Query psy9770
Match_columns 811
No_of_seqs 1245 out of 3868
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 19:10:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9770.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9770hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 7.4E-62 2.5E-66 566.2 65.2 487 261-801 19-610 (611)
2 2ymu_A WD-40 repeat protein; u 100.0 4.3E-61 1.5E-65 557.0 67.6 476 261-799 17-577 (577)
3 2ymu_A WD-40 repeat protein; u 100.0 1E-57 3.5E-62 528.6 64.9 480 290-801 7-538 (577)
4 1nr0_A Actin interacting prote 100.0 3.9E-56 1.3E-60 518.0 61.6 455 261-734 60-610 (611)
5 1pgu_A Actin interacting prote 100.0 9.9E-55 3.4E-59 507.2 62.9 482 261-802 19-614 (615)
6 3sfz_A APAF-1, apoptotic pepti 100.0 4.7E-55 1.6E-59 552.1 57.7 520 261-801 616-1248(1249)
7 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-52 3.7E-57 506.7 53.0 531 254-809 13-790 (902)
8 3sfz_A APAF-1, apoptotic pepti 100.0 9.4E-51 3.2E-55 512.9 57.8 460 293-809 609-1165(1249)
9 2oaj_A Protein SNI1; WD40 repe 100.0 8.1E-51 2.8E-55 490.4 53.0 469 295-806 13-668 (902)
10 1pgu_A Actin interacting prote 100.0 3.3E-48 1.1E-52 452.1 58.1 446 261-735 64-614 (615)
11 3mkq_A Coatomer beta'-subunit; 100.0 2.8E-45 9.5E-50 442.4 48.6 437 291-798 5-501 (814)
12 3mkq_A Coatomer beta'-subunit; 100.0 8.6E-45 2.9E-49 438.1 50.0 497 261-802 14-601 (814)
13 1got_B GT-beta; complex (GTP-b 100.0 2.3E-40 7.9E-45 356.0 43.6 291 291-686 47-340 (340)
14 3ow8_A WD repeat-containing pr 100.0 6.4E-41 2.2E-45 356.9 38.3 284 446-801 29-320 (321)
15 1vyh_C Platelet-activating fac 100.0 6.5E-41 2.2E-45 369.9 37.8 283 446-800 105-409 (410)
16 1r5m_A SIR4-interacting protei 100.0 4.8E-40 1.6E-44 364.0 40.5 348 281-688 26-424 (425)
17 1vyh_C Platelet-activating fac 100.0 5.6E-40 1.9E-44 362.4 36.9 307 292-646 101-410 (410)
18 3ow8_A WD repeat-containing pr 100.0 3.7E-39 1.3E-43 343.3 41.8 291 392-734 24-320 (321)
19 1r5m_A SIR4-interacting protei 100.0 3.5E-39 1.2E-43 357.1 41.4 351 376-734 24-424 (425)
20 2pbi_B Guanine nucleotide-bind 100.0 1E-38 3.5E-43 345.0 41.9 293 291-686 56-354 (354)
21 1got_B GT-beta; complex (GTP-b 100.0 1E-38 3.5E-43 343.2 41.4 283 445-732 51-340 (340)
22 4g56_B MGC81050 protein; prote 100.0 1.7E-39 5.7E-44 351.5 34.1 317 454-805 10-346 (357)
23 2pbi_B Guanine nucleotide-bind 100.0 1.5E-38 5.1E-43 343.6 41.2 289 445-799 60-354 (354)
24 4g56_B MGC81050 protein; prote 100.0 1.5E-39 5.2E-44 351.8 32.4 321 356-738 10-346 (357)
25 2pm9_A Protein WEB1, protein t 100.0 1.2E-39 4E-44 360.5 32.1 359 402-803 14-415 (416)
26 3iz6_a 40S ribosomal protein R 100.0 3.5E-39 1.2E-43 352.4 35.5 299 446-805 63-378 (380)
27 3iz6_a 40S ribosomal protein R 100.0 1.6E-39 5.6E-44 355.0 32.4 311 330-690 47-376 (380)
28 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.1E-38 7.1E-43 341.4 40.6 307 446-808 12-341 (345)
29 4gqb_B Methylosome protein 50; 100.0 5.4E-39 1.8E-43 344.8 34.7 304 379-737 16-333 (344)
30 2ynn_A Coatomer subunit beta'; 100.0 4.3E-38 1.5E-42 332.6 40.4 291 291-647 5-302 (304)
31 3frx_A Guanine nucleotide-bind 100.0 3.1E-38 1.1E-42 336.1 38.5 293 445-803 13-318 (319)
32 1gxr_A ESG1, transducin-like e 100.0 4.7E-38 1.6E-42 336.6 39.5 326 298-688 8-336 (337)
33 1erj_A Transcriptional repress 100.0 3E-38 1E-42 346.7 37.3 291 447-805 62-392 (393)
34 1k32_A Tricorn protease; prote 100.0 6.4E-37 2.2E-41 378.0 53.7 499 249-804 3-639 (1045)
35 2ynn_A Coatomer subunit beta'; 100.0 7.6E-38 2.6E-42 330.6 38.9 290 392-735 5-302 (304)
36 4gqb_B Methylosome protein 50; 100.0 2.5E-38 8.5E-43 339.7 35.4 298 472-805 16-334 (344)
37 3frx_A Guanine nucleotide-bind 100.0 1.7E-37 5.7E-42 330.4 41.1 294 293-690 11-318 (319)
38 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-37 4.8E-42 334.9 40.9 306 392-741 7-341 (345)
39 1gxr_A ESG1, transducin-like e 100.0 6.7E-38 2.3E-42 335.3 37.3 325 350-733 8-335 (337)
40 4ery_A WD repeat-containing pr 100.0 1.4E-36 4.6E-41 322.3 41.6 285 446-802 20-312 (312)
41 2pm9_A Protein WEB1, protein t 100.0 4.9E-39 1.7E-43 355.5 23.5 334 299-690 12-415 (416)
42 2hes_X YDR267CP; beta-propelle 100.0 4.9E-37 1.7E-41 328.5 37.7 296 446-802 11-328 (330)
43 4ery_A WD repeat-containing pr 100.0 2.6E-36 8.9E-41 320.1 41.1 289 392-734 15-311 (312)
44 3vl1_A 26S proteasome regulato 100.0 8.3E-38 2.8E-42 346.3 29.8 346 301-735 58-419 (420)
45 2xzm_R RACK1; ribosome, transl 100.0 3.1E-36 1.1E-40 324.2 39.7 297 392-690 13-341 (343)
46 2xzm_R RACK1; ribosome, transl 100.0 5.7E-36 1.9E-40 322.2 39.3 289 293-607 15-341 (343)
47 1erj_A Transcriptional repress 100.0 9.5E-36 3.3E-40 326.7 41.6 291 396-735 60-389 (393)
48 4aow_A Guanine nucleotide-bind 100.0 2.4E-35 8.1E-40 316.3 42.3 306 331-691 18-339 (340)
49 2j04_B YDR362CP, TAU91; beta p 100.0 2.4E-37 8.3E-42 348.9 27.2 352 296-735 130-517 (524)
50 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.1E-35 1.4E-39 327.6 44.0 317 293-690 112-443 (445)
51 3zwl_B Eukaryotic translation 100.0 5E-35 1.7E-39 317.1 42.9 301 293-690 26-347 (369)
52 3gre_A Serine/threonine-protei 100.0 1.1E-36 3.8E-41 339.3 30.1 352 267-732 34-437 (437)
53 3v7d_B Cell division control p 100.0 4.3E-35 1.5E-39 329.2 42.2 327 292-687 114-461 (464)
54 2hes_X YDR267CP; beta-propelle 100.0 1.9E-35 6.6E-40 316.1 37.0 297 292-606 7-328 (330)
55 3i2n_A WD repeat-containing pr 100.0 2.3E-35 7.9E-40 318.5 37.0 301 394-738 12-356 (357)
56 4aow_A Guanine nucleotide-bind 100.0 7.5E-35 2.6E-39 312.3 39.4 289 293-608 32-339 (340)
57 3vl1_A 26S proteasome regulato 100.0 5.6E-35 1.9E-39 323.5 38.4 321 263-606 59-419 (420)
58 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.4E-34 4.8E-39 323.2 40.9 322 338-735 107-442 (445)
59 3v7d_B Cell division control p 100.0 3.6E-34 1.2E-38 321.6 43.8 345 392-800 113-461 (464)
60 3zwl_B Eukaryotic translation 100.0 3.5E-34 1.2E-38 310.4 41.7 306 392-742 24-353 (369)
61 2j04_B YDR362CP, TAU91; beta p 100.0 4E-36 1.4E-40 339.0 27.3 316 458-803 170-518 (524)
62 3k26_A Polycomb protein EED; W 100.0 3.8E-35 1.3E-39 317.8 34.1 293 446-801 15-365 (366)
63 3k26_A Polycomb protein EED; W 100.0 3.3E-35 1.1E-39 318.3 33.4 296 396-735 14-366 (366)
64 3gre_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 335.3 26.2 372 306-799 34-437 (437)
65 4h5i_A Guanine nucleotide-exch 100.0 1.2E-34 4E-39 314.3 36.1 288 491-804 14-345 (365)
66 1sq9_A Antiviral protein SKI8; 100.0 1.3E-34 4.4E-39 317.9 36.4 307 392-737 8-397 (397)
67 1sq9_A Antiviral protein SKI8; 100.0 2.4E-34 8.2E-39 315.8 36.7 309 292-649 9-397 (397)
68 3ei3_B DNA damage-binding prot 100.0 1.9E-34 6.3E-39 315.3 34.8 300 474-802 57-382 (383)
69 3ei3_B DNA damage-binding prot 100.0 1.7E-34 5.7E-39 315.7 34.1 288 392-735 65-382 (383)
70 1k8k_C P40, ARP2/3 complex 41 100.0 3.1E-34 1.1E-38 311.7 34.2 291 447-739 6-365 (372)
71 3odt_A Protein DOA1; ubiquitin 100.0 1.6E-33 5.5E-38 298.0 37.4 285 446-741 15-302 (313)
72 4a11_B DNA excision repair pro 100.0 3.6E-34 1.2E-38 315.1 33.4 349 375-802 21-405 (408)
73 3dm0_A Maltose-binding peripla 100.0 1.5E-33 5E-38 333.3 40.9 292 342-688 375-692 (694)
74 3dm0_A Maltose-binding peripla 100.0 2.1E-33 7.1E-38 332.0 41.6 288 293-646 376-692 (694)
75 3i2n_A WD repeat-containing pr 100.0 3.3E-34 1.1E-38 309.4 31.5 312 446-805 15-356 (357)
76 3dwl_C Actin-related protein 2 100.0 3.6E-35 1.2E-39 320.1 23.8 311 448-800 10-377 (377)
77 2pm7_B Protein transport prote 100.0 2.5E-33 8.5E-38 294.9 34.2 254 489-802 7-285 (297)
78 4gga_A P55CDC, cell division c 100.0 5.3E-33 1.8E-37 307.9 38.2 284 301-690 107-396 (420)
79 1k8k_C P40, ARP2/3 complex 41 100.0 1.9E-33 6.7E-38 305.4 33.6 291 295-608 4-363 (372)
80 4h5i_A Guanine nucleotide-exch 100.0 1.8E-33 6.2E-38 305.0 32.8 308 299-690 14-344 (365)
81 4e54_B DNA damage-binding prot 100.0 4.7E-34 1.6E-38 317.8 27.9 289 489-806 117-434 (435)
82 4a11_B DNA excision repair pro 100.0 2E-33 6.9E-38 309.1 32.3 359 330-735 24-405 (408)
83 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-32 5.8E-37 290.1 38.0 294 292-617 11-307 (313)
84 2j04_A TAU60, YPL007P, hypothe 100.0 9.2E-35 3.1E-39 318.7 20.8 320 349-791 13-350 (588)
85 4e54_B DNA damage-binding prot 100.0 1.4E-33 4.8E-38 313.9 30.6 293 393-738 112-433 (435)
86 4aez_A CDC20, WD repeat-contai 100.0 2.2E-32 7.6E-37 300.9 38.4 285 451-742 95-387 (401)
87 4ggc_A P55CDC, cell division c 100.0 5.8E-32 2E-36 286.8 39.3 282 302-690 28-316 (318)
88 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-34 3.9E-39 318.0 17.5 320 298-677 14-349 (588)
89 2pm7_B Protein transport prote 100.0 2.8E-32 9.7E-37 286.9 34.9 247 446-734 6-284 (297)
90 3dwl_C Actin-related protein 2 100.0 7.3E-34 2.5E-38 309.8 23.4 292 394-733 5-377 (377)
91 1k32_A Tricorn protease; prote 100.0 2E-31 6.7E-36 329.1 48.1 473 298-805 13-603 (1045)
92 4gga_A P55CDC, cell division c 100.0 1.2E-31 4.2E-36 296.9 41.2 286 262-612 107-401 (420)
93 4aez_A CDC20, WD repeat-contai 100.0 2.3E-32 7.9E-37 300.8 34.1 284 349-692 89-383 (401)
94 1yfq_A Cell cycle arrest prote 100.0 2.3E-32 7.7E-37 293.4 31.5 281 446-800 8-322 (342)
95 3dw8_B Serine/threonine-protei 100.0 2.2E-32 7.4E-37 305.3 31.2 343 447-800 26-444 (447)
96 4ggc_A P55CDC, cell division c 100.0 2.7E-30 9.1E-35 274.0 40.7 280 263-607 28-316 (318)
97 3bg1_A Protein SEC13 homolog; 100.0 7.6E-32 2.6E-36 286.3 28.4 257 293-605 7-292 (316)
98 3dw8_B Serine/threonine-protei 100.0 1E-31 3.5E-36 299.8 30.4 303 297-645 26-444 (447)
99 3jrp_A Fusion protein of prote 100.0 1.7E-31 6E-36 290.5 31.1 261 481-802 2-287 (379)
100 1p22_A F-BOX/WD-repeat protein 100.0 7.9E-31 2.7E-35 291.8 36.0 279 446-740 130-419 (435)
101 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-31 4.7E-36 287.0 28.0 301 446-809 8-344 (351)
102 1yfq_A Cell cycle arrest prote 100.0 8E-31 2.7E-35 281.3 33.1 290 394-732 5-321 (342)
103 3mmy_A MRNA export factor; mRN 100.0 7.8E-31 2.7E-35 283.9 32.8 302 475-805 24-349 (368)
104 3bg1_A Protein SEC13 homolog; 100.0 8E-32 2.7E-36 286.1 23.6 247 488-734 10-292 (316)
105 3jrp_A Fusion protein of prote 100.0 2.1E-30 7.2E-35 281.9 34.6 250 446-736 8-288 (379)
106 2aq5_A Coronin-1A; WD40 repeat 100.0 4E-31 1.4E-35 291.0 26.9 290 452-804 37-344 (402)
107 3f3f_A Nucleoporin SEH1; struc 100.0 2.7E-30 9.2E-35 276.9 32.7 310 394-740 5-342 (351)
108 1p22_A F-BOX/WD-repeat protein 100.0 3.3E-30 1.1E-34 286.8 33.7 293 296-625 130-433 (435)
109 3vu4_A KMHSV2; beta-propeller 100.0 2.7E-30 9.3E-35 279.0 32.0 314 474-806 3-340 (355)
110 3mmy_A MRNA export factor; mRN 100.0 3.6E-30 1.2E-34 278.7 32.8 293 382-734 24-345 (368)
111 2aq5_A Coronin-1A; WD40 repeat 100.0 3.1E-30 1.1E-34 283.8 31.2 286 403-737 37-344 (402)
112 1l0q_A Surface layer protein; 100.0 1.4E-28 4.9E-33 269.2 41.6 331 311-722 2-365 (391)
113 3bws_A Protein LP49; two-domai 100.0 2.5E-28 8.4E-33 271.3 43.8 308 373-735 95-432 (433)
114 1l0q_A Surface layer protein; 100.0 2.3E-28 8E-33 267.6 41.4 308 367-738 4-345 (391)
115 3bws_A Protein LP49; two-domai 100.0 2.5E-28 8.5E-33 271.3 40.0 299 281-647 102-432 (433)
116 3lrv_A PRE-mRNA-splicing facto 100.0 4.5E-30 1.6E-34 276.0 24.7 273 457-800 44-331 (343)
117 3jro_A Fusion protein of prote 100.0 1.4E-29 4.7E-34 301.1 30.4 318 446-804 6-378 (753)
118 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.7E-28 5.8E-33 274.3 36.8 327 300-691 5-393 (450)
119 3vu4_A KMHSV2; beta-propeller 100.0 9.6E-29 3.3E-33 266.8 33.3 304 333-691 3-338 (355)
120 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2E-28 6.8E-33 273.7 36.5 283 450-734 5-390 (450)
121 2w18_A PALB2, fancn, partner a 100.0 4E-28 1.4E-32 250.3 35.3 300 338-733 24-355 (356)
122 3jro_A Fusion protein of prote 100.0 3E-29 1E-33 298.2 30.0 259 485-804 4-287 (753)
123 3lrv_A PRE-mRNA-splicing facto 100.0 9.2E-29 3.1E-33 265.8 24.9 272 364-734 47-332 (343)
124 4gq1_A NUP37; propeller, trans 100.0 7.6E-29 2.6E-33 271.6 24.3 245 489-800 87-387 (393)
125 2xyi_A Probable histone-bindin 100.0 2.7E-27 9.2E-32 262.7 32.3 266 472-737 109-412 (430)
126 2w18_A PALB2, fancn, partner a 100.0 6.3E-27 2.2E-31 241.4 32.1 276 313-687 56-355 (356)
127 4gq1_A NUP37; propeller, trans 100.0 7.9E-28 2.7E-32 263.6 25.8 236 451-734 91-388 (393)
128 1nir_A Nitrite reductase; hemo 100.0 2.3E-26 7.7E-31 261.5 36.8 327 359-743 145-522 (543)
129 2xyi_A Probable histone-bindin 100.0 7.6E-27 2.6E-31 259.1 31.3 251 349-607 126-411 (430)
130 1nir_A Nitrite reductase; hemo 100.0 2.3E-25 7.7E-30 253.3 38.7 333 306-657 144-524 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.3E-25 4.4E-30 247.5 28.0 302 351-717 62-410 (415)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.7E-25 3E-29 240.8 31.3 279 492-803 63-388 (415)
133 2ecf_A Dipeptidyl peptidase IV 99.9 7.6E-25 2.6E-29 260.9 32.6 318 449-802 36-459 (741)
134 2ecf_A Dipeptidyl peptidase IV 99.9 1.9E-24 6.5E-29 257.5 31.1 353 351-736 36-460 (741)
135 1xfd_A DIP, dipeptidyl aminope 99.9 8.1E-25 2.8E-29 259.9 23.0 350 263-678 19-429 (723)
136 2z3z_A Dipeptidyl aminopeptida 99.9 1.5E-23 5.1E-28 248.3 33.5 352 263-687 28-474 (706)
137 2z3z_A Dipeptidyl aminopeptida 99.9 2.4E-23 8.3E-28 246.4 32.8 313 452-804 28-437 (706)
138 1xfd_A DIP, dipeptidyl aminope 99.9 6.7E-24 2.3E-28 252.0 26.2 360 352-737 17-445 (723)
139 3u4y_A Uncharacterized protein 99.9 5.3E-22 1.8E-26 211.6 34.0 288 456-804 4-306 (331)
140 1ri6_A Putative isomerase YBHE 99.9 5.6E-22 1.9E-26 212.1 33.4 269 465-737 10-312 (343)
141 1pby_B Quinohemoprotein amine 99.9 2E-22 6.9E-27 215.0 26.6 276 463-809 4-317 (337)
142 3u4y_A Uncharacterized protein 99.9 2.5E-21 8.4E-26 206.4 33.8 279 358-690 4-305 (331)
143 2ojh_A Uncharacterized protein 99.9 7.4E-22 2.5E-26 205.9 27.5 254 465-726 17-293 (297)
144 1ri6_A Putative isomerase YBHE 99.9 2.1E-21 7.2E-26 207.6 31.2 272 505-801 7-307 (343)
145 3vgz_A Uncharacterized protein 99.9 5.2E-21 1.8E-25 205.6 33.1 275 451-792 42-334 (353)
146 3vgz_A Uncharacterized protein 99.9 1.9E-20 6.6E-25 201.1 34.3 280 298-638 39-335 (353)
147 1pby_B Quinohemoprotein amine 99.9 5.6E-21 1.9E-25 203.7 28.1 295 312-657 2-320 (337)
148 2ojh_A Uncharacterized protein 99.9 6.5E-21 2.2E-25 198.7 26.5 256 508-793 17-293 (297)
149 1z68_A Fibroblast activation p 99.9 1.1E-21 3.9E-26 232.5 22.1 356 356-739 20-447 (719)
150 3hfq_A Uncharacterized protein 99.9 8.4E-20 2.9E-24 196.0 33.5 272 511-805 14-322 (347)
151 3scy_A Hypothetical bacterial 99.9 4.1E-19 1.4E-23 191.8 37.8 269 468-739 25-343 (361)
152 1z68_A Fibroblast activation p 99.9 1.1E-20 3.8E-25 224.1 25.4 322 453-805 19-446 (719)
153 1jmx_B Amine dehydrogenase; ox 99.9 5E-20 1.7E-24 197.5 27.4 301 304-657 4-335 (349)
154 3o4h_A Acylamino-acid-releasin 99.9 1.7E-20 5.8E-25 216.6 24.8 268 489-801 19-314 (582)
155 3hfq_A Uncharacterized protein 99.9 2.8E-19 9.7E-24 191.9 32.1 269 469-739 15-323 (347)
156 3o4h_A Acylamino-acid-releasin 99.9 1.9E-20 6.7E-25 216.1 24.1 268 450-735 22-315 (582)
157 1jmx_B Amine dehydrogenase; ox 99.9 4.6E-20 1.6E-24 197.7 25.3 286 454-809 4-332 (349)
158 4a5s_A Dipeptidyl peptidase 4 99.8 1.3E-18 4.5E-23 206.5 38.1 368 263-655 19-457 (740)
159 4a5s_A Dipeptidyl peptidase 4 99.8 3.3E-19 1.1E-23 211.6 28.5 361 350-739 15-453 (740)
160 3scy_A Hypothetical bacterial 99.8 4.1E-18 1.4E-22 183.9 33.8 313 308-667 10-360 (361)
161 3pe7_A Oligogalacturonate lyas 99.8 3.2E-19 1.1E-23 194.6 23.2 272 455-734 41-381 (388)
162 3pe7_A Oligogalacturonate lyas 99.8 1.3E-18 4.6E-23 189.6 25.5 298 331-689 12-382 (388)
163 2oit_A Nucleoporin 214KDA; NH2 99.8 5.9E-19 2E-23 194.9 19.0 206 575-804 36-280 (434)
164 2oit_A Nucleoporin 214KDA; NH2 99.8 1.6E-17 5.5E-22 183.4 29.8 201 263-480 39-279 (434)
165 3c5m_A Oligogalacturonate lyas 99.8 3.2E-18 1.1E-22 187.0 23.7 314 283-688 13-381 (396)
166 2oiz_A Aromatic amine dehydrog 99.8 2.5E-17 8.5E-22 177.4 30.1 292 330-671 32-360 (361)
167 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.4E-17 4.7E-22 180.1 27.1 268 513-803 14-342 (365)
168 1jof_A Carboxy-CIS,CIS-muconat 99.8 8.4E-17 2.9E-21 173.9 30.9 271 463-736 5-342 (365)
169 3c5m_A Oligogalacturonate lyas 99.8 4.3E-18 1.5E-22 185.9 20.1 325 380-802 13-382 (396)
170 2oiz_A Aromatic amine dehydrog 99.8 4.6E-16 1.6E-20 167.5 32.3 297 270-629 13-360 (361)
171 4a2l_A BT_4663, two-component 99.8 2.2E-13 7.6E-18 162.8 57.5 483 263-803 90-615 (795)
172 3azo_A Aminopeptidase; POP fam 99.7 1.3E-16 4.3E-21 187.2 26.7 333 294-687 18-409 (662)
173 3azo_A Aminopeptidase; POP fam 99.7 7.1E-16 2.4E-20 180.8 29.2 330 349-732 21-408 (662)
174 1qks_A Cytochrome CD1 nitrite 99.7 4.8E-14 1.6E-18 159.5 41.3 330 308-657 164-548 (567)
175 1qks_A Cytochrome CD1 nitrite 99.7 3E-14 1E-18 161.2 38.7 324 365-743 167-546 (567)
176 3fvz_A Peptidyl-glycine alpha- 99.7 8.5E-15 2.9E-19 155.6 31.8 239 449-689 23-322 (329)
177 1q7f_A NHL, brain tumor CG1071 99.7 7E-15 2.4E-19 152.8 29.9 242 533-806 27-284 (286)
178 2gop_A Trilobed protease; beta 99.7 4.2E-15 1.4E-19 159.1 28.7 268 264-575 18-340 (347)
179 1q7f_A NHL, brain tumor CG1071 99.7 1.2E-14 4.3E-19 150.9 31.2 239 489-736 27-281 (286)
180 2dg1_A DRP35, lactonase; beta 99.7 8E-15 2.7E-19 156.0 30.2 268 401-680 6-301 (333)
181 3fvz_A Peptidyl-glycine alpha- 99.7 6.5E-15 2.2E-19 156.5 28.6 238 491-735 23-322 (329)
182 4a2l_A BT_4663, two-component 99.7 5.6E-12 1.9E-16 150.7 56.5 440 263-737 133-616 (795)
183 3v9f_A Two-component system se 99.7 2.8E-11 9.6E-16 144.3 59.9 486 263-802 68-611 (781)
184 2dg1_A DRP35, lactonase; beta 99.7 2.3E-14 8E-19 152.4 29.6 263 451-725 7-300 (333)
185 2z2n_A Virginiamycin B lyase; 99.7 7.8E-13 2.7E-17 137.8 38.9 277 450-737 15-297 (299)
186 2z2n_A Virginiamycin B lyase; 99.7 7.9E-13 2.7E-17 137.7 38.8 281 489-804 12-297 (299)
187 2gop_A Trilobed protease; beta 99.7 1.2E-14 4.3E-19 155.4 25.6 254 493-801 16-330 (347)
188 3dsm_A Uncharacterized protein 99.7 3.8E-14 1.3E-18 150.4 28.4 267 510-809 14-308 (328)
189 3sjl_D Methylamine dehydrogena 99.6 1.6E-13 5.6E-18 145.5 30.0 296 268-627 40-384 (386)
190 3dsm_A Uncharacterized protein 99.6 1.2E-13 4.1E-18 146.5 28.5 264 468-742 15-308 (328)
191 2mad_H Methylamine dehydrogena 99.6 3.1E-12 1.1E-16 137.6 39.7 296 269-654 29-357 (373)
192 3e5z_A Putative gluconolactona 99.6 8.2E-14 2.8E-18 145.5 25.7 232 449-689 27-286 (296)
193 3e5z_A Putative gluconolactona 99.6 4.6E-13 1.6E-17 139.8 29.8 236 489-738 25-289 (296)
194 3v9f_A Two-component system se 99.6 4E-10 1.4E-14 134.3 59.2 491 263-804 21-570 (781)
195 1rwi_B Serine/threonine-protei 99.6 2.7E-13 9.2E-18 139.3 27.1 240 493-738 25-267 (270)
196 2xdw_A Prolyl endopeptidase; a 99.6 3.9E-13 1.3E-17 158.6 32.0 294 410-737 81-416 (710)
197 1rwi_B Serine/threonine-protei 99.6 3.2E-13 1.1E-17 138.7 26.3 240 537-806 25-268 (270)
198 2qc5_A Streptogramin B lactona 99.6 1.3E-11 4.4E-16 128.6 38.1 274 450-734 20-299 (300)
199 2xdw_A Prolyl endopeptidase; a 99.6 4.5E-13 1.5E-17 158.1 29.8 274 459-804 81-416 (710)
200 2bkl_A Prolyl endopeptidase; m 99.6 2.2E-13 7.4E-18 160.4 25.9 281 410-737 77-399 (695)
201 3sjl_D Methylamine dehydrogena 99.6 2.8E-12 9.6E-17 136.0 30.5 301 357-669 38-384 (386)
202 3no2_A Uncharacterized protein 99.6 9.3E-13 3.2E-17 135.6 25.8 189 544-742 3-202 (276)
203 2qc5_A Streptogramin B lactona 99.5 2.6E-11 9E-16 126.2 36.9 275 490-800 18-298 (300)
204 2mad_H Methylamine dehydrogena 99.5 1.1E-11 3.7E-16 133.3 34.5 267 471-808 48-356 (373)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 3.5E-12 1.2E-16 134.0 28.4 238 491-735 17-299 (314)
206 3no2_A Uncharacterized protein 99.5 3.4E-12 1.2E-16 131.4 26.2 213 459-677 4-231 (276)
207 2bkl_A Prolyl endopeptidase; m 99.5 1.8E-12 6.3E-17 152.4 25.7 287 308-610 76-401 (695)
208 1yr2_A Prolyl oligopeptidase; 99.5 7.6E-12 2.6E-16 148.2 30.5 292 409-737 115-443 (741)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2E-11 6.8E-16 128.3 30.0 241 533-802 15-299 (314)
210 3c75_H MADH, methylamine dehyd 99.5 3.3E-12 1.1E-16 138.0 22.1 274 330-654 100-409 (426)
211 3c75_H MADH, methylamine dehyd 99.4 4E-12 1.4E-16 137.4 21.6 273 470-809 99-409 (426)
212 1yr2_A Prolyl oligopeptidase; 99.4 1.9E-11 6.4E-16 144.9 26.3 239 537-804 164-443 (741)
213 3g4e_A Regucalcin; six bladed 99.4 2.6E-10 8.9E-15 118.9 31.4 229 264-510 16-260 (297)
214 3q7m_A Lipoprotein YFGL, BAMB; 99.4 4.7E-10 1.6E-14 121.2 32.8 297 460-799 53-375 (376)
215 3q7m_A Lipoprotein YFGL, BAMB; 99.4 1.7E-10 5.8E-15 124.8 28.7 296 364-686 53-375 (376)
216 3hxj_A Pyrrolo-quinoline quino 99.4 4.4E-11 1.5E-15 126.6 23.0 303 454-805 24-327 (330)
217 3g4e_A Regucalcin; six bladed 99.3 7.3E-10 2.5E-14 115.4 30.5 222 451-678 14-261 (297)
218 1kb0_A Quinohemoprotein alcoho 99.3 1.1E-10 3.9E-15 135.6 26.7 276 460-742 77-514 (677)
219 3hrp_A Uncharacterized protein 99.3 2.4E-10 8.1E-15 124.7 26.9 248 536-801 131-409 (409)
220 3hrp_A Uncharacterized protein 99.3 5.4E-10 1.9E-14 121.8 29.3 233 450-687 131-408 (409)
221 2ghs_A AGR_C_1268P; regucalcin 99.3 1.7E-09 5.9E-14 114.2 31.4 220 452-679 51-292 (326)
222 2ghs_A AGR_C_1268P; regucalcin 99.3 1.1E-09 3.9E-14 115.6 29.8 218 494-723 51-290 (326)
223 3dr2_A Exported gluconolactona 99.3 3.9E-10 1.3E-14 118.0 26.0 231 534-800 43-304 (305)
224 1yiq_A Quinohemoprotein alcoho 99.3 4.1E-10 1.4E-14 131.1 27.8 274 460-741 70-511 (689)
225 1xip_A Nucleoporin NUP159; bet 99.3 1.9E-11 6.5E-16 130.2 15.1 179 577-788 39-230 (388)
226 1kb0_A Quinohemoprotein alcoho 99.3 7.3E-10 2.5E-14 128.8 29.5 335 312-675 78-536 (677)
227 3hxj_A Pyrrolo-quinoline quino 99.3 3.7E-11 1.3E-15 127.2 16.6 294 364-689 30-324 (330)
228 3dr2_A Exported gluconolactona 99.3 5.5E-10 1.9E-14 116.8 25.2 227 450-686 45-303 (305)
229 1yiq_A Quinohemoprotein alcoho 99.3 7.7E-10 2.6E-14 128.9 28.8 405 247-676 46-536 (689)
230 4a0p_A LRP6, LRP-6, low-densit 99.3 9E-06 3.1E-10 93.0 61.9 434 270-735 5-508 (628)
231 1mda_H Methylamine dehydrogena 99.3 3.7E-11 1.3E-15 127.7 14.7 278 330-667 47-365 (368)
232 1xip_A Nucleoporin NUP159; bet 99.3 9.2E-11 3.2E-15 124.9 17.4 171 301-508 39-230 (388)
233 3iuj_A Prolyl endopeptidase; h 99.2 8.7E-10 3E-14 129.3 25.7 249 448-737 127-407 (693)
234 3s94_A LRP-6, low-density lipo 99.2 5.8E-06 2E-10 94.5 56.4 434 274-735 12-510 (619)
235 3s94_A LRP-6, low-density lipo 99.2 2.1E-06 7.1E-11 98.2 52.5 445 264-737 43-553 (619)
236 1mda_H Methylamine dehydrogena 99.2 1.9E-10 6.6E-15 122.2 17.8 262 471-809 47-353 (368)
237 2qe8_A Uncharacterized protein 99.2 7.4E-10 2.5E-14 118.0 20.5 254 262-552 18-307 (343)
238 3iuj_A Prolyl endopeptidase; h 99.2 9.1E-10 3.1E-14 129.1 23.0 242 489-804 126-407 (693)
239 2qe8_A Uncharacterized protein 99.2 4.8E-10 1.6E-14 119.5 18.6 269 352-685 17-317 (343)
240 2ece_A 462AA long hypothetical 99.1 4.8E-08 1.6E-12 104.1 30.8 267 330-635 44-399 (462)
241 4a0p_A LRP6, LRP-6, low-densit 99.1 3.9E-05 1.3E-09 87.7 59.4 444 264-739 40-553 (628)
242 3ott_A Two-component system se 99.1 5.2E-05 1.8E-09 89.7 56.6 430 270-737 111-588 (758)
243 1kv9_A Type II quinohemoprotei 99.0 5.9E-08 2E-12 112.6 28.2 276 460-742 66-495 (668)
244 2hz6_A Endoplasmic reticulum t 99.0 2.7E-11 9.2E-16 130.4 -0.1 185 586-807 8-197 (369)
245 1kv9_A Type II quinohemoprotei 99.0 1E-07 3.5E-12 110.6 29.1 296 374-677 73-520 (668)
246 2hz6_A Endoplasmic reticulum t 99.0 2.2E-10 7.4E-15 123.3 5.7 256 460-735 9-279 (369)
247 2ece_A 462AA long hypothetical 99.0 8.8E-08 3E-12 102.1 25.2 249 253-510 74-399 (462)
248 3ott_A Two-component system se 99.0 4.2E-05 1.4E-09 90.5 51.3 431 264-735 149-626 (758)
249 2ad6_A Methanol dehydrogenase 99.0 5E-08 1.7E-12 110.8 24.2 275 460-741 62-500 (571)
250 1fwx_A Nitrous oxide reductase 99.0 5.9E-08 2E-12 107.1 23.7 273 463-737 18-433 (595)
251 1w6s_A Methanol dehydrogenase 99.0 8.4E-07 2.9E-11 100.6 33.2 277 460-741 62-509 (599)
252 2iwa_A Glutamine cyclotransfer 98.9 5.5E-08 1.9E-12 97.6 19.5 208 577-804 22-239 (266)
253 3ei3_A DNA damage-binding prot 98.9 0.00049 1.7E-08 84.0 57.2 469 300-803 426-1000(1158)
254 1npe_A Nidogen, entactin; glyc 98.9 2E-06 6.8E-11 87.6 31.0 217 450-671 36-263 (267)
255 1flg_A Protein (quinoprotein e 98.9 8.7E-07 3E-11 100.7 30.4 275 460-741 68-522 (582)
256 2fp8_A Strictosidine synthase; 98.9 5.6E-07 1.9E-11 94.6 25.8 235 493-735 20-313 (322)
257 2ad6_A Methanol dehydrogenase 98.9 4.3E-07 1.5E-11 103.2 26.5 293 374-675 69-523 (571)
258 1npe_A Nidogen, entactin; glyc 98.9 4.3E-06 1.5E-10 85.0 31.7 228 272-525 1-241 (267)
259 2fp8_A Strictosidine synthase; 98.9 1.5E-06 5.1E-11 91.3 28.8 235 452-690 21-314 (322)
260 1w6s_A Methanol dehydrogenase 98.8 7.1E-07 2.4E-11 101.2 26.5 291 374-671 69-528 (599)
261 1flg_A Protein (quinoprotein e 98.8 1.3E-06 4.5E-11 99.2 28.4 289 379-676 80-547 (582)
262 3nol_A Glutamine cyclotransfer 98.8 1.8E-07 6E-12 92.6 17.5 192 578-791 45-244 (262)
263 1fwx_A Nitrous oxide reductase 98.8 1.8E-07 6E-12 103.3 19.4 229 459-690 99-432 (595)
264 3ei3_A DNA damage-binding prot 98.8 0.0013 4.4E-08 80.3 55.9 429 273-733 525-1060(1158)
265 2iwa_A Glutamine cyclotransfer 98.8 1.1E-06 3.7E-11 88.2 22.6 204 480-690 9-238 (266)
266 2xbg_A YCF48-like protein; pho 98.6 5.1E-05 1.7E-09 79.6 31.8 273 450-733 36-320 (327)
267 1k3i_A Galactose oxidase precu 98.6 1.5E-06 5.2E-11 100.9 21.2 268 454-724 190-530 (656)
268 3mbr_X Glutamine cyclotransfer 98.6 3E-06 1E-10 83.1 19.8 191 577-793 22-226 (243)
269 3v64_C Agrin; beta propeller, 98.6 0.00012 4.1E-09 77.4 32.9 237 263-524 36-277 (349)
270 2p4o_A Hypothetical protein; p 98.6 3E-05 1E-09 80.6 27.4 224 450-680 32-279 (306)
271 3nok_A Glutaminyl cyclase; bet 98.5 1.4E-06 4.7E-11 86.2 15.6 194 578-793 57-257 (268)
272 2p4o_A Hypothetical protein; p 98.5 7.1E-05 2.4E-09 77.7 29.8 224 492-791 32-277 (306)
273 3nol_A Glutamine cyclotransfer 98.5 2.2E-05 7.7E-10 77.6 23.8 190 481-678 32-244 (262)
274 3nok_A Glutaminyl cyclase; bet 98.5 2.7E-05 9.1E-10 77.0 24.0 190 481-678 44-254 (268)
275 3v65_B Low-density lipoprotein 98.5 0.0001 3.6E-09 79.1 31.1 236 265-525 81-321 (386)
276 2xbg_A YCF48-like protein; pho 98.5 0.00031 1.1E-08 73.5 32.7 272 490-799 34-319 (327)
277 1k3i_A Galactose oxidase precu 98.4 1.1E-05 3.9E-10 93.5 21.9 240 496-737 190-499 (656)
278 4hw6_A Hypothetical protein, I 98.4 4.8E-05 1.6E-09 83.0 25.0 256 537-801 140-432 (433)
279 3mbr_X Glutamine cyclotransfer 98.4 0.00014 4.9E-09 71.2 25.6 190 481-678 10-223 (243)
280 3tc9_A Hypothetical hydrolase; 98.4 5E-05 1.7E-09 82.9 24.4 152 537-689 138-301 (430)
281 1ijq_A LDL receptor, low-densi 98.3 0.00069 2.4E-08 70.5 31.4 228 274-525 4-241 (316)
282 3p5b_L Low density lipoprotein 98.3 0.0018 6E-08 69.8 35.5 230 272-525 84-323 (400)
283 3v64_C Agrin; beta propeller, 98.3 0.0013 4.4E-08 69.4 32.7 235 299-563 33-273 (349)
284 3qqz_A Putative uncharacterize 98.3 0.00042 1.4E-08 68.9 26.6 209 293-519 20-250 (255)
285 3v65_B Low-density lipoprotein 98.3 0.00092 3.2E-08 71.7 31.4 235 300-563 77-316 (386)
286 1ijq_A LDL receptor, low-densi 98.3 0.00065 2.2E-08 70.7 29.4 229 550-806 4-242 (316)
287 2xe4_A Oligopeptidase B; hydro 98.2 0.00016 5.3E-09 85.2 25.1 239 402-650 175-461 (751)
288 2xe4_A Oligopeptidase B; hydro 98.2 4.5E-05 1.5E-09 89.8 20.0 157 577-735 175-354 (751)
289 4hw6_A Hypothetical protein, I 98.2 0.00038 1.3E-08 75.8 25.9 238 353-605 140-432 (433)
290 3p5b_L Low density lipoprotein 98.2 0.00098 3.3E-08 71.8 28.4 231 549-807 85-325 (400)
291 3sov_A LRP-6, low-density lipo 98.1 0.0018 6.2E-08 67.2 27.9 228 273-525 6-241 (318)
292 3tc9_A Hypothetical hydrolase; 98.1 0.00058 2E-08 74.4 24.9 235 493-734 138-429 (430)
293 3qqz_A Putative uncharacterize 98.0 0.0021 7.3E-08 63.8 25.8 207 347-563 22-251 (255)
294 3sov_A LRP-6, low-density lipo 98.0 0.0016 5.3E-08 67.7 26.0 202 264-487 38-246 (318)
295 2ism_A Putative oxidoreductase 98.0 0.0012 4.2E-08 69.7 25.5 222 452-677 33-333 (352)
296 3m0c_C LDL receptor, low-densi 98.0 0.009 3.1E-07 69.8 33.7 229 273-525 397-635 (791)
297 3a9g_A Putative uncharacterize 97.9 0.013 4.4E-07 61.8 30.5 228 492-723 29-330 (354)
298 3a9g_A Putative uncharacterize 97.9 0.0066 2.3E-07 64.0 27.8 225 451-677 30-330 (354)
299 3kya_A Putative phosphatase; s 97.9 0.0029 9.8E-08 69.1 25.1 267 537-806 140-479 (496)
300 2xzh_A Clathrin heavy chain 1; 97.8 0.034 1.2E-06 56.2 31.5 270 330-649 50-334 (365)
301 3amr_A 3-phytase; beta-propell 97.8 0.002 6.8E-08 66.4 21.8 196 586-808 39-270 (355)
302 2xzh_A Clathrin heavy chain 1; 97.8 0.041 1.4E-06 55.6 30.7 253 423-690 50-333 (365)
303 3kya_A Putative phosphatase; s 97.8 0.0049 1.7E-07 67.3 24.9 245 493-740 140-480 (496)
304 3m0c_C LDL receptor, low-densi 97.7 0.026 8.8E-07 65.9 32.0 221 330-565 405-632 (791)
305 1n7d_A LDL receptor, low-densi 97.7 0.00014 4.8E-09 84.5 12.2 231 272-525 378-617 (699)
306 2ism_A Putative oxidoreductase 97.7 0.014 4.9E-07 61.4 26.6 224 492-723 31-333 (352)
307 3amr_A 3-phytase; beta-propell 97.7 0.0056 1.9E-07 63.1 22.1 182 503-689 40-263 (355)
308 1bpo_A Protein (clathrin); cla 97.6 0.11 3.6E-06 54.8 33.1 254 422-690 48-332 (494)
309 2g8s_A Glucose/sorbosone dehyd 97.5 0.02 6.8E-07 60.3 25.0 234 452-687 20-350 (353)
310 1bpo_A Protein (clathrin); cla 97.5 0.14 4.8E-06 53.9 34.4 272 329-650 48-334 (494)
311 3das_A Putative oxidoreductase 97.5 0.13 4.4E-06 53.4 29.7 231 491-723 31-326 (347)
312 2p9w_A MAL S 1 allergenic prot 97.5 0.0059 2E-07 62.4 18.7 156 578-735 15-215 (334)
313 3das_A Putative oxidoreductase 97.4 0.05 1.7E-06 56.5 26.0 225 451-677 33-326 (347)
314 1n7d_A LDL receptor, low-densi 97.4 0.0003 1E-08 81.6 10.1 205 263-487 408-622 (699)
315 2p9w_A MAL S 1 allergenic prot 97.4 0.028 9.7E-07 57.4 22.1 155 452-607 15-216 (334)
316 2g8s_A Glucose/sorbosone dehyd 97.2 0.16 5.4E-06 53.3 27.6 231 492-728 18-347 (353)
317 2vpj_A Kelch-like protein 12; 97.2 0.03 1E-06 57.3 21.5 212 470-690 31-279 (301)
318 3sre_A PON1, serum paraoxonase 97.2 0.069 2.3E-06 55.7 23.1 192 538-734 52-297 (355)
319 2xn4_A Kelch-like protein 2; s 97.1 0.036 1.2E-06 56.8 20.8 225 503-737 16-278 (302)
320 3ii7_A Kelch-like protein 7; p 97.1 0.036 1.2E-06 56.8 20.8 225 503-737 12-274 (306)
321 1cru_A Protein (soluble quinop 97.1 0.15 5.1E-06 55.5 26.5 101 535-635 26-162 (454)
322 2vpj_A Kelch-like protein 12; 97.1 0.034 1.2E-06 56.9 19.8 226 502-737 14-280 (301)
323 3ii7_A Kelch-like protein 7; p 97.0 0.098 3.4E-06 53.5 23.1 228 463-700 15-281 (306)
324 3pbp_A Nucleoporin NUP82; beta 97.0 0.052 1.8E-06 57.1 20.1 157 625-798 29-208 (452)
325 1cru_A Protein (soluble quinop 97.0 0.58 2E-05 50.8 29.3 104 492-595 27-163 (454)
326 3sre_A PON1, serum paraoxonase 96.9 0.57 1.9E-05 48.8 30.7 201 301-521 51-297 (355)
327 1zgk_A Kelch-like ECH-associat 96.8 0.098 3.3E-06 53.7 21.1 225 502-737 24-289 (308)
328 3sbq_A Nitrous-oxide reductase 96.8 0.082 2.8E-06 57.3 19.6 249 463-736 73-409 (638)
329 4asc_A Kelch repeat and BTB do 96.7 0.1 3.4E-06 53.7 20.2 221 505-737 7-279 (315)
330 2be1_A Serine/threonine-protei 96.7 0.039 1.3E-06 57.1 16.1 242 546-802 10-297 (339)
331 3b7f_A Glycosyl hydrolase, BNR 96.7 0.88 3E-05 48.3 29.8 265 460-729 22-366 (394)
332 1zgk_A Kelch-like ECH-associat 96.6 0.25 8.6E-06 50.5 22.5 220 470-699 39-295 (308)
333 2xn4_A Kelch-like protein 2; s 96.6 0.13 4.5E-06 52.4 20.2 213 470-690 30-277 (302)
334 4asc_A Kelch repeat and BTB do 96.6 0.22 7.5E-06 51.1 21.8 219 464-690 9-278 (315)
335 3pbp_A Nucleoporin NUP82; beta 96.6 0.081 2.8E-06 55.6 17.8 154 308-476 29-209 (452)
336 2be1_A Serine/threonine-protei 96.6 0.039 1.3E-06 57.1 15.4 189 461-652 11-236 (339)
337 1tl2_A L10, protein (tachylect 96.6 0.062 2.1E-06 51.1 15.2 144 576-727 41-202 (236)
338 2uvk_A YJHT; unknown function, 96.6 0.12 4.1E-06 54.3 19.7 233 502-740 19-347 (357)
339 2woz_A Kelch repeat and BTB do 96.5 0.19 6.4E-06 51.8 20.8 209 505-725 18-263 (318)
340 3s25_A Hypothetical 7-bladed b 96.5 0.84 2.9E-05 46.4 26.3 220 267-524 20-257 (302)
341 1tl2_A L10, protein (tachylect 96.4 0.23 7.9E-06 47.2 17.8 145 536-689 41-208 (236)
342 2uvk_A YJHT; unknown function, 96.4 0.056 1.9E-06 56.8 15.7 197 586-809 65-349 (357)
343 1xi4_A Clathrin heavy chain; a 96.3 0.17 5.9E-06 61.2 20.1 254 422-690 48-332 (1630)
344 2woz_A Kelch repeat and BTB do 96.2 0.63 2.2E-05 47.7 22.7 215 471-690 25-288 (318)
345 1xi4_A Clathrin heavy chain; a 96.2 0.41 1.4E-05 58.0 22.5 266 365-650 35-334 (1630)
346 2wg3_C Hedgehog-interacting pr 95.8 2.7 9.1E-05 45.5 25.6 236 452-689 16-371 (463)
347 3sbq_A Nitrous-oxide reductase 95.7 3.1 0.0001 45.3 25.9 117 573-690 320-479 (638)
348 3s25_A Hypothetical 7-bladed b 94.8 3.9 0.00013 41.4 28.7 198 468-689 35-255 (302)
349 2zwa_A Leucine carboxyl methyl 94.8 1.6 5.6E-05 50.2 21.1 181 556-737 412-637 (695)
350 3b7f_A Glycosyl hydrolase, BNR 94.6 5.4 0.00018 42.0 30.6 266 399-667 53-391 (394)
351 3qhy_B Beta-lactamase inhibito 94.6 2.8 9.6E-05 42.0 19.9 186 536-739 24-211 (282)
352 2zwa_A Leucine carboxyl methyl 94.4 1.7 5.7E-05 50.1 19.9 197 412-610 397-639 (695)
353 3qhy_B Beta-lactamase inhibito 94.2 2.7 9.1E-05 42.2 18.8 224 491-737 23-248 (282)
354 3q6k_A 43.2 kDa salivary prote 93.9 7.1 0.00024 40.7 21.5 207 300-508 87-340 (381)
355 3nmd_A CGMP dependent protein 92.5 0.091 3.1E-06 39.3 3.2 26 26-51 38-63 (72)
356 1wp5_A Topoisomerase IV; broke 90.5 16 0.00056 37.1 25.4 235 501-735 3-277 (323)
357 2wg3_C Hedgehog-interacting pr 90.3 22 0.00076 38.2 31.8 229 492-723 14-354 (463)
358 3a0f_A Xyloglucanase; beta-pro 90.1 32 0.0011 39.8 36.8 160 298-470 19-203 (763)
359 1zxa_A CGMP-dependent protein 90.1 0.22 7.6E-06 36.8 3.2 25 27-51 24-48 (67)
360 1zi0_A DNA gyrase subunit A; b 88.7 22 0.00074 35.9 25.4 233 502-735 2-277 (307)
361 3q6k_A 43.2 kDa salivary prote 88.6 25 0.00086 36.5 21.3 136 598-735 124-306 (381)
362 1kd8_A GABH AIV, GCN4 acid bas 86.5 0.9 3.1E-05 28.2 3.6 28 26-53 6-33 (36)
363 3uc1_A DNA gyrase subunit A; D 85.8 33 0.0011 34.9 28.3 231 504-735 4-279 (327)
364 1suu_A DNA gyrase subunit A; t 85.4 33 0.0011 34.6 26.8 188 501-689 6-231 (312)
365 2cn3_A Xyloglucanase, beta-1,4 83.9 67 0.0023 36.9 39.7 102 578-681 385-499 (737)
366 3efg_A Protein SLYX homolog; x 83.3 1.6 5.3E-05 33.8 4.7 47 22-68 8-54 (78)
367 3vmx_A Voltage-gated hydrogen 81.0 1.4 5E-05 29.7 3.2 31 22-52 12-42 (48)
368 3ghg_A Fibrinogen alpha chain; 80.8 1.4 4.7E-05 46.4 4.6 45 23-67 112-156 (562)
369 3a2a_A Voltage-gated hydrogen 77.8 2 7E-05 29.6 3.2 29 23-51 20-48 (58)
370 4hvt_A Ritya.17583.B, post-pro 77.3 1E+02 0.0036 35.0 22.7 241 303-564 132-429 (711)
371 3no0_A DNA gyrase subunit A; D 76.4 62 0.0021 31.9 22.3 190 543-735 32-246 (276)
372 3no0_A DNA gyrase subunit A; D 76.0 63 0.0022 31.8 22.1 144 545-689 79-246 (276)
373 1ci6_A Transcription factor AT 75.9 1.3 4.5E-05 32.6 2.1 36 19-54 28-63 (63)
374 3uc1_A DNA gyrase subunit A; D 74.8 76 0.0026 32.1 26.9 225 463-689 6-279 (327)
375 1g6u_A Domain swapped dimer; d 74.2 3.1 0.00011 26.4 3.0 25 28-52 20-44 (48)
376 1sqj_A OXG-RCBH, oligoxylogluc 74.1 1.3E+02 0.0046 34.7 27.5 59 450-509 15-82 (789)
377 4gq2_M Nucleoporin NUP120; bet 73.8 52 0.0018 39.1 16.4 38 771-808 235-272 (950)
378 1zvt_A Topoisomerase IV subuni 72.8 72 0.0025 31.0 15.0 142 505-647 4-163 (256)
379 3m48_A General control protein 72.5 3.3 0.00011 25.4 2.8 26 26-51 5-30 (33)
380 2pnv_A Small conductance calci 72.2 1.1 3.6E-05 30.0 0.7 27 25-51 13-39 (43)
381 2zux_A YESW protein; beta-prop 71.8 1.2E+02 0.0041 33.1 26.1 151 573-735 361-532 (591)
382 3l6v_A GYRA, DNA gyrase subuni 71.5 98 0.0033 31.9 28.3 236 500-735 4-316 (370)
383 1zme_C Proline utilization tra 70.6 1.7 5.9E-05 32.8 1.7 26 28-53 44-69 (70)
384 1kd8_B GABH BLL, GCN4 acid bas 68.6 7 0.00024 24.4 3.6 28 26-53 6-33 (36)
385 4a9v_A PHOX; hydrolase, beta-p 68.4 1.2E+02 0.0039 33.4 15.9 60 450-509 476-548 (592)
386 4hvt_A Ritya.17583.B, post-pro 67.8 1.7E+02 0.0058 33.3 23.3 231 499-734 137-429 (711)
387 3zwu_A Alkaline phosphatase PH 67.4 64 0.0022 35.7 14.1 59 451-509 477-548 (592)
388 2oqq_A Transcription factor HY 67.0 3.8 0.00013 26.7 2.3 32 20-51 9-40 (42)
389 2gkw_A TNF receptor-associated 66.5 5 0.00017 37.4 4.3 36 30-65 2-37 (192)
390 3kci_A Probable E3 ubiquitin-p 65.7 1.3E+02 0.0044 31.1 27.2 159 577-739 106-297 (389)
391 1uo4_A General control protein 65.1 5.8 0.0002 24.4 2.8 26 26-51 6-31 (34)
392 2pnv_A Small conductance calci 65.0 5.9 0.0002 26.4 3.1 26 21-46 16-41 (43)
393 2wq1_A General control protein 64.7 8 0.00027 23.6 3.3 26 26-51 5-30 (33)
394 1dip_A Delta-sleep-inducing pe 64.6 5 0.00017 29.7 2.9 28 22-49 16-43 (78)
395 1suu_A DNA gyrase subunit A; t 64.2 1.2E+02 0.0042 30.3 26.9 183 463-647 11-231 (312)
396 3c3f_A Alpha/beta peptide with 63.9 8.4 0.00029 23.6 3.3 26 26-51 6-31 (34)
397 3c3g_A Alpha/beta peptide with 63.2 8.9 0.0003 23.4 3.3 26 26-51 5-30 (33)
398 4gq2_M Nucleoporin NUP120; bet 62.0 28 0.00096 41.4 10.7 40 300-347 236-275 (950)
399 4a9v_A PHOX; hydrolase, beta-p 61.8 19 0.00065 39.5 8.2 60 261-320 476-551 (592)
400 1pzq_A Erythronolide synthase; 61.6 11 0.00038 25.1 3.9 36 24-59 8-45 (60)
401 2oxj_A Hybrid alpha/beta pepti 60.0 11 0.00037 23.2 3.3 24 26-49 6-29 (34)
402 4g1a_A AQ-C16C19 peptide; heli 59.2 5.2 0.00018 23.1 1.7 22 26-47 5-26 (32)
403 1ic2_A Tropomyosin alpha chain 58.1 13 0.00045 28.9 4.6 37 28-64 41-77 (81)
404 2hy6_A General control protein 57.9 12 0.00042 23.0 3.3 16 44-59 13-28 (34)
405 3zwu_A Alkaline phosphatase PH 56.4 25 0.00084 39.1 8.2 57 262-318 477-549 (592)
406 1gd2_E Transcription factor PA 56.4 11 0.00036 28.4 3.6 35 26-60 34-68 (70)
407 1wp5_A Topoisomerase IV; broke 56.3 1.7E+02 0.0058 29.4 23.5 227 460-689 4-277 (323)
408 1lwu_C Fibrinogen gamma chain; 56.2 8.7 0.0003 38.7 4.1 44 24-67 8-51 (323)
409 3cve_A Homer protein homolog 1 55.1 11 0.00039 28.2 3.5 40 19-58 12-51 (72)
410 1fzc_A Fibrin; blood coagulati 54.8 6.6 0.00022 30.0 2.2 44 24-67 3-46 (87)
411 1sqj_A OXG-RCBH, oligoxylogluc 54.7 2.9E+02 0.01 31.7 40.7 162 299-473 14-195 (789)
412 4fhn_B Nucleoporin NUP120; pro 54.0 1.2E+02 0.0041 36.8 14.6 36 706-741 239-274 (1139)
413 1dh3_A Transcription factor CR 53.8 14 0.00047 26.3 3.7 27 28-54 22-48 (55)
414 1nkp_B MAX protein, MYC proto- 53.8 14 0.00048 28.8 4.2 37 27-63 46-82 (83)
415 4fhn_B Nucleoporin NUP120; pro 53.3 44 0.0015 40.7 10.6 39 770-808 236-274 (1139)
416 1t2k_D Cyclic-AMP-dependent tr 53.3 18 0.00062 26.3 4.4 35 28-62 22-56 (61)
417 4dzn_A Coiled-coil peptide CC- 52.9 19 0.00063 21.0 3.3 25 29-53 3-27 (33)
418 1zi0_A DNA gyrase subunit A; b 52.1 1.9E+02 0.0065 28.8 26.8 225 463-689 6-277 (307)
419 3f7f_A Nucleoporin NUP120; nuc 51.7 55 0.0019 37.0 10.0 37 301-347 223-259 (729)
420 3cvf_A Homer-3, homer protein 51.4 14 0.00047 28.4 3.5 20 22-41 21-40 (79)
421 2akf_A Coronin-1A; coiled coil 50.8 9.9 0.00034 22.4 2.0 16 24-39 16-31 (32)
422 3q0x_A Centriole protein; cent 50.6 15 0.00052 34.7 4.6 41 25-65 175-215 (228)
423 3ljm_A Coil Ser L9C; de novo d 50.6 15 0.0005 21.2 2.6 21 26-46 6-26 (31)
424 1aq5_A Matrilin-1, CMP, cartil 49.9 12 0.0004 25.4 2.6 25 41-65 22-46 (47)
425 2uwj_E Type III export protein 49.4 16 0.00055 26.9 3.4 29 31-59 6-39 (70)
426 3u1c_A Tropomyosin alpha-1 cha 48.7 16 0.00056 29.7 3.9 42 25-66 41-82 (101)
427 1jnm_A Proto-oncogene C-JUN; B 47.1 27 0.00094 25.4 4.5 36 27-62 21-56 (62)
428 2dgc_A Protein (GCN4); basic d 46.9 20 0.00067 26.3 3.7 26 27-52 29-54 (63)
429 2er8_A Regulatory protein Leu3 46.8 7.2 0.00025 29.4 1.4 24 26-49 47-70 (72)
430 1lwu_A Fibrinogen alpha-1 chai 46.4 27 0.00093 28.6 4.7 45 22-66 23-67 (119)
431 2oxj_A Hybrid alpha/beta pepti 45.5 38 0.0013 20.9 4.0 30 28-61 1-30 (34)
432 1gp8_A Protein (scaffolding pr 45.3 12 0.00043 23.8 2.0 17 23-39 3-19 (40)
433 1deq_A Fibrinogen (alpha chain 45.2 16 0.00053 37.0 3.8 51 16-66 108-158 (390)
434 1dip_A Delta-sleep-inducing pe 44.4 13 0.00044 27.6 2.2 30 39-68 12-41 (78)
435 1zw0_A Type III secretion prot 43.8 27 0.00094 25.3 3.8 29 31-59 2-33 (66)
436 3a7p_A Autophagy protein 16; c 42.8 20 0.00067 31.3 3.6 45 19-63 73-124 (152)
437 1x8y_A Lamin A/C; structural p 41.4 39 0.0013 26.5 4.9 37 21-57 10-57 (86)
438 2xdj_A Uncharacterized protein 41.3 35 0.0012 26.6 4.5 42 25-66 3-58 (83)
439 1fzc_C Fibrin; blood coagulati 40.6 8 0.00027 38.9 1.0 41 26-66 2-42 (319)
440 3l6v_A GYRA, DNA gyrase subuni 40.4 3.2E+02 0.011 28.0 26.8 229 459-688 5-315 (370)
441 2bni_A General control protein 40.2 23 0.00078 21.9 2.5 25 26-50 6-30 (34)
442 1ci6_A Transcription factor AT 39.3 44 0.0015 24.4 4.6 33 28-60 23-55 (63)
443 2wt7_A Proto-oncogene protein 38.7 44 0.0015 24.4 4.5 34 28-61 23-56 (63)
444 3gpv_A Transcriptional regulat 38.0 39 0.0013 29.7 5.0 45 23-67 90-134 (148)
445 2zvf_A Alanyl-tRNA synthetase; 37.9 25 0.00087 31.7 3.9 36 19-54 23-58 (171)
446 1ic2_A Tropomyosin alpha chain 37.8 29 0.001 26.9 3.7 47 20-66 12-58 (81)
447 1uuj_A Platelet-activating fac 37.5 14 0.00049 29.0 1.8 25 21-45 58-82 (88)
448 1zme_C Proline utilization tra 37.4 13 0.00044 27.7 1.5 23 23-45 46-68 (70)
449 3gp4_A Transcriptional regulat 36.3 38 0.0013 29.6 4.6 44 24-67 77-120 (142)
450 1wlq_A Geminin; coiled-coil; 2 36.3 29 0.00099 26.7 3.2 37 22-59 39-75 (83)
451 2xu6_A MDV1 coiled coil; prote 36.3 44 0.0015 24.9 4.0 44 24-67 3-53 (72)
452 2yy0_A C-MYC-binding protein; 36.1 45 0.0015 23.4 4.0 25 15-39 20-44 (53)
453 3viq_B Mating-type switching p 35.6 11 0.00037 29.4 0.8 30 23-52 3-32 (85)
454 3bj4_A Potassium voltage-gated 35.5 66 0.0023 22.0 4.5 35 22-56 11-45 (49)
455 2cn3_A Xyloglucanase, beta-1,4 35.1 5.4E+02 0.019 29.1 48.5 119 577-698 434-562 (737)
456 2ovc_A Potassium voltage-gated 35.1 26 0.00088 21.8 2.2 26 22-47 4-29 (33)
457 3a0c_A Mannose/sialic acid-bin 34.5 1.9E+02 0.0064 23.6 10.2 45 621-675 54-98 (110)
458 1sb0_B Protein C-MYB; CREB-bin 34.4 26 0.00088 19.8 1.9 18 28-45 3-20 (26)
459 3efg_A Protein SLYX homolog; x 33.8 35 0.0012 26.2 3.4 45 19-63 12-63 (78)
460 2wvr_A Geminin; DNA replicatio 33.8 34 0.0012 31.1 3.8 38 22-59 116-159 (209)
461 1go4_E MAD1 (mitotic arrest de 33.7 32 0.0011 27.7 3.3 45 19-63 24-96 (100)
462 3hh0_A Transcriptional regulat 33.7 46 0.0016 29.1 4.7 47 19-65 71-117 (146)
463 2r2v_A GCN4 leucine zipper; co 33.5 51 0.0018 20.4 3.3 24 26-49 6-29 (34)
464 3pp5_A BRK1, protein brick1; t 33.5 37 0.0013 25.5 3.3 28 25-52 42-69 (73)
465 1t2k_D Cyclic-AMP-dependent tr 33.3 41 0.0014 24.3 3.6 31 24-54 25-55 (61)
466 1fxk_C Protein (prefoldin); ar 33.3 44 0.0015 28.7 4.5 39 25-63 92-130 (133)
467 2lw1_A ABC transporter ATP-bin 32.0 30 0.001 27.3 2.9 39 27-65 21-72 (89)
468 2eqb_B RAB guanine nucleotide 31.8 57 0.0019 26.1 4.4 45 22-66 6-50 (97)
469 3cvf_A Homer-3, homer protein 31.6 40 0.0014 25.8 3.3 36 20-55 5-40 (79)
470 3elq_A Arylsulfate sulfotransf 31.1 5.5E+02 0.019 28.0 24.5 213 257-487 203-548 (571)
471 3ph0_A ASCE; type III secretio 31.1 37 0.0013 24.9 2.9 29 31-59 3-36 (67)
472 2djv_A Methionyl-tRNA syntheta 31.1 57 0.0019 25.1 4.2 26 25-50 10-35 (79)
473 1m1j_A Fibrinogen alpha subuni 31.0 32 0.0011 35.7 3.5 51 18-68 108-158 (491)
474 2yy0_A C-MYC-binding protein; 31.0 17 0.00057 25.6 1.1 33 30-62 21-53 (53)
475 3kci_A Probable E3 ubiquitin-p 30.7 4.5E+02 0.015 26.8 31.0 270 412-689 10-345 (389)
476 3swk_A Vimentin; cytoskeleton, 30.4 20 0.0007 28.1 1.6 19 31-49 66-84 (86)
477 4d9s_A UVB-resistance protein 29.9 4.8E+02 0.016 26.9 34.4 238 492-739 16-309 (406)
478 1ytz_T Troponin T; muscle, THI 29.8 31 0.0011 28.3 2.6 24 31-54 66-89 (107)
479 1q08_A Zn(II)-responsive regul 29.2 68 0.0023 25.6 4.8 39 25-63 36-74 (99)
480 4d9s_A UVB-resistance protein 29.0 4.9E+02 0.017 26.7 33.2 277 400-689 15-357 (406)
481 1zvt_A Topoisomerase IV subuni 28.3 4E+02 0.014 25.5 15.9 152 630-802 4-163 (256)
482 2jee_A YIIU; FTSZ, septum, coi 28.1 55 0.0019 25.2 3.6 29 28-56 6-34 (81)
483 3twe_A Alpha4H; unknown functi 27.9 35 0.0012 19.0 1.7 16 23-38 10-25 (27)
484 2yko_A LINE-1 ORF1P; RNA-bindi 27.8 54 0.0019 30.9 4.3 33 26-58 18-50 (233)
485 2dgc_A Protein (GCN4); basic d 27.7 35 0.0012 24.9 2.4 27 25-51 34-60 (63)
486 3trt_A Vimentin; cytoskeleton, 27.4 85 0.0029 23.8 4.7 41 26-66 33-73 (77)
487 2xu6_A MDV1 coiled coil; prote 27.0 28 0.00095 26.0 1.7 27 25-51 39-65 (72)
488 3f7f_A Nucleoporin NUP120; nuc 26.9 74 0.0025 36.0 5.9 35 772-808 222-256 (729)
489 1nlw_A MAD protein, MAX dimeri 26.8 68 0.0023 24.7 4.0 34 28-61 47-80 (80)
490 3ra3_A P1C; coiled coil domain 26.8 75 0.0026 17.8 2.9 17 31-47 10-26 (28)
491 1gk6_A Vimentin; intermediate 26.7 48 0.0017 23.8 2.9 18 26-43 5-22 (59)
492 1jnm_A Proto-oncogene C-JUN; B 26.5 58 0.002 23.6 3.4 28 25-52 26-53 (62)
493 2kke_A Uncharacterized protein 26.1 36 0.0012 22.1 1.9 24 39-62 20-51 (53)
494 1i27_A Transcription factor II 26.1 30 0.001 25.9 1.8 15 46-60 44-58 (73)
495 1b2p_A Protein (lectin); manno 25.6 2.8E+02 0.0097 22.9 10.5 45 621-675 64-108 (119)
496 3mov_A Lamin-B1; LMNB1, B-type 25.6 93 0.0032 24.9 4.7 26 19-44 17-42 (95)
497 3u06_A Protein claret segregat 25.6 40 0.0014 35.4 3.4 39 19-57 8-48 (412)
498 3hnw_A Uncharacterized protein 25.5 80 0.0027 27.3 4.7 41 24-64 71-111 (138)
499 1nha_A TFIIF-alpha, transcript 25.4 31 0.0011 26.4 1.8 16 45-60 52-67 (82)
500 1hjb_A Ccaat/enhancer binding 25.2 37 0.0013 26.7 2.2 24 31-54 53-76 (87)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.4e-62 Score=566.17 Aligned_cols=487 Identities=17% Similarity=0.257 Sum_probs=398.3
Q ss_pred CCccceEEccCCcEEEEe-ccEEEEEeCCCC-ceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCC
Q psy9770 261 DCRSNLYLLPTGEIVYFV-AAVAVLYNVEEQ-TQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVS 338 (811)
Q Consensus 261 ~~~~~l~~spdg~~l~~~-~~~i~i~d~~~~-~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t 338 (811)
.....++|+|||++|+++ ++.|.||++.++ ....+.+|...|++++|+|||++||+|+.|+ +|+|||+.+
T Consensus 19 g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~--------~v~lWd~~~ 90 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHG--------NVRIWDTTQ 90 (611)
T ss_dssp TCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTS--------EEEEEESSS
T ss_pred CceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCC--------CEEEeECCC
Confidence 345789999999877766 479999999865 4577899999999999999999999999999 999999976
Q ss_pred Cc--EEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCC--ceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCC
Q psy9770 339 LF--TVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGND--YNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRN 414 (811)
Q Consensus 339 ~~--~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d--~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ 414 (811)
++ ....+. +|.+.|.+++|+| +|++|++.+...+ +.|++|| .++ .+..+.+|...|.+++|+|++..
T Consensus 91 ~~~~~~~~~~--~~~~~v~~v~fs~--dg~~l~~~~~~~~~~~~v~~wd--~~~---~~~~l~gh~~~v~~v~f~p~~~~ 161 (611)
T 1nr0_A 91 TTHILKTTIP--VFSGPVKDISWDS--ESKRIAAVGEGRERFGHVFLFD--TGT---SNGNLTGQARAMNSVDFKPSRPF 161 (611)
T ss_dssp TTCCEEEEEE--CSSSCEEEEEECT--TSCEEEEEECCSSCSEEEEETT--TCC---BCBCCCCCSSCEEEEEECSSSSC
T ss_pred CcceeeEeec--ccCCceEEEEECC--CCCEEEEEECCCCceeEEEEee--CCC---CcceecCCCCCceEEEECCCCCe
Confidence 54 344554 8999999999999 8999998644444 3555555 566 67788999999999999998876
Q ss_pred -eEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeec----
Q psy9770 415 -NIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRN---- 488 (811)
Q Consensus 415 -ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~---- 488 (811)
+++++.|+.|++|+..+++.+..+ .+|...|.+++|+|+|+ +++|+.||.|++||+.+++....+..
T Consensus 162 ~l~s~s~D~~v~lwd~~~~~~~~~l-------~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~ 234 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPPFKFKSTF-------GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 234 (611)
T ss_dssp EEEEEETTSCEEEEETTTBEEEEEE-------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSS
T ss_pred EEEEEeCCCeEEEEECCCCeEeeee-------ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecccccc
Confidence 555566899999998754443332 66888999999999998 56999999999999999988887743
Q ss_pred --ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeec-cccCCeEEEeeCCCCeEEEEeCCCeEEEEEccC
Q psy9770 489 --VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIA-EHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNL 565 (811)
Q Consensus 489 --~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~ 565 (811)
+|.+.|.+++|+|+|++|++++.|++|++||+.+.+........ .+...+..+.+ .+..+++++.++.+++|+...
T Consensus 235 ~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~i~~~~~~~ 313 (611)
T 1nr0_A 235 NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW-TKQALVSISANGFINFVNPEL 313 (611)
T ss_dssp SCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE-CSSCEEEEETTCCEEEEETTT
T ss_pred ccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE-cCCEEEEEeCCCcEEEEeCCC
Confidence 69999999999999999999999999999999876652222211 12233445555 567889999999999999887
Q ss_pred C-ceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe-------------------------------
Q psy9770 566 G-FSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK------------------------------- 613 (811)
Q Consensus 566 ~-~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~------------------------------- 613 (811)
+ ....+.+|...|.+++|+|++++|++++.|++|++||+.+++....+
T Consensus 314 ~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w 393 (611)
T 1nr0_A 314 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVV 393 (611)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEE
T ss_pred CCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEe
Confidence 6 34556799999999999999999999999999999998765432211
Q ss_pred ----------------------------------------------------cCCCCeEEEEEcCCCCEEEEEEeCCeEE
Q psy9770 614 ----------------------------------------------------DIAEQAQSATFSPDGSIIIVGCIAGRWL 641 (811)
Q Consensus 614 ----------------------------------------------------~~~~~v~~~~~spdg~~la~g~~dg~i~ 641 (811)
.+...+.+++|+|||++||+|+.|+.|+
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~ 473 (611)
T 1nr0_A 394 PAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVH 473 (611)
T ss_dssp CSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred ecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEE
Confidence 1123467899999999999999999999
Q ss_pred EEecCCcce--eEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEE--ecCCCCCeeEEEeCCCCC
Q psy9770 642 VMDSETREA--YSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGR--CTGHSSFITHLDWSEDSM 717 (811)
Q Consensus 642 i~d~~~~~~--~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~--~~~h~~~V~~l~~spdg~ 717 (811)
+||+.++.. +.. .+|...|++++|+|||++||+++.|+.|++|++.++. +.+.. +.+|...|++++|+|||+
T Consensus 474 lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~---~~~~~~~~~~H~~~V~~v~fspdg~ 549 (611)
T 1nr0_A 474 VYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF---ELAHTNSWTFHTAKVACVSWSPDNV 549 (611)
T ss_dssp EEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT---EESCCCCCCCCSSCEEEEEECTTSS
T ss_pred EEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCC---ceeeeeeeeecccceeEEEECCCCC
Confidence 999987653 233 6788999999999999999999999999999998732 22222 345999999999999999
Q ss_pred eEEEecCCceEEEEECCCCcccC-CCCCccceeEeccceeeccceeeeCCCCCC-CCccceEEecCCCCEEEEEcCCCcE
Q psy9770 718 YIRSNSGDYELLYWNAGTCRQIP-QSSQLRDVVWESNSCTLTFTTIGIWPEGAD-GTDVNSCERSHDARVIATGDDFGKL 795 (811)
Q Consensus 718 ~L~s~s~Dg~i~iWd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h-~~~I~~l~~s~dg~~Las~~~dg~v 795 (811)
+|++++.|++|++||+.+++... . ...+| ...|++++|+||++ |++++.||+|
T Consensus 550 ~lasgs~D~~v~lW~~~~~~~~~~~------------------------~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i 604 (611)
T 1nr0_A 550 RLATGSLDNSVIVWNMNKPSDHPII------------------------IKGAHAMSSVNSVIWLNETT-IVSAGQDSNI 604 (611)
T ss_dssp EEEEEETTSCEEEEETTCTTSCCEE------------------------ETTSSTTSCEEEEEEEETTE-EEEEETTSCE
T ss_pred EEEEEECCCcEEEEECCCcccccch------------------------hhccCcccCeeEEEEcCCCE-EEEecCCCCE
Confidence 99999999999999998765221 0 01246 67899999999998 9999999999
Q ss_pred EEEeCC
Q psy9770 796 KLYSYP 801 (811)
Q Consensus 796 ~vw~~~ 801 (811)
++|+++
T Consensus 605 ~lW~~~ 610 (611)
T 1nr0_A 605 KFWNVP 610 (611)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 999985
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.3e-61 Score=556.99 Aligned_cols=476 Identities=18% Similarity=0.313 Sum_probs=411.2
Q ss_pred CCccceEEccCCcEEEEec--cEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCC
Q psy9770 261 DCRSNLYLLPTGEIVYFVA--AVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVS 338 (811)
Q Consensus 261 ~~~~~l~~spdg~~l~~~~--~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t 338 (811)
+.+.+|+|+|||++|++++ +.|+|||......+.+.+|...|++++|+||+++||+++.|+ .|+|||. +
T Consensus 17 ~~V~~~a~spdg~~las~~~d~~v~iWd~~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~--------~i~vWd~-~ 87 (577)
T 2ymu_A 17 SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDK--------TVKLWNR-N 87 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS--------CEEEEET-T
T ss_pred CcEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCC--------EEEEEEC-C
Confidence 5678999999999999875 799999987777788999999999999999999999999999 9999995 6
Q ss_pred CcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcc---------------------------------
Q psy9770 339 LFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQ--------------------------------- 385 (811)
Q Consensus 339 ~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~--------------------------------- 385 (811)
++.+..+. +|...|.+++|+| +|++|++ ++.|+.+++|+..
T Consensus 88 ~~~~~~~~--~~~~~v~~~~~s~--d~~~l~~--~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 161 (577)
T 2ymu_A 88 GQLLQTLT--GHSSSVRGVAFSP--DGQTIAS--ASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDK 161 (577)
T ss_dssp SCEEEEEC--CCSSCEEEEEECT--TSSEEEE--EETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred CCEEEEEE--CCCCCEEEEEECC--CCCEEEE--EcCCCceeecccccceeeeccCCCCceeeeeeecCCccceeccccc
Confidence 78888876 8999999999999 7777776 3444444444421
Q ss_pred ------------------------------------------------cCCCcceEEEeeeCCCcEEEEEecCCCCCeEE
Q psy9770 386 ------------------------------------------------KSDRGHKITETKCSVDTVVAAEFHPLDRNNIV 417 (811)
Q Consensus 386 ------------------------------------------------~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~ 417 (811)
+++ .+..+..|...|.+++|+|++..+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~---~~~~~~~~~~~v~~~~~s~dg~~l~~ 238 (577)
T 2ymu_A 162 TVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSPDGQTIAS 238 (577)
T ss_dssp EEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC---EEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred ceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCCc---EEEEEecCCCCEEEEEECCCCCEEEE
Confidence 222 45667788999999999999999998
Q ss_pred EECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEE
Q psy9770 418 TCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFS 496 (811)
Q Consensus 418 ~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~ 496 (811)
++.|+.|++|+.. ++.+... .+|...|.+++|+|++. +++++.|+.|++||.. ++....+. +|...|.+
T Consensus 239 ~~~d~~i~~w~~~-~~~~~~~-------~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~-~h~~~v~~ 308 (577)
T 2ymu_A 239 ASDDKTVKLWNRN-GQLLQTL-------TGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLT-GHSSSVWG 308 (577)
T ss_dssp EETTSCEEEECTT-SCEEEEE-------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEEC-CCSSCEEE
T ss_pred EeCCCEEEEEeCC-CCEEEEE-------ecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEe-cCCCCeEE
Confidence 8999999999965 5444433 56778899999999998 5699999999999975 56667776 89999999
Q ss_pred EEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCe-EEEEeCCCeEEEEEccCCceeeeeecc
Q psy9770 497 ICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQ-LIVGTTRNCILVGSLNLGFSPVVLGHT 575 (811)
Q Consensus 497 l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-l~~~~~~~~i~~~d~~~~~~~~~~~h~ 575 (811)
++|+|++++|++++.|+.|++||...... ..+..|...+.+++++|++. +++++.++.|++|+........+.+|.
T Consensus 309 ~~~~~~~~~l~t~~~d~~i~~w~~~~~~~---~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~ 385 (577)
T 2ymu_A 309 VAFSPDGQTIASASDDKTVKLWNRNGQHL---QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS 385 (577)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTSCEE---EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCS
T ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCee---EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCC
Confidence 99999999999999999999999876544 56778889999999998865 566888999999998877888889999
Q ss_pred cceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEec
Q psy9770 576 DELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHT 655 (811)
Q Consensus 576 ~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~ 655 (811)
..|.+++|+|++++|++++.|+.|++||...........+...|.+++|+||+++|++++.|+.|++||. +++.+..+.
T Consensus 386 ~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~ 464 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLT 464 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEc
Confidence 9999999999999999999999999999654433333678899999999999999999999999999996 577888899
Q ss_pred CCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCC
Q psy9770 656 DGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 656 ~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
+|...|.+++|+||+++||+++.|+.|++|+... +.+..+.+|...|++++|+||+++|++++.||.|++||. +
T Consensus 465 ~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~-----~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~ 538 (577)
T 2ymu_A 465 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N 538 (577)
T ss_dssp CCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS-----CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-T
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC-----CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-C
Confidence 9999999999999999999999999999999643 466778999999999999999999999999999999996 4
Q ss_pred CcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEe
Q psy9770 736 CRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYS 799 (811)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~ 799 (811)
++++..+ .+|...|++++|+|||++|++++.||+|++||
T Consensus 539 ~~~~~~~-------------------------~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 539 GQLLQTL-------------------------TGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEE-------------------------ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEE-------------------------cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 5544322 24788999999999999999999999999997
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1e-57 Score=528.60 Aligned_cols=480 Identities=19% Similarity=0.340 Sum_probs=412.1
Q ss_pred CceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEE
Q psy9770 290 QTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLC 369 (811)
Q Consensus 290 ~~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~La 369 (811)
++++.|.||++.|+|++|||||++||+|+.|+ .|+|||. ++++++++. +|...|.+++|+| +|++|+
T Consensus 7 ~e~~~L~GH~~~V~~~a~spdg~~las~~~d~--------~v~iWd~-~~~~~~~l~--gh~~~V~~l~fsp--dg~~la 73 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSPDGQTIASASDDK--------TVKLWNR-NGQLLQTLT--GHSSSVWGVAFSP--DGQTIA 73 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTS--------EEEEECT-TSCEEEEEE--CCSSCEEEEEECT--TSSEEE
T ss_pred EEeeEECCCCCcEEEEEECCCCCEEEEEeCCC--------EEEEEEC-CCCEEEEEe--CCCCCEEEEEECC--CCCEEE
Confidence 45677999999999999999999999999999 9999995 788999887 9999999999999 899999
Q ss_pred EEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecc---------
Q psy9770 370 AVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQG--------- 440 (811)
Q Consensus 370 sv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~--------- 440 (811)
+ ++.|++|+|||+ +++ ++..+.+|...|.+++|+|++..+++++.|+.+++|+.... .......
T Consensus 74 s--~~~d~~i~vWd~-~~~---~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~-~~~~~~~~~~~v~~~~ 146 (577)
T 2ymu_A 74 S--ASDDKTVKLWNR-NGQ---LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ-LLQTLTGHSSSVWGVA 146 (577)
T ss_dssp E--EETTSCEEEEET-TSC---EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCC-EEEEECCCSSCEEEEE
T ss_pred E--EeCCCEEEEEEC-CCC---EEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccc-eeeeccCCCCceeeee
Confidence 8 688999999996 455 78999999999999999999888888888999999996522 1111100
Q ss_pred -------------------------cccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccce
Q psy9770 441 -------------------------IFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSV 494 (811)
Q Consensus 441 -------------------------~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V 494 (811)
.......+...+.+++|+|++. +++++.||.|++||.. ++....+. .|...|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~-~~~~~~~~-~~~~~v 224 (577)
T 2ymu_A 147 FSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLT-GHSSSV 224 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEEEEEE-CCSSCE
T ss_pred eecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCC-CcEEEEEe-cCCCCE
Confidence 0011244667889999999998 6699999999999964 66777777 899999
Q ss_pred EEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCC-eEEEEeCCCeEEEEEccCCceeeeee
Q psy9770 495 FSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGS-QLIVGTTRNCILVGSLNLGFSPVVLG 573 (811)
Q Consensus 495 ~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~l~~~~~~~~i~~~d~~~~~~~~~~~ 573 (811)
.+++|+|++++|++++.|+.|++||.+... ...+.+|...|.++++.+++ .+++++.++.|++|+........+.+
T Consensus 225 ~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~---~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~ 301 (577)
T 2ymu_A 225 RGVAFSPDGQTIASASDDKTVKLWNRNGQL---LQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTG 301 (577)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTTSCE---EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCCE---EEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEec
Confidence 999999999999999999999999976433 46678899999999999876 46678899999999998888888899
Q ss_pred cccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEE
Q psy9770 574 HTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI 653 (811)
Q Consensus 574 h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~ 653 (811)
|...|.+++|+|++++|++++.|+.|++||+..........+...+.+++|+|+|++|++++.||.|++||. +++.+..
T Consensus 302 h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~ 380 (577)
T 2ymu_A 302 HSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQT 380 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEE
Confidence 999999999999999999999999999999887776666778889999999999999999999999999995 5788888
Q ss_pred ecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEEC
Q psy9770 654 HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNA 733 (811)
Q Consensus 654 ~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~ 733 (811)
+.+|...|.+++|+|||++|++++.|+.|++||... +.+..+.+|...|++++|+||+++|++++.|+.|++||.
T Consensus 381 ~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~-----~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~ 455 (577)
T 2ymu_A 381 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR 455 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC-----CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC-----CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 999999999999999999999999999999999543 466778899999999999999999999999999999997
Q ss_pred CCCcccCC----CCCccceeEeccceeec----cceeeeCCCC--------CCCCccceEEecCCCCEEEEEcCCCcEEE
Q psy9770 734 GTCRQIPQ----SSQLRDVVWESNSCTLT----FTTIGIWPEG--------ADGTDVNSCERSHDARVIATGDDFGKLKL 797 (811)
Q Consensus 734 ~~~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~i~~~~--------~h~~~I~~l~~s~dg~~Las~~~dg~v~v 797 (811)
. ++.+.. ......+.|+++...+. ...+.+|+.. +|...|++|+|+|||++||+++.||.|+|
T Consensus 456 ~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~l 534 (577)
T 2ymu_A 456 N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL 534 (577)
T ss_dssp T-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred C-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEE
Confidence 5 444432 23445677887766553 2345667543 47889999999999999999999999999
Q ss_pred EeCC
Q psy9770 798 YSYP 801 (811)
Q Consensus 798 w~~~ 801 (811)
||++
T Consensus 535 wd~~ 538 (577)
T 2ymu_A 535 WNRN 538 (577)
T ss_dssp ECTT
T ss_pred EeCC
Confidence 9974
No 4
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.9e-56 Score=517.95 Aligned_cols=455 Identities=15% Similarity=0.138 Sum_probs=377.2
Q ss_pred CCccceEEccCCcEEEEec--cEEEEEeCCCCc---eEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEe
Q psy9770 261 DCRSNLYLLPTGEIVYFVA--AVAVLYNVEEQT---QRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWN 335 (811)
Q Consensus 261 ~~~~~l~~spdg~~l~~~~--~~i~i~d~~~~~---~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd 335 (811)
+.+..++|+|||++|++++ +.|+|||+.+++ ...+.+|...|.+++|+|||++||+++.+.. ....|++||
T Consensus 60 ~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~----~~~~v~~wd 135 (611)
T 1nr0_A 60 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE----RFGHVFLFD 135 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS----CSEEEEETT
T ss_pred CceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC----ceeEEEEee
Confidence 4568899999999999885 899999997543 3457889999999999999999999876520 011677777
Q ss_pred CCCCcEEEEeccCCccccEEEEEEecCCCCc-EEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCC
Q psy9770 336 SVSLFTVSIIGIGEFERSISCLSFSKADGGT-FLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRN 414 (811)
Q Consensus 336 ~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~-~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ 414 (811)
+++.+..+. +|...|.+++|+| ++. +|++ ++.|++|++||..+++ ++..+.+|...|.+++|+|++..
T Consensus 136 --~~~~~~~l~--gh~~~v~~v~f~p--~~~~~l~s--~s~D~~v~lwd~~~~~---~~~~l~~H~~~V~~v~fspdg~~ 204 (611)
T 1nr0_A 136 --TGTSNGNLT--GQARAMNSVDFKP--SRPFRIIS--GSDDNTVAIFEGPPFK---FKSTFGEHTKFVHSVRYNPDGSL 204 (611)
T ss_dssp --TCCBCBCCC--CCSSCEEEEEECS--SSSCEEEE--EETTSCEEEEETTTBE---EEEEECCCSSCEEEEEECTTSSE
T ss_pred --CCCCcceec--CCCCCceEEEECC--CCCeEEEE--EeCCCeEEEEECCCCe---EeeeeccccCceEEEEECCCCCE
Confidence 456666655 9999999999999 665 5777 7999999999998877 88899999999999999998888
Q ss_pred eEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEee------
Q psy9770 415 NIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIR------ 487 (811)
Q Consensus 415 ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~------ 487 (811)
+++++.|+.|++|++.++..+...........+|...|.+++|+|+|+ +++++.|++|++||+.+++....+.
T Consensus 205 las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~ 284 (611)
T 1nr0_A 205 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIE 284 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGG
T ss_pred EEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCcc
Confidence 888888999999999877766544211111136889999999999998 6699999999999998876554321
Q ss_pred ------------------------------------cccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeee
Q psy9770 488 ------------------------------------NVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQI 531 (811)
Q Consensus 488 ------------------------------------~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~ 531 (811)
.+|...|.+++|+|+|++|++++.|+.|++||+..+.. .....
T Consensus 285 ~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~-~~~~~ 363 (611)
T 1nr0_A 285 DQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGIS-NRVFP 363 (611)
T ss_dssp GCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-EECSS
T ss_pred ceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce-eeecc
Confidence 26889999999999999999999999999999987765 22222
Q ss_pred ccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCcee-----------------------------------------e
Q psy9770 532 AEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSP-----------------------------------------V 570 (811)
Q Consensus 532 ~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~-----------------------------------------~ 570 (811)
..|...+.++++++++.+++++.++.+++|+....... .
T Consensus 364 ~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~ 443 (611)
T 1nr0_A 364 DVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 443 (611)
T ss_dssp CSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEE
T ss_pred cCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCcee
Confidence 56888999999999999999999999999997643110 0
Q ss_pred eeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcE--EEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCC-
Q psy9770 571 VLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSV--VWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSET- 647 (811)
Q Consensus 571 ~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~--~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~- 647 (811)
...|...+.+++|+|++++|++++.|++|++||+.++.. .....|...|.+++|+|||++|++++.|+.|++||+.+
T Consensus 444 ~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~ 523 (611)
T 1nr0_A 444 EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN 523 (611)
T ss_dssp EEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT
T ss_pred eeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCC
Confidence 112456789999999999999999999999999987654 23367889999999999999999999999999999987
Q ss_pred cceeEE--ecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCC-CCCeeEEEeCCCCCeEEEecC
Q psy9770 648 REAYSI--HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGH-SSFITHLDWSEDSMYIRSNSG 724 (811)
Q Consensus 648 ~~~~~~--~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~l~~spdg~~L~s~s~ 724 (811)
++++.. +..|...|.+++|+|||++||+|+.|++|+||++..+.... +..+.+| ...|++++|+||++ |++++.
T Consensus 524 ~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~--~~~~~~h~~~~v~~v~fs~d~~-l~s~~~ 600 (611)
T 1nr0_A 524 FELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHP--IIIKGAHAMSSVNSVIWLNETT-IVSAGQ 600 (611)
T ss_dssp TEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCC--EEETTSSTTSCEEEEEEEETTE-EEEEET
T ss_pred CceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCccccc--chhhccCcccCeeEEEEcCCCE-EEEecC
Confidence 555543 34599999999999999999999999999999998764221 2456789 89999999999998 999999
Q ss_pred CceEEEEECC
Q psy9770 725 DYELLYWNAG 734 (811)
Q Consensus 725 Dg~i~iWd~~ 734 (811)
|++|++|++.
T Consensus 601 D~~i~lW~~~ 610 (611)
T 1nr0_A 601 DSNIKFWNVP 610 (611)
T ss_dssp TSCEEEEECC
T ss_pred CCCEEEEecc
Confidence 9999999973
No 5
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9.9e-55 Score=507.22 Aligned_cols=482 Identities=15% Similarity=0.230 Sum_probs=398.3
Q ss_pred CCccceEEccCCcEEEEe-ccEEEEEeCCCC-----ceEEeccCCCC-eEEEEEcC--CCcEEEEeeccCCCCCCCCCeE
Q psy9770 261 DCRSNLYLLPTGEIVYFV-AAVAVLYNVEEQ-----TQRHYLGHTDD-IKCLSIHP--NKLLIATGQVAGHDAREGKPHI 331 (811)
Q Consensus 261 ~~~~~l~~spdg~~l~~~-~~~i~i~d~~~~-----~~~~~~~h~~~-V~~la~sp--dg~~Lasg~~dg~~~~~~~~~I 331 (811)
..+..++|+|||++|+++ ++.|.+||+.++ ....+.+|... |.+++|+| |+++||+|+.|| .|
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg--------~v 90 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESG--------KV 90 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTS--------EE
T ss_pred CceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCC--------EE
Confidence 456889999999988766 489999999977 56778999999 99999999 999999999999 99
Q ss_pred EEEeCCCC--------cEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCC--ceEEEEEcccCCCcceEEEeeeCCC
Q psy9770 332 RIWNSVSL--------FTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGND--YNISVWDWQKSDRGHKITETKCSVD 401 (811)
Q Consensus 332 ~iWd~~t~--------~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d--~~i~vWd~~~~~~~~~~~~~~~~~~ 401 (811)
+|||+.++ +.+..+. .|...|.+++|+| +|++|++.+...+ +.|.+|| .++ .+..+..|..
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~--~~~~l~~~~~~~~~~~~v~~~d--~~~---~~~~~~~~~~ 161 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQ--VLAGPISDISWDF--EGRRLCVVGEGRDNFGVFISWD--SGN---SLGEVSGHSQ 161 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEE--CCSSCEEEEEECT--TSSEEEEEECCSSCSEEEEETT--TCC---EEEECCSCSS
T ss_pred EEEeCCCCcccccccccccchhh--cccccEEEEEEeC--CCCEEEEeccCCCCccEEEEEE--CCC---cceeeecCCc
Confidence 99999855 5666665 8999999999999 8999998533322 5666666 666 8899999999
Q ss_pred cEEEEEecCCCCC-eEEEECCCcEEEEEEcCCceeeeecccccccCCCCc---eEEEEEEcCC-Cc-EEEEcCCCcEEEE
Q psy9770 402 TVVAAEFHPLDRN-NIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPK---YVTCLAFTQG-GE-VLSGDSNGNIIVW 475 (811)
Q Consensus 402 ~V~~v~fsp~~~~-ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~---~v~~l~~s~~-g~-llsg~~dg~I~vw 475 (811)
.|.+++|+|++.. +++++.|+.|++||+.+++.+... ..|.. .|.+++|+|+ +. +++++.||.|++|
T Consensus 162 ~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw 234 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD-------RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCF 234 (615)
T ss_dssp CEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE-------CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEE
T ss_pred cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee-------cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 9999999998885 555566899999998866555443 44556 8999999999 88 5689999999999
Q ss_pred ecCCceEEEEeec---ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccc----cCCeEEEeeCCCCe
Q psy9770 476 TRGSNTISKFIRN---VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEH----LGGIRTVSEGRGSQ 548 (811)
Q Consensus 476 d~~~~~~~~~~~~---~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~----~~~v~~l~~~~~~~ 548 (811)
|+.+++.+..+.. .|...|.+++|+ ++.+|++++.||.|++||+..... ...+..+ ...+..+.++.+..
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (615)
T 1pgu_A 235 DGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKC--VQKWTLDKQQLGNQQVGVVATGNGR 311 (615)
T ss_dssp ETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEE--EEEEECCTTCGGGCEEEEEEEETTE
T ss_pred ECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcE--EEEEcCCCCcccCceeEEEeCCCCe
Confidence 9999999888844 799999999999 999999999999999999987665 2233322 35667777777788
Q ss_pred EEEEeCCCeEEEEEccCC-ceeeeeecccc---------------------------------eEEEEECCCCCeEEEEE
Q psy9770 549 LIVGTTRNCILVGSLNLG-FSPVVLGHTDE---------------------------------LWALAAHPSLSQFLTAG 594 (811)
Q Consensus 549 l~~~~~~~~i~~~d~~~~-~~~~~~~h~~~---------------------------------v~~l~~sp~~~~l~s~s 594 (811)
+++++.++.|++||+... ....+.+|... |.+++| +++..|++++
T Consensus 312 l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~ 390 (615)
T 1pgu_A 312 IISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSIS 390 (615)
T ss_dssp EEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEE
T ss_pred EEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEe
Confidence 888889999999988754 23344445444 445555 3367778888
Q ss_pred CCCeEEEEeCC----------------------------------CCcEEEEecCCCCeEEEEEcCCCCEEEEEEe-CCe
Q psy9770 595 FDRIVQLWDSM----------------------------------SHSVVWSKDIAEQAQSATFSPDGSIIIVGCI-AGR 639 (811)
Q Consensus 595 ~dg~v~iwd~~----------------------------------~~~~~~~~~~~~~v~~~~~spdg~~la~g~~-dg~ 639 (811)
.|+.|++||+. +++.+..+.+...+.+++|+ +++|++++. +|.
T Consensus 391 ~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~ 468 (615)
T 1pgu_A 391 WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNT 468 (615)
T ss_dssp TTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSC
T ss_pred CCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCe
Confidence 88888777764 34455555677889999998 889999999 999
Q ss_pred EEEEecCCccee-EEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecC-CCCCeeEEEeCC---
Q psy9770 640 WLVMDSETREAY-SIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTG-HSSFITHLDWSE--- 714 (811)
Q Consensus 640 i~i~d~~~~~~~-~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~-h~~~V~~l~~sp--- 714 (811)
|++||+.+++.. ..+..|...|++++|+|+|++|++++.||.|++||+.++ +.+..+.+ |...|++++|+|
T Consensus 469 i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~h~~~v~~~~~sp~~~ 544 (615)
T 1pgu_A 469 IQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSR----EVKTSRWAFRTSKINAISWKPAEK 544 (615)
T ss_dssp EEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEECCSCCCSSCEEEEEECCCC-
T ss_pred EEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCC----cceeEeecCCCCceeEEEEcCccc
Confidence 999999988766 677889999999999999999999999999999999886 56667777 999999999999
Q ss_pred -------CCCeEEEecCCceEEEEECCCC-cccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEE
Q psy9770 715 -------DSMYIRSNSGDYELLYWNAGTC-RQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVI 786 (811)
Q Consensus 715 -------dg~~L~s~s~Dg~i~iWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~L 786 (811)
++++|++++.||.|++||+.++ +.+..+ ..|...|++++|+|+++ |
T Consensus 545 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------------------~~h~~~v~~l~~s~~~~-l 598 (615)
T 1pgu_A 545 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAL-------------------------NAHKDGVNNLLWETPST-L 598 (615)
T ss_dssp -----CCSCCEEEEEETTSCEEEEESSCTTCCEEET-------------------------TSSTTCEEEEEEEETTE-E
T ss_pred cccccccCCCEEEEEcCCCcEEEEECCCCceechhh-------------------------hcCccceEEEEEcCCCC-e
Confidence 9999999999999999999887 333322 34678899999999999 9
Q ss_pred EEEcCCCcEEEEeCCC
Q psy9770 787 ATGDDFGKLKLYSYPA 802 (811)
Q Consensus 787 as~~~dg~v~vw~~~~ 802 (811)
++++.||.|++|+++.
T Consensus 599 ~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 599 VSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEETTSCEEEEEEC-
T ss_pred EEecCCceEEEEeeec
Confidence 9999999999999875
No 6
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.7e-55 Score=552.10 Aligned_cols=520 Identities=15% Similarity=0.212 Sum_probs=442.5
Q ss_pred CCccceEEccCCcEEEEec--cEEEEEeCCCCce-EEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCC
Q psy9770 261 DCRSNLYLLPTGEIVYFVA--AVAVLYNVEEQTQ-RHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSV 337 (811)
Q Consensus 261 ~~~~~l~~spdg~~l~~~~--~~i~i~d~~~~~~-~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~ 337 (811)
+.+.+++|+|||+++++++ +.|.+||+.+++. ..+.+|...|.+++|+|||++||+|+.|+ .|+|||+.
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~--------~v~vwd~~ 687 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADK--------KVKIWDSA 687 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS--------EEEEEETT
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCC--------eEEEEECC
Confidence 5678899999999999875 7999999998764 56889999999999999999999999999 99999999
Q ss_pred CCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEE
Q psy9770 338 SLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIV 417 (811)
Q Consensus 338 t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~ 417 (811)
+++.+..+. +|...|.+++|+|+.++.++++ ++.|+.|++||+.+++ ++..+.+|.+.|.+++|+|++..+++
T Consensus 688 ~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s--g~~d~~v~vwd~~~~~---~~~~~~~h~~~v~~~~~sp~~~~l~s 760 (1249)
T 3sfz_A 688 TGKLVHTYD--EHSEQVNCCHFTNKSNHLLLAT--GSNDFFLKLWDLNQKE---CRNTMFGHTNSVNHCRFSPDDELLAS 760 (1249)
T ss_dssp TCCEEEEEE--CCSSCEEEEEECSSSSCCEEEE--EETTSCEEEEETTSSS---EEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred CCceEEEEc--CCCCcEEEEEEecCCCceEEEE--EeCCCeEEEEECCCcc---hhheecCCCCCEEEEEEecCCCEEEE
Confidence 999999987 9999999999999545667776 7999999999999998 89999999999999999998888888
Q ss_pred EECCCcEEEEEEcCCceeeeeccc-----------------------------------------------c-cccCCCC
Q psy9770 418 TCGKSHINFWTIDAGGTLYKKQGI-----------------------------------------------F-EMIRDKP 449 (811)
Q Consensus 418 ~~~d~~i~iwd~~~~~~~~~~~~~-----------------------------------------------~-~~l~~~~ 449 (811)
++.|+.|++||+.++......... . ....+|.
T Consensus 761 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~ 840 (1249)
T 3sfz_A 761 CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH 840 (1249)
T ss_dssp EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSS
T ss_pred EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCC
Confidence 888999999999866543322100 0 0012567
Q ss_pred ceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccc-
Q psy9770 450 KYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGY- 527 (811)
Q Consensus 450 ~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~- 527 (811)
..+.+++|+|++. +++++.||.|++||+.++.....+. +|.+.|.+++|+|+|++|++++.||.|++|++.......
T Consensus 841 ~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~ 919 (1249)
T 3sfz_A 841 STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR-GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSA 919 (1249)
T ss_dssp SCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCS
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC-CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeee
Confidence 7899999999999 5599999999999999999999888 999999999999999999999999999999974311100
Q ss_pred ----------------------------------eeeeccccCCeEEEeeCCCCe-EEEEeCCCeEEEEEccCC-ceeee
Q psy9770 528 ----------------------------------EAQIAEHLGGIRTVSEGRGSQ-LIVGTTRNCILVGSLNLG-FSPVV 571 (811)
Q Consensus 528 ----------------------------------~~~~~~~~~~v~~l~~~~~~~-l~~~~~~~~i~~~d~~~~-~~~~~ 571 (811)
..........+.++++++++. +++++.+|.|.+|++..+ ....+
T Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~ 999 (1249)
T 3sfz_A 920 IVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSG 999 (1249)
T ss_dssp SSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEEC
T ss_pred ecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeec
Confidence 000111234688888888754 667889999999999876 44566
Q ss_pred eecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCccee
Q psy9770 572 LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAY 651 (811)
Q Consensus 572 ~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~ 651 (811)
.+|...|.+++|+|++++|++++.|+.|++||+.+++......+...+.+++|+|++ .+++++.||.|++||+.+++.+
T Consensus 1000 ~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~ 1078 (1249)
T 3sfz_A 1000 VGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIE 1078 (1249)
T ss_dssp CCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCC
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCcee
Confidence 789999999999999999999999999999999999988778889999999999976 5778889999999999999999
Q ss_pred EEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEE
Q psy9770 652 SIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYW 731 (811)
Q Consensus 652 ~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iW 731 (811)
..+.+|...|.+++|+|||++|++++.|+.|++||+.++. .+..+.+|...|++++|+|||++|++++.||.|++|
T Consensus 1079 ~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~----~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vw 1154 (1249)
T 3sfz_A 1079 RDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLS----PLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIW 1154 (1249)
T ss_dssp EEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSS----CSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcc----eeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 9999999999999999999999999999999999998863 445678999999999999999999999999999999
Q ss_pred ECCCCcccCCC-------------CCccceeEeccceeec--cceeeeCCCC---------CCCCccceEEecCCCCEEE
Q psy9770 732 NAGTCRQIPQS-------------SQLRDVVWESNSCTLT--FTTIGIWPEG---------ADGTDVNSCERSHDARVIA 787 (811)
Q Consensus 732 d~~~~~~~~~~-------------~~~~~~~~~~~~~~~~--~~~~~i~~~~---------~h~~~I~~l~~s~dg~~La 787 (811)
|+.+++.+..+ .....+.|+++...+. .....+|+.. .|...|++++|+|||++|+
T Consensus 1155 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~ 1234 (1249)
T 3sfz_A 1155 NVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYV 1234 (1249)
T ss_dssp ESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESSSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEE
T ss_pred ECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECCCeEEEEECCCCceeeeeeccCCcccEEEECCCCCEEE
Confidence 99999877654 2245567777665543 2345566532 3677889999999999999
Q ss_pred EEcCCCcEEEEeCC
Q psy9770 788 TGDDFGKLKLYSYP 801 (811)
Q Consensus 788 s~~~dg~v~vw~~~ 801 (811)
+++.||.|++|++.
T Consensus 1235 ~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1235 TVDNLGILYILQVL 1248 (1249)
T ss_dssp EECTTCCEEEECCC
T ss_pred EecCCcEEEEEeec
Confidence 99999999999875
No 7
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-52 Score=506.75 Aligned_cols=531 Identities=10% Similarity=0.113 Sum_probs=398.8
Q ss_pred EeeecCCCCccceEEccCCcEEEEec--cEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeE
Q psy9770 254 VYGYRGKDCRSNLYLLPTGEIVYFVA--AVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHI 331 (811)
Q Consensus 254 v~g~~~~~~~~~l~~spdg~~l~~~~--~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I 331 (811)
.+|+. +.+.+++|+|+|++||+++ +.|+||+..+.+......|...|.+++|+| |++||+++.|+ .|
T Consensus 13 ~~gh~--~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~--------~v 81 (902)
T 2oaj_A 13 KYGMS--SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKD--------TV 81 (902)
T ss_dssp EEECS--SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTC--------EE
T ss_pred ccCCC--CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcC--------eE
Confidence 34543 5678999999999999885 799999999887766677899999999999 88999999999 99
Q ss_pred EEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceE-----------EEeeeCC
Q psy9770 332 RIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKI-----------TETKCSV 400 (811)
Q Consensus 332 ~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~-----------~~~~~~~ 400 (811)
+|||+.+++.+..+. |...|.+++|+| ++++|++ ++.|+.|++||+++++ .. ..+.+|.
T Consensus 82 ~lWd~~~~~~~~~~~---~~~~V~~v~~sp--~g~~l~s--gs~dg~V~lwd~~~~~---~~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 82 YVLSLYSQKVLTTVF---VPGKITSIDTDA--SLDWMLI--GLQNGSMIVYDIDRDQ---LSSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp EEEETTTCSEEEEEE---CSSCEEEEECCT--TCSEEEE--EETTSCEEEEETTTTE---EEEEEECCHHHHHTCSSSCC
T ss_pred EEEECCCCcEEEEEc---CCCCEEEEEECC--CCCEEEE--EcCCCcEEEEECCCCc---cccceeccccccccccccCC
Confidence 999999999999884 668999999999 8999998 7899999999999876 32 2235688
Q ss_pred CcEEEEEecCCC-CCeEEEECCCcEEEEEEcCCceeeeeccccc-----------ccCCCCceEEEEEEcCCCc-EEEEc
Q psy9770 401 DTVVAAEFHPLD-RNNIVTCGKSHINFWTIDAGGTLYKKQGIFE-----------MIRDKPKYVTCLAFTQGGE-VLSGD 467 (811)
Q Consensus 401 ~~V~~v~fsp~~-~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~-----------~l~~~~~~v~~l~~s~~g~-llsg~ 467 (811)
+.|.+++|+|++ ..+++++.|+.| +||+.++..+........ ....|...|.+++|+|+|. +++|+
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs 230 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH 230 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE
Confidence 999999999975 455666668999 999997766555433210 0123457799999999998 66999
Q ss_pred CCCcEEEEecCCceEEEE--ee--cc-------------cccceEEEEEec----CC-cEEEEecCC-----CcEEEEeC
Q psy9770 468 SNGNIIVWTRGSNTISKF--IR--NV-------------HEGSVFSICVLK----EG-SIISAGGKD-----GRLLQFDS 520 (811)
Q Consensus 468 ~dg~I~vwd~~~~~~~~~--~~--~~-------------h~~~V~~l~~s~----dg-~~l~s~s~d-----g~I~~wd~ 520 (811)
.||.|++||+.+++.+.. +. .. |...|.+++|++ ++ .+|++|+.| ..+.+|++
T Consensus 231 ~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 231 EDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp TTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 999999999998887653 21 01 345799999964 43 567777665 37889985
Q ss_pred CC------------------CCccceeeec-cccCCeEEEeeCC-----------CCeEEEEeCCCeEEEEEccCCcee-
Q psy9770 521 NL------------------QPTGYEAQIA-EHLGGIRTVSEGR-----------GSQLIVGTTRNCILVGSLNLGFSP- 569 (811)
Q Consensus 521 ~~------------------~~~~~~~~~~-~~~~~v~~l~~~~-----------~~~l~~~~~~~~i~~~d~~~~~~~- 569 (811)
.. ... ...+. .+...+..+.+.+ ...+++++.++.|++|++..+...
T Consensus 311 ~~~~~~~~~s~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~ 388 (902)
T 2oaj_A 311 GYTPRYSITSYEGMKNYYANPKQ--MKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTD 388 (902)
T ss_dssp EECCCGGGCCHHHHHHHHHSCSE--EEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEEC
T ss_pred CCCCCccccchhhhhhhhcCccc--eEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCccc
Confidence 21 111 11121 2445666666533 126788889999999998654211
Q ss_pred -------e----------------------------------eeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCc
Q psy9770 570 -------V----------------------------------VLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHS 608 (811)
Q Consensus 570 -------~----------------------------------~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~ 608 (811)
. +.+|...+..++|+|++++|++|+.|++|++||+.++.
T Consensus 389 ~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~ 468 (902)
T 2oaj_A 389 KASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGD 468 (902)
T ss_dssp CGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCT
T ss_pred ccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCcc
Confidence 1 22344445556668999999999999999999998774
Q ss_pred EE----EE--e------cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcc---------------------------
Q psy9770 609 VV----WS--K------DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETRE--------------------------- 649 (811)
Q Consensus 609 ~~----~~--~------~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~--------------------------- 649 (811)
.. .. + .+...|.+++|+|||++||+|+.||.|+|||+.+++
T Consensus 469 ~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (902)
T 2oaj_A 469 IQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNG 548 (902)
T ss_dssp TTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSC
T ss_pred ccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcc
Confidence 21 11 1 567789999999999999999999999999998662
Q ss_pred ------------------eeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCccee-EEEEec-CCCCCeeE
Q psy9770 650 ------------------AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYS-RVGRCT-GHSSFITH 709 (811)
Q Consensus 650 ------------------~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~-~~~~~~-~h~~~V~~ 709 (811)
++..+.+|.+.|++++||||| +||+|+.|++|+|||+.+....+. .+..+. +|...|++
T Consensus 549 ~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~s 627 (902)
T 2oaj_A 549 VLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTC 627 (902)
T ss_dssp SEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEE
T ss_pred ccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEE
Confidence 367788899999999999999 999999999999999877522111 001233 89999999
Q ss_pred EEeC-----CCC---CeEEEecCCceEEEEEC---CCCcccCCCCCcc---------cee-Eec----------------
Q psy9770 710 LDWS-----EDS---MYIRSNSGDYELLYWNA---GTCRQIPQSSQLR---------DVV-WES---------------- 752 (811)
Q Consensus 710 l~~s-----pdg---~~L~s~s~Dg~i~iWd~---~~~~~~~~~~~~~---------~~~-~~~---------------- 752 (811)
|+|+ ||| ++|++++.|++|++||+ .+|+....+.... .+. +..
T Consensus 628 v~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l 707 (902)
T 2oaj_A 628 IEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNL 707 (902)
T ss_dssp EEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGG
T ss_pred EEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhcc
Confidence 9999 885 89999999999999999 6776544332211 111 221
Q ss_pred ------cceee--ccceeeeCCCCC---------CCCccceE---E------ecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q psy9770 753 ------NSCTL--TFTTIGIWPEGA---------DGTDVNSC---E------RSHDARVIATGDDFGKLKLYSYPAVQPK 806 (811)
Q Consensus 753 ------~~~~~--~~~~~~i~~~~~---------h~~~I~~l---~------~s~dg~~Las~~~dg~v~vw~~~~~~~~ 806 (811)
+..++ .-....+|.... |...+.++ . |++++..|++++.||+|++|++|+++.+
T Consensus 708 ~~~~~~~~~~l~~~~~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~ 787 (902)
T 2oaj_A 708 SKGLCIPGIVLITGFDDIRLITLGKSKSTHKGFKYPLAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQ 787 (902)
T ss_dssp GGTCCCCEEEEEECSSEEEEECTTCCCEEEEECSSCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCCCCeEEEEEeccceEEEeCccccceeeEcccceeeeEEEEEEeccccccccCceEEEEEeCCCcEEEEECcchHHH
Confidence 11111 123345555432 34455565 5 7899999999999999999999999876
Q ss_pred Ccc
Q psy9770 807 LCL 809 (811)
Q Consensus 807 ~~~ 809 (811)
..+
T Consensus 788 ~~~ 790 (902)
T 2oaj_A 788 MSE 790 (902)
T ss_dssp EEE
T ss_pred hhc
Confidence 544
No 8
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.4e-51 Score=512.85 Aligned_cols=460 Identities=15% Similarity=0.149 Sum_probs=399.9
Q ss_pred EEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEe
Q psy9770 293 RHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVD 372 (811)
Q Consensus 293 ~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~ 372 (811)
..+.+|.+.|.+++|+|||++||+|+.|| .|+|||+.+++.+..+. +|...|.+++|+| +|++|++
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~--------~i~vw~~~~~~~~~~~~--~h~~~v~~~~~s~--~~~~l~s-- 674 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADK--------TLQVFKAETGEKLLDIK--AHEDEVLCCAFSS--DDSYIAT-- 674 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEEEEC--CCSSCEEEEEECT--TSSEEEE--
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCC--------eEEEEECCCCCEEEEec--cCCCCEEEEEEec--CCCEEEE--
Confidence 56789999999999999999999999999 99999999999999987 9999999999999 8999998
Q ss_pred CCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCC--CeEEEECCCcEEEEEEcCCceeeeecccccccCCCCc
Q psy9770 373 EGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDR--NNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPK 450 (811)
Q Consensus 373 ~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~--~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~ 450 (811)
++.|+.|+|||+.+++ .+..+.+|...|.+++|+|++. .+++++.|+.|++||+.++..+... .+|..
T Consensus 675 ~~~d~~v~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~-------~~h~~ 744 (1249)
T 3sfz_A 675 CSADKKVKIWDSATGK---LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM-------FGHTN 744 (1249)
T ss_dssp EETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE-------CCCSS
T ss_pred EeCCCeEEEEECCCCc---eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee-------cCCCC
Confidence 6899999999999999 9999999999999999999643 3444455899999999977766554 56778
Q ss_pred eEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEe-------------------------------------------
Q psy9770 451 YVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFI------------------------------------------- 486 (811)
Q Consensus 451 ~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~------------------------------------------- 486 (811)
.|.+++|+|++. +++++.||.|++||+.++.....+
T Consensus 745 ~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~ 824 (1249)
T 3sfz_A 745 SVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLF 824 (1249)
T ss_dssp CEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEE
T ss_pred CEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEE
Confidence 899999999998 569999999999998776543322
Q ss_pred -----------ecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCC-eEEEEeC
Q psy9770 487 -----------RNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGS-QLIVGTT 554 (811)
Q Consensus 487 -----------~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~l~~~~~ 554 (811)
..+|...|.+++|+|++.++++++.||.|++||+..... ...+.+|...|.++++++++ .+++++.
T Consensus 825 d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~h~~~v~~v~~spdg~~l~s~s~ 902 (1249)
T 3sfz_A 825 DIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK--VADCRGHLSWVHGVMFSPDGSSFLTASD 902 (1249)
T ss_dssp ETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE--EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce--eeecCCCccceEEEEECCCCCEEEEEeC
Confidence 126788899999999999999999999999999987765 56778899999999999886 5777899
Q ss_pred CCeEEEEEccCCc--------------------------------------eeeeeecccceEEEEECCCCCeEEEEECC
Q psy9770 555 RNCILVGSLNLGF--------------------------------------SPVVLGHTDELWALAAHPSLSQFLTAGFD 596 (811)
Q Consensus 555 ~~~i~~~d~~~~~--------------------------------------~~~~~~h~~~v~~l~~sp~~~~l~s~s~d 596 (811)
++.|++|++.... ......+...+.+++|+|+++++++++.|
T Consensus 903 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~ 982 (1249)
T 3sfz_A 903 DQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDED 982 (1249)
T ss_dssp TSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCC
Confidence 9999999965310 00112234579999999999999999999
Q ss_pred CeEEEEeCCCCcEEEE-ecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEE
Q psy9770 597 RIVQLWDSMSHSVVWS-KDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLAL 675 (811)
Q Consensus 597 g~v~iwd~~~~~~~~~-~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~las 675 (811)
|.|++||+.+++.... ..+...|.+++|+|+|++|++++.||.|++||+.+++... +..|...|.+++|+|++ .+++
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~v~~~~~~~~~-~l~~ 1060 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQDS-RLLS 1060 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEEC-CBCCSSCEEEEEECSSS-EEEE
T ss_pred CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEE-EecCCCcEEEEEEcCCC-cEEE
Confidence 9999999999988776 4678899999999999999999999999999999987764 55788999999999976 5678
Q ss_pred EecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccce
Q psy9770 676 GSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSC 755 (811)
Q Consensus 676 gs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~ 755 (811)
++.|+.|++||+.++ +.+..+.+|...|++++|+||+++|++++.||.|++||+.+++.+..+.
T Consensus 1061 ~~~dg~v~vwd~~~~----~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~------------ 1124 (1249)
T 3sfz_A 1061 WSFDGTVKVWNVITG----RIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELK------------ 1124 (1249)
T ss_dssp EESSSEEEEEETTTT----CCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCC------------
T ss_pred EECCCcEEEEECCCC----ceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeec------------
Confidence 889999999999987 3455678999999999999999999999999999999999887665432
Q ss_pred eeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCCCCCcc
Q psy9770 756 TLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQPKLCL 809 (811)
Q Consensus 756 ~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~~~~~ 809 (811)
.|...|++++|+|||++||+|+.||.|++||+.+++....+
T Consensus 1125 -------------~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~ 1165 (1249)
T 3sfz_A 1125 -------------GHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSC 1165 (1249)
T ss_dssp -------------CCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCC
T ss_pred -------------cCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEe
Confidence 46778999999999999999999999999999998876553
No 9
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-51 Score=490.44 Aligned_cols=469 Identities=12% Similarity=0.081 Sum_probs=366.0
Q ss_pred eccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCC
Q psy9770 295 YLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEG 374 (811)
Q Consensus 295 ~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s 374 (811)
..+|...|+|++|+|++++||+|+.|| .|+|||..+++.+..+ .|...|.+++|+| |++|++ ++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg--------~I~lw~~~~~~~~~~~---~~~~~V~~l~fsp---g~~L~S--~s 76 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTG--------EVHIYGQQQVEVVIKL---EDRSAIKEMRFVK---GIYLVV--IN 76 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTS--------EEEEECSTTCEEEEEC---SSCCCEEEEEEET---TTEEEE--EE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCC--------EEEEEeCCCcEEEEEc---CCCCCEEEEEEcC---CCEEEE--EE
Confidence 458999999999999999999999999 9999999988877665 4788999999998 568888 68
Q ss_pred CCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeec-ccc---cccCCCCc
Q psy9770 375 NDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQ-GIF---EMIRDKPK 450 (811)
Q Consensus 375 ~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~-~~~---~~l~~~~~ 450 (811)
.|++|+|||+++++ ++..+. |.+.|.+++|+|++..+++++.||.|++||+.++....... ... ..+.+|..
T Consensus 77 ~D~~v~lWd~~~~~---~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~ 152 (902)
T 2oaj_A 77 AKDTVYVLSLYSQK---VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS 152 (902)
T ss_dssp TTCEEEEEETTTCS---EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC
T ss_pred CcCeEEEEECCCCc---EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCC
Confidence 99999999999988 777775 67899999999999999999999999999998654321110 000 12366888
Q ss_pred eEEEEEEcCCC--cEEEEcCCCcEEEEecCCceEEEEeeccc------------------ccceEEEEEecCCcEEEEec
Q psy9770 451 YVTCLAFTQGG--EVLSGDSNGNIIVWTRGSNTISKFIRNVH------------------EGSVFSICVLKEGSIISAGG 510 (811)
Q Consensus 451 ~v~~l~~s~~g--~llsg~~dg~I~vwd~~~~~~~~~~~~~h------------------~~~V~~l~~s~dg~~l~s~s 510 (811)
.|.+++|+|++ .+++|+.||.| +||+.+++....+. .| ...|.+++|+|+|.+|++++
T Consensus 153 ~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs 230 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFI-YELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH 230 (902)
T ss_dssp CCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEEC-CCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE
T ss_pred CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEe-cccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE
Confidence 99999999974 36799999999 99999999888776 44 57899999999999999999
Q ss_pred CCCcEEEEeCCCCCccceeee---c-------------cccCCeEEEeeC----CCC-eE-EEEeCC-----CeEEEEEc
Q psy9770 511 KDGRLLQFDSNLQPTGYEAQI---A-------------EHLGGIRTVSEG----RGS-QL-IVGTTR-----NCILVGSL 563 (811)
Q Consensus 511 ~dg~I~~wd~~~~~~~~~~~~---~-------------~~~~~v~~l~~~----~~~-~l-~~~~~~-----~~i~~~d~ 563 (811)
.||.|++||+.+++......+ . .+...|.+++|. |++ .+ ++++.+ ..+.+|++
T Consensus 231 ~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 231 EDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp TTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 999999999987665221111 1 134578999984 442 44 445444 37888885
Q ss_pred cC------------------C-ceeeee-ecccceEEEEECC----------CCCeEEEEECCCeEEEEeCCCCcEEEE-
Q psy9770 564 NL------------------G-FSPVVL-GHTDELWALAAHP----------SLSQFLTAGFDRIVQLWDSMSHSVVWS- 612 (811)
Q Consensus 564 ~~------------------~-~~~~~~-~h~~~v~~l~~sp----------~~~~l~s~s~dg~v~iwd~~~~~~~~~- 612 (811)
.. . ....+. .|...|.++.+.+ +...+++++.|+.|++||+.++.....
T Consensus 311 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~ 390 (902)
T 2oaj_A 311 GYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKA 390 (902)
T ss_dssp EECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCG
T ss_pred CCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCccccc
Confidence 31 1 122222 4677888888865 234788999999999999977643321
Q ss_pred -------ecCCCC----------------------------------eEEEEEcCCCCEEEEEEeCCeEEEEecCCccee
Q psy9770 613 -------KDIAEQ----------------------------------AQSATFSPDGSIIIVGCIAGRWLVMDSETREAY 651 (811)
Q Consensus 613 -------~~~~~~----------------------------------v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~ 651 (811)
..+... +.+++|+|++++|++|+.||.|++||+.++...
T Consensus 391 ~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~ 470 (902)
T 2oaj_A 391 SLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQ 470 (902)
T ss_dssp GGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTT
T ss_pred ccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCcccc
Confidence 011123 344566899999999999999999999887532
Q ss_pred ----EE--ec-----CCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCc----------------------------
Q psy9770 652 ----SI--HT-----DGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR---------------------------- 692 (811)
Q Consensus 652 ----~~--~~-----~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~---------------------------- 692 (811)
.. +. +|...|.+++|+|||++||+|+.||+|+||++.++..
T Consensus 471 ~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (902)
T 2oaj_A 471 DNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVL 550 (902)
T ss_dssp TTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSE
T ss_pred CCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccc
Confidence 11 11 7888999999999999999999999999999987521
Q ss_pred -------------ceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeecc
Q psy9770 693 -------------KYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTF 759 (811)
Q Consensus 693 -------------~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (811)
.++++..+.+|.+.|++|+||||| +||+|+.|++|++||++++..+.... .+
T Consensus 551 ~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~-~~------------- 615 (902)
T 2oaj_A 551 VDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMEN-IR------------- 615 (902)
T ss_dssp EECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEE-GG-------------
T ss_pred ccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEee-hh-------------
Confidence 024567788999999999999999 99999999999999998766542100 00
Q ss_pred ceeeeCCC-CCCCCccceEEec-----CCC---CEEEEEcCCCcEEEEeC---CCCCCC
Q psy9770 760 TTIGIWPE-GADGTDVNSCERS-----HDA---RVIATGDDFGKLKLYSY---PAVQPK 806 (811)
Q Consensus 760 ~~~~i~~~-~~h~~~I~~l~~s-----~dg---~~Las~~~dg~v~vw~~---~~~~~~ 806 (811)
.. .+|...|++|+|+ ||| ++|++|+.||+|++|++ .+|+..
T Consensus 616 ------~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~ 668 (902)
T 2oaj_A 616 ------EISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFD 668 (902)
T ss_dssp ------GTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEE
T ss_pred ------HhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEE
Confidence 01 2578889999999 886 89999999999999999 566543
No 10
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.3e-48 Score=452.10 Aligned_cols=446 Identities=13% Similarity=0.138 Sum_probs=369.5
Q ss_pred CC-ccceEEcc--CCcEEEEec--cEEEEEeCCCC---------ceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCC
Q psy9770 261 DC-RSNLYLLP--TGEIVYFVA--AVAVLYNVEEQ---------TQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDARE 326 (811)
Q Consensus 261 ~~-~~~l~~sp--dg~~l~~~~--~~i~i~d~~~~---------~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~ 326 (811)
+. +..++|+| +|++|++++ +.|.+||+.++ ....+.+|...|.+++|+|++++|++++.+. .
T Consensus 64 ~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~----~ 139 (615)
T 1pgu_A 64 SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR----D 139 (615)
T ss_dssp TSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS----S
T ss_pred CceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCC----C
Confidence 44 68899999 999999875 79999999643 2355778999999999999999999998772 0
Q ss_pred CCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCc-EEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCC---c
Q psy9770 327 GKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGT-FLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVD---T 402 (811)
Q Consensus 327 ~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~-~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~---~ 402 (811)
....|++|| +++.+..+. +|...|.+++|+| ++. +|++ ++.|+.|++||+.+++ .+..+..|.. .
T Consensus 140 ~~~~v~~~d--~~~~~~~~~--~~~~~v~~~~~~~--~~~~~l~~--~~~d~~v~vwd~~~~~---~~~~~~~~~~~~~~ 208 (615)
T 1pgu_A 140 NFGVFISWD--SGNSLGEVS--GHSQRINACHLKQ--SRPMRSMT--VGDDGSVVFYQGPPFK---FSASDRTHHKQGSF 208 (615)
T ss_dssp CSEEEEETT--TCCEEEECC--SCSSCEEEEEECS--SSSCEEEE--EETTTEEEEEETTTBE---EEEEECSSSCTTCC
T ss_pred CccEEEEEE--CCCcceeee--cCCccEEEEEECC--CCCcEEEE--EeCCCcEEEEeCCCcc---eeeeecccCCCCce
Confidence 011788888 677888876 9999999999999 676 6776 7899999999999888 8899999999 9
Q ss_pred EEEEEecCC-CCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCc
Q psy9770 403 VVAAEFHPL-DRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSN 480 (811)
Q Consensus 403 V~~v~fsp~-~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~ 480 (811)
|.+++|+|+ +..+++++.++.|++||+.+++.+..... ....|...|.+++|+ ++. +++++.||.|++||+.++
T Consensus 209 v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED---DQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB---TTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecc---cccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC
Confidence 999999998 77777778899999999997766654310 001577889999999 887 669999999999999999
Q ss_pred eEEEEeeccc----ccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeecc-----------------------
Q psy9770 481 TISKFIRNVH----EGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAE----------------------- 533 (811)
Q Consensus 481 ~~~~~~~~~h----~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~----------------------- 533 (811)
+....+. .+ ...+.++.|. ++.++++++.||.|++||+..... ...+..
T Consensus 285 ~~~~~~~-~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~--~~~~~~~~~~v~~~~~~~l~~~~~dg~i~ 360 (615)
T 1pgu_A 285 KCVQKWT-LDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEV--LKTISGHNKGITALTVNPLISGSYDGRIM 360 (615)
T ss_dssp EEEEEEE-CCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEE--EEEECCCSSCEEEEETTTTEEEETTSCEE
T ss_pred cEEEEEc-CCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcE--EEEEeCCCCCEEEEEecCcEEECCCCeEE
Confidence 9888887 44 4778888886 888999999999999999976443 233333
Q ss_pred ----------ccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCC----------------------------------cee
Q psy9770 534 ----------HLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLG----------------------------------FSP 569 (811)
Q Consensus 534 ----------~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~----------------------------------~~~ 569 (811)
|...|.++++.++..+++++.++.+++|++... ...
T Consensus 361 ~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (615)
T 1pgu_A 361 EWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII 440 (615)
T ss_dssp ETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCcee
Confidence 444555555555667777777777777776431 111
Q ss_pred eeeecccceEEEEECCCCCeEEEEEC-CCeEEEEeCCCCcEE-EE-ecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecC
Q psy9770 570 VVLGHTDELWALAAHPSLSQFLTAGF-DRIVQLWDSMSHSVV-WS-KDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSE 646 (811)
Q Consensus 570 ~~~~h~~~v~~l~~sp~~~~l~s~s~-dg~v~iwd~~~~~~~-~~-~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~ 646 (811)
....|...+.+++|+ +++|++++. |+.|++||+.+++.. .. ..+...|.+++|+|+|++|++++.||.|++||+.
T Consensus 441 ~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 518 (615)
T 1pgu_A 441 KSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQ 518 (615)
T ss_dssp EEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eecccCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCC
Confidence 222467789999999 889999999 999999999988764 22 4577899999999999999999999999999999
Q ss_pred CcceeEEecC-CCCCeEEEEEcc----------CCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCC
Q psy9770 647 TREAYSIHTD-GNEPIQVVKFSP----------DGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSED 715 (811)
Q Consensus 647 ~~~~~~~~~~-~~~~i~~i~~sp----------dg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spd 715 (811)
+++.+..+.+ |...|++++|+| ++++||+++.||.|++|++.++. +.+..+.+|...|++++|+|+
T Consensus 519 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~h~~~v~~l~~s~~ 595 (615)
T 1pgu_A 519 SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM---KIIKALNAHKDGVNNLLWETP 595 (615)
T ss_dssp TTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT---CCEEETTSSTTCEEEEEEEET
T ss_pred CCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc---eechhhhcCccceEEEEEcCC
Confidence 9999999888 999999999999 99999999999999999998863 355678999999999999999
Q ss_pred CCeEEEecCCceEEEEECCC
Q psy9770 716 SMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 716 g~~L~s~s~Dg~i~iWd~~~ 735 (811)
++ |++++.||.|++|++.+
T Consensus 596 ~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 596 ST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp TE-EEEEETTSCEEEEEEC-
T ss_pred CC-eEEecCCceEEEEeeec
Confidence 99 99999999999999875
No 11
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.8e-45 Score=442.38 Aligned_cols=437 Identities=16% Similarity=0.276 Sum_probs=365.2
Q ss_pred ceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEE
Q psy9770 291 TQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCA 370 (811)
Q Consensus 291 ~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Las 370 (811)
.++.+.+|.+.|.+++|+|||++||+|+.+| .|+|||+.+++.+..+. +|...|.+++|+| +|++|++
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g--------~v~iwd~~~~~~~~~~~--~~~~~v~~~~~s~--~~~~l~~ 72 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSG--------RVEIWNYETQVEVRSIQ--VTETPVRAGKFIA--RKNWIIV 72 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTS--------EEEEEETTTTEEEEEEE--CCSSCEEEEEEEG--GGTEEEE
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCC--------EEEEEECCCCceEEEEe--cCCCcEEEEEEeC--CCCEEEE
Confidence 3567899999999999999999999999999 99999999999999987 8999999999999 8999998
Q ss_pred EeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCc
Q psy9770 371 VDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPK 450 (811)
Q Consensus 371 v~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~ 450 (811)
++.|+.|+|||+.+++ .+..+..|.+.|.+++|+|++..+++++.|+.|++|++.++...... +.+|..
T Consensus 73 --~~~dg~i~vw~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~------~~~~~~ 141 (814)
T 3mkq_A 73 --GSDDFRIRVFNYNTGE---KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT------FEGHEH 141 (814)
T ss_dssp --EETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE------EECCSS
T ss_pred --EeCCCeEEEEECCCCc---EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE------EcCCCC
Confidence 6889999999999998 89999999999999999999888888888999999999866333322 155778
Q ss_pred eEEEEEEcC-CCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEec--CCcEEEEecCCCcEEEEeCCCCCcc
Q psy9770 451 YVTCLAFTQ-GGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLK--EGSIISAGGKDGRLLQFDSNLQPTG 526 (811)
Q Consensus 451 ~v~~l~~s~-~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~--dg~~l~s~s~dg~I~~wd~~~~~~~ 526 (811)
.|.+++|+| ++. +++++.||.|++||+.++.....+...|...|.+++|+| ++.+|++++.||.|++||+.....
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~- 220 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC- 220 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE-
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE-
Confidence 899999999 676 669999999999999988877777745668999999999 999999999999999999987665
Q ss_pred ceeeeccccCCeEEEeeCCCC-eEEEEeCCCeEEEEEccCC-ceeeeeecccceEEEEECCCCCe-EEEEECCCeEEEEe
Q psy9770 527 YEAQIAEHLGGIRTVSEGRGS-QLIVGTTRNCILVGSLNLG-FSPVVLGHTDELWALAAHPSLSQ-FLTAGFDRIVQLWD 603 (811)
Q Consensus 527 ~~~~~~~~~~~v~~l~~~~~~-~l~~~~~~~~i~~~d~~~~-~~~~~~~h~~~v~~l~~sp~~~~-l~s~s~dg~v~iwd 603 (811)
...+..|...|.++++++++ .+++++.++.|++||+.+. ....+..|...+.+++|+|++.. +++++.++.+.+|+
T Consensus 221 -~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (814)
T 3mkq_A 221 -VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (814)
T ss_dssp -EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEE
T ss_pred -EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEE
Confidence 56677888999999999986 5677888999999999875 45567788899999999999873 34555577888998
Q ss_pred CCCCc----------EEEE----------------------------------ecCCCCeEEEEEcCCCCEEEEEEeCCe
Q psy9770 604 SMSHS----------VVWS----------------------------------KDIAEQAQSATFSPDGSIIIVGCIAGR 639 (811)
Q Consensus 604 ~~~~~----------~~~~----------------------------------~~~~~~v~~~~~spdg~~la~g~~dg~ 639 (811)
+.... .+.. ..+...+.+++|+|+|+++++++ +|.
T Consensus 300 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~ 378 (814)
T 3mkq_A 300 LGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGE 378 (814)
T ss_dssp CSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTE
T ss_pred cCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCE
Confidence 76432 2111 11233578999999999999988 899
Q ss_pred EEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCC---
Q psy9770 640 WLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDS--- 716 (811)
Q Consensus 640 i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg--- 716 (811)
+.+|++....... .+.+.+++|+|||++||+++.++.|++|+. +.+|...|.++.|+|++
T Consensus 379 ~~i~~~~~~~~~~-----~~~i~~~~~spdg~~la~~~~~g~v~l~~~------------~~~~~~~v~~~~~s~dg~~~ 441 (814)
T 3mkq_A 379 YVIYTALAWRNKA-----FGKCQDFVWGPDSNSYALIDETGQIKYYKN------------FKEVTSWSVPMHSAIDRLFS 441 (814)
T ss_dssp EEEEETTTTEEEE-----EEECSEEEECTTSSCEEEECTTCCEEEEET------------TEECTTCCCCCSSCCCEEEC
T ss_pred EEEEECccccccC-----CCceEEEEEeCCCCeEEEEeCCCcEEEEEC------------CCCccceEEcCCcCccceec
Confidence 9999986544322 356889999999999999999999999952 24577889999999998
Q ss_pred CeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEE------c
Q psy9770 717 MYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATG------D 790 (811)
Q Consensus 717 ~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~------~ 790 (811)
.+|++++.|+.|++||+.+++.+..+.. |. ..++|+|||++|+++ +
T Consensus 442 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~-------------------------~~---~~v~~s~dg~~la~~~~~~~~~ 493 (814)
T 3mkq_A 442 GALLGVKSDGFVYFFDWDNGTLVRRIDV-------------------------NA---KDVIWSDNGELVMIVNTNSNGD 493 (814)
T ss_dssp SSSEEEEETTEEEEECTTTCCEEEEESS-------------------------CE---EEEEECTTSSEEEEEECCCSSC
T ss_pred ceEEEEecCCEEEEEECCcCcEEEEEec-------------------------CC---CEEEEcCCCCEEEEEEcCcccC
Confidence 6888999999999999999876654321 11 289999999999999 6
Q ss_pred CCCcEEEE
Q psy9770 791 DFGKLKLY 798 (811)
Q Consensus 791 ~dg~v~vw 798 (811)
.++.+.+|
T Consensus 494 ~~~~~~~~ 501 (814)
T 3mkq_A 494 EASGYTLL 501 (814)
T ss_dssp SCSEEEEE
T ss_pred CceEEEEE
Confidence 66544444
No 12
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.6e-45 Score=438.12 Aligned_cols=497 Identities=13% Similarity=0.140 Sum_probs=391.3
Q ss_pred CCccceEEccCCcEEEEec--cEEEEEeCCCCce-EEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCC
Q psy9770 261 DCRSNLYLLPTGEIVYFVA--AVAVLYNVEEQTQ-RHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSV 337 (811)
Q Consensus 261 ~~~~~l~~spdg~~l~~~~--~~i~i~d~~~~~~-~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~ 337 (811)
+.+..++|+|+|.+|++++ +.|.|||+.++.. ..+.+|...|.+++|+|++++||+|+.+| .|+|||+.
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------~i~vw~~~ 85 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF--------RIRVFNYN 85 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS--------EEEEEETT
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCC--------eEEEEECC
Confidence 4578999999999999884 7999999988754 56788999999999999999999999999 99999999
Q ss_pred CCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecC-CCCCeE
Q psy9770 338 SLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHP-LDRNNI 416 (811)
Q Consensus 338 t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp-~~~~ll 416 (811)
+++.+..+. +|...|.+++|+| +|.+|++ ++.|+.|++||++++.. ....+..|...|.+++|+| ++..++
T Consensus 86 ~~~~~~~~~--~~~~~v~~~~~s~--~~~~l~~--~~~dg~i~vw~~~~~~~--~~~~~~~~~~~v~~~~~~p~~~~~l~ 157 (814)
T 3mkq_A 86 TGEKVVDFE--AHPDYIRSIAVHP--TKPYVLS--GSDDLTVKLWNWENNWA--LEQTFEGHEHFVMCVAFNPKDPSTFA 157 (814)
T ss_dssp TCCEEEEEE--CCSSCEEEEEECS--SSSEEEE--EETTSEEEEEEGGGTSE--EEEEEECCSSCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEe--cCCCCEEEEEEeC--CCCEEEE--EcCCCEEEEEECCCCce--EEEEEcCCCCcEEEEEEEcCCCCEEE
Confidence 999999987 8999999999999 8999988 78999999999998731 6778889999999999999 666777
Q ss_pred EEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcC--CCc-EEEEcCCCcEEEEecCCceEEEEeecccccc
Q psy9770 417 VTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQ--GGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGS 493 (811)
Q Consensus 417 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~--~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~ 493 (811)
+++.|+.|++|++.++....... ..+...+.+++|+| ++. +++++.||.|++||+.+++....+. .|...
T Consensus 158 ~~~~dg~v~vwd~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~ 230 (814)
T 3mkq_A 158 SGCLDRTVKVWSLGQSTPNFTLT------TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE-GHMSN 230 (814)
T ss_dssp EEETTSEEEEEETTCSSCSEEEE------CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE-CCSSC
T ss_pred EEeCCCeEEEEECCCCcceeEEe------cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc-CCCCC
Confidence 77779999999998665544332 23346799999999 777 6699999999999999999998888 89999
Q ss_pred eEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCe--EEEEeCCCeEEEEEccCCce---
Q psy9770 494 VFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQ--LIVGTTRNCILVGSLNLGFS--- 568 (811)
Q Consensus 494 V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~--l~~~~~~~~i~~~d~~~~~~--- 568 (811)
|.+++|+|++.+|++++.||.|++||+..... ...+..+...+.++++++++. +++.+.++.+.+|++.....
T Consensus 231 v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (814)
T 3mkq_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV--EKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLS 308 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCSE--EEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE--EEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeE
Confidence 99999999999999999999999999987665 566677788999999999875 56677778888887653210
Q ss_pred -----------------------------------------eeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCC
Q psy9770 569 -----------------------------------------PVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH 607 (811)
Q Consensus 569 -----------------------------------------~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~ 607 (811)
..+..+...+.+++|+|+++++++++ |+.+.+|++...
T Consensus 309 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~ 387 (814)
T 3mkq_A 309 LDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAW 387 (814)
T ss_dssp ECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred ECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccc
Confidence 01123445688999999999999998 899999998755
Q ss_pred cEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCC---CEEEEEecCCcEEE
Q psy9770 608 SVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDG---KLLALGSRDNYIYV 684 (811)
Q Consensus 608 ~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg---~~lasgs~dg~I~i 684 (811)
.... .+.+.+++|+|+|+++++++.+|.|++|+. +.+|...+.+++|+||| .+|++++.|+.|++
T Consensus 388 ~~~~----~~~i~~~~~spdg~~la~~~~~g~v~l~~~--------~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~ 455 (814)
T 3mkq_A 388 RNKA----FGKCQDFVWGPDSNSYALIDETGQIKYYKN--------FKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYF 455 (814)
T ss_dssp EEEE----EEECSEEEECTTSSCEEEECTTCCEEEEET--------TEECTTCCCCCSSCCCEEECSSSEEEEETTEEEE
T ss_pred cccC----CCceEEEEEeCCCCeEEEEeCCCcEEEEEC--------CCCccceEEcCCcCccceecceEEEEecCCEEEE
Confidence 4332 346779999999999999999999999963 34566778899999998 68889999999999
Q ss_pred EEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEe------cCCceEEEEECC---------------CC-----cc
Q psy9770 685 YEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSN------SGDYELLYWNAG---------------TC-----RQ 738 (811)
Q Consensus 685 wd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~------s~Dg~i~iWd~~---------------~~-----~~ 738 (811)
||+.++ +.+..+..|.. .+.|+|||++|+++ +.+..+.+|.-. .+ ..
T Consensus 456 ~d~~~~----~~~~~~~~~~~---~v~~s~dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (814)
T 3mkq_A 456 FDWDNG----TLVRRIDVNAK---DVIWSDNGELVMIVNTNSNGDEASGYTLLFNKDAYLEAANNGNIDDSEGVDEAFDV 528 (814)
T ss_dssp ECTTTC----CEEEEESSCEE---EEEECTTSSEEEEEECCCSSCSCSEEEEEECHHHHHHHHHHTCCBTTTBCTTTEEE
T ss_pred EECCcC----cEEEEEecCCC---EEEEcCCCCEEEEEEcCcccCCceEEEEEechHHhhhhhhccCCccccchhhheee
Confidence 999886 45666776654 89999999999999 666666665421 00 00
Q ss_pred cCC-CCCccceeEeccceeecc--ceeeeCCCC------CCCCccceEEecCCCCEEEEEcCCCcEEEEeCCC
Q psy9770 739 IPQ-SSQLRDVVWESNSCTLTF--TTIGIWPEG------ADGTDVNSCERSHDARVIATGDDFGKLKLYSYPA 802 (811)
Q Consensus 739 ~~~-~~~~~~~~~~~~~~~~~~--~~~~i~~~~------~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~ 802 (811)
+.. ....+...|...-.+... .....+..+ .....+..+.|.+++..|+..+.++.+++|+++.
T Consensus 529 ~~~~~~~i~s~~w~~~~~i~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~l~~ 601 (814)
T 3mkq_A 529 LYELSESITSGKWVGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEISL 601 (814)
T ss_dssp EEEECSCCSEEEEETTEEEEECTTSEEEEEETTEEEEEEECSSCCEEEEEEGGGTEEEEECTTCCEEEEECCH
T ss_pred eeEeccEEEeeEEeCCEEEEEcCCCeEEEEeCCeeEEEEECCccEEEEEEEecCCEEEEEcCCCCEEEEEECc
Confidence 000 111223344322111111 000000000 1234566677888999999999999999999764
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.3e-40 Score=355.96 Aligned_cols=291 Identities=17% Similarity=0.310 Sum_probs=259.5
Q ss_pred ceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEE
Q psy9770 291 TQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCA 370 (811)
Q Consensus 291 ~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Las 370 (811)
..+.+.+|...|.+++|+||+++||+|+.|| .|+|||+.+++.+..+. .|...|.+++|+| +|++|++
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg--------~v~iWd~~~~~~~~~~~--~~~~~v~~~~~s~--~~~~l~s 114 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDG--------KLIIWDSYTTNKVHAIP--LRSSWVMTCAYAP--SGNYVAC 114 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTT--------EEEEEETTTCCEEEEEE--CSSSCEEEEEECT--TSSEEEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCC--------cEEEEECCCCCcceEee--cCCccEEEEEECC--CCCEEEE
Confidence 4567899999999999999999999999999 99999999999999987 8999999999999 8999998
Q ss_pred EeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCc
Q psy9770 371 VDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPK 450 (811)
Q Consensus 371 v~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~ 450 (811)
++.|+.|++|++.+.... . ..... +.+|..
T Consensus 115 --~~~d~~v~iw~~~~~~~~---~--------------------------------------~~~~~-------~~~h~~ 144 (340)
T 1got_B 115 --GGLDNICSIYNLKTREGN---V--------------------------------------RVSRE-------LAGHTG 144 (340)
T ss_dssp --EETTCEEEEEETTTCSBS---C--------------------------------------EEEEE-------EECCSS
T ss_pred --EeCCCeEEEEECccCCCc---c--------------------------------------eeEEE-------ecCCCc
Confidence 789999999999865410 0 00000 134566
Q ss_pred eEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceee
Q psy9770 451 YVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ 530 (811)
Q Consensus 451 ~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~ 530 (811)
.|.++.|++++.+++++.||.|++||+.+++....+. +|.+.|.+++|+|++++|++|+.|+.|++||+.....
T Consensus 145 ~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~----- 218 (340)
T 1got_B 145 YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC----- 218 (340)
T ss_dssp CEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE-----
T ss_pred cEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCee-----
Confidence 7899999999999999999999999999999999888 8999999999999999999999999999999876543
Q ss_pred eccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEE
Q psy9770 531 IAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVV 610 (811)
Q Consensus 531 ~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~ 610 (811)
...+.+|...|.+++|+|++++|++++.|++|++||+.+++.+
T Consensus 219 -------------------------------------~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 219 -------------------------------------RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp -------------------------------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred -------------------------------------EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 1234578889999999999999999999999999999999887
Q ss_pred EEecCC---CCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEE
Q psy9770 611 WSKDIA---EQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYE 686 (811)
Q Consensus 611 ~~~~~~---~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd 686 (811)
..+.+. ..|.+++|+|+|++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|||.+||+|+.|+.|+|||
T Consensus 262 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 262 MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 776554 4799999999999999999999999999999999999999999999999999999999999999999996
No 14
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.4e-41 Score=356.90 Aligned_cols=284 Identities=21% Similarity=0.319 Sum_probs=251.5
Q ss_pred CCCCceEEEEEEcCC----Cc-EEEEcCCCcEEEEecCCceE--EEEeecccccceEEEEEecCCcEEEEecCCCcEEEE
Q psy9770 446 RDKPKYVTCLAFTQG----GE-VLSGDSNGNIIVWTRGSNTI--SKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQF 518 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~----g~-llsg~~dg~I~vwd~~~~~~--~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~w 518 (811)
.+|...|.+++|+++ +. +++|+.||.|++|++..++. ...+. +|...|.+++|++++.++++++.|+.|++|
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~-gh~~~v~~~~~~~~~~~l~s~s~D~~i~lW 107 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLE-GHQLGVVSVDISHTLPIAASSSLDAHIRLW 107 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeec-cCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 678899999999985 33 67999999999999987654 33455 899999999999999999999999999999
Q ss_pred eCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCe
Q psy9770 519 DSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRI 598 (811)
Q Consensus 519 d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~ 598 (811)
|+..++. ...+..|...+.+++|+|++++|++++.|+.
T Consensus 108 d~~~~~~------------------------------------------~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~ 145 (321)
T 3ow8_A 108 DLENGKQ------------------------------------------IKSIDAGPVDAWTLAFSPDSQYLATGTHVGK 145 (321)
T ss_dssp ETTTTEE------------------------------------------EEEEECCTTCCCCEEECTTSSEEEEECTTSE
T ss_pred ECCCCCE------------------------------------------EEEEeCCCccEEEEEECCCCCEEEEEcCCCc
Confidence 9976544 1123356667888999999999999999999
Q ss_pred EEEEeCCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEe
Q psy9770 599 VQLWDSMSHSVVWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGS 677 (811)
Q Consensus 599 v~iwd~~~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs 677 (811)
|++||+.+++....+ .+...+.+++|+|+|++|++|+.||.|++||+.+++.+..+.+|..+|.+++|+|++++|++|+
T Consensus 146 v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s 225 (321)
T 3ow8_A 146 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS 225 (321)
T ss_dssp EEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC
T ss_pred EEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc
Confidence 999999999887764 5567899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceee
Q psy9770 678 RDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTL 757 (811)
Q Consensus 678 ~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (811)
.|+.|+|||+..+ ..+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++++..+.
T Consensus 226 ~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-------------- 287 (321)
T 3ow8_A 226 DDGYIKIYDVQHA----NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF-------------- 287 (321)
T ss_dssp TTSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--------------
T ss_pred CCCeEEEEECCCc----ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc--------------
Confidence 9999999999876 4567789999999999999999999999999999999999887665432
Q ss_pred ccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCC
Q psy9770 758 TFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYP 801 (811)
Q Consensus 758 ~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~ 801 (811)
.|...|.+++|+|++++|++++.||+|+|||+|
T Consensus 288 -----------~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 288 -----------DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp -----------CCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred -----------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 367789999999999999999999999999986
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.5e-41 Score=369.91 Aligned_cols=283 Identities=19% Similarity=0.264 Sum_probs=258.0
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCC
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQP 524 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~ 524 (811)
.+|...|++++|+|++. +++|+.||.|++||+.+++....+. +|...|.+++|++++++|++|+.|++|++||+....
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~-~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE 183 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC-CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 67889999999999998 5699999999999999999999988 999999999999999999999999999999987544
Q ss_pred ccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeC
Q psy9770 525 TGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDS 604 (811)
Q Consensus 525 ~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~ 604 (811)
. ...+.+|...|.+++|+|++.+|++++.|++|++||+
T Consensus 184 ~------------------------------------------~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 184 C------------------------------------------IRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp E------------------------------------------EECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred e------------------------------------------eEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 3 1234578899999999999999999999999999999
Q ss_pred CCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccC--------------
Q psy9770 605 MSHSVVWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPD-------------- 669 (811)
Q Consensus 605 ~~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spd-------------- 669 (811)
.++.++..+ .+...+.++.|+|+|.+|++|+.||.|++||+.+++....+.+|...|.+++|+|+
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~ 301 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSET 301 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccc
Confidence 999888774 67788999999999999999999999999999999999999999999999999996
Q ss_pred ------CCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCC
Q psy9770 670 ------GKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSS 743 (811)
Q Consensus 670 ------g~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~ 743 (811)
|.+|++|+.|+.|++||+.++ .++..+.+|...|++++|+|++++|++++.||.|++||+.+++++..+
T Consensus 302 ~~~~~~g~~l~sgs~D~~i~iwd~~~~----~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~- 376 (410)
T 1vyh_C 302 KKSGKPGPFLLSGSRDKTIKMWDVSTG----MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL- 376 (410)
T ss_dssp ------CCEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE-
T ss_pred cccCCCCCEEEEEeCCCeEEEEECCCC----ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE-
Confidence 679999999999999999886 567788999999999999999999999999999999999887765432
Q ss_pred CccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeC
Q psy9770 744 QLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSY 800 (811)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~ 800 (811)
..|...|++++|+|++.+||+|+.||+|+||++
T Consensus 377 ------------------------~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 377 ------------------------NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp ------------------------ECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred ------------------------cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 246778999999999999999999999999986
No 16
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-40 Score=364.04 Aligned_cols=348 Identities=12% Similarity=0.160 Sum_probs=285.6
Q ss_pred EEEEEeCCCCceE-EeccCCCCeEEEEEcCCCc-EEEEeeccCCCCCCCCCeEEEEeC----CCCc------EEEEecc-
Q psy9770 281 VAVLYNVEEQTQR-HYLGHTDDIKCLSIHPNKL-LIATGQVAGHDAREGKPHIRIWNS----VSLF------TVSIIGI- 347 (811)
Q Consensus 281 ~i~i~d~~~~~~~-~~~~h~~~V~~la~spdg~-~Lasg~~dg~~~~~~~~~I~iWd~----~t~~------~~~~l~~- 347 (811)
.+.+|+.+..... ....|...|.+++|+|+++ +||+|+.+| .|+|||+ .+++ ....+..
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 97 (425)
T 1r5m_A 26 IDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNS--------VARLARIVETDQEGKKYWKLTIIAELRHP 97 (425)
T ss_dssp --------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBT--------EEEEEEEEEC------CEEEEEEEEEECC
T ss_pred ccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCc--------eEEEEEEecccCCcccccccccccccccc
Confidence 3457777655432 2345679999999999999 999999999 9999999 8888 4555541
Q ss_pred -C------CccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC
Q psy9770 348 -G------EFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG 420 (811)
Q Consensus 348 -~------~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~ 420 (811)
. +|...|.+++|+| +|++|++ ++.|+.|++|| .+++ .+..+..|...|.+++|+|++..+++++.
T Consensus 98 ~~~~~~~~~~~~~v~~~~~s~--~~~~l~~--~~~dg~i~i~~-~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (425)
T 1r5m_A 98 FALSASSGKTTNQVTCLAWSH--DGNSIVT--GVENGELRLWN-KTGA---LLNVLNFHRAPIVSVKWNKDGTHIISMDV 169 (425)
T ss_dssp CCCC------CBCEEEEEECT--TSSEEEE--EETTSCEEEEE-TTSC---EEEEECCCCSCEEEEEECTTSSEEEEEET
T ss_pred ccccccccCCCCceEEEEEcC--CCCEEEE--EeCCCeEEEEe-CCCC---eeeeccCCCccEEEEEECCCCCEEEEEec
Confidence 1 1688999999999 8999998 78899999999 5556 78899999999999999998888888888
Q ss_pred CCcEEEEEEcCCceeeeecccccc--------cCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeeccccc
Q psy9770 421 KSHINFWTIDAGGTLYKKQGIFEM--------IRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEG 492 (811)
Q Consensus 421 d~~i~iwd~~~~~~~~~~~~~~~~--------l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~ 492 (811)
++.|++|++.++..+......... .......+.+++|++++.+++++.+|.|++||+.+++....+. .|..
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~-~~~~ 248 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLI-GHHG 248 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEEC-CCSS
T ss_pred CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeec-cCCC
Confidence 999999999877665544221110 0001112889999999999999999999999999998888887 8999
Q ss_pred ceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeee
Q psy9770 493 SVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL 572 (811)
Q Consensus 493 ~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~ 572 (811)
.|.+++|+|++++|++++.||.|++||+..... ...+.
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------------------------------------------~~~~~ 286 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS------------------------------------------QNCFY 286 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEECSSSBSC------------------------------------------SEEEC
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc------------------------------------------ceEec
Confidence 999999999999999999999999999876544 12234
Q ss_pred ecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcc--
Q psy9770 573 GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETRE-- 649 (811)
Q Consensus 573 ~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~-- 649 (811)
+|...|.+++|+|++ ++++++.|+.|++||+.+++.+..+ .+...+.+++|+|++++|++++.||.|++||+.+++
T Consensus 287 ~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~ 365 (425)
T 1r5m_A 287 GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSK 365 (425)
T ss_dssp CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC-
T ss_pred CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccc
Confidence 678889999999999 9999999999999999999888775 467899999999999999999999999999999888
Q ss_pred ------------------eeEEecCCCC--CeEEEEEccCCCEEEEEecCCcEEEEEec
Q psy9770 650 ------------------AYSIHTDGNE--PIQVVKFSPDGKLLALGSRDNYIYVYEVS 688 (811)
Q Consensus 650 ------------------~~~~~~~~~~--~i~~i~~spdg~~lasgs~dg~I~iwd~~ 688 (811)
.+..+..|.. .|++++|+|++++|++++.||.|++|++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 366 SRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp -------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred eeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 8889998876 99999999999999999999999999985
No 17
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.6e-40 Score=362.44 Aligned_cols=307 Identities=17% Similarity=0.275 Sum_probs=253.1
Q ss_pred eEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEE
Q psy9770 292 QRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAV 371 (811)
Q Consensus 292 ~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv 371 (811)
...+.+|...|++++|+|++.+||+|+.|| .|+|||+.+++.+..+. +|...|.+++|+| +|++|++
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg--------~i~vwd~~~~~~~~~l~--~h~~~V~~v~~~~--~~~~l~s- 167 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDA--------TIKVWDYETGDFERTLK--GHTDSVQDISFDH--SGKLLAS- 167 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSS--------CEEEEETTTCCCCEEEC--CCSSCEEEEEECT--TSSEEEE-
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCC--------eEEEEECCCCcEEEEEe--ccCCcEEEEEEcC--CCCEEEE-
Confidence 456789999999999999999999999999 99999999999999987 9999999999999 8999998
Q ss_pred eCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCce
Q psy9770 372 DEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKY 451 (811)
Q Consensus 372 ~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~ 451 (811)
++.|++|+|||+.+++ ++..+.+|...|.+++|+|++..+++++.|+.|++||+.++..+... .+|...
T Consensus 168 -gs~D~~i~iwd~~~~~---~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~-------~~h~~~ 236 (410)
T 1vyh_C 168 -CSADMTIKLWDFQGFE---CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-------TGHREW 236 (410)
T ss_dssp -EETTSCCCEEETTSSC---EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-------ECCSSC
T ss_pred -EeCCCeEEEEeCCCCc---eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE-------eCCCcc
Confidence 7999999999999988 89999999999999999998888888888999999999987766554 557788
Q ss_pred EEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceee
Q psy9770 452 VTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ 530 (811)
Q Consensus 452 v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~ 530 (811)
|.++.|++++. +++|+.||.|++||+.+++....+. .|...|.+++|+|++.+.......+.
T Consensus 237 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~---------------- 299 (410)
T 1vyh_C 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EHRHVVECISWAPESSYSSISEATGS---------------- 299 (410)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECCSCGGGGGGGCCSC----------------
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec-CCCceEEEEEEcCcccccchhhhccc----------------
Confidence 99999999999 5599999999999999999988888 89999999999997432110000000
Q ss_pred eccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCC-ceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcE
Q psy9770 531 IAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLG-FSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSV 609 (811)
Q Consensus 531 ~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~-~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~ 609 (811)
.......++..+++++.++.|++||+.++ ....+.+|...|.+++|+|++++|++++.|+.|++||+.++++
T Consensus 300 -------~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 300 -------ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp -------C-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC
T ss_pred -------cccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce
Confidence 00000011233444444444444444433 2345668999999999999999999999999999999999887
Q ss_pred EEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecC
Q psy9770 610 VWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSE 646 (811)
Q Consensus 610 ~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~ 646 (811)
+..+ .|...|.+++|+|++.+|++|+.||.|++|+++
T Consensus 373 ~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 7774 678899999999999999999999999999863
No 18
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=343.31 Aligned_cols=291 Identities=13% Similarity=0.187 Sum_probs=254.8
Q ss_pred eEEEeeeCCCcEEEEEecCC----CCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEE
Q psy9770 392 KITETKCSVDTVVAAEFHPL----DRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSG 466 (811)
Q Consensus 392 ~~~~~~~~~~~V~~v~fsp~----~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg 466 (811)
.+....+|.+.|.+++|+|+ +..+++++.|+.|++|++..+...... .+.+|...|.+++|++++. ++++
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~-----~l~gh~~~v~~~~~~~~~~~l~s~ 98 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQW-----SLEGHQLGVVSVDISHTLPIAASS 98 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEE-----EECCCSSCEEEEEECSSSSEEEEE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeee-----eeccCCCCEEEEEECCCCCEEEEE
Confidence 34566789999999999985 234555666999999999855332211 1267889999999999998 5599
Q ss_pred cCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCC
Q psy9770 467 DSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRG 546 (811)
Q Consensus 467 ~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~ 546 (811)
+.||.|++||+.+++.+..+. .|...+.+++|+|++++|++++.||.|++|++.....
T Consensus 99 s~D~~i~lWd~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~--------------------- 156 (321)
T 3ow8_A 99 SLDAHIRLWDLENGKQIKSID-AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK--------------------- 156 (321)
T ss_dssp ETTSEEEEEETTTTEEEEEEE-CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE---------------------
T ss_pred eCCCcEEEEECCCCCEEEEEe-CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce---------------------
Confidence 999999999999999998888 8889999999999999999999999999999976544
Q ss_pred CeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe-cCCCCeEEEEEc
Q psy9770 547 SQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK-DIAEQAQSATFS 625 (811)
Q Consensus 547 ~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~-~~~~~v~~~~~s 625 (811)
...+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+ .+...|.+++|+
T Consensus 157 ---------------------~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s 215 (321)
T 3ow8_A 157 ---------------------EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 215 (321)
T ss_dssp ---------------------EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEEC
T ss_pred ---------------------eEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEc
Confidence 1123456678999999999999999999999999999999988775 467899999999
Q ss_pred CCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCC
Q psy9770 626 PDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSS 705 (811)
Q Consensus 626 pdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~ 705 (811)
|++++|++|+.||.|++||+.+++....+.+|...|.+++|+|++++|++++.|+.|+|||+.++ +++..+.+|..
T Consensus 216 pd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~----~~~~~~~~h~~ 291 (321)
T 3ow8_A 216 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR----TCVHTFFDHQD 291 (321)
T ss_dssp TTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCCSS
T ss_pred CCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC----EEEEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999886 67778899999
Q ss_pred CeeEEEeCCCCCeEEEecCCceEEEEECC
Q psy9770 706 FITHLDWSEDSMYIRSNSGDYELLYWNAG 734 (811)
Q Consensus 706 ~V~~l~~spdg~~L~s~s~Dg~i~iWd~~ 734 (811)
.|.+++|+|++++|++++.||.|++||..
T Consensus 292 ~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 292 QVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999999963
No 19
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-39 Score=357.06 Aligned_cols=351 Identities=17% Similarity=0.210 Sum_probs=286.1
Q ss_pred CceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCC-CeEEEECCCcEEEEEE----cCCce------eeeecccccc
Q psy9770 376 DYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDR-NNIVTCGKSHINFWTI----DAGGT------LYKKQGIFEM 444 (811)
Q Consensus 376 d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~-~ll~~~~d~~i~iwd~----~~~~~------~~~~~~~~~~ 444 (811)
...+.+|+++... .......|.+.|.+++|+|++. .+++++.|+.|++|++ .++.. .......+..
T Consensus 24 ~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (425)
T 1r5m_A 24 NSIDSSDDLDGFV---KILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFAL 100 (425)
T ss_dssp ----------CCC---EECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCC
T ss_pred ccccccccchhhh---hheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccc
Confidence 3456788988766 5666667779999999999988 6777777999999999 76662 3322222211
Q ss_pred ---cCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeC
Q psy9770 445 ---IRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDS 520 (811)
Q Consensus 445 ---l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~ 520 (811)
..+|...|.+++|+|++. +++++.||.|++|| .+++....+. .|...|.+++|+|++++|++++.||.|++||+
T Consensus 101 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 101 SASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVENVTILWNV 178 (425)
T ss_dssp C------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred cccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeecc-CCCccEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence 123567899999999998 56999999999999 5677777777 89999999999999999999999999999999
Q ss_pred CCCCccceeeeccccCC---------------eEEEeeCCCCeEEEEeCCCeEEEEEccCC-ceeeeeecccceEEEEEC
Q psy9770 521 NLQPTGYEAQIAEHLGG---------------IRTVSEGRGSQLIVGTTRNCILVGSLNLG-FSPVVLGHTDELWALAAH 584 (811)
Q Consensus 521 ~~~~~~~~~~~~~~~~~---------------v~~l~~~~~~~l~~~~~~~~i~~~d~~~~-~~~~~~~h~~~v~~l~~s 584 (811)
..... ...+..+... +.++.+.+++.+++++.++.|++||+... ....+..|...|.+++|+
T Consensus 179 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 179 ISGTV--MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN 256 (425)
T ss_dssp TTTEE--EEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE
T ss_pred CCCcE--EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC
Confidence 87665 3344444444 88888999999999999999999999876 445667899999999999
Q ss_pred CCCCeEEEEECCCeEEEEeCCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEE
Q psy9770 585 PSLSQFLTAGFDRIVQLWDSMSHSVVWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQV 663 (811)
Q Consensus 585 p~~~~l~s~s~dg~v~iwd~~~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~ 663 (811)
|++++|++++.|+.|++||+.+++.+..+ .+...+.+++|+|++ ++++++.||.|++||+.+++.+..+..|...|.+
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 335 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFA 335 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEE
Confidence 99999999999999999999998877775 478899999999999 9999999999999999999999999999999999
Q ss_pred EEEccCCCEEEEEecCCcEEEEEecCCCc----------------ceeEEEEecCCCC--CeeEEEeCCCCCeEEEecCC
Q psy9770 664 VKFSPDGKLLALGSRDNYIYVYEVSGDSR----------------KYSRVGRCTGHSS--FITHLDWSEDSMYIRSNSGD 725 (811)
Q Consensus 664 i~~spdg~~lasgs~dg~I~iwd~~~~~~----------------~~~~~~~~~~h~~--~V~~l~~spdg~~L~s~s~D 725 (811)
++|+|++++|++++.||.|++|++.++.. ....+..+.+|.. .|++++|+|++++|++++.|
T Consensus 336 ~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 415 (425)
T 1r5m_A 336 GRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL 415 (425)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS
T ss_pred EEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC
Confidence 99999999999999999999999987530 1116777888976 99999999999999999999
Q ss_pred ceEEEEECC
Q psy9770 726 YELLYWNAG 734 (811)
Q Consensus 726 g~i~iWd~~ 734 (811)
|.|++|+++
T Consensus 416 g~i~iw~~~ 424 (425)
T 1r5m_A 416 QEGSVVAIP 424 (425)
T ss_dssp SCCEEEECC
T ss_pred ceEEEEeec
Confidence 999999986
No 20
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1e-38 Score=344.99 Aligned_cols=293 Identities=19% Similarity=0.282 Sum_probs=255.6
Q ss_pred ceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEE
Q psy9770 291 TQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCA 370 (811)
Q Consensus 291 ~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Las 370 (811)
..+.+.+|...|.|++|+||+++||+|+.|| .|+|||..+++..+.+. .|...|.+++|+| +|.+|++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg--------~v~vWd~~~~~~~~~~~--~~~~~v~~~~~sp--~g~~las 123 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDG--------KVIVWDSFTTNKEHAVT--MPCTWVMACAYAP--SGCAIAC 123 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCEEEEEE--CSSSCCCEEEECT--TSSEEEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCC--------eEEEEECCCCCcceEEe--cCCCCEEEEEECC--CCCEEEE
Confidence 4567889999999999999999999999999 99999999999999887 7889999999999 8999998
Q ss_pred EeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCc
Q psy9770 371 VDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPK 450 (811)
Q Consensus 371 v~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~ 450 (811)
++.|+.+++|++........ ..... .+..|..
T Consensus 124 --g~~d~~i~v~~~~~~~~~~~---------------------------------------~~~~~-------~~~~h~~ 155 (354)
T 2pbi_B 124 --GGLDNKCSVYPLTFDKNENM---------------------------------------AAKKK-------SVAMHTN 155 (354)
T ss_dssp --ESTTSEEEEEECCCCTTCCS---------------------------------------GGGCE-------EEEECSS
T ss_pred --eeCCCCEEEEEEeccccccc---------------------------------------cccce-------eeeccCC
Confidence 79999999999875430000 00000 0133566
Q ss_pred eEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEec--CCcEEEEecCCCcEEEEeCCCCCccc
Q psy9770 451 YVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLK--EGSIISAGGKDGRLLQFDSNLQPTGY 527 (811)
Q Consensus 451 ~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~--dg~~l~s~s~dg~I~~wd~~~~~~~~ 527 (811)
.|.+++|+|++. +++++.||+|++||+++++.+..+. +|...|.+++|++ ++++|++|+.||.|++||+..+..
T Consensus 156 ~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~-- 232 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC-- 232 (354)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE--
T ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE--
Confidence 789999999987 7799999999999999999999998 8999999999987 578999999999999999986554
Q ss_pred eeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCC
Q psy9770 528 EAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH 607 (811)
Q Consensus 528 ~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~ 607 (811)
...+.+|...|.+++|+|++.+|++++.|++|++||+..+
T Consensus 233 ----------------------------------------~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 233 ----------------------------------------VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp ----------------------------------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred ----------------------------------------EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 1234568889999999999999999999999999999998
Q ss_pred cEEEEecC---CCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEE
Q psy9770 608 SVVWSKDI---AEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYV 684 (811)
Q Consensus 608 ~~~~~~~~---~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~i 684 (811)
+.+..+.. ...+.+++|+|+|.+|++|+.|+.|++||+.+++.+..+.+|...|++++|+|||++|++|+.|+.|+|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~v 352 (354)
T 2pbi_B 273 REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRV 352 (354)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEe
Confidence 77766543 347899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EE
Q psy9770 685 YE 686 (811)
Q Consensus 685 wd 686 (811)
|+
T Consensus 353 W~ 354 (354)
T 2pbi_B 353 WA 354 (354)
T ss_dssp EC
T ss_pred cC
Confidence 95
No 21
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1e-38 Score=343.15 Aligned_cols=283 Identities=19% Similarity=0.305 Sum_probs=256.8
Q ss_pred cCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCC
Q psy9770 445 IRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQ 523 (811)
Q Consensus 445 l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~ 523 (811)
+.+|...|.+++|+|+++ +++|+.||.|++||..+++....+. .|...|.+++|+|++++|++|+.|+.|++|++...
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~ 129 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP-LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTC
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee-cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccC
Confidence 367889999999999998 5699999999999999999988888 89999999999999999999999999999999765
Q ss_pred Cc--cceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCC-ceeeeeecccceEEEEECCCCCeEEEEECCCeEE
Q psy9770 524 PT--GYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLG-FSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQ 600 (811)
Q Consensus 524 ~~--~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~-~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~ 600 (811)
.. .....+.+|.+.+.++.+.+++.+++++.++.|++||+.++ ....+.+|.+.|.+++|+|++.+|++++.|+.|+
T Consensus 130 ~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~ 209 (340)
T 1got_B 130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209 (340)
T ss_dssp SBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 32 23456778999999999999999999999999999999876 4556778999999999999999999999999999
Q ss_pred EEeCCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecC--CCCCeEEEEEccCCCEEEEEe
Q psy9770 601 LWDSMSHSVVWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTD--GNEPIQVVKFSPDGKLLALGS 677 (811)
Q Consensus 601 iwd~~~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~i~~spdg~~lasgs 677 (811)
+||+.++..+..+ .|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.. +...|.+++|+|+|++|++|+
T Consensus 210 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 289 (340)
T 1got_B 210 LWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY 289 (340)
T ss_dssp EEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC
Confidence 9999999888775 5788999999999999999999999999999999887776653 335799999999999999999
Q ss_pred cCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEE
Q psy9770 678 RDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWN 732 (811)
Q Consensus 678 ~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd 732 (811)
.|+.|++||+.++ ..+..+.+|...|.+++|+||+.+|++++.|+.|++||
T Consensus 290 ~d~~i~vwd~~~~----~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 290 DDFNCNVWDALKA----DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTSEEEEEETTTC----CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCeEEEEEcccC----cEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999875 45667889999999999999999999999999999996
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.7e-39 Score=351.48 Aligned_cols=317 Identities=15% Similarity=0.156 Sum_probs=240.0
Q ss_pred EEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecC------CCcEEEEeCCCCCcc-
Q psy9770 454 CLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK------DGRLLQFDSNLQPTG- 526 (811)
Q Consensus 454 ~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~------dg~I~~wd~~~~~~~- 526 (811)
.+.+.+++.++.+..+.....|++..... . .|+..|.+++|+|||++|++++. |+.|++|+.......
T Consensus 10 g~d~g~~~~~~~~~g~~~~~~w~~p~~~p----~-~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~ 84 (357)
T 4g56_B 10 GVDLGTENLYFQSNGSSKGSAWGRPVTAP----A-CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE 84 (357)
T ss_dssp -----------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CG
T ss_pred CCCCCccceEEecCCCccccccCCCCCCc----c-cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcce
Confidence 34455555566666677889998764332 2 79999999999999999999987 788999998665431
Q ss_pred -ceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCce-----eeeeecccceEEEEECCCCCeEEEEECCCeEE
Q psy9770 527 -YEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFS-----PVVLGHTDELWALAAHPSLSQFLTAGFDRIVQ 600 (811)
Q Consensus 527 -~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~-----~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~ 600 (811)
......+|...|.+++|++++.+++++.++.|++||+.++.. ....+|...|.+++|+|++++|++++.|+.|+
T Consensus 85 ~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~ 164 (357)
T 4g56_B 85 SLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVK 164 (357)
T ss_dssp GGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred eEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 233445688889999999999999999999999999987522 23447999999999999999999999999999
Q ss_pred EEeCCCCcEEEEe-cCCCCeEEEEEcCCCC-EEEEEEeCCeEEEEecCCcceeEEec--CCCCCeEEEEEccC-CCEEEE
Q psy9770 601 LWDSMSHSVVWSK-DIAEQAQSATFSPDGS-IIIVGCIAGRWLVMDSETREAYSIHT--DGNEPIQVVKFSPD-GKLLAL 675 (811)
Q Consensus 601 iwd~~~~~~~~~~-~~~~~v~~~~~spdg~-~la~g~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~i~~spd-g~~las 675 (811)
+||+.+++.+..+ .+...|.+++|+|++. ++++++.||.|++||+.+++....+. .+...+.+++|+|+ +.+|++
T Consensus 165 iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 165 VWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEE
Confidence 9999999988875 5778999999999885 78899999999999999988766554 56778999999997 468999
Q ss_pred EecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCC-CeEEEecCCceEEEEECCCCcccCCCCCccceeEeccc
Q psy9770 676 GSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDS-MYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNS 754 (811)
Q Consensus 676 gs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg-~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~ 754 (811)
|+.|+.|++||+.++ +.+..+.+|...|++++|+|++ ++|++++.|++|+|||+++++.+..+
T Consensus 245 g~~d~~i~~wd~~~~----~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~------------ 308 (357)
T 4g56_B 245 GDETGNVSLVNIKNP----DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL------------ 308 (357)
T ss_dssp EESSSCEEEEESSCG----GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC------------
T ss_pred eecccceeEEECCCC----cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC------------
Confidence 999999999999886 3455678999999999999987 68999999999999999988755321
Q ss_pred eeeccceeeeCCCCCCCCccceEEecC-CCCEEEEEcCCCcEEEEeCCCCCC
Q psy9770 755 CTLTFTTIGIWPEGADGTDVNSCERSH-DARVIATGDDFGKLKLYSYPAVQP 805 (811)
Q Consensus 755 ~~~~~~~~~i~~~~~h~~~I~~l~~s~-dg~~Las~~~dg~v~vw~~~~~~~ 805 (811)
+|...|++|+|+| |+++||+++.||+|++|+++....
T Consensus 309 --------------~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 309 --------------SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp --------------CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred --------------CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 3678899999998 899999999999999999987543
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.5e-38 Score=343.65 Aligned_cols=289 Identities=19% Similarity=0.273 Sum_probs=252.4
Q ss_pred cCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCC
Q psy9770 445 IRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQ 523 (811)
Q Consensus 445 l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~ 523 (811)
+.+|...|.+++|+|++. +++|+.||.|++||..+++....+. .|...|.+++|+|+|.+|++++.|+.+++|++...
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~-~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~ 138 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT-MPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFD 138 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCC
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEe-cCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecc
Confidence 367889999999999998 6699999999999999998888887 89999999999999999999999999999998654
Q ss_pred CccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEe
Q psy9770 524 PTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWD 603 (811)
Q Consensus 524 ~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd 603 (811)
..... ......+.+|...|.+++|+|++..|++++.|++|++||
T Consensus 139 ~~~~~------------------------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd 182 (354)
T 2pbi_B 139 KNENM------------------------------------AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWD 182 (354)
T ss_dssp TTCCS------------------------------------GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccccc------------------------------------cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEe
Confidence 32000 001233557999999999999999999999999999999
Q ss_pred CCCCcEEEEe-cCCCCeEEEEEcC--CCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCC
Q psy9770 604 SMSHSVVWSK-DIAEQAQSATFSP--DGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDN 680 (811)
Q Consensus 604 ~~~~~~~~~~-~~~~~v~~~~~sp--dg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg 680 (811)
+.+++++..+ .|...|.+++|+| +|.+|++|+.||.|++||+.+++.+..+..|...|.+++|+|++.+|++|+.|+
T Consensus 183 ~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 262 (354)
T 2pbi_B 183 VESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDA 262 (354)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCC
Confidence 9999988775 5788999999987 578999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEecCCCcceeEEEEec--CCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeec
Q psy9770 681 YIYVYEVSGDSRKYSRVGRCT--GHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLT 758 (811)
Q Consensus 681 ~I~iwd~~~~~~~~~~~~~~~--~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (811)
.|++||+..+ ..+..+. .+...+.+++|+|++++|++++.|+.|++||+.+++.+..+
T Consensus 263 ~v~lwd~~~~----~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l---------------- 322 (354)
T 2pbi_B 263 TCRLYDLRAD----REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL---------------- 322 (354)
T ss_dssp CEEEEETTTT----EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE----------------
T ss_pred eEEEEECCCC----cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEE----------------
Confidence 9999999875 2333333 33457899999999999999999999999999887755322
Q ss_pred cceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEe
Q psy9770 759 FTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYS 799 (811)
Q Consensus 759 ~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~ 799 (811)
.+|...|++++|+|||++||+|+.||+|+||+
T Consensus 323 ---------~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 323 ---------FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ---------CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ---------ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 24788899999999999999999999999996
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-39 Score=351.81 Aligned_cols=321 Identities=17% Similarity=0.208 Sum_probs=234.7
Q ss_pred EEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC------CCcEEEEEE
Q psy9770 356 CLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG------KSHINFWTI 429 (811)
Q Consensus 356 ~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~------d~~i~iwd~ 429 (811)
.+.+.+ ++.++.+ ..+.....|++.... ..+|...|.+++|+|||..+++++. |+.|++|+.
T Consensus 10 g~d~g~--~~~~~~~---~g~~~~~~w~~p~~~-------p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~ 77 (357)
T 4g56_B 10 GVDLGT--ENLYFQS---NGSSKGSAWGRPVTA-------PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKD 77 (357)
T ss_dssp ------------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESS
T ss_pred CCCCCc--cceEEec---CCCccccccCCCCCC-------cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEEC
Confidence 344444 4444443 556778899875433 4579999999999998877777766 567888877
Q ss_pred cCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEE---eecccccceEEEEEecCCcEE
Q psy9770 430 DAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKF---IRNVHEGSVFSICVLKEGSII 506 (811)
Q Consensus 430 ~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~---~~~~h~~~V~~l~~s~dg~~l 506 (811)
.++...... .....+|...|.+++|+|++.+++++.||.|+|||+.+++.... ...+|...|.+++|+|++++|
T Consensus 78 ~~~~~~~~~---~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l 154 (357)
T 4g56_B 78 PEGAPNESL---CTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQA 154 (357)
T ss_dssp CC---CGGG---CSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEE
T ss_pred CCCCcceeE---ecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEE
Confidence 654332221 11124567789999999999999999999999999988765422 123799999999999999999
Q ss_pred EEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCC
Q psy9770 507 SAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPS 586 (811)
Q Consensus 507 ~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~ 586 (811)
++++.|+.|++||+.++.. ...+.+|...|.+++|+|+
T Consensus 155 ~sgs~dg~v~iwd~~~~~~------------------------------------------~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 155 VSGGKDFSVKVWDLSQKAV------------------------------------------LKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp EEEETTSCEEEEETTTTEE------------------------------------------EEEECCCSSCEEEEEECTT
T ss_pred EEEeCCCeEEEEECCCCcE------------------------------------------EEEEcCCCCCEEEEEEccC
Confidence 9999999999999886554 1234578889999999998
Q ss_pred CC-eEEEEECCCeEEEEeCCCCcEEEEe---cCCCCeEEEEEcCC-CCEEEEEEeCCeEEEEecCCcceeEEecCCCCCe
Q psy9770 587 LS-QFLTAGFDRIVQLWDSMSHSVVWSK---DIAEQAQSATFSPD-GSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPI 661 (811)
Q Consensus 587 ~~-~l~s~s~dg~v~iwd~~~~~~~~~~---~~~~~v~~~~~spd-g~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i 661 (811)
+. ++++++.|+.|++||+.+++..... .+...+.+++|+|+ +.+|++|+.|+.|++||+.+++.+..+.+|...|
T Consensus 193 ~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v 272 (357)
T 4g56_B 193 KDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNI 272 (357)
T ss_dssp CSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCE
T ss_pred CCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeE
Confidence 75 7899999999999999998876553 34567999999997 5688999999999999999999999999999999
Q ss_pred EEEEEccCC-CEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCC-CCCeEEEecCCceEEEEECCCCcc
Q psy9770 662 QVVKFSPDG-KLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSE-DSMYIRSNSGDYELLYWNAGTCRQ 738 (811)
Q Consensus 662 ~~i~~spdg-~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~L~s~s~Dg~i~iWd~~~~~~ 738 (811)
++++|+|++ ++||+|+.|++|+|||+.++ +.+ ...+|.+.|++|+|+| |+++|++++.||+|++|++.+...
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~~~----~~~-~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDADFS----EVF-RDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTSC----EEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECCCC----cEe-EECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 999999987 68999999999999999875 333 3458999999999998 899999999999999999976433
No 25
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-39 Score=360.48 Aligned_cols=359 Identities=12% Similarity=0.166 Sum_probs=280.0
Q ss_pred cEEEEEecCCCCCeEEEE-----------CCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCC
Q psy9770 402 TVVAAEFHPLDRNNIVTC-----------GKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSN 469 (811)
Q Consensus 402 ~V~~v~fsp~~~~ll~~~-----------~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~d 469 (811)
.|.+++|+|++..+++++ .|+.|++|++.++..... ... ..|...|.+++|+|++. +++++.|
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~----~~~-~~~~~~v~~~~~s~~~~~l~~~~~d 88 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP----IAS-LQVDSKFNDLDWSHNNKIIAGALDN 88 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC----SCC-CCCSSCEEEEEECSSSSCEEEEESS
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcE----EEE-EecCCceEEEEECCCCCeEEEEccC
Confidence 567899999887666665 578999999986543211 111 44678899999999998 6689999
Q ss_pred CcEEEEecCC----ceEEEEeecccccceEEEEEecC-CcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeC
Q psy9770 470 GNIIVWTRGS----NTISKFIRNVHEGSVFSICVLKE-GSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEG 544 (811)
Q Consensus 470 g~I~vwd~~~----~~~~~~~~~~h~~~V~~l~~s~d-g~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~ 544 (811)
|.|++||+.. .+....+. .|...|.+++|+|+ +++|++++.||.|++||+........ ... .
T Consensus 89 g~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~-----~------ 155 (416)
T 2pm9_A 89 GSLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPS-NYT-----P------ 155 (416)
T ss_dssp SCEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTT-TCC-----C------
T ss_pred CeEEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccc-ccc-----c------
Confidence 9999999987 34667776 89999999999998 89999999999999999987652000 000 0
Q ss_pred CCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCC-CCeEEEEECCCeEEEEeCCCCcEEEEecC-------C
Q psy9770 545 RGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPS-LSQFLTAGFDRIVQLWDSMSHSVVWSKDI-------A 616 (811)
Q Consensus 545 ~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~-~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-------~ 616 (811)
........|...|.+++|+|+ +.+|++++.|+.|++||+.+++.+..+.. .
T Consensus 156 ---------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 214 (416)
T 2pm9_A 156 ---------------------LTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIK 214 (416)
T ss_dssp ---------------------BCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCC
T ss_pred ---------------------cccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccC
Confidence 000123468889999999999 78999999999999999999988877654 6
Q ss_pred CCeEEEEEcCCC-CEEEEEEeCC---eEEEEecCCc-ceeEEec-CCCCCeEEEEEcc-CCCEEEEEecCCcEEEEEecC
Q psy9770 617 EQAQSATFSPDG-SIIIVGCIAG---RWLVMDSETR-EAYSIHT-DGNEPIQVVKFSP-DGKLLALGSRDNYIYVYEVSG 689 (811)
Q Consensus 617 ~~v~~~~~spdg-~~la~g~~dg---~i~i~d~~~~-~~~~~~~-~~~~~i~~i~~sp-dg~~lasgs~dg~I~iwd~~~ 689 (811)
..+.+++|+|++ .+|++++.++ .|++||+.++ ..+..+. +|...|.+++|+| ++++|++++.|+.|++||+.+
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 789999999997 6899999998 9999999986 6777777 8999999999999 999999999999999999988
Q ss_pred CCcceeEEEEecCCCCCeeEEEeCCCC-CeEEEecCCceEEEEECCCCcccCCCCCcc-------ceeEeccceeec---
Q psy9770 690 DSRKYSRVGRCTGHSSFITHLDWSEDS-MYIRSNSGDYELLYWNAGTCRQIPQSSQLR-------DVVWESNSCTLT--- 758 (811)
Q Consensus 690 ~~~~~~~~~~~~~h~~~V~~l~~spdg-~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~-------~~~~~~~~~~~~--- 758 (811)
+ +.+..+.+|...|++++|+|++ .+|++++.|+.|++||+.+++......... ..-|........
T Consensus 295 ~----~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (416)
T 2pm9_A 295 A----EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEK 370 (416)
T ss_dssp C----CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSC
T ss_pred C----ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccc
Confidence 6 5667788999999999999999 899999999999999999877554332100 000100000000
Q ss_pred cceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy9770 759 FTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAV 803 (811)
Q Consensus 759 ~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~ 803 (811)
.....+-....|...+++++|+|||++|++++.||.|+||++.+.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 371 PSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred cccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 000000011226778899999999999999999999999999875
No 26
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.5e-39 Score=352.38 Aligned_cols=299 Identities=18% Similarity=0.272 Sum_probs=255.3
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCC
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQP 524 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~ 524 (811)
.+|...|.+++|+|++. +++|+.||+|++||..+++....+. .|...|.+++|+|+|++|++|+.|+.|++||+....
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~-~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIK-LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE-CCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCS
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEe-cCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCc
Confidence 67889999999999998 6799999999999999999999888 899999999999999999999999999999987543
Q ss_pred ccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCC-CeEEEEECCCeEEEEe
Q psy9770 525 TGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSL-SQFLTAGFDRIVQLWD 603 (811)
Q Consensus 525 ~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~-~~l~s~s~dg~v~iwd 603 (811)
. ... .......+.+|.+.|.++.|.|++ ..|++++.|++|++||
T Consensus 142 ~-~~~----------------------------------~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd 186 (380)
T 3iz6_a 142 D-RDG----------------------------------NMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWD 186 (380)
T ss_dssp S-CCC----------------------------------SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEEC
T ss_pred c-ccC----------------------------------CccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEE
Confidence 2 000 001223456899999999999974 5799999999999999
Q ss_pred CCCCcEEEEe------cCCCCeEEEEEcC-CCCEEEEEEeCCeEEEEecC-CcceeEEecCCCCCeEEEEEccCCCEEEE
Q psy9770 604 SMSHSVVWSK------DIAEQAQSATFSP-DGSIIIVGCIAGRWLVMDSE-TREAYSIHTDGNEPIQVVKFSPDGKLLAL 675 (811)
Q Consensus 604 ~~~~~~~~~~------~~~~~v~~~~~sp-dg~~la~g~~dg~i~i~d~~-~~~~~~~~~~~~~~i~~i~~spdg~~las 675 (811)
+.+++.+..+ .|...+.+++|++ ++.+|++|+.||.|++||+. ..+.+..+.+|...|.+++|+|+|++|++
T Consensus 187 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 266 (380)
T 3iz6_a 187 VTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGT 266 (380)
T ss_dssp TTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEE
T ss_pred cCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEE
Confidence 9999887665 3567899999987 88999999999999999998 55788889999999999999999999999
Q ss_pred EecCCcEEEEEecCCCcceeEEEEecCC-------CCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccce
Q psy9770 676 GSRDNYIYVYEVSGDSRKYSRVGRCTGH-------SSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDV 748 (811)
Q Consensus 676 gs~dg~I~iwd~~~~~~~~~~~~~~~~h-------~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~ 748 (811)
|+.|++|++||+.++ ..+..+..+ ...|++++|+|+|++|++++.||.|++||+.+++.+..+..
T Consensus 267 ~s~D~~i~lwd~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~---- 338 (380)
T 3iz6_a 267 GSDDGTCRLFDMRTG----HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGT---- 338 (380)
T ss_dssp ECSSSCEEEEETTTT----EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECC----
T ss_pred EcCCCeEEEEECCCC----cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEec----
Confidence 999999999999986 344444333 23589999999999999999999999999988776543221
Q ss_pred eEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCCC
Q psy9770 749 VWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQP 805 (811)
Q Consensus 749 ~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~ 805 (811)
...+|...|++++|+|||++|++|+.||+|+||++...+.
T Consensus 339 -----------------~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 339 -----------------LQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp -----------------SCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred -----------------ccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 1135788999999999999999999999999999987653
No 27
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.6e-39 Score=355.04 Aligned_cols=311 Identities=16% Similarity=0.258 Sum_probs=267.6
Q ss_pred eEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEec
Q psy9770 330 HIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFH 409 (811)
Q Consensus 330 ~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fs 409 (811)
.+..|+.....+.+++. +|.+.|.+++|+| +|++|++ ++.|++|+|||+.+++ .+..+..|...|.+++|+
T Consensus 47 ~~~~~~~~~~~~~~~l~--gH~~~V~~~~~sp--~~~~l~s--~s~D~~v~iWd~~~~~---~~~~~~~h~~~v~~~~~s 117 (380)
T 3iz6_a 47 TAVSFNPTDLVCCRTLQ--GHSGKVYSLDWTP--EKNWIVS--ASQDGRLIVWNALTSQ---KTHAIKLHCPWVMECAFA 117 (380)
T ss_dssp GCCCCCCCCCEEEEEEC--CCSSCEEEEEECT--TSSCEEE--EETTSEEEEEETTTTE---EEEEEECCCTTCCCCEEC
T ss_pred cccccccceeEEeeccc--ccccEEEEEEEcC--CCCEEEE--EeCCCeEEEEECCCCc---cceEEecCCCCEEEEEEC
Confidence 45678888888888887 9999999999999 8999998 7999999999999998 899999999999999999
Q ss_pred CCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc--EEEEcCCCcEEEEecCCceEEEEee
Q psy9770 410 PLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE--VLSGDSNGNIIVWTRGSNTISKFIR 487 (811)
Q Consensus 410 p~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~--llsg~~dg~I~vwd~~~~~~~~~~~ 487 (811)
|++..+++++.|+.+++|++.+.............+.+|...+.++.|.|++. +++|+.|+.|++||+.+++.+..+.
T Consensus 118 ~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~ 197 (380)
T 3iz6_a 118 PNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFG 197 (380)
T ss_dssp TTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEEC
T ss_pred CCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEee
Confidence 98888877778999999999754322222222333477889999999999754 8899999999999999998887762
Q ss_pred ----cccccceEEEEEec-CCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEE
Q psy9770 488 ----NVHEGSVFSICVLK-EGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGS 562 (811)
Q Consensus 488 ----~~h~~~V~~l~~s~-dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d 562 (811)
.+|...|.+++|++ ++++|++|+.|+.|++||++....
T Consensus 198 ~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~------------------------------------- 240 (380)
T 3iz6_a 198 SEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR------------------------------------- 240 (380)
T ss_dssp CCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC-------------------------------------
T ss_pred cccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc-------------------------------------
Confidence 37899999999987 889999999999999999864322
Q ss_pred ccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCC--------CCeEEEEEcCCCCEEEEE
Q psy9770 563 LNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIA--------EQAQSATFSPDGSIIIVG 634 (811)
Q Consensus 563 ~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~--------~~v~~~~~spdg~~la~g 634 (811)
....+.+|.+.|.+++|+|++.+|++++.|++|++||+.+++.+..+... ..+.+++|+|+|++|++|
T Consensus 241 ----~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g 316 (380)
T 3iz6_a 241 ----AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAG 316 (380)
T ss_dssp ----CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEE
T ss_pred ----ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEE
Confidence 11235578999999999999999999999999999999999887765332 248999999999999999
Q ss_pred EeCCeEEEEecCCcceeEEe----cCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCC
Q psy9770 635 CIAGRWLVMDSETREAYSIH----TDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGD 690 (811)
Q Consensus 635 ~~dg~i~i~d~~~~~~~~~~----~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~ 690 (811)
+.||.|++||+.+++.+..+ .+|...|++++|+|||++|++|+.|+.|+||++...
T Consensus 317 ~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 317 YSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred ECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 99999999999998887776 679999999999999999999999999999998764
No 28
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=341.38 Aligned_cols=307 Identities=16% Similarity=0.237 Sum_probs=247.5
Q ss_pred CCCCc-eEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEE--EEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCC
Q psy9770 446 RDKPK-YVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTIS--KFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSN 521 (811)
Q Consensus 446 ~~~~~-~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~--~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~ 521 (811)
.+|.. .|.+++|+|+|+ +++|+.||.|+|||+.++... ..+..+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 12 ~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~ 91 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN 91 (345)
T ss_dssp CCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred cCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc
Confidence 55666 899999999999 669999999999999887643 23334899999999999999999999999999999976
Q ss_pred CCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEE
Q psy9770 522 LQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQL 601 (811)
Q Consensus 522 ~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~i 601 (811)
..... ....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 92 ~~~~~----------------------------------------~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~i 131 (345)
T 3fm0_A 92 QDDFE----------------------------------------CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWV 131 (345)
T ss_dssp CC-EE----------------------------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCeE----------------------------------------EEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEE
Confidence 54320 01235679999999999999999999999999999
Q ss_pred EeCCCCcE---EEE-ecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcc--eeEEecCCCCCeEEEEEccCCCEEEE
Q psy9770 602 WDSMSHSV---VWS-KDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETRE--AYSIHTDGNEPIQVVKFSPDGKLLAL 675 (811)
Q Consensus 602 wd~~~~~~---~~~-~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~i~~spdg~~las 675 (811)
||+.++.. +.. ..+...|.+++|+|++.+|++++.|+.|++||..+++ ....+.+|...|.+++|+|+|++|++
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s 211 (345)
T 3fm0_A 132 WEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLAS 211 (345)
T ss_dssp EEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEE
Confidence 99987643 333 3577899999999999999999999999999998775 45678899999999999999999999
Q ss_pred EecCCcEEEEEecCCC-----------cceeEEEEecC-CCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCC
Q psy9770 676 GSRDNYIYVYEVSGDS-----------RKYSRVGRCTG-HSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSS 743 (811)
Q Consensus 676 gs~dg~I~iwd~~~~~-----------~~~~~~~~~~~-h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~ 743 (811)
|+.|+.|+||+..... ..+.++..+.+ |...|.+++|+|++..|++++.|+.|++|+...+.......
T Consensus 212 ~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~ 291 (345)
T 3fm0_A 212 CSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPT 291 (345)
T ss_dssp EETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCC
T ss_pred EeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceee
Confidence 9999999999975432 12344555555 88999999999999999999999999999988654322111
Q ss_pred CccceeEeccceeeccceeeeCCCCCCCCccceEEecCCC-CEEEEEcCCCcEEEEeCCCCCCCCc
Q psy9770 744 QLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDA-RVIATGDDFGKLKLYSYPAVQPKLC 808 (811)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg-~~Las~~~dg~v~vw~~~~~~~~~~ 808 (811)
. .. ..-...+|...|++|+|+|++ .+||+|+.||+|+||++...+....
T Consensus 292 ~---------------~~-~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 292 F---------------SL-TAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp E---------------EE-EEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred E---------------EE-EeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 0 00 000123578899999999998 5999999999999999998876543
No 29
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=344.85 Aligned_cols=304 Identities=17% Similarity=0.218 Sum_probs=237.8
Q ss_pred EEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceee----eecccccccCCCCceEEE
Q psy9770 379 ISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLY----KKQGIFEMIRDKPKYVTC 454 (811)
Q Consensus 379 i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~----~~~~~~~~l~~~~~~v~~ 454 (811)
.+.|++.... ..+|...|.+++|+|++. ++++++++.+++||........ ...........+...|.+
T Consensus 16 ~r~w~~~~~~-------~~~~~~~v~~~~fs~dG~-~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 87 (344)
T 4gqb_B 16 AREWNLPPNA-------PACMERQLEAARYRSDGA-LLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVAD 87 (344)
T ss_dssp -------CCS-------CSSCCSEEEEEEECTTSC-EEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEE
T ss_pred ccccCCCCCC-------cccccCCEEEEEECCCCC-EEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEE
Confidence 4567765544 235677899999999765 5556668888888743110000 000011111223456999
Q ss_pred EEEcCCCcEEEEcCCCcEEEEecCCceEEEEe---ecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeee
Q psy9770 455 LAFTQGGEVLSGDSNGNIIVWTRGSNTISKFI---RNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQI 531 (811)
Q Consensus 455 l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~---~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~ 531 (811)
++|+|++.+++|+.||.|+|||+.+++....+ ..+|.+.|.+++|+|+|++|++|+.|++|++||+.++..
T Consensus 88 ~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~------ 161 (344)
T 4gqb_B 88 LTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV------ 161 (344)
T ss_dssp EEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------
T ss_pred EEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE------
Confidence 99999999999999999999999987654332 237999999999999999999999999999999986554
Q ss_pred ccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCC-eEEEEECCCeEEEEeCCCCcEE
Q psy9770 532 AEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLS-QFLTAGFDRIVQLWDSMSHSVV 610 (811)
Q Consensus 532 ~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~v~iwd~~~~~~~ 610 (811)
...+.+|...|.+++|+|++. +|++++.|++|++||+.+++..
T Consensus 162 ------------------------------------~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~ 205 (344)
T 4gqb_B 162 ------------------------------------LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPA 205 (344)
T ss_dssp ------------------------------------EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCE
T ss_pred ------------------------------------EEEEcCcCCceEEEEecCCCCCceeeecccccccccccccccee
Confidence 123557999999999999885 7899999999999999999887
Q ss_pred EEec---CCCCeEEEEEcCC-CCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCC-CEEEEEecCCcEEEE
Q psy9770 611 WSKD---IAEQAQSATFSPD-GSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDG-KLLALGSRDNYIYVY 685 (811)
Q Consensus 611 ~~~~---~~~~v~~~~~spd-g~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg-~~lasgs~dg~I~iw 685 (811)
..+. +...+.+++|+|+ +++|++|+.||.|++||+.+++++..+.+|...|++++|+|+| ++||+|+.|++|+||
T Consensus 206 ~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vw 285 (344)
T 4gqb_B 206 SQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVL 285 (344)
T ss_dssp EECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred eeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEE
Confidence 7753 3457899999995 6788999999999999999999999999999999999999998 589999999999999
Q ss_pred EecCCCcceeEEEEecCCCCCeeEEEeCCCCC-eEEEecCCceEEEEECCCCc
Q psy9770 686 EVSGDSRKYSRVGRCTGHSSFITHLDWSEDSM-YIRSNSGDYELLYWNAGTCR 737 (811)
Q Consensus 686 d~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~-~L~s~s~Dg~i~iWd~~~~~ 737 (811)
|+.++ .+..+.+|.+.|++++|+|+++ +|++++.|++|++|++.+..
T Consensus 286 d~~~~-----~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 286 DSSLS-----ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CTTCC-----EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred ECCCC-----cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 99875 2346789999999999999986 56789999999999998754
No 30
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.3e-38 Score=332.59 Aligned_cols=291 Identities=17% Similarity=0.330 Sum_probs=252.3
Q ss_pred ceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEE
Q psy9770 291 TQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCA 370 (811)
Q Consensus 291 ~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Las 370 (811)
.++.|.+|.+.|.+++|+||+++||+|+.|| .|+|||+.+++.+..+. .|...|.+++|+| ++++|++
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg--------~v~lWd~~~~~~~~~~~--~~~~~v~~~~~~~--~~~~l~s 72 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSG--------RVELWNYETQVEVRSIQ--VTETPVRAGKFIA--RKNWIIV 72 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTS--------EEEEEETTTTEEEEEEE--CCSSCEEEEEEEG--GGTEEEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCC--------cEEEEECCCCceeEEee--ccCCcEEEEEEeC--CCCEEEE
Confidence 3567899999999999999999999999999 99999999999999987 8999999999999 8999998
Q ss_pred EeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCc
Q psy9770 371 VDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPK 450 (811)
Q Consensus 371 v~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~ 450 (811)
++.|++|++||+.+++ ++..+.+|.+.|.+++|+|++..+++++.|+.|++||+.++..+... +.+|..
T Consensus 73 --~s~d~~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~------~~~h~~ 141 (304)
T 2ynn_A 73 --GSDDFRIRVFNYNTGE---KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT------FEGHEH 141 (304)
T ss_dssp --EETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEE------ECCCCS
T ss_pred --ECCCCEEEEEECCCCc---EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhh------hcccCC
Confidence 7999999999999999 89999999999999999998888888888999999999866444322 256888
Q ss_pred eEEEEEEcC-CCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEec--CCcEEEEecCCCcEEEEeCCCCCcc
Q psy9770 451 YVTCLAFTQ-GGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLK--EGSIISAGGKDGRLLQFDSNLQPTG 526 (811)
Q Consensus 451 ~v~~l~~s~-~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~--dg~~l~s~s~dg~I~~wd~~~~~~~ 526 (811)
.|.+++|+| ++. +++|+.||.|++||+..+.....+...|...|..+.|.+ ++.+|++++.|+.|++||+.....
T Consensus 142 ~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~- 220 (304)
T 2ynn_A 142 FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC- 220 (304)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE-
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc-
Confidence 899999999 455 679999999999999887766666657788999999987 778999999999999999976543
Q ss_pred ceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCC
Q psy9770 527 YEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMS 606 (811)
Q Consensus 527 ~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~ 606 (811)
...+.+|...|.+++|+|++++|++++.||+|++||+.+
T Consensus 221 -----------------------------------------~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 221 -----------------------------------------VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp -----------------------------------------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred -----------------------------------------ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 123567899999999999999999999999999999999
Q ss_pred CcEEEEec-CCCCeEEEEEcCCCC--EEEEEEeCCeEEEEecCC
Q psy9770 607 HSVVWSKD-IAEQAQSATFSPDGS--IIIVGCIAGRWLVMDSET 647 (811)
Q Consensus 607 ~~~~~~~~-~~~~v~~~~~spdg~--~la~g~~dg~i~i~d~~~ 647 (811)
++++..+. +...+.+++|+|++. ++++|+ +..+.+|++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~-~~g~~~~~~~~ 302 (304)
T 2ynn_A 260 YKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGN 302 (304)
T ss_dssp CCEEEEECCSSSSEEEEEECTTCGGGCEEEEE-TTEEEEEECC-
T ss_pred CceeeeccCCCccEEEEEECCCCCceEEEEec-CCceEEEEecc
Confidence 99888864 457899999999885 466665 45577777654
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.1e-38 Score=336.08 Aligned_cols=293 Identities=14% Similarity=0.191 Sum_probs=246.7
Q ss_pred cCCCCceEEEEEEcCCC-c-EEEEcCCCcEEEEecCC-----ceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEE
Q psy9770 445 IRDKPKYVTCLAFTQGG-E-VLSGDSNGNIIVWTRGS-----NTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQ 517 (811)
Q Consensus 445 l~~~~~~v~~l~~s~~g-~-llsg~~dg~I~vwd~~~-----~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~ 517 (811)
+.+|.+.|.+++|+|++ . +++|+.||+|++|++.. +..+..+. +|...|.+++|++++++|++++.|++|++
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK-GHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEe-CCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 47799999999999975 4 67999999999999864 33456676 89999999999999999999999999999
Q ss_pred EeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCC
Q psy9770 518 FDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDR 597 (811)
Q Consensus 518 wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg 597 (811)
||+.+++. ...+.+|...|.+++|+|++.+|++++.|+
T Consensus 92 wd~~~~~~------------------------------------------~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 129 (319)
T 3frx_A 92 WDVATGET------------------------------------------YQRFVGHKSDVMSVDIDKKASMIISGSRDK 129 (319)
T ss_dssp EETTTTEE------------------------------------------EEEEECCSSCEEEEEECTTSCEEEEEETTS
T ss_pred EECCCCCe------------------------------------------eEEEccCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 99976544 123457999999999999999999999999
Q ss_pred eEEEEeCCCCcEEEEecCCCCeEEEEEcCC------CCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCC
Q psy9770 598 IVQLWDSMSHSVVWSKDIAEQAQSATFSPD------GSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGK 671 (811)
Q Consensus 598 ~v~iwd~~~~~~~~~~~~~~~v~~~~~spd------g~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~ 671 (811)
+|++||+..........+...+.++.|+|. +..|++++.|+.|++||+.+++....+.+|...|.+++|+|+|+
T Consensus 130 ~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~ 209 (319)
T 3frx_A 130 TIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGT 209 (319)
T ss_dssp CEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSS
T ss_pred eEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCC
Confidence 999999986655555678889999999985 45899999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEe
Q psy9770 672 LLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWE 751 (811)
Q Consensus 672 ~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~ 751 (811)
+|++|+.||.|+|||+.++ +.+..+.. ...|.+++|+|++.+|++++.+ .+++|++..+..+..+.....
T Consensus 210 ~l~s~~~dg~i~iwd~~~~----~~~~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~---- 279 (319)
T 3frx_A 210 LIASAGKDGEIMLWNLAAK----KAMYTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFA---- 279 (319)
T ss_dssp EEEEEETTCEEEEEETTTT----EEEEEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCT----
T ss_pred EEEEEeCCCeEEEEECCCC----cEEEEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCcccc----
Confidence 9999999999999999886 44555554 4689999999999999988765 599999987655432211000
Q ss_pred ccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy9770 752 SNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAV 803 (811)
Q Consensus 752 ~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~ 803 (811)
-....+...+.+++|+|||++|++|+.||.|+||++.++
T Consensus 280 -------------~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 280 -------------GYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp -------------TCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred -------------ccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 001124567899999999999999999999999998764
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.7e-38 Score=336.57 Aligned_cols=326 Identities=14% Similarity=0.129 Sum_probs=276.2
Q ss_pred CCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCc
Q psy9770 298 HTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDY 377 (811)
Q Consensus 298 h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~ 377 (811)
|...|.+++|+|||+++|++..++ .+.+|+........... +|...|.+++|+| ++++|++ ++ |+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~--~~~~l~~--~~-dg 72 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPD--------ALIGPGIPRHARQINTL--NHGEVVCAVTISN--PTRHVYT--GG-KG 72 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTT--------SSSSTTCCSEEEEEEEE--CCSSCCCEEEECS--SSSEEEE--EC-BS
T ss_pred cCCceeEEEECCCCCEEEeecCCC--------cEeccccCCccccceec--cCCCceEEEEEec--CCcEEEE--cC-CC
Confidence 456899999999999999988766 56667665544443333 7999999999999 8999998 45 99
Q ss_pred eEEEEEcccCCCcceEEEee--eCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEE
Q psy9770 378 NISVWDWQKSDRGHKITETK--CSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCL 455 (811)
Q Consensus 378 ~i~vWd~~~~~~~~~~~~~~--~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l 455 (811)
.|++||+.++.....+..+. .|...|.+++|+|++..+++++.++.|++|++.++...... .+..|...+.++
T Consensus 73 ~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-----~~~~~~~~i~~~ 147 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA-----ELTSSAPACYAL 147 (337)
T ss_dssp EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEE-----EEECSSSCEEEE
T ss_pred eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceee-----ecccCCCceEEE
Confidence 99999999876333444444 78899999999998888888888999999999865522111 124567789999
Q ss_pred EEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccc
Q psy9770 456 AFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEH 534 (811)
Q Consensus 456 ~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~ 534 (811)
+|+|++. +++++.||.|++||+.+++....+. .|...|.+++|+|++++|++++.||.|++||+.....
T Consensus 148 ~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~--------- 217 (337)
T 1gxr_A 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ--------- 217 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE---------
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCceeeeee-cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce---------
Confidence 9999998 5699999999999999999998888 8999999999999999999999999999999976543
Q ss_pred cCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEec
Q psy9770 535 LGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKD 614 (811)
Q Consensus 535 ~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 614 (811)
.....|...+.+++|+|++++|++++.|+.|++||+.+++......
T Consensus 218 ----------------------------------~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~ 263 (337)
T 1gxr_A 218 ----------------------------------LQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL 263 (337)
T ss_dssp ----------------------------------EEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC
T ss_pred ----------------------------------EeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcC
Confidence 0112356678999999999999999999999999999998877778
Q ss_pred CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEec
Q psy9770 615 IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVS 688 (811)
Q Consensus 615 ~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~ 688 (811)
+...+.+++|+|++++|++++.||.|++||+.+++.+... .|...|.+++|+|++++|++++.||.|++|++.
T Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 8899999999999999999999999999999999887554 477899999999999999999999999999974
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3e-38 Score=346.71 Aligned_cols=291 Identities=22% Similarity=0.377 Sum_probs=247.3
Q ss_pred CCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccc------------------cceEEEEEecCCcEEEE
Q psy9770 447 DKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHE------------------GSVFSICVLKEGSIISA 508 (811)
Q Consensus 447 ~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~------------------~~V~~l~~s~dg~~l~s 508 (811)
+|...|.|++|+|+|++++.+.++.+++|++.+++.+..+. .|. ..|.+++|+|+|++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLS-DDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEEC-C-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEec-CccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 47788999999999997655568999999999998887765 332 24899999999999999
Q ss_pred ecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCC
Q psy9770 509 GGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLS 588 (811)
Q Consensus 509 ~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~ 588 (811)
|+.|+.|++||+...+. ...+.+|...|.+++|+|++.
T Consensus 141 ~~~d~~i~iwd~~~~~~------------------------------------------~~~~~~h~~~v~~~~~~p~~~ 178 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKI------------------------------------------VMILQGHEQDIYSLDYFPSGD 178 (393)
T ss_dssp EETTSCEEEEETTTTEE------------------------------------------EEEECCCSSCEEEEEECTTSS
T ss_pred EcCCCeEEEEECCCCcE------------------------------------------EEEEccCCCCEEEEEEcCCCC
Confidence 99999999999876543 123557899999999999999
Q ss_pred eEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcC-CCCEEEEEEeCCeEEEEecCCcceeEEe-------cCCCCC
Q psy9770 589 QFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSP-DGSIIIVGCIAGRWLVMDSETREAYSIH-------TDGNEP 660 (811)
Q Consensus 589 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp-dg~~la~g~~dg~i~i~d~~~~~~~~~~-------~~~~~~ 660 (811)
+|++++.|++|++||+.+++....+.+...+.+++|+| ++++|++|+.||.|++||+.+++.+..+ .+|...
T Consensus 179 ~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~ 258 (393)
T 1erj_A 179 KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS 258 (393)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC
T ss_pred EEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC
Confidence 99999999999999999999988888889999999999 9999999999999999999999887766 578899
Q ss_pred eEEEEEccCCCEEEEEecCCcEEEEEecCCCc--------ceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEE
Q psy9770 661 IQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR--------KYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWN 732 (811)
Q Consensus 661 i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~--------~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd 732 (811)
|.+++|+|+|++|++|+.|+.|++||+..... ...+...+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 259 v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 259 VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD 338 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999999999999999976422 1234556789999999999999999999999999999999
Q ss_pred CCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecC------CCCEEEEEcCCCcEEEEeCCCCCC
Q psy9770 733 AGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSH------DARVIATGDDFGKLKLYSYPAVQP 805 (811)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~------dg~~Las~~~dg~v~vw~~~~~~~ 805 (811)
+.+++.+..+ .+|...|.+++|++ ++++||+|+.||+|+||++...++
T Consensus 339 ~~~~~~~~~l-------------------------~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~p 392 (393)
T 1erj_A 339 KKSGNPLLML-------------------------QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKIAP 392 (393)
T ss_dssp TTTCCEEEEE-------------------------ECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC--
T ss_pred CCCCeEEEEE-------------------------CCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccccCC
Confidence 9988765432 24677899999876 789999999999999999876543
No 34
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=6.4e-37 Score=377.99 Aligned_cols=499 Identities=14% Similarity=0.043 Sum_probs=366.0
Q ss_pred eEEEEEeeecCCCCccceEEccCCcEEEEeccEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCC
Q psy9770 249 LKLDWVYGYRGKDCRSNLYLLPTGEIVYFVAAVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGK 328 (811)
Q Consensus 249 l~l~~v~g~~~~~~~~~l~~spdg~~l~~~~~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~ 328 (811)
++|+...|.........++|+|+ .+++...+.|++|++.+++.+.+.+|...|.+++|||||++||+++.++. ....
T Consensus 3 ~kl~~~~g~~~~~~~~~~~~S~~-~iaf~~~~~l~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~--~~~~ 79 (1045)
T 1k32_A 3 FKLHEMHGLCMPNLLLNPDIHGD-RIIFVCCDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGS--SLNT 79 (1045)
T ss_dssp ----------CCCCCEEEEEETT-EEEEEETTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEEST--TCCE
T ss_pred ccccccccccccceEeCcEEeCC-EEEEEECCcEEEEECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeecc--CCCC
Confidence 55656555544455677888863 45555568999999999999999999999999999999999998875410 0012
Q ss_pred CeEEEEeCCCCcEEEEeccCCccccE-------EEEEEecCCCCcEEEEEeCCC------CceEEEEEcccCCCc-----
Q psy9770 329 PHIRIWNSVSLFTVSIIGIGEFERSI-------SCLSFSKADGGTFLCAVDEGN------DYNISVWDWQKSDRG----- 390 (811)
Q Consensus 329 ~~I~iWd~~t~~~~~~l~~~~h~~~V-------~~l~fs~~~dg~~Lasv~~s~------d~~i~vWd~~~~~~~----- 390 (811)
..|++||+.+++ ...+. .|...+ ..++||| ||+++++ ++. ...|.+|++.+++..
T Consensus 80 ~~i~~~d~~~g~-~~~lt--~~~~~~~~~~~~~~~~~~Sp--Dg~ll~~--~~~~~~~~~~~~l~~~~~~~g~~~~l~~~ 152 (1045)
T 1k32_A 80 ADLYFYNGENGE-IKRIT--YFSGKSTGRRMFTDVAGFDP--DGNLIIS--TDAMQPFSSMTCLYRVENDGINFVPLNLG 152 (1045)
T ss_dssp EEEEEEETTTTE-EEECC--CCCEEEETTEECSEEEEECT--TCCEEEE--ECTTSSSTTCCEEEEEEGGGTEEEECCSC
T ss_pred CeEEEEECCCCC-eEEcc--cCCCcccccccccccccCCC--CCEEEEE--ECCcCCCcccceEEEEECCCCCeEEecCC
Confidence 389999999887 45554 788888 9999999 8886665 333 246888887665410
Q ss_pred -----------------------------------------ceEEEeeeCCCcEEEEEecCCCCCeEEEEC-CCcEEEEE
Q psy9770 391 -----------------------------------------HKITETKCSVDTVVAAEFHPLDRNNIVTCG-KSHINFWT 428 (811)
Q Consensus 391 -----------------------------------------~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~-d~~i~iwd 428 (811)
.....+..|...+..+.|+++ .+++++. ++.+.+|.
T Consensus 153 ~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~ 230 (1045)
T 1k32_A 153 PATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RIYFITDIDGFGQIYS 230 (1045)
T ss_dssp SCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT--EEEEEECTTSSCEEEE
T ss_pred CcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC--EEEEEEeccCceEEEE
Confidence 011233556778888889875 4554444 68899998
Q ss_pred EcCC-ceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeec----------ccccceEEE
Q psy9770 429 IDAG-GTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRN----------VHEGSVFSI 497 (811)
Q Consensus 429 ~~~~-~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~----------~h~~~V~~l 497 (811)
++.. ...... ..+. .+...+|+|||+.++...++.|++||+...... .+.. .|...+.++
T Consensus 231 ~~~~g~~~~~l-------~~~~-~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~ 301 (1045)
T 1k32_A 231 TDLDGKDLRKH-------TSFT-DYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAE 301 (1045)
T ss_dssp EETTSCSCEEC-------CCCC-SSCEEEEEESSSCEEEEETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEE
T ss_pred EeCCCCcceEe-------cCCC-CcceeeEcCCCCEEEEEeCCEEEEecCCceEee-eeccCccccccccccccccccee
Confidence 8742 222221 1122 245679999999543346999999999654443 4431 144579999
Q ss_pred EEe-cCCcEEEEecCCCcEEEEeCCCCCccceeeeccccC-CeEEEeeCCCC-eEEEEeCCCeEE-EEEccCCceeeeee
Q psy9770 498 CVL-KEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLG-GIRTVSEGRGS-QLIVGTTRNCIL-VGSLNLGFSPVVLG 573 (811)
Q Consensus 498 ~~s-~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~-~v~~l~~~~~~-~l~~~~~~~~i~-~~d~~~~~~~~~~~ 573 (811)
+|+ |||+.|++++ ++.|++|+...+.. ..+..+.. .+..++++ ++ .++.++.++.++ +|++..+....+.+
T Consensus 302 ~~S~pdG~~la~~~-~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~ 376 (1045)
T 1k32_A 302 DFSPLDGDLIAFVS-RGQAFIQDVSGTYV---LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEE 376 (1045)
T ss_dssp EEEECGGGCEEEEE-TTEEEEECTTSSBE---EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred eecCCCCCEEEEEE-cCEEEEEcCCCCce---EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecC
Confidence 999 9999888777 88999999987654 34555666 78889999 65 456666677888 89998876666668
Q ss_pred cccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEeCC----------eEEE
Q psy9770 574 HTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK-DIAEQAQSATFSPDGSIIIVGCIAG----------RWLV 642 (811)
Q Consensus 574 h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~dg----------~i~i 642 (811)
|...+..++|+|++++|++++.++.|++||+.+++..... .+...+.+++|+|||++|++++.++ .|++
T Consensus 377 ~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l 456 (1045)
T 1k32_A 377 NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV 456 (1045)
T ss_dssp CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEE
Confidence 8889999999999999999999999999999999887765 6778889999999999999887754 8999
Q ss_pred EecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCc------------------------------
Q psy9770 643 MDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR------------------------------ 692 (811)
Q Consensus 643 ~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~------------------------------ 692 (811)
||+.+++ +..+..|...+..++|+|||++|++++.++...+|+......
T Consensus 457 ~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (1045)
T 1k32_A 457 YDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTS 535 (1045)
T ss_dssp EETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSC
T ss_pred EECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCcccc
Confidence 9999887 666777888899999999999999999877766665332110
Q ss_pred ---------ceeEEEEecCCCCCeeEEEeCCCCCeEEE-------------ecCCceEEEEECCCCcccCCCCCccceeE
Q psy9770 693 ---------KYSRVGRCTGHSSFITHLDWSEDSMYIRS-------------NSGDYELLYWNAGTCRQIPQSSQLRDVVW 750 (811)
Q Consensus 693 ---------~~~~~~~~~~h~~~V~~l~~spdg~~L~s-------------~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~ 750 (811)
....+..+..|.+.+..++|+|||+++++ ......|.+||+.+++....
T Consensus 536 ~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l--------- 606 (1045)
T 1k32_A 536 EAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEV--------- 606 (1045)
T ss_dssp CCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEE---------
T ss_pred ccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEe---------
Confidence 00122344557788999999999988875 12356888999988763210
Q ss_pred eccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCC
Q psy9770 751 ESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQ 804 (811)
Q Consensus 751 ~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~ 804 (811)
...+.+++|||||++|++++.+ .|++|++.+++
T Consensus 607 --------------------~~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 607 --------------------KNNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp --------------------EEEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred --------------------ecCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 1247789999999999999876 79999999887
No 35
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.6e-38 Score=330.65 Aligned_cols=290 Identities=15% Similarity=0.171 Sum_probs=252.9
Q ss_pred eEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCC
Q psy9770 392 KITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNG 470 (811)
Q Consensus 392 ~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg 470 (811)
....+.+|.+.|.+++|+|++..+++++.|+.|++||+.++..+... ..|...|.+++|+|+++ +++|+.|+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSI-------QVTETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-------ECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEe-------eccCCcEEEEEEeCCCCEEEEECCCC
Confidence 56788999999999999999988888888999999999977665544 45667899999999998 56999999
Q ss_pred cEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEE
Q psy9770 471 NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLI 550 (811)
Q Consensus 471 ~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~ 550 (811)
.|++||+.+++.+..+. +|...|.+++|+|++.+|++|+.||+|++||+.....
T Consensus 78 ~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~------------------------- 131 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA------------------------- 131 (304)
T ss_dssp EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE-------------------------
T ss_pred EEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc-------------------------
Confidence 99999999999999988 9999999999999999999999999999999865422
Q ss_pred EEeCCCeEEEEEccCCceeeeeecccceEEEEECC-CCCeEEEEECCCeEEEEeCCCCcEEEEe--cCCCCeEEEEEcC-
Q psy9770 551 VGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHP-SLSQFLTAGFDRIVQLWDSMSHSVVWSK--DIAEQAQSATFSP- 626 (811)
Q Consensus 551 ~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp-~~~~l~s~s~dg~v~iwd~~~~~~~~~~--~~~~~v~~~~~sp- 626 (811)
....+.+|...|.+++|+| ++.+|++++.|++|++||+.+....... .+...+..+.|+|
T Consensus 132 ----------------~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 195 (304)
T 2ynn_A 132 ----------------LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL 195 (304)
T ss_dssp ----------------EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCS
T ss_pred ----------------hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEc
Confidence 0123457889999999999 6789999999999999999877655443 4557899999986
Q ss_pred -CCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCC
Q psy9770 627 -DGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSS 705 (811)
Q Consensus 627 -dg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~ 705 (811)
++.+|++|+.||.|++||+.+++++..+.+|...|.+++|+|++.+|++|+.||.|+|||+.++ +.+..+..|..
T Consensus 196 ~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~----~~~~~~~~~~~ 271 (304)
T 2ynn_A 196 PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY----KVEKTLNVGLE 271 (304)
T ss_dssp TTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC----CEEEEECCSSS
T ss_pred CCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC----ceeeeccCCCc
Confidence 7889999999999999999999999999999999999999999999999999999999999886 56777889999
Q ss_pred CeeEEEeCCCCC--eEEEecCCceEEEEECCC
Q psy9770 706 FITHLDWSEDSM--YIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 706 ~V~~l~~spdg~--~L~s~s~Dg~i~iWd~~~ 735 (811)
.+.+++|+|++. +|++++.| .+.+|++..
T Consensus 272 ~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 272 RSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp SEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred cEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 999999999875 57777655 577787764
No 36
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=339.66 Aligned_cols=298 Identities=15% Similarity=0.136 Sum_probs=238.8
Q ss_pred EEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCC---------CccceeeeccccCCeEEEe
Q psy9770 472 IIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQ---------PTGYEAQIAEHLGGIRTVS 542 (811)
Q Consensus 472 I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~---------~~~~~~~~~~~~~~v~~l~ 542 (811)
.+.|++..... . .|...|.+++|+|||++|++++ |+++++||.... ..........+...|.+++
T Consensus 16 ~r~w~~~~~~~----~-~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 89 (344)
T 4gqb_B 16 AREWNLPPNAP----A-CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLT 89 (344)
T ss_dssp -------CCSC----S-SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEE
T ss_pred ccccCCCCCCc----c-cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEE
Confidence 35666543322 1 5777899999999999999777 777888873211 0011122334556799999
Q ss_pred eCCCCeEEEEeCCCeEEEEEccCCce-----eeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe-cCC
Q psy9770 543 EGRGSQLIVGTTRNCILVGSLNLGFS-----PVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK-DIA 616 (811)
Q Consensus 543 ~~~~~~l~~~~~~~~i~~~d~~~~~~-----~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~-~~~ 616 (811)
|++++.+++++.+|.|++||+.++.. ....+|.+.|.+++|+|++++|++++.|++|++||+.+++++..+ .|.
T Consensus 90 ~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~ 169 (344)
T 4gqb_B 90 WVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHA 169 (344)
T ss_dssp EETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcC
Confidence 99999999999999999999987632 234589999999999999999999999999999999999988885 578
Q ss_pred CCeEEEEEcCCCC-EEEEEEeCCeEEEEecCCcceeEEec--CCCCCeEEEEEccC-CCEEEEEecCCcEEEEEecCCCc
Q psy9770 617 EQAQSATFSPDGS-IIIVGCIAGRWLVMDSETREAYSIHT--DGNEPIQVVKFSPD-GKLLALGSRDNYIYVYEVSGDSR 692 (811)
Q Consensus 617 ~~v~~~~~spdg~-~la~g~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~i~~spd-g~~lasgs~dg~I~iwd~~~~~~ 692 (811)
..|.+++|+|++. +|++++.||.|++||+.+++....+. .+...+.+++|+|+ +++|++|+.||.|+|||+.++
T Consensus 170 ~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~-- 247 (344)
T 4gqb_B 170 AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST-- 247 (344)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---
T ss_pred CceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC--
Confidence 9999999999985 78899999999999999999887764 45567899999995 578999999999999999886
Q ss_pred ceeEEEEecCCCCCeeEEEeCCCC-CeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCC
Q psy9770 693 KYSRVGRCTGHSSFITHLDWSEDS-MYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADG 771 (811)
Q Consensus 693 ~~~~~~~~~~h~~~V~~l~~spdg-~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~ 771 (811)
+++..+.+|...|++++|+|++ ++|++++.|++|++||+.+++.+. ..+|.
T Consensus 248 --~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~--------------------------~~~H~ 299 (344)
T 4gqb_B 248 --SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR--------------------------SQAHR 299 (344)
T ss_dssp ---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE--------------------------ECCCS
T ss_pred --cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE--------------------------EcCCC
Confidence 4566788999999999999998 589999999999999998876432 13578
Q ss_pred CccceEEecCCCC-EEEEEcCCCcEEEEeCCCCCC
Q psy9770 772 TDVNSCERSHDAR-VIATGDDFGKLKLYSYPAVQP 805 (811)
Q Consensus 772 ~~I~~l~~s~dg~-~Las~~~dg~v~vw~~~~~~~ 805 (811)
..|++|+|+|+++ +|++++.||+|++|++++...
T Consensus 300 ~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 300 DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 8999999999986 677999999999999987543
No 37
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.7e-37 Score=330.43 Aligned_cols=294 Identities=16% Similarity=0.246 Sum_probs=239.0
Q ss_pred EEeccCCCCeEEEEEcCCC-cEEEEeeccCCCCCCCCCeEEEEeCCC-----CcEEEEeccCCccccEEEEEEecCCCCc
Q psy9770 293 RHYLGHTDDIKCLSIHPNK-LLIATGQVAGHDAREGKPHIRIWNSVS-----LFTVSIIGIGEFERSISCLSFSKADGGT 366 (811)
Q Consensus 293 ~~~~~h~~~V~~la~spdg-~~Lasg~~dg~~~~~~~~~I~iWd~~t-----~~~~~~l~~~~h~~~V~~l~fs~~~dg~ 366 (811)
..+.+|.+.|.+++|+|++ ++||+|+.|+ +|++||+.+ +..+..+. +|...|.+++|+| +|+
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~--------~v~~W~~~~~~~~~~~~~~~~~--~h~~~v~~~~~s~--dg~ 78 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDK--------TLISWKLTGDDQKFGVPVRSFK--GHSHIVQDCTLTA--DGA 78 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTS--------EEEEEEEEEETTEEEEEEEEEE--CCSSCEEEEEECT--TSS
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCc--------cEEEecCCCCCccccccceEEe--CCcccEEEEEECC--CCC
Confidence 4578999999999999965 8999999999 999999864 33456665 9999999999999 899
Q ss_pred EEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccC
Q psy9770 367 FLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIR 446 (811)
Q Consensus 367 ~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~ 446 (811)
+|++ ++.|++|+|||+.+++ .+..+.+|...|.+++|+|++..+++++.|+.|++|++. +..+... .
T Consensus 79 ~l~s--~s~D~~v~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~-------~ 145 (319)
T 3frx_A 79 YALS--ASWDKTLRLWDVATGE---TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATL-------L 145 (319)
T ss_dssp EEEE--EETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEE-------C
T ss_pred EEEE--EeCCCEEEEEECCCCC---eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEE-------e
Confidence 9998 7999999999999998 899999999999999999977766666777788888765 3222221 3
Q ss_pred CCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCcc
Q psy9770 447 DKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTG 526 (811)
Q Consensus 447 ~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~ 526 (811)
+|...|.++.|.|.+.. .+++..|++++.|+.|++||+.....
T Consensus 146 ~h~~~v~~~~~~~~~~~------------------------------------~~~~~~l~s~~~d~~i~~wd~~~~~~- 188 (319)
T 3frx_A 146 GHNDWVSQVRVVPNEKA------------------------------------DDDSVTIISAGNDKMVKAWNLNQFQI- 188 (319)
T ss_dssp CCSSCEEEEEECCC------------------------------------------CCEEEEEETTSCEEEEETTTTEE-
T ss_pred ccCCcEEEEEEccCCCC------------------------------------CCCccEEEEEeCCCEEEEEECCcchh-
Confidence 34444555544443210 11455788899999999998865433
Q ss_pred ceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCC
Q psy9770 527 YEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMS 606 (811)
Q Consensus 527 ~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~ 606 (811)
...+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 189 -----------------------------------------~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 189 -----------------------------------------EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp -----------------------------------------EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred -----------------------------------------heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 123457889999999999999999999999999999999
Q ss_pred CcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecC--------CCCCeEEEEEccCCCEEEEEec
Q psy9770 607 HSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTD--------GNEPIQVVKFSPDGKLLALGSR 678 (811)
Q Consensus 607 ~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~--------~~~~i~~i~~spdg~~lasgs~ 678 (811)
++.+..+.....+.+++|+|++.+|++++. +.+++|++.....+..+.. +...+.+++|+|||++|++|+.
T Consensus 228 ~~~~~~~~~~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~ 306 (319)
T 3frx_A 228 KKAMYTLSAQDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYT 306 (319)
T ss_dssp TEEEEEEECCSCEEEEEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEET
T ss_pred CcEEEEecCCCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeec
Confidence 999988888889999999999999998875 5599999998877666543 3567899999999999999999
Q ss_pred CCcEEEEEecCC
Q psy9770 679 DNYIYVYEVSGD 690 (811)
Q Consensus 679 dg~I~iwd~~~~ 690 (811)
||.|+|||+.++
T Consensus 307 Dg~i~vWd~~t~ 318 (319)
T 3frx_A 307 DNVIRVWQVMTA 318 (319)
T ss_dssp TSCEEEEEEEEC
T ss_pred CceEEEEEEeec
Confidence 999999999763
No 38
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=334.90 Aligned_cols=306 Identities=16% Similarity=0.241 Sum_probs=248.5
Q ss_pred eEEEeeeCCC-cEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCC
Q psy9770 392 KITETKCSVD-TVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSN 469 (811)
Q Consensus 392 ~~~~~~~~~~-~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~d 469 (811)
++..+.+|.. .|..++|+|++..+++++.|+.|++|++..+....... ...+|...|.+++|+|++. +++|+.|
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~----~~~~h~~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSV----LSEGHQRTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEE----ECSSCSSCEEEEEECTTSSEEEEEETT
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeee----eccccCCcEEEEEECCCCCEEEEEECC
Confidence 6778889988 99999999999888888889999999998654332211 1156888999999999998 5699999
Q ss_pred CcEEEEecCCc--eEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCC
Q psy9770 470 GNIIVWTRGSN--TISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGS 547 (811)
Q Consensus 470 g~I~vwd~~~~--~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 547 (811)
+.|++|+...+ +....+. +|...|.+++|+|++++|++++.|+.|++||+..... ..
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~------------~~-------- 141 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE------------YE-------- 141 (345)
T ss_dssp SCEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC------------EE--------
T ss_pred CcEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC------------eE--------
Confidence 99999998876 3556676 8999999999999999999999999999999875432 00
Q ss_pred eEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEE--EE-ecCCCCeEEEEE
Q psy9770 548 QLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVV--WS-KDIAEQAQSATF 624 (811)
Q Consensus 548 ~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~--~~-~~~~~~v~~~~~ 624 (811)
....+.+|...|.+++|+|++.+|++++.|+.|++||..+++.. .. ..|...|.+++|
T Consensus 142 -------------------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~ 202 (345)
T 3fm0_A 142 -------------------CVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF 202 (345)
T ss_dssp -------------------EEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred -------------------EEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEE
Confidence 01234578889999999999999999999999999999887543 23 467889999999
Q ss_pred cCCCCEEEEEEeCCeEEEEecCCc---------------ceeEEecC-CCCCeEEEEEccCCCEEEEEecCCcEEEEEec
Q psy9770 625 SPDGSIIIVGCIAGRWLVMDSETR---------------EAYSIHTD-GNEPIQVVKFSPDGKLLALGSRDNYIYVYEVS 688 (811)
Q Consensus 625 spdg~~la~g~~dg~i~i~d~~~~---------------~~~~~~~~-~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~ 688 (811)
+|+|++|++++.||.|++||.... +++..+.+ |...|.+++|+|++.+|++++.|+.|++|+..
T Consensus 203 sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~ 282 (345)
T 3fm0_A 203 DPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQED 282 (345)
T ss_dssp CTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEEC
T ss_pred CCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeC
Confidence 999999999999999999996322 23344444 78899999999999999999999999999997
Q ss_pred CCCc----ceeEE-EEecCCCCCeeEEEeCCCC-CeEEEecCCceEEEEECCCCcccCC
Q psy9770 689 GDSR----KYSRV-GRCTGHSSFITHLDWSEDS-MYIRSNSGDYELLYWNAGTCRQIPQ 741 (811)
Q Consensus 689 ~~~~----~~~~~-~~~~~h~~~V~~l~~spdg-~~L~s~s~Dg~i~iWd~~~~~~~~~ 741 (811)
.+.. .+... ....+|...|++++|+|++ .+||+++.||+|++|++.+++....
T Consensus 283 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 283 PNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp TTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred CCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 6532 12222 2346899999999999998 5999999999999999998876543
No 39
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.7e-38 Score=335.33 Aligned_cols=325 Identities=17% Similarity=0.232 Sum_probs=273.1
Q ss_pred ccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEE
Q psy9770 350 FERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTI 429 (811)
Q Consensus 350 h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~ 429 (811)
+...|.+++|+| ||+++++ +..++.+.+|+..... .......|...|.+++|+|++..+++++ ++.|++|++
T Consensus 8 ~~~~v~~~~~s~--dg~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~ 79 (337)
T 1gxr_A 8 GSKPAYSFHVTA--DGQMQPV--PFPPDALIGPGIPRHA---RQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDI 79 (337)
T ss_dssp EEEECCEEEECS--SSCEEEC--CCCTTSSSSTTCCSEE---EEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEET
T ss_pred cCCceeEEEECC--CCCEEEe--ecCCCcEeccccCCcc---ccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEEC
Confidence 467899999999 8999986 5666666666554443 4555568999999999999766665555 999999999
Q ss_pred cCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCce--EEEEeecccccceEEEEEecCCcEE
Q psy9770 430 DAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNT--ISKFIRNVHEGSVFSICVLKEGSII 506 (811)
Q Consensus 430 ~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~--~~~~~~~~h~~~V~~l~~s~dg~~l 506 (811)
.++....... .+.. ..|...+.+++|+|+++ +++++.||.|++||+.+++ ....+. .|...|.+++|+|++++|
T Consensus 80 ~~~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l 156 (337)
T 1gxr_A 80 SHPGNKSPVS-QLDC-LNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT-SSAPACYALAISPDSKVC 156 (337)
T ss_dssp TSTTCCSCSE-EEEC-SCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE-CSSSCEEEEEECTTSSEE
T ss_pred CCCCceeeee-cccc-cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc-cCCCceEEEEECCCCCEE
Confidence 8655332221 1111 36778899999999998 6699999999999999876 455555 799999999999999999
Q ss_pred EEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCC
Q psy9770 507 SAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPS 586 (811)
Q Consensus 507 ~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~ 586 (811)
++++.||.|++||+..... ...+..|...|.+++|+|+
T Consensus 157 ~~~~~dg~v~~~d~~~~~~------------------------------------------~~~~~~~~~~i~~~~~~~~ 194 (337)
T 1gxr_A 157 FSCCSDGNIAVWDLHNQTL------------------------------------------VRQFQGHTDGASCIDISND 194 (337)
T ss_dssp EEEETTSCEEEEETTTTEE------------------------------------------EEEECCCSSCEEEEEECTT
T ss_pred EEEeCCCcEEEEeCCCCce------------------------------------------eeeeecccCceEEEEECCC
Confidence 9999999999999876543 1223468889999999999
Q ss_pred CCeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEE
Q psy9770 587 LSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKF 666 (811)
Q Consensus 587 ~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~ 666 (811)
+++|++++.|+.|++||+.+++.+....+...+.+++|+|++++|++++.+|.|++||+.+++.. .+..|...|.+++|
T Consensus 195 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~ 273 (337)
T 1gxr_A 195 GTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKF 273 (337)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEE
T ss_pred CCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEE
Confidence 99999999999999999999999988889999999999999999999999999999999988764 56778999999999
Q ss_pred ccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEEC
Q psy9770 667 SPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNA 733 (811)
Q Consensus 667 spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~ 733 (811)
+|++++|++++.||.|++|++.++.. + ....|...|.+++|+|++++|++++.||.|++|++
T Consensus 274 ~~~~~~l~~~~~dg~i~~~~~~~~~~----~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 274 AYCGKWFVSTGKDNLLNAWRTPYGAS----I-FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCE----E-EEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCCCEEEEecCCCcEEEEECCCCeE----E-EEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 99999999999999999999998642 2 22358899999999999999999999999999996
No 40
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-36 Score=322.34 Aligned_cols=285 Identities=20% Similarity=0.318 Sum_probs=248.8
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCC
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQP 524 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~ 524 (811)
.+|...|.+++|+|+++ +++++.||.|++|+..+++....+. .|...|.+++|+|++++|++++.|+.|++||+....
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~ 98 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 98 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc-cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc
Confidence 67889999999999998 5699999999999999999888887 899999999999999999999999999999987654
Q ss_pred ccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeC
Q psy9770 525 TGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDS 604 (811)
Q Consensus 525 ~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~ 604 (811)
. ...+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 99 ~------------------------------------------~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~ 136 (312)
T 4ery_A 99 C------------------------------------------LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 136 (312)
T ss_dssp E------------------------------------------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred E------------------------------------------EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 3 1234578889999999999999999999999999999
Q ss_pred CCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEec-CCCCCeEEEEEccCCCEEEEEecCCcE
Q psy9770 605 MSHSVVWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHT-DGNEPIQVVKFSPDGKLLALGSRDNYI 682 (811)
Q Consensus 605 ~~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~i~~spdg~~lasgs~dg~I 682 (811)
.+++.+..+ .+...+.+++|+|++++|++++.||.|++||+.+++.+..+. .+...+..++|+|++++|++++.|+.|
T Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 216 (312)
T 4ery_A 137 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 216 (312)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEE
T ss_pred CCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 999887775 467889999999999999999999999999999998877664 456789999999999999999999999
Q ss_pred EEEEecCCCcceeEEEEecCCCCCee---EEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeecc
Q psy9770 683 YVYEVSGDSRKYSRVGRCTGHSSFIT---HLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTF 759 (811)
Q Consensus 683 ~iwd~~~~~~~~~~~~~~~~h~~~V~---~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (811)
++||+.++ +.+..+.+|...+. .....+++.+|++++.||.|++||+.+++.+..+
T Consensus 217 ~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~----------------- 275 (312)
T 4ery_A 217 KLWDYSKG----KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL----------------- 275 (312)
T ss_dssp EEEETTTT----EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEE-----------------
T ss_pred EEEECCCC----cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhh-----------------
Confidence 99999886 56667777876543 2333468899999999999999999988765433
Q ss_pred ceeeeCCCCCCCCccceEEecCCCCEEEEEc--CCCcEEEEeCCC
Q psy9770 760 TTIGIWPEGADGTDVNSCERSHDARVIATGD--DFGKLKLYSYPA 802 (811)
Q Consensus 760 ~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~--~dg~v~vw~~~~ 802 (811)
.+|...|.+++|+|++++|++++ .||+|++|+.++
T Consensus 276 --------~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d~ 312 (312)
T 4ery_A 276 --------QGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 312 (312)
T ss_dssp --------CCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECCC
T ss_pred --------hccCCcEEEEeecCcCCceEEEEccCCccEEEecCCC
Confidence 24677899999999999999986 699999999764
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-39 Score=355.46 Aligned_cols=334 Identities=12% Similarity=0.176 Sum_probs=273.6
Q ss_pred CCCeEEEEEcCCCc-EEEEe----------eccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcE
Q psy9770 299 TDDIKCLSIHPNKL-LIATG----------QVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTF 367 (811)
Q Consensus 299 ~~~V~~la~spdg~-~Lasg----------~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~ 367 (811)
...|.+++|+|+++ +||+| +.|+ .|+|||+.+++....+....|...|.+++|+| ++.+
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~--------~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~ 81 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDS--------SLELWSLLAADSEKPIASLQVDSKFNDLDWSH--NNKI 81 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCC--------CCEEEESSSGGGCSCSCCCCCSSCEEEEEECS--SSSC
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCC--------eEEEEEccCCCCCcEEEEEecCCceEEEEECC--CCCe
Confidence 35788999999997 99999 6666 99999999886332222226889999999999 8999
Q ss_pred EEEEeCCCCceEEEEEcccCCCc-ceEEEeeeCCCcEEEEEecCC-CCCeEEEECCCcEEEEEEcCCc------eeeeec
Q psy9770 368 LCAVDEGNDYNISVWDWQKSDRG-HKITETKCSVDTVVAAEFHPL-DRNNIVTCGKSHINFWTIDAGG------TLYKKQ 439 (811)
Q Consensus 368 Lasv~~s~d~~i~vWd~~~~~~~-~~~~~~~~~~~~V~~v~fsp~-~~~ll~~~~d~~i~iwd~~~~~------~~~~~~ 439 (811)
|++ ++.|+.|++||+.+.... ..+..+..|...|.+++|+|+ +..+++++.|+.|++||+.++. ....
T Consensus 82 l~~--~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-- 157 (416)
T 2pm9_A 82 IAG--ALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLT-- 157 (416)
T ss_dssp EEE--EESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBC--
T ss_pred EEE--EccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccc--
Confidence 988 788999999999982211 178889999999999999998 4555555558999999998665 2211
Q ss_pred ccccccCCCCceEEEEEEcCC-Cc-EEEEcCCCcEEEEecCCceEEEEeeccc------ccceEEEEEecCC-cEEEEec
Q psy9770 440 GIFEMIRDKPKYVTCLAFTQG-GE-VLSGDSNGNIIVWTRGSNTISKFIRNVH------EGSVFSICVLKEG-SIISAGG 510 (811)
Q Consensus 440 ~~~~~l~~~~~~v~~l~~s~~-g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h------~~~V~~l~~s~dg-~~l~s~s 510 (811)
...+..|...|.+++|+|+ +. +++++.||.|++||+.+++....+. .| ...|.+++|+|++ .+|++++
T Consensus 158 --~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 234 (416)
T 2pm9_A 158 --PGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS-YTSPNSGIKQQLSVVEWHPKNSTRVATAT 234 (416)
T ss_dssp --CCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC-CCCCSSCCCCCEEEEEECSSCTTEEEEEE
T ss_pred --cccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe-ccccccccCCceEEEEECCCCCCEEEEEE
Confidence 1122567788999999999 45 6699999999999999999888887 44 7899999999997 6899999
Q ss_pred CCC---cEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeee-ecccceEEEEECC-
Q psy9770 511 KDG---RLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL-GHTDELWALAAHP- 585 (811)
Q Consensus 511 ~dg---~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~-~h~~~v~~l~~sp- 585 (811)
.|+ .|++||+..... ....+. +|...|.+++|+|
T Consensus 235 ~d~~~~~i~~~d~~~~~~-----------------------------------------~~~~~~~~~~~~v~~~~~s~~ 273 (416)
T 2pm9_A 235 GSDNDPSILIWDLRNANT-----------------------------------------PLQTLNQGHQKGILSLDWCHQ 273 (416)
T ss_dssp CCSSSCCCCEEETTSTTS-----------------------------------------CSBCCCSCCSSCEEEEEECSS
T ss_pred CCCCCceEEEEeCCCCCC-----------------------------------------CcEEeecCccCceeEEEeCCC
Confidence 998 999999986432 012233 6888999999999
Q ss_pred CCCeEEEEECCCeEEEEeCCCCcEEEEe-cCCCCeEEEEEcCCC-CEEEEEEeCCeEEEEecCCcceeEEecC-------
Q psy9770 586 SLSQFLTAGFDRIVQLWDSMSHSVVWSK-DIAEQAQSATFSPDG-SIIIVGCIAGRWLVMDSETREAYSIHTD------- 656 (811)
Q Consensus 586 ~~~~l~s~s~dg~v~iwd~~~~~~~~~~-~~~~~v~~~~~spdg-~~la~g~~dg~i~i~d~~~~~~~~~~~~------- 656 (811)
++.+|++++.|+.|++||+.+++.+..+ .+...|.+++|+|++ .+|++++.||.|++||+.+.........
T Consensus 274 ~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 353 (416)
T 2pm9_A 274 DEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQE 353 (416)
T ss_dssp CSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC---------
T ss_pred CCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccC
Confidence 8999999999999999999999888774 577899999999999 8999999999999999987654322211
Q ss_pred ----------------------------CCCCeEEEEEccCCCEEEEEecCCcEEEEEecCC
Q psy9770 657 ----------------------------GNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGD 690 (811)
Q Consensus 657 ----------------------------~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~ 690 (811)
+..++..++|+|||++||+++.|+.|+||++.++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 354 SETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred CcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 5677889999999999999999999999998764
No 42
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-37 Score=328.49 Aligned_cols=296 Identities=15% Similarity=0.240 Sum_probs=231.9
Q ss_pred CCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCc--eEEEEeecc-cccceEEEEEecCCcEEEEecCCCcEEEEeCCC
Q psy9770 446 RDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSN--TISKFIRNV-HEGSVFSICVLKEGSIISAGGKDGRLLQFDSNL 522 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~--~~~~~~~~~-h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~ 522 (811)
.+|...|.+++|+++ .+++|+.||.|++||+..+ .....+... |...|.+++|+|++++|++++.|+.|++||+..
T Consensus 11 ~~h~~~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp ECCSSCEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--
T ss_pred ccCCCceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEccc
Confidence 668889999999998 6779999999999999875 445555224 999999999999999999999999999999863
Q ss_pred CCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEE
Q psy9770 523 QPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLW 602 (811)
Q Consensus 523 ~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iw 602 (811)
... ... .......+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 90 ~~~-~~~----------------------------------~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iw 134 (330)
T 2hes_X 90 SAD-RTF----------------------------------EMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIW 134 (330)
T ss_dssp ------C----------------------------------CCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CcC-ccc----------------------------------cceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 221 000 000123456899999999999999999999999999999
Q ss_pred eCCCC----cEEEE-ecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCc--ceeEEecCCCCCeEEEEEccC--CCEE
Q psy9770 603 DSMSH----SVVWS-KDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETR--EAYSIHTDGNEPIQVVKFSPD--GKLL 673 (811)
Q Consensus 603 d~~~~----~~~~~-~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~i~~spd--g~~l 673 (811)
|+... +++.. ..|...|.+++|+|++.+|++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +.+|
T Consensus 135 d~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 214 (330)
T 2hes_X 135 ETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRL 214 (330)
T ss_dssp ECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEE
T ss_pred eccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEE
Confidence 99432 34444 457889999999999999999999999999998766 678889999999999999999 7799
Q ss_pred EEEecCCcEEEEEecCCC----cceeEEEEecC-CCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcc--cCCCCCcc
Q psy9770 674 ALGSRDNYIYVYEVSGDS----RKYSRVGRCTG-HSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQ--IPQSSQLR 746 (811)
Q Consensus 674 asgs~dg~I~iwd~~~~~----~~~~~~~~~~~-h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~--~~~~~~~~ 746 (811)
++|+.|++|++|++..+. ..+.....+.+ |...|.+++|++++ +|++++.||.|++|+..+++. +..
T Consensus 215 ~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~----- 288 (330)
T 2hes_X 215 CSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAK----- 288 (330)
T ss_dssp EEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEE-----
T ss_pred EEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEec-----
Confidence 999999999999997642 12234445555 99999999999765 899999999999999876531 110
Q ss_pred ceeEeccceeeccceeeeCCCCCCCC-ccceEEecC--CCCEEEEEcCCCcEEEEeCCC
Q psy9770 747 DVVWESNSCTLTFTTIGIWPEGADGT-DVNSCERSH--DARVIATGDDFGKLKLYSYPA 802 (811)
Q Consensus 747 ~~~~~~~~~~~~~~~~~i~~~~~h~~-~I~~l~~s~--dg~~Las~~~dg~v~vw~~~~ 802 (811)
....|.. .|++++|+| ++++||+|+.||+|+||++..
T Consensus 289 -------------------~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 289 -------------------RALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp -------------------ESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred -------------------cccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 0123454 799999999 789999999999999999865
No 43
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.6e-36 Score=320.14 Aligned_cols=289 Identities=17% Similarity=0.282 Sum_probs=253.1
Q ss_pred eEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCC
Q psy9770 392 KITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNG 470 (811)
Q Consensus 392 ~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg 470 (811)
....+.+|...|.+++|+|++..+++++.|+.|++|++.++...... .+|...|.+++|+|+++ +++++.||
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~d~ 87 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-------SGHKLGISDVAWSSDSNLLVSASDDK 87 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh-------ccCCCceEEEEEcCCCCEEEEECCCC
Confidence 46678899999999999998888888888999999999876655443 56778899999999998 56999999
Q ss_pred cEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEE
Q psy9770 471 NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLI 550 (811)
Q Consensus 471 ~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~ 550 (811)
.|++||+.+++.+..+. .|...|.+++|+|++++|++++.||.|++||+.....
T Consensus 88 ~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~------------------------- 141 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC------------------------- 141 (312)
T ss_dssp EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE-------------------------
T ss_pred EEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE-------------------------
Confidence 99999999999999888 8999999999999999999999999999999976543
Q ss_pred EEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe--cCCCCeEEEEEcCCC
Q psy9770 551 VGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK--DIAEQAQSATFSPDG 628 (811)
Q Consensus 551 ~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~--~~~~~v~~~~~spdg 628 (811)
...+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+ .+...+..++|+|++
T Consensus 142 -----------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (312)
T 4ery_A 142 -----------------LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 204 (312)
T ss_dssp -----------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTS
T ss_pred -----------------EEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCC
Confidence 1223467888999999999999999999999999999999887764 345689999999999
Q ss_pred CEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEE--EEE-ccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCC
Q psy9770 629 SIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQV--VKF-SPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSS 705 (811)
Q Consensus 629 ~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~--i~~-spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~ 705 (811)
++|++++.||.|++||+.+++.+..+.+|...+.. ..| .+++.+|++|+.||.|++||+.++ +.+..+.+|..
T Consensus 205 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~ 280 (312)
T 4ery_A 205 KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK----EIVQKLQGHTD 280 (312)
T ss_dssp SEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC----CEEEEECCCSS
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc----hhhhhhhccCC
Confidence 99999999999999999999999999887665332 233 468899999999999999999886 56778899999
Q ss_pred CeeEEEeCCCCCeEEEec--CCceEEEEECC
Q psy9770 706 FITHLDWSEDSMYIRSNS--GDYELLYWNAG 734 (811)
Q Consensus 706 ~V~~l~~spdg~~L~s~s--~Dg~i~iWd~~ 734 (811)
.|.+++|+|++++|++++ .|+.|++|+.+
T Consensus 281 ~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 281 VVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred cEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999999986 69999999864
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.3e-38 Score=346.30 Aligned_cols=346 Identities=14% Similarity=0.112 Sum_probs=285.4
Q ss_pred CeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEE
Q psy9770 301 DIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNIS 380 (811)
Q Consensus 301 ~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~ 380 (811)
.+++++|+|++++|++|+.++ .|++||+.+++....+. .| ..+....|++ +|++|++ ++.|+.|+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~--------~v~i~d~~~~~~~~~~~--~~-~~~~~~~~~~--~~~~l~~--~~~dg~i~ 122 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDG--------HDFLFNTIIRDGSKMLK--RA-DYTAVDTAKL--QMRRFIL--GTTEGDIK 122 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETT--------EEEEEECCSEETTTTSC--SC-CEEEEEEECS--SSCEEEE--EETTSCEE
T ss_pred cccceeeeecCCeEEEEEcCC--------cEEEEEecccceeeEEe--cC-CceEEEEEec--CCCEEEE--EECCCCEE
Confidence 455789999999999999999 99999999887665543 44 4455557888 8999998 78999999
Q ss_pred EEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCC
Q psy9770 381 VWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQG 460 (811)
Q Consensus 381 vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~ 460 (811)
+||+.+++ ....+..|...|.+++|+|++..+++++.|+.|++||+.+++.+... .+|...|.+++|+|+
T Consensus 123 iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-------~~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 123 VLDSNFNL---QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL-------IGHRATVTDIAIIDR 192 (420)
T ss_dssp EECTTSCE---EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE-------ECCSSCEEEEEEETT
T ss_pred EEeCCCcc---eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE-------cCCCCcEEEEEEcCC
Confidence 99999887 77778899999999999998888888888999999999977665543 567788999999999
Q ss_pred Cc-EEEEcCCCcEEEEecCCceEEEEeec--ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCC
Q psy9770 461 GE-VLSGDSNGNIIVWTRGSNTISKFIRN--VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGG 537 (811)
Q Consensus 461 g~-llsg~~dg~I~vwd~~~~~~~~~~~~--~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~ 537 (811)
+. +++++.||.|++||+.+++....+.. .|...|.+++|.+++...
T Consensus 193 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------------------------------- 241 (420)
T 3vl1_A 193 GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ------------------------------- 241 (420)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS-------------------------------
T ss_pred CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce-------------------------------
Confidence 98 66999999999999999998888762 356778888877643211
Q ss_pred eEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe--cC
Q psy9770 538 IRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK--DI 615 (811)
Q Consensus 538 v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~--~~ 615 (811)
....+...+.+++|+|++++|++++.||.|++||+.+++....+ .+
T Consensus 242 --------------------------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 289 (420)
T 3vl1_A 242 --------------------------------LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF 289 (420)
T ss_dssp --------------------------------CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT
T ss_pred --------------------------------eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc
Confidence 01124456778889999999999999999999999998877765 35
Q ss_pred CCCeEEEEEcCCCC-EEEEEEeCCeEEEEecCCcce-eEEecC-CCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCc
Q psy9770 616 AEQAQSATFSPDGS-IIIVGCIAGRWLVMDSETREA-YSIHTD-GNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR 692 (811)
Q Consensus 616 ~~~v~~~~~spdg~-~la~g~~dg~i~i~d~~~~~~-~~~~~~-~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~ 692 (811)
...+.+++|+|++. +|++|+.||.|++||+.+++. +..+.. |...|.++. .+++++|++++.|+.|++|++.....
T Consensus 290 ~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 290 TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGALFVSSGFDTSIKLDIISDPES 368 (420)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTEEEEEETTTEEEEEEEECCTTC
T ss_pred CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCCEEEEecCCccEEEEeccCCCC
Confidence 68899999999999 999999999999999998754 666665 667788875 56888999999999999999987432
Q ss_pred ce-----eEEEEecCCCCCeeEEEeCCCCC---eEEEecCCceEEEEECCC
Q psy9770 693 KY-----SRVGRCTGHSSFITHLDWSEDSM---YIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 693 ~~-----~~~~~~~~h~~~V~~l~~spdg~---~L~s~s~Dg~i~iWd~~~ 735 (811)
.. .....+.+|...|.+++|+|+++ .|++++.+|.+.+|++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 369 ERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred CccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 21 11224568899999999999999 777778899999999864
No 45
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.1e-36 Score=324.23 Aligned_cols=297 Identities=15% Similarity=0.117 Sum_probs=245.0
Q ss_pred eEEEeeeCCCcEEEEEe-----cC-CCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE
Q psy9770 392 KITETKCSVDTVVAAEF-----HP-LDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL 464 (811)
Q Consensus 392 ~~~~~~~~~~~V~~v~f-----sp-~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll 464 (811)
+...+.+|.+.|.+++| ++ ++..+++++.|+.|++|++...............+.+|...|.+++|+|++. ++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 56778999999999999 66 5566666667999999999854321111111223467889999999999998 56
Q ss_pred EEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeC
Q psy9770 465 SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEG 544 (811)
Q Consensus 465 sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~ 544 (811)
+|+.||.|++||+.+++....+. +|...|.+++|+|++++|++++.|+.|++||+.............|...+.+++++
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~ 171 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYS 171 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEEC
T ss_pred EEcCCCcEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeec
Confidence 99999999999999999998888 89999999999999999999999999999999743331222234678889999998
Q ss_pred CCC-----------eEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCC-CCcEEEE
Q psy9770 545 RGS-----------QLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSM-SHSVVWS 612 (811)
Q Consensus 545 ~~~-----------~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~-~~~~~~~ 612 (811)
+.+ .+++++.++.|++||........+.+|...|.+++|+|++++|++++.|+.|++||+. .......
T Consensus 172 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~ 251 (343)
T 2xzm_R 172 PIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQRE 251 (343)
T ss_dssp CCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEE
T ss_pred cccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccccee
Confidence 874 6888999999999997666667788999999999999999999999999999999994 4445555
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeE--Eec-----------CCCCCeEEEEEccCCCEEEEEecC
Q psy9770 613 KDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYS--IHT-----------DGNEPIQVVKFSPDGKLLALGSRD 679 (811)
Q Consensus 613 ~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~--~~~-----------~~~~~i~~i~~spdg~~lasgs~d 679 (811)
+.+...|.+++|+|++.+++++ .|+.|++||+.+++... .+. +|...|.+++|+|+|++|++|+.|
T Consensus 252 ~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D 330 (343)
T 2xzm_R 252 FDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD 330 (343)
T ss_dssp EECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred ecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence 5567789999999999988765 57889999998776433 333 577889999999999999999999
Q ss_pred CcEEEEEecCC
Q psy9770 680 NYIYVYEVSGD 690 (811)
Q Consensus 680 g~I~iwd~~~~ 690 (811)
|.|++|++.++
T Consensus 331 g~v~~w~~~~g 341 (343)
T 2xzm_R 331 GVIRTFSFETS 341 (343)
T ss_dssp SEEEEEEEEEE
T ss_pred ceEEEEEEEcc
Confidence 99999998764
No 46
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.7e-36 Score=322.17 Aligned_cols=289 Identities=17% Similarity=0.252 Sum_probs=243.5
Q ss_pred EEeccCCCCeEEEEE-----cC-CCcEEEEeeccCCCCCCCCCeEEEEeCCCC-------cEEEEeccCCccccEEEEEE
Q psy9770 293 RHYLGHTDDIKCLSI-----HP-NKLLIATGQVAGHDAREGKPHIRIWNSVSL-------FTVSIIGIGEFERSISCLSF 359 (811)
Q Consensus 293 ~~~~~h~~~V~~la~-----sp-dg~~Lasg~~dg~~~~~~~~~I~iWd~~t~-------~~~~~l~~~~h~~~V~~l~f 359 (811)
..+.+|.+.|++++| ++ |+++||+|+.|+ +|+|||+.+. .....+. +|...|.+++|
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~--------~v~iWd~~~~~~~~~~~~~~~~l~--~h~~~V~~~~~ 84 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDK--------TVMIWKLYEEEQNGYFGIPHKALT--GHNHFVSDLAL 84 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTS--------CEEEEEECSSCCSSBSEEEEEEEC--CCSSCEEEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCC--------EEEEEECCcCCcccccccccchhc--cCCCceEEEEE
Confidence 568899999999999 77 999999999999 9999998753 3455555 99999999999
Q ss_pred ecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeec
Q psy9770 360 SKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQ 439 (811)
Q Consensus 360 s~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~ 439 (811)
+| ++.+|++ ++.|++|++||+++++ .+..+.+|...|.+++|+|++..+++++.|+.|++||+. +.......
T Consensus 85 ~~--~~~~l~s--~s~D~~v~lwd~~~~~---~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~-~~~~~~~~ 156 (343)
T 2xzm_R 85 SQ--ENCFAIS--SSWDKTLRLWDLRTGT---TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL-GECKFSSA 156 (343)
T ss_dssp CS--STTEEEE--EETTSEEEEEETTSSC---EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS-SCEEEECC
T ss_pred CC--CCCEEEE--EcCCCcEEEEECCCCc---EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc-CCceeeee
Confidence 99 8999998 7999999999999998 899999999999999999988888888889999999997 43332211
Q ss_pred ccccccCCCCceEEEEEEcCCC----------c-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEE
Q psy9770 440 GIFEMIRDKPKYVTCLAFTQGG----------E-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISA 508 (811)
Q Consensus 440 ~~~~~l~~~~~~v~~l~~s~~g----------~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 508 (811)
....|...|.+++|+|++ . +++++.||.|++||. ..+....+. .|...|.+++|+|+|++|++
T Consensus 157 ----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~-~h~~~v~~~~~s~~g~~l~s 230 (343)
T 2xzm_R 157 ----EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK-AHESNVNHLSISPNGKYIAT 230 (343)
T ss_dssp ----TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE-CCSSCEEEEEECTTSSEEEE
T ss_pred ----cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc-CccccceEEEECCCCCEEEE
Confidence 114677889999999986 4 679999999999995 456666676 89999999999999999999
Q ss_pred ecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCcee---ee-----------eec
Q psy9770 509 GGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSP---VV-----------LGH 574 (811)
Q Consensus 509 ~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~---~~-----------~~h 574 (811)
|+.||.|++||+..... ... ...+...|.+++++|++.+++++.++.|++|++.+.... .+ .+|
T Consensus 231 gs~dg~v~iwd~~~~~~-~~~-~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (343)
T 2xzm_R 231 GGKDKKLLIWDILNLTY-PQR-EFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGK 308 (343)
T ss_dssp EETTCEEEEEESSCCSS-CSE-EEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCS
T ss_pred EcCCCeEEEEECCCCcc-cce-eecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCC
Confidence 99999999999944332 112 223455699999999999999999999999998765321 22 268
Q ss_pred ccceEEEEECCCCCeEEEEECCCeEEEEeCCCC
Q psy9770 575 TDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH 607 (811)
Q Consensus 575 ~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~ 607 (811)
...|.+++|+|++++|++|+.||.|++|++.++
T Consensus 309 ~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 309 NPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 889999999999999999999999999997654
No 47
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.5e-36 Score=326.73 Aligned_cols=291 Identities=15% Similarity=0.253 Sum_probs=243.2
Q ss_pred eeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccc-----------cCCCCceEEEEEEcCCCc-E
Q psy9770 396 TKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEM-----------IRDKPKYVTCLAFTQGGE-V 463 (811)
Q Consensus 396 ~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~-----------l~~~~~~v~~l~~s~~g~-l 463 (811)
...|...|.+++|+|++..+ +++.++.+++|++.++..+......... ...+...|.+++|+|+|+ +
T Consensus 60 ~~~h~~~V~~v~fspdg~~l-a~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 60 SLDHTSVVCCVKFSNDGEYL-ATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp EEECSSCCCEEEECTTSSEE-EEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred ecCCCCEEEEEEECCCCCEE-EEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 34699999999999976655 4556889999999987766554322110 012234599999999998 5
Q ss_pred EEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEee
Q psy9770 464 LSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSE 543 (811)
Q Consensus 464 lsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~ 543 (811)
++|+.||.|++||+.+++....+. +|...|.+++|+|++.+|++++.|+.|++||+..+...
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~----------------- 200 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQ-GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS----------------- 200 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-----------------
T ss_pred EEEcCCCeEEEEECCCCcEEEEEc-cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE-----------------
Confidence 699999999999999999988888 99999999999999999999999999999999765430
Q ss_pred CCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECC-CCCeEEEEECCCeEEEEeCCCCcEEEEe--------c
Q psy9770 544 GRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHP-SLSQFLTAGFDRIVQLWDSMSHSVVWSK--------D 614 (811)
Q Consensus 544 ~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp-~~~~l~s~s~dg~v~iwd~~~~~~~~~~--------~ 614 (811)
....+...+.+++|+| ++.+|++++.|+.|++||+.+++.+..+ .
T Consensus 201 --------------------------~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 254 (393)
T 1erj_A 201 --------------------------LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTG 254 (393)
T ss_dssp --------------------------EEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CC
T ss_pred --------------------------EEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCC
Confidence 0112455688999999 8999999999999999999998877654 4
Q ss_pred CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCc------------ceeEEecCCCCCeEEEEEccCCCEEEEEecCCcE
Q psy9770 615 IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETR------------EAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYI 682 (811)
Q Consensus 615 ~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~------------~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I 682 (811)
|...|.+++|+|+|++|++|+.||.|++||+.+. .+...+.+|...|.+++|+|++.+|++|+.|+.|
T Consensus 255 h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v 334 (393)
T 1erj_A 255 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 334 (393)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEE
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeE
Confidence 6778999999999999999999999999999753 3455677899999999999999999999999999
Q ss_pred EEEEecCCCcceeEEEEecCCCCCeeEEEeCC------CCCeEEEecCCceEEEEECCC
Q psy9770 683 YVYEVSGDSRKYSRVGRCTGHSSFITHLDWSE------DSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 683 ~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp------dg~~L~s~s~Dg~i~iWd~~~ 735 (811)
++||+.++ +.+..+.+|...|.+++|++ ++++|++++.||.|++|++..
T Consensus 335 ~iwd~~~~----~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 335 LFWDKKSG----NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEETTTC----CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEECCCC----eEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 99999886 45667889999999999986 688999999999999999864
No 48
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.4e-35 Score=316.25 Aligned_cols=306 Identities=16% Similarity=0.201 Sum_probs=251.6
Q ss_pred EEEEeC--CCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCC--cceEEEeeeCCCcEEEE
Q psy9770 331 IRIWNS--VSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDR--GHKITETKCSVDTVVAA 406 (811)
Q Consensus 331 I~iWd~--~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~--~~~~~~~~~~~~~V~~v 406 (811)
+.++.. ++.++..+|. +|.+.|++|+|+| +++++|++ ++.|++|+|||+.+.+. ..+...+.+|...|.++
T Consensus 18 ~~~~~~~~~~~~l~~tL~--GH~~~V~~v~~sp-~~~~~l~S--~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~ 92 (340)
T 4aow_A 18 LYFQSMMTEQMTLRGTLK--GHNGWVTQIATTP-QFPDMILS--ASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 92 (340)
T ss_dssp --------CEEEEEEEEC--CCSSCEEEEEECT-TCTTEEEE--EETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEE
T ss_pred EEEEEccCCceEEEEEEC--CccCCEEEEEEeC-CCCCEEEE--EcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEE
Confidence 444443 3445556666 9999999999999 34789998 78999999999987652 22467788999999999
Q ss_pred EecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEE
Q psy9770 407 EFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKF 485 (811)
Q Consensus 407 ~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~ 485 (811)
+|+|++..+++++.|+.|++|+.......... ..+...+..+.+.+++. +++++.||.+++||.........
T Consensus 93 ~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~ 165 (340)
T 4aow_A 93 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-------VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTV 165 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEE-------ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred EECCCCCEEEEEcccccceEEeecccceeeee-------cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEE
Confidence 99999888888888999999999865544443 33445688899999988 67999999999999987766555
Q ss_pred eecccccceEEEEEecCC--cEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEc
Q psy9770 486 IRNVHEGSVFSICVLKEG--SIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSL 563 (811)
Q Consensus 486 ~~~~h~~~V~~l~~s~dg--~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~ 563 (811)
....|...+..++|++++ .++++++.|+.|++||+.....
T Consensus 166 ~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~-------------------------------------- 207 (340)
T 4aow_A 166 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL-------------------------------------- 207 (340)
T ss_dssp CSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE--------------------------------------
T ss_pred EeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce--------------------------------------
Confidence 545899999999998764 5788899999999999876544
Q ss_pred cCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEE
Q psy9770 564 NLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVM 643 (811)
Q Consensus 564 ~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~ 643 (811)
...+.+|.+.|.+++|+|++++|++++.|+.|++||+.+.+.+..+.....+.+++|+|++.++ +++.|+.|++|
T Consensus 208 ----~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iw 282 (340)
T 4aow_A 208 ----KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPSIKIW 282 (340)
T ss_dssp ----EEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEETTEEEEE
T ss_pred ----eeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCcee-eccCCCEEEEE
Confidence 1234578889999999999999999999999999999999999998888999999999998655 55679999999
Q ss_pred ecCCcceeEEec---------CCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCC
Q psy9770 644 DSETREAYSIHT---------DGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDS 691 (811)
Q Consensus 644 d~~~~~~~~~~~---------~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~ 691 (811)
|+.++..+..+. .|...|++++|+|||++|++|+.||.|+|||+.+|.
T Consensus 283 d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 283 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 999887665543 578899999999999999999999999999999873
No 49
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-37 Score=348.94 Aligned_cols=352 Identities=13% Similarity=0.096 Sum_probs=248.4
Q ss_pred ccCCCCeEEEEEcCCC---------cEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCc
Q psy9770 296 LGHTDDIKCLSIHPNK---------LLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGT 366 (811)
Q Consensus 296 ~~h~~~V~~la~spdg---------~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~ 366 (811)
..+.+.|.+|+|+|++ ++||+|+.++ .. . ..+| +++
T Consensus 130 ~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~--------~~--------------~-----------~~~~--~~~ 174 (524)
T 2j04_B 130 YNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQY--------MD--------------E-----------PLNE--HLE 174 (524)
T ss_dssp EECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC----------------------------------------------
T ss_pred EECCCceeEEEecccCCCCccCcCCeEEEEEEecc--------cC--------------C-----------ccch--hhh
Confidence 3467899999999987 8999998765 10 0 1267 889
Q ss_pred EEEEEeCCCCceEEEEEcccCCCcc-eEEEeeeCCCcEEEEEecCC------CCCeEEEECCCcEEEEEEcCCceee---
Q psy9770 367 FLCAVDEGNDYNISVWDWQKSDRGH-KITETKCSVDTVVAAEFHPL------DRNNIVTCGKSHINFWTIDAGGTLY--- 436 (811)
Q Consensus 367 ~Lasv~~s~d~~i~vWd~~~~~~~~-~~~~~~~~~~~V~~v~fsp~------~~~ll~~~~d~~i~iwd~~~~~~~~--- 436 (811)
+|++ ++.|++|+|||+.+++... ....+..|.+.|..++|+|+ +..+++++.|+.|++|++..+....
T Consensus 175 ~laS--~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~ 252 (524)
T 2j04_B 175 MFDK--EKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF 252 (524)
T ss_dssp ---------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE
T ss_pred hhcc--CCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc
Confidence 9988 8999999999998876211 12446778899999999996 2345556669999999998653220
Q ss_pred -eecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCce-EEEEeecccccceEEE--EEecCC-cEEEEecC
Q psy9770 437 -KKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNT-ISKFIRNVHEGSVFSI--CVLKEG-SIISAGGK 511 (811)
Q Consensus 437 -~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~-~~~~~~~~h~~~V~~l--~~s~dg-~~l~s~s~ 511 (811)
........+.+|...|.+++|++++.+++|+.||+|++||+.++. ....+. +|...|.++ +|+++| .+|++++.
T Consensus 253 ~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 253 KMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp ECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred eeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEee-cccccEEEEEEEcCCCCCeEEEEecc
Confidence 111111223668889999999998778899999999999998764 344566 899999999 567887 89999999
Q ss_pred CCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecc--cceEEEEECCCCCe
Q psy9770 512 DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHT--DELWALAAHPSLSQ 589 (811)
Q Consensus 512 dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~--~~v~~l~~sp~~~~ 589 (811)
|++|++||+...... ..+.+|. ..|.+++|+|+++.
T Consensus 332 D~tvklWD~~~~~~~------------------------------------------~~~~~~~~~~~v~~v~fsp~~~~ 369 (524)
T 2j04_B 332 DGYFYIFNPKDIATT------------------------------------------KTTVSRFRGSNLVPVVYCPQIYS 369 (524)
T ss_dssp TSEEEEECGGGHHHH------------------------------------------CEEEEECSCCSCCCEEEETTTTE
T ss_pred CCeEEEEECCCCCcc------------------------------------------cccccccccCcccceEeCCCcCe
Confidence 999999998765430 1122343 24778999999999
Q ss_pred EEEEECCCeEEEEeCCCCcEEEE-ecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecC-----CCCCeEE
Q psy9770 590 FLTAGFDRIVQLWDSMSHSVVWS-KDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTD-----GNEPIQV 663 (811)
Q Consensus 590 l~s~s~dg~v~iwd~~~~~~~~~-~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~-----~~~~i~~ 663 (811)
|++++.|++|++||+.++.++.. ..|...|.+++|+|+|++|++|+.||.|++||+..+ .+..+.. +...|..
T Consensus 370 l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~ 448 (524)
T 2j04_B 370 YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWK 448 (524)
T ss_dssp EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEE
T ss_pred EEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEE
Confidence 99999999999999999887554 578899999999999999999999999999998654 2222211 1124678
Q ss_pred EEEccCCCEEEEEecCCcEEEEEec-CCCcceeEEEEecCCCCCeeEEEeCCCCC---eEEEecCCceEEEEECCC
Q psy9770 664 VKFSPDGKLLALGSRDNYIYVYEVS-GDSRKYSRVGRCTGHSSFITHLDWSEDSM---YIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 664 i~~spdg~~lasgs~dg~I~iwd~~-~~~~~~~~~~~~~~h~~~V~~l~~spdg~---~L~s~s~Dg~i~iWd~~~ 735 (811)
++|+|+|..+.. .. .+++|... ++ ..+..+.+|...|.+|+|+|++. .||+|+.||.|+||++.-
T Consensus 449 v~~sp~g~~~~~-~~--~~~~~~~~~~g----~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 449 WDYSIKDDKYRI-DS--SYEVYPLTVND----VSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp CBCCSSSCEEEE-CC--CCCCCC-----------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred eccCCCCCeEEc-cC--CceecccccCC----cceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 999999985532 22 23344332 12 35567889999999999999964 999999999999999864
No 50
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.1e-35 Score=327.57 Aligned_cols=317 Identities=17% Similarity=0.297 Sum_probs=275.5
Q ss_pred EEeccCCCCe-EEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEE
Q psy9770 293 RHYLGHTDDI-KCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAV 371 (811)
Q Consensus 293 ~~~~~h~~~V-~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv 371 (811)
..+.+|.+.| .| ++++|++||+|+.|| .|+|||+.+++.+..+. +|...|.+++|++ .+|++
T Consensus 112 ~~l~~h~~~v~~~--~~~~g~~l~sg~~dg--------~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~----~~l~s- 174 (445)
T 2ovr_B 112 KVLKGHDDHVITC--LQFCGNRIVSGSDDN--------TLKVWSAVTGKCLRTLV--GHTGGVWSSQMRD----NIIIS- 174 (445)
T ss_dssp EEEECSTTSCEEE--EEEETTEEEEEETTS--------CEEEEETTTCCEEEECC--CCSSCEEEEEEET----TEEEE-
T ss_pred EEecccCCCcEEE--EEEcCCEEEEEECCC--------cEEEEECCCCcEEEEEc--CCCCCEEEEEecC----CEEEE-
Confidence 5678998875 55 455789999999999 99999999999999987 9999999999985 67877
Q ss_pred eCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCce
Q psy9770 372 DEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKY 451 (811)
Q Consensus 372 ~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~ 451 (811)
++.|+.|++||+.+++ .+..+.+|...|.++.|+ +..+++++.|+.|++||+.++..+... .+|...
T Consensus 175 -~~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~-------~~~~~~ 241 (445)
T 2ovr_B 175 -GSTDRTLKVWNAETGE---CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-------MGHVAA 241 (445)
T ss_dssp -EETTSCEEEEETTTTE---EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEE-------ECCSSC
T ss_pred -EeCCCeEEEEECCcCc---EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEE-------cCCccc
Confidence 7899999999999998 899999999999999997 466777788999999999977666554 457778
Q ss_pred EEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceee
Q psy9770 452 VTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ 530 (811)
Q Consensus 452 v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~ 530 (811)
+.+++| ++. +++|+.||.|++||+.+++.+..+. .|...|.++.| ++.++++++.||.|++||+.+...
T Consensus 242 v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~----- 311 (445)
T 2ovr_B 242 VRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNC----- 311 (445)
T ss_dssp EEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEEC-CCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCE-----
T ss_pred EEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEec-CCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCE-----
Confidence 999999 444 7799999999999999999999888 89999999999 788999999999999999986654
Q ss_pred eccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEE
Q psy9770 531 IAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVV 610 (811)
Q Consensus 531 ~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~ 610 (811)
...+.+|...+.++.++ ++++++++.||.|++||+.+++.+
T Consensus 312 -------------------------------------~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~ 352 (445)
T 2ovr_B 312 -------------------------------------IHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCL 352 (445)
T ss_dssp -------------------------------------EEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEE
T ss_pred -------------------------------------EEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEE
Confidence 11233566777777774 679999999999999999999988
Q ss_pred EEec----CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEe-----cCCCCCeEEEEEccCCCEEEEEecCCc
Q psy9770 611 WSKD----IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIH-----TDGNEPIQVVKFSPDGKLLALGSRDNY 681 (811)
Q Consensus 611 ~~~~----~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~-----~~~~~~i~~i~~spdg~~lasgs~dg~ 681 (811)
..+. +...|.+++|+ +.+|++|+.||.|++||+.+++.+..+ ..+...|.+++|+|++.+||+|+.||.
T Consensus 353 ~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 353 QTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred EEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 8764 67789999995 679999999999999999999988887 467889999999999999999999998
Q ss_pred ----EEEEEecCC
Q psy9770 682 ----IYVYEVSGD 690 (811)
Q Consensus 682 ----I~iwd~~~~ 690 (811)
|.|||+...
T Consensus 431 ~~~~l~v~df~~~ 443 (445)
T 2ovr_B 431 EETKLLVLDFDVD 443 (445)
T ss_dssp SCCEEEEEECCCC
T ss_pred CccEEEEEECCCC
Confidence 999999864
No 51
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-35 Score=317.10 Aligned_cols=301 Identities=19% Similarity=0.238 Sum_probs=261.9
Q ss_pred EEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEe
Q psy9770 293 RHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVD 372 (811)
Q Consensus 293 ~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~ 372 (811)
..+.+|...|++++|+|++++||+|+.+| .|+|||+.+++.+..+. +|...|.+++|+| ++++|++
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg--------~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~--~~~~l~s-- 91 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDS--------SASVWYSLNGERLGTLD--GHTGTIWSIDVDC--FTKYCVT-- 91 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSS--------CEEEEETTTCCEEEEEC--CCSSCEEEEEECT--TSSEEEE--
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCC--------EEEEEeCCCchhhhhhh--hcCCcEEEEEEcC--CCCEEEE--
Confidence 56889999999999999999999999999 99999999999999987 8999999999999 8999998
Q ss_pred CCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECC-----CcEEEEEEcCCceeeeecccccccCC
Q psy9770 373 EGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGK-----SHINFWTIDAGGTLYKKQGIFEMIRD 447 (811)
Q Consensus 373 ~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~l~~ 447 (811)
++.|+.|++||+.+++ .+..+. +...|.+++|+|++..+++++.+ +.|++|++..+......
T Consensus 92 ~~~dg~i~iwd~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~--------- 158 (369)
T 3zwl_B 92 GSADYSIKLWDVSNGQ---CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHEL--------- 158 (369)
T ss_dssp EETTTEEEEEETTTCC---EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCE---------
T ss_pred EeCCCeEEEEECCCCc---EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceee---------
Confidence 6889999999999998 777777 88999999999998888888888 99999999843322110
Q ss_pred CCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeeccccc--ceEEEEEecCCcEEEEecCCCcEEEEeCCCCCc
Q psy9770 448 KPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEG--SVFSICVLKEGSIISAGGKDGRLLQFDSNLQPT 525 (811)
Q Consensus 448 ~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~--~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~ 525 (811)
. .. .......+. .|.+ .+.+++|++++++|++++.||.|++||+.....
T Consensus 159 -----~-----------~~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 209 (369)
T 3zwl_B 159 -----T-----------KV------------SEEPIHKII-THEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYE 209 (369)
T ss_dssp -----E-----------EE------------CSSCSEEEE-CCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTE
T ss_pred -----c-----------cc------------ccceeeecc-CCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcE
Confidence 0 00 011112222 4555 899999999999999999999999999876321
Q ss_pred cceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCC
Q psy9770 526 GYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSM 605 (811)
Q Consensus 526 ~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~ 605 (811)
....+..|...|.+++|+|++.+|++++.|+.|++||+.
T Consensus 210 -----------------------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 210 -----------------------------------------YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp -----------------------------------------EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred -----------------------------------------eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 012345688899999999999999999999999999999
Q ss_pred CCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCC--------------eEEEEecCCcceeEEecCCCCCeEEEEEccCCC
Q psy9770 606 SHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAG--------------RWLVMDSETREAYSIHTDGNEPIQVVKFSPDGK 671 (811)
Q Consensus 606 ~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg--------------~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~ 671 (811)
+++.+..+.+...+.+++|+|+++++++++.++ .+++||..+++.+..+.+|...|++++|+|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~ 328 (369)
T 3zwl_B 249 TLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGT 328 (369)
T ss_dssp TCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred CCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCC
Confidence 999999988999999999999999999999988 899999999999999999999999999999999
Q ss_pred EEEEEecCCcEEEEEecCC
Q psy9770 672 LLALGSRDNYIYVYEVSGD 690 (811)
Q Consensus 672 ~lasgs~dg~I~iwd~~~~ 690 (811)
+|++++.||.|+||++..+
T Consensus 329 ~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 329 SYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEEETTSEEEEEEECHH
T ss_pred EEEEEcCCCeEEEEECccc
Confidence 9999999999999999874
No 52
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-36 Score=339.31 Aligned_cols=352 Identities=11% Similarity=0.159 Sum_probs=272.6
Q ss_pred EEccCCcEEEEeccEEEEEeCCCCceEEe-ccCCCCeEEEEEcC-CCcEEEEeeccCCCCCCCCCeEEEEeCCC---Cc-
Q psy9770 267 YLLPTGEIVYFVAAVAVLYNVEEQTQRHY-LGHTDDIKCLSIHP-NKLLIATGQVAGHDAREGKPHIRIWNSVS---LF- 340 (811)
Q Consensus 267 ~~spdg~~l~~~~~~i~i~d~~~~~~~~~-~~h~~~V~~la~sp-dg~~Lasg~~dg~~~~~~~~~I~iWd~~t---~~- 340 (811)
.|+|+++.++... .|+........+ .+|.+.|.+++|+| ++++||+|+.|| .|+|||+.+ +.
T Consensus 34 ~f~~~~~~~~~~~----~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg--------~v~vwd~~~~~~~~~ 101 (437)
T 3gre_A 34 EFGPIQEIVRSPN----MGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQG--------VIKIWNLKEIIVGEV 101 (437)
T ss_dssp GGCCCCCCCCCCC----GGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTS--------EEEEEEHHHHHTTCC
T ss_pred hcCCccccccccc----cccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCc--------eEEEeECcccccCcc
Confidence 4567777776554 588777777777 88999999999999 999999999999 999999876 43
Q ss_pred --EEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcc---cCCCcceEEEeeeCCCcEEEEEecCCCCCe
Q psy9770 341 --TVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQ---KSDRGHKITETKCSVDTVVAAEFHPLDRNN 415 (811)
Q Consensus 341 --~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~---~~~~~~~~~~~~~~~~~V~~v~fsp~~~~l 415 (811)
....+ .|...|.+++|+| ++.+|++ ++.|+.|++||+. +++ .+.....| .+..+.|+|++
T Consensus 102 ~~~~~~~---~h~~~v~~~~~~~--~~~~l~s--~s~dg~i~vwd~~~~~~~~---~~~~~~~~--~i~~~~~~~~~--- 166 (437)
T 3gre_A 102 YSSSLTY---DCSSTVTQITMIP--NFDAFAV--SSKDGQIIVLKVNHYQQES---EVKFLNCE--CIRKINLKNFG--- 166 (437)
T ss_dssp CSCSEEE---ECSSCEEEEEECT--TSSEEEE--EETTSEEEEEEEEEEEETT---EEEEEEEE--EEEEEEGGGGS---
T ss_pred cceeeec---cCCCCEEEEEEeC--CCCEEEE--EeCCCEEEEEEeccccCCc---eeeccccc--eeEEEEccCcc---
Confidence 23332 5899999999999 8999998 7899999999995 555 66666655 67777777632
Q ss_pred EEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEE--EcCCCc-EEEEcCCCcEEEEecCCceEEEEeecc--c
Q psy9770 416 IVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLA--FTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNV--H 490 (811)
Q Consensus 416 l~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~--~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~--h 490 (811)
+...+.++. +++++. +++++.||.|++||+.+++.+..+. . |
T Consensus 167 --------------------------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~h 213 (437)
T 3gre_A 167 --------------------------------KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE-NSPR 213 (437)
T ss_dssp --------------------------------SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEE-CCGG
T ss_pred --------------------------------cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc-cCCC
Confidence 123355666 567887 5699999999999999999999888 5 8
Q ss_pred ccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceee
Q psy9770 491 EGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPV 570 (811)
Q Consensus 491 ~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~ 570 (811)
.+.|.+++|+|++++|++|+.||.|++||++.... ...+
T Consensus 214 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~--------------------------------------- 252 (437)
T 3gre_A 214 HGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVL--IRSW--------------------------------------- 252 (437)
T ss_dssp GCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE--EEEE---------------------------------------
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccE--EEEE---------------------------------------
Confidence 99999999999999999999999999999986544 0100
Q ss_pred eeecccceEEEEEC----CCCCeEEEEECCCeEEEEeCCCCcEEEEec---------------------------CCCCe
Q psy9770 571 VLGHTDELWALAAH----PSLSQFLTAGFDRIVQLWDSMSHSVVWSKD---------------------------IAEQA 619 (811)
Q Consensus 571 ~~~h~~~v~~l~~s----p~~~~l~s~s~dg~v~iwd~~~~~~~~~~~---------------------------~~~~v 619 (811)
...|...|.+++++ |++.+|++++.|+.|++||+.+++++..+. +...|
T Consensus 253 ~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 332 (437)
T 3gre_A 253 SFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNAL 332 (437)
T ss_dssp BCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGG
T ss_pred ecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCce
Confidence 01455677888554 567799999999999999999988776643 44558
Q ss_pred EEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCC---CCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeE
Q psy9770 620 QSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGN---EPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSR 696 (811)
Q Consensus 620 ~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~---~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~ 696 (811)
.+++|+ ++++|++|+.||.|++||+.+++....+.+|. ..+....++++..+++.. |+.... ..
T Consensus 333 ~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~----~~ 399 (437)
T 3gre_A 333 STISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTST----HS 399 (437)
T ss_dssp CCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE--------CC----------
T ss_pred EEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe--------cccccc----cc
Confidence 899999 78999999999999999999999888887753 345566666666555544 211111 22
Q ss_pred EEEecCCCCCeeEEEeCCC--CCeEEEecCCceEEEEE
Q psy9770 697 VGRCTGHSSFITHLDWSED--SMYIRSNSGDYELLYWN 732 (811)
Q Consensus 697 ~~~~~~h~~~V~~l~~spd--g~~L~s~s~Dg~i~iWd 732 (811)
......|...|++++|+++ +.+|++++.||.|++|+
T Consensus 400 ~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 400 VDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 2345679999999999998 78999999999999995
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.3e-35 Score=329.20 Aligned_cols=327 Identities=17% Similarity=0.259 Sum_probs=273.1
Q ss_pred eEEeccCCCCe-EEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEE
Q psy9770 292 QRHYLGHTDDI-KCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCA 370 (811)
Q Consensus 292 ~~~~~~h~~~V-~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Las 370 (811)
...+.+|...| .|+.| ++.+||+|+.|| .|++||+.+++.+..+. +|...|.+++|++ ++ +|++
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg--------~i~vwd~~~~~~~~~~~--~h~~~V~~l~~~~--~~-~l~s 178 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDK--------MIRVYDSINKKFLLQLS--GHDGGVWALKYAH--GG-ILVS 178 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTS--------CEEEEETTTTEEEEEEC--CCSSCEEEEEECS--TT-EEEE
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCC--------cEEEEECCCCcEEEEEe--CCCcCEEEEEEcC--CC-EEEE
Confidence 35678998775 66666 567999999999 99999999999999987 9999999999998 56 7776
Q ss_pred EeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecC--CCCCeEEEECCCcEEEEEEcCCceeeeecc--------
Q psy9770 371 VDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHP--LDRNNIVTCGKSHINFWTIDAGGTLYKKQG-------- 440 (811)
Q Consensus 371 v~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp--~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~-------- 440 (811)
++.|++|++||+++++ ++..+.+|...|.+++|++ ++..+++++.|+.|++|++.++........
T Consensus 179 --~s~dg~i~vwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 179 --GSTDRTVRVWDIKKGC---CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp --EETTSCEEEEETTTTE---EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred --EeCCCCEEEEECCCCc---EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence 7899999999999998 8999999999999999995 556677777799999999986553322100
Q ss_pred --------cccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecC
Q psy9770 441 --------IFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK 511 (811)
Q Consensus 441 --------~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~ 511 (811)
....+.+|...+.++. +++. +++|+.||.|++||+.+++.+..+. +|...|.+++|++++++|++|+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~ 330 (464)
T 3v7d_B 254 HTPEENPYFVGVLRGHMASVRTVS--GHGNIVVSGSYDNTLIVWDVAQMKCLYILS-GHTDRIYSTIYDHERKRCISASM 330 (464)
T ss_dssp SCGGGCTTEEEEECCCSSCEEEEE--EETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEETTTTEEEEEET
T ss_pred eccCCCeEEEEEccCccceEEEEc--CCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 0122356777788874 5566 6699999999999999999999888 89999999999999999999999
Q ss_pred CCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEE
Q psy9770 512 DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFL 591 (811)
Q Consensus 512 dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~ 591 (811)
||.|++||+.++.. ...+.+|...|.+++++ +.+|+
T Consensus 331 dg~i~vwd~~~~~~------------------------------------------~~~~~~h~~~v~~~~~~--~~~l~ 366 (464)
T 3v7d_B 331 DTTIRIWDLENGEL------------------------------------------MYTLQGHTALVGLLRLS--DKFLV 366 (464)
T ss_dssp TSCEEEEETTTTEE------------------------------------------EEEECCCSSCEEEEEEC--SSEEE
T ss_pred CCcEEEEECCCCcE------------------------------------------EEEEeCCCCcEEEEEEc--CCEEE
Confidence 99999999976544 12345688889999997 57999
Q ss_pred EEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEE-ecCCCCCeEEEEEccCC
Q psy9770 592 TAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI-HTDGNEPIQVVKFSPDG 670 (811)
Q Consensus 592 s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~i~~spdg 670 (811)
+++.||.|++||+.++.......+...+..++|+|++.+|++|+ ||.|++||+.+++.+.. +..|...|.+++|+ +.
T Consensus 367 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~ 444 (464)
T 3v7d_B 367 SAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GK 444 (464)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TT
T ss_pred EEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CC
Confidence 99999999999999998888888888899999999999999988 89999999999999875 66788999999997 44
Q ss_pred CEEEEEecCCcEEEEEe
Q psy9770 671 KLLALGSRDNYIYVYEV 687 (811)
Q Consensus 671 ~~lasgs~dg~I~iwd~ 687 (811)
.++++++.||.+.+|-+
T Consensus 445 ~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 445 TLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp EEEEEEEETTEEEEEEE
T ss_pred EEEEEEEeCCeEEEEEe
Confidence 55666667776665544
No 54
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-35 Score=316.09 Aligned_cols=297 Identities=15% Similarity=0.188 Sum_probs=234.0
Q ss_pred eEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCC--cEEEEeccCCccccEEEEEEecCCCCcEEE
Q psy9770 292 QRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSL--FTVSIIGIGEFERSISCLSFSKADGGTFLC 369 (811)
Q Consensus 292 ~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~--~~~~~l~~~~h~~~V~~l~fs~~~dg~~La 369 (811)
.+.+.+|...|.+++|+|+ +||+|+.|+ .|+|||+.++ +.+..+...+|...|.+++|+| +|++|+
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~--------~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp--~~~~la 74 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDR--------KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP--HTSLLA 74 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSS--------CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT--TSSEEE
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCC--------EEEEEEecCCCeEEEEEEecCCccCCEEEEEECC--CCCEEE
Confidence 3567899999999999998 999999999 9999999875 4555553234999999999999 899999
Q ss_pred EEeCCCCceEEEEEcccCC----CcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeeccccccc
Q psy9770 370 AVDEGNDYNISVWDWQKSD----RGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMI 445 (811)
Q Consensus 370 sv~~s~d~~i~vWd~~~~~----~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l 445 (811)
+ ++.|++|+|||+.... ....+..+.+|...|.+++|+|++..+++++.|+.|++||+......... ...+
T Consensus 75 s--~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~---~~~~ 149 (330)
T 2hes_X 75 A--GSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYEC---ISVL 149 (330)
T ss_dssp E--EETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEE---EEEE
T ss_pred E--EeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEE---EEEe
Confidence 8 7899999999986432 12257788999999999999998888888888999999999533211111 1122
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCc--eEEEEeecccccceEEEEEecC--CcEEEEecCCCcEEEEeC
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSN--TISKFIRNVHEGSVFSICVLKE--GSIISAGGKDGRLLQFDS 520 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~--~~~~~~~~~h~~~V~~l~~s~d--g~~l~s~s~dg~I~~wd~ 520 (811)
.+|...|.+++|+|++. +++++.||.|++||..++ +++..+. +|.+.|.+++|+|+ +.+|++++.|++|++||+
T Consensus 150 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 150 QEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKY 228 (330)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEe
Confidence 56888999999999998 569999999999998765 5667777 89999999999998 778999999999999998
Q ss_pred CCCCc------cceeeecc-ccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCce----eeeeeccc-ceEEEEECC--C
Q psy9770 521 NLQPT------GYEAQIAE-HLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFS----PVVLGHTD-ELWALAAHP--S 586 (811)
Q Consensus 521 ~~~~~------~~~~~~~~-~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~----~~~~~h~~-~v~~l~~sp--~ 586 (811)
..... .....+.. |...|.++++++++.+++++.++.|++|+...+.. ....+|.. .|.+++|+| +
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~ 308 (330)
T 2hes_X 229 MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNG 308 (330)
T ss_dssp EEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC----
T ss_pred cCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCC
Confidence 65421 11223333 78899999999999999999999999999877531 22356877 899999999 6
Q ss_pred CCeEEEEECCCeEEEEeCCC
Q psy9770 587 LSQFLTAGFDRIVQLWDSMS 606 (811)
Q Consensus 587 ~~~l~s~s~dg~v~iwd~~~ 606 (811)
+++|++++.||+|++||+..
T Consensus 309 ~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 309 KTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp -CCEEEEETTSEEEEEEC--
T ss_pred ceEEEEecCCCcEEEEEecc
Confidence 88999999999999999864
No 55
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=318.48 Aligned_cols=301 Identities=17% Similarity=0.231 Sum_probs=248.4
Q ss_pred EEeeeCCCcEEEEEecCCCCCeEEEEC----CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCC---Cc-EEE
Q psy9770 394 TETKCSVDTVVAAEFHPLDRNNIVTCG----KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQG---GE-VLS 465 (811)
Q Consensus 394 ~~~~~~~~~V~~v~fsp~~~~ll~~~~----d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~---g~-lls 465 (811)
..+.+|...|.+++|+|++..++++++ |+.|++|++.++....... .+|...|.+++|+|+ +. +++
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLRE------IEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEE------EEESSCEEEEECTTCCTTTCCEEE
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceee------ecccCcEEEEEEcCCCCCCceEEE
Confidence 445779999999999998888877773 7999999999665443221 346678999999998 45 779
Q ss_pred EcCCCcEEEEecCCce-EEEEeecccccceEEEEE------ecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCe
Q psy9770 466 GDSNGNIIVWTRGSNT-ISKFIRNVHEGSVFSICV------LKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGI 538 (811)
Q Consensus 466 g~~dg~I~vwd~~~~~-~~~~~~~~h~~~V~~l~~------s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v 538 (811)
|+.||.|++||+.+++ ....+. .|...|.++.| ++++++|++++.||.|++||+..... ....+..+.+
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~-- 161 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD-PVANMEPVQG-- 161 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS-CSEEECCCTT--
T ss_pred ecCCCeEEEEeCCCCCccEEEEE-ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC-cceeccccCC--
Confidence 9999999999999887 777777 89999999955 67899999999999999999987652 1111111110
Q ss_pred EEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEE----ECCCCCeEEEEECCCeEEEEeCCCCcEEEEec
Q psy9770 539 RTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALA----AHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKD 614 (811)
Q Consensus 539 ~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~----~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 614 (811)
.+...+.+++ |+|++.+|++++.|+.|++||+.+++......
T Consensus 162 ----------------------------------~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 207 (357)
T 3i2n_A 162 ----------------------------------ENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN 207 (357)
T ss_dssp ----------------------------------SCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ----------------------------------CCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC
Confidence 1123566776 78999999999999999999999999888888
Q ss_pred CCCCeEEEEEcC---CCCEEEEEEeCCeEEEEecCCcceeEEec-----CCCCCeEEEEEccCCC-EEEEEecCCcEEEE
Q psy9770 615 IAEQAQSATFSP---DGSIIIVGCIAGRWLVMDSETREAYSIHT-----DGNEPIQVVKFSPDGK-LLALGSRDNYIYVY 685 (811)
Q Consensus 615 ~~~~v~~~~~sp---dg~~la~g~~dg~i~i~d~~~~~~~~~~~-----~~~~~i~~i~~spdg~-~lasgs~dg~I~iw 685 (811)
+...+.+++|+| ++.+|++++.||.|++||+.+++....+. .|...|.+++|+|+++ +|++++.||.|++|
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 287 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLW 287 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEe
Confidence 899999999999 99999999999999999999877655544 8999999999999998 89999999999999
Q ss_pred EecCCCcc---------------eeEEEEecCCCCCeeEEEeCCCCCeEE-EecCCceEEEEECCCCcc
Q psy9770 686 EVSGDSRK---------------YSRVGRCTGHSSFITHLDWSEDSMYIR-SNSGDYELLYWNAGTCRQ 738 (811)
Q Consensus 686 d~~~~~~~---------------~~~~~~~~~h~~~V~~l~~spdg~~L~-s~s~Dg~i~iWd~~~~~~ 738 (811)
|+..+... ...+..+.+|...|++++|+|++++|+ +++.||.|++||+.+.+.
T Consensus 288 d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 288 KYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 99875432 256778899999999999999999998 899999999999987654
No 56
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.5e-35 Score=312.34 Aligned_cols=289 Identities=16% Similarity=0.221 Sum_probs=247.9
Q ss_pred EEeccCCCCeEEEEEcCC-CcEEEEeeccCCCCCCCCCeEEEEeCCCCc-----EEEEeccCCccccEEEEEEecCCCCc
Q psy9770 293 RHYLGHTDDIKCLSIHPN-KLLIATGQVAGHDAREGKPHIRIWNSVSLF-----TVSIIGIGEFERSISCLSFSKADGGT 366 (811)
Q Consensus 293 ~~~~~h~~~V~~la~spd-g~~Lasg~~dg~~~~~~~~~I~iWd~~t~~-----~~~~l~~~~h~~~V~~l~fs~~~dg~ 366 (811)
..|.||.+.|++|+|+|+ +++||||+.|+ +|+|||+.+.+ +...+. +|...|.+++|+| +|+
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~--------~i~vWd~~~~~~~~~~~~~~l~--~h~~~V~~~~~s~--dg~ 99 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDK--------TIIMWKLTRDETNYGIPQRALR--GHSHFVSDVVISS--DGQ 99 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTS--------CEEEEEECCSSSCSEEEEEEEC--CCSSCEEEEEECT--TSS
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCC--------eEEEEECCCCCcccceeeEEEe--CCCCCEEEEEECC--CCC
Confidence 358899999999999998 68999999999 99999987654 455555 9999999999999 899
Q ss_pred EEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccC
Q psy9770 367 FLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIR 446 (811)
Q Consensus 367 ~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~ 446 (811)
+|++ ++.|+.|++|+..... .......+...+..+.+++++..+++++.|+.+++|++......... ..
T Consensus 100 ~l~s--~~~d~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~------~~ 168 (340)
T 4aow_A 100 FALS--GSWDGTLRLWDLTTGT---TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQ------DE 168 (340)
T ss_dssp EEEE--EETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC------SS
T ss_pred EEEE--EcccccceEEeecccc---eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEE------ec
Confidence 9998 7899999999999888 88888889999999999999988888888999999998743332211 15
Q ss_pred CCCceEEEEEEcCCCc---EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCC
Q psy9770 447 DKPKYVTCLAFTQGGE---VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQ 523 (811)
Q Consensus 447 ~~~~~v~~l~~s~~g~---llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~ 523 (811)
+|...+.+++|++++. +++++.|+.|++||+.+++....+. +|.+.|.+++|+|++++|++|+.||.|++||+...
T Consensus 169 ~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~ 247 (340)
T 4aow_A 169 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 247 (340)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred cccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC
Confidence 6778899999998864 5689999999999999999999888 89999999999999999999999999999999876
Q ss_pred CccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCcee----------eeeecccceEEEEECCCCCeEEEE
Q psy9770 524 PTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSP----------VVLGHTDELWALAAHPSLSQFLTA 593 (811)
Q Consensus 524 ~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~----------~~~~h~~~v~~l~~sp~~~~l~s~ 593 (811)
.. ... ..+...+..+.+++++.+++++.++.|++||++..... ...+|...|.+++|+|++++|++|
T Consensus 248 ~~--~~~-~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 324 (340)
T 4aow_A 248 KH--LYT-LDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 324 (340)
T ss_dssp EE--EEE-EECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEE
T ss_pred ce--eee-ecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEE
Confidence 65 222 23456799999999999999999999999999875221 234788999999999999999999
Q ss_pred ECCCeEEEEeCCCCc
Q psy9770 594 GFDRIVQLWDSMSHS 608 (811)
Q Consensus 594 s~dg~v~iwd~~~~~ 608 (811)
+.||.|+|||+.+|.
T Consensus 325 s~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 325 YTDNLVRVWQVTIGT 339 (340)
T ss_dssp ETTSCEEEEEEEC--
T ss_pred eCCCEEEEEeCCCcC
Confidence 999999999998875
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.6e-35 Score=323.53 Aligned_cols=321 Identities=17% Similarity=0.161 Sum_probs=269.7
Q ss_pred ccceEEccCCcEEEEec--cEEEEEeCCCCceEE-eccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCC
Q psy9770 263 RSNLYLLPTGEIVYFVA--AVAVLYNVEEQTQRH-YLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSL 339 (811)
Q Consensus 263 ~~~l~~spdg~~l~~~~--~~i~i~d~~~~~~~~-~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~ 339 (811)
...++|+|+|+++++++ +.|.+||+.++.... +..| ..+.+.+|+|++++||+|+.+| .|+|||+.++
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg--------~i~iwd~~~~ 129 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEG--------DIKVLDSNFN 129 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTS--------CEEEECTTSC
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCC--------CEEEEeCCCc
Confidence 45799999999888774 799999998875433 3344 5556668899999999999999 9999999999
Q ss_pred cEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEE
Q psy9770 340 FTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTC 419 (811)
Q Consensus 340 ~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~ 419 (811)
+.+..+. +|...|.+++|+| ++++|++ ++.|+.|++||+.+++ .+..+.+|...|.+++|+|++..+++++
T Consensus 130 ~~~~~~~--~h~~~v~~~~~~~--~~~~l~s--~s~d~~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 200 (420)
T 3vl1_A 130 LQREIDQ--AHVSEITKLKFFP--SGEALIS--SSQDMQLKIWSVKDGS---NPRTLIGHRATVTDIAIIDRGRNVLSAS 200 (420)
T ss_dssp EEEEETT--SSSSCEEEEEECT--TSSEEEE--EETTSEEEEEETTTCC---CCEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred ceeeecc--cccCccEEEEECC--CCCEEEE--EeCCCeEEEEeCCCCc---CceEEcCCCCcEEEEEEcCCCCEEEEEc
Confidence 9988876 8999999999999 8999998 7899999999999998 8889999999999999999888888888
Q ss_pred CCCcEEEEEEcCCceeeeecccccccCCCCceEE---------------------EEEEcCCCc-EEEEcCCCcEEEEec
Q psy9770 420 GKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVT---------------------CLAFTQGGE-VLSGDSNGNIIVWTR 477 (811)
Q Consensus 420 ~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~---------------------~l~~s~~g~-llsg~~dg~I~vwd~ 477 (811)
.|+.|++||+.++..+...... ..+...+. +++|+|++. +++|+.||.|++||+
T Consensus 201 ~d~~v~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 276 (420)
T 3vl1_A 201 LDGTIRLWECGTGTTIHTFNRK----ENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNV 276 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECBT----TBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEET
T ss_pred CCCcEEEeECCCCceeEEeecC----CCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEEC
Confidence 8999999999977766554322 12333344 445578888 569999999999999
Q ss_pred CCceEEEEeecccccceEEEEEecCCc-EEEEecCCCcEEEEeCCCCCccceeeecc-ccCCeEEEeeCCCCeEEEEeCC
Q psy9770 478 GSNTISKFIRNVHEGSVFSICVLKEGS-IISAGGKDGRLLQFDSNLQPTGYEAQIAE-HLGGIRTVSEGRGSQLIVGTTR 555 (811)
Q Consensus 478 ~~~~~~~~~~~~h~~~V~~l~~s~dg~-~l~s~s~dg~I~~wd~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~l~~~~~~ 555 (811)
.+++....+...|...|.+++|+|++. +|++++.||.|++||+..... ....+.. +...+.++.+.++..+++++.+
T Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d 355 (420)
T 3vl1_A 277 FSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC-PVGEFLINEGTPINNVYFAAGALFVSSGFD 355 (420)
T ss_dssp TTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSEEEEESTTSCEEEEEEETTEEEEEETTT
T ss_pred CCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC-chhhhhccCCCCceEEEeCCCCEEEEecCC
Confidence 999888777757899999999999998 999999999999999987654 2344444 6778889988877788899999
Q ss_pred CeEEEEEccCC----------ceeeeeecccceEEEEECCCCC---eEEEEECCCeEEEEeCCC
Q psy9770 556 NCILVGSLNLG----------FSPVVLGHTDELWALAAHPSLS---QFLTAGFDRIVQLWDSMS 606 (811)
Q Consensus 556 ~~i~~~d~~~~----------~~~~~~~h~~~v~~l~~sp~~~---~l~s~s~dg~v~iwd~~~ 606 (811)
+.|++|++... ....+..|...|.+++|+|++. .+++++.+|.+.+|++..
T Consensus 356 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 356 TSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 99999998762 2335668889999999999999 788888999999999864
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.4e-34 Score=323.17 Aligned_cols=322 Identities=14% Similarity=0.272 Sum_probs=272.4
Q ss_pred CCcEEEEeccCCccccE-EEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeE
Q psy9770 338 SLFTVSIIGIGEFERSI-SCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNI 416 (811)
Q Consensus 338 t~~~~~~l~~~~h~~~V-~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll 416 (811)
..+....+. +|...| .++ ++ +|++|++ ++.|+.|++||+.+++ .+..+.+|.+.|.+++|+ +..++
T Consensus 107 ~~~~~~~l~--~h~~~v~~~~--~~--~g~~l~s--g~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~--~~~l~ 173 (445)
T 2ovr_B 107 ELKSPKVLK--GHDDHVITCL--QF--CGNRIVS--GSDDNTLKVWSAVTGK---CLRTLVGHTGGVWSSQMR--DNIII 173 (445)
T ss_dssp CCCCCEEEE--CSTTSCEEEE--EE--ETTEEEE--EETTSCEEEEETTTCC---EEEECCCCSSCEEEEEEE--TTEEE
T ss_pred CcceeEEec--ccCCCcEEEE--EE--cCCEEEE--EECCCcEEEEECCCCc---EEEEEcCCCCCEEEEEec--CCEEE
Confidence 334445555 888765 554 44 5689988 7899999999999998 899999999999999998 45677
Q ss_pred EEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEE
Q psy9770 417 VTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFS 496 (811)
Q Consensus 417 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~ 496 (811)
+++.|+.|++||+.+++.+... .+|...|.+++|++ ..+++|+.||.|++||+.+++....+. .|...|.+
T Consensus 174 s~~~dg~i~vwd~~~~~~~~~~-------~~h~~~v~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~-~~~~~v~~ 244 (445)
T 2ovr_B 174 SGSTDRTLKVWNAETGECIHTL-------YGHTSTVRCMHLHE-KRVVSGSRDATLRVWDIETGQCLHVLM-GHVAAVRC 244 (445)
T ss_dssp EEETTSCEEEEETTTTEEEEEE-------CCCSSCEEEEEEET-TEEEEEETTSEEEEEESSSCCEEEEEE-CCSSCEEE
T ss_pred EEeCCCeEEEEECCcCcEEEEE-------CCCCCcEEEEEecC-CEEEEEeCCCEEEEEECCCCcEEEEEc-CCcccEEE
Confidence 7777999999999977665544 56778899999964 347899999999999999999998888 89999999
Q ss_pred EEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeeccc
Q psy9770 497 ICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTD 576 (811)
Q Consensus 497 l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~ 576 (811)
+.| ++.+|++++.||.|++||+..... ...+.+|..
T Consensus 245 ~~~--~~~~l~~~~~dg~i~iwd~~~~~~------------------------------------------~~~~~~~~~ 280 (445)
T 2ovr_B 245 VQY--DGRRVVSGAYDFMVKVWDPETETC------------------------------------------LHTLQGHTN 280 (445)
T ss_dssp EEE--CSSCEEEEETTSCEEEEEGGGTEE------------------------------------------EEEECCCSS
T ss_pred EEE--CCCEEEEEcCCCEEEEEECCCCcE------------------------------------------eEEecCCCC
Confidence 999 788999999999999999875443 122346788
Q ss_pred ceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEec
Q psy9770 577 ELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHT 655 (811)
Q Consensus 577 ~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~ 655 (811)
.|.+++| ++.++++++.|+.|++||+.+++.+..+ .+...+.++.+ ++.+|++|+.||.|++||+.+++.+..+.
T Consensus 281 ~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 281 RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp CEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred ceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 8999998 7889999999999999999999988775 46677777776 56799999999999999999999998887
Q ss_pred C---CCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEe-----cCCCCCeeEEEeCCCCCeEEEecCCce
Q psy9770 656 D---GNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRC-----TGHSSFITHLDWSEDSMYIRSNSGDYE 727 (811)
Q Consensus 656 ~---~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~-----~~h~~~V~~l~~spdg~~L~s~s~Dg~ 727 (811)
. |...|.+++|+ +++|++|+.||.|++||+.++. .+..+ .+|.+.|++++|+|++.+|++++.||+
T Consensus 357 ~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 357 GPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE----FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp STTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC----EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred cCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc----eeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 6 78899999994 6899999999999999999873 33344 478899999999999999999999997
Q ss_pred ----EEEEECCC
Q psy9770 728 ----LLYWNAGT 735 (811)
Q Consensus 728 ----i~iWd~~~ 735 (811)
|.+||+..
T Consensus 431 ~~~~l~v~df~~ 442 (445)
T 2ovr_B 431 EETKLLVLDFDV 442 (445)
T ss_dssp SCCEEEEEECCC
T ss_pred CccEEEEEECCC
Confidence 99999875
No 59
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.6e-34 Score=321.65 Aligned_cols=345 Identities=16% Similarity=0.198 Sum_probs=275.4
Q ss_pred eEEEeeeCCCcE-EEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCC
Q psy9770 392 KITETKCSVDTV-VAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNG 470 (811)
Q Consensus 392 ~~~~~~~~~~~V-~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg 470 (811)
....+.+|...+ .++.|. ++.+++++.|+.|++||+.+++.+... .+|...|.+++|++++.+++|+.||
T Consensus 113 ~~~~l~~h~~~v~~~~~~~--~~~l~sgs~dg~i~vwd~~~~~~~~~~-------~~h~~~V~~l~~~~~~~l~s~s~dg 183 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFE--DNYVITGADDKMIRVYDSINKKFLLQL-------SGHDGGVWALKYAHGGILVSGSTDR 183 (464)
T ss_dssp EEEEEECCSSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEE-------CCCSSCEEEEEECSTTEEEEEETTS
T ss_pred ceEEEcCCCCCcEEEEEEC--CCEEEEEcCCCcEEEEECCCCcEEEEE-------eCCCcCEEEEEEcCCCEEEEEeCCC
Confidence 567788998875 666664 567777778999999999977666554 5688899999999999888999999
Q ss_pred cEEEEecCCceEEEEeecccccceEEEEEe--cCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCe
Q psy9770 471 NIIVWTRGSNTISKFIRNVHEGSVFSICVL--KEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQ 548 (811)
Q Consensus 471 ~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s--~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 548 (811)
.|++||+.+++....+. +|...|.+++|+ +++.+|++++.||.|++||+............ . ....+...+..
T Consensus 184 ~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~-~--~~~~~~~~~~~- 258 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE-H--DYPLVFHTPEE- 258 (464)
T ss_dssp CEEEEETTTTEEEEEEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC-------C--CSSEEESCGGG-
T ss_pred CEEEEECCCCcEEEEEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccccc-C--CcceEeeccCC-
Confidence 99999999999999888 899999999999 57899999999999999999876541111110 0 01111111110
Q ss_pred EEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe-cCCCCeEEEEEcCC
Q psy9770 549 LIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK-DIAEQAQSATFSPD 627 (811)
Q Consensus 549 l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~-~~~~~v~~~~~spd 627 (811)
.......+.+|...+.++ +++++++++++.|+.|++||+.+++.+..+ .+...+.+++|+|+
T Consensus 259 ---------------~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (464)
T 3v7d_B 259 ---------------NPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHE 321 (464)
T ss_dssp ---------------CTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred ---------------CeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCC
Confidence 001233566788888887 467899999999999999999999988875 47889999999999
Q ss_pred CCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCe
Q psy9770 628 GSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFI 707 (811)
Q Consensus 628 g~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V 707 (811)
+++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ +.+|++++.||.|++||+.++... ... .|...+
T Consensus 322 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~----~~~-~~~~~~ 394 (464)
T 3v7d_B 322 RKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK----FSY-HHTNLS 394 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE----EEE-ECTTCC
T ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCcee----eee-cCCCCc
Confidence 9999999999999999999999999999999999999996 679999999999999999986422 222 366778
Q ss_pred eEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEE
Q psy9770 708 THLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIA 787 (811)
Q Consensus 708 ~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~La 787 (811)
..++|++++++|++++ ||.|++||+.+++.+.... ..|...|.+++|+ +..+++
T Consensus 395 ~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~------------------------~~~~~~v~~v~~~-~~~l~~ 448 (464)
T 3v7d_B 395 AITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANI------------------------LKDADQIWSVNFK-GKTLVA 448 (464)
T ss_dssp CEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCT------------------------TTTCSEEEEEEEE-TTEEEE
T ss_pred cEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhh------------------------ccCCCcEEEEEec-CCEEEE
Confidence 8899999999999998 8999999999998776422 2357789999997 445666
Q ss_pred EEcCCCcEEEEeC
Q psy9770 788 TGDDFGKLKLYSY 800 (811)
Q Consensus 788 s~~~dg~v~vw~~ 800 (811)
++++||.+.+|-+
T Consensus 449 ~~~~~g~~~i~~l 461 (464)
T 3v7d_B 449 AVEKDGQSFLEIL 461 (464)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEeCCeEEEEEe
Confidence 6777886665543
No 60
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-34 Score=310.43 Aligned_cols=306 Identities=12% Similarity=0.079 Sum_probs=262.4
Q ss_pred eEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCC
Q psy9770 392 KITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNG 470 (811)
Q Consensus 392 ~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg 470 (811)
....+.+|...|.+++|+|++..+++++.|+.|++|++.++..+... .+|...|.+++|+|++. +++++.||
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTL-------DGHTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEE-------CCCSSCEEEEEECTTSSEEEEEETTT
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhh-------hhcCCcEEEEEEcCCCCEEEEEeCCC
Confidence 45668899999999999998888888888999999999977766554 56778899999999998 56999999
Q ss_pred cEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCC-----CcEEEEeCCCCCccceeeeccccCCeEEEeeCC
Q psy9770 471 NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKD-----GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGR 545 (811)
Q Consensus 471 ~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~d-----g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~ 545 (811)
.|++||+.+++....+. |...|.+++|+|++++|++++.+ |.|++||+...........
T Consensus 97 ~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~-------------- 160 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK-------------- 160 (369)
T ss_dssp EEEEEETTTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE--------------
T ss_pred eEEEEECCCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc--------------
Confidence 99999999999988886 88999999999999999999998 9999999876544111110
Q ss_pred CCeEEEEeCCCeEEEEEccCCceeeeeeccc--ceEEEEECCCCCeEEEEECCCeEEEEeCCC-CcEEEEe-cCCCCeEE
Q psy9770 546 GSQLIVGTTRNCILVGSLNLGFSPVVLGHTD--ELWALAAHPSLSQFLTAGFDRIVQLWDSMS-HSVVWSK-DIAEQAQS 621 (811)
Q Consensus 546 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~--~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~-~~~~~~~-~~~~~v~~ 621 (811)
........+..|.. .+.+++|+|++++|++++.||.|++||+.+ .+.+..+ .+...|.+
T Consensus 161 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 223 (369)
T 3zwl_B 161 -----------------VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISD 223 (369)
T ss_dssp -----------------ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEE
T ss_pred -----------------cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeE
Confidence 01112233445665 899999999999999999999999999998 5666654 57889999
Q ss_pred EEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCC--------------cEEEEEe
Q psy9770 622 ATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDN--------------YIYVYEV 687 (811)
Q Consensus 622 ~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg--------------~I~iwd~ 687 (811)
++|+|++.+|++++.||.|++||+.+++.+..+. +...+..++|+|+++++++++.++ .+++||+
T Consensus 224 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 224 MQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred EEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 9999999999999999999999999999888887 678899999999999999999888 8999999
Q ss_pred cCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCC
Q psy9770 688 SGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQS 742 (811)
Q Consensus 688 ~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~ 742 (811)
.++ +.+..+.+|...|++++|+|++++|++++.||.|++|++..+.....+
T Consensus 303 ~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 303 IFE----EEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp TTC----CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred CCC----cchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHH
Confidence 886 566678899999999999999999999999999999999987655443
No 61
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-36 Score=339.03 Aligned_cols=316 Identities=13% Similarity=0.048 Sum_probs=234.9
Q ss_pred cCCCc-EEEEcCCCcEEEEecCCceEE----EEeecccccceEEEEEecC------CcEEEEecCCCcEEEEeCCCCCcc
Q psy9770 458 TQGGE-VLSGDSNGNIIVWTRGSNTIS----KFIRNVHEGSVFSICVLKE------GSIISAGGKDGRLLQFDSNLQPTG 526 (811)
Q Consensus 458 s~~g~-llsg~~dg~I~vwd~~~~~~~----~~~~~~h~~~V~~l~~s~d------g~~l~s~s~dg~I~~wd~~~~~~~ 526 (811)
+|+++ +++++.||+|+|||+.+++.. ..+. .|.+.|.+++|+|+ +.+|++++.||+|++||+......
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~-~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV-HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD 248 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEE-ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEE-ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc
Confidence 57777 558999999999999876542 2344 67889999999996 579999999999999999765431
Q ss_pred ---------ceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCc--eeeeeecccceEEE--EECCCC-CeEEE
Q psy9770 527 ---------YEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGF--SPVVLGHTDELWAL--AAHPSL-SQFLT 592 (811)
Q Consensus 527 ---------~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~--~~~~~~h~~~v~~l--~~sp~~-~~l~s 592 (811)
....+.+|...|.++++++++.+++|+.++.|++||+.++. ...+.+|...|.++ +|+|++ .+|++
T Consensus 249 ~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 249 VHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp SSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEE
T ss_pred cccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEE
Confidence 12356778899999999988999999999999999998652 34578999999999 578887 89999
Q ss_pred EECCCeEEEEeCCCCcEEEEe-cCC--CCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccC
Q psy9770 593 AGFDRIVQLWDSMSHSVVWSK-DIA--EQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPD 669 (811)
Q Consensus 593 ~s~dg~v~iwd~~~~~~~~~~-~~~--~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spd 669 (811)
++.|++|+|||++++++...+ .+. ..+.+++|+|+++.+++++.|+.|++||++++.++..+.+|...|++++|+|+
T Consensus 329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 999999999999887654332 222 35889999999999999999999999999999988888899999999999999
Q ss_pred CCEEEEEecCCcEEEEEecCCCcceeEEEEe--cCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccc
Q psy9770 670 GKLLALGSRDNYIYVYEVSGDSRKYSRVGRC--TGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRD 747 (811)
Q Consensus 670 g~~lasgs~dg~I~iwd~~~~~~~~~~~~~~--~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~ 747 (811)
|++|++|+.|++|+|||+.... +...... ..+...|.+++|+|+++.+. ...+..+..|+. ++.++..
T Consensus 409 g~~l~Sgs~Dgtv~lwd~~~~~--~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~~~~~~~~~~-~g~~~~~------ 478 (524)
T 2j04_B 409 HPMVLAGSADGSLIITNAARRL--LHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDSSYEVYPLTV-NDVSKAK------ 478 (524)
T ss_dssp CCBCEEEETTTEEECCBSCSST--TTCC------CCCCEEEECBCCSSSCEEE-ECCCCCCCC-----------------
T ss_pred CCeEEEEECCCEEEEEechHhh--ccccccCccceeeeEEEEeccCCCCCeEE-ccCCceeccccc-CCcceee------
Confidence 9999999999999999986531 1100000 01122578999999998553 222222222221 2332222
Q ss_pred eeEeccceeeccceeeeCCCCCCCCccceEEecCCCC---EEEEEcCCCcEEEEeCCCC
Q psy9770 748 VVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDAR---VIATGDDFGKLKLYSYPAV 803 (811)
Q Consensus 748 ~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~---~Las~~~dg~v~vw~~~~~ 803 (811)
..+|...|++|+|+|++. +||+|+.||+|+||++.-.
T Consensus 479 -------------------l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 479 -------------------IDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp ----------------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred -------------------ecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 234678999999999964 9999999999999998653
No 62
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.8e-35 Score=317.78 Aligned_cols=293 Identities=13% Similarity=0.173 Sum_probs=247.0
Q ss_pred CCCCceEEEEEEcCC---Cc--EEEEcCCCcEEEEecCCceEEEEee----cccccceEEEEEecC----CcEEEEecCC
Q psy9770 446 RDKPKYVTCLAFTQG---GE--VLSGDSNGNIIVWTRGSNTISKFIR----NVHEGSVFSICVLKE----GSIISAGGKD 512 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~---g~--llsg~~dg~I~vwd~~~~~~~~~~~----~~h~~~V~~l~~s~d----g~~l~s~s~d 512 (811)
.+|...|.+++|+|+ +. +++++.++.|++||+.+++.+..+. ..|...|.+++|+++ +.+|++++.|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 568899999999984 33 7788888899999999887666654 125678999999999 7799999999
Q ss_pred CcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECC-CCCeEE
Q psy9770 513 GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHP-SLSQFL 591 (811)
Q Consensus 513 g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp-~~~~l~ 591 (811)
|.|++||+...+. ...+.+|...|.+++|+| ++.+|+
T Consensus 95 g~i~v~d~~~~~~------------------------------------------~~~~~~~~~~i~~~~~~~~~~~~l~ 132 (366)
T 3k26_A 95 GIIRIINPITMQC------------------------------------------IKHYVGHGNAINELKFHPRDPNLLL 132 (366)
T ss_dssp CEEEEECTTTCCE------------------------------------------EEEEESCCSCEEEEEECSSCTTEEE
T ss_pred CEEEEEEchhceE------------------------------------------eeeecCCCCcEEEEEECCCCCCEEE
Confidence 9999999876544 123456889999999999 899999
Q ss_pred EEECCCeEEEEeCCCCcEEEEe----cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEec------------
Q psy9770 592 TAGFDRIVQLWDSMSHSVVWSK----DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHT------------ 655 (811)
Q Consensus 592 s~s~dg~v~iwd~~~~~~~~~~----~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~------------ 655 (811)
+++.|+.|++||+.+++.+..+ .+...|.+++|+|++.+|++++.||.|++||+.+++....+.
T Consensus 133 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 212 (366)
T 3k26_A 133 SVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNR 212 (366)
T ss_dssp EEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSS
T ss_pred EEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcc
Confidence 9999999999999999988876 578899999999999999999999999999999876554333
Q ss_pred ----------------CCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCc----------ceeEEEEecCCCCCeeE
Q psy9770 656 ----------------DGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR----------KYSRVGRCTGHSSFITH 709 (811)
Q Consensus 656 ----------------~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~----------~~~~~~~~~~h~~~V~~ 709 (811)
.|...|.+++|+ +++|++++.|+.|++||+.+... ....+..+.+|...|++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 290 (366)
T 3k26_A 213 PFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWY 290 (366)
T ss_dssp CCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSC
T ss_pred cccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEE
Confidence 388999999998 77999999999999999987643 22457778899999999
Q ss_pred EEeCCC--CCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEE
Q psy9770 710 LDWSED--SMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIA 787 (811)
Q Consensus 710 l~~spd--g~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~La 787 (811)
++|+|+ +++|++++.||.|++||+.+++...... ..+....|...|++++|+|++++|+
T Consensus 291 ~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------------------~~~~~~~~~~~v~~~~~s~~~~~l~ 351 (366)
T 3k26_A 291 MRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKC-------------------TTLTHHKCGAAIRQTSFSRDSSILI 351 (366)
T ss_dssp CCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEE-------------------EEECCTTCCSCEEEEEECTTSSEEE
T ss_pred EEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccc-------------------eEEcccccCCceEEEEeCCCCCeEE
Confidence 999999 9999999999999999999887553211 1112233478899999999999999
Q ss_pred EEcCCCcEEEEeCC
Q psy9770 788 TGDDFGKLKLYSYP 801 (811)
Q Consensus 788 s~~~dg~v~vw~~~ 801 (811)
+++.||.|+|||+.
T Consensus 352 s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 352 AVCDDASIWRWDRL 365 (366)
T ss_dssp EEETTSEEEEEEC-
T ss_pred EEeCCCEEEEEEec
Confidence 99999999999985
No 63
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.3e-35 Score=318.27 Aligned_cols=296 Identities=17% Similarity=0.213 Sum_probs=249.4
Q ss_pred eeeCCCcEEEEEecCC----CCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCC----Cc-EEEE
Q psy9770 396 TKCSVDTVVAAEFHPL----DRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQG----GE-VLSG 466 (811)
Q Consensus 396 ~~~~~~~V~~v~fsp~----~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~----g~-llsg 466 (811)
..+|...|.+++|+|+ +..++++++++.|++|++.+++.+........ ..|...|.+++|+|+ +. +++|
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVD--ADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEEC--SCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccc--cCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 4479999999999984 45577777889999999997766655433221 346678999999999 55 6699
Q ss_pred cCCCcEEEEecCCceEEEEeecccccceEEEEEec-CCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCC
Q psy9770 467 DSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLK-EGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGR 545 (811)
Q Consensus 467 ~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~-dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~ 545 (811)
+.||.|++||+.+++.+..+. .|...|.+++|+| ++.+|++++.||.|++||+..... ...+
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~-------------- 154 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL--VAIF-------------- 154 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE--EEEE--------------
T ss_pred cCCCEEEEEEchhceEeeeec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE--EEEe--------------
Confidence 999999999999999999888 8999999999999 999999999999999999976544 0000
Q ss_pred CCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe------------
Q psy9770 546 GSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK------------ 613 (811)
Q Consensus 546 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~------------ 613 (811)
..+.+|...|.+++|+|++.+|++++.|+.|++||+.+++....+
T Consensus 155 -----------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 211 (366)
T 3k26_A 155 -----------------------GGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTN 211 (366)
T ss_dssp -----------------------CSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCS
T ss_pred -----------------------cccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCc
Confidence 012468889999999999999999999999999999987544322
Q ss_pred -----------------cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcce--------------eEEecCCCCCeE
Q psy9770 614 -----------------DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREA--------------YSIHTDGNEPIQ 662 (811)
Q Consensus 614 -----------------~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~--------------~~~~~~~~~~i~ 662 (811)
.+...|.+++|+ +.+|++++.||.|++||+.++.. +..+..|...|.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 289 (366)
T 3k26_A 212 RPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIW 289 (366)
T ss_dssp SCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSS
T ss_pred ccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEE
Confidence 177899999998 77999999999999999987744 777888999999
Q ss_pred EEEEccC--CCEEEEEecCCcEEEEEecCCCcceeEEEEecCC--CCCeeEEEeCCCCCeEEEecCCceEEEEECCC
Q psy9770 663 VVKFSPD--GKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGH--SSFITHLDWSEDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 663 ~i~~spd--g~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h--~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
+++|+|+ +++|++|+.||.|++||+.++.........+.+| ...|++++|+|++++|++++.||.|++||+.+
T Consensus 290 ~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 290 YMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 9999999 9999999999999999999876554456677777 79999999999999999999999999999853
No 64
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-36 Score=335.29 Aligned_cols=372 Identities=11% Similarity=0.115 Sum_probs=277.4
Q ss_pred EEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcc
Q psy9770 306 SIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQ 385 (811)
Q Consensus 306 a~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~ 385 (811)
.|+|+++.++++. .|+ .+++.+..+. .+|...|.+++|+| .+|.+|++ ++.|++|+|||+.
T Consensus 34 ~f~~~~~~~~~~~--------------~w~-~~g~~~~~~~-~~h~~~V~~~~~s~-~~~~~l~s--~s~dg~v~vwd~~ 94 (437)
T 3gre_A 34 EFGPIQEIVRSPN--------------MGN-LRGKLIATLM-ENEPNSITSSAVSP-GETPYLIT--GSDQGVIKIWNLK 94 (437)
T ss_dssp GGCCCCCCCCCCC--------------GGG-CCCCEEEEEC-TTTTSCEEEEEEEC-SSSCEEEE--EETTSEEEEEEHH
T ss_pred hcCCccccccccc--------------ccc-ccceEEeeec-cCCCCceEEEEECC-CCCCEEEE--ecCCceEEEeECc
Confidence 4678887777653 477 5678888871 38999999999998 35789998 7899999999998
Q ss_pred c---CCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEc---CCceeeeecccccccCCCCceEEEEEEcC
Q psy9770 386 K---SDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTID---AGGTLYKKQGIFEMIRDKPKYVTCLAFTQ 459 (811)
Q Consensus 386 ~---~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~---~~~~~~~~~~~~~~l~~~~~~v~~l~~s~ 459 (811)
+ +........+ .|...|.+++|+|++..+++++.|+.|++|+++ ++..+.... . ..+..+.|++
T Consensus 95 ~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~-------~--~~i~~~~~~~ 164 (437)
T 3gre_A 95 EIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLN-------C--ECIRKINLKN 164 (437)
T ss_dssp HHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEE-------E--EEEEEEEGGG
T ss_pred ccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccc-------c--ceeEEEEccC
Confidence 7 4311123333 489999999999988888888889999999995 233222111 0 1344444444
Q ss_pred CCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEE--EecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCC
Q psy9770 460 GGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSIC--VLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGG 537 (811)
Q Consensus 460 ~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~--~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~ 537 (811)
++ +...+.++. +++++.+|++++.||.|++||+.....
T Consensus 165 ~~----------------------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~------------ 204 (437)
T 3gre_A 165 FG----------------------------KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER------------ 204 (437)
T ss_dssp GS----------------------------SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE------------
T ss_pred cc----------------------------cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee------------
Confidence 32 344555665 568999999999999999999986554
Q ss_pred eEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeee--cccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe--
Q psy9770 538 IRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLG--HTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK-- 613 (811)
Q Consensus 538 v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~--h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~-- 613 (811)
...+.+ |...|.+++|+|++.+|++++.||.|++||+.+++++..+
T Consensus 205 ------------------------------~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 254 (437)
T 3gre_A 205 ------------------------------LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF 254 (437)
T ss_dssp ------------------------------EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC
T ss_pred ------------------------------eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec
Confidence 112233 7889999999999999999999999999999999988875
Q ss_pred cCCCCeEEEEEc----CCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecC
Q psy9770 614 DIAEQAQSATFS----PDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSG 689 (811)
Q Consensus 614 ~~~~~v~~~~~s----pdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~ 689 (811)
.+...|.+++|+ |++.+|++|+.||.|++||+.+++.+..+.+|...+..+.|+|+++.+ .+..
T Consensus 255 ~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~-------- 322 (437)
T 3gre_A 255 GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL----EELN-------- 322 (437)
T ss_dssp TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG----GGCC--------
T ss_pred CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc----ccce--------
Confidence 566789999665 568899999999999999999999999999999999999999998766 1111
Q ss_pred CCcceeEEEEecC--CCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCcc--ceeE-----eccceeecc-
Q psy9770 690 DSRKYSRVGRCTG--HSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLR--DVVW-----ESNSCTLTF- 759 (811)
Q Consensus 690 ~~~~~~~~~~~~~--h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~- 759 (811)
+.+ |...|++++|+ ++++|++++.||.|++||+.+++.+..+.... ...+ .........
T Consensus 323 ----------~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (437)
T 3gre_A 323 ----------FCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK 391 (437)
T ss_dssp ----------CCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE
T ss_pred ----------ecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe
Confidence 334 88999999999 88999999999999999999998776543321 1111 111110000
Q ss_pred ----ceeeeCCCCCCCCccceEEecCC--CCEEEEEcCCCcEEEEe
Q psy9770 760 ----TTIGIWPEGADGTDVNSCERSHD--ARVIATGDDFGKLKLYS 799 (811)
Q Consensus 760 ----~~~~i~~~~~h~~~I~~l~~s~d--g~~Las~~~dg~v~vw~ 799 (811)
....+.....|...|++++|+++ +.+|++|+.||.|+||+
T Consensus 392 ~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 392 MKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 00001112348899999999998 88999999999999995
No 65
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.2e-34 Score=314.33 Aligned_cols=288 Identities=13% Similarity=0.110 Sum_probs=231.5
Q ss_pred ccceEEEEEecCCcEEEEecCCC-------cEEEEeCCCCCccc--------eeeeccccCCeEEEeeCCCCeEEEE---
Q psy9770 491 EGSVFSICVLKEGSIISAGGKDG-------RLLQFDSNLQPTGY--------EAQIAEHLGGIRTVSEGRGSQLIVG--- 552 (811)
Q Consensus 491 ~~~V~~l~~s~dg~~l~s~s~dg-------~I~~wd~~~~~~~~--------~~~~~~~~~~v~~l~~~~~~~l~~~--- 552 (811)
..+|++++|+||+++|++|+.+. .|++|++....... ...+..+...+.++++..+ .++++
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~-~~~~g~~~ 92 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKG-IILVGCNE 92 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETT-EEEEECCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCC-EEEEEECC
Confidence 45899999999999999987543 59999987554311 2345567777888876543 34444
Q ss_pred --------eCCCeEEEEEccCCcee--e--------eeecccceEEEEECCCCCeEEEEE--CCCeEEEEeCCCCcEEEE
Q psy9770 553 --------TTRNCILVGSLNLGFSP--V--------VLGHTDELWALAAHPSLSQFLTAG--FDRIVQLWDSMSHSVVWS 612 (811)
Q Consensus 553 --------~~~~~i~~~d~~~~~~~--~--------~~~h~~~v~~l~~sp~~~~l~s~s--~dg~v~iwd~~~~~~~~~ 612 (811)
..++.+++|++...... . ...+...+.+++|+|||+++++++ .|++|+|||+.+++++..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 34667999997654211 1 123445688999999999987655 789999999999999999
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeE--EecCCCCCeEEEEEccCCCEEEEEecCC----cEEEEE
Q psy9770 613 KDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYS--IHTDGNEPIQVVKFSPDGKLLALGSRDN----YIYVYE 686 (811)
Q Consensus 613 ~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~--~~~~~~~~i~~i~~spdg~~lasgs~dg----~I~iwd 686 (811)
+.+...|.+++|+|||++|++++. +.+.+|+..+++.+. ....|...|.+++|+|||+++++++.|+ .+++|+
T Consensus 173 ~~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~ 251 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKIS 251 (365)
T ss_dssp EECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEE
T ss_pred eCCCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecc
Confidence 889999999999999999999875 556777777776554 3456888999999999999999999887 688899
Q ss_pred ecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCC
Q psy9770 687 VSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWP 766 (811)
Q Consensus 687 ~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 766 (811)
+............+.+|...|++++|+|||++||+|+.|++|+|||+.+++.+..+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~------------------------ 307 (365)
T 4h5i_A 252 IKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF------------------------ 307 (365)
T ss_dssp EETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE------------------------
T ss_pred cccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe------------------------
Confidence 88765544556678899999999999999999999999999999999998876542
Q ss_pred CCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCC
Q psy9770 767 EGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQ 804 (811)
Q Consensus 767 ~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~ 804 (811)
..+|...|++|+|||||++||+|+.|++|+||++|...
T Consensus 308 ~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 308 KQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 13578899999999999999999999999999998653
No 66
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.3e-34 Score=317.93 Aligned_cols=307 Identities=11% Similarity=0.080 Sum_probs=249.8
Q ss_pred eEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCC----C---c-E
Q psy9770 392 KITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQG----G---E-V 463 (811)
Q Consensus 392 ~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~----g---~-l 463 (811)
....+.+|.+.|.+++|+| ..+++++.|+.|++|++.++...... .....+.+|...|.+++|+|+ + . +
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPK-DKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGG-GGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCC-CcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 4556778999999999998 66777777999999999966511110 011122567888999999999 8 6 6
Q ss_pred EEEcCCCcEEEEecCCceE-----EEEeeccc-----ccceEEEEEe----cCCcE-EEEecCCCcEEEEeCCC------
Q psy9770 464 LSGDSNGNIIVWTRGSNTI-----SKFIRNVH-----EGSVFSICVL----KEGSI-ISAGGKDGRLLQFDSNL------ 522 (811)
Q Consensus 464 lsg~~dg~I~vwd~~~~~~-----~~~~~~~h-----~~~V~~l~~s----~dg~~-l~s~s~dg~I~~wd~~~------ 522 (811)
++++.||.|++||+.+++. ...+. .| ...|.+++|+ |++.+ |++++.||.|++||+..
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLD-LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEEC-CSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeec-ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 6999999999999988775 66666 77 5999999999 99999 99999999999999976
Q ss_pred CCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEE
Q psy9770 523 QPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLW 602 (811)
Q Consensus 523 ~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iw 602 (811)
..... +.+.+.+. +. ......|...|.+++|+|++ +|++++.|+.|++|
T Consensus 164 ~~~~~---------------~~~~~~~~-~~--------------~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 164 SLTLN---------------WSPTLELQ-GT--------------VESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp HTTTC---------------CCCEEEEE-EE--------------ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred cceee---------------ccCcceee-ee--------------eccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 33200 00000000 00 01113478899999999999 99999999999999
Q ss_pred eCCCCcEEEEec----C---CCCeEEEEEcCCCCEEEEEEeC---CeEEEEecCCcceeEEecC-------------CCC
Q psy9770 603 DSMSHSVVWSKD----I---AEQAQSATFSPDGSIIIVGCIA---GRWLVMDSETREAYSIHTD-------------GNE 659 (811)
Q Consensus 603 d~~~~~~~~~~~----~---~~~v~~~~~spdg~~la~g~~d---g~i~i~d~~~~~~~~~~~~-------------~~~ 659 (811)
|+.+++.+..+. + ...+.+++|+|++++|++++.| |.|++||+.+++.+..+.. |..
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 999999888765 4 8899999999999999999999 9999999999999999988 999
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEec------CC---------------CCCeeEEEeCCCC--
Q psy9770 660 PIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCT------GH---------------SSFITHLDWSEDS-- 716 (811)
Q Consensus 660 ~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~------~h---------------~~~V~~l~~spdg-- 716 (811)
.|.+++|+|++++|++++.||.|++||+.++ +.+..+. +| ...|++++|+|++
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~ 368 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTK----ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR 368 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTT----EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTS
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCCC----ceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccc
Confidence 9999999999999999999999999999886 5566677 77 9999999999998
Q ss_pred --------CeEEEecCCceEEEEECCCCc
Q psy9770 717 --------MYIRSNSGDYELLYWNAGTCR 737 (811)
Q Consensus 717 --------~~L~s~s~Dg~i~iWd~~~~~ 737 (811)
++|++++.||.|++|++.+|+
T Consensus 369 ~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 369 SGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp BSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998864
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.4e-34 Score=315.78 Aligned_cols=309 Identities=13% Similarity=0.175 Sum_probs=250.6
Q ss_pred eEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCc------EEEEeccCCccccEEEEEEecCCC-
Q psy9770 292 QRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLF------TVSIIGIGEFERSISCLSFSKADG- 364 (811)
Q Consensus 292 ~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~------~~~~l~~~~h~~~V~~l~fs~~~d- 364 (811)
.+.+.+|.+.|.+++|+| ++||+|+.|| .|+|||+.+++ .+..+. +|...|.+++|+| +
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg--------~i~iw~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~--~~ 74 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDG--------YLKVWDNKLLDNENPKDKSYSHF--VHKSGLHHVDVLQ--AI 74 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTS--------EEEEEESBCCTTCCGGGGEEEEE--CCTTCEEEEEEEE--EE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCC--------EEEEEECCCcccccCCCcceEEe--cCCCcEEEEEEec--cc
Confidence 355789999999999999 7999999999 99999999988 677776 8999999999999 7
Q ss_pred ---C---cEEEEEeCCCCceEEEEEcccCCCcce-----EEEeeeC-----CCcEEEEEec----CCCCC-eEEEECCCc
Q psy9770 365 ---G---TFLCAVDEGNDYNISVWDWQKSDRGHK-----ITETKCS-----VDTVVAAEFH----PLDRN-NIVTCGKSH 423 (811)
Q Consensus 365 ---g---~~Lasv~~s~d~~i~vWd~~~~~~~~~-----~~~~~~~-----~~~V~~v~fs----p~~~~-ll~~~~d~~ 423 (811)
| .+|++ ++.|+.|++||+.+++ . +..+..| ...|.+++|+ |++.. +++++.++.
T Consensus 75 ~~~g~~~~~l~s--~~~dg~i~iw~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~ 149 (397)
T 1sq9_A 75 ERDAFELCLVAT--TSFSGDLLFYRITRED---ETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGT 149 (397)
T ss_dssp ETTTEEEEEEEE--EETTSCEEEEEEEECT---TTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSC
T ss_pred ccCCccccEEEE--EcCCCCEEEEEccCCc---ccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCc
Confidence 8 89988 6889999999999988 6 8888888 5999999999 98888 777788999
Q ss_pred EEEEEEcC------Cceee-----eecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecc---
Q psy9770 424 INFWTIDA------GGTLY-----KKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNV--- 489 (811)
Q Consensus 424 i~iwd~~~------~~~~~-----~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~--- 489 (811)
|++||+.+ +..+. ...+.......|...+.+++|+|++.+++++.||.|++||+.+++.+..+. .
T Consensus 150 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~ 228 (397)
T 1sq9_A 150 TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFE-SQHS 228 (397)
T ss_dssp EEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEE-CCC-
T ss_pred EEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEe-cccc
Confidence 99999996 44433 221111111346678999999999944489999999999999999998888 7
Q ss_pred c---ccceEEEEEecCCcEEEEecCC---CcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEc
Q psy9770 490 H---EGSVFSICVLKEGSIISAGGKD---GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSL 563 (811)
Q Consensus 490 h---~~~V~~l~~s~dg~~l~s~s~d---g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~ 563 (811)
| ...|.+++|+|++++|++++.| |.|++||+..... ...+.... .+.
T Consensus 229 h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~--~~~~~~~~--------~~~----------------- 281 (397)
T 1sq9_A 229 MINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER--IGSLSVPT--------HSS----------------- 281 (397)
T ss_dssp --CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE--EEEECBC-----------------------------
T ss_pred ccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc--cceeccCc--------ccc-----------------
Confidence 8 9999999999999999999999 9999999986654 11111000 000
Q ss_pred cCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEec-------C---------------CCCeEE
Q psy9770 564 NLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKD-------I---------------AEQAQS 621 (811)
Q Consensus 564 ~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-------~---------------~~~v~~ 621 (811)
........|...|.+++|+|++++|++++.|+.|++||+.+++.+..+. + ...|.+
T Consensus 282 --~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~ 359 (397)
T 1sq9_A 282 --QASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD 359 (397)
T ss_dssp ------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEE
T ss_pred --cccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeE
Confidence 0000112388899999999999999999999999999999999888865 5 789999
Q ss_pred EEEcCCC----------CEEEEEEeCCeEEEEecCCcc
Q psy9770 622 ATFSPDG----------SIIIVGCIAGRWLVMDSETRE 649 (811)
Q Consensus 622 ~~~spdg----------~~la~g~~dg~i~i~d~~~~~ 649 (811)
++|+|+| ++|++++.||.|++||+.+++
T Consensus 360 ~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 360 VKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred EEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 9999998 799999999999999998763
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.9e-34 Score=315.34 Aligned_cols=300 Identities=14% Similarity=0.089 Sum_probs=245.1
Q ss_pred EEecCCceEEEEeecccccceEEEEEecCC-cEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCC-C-CeEE
Q psy9770 474 VWTRGSNTISKFIRNVHEGSVFSICVLKEG-SIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGR-G-SQLI 550 (811)
Q Consensus 474 vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg-~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~~l~ 550 (811)
+|+.........+. +|...|.+++|+|++ ++|++|+.||.|++||+............+|...|.++++++ + ..++
T Consensus 57 ~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 135 (383)
T 3ei3_B 57 IRSLKSYKLHRTAS-PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLF 135 (383)
T ss_dssp HHHHTTCEEEEEEC-CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEE
T ss_pred cccccccceEEecc-CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEE
Confidence 34445566677777 899999999999999 999999999999999999877644444557999999999998 4 5677
Q ss_pred EEeCCCeEEEEEccCCceeeeeecc---cceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEE-ecCCCCeEEEEEcC
Q psy9770 551 VGTTRNCILVGSLNLGFSPVVLGHT---DELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWS-KDIAEQAQSATFSP 626 (811)
Q Consensus 551 ~~~~~~~i~~~d~~~~~~~~~~~h~---~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~-~~~~~~v~~~~~sp 626 (811)
+++.++.|++||+.......+..|. ..|.+++|+|++++|++++.|+.|++||+. ++.+.. ..+...|.+++|+|
T Consensus 136 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~ 214 (383)
T 3ei3_B 136 VSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNP 214 (383)
T ss_dssp EEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECS
T ss_pred EEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECC
Confidence 8899999999999987666665544 789999999999999999999999999995 444444 56889999999999
Q ss_pred CCC-EEEEEEeCCeEEEEecCC----cceeEEecCCCCCeEEEEEcc-CCCEEEEEecCCcEEEEEecCCCcceeEEEE-
Q psy9770 627 DGS-IIIVGCIAGRWLVMDSET----REAYSIHTDGNEPIQVVKFSP-DGKLLALGSRDNYIYVYEVSGDSRKYSRVGR- 699 (811)
Q Consensus 627 dg~-~la~g~~dg~i~i~d~~~----~~~~~~~~~~~~~i~~i~~sp-dg~~lasgs~dg~I~iwd~~~~~~~~~~~~~- 699 (811)
+++ +|++++.||.|++||+.+ +..+..+ +|...|.+++|+| ++++|++++.|+.|++||+.++.........
T Consensus 215 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 215 RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccc
Confidence 999 999999999999999998 5566666 6889999999999 9999999999999999999887543322211
Q ss_pred --ecCCC----------CCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCC
Q psy9770 700 --CTGHS----------SFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPE 767 (811)
Q Consensus 700 --~~~h~----------~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 767 (811)
...|. ..+..++|+||+++ +++.|+.|++||+.+++.+..+..
T Consensus 294 ~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~----------------------- 348 (383)
T 3ei3_B 294 HRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD----------------------- 348 (383)
T ss_dssp BCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB-----------------------
T ss_pred ccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC-----------------------
Confidence 11222 34445777777777 788999999999999887654321
Q ss_pred CCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCC
Q psy9770 768 GADGTDVNSCERSHDARVIATGDDFGKLKLYSYPA 802 (811)
Q Consensus 768 ~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~ 802 (811)
..|...+..++|+|++++|++|+ ||.|+||++.+
T Consensus 349 ~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 349 PNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 12456688889999999999997 89999999875
No 69
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.7e-34 Score=315.68 Aligned_cols=288 Identities=17% Similarity=0.182 Sum_probs=236.5
Q ss_pred eEEEeeeCCCcEEEEEecCCC-CCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcC-CCc-EEEEcC
Q psy9770 392 KITETKCSVDTVVAAEFHPLD-RNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQ-GGE-VLSGDS 468 (811)
Q Consensus 392 ~~~~~~~~~~~V~~v~fsp~~-~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~-~g~-llsg~~ 468 (811)
....+.+|...|.+++|+|++ ..+++++.|+.|++|++.++....... ..+|...|.+++|+| ++. +++++.
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ-----GMGPGDAITGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEEC-----CCSTTCBEEEEEEETTEEEEEEEEET
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeee-----cCCcCCceeEEEeCCCCCCEEEEEeC
Confidence 677888999999999999988 566666669999999999666554332 146888999999999 555 669999
Q ss_pred CCcEEEEecCCceEEEEee--cccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCC
Q psy9770 469 NGNIIVWTRGSNTISKFIR--NVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRG 546 (811)
Q Consensus 469 dg~I~vwd~~~~~~~~~~~--~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~ 546 (811)
||.|++||+.+. ....+. ..|...|.+++|+|++++|++++.|+.|++||+....
T Consensus 140 d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------------------- 196 (383)
T 3ei3_B 140 RGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHE---------------------- 196 (383)
T ss_dssp TTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCE----------------------
T ss_pred CCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCE----------------------
Confidence 999999999864 444443 1344789999999999999999999999999984221
Q ss_pred CeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCC-eEEEEECCCeEEEEeCCC----CcEEEEecCCCCeEE
Q psy9770 547 SQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLS-QFLTAGFDRIVQLWDSMS----HSVVWSKDIAEQAQS 621 (811)
Q Consensus 547 ~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~v~iwd~~~----~~~~~~~~~~~~v~~ 621 (811)
...+.+|...|.+++|+|+++ +|++++.|+.|++||+.+ +.++..+.+...+.+
T Consensus 197 ---------------------~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 255 (383)
T 3ei3_B 197 ---------------------IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNA 255 (383)
T ss_dssp ---------------------EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEE
T ss_pred ---------------------EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEE
Confidence 123457889999999999999 999999999999999987 667777889999999
Q ss_pred EEEcC-CCCEEEEEEeCCeEEEEecCCcceeEEecCCC-----------------CCeEEEEEccCCCEEEEEecCCcEE
Q psy9770 622 ATFSP-DGSIIIVGCIAGRWLVMDSETREAYSIHTDGN-----------------EPIQVVKFSPDGKLLALGSRDNYIY 683 (811)
Q Consensus 622 ~~~sp-dg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~-----------------~~i~~i~~spdg~~lasgs~dg~I~ 683 (811)
++|+| ++.+|++++.||.|++||+.+++....+..|. ..+..++|+|||++ +++.|+.|+
T Consensus 256 ~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~ 333 (383)
T 3ei3_B 256 AYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTID 333 (383)
T ss_dssp EEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEE
T ss_pred EEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEE
Confidence 99999 99999999999999999999887766655432 33445677777776 777899999
Q ss_pred EEEecCCCcceeEEEEecC--CCCCeeEEEeCCCCCeEEEecCCceEEEEECCC
Q psy9770 684 VYEVSGDSRKYSRVGRCTG--HSSFITHLDWSEDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 684 iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
|||+.++ +.+..+.+ |...+..++|+|++++|++++ ||.|++||+++
T Consensus 334 iwd~~~~----~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 334 IYDANSG----GLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEETTTC----CEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EEecCCC----ceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 9999886 45556665 567788889999999999997 99999999875
No 70
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.1e-34 Score=311.66 Aligned_cols=291 Identities=13% Similarity=0.162 Sum_probs=249.9
Q ss_pred CCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCce--EEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCC
Q psy9770 447 DKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNT--ISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQ 523 (811)
Q Consensus 447 ~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~--~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~ 523 (811)
.|...|.+++|+|++. +++++.||.|++||+.+++ ....+. .|...|.+++|+|++++|++++.||.|++||+...
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 3667899999999999 5588899999999999887 777777 89999999999999999999999999999999877
Q ss_pred CccceeeeccccCCeEEEeeCCCC-eEEEEeCCCeEEEEEccCCc-----eeeeeecccceEEEEECCCCCeEEEEECCC
Q psy9770 524 PTGYEAQIAEHLGGIRTVSEGRGS-QLIVGTTRNCILVGSLNLGF-----SPVVLGHTDELWALAAHPSLSQFLTAGFDR 597 (811)
Q Consensus 524 ~~~~~~~~~~~~~~v~~l~~~~~~-~l~~~~~~~~i~~~d~~~~~-----~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg 597 (811)
.......+..+...+.++++++++ .+++++.++.|++||+.... .....+|...|.+++|+|++++|++++.|+
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 653455567788999999998876 56778889999999998764 223357889999999999999999999999
Q ss_pred eEEEEeCC------------------CCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCC
Q psy9770 598 IVQLWDSM------------------SHSVVWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGN 658 (811)
Q Consensus 598 ~v~iwd~~------------------~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~ 658 (811)
.|++||+. .++.+..+ .+...+.+++|+|++.+|++++.||.|++||+.+++.+..+..|.
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 244 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 244 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC
Confidence 99999953 56666665 577899999999999999999999999999999999999999999
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEE------------------------------------EEe-c
Q psy9770 659 EPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRV------------------------------------GRC-T 701 (811)
Q Consensus 659 ~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~------------------------------------~~~-~ 701 (811)
..|.+++|+|++++|++| .|+.|++|++......+..+ ..+ .
T Consensus 245 ~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (372)
T 1k8k_C 245 LPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDS 323 (372)
T ss_dssp CCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSS
T ss_pred CCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccc
Confidence 999999999999998887 89999999998811111110 223 4
Q ss_pred CCCCCeeEEEeC-CCC---CeEEEecCCceEEEEECCCCccc
Q psy9770 702 GHSSFITHLDWS-EDS---MYIRSNSGDYELLYWNAGTCRQI 739 (811)
Q Consensus 702 ~h~~~V~~l~~s-pdg---~~L~s~s~Dg~i~iWd~~~~~~~ 739 (811)
+|...|++++|. ++| .+|++++.||.|++|++.+++.+
T Consensus 324 ~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 324 LHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp SSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred cccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhHh
Confidence 899999999966 676 99999999999999999887654
No 71
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=298.02 Aligned_cols=285 Identities=17% Similarity=0.204 Sum_probs=249.0
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCC
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQP 524 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~ 524 (811)
.+|...|.+++| +++. +++++.||.|++||+.+++....+. .|...|.+++|+|++++|++++.||.|++|++....
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 92 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVY-TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATS 92 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEE-ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCT
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEee-cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecC
Confidence 678899999999 7776 6799999999999999998888887 899999999999999999999999999999996543
Q ss_pred c-cceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECC-CCCeEEEEECCCeEEEE
Q psy9770 525 T-GYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHP-SLSQFLTAGFDRIVQLW 602 (811)
Q Consensus 525 ~-~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp-~~~~l~s~s~dg~v~iw 602 (811)
. .....+..|...+.++.+ .+..+++++.++.|++|| .......+..|...+.++++.| ++.++++++.|+.|++|
T Consensus 93 ~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~ 170 (313)
T 3odt_A 93 GEDPLYTLIGHQGNVCSLSF-QDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLW 170 (313)
T ss_dssp TSCC-CEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred CCCcccchhhcccCEEEEEe-cCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEE
Confidence 2 235667789999999999 567899999999999999 4446667788999999999988 89999999999999999
Q ss_pred eCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcE
Q psy9770 603 DSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYI 682 (811)
Q Consensus 603 d~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I 682 (811)
|...........+...+.+++|+|++. +++++.||.|++||+.+++.+..+..|...|.+++|+|++ .|++++.||.|
T Consensus 171 d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v 248 (313)
T 3odt_A 171 QNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTV 248 (313)
T ss_dssp ETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEE
T ss_pred ecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEE
Confidence 943332222233788999999999998 9999999999999999999999999999999999999999 58899999999
Q ss_pred EEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCC
Q psy9770 683 YVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQ 741 (811)
Q Consensus 683 ~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~ 741 (811)
++||+.++ +.+..+..|...|.+++|+|+++ +++++.||.|++||+.+++.+..
T Consensus 249 ~iwd~~~~----~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 249 RIWSKENG----SLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EEECTTTC----CEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred EEEECCCC----ceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 99999886 46667788999999999999998 56788999999999998876654
No 72
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.6e-34 Score=315.10 Aligned_cols=349 Identities=14% Similarity=0.181 Sum_probs=251.4
Q ss_pred CCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecC-CCCCeEEEECCCcEEEEEEcCCceeeeeccc------ccccCC
Q psy9770 375 NDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHP-LDRNNIVTCGKSHINFWTIDAGGTLYKKQGI------FEMIRD 447 (811)
Q Consensus 375 ~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp-~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~------~~~l~~ 447 (811)
.++.+++|+++..+ ....+.+|.+.|.+++|+| ++..+++++.|+.|++|++.++......... .....+
T Consensus 21 ~~~~~~v~~~~~~~---~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
T 4a11_B 21 AESTRRVLGLELNK---DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDV 97 (408)
T ss_dssp HHHHHHHHTEEECT---TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTC
T ss_pred ccCcceeeccccCc---ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccccccccccc
Confidence 45678899998888 7888999999999999999 8887888888999999999866544332110 111135
Q ss_pred CCceEEEEEEcC-CCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecC---CcEEEEecCCCcEEEEeCCC
Q psy9770 448 KPKYVTCLAFTQ-GGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKE---GSIISAGGKDGRLLQFDSNL 522 (811)
Q Consensus 448 ~~~~v~~l~~s~-~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~d---g~~l~s~s~dg~I~~wd~~~ 522 (811)
|...|.+++|+| ++. +++++.||.|++||+.+++....+. +...+.++.+.+. +.++++++.||.|++||+..
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 888999999999 554 6799999999999999999888875 7888999999984 45999999999999999976
Q ss_pred CCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCC-eEEEEECCCeEEE
Q psy9770 523 QPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLS-QFLTAGFDRIVQL 601 (811)
Q Consensus 523 ~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~v~i 601 (811)
... ...+.+|...|.+++|+|+++ +|++++.||.|++
T Consensus 176 ~~~------------------------------------------~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i 213 (408)
T 4a11_B 176 GSC------------------------------------------SHILQGHRQEILAVSWSPRYDYILATASADSRVKL 213 (408)
T ss_dssp SCC------------------------------------------CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred cce------------------------------------------eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEE
Confidence 554 123446888999999999998 5899999999999
Q ss_pred EeCCCCc-EEEE----------------ecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCC-----CC
Q psy9770 602 WDSMSHS-VVWS----------------KDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDG-----NE 659 (811)
Q Consensus 602 wd~~~~~-~~~~----------------~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~-----~~ 659 (811)
||+.++. .+.. ..+...|.+++|+|++++|++++.||.|++||+.+++....+..+ ..
T Consensus 214 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 293 (408)
T 4a11_B 214 WDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKK 293 (408)
T ss_dssp EETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSS
T ss_pred EECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccc
Confidence 9998765 2222 246678999999999999999999999999999988765544322 11
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCccc
Q psy9770 660 PIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQI 739 (811)
Q Consensus 660 ~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~ 739 (811)
.+........+..+++++.++.|++||+.++ +.+..+.+|...|++++|+|++++|++++.||.|++||+.+++.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 294 GLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG----EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp CCCCEECCSSSSCEEEEEETTEEEEEETTTC----CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred cceeEEecCCCceEEEEecCCEEEEEECcCC----cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 2222223334556777788999999999886 567788999999999999999999999999999999999998876
Q ss_pred CCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecC-CCCEEEEEcCCCcEEEEeCCC
Q psy9770 740 PQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSH-DARVIATGDDFGKLKLYSYPA 802 (811)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~-dg~~Las~~~dg~v~vw~~~~ 802 (811)
....... .. ..+.+ +...+.+++.++.+++|+.+.
T Consensus 370 ~~~~~~~--------------------------~~--~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 370 PDDDETT--------------------------TK--SQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCCCceE--------------------------ec--cccccccceeecccCccCceeecCCcc
Confidence 5432110 01 11222 333455677889999999874
No 73
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.5e-33 Score=333.27 Aligned_cols=292 Identities=16% Similarity=0.221 Sum_probs=245.7
Q ss_pred EEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCC--cceEEEeeeCCCcEEEEEecCCCCCeEEEE
Q psy9770 342 VSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDR--GHKITETKCSVDTVVAAEFHPLDRNNIVTC 419 (811)
Q Consensus 342 ~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~--~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~ 419 (811)
...+. +|...|.+++|+| +++.+|++ ++.|++|+|||+.+... ......+.+|...|.+++|+|++..+++++
T Consensus 375 ~~~l~--~H~~~V~~v~~~~-~~~~~l~s--~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 375 KGTMR--AHTDMVTAIATPI-DNADIIVS--ASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp EEEEE--CCSSCEEEEECCT-TCCSEEEE--EETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred hhhcc--cCCceeEEEEecC-CCCCEEEE--EeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEe
Confidence 34455 9999999999998 35688888 79999999999986542 224677899999999999999888888888
Q ss_pred CCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEee--cccccceEE
Q psy9770 420 GKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIR--NVHEGSVFS 496 (811)
Q Consensus 420 ~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~--~~h~~~V~~ 496 (811)
.|+.|++||+.++..+... .+|...|.+++|+|++. +++++.|+.|++||........... .+|...|.+
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~-------~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 522 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRF-------VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSC 522 (694)
T ss_dssp TTSEEEEEETTTTEEEEEE-------ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEE
T ss_pred CCCcEEEEECCCCcceeEE-------eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEE
Confidence 8999999999977665543 56788899999999998 7799999999999987654433322 368889999
Q ss_pred EEEecCC--cEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeec
Q psy9770 497 ICVLKEG--SIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGH 574 (811)
Q Consensus 497 l~~s~dg--~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h 574 (811)
++|+|++ ..|++++.|+.|++||+..... ...+.+|
T Consensus 523 ~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~------------------------------------------~~~~~~h 560 (694)
T 3dm0_A 523 VRFSPNTLQPTIVSASWDKTVKVWNLSNCKL------------------------------------------RSTLAGH 560 (694)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTCCE------------------------------------------EEEECCC
T ss_pred EEEeCCCCcceEEEEeCCCeEEEEECCCCcE------------------------------------------EEEEcCC
Confidence 9999987 5899999999999999876543 1234578
Q ss_pred ccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEe
Q psy9770 575 TDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIH 654 (811)
Q Consensus 575 ~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~ 654 (811)
.+.|.+++|+|++++|++++.|+.|++||+.+++.+..+.....+.+++|+|++.+|+++. ++.|++||+.+++.+..+
T Consensus 561 ~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 561 TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhh
Confidence 9999999999999999999999999999999999988888888999999999998887765 567999999999887766
Q ss_pred cCCC-------------------CCeEEEEEccCCCEEEEEecCCcEEEEEec
Q psy9770 655 TDGN-------------------EPIQVVKFSPDGKLLALGSRDNYIYVYEVS 688 (811)
Q Consensus 655 ~~~~-------------------~~i~~i~~spdg~~lasgs~dg~I~iwd~~ 688 (811)
..+. ..+++++|+|||++|++|+.||.|+||++.
T Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 640 KVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 5321 137889999999999999999999999985
No 74
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.1e-33 Score=331.96 Aligned_cols=288 Identities=20% Similarity=0.306 Sum_probs=241.3
Q ss_pred EEeccCCCCeEEEEEcCCC-cEEEEeeccCCCCCCCCCeEEEEeCCCC-----cEEEEeccCCccccEEEEEEecCCCCc
Q psy9770 293 RHYLGHTDDIKCLSIHPNK-LLIATGQVAGHDAREGKPHIRIWNSVSL-----FTVSIIGIGEFERSISCLSFSKADGGT 366 (811)
Q Consensus 293 ~~~~~h~~~V~~la~spdg-~~Lasg~~dg~~~~~~~~~I~iWd~~t~-----~~~~~l~~~~h~~~V~~l~fs~~~dg~ 366 (811)
..+.+|.+.|+|++|+|++ .+||+|+.|+ .|+|||+.+. .....+. +|...|.+++|+| +|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~--------~i~~W~~~~~~~~~~~~~~~~~--~h~~~v~~v~~s~--~g~ 443 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDK--------SIILWKLTKDDKAYGVAQRRLT--GHSHFVEDVVLSS--DGQ 443 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTS--------EEEEEECCCSTTCSCEEEEEEE--CCSSCEEEEEECT--TSS
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCC--------cEEEEEccCCCcccccccceec--CCCCcEEEEEECC--CCC
Confidence 4578999999999999875 7999999999 9999999753 3455555 9999999999999 899
Q ss_pred EEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccC
Q psy9770 367 FLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIR 446 (811)
Q Consensus 367 ~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~ 446 (811)
+|++ ++.|++|+|||+.++. .+..+.+|...|.+++|+|++..+++++.|+.|++||.. +....... ....
T Consensus 444 ~l~s--gs~Dg~v~vwd~~~~~---~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~-~~~~~~~~---~~~~ 514 (694)
T 3dm0_A 444 FALS--GSWDGELRLWDLAAGV---STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTIS---EGGE 514 (694)
T ss_dssp EEEE--EETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEEEEC---SSTT
T ss_pred EEEE--EeCCCcEEEEECCCCc---ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC-CCcceeec---cCCC
Confidence 9998 7999999999999998 899999999999999999999999999999999999976 33322221 1125
Q ss_pred CCCceEEEEEEcCCCc---EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCC
Q psy9770 447 DKPKYVTCLAFTQGGE---VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQ 523 (811)
Q Consensus 447 ~~~~~v~~l~~s~~g~---llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~ 523 (811)
+|...|.|++|+|++. +++++.||.|++||+.+++....+. +|.+.|.+++|+|++++|++++.||.|++||+..+
T Consensus 515 ~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 515 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT
T ss_pred CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 6788899999999873 6799999999999999999988888 99999999999999999999999999999999765
Q ss_pred CccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEe
Q psy9770 524 PTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWD 603 (811)
Q Consensus 524 ~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd 603 (811)
.. ... ..+...|.+++|+|++.++++++ |+.|++||
T Consensus 594 ~~--~~~-----------------------------------------~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd 629 (694)
T 3dm0_A 594 KK--LYS-----------------------------------------LEANSVIHALCFSPNRYWLCAAT-EHGIKIWD 629 (694)
T ss_dssp EE--EEC-----------------------------------------CBCSSCEEEEEECSSSSEEEEEE-TTEEEEEE
T ss_pred ce--EEE-----------------------------------------ecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEE
Confidence 54 000 01334678889999887777665 55699999
Q ss_pred CCCCcEEEEecCC--------------------CCeEEEEEcCCCCEEEEEEeCCeEEEEecC
Q psy9770 604 SMSHSVVWSKDIA--------------------EQAQSATFSPDGSIIIVGCIAGRWLVMDSE 646 (811)
Q Consensus 604 ~~~~~~~~~~~~~--------------------~~v~~~~~spdg~~la~g~~dg~i~i~d~~ 646 (811)
+.+++.+..+... ..+.+++|+|+|++|++|+.||.|+|||+.
T Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 630 LESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp TTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 9888777654311 137889999999999999999999999985
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=309.44 Aligned_cols=312 Identities=11% Similarity=0.080 Sum_probs=240.1
Q ss_pred CCCCceEEEEEEcCCCc-EE-EEcC---CCcEEEEecCCceEEEEeecccccceEEEEEecC---CcEEEEecCCCcEEE
Q psy9770 446 RDKPKYVTCLAFTQGGE-VL-SGDS---NGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKE---GSIISAGGKDGRLLQ 517 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-ll-sg~~---dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~d---g~~l~s~s~dg~I~~ 517 (811)
.+|...|.+++|+|++. ++ +|+. ||.|++||+.+++........|...|.+++|+|+ +.+|++++.||.|++
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 94 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHI 94 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEE
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEE
Confidence 45788999999999986 54 6665 9999999999988766555479999999999998 699999999999999
Q ss_pred EeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEE------EECCCCCeEE
Q psy9770 518 FDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWAL------AAHPSLSQFL 591 (811)
Q Consensus 518 wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l------~~sp~~~~l~ 591 (811)
||+..... .. ..+.+|...|.++ +|+|++++|+
T Consensus 95 wd~~~~~~-~~----------------------------------------~~~~~~~~~v~~~~~~~~~~~s~~~~~l~ 133 (357)
T 3i2n_A 95 WNLEAPEM-PV----------------------------------------YSVKGHKEIINAIDGIGGLGIGEGAPEIV 133 (357)
T ss_dssp ECTTSCSS-CS----------------------------------------EEECCCSSCEEEEEEESGGGCC-CCCEEE
T ss_pred EeCCCCCc-cE----------------------------------------EEEEecccceEEEeeccccccCCCccEEE
Confidence 99987652 11 2234567777777 4578999999
Q ss_pred EEECCCeEEEEeCCCCc-EEEEec-C----CCCeEEEE----EcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCe
Q psy9770 592 TAGFDRIVQLWDSMSHS-VVWSKD-I----AEQAQSAT----FSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPI 661 (811)
Q Consensus 592 s~s~dg~v~iwd~~~~~-~~~~~~-~----~~~v~~~~----~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i 661 (811)
+++.|+.|++||+.+++ .+..+. + ...+.+++ |+|++.+|++++.||.|++||+.+++.... ..|...|
T Consensus 134 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v 212 (357)
T 3i2n_A 134 TGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGV 212 (357)
T ss_dssp EEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCE
T ss_pred EEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCce
Confidence 99999999999999876 455442 2 23788888 789999999999999999999999887554 5578899
Q ss_pred EEEEEcc---CCCEEEEEecCCcEEEEEecCCCcceeE-EEEecCCCCCeeEEEeCCCCC-eEEEecCCceEEEEECCCC
Q psy9770 662 QVVKFSP---DGKLLALGSRDNYIYVYEVSGDSRKYSR-VGRCTGHSSFITHLDWSEDSM-YIRSNSGDYELLYWNAGTC 736 (811)
Q Consensus 662 ~~i~~sp---dg~~lasgs~dg~I~iwd~~~~~~~~~~-~~~~~~h~~~V~~l~~spdg~-~L~s~s~Dg~i~iWd~~~~ 736 (811)
.+++|+| ++.+|++++.||.|++||+.++...... ...+.+|...|++++|+|+++ +|++++.||.|++||+.++
T Consensus 213 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 213 CSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred EEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 9999999 9999999999999999999875432211 224558999999999999998 8999999999999999876
Q ss_pred cccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEE-EEcCCCcEEEEeCCCCCC
Q psy9770 737 RQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIA-TGDDFGKLKLYSYPAVQP 805 (811)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~La-s~~~dg~v~vw~~~~~~~ 805 (811)
............... ......+.....|...|++++|+|++++|+ +++.||.|+||++...+.
T Consensus 293 ~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 293 IQRSKKDSEGIEMGV------AGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp SCC--CCTTSCCCCC------CCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cccccccCCCCcccc------ccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 644322110000000 000001111234788999999999999998 899999999999987654
No 76
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.6e-35 Score=320.10 Aligned_cols=311 Identities=11% Similarity=0.117 Sum_probs=230.5
Q ss_pred CCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCc--eEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCC
Q psy9770 448 KPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSN--TISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQP 524 (811)
Q Consensus 448 ~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~--~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~ 524 (811)
+...|.+++|+|+++ +++|+.||.|++||+.++ +....+. +|...|.+++|+|++++|++++.|+.|++||+....
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 345799999999999 558889999999999988 6777777 899999999999999999999999999999997655
Q ss_pred ccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeC
Q psy9770 525 TGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDS 604 (811)
Q Consensus 525 ~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~ 604 (811)
. . .....+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 89 ~-~--------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 129 (377)
T 3dwl_C 89 T-W--------------------------------------KQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYF 129 (377)
T ss_dssp C-C--------------------------------------CCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC
T ss_pred c-e--------------------------------------eeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEE
Confidence 1 0 001234568889999999999999999999999999999
Q ss_pred CCCcE---EEEe-c-CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecC------------------CcceeEEecCCCCCe
Q psy9770 605 MSHSV---VWSK-D-IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSE------------------TREAYSIHTDGNEPI 661 (811)
Q Consensus 605 ~~~~~---~~~~-~-~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~------------------~~~~~~~~~~~~~~i 661 (811)
.+++. ...+ . +...|.+++|+|++++|++++.||.|++||+. .++++..+ .|...|
T Consensus 130 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v 208 (377)
T 3dwl_C 130 EQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWV 208 (377)
T ss_dssp -----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSE
T ss_pred CCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceE
Confidence 98863 4443 3 78999999999999999999999999999985 35566667 899999
Q ss_pred EEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECC-CCcc-c
Q psy9770 662 QVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAG-TCRQ-I 739 (811)
Q Consensus 662 ~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~-~~~~-~ 739 (811)
.+++|+|+|++|++++.|+.|++||+.++......+..+.+|...|.+++|+|++++|++++.|+.+ +|+.. ++.. .
T Consensus 209 ~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~ 287 (377)
T 3dwl_C 209 HAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHT 287 (377)
T ss_dssp EEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCS
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEE
Confidence 9999999999999999999999999999865444466788999999999999999999999877766 56554 3311 1
Q ss_pred CCCCCcccee-------------------Eeccceeec-cce-----eeeCCCCCCCCccceEEecCCC-C---EEEEEc
Q psy9770 740 PQSSQLRDVV-------------------WESNSCTLT-FTT-----IGIWPEGADGTDVNSCERSHDA-R---VIATGD 790 (811)
Q Consensus 740 ~~~~~~~~~~-------------------~~~~~~~~~-~~~-----~~i~~~~~h~~~I~~l~~s~dg-~---~Las~~ 790 (811)
..+....... ++.....+. ... ...-....|...|+++++.++. . .|++|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g 367 (377)
T 3dwl_C 288 RDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSG 367 (377)
T ss_dssp BCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred eeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeec
Confidence 1111100000 000000000 000 0001123488999999976543 3 699999
Q ss_pred CCCcEEEEeC
Q psy9770 791 DFGKLKLYSY 800 (811)
Q Consensus 791 ~dg~v~vw~~ 800 (811)
.||.|+|||+
T Consensus 368 ~Dg~i~iWdl 377 (377)
T 3dwl_C 368 TDGRVVLWTL 377 (377)
T ss_dssp TTSEEEEECC
T ss_pred CCCcEEEecC
Confidence 9999999985
No 77
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.5e-33 Score=294.94 Aligned_cols=254 Identities=15% Similarity=0.267 Sum_probs=211.8
Q ss_pred ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCce
Q psy9770 489 VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFS 568 (811)
Q Consensus 489 ~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~ 568 (811)
+|.+.|.+++|+++|++|++|+.|++|++||+..... ...
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~----------------------------------------~~~ 46 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH----------------------------------------KLI 46 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB----------------------------------------CCC
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc----------------------------------------EEE
Confidence 8999999999999999999999999999999864321 012
Q ss_pred eeeeecccceEEEEECCC--CCeEEEEECCCeEEEEeCCCCc--EEEE-ecCCCCeEEEEEcCC--CCEEEEEEeCCeEE
Q psy9770 569 PVVLGHTDELWALAAHPS--LSQFLTAGFDRIVQLWDSMSHS--VVWS-KDIAEQAQSATFSPD--GSIIIVGCIAGRWL 641 (811)
Q Consensus 569 ~~~~~h~~~v~~l~~sp~--~~~l~s~s~dg~v~iwd~~~~~--~~~~-~~~~~~v~~~~~spd--g~~la~g~~dg~i~ 641 (811)
..+.+|.+.|.+++|+|+ +++|++++.|++|++||+.+++ .+.. ..+...|.+++|+|+ |.+|++++.||.|+
T Consensus 47 ~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~ 126 (297)
T 2pm7_B 47 DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVS 126 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred EEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEE
Confidence 345689999999999864 8899999999999999998774 3333 357789999999998 89999999999999
Q ss_pred EEecCCcc--eeEEecCCCCCeEEEEEccC-------------CCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCC
Q psy9770 642 VMDSETRE--AYSIHTDGNEPIQVVKFSPD-------------GKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSF 706 (811)
Q Consensus 642 i~d~~~~~--~~~~~~~~~~~i~~i~~spd-------------g~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~ 706 (811)
+||+.++. ....+.+|...|.+++|+|+ +++||+|+.|+.|+|||+..+...+.....+.+|...
T Consensus 127 ~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~ 206 (297)
T 2pm7_B 127 VVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (297)
T ss_dssp EEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc
Confidence 99998763 24567789999999999997 5799999999999999999876556677788999999
Q ss_pred eeEEEeCCCC---CeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCC
Q psy9770 707 ITHLDWSEDS---MYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDA 783 (811)
Q Consensus 707 V~~l~~spdg---~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg 783 (811)
|.+++|+|++ .+|++++.|++|++||+.++...... .+.....|...|.+++|+|+|
T Consensus 207 V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~--------------------~~~~~~~~~~~v~~~~~s~~g 266 (297)
T 2pm7_B 207 VRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKK--------------------TLLKEEKFPDVLWRASWSLSG 266 (297)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEE--------------------EESSSSCCSSCEEEEEECSSS
T ss_pred eEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccce--------------------eeeecccCCCcEEEEEECCCC
Confidence 9999999985 89999999999999999764311000 000112356789999999999
Q ss_pred CEEEEEcCCCcEEEEeCCC
Q psy9770 784 RVIATGDDFGKLKLYSYPA 802 (811)
Q Consensus 784 ~~Las~~~dg~v~vw~~~~ 802 (811)
++||+++.||+|+||+...
T Consensus 267 ~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 267 NVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCEEEEETTSCEEEEEECT
T ss_pred CEEEEEcCCCcEEEEEECC
Confidence 9999999999999999873
No 78
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.3e-33 Score=307.87 Aligned_cols=284 Identities=17% Similarity=0.234 Sum_probs=237.3
Q ss_pred CeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEE
Q psy9770 301 DIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNIS 380 (811)
Q Consensus 301 ~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~ 380 (811)
.+++|+||++ ++||+|. |+ +|+|||+.+|+.++.+.+.+|...|++|+|+| +|++|++ |+.|++|+
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~--------tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp--dg~~las--gs~Dg~v~ 172 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DN--------SVYLWSASSGDILQLLQMEQPGEYISSVAWIK--EGNYLAV--GTSSAEVQ 172 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TT--------EEEEEETTTCCEEEEEECCSTTCCEEEEEECT--TSSEEEE--EETTSCEE
T ss_pred cceeEEECCC-CEEEEEe-CC--------EEEEEECCCCCEEEEEEecCCCCcEEEEEECC--CCCEEEE--EECCCeEE
Confidence 4678999986 4888886 67 99999999999999888778899999999999 8999998 89999999
Q ss_pred EEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCC
Q psy9770 381 VWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQG 460 (811)
Q Consensus 381 vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~ 460 (811)
|||+++++ ++..+.+|...+.++. +++.
T Consensus 173 iWd~~~~~---~~~~~~~h~~~v~~~s-------------------------------------------------~~~~ 200 (420)
T 4gga_A 173 LWDVQQQK---RLRNMTSHSARVGSLS-------------------------------------------------WNSY 200 (420)
T ss_dssp EEETTTTE---EEEEECCCSSCEEEEE-------------------------------------------------EETT
T ss_pred EEEcCCCc---EEEEEeCCCCceEEEe-------------------------------------------------eCCC
Confidence 99999888 6666666655444443 3211
Q ss_pred CcEEEEcCCCcEEEEecCCce-EEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeE
Q psy9770 461 GEVLSGDSNGNIIVWTRGSNT-ISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIR 539 (811)
Q Consensus 461 g~llsg~~dg~I~vwd~~~~~-~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~ 539 (811)
.+++|+.|+.+++||..... .+..+. +|...+..+.+.+++.++++++.|+.+++|+........
T Consensus 201 -~l~sgs~d~~i~~~d~~~~~~~~~~~~-~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~------------ 266 (420)
T 4gga_A 201 -ILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW------------ 266 (420)
T ss_dssp -EEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS------------
T ss_pred -EEEEEeCCCceeEeeecccceeeEEec-ccccceeeeeecCCCCeeeeeeccccceEEeeccccccc------------
Confidence 24577788888888876543 344555 899999999999999999999999999999987654310
Q ss_pred EEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCC-eEEEE--ECCCeEEEEeCCCCcEEEEecCC
Q psy9770 540 TVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLS-QFLTA--GFDRIVQLWDSMSHSVVWSKDIA 616 (811)
Q Consensus 540 ~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~--s~dg~v~iwd~~~~~~~~~~~~~ 616 (811)
........|...|.+++|+|++. +++++ +.|++|++||+.++++...+...
T Consensus 267 --------------------------~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~ 320 (420)
T 4gga_A 267 --------------------------VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH 320 (420)
T ss_dssp --------------------------CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS
T ss_pred --------------------------eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc
Confidence 01123446888999999999765 44543 47999999999999999998888
Q ss_pred CCeEEEEEcCCCCEEEEEE--eCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCC
Q psy9770 617 EQAQSATFSPDGSIIIVGC--IAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGD 690 (811)
Q Consensus 617 ~~v~~~~~spdg~~la~g~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~ 690 (811)
..+.++.|+|++..+++++ .||.|+|||+.+++++..+.+|...|++++|+|||++||+|+.|++|+|||+.+.
T Consensus 321 ~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 321 SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999999999999998876 6899999999999999999999999999999999999999999999999999764
No 79
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.9e-33 Score=305.38 Aligned_cols=291 Identities=15% Similarity=0.155 Sum_probs=247.9
Q ss_pred eccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCc--EEEEeccCCccccEEEEEEecCCCCcEEEEEe
Q psy9770 295 YLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLF--TVSIIGIGEFERSISCLSFSKADGGTFLCAVD 372 (811)
Q Consensus 295 ~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~--~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~ 372 (811)
+..|...|.+++|+||+++||+|+.++ .|+|||+.+++ .+..+. +|...|.+++|+| ++++|++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~--------~v~i~~~~~~~~~~~~~~~--~h~~~v~~~~~~~--~~~~l~~-- 69 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNH--------EVHIYEKSGNKWVQVHELK--EHNGQVTGVDWAP--DSNRIVT-- 69 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSS--------EEEEEEEETTEEEEEEEEE--CCSSCEEEEEEET--TTTEEEE--
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCC--------EEEEEeCCCCcEEeeeeec--CCCCcccEEEEeC--CCCEEEE--
Confidence 456899999999999999999999999 99999999987 777776 8999999999999 8999998
Q ss_pred CCCCceEEEEEcccCCCcceEE--EeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCc
Q psy9770 373 EGNDYNISVWDWQKSDRGHKIT--ETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPK 450 (811)
Q Consensus 373 ~s~d~~i~vWd~~~~~~~~~~~--~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~ 450 (811)
++.|+.|++||+.+++ ... .+..|...|.+++|+|++..+++++.++.|++|++..+......... ...|..
T Consensus 70 ~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~---~~~~~~ 143 (372)
T 1k8k_C 70 CGTDRNAYVWTLKGRT---WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI---KKPIRS 143 (372)
T ss_dssp EETTSCEEEEEEETTE---EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE---CTTCCS
T ss_pred EcCCCeEEEEECCCCe---eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee---ecccCC
Confidence 6899999999998876 433 34678999999999999888888888999999999976532211111 145678
Q ss_pred eEEEEEEcCCCc-EEEEcCCCcEEEEec------------------CCceEEEEeecccccceEEEEEecCCcEEEEecC
Q psy9770 451 YVTCLAFTQGGE-VLSGDSNGNIIVWTR------------------GSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK 511 (811)
Q Consensus 451 ~v~~l~~s~~g~-llsg~~dg~I~vwd~------------------~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~ 511 (811)
.|.+++|+|++. +++++.||.|++||+ ..++....+. .|...|.+++|+|++++|++++.
T Consensus 144 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 222 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSH 222 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEET
T ss_pred CeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeC
Confidence 899999999998 569999999999995 4677888887 89999999999999999999999
Q ss_pred CCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccC--Cc----------------------
Q psy9770 512 DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNL--GF---------------------- 567 (811)
Q Consensus 512 dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~--~~---------------------- 567 (811)
||.|++||+..... ...+..+...+.++++++++.+++++.++.|++|++.. +.
T Consensus 223 d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (372)
T 1k8k_C 223 DSTVCLADADKKMA--VATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARE 300 (372)
T ss_dssp TTEEEEEEGGGTTE--EEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHH
T ss_pred CCEEEEEECCCCce--eEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhh
Confidence 99999999987765 56667888899999999999988888999999999987 31
Q ss_pred ------------------eeeeeecccceEEEEEC-CCC---CeEEEEECCCeEEEEeCCCCc
Q psy9770 568 ------------------SPVVLGHTDELWALAAH-PSL---SQFLTAGFDRIVQLWDSMSHS 608 (811)
Q Consensus 568 ------------------~~~~~~h~~~v~~l~~s-p~~---~~l~s~s~dg~v~iwd~~~~~ 608 (811)
.....+|...|.+++|+ +++ .+|++++.||.|++||+.+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 301 RFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp HHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred hhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 12224899999999966 666 899999999999999987644
No 80
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.8e-33 Score=304.98 Aligned_cols=308 Identities=12% Similarity=0.077 Sum_probs=223.4
Q ss_pred CCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCc--------EEEEeccCCccccEEEEEEecCCCCcEEEE
Q psy9770 299 TDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLF--------TVSIIGIGEFERSISCLSFSKADGGTFLCA 370 (811)
Q Consensus 299 ~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~--------~~~~l~~~~h~~~V~~l~fs~~~dg~~Las 370 (811)
..+|.|++|+|||++||+|+.+. ...+.+..|+||++.... ....+.+.+|...|.+++|+. ..+++
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~-~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~----~~~~~ 88 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGE-GNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK----GIILV 88 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCS-SSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET----TEEEE
T ss_pred CCCEEEEEEeCCCcEEEEECCCc-cccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC----CEEEE
Confidence 45899999999999999997543 111223379999987543 233344568888999888765 55554
Q ss_pred EeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecc--cccccCCC
Q psy9770 371 VDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQG--IFEMIRDK 448 (811)
Q Consensus 371 v~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~--~~~~l~~~ 448 (811)
+..++...+|.. ..++.+++|++........... .+.....+
T Consensus 89 --g~~~~~~~l~s~----------------------------------~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (365)
T 4h5i_A 89 --GCNENSTKITQG----------------------------------KGNKHLRKFKYDKVNDQLEFLTSVDFDASTNA 132 (365)
T ss_dssp --ECCCCHHHHHHT----------------------------------SCCCCEEEEEEETTTTEEEEEEEECSSCCCCT
T ss_pred --EECCCccEEEEe----------------------------------cCCCcEEEEEecCCCceEEEeeeeceeecCCc
Confidence 333322222211 1123334444332221111100 01111344
Q ss_pred CceEEEEEEcCCCcE-E--EEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCc
Q psy9770 449 PKYVTCLAFTQGGEV-L--SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPT 525 (811)
Q Consensus 449 ~~~v~~l~~s~~g~l-l--sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~ 525 (811)
...+.+++|+|||++ + +++.|+.|+|||+.+++.+..+. |.+.|.+++|+|||++|++++.+ .+++|+...+..
T Consensus 133 ~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~ 209 (365)
T 4h5i_A 133 DDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSC 209 (365)
T ss_dssp TCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCE
T ss_pred ccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEeccce-eEEEEEeccCcc
Confidence 566899999999994 3 44578999999999999988875 88899999999999999988855 556666544433
Q ss_pred cceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCC----eEEE
Q psy9770 526 GYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDR----IVQL 601 (811)
Q Consensus 526 ~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg----~v~i 601 (811)
.. .....+|...|.+++|+|++.++++++.|+ .+++
T Consensus 210 ~~----------------------------------------~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 210 IA----------------------------------------RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EE----------------------------------------EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred ee----------------------------------------eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 00 012335778899999999999999999887 6889
Q ss_pred EeCCCCcEEE-----EecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEe-cCCCCCeEEEEEccCCCEEEE
Q psy9770 602 WDSMSHSVVW-----SKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIH-TDGNEPIQVVKFSPDGKLLAL 675 (811)
Q Consensus 602 wd~~~~~~~~-----~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~-~~~~~~i~~i~~spdg~~las 675 (811)
|++....... ...+...|++++|+|||++||+|+.|+.|+|||+.+++++..+ .+|...|++++|||||++||+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEE
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEE
Confidence 9987765322 2456788999999999999999999999999999999998875 789999999999999999999
Q ss_pred EecCCcEEEEEecCC
Q psy9770 676 GSRDNYIYVYEVSGD 690 (811)
Q Consensus 676 gs~dg~I~iwd~~~~ 690 (811)
|+.|++|+||++..+
T Consensus 330 ~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 330 VSAANTIHIIKLPLN 344 (365)
T ss_dssp EETTSEEEEEECCTT
T ss_pred EeCCCeEEEEEcCCC
Confidence 999999999999754
No 81
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.7e-34 Score=317.82 Aligned_cols=289 Identities=12% Similarity=0.087 Sum_probs=229.3
Q ss_pred ccccceEEEEEec-CCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCC--CCeEEEEeCCCeEEEEEccC
Q psy9770 489 VHEGSVFSICVLK-EGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGR--GSQLIVGTTRNCILVGSLNL 565 (811)
Q Consensus 489 ~h~~~V~~l~~s~-dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~l~~~~~~~~i~~~d~~~ 565 (811)
.|...|++|+|+| ++++|++|+.||.|++||+..........+.+|.+.|.+++|+| +..|++++.|+.|++||+..
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG 196 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence 7889999999998 56799999999999999998776645566778999999999986 35788899999999999988
Q ss_pred Cceeeeeec---ccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCC-EEEEEEeCCeEE
Q psy9770 566 GFSPVVLGH---TDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGS-IIIVGCIAGRWL 641 (811)
Q Consensus 566 ~~~~~~~~h---~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~-~la~g~~dg~i~ 641 (811)
.....+..+ ...+.+++|+|++.+|++|+.||.|++||+..........|...|.+++|+|++. +|++|+.|+.|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 197 NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 765554433 3367899999999999999999999999997655444456788999999999986 788899999999
Q ss_pred EEecCCcceeEE---ecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCC------CeeEEEe
Q psy9770 642 VMDSETREAYSI---HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSS------FITHLDW 712 (811)
Q Consensus 642 i~d~~~~~~~~~---~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~------~V~~l~~ 712 (811)
+||+.+.+.... ..+|...|++++|+|||++|++++.||.|+|||+.++... ..+..|.. .+..+.|
T Consensus 277 iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 352 (435)
T 4e54_B 277 IWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP----LGLIPHPHRHFQHLTPIKAAW 352 (435)
T ss_dssp EEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE----EEECCCCCCCCSSSCCCBCEE
T ss_pred EEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc----eEEecccccccccceeEEEEE
Confidence 999988764433 3578899999999999999999999999999999886432 23333332 2334567
Q ss_pred CCCCCeEEEec------------CCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceE-Ee
Q psy9770 713 SEDSMYIRSNS------------GDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSC-ER 779 (811)
Q Consensus 713 spdg~~L~s~s------------~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l-~~ 779 (811)
+|++.++++++ .++.|++||..+++.+..+. ..|...|.++ +|
T Consensus 353 ~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~------------------------~~~~~~v~s~~~f 408 (435)
T 4e54_B 353 HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY------------------------DPESSGISSLNEF 408 (435)
T ss_dssp CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC------------------------CSSCCCCCCEEEE
T ss_pred cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe------------------------CCCCCcEEEEEEE
Confidence 77666666553 34579999999987665321 2356778887 69
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCCCC
Q psy9770 780 SHDARVIATGDDFGKLKLYSYPAVQPK 806 (811)
Q Consensus 780 s~dg~~Las~~~dg~v~vw~~~~~~~~ 806 (811)
+|+|++||+|+ |++|+||++..++++
T Consensus 409 spdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 409 NPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp CTTSSCEEEEC-SSEEEECCCC-----
T ss_pred CCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 99999999987 678999999998875
No 82
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=309.11 Aligned_cols=359 Identities=14% Similarity=0.113 Sum_probs=252.1
Q ss_pred eEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEe----------eeC
Q psy9770 330 HIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITET----------KCS 399 (811)
Q Consensus 330 ~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~----------~~~ 399 (811)
.++||++..++....+. +|...|.+++|+| .+|++|++ ++.|+.|++||+.++......... ..|
T Consensus 24 ~~~v~~~~~~~~~~~~~--~h~~~v~~~~~s~-~~~~~l~~--~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
T 4a11_B 24 TRRVLGLELNKDRDVER--IHGGGINTLDIEP-VEGRYMLS--GGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVH 98 (408)
T ss_dssp HHHHHTEEECTTEEECC--CCSSCEEEEEECT-TTCCEEEE--EETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCC
T ss_pred cceeeccccCcceeeee--ccCCcEEEEEEec-CCCCEEEE--EcCCCeEEEEECCCCcccceEeccccccccccccccC
Confidence 67889998888888876 8999999999998 36789988 789999999999988722222111 248
Q ss_pred CCcEEEEEecCCCC-CeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc----EEEEcCCCcEEE
Q psy9770 400 VDTVVAAEFHPLDR-NNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE----VLSGDSNGNIIV 474 (811)
Q Consensus 400 ~~~V~~v~fsp~~~-~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~----llsg~~dg~I~v 474 (811)
...|.+++|+|++. .+++++.|+.|++|++.++...... .+...+.++.|.+.+. +++++.+|.|++
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF--------NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQL 170 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE--------ECSSCEEEEEECSSCSSCCEEEEEESSSSEEE
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec--------cCCCceeeeEeecCCCCCcEEEEEcCCCeEEE
Confidence 99999999999544 5555566999999999976555443 2445689999988543 569999999999
Q ss_pred EecCCceEEEEeecccccceEEEEEecCCc-EEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEe
Q psy9770 475 WTRGSNTISKFIRNVHEGSVFSICVLKEGS-IISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGT 553 (811)
Q Consensus 475 wd~~~~~~~~~~~~~h~~~V~~l~~s~dg~-~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~ 553 (811)
||+.+++....+. .|...|.+++|+|++. +|++++.||.|++||+..... ....+..+...
T Consensus 171 ~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~---------------- 232 (408)
T 4a11_B 171 CDLKSGSCSHILQ-GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASG-CLITLDQHNGK---------------- 232 (408)
T ss_dssp EESSSSCCCEEEC-CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSC-CSEECCTTTTC----------------
T ss_pred EeCCCcceeeeec-CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCc-ccccccccccc----------------
Confidence 9999999888888 8999999999999998 588999999999999986653 11222111110
Q ss_pred CCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecC------CCCeEEEEEcCC
Q psy9770 554 TRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDI------AEQAQSATFSPD 627 (811)
Q Consensus 554 ~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~------~~~v~~~~~spd 627 (811)
...........|...|.+++|+|++++|++++.|+.|++||+.+++....... ...+........
T Consensus 233 ---------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (408)
T 4a11_B 233 ---------KSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGC 303 (408)
T ss_dssp ---------SCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSS
T ss_pred ---------cceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCC
Confidence 00012233457899999999999999999999999999999998876543211 112222223344
Q ss_pred CCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCe
Q psy9770 628 GSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFI 707 (811)
Q Consensus 628 g~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V 707 (811)
+..+++++.++.|++||+.+++.+..+.+|...|++++|+|++++|++++.||.|++|++.+.+ .+.....+.
T Consensus 304 ~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~----~~~~~~~~~--- 376 (408)
T 4a11_B 304 SSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE----PVPDDDETT--- 376 (408)
T ss_dssp SSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------
T ss_pred CceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC----ccCCCCceE---
Confidence 5667777889999999999999999999999999999999999999999999999999999863 222222111
Q ss_pred eEEEeCC-CCCeEEEecCCceEEEEECCC
Q psy9770 708 THLDWSE-DSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 708 ~~l~~sp-dg~~L~s~s~Dg~i~iWd~~~ 735 (811)
....+.+ +...+.+.+.|+.+++|+...
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 377 TKSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp -----------------------------
T ss_pred eccccccccceeecccCccCceeecCCcc
Confidence 1223333 334556777899999998653
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=290.14 Aligned_cols=294 Identities=13% Similarity=0.208 Sum_probs=249.7
Q ss_pred eEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEE
Q psy9770 292 QRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAV 371 (811)
Q Consensus 292 ~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv 371 (811)
.+.+.+|.+.|.+++| |++.+||+|+.|| .|+|||+.+++....+. .|...|.+++|+| ++.+|++
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg--------~v~vw~~~~~~~~~~~~--~~~~~v~~~~~~~--~~~~l~~- 76 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDG--------TVRLWSKDDQWLGTVVY--TGQGFLNSVCYDS--EKELLLF- 76 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTS--------EEEEEEESSSEEEEEEE--ECSSCEEEEEEET--TTTEEEE-
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCC--------cEEEEECCCCEEEEEee--cCCccEEEEEECC--CCCEEEE-
Confidence 3668899999999999 9999999999999 99999999999888887 8999999999999 8999998
Q ss_pred eCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCce
Q psy9770 372 DEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKY 451 (811)
Q Consensus 372 ~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~ 451 (811)
++.|+.|++|++........+..+..|...|.++.|. +..+++++.++.|++|| .+...... ..|...
T Consensus 77 -~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~~~d--~~~~~~~~-------~~~~~~ 144 (313)
T 3odt_A 77 -GGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVVISGSWDKTAKVWK--EGSLVYNL-------QAHNAS 144 (313)
T ss_dssp -EETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEE--TTEEEEEE-------ECCSSC
T ss_pred -ecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CCEEEEEeCCCCEEEEc--CCcEEEec-------ccCCCc
Confidence 7899999999998765444788889999999999994 66777778899999999 34444433 456778
Q ss_pred EEEEEEcC-CCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCcccee
Q psy9770 452 VTCLAFTQ-GGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEA 529 (811)
Q Consensus 452 v~~l~~s~-~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~ 529 (811)
+.+++|.+ ++. +++++.||.|++|| ..+....+...|...|.+++|++++. +++++.||.|++||+..... ..
T Consensus 145 v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~--~~ 219 (313)
T 3odt_A 145 VWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDV--LR 219 (313)
T ss_dssp EEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCE--EE
T ss_pred eeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhh--hh
Confidence 99999988 666 66999999999999 45666666644999999999999998 88899999999999987765 56
Q ss_pred eeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCC-ceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCc
Q psy9770 530 QIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLG-FSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHS 608 (811)
Q Consensus 530 ~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~-~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~ 608 (811)
.+..|...+.++++++++.+++++.++.|++||+.++ ....+..|...|.+++|+|+++ +++++.|+.|++||+.+++
T Consensus 220 ~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 220 TYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGG
T ss_pred hhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCc
Confidence 6778999999999999999999999999999999876 4566778999999999999998 6679999999999999887
Q ss_pred EEEEecCCC
Q psy9770 609 VVWSKDIAE 617 (811)
Q Consensus 609 ~~~~~~~~~ 617 (811)
.........
T Consensus 299 ~~~~~~~~~ 307 (313)
T 3odt_A 299 WASEDEIKG 307 (313)
T ss_dssp CCC------
T ss_pred eeehhhhhh
Confidence 765544443
No 84
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-35 Score=318.73 Aligned_cols=320 Identities=16% Similarity=0.175 Sum_probs=253.8
Q ss_pred CccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEE
Q psy9770 349 EFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWT 428 (811)
Q Consensus 349 ~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd 428 (811)
.....|.+++||| ||+++|+ ++.|++|+ |.+.++ .+ .+|...|..++|+|++ .++.+.+|+
T Consensus 13 ~~~~~v~sv~~Sp--DG~~iAS--as~D~TV~--d~~~~~---~l---~gh~~~v~~V~FsPdg-------~~~~~~~~~ 73 (588)
T 2j04_A 13 EFEDWKNNLTWAR--DGTLYLT--TFPDISIG--QPKYAK---DI---NCNSKNLFHVKEFPLE-------FENKLDFEL 73 (588)
T ss_dssp CCSSSSCCEEECT--TSCEEEE--CSSSEEEE--EECCCS---CC---SSBGGGTEEEEEECCC-------CCCTTTTSC
T ss_pred HhhccEEEEEECC--CCCEEEE--EcCCceee--cccccc---ee---cCCCccEEEEEECCCC-------CcceEEEEe
Confidence 5678999999999 9999999 89999999 755554 33 7899999999999977 455556665
Q ss_pred EcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeeccccc-----ceEEEEEecC
Q psy9770 429 IDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEG-----SVFSICVLKE 502 (811)
Q Consensus 429 ~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~-----~V~~l~~s~d 502 (811)
.+ +..+.. ..+...|.+++|+|+|. +++++.||.|++||.++ ++..+. |.. .|.+++|+||
T Consensus 74 ~~-~~~~~~--------~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~--~~~~~~~~sv~svafSPD 140 (588)
T 2j04_A 74 AQ-QNGLLN--------SQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD--SKGNLSSRTYHCFEWNPI 140 (588)
T ss_dssp CC-SSCSST--------TSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC--CSSCSTTTCEEEEEECSS
T ss_pred CC-CceEee--------cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc--CCCccccccEEEEEEcCC
Confidence 44 222211 13357899999999999 77999999999999654 555444 444 5999999999
Q ss_pred CcEEEEecCCCcEEEEeCCCCCccc-----eeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccc
Q psy9770 503 GSIISAGGKDGRLLQFDSNLQPTGY-----EAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDE 577 (811)
Q Consensus 503 g~~l~s~s~dg~I~~wd~~~~~~~~-----~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~ 577 (811)
|++|++|+.||+|++||+..+.... ...+.. ...+|...
T Consensus 141 G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~------------------------------------~~~gh~~~ 184 (588)
T 2j04_A 141 ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRL------------------------------------SDAGSKDW 184 (588)
T ss_dssp SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEEC------------------------------------SCTTCCCC
T ss_pred CCEEEEEcCCCEEEEEECCCCccccccceeeeeeec------------------------------------cccccccc
Confidence 9999999999999999998764300 011100 12467889
Q ss_pred eEEEEECCCCCeEEEEECCCeEEEEeCCCCcEE---EEe--cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeE
Q psy9770 578 LWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVV---WSK--DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYS 652 (811)
Q Consensus 578 v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~---~~~--~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~ 652 (811)
|.+++|+|++ +++++.|++|++||+.++... ..+ .+...|.+++|+ |..||+++ ++.|++||+.+++...
T Consensus 185 V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~ 259 (588)
T 2j04_A 185 VTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISS 259 (588)
T ss_dssp EEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEE
T ss_pred EEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEE
Confidence 9999999999 888999999999999887742 233 466789999999 68899887 6999999999888755
Q ss_pred EecCCCCCeEEEEE--ccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEE
Q psy9770 653 IHTDGNEPIQVVKF--SPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLY 730 (811)
Q Consensus 653 ~~~~~~~~i~~i~~--spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~i 730 (811)
...+|...|..++| +||+..|++++.||+ ++|..+ .++|+||+..+++. |+++++
T Consensus 260 ~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d--------------------~~~~spd~~l~a~~--d~~v~l 316 (588)
T 2j04_A 260 LKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED--------------------ELHVTADNIIAPYL--EKKFKK 316 (588)
T ss_dssp EECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS--------------------SEEEECCCSSHHHH--HHHHHH
T ss_pred EEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec--------------------cEEECCCceEEEEc--CCEEEE
Confidence 55479999999999 999999999999999 999876 15699999988875 999999
Q ss_pred EECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcC
Q psy9770 731 WNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDD 791 (811)
Q Consensus 731 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~ 791 (811)
|+...+. +..+. +...|.+|+|||||+++|+++.
T Consensus 317 W~~~g~~-l~~~~--------------------------~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 317 WSTIWNE-FNNYE--------------------------TTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp TTTTTTS-SSSSC--------------------------CEEEEEEEEECTTSSEEEEEEE
T ss_pred EECCCCc-eeeec--------------------------cceEEEEEEECCCCCEEEEEEe
Confidence 9875443 33222 1345999999999999998864
No 85
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.4e-33 Score=313.95 Aligned_cols=293 Identities=16% Similarity=0.179 Sum_probs=227.6
Q ss_pred EEEeeeCCCcEEEEEecCCCCCeE-EEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcC-CCc-EEEEcCC
Q psy9770 393 ITETKCSVDTVVAAEFHPLDRNNI-VTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQ-GGE-VLSGDSN 469 (811)
Q Consensus 393 ~~~~~~~~~~V~~v~fsp~~~~ll-~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~-~g~-llsg~~d 469 (811)
......|...|++++|+|.++.++ +++.||.|++||+.++...... .+.+|...|.+++|+| ++. +++|+.|
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~-----~~~gH~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI-----KGIGAGGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE-----CCCSSSCCCCEEEECSSCTTEEEEECSS
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE-----EccCCCCCEEEEEEeCCCCCEEEEEeCC
Confidence 344567888999999999766555 4556999999999865433222 1267889999999998 555 6799999
Q ss_pred CcEEEEecCCceEEEEee-cccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCe
Q psy9770 470 GNIIVWTRGSNTISKFIR-NVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQ 548 (811)
Q Consensus 470 g~I~vwd~~~~~~~~~~~-~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 548 (811)
|+|++||++++....... ..+...+.+++|++++.+|++|+.||.|++||++....
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~----------------------- 243 (435)
T 4e54_B 187 GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL----------------------- 243 (435)
T ss_dssp SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC-----------------------
T ss_pred CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee-----------------------
Confidence 999999998765544433 12344678999999999999999999999999864332
Q ss_pred EEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCC-eEEEEECCCeEEEEeCCCCcEEEE----ecCCCCeEEEE
Q psy9770 549 LIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLS-QFLTAGFDRIVQLWDSMSHSVVWS----KDIAEQAQSAT 623 (811)
Q Consensus 549 l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~v~iwd~~~~~~~~~----~~~~~~v~~~~ 623 (811)
..+.+|...|.+++|+|++. +|++++.|+.|++||+.+.+.... ..|...|.+++
T Consensus 244 --------------------~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 303 (435)
T 4e54_B 244 --------------------WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAAC 303 (435)
T ss_dssp --------------------CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECC
T ss_pred --------------------EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccccccee
Confidence 23457888999999999886 788999999999999987654322 45778999999
Q ss_pred EcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCC------CeEEEEEccCCCEEEEEe------------cCCcEEEE
Q psy9770 624 FSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNE------PIQVVKFSPDGKLLALGS------------RDNYIYVY 685 (811)
Q Consensus 624 ~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~------~i~~i~~spdg~~lasgs------------~dg~I~iw 685 (811)
|+|+|.+|++++.||.|+|||+.+++....+..|.. .+..+.|+|++.++++++ .++.|++|
T Consensus 304 ~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iw 383 (435)
T 4e54_B 304 FSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVF 383 (435)
T ss_dssp BCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEE
T ss_pred ECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEE
Confidence 999999999999999999999999988777665532 234457788777777764 23579999
Q ss_pred EecCCCcceeEEEEe-cCCCCCeeEE-EeCCCCCeEEEecCCceEEEEECCCCcc
Q psy9770 686 EVSGDSRKYSRVGRC-TGHSSFITHL-DWSEDSMYIRSNSGDYELLYWNAGTCRQ 738 (811)
Q Consensus 686 d~~~~~~~~~~~~~~-~~h~~~V~~l-~~spdg~~L~s~s~Dg~i~iWd~~~~~~ 738 (811)
|..++. .+..+ .+|...|.++ +|+|+|++|++|+ |+.|+||++++++.
T Consensus 384 d~~~g~----~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 384 DGNSGK----MMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CSSSCC----EEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred ECCCCc----EEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 998873 44443 5788889887 6999999999876 78999999998874
No 86
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-32 Score=300.88 Aligned_cols=285 Identities=19% Similarity=0.282 Sum_probs=244.3
Q ss_pred eEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceee
Q psy9770 451 YVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ 530 (811)
Q Consensus 451 ~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~ 530 (811)
.+.++.|++ +.+++++.||.|++||+.+++....+...|...|.+++|+|++++|++|+.||.|++||+..... ...
T Consensus 95 ~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~--~~~ 171 (401)
T 4aez_A 95 YLNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK--LRT 171 (401)
T ss_dssp TCBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE--EEE
T ss_pred eEEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeE--EEE
Confidence 356688886 45888999999999999999988888756899999999999999999999999999999987765 566
Q ss_pred eccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCC--ceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCc
Q psy9770 531 IAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLG--FSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHS 608 (811)
Q Consensus 531 ~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~--~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~ 608 (811)
+..|...|.++++. +..+++++.++.|++||+... ....+.+|...|.+++|+|++.+|++++.|+.|++||+.+++
T Consensus 172 ~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 172 MAGHQARVGCLSWN-RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI 250 (401)
T ss_dssp ECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS
T ss_pred ecCCCCceEEEEEC-CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC
Confidence 77899999999994 568999999999999999843 456678899999999999999999999999999999999998
Q ss_pred EEEEe-cCCCCeEEEEEcCCCC-EEEEEE--eCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEe--cCCcE
Q psy9770 609 VVWSK-DIAEQAQSATFSPDGS-IIIVGC--IAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGS--RDNYI 682 (811)
Q Consensus 609 ~~~~~-~~~~~v~~~~~spdg~-~la~g~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs--~dg~I 682 (811)
.+..+ .+...|.+++|+|++. ++++++ .||.|++||+.+++.+..+. +...|.+++|+|++++|++++ .||.|
T Consensus 251 ~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i 329 (401)
T 4aez_A 251 PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNL 329 (401)
T ss_dssp EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEE
T ss_pred ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcE
Confidence 88775 5788999999999775 555544 69999999999999988886 567899999999999999954 89999
Q ss_pred EEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCC
Q psy9770 683 YVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQS 742 (811)
Q Consensus 683 ~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~ 742 (811)
++|++.++. ......+.+|...|.+++|+|++++|++++.||.|++|++.+++.+...
T Consensus 330 ~v~~~~~~~--~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 330 SIWSYSSSG--LTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEEEETTE--EEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred EEEecCCcc--ceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 999998853 2344457899999999999999999999999999999999998877654
No 87
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.8e-32 Score=286.84 Aligned_cols=282 Identities=17% Similarity=0.243 Sum_probs=235.2
Q ss_pred eEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEE
Q psy9770 302 IKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISV 381 (811)
Q Consensus 302 V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~v 381 (811)
.++|+||+++ +||+|. |+ +|+|||+.++++++.+.+.+|...|.+++|+| +|++|++ |+.|++|++
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~--------tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~--~~~~l~s--gs~Dg~v~i 93 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DN--------SVYLWSASSGDILQLLQMEQPGEYISSVAWIK--EGNYLAV--GTSSAEVQL 93 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TT--------EEEEEETTTCCEEEEEECCSTTCCEEEEEECT--TSSEEEE--EETTSEEEE
T ss_pred ceEEEECCCC-EEEEEe-CC--------EEEEEECCCCCEEEEEEecCCCCeEEEEEECC--CCCEEEE--EECCCcEEE
Confidence 5789999987 788875 67 99999999999999988778999999999999 8999998 899999999
Q ss_pred EEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCC
Q psy9770 382 WDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGG 461 (811)
Q Consensus 382 Wd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g 461 (811)
||+++++ ++..+.+|...+.++.+. +
T Consensus 94 w~~~~~~---~~~~~~~h~~~~~~~~~~---------------------------------------------------~ 119 (318)
T 4ggc_A 94 WDVQQQK---RLRNMTSHSARVGSLSWN---------------------------------------------------S 119 (318)
T ss_dssp EETTTTE---EEEEEECCSSCEEEEEEE---------------------------------------------------T
T ss_pred eecCCce---eEEEecCccceEEEeecC---------------------------------------------------C
Confidence 9999988 777776665544333222 2
Q ss_pred c-EEEEcCCCcEEEEecCCce-EEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeE
Q psy9770 462 E-VLSGDSNGNIIVWTRGSNT-ISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIR 539 (811)
Q Consensus 462 ~-llsg~~dg~I~vwd~~~~~-~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~ 539 (811)
. +++++.++.+++|+..... ....+. +|...+..+.+.+++++|++++.||.|++||+..++....
T Consensus 120 ~~l~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~----------- 187 (318)
T 4ggc_A 120 YILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV----------- 187 (318)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSC-----------
T ss_pred CEEEEEecCCceEeeecCCCceeEEEEc-CccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccc-----------
Confidence 2 4577788888888877654 334455 8999999999999999999999999999999986654110
Q ss_pred EEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeE---EEEECCCeEEEEeCCCCcEEEEecCC
Q psy9770 540 TVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQF---LTAGFDRIVQLWDSMSHSVVWSKDIA 616 (811)
Q Consensus 540 ~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l---~s~s~dg~v~iwd~~~~~~~~~~~~~ 616 (811)
.......|.+.|.+++++|++..+ ++++.++.|++||...........+.
T Consensus 188 ---------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~ 240 (318)
T 4ggc_A 188 ---------------------------PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH 240 (318)
T ss_dssp ---------------------------CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS
T ss_pred ---------------------------ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce
Confidence 112234567788899998877643 35667899999999999998888889
Q ss_pred CCeEEEEEcCCCCEEEEEE--eCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCC
Q psy9770 617 EQAQSATFSPDGSIIIVGC--IAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGD 690 (811)
Q Consensus 617 ~~v~~~~~spdg~~la~g~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~ 690 (811)
..+..+.|+|++..+++++ .||.|++||+.+++++..+.+|...|++++|+|||++||+|+.||+|+|||+.+.
T Consensus 241 ~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 241 SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred eeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999999999999988765 6899999999999999999999999999999999999999999999999998763
No 88
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=318.03 Aligned_cols=320 Identities=11% Similarity=0.054 Sum_probs=253.0
Q ss_pred CCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCc
Q psy9770 298 HTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDY 377 (811)
Q Consensus 298 h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~ 377 (811)
-...|.+++|+|||+++|+++.|+ +|+ |...++.+ . +|...|.+++|+| +| .++
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~--------TV~--d~~~~~~l---~--gh~~~v~~V~FsP--dg---------~~~ 67 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDI--------SIG--QPKYAKDI---N--CNSKNLFHVKEFP--LE---------FEN 67 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSE--------EEE--EECCCSCC---S--SBGGGTEEEEEEC--CC---------CCC
T ss_pred hhccEEEEEECCCCCEEEEEcCCc--------eee--ccccccee---c--CCCccEEEEEECC--CC---------Ccc
Confidence 357899999999999999999999 999 76555543 4 8999999999999 66 355
Q ss_pred eEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEE
Q psy9770 378 NISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAF 457 (811)
Q Consensus 378 ~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~ 457 (811)
.+.+|+.+... +..+ .|...|.+++|+|+|..+++++.+|.|++|+.+ + .+.... ... .-....+.+++|
T Consensus 68 ~~~~~~~~~~~----~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~-~-~l~~l~--~~~-~~~~~sv~svaf 137 (588)
T 2j04_A 68 KLDFELAQQNG----LLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN-K-MLTNLD--SKG-NLSSRTYHCFEW 137 (588)
T ss_dssp TTTTSCCCSSC----SSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETT-E-EEEECC--CSS-CSTTTCEEEEEE
T ss_pred eEEEEeCCCce----Eeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC-c-eeeecc--CCC-ccccccEEEEEE
Confidence 66666654322 2222 447899999999999999999999999999954 2 222211 000 001235999999
Q ss_pred cCCCc-EEEEcCCCcEEEEecCCce-------EEEEee---cccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCcc
Q psy9770 458 TQGGE-VLSGDSNGNIIVWTRGSNT-------ISKFIR---NVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTG 526 (811)
Q Consensus 458 s~~g~-llsg~~dg~I~vwd~~~~~-------~~~~~~---~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~ 526 (811)
+|||+ +++|+.||+|++||+.++. .+..+. .+|...|.+++|+||| +++++.|+.|++||+..+...
T Consensus 138 SPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 138 NPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ 215 (588)
T ss_dssp CSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc
Confidence 99999 6699999999999999875 245552 3788999999999999 677899999999999877752
Q ss_pred -ceeee-ccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeee-ecccceEEEEE--CCCCCeEEEEECCCeEEE
Q psy9770 527 -YEAQI-AEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL-GHTDELWALAA--HPSLSQFLTAGFDRIVQL 601 (811)
Q Consensus 527 -~~~~~-~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~-~h~~~v~~l~~--sp~~~~l~s~s~dg~v~i 601 (811)
....+ ..|...|..++|+ +..+++++ ++.|++||+.++....+. +|...|..++| +|++..+++++.||+ ++
T Consensus 216 ~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-kl 292 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KV 292 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EE
T ss_pred cceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EE
Confidence 12334 4677899999998 66666665 699999999988774444 99999999999 999999999999999 99
Q ss_pred EeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEe
Q psy9770 602 WDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGS 677 (811)
Q Consensus 602 wd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs 677 (811)
|... .++++||+..++.. |+++++|+...+. +..+.+ ...|.+++|||||+.+|+++
T Consensus 293 w~~d---------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 293 LLED---------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp EESS---------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEE
T ss_pred Eeec---------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEE
Confidence 9977 26699999888774 9999999976544 444544 66799999999999999985
No 89
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.8e-32 Score=286.87 Aligned_cols=247 Identities=14% Similarity=0.195 Sum_probs=209.0
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCC--ceEEEEeecccccceEEEEEec--CCcEEEEecCCCcEEEEeC
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGS--NTISKFIRNVHEGSVFSICVLK--EGSIISAGGKDGRLLQFDS 520 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~--~~~~~~~~~~h~~~V~~l~~s~--dg~~l~s~s~dg~I~~wd~ 520 (811)
.+|...|.+++|+|+|+ +++|+.||.|++||+.. .+.+..+. +|.+.|.+++|++ ++++|++++.|++|++||+
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~-gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc-cccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 67889999999999998 56999999999999974 35667777 9999999999986 4899999999999999998
Q ss_pred CCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCC--CCeEEEEECCCe
Q psy9770 521 NLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPS--LSQFLTAGFDRI 598 (811)
Q Consensus 521 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~--~~~l~s~s~dg~ 598 (811)
..+... ....+.+|...|.+++|+|+ +.+|++++.|+.
T Consensus 85 ~~~~~~----------------------------------------~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~ 124 (297)
T 2pm7_B 85 ENGRWS----------------------------------------QIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGK 124 (297)
T ss_dssp SSSCBC----------------------------------------CCEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred CCCceE----------------------------------------EEEEeecCCCceeEEEeCcCCCCcEEEEEECCCc
Confidence 765320 01223468889999999997 889999999999
Q ss_pred EEEEeCCCCc---EEEEecCCCCeEEEEEcCC-------------CCEEEEEEeCCeEEEEecCCcc----eeEEecCCC
Q psy9770 599 VQLWDSMSHS---VVWSKDIAEQAQSATFSPD-------------GSIIIVGCIAGRWLVMDSETRE----AYSIHTDGN 658 (811)
Q Consensus 599 v~iwd~~~~~---~~~~~~~~~~v~~~~~spd-------------g~~la~g~~dg~i~i~d~~~~~----~~~~~~~~~ 658 (811)
|++||+.++. ......|...|.+++|+|+ +++|++|+.|+.|++||+.+++ ....+.+|.
T Consensus 125 v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~ 204 (297)
T 2pm7_B 125 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 204 (297)
T ss_dssp EEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC
Confidence 9999998763 2333567889999999997 5799999999999999998765 567788999
Q ss_pred CCeEEEEEccCC---CEEEEEecCCcEEEEEecCCCcceeEEEEe--cCCCCCeeEEEeCCCCCeEEEecCCceEEEEEC
Q psy9770 659 EPIQVVKFSPDG---KLLALGSRDNYIYVYEVSGDSRKYSRVGRC--TGHSSFITHLDWSEDSMYIRSNSGDYELLYWNA 733 (811)
Q Consensus 659 ~~i~~i~~spdg---~~lasgs~dg~I~iwd~~~~~~~~~~~~~~--~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~ 733 (811)
..|.+++|+|++ .+||+++.|++|+|||+......... ..+ .+|...|.+++|+|++++|++++.||.|++|+.
T Consensus 205 ~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 205 DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKK-TLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEE-EESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccce-eeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 999999999995 89999999999999999875322211 122 578899999999999999999999999999997
Q ss_pred C
Q psy9770 734 G 734 (811)
Q Consensus 734 ~ 734 (811)
.
T Consensus 284 ~ 284 (297)
T 2pm7_B 284 N 284 (297)
T ss_dssp C
T ss_pred C
Confidence 6
No 90
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.3e-34 Score=309.77 Aligned_cols=292 Identities=12% Similarity=0.136 Sum_probs=225.2
Q ss_pred EEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCc--eeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCC
Q psy9770 394 TETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGG--TLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNG 470 (811)
Q Consensus 394 ~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~--~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg 470 (811)
..+..+.++|.+++|+|++..+++++.|+.|++|++.++. .+. .+.+|...|.+++|+|++. +++++.||
T Consensus 5 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~-------~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 77 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR-------TFSDHDKIVTCVDWAPKSNRIVTCSQDR 77 (377)
T ss_dssp EEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC-------CBCCCSSCEEEEEECTTTCCEEEEETTS
T ss_pred eeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE-------EEecCCceEEEEEEeCCCCEEEEEeCCC
Confidence 3445577899999999987777766679999999999652 222 2256888999999999988 67999999
Q ss_pred cEEEEecCCce---EEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCC
Q psy9770 471 NIIVWTRGSNT---ISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGS 547 (811)
Q Consensus 471 ~I~vwd~~~~~---~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 547 (811)
.|++||+.+++ ....+. .|...|.+++|+|++++|++++.|+.|++||++......
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-------------------- 136 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLL-RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW-------------------- 136 (377)
T ss_dssp SEEEC------CCCCEEECC-CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC--------------------
T ss_pred eEEEEEcCCCCceeeeeEec-ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce--------------------
Confidence 99999999877 455555 799999999999999999999999999999997654200
Q ss_pred eEEEEeCCCeEEEEEccCCceeeeee-cccceEEEEECCCCCeEEEEECCCeEEEEeCCC------------------Cc
Q psy9770 548 QLIVGTTRNCILVGSLNLGFSPVVLG-HTDELWALAAHPSLSQFLTAGFDRIVQLWDSMS------------------HS 608 (811)
Q Consensus 548 ~l~~~~~~~~i~~~d~~~~~~~~~~~-h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~------------------~~ 608 (811)
....+.+ |...|.+++|+|++++|++++.|+.|++||+.. ++
T Consensus 137 -------------------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T 3dwl_C 137 -------------------VSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNT 197 (377)
T ss_dssp -------------------CCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEE
T ss_pred -------------------eeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhh
Confidence 0122334 888999999999999999999999999999852 44
Q ss_pred EEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcce----eEEecCCCCCeEEEEEccCCCEEEEEecCCcEEE
Q psy9770 609 VVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREA----YSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYV 684 (811)
Q Consensus 609 ~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~i 684 (811)
++..+.+...|.+++|+|+|++|++++.||.|++||+.+++. +..+..|...|.+++|+|+|++|++|+.++.+ +
T Consensus 198 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~ 276 (377)
T 3dwl_C 198 VCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-L 276 (377)
T ss_dssp EEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-E
T ss_pred hhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-E
Confidence 455557788999999999999999999999999999999987 78888999999999999999999998766655 7
Q ss_pred EEecCCCcc--------------------------e---------eEEE-------------EecCCCCCeeEEEeCCCC
Q psy9770 685 YEVSGDSRK--------------------------Y---------SRVG-------------RCTGHSSFITHLDWSEDS 716 (811)
Q Consensus 685 wd~~~~~~~--------------------------~---------~~~~-------------~~~~h~~~V~~l~~spdg 716 (811)
|+....... . .... ....|...|+++++.++.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~ 356 (377)
T 3dwl_C 277 LQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGT 356 (377)
T ss_dssp ECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEE
T ss_pred EEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCC
Confidence 766532100 0 0000 012399999999976643
Q ss_pred -C---eEEEecCCceEEEEEC
Q psy9770 717 -M---YIRSNSGDYELLYWNA 733 (811)
Q Consensus 717 -~---~L~s~s~Dg~i~iWd~ 733 (811)
. .|+|++.||.|++||+
T Consensus 357 ~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 357 PGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp TTEEEEEEEEETTSEEEEECC
T ss_pred CCceEEEEeecCCCcEEEecC
Confidence 3 6999999999999985
No 91
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=2e-31 Score=329.05 Aligned_cols=473 Identities=13% Similarity=0.039 Sum_probs=347.0
Q ss_pred CCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeC----
Q psy9770 298 HTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDE---- 373 (811)
Q Consensus 298 h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~---- 373 (811)
+...+.+.+||| ++||.++. + .|.+|++.+++... +. .|...+.+++||| ||++||+.+.
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~-~--------~l~~~~~~gg~~~~-lt--~~~~~v~~~~~SP--DG~~la~~s~~~~~ 76 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCC-D--------DLWEHDLKSGSTRK-IV--SNLGVINNARFFP--DGRKIAIRVMRGSS 76 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEET-T--------EEEEEETTTCCEEE-EE--CSSSEEEEEEECT--TSSEEEEEEEESTT
T ss_pred ccceEeCcEEeC--CEEEEEEC-C--------cEEEEECCCCcEEE-ee--eCCCcccCeEECC--CCCEEEEEEeeccC
Confidence 467899999996 47888775 4 89999999887654 33 7999999999999 9999997532
Q ss_pred CCCceEEEEEcccCCCcceEEEeeeCCCcE-------EEEEecCCCCCeEEEEC-C----C--cEEEEEEcCCceeeeec
Q psy9770 374 GNDYNISVWDWQKSDRGHKITETKCSVDTV-------VAAEFHPLDRNNIVTCG-K----S--HINFWTIDAGGTLYKKQ 439 (811)
Q Consensus 374 s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V-------~~v~fsp~~~~ll~~~~-d----~--~i~iwd~~~~~~~~~~~ 439 (811)
..+..|++||+.+++ ...+..|...+ ..++|+|++. +++++. + + .|..|++..+.. ....
T Consensus 77 ~~~~~i~~~d~~~g~----~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~-~~l~ 150 (1045)
T 1k32_A 77 LNTADLYFYNGENGE----IKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINF-VPLN 150 (1045)
T ss_dssp CCEEEEEEEETTTTE----EEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEE-EECC
T ss_pred CCCCeEEEEECCCCC----eEEcccCCCcccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCe-EEec
Confidence 245689999998765 67788888888 9999999887 666555 2 2 477777664432 1110
Q ss_pred -------------------------------------------ccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEe
Q psy9770 440 -------------------------------------------GIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWT 476 (811)
Q Consensus 440 -------------------------------------------~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd 476 (811)
+.+..+.+|...+.++.|+++.-++++..+|.+.||.
T Consensus 151 ~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~ 230 (1045)
T 1k32_A 151 LGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYS 230 (1045)
T ss_dssp SCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEE
T ss_pred CCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEE
Confidence 0011123466778889999883245788889999997
Q ss_pred cCC-ceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeecc-----------ccCCeEEEeeC
Q psy9770 477 RGS-NTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAE-----------HLGGIRTVSEG 544 (811)
Q Consensus 477 ~~~-~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~-----------~~~~v~~l~~~ 544 (811)
+.. +.....+. .|. .+..++|+|||+.|+.+ .++.|++||+..... ..+.. +...+..++++
T Consensus 231 ~~~~g~~~~~l~-~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l---~~l~~~~~~~~~~~~~~~~~v~~~~~S 304 (1045)
T 1k32_A 231 TDLDGKDLRKHT-SFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKI---EKIEIGDLESPEDRIISIPSKFAEDFS 304 (1045)
T ss_dssp EETTSCSCEECC-CCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCE---EECCCCCCCBCCSEEEECGGGGEEEEE
T ss_pred EeCCCCcceEec-CCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEe---eeeccCcccccccccccccccceeeec
Confidence 643 33334444 343 46678999999988876 589999999854433 23332 33468899999
Q ss_pred -CCCeEEEEeCCCeEEEEEccCCceeeeeeccc-ceEEEEECCCCCeEEEEECCCeEE-EEeCCCCcEEEEecCCCCeEE
Q psy9770 545 -RGSQLIVGTTRNCILVGSLNLGFSPVVLGHTD-ELWALAAHPSLSQFLTAGFDRIVQ-LWDSMSHSVVWSKDIAEQAQS 621 (811)
Q Consensus 545 -~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~-~v~~l~~sp~~~~l~s~s~dg~v~-iwd~~~~~~~~~~~~~~~v~~ 621 (811)
|++..++...++.+++|++..+....+..|.. .+..++|+ +++.|++++.++.+. +||+.+++......+...+..
T Consensus 305 ~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~ 383 (1045)
T 1k32_A 305 PLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFA 383 (1045)
T ss_dssp ECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEE
T ss_pred CCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceee
Confidence 99876655558999999998877666777887 89999999 999999999988898 999988876555556678999
Q ss_pred EEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCC----------cEEEEEecCCC
Q psy9770 622 ATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDN----------YIYVYEVSGDS 691 (811)
Q Consensus 622 ~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg----------~I~iwd~~~~~ 691 (811)
++|+|||++|++++.++.|++||+.+++.......|...+..++|||||++|++++.++ .|++||+.++
T Consensus 384 ~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g- 462 (1045)
T 1k32_A 384 MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR- 462 (1045)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT-
T ss_pred eEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC-
Confidence 99999999999999999999999999998888878888999999999999999887654 8999999875
Q ss_pred cceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccc--eeEecccee-------------
Q psy9770 692 RKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRD--VVWESNSCT------------- 756 (811)
Q Consensus 692 ~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~--~~~~~~~~~------------- 756 (811)
+ +..+..|...+..++|+|||++|++++.++...+|+.......... ..+. +.+......
T Consensus 463 ---~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (1045)
T 1k32_A 463 ---K-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEV-VSKPFVIPLIPGSPNPTKLVPRSMTSEA 537 (1045)
T ss_dssp ---E-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCS-CBEEEEEESSTTCCCGGGCCCGGGSCCC
T ss_pred ---c-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcccccccc-CceeEEEEeCCCCCCccccCcCcccccc
Confidence 2 4567788888999999999999999999888888986543321110 0000 000000000
Q ss_pred --eccce--eeeCCCCCCCCccceEEecCCCCEEEE-------------EcCCCcEEEEeCCCCCC
Q psy9770 757 --LTFTT--IGIWPEGADGTDVNSCERSHDARVIAT-------------GDDFGKLKLYSYPAVQP 805 (811)
Q Consensus 757 --~~~~~--~~i~~~~~h~~~I~~l~~s~dg~~Las-------------~~~dg~v~vw~~~~~~~ 805 (811)
..+.. ..+.....+...+..++|+|||+++++ .+....|.+||+.+++.
T Consensus 538 ~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~ 603 (1045)
T 1k32_A 538 GEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV 603 (1045)
T ss_dssp CCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE
T ss_pred ccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcE
Confidence 00000 011122235677899999999998885 12345788888877653
No 92
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.2e-31 Score=296.87 Aligned_cols=286 Identities=14% Similarity=0.198 Sum_probs=236.8
Q ss_pred CccceEEccCCcEEEEeccEEEEEeCCCCceEE---eccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCC
Q psy9770 262 CRSNLYLLPTGEIVYFVAAVAVLYNVEEQTQRH---YLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVS 338 (811)
Q Consensus 262 ~~~~l~~spdg~~l~~~~~~i~i~d~~~~~~~~---~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t 338 (811)
..+.|+||+++.+.+..++.|+|||+.+++... +.+|...|+||+|+|||++||+|+.|| .|+|||+.+
T Consensus 107 y~~~l~wS~~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg--------~v~iWd~~~ 178 (420)
T 4gga_A 107 YLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDVQQ 178 (420)
T ss_dssp TCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------CEEEEETTT
T ss_pred cceeEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC--------eEEEEEcCC
Confidence 357799998764433447999999999987543 346788999999999999999999999 999999999
Q ss_pred CcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEE
Q psy9770 339 LFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVT 418 (811)
Q Consensus 339 ~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~ 418 (811)
++.+..+. +|...|.++++++ .+|++ ++.|+.+++||...... .+..+.+|...+..+.|+|++..++++
T Consensus 179 ~~~~~~~~--~h~~~v~~~s~~~----~~l~s--gs~d~~i~~~d~~~~~~--~~~~~~~h~~~~~~~~~~~~g~~l~s~ 248 (420)
T 4gga_A 179 QKRLRNMT--SHSARVGSLSWNS----YILSS--GSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDGRHLASG 248 (420)
T ss_dssp TEEEEEEC--CCSSCEEEEEEET----TEEEE--EETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred CcEEEEEe--CCCCceEEEeeCC----CEEEE--EeCCCceeEeeecccce--eeEEecccccceeeeeecCCCCeeeee
Confidence 99999987 9999999998864 78887 79999999999987552 677889999999999999998888888
Q ss_pred ECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE---EEcCCCcEEEEecCCceEEEEeecccccce
Q psy9770 419 CGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL---SGDSNGNIIVWTRGSNTISKFIRNVHEGSV 494 (811)
Q Consensus 419 ~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll---sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V 494 (811)
+.|+.+++|+..++...... ......|...|.+++|+|++. ++ +|+.|+.|++||+.+++....+. +...+
T Consensus 249 ~~D~~v~i~~~~~~~~~~~~---~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--~~~~v 323 (420)
T 4gga_A 249 GNDNLVNVWPSAPGEGGWVP---LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQV 323 (420)
T ss_dssp ETTSCEEEEESSCCSSCSCC---SEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--CSSCE
T ss_pred eccccceEEeecccccccee---eeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec--cccce
Confidence 88999999999865432221 112256778899999999876 33 35689999999999999998886 55679
Q ss_pred EEEEEecCCcEEEEec--CCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeee
Q psy9770 495 FSICVLKEGSIISAGG--KDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL 572 (811)
Q Consensus 495 ~~l~~s~dg~~l~s~s--~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~ 572 (811)
.++.|+++++.+++++ .|+.|++||+.+... ...+.
T Consensus 324 ~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~------------------------------------------v~~l~ 361 (420)
T 4gga_A 324 CSILWSPHYKELISGHGFAQNQLVIWKYPTMAK------------------------------------------VAELK 361 (420)
T ss_dssp EEEEEETTTTEEEEEECTTTCCEEEEETTTCCE------------------------------------------EEEEC
T ss_pred eeeeecCCCCeEEEEEecCCCEEEEEECCCCcE------------------------------------------EEEEc
Confidence 9999999998887654 789999999876554 12356
Q ss_pred ecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEE
Q psy9770 573 GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWS 612 (811)
Q Consensus 573 ~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~ 612 (811)
+|.+.|.+++|+|++.+|++|+.|++|+|||+.+..+...
T Consensus 362 gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 362 GHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccch
Confidence 8999999999999999999999999999999987654433
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-32 Score=300.77 Aligned_cols=284 Identities=17% Similarity=0.246 Sum_probs=236.0
Q ss_pred Ccccc--EEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeee-CCCcEEEEEecCCCCCeEEEECCCcEE
Q psy9770 349 EFERS--ISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKC-SVDTVVAAEFHPLDRNNIVTCGKSHIN 425 (811)
Q Consensus 349 ~h~~~--V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~-~~~~V~~v~fsp~~~~ll~~~~d~~i~ 425 (811)
+|... +.+++|++ ..+++ ++.|+.|++||+.+++ ....+.. |...|.+++|+|++..+++++.++.|+
T Consensus 89 ~~~~~~~~~~~~~s~----~~l~~--~~~d~~v~lw~~~~~~---~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~ 159 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN----LNVVA--VALERNVYVWNADSGS---VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVD 159 (401)
T ss_dssp TCCCCTTCBCEEECT----TSEEE--EEETTEEEEEETTTCC---EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCcCCceEEEEeecC----CCEEE--EECCCeEEEeeCCCCc---EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEE
Confidence 55554 45566664 33444 4789999999999998 6666665 788999999999888888888899999
Q ss_pred EEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecC-CceEEEEeecccccceEEEEEecCCc
Q psy9770 426 FWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRG-SNTISKFIRNVHEGSVFSICVLKEGS 504 (811)
Q Consensus 426 iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~-~~~~~~~~~~~h~~~V~~l~~s~dg~ 504 (811)
+|++.++..+... .+|...|.+++|.+ ..+++++.||.|++||+. .+.....+. .|.+.|.+++|+|++.
T Consensus 160 iwd~~~~~~~~~~-------~~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 230 (401)
T 4aez_A 160 IYDVESQTKLRTM-------AGHQARVGCLSWNR-HVLSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGLAWRSDGL 230 (401)
T ss_dssp EEETTTCCEEEEE-------CCCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSS
T ss_pred EEECcCCeEEEEe-------cCCCCceEEEEECC-CEEEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEEEEcCCCC
Confidence 9999977666554 56778899999953 247799999999999998 456666676 8999999999999999
Q ss_pred EEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEEC
Q psy9770 505 IISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAH 584 (811)
Q Consensus 505 ~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~s 584 (811)
+|++++.||.|++||+..... ...+..|...|.+++|+
T Consensus 231 ~l~s~~~d~~v~iwd~~~~~~------------------------------------------~~~~~~~~~~v~~~~~~ 268 (401)
T 4aez_A 231 QLASGGNDNVVQIWDARSSIP------------------------------------------KFTKTNHNAAVKAVAWC 268 (401)
T ss_dssp EEEEEETTSCEEEEETTCSSE------------------------------------------EEEECCCSSCCCEEEEC
T ss_pred EEEEEeCCCeEEEccCCCCCc------------------------------------------cEEecCCcceEEEEEEC
Confidence 999999999999999986443 12234688889999999
Q ss_pred CCCC-eEEEEE--CCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE--eCCeEEEEecCCcceeE--EecCC
Q psy9770 585 PSLS-QFLTAG--FDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGC--IAGRWLVMDSETREAYS--IHTDG 657 (811)
Q Consensus 585 p~~~-~l~s~s--~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~--~dg~i~i~d~~~~~~~~--~~~~~ 657 (811)
|++. ++++++ .|+.|++||+.+++.+..+.+...+.+++|+|+++++++++ .||.|++||+.+++... .+.+|
T Consensus 269 p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h 348 (401)
T 4aez_A 269 PWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH 348 (401)
T ss_dssp TTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECC
T ss_pred CCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCC
Confidence 9775 555554 69999999999999999988899999999999999999954 89999999999865444 46789
Q ss_pred CCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCc
Q psy9770 658 NEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR 692 (811)
Q Consensus 658 ~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~ 692 (811)
...|.+++|+|+|++|++++.||.|++|++.++..
T Consensus 349 ~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 349 DTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp SSCCCEEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 99999999999999999999999999999998743
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.3e-32 Score=293.39 Aligned_cols=281 Identities=11% Similarity=0.103 Sum_probs=237.0
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCce---EEEEeecccccceEEEEEecCCc-EEEEecCCCcEEEEeC
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNT---ISKFIRNVHEGSVFSICVLKEGS-IISAGGKDGRLLQFDS 520 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~---~~~~~~~~h~~~V~~l~~s~dg~-~l~s~s~dg~I~~wd~ 520 (811)
.+|...|.+++|+|++. +++++.||.|++|++.++. ....+. .|...|.+++|+|+++ +|++++.||.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 56888999999999988 6699999999999998776 233444 7999999999999999 9999999999999998
Q ss_pred -CCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeee--cccceEEEEECCCCCeEEEEECCC
Q psy9770 521 -NLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLG--HTDELWALAAHPSLSQFLTAGFDR 597 (811)
Q Consensus 521 -~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~--h~~~v~~l~~sp~~~~l~s~s~dg 597 (811)
..... ..+.+ |...|.+++|+| +.+|++++.|+
T Consensus 87 ~~~~~~-------------------------------------------~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~ 122 (342)
T 1yfq_A 87 IGSPSF-------------------------------------------QALTNNEANLGICRICKYG-DDKLIAASWDG 122 (342)
T ss_dssp SSSSSE-------------------------------------------EECBSCCCCSCEEEEEEET-TTEEEEEETTS
T ss_pred ccCCce-------------------------------------------EeccccCCCCceEEEEeCC-CCEEEEEcCCC
Confidence 65432 12345 888999999999 99999999999
Q ss_pred eEEEEeCCC---------CcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCC-cc--eeEEecCCCCCeEEEE
Q psy9770 598 IVQLWDSMS---------HSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSET-RE--AYSIHTDGNEPIQVVK 665 (811)
Q Consensus 598 ~v~iwd~~~---------~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~-~~--~~~~~~~~~~~i~~i~ 665 (811)
.|++||+.+ ++++..+.+...+.+++|+|++ +++++.+|.|++||+.+ +. .......+...|.+++
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~ 200 (342)
T 1yfq_A 123 LIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVA 200 (342)
T ss_dssp EEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEE
T ss_pred eEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEE
Confidence 999999987 7766667788999999999988 99999999999999998 54 3345556788999999
Q ss_pred Ecc-CCCEEEEEecCCcEEEEEecCC--CcceeEEEEecCCCC---------CeeEEEeCCCCCeEEEecCCceEEEEEC
Q psy9770 666 FSP-DGKLLALGSRDNYIYVYEVSGD--SRKYSRVGRCTGHSS---------FITHLDWSEDSMYIRSNSGDYELLYWNA 733 (811)
Q Consensus 666 ~sp-dg~~lasgs~dg~I~iwd~~~~--~~~~~~~~~~~~h~~---------~V~~l~~spdg~~L~s~s~Dg~i~iWd~ 733 (811)
|+| ++++|++++.||.|++|++... .........+.+|.. .|++++|+|++++|++++.||.|++||+
T Consensus 201 ~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 201 LLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp ECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred ECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 999 9999999999999999999876 111123344566654 9999999999999999999999999999
Q ss_pred CCCcccCCCCCccceeEeccceeeccceeeeCCCCCC-CCccceEEecCCCCEEEEEcCCCc-EEEEeC
Q psy9770 734 GTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGAD-GTDVNSCERSHDARVIATGDDFGK-LKLYSY 800 (811)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h-~~~I~~l~~s~dg~~Las~~~dg~-v~vw~~ 800 (811)
.+++.+..+. .| ...|++++ |++++|++|+.||+ .+.|.+
T Consensus 281 ~~~~~~~~~~-------------------------~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 281 QTRKKIKNFA-------------------------KFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp TTTEEEEECC-------------------------CCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred ccHhHhhhhh-------------------------cccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 9988665432 34 77899999 99999999999999 666664
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.2e-32 Score=305.31 Aligned_cols=343 Identities=13% Similarity=0.166 Sum_probs=236.2
Q ss_pred CCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCce-----------EEEEeecccc------------cceEEEEEecC
Q psy9770 447 DKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNT-----------ISKFIRNVHE------------GSVFSICVLKE 502 (811)
Q Consensus 447 ~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~-----------~~~~~~~~h~------------~~V~~l~~s~d 502 (811)
.+...|.+++|+|+|. +++|+.||.|++||+.+++ ....+. +|. ..|.+++|+|+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEcCC
Confidence 3567899999999998 5599999999999998776 466777 898 88999999999
Q ss_pred C--cEEEEecCCCcEEEEeCCCCCccc-eeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceee-eeecccce
Q psy9770 503 G--SIISAGGKDGRLLQFDSNLQPTGY-EAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPV-VLGHTDEL 578 (811)
Q Consensus 503 g--~~l~s~s~dg~I~~wd~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~-~~~h~~~v 578 (811)
+ ..|++++.|+.|++||+....... ...+..+.+.+........-.+-.....+ +......... ..+|...|
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMD----LMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEE----EEEEEEEEEEECSCCSSCC
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchh----eeeeccceEEeccCCCcce
Confidence 8 789999999999999987543310 01111111111100000000000000000 1111111122 35799999
Q ss_pred EEEEECCCCCeEEEEECCCeEEEEeCCC-CcEEEE--------ecCCCCeEEEEEcCCC-CEEEEEEeCCeEEEEecCCc
Q psy9770 579 WALAAHPSLSQFLTAGFDRIVQLWDSMS-HSVVWS--------KDIAEQAQSATFSPDG-SIIIVGCIAGRWLVMDSETR 648 (811)
Q Consensus 579 ~~l~~sp~~~~l~s~s~dg~v~iwd~~~-~~~~~~--------~~~~~~v~~~~~spdg-~~la~g~~dg~i~i~d~~~~ 648 (811)
.+++|+|++++|+++ .|+.|++||+.+ ++.+.. ..+...|.+++|+|++ .+|++|+.||.|++||+.++
T Consensus 181 ~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 181 NSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp CEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred EEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 999999999999998 899999999984 444442 2577889999999998 99999999999999999998
Q ss_pred ce----eEEecCCCC------------CeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCC------
Q psy9770 649 EA----YSIHTDGNE------------PIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSF------ 706 (811)
Q Consensus 649 ~~----~~~~~~~~~------------~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~------ 706 (811)
+. +..+..|.. .|.+++|+|+|++|++++. +.|+|||+.... ..+..+.+|...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~---~~~~~~~~~~~~~~~l~~ 335 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMEN---RPVETYQVHEYLRSKLCS 335 (447)
T ss_dssp SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCS---SCSCCEESCGGGTTTHHH
T ss_pred ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCc---cccceeeccccccccccc
Confidence 87 788888876 8999999999999999998 999999998632 234455666532
Q ss_pred ---------eeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCC---CccceeEeccceeeccc----eeeeCCCCCC
Q psy9770 707 ---------ITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSS---QLRDVVWESNSCTLTFT----TIGIWPEGAD 770 (811)
Q Consensus 707 ---------V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~i~~~~~h 770 (811)
+..++|+|++++|++++.||.|++||+.+++.+.... ..+.............. ..........
T Consensus 336 ~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (447)
T 3dw8_B 336 LYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDF 415 (447)
T ss_dssp HHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCT
T ss_pred cccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccccccccccc
Confidence 3349999999999999999999999999987653110 00000000000000000 0000011124
Q ss_pred CCccceEEecCCCCEEEEEcCCCcEEEEeC
Q psy9770 771 GTDVNSCERSHDARVIATGDDFGKLKLYSY 800 (811)
Q Consensus 771 ~~~I~~l~~s~dg~~Las~~~dg~v~vw~~ 800 (811)
...|.+++|+|++++||+++.++ +++|.-
T Consensus 416 ~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 416 NKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp TSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred CCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 56799999999999999999876 888863
No 96
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.7e-30 Score=273.99 Aligned_cols=280 Identities=14% Similarity=0.185 Sum_probs=231.9
Q ss_pred ccceEEccCCcEEEEeccEEEEEeCCCCceEE---eccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCC
Q psy9770 263 RSNLYLLPTGEIVYFVAAVAVLYNVEEQTQRH---YLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSL 339 (811)
Q Consensus 263 ~~~l~~spdg~~l~~~~~~i~i~d~~~~~~~~---~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~ 339 (811)
.+.|+||+++-+.+..++.|+|||+.+++... +.+|...|.+++|+|++++||+|+.|| .|+|||+.++
T Consensus 28 ~~~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg--------~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------EEEEEETTTT
T ss_pred ceEEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC--------cEEEeecCCc
Confidence 36799999884433346899999999987533 346888999999999999999999999 9999999999
Q ss_pred cEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEE
Q psy9770 340 FTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTC 419 (811)
Q Consensus 340 ~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~ 419 (811)
+.+..+. +|...+.++.+.+ .+|++ ++.++.+.+|+...... .+..+.+|...+..+.|.+++..+++++
T Consensus 100 ~~~~~~~--~h~~~~~~~~~~~----~~l~s--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 169 (318)
T 4ggc_A 100 KRLRNMT--SHSARVGSLSWNS----YILSS--GSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDGRHLASGG 169 (318)
T ss_dssp EEEEEEE--CCSSCEEEEEEET----TEEEE--EETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eeEEEec--CccceEEEeecCC----CEEEE--EecCCceEeeecCCCce--eEEEEcCccCceEEEEEcCCCCEEEEEe
Confidence 9999987 8999988876654 78887 78999999999987652 6778899999999999999888888888
Q ss_pred CCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-E---EEEcCCCcEEEEecCCceEEEEeecccccceE
Q psy9770 420 GKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-V---LSGDSNGNIIVWTRGSNTISKFIRNVHEGSVF 495 (811)
Q Consensus 420 ~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-l---lsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~ 495 (811)
.|+.|++||+.+++...... .....+...|.++++.+++. + .+++.++.|++||.......... .+...+.
T Consensus 170 ~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~--~~~~~v~ 244 (318)
T 4ggc_A 170 NDNLVNVWPSAPGEGGWVPL---QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV--DAHSQVC 244 (318)
T ss_dssp TTSCEEEEESSCBTTBSCCS---EEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE--ECSSCEE
T ss_pred cCcceeEEECCCCcccccce---eeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc--cceeeee
Confidence 89999999998655332221 11245667899999999876 3 26778899999999988877665 4788899
Q ss_pred EEEEecCCcEEEEe--cCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeee
Q psy9770 496 SICVLKEGSIISAG--GKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLG 573 (811)
Q Consensus 496 ~l~~s~dg~~l~s~--s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~ 573 (811)
.++|.+++..++++ +.|+.|++||+.+++. ...+.+
T Consensus 245 ~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~------------------------------------------~~~l~g 282 (318)
T 4ggc_A 245 SILWSPHYKELISGHGFAQNQLVIWKYPTMAK------------------------------------------VAELKG 282 (318)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCCE------------------------------------------EEEECC
T ss_pred eeeecccccceEEEEEcCCCEEEEEECCCCcE------------------------------------------EEEEcC
Confidence 99999999887754 4799999999876654 223567
Q ss_pred cccceEEEEECCCCCeEEEEECCCeEEEEeCCCC
Q psy9770 574 HTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH 607 (811)
Q Consensus 574 h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~ 607 (811)
|.+.|++++|+|++++|++++.|++|+|||+.+.
T Consensus 283 H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 283 HTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999999999999999999999999999998764
No 97
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.6e-32 Score=286.29 Aligned_cols=257 Identities=14% Similarity=0.180 Sum_probs=202.3
Q ss_pred EEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcE--EEEeccCCccccEEEEEEecCCCCcEEEE
Q psy9770 293 RHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFT--VSIIGIGEFERSISCLSFSKADGGTFLCA 370 (811)
Q Consensus 293 ~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~--~~~l~~~~h~~~V~~l~fs~~~dg~~Las 370 (811)
..+.+|.+.|.+++|+|+|++||+|+.|+ +|+|||+.++.. +..+. +|...|.+++|++..+|.+|++
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~--------~v~lwd~~~~~~~~~~~l~--gH~~~V~~v~~~~~~~~~~l~s 76 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDR--------SVKIFDVRNGGQILIADLR--GHEGPVWQVAWAHPMYGNILAS 76 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTT--------EEEEEEEETTEEEEEEEEE--CCSSCEEEEEECCGGGSSCEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCC--------eEEEEEecCCCcEEEEEEc--CCCccEEEEEeCCCCCCCEEEE
Confidence 34678999999999999999999999999 999999988753 45555 9999999999986334889998
Q ss_pred EeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCC--CCCeEEEECCCcEEEEEEcCCceeeeecccccccCCC
Q psy9770 371 VDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPL--DRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDK 448 (811)
Q Consensus 371 v~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~--~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~ 448 (811)
++.|++|++||++++.. ..+..+.+|...|.+++|+|+ +..+++++.|+.|++|++..+...... ..+.+|
T Consensus 77 --~s~D~~v~iWd~~~~~~-~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~----~~~~~h 149 (316)
T 3bg1_A 77 --CSYDRKVIIWREENGTW-EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK----KINNAH 149 (316)
T ss_dssp --EETTSCEEEECCSSSCC-CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC----CBTTSS
T ss_pred --EECCCEEEEEECCCCcc-eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee----eeeccc
Confidence 78999999999987631 156778899999999999997 455666666999999999855332111 112567
Q ss_pred CceEEEEEEcCCC-----------------c-EEEEcCCCcEEEEecCCc---eEEEEeecccccceEEEEEecCC----
Q psy9770 449 PKYVTCLAFTQGG-----------------E-VLSGDSNGNIIVWTRGSN---TISKFIRNVHEGSVFSICVLKEG---- 503 (811)
Q Consensus 449 ~~~v~~l~~s~~g-----------------~-llsg~~dg~I~vwd~~~~---~~~~~~~~~h~~~V~~l~~s~dg---- 503 (811)
...+.+++|+|++ . +++|+.|+.|++||+... +....+. +|...|.+++|+|++
T Consensus 150 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~~ 228 (316)
T 3bg1_A 150 TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSDWVRDVAWAPSIGLPT 228 (316)
T ss_dssp SSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCSSCEEEEECCCCSSCSC
T ss_pred cCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCCCceEEEEecCCCCCCC
Confidence 7889999999972 3 779999999999999754 4556666 899999999999986
Q ss_pred cEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEE
Q psy9770 504 SIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAA 583 (811)
Q Consensus 504 ~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~ 583 (811)
.+|++++.||+|++|++....... . ....+..|...|++++|
T Consensus 229 ~~las~s~D~~v~iw~~~~~~~~~-~-------------------------------------~~~~~~~~~~~v~~v~~ 270 (316)
T 3bg1_A 229 STIASCSQDGRVFIWTCDDASSNT-W-------------------------------------SPKLLHKFNDVVWHVSW 270 (316)
T ss_dssp CEEEEEETTCEEEEEECSSTTCCC-C-------------------------------------BCCEEEECSSCEEEEEE
T ss_pred ceEEEEcCCCeEEEEEccCccccc-h-------------------------------------hhhhhhcCCCcEEEEEE
Confidence 889999999999999987532100 0 01123467889999999
Q ss_pred CCCCCeEEEEECCCeEEEEeCC
Q psy9770 584 HPSLSQFLTAGFDRIVQLWDSM 605 (811)
Q Consensus 584 sp~~~~l~s~s~dg~v~iwd~~ 605 (811)
+|++++|++++.|+.|++|+..
T Consensus 271 sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 271 SITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCCEEEEEcCCCeEEEEEEC
Confidence 9999999999999999999965
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1e-31 Score=299.77 Aligned_cols=303 Identities=14% Similarity=0.189 Sum_probs=224.7
Q ss_pred cCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCc-----------EEEEeccCCcc------------cc
Q psy9770 297 GHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLF-----------TVSIIGIGEFE------------RS 353 (811)
Q Consensus 297 ~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~-----------~~~~l~~~~h~------------~~ 353 (811)
.|.+.|++++|+|+|++||+|+.|| .|+|||+.+++ .+..+. +|. ..
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg--------~v~iw~~~~~~~~~~~~~~~~~~~~~~~--~h~~~~~~~~~~~~~~~ 95 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGG--------RVVIFQQEQENKIQSHSRGEYNVYSTFQ--SHEPEFDYLKSLEIEEK 95 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTS--------EEEEEEECC-----CCCCCCEEEEEEEE--CCCCEEEGGGTEEECCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCC--------eEEEEEecCCCCCCcccccceeEecccc--cccccccccccccccCc
Confidence 4678999999999999999999999 99999999877 466766 898 88
Q ss_pred EEEEEEecCCCC--cEEEEEeCCCCceEEEEEcccCCCc------------------------------------ceEEE
Q psy9770 354 ISCLSFSKADGG--TFLCAVDEGNDYNISVWDWQKSDRG------------------------------------HKITE 395 (811)
Q Consensus 354 V~~l~fs~~~dg--~~Lasv~~s~d~~i~vWd~~~~~~~------------------------------------~~~~~ 395 (811)
|.+++|+| ++ .+|++ ++.|+.|++||+.++... .+...
T Consensus 96 V~~l~~~~--~~~~~~l~s--~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
T 3dw8_B 96 INKIRWLP--QKNAAQFLL--STNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRI 171 (447)
T ss_dssp CCEEEECC--CCSSSEEEE--EECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEE
T ss_pred eEEEEEcC--CCCcceEEE--eCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEE
Confidence 99999999 55 67877 689999999999874410 00112
Q ss_pred -eeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeee-cccccccCCCCceEEEEEEcCCC-c-EEEEcCCCc
Q psy9770 396 -TKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKK-QGIFEMIRDKPKYVTCLAFTQGG-E-VLSGDSNGN 471 (811)
Q Consensus 396 -~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~-~~~~~~l~~~~~~v~~l~~s~~g-~-llsg~~dg~ 471 (811)
..+|...|.+++|+|++..++++ .|+.|++||+......... ......+.+|...|.+++|+|++ . +++|+.||.
T Consensus 172 ~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 172 FANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp ECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred eccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe
Confidence 35799999999999976666655 8999999999843332221 11111235678899999999998 5 669999999
Q ss_pred EEEEecCCceE----EEEeeccccc------------ceEEEEEecCCcEEEEecCCCcEEEEeCCC-CCccceeeeccc
Q psy9770 472 IIVWTRGSNTI----SKFIRNVHEG------------SVFSICVLKEGSIISAGGKDGRLLQFDSNL-QPTGYEAQIAEH 534 (811)
Q Consensus 472 I~vwd~~~~~~----~~~~~~~h~~------------~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~-~~~~~~~~~~~~ 534 (811)
|++||+.+++. ...+. .|.. .|.+++|+|+|++|++++. +.|++||+.. ... ...+..|
T Consensus 251 i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~--~~~~~~~ 326 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFE-EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP--VETYQVH 326 (447)
T ss_dssp EEEEETTTCSSSCTTCEEEC-CC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC--SCCEESC
T ss_pred EEEEECcCCccccceeeEec-cCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc--cceeecc
Confidence 99999998876 56666 6665 8999999999999999988 9999999975 433 1222222
Q ss_pred cCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeee-eecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe
Q psy9770 535 LGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVV-LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK 613 (811)
Q Consensus 535 ~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~-~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 613 (811)
...+..+. ... ......+..++|+|++++|++++.||.|++||+.+++.+...
T Consensus 327 ~~~~~~l~--------------------------~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 327 EYLRSKLC--------------------------SLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp GGGTTTHH--------------------------HHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEE
T ss_pred cccccccc--------------------------ccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeee
Confidence 11000000 000 000001335899999999999999999999999998876522
Q ss_pred ---------------------------------cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEec
Q psy9770 614 ---------------------------------DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDS 645 (811)
Q Consensus 614 ---------------------------------~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~ 645 (811)
.+...|..++|+|++.+||+++.++ +++|..
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 381 ASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp CCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred ecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 2345788999999999999998765 777764
No 99
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-31 Score=290.47 Aligned_cols=261 Identities=15% Similarity=0.266 Sum_probs=219.9
Q ss_pred eEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEE
Q psy9770 481 TISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILV 560 (811)
Q Consensus 481 ~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~ 560 (811)
++...+. +|.+.|.+++|+|++++|++++.||.|++||+......
T Consensus 2 ~~~~~~~-~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~---------------------------------- 46 (379)
T 3jrp_A 2 SMVVIAN-AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK---------------------------------- 46 (379)
T ss_dssp ---CCEE-ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE----------------------------------
T ss_pred CccEEec-CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcce----------------------------------
Confidence 3445566 89999999999999999999999999999998632220
Q ss_pred EEccCCceeeeeecccceEEEEECCC--CCeEEEEECCCeEEEEeCCCCc--EEEE-ecCCCCeEEEEEcCC--CCEEEE
Q psy9770 561 GSLNLGFSPVVLGHTDELWALAAHPS--LSQFLTAGFDRIVQLWDSMSHS--VVWS-KDIAEQAQSATFSPD--GSIIIV 633 (811)
Q Consensus 561 ~d~~~~~~~~~~~h~~~v~~l~~sp~--~~~l~s~s~dg~v~iwd~~~~~--~~~~-~~~~~~v~~~~~spd--g~~la~ 633 (811)
....+.+|...|.+++|+++ +.+|++++.|+.|++||+.+++ .+.. ..+...|.+++|+|+ +.+|++
T Consensus 47 ------~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 120 (379)
T 3jrp_A 47 ------LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV 120 (379)
T ss_dssp ------EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred ------eeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEE
Confidence 11234578999999999987 8999999999999999999986 4444 357789999999999 999999
Q ss_pred EEeCCeEEEEecCCcc--eeEEecCCCCCeEEEEEcc-------------CCCEEEEEecCCcEEEEEecCCCcceeEEE
Q psy9770 634 GCIAGRWLVMDSETRE--AYSIHTDGNEPIQVVKFSP-------------DGKLLALGSRDNYIYVYEVSGDSRKYSRVG 698 (811)
Q Consensus 634 g~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~i~~sp-------------dg~~lasgs~dg~I~iwd~~~~~~~~~~~~ 698 (811)
++.||.|++||+.++. ....+..|...|.+++|+| ++.+|++++.|+.|++||+..+......+.
T Consensus 121 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 200 (379)
T 3jrp_A 121 ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 200 (379)
T ss_dssp EETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEE
T ss_pred ecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEE
Confidence 9999999999998873 4456678999999999999 699999999999999999998877677778
Q ss_pred EecCCCCCeeEEEeCCC---CCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccc
Q psy9770 699 RCTGHSSFITHLDWSED---SMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVN 775 (811)
Q Consensus 699 ~~~~h~~~V~~l~~spd---g~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~ 775 (811)
.+.+|...|++++|+|+ +++|++++.||.|++||+.++...... .+.....|...|+
T Consensus 201 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------------~~~~~~~~~~~v~ 260 (379)
T 3jrp_A 201 TLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKK--------------------TLLKEEKFPDVLW 260 (379)
T ss_dssp EECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEE--------------------EESSSSCCSSCEE
T ss_pred EEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcccee--------------------eeeccccCCCcEE
Confidence 89999999999999999 899999999999999999886422110 1112234677899
Q ss_pred eEEecCCCCEEEEEcCCCcEEEEeCCC
Q psy9770 776 SCERSHDARVIATGDDFGKLKLYSYPA 802 (811)
Q Consensus 776 ~l~~s~dg~~Las~~~dg~v~vw~~~~ 802 (811)
+++|+|+|++|++++.||.|+||++..
T Consensus 261 ~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 261 RASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred EEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 999999999999999999999999874
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.9e-31 Score=291.83 Aligned_cols=279 Identities=18% Similarity=0.300 Sum_probs=240.3
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCC
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQP 524 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~ 524 (811)
.+|...|.|+.| ++. +++|+.||.|++||+.+++....+. +|.+.|.+++| ++++|++|+.||.|++||+.++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILT-GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEEC-CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEc-CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 345677999887 555 6799999999999999999999988 89999999998 78899999999999999998876
Q ss_pred ccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCce----eeeeecccceEEEEECCCCCeEEEEECCCeEE
Q psy9770 525 TGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFS----PVVLGHTDELWALAAHPSLSQFLTAGFDRIVQ 600 (811)
Q Consensus 525 ~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~----~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~ 600 (811)
. ...+..|...|.++++++ +.+++++.++.|++||+..... ..+.+|...|.++++ ++++|++++.|+.|+
T Consensus 205 ~--~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 205 M--LNTLIHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 279 (435)
T ss_dssp E--EEEECCCCSCEEEEECCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred E--EEEEcCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEE
Confidence 5 566778999999999974 5899999999999999987633 456789999999999 688999999999999
Q ss_pred EEeCCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecC
Q psy9770 601 LWDSMSHSVVWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRD 679 (811)
Q Consensus 601 iwd~~~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~d 679 (811)
+||+.+++.+..+ .+...+.+++| ++.++++|+.||.|++||+.+++.+..+.+|...|.+++| ++.+|++|+.|
T Consensus 280 vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~d 355 (435)
T 1p22_A 280 VWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD 355 (435)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred EEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCC
Confidence 9999999988775 57788999998 5789999999999999999999999999999999999999 88999999999
Q ss_pred CcEEEEEecCCCcc-----eeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccC
Q psy9770 680 NYIYVYEVSGDSRK-----YSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIP 740 (811)
Q Consensus 680 g~I~iwd~~~~~~~-----~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~ 740 (811)
|.|++||+..+... ...+..+.+|.+.|++++| ++.+|++++.||.|++||+.+.....
T Consensus 356 g~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 356 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp SCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--------
T ss_pred CcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 99999999765311 1156778899999999999 78899999999999999998766543
No 101
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.4e-31 Score=287.01 Aligned_cols=301 Identities=15% Similarity=0.195 Sum_probs=217.5
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCc----eEEEEeecccccceEEEEEec--CCcEEEEecCCCcEEEE
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSN----TISKFIRNVHEGSVFSICVLK--EGSIISAGGKDGRLLQF 518 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~----~~~~~~~~~h~~~V~~l~~s~--dg~~l~s~s~dg~I~~w 518 (811)
.+|...|.+++|+|++. +++|+.||.|++||+.++ +....+. .|...|.+++|++ ++++|++++.||.|++|
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 67889999999999998 569999999999999876 4556666 8999999999999 69999999999999999
Q ss_pred eCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCC--CCeEEEEECC
Q psy9770 519 DSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPS--LSQFLTAGFD 596 (811)
Q Consensus 519 d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~--~~~l~s~s~d 596 (811)
|+......... ... .....+.+|...|.+++|+|+ +.+|++++.|
T Consensus 87 d~~~~~~~~~~------~~~---------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 133 (351)
T 3f3f_A 87 EEDPDQEECSG------RRW---------------------------NKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND 133 (351)
T ss_dssp EECTTSCTTSS------CSE---------------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ecCCCcccccc------cCc---------------------------ceeeeecccCCceeEEEEcCCCCCcEEEEecCC
Confidence 99765431000 000 012234578899999999999 9999999999
Q ss_pred CeEEEEeCCCCcEEEEe--------------cCCCCeEEEEEcCC---CCEEEEEEeCCeEEEEecCCcce--eEEecCC
Q psy9770 597 RIVQLWDSMSHSVVWSK--------------DIAEQAQSATFSPD---GSIIIVGCIAGRWLVMDSETREA--YSIHTDG 657 (811)
Q Consensus 597 g~v~iwd~~~~~~~~~~--------------~~~~~v~~~~~spd---g~~la~g~~dg~i~i~d~~~~~~--~~~~~~~ 657 (811)
+.|++||+.+++.+..+ .+...+.+++|+|+ +.++++++.++.+.+|+...++. +..+.+|
T Consensus 134 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h 213 (351)
T 3f3f_A 134 GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGH 213 (351)
T ss_dssp CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCC
T ss_pred CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCC
Confidence 99999999887643221 35678999999997 99999999999998888887765 6778889
Q ss_pred CCCeEEEEEccCC----CEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCc----eEE
Q psy9770 658 NEPIQVVKFSPDG----KLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDY----ELL 729 (811)
Q Consensus 658 ~~~i~~i~~spdg----~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg----~i~ 729 (811)
...|++++|+|++ ++|++|+.||.|++||+..+..... ...+...+....+++....++.+..++ .+.
T Consensus 214 ~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
T 3f3f_A 214 KSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLA----SEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE 289 (351)
T ss_dssp CSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------------------
T ss_pred CcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccc----cCCcccceeccCCCcccccccccccccccceeee
Confidence 9999999999998 8999999999999999997633221 222333344444555544444443332 233
Q ss_pred EEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCCCCCcc
Q psy9770 730 YWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQPKLCL 809 (811)
Q Consensus 730 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~~~~~ 809 (811)
+|+....+.+. ....|...|++++|+|++++|++|+.||.|+||++..++...++
T Consensus 290 ~~~~~~~~~~~-------------------------~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 290 LQSNLQVELLS-------------------------EHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp -CCSEEEEEEE-------------------------EECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ecccccccEEE-------------------------EEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 33322222221 11347788999999999999999999999999999998766544
No 102
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8e-31 Score=281.29 Aligned_cols=290 Identities=13% Similarity=0.134 Sum_probs=235.0
Q ss_pred EEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc--EEEEcCCCc
Q psy9770 394 TETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE--VLSGDSNGN 471 (811)
Q Consensus 394 ~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~--llsg~~dg~ 471 (811)
....+|.+.|.+++|+|++..+++++.|+.|++|++.++........ +..|...|.+++|+|++. +++|+.||.
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ----SLRYKHPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEE----EEECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccccee----eeecCCceEEEEECCCCCcEEEEEcCCCe
Confidence 33457999999999999888888888899999999996652111111 135678899999999998 559999999
Q ss_pred EEEEec-CCceEEEEeecc--cccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCe
Q psy9770 472 IIVWTR-GSNTISKFIRNV--HEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQ 548 (811)
Q Consensus 472 I~vwd~-~~~~~~~~~~~~--h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 548 (811)
|++||+ .+++. ..+. . |...|.+++|++ +.+|++++.|+.|++||+......... ..
T Consensus 81 i~~wd~~~~~~~-~~~~-~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~---------------- 140 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALT-NNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIA-VK---------------- 140 (342)
T ss_dssp EEEECSSSSSSE-EECB-SCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEE-EE----------------
T ss_pred EEEEEeccCCce-Eecc-ccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccc-cc----------------
Confidence 999999 87765 4455 7 999999999999 999999999999999998641110000 00
Q ss_pred EEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCC-CcEE---EEecCCCCeEEEEE
Q psy9770 549 LIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMS-HSVV---WSKDIAEQAQSATF 624 (811)
Q Consensus 549 l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~-~~~~---~~~~~~~~v~~~~~ 624 (811)
......+ .|...|.+++|+|++ +++++.|+.|++||+.+ +... ....+...+.+++|
T Consensus 141 ----------------~~~~~~~-~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~ 201 (342)
T 1yfq_A 141 ----------------NLNSNNT-KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL 201 (342)
T ss_dssp ----------------ESCSSSS-SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE
T ss_pred ----------------CCeeeEE-eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEE
Confidence 0001112 277889999999887 99999999999999988 5432 33567789999999
Q ss_pred cC-CCCEEEEEEeCCeEEEEecCCc------ceeEEecCCCC---------CeEEEEEccCCCEEEEEecCCcEEEEEec
Q psy9770 625 SP-DGSIIIVGCIAGRWLVMDSETR------EAYSIHTDGNE---------PIQVVKFSPDGKLLALGSRDNYIYVYEVS 688 (811)
Q Consensus 625 sp-dg~~la~g~~dg~i~i~d~~~~------~~~~~~~~~~~---------~i~~i~~spdg~~lasgs~dg~I~iwd~~ 688 (811)
+| +++++++++.+|.|++|++... +....+..|.. .|.+++|+|++++|++++.||.|++||+.
T Consensus 202 ~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp CSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred CCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 99 9999999999999999999887 77778887755 99999999999999999999999999998
Q ss_pred CCCcceeEEEEecCC-CCCeeEEEeCCCCCeEEEecCCce-EEEEE
Q psy9770 689 GDSRKYSRVGRCTGH-SSFITHLDWSEDSMYIRSNSGDYE-LLYWN 732 (811)
Q Consensus 689 ~~~~~~~~~~~~~~h-~~~V~~l~~spdg~~L~s~s~Dg~-i~iWd 732 (811)
++ +.+..+.+| ...|++++ |++++|++++.||. .+.|.
T Consensus 282 ~~----~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 282 TR----KKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp TT----EEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred cH----hHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 86 567778888 99999999 99999999999998 44444
No 103
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.8e-31 Score=283.93 Aligned_cols=302 Identities=12% Similarity=0.144 Sum_probs=249.9
Q ss_pred EecCCceEEEEeecccccceEEEEEecC---CcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCC-eEE
Q psy9770 475 WTRGSNTISKFIRNVHEGSVFSICVLKE---GSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGS-QLI 550 (811)
Q Consensus 475 wd~~~~~~~~~~~~~h~~~V~~l~~s~d---g~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~l~ 550 (811)
|+....+.+..+. +|.+.|.+++|+|+ |++|++++.||.|++||+..........+..|...|.++++++++ .++
T Consensus 24 ~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 24 DNHNPMKDIEVTS-SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CSSCTTCCEECSS-CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCCcceeEecc-CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 3445556666666 89999999999999 699999999999999999874432446788899999999999876 577
Q ss_pred EEeCCCeEEEEEccCCceeeeeecccceEEEEE--CCCCCeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCC
Q psy9770 551 VGTTRNCILVGSLNLGFSPVVLGHTDELWALAA--HPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDG 628 (811)
Q Consensus 551 ~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~--sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg 628 (811)
+++.++.|++||+.+.....+..|...|.+++| +|++.+|++++.|+.|++||+.+++.+..+.....+.++.+.+
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-- 180 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY-- 180 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET--
T ss_pred EEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC--
Confidence 788999999999999887778899999999999 9999999999999999999999999888888777888877765
Q ss_pred CEEEEEEeCCeEEEEecCCcceeEEe--cCCCCCeEEEEEccCCCE----EEEEecCCcEEEEEecCCCcceeEEEEecC
Q psy9770 629 SIIIVGCIAGRWLVMDSETREAYSIH--TDGNEPIQVVKFSPDGKL----LALGSRDNYIYVYEVSGDSRKYSRVGRCTG 702 (811)
Q Consensus 629 ~~la~g~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~i~~spdg~~----lasgs~dg~I~iwd~~~~~~~~~~~~~~~~ 702 (811)
..+++++.++.+.+||+......... ..+...+.++++.++... +++++.||.|++|++...... ..+..+.+
T Consensus 181 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~-~~~~~~~~ 259 (368)
T 3mmy_A 181 PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA-KDNFTFKC 259 (368)
T ss_dssp TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH-HHSEEEEC
T ss_pred CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc-ccceeeee
Confidence 48889999999999999876543322 234456777777777665 999999999999999875321 23345566
Q ss_pred CCC------------CeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCC
Q psy9770 703 HSS------------FITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGAD 770 (811)
Q Consensus 703 h~~------------~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h 770 (811)
|.. .|++++|+|++++|++++.||.|++||+.+++.+..+. .|
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------------------~~ 314 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE-------------------------QL 314 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC-------------------------CC
T ss_pred eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec-------------------------CC
Confidence 665 79999999999999999999999999999887765432 35
Q ss_pred CCccceEEecCCCCEEEEEcCCCcEEEEeCCCCCC
Q psy9770 771 GTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQP 805 (811)
Q Consensus 771 ~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~ 805 (811)
...|++++|+|+|++|++|+.|+..+.|++...+.
T Consensus 315 ~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~~ 349 (368)
T 3mmy_A 315 DQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQK 349 (368)
T ss_dssp SSCEEEEEECTTSSCEEEEECCCSTTCGGGCCTTS
T ss_pred CCCceEEEECCCCCeEEEEecccccccccccCCCc
Confidence 77899999999999999999998777777655444
No 104
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8e-32 Score=286.08 Aligned_cols=247 Identities=14% Similarity=0.145 Sum_probs=205.7
Q ss_pred cccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCC---CCeEEEEeCCCeEEEEEcc
Q psy9770 488 NVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGR---GSQLIVGTTRNCILVGSLN 564 (811)
Q Consensus 488 ~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~l~~~~~~~~i~~~d~~ 564 (811)
.+|.+.|.+++|+++|++|++|+.|++|++||+..+.......+.+|...|.++++++ +..+++++.++.|++||+.
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 3899999999999999999999999999999997664324567889999999999975 5678999999999999998
Q ss_pred CC---ceeeeeecccceEEEEECCC--CCeEEEEECCCeEEEEeCCCCcEE---EE-ecCCCCeEEEEEcCC--------
Q psy9770 565 LG---FSPVVLGHTDELWALAAHPS--LSQFLTAGFDRIVQLWDSMSHSVV---WS-KDIAEQAQSATFSPD-------- 627 (811)
Q Consensus 565 ~~---~~~~~~~h~~~v~~l~~sp~--~~~l~s~s~dg~v~iwd~~~~~~~---~~-~~~~~~v~~~~~spd-------- 627 (811)
++ ....+.+|...|.+++|+|+ +.+|++++.|+.|++||+..+... .. ..+...+.+++|+|+
T Consensus 90 ~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLID 169 (316)
T ss_dssp SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-----
T ss_pred CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccc
Confidence 75 23456689999999999998 789999999999999999876322 11 246678999999997
Q ss_pred ---------CCEEEEEEeCCeEEEEecCCc---ceeEEecCCCCCeEEEEEccCC----CEEEEEecCCcEEEEEecCCC
Q psy9770 628 ---------GSIIIVGCIAGRWLVMDSETR---EAYSIHTDGNEPIQVVKFSPDG----KLLALGSRDNYIYVYEVSGDS 691 (811)
Q Consensus 628 ---------g~~la~g~~dg~i~i~d~~~~---~~~~~~~~~~~~i~~i~~spdg----~~lasgs~dg~I~iwd~~~~~ 691 (811)
+++|++|+.|+.|++||+... +.+..+.+|...|.+++|+|++ .+||+++.|++|+||++.+..
T Consensus 170 ~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~ 249 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDAS 249 (316)
T ss_dssp -CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTT
T ss_pred cccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcc
Confidence 478999999999999999754 4667788999999999999987 899999999999999998632
Q ss_pred cceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECC
Q psy9770 692 RKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAG 734 (811)
Q Consensus 692 ~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~ 734 (811)
........+.+|...|.+++|+|++++|++++.|+.|++|+..
T Consensus 250 ~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 250 SNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 1101112345688999999999999999999999999999975
No 105
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-30 Score=281.88 Aligned_cols=250 Identities=15% Similarity=0.202 Sum_probs=212.7
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecC--CceEEEEeecccccceEEEEEecC--CcEEEEecCCCcEEEEeC
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRG--SNTISKFIRNVHEGSVFSICVLKE--GSIISAGGKDGRLLQFDS 520 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~--~~~~~~~~~~~h~~~V~~l~~s~d--g~~l~s~s~dg~I~~wd~ 520 (811)
.+|...|.+++|+|++. +++|+.||.|++||+. +++....+. .|...|.+++|+++ +++|++++.||.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec-CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 56888999999999998 5689999999999998 556677777 89999999999977 999999999999999998
Q ss_pred CCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCC--CCeEEEEECCCe
Q psy9770 521 NLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPS--LSQFLTAGFDRI 598 (811)
Q Consensus 521 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~--~~~l~s~s~dg~ 598 (811)
...... ....+..|...|.+++|+|+ +.+|++++.|+.
T Consensus 87 ~~~~~~----------------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~ 126 (379)
T 3jrp_A 87 ENGRWS----------------------------------------QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK 126 (379)
T ss_dssp ETTEEE----------------------------------------EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred CCCcee----------------------------------------EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCc
Confidence 764320 01234468889999999999 999999999999
Q ss_pred EEEEeCCCCc---EEEEecCCCCeEEEEEcC-------------CCCEEEEEEeCCeEEEEecCCcc----eeEEecCCC
Q psy9770 599 VQLWDSMSHS---VVWSKDIAEQAQSATFSP-------------DGSIIIVGCIAGRWLVMDSETRE----AYSIHTDGN 658 (811)
Q Consensus 599 v~iwd~~~~~---~~~~~~~~~~v~~~~~sp-------------dg~~la~g~~dg~i~i~d~~~~~----~~~~~~~~~ 658 (811)
|++||+.+.. ......+...|.+++|+| ++.+|++++.||.|++||+.++. ....+.+|.
T Consensus 127 i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~ 206 (379)
T 3jrp_A 127 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 206 (379)
T ss_dssp EEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc
Confidence 9999998873 233356788999999999 69999999999999999998764 456778899
Q ss_pred CCeEEEEEccC---CCEEEEEecCCcEEEEEecCCCcce-eEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECC
Q psy9770 659 EPIQVVKFSPD---GKLLALGSRDNYIYVYEVSGDSRKY-SRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAG 734 (811)
Q Consensus 659 ~~i~~i~~spd---g~~lasgs~dg~I~iwd~~~~~~~~-~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~ 734 (811)
..|.+++|+|+ +++|++++.||.|++||+..+.... ..+.....|...|++++|+|++++|++++.||.|++|++.
T Consensus 207 ~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 207 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 99999999999 8999999999999999999864322 1222334588999999999999999999999999999987
Q ss_pred CC
Q psy9770 735 TC 736 (811)
Q Consensus 735 ~~ 736 (811)
.+
T Consensus 287 ~~ 288 (379)
T 3jrp_A 287 LE 288 (379)
T ss_dssp ET
T ss_pred CC
Confidence 53
No 106
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=4e-31 Score=290.97 Aligned_cols=290 Identities=16% Similarity=0.193 Sum_probs=235.0
Q ss_pred EEEEEEcCCCc-EE-EEcCCCcEEEEecCCce----EEEEeecccccceEEEEEec-CCcEEEEecCCCcEEEEeCCCCC
Q psy9770 452 VTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNT----ISKFIRNVHEGSVFSICVLK-EGSIISAGGKDGRLLQFDSNLQP 524 (811)
Q Consensus 452 v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~----~~~~~~~~h~~~V~~l~~s~-dg~~l~s~s~dg~I~~wd~~~~~ 524 (811)
...++++|+.. ++ +++.||.|+||++.... ....+. +|.+.|.+++|+| ++++|++++.||.|++||+....
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVC-GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBC-CCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEe-cCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 34678888876 33 57899999999986542 233444 8999999999999 99999999999999999998764
Q ss_pred ccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCC-CeEEEEECCCeEEEEe
Q psy9770 525 TGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSL-SQFLTAGFDRIVQLWD 603 (811)
Q Consensus 525 ~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~-~~l~s~s~dg~v~iwd 603 (811)
.... .......+.+|...|.+++|+|++ .+|++++.|+.|++||
T Consensus 116 ~~~~-----------------------------------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 116 LVLP-----------------------------------LREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp CSSC-----------------------------------BCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred Cccc-----------------------------------cCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence 4100 001234566899999999999998 6999999999999999
Q ss_pred CCCCcEEEEe---cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEe-cCCCCC-eEEEEEccCCCEEEEE--
Q psy9770 604 SMSHSVVWSK---DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIH-TDGNEP-IQVVKFSPDGKLLALG-- 676 (811)
Q Consensus 604 ~~~~~~~~~~---~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~-~~~~~~-i~~i~~spdg~~lasg-- 676 (811)
+.+++.+..+ .+...|.+++|+|++.+|++++.||.|++||+.+++.+..+ ..|... +.+++|+|++++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 240 (402)
T 2aq5_A 161 VGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS 240 (402)
T ss_dssp TTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEEC
T ss_pred CCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEecc
Confidence 9999988776 37789999999999999999999999999999999998888 677765 8999999999999999
Q ss_pred -ecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEE-EecCCceEEEEECCCCcc-cCCCCCccceeEecc
Q psy9770 677 -SRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIR-SNSGDYELLYWNAGTCRQ-IPQSSQLRDVVWESN 753 (811)
Q Consensus 677 -s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~-s~s~Dg~i~iWd~~~~~~-~~~~~~~~~~~~~~~ 753 (811)
+.|+.|++||+.+....... ....|...|.+++|+|++++|+ +++.||.|++||+.+++. +..+..
T Consensus 241 ~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~--------- 309 (402)
T 2aq5_A 241 RMSERQVALWDTKHLEEPLSL--QELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM--------- 309 (402)
T ss_dssp TTCCEEEEEEETTBCSSCSEE--EECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEE---------
T ss_pred CCCCceEEEEcCccccCCceE--EeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecc---------
Confidence 78999999999886532221 1235778899999999999986 555799999999998763 221110
Q ss_pred ceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCC
Q psy9770 754 SCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQ 804 (811)
Q Consensus 754 ~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~ 804 (811)
..|...|.+++|+|++.++++ .++.+++|++..++
T Consensus 310 --------------~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 310 --------------FSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp --------------ECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred --------------cccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 114678999999999999875 45689999998753
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=2.7e-30 Score=276.94 Aligned_cols=310 Identities=14% Similarity=0.203 Sum_probs=221.7
Q ss_pred EEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcC--CCc-EEEEcCCC
Q psy9770 394 TETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQ--GGE-VLSGDSNG 470 (811)
Q Consensus 394 ~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~--~g~-llsg~~dg 470 (811)
..+.+|.+.|.+++|+|++..+++++.|+.|++|++.++....... ..+.+|...|.+++|+| ++. +++++.||
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELS---DSWRAHDSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEE---EEEECCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceec---ceeccCCCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 3467899999999999988888888889999999998654332221 12256888999999999 466 66999999
Q ss_pred cEEEEecCCc---------eEEEEeecccccceEEEEEecC--CcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeE
Q psy9770 471 NIIVWTRGSN---------TISKFIRNVHEGSVFSICVLKE--GSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIR 539 (811)
Q Consensus 471 ~I~vwd~~~~---------~~~~~~~~~h~~~V~~l~~s~d--g~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~ 539 (811)
.|++||+.++ +....+. .|...|.+++|+|+ +.+|++++.||.|++||+.............. +.
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~---~~ 157 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE---MK 157 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE---EE
T ss_pred eEEEEecCCCcccccccCcceeeeec-ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc---cc
Confidence 9999999876 5566666 89999999999999 99999999999999999987665222211110 00
Q ss_pred EEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCC---CCeEEEEECCCeEEEEeCCCCcE--EEE-e
Q psy9770 540 TVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPS---LSQFLTAGFDRIVQLWDSMSHSV--VWS-K 613 (811)
Q Consensus 540 ~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~---~~~l~s~s~dg~v~iwd~~~~~~--~~~-~ 613 (811)
. .......|...+.+++|+|+ +.++++++.|+.+.+|+...++. +.. .
T Consensus 158 ~--------------------------~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (351)
T 3f3f_A 158 V--------------------------LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP 211 (351)
T ss_dssp S--------------------------CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC
T ss_pred c--------------------------cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC
Confidence 0 01112357788999999997 89999999999999998887765 333 3
Q ss_pred cCCCCeEEEEEcCCC----CEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCC----cEEEE
Q psy9770 614 DIAEQAQSATFSPDG----SIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDN----YIYVY 685 (811)
Q Consensus 614 ~~~~~v~~~~~spdg----~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg----~I~iw 685 (811)
.+...|.+++|+|++ ++|++++.||.|++||+..+........+...+....++++...++.+..++ .+.+|
T Consensus 212 ~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
T 3f3f_A 212 GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQ 291 (351)
T ss_dssp CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------C
T ss_pred CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeec
Confidence 577899999999998 8999999999999999998766555544444555555666665555554333 33344
Q ss_pred EecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccC
Q psy9770 686 EVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIP 740 (811)
Q Consensus 686 d~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~ 740 (811)
+. ...+.+..+.+|...|++++|+|++++|++++.||.|++|++.+++.+.
T Consensus 292 ~~----~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 292 SN----LQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp CS----EEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred cc----ccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchh
Confidence 33 3346778889999999999999999999999999999999999877554
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.98 E-value=3.3e-30 Score=286.83 Aligned_cols=293 Identities=15% Similarity=0.307 Sum_probs=235.7
Q ss_pred ccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCC
Q psy9770 296 LGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGN 375 (811)
Q Consensus 296 ~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~ 375 (811)
.+|...|.|++| |+++||+|+.|| .|+|||+.+++.+..+. +|...|.+++| ++.+|++ ++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg--------~i~iwd~~~~~~~~~~~--~h~~~v~~l~~----~~~~l~s--g~~ 191 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDN--------TIKIWDKNTLECKRILT--GHTGSVLCLQY----DERVIIT--GSS 191 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSS--------CEEEEESSSCCEEEEEC--CCSSCEEEEEC----CSSEEEE--EET
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCC--------eEEEEeCCCCeEEEEEc--CCCCcEEEEEE----CCCEEEE--EcC
Confidence 357788998887 799999999999 99999999999999987 99999999998 3578887 789
Q ss_pred CceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEE
Q psy9770 376 DYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCL 455 (811)
Q Consensus 376 d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l 455 (811)
|+.|++||+.+++ .+..+..|...|.+++|++ +.+++++.|+.|++||+.++...... ..+.+|...|.++
T Consensus 192 dg~i~vwd~~~~~---~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~----~~~~~~~~~v~~~ 262 (435)
T 1p22_A 192 DSTVRVWDVNTGE---MLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLR----RVLVGHRAAVNVV 262 (435)
T ss_dssp TSCEEEEESSSCC---EEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEE----EEECCCSSCEEEE
T ss_pred CCeEEEEECCCCc---EEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceee----eEecCCCCcEEEE
Confidence 9999999999999 8999999999999999984 56777777999999999866544211 1125677889999
Q ss_pred EEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccc
Q psy9770 456 AFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEH 534 (811)
Q Consensus 456 ~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~ 534 (811)
+| ++. +++|+.||.|++||+.+++.+..+. .|...|.++.+ ++.+|++|+.||.|++||+.++.. ...+..|
T Consensus 263 ~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~--~~~~~~h 335 (435)
T 1p22_A 263 DF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGAC--LRVLEGH 335 (435)
T ss_dssp EE--ETTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCE--EEEECCC
T ss_pred Ee--CCCEEEEEeCCCeEEEEECCcCcEEEEEc-CCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCE--EEEEeCC
Confidence 99 444 7799999999999999999999998 89999999998 467999999999999999988765 5667789
Q ss_pred cCCeEEEeeCCCCeEEEEeCCCeEEEEEccCC----------ceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeC
Q psy9770 535 LGGIRTVSEGRGSQLIVGTTRNCILVGSLNLG----------FSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDS 604 (811)
Q Consensus 535 ~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~----------~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~ 604 (811)
...|.++++ .+..+++++.+|.|++||+... ....+.+|.+.|.+++| ++.+|++++.||.|++||+
T Consensus 336 ~~~v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 336 EELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDF 412 (435)
T ss_dssp SSCEEEEEC-CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-
T ss_pred cCcEEEEEe-cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEEC
Confidence 999999999 6778999999999999998654 35567799999999999 6889999999999999999
Q ss_pred CCCcEEEEecCCCCeEEEEEc
Q psy9770 605 MSHSVVWSKDIAEQAQSATFS 625 (811)
Q Consensus 605 ~~~~~~~~~~~~~~v~~~~~s 625 (811)
.+...........+..++.|.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~ 433 (435)
T 1p22_A 413 LNDPAAQAEPPRSPSRTYTYI 433 (435)
T ss_dssp ---------------------
T ss_pred CCCCCcccCCCCCCccceeee
Confidence 887766555555555555554
No 109
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=2.7e-30 Score=279.01 Aligned_cols=314 Identities=8% Similarity=0.043 Sum_probs=216.6
Q ss_pred EEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCC--eEEE
Q psy9770 474 VWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGS--QLIV 551 (811)
Q Consensus 474 vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~l~~ 551 (811)
+|++.+.+.+.... .|...|.+++|+|||++|++|+.++ +++|+++....... .+...+..+.+.+.+ .+++
T Consensus 3 i~s~~~~~~~~~~~-~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 3 LGSMITRNPIVPEN-HVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMS----QEMRHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp -----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEE----EECSCCCEEEECTTSSEEEEE
T ss_pred cccccccCCccccc-cCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeee----eecCCeEEEEEcCCCCEEEEE
Confidence 45566666666555 8999999999999999999888765 78999876544111 122235555555443 3356
Q ss_pred EeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCC-cEEEEecCCCCeEEEEEcCCCCE
Q psy9770 552 GTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH-SVVWSKDIAEQAQSATFSPDGSI 630 (811)
Q Consensus 552 ~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~-~~~~~~~~~~~v~~~~~spdg~~ 630 (811)
++.++.|++||..++.......|...|.+++++++. ++.+ .|+.|++||+.++ +.+..+.. +...+++++ .+
T Consensus 77 ~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~ 149 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GL 149 (355)
T ss_dssp CSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TE
T ss_pred ECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEEc--cE
Confidence 777889999999887555555678899999998764 4444 4789999999987 55544333 455667777 56
Q ss_pred EEE--EEeCCeEEEEecCCcc----------------eeEEecCCCCCeEEEEEccCCCEEEEEecCCc-EEEEEecCCC
Q psy9770 631 IIV--GCIAGRWLVMDSETRE----------------AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNY-IYVYEVSGDS 691 (811)
Q Consensus 631 la~--g~~dg~i~i~d~~~~~----------------~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~-I~iwd~~~~~ 691 (811)
+++ |+.+|.|++||+.++. .+..+.+|...|++++|+|||++||+|+.|++ |+|||+.++
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~- 228 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG- 228 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC-
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC-
Confidence 666 5789999999999865 26788999999999999999999999999998 999999986
Q ss_pred cceeEEEEec-C-CCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCC
Q psy9770 692 RKYSRVGRCT-G-HSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGA 769 (811)
Q Consensus 692 ~~~~~~~~~~-~-h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 769 (811)
+.+..+. + |...|++++|+||+++|++++.|++|++||+..+....... ...+ +.+......+..........
T Consensus 229 ---~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~ 303 (355)
T 3vu4_A 229 ---VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHA-LKGW-INMKYFQSEWSLCNFKLSVD 303 (355)
T ss_dssp ---CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEE-TTTT-EECCCCCCSSCSEEEECCCC
T ss_pred ---cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCccccc-ccce-eeccccccccceeEEEeccC
Confidence 4566676 5 99999999999999999999999999999998764322110 0000 00000000000000001112
Q ss_pred CCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q psy9770 770 DGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQPK 806 (811)
Q Consensus 770 h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~~ 806 (811)
+......++|++||++|++++.||.+++|++..++..
T Consensus 304 ~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 304 KHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp TTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTT
T ss_pred CCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCC
Confidence 2334577999999999999999999999998876544
No 110
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=3.6e-30 Score=278.71 Aligned_cols=293 Identities=13% Similarity=0.131 Sum_probs=234.7
Q ss_pred EEcccCCCcceEEEeeeCCCcEEEEEecCCC---CCeEEEECCCcEEEEEEcC-CceeeeecccccccCCCCceEEEEEE
Q psy9770 382 WDWQKSDRGHKITETKCSVDTVVAAEFHPLD---RNNIVTCGKSHINFWTIDA-GGTLYKKQGIFEMIRDKPKYVTCLAF 457 (811)
Q Consensus 382 Wd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~---~~ll~~~~d~~i~iwd~~~-~~~~~~~~~~~~~l~~~~~~v~~l~~ 457 (811)
|+....+ .+..+.+|.+.|.+++|+|++ ..+++++.|+.|++|++.+ +..+... +.+|...|.+++|
T Consensus 24 ~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~------~~~h~~~v~~~~~ 94 (368)
T 3mmy_A 24 DNHNPMK---DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKA------QQMHTGPVLDVCW 94 (368)
T ss_dssp CSSCTTC---CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEE------EEECSSCEEEEEE
T ss_pred CCCCCcc---eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEE------eccccCCEEEEEE
Confidence 3344444 788889999999999999984 6667777799999999996 3333121 1457788999999
Q ss_pred cCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEE--ecCCcEEEEecCCCcEEEEeCCCCCccceeeeccc
Q psy9770 458 TQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICV--LKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEH 534 (811)
Q Consensus 458 s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~--s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~ 534 (811)
+|++. +++++.||.|++||+.+++..... .|...|.+++| ++++.+|++++.||.|++||+...... ..+
T Consensus 95 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~--- 167 (368)
T 3mmy_A 95 SDDGSKVFTASCDKTAKMWDLSSNQAIQIA--QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM--MVL--- 167 (368)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS--EEE---
T ss_pred CcCCCEEEEEcCCCcEEEEEcCCCCceeec--cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE--EEE---
Confidence 99998 669999999999999999877754 69999999999 899999999999999999999876551 111
Q ss_pred cCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe-
Q psy9770 535 LGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK- 613 (811)
Q Consensus 535 ~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~- 613 (811)
..| ..+.++.+. ...+++++.++.+++|++.........
T Consensus 168 -------------------------------------~~~-~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 207 (368)
T 3mmy_A 168 -------------------------------------QLP-ERCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRI 207 (368)
T ss_dssp -------------------------------------ECS-SCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEEC
T ss_pred -------------------------------------ecC-CCceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhc
Confidence 111 234455554 457888999999999999877654442
Q ss_pred --cCCCCeEEEEEcCCCCE----EEEEEeCCeEEEEecCCc---ceeEEecCCCC------------CeEEEEEccCCCE
Q psy9770 614 --DIAEQAQSATFSPDGSI----IIVGCIAGRWLVMDSETR---EAYSIHTDGNE------------PIQVVKFSPDGKL 672 (811)
Q Consensus 614 --~~~~~v~~~~~spdg~~----la~g~~dg~i~i~d~~~~---~~~~~~~~~~~------------~i~~i~~spdg~~ 672 (811)
.....+.++++.+++.. +++++.||.|++||+... ..+..+..|.. .|++++|+|++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 287 (368)
T 3mmy_A 208 ESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT 287 (368)
T ss_dssp CCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC
T ss_pred cccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE
Confidence 23456777777766554 999999999999999887 55667777765 7999999999999
Q ss_pred EEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECC
Q psy9770 673 LALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAG 734 (811)
Q Consensus 673 lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~ 734 (811)
|++++.||.|++||+.++ +++..+.+|...|++++|+|++++|++++.|+..+.|++-
T Consensus 288 l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 288 LATVGSDGRFSFWDKDAR----TKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EEEEETTSCEEEEETTTT----EEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred EEEEccCCeEEEEECCCC----cEEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 999999999999999986 6677889999999999999999999999998865555443
No 111
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=3.1e-30 Score=283.84 Aligned_cols=286 Identities=14% Similarity=0.175 Sum_probs=230.8
Q ss_pred EEEEEecCCCCCeEEE-ECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcC-CCc-EEEEcCCCcEEEEecCC
Q psy9770 403 VVAAEFHPLDRNNIVT-CGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQ-GGE-VLSGDSNGNIIVWTRGS 479 (811)
Q Consensus 403 V~~v~fsp~~~~ll~~-~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~-~g~-llsg~~dg~I~vwd~~~ 479 (811)
...++++|+...++++ +.+|.|++|++...+.+. .....+.+|...|.+++|+| ++. +++|+.||.|++||+.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~---~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD---KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC---TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC---CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 3457888865555554 458999999997543332 12233467889999999999 777 56999999999999998
Q ss_pred c-------eEEEEeecccccceEEEEEecCC-cEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEE
Q psy9770 480 N-------TISKFIRNVHEGSVFSICVLKEG-SIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIV 551 (811)
Q Consensus 480 ~-------~~~~~~~~~h~~~V~~l~~s~dg-~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~ 551 (811)
+ +....+. +|...|.+++|+|++ ++|++++.||.|++||+.....
T Consensus 114 ~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-------------------------- 166 (402)
T 2aq5_A 114 GGLVLPLREPVITLE-GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA-------------------------- 166 (402)
T ss_dssp TCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE--------------------------
T ss_pred CCCccccCCceEEec-CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc--------------------------
Confidence 7 5566777 899999999999998 6999999999999999986544
Q ss_pred EeCCCeEEEEEccCCceeee--eecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe--cCCCC-eEEEEEcC
Q psy9770 552 GTTRNCILVGSLNLGFSPVV--LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK--DIAEQ-AQSATFSP 626 (811)
Q Consensus 552 ~~~~~~i~~~d~~~~~~~~~--~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~--~~~~~-v~~~~~sp 626 (811)
...+ .+|...|.+++|+|++.+|++++.|+.|++||+.+++.+..+ .+... +.+++|+|
T Consensus 167 ----------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (402)
T 2aq5_A 167 ----------------VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS 230 (402)
T ss_dssp ----------------EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS
T ss_pred ----------------cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC
Confidence 1122 358889999999999999999999999999999999988775 44444 89999999
Q ss_pred CCCEEEEE---EeCCeEEEEecCCcce-eEEec-CCCCCeEEEEEccCCCEEEE-EecCCcEEEEEecCCCcceeEEEEe
Q psy9770 627 DGSIIIVG---CIAGRWLVMDSETREA-YSIHT-DGNEPIQVVKFSPDGKLLAL-GSRDNYIYVYEVSGDSRKYSRVGRC 700 (811)
Q Consensus 627 dg~~la~g---~~dg~i~i~d~~~~~~-~~~~~-~~~~~i~~i~~spdg~~las-gs~dg~I~iwd~~~~~~~~~~~~~~ 700 (811)
++.+|++| +.++.|++||+.+++. +.... .+...+.+++|+|++++|++ |+.|+.|++|++.++......+..+
T Consensus 231 ~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 231 EGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF 310 (402)
T ss_dssp TTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE
T ss_pred CCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc
Confidence 99999999 6899999999998764 33332 56778999999999999975 4579999999999875434444444
Q ss_pred cCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCc
Q psy9770 701 TGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCR 737 (811)
Q Consensus 701 ~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~ 737 (811)
. |...|.+++|+|++.++++ .++.+++|++.+++
T Consensus 311 ~-~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 311 S-SKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp C-CSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred c-cCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 4 7799999999999998865 57799999998765
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.4e-28 Score=269.25 Aligned_cols=331 Identities=13% Similarity=0.141 Sum_probs=258.3
Q ss_pred CcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCc
Q psy9770 311 KLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRG 390 (811)
Q Consensus 311 g~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~ 390 (811)
+.++++++.++ .|++||+.+++.+..+. .| ..+.+++|+| +|++|++. ++.|+.|++||+.+++
T Consensus 2 ~~l~vs~~~d~--------~v~v~d~~~~~~~~~~~--~~-~~~~~~~~s~--dg~~l~~~-~~~d~~i~v~d~~~~~-- 65 (391)
T 1l0q_A 2 TFAYIANSESD--------NISVIDVTSNKVTATIP--VG-SNPMGAVISP--DGTKVYVA-NAHSNDVSIIDTATNN-- 65 (391)
T ss_dssp EEEEEEETTTT--------EEEEEETTTTEEEEEEE--CS-SSEEEEEECT--TSSEEEEE-EGGGTEEEEEETTTTE--
T ss_pred CEEEEEcCCCC--------EEEEEECCCCeEEEEee--cC-CCcceEEECC--CCCEEEEE-CCCCCeEEEEECCCCe--
Confidence 35678888888 99999999999999886 55 4589999999 88877532 5789999999999988
Q ss_pred ceEEEeeeCCCcEEEEEecCCCCCeEEEEC-CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-E-EEEc
Q psy9770 391 HKITETKCSVDTVVAAEFHPLDRNNIVTCG-KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-V-LSGD 467 (811)
Q Consensus 391 ~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~-d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-l-lsg~ 467 (811)
.+..+..+. .+.+++|+|++..+++++. ++.|++||+.+++.+.... +...+.+++|+|+++ + ++++
T Consensus 66 -~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 66 -VIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--------TGKSPLGLALSPDGKKLYVTNN 135 (391)
T ss_dssp -EEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--------CSSSEEEEEECTTSSEEEEEET
T ss_pred -EEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe--------CCCCcceEEECCCCCEEEEEeC
Confidence 777776655 9999999999888888776 5999999999766554432 224589999999998 4 4888
Q ss_pred CCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEE-EEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCC
Q psy9770 468 SNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSII-SAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRG 546 (811)
Q Consensus 468 ~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l-~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~ 546 (811)
.++.|++||+.+++....+. . ...+.+++|+|+++.| ++++.++.|++||+......
T Consensus 136 ~~~~v~~~d~~~~~~~~~~~-~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~-------------------- 193 (391)
T 1l0q_A 136 GDKTVSVINTVTKAVINTVS-V-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI-------------------- 193 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEE-C-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE--------------------
T ss_pred CCCEEEEEECCCCcEEEEEe-c-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE--------------------
Confidence 89999999999999888876 3 4567999999999877 67788999999998765430
Q ss_pred CeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEE---CCCeEEEEeCCCCcEEEEecCCCCeEEEE
Q psy9770 547 SQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAG---FDRIVQLWDSMSHSVVWSKDIAEQAQSAT 623 (811)
Q Consensus 547 ~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s---~dg~v~iwd~~~~~~~~~~~~~~~v~~~~ 623 (811)
....+...+.+++|+|++++|++++ .++.|++||+.+++.+..+.....+.+++
T Consensus 194 -----------------------~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 250 (391)
T 1l0q_A 194 -----------------------DTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIA 250 (391)
T ss_dssp -----------------------EEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEE
T ss_pred -----------------------EEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEE
Confidence 0112445678899999999999888 68999999999999888877777899999
Q ss_pred EcCCCCEE-EEEEeCCeEEEEecCCcceeEEecCCCCCeE---EEE------------EccCC----------CEEEEEe
Q psy9770 624 FSPDGSII-IVGCIAGRWLVMDSETREAYSIHTDGNEPIQ---VVK------------FSPDG----------KLLALGS 677 (811)
Q Consensus 624 ~spdg~~l-a~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~---~i~------------~spdg----------~~lasgs 677 (811)
|+|+|++| ++++.++.|++||+.+++.+..+..+..+.. .+. |+.+. ..+...+
T Consensus 251 ~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~ 330 (391)
T 1l0q_A 251 VTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLS 330 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECC
T ss_pred EccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCC
Confidence 99999988 5557799999999999998888766544321 122 33222 2355556
Q ss_pred cCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEe
Q psy9770 678 RDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSN 722 (811)
Q Consensus 678 ~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~ 722 (811)
.|..+++|++.++.. ..+..+ ...|+++|.|.++.
T Consensus 331 ~~~~~~~W~~~~g~~--------~~~~~~--~~~~~~~g~y~~~~ 365 (391)
T 1l0q_A 331 KDATEWKWDFGDGSS--------SKKQNP--THTYSETGIYTVRL 365 (391)
T ss_dssp BSCSEEEEECSSSCE--------ECSSSC--EECCSSCEEEEEEE
T ss_pred CCceEEEEECCCCcc--------cCcCCC--eEEeCCCceEEEEE
Confidence 788899999987631 122233 36799999887754
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=2.5e-28 Score=271.31 Aligned_cols=308 Identities=12% Similarity=0.079 Sum_probs=240.4
Q ss_pred CCCCceEEEEEccc--CCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC-CCcEEEEEEcCCceeeeecccccccCCCC
Q psy9770 373 EGNDYNISVWDWQK--SDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG-KSHINFWTIDAGGTLYKKQGIFEMIRDKP 449 (811)
Q Consensus 373 ~s~d~~i~vWd~~~--~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~-d~~i~iwd~~~~~~~~~~~~~~~~l~~~~ 449 (811)
+..++.+.||.+.. +. ...+..+..+ ..+.+++|+| ++.+++++. ++.|++||+.+++...... ...+.+|.
T Consensus 95 ~~~~~~~~l~~~d~~~~~-~~~~~~~~~~-~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--~~~~~~~~ 169 (433)
T 3bws_A 95 KPEELNEKLIALDKEGIT-HRFISRFKTG-FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSP--PEKYKKKL 169 (433)
T ss_dssp SGGGGTTCEEECCBTTCS-EEEEEEEECS-SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECC--CHHHHTTC
T ss_pred ccCCCceEEEEECCCCCc-ceEEEEEcCC-CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecC--cccccccC
Confidence 34455445555543 42 1145555544 4456999999 677777766 6789999999776553221 11225677
Q ss_pred ceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEE-EecCCCcEEEEeCCCCCccc
Q psy9770 450 KYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIIS-AGGKDGRLLQFDSNLQPTGY 527 (811)
Q Consensus 450 ~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~-s~s~dg~I~~wd~~~~~~~~ 527 (811)
..+.+++|++++. +++++.|+.|++||+.+++....+. .|...+.+++|+|+++.++ +++.|+.|++||+..+..
T Consensus 170 ~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~-- 246 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE-- 246 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE--
T ss_pred CceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE--
Confidence 8899999999998 4588999999999999999888887 8899999999999998774 555899999999876543
Q ss_pred eeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEE--------CCCeE
Q psy9770 528 EAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAG--------FDRIV 599 (811)
Q Consensus 528 ~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s--------~dg~v 599 (811)
... + .+...+.+++|+|+++++++++ .|+.|
T Consensus 247 ~~~----------------------------------------~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 247 IRK----------------------------------------T-DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp EEE----------------------------------------C-CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred EEE----------------------------------------e-cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 000 0 1223478999999999999888 58899
Q ss_pred EEEeCCCCcEEEEecCCCCeEEEEEcCCCCEE-EEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEec
Q psy9770 600 QLWDSMSHSVVWSKDIAEQAQSATFSPDGSII-IVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSR 678 (811)
Q Consensus 600 ~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~l-a~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~ 678 (811)
++||+.+++.+....+...+.+++|+|+++.+ ++++.++.|++||+.+++.+..+. +...+.+++|+|+|++|++++.
T Consensus 286 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 286 GIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp EEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEEC
T ss_pred EEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEec
Confidence 99999999888887777789999999999865 555889999999999998887776 5677999999999999998876
Q ss_pred ---------------CCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecC-CceEEEEECCC
Q psy9770 679 ---------------DNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSG-DYELLYWNAGT 735 (811)
Q Consensus 679 ---------------dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~-Dg~i~iWd~~~ 735 (811)
||.|++||+.++ +.+..+.. ...+.+++|+|||++|++++. |+.|++|+++.
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~----~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTTTD----TVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETTTT----EEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCccccccccccccceEEEEEECCCC----cEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 579999999876 44455554 457899999999999988765 99999999863
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.3e-28 Score=267.57 Aligned_cols=308 Identities=14% Similarity=0.129 Sum_probs=240.4
Q ss_pred EEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEE-CCCcEEEEEEcCCceeeeeccccccc
Q psy9770 367 FLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTC-GKSHINFWTIDAGGTLYKKQGIFEMI 445 (811)
Q Consensus 367 ~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~-~d~~i~iwd~~~~~~~~~~~~~~~~l 445 (811)
++++ ++.|+.|++||+++++ .+..+..|. .+.+++|+|++..+++++ .++.|++||+.+++.+....
T Consensus 4 l~vs--~~~d~~v~v~d~~~~~---~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~------ 71 (391)
T 1l0q_A 4 AYIA--NSESDNISVIDVTSNK---VTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP------ 71 (391)
T ss_dssp EEEE--ETTTTEEEEEETTTTE---EEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE------
T ss_pred EEEE--cCCCCEEEEEECCCCe---EEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE------
Confidence 4444 7899999999999988 777777665 589999999888887766 58999999998776554432
Q ss_pred CCCCceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEE-EEecCCCcEEEEeCCC
Q psy9770 446 RDKPKYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSII-SAGGKDGRLLQFDSNL 522 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l-~s~s~dg~I~~wd~~~ 522 (811)
+...+.+++|+|+++ ++ ++..++.|++||+.+++....+. +...+.+++|+++++.| ++++.++.|++||+..
T Consensus 72 --~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 72 --AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp --CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred --CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 123699999999998 43 66678999999999999888876 45578999999999877 6888899999999876
Q ss_pred CCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeE-EEEECCCeEEE
Q psy9770 523 QPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQF-LTAGFDRIVQL 601 (811)
Q Consensus 523 ~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l-~s~s~dg~v~i 601 (811)
++.. . .+. +...+.+++|+|+++++ ++++.|+.|++
T Consensus 148 ~~~~--~----------------------------------------~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~v~~ 184 (391)
T 1l0q_A 148 KAVI--N----------------------------------------TVS-VGRSPKGIAVTPDGTKVYVANFDSMSISV 184 (391)
T ss_dssp TEEE--E----------------------------------------EEE-CCSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CcEE--E----------------------------------------EEe-cCCCcceEEECCCCCEEEEEeCCCCEEEE
Confidence 5440 0 111 12346789999999877 56778899999
Q ss_pred EeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE---eCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEE-EEEe
Q psy9770 602 WDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGC---IAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLL-ALGS 677 (811)
Q Consensus 602 wd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~---~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~l-asgs 677 (811)
||+.+++.+....+...+.+++|+|+|++|++++ .++.|++||+.+++.+..+..+. .+.+++|+|||++| ++++
T Consensus 185 ~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~ 263 (391)
T 1l0q_A 185 IDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALS 263 (391)
T ss_dssp EETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEET
T ss_pred EECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcC
Confidence 9999999888888888999999999999999988 58999999999999888887764 57899999999988 5667
Q ss_pred cCCcEEEEEecCCCcceeEEEEecCCCCCee---EEEeCCCC----------------------CeEEEecCCceEEEEE
Q psy9770 678 RDNYIYVYEVSGDSRKYSRVGRCTGHSSFIT---HLDWSEDS----------------------MYIRSNSGDYELLYWN 732 (811)
Q Consensus 678 ~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~---~l~~spdg----------------------~~L~s~s~Dg~i~iWd 732 (811)
.|+.|++||+.++ +.+..+..|..+.. .+.+.|++ ..+...+.|..+++|+
T Consensus 264 ~d~~v~v~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 339 (391)
T 1l0q_A 264 FXNTVSVIDTATN----TITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWD 339 (391)
T ss_dssp TTTEEEEEETTTT----EEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEE
T ss_pred CCCEEEEEECCCC----cEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEE
Confidence 8999999999886 44444544433221 12222211 2355556688889999
Q ss_pred CCCCcc
Q psy9770 733 AGTCRQ 738 (811)
Q Consensus 733 ~~~~~~ 738 (811)
+.+|..
T Consensus 340 ~~~g~~ 345 (391)
T 1l0q_A 340 FGDGSS 345 (391)
T ss_dssp CSSSCE
T ss_pred CCCCcc
Confidence 887753
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=2.5e-28 Score=271.28 Aligned_cols=299 Identities=12% Similarity=0.057 Sum_probs=237.9
Q ss_pred EEEEEeCCCCc--eEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEec---cCCccccEE
Q psy9770 281 VAVLYNVEEQT--QRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIG---IGEFERSIS 355 (811)
Q Consensus 281 ~i~i~d~~~~~--~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~---~~~h~~~V~ 355 (811)
.|.++|..++. ......+...+.+++|+|++.++++++.++ .|++||+.+++.+..+. +.+|...|.
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--------~i~~~d~~~g~~~~~~~~~~~~~~~~~v~ 173 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDE--------GMDVLDINSGQTVRLSPPEKYKKKLGFVE 173 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSS--------SEEEEETTTCCEEEECCCHHHHTTCCEEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCC--------eEEEEECCCCeEeeecCcccccccCCcee
Confidence 55555655442 222223345567999999888899988888 89999999999887543 237889999
Q ss_pred EEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC-CCcEEEEEEcCCce
Q psy9770 356 CLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG-KSHINFWTIDAGGT 434 (811)
Q Consensus 356 ~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~-d~~i~iwd~~~~~~ 434 (811)
+++|++ +|.++++ ++.|+.|++||+++++ .+..+..|...+.+++|+|++..+++++. ++.|++||+.++..
T Consensus 174 ~~~~~~--~~~~~~s--~~~d~~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 174 TISIPE--HNELWVS--QMQANAVHVFDLKTLA---YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp EEEEGG--GTEEEEE--EGGGTEEEEEETTTCC---EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEcC--CCEEEEE--ECCCCEEEEEECCCce---EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 999998 8899888 6889999999999988 88888899999999999998888877774 89999999986655
Q ss_pred eeeecccccccCCCCceEEEEEEcCCCc-EEEEc--------CCCcEEEEecCCceEEEEeecccccceEEEEEecCCc-
Q psy9770 435 LYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGD--------SNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGS- 504 (811)
Q Consensus 435 ~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~--------~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~- 504 (811)
+... .....+.+++|+|+|. +++++ .||.|++||+.+++....+ .|...+.+++|+|+++
T Consensus 247 ~~~~--------~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~--~~~~~~~~~~~~~~g~~ 316 (433)
T 3bws_A 247 IRKT--------DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI--GPPGNKRHIVSGNTENK 316 (433)
T ss_dssp EEEC--------CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE--EEEECEEEEEECSSTTE
T ss_pred EEEe--------cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec--cCCCCcceEEECCCCCE
Confidence 4432 1234589999999997 44555 5889999999999887776 4677899999999996
Q ss_pred EEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEEC
Q psy9770 505 IISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAH 584 (811)
Q Consensus 505 ~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~s 584 (811)
++++++.|+.|++||+...+. ...+ .+...+.+++|+
T Consensus 317 l~~~~~~~~~v~v~d~~~~~~--~~~~-----------------------------------------~~~~~~~~~~~s 353 (433)
T 3bws_A 317 IYVSDMCCSKIEVYDLKEKKV--QKSI-----------------------------------------PVFDKPNTIALS 353 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEE--EEEE-----------------------------------------ECSSSEEEEEEC
T ss_pred EEEEecCCCEEEEEECCCCcE--EEEe-----------------------------------------cCCCCCCeEEEc
Confidence 556678999999999986544 1111 133456677777
Q ss_pred CCCCeEEEEEC---------------CCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEe-CCeEEEEecCC
Q psy9770 585 PSLSQFLTAGF---------------DRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCI-AGRWLVMDSET 647 (811)
Q Consensus 585 p~~~~l~s~s~---------------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~-dg~i~i~d~~~ 647 (811)
|+++++++++. ||.|++||+.+++.+..+.....+.+++|+|+|++|++++. |+.|++|++..
T Consensus 354 ~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 354 PDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 77776666665 67999999999999888877888999999999999998875 99999999863
No 116
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.5e-30 Score=276.03 Aligned_cols=273 Identities=12% Similarity=0.049 Sum_probs=212.6
Q ss_pred EcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeecccc
Q psy9770 457 FTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHL 535 (811)
Q Consensus 457 ~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~ 535 (811)
+.+++. +++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+...
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~------------- 104 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGN------------- 104 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTT-------------
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccC-------------
Confidence 344555 6699999999999999998887765 467888888887 88899999999998763
Q ss_pred CCeEEEeeCCCCeEEEEeCCCeEEEEEccCCc-ee-eeeecccceEEEEECC--CCCeEEEEECCCeEEEEeCCCCcEEE
Q psy9770 536 GGIRTVSEGRGSQLIVGTTRNCILVGSLNLGF-SP-VVLGHTDELWALAAHP--SLSQFLTAGFDRIVQLWDSMSHSVVW 611 (811)
Q Consensus 536 ~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~-~~-~~~~h~~~v~~l~~sp--~~~~l~s~s~dg~v~iwd~~~~~~~~ 611 (811)
.+.+|++.... .. ...+|.+.|.+++|+| ++++|++++.|+.|++||+.+++...
T Consensus 105 ---------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~ 163 (343)
T 3lrv_A 105 ---------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYI 163 (343)
T ss_dssp ---------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEE
T ss_pred ---------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 34455655543 22 2236778999999999 99999999999999999999998866
Q ss_pred Ee--cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCccee-EEecC-CCCCeEEEEEccCCCEEEEEecCCcEEEEEe
Q psy9770 612 SK--DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAY-SIHTD-GNEPIQVVKFSPDGKLLALGSRDNYIYVYEV 687 (811)
Q Consensus 612 ~~--~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~-~~~~~-~~~~i~~i~~spdg~~lasgs~dg~I~iwd~ 687 (811)
.. .+...+.+++|+|+|.+|++|+.||.|++||+.+++.+ ..+.. |..+|++++|+|+|.+|++++ |+.|++||+
T Consensus 164 ~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 164 VHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDL 242 (343)
T ss_dssp EECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEET
T ss_pred EEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEc
Confidence 54 34567999999999999999999999999999999887 77887 999999999999999999999 559999999
Q ss_pred cCCCcceeEEEEecCCCCCee--EEEeCCCCCeEEEecC-CceEEEEECCCCcccCCCCCccceeEeccceeeccceeee
Q psy9770 688 SGDSRKYSRVGRCTGHSSFIT--HLDWSEDSMYIRSNSG-DYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGI 764 (811)
Q Consensus 688 ~~~~~~~~~~~~~~~h~~~V~--~l~~spdg~~L~s~s~-Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 764 (811)
....... .+..+..|...+. +++|+|+|++|++++. |+.|++|++...... |..
T Consensus 243 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~----------~~~------------ 299 (343)
T 3lrv_A 243 RKDVGTL-AYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN----------WTK------------ 299 (343)
T ss_dssp TSSTTCB-SSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCS----------EEE------------
T ss_pred CCCCcce-eecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccc----------eEe------------
Confidence 8864321 1222223444444 6999999999999988 999999999765422 110
Q ss_pred CCCCCCCCccceEEecC---CCCEEEEEcCCCcEEEEeC
Q psy9770 765 WPEGADGTDVNSCERSH---DARVIATGDDFGKLKLYSY 800 (811)
Q Consensus 765 ~~~~~h~~~I~~l~~s~---dg~~Las~~~dg~v~vw~~ 800 (811)
..+..++|++ +++.|++++.||.+.++-.
T Consensus 300 -------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 300 -------DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp -------EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred -------cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 2466777777 7788888888888887753
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=301.07 Aligned_cols=318 Identities=13% Similarity=0.151 Sum_probs=240.9
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecC--CceEEEEeecccccceEEEEEecC--CcEEEEecCCCcEEEEeC
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRG--SNTISKFIRNVHEGSVFSICVLKE--GSIISAGGKDGRLLQFDS 520 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~--~~~~~~~~~~~h~~~V~~l~~s~d--g~~l~s~s~dg~I~~wd~ 520 (811)
.+|.+.|.+++|+|++. +++|+.||.|++||+. +++....+. +|.+.|.+++|+++ +++|++|+.||.|++||+
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc-CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 67889999999999998 6799999999999997 556677777 89999999999988 999999999999999998
Q ss_pred CCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCC--CCeEEEEECCCe
Q psy9770 521 NLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPS--LSQFLTAGFDRI 598 (811)
Q Consensus 521 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~--~~~l~s~s~dg~ 598 (811)
..+... ....+.+|...|.+++|+|+ +.++++++.||.
T Consensus 85 ~~~~~~----------------------------------------~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~ 124 (753)
T 3jro_A 85 ENGRWS----------------------------------------QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK 124 (753)
T ss_dssp ETTEEE----------------------------------------EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred CCCccc----------------------------------------ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCc
Confidence 754320 01234568889999999999 999999999999
Q ss_pred EEEEeCCCCc---EEEEecCCCCeEEEEEcC-------------CCCEEEEEEeCCeEEEEecCCc----ceeEEecCCC
Q psy9770 599 VQLWDSMSHS---VVWSKDIAEQAQSATFSP-------------DGSIIIVGCIAGRWLVMDSETR----EAYSIHTDGN 658 (811)
Q Consensus 599 v~iwd~~~~~---~~~~~~~~~~v~~~~~sp-------------dg~~la~g~~dg~i~i~d~~~~----~~~~~~~~~~ 658 (811)
|++||+.++. ......+...|.+++|+| ++.+|++|+.||.|++||+.++ .....+.+|.
T Consensus 125 I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~ 204 (753)
T 3jro_A 125 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 204 (753)
T ss_dssp EEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC
Confidence 9999998873 333356788999999999 5999999999999999999876 5567788999
Q ss_pred CCeEEEEEccC---CCEEEEEecCCcEEEEEecCCCcce-eEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECC
Q psy9770 659 EPIQVVKFSPD---GKLLALGSRDNYIYVYEVSGDSRKY-SRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAG 734 (811)
Q Consensus 659 ~~i~~i~~spd---g~~lasgs~dg~I~iwd~~~~~~~~-~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~ 734 (811)
..|++++|+|+ +.+|++|+.||.|++||+..+.... ..+....+|...|++++|+|+|++|++++.||.|++|++.
T Consensus 205 ~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 205 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 99999999999 9999999999999999999864221 1222345688999999999999999999999999999998
Q ss_pred CCcccCCCCCccce---eEeccceeeccce------eeeCC--------------CCCCCCccceEEecCCCCEEEEEcC
Q psy9770 735 TCRQIPQSSQLRDV---VWESNSCTLTFTT------IGIWP--------------EGADGTDVNSCERSHDARVIATGDD 791 (811)
Q Consensus 735 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~------~~i~~--------------~~~h~~~I~~l~~s~dg~~Las~~~ 791 (811)
++............ ..........+.. ..++. .......+..+.|++||++|+.+..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~k~i~~~~rl~s~~~~~~fs~dg~lL~~~~~ 364 (753)
T 3jro_A 285 LEGKWEPAGEVHQGGGGSGGGGATSKEFDGPCQNEIDLLFSECNDEIDNAKLIMKERRFTASYTFAKFSTGSMLLTKDIV 364 (753)
T ss_dssp SSSCCBCCCCBC----------------------------------CCSHHHHHHTTTCCSCCCCCCBCTTSCBCEECSS
T ss_pred CCCCcccccccccccCCCCCCccccccccCcCCchhhhhhcccccchHHHHHHHHHhhccCCcceeEeCCCCeeeeccCC
Confidence 65433222111100 0000000000000 00000 0001335777999999999987765
Q ss_pred C-CcEEEEeCCCCC
Q psy9770 792 F-GKLKLYSYPAVQ 804 (811)
Q Consensus 792 d-g~v~vw~~~~~~ 804 (811)
. ..+++..++...
T Consensus 365 ~~~~~~~~~~ps~~ 378 (753)
T 3jro_A 365 GKSGVSIKRLPTEL 378 (753)
T ss_dssp STTSEECCCCCCCC
T ss_pred CccceEEeeccccc
Confidence 3 357777777654
No 118
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-28 Score=274.26 Aligned_cols=327 Identities=11% Similarity=0.046 Sum_probs=232.7
Q ss_pred CCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCc---EEEEeccCCccccEEEEEEec-CCCCcEEEEEeCCC
Q psy9770 300 DDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLF---TVSIIGIGEFERSISCLSFSK-ADGGTFLCAVDEGN 375 (811)
Q Consensus 300 ~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~---~~~~l~~~~h~~~V~~l~fs~-~~dg~~Lasv~~s~ 375 (811)
.+|.|++|+|||++|+++. ++ .|++||+.+|+ .+..+. .+...+....+.. ..++..+.. ...
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-~~--------~i~v~d~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~ 71 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-KN--------CILSFKYQSPNHWEFAGKWS--DDFDKIQESRNTTAKEQQGQSSE--NEN 71 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-TT--------EEEEEEEETTTEEEEEEEEE--CCC-------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-CC--------eEEEEECCCCCcceeeeecC--Cccccccccccccchhhcccccc--ccc
Confidence 4789999999999777765 55 89999999999 776665 4433222233321 012222222 111
Q ss_pred Cc-eEEEE--------EcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEE-CCCcEEEEEEc--CCceeeeeccccc
Q psy9770 376 DY-NISVW--------DWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTC-GKSHINFWTID--AGGTLYKKQGIFE 443 (811)
Q Consensus 376 d~-~i~vW--------d~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~-~d~~i~iwd~~--~~~~~~~~~~~~~ 443 (811)
+. ....- ...... .......|.+.|.+++|+|++..+++++ .|+.|++|++. ++..+.....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~--- 145 (450)
T 2vdu_B 72 ENKKLKSNKGDSIKRTAAKVPS---PGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR--- 145 (450)
T ss_dssp -------------------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE---
T ss_pred cccccccCcCccccccCccccC---CCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec---
Confidence 10 00000 000001 2233456778999999999888875555 58999999998 6665554322
Q ss_pred ccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEE----EeecccccceEEEEEecC---CcEEEEecCCCcE
Q psy9770 444 MIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISK----FIRNVHEGSVFSICVLKE---GSIISAGGKDGRL 515 (811)
Q Consensus 444 ~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~----~~~~~h~~~V~~l~~s~d---g~~l~s~s~dg~I 515 (811)
+.+...|.+++|+|++. +++|+.+|.|++|++.++.... .+. +|...|.+++|+|+ +++|++++.|+.|
T Consensus 146 --~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i 222 (450)
T 2vdu_B 146 --FCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQFIITSDRDEHI 222 (450)
T ss_dssp --EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSE-ECSSCEEEEEEEECTTSCEEEEEEETTSCE
T ss_pred --ccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeee-cccCceEEEEEcCCCCCCcEEEEEcCCCcE
Confidence 34567799999999998 5699999999999998876543 555 89999999999999 9999999999999
Q ss_pred EEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEEC
Q psy9770 516 LQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGF 595 (811)
Q Consensus 516 ~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~ 595 (811)
++||+..... + ...+.+|...|.+++|+ ++.+|++++.
T Consensus 223 ~vwd~~~~~~------------~-----------------------------~~~~~~h~~~v~~~~~s-d~~~l~s~~~ 260 (450)
T 2vdu_B 223 KISHYPQCFI------------V-----------------------------DKWLFGHKHFVSSICCG-KDYLLLSAGG 260 (450)
T ss_dssp EEEEESCTTC------------E-----------------------------EEECCCCSSCEEEEEEC-STTEEEEEES
T ss_pred EEEECCCCce------------e-----------------------------eeeecCCCCceEEEEEC-CCCEEEEEeC
Confidence 9999876544 0 01134688899999999 9999999999
Q ss_pred CCeEEEEeCCCCcEEEEec--------------------------CCCCeEEEEEcCCCCEEEEEE-eCCeEEEEec--C
Q psy9770 596 DRIVQLWDSMSHSVVWSKD--------------------------IAEQAQSATFSPDGSIIIVGC-IAGRWLVMDS--E 646 (811)
Q Consensus 596 dg~v~iwd~~~~~~~~~~~--------------------------~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~--~ 646 (811)
|+.|++||+.+++++..+. ....+.+++|+|++++|++++ .++.|++||+ .
T Consensus 261 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~ 340 (450)
T 2vdu_B 261 DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEK 340 (450)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSS
T ss_pred CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccC
Confidence 9999999999998777653 235689999999999999999 8999999999 5
Q ss_pred Cc---ceeEEecCCCCCeEEEEEccCCCEEEEEec------CCcEEEEEecCCC
Q psy9770 647 TR---EAYSIHTDGNEPIQVVKFSPDGKLLALGSR------DNYIYVYEVSGDS 691 (811)
Q Consensus 647 ~~---~~~~~~~~~~~~i~~i~~spdg~~lasgs~------dg~I~iwd~~~~~ 691 (811)
.+ +.+..+..+ ..|.+++|+|++.++++++. ++.|.+|.+....
T Consensus 341 ~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~ 393 (450)
T 2vdu_B 341 QKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNE 393 (450)
T ss_dssp STTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTT
T ss_pred CCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCC
Confidence 55 667777777 88999999996544444443 5568999887643
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=9.6e-29 Score=266.85 Aligned_cols=304 Identities=10% Similarity=0.027 Sum_probs=213.0
Q ss_pred EEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCC
Q psy9770 333 IWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLD 412 (811)
Q Consensus 333 iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~ 412 (811)
||++.+.+.+..+. .|...|.+++|+| ||++|++ ++.+ .++|||+.+.+ .+..... ..+..++|.+++
T Consensus 3 i~s~~~~~~~~~~~--~h~~~V~~v~fs~--dg~~la~--g~~~-~~~iw~~~~~~---~~~~~~~--~~~~~~~~~~~~ 70 (355)
T 3vu4_A 3 LGSMITRNPIVPEN--HVSNPVTDYEFNQ--DQSCLIL--STLK-SFEIYNVHPVA---HIMSQEM--RHLSKVRMLHRT 70 (355)
T ss_dssp ------------------CCCCCEEEECT--TSSEEEE--ECSS-EEEEEEETTEE---EEEEEEC--SCCCEEEECTTS
T ss_pred cccccccCCccccc--cCCCceEEEEECC--CCCEEEE--EcCC-EEEEEecCCcc---eeeeeec--CCeEEEEEcCCC
Confidence 67777777777665 8999999999999 8999997 5555 47899988765 4444332 247778888877
Q ss_pred CCeEEEE-CCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCc-eEEEEeeccc
Q psy9770 413 RNNIVTC-GKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSN-TISKFIRNVH 490 (811)
Q Consensus 413 ~~ll~~~-~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~-~~~~~~~~~h 490 (811)
+.+++++ +++.|++||+.+++.+.... +...|.+++|+++..+++ .++.|++||+.++ +.+..+. .
T Consensus 71 ~~~~~~~~~d~~v~iWd~~~~~~~~~~~--------~~~~v~~v~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~-~- 138 (355)
T 3vu4_A 71 NYVAFVTGVKEVVHIWDDVKKQDVSRIK--------VDAPVKDLFLSREFIVVS--YGDVISVFKFGNPWKRITDDI-R- 138 (355)
T ss_dssp SEEEEECSSTTEEEEEETTTTEEEEEEE--------CSSCEEEEEECSSEEEEE--ETTEEEEEESSTTCCBSSCCE-E-
T ss_pred CEEEEEECCccEEEEEECCCCcEEEEEE--------CCCceEEEEEcCCEEEEE--EcCEEEEEECCCCceeeEEec-c-
Confidence 7775544 47899999999777665432 345799999998754333 4789999999988 6666655 2
Q ss_pred ccceEEEEEecCCcEEEE--ecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCc-
Q psy9770 491 EGSVFSICVLKEGSIISA--GGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGF- 567 (811)
Q Consensus 491 ~~~V~~l~~s~dg~~l~s--~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~- 567 (811)
+...+++++ .+++. |+.||.|++||+............ ... .....
T Consensus 139 --~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~-----~~~----------------------~~~~p~ 187 (355)
T 3vu4_A 139 --FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQG-----VQQ----------------------KAILGK 187 (355)
T ss_dssp --EEEEEEEET--TEEEEEESSCTTCEEEEECCC---------------------------------------------C
T ss_pred --CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCcccccccc-----ccc----------------------cccCcc
Confidence 444556666 45554 689999999999865420000000 000 00001
Q ss_pred eeeeeecccceEEEEECCCCCeEEEEECCCe-EEEEeCCCCcEEEEec---CCCCeEEEEEcCCCCEEEEEEeCCeEEEE
Q psy9770 568 SPVVLGHTDELWALAAHPSLSQFLTAGFDRI-VQLWDSMSHSVVWSKD---IAEQAQSATFSPDGSIIIVGCIAGRWLVM 643 (811)
Q Consensus 568 ~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~-v~iwd~~~~~~~~~~~---~~~~v~~~~~spdg~~la~g~~dg~i~i~ 643 (811)
...+.+|.+.|.+++|+|++++|++++.|++ |++||+.+++++..+. |...|.+++|+|+|++|++++.|+.|++|
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw 267 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVF 267 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEE
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEE
Confidence 3456789999999999999999999999998 9999999999988875 88999999999999999999999999999
Q ss_pred ecCCccee--EEe---------------------cCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCC
Q psy9770 644 DSETREAY--SIH---------------------TDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDS 691 (811)
Q Consensus 644 d~~~~~~~--~~~---------------------~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~ 691 (811)
|+..+... ..+ .........++|++||++|++++.||.+++|++..++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 268 EIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp ESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred EccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 99765311 111 1112234779999999999999999999999987643
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-28 Score=273.69 Aligned_cols=283 Identities=11% Similarity=0.023 Sum_probs=230.1
Q ss_pred ceEEEEEEcCCCcEEEEcCCCcEEEEecCCce---EEEEeec--------------------------------------
Q psy9770 450 KYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNT---ISKFIRN-------------------------------------- 488 (811)
Q Consensus 450 ~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~---~~~~~~~-------------------------------------- 488 (811)
.++.+++|+++|++++++.++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 34789999999998877789999999998887 5544430
Q ss_pred ---------------ccccceEEEEEecCCcEE-EEecCCCcEEEEeCC--CCCccceeeeccccCCeEEEeeCCCC-eE
Q psy9770 489 ---------------VHEGSVFSICVLKEGSII-SAGGKDGRLLQFDSN--LQPTGYEAQIAEHLGGIRTVSEGRGS-QL 549 (811)
Q Consensus 489 ---------------~h~~~V~~l~~s~dg~~l-~s~s~dg~I~~wd~~--~~~~~~~~~~~~~~~~v~~l~~~~~~-~l 549 (811)
.|.+.|.+++|+|++++| ++++.||.|++||+. .+..........+...|.++++++++ .+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 164 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTV 164 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEE
Confidence 233479999999999996 889999999999998 65552332223567889999999876 56
Q ss_pred EEEeCCCeEEEEEccCCcee-----eeeecccceEEEEECCC---CCeEEEEECCCeEEEEeCCCCcEEEEe--cCCCCe
Q psy9770 550 IVGTTRNCILVGSLNLGFSP-----VVLGHTDELWALAAHPS---LSQFLTAGFDRIVQLWDSMSHSVVWSK--DIAEQA 619 (811)
Q Consensus 550 ~~~~~~~~i~~~d~~~~~~~-----~~~~h~~~v~~l~~sp~---~~~l~s~s~dg~v~iwd~~~~~~~~~~--~~~~~v 619 (811)
++++.++.+++|++...... .+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++.+..+ .+...|
T Consensus 165 ~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 165 IIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFV 244 (450)
T ss_dssp EEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCE
T ss_pred EEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCce
Confidence 77888899999998775332 67889999999999999 999999999999999999998877663 578899
Q ss_pred EEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecC-------------------------CCCCeEEEEEccCCCEEE
Q psy9770 620 QSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTD-------------------------GNEPIQVVKFSPDGKLLA 674 (811)
Q Consensus 620 ~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~-------------------------~~~~i~~i~~spdg~~la 674 (811)
.+++|+ ++++|++++.|+.|++||+.+++.+..+.. ....|..++|+|++++|+
T Consensus 245 ~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 323 (450)
T 2vdu_B 245 SSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVA 323 (450)
T ss_dssp EEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEE
T ss_pred EEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEE
Confidence 999999 999999999999999999999998877752 235789999999999999
Q ss_pred EEe-cCCcEEEEEe-cCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecC------CceEEEEECC
Q psy9770 675 LGS-RDNYIYVYEV-SGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSG------DYELLYWNAG 734 (811)
Q Consensus 675 sgs-~dg~I~iwd~-~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~------Dg~i~iWd~~ 734 (811)
+++ .|+.|+||++ ......+..+..+.+| ..|.+++|+|++.++++++. +..|.+|.+.
T Consensus 324 ~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 324 FFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 999 8999999999 2223345667778888 88999999996544444333 4557888764
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=4e-28 Score=250.28 Aligned_cols=300 Identities=11% Similarity=0.053 Sum_probs=209.8
Q ss_pred CCcEEEEeccC--CccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCe
Q psy9770 338 SLFTVSIIGIG--EFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNN 415 (811)
Q Consensus 338 t~~~~~~l~~~--~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~l 415 (811)
+.+.+..++-. .-.-.+.++-|-. .+.+-++.+. ..+..|++|+..++....++.+...|..+|..+.|.|+..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 101 (356)
T 2w18_A 24 NLQLVSELKNPSGSCSVDVSAMFWER-AGCKEPCIIT-ACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNL 101 (356)
T ss_dssp CEEEEEEECCCCSSCEEEEEEEEEC-----CEEEEEE-EESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSC
T ss_pred eeeeeehhcCCCCCeEEEEeeeeecc-CCCCccEEEE-eccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccce
Confidence 44555555511 1112344555544 2455555443 457899999999983333899999999999999999987777
Q ss_pred EEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCC----CcEE-EEcCCCcEEEEecCCceEEEEeeccc
Q psy9770 416 IVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQG----GEVL-SGDSNGNIIVWTRGSNTISKFIRNVH 490 (811)
Q Consensus 416 l~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~----g~ll-sg~~dg~I~vwd~~~~~~~~~~~~~h 490 (811)
++..-. .-+...|..++|+|| ++++ +++ ..+.+|++.+++.+.....+|
T Consensus 102 ~~~~~~------------------------~~~~~~v~sla~spd~~~~~~~l~s~g--~~~~v~~l~~g~lv~ss~~g~ 155 (356)
T 2w18_A 102 VCVALG------------------------NLEIREIRALFCSSDDESEKQVLLKSG--NIKAVLGLTKRRLVSSSGTLS 155 (356)
T ss_dssp EEEEEC------------------------SSSEEEEEEECC------CCEEEEEEE--EEEEEEEETTTEEEEEESSST
T ss_pred eeeeec------------------------cccccceEEEEECCCccccccEEEeCC--CeEEEEecCCCcEEEecccCC
Confidence 665421 112256999999999 7744 554 347778765555544432245
Q ss_pred ccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceee
Q psy9770 491 EGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPV 570 (811)
Q Consensus 491 ~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~ 570 (811)
++.|..++++++|+.+. .
T Consensus 156 d~~V~~~~~s~dG~~~~--------------------------------------------------------------s 173 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKE--------------------------------------------------------------N 173 (356)
T ss_dssp TCEEEEEEECTTSCEEE--------------------------------------------------------------E
T ss_pred CCcEEEEEECCCCceee--------------------------------------------------------------e
Confidence 55555555555544443 1
Q ss_pred eeecccceEEEEECC---CCCeEEEEECCCeEEEEeCCCCcEEEEec-C---CCCeEEEEEcCCCCEE------------
Q psy9770 571 VLGHTDELWALAAHP---SLSQFLTAGFDRIVQLWDSMSHSVVWSKD-I---AEQAQSATFSPDGSII------------ 631 (811)
Q Consensus 571 ~~~h~~~v~~l~~sp---~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~---~~~v~~~~~spdg~~l------------ 631 (811)
+.+|...+..++|++ ++.+|++++.|++|+|||+.+++++..+. + ...+.+++|+|+|+++
T Consensus 174 ~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~l 253 (356)
T 2w18_A 174 QFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESE 253 (356)
T ss_dssp EEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC--------
T ss_pred eccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCccee
Confidence 235777777888888 77999999999999999999999988864 2 2367888999999987
Q ss_pred EEEEeCCeEEEEecCCcceeEEe-----cCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCC
Q psy9770 632 IVGCIAGRWLVMDSETREAYSIH-----TDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSF 706 (811)
Q Consensus 632 a~g~~dg~i~i~d~~~~~~~~~~-----~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~ 706 (811)
++|+.|++|++||..+++.+..+ .+|...+.+..+ ++.++|+|+.|++|+|||+.++ +++..+.+|...
T Consensus 254 aSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tG----k~l~tL~gH~~~ 327 (356)
T 2w18_A 254 SLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLG----QCTALLPPVSDQ 327 (356)
T ss_dssp ----CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTC----SEEEEECCC--C
T ss_pred eccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCC----cEEEEecCCCCC
Confidence 55778999999999999887665 356555554444 4889999999999999999987 577788899876
Q ss_pred ee-EEEeCCCCCeEEEecCCceEEEEEC
Q psy9770 707 IT-HLDWSEDSMYIRSNSGDYELLYWNA 733 (811)
Q Consensus 707 V~-~l~~spdg~~L~s~s~Dg~i~iWd~ 733 (811)
+. .++|+|||++|++|+.|++|+|||+
T Consensus 328 vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 328 HWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 55 5899999999999999999999996
No 122
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-29 Score=298.19 Aligned_cols=259 Identities=15% Similarity=0.266 Sum_probs=218.0
Q ss_pred EeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEcc
Q psy9770 485 FIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLN 564 (811)
Q Consensus 485 ~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~ 564 (811)
.+. +|.+.|++++|+|++++|++|+.||.|++||+......
T Consensus 4 ~l~-gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~-------------------------------------- 44 (753)
T 3jro_A 4 IAN-AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK-------------------------------------- 44 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEE--------------------------------------
T ss_pred ecc-cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCc--------------------------------------
Confidence 344 89999999999999999999999999999997632210
Q ss_pred CCceeeeeecccceEEEEECCC--CCeEEEEECCCeEEEEeCCCCc--EEEE-ecCCCCeEEEEEcCC--CCEEEEEEeC
Q psy9770 565 LGFSPVVLGHTDELWALAAHPS--LSQFLTAGFDRIVQLWDSMSHS--VVWS-KDIAEQAQSATFSPD--GSIIIVGCIA 637 (811)
Q Consensus 565 ~~~~~~~~~h~~~v~~l~~sp~--~~~l~s~s~dg~v~iwd~~~~~--~~~~-~~~~~~v~~~~~spd--g~~la~g~~d 637 (811)
....+.+|.+.|.+++|+|+ +++|++++.||.|++||+.+++ .+.. ..+...|.+++|+|+ +.++++|+.|
T Consensus 45 --~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d 122 (753)
T 3jro_A 45 --LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 122 (753)
T ss_dssp --EEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred --cceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC
Confidence 11245578999999999988 8999999999999999999886 3333 457889999999999 9999999999
Q ss_pred CeEEEEecCCcc--eeEEecCCCCCeEEEEEcc-------------CCCEEEEEecCCcEEEEEecCCCcceeEEEEecC
Q psy9770 638 GRWLVMDSETRE--AYSIHTDGNEPIQVVKFSP-------------DGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTG 702 (811)
Q Consensus 638 g~i~i~d~~~~~--~~~~~~~~~~~i~~i~~sp-------------dg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~ 702 (811)
|.|++||+.++. ....+.+|...|.+++|+| ++.+|++|+.||.|++||+..+.........+.+
T Consensus 123 g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~ 202 (753)
T 3jro_A 123 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 202 (753)
T ss_dssp SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC
Confidence 999999998873 4456678999999999999 5899999999999999999988776677888899
Q ss_pred CCCCeeEEEeCCC---CCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEe
Q psy9770 703 HSSFITHLDWSED---SMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCER 779 (811)
Q Consensus 703 h~~~V~~l~~spd---g~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~ 779 (811)
|...|++++|+|+ +++|++++.||.|++||+.+++...... +.....|...|++++|
T Consensus 203 h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~--------------------~~~~~~~~~~v~~l~~ 262 (753)
T 3jro_A 203 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKT--------------------LLKEEKFPDVLWRASW 262 (753)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCC--------------------BSSSSCCSSCCCCEEE
T ss_pred CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeE--------------------EeccCCCCCceEEEEE
Confidence 9999999999999 8999999999999999998864321110 1122346788999999
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCC
Q psy9770 780 SHDARVIATGDDFGKLKLYSYPAVQ 804 (811)
Q Consensus 780 s~dg~~Las~~~dg~v~vw~~~~~~ 804 (811)
+|+|++|++|+.||.|+||++..+.
T Consensus 263 spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 263 SLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CTTTCCEEEECSSSCEECCBCCSSS
T ss_pred cCCCCEEEEEcCCCEEEEEecCCCC
Confidence 9999999999999999999998643
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.2e-29 Score=265.82 Aligned_cols=272 Identities=11% Similarity=0.053 Sum_probs=213.4
Q ss_pred CCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeeccccc
Q psy9770 364 GGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFE 443 (811)
Q Consensus 364 dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~ 443 (811)
++.+|++ |+.|++|++||+++++ .+..+. ...|.++.|+|. +++++.|+.|++|+...
T Consensus 47 d~~~l~s--g~~Dg~v~iwd~~~~~---~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~------------ 104 (343)
T 3lrv_A 47 DKWVCMC--RCEDGALHFTQLKDSK---TITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGN------------ 104 (343)
T ss_dssp EEEEEEE--EEETTEEEEEEESSSS---CEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTT------------
T ss_pred CCCEEEE--ECCCCcEEEEECCCCc---EEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccC------------
Confidence 6788887 7899999999999888 666665 456777778875 55556678888887551
Q ss_pred ccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEec--CCcEEEEecCCCcEEEEeCC
Q psy9770 444 MIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLK--EGSIISAGGKDGRLLQFDSN 521 (811)
Q Consensus 444 ~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~--dg~~l~s~s~dg~I~~wd~~ 521 (811)
.+.+|+..+++.+..+...|.+.|.+++|+| ++++|++++.||.|++||++
T Consensus 105 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~ 157 (343)
T 3lrv_A 105 ---------------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE 157 (343)
T ss_dssp ---------------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESS
T ss_pred ---------------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC
Confidence 4567787787766666657888999999999 99999999999999999998
Q ss_pred CCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEE
Q psy9770 522 LQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQL 601 (811)
Q Consensus 522 ~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~i 601 (811)
.+.. . .. ....|...|.+++|+|++.+|++|+.|+.|++
T Consensus 158 ~~~~-~-~~---------------------------------------~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 158 DDSQ-Y-IV---------------------------------------HSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp SSCE-E-EE---------------------------------------ECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred CCcE-E-EE---------------------------------------EecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 6554 0 00 01124457889999999999999999999999
Q ss_pred EeCCCCcEE-EEe-c-CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecC---CCCCeE--EEEEccCCCEE
Q psy9770 602 WDSMSHSVV-WSK-D-IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTD---GNEPIQ--VVKFSPDGKLL 673 (811)
Q Consensus 602 wd~~~~~~~-~~~-~-~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~---~~~~i~--~i~~spdg~~l 673 (811)
||+.+++.+ ..+ . |...|.+++|+|+|.+|++++ ++.|++||+++++.+..+.. |...+. +++|+|+|++|
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 275 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNM 275 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEE
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEE
Confidence 999999876 443 3 689999999999999999999 55999999999877655443 334444 69999999999
Q ss_pred EEEec-CCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCC---CCCeEEEecCCceEEEEECC
Q psy9770 674 ALGSR-DNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSE---DSMYIRSNSGDYELLYWNAG 734 (811)
Q Consensus 674 asgs~-dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp---dg~~L~s~s~Dg~i~iWd~~ 734 (811)
++++. |+.|+||++......+.. ..+..++|.+ +.+.|++++.||.+.++-..
T Consensus 276 ~~~s~~d~~i~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 276 IAYSNESNSLTIYKFDKKTKNWTK--------DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EEEETTTTEEEEEEECTTTCSEEE--------EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred EEecCCCCcEEEEEEcccccceEe--------cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 99998 999999999876555543 4577888988 88999999999999988543
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=7.6e-29 Score=271.63 Aligned_cols=245 Identities=10% Similarity=0.052 Sum_probs=172.7
Q ss_pred ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCce
Q psy9770 489 VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFS 568 (811)
Q Consensus 489 ~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~ 568 (811)
.|...+....+.+++.+|++++.|++|++||.+.+....... .
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~-------------------------------------~ 129 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHV-------------------------------------L 129 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEE-------------------------------------E
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeee-------------------------------------e
Confidence 455556666777888999999999999999987654411000 1
Q ss_pred eeeeecccceEEEEECC--------CCCeEEEEECCCeEEEEeCCCCcEEEE-ecCCCCeEEEEEcCCCC-EEEEEEeCC
Q psy9770 569 PVVLGHTDELWALAAHP--------SLSQFLTAGFDRIVQLWDSMSHSVVWS-KDIAEQAQSATFSPDGS-IIIVGCIAG 638 (811)
Q Consensus 569 ~~~~~h~~~v~~l~~sp--------~~~~l~s~s~dg~v~iwd~~~~~~~~~-~~~~~~v~~~~~spdg~-~la~g~~dg 638 (811)
..+.+|.+.|.+++|+| ++++|++++.|++|+|||+.++..+.. ..+...+.+++|+|++. +|++|+.||
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~ 209 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNG 209 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTS
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCC
Confidence 23468999999999987 788999999999999999987765544 78889999999999875 799999999
Q ss_pred eEEEEecCCcceeEEe-------------------------cCCCCCeEEEEEc-cCCCEEEEEecCCcEEEEEecCCCc
Q psy9770 639 RWLVMDSETREAYSIH-------------------------TDGNEPIQVVKFS-PDGKLLALGSRDNYIYVYEVSGDSR 692 (811)
Q Consensus 639 ~i~i~d~~~~~~~~~~-------------------------~~~~~~i~~i~~s-pdg~~lasgs~dg~I~iwd~~~~~~ 692 (811)
.|++||+.+++..... .+|...+.++.|+ +||+.|++++.|+.+++||+..+..
T Consensus 210 ~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 210 NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND 289 (393)
T ss_dssp EEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----
T ss_pred EEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC
Confidence 9999999887643221 3567788899987 7999999999999999999987532
Q ss_pred ceeEEEEecCCCCCeeEE------------------EeCC--CCCeEEEecCCceEEEEECCCCcccCCCCCccceeEec
Q psy9770 693 KYSRVGRCTGHSSFITHL------------------DWSE--DSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWES 752 (811)
Q Consensus 693 ~~~~~~~~~~h~~~V~~l------------------~~sp--dg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~ 752 (811)
...+..|...+..+ .|+| ++.++++++.||.|++||+.+++.+..+.
T Consensus 290 ----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~--------- 356 (393)
T 4gq1_A 290 ----YNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI--------- 356 (393)
T ss_dssp ------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE---------
T ss_pred ----CceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec---------
Confidence 22233333333322 2333 34467888999999999999887654321
Q ss_pred cceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeC
Q psy9770 753 NSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSY 800 (811)
Q Consensus 753 ~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~ 800 (811)
.|...|++|+|+|||++||+++++| +.+|++
T Consensus 357 ----------------~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 357 ----------------QLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp ----------------ECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred ----------------CCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 2467899999999999999999877 666654
No 125
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=2.7e-27 Score=262.75 Aligned_cols=266 Identities=18% Similarity=0.219 Sum_probs=216.7
Q ss_pred EEEEecCCceEEEEeecccccceEEEEEecC-CcEEEEecCCCcEEEEeCCCC--------CccceeeeccccCCeEEEe
Q psy9770 472 IIVWTRGSNTISKFIRNVHEGSVFSICVLKE-GSIISAGGKDGRLLQFDSNLQ--------PTGYEAQIAEHLGGIRTVS 542 (811)
Q Consensus 472 I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~d-g~~l~s~s~dg~I~~wd~~~~--------~~~~~~~~~~~~~~v~~l~ 542 (811)
+..|...+++........|.+.|++++|+|+ +.+|++++.||.|++||+... .......+..|...+.+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 188 (430)
T 2xyi_A 109 FGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLS 188 (430)
T ss_dssp ---------CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEE
T ss_pred cccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEE
Confidence 3334333444432222379999999999997 789999999999999999752 2334567788999999999
Q ss_pred eCCCC--eEEEEeCCCeEEEEEccCCc--------eeeeeecccceEEEEECC-CCCeEEEEECCCeEEEEeCCCC---c
Q psy9770 543 EGRGS--QLIVGTTRNCILVGSLNLGF--------SPVVLGHTDELWALAAHP-SLSQFLTAGFDRIVQLWDSMSH---S 608 (811)
Q Consensus 543 ~~~~~--~l~~~~~~~~i~~~d~~~~~--------~~~~~~h~~~v~~l~~sp-~~~~l~s~s~dg~v~iwd~~~~---~ 608 (811)
+++.+ .+++++.++.|++|++.... ...+.+|...|.+++|+| ++.+|++++.|+.|++||+.++ +
T Consensus 189 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 189 WNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSK 268 (430)
T ss_dssp ECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSS
T ss_pred eCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCc
Confidence 99875 58889999999999998731 345668999999999999 6789999999999999999976 3
Q ss_pred EEEE-ecCCCCeEEEEEcCCCC-EEEEEEeCCeEEEEecCC-cceeEEecCCCCCeEEEEEccCCC-EEEEEecCCcEEE
Q psy9770 609 VVWS-KDIAEQAQSATFSPDGS-IIIVGCIAGRWLVMDSET-REAYSIHTDGNEPIQVVKFSPDGK-LLALGSRDNYIYV 684 (811)
Q Consensus 609 ~~~~-~~~~~~v~~~~~spdg~-~la~g~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~i~~spdg~-~lasgs~dg~I~i 684 (811)
.+.. ..+...|.+++|+|++. +|++|+.||.|++||+.+ ...+..+..|...|.+++|+|+++ +|++++.|+.|+|
T Consensus 269 ~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~i 348 (430)
T 2xyi_A 269 PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 348 (430)
T ss_dssp CSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEE
T ss_pred ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEE
Confidence 4444 47788999999999987 688999999999999998 567888889999999999999995 6999999999999
Q ss_pred EEecCCCcc----------eeEEEEecCCCCCeeEEEeCCCCC-eEEEecCCceEEEEECCCCc
Q psy9770 685 YEVSGDSRK----------YSRVGRCTGHSSFITHLDWSEDSM-YIRSNSGDYELLYWNAGTCR 737 (811)
Q Consensus 685 wd~~~~~~~----------~~~~~~~~~h~~~V~~l~~spdg~-~L~s~s~Dg~i~iWd~~~~~ 737 (811)
||+...... ...+..+.+|...|++++|+|+++ +|++++.||.|++|++....
T Consensus 349 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 349 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp EEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred EeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 999873221 246677889999999999999999 89999999999999997643
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=6.3e-27 Score=241.37 Aligned_cols=276 Identities=9% Similarity=-0.009 Sum_probs=190.0
Q ss_pred EEEEeeccCCCCCCCCCeEEEEeCCCC---cEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCC
Q psy9770 313 LIATGQVAGHDAREGKPHIRIWNSVSL---FTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDR 389 (811)
Q Consensus 313 ~Lasg~~dg~~~~~~~~~I~iWd~~t~---~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~ 389 (811)
-+++++.. .|++|+..++ +.++++. +|+..|..+.|.|+ .-.+++.
T Consensus 56 ~~~~~~~~---------~v~lw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~~~~~------------------- 104 (356)
T 2w18_A 56 CIITACED---------VVSLWKALDAWQWEKLYTWH--FAEVPVLQIVPVPD-VYNLVCV------------------- 104 (356)
T ss_dssp EEEEEESS---------EEEEEEESSSSBEEEEEEEE--CCSSCEEEECCCTT-CCSCEEE-------------------
T ss_pred EEEEeccc---------eEEEcccCCCccceeeEEEe--ccCceeEEEEEcCc-ccceeee-------------------
Confidence 45666654 7999999999 8899987 99999999999992 3333332
Q ss_pred cceEEEeeeCCCcEEEEEecCC----CCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEE
Q psy9770 390 GHKITETKCSVDTVVAAEFHPL----DRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLS 465 (811)
Q Consensus 390 ~~~~~~~~~~~~~V~~v~fsp~----~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~lls 465 (811)
.--.-+...|.+++|+|+ +..++.++ ..+.+|++. +++++.
T Consensus 105 ----~~~~~~~~~v~sla~spd~~~~~~~l~s~g--~~~~v~~l~-----------------------------~g~lv~ 149 (356)
T 2w18_A 105 ----ALGNLEIREIRALFCSSDDESEKQVLLKSG--NIKAVLGLT-----------------------------KRRLVS 149 (356)
T ss_dssp ----EECSSSEEEEEEECC------CCEEEEEEE--EEEEEEEET-----------------------------TTEEEE
T ss_pred ----eeccccccceEEEEECCCccccccEEEeCC--CeEEEEecC-----------------------------CCcEEE
Confidence 111113456889999997 44444433 235556543 455553
Q ss_pred Ec---CCCcEEEEec-CCceEEEEeecccccceEEEEEec---CCcEEEEecCCCcEEEEeCCCCCccceeeeccc---c
Q psy9770 466 GD---SNGNIIVWTR-GSNTISKFIRNVHEGSVFSICVLK---EGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEH---L 535 (811)
Q Consensus 466 g~---~dg~I~vwd~-~~~~~~~~~~~~h~~~V~~l~~s~---dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~---~ 535 (811)
.+ .|+.|++|++ .+++.+..+. .|...+..++|++ ++.+|++++.|++|++||+.+++. ...+.++ .
T Consensus 150 ss~~g~d~~V~~~~~s~dG~~~~s~~-~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~--l~tL~g~~~~v 226 (356)
T 2w18_A 150 SSGTLSDQQVEVMTFAEDGGGKENQF-LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL--LKKMHIDDSYQ 226 (356)
T ss_dssp EESSSTTCEEEEEEECTTSCEEEEEE-ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCE--EEEEECCC---
T ss_pred ecccCCCCcEEEEEECCCCceeeeec-cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcE--EEEEcCCCcce
Confidence 32 4888888888 4477777777 8999999999999 789999999999999999998876 2333322 2
Q ss_pred CCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe--
Q psy9770 536 GGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK-- 613 (811)
Q Consensus 536 ~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~-- 613 (811)
..+.+++|+|++.+++..... . ....+++|+.|++|++||..+++.+..+
T Consensus 227 ~~v~~vafSpdG~~lvs~s~~-------------------~---------~~w~laSGs~D~tIklWd~~tgk~l~v~~~ 278 (356)
T 2w18_A 227 ASVCHKAYSEMGLLFIVLSHP-------------------C---------AKESESLRSPVFQLIVINPKTTLSVGVMLY 278 (356)
T ss_dssp CCCEEEEEEETTEEEEEEC----------------------------------------CCEEEEEEETTTTEEEEEEEE
T ss_pred eeeEEEEECCCCCEEEEeccC-------------------C---------CcceeeccCCCcEEEEEECCCCEEEEEEEe
Confidence 234444555554443321100 0 0113578999999999999999887653
Q ss_pred ----cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeE-EEEEccCCCEEEEEecCCcEEEEEe
Q psy9770 614 ----DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQ-VVKFSPDGKLLALGSRDNYIYVYEV 687 (811)
Q Consensus 614 ----~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~-~i~~spdg~~lasgs~dg~I~iwd~ 687 (811)
.+...+.+..+ ++.++|+|+.||+|+|||+.+++++.++.+|...+. .++|+|||++|++|+.|++|+|||+
T Consensus 279 ~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 279 CLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred eccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 22233443333 478899999999999999999999999998877655 6899999999999999999999996
No 127
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=7.9e-28 Score=263.56 Aligned_cols=236 Identities=14% Similarity=0.103 Sum_probs=167.1
Q ss_pred eEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEE-----eecccccceEEEEEec--------CCcEEEEecCCCcEE
Q psy9770 451 YVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKF-----IRNVHEGSVFSICVLK--------EGSIISAGGKDGRLL 516 (811)
Q Consensus 451 ~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~-----~~~~h~~~V~~l~~s~--------dg~~l~s~s~dg~I~ 516 (811)
......+.+++. +++++.|++|++||..+++.... +. +|.+.|.+++|+| |+++|++++.|++|+
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~-gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~ 169 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKS-GHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLI 169 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTT-SCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEE
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccC-CCCCceEEEEEccccccccCCCCCEEEEEECCCeEE
Confidence 344455566666 55999999999999988765432 33 8999999999998 889999999999999
Q ss_pred EEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCC-eEEEEEC
Q psy9770 517 QFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLS-QFLTAGF 595 (811)
Q Consensus 517 ~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~ 595 (811)
+||+..... ...+.+|...+.+++|+|++. +|++++.
T Consensus 170 ~Wd~~~~~~------------------------------------------~~~~~~~~~~v~~v~~~p~~~~~l~~~~~ 207 (393)
T 4gq1_A 170 IWRLTDEGP------------------------------------------ILAGYPLSSPGISVQFRPSNPNQLIVGER 207 (393)
T ss_dssp EEEEETTEE------------------------------------------EEEEEECSSCEEEEEEETTEEEEEEEEET
T ss_pred EEECCCCce------------------------------------------eeeecCCCCCcEEEEECCCCCceEEecCC
Confidence 999865433 123446888899999999875 7999999
Q ss_pred CCeEEEEeCCCCcEEEEe--------------------------cCCCCeEEEEEc-CCCCEEEEEEeCCeEEEEecCCc
Q psy9770 596 DRIVQLWDSMSHSVVWSK--------------------------DIAEQAQSATFS-PDGSIIIVGCIAGRWLVMDSETR 648 (811)
Q Consensus 596 dg~v~iwd~~~~~~~~~~--------------------------~~~~~v~~~~~s-pdg~~la~g~~dg~i~i~d~~~~ 648 (811)
|++|++||+.+++..... .+...+.++.|+ |||+.|++++.|+.+++||+..+
T Consensus 208 d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 208 NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp TSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 999999999877543321 244567888886 89999999999999999999988
Q ss_pred ceeEEecCCCCCeEEEEE------------------cc--CCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCee
Q psy9770 649 EAYSIHTDGNEPIQVVKF------------------SP--DGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFIT 708 (811)
Q Consensus 649 ~~~~~~~~~~~~i~~i~~------------------sp--dg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~ 708 (811)
+....+..|...+..+.+ +| ++.++++|+.||.|+|||+.++.. +..+.+|...|.
T Consensus 288 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~----~~~~~~~~~~V~ 363 (393)
T 4gq1_A 288 NDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS----NSIPIQLGMPIV 363 (393)
T ss_dssp ----------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC----CEEEEECSSCEE
T ss_pred CCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE----EEEecCCCCcEE
Confidence 776666555444443333 33 344677888999999999998743 334567889999
Q ss_pred EEEeCCCCCeEEEecCCceEEEEECC
Q psy9770 709 HLDWSEDSMYIRSNSGDYELLYWNAG 734 (811)
Q Consensus 709 ~l~~spdg~~L~s~s~Dg~i~iWd~~ 734 (811)
+++|+|||++||+++.|| +.+|.+.
T Consensus 364 svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 364 DFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 999999999999998776 6666543
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=2.3e-26 Score=261.49 Aligned_cols=327 Identities=11% Similarity=0.080 Sum_probs=253.3
Q ss_pred EecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEE--cCCceee
Q psy9770 359 FSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTI--DAGGTLY 436 (811)
Q Consensus 359 fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~--~~~~~~~ 436 (811)
|+| ++.++++ ++.+++|.+||..+++ ++..+..+.. +..++|+|+++.+++++.++.|.+||+ .++..+.
T Consensus 145 ~~p--~~~~~vs--~~~d~~V~v~D~~t~~---~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 145 LDL--PNLFSVT--LRDAGQIALVDGDSKK---IVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCG--GGEEEEE--EGGGTEEEEEETTTCC---EEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred cCC--CCEEEEE--EcCCCeEEEEECCCce---EEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEE
Confidence 788 7777776 7889999999999998 8888885444 889999999999999999999999999 6555444
Q ss_pred eecccccccCCCCceEEEEEEcC----CCcE-EEEc-CCCcEEEEecCCceEEEEeecc---------cc-cceEEEEEe
Q psy9770 437 KKQGIFEMIRDKPKYVTCLAFTQ----GGEV-LSGD-SNGNIIVWTRGSNTISKFIRNV---------HE-GSVFSICVL 500 (811)
Q Consensus 437 ~~~~~~~~l~~~~~~v~~l~~s~----~g~l-lsg~-~dg~I~vwd~~~~~~~~~~~~~---------h~-~~V~~l~~s 500 (811)
... +...+..++|+| +|++ ++++ .++.|.+||..+++++..+... |. ..+.++.++
T Consensus 217 ~i~--------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s 288 (543)
T 1nir_A 217 EIK--------IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS 288 (543)
T ss_dssp EEE--------CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred EEe--------cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEEC
Confidence 332 234579999999 9984 4555 5899999999999998887621 22 378899999
Q ss_pred cCC-cEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceE
Q psy9770 501 KEG-SIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELW 579 (811)
Q Consensus 501 ~dg-~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~ 579 (811)
+++ .++++...++.|.+||.......... ...+...+.
T Consensus 289 ~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~-----------------------------------------~i~~~~~~~ 327 (543)
T 1nir_A 289 HEHPEFIVNVKETGKVLLVNYKDIDNLTVT-----------------------------------------SIGAAPFLH 327 (543)
T ss_dssp SSSSEEEEEETTTTEEEEEECTTSSSCEEE-----------------------------------------EEECCSSCC
T ss_pred CCCCEEEEEECCCCeEEEEEecCCCcceeE-----------------------------------------EeccCcCcc
Confidence 965 45667778899999998765431100 112334566
Q ss_pred EEEECCCCCeEEEEE-CCCeEEEEeCCCCcEEEEec-----CCCCeEEEEEcCC-CCEEEEEE-eCCeEEEEecCC----
Q psy9770 580 ALAAHPSLSQFLTAG-FDRIVQLWDSMSHSVVWSKD-----IAEQAQSATFSPD-GSIIIVGC-IAGRWLVMDSET---- 647 (811)
Q Consensus 580 ~l~~sp~~~~l~s~s-~dg~v~iwd~~~~~~~~~~~-----~~~~v~~~~~spd-g~~la~g~-~dg~i~i~d~~~---- 647 (811)
+++|+|++++|++++ .+++|.+||+.+++++..+. |.+....+ ++|+ |..++++. .++.|.+||+.+
T Consensus 328 ~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~ 406 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP 406 (543)
T ss_dssp CEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred CceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc
Confidence 889999999877665 58899999999999887754 33333333 5787 55555554 579999999998
Q ss_pred ---cceeEEecCCCCCeEEEEEccCCCEEEEEe-------cCCcEEEEEecCCCcceeEEEE-----ecCCCCCeeEEEe
Q psy9770 648 ---REAYSIHTDGNEPIQVVKFSPDGKLLALGS-------RDNYIYVYEVSGDSRKYSRVGR-----CTGHSSFITHLDW 712 (811)
Q Consensus 648 ---~~~~~~~~~~~~~i~~i~~spdg~~lasgs-------~dg~I~iwd~~~~~~~~~~~~~-----~~~h~~~V~~l~~ 712 (811)
.+++..+..|...+..++|+|||++|++++ .++.|.|||+.+.+..++.+.. +..+...+.++.|
T Consensus 407 ~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 486 (543)
T 1nir_A 407 QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEY 486 (543)
T ss_dssp TTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEE
T ss_pred hhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccC
Confidence 889999999988889999999999999987 2679999999988655443211 2456788999999
Q ss_pred CCCCCeEEEe-----cCCceEEEEECCCCcccCCCC
Q psy9770 713 SEDSMYIRSN-----SGDYELLYWNAGTCRQIPQSS 743 (811)
Q Consensus 713 spdg~~L~s~-----s~Dg~i~iWd~~~~~~~~~~~ 743 (811)
+|||++|+++ +.|+.|.|||.++++++..+.
T Consensus 487 ~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 487 NKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp CSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred CCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 9999998865 247999999999999877654
No 129
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=7.6e-27 Score=259.11 Aligned_cols=251 Identities=14% Similarity=0.184 Sum_probs=205.9
Q ss_pred CccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEccc----------CCCcceEEEeeeCCCcEEEEEecCCCCCeEE-
Q psy9770 349 EFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQK----------SDRGHKITETKCSVDTVVAAEFHPLDRNNIV- 417 (811)
Q Consensus 349 ~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~----------~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~- 417 (811)
.|.+.|.+++|+| +++.+|++ ++.+|.|+|||+.+ .. .+..+.+|...|.+++|+|++..+++
T Consensus 126 ~h~~~v~~l~~~p-~~~~~lat--~~~dg~V~vwd~~~~~~~~~~~~~~~---~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 126 NHEGEVNRARYMP-QNACVIAT--KTPSSDVLVFDYTKHPSKPEPSGECQ---PDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EESSCCSEEEEET-TEEEEEEE--ECSSSCEEEEEGGGSCSSCCTTCCCC---CSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred cCCCcEEEEEECC-CCCcEEEE--ECCCCcEEEEECCCcccccCccccCC---CcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 7999999999999 23678887 78899999999987 34 78888999999999999998884544
Q ss_pred EECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCC-Cc-EEEEcCCCcEEEEecCCc---eEEEEeeccccc
Q psy9770 418 TCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQG-GE-VLSGDSNGNIIVWTRGSN---TISKFIRNVHEG 492 (811)
Q Consensus 418 ~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~-g~-llsg~~dg~I~vwd~~~~---~~~~~~~~~h~~ 492 (811)
++.||.|++|++..+............+..|...|.+++|+|+ +. +++++.||.|++||+.++ .....+. .|..
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~ 278 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTA 278 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSS
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCCC
Confidence 5558999999998643221111112223568889999999994 44 559999999999999876 4666666 8999
Q ss_pred ceEEEEEecCCc-EEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCC--eEEEEeCCCeEEEEEccC----
Q psy9770 493 SVFSICVLKEGS-IISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGS--QLIVGTTRNCILVGSLNL---- 565 (811)
Q Consensus 493 ~V~~l~~s~dg~-~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~l~~~~~~~~i~~~d~~~---- 565 (811)
.|.+++|+|++. +|++|+.||.|++||++.... ....+..|...|.+++++|++ .+++++.++.|.+||+..
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-CeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 999999999887 788999999999999987443 456777899999999999976 477888999999999987
Q ss_pred -----------CceeeeeecccceEEEEECCCCC-eEEEEECCCeEEEEeCCCC
Q psy9770 566 -----------GFSPVVLGHTDELWALAAHPSLS-QFLTAGFDRIVQLWDSMSH 607 (811)
Q Consensus 566 -----------~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s~dg~v~iwd~~~~ 607 (811)
.......+|...|.+++|+|+++ +|++++.||.|++|++...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 33445568899999999999999 9999999999999998654
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=2.3e-25 Score=253.26 Aligned_cols=333 Identities=13% Similarity=0.093 Sum_probs=256.5
Q ss_pred EEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEc-
Q psy9770 306 SIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDW- 384 (811)
Q Consensus 306 a~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~- 384 (811)
+|+|++.++++++.++ .|.+||..+++++.++.. ++ . +.+++|+| ||++|++ ++.|+.|.+||+
T Consensus 144 ~~~p~~~~~vs~~~d~--------~V~v~D~~t~~~~~~i~~-g~-~-~~~v~~sp--dg~~l~v--~~~d~~V~v~D~~ 208 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAG--------QIALVDGDSKKIVKVIDT-GY-A-VHISRMSA--SGRYLLV--IGRDARIDMIDLW 208 (543)
T ss_dssp CCCGGGEEEEEEGGGT--------EEEEEETTTCCEEEEEEC-ST-T-EEEEEECT--TSCEEEE--EETTSEEEEEETT
T ss_pred ccCCCCEEEEEEcCCC--------eEEEEECCCceEEEEEec-Cc-c-cceEEECC--CCCEEEE--ECCCCeEEEEECc
Confidence 4899999999999998 999999999999999862 23 2 89999999 8999998 567799999999
Q ss_pred -ccCCCcceEEEeeeCCCcEEEEEecC----CCCCeEEEEC-CCcEEEEEEcCCceeeeecccccccC---CCC-ceEEE
Q psy9770 385 -QKSDRGHKITETKCSVDTVVAAEFHP----LDRNNIVTCG-KSHINFWTIDAGGTLYKKQGIFEMIR---DKP-KYVTC 454 (811)
Q Consensus 385 -~~~~~~~~~~~~~~~~~~V~~v~fsp----~~~~ll~~~~-d~~i~iwd~~~~~~~~~~~~~~~~l~---~~~-~~v~~ 454 (811)
.+++ .+..+.. ...+..++|+| +++.+++++. ++.|.+||..+++.+......-.... .|+ ..+.+
T Consensus 209 ~~t~~---~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~ 284 (543)
T 1nir_A 209 AKEPT---KVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAA 284 (543)
T ss_dssp SSSCE---EEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEE
T ss_pred CCCCc---EEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEE
Confidence 7777 7777774 55679999999 9999888885 79999999987776655432110000 022 36889
Q ss_pred EEEcCCCc--EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEE-ecCCCcEEEEeCCCCCccceeee
Q psy9770 455 LAFTQGGE--VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISA-GGKDGRLLQFDSNLQPTGYEAQI 531 (811)
Q Consensus 455 l~~s~~g~--llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s-~s~dg~I~~wd~~~~~~~~~~~~ 531 (811)
+.++|++. +++...+|.|.+||..+.+.+......+...+..+.|+|+|++|++ +..+++|.+||..++++......
T Consensus 285 i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~ 364 (543)
T 1nir_A 285 IIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV 364 (543)
T ss_dssp EEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc
Confidence 99999877 4578889999999998765444212146677889999999997664 45689999999998876333322
Q ss_pred c--cccCCeEEEeeCCCCeEEEEe--CCCeEEEEEccC--------CceeeeeecccceEEEEECCCCCeEEEEE-----
Q psy9770 532 A--EHLGGIRTVSEGRGSQLIVGT--TRNCILVGSLNL--------GFSPVVLGHTDELWALAAHPSLSQFLTAG----- 594 (811)
Q Consensus 532 ~--~~~~~v~~l~~~~~~~l~~~~--~~~~i~~~d~~~--------~~~~~~~~h~~~v~~l~~sp~~~~l~s~s----- 594 (811)
. .|.+....+...+++.+++.. .++.|.+|+... .....+.+|.+.+..++++|++++|++++
T Consensus 365 g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~ 444 (543)
T 1nir_A 365 GKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPD 444 (543)
T ss_dssp SSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSS
T ss_pred CCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCC
Confidence 1 143333334333346666654 468999999986 24567778888889999999999999987
Q ss_pred --CCCeEEEEeCCCCcEE-EEe---------cCCCCeEEEEEcCCCCEEEEEEe-----CCeEEEEecCCcceeEEecCC
Q psy9770 595 --FDRIVQLWDSMSHSVV-WSK---------DIAEQAQSATFSPDGSIIIVGCI-----AGRWLVMDSETREAYSIHTDG 657 (811)
Q Consensus 595 --~dg~v~iwd~~~~~~~-~~~---------~~~~~v~~~~~spdg~~la~g~~-----dg~i~i~d~~~~~~~~~~~~~ 657 (811)
.+++|.+||+.+++.. ..+ .....+..+.|+|+|+.|+++.. ++.|.|||..+++++..++..
T Consensus 445 ~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~ 524 (543)
T 1nir_A 445 ARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP 524 (543)
T ss_dssp HHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred cccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCC
Confidence 2679999999998876 333 33568999999999999998743 799999999999999998864
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=1.3e-25 Score=247.53 Aligned_cols=302 Identities=12% Similarity=0.074 Sum_probs=230.1
Q ss_pred cccEEEEEEecCCCC-cEEEEEe--CCCCc----eEEEEEc--ccCCCcceE--EEeeeCCCcEEEEEecCC--------
Q psy9770 351 ERSISCLSFSKADGG-TFLCAVD--EGNDY----NISVWDW--QKSDRGHKI--TETKCSVDTVVAAEFHPL-------- 411 (811)
Q Consensus 351 ~~~V~~l~fs~~~dg-~~Lasv~--~s~d~----~i~vWd~--~~~~~~~~~--~~~~~~~~~V~~v~fsp~-------- 411 (811)
...+...+|++ .| +++++-+ ...+| .|+|||+ .+++ ++ ..+.+|...+..+++++.
T Consensus 62 ~~~~~~~~w~~--~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 136 (415)
T 2hqs_A 62 AQEVQPAAWSA--LGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGT---VLAQNSYKVNKQWLRYAGHTASDEVFEKLT 136 (415)
T ss_dssp GGGCCHHHHHT--TTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTC---EEEEEEEEECGGGHHHHHHHHHHHHHHHHH
T ss_pred ccCcCHHHHHh--cCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCC---EEeeeEEEcChhHHHHHHHHHHHHHHHHHc
Confidence 34677788887 44 4554411 13566 8999999 8888 66 458888888887777651
Q ss_pred ------CCCeEEEECC------CcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCC---cEEEE
Q psy9770 412 ------DRNNIVTCGK------SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNG---NIIVW 475 (811)
Q Consensus 412 ------~~~ll~~~~d------~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg---~I~vw 475 (811)
+..+++++.+ +.|++||++ +...... .+|...+.+++|+|+|+ +++++.++ .|++|
T Consensus 137 g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l-------~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~ 208 (415)
T 2hqs_A 137 GIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVV-------HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQ 208 (415)
T ss_dssp SSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEE-------EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEE-------eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEE
Confidence 5556666553 689999997 4444333 33556799999999998 55676664 99999
Q ss_pred ecCCceEEEEeecccccceEEEEEecCCcEEE-EecCCCc--EEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEE
Q psy9770 476 TRGSNTISKFIRNVHEGSVFSICVLKEGSIIS-AGGKDGR--LLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVG 552 (811)
Q Consensus 476 d~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~-s~s~dg~--I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~ 552 (811)
|+.+++... +. .|.+.+.+++|+|||+.|+ +++.++. |++||+.++..
T Consensus 209 d~~tg~~~~-l~-~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~--------------------------- 259 (415)
T 2hqs_A 209 TLANGAVRQ-VA-SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI--------------------------- 259 (415)
T ss_dssp ETTTCCEEE-EE-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---------------------------
T ss_pred ECCCCcEEE-ee-cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE---------------------------
Confidence 999988764 44 5888999999999999777 6666654 77788765443
Q ss_pred eCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEEC-CC--eEEEEeCCCCcEEEEecCCCCeEEEEEcCCCC
Q psy9770 553 TTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGF-DR--IVQLWDSMSHSVVWSKDIAEQAQSATFSPDGS 629 (811)
Q Consensus 553 ~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~-dg--~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~ 629 (811)
..+..|...+.+++|+|++++|++++. ++ .|.+||+.+++......+...+.+++|+|||+
T Consensus 260 ----------------~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 260 ----------------RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGK 323 (415)
T ss_dssp ----------------EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSS
T ss_pred ----------------EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCC
Confidence 223456677889999999999998886 44 68888998887655455567889999999999
Q ss_pred EEEEEEeC---CeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCC---cEEEEEecCCCcceeEEEEecCC
Q psy9770 630 IIIVGCIA---GRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDN---YIYVYEVSGDSRKYSRVGRCTGH 703 (811)
Q Consensus 630 ~la~g~~d---g~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg---~I~iwd~~~~~~~~~~~~~~~~h 703 (811)
+|++++.+ +.|.+||+.+++.. .+..+. .+.+++|+|||++|++++.++ .|++||+..+ ....+.+|
T Consensus 324 ~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~-----~~~~l~~~ 396 (415)
T 2hqs_A 324 FMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR-----FKARLPAT 396 (415)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC-----CEEECCCS
T ss_pred EEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC-----cEEEeeCC
Confidence 99998875 58999999988774 455454 899999999999999988877 7999998753 44567889
Q ss_pred CCCeeEEEeCCCCC
Q psy9770 704 SSFITHLDWSEDSM 717 (811)
Q Consensus 704 ~~~V~~l~~spdg~ 717 (811)
.+.|.+++|+|.-.
T Consensus 397 ~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 397 DGQVKFPAWSPYLH 410 (415)
T ss_dssp SSEEEEEEECCCCC
T ss_pred CCCCcCCccccccc
Confidence 99999999999654
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=8.7e-25 Score=240.84 Aligned_cols=279 Identities=18% Similarity=0.124 Sum_probs=219.7
Q ss_pred cceEEEEEecCCc-EEEEec----CCC----cEEEEeC--CCCCccceeeeccccCCeEEEeeCC---------------
Q psy9770 492 GSVFSICVLKEGS-IISAGG----KDG----RLLQFDS--NLQPTGYEAQIAEHLGGIRTVSEGR--------------- 545 (811)
Q Consensus 492 ~~V~~l~~s~dg~-~l~s~s----~dg----~I~~wd~--~~~~~~~~~~~~~~~~~v~~l~~~~--------------- 545 (811)
..+....|.+.|. ++++|+ .|| .|++||+ .+++......+..+...++.+++.+
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4566667777664 555665 467 8999999 7776533455677776666665442
Q ss_pred CCeEEEEeCC------CeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCC---eEEEEeCCCCcEEEEecCC
Q psy9770 546 GSQLIVGTTR------NCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDR---IVQLWDSMSHSVVWSKDIA 616 (811)
Q Consensus 546 ~~~l~~~~~~------~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg---~v~iwd~~~~~~~~~~~~~ 616 (811)
+..++.++.+ +.|++||+.......+.+|...+.+++|+|++++|++++.++ .|++||+.+++......+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~ 222 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP 222 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCS
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCC
Confidence 5566665554 799999999888888889999999999999999999999885 9999999999887767778
Q ss_pred CCeEEEEEcCCCCEEE-EEEeCC--eEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEec-CC--cEEEEEecCC
Q psy9770 617 EQAQSATFSPDGSIII-VGCIAG--RWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSR-DN--YIYVYEVSGD 690 (811)
Q Consensus 617 ~~v~~~~~spdg~~la-~g~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~-dg--~I~iwd~~~~ 690 (811)
..+.+++|+|||+.|+ +++.+| .|++||+.+++. ..+..|...+.+++|+|||++|++++. ++ .|++||+.++
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCC
Confidence 8999999999999888 555555 599999998876 566778888999999999999998886 44 5777787765
Q ss_pred CcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCC---ceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCC
Q psy9770 691 SRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGD---YELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPE 767 (811)
Q Consensus 691 ~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~D---g~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 767 (811)
. ...+..|...+.+++|+|||++|++++.+ +.|++||+.+++.... .
T Consensus 302 ~-----~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l-~------------------------ 351 (415)
T 2hqs_A 302 A-----PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL-S------------------------ 351 (415)
T ss_dssp C-----CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC-C------------------------
T ss_pred C-----EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe-c------------------------
Confidence 2 23455677789999999999999988764 6899999998765321 1
Q ss_pred CCCCCccceEEecCCCCEEEEEcCCC---cEEEEeCCCC
Q psy9770 768 GADGTDVNSCERSHDARVIATGDDFG---KLKLYSYPAV 803 (811)
Q Consensus 768 ~~h~~~I~~l~~s~dg~~Las~~~dg---~v~vw~~~~~ 803 (811)
.+ ..+.+++|+|||++|++++.++ .|++|++..+
T Consensus 352 -~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 352 -ST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp -CS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred -CC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 11 2688999999999999888776 7999998754
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=7.6e-25 Score=260.87 Aligned_cols=318 Identities=11% Similarity=0.060 Sum_probs=243.9
Q ss_pred CceEEEEEEcCCCc-EEEEcC-CC-----cEEEEecCCceEEEEeeccccc------------------------ceEEE
Q psy9770 449 PKYVTCLAFTQGGE-VLSGDS-NG-----NIIVWTRGSNTISKFIRNVHEG------------------------SVFSI 497 (811)
Q Consensus 449 ~~~v~~l~~s~~g~-llsg~~-dg-----~I~vwd~~~~~~~~~~~~~h~~------------------------~V~~l 497 (811)
...+.+++|+|||+ +++++. || .|++||+.+++....+. .+.. .|.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD-SKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEEC-GGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccc-hhhcccccccccchhhhhhhhhhhccccCccee
Confidence 45689999999999 556666 77 89999999998877765 3332 38899
Q ss_pred EEecCCcEEEEecCCCcEEEEeCCCC---CccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeee-e
Q psy9770 498 CVLKEGSIISAGGKDGRLLQFDSNLQ---PTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL-G 573 (811)
Q Consensus 498 ~~s~dg~~l~s~s~dg~I~~wd~~~~---~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~-~ 573 (811)
+|+|||++|++++. +.|++||+..+ .. ..+..+...+..++++|++..++...++.|++||+.++....+. .
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~---~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAV---RQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSC---CBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceE---EEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccC
Confidence 99999999998776 99999999877 43 44566677899999999998777777889999999887544333 2
Q ss_pred cccc----------------eEEEEECCCCCeEEEEECCC---------------------------------eEEEEeC
Q psy9770 574 HTDE----------------LWALAAHPSLSQFLTAGFDR---------------------------------IVQLWDS 604 (811)
Q Consensus 574 h~~~----------------v~~l~~sp~~~~l~s~s~dg---------------------------------~v~iwd~ 604 (811)
+... +..++|+|||++|++++.|+ .|.+||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 2222 47899999999999998765 8899999
Q ss_pred CC-CcEEEEe---cCCCCeEEEEEcCCCCEEEEEEe-----CCeEEEEecCCcceeEEecCCCC----CeEEEEEccCCC
Q psy9770 605 MS-HSVVWSK---DIAEQAQSATFSPDGSIIIVGCI-----AGRWLVMDSETREAYSIHTDGNE----PIQVVKFSPDGK 671 (811)
Q Consensus 605 ~~-~~~~~~~---~~~~~v~~~~~spdg~~la~g~~-----dg~i~i~d~~~~~~~~~~~~~~~----~i~~i~~spdg~ 671 (811)
.+ ++..... .+...+..++| |||++|+++.. +..|++||+.+++....+..+.. .+..++|+|||+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~ 349 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS 349 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC
T ss_pred CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe
Confidence 88 7765443 35567899999 99999998765 56899999999987776665443 456899999999
Q ss_pred EEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEE-EeCCCCCeEEE-ecCCc--eEEEEECCC-CcccCCCCCcc
Q psy9770 672 LLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHL-DWSEDSMYIRS-NSGDY--ELLYWNAGT-CRQIPQSSQLR 746 (811)
Q Consensus 672 ~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l-~~spdg~~L~s-~s~Dg--~i~iWd~~~-~~~~~~~~~~~ 746 (811)
++++++.||.++||.++..+. ...+..|...|..+ .|+||++.|+. ++.++ .+++|++.. ++.+..+.
T Consensus 350 ~~~~~~~~g~~~l~~~~~~~~----~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~--- 422 (741)
T 2ecf_A 350 ILWSSERTGFQHLYRIDSKGK----AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS--- 422 (741)
T ss_dssp EEEEECTTSSCEEEEECSSSC----EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC---
T ss_pred EEEEecCCCccEEEEEcCCCC----eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc---
Confidence 999999999999998874322 45677788888887 59999987754 55555 899999864 33222211
Q ss_pred ceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCC----CcEEEEeCCC
Q psy9770 747 DVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDF----GKLKLYSYPA 802 (811)
Q Consensus 747 ~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~d----g~v~vw~~~~ 802 (811)
....+.+++|||||++|+....+ +.+.+|+...
T Consensus 423 -----------------------~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 423 -----------------------KAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp -----------------------CSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred -----------------------cCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence 12347799999999998865433 4688888754
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=1.9e-24 Score=257.47 Aligned_cols=353 Identities=10% Similarity=0.028 Sum_probs=246.9
Q ss_pred cccEEEEEEecCCCCcEEEEEeCCC-Cc-----eEEEEEcccCCCcceEEEeeeCCC-----------------------
Q psy9770 351 ERSISCLSFSKADGGTFLCAVDEGN-DY-----NISVWDWQKSDRGHKITETKCSVD----------------------- 401 (811)
Q Consensus 351 ~~~V~~l~fs~~~dg~~Lasv~~s~-d~-----~i~vWd~~~~~~~~~~~~~~~~~~----------------------- 401 (811)
...|.+++||| ||++|++. +. |+ .|++||+.+++ ....+..+..
T Consensus 36 ~~~~~~~~~Sp--dG~~la~~--~~~d~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (741)
T 2ecf_A 36 GPTLMKPKVAP--DGSRVTFL--RGKDSDRNQLDLWSYDIGSGQ---TRLLVDSKVVLPGTETLSDEEKARRERQRIAAM 108 (741)
T ss_dssp CCCCEEEEECT--TSSEEEEE--ECCSSCTTEEEEEEEETTTCC---EEEEECGGGTC--------------------CC
T ss_pred CCCCCCceEec--CCCEEEEE--eccCCCCcccEEEEEECCCCc---eeEccchhhcccccccccchhhhhhhhhhhccc
Confidence 45689999999 99999984 44 66 99999999987 5555544432
Q ss_pred -cEEEEEecCCCCCeEEEECCCcEEEEEEcCCc--eeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecC
Q psy9770 402 -TVVAAEFHPLDRNNIVTCGKSHINFWTIDAGG--TLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRG 478 (811)
Q Consensus 402 -~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~--~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~ 478 (811)
.|..++|+|+++.+++++. +.|.+|++.++. .+... ..+...+.+++|+|||+.++...++.|++||+.
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l-------~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~ 180 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQL-------THGEGFATDAKLSPKGGFVSFIRGRNLWVIDLA 180 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBC-------CCSSSCEEEEEECTTSSEEEEEETTEEEEEETT
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEc-------ccCCcccccccCCCCCCEEEEEeCCcEEEEecC
Confidence 3789999998887777775 999999998652 22222 445567999999999996544446799999999
Q ss_pred CceEEEEeecccccc----------------eEEEEEecCCcEEEEecCCC-cEEEEeCCCCCccceeeeccccCCeEEE
Q psy9770 479 SNTISKFIRNVHEGS----------------VFSICVLKEGSIISAGGKDG-RLLQFDSNLQPTGYEAQIAEHLGGIRTV 541 (811)
Q Consensus 479 ~~~~~~~~~~~h~~~----------------V~~l~~s~dg~~l~s~s~dg-~I~~wd~~~~~~~~~~~~~~~~~~v~~l 541 (811)
+++...... .+... +..++|+|||+.|++++.|+ .+..|+.. ........+..+
T Consensus 181 ~g~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~--------~~~p~~~~~~~~ 251 (741)
T 2ecf_A 181 SGRQMQLTA-DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRY--------EVYADRTDVIEQ 251 (741)
T ss_dssp TTEEEECCC-CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEE--------EECSSCEEEEEE
T ss_pred CCCEEEecc-CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecC--------CCCCCcccceEe
Confidence 887766554 33322 47899999999988876553 33344310 000011112223
Q ss_pred eeCCCCeEEEEeCCCeEEEEEccC-Cceeeee---ecccceEEEEECCCCCeEEEEEC-----CCeEEEEeCCCCcEEEE
Q psy9770 542 SEGRGSQLIVGTTRNCILVGSLNL-GFSPVVL---GHTDELWALAAHPSLSQFLTAGF-----DRIVQLWDSMSHSVVWS 612 (811)
Q Consensus 542 ~~~~~~~l~~~~~~~~i~~~d~~~-~~~~~~~---~h~~~v~~l~~sp~~~~l~s~s~-----dg~v~iwd~~~~~~~~~ 612 (811)
.+...+. ......|++||+.+ +....+. .|...+..++| |||++|++++. +..|++||+.+++....
T Consensus 252 ~~~~~g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 252 RYPAAGD---ANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVL 327 (741)
T ss_dssp ECCBTTS---CCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEE
T ss_pred ecCCCCC---CCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEE
Confidence 3222211 00112677888877 6444333 47788999999 99999987764 57899999999887665
Q ss_pred ecCC--C---CeEEEEEcCCCCEEEEEEeCCeEEEEecC-CcceeEEecCCCCCeEEE-EEccCCCEEEEEe-cCC--cE
Q psy9770 613 KDIA--E---QAQSATFSPDGSIIIVGCIAGRWLVMDSE-TREAYSIHTDGNEPIQVV-KFSPDGKLLALGS-RDN--YI 682 (811)
Q Consensus 613 ~~~~--~---~v~~~~~spdg~~la~g~~dg~i~i~d~~-~~~~~~~~~~~~~~i~~i-~~spdg~~lasgs-~dg--~I 682 (811)
.... . .+..++|+|||++++++..+|.+.||.+. ++. ...+..+...+..+ .|+|||+.|+..+ .++ .+
T Consensus 328 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~ 406 (741)
T 2ecf_A 328 AHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARES 406 (741)
T ss_dssp EEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCB
T ss_pred EEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceE
Confidence 4322 2 34688999999998888889877777654 344 77777788888887 5999999876544 444 89
Q ss_pred EEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCC----ceEEEEECCCC
Q psy9770 683 YVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGD----YELLYWNAGTC 736 (811)
Q Consensus 683 ~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~D----g~i~iWd~~~~ 736 (811)
+||++...+. ....+.. ...+..++|+|||++|+....+ ..+.+|+...+
T Consensus 407 ~l~~~~~~g~---~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 407 QIYAVPLQGG---QPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp EEEEEETTCC---CCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred EEEEEEcCCC---Ceeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 9999975332 2233444 5678899999999998876543 57899998654
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=8.1e-25 Score=259.88 Aligned_cols=350 Identities=11% Similarity=-0.026 Sum_probs=241.5
Q ss_pred ccceEEccCCcEEEEe-ccEEEEEeCCCCceEE-eccCCC---CeEEEEEcCCCcEEEEeeccCCC-CCCCCCeEEEEeC
Q psy9770 263 RSNLYLLPTGEIVYFV-AAVAVLYNVEEQTQRH-YLGHTD---DIKCLSIHPNKLLIATGQVAGHD-AREGKPHIRIWNS 336 (811)
Q Consensus 263 ~~~l~~spdg~~l~~~-~~~i~i~d~~~~~~~~-~~~h~~---~V~~la~spdg~~Lasg~~dg~~-~~~~~~~I~iWd~ 336 (811)
...++|+|||++++.. ++.|.+||+.+++... +.+|.. .|.+++|||||++||+++.++.. .......|.+||+
T Consensus 19 ~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~ 98 (723)
T 1xfd_A 19 DPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI 98 (723)
T ss_dssp CCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred ccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEEC
Confidence 4678999999988764 3799999999987655 444544 49999999999999999865310 0112248999999
Q ss_pred CCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcE-------------
Q psy9770 337 VSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTV------------- 403 (811)
Q Consensus 337 ~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V------------- 403 (811)
.+++........+|...+..++||| ||++||++. ++.|++||+.+++ .......+...+
T Consensus 99 ~~~~~~~l~~~~~~~~~~~~~~~SP--dG~~la~~~---~~~i~~~~~~~g~---~~~~~~~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 99 PHGDPQSLDPPEVSNAKLQYAGWGP--KGQQLIFIF---ENNIYYCAHVGKQ---AIRVVSTGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp SSCCCEECCCTTCCSCCCSBCCBCS--STTCEEEEE---TTEEEEESSSSSC---CEEEECCCBTTTEEEEECCHHHHHT
T ss_pred CCCceEeccCCccccccccccEECC--CCCEEEEEE---CCeEEEEECCCCc---eEEEecCCCCCceECcccceeEEEE
Confidence 9988733222234555689999999 899999842 3799999999887 555444443333
Q ss_pred -----EEEEecCCCCCeEEEECC-CcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEec
Q psy9770 404 -----VAAEFHPLDRNNIVTCGK-SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTR 477 (811)
Q Consensus 404 -----~~v~fsp~~~~ll~~~~d-~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~ 477 (811)
..++|+|+++.++++..+ +.+.+|++..... .+...+..+.|.++|.. ..+..|++||+
T Consensus 171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~G~~---~~~~~l~~~d~ 235 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG------------SIYPTVKPYHYPKAGSE---NPSISLHVIGL 235 (723)
T ss_dssp TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS------------SSSCCCEEEECCBTTSC---CCEEEEEEEES
T ss_pred eccCcceEEECCCCCEEEEEEECCCccceEEeeccCC------------cCCCcceeccCCCCCCC---CCeeEEEEEEC
Confidence 789999998888887764 5788888752211 01123678888888763 34568999999
Q ss_pred CCceEEEEeeccc------ccceEEEEEecCCcEEEEecC----CCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCC
Q psy9770 478 GSNTISKFIRNVH------EGSVFSICVLKEGSIISAGGK----DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGS 547 (811)
Q Consensus 478 ~~~~~~~~~~~~h------~~~V~~l~~s~dg~~l~s~s~----dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 547 (811)
.+++....+. .+ ...+..++|+|||++|++... +..|++||+.+++...
T Consensus 236 ~~~~~~~~l~-~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~-------------------- 294 (723)
T 1xfd_A 236 NGPTHDLEMM-PPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK-------------------- 294 (723)
T ss_dssp SSSCCCEECC-CCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE--------------------
T ss_pred CCCceeEEee-CCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE--------------------
Confidence 9887655554 33 678999999999998876542 3568888877654400
Q ss_pred eEEEEeCCCeEEEEEccCCceeeee-ecccce----EEEEECCCCCeEEE--EECCC------eEEEEe-CCCCcE--EE
Q psy9770 548 QLIVGTTRNCILVGSLNLGFSPVVL-GHTDEL----WALAAHPSLSQFLT--AGFDR------IVQLWD-SMSHSV--VW 611 (811)
Q Consensus 548 ~l~~~~~~~~i~~~d~~~~~~~~~~-~h~~~v----~~l~~sp~~~~l~s--~s~dg------~v~iwd-~~~~~~--~~ 611 (811)
.+. .+...+ ..++|+|||+.|+. ...++ .|.+|| ..++.. ..
T Consensus 295 ----------------------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (723)
T 1xfd_A 295 ----------------------KHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQ 352 (723)
T ss_dssp ----------------------EEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCC
T ss_pred ----------------------EEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcccee
Confidence 011 112222 26789999997775 44666 577777 444441 22
Q ss_pred Ee-cCCCCeEE-EEEcCCCCEEEEEEeC---CeEEEEecCCcc--eeEEecC---CCCCeEEEEEccCCCEEEEEec
Q psy9770 612 SK-DIAEQAQS-ATFSPDGSIIIVGCIA---GRWLVMDSETRE--AYSIHTD---GNEPIQVVKFSPDGKLLALGSR 678 (811)
Q Consensus 612 ~~-~~~~~v~~-~~~spdg~~la~g~~d---g~i~i~d~~~~~--~~~~~~~---~~~~i~~i~~spdg~~lasgs~ 678 (811)
.+ .....+.. ++|+|||+.|+..+.+ +.+++|++.... ....+.. +...+..++|+|||++|+....
T Consensus 353 ~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 353 SITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp BSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred EeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 22 23344554 6999999999877665 788999886432 3333443 5667889999999999887543
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=1.5e-23 Score=248.25 Aligned_cols=352 Identities=12% Similarity=0.087 Sum_probs=237.2
Q ss_pred ccceEEccCCcEEEEeccEEEEEeCCCCce--EEeccCC-----------------CCeEEEEEcCCCcEEEEeeccCCC
Q psy9770 263 RSNLYLLPTGEIVYFVAAVAVLYNVEEQTQ--RHYLGHT-----------------DDIKCLSIHPNKLLIATGQVAGHD 323 (811)
Q Consensus 263 ~~~l~~spdg~~l~~~~~~i~i~d~~~~~~--~~~~~h~-----------------~~V~~la~spdg~~Lasg~~dg~~ 323 (811)
...+.|+ ++++++..+..| +||+.+++. +.+..|. ..|.+++|||| ++++.+. ++
T Consensus 28 ~~~~~w~-g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~-- 101 (706)
T 2z3z_A 28 VVGLQWM-GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QG-- 101 (706)
T ss_dssp CTTCEEE-TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TT--
T ss_pred CCCCcCc-CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CC--
Confidence 3567777 666777766558 999999887 6666654 56999999999 5555553 36
Q ss_pred CCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEccc-----CCCcceEEEeee
Q psy9770 324 AREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQK-----SDRGHKITETKC 398 (811)
Q Consensus 324 ~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~-----~~~~~~~~~~~~ 398 (811)
.|++||+.+++..... .+...+.+++||| ||++|++ ..++.|++||+.+ ++ .......
T Consensus 102 ------~i~~~d~~~~~~~~l~---~~~~~~~~~~~Sp--dG~~la~---~~~~~i~v~~~~~~~~~~g~---~~~~~~~ 164 (706)
T 2z3z_A 102 ------GLVGFDMLARKVTYLF---DTNEETASLDFSP--VGDRVAY---VRNHNLYIARGGKLGEGMSR---AIAVTID 164 (706)
T ss_dssp ------EEEEEETTTTEEEEEE---CCTTCCTTCEECT--TSSEEEE---EETTEEEEEECBCTTSCCCC---CEESCSC
T ss_pred ------EEEEEECCCCceEEcc---CCcccccCCcCCC--CCCEEEE---EECCeEEEEecCcccccCCC---cEEeccC
Confidence 9999999998776554 4667789999999 8999997 3579999999998 76 4443333
Q ss_pred CCCc--------------EEEEEecCCCCCeEEEE---------------------------------CCCcEEEEEEcC
Q psy9770 399 SVDT--------------VVAAEFHPLDRNNIVTC---------------------------------GKSHINFWTIDA 431 (811)
Q Consensus 399 ~~~~--------------V~~v~fsp~~~~ll~~~---------------------------------~d~~i~iwd~~~ 431 (811)
+... +..+.|+|++..+++++ .+..|.+||+.+
T Consensus 165 ~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~ 244 (706)
T 2z3z_A 165 GTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLAT 244 (706)
T ss_dssp CBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTT
T ss_pred CCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCC
Confidence 3333 47899999999888887 346799999985
Q ss_pred CceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCC-----cEEEEecCCc-eEEEEeeccccc---ceEEEEEec
Q psy9770 432 GGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNG-----NIIVWTRGSN-TISKFIRNVHEG---SVFSICVLK 501 (811)
Q Consensus 432 ~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg-----~I~vwd~~~~-~~~~~~~~~h~~---~V~~l~~s~ 501 (811)
+....... . ..+...+.+++|+|||+ +++++.++ .|++||+.++ .........+.. .+..++|+|
T Consensus 245 ~~~~~~~~----~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp 319 (706)
T 2z3z_A 245 GKTVYLQT----G-EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLP 319 (706)
T ss_dssp TEEEECCC----C-SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECT
T ss_pred CceEeecc----C-CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeec
Confidence 54322111 1 24557799999999999 55655554 8999999998 444333312222 246789999
Q ss_pred --CCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceE
Q psy9770 502 --EGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELW 579 (811)
Q Consensus 502 --dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~ 579 (811)
||++|+++..|+.+++|+++.... ....+..|...+.
T Consensus 320 ~~dg~~l~~~~~~g~~~l~~~~~~~~-----------------------------------------~~~~l~~~~~~v~ 358 (706)
T 2z3z_A 320 GSNNQFIWQSRRDGWNHLYLYDTTGR-----------------------------------------LIRQVTKGEWEVT 358 (706)
T ss_dssp TCSSEEEEEECTTSSCEEEEEETTSC-----------------------------------------EEEECCCSSSCEE
T ss_pred CCCCEEEEEEccCCccEEEEEECCCC-----------------------------------------EEEecCCCCeEEE
Confidence 999999999999888887642111 0112233455566
Q ss_pred E-EEECCCCCeEEEEECC-C----eEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeC----CeEEEEecCCcc
Q psy9770 580 A-LAAHPSLSQFLTAGFD-R----IVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIA----GRWLVMDSETRE 649 (811)
Q Consensus 580 ~-l~~sp~~~~l~s~s~d-g----~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~d----g~i~i~d~~~~~ 649 (811)
. ++|+|+++.|+.++.+ + .|..||+.+++ ...+.+...+.+++|+|||++|+....+ +.|++||+.+++
T Consensus 359 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 359 NFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred eeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 5 7999999988766654 3 67778887766 3344566779999999999999887654 469999998887
Q ss_pred eeEEecCCCCCeEEEEEccCCCEEEEEecCC--cEEEEEe
Q psy9770 650 AYSIHTDGNEPIQVVKFSPDGKLLALGSRDN--YIYVYEV 687 (811)
Q Consensus 650 ~~~~~~~~~~~i~~i~~spdg~~lasgs~dg--~I~iwd~ 687 (811)
...+. +...+....+.+.. .+-.-..|| .+..|-.
T Consensus 438 -~~~~~-~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~ 474 (706)
T 2z3z_A 438 -HTLLE-AKNPDTGYAMPEIR-TGTIMAADGQTPLYYKLT 474 (706)
T ss_dssp -EEEEE-CC------CCCCEE-EEEEECTTSSSEEEEEEE
T ss_pred -Eeecc-ccchhhhcCCCCcE-EEEEEcCCCCEEEEEEEE
Confidence 33333 22334444343322 233334455 5655544
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=2.4e-23 Score=246.42 Aligned_cols=313 Identities=12% Similarity=0.116 Sum_probs=226.6
Q ss_pred EEEEEEcCCCcEEEEcCCCcEEEEecCCceE--EEEeecccc-----------------cceEEEEEecCCcEEEEecCC
Q psy9770 452 VTCLAFTQGGEVLSGDSNGNIIVWTRGSNTI--SKFIRNVHE-----------------GSVFSICVLKEGSIISAGGKD 512 (811)
Q Consensus 452 v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~--~~~~~~~h~-----------------~~V~~l~~s~dg~~l~s~s~d 512 (811)
+..+.|. ++.++.++.+| | +||+.+++. ...+. |. ..|.+++|+|| ..++.+ .+
T Consensus 28 ~~~~~w~-g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~--~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~ 100 (706)
T 2z3z_A 28 VVGLQWM-GDNYVFIEGDD-L-VFNKANGKSAQTTRFS--AADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQ 100 (706)
T ss_dssp CTTCEEE-TTEEEEEETTE-E-EEEC-------CEEEE--HHHHHTTC-----------CCCEEEEETTT-TEEEEE-ET
T ss_pred CCCCcCc-CCeEEEEeCCc-E-EEECCCCcEeeEEeec--hhHhhhhccchhccccccccCceeEEECCC-CeEEEE-EC
Confidence 4456777 55677777788 8 999999987 44333 32 46999999999 444433 45
Q ss_pred CcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccC-----Cceee-eeecccc---------
Q psy9770 513 GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNL-----GFSPV-VLGHTDE--------- 577 (811)
Q Consensus 513 g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~-----~~~~~-~~~h~~~--------- 577 (811)
+.|++||+.++.. ..+..+...+..++++|++..++...++.|++|++.+ +.... ...+...
T Consensus 101 ~~i~~~d~~~~~~---~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 101 GGLVGFDMLARKV---TYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp TEEEEEETTTTEE---EEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGG
T ss_pred CEEEEEECCCCce---EEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhh
Confidence 9999999987654 3444455668888999998777767889999999987 54333 2333332
Q ss_pred -----eEEEEECCCCCeEEEEE---------------------------------CCCeEEEEeCCCCcEEEEe---cCC
Q psy9770 578 -----LWALAAHPSLSQFLTAG---------------------------------FDRIVQLWDSMSHSVVWSK---DIA 616 (811)
Q Consensus 578 -----v~~l~~sp~~~~l~s~s---------------------------------~dg~v~iwd~~~~~~~~~~---~~~ 616 (811)
+.+++|+|||++|++++ .+..|++||+.+++..... .+.
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 257 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE 257 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCc
Confidence 47899999999999987 4578999999998865543 344
Q ss_pred CCeEEEEEcCCCCEEEEEEeCC-----eEEEEecCCcc-eeEEecC-CC---CCeEEEEEcc--CCCEEEEEecCCcEEE
Q psy9770 617 EQAQSATFSPDGSIIIVGCIAG-----RWLVMDSETRE-AYSIHTD-GN---EPIQVVKFSP--DGKLLALGSRDNYIYV 684 (811)
Q Consensus 617 ~~v~~~~~spdg~~la~g~~dg-----~i~i~d~~~~~-~~~~~~~-~~---~~i~~i~~sp--dg~~lasgs~dg~I~i 684 (811)
..+.+++|+|||+.|++++.++ .|.+||+.+++ ....... +. ..+..++|+| ||++|++++.|+.++|
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l 337 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHL 337 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEE
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEE
Confidence 6789999999999999988776 89999999983 3332221 22 2346789999 9999999999999999
Q ss_pred EEecCCCcceeEEEEecCCCCCeeE-EEeCCCCCeEEEecC-Cc----eEEEEECCCCcccCCCCCccceeEeccceeec
Q psy9770 685 YEVSGDSRKYSRVGRCTGHSSFITH-LDWSEDSMYIRSNSG-DY----ELLYWNAGTCRQIPQSSQLRDVVWESNSCTLT 758 (811)
Q Consensus 685 wd~~~~~~~~~~~~~~~~h~~~V~~-l~~spdg~~L~s~s~-Dg----~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (811)
|.+.... ..+..+..|...+.. ++|+||++.|+.++. ++ .|..||+.+++.. .+
T Consensus 338 ~~~~~~~---~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~-~l---------------- 397 (706)
T 2z3z_A 338 YLYDTTG---RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK-DL---------------- 397 (706)
T ss_dssp EEEETTS---CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCE-ES----------------
T ss_pred EEEECCC---CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCce-ec----------------
Confidence 9987322 344566778888877 899999988765544 44 6777787766421 11
Q ss_pred cceeeeCCCCCCCCccceEEecCCCCEEEEEcCC----CcEEEEeCCCCC
Q psy9770 759 FTTIGIWPEGADGTDVNSCERSHDARVIATGDDF----GKLKLYSYPAVQ 804 (811)
Q Consensus 759 ~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~d----g~v~vw~~~~~~ 804 (811)
.+...+.+++|||||++|+.+..+ +.|++|++.+++
T Consensus 398 ----------~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 398 ----------TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ----------CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred ----------cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 124458899999999988876433 569999998765
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=6.7e-24 Score=251.98 Aligned_cols=360 Identities=9% Similarity=0.024 Sum_probs=248.7
Q ss_pred ccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCC---cEEEEEecCCCCCeEEEECC-------
Q psy9770 352 RSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVD---TVVAAEFHPLDRNNIVTCGK------- 421 (811)
Q Consensus 352 ~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~---~V~~v~fsp~~~~ll~~~~d------- 421 (811)
..+.+++|+| ||+++++ +.|++|++||+.+++ ....+..|.. .|..++|+|+++.++++..+
T Consensus 17 ~~~~~~~~sp--dg~~~~~---~~dg~i~~~d~~~g~---~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~ 88 (723)
T 1xfd_A 17 IHDPEAKWIS--DTEFIYR---EQKGTVRLWNVETNT---STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHS 88 (723)
T ss_dssp CCCCCCCBSS--SSCBCCC---CSSSCEEEBCGGGCC---CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSC
T ss_pred ccccccEEcC--CCcEEEE---eCCCCEEEEECCCCc---EEEEeccccccccccceEEECCCCCEEEEEecCccceeec
Confidence 4467899999 8897764 679999999999998 6666666654 49999999998888888764
Q ss_pred --CcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccce-----
Q psy9770 422 --SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSV----- 494 (811)
Q Consensus 422 --~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V----- 494 (811)
+.+.+||+.++.. .... ....+...+.+++|+|||+.++...++.|++||+.+++...... .+...+
T Consensus 89 ~~~~i~~~d~~~~~~-~~l~----~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~-~~~~~~~~~g~ 162 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDP-QSLD----PPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVS-TGKEGVIYNGL 162 (723)
T ss_dssp CCSEEEEEESSSCCC-EECC----CTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEEC-CCBTTTEEEEE
T ss_pred ceeeEEEEECCCCce-Eecc----CCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEec-CCCCCceECcc
Confidence 6788999986653 2211 11334445788999999984433334899999999888776655 333333
Q ss_pred -------------EEEEEecCCcEEEEecCC-CcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEE
Q psy9770 495 -------------FSICVLKEGSIISAGGKD-GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILV 560 (811)
Q Consensus 495 -------------~~l~~s~dg~~l~s~s~d-g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~ 560 (811)
.+++|+|||+.|++++.| +.+.+|++..... .....+..+.+.+++.. .....|++
T Consensus 163 ~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~G~~---~~~~~l~~ 232 (723)
T 1xfd_A 163 SDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG-------SIYPTVKPYHYPKAGSE---NPSISLHV 232 (723)
T ss_dssp CCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS-------SSSCCCEEEECCBTTSC---CCEEEEEE
T ss_pred cceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC-------cCCCcceeccCCCCCCC---CCeeEEEE
Confidence 789999999999887755 4677777643221 12234666776665542 23358999
Q ss_pred EEccCCce-eeeeec------ccceEEEEECCCCCeEEEEEC----CCeEEEEeCCCCcEEEEe--cCCCCe----EEEE
Q psy9770 561 GSLNLGFS-PVVLGH------TDELWALAAHPSLSQFLTAGF----DRIVQLWDSMSHSVVWSK--DIAEQA----QSAT 623 (811)
Q Consensus 561 ~d~~~~~~-~~~~~h------~~~v~~l~~sp~~~~l~s~s~----dg~v~iwd~~~~~~~~~~--~~~~~v----~~~~ 623 (811)
||+.++.. ..+..+ ...+..++|+|||++|++... +..|++||+.++++.... .+...+ ..++
T Consensus 233 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 312 (723)
T 1xfd_A 233 IGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPV 312 (723)
T ss_dssp EESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCE
T ss_pred EECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCce
Confidence 99988753 444443 568999999999998877653 357999999998866553 223333 3789
Q ss_pred EcCCCCEEEEE--EeCC------eEEEEe-cCCcc--eeEEecCCCCCeEE-EEEccCCCEEEEEecC---CcEEEEEec
Q psy9770 624 FSPDGSIIIVG--CIAG------RWLVMD-SETRE--AYSIHTDGNEPIQV-VKFSPDGKLLALGSRD---NYIYVYEVS 688 (811)
Q Consensus 624 ~spdg~~la~g--~~dg------~i~i~d-~~~~~--~~~~~~~~~~~i~~-i~~spdg~~lasgs~d---g~I~iwd~~ 688 (811)
|+|||+.|+.. ..++ .|.+|| ...++ ....+..+...+.. ++|+|||++|+..+.+ +.++||++.
T Consensus 313 ~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 313 FSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp ECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred EcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 99999987764 4566 577788 34444 14455544444554 6999999999876665 789999997
Q ss_pred CCCcceeEEEEecC---CCCCeeEEEeCCCCCeEEEecCC-c--eEEEEECCCCc
Q psy9770 689 GDSRKYSRVGRCTG---HSSFITHLDWSEDSMYIRSNSGD-Y--ELLYWNAGTCR 737 (811)
Q Consensus 689 ~~~~~~~~~~~~~~---h~~~V~~l~~spdg~~L~s~s~D-g--~i~iWd~~~~~ 737 (811)
..+.. ....+.. |...+..++|+|||++|+..... . ...+++..+++
T Consensus 393 ~~~~~--~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~~ 445 (723)
T 1xfd_A 393 TVGNF--NRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKK 445 (723)
T ss_dssp SSTTC--CCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCC
T ss_pred CCCCC--CcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCCC
Confidence 64321 1112333 67778999999999988765332 2 23445554444
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=5.3e-22 Score=211.55 Aligned_cols=288 Identities=12% Similarity=0.102 Sum_probs=200.9
Q ss_pred EEcCCCc--EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecC-CCcEEEEeCCCCCccceeeec
Q psy9770 456 AFTQGGE--VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK-DGRLLQFDSNLQPTGYEAQIA 532 (811)
Q Consensus 456 ~~s~~g~--llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~-dg~I~~wd~~~~~~~~~~~~~ 532 (811)
.|.+++. +++...++.|.+||..+++....+. .+...+ .++|+|+|+++++++. ++.|.+||+..+.. ..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~---- 76 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQIT-LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP-KV---- 76 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE-CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC-EE----
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEE-ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce-eE----
Confidence 4555544 4588899999999999999888877 556666 9999999986655554 88999999876553 00
Q ss_pred cccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCC---eEEEEeCCCCcE
Q psy9770 533 EHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDR---IVQLWDSMSHSV 609 (811)
Q Consensus 533 ~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg---~v~iwd~~~~~~ 609 (811)
..+..+..+..+++|+|++++++++..++ .|.+||+.+++.
T Consensus 77 ------------------------------------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 77 ------------------------------------VAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF 120 (331)
T ss_dssp ------------------------------------EEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE
T ss_pred ------------------------------------EecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe
Confidence 11223334444589999999998555553 899999999998
Q ss_pred EEEecCCCCeEEEEEcCCCCEEEEEEe-CCe-EEEEecCCccee----EEecCCCCCeEEEEEccCCCEEEEEe-cCCcE
Q psy9770 610 VWSKDIAEQAQSATFSPDGSIIIVGCI-AGR-WLVMDSETREAY----SIHTDGNEPIQVVKFSPDGKLLALGS-RDNYI 682 (811)
Q Consensus 610 ~~~~~~~~~v~~~~~spdg~~la~g~~-dg~-i~i~d~~~~~~~----~~~~~~~~~i~~i~~spdg~~lasgs-~dg~I 682 (811)
+..+.....+.+++|+|||++|+++.. ++. |.+|++.....+ ............++|+|||++|++++ .++.|
T Consensus 121 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 200 (331)
T 3u4y_A 121 ISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSI 200 (331)
T ss_dssp EEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeE
Confidence 888877788899999999986666554 477 999998754332 11123345678999999999766554 68899
Q ss_pred EEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEec-CCceEEEEECCCCcccCCCCCccceeEeccceeeccce
Q psy9770 683 YVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNS-GDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTT 761 (811)
Q Consensus 683 ~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s-~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (811)
++||+.++.. ...+..+.. ...+..++|+|||++|+++. .++.|.+||+.+++.........
T Consensus 201 ~v~d~~~~~~-~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~--------------- 263 (331)
T 3u4y_A 201 GILETQNPEN-ITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGH--------------- 263 (331)
T ss_dssp EEEECSSTTS-CEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEEC---------------
T ss_pred EEEECCCCcc-cceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccc---------------
Confidence 9999987643 122444443 36678999999999776554 57899999999887521000000
Q ss_pred eeeCCCCCCCCccceEEecCCCCEEEEE-cCCCcEEEEeCCCCC
Q psy9770 762 IGIWPEGADGTDVNSCERSHDARVIATG-DDFGKLKLYSYPAVQ 804 (811)
Q Consensus 762 ~~i~~~~~h~~~I~~l~~s~dg~~Las~-~~dg~v~vw~~~~~~ 804 (811)
.+..........+.++|+|||++|+++ ..++.|.||++....
T Consensus 264 -~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 264 -GLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp -CCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred -ccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 000000011123669999999988654 556799999998654
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=5.6e-22 Score=212.06 Aligned_cols=269 Identities=14% Similarity=0.171 Sum_probs=194.5
Q ss_pred EEcCCCcEEEEecC-Cce--EEEEeecccccceEEEEEecCCcEEEEecCC-CcEEEEeCC--CCCccceeeeccccCCe
Q psy9770 465 SGDSNGNIIVWTRG-SNT--ISKFIRNVHEGSVFSICVLKEGSIISAGGKD-GRLLQFDSN--LQPTGYEAQIAEHLGGI 538 (811)
Q Consensus 465 sg~~dg~I~vwd~~-~~~--~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~d-g~I~~wd~~--~~~~~~~~~~~~~~~~v 538 (811)
+++.++.|++|++. ++. ....+ .|...+.+++|+|+|++|++++.+ +.|.+|+++ .+.......+... ..+
T Consensus 10 ~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~ 86 (343)
T 1ri6_A 10 ASPESQQIHVWNLNHEGALTLTQVV--DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSL 86 (343)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEE--ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCC
T ss_pred eCCCCCeEEEEEECCCCcEEEeeeE--ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCC
Confidence 55789999999985 343 33333 577889999999999988877776 999999997 4444223333333 377
Q ss_pred EEEeeCCCCe-EEEEeC-CCeEEEEEccCC---ceeeeeecccceEEEEECCCCCeEEEEE-CCCeEEEEeCCC-CcEEE
Q psy9770 539 RTVSEGRGSQ-LIVGTT-RNCILVGSLNLG---FSPVVLGHTDELWALAAHPSLSQFLTAG-FDRIVQLWDSMS-HSVVW 611 (811)
Q Consensus 539 ~~l~~~~~~~-l~~~~~-~~~i~~~d~~~~---~~~~~~~h~~~v~~l~~sp~~~~l~s~s-~dg~v~iwd~~~-~~~~~ 611 (811)
..+++++++. ++++.. ++.|.+|++..+ ...........+.+++|+|+++++++++ .++.|.+||+.+ ++...
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 8899999876 545544 788999999422 2222223344688999999999888887 899999999987 65432
Q ss_pred ------EecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecCC--cce--eEEec---CC---CCCeEEEEEccCCCEEE
Q psy9770 612 ------SKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSET--REA--YSIHT---DG---NEPIQVVKFSPDGKLLA 674 (811)
Q Consensus 612 ------~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~~--~~~--~~~~~---~~---~~~i~~i~~spdg~~la 674 (811)
.......+..++|+|+|++|++++ .++.|.+||+.. ++. ...+. .. ...+..++|+|||++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 167 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence 223345788999999999877665 789999999953 432 22222 11 23567899999999887
Q ss_pred EEe-cCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEec-CCceEEEEEC--CCCc
Q psy9770 675 LGS-RDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNS-GDYELLYWNA--GTCR 737 (811)
Q Consensus 675 sgs-~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s-~Dg~i~iWd~--~~~~ 737 (811)
++. .++.|++|++.......+.+..+..+.. +.+++|+|+|++|++++ .++.|.+|++ .+++
T Consensus 247 v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 247 ACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp EEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred EEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCce
Confidence 554 7899999999853334455556655554 88999999999888877 6899999954 4554
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=2e-22 Score=214.98 Aligned_cols=276 Identities=14% Similarity=0.078 Sum_probs=208.7
Q ss_pred EEEEcCCCcEEEEecCCceEEEEeeccccc-ceEEEEEecCCcEE-EEecCCCcEEEEeCCCCCccceeeeccccCCeEE
Q psy9770 463 VLSGDSNGNIIVWTRGSNTISKFIRNVHEG-SVFSICVLKEGSII-SAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRT 540 (811)
Q Consensus 463 llsg~~dg~I~vwd~~~~~~~~~~~~~h~~-~V~~l~~s~dg~~l-~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~ 540 (811)
+++++.++.|.+||+.+++....+...+.. .+..++|+|+|+.+ +++..++.|.+||+.+++.........
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~------- 76 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST------- 76 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB-------
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC-------
Confidence 568889999999999999988877623322 48899999999755 556678899999997765411111000
Q ss_pred EeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEE------------CCCeEEEEeCCCCc
Q psy9770 541 VSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAG------------FDRIVQLWDSMSHS 608 (811)
Q Consensus 541 l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s------------~dg~v~iwd~~~~~ 608 (811)
. ..|...+.+++|+|++++++++. .++.|.+||+.+++
T Consensus 77 -----~-------------------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~ 126 (337)
T 1pby_B 77 -----P-------------------------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS 126 (337)
T ss_dssp -----T-------------------------TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE
T ss_pred -----c-------------------------ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc
Confidence 0 00122455788999999888886 57999999999998
Q ss_pred EEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCC--------
Q psy9770 609 VVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDN-------- 680 (811)
Q Consensus 609 ~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg-------- 680 (811)
.+..+.....+.+++|+|+|++|+++ ++.|.+||+.+++.+..+..+... ..+.|+|||++|+..+..+
T Consensus 127 ~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~ 203 (337)
T 1pby_B 127 RRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFY 203 (337)
T ss_dssp EEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEE
T ss_pred EEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeee
Confidence 88877777788999999999988887 789999999999888777654311 1237899998776654332
Q ss_pred ----------------cEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCC
Q psy9770 681 ----------------YIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQ 744 (811)
Q Consensus 681 ----------------~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~ 744 (811)
.|.+||+.++... ...+..+...+.+++|+||+++|+++ ++.|.+||+.+++.+..+.
T Consensus 204 ~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~- 277 (337)
T 1pby_B 204 TARKDIDPADPTAYRTGLLTMDLETGEMA---MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP- 277 (337)
T ss_dssp EEBTTSCTTSGGGEEEEEEEEETTTCCEE---EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-
T ss_pred ccccccccccccccccceEEEeCCCCCce---EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec-
Confidence 4688998876432 23345566788899999999999988 7899999999887654321
Q ss_pred ccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCCCCCcc
Q psy9770 745 LRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQPKLCL 809 (811)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~~~~~ 809 (811)
....+.+++|+|||++|++++.++.|++||+.+++.+..+
T Consensus 278 -------------------------~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 278 -------------------------LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp -------------------------CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred -------------------------CCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEE
Confidence 1235789999999999999999999999999998766544
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=2.5e-21 Score=206.37 Aligned_cols=279 Identities=11% Similarity=0.098 Sum_probs=200.0
Q ss_pred EEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC-CCcEEEEEEcCCce-e
Q psy9770 358 SFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG-KSHINFWTIDAGGT-L 435 (811)
Q Consensus 358 ~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~-d~~i~iwd~~~~~~-~ 435 (811)
.|.+ ++.+++.. +..++.|.+||..+++ .+..+..+...+ .++|+|+++.+++++. ++.|.+||+.++.. .
T Consensus 4 ~~~~--~~~~~~v~-~~~~~~v~~~d~~~~~---~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 4 MFQT--TSNFGIVV-EQHLRRISFFSTDTLE---ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV 76 (331)
T ss_dssp ---C--CCCEEEEE-EGGGTEEEEEETTTCC---EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEE
T ss_pred eEcC--CCCEEEEE-ecCCCeEEEEeCcccc---eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE
Confidence 4555 44444322 6789999999999998 777777766677 9999999888888877 78999999987665 3
Q ss_pred eeecccccccCCCCceEEEEEEcCCCcEE-EEcCCC---cEEEEecCCceEEEEeecccccceEEEEEecCCcEEE-Eec
Q psy9770 436 YKKQGIFEMIRDKPKYVTCLAFTQGGEVL-SGDSNG---NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIIS-AGG 510 (811)
Q Consensus 436 ~~~~~~~~~l~~~~~~v~~l~~s~~g~ll-sg~~dg---~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~-s~s 510 (811)
... ..+.....+++|+|+|+++ ++..++ .|.+||+.+++.+..+. +.....+++|+|+|++|+ +..
T Consensus 77 ~~~-------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 77 VAI-------QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp EEE-------EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEE
T ss_pred Eec-------ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEec
Confidence 222 1122334459999999954 444442 89999999999888776 445578999999998554 445
Q ss_pred CCCc-EEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCe
Q psy9770 511 KDGR-LLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQ 589 (811)
Q Consensus 511 ~dg~-I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~ 589 (811)
.++. |.+|++..... .... . .........+..++|+|++++
T Consensus 148 ~~~~~i~~~~~~~~g~--~~~~--------------------------------~----~~~~~~~~~~~~~~~spdg~~ 189 (331)
T 3u4y_A 148 SSANTVRRFKIDADGV--LFDT--------------------------------G----QEFISGGTRPFNITFTPDGNF 189 (331)
T ss_dssp TTTTEEEEEEECTTCC--EEEE--------------------------------E----EEEECSSSSEEEEEECTTSSE
T ss_pred CCCceEEEEEECCCCc--Eeec--------------------------------C----CccccCCCCccceEECCCCCE
Confidence 5578 99999874322 0000 0 000122334678999999996
Q ss_pred EEEEE-CCCeEEEEeCCCCcE---EEEecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecCCcce--eEEecCC----C
Q psy9770 590 FLTAG-FDRIVQLWDSMSHSV---VWSKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSETREA--YSIHTDG----N 658 (811)
Q Consensus 590 l~s~s-~dg~v~iwd~~~~~~---~~~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~~~~~--~~~~~~~----~ 658 (811)
++.++ .++.|.+||+.+++. +..+.....+..++|+|||++|+++. .++.|.+||+.+++. +..+..+ .
T Consensus 190 l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 269 (331)
T 3u4y_A 190 AFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDP 269 (331)
T ss_dssp EEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCC
T ss_pred EEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCC
Confidence 65554 689999999999887 77777778889999999999887665 467899999998876 3333322 2
Q ss_pred CC---eEEEEEccCCCEEEEEec-CCcEEEEEecCC
Q psy9770 659 EP---IQVVKFSPDGKLLALGSR-DNYIYVYEVSGD 690 (811)
Q Consensus 659 ~~---i~~i~~spdg~~lasgs~-dg~I~iwd~~~~ 690 (811)
.. ...++|+|||++|++++. ++.|.+||+...
T Consensus 270 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 270 RPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp GGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred CCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 22 245899999998876655 569999999874
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=7.4e-22 Score=205.90 Aligned_cols=254 Identities=12% Similarity=0.068 Sum_probs=196.6
Q ss_pred EEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCC-CCccceeeeccc-cCCeEEEe
Q psy9770 465 SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNL-QPTGYEAQIAEH-LGGIRTVS 542 (811)
Q Consensus 465 sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~-~~~~~~~~~~~~-~~~v~~l~ 542 (811)
.++.++.|++||+.+++..... .|...|.+++|+|+|++|++++ ++.|++||+.. ... ......+ ...+.+++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~--~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVW--QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP--EKVDTGFATICNNDHG 91 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEE--EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC--EECCCTTCCCBCSCCE
T ss_pred CCCcceeEEEEeCCCCceeeec--cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc--eEeccccccccccceE
Confidence 4567899999999998877554 5889999999999999999776 88999999988 655 2222233 36678899
Q ss_pred eCCCCeEEEEeC-----CCeEEEEEccCCceeeeeecccceEEEEECCCCCeEE-EEECCCeEEEEeC--CCCcEEEEec
Q psy9770 543 EGRGSQLIVGTT-----RNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFL-TAGFDRIVQLWDS--MSHSVVWSKD 614 (811)
Q Consensus 543 ~~~~~~l~~~~~-----~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~-s~s~dg~v~iwd~--~~~~~~~~~~ 614 (811)
+++++..++... ...|+.++...+....+..+. .+..++|+|++++|+ +++.++.++||++ .+++......
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH 170 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc
Confidence 999876555433 346666666665544444443 488999999999877 7778999999985 4555554456
Q ss_pred CCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecC-CcceeEEecCCCCCeEEEEEccCCCEEEEEecC-----------Cc
Q psy9770 615 IAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSE-TREAYSIHTDGNEPIQVVKFSPDGKLLALGSRD-----------NY 681 (811)
Q Consensus 615 ~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~-~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~d-----------g~ 681 (811)
+...+.+++|+|+|++|++++ .++.+.+|++. .+..+..+..+...+..++|+|||++|++++.+ +.
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 678899999999999888776 48899999886 556667777788889999999999999988766 56
Q ss_pred EEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCc
Q psy9770 682 IYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDY 726 (811)
Q Consensus 682 I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg 726 (811)
|++||+.++.. ..+..+.+|...+.+++|+||+++|++++.|.
T Consensus 251 l~~~d~~~~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 251 VQLMDMDGGNV--ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEETTSCSC--EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEecCCCCc--eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 99999987632 34445567888999999999999998887653
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=2.1e-21 Score=207.61 Aligned_cols=272 Identities=11% Similarity=0.112 Sum_probs=191.3
Q ss_pred EEEEecCCCcEEEEeCCC-CCccceeeeccccCCeEEEeeCCCCe-EEEEeCC-CeEEEEEcc--CCceeee--eecccc
Q psy9770 505 IISAGGKDGRLLQFDSNL-QPTGYEAQIAEHLGGIRTVSEGRGSQ-LIVGTTR-NCILVGSLN--LGFSPVV--LGHTDE 577 (811)
Q Consensus 505 ~l~s~s~dg~I~~wd~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~-l~~~~~~-~~i~~~d~~--~~~~~~~--~~h~~~ 577 (811)
++++++.|+.|++||++. +.. .......+...+..+++++++. ++++..+ +.|.+|++. ++....+ ......
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGAL-TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCE-EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSC
T ss_pred EEEeCCCCCeEEEEEECCCCcE-EEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCC
Confidence 445557899999999963 222 2233344666788899999876 6666665 899999997 4432222 122337
Q ss_pred eEEEEECCCCCeEEEEEC-CCeEEEEeCC---CCcEEEEecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecCC-ccee
Q psy9770 578 LWALAAHPSLSQFLTAGF-DRIVQLWDSM---SHSVVWSKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSET-REAY 651 (811)
Q Consensus 578 v~~l~~sp~~~~l~s~s~-dg~v~iwd~~---~~~~~~~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~~-~~~~ 651 (811)
+..++|+|++++|++++. ++.|.+||+. ..+.+........+.+++|+|+|++|++++ .++.|.+||+.+ ++..
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 889999999998877765 8899999994 444555556667799999999999998887 899999999987 6543
Q ss_pred E----Eec-CCCCCeEEEEEccCCCEEEEEe-cCCcEEEEEecCCCcceeEEEEec----CC--CCCeeEEEeCCCCCeE
Q psy9770 652 S----IHT-DGNEPIQVVKFSPDGKLLALGS-RDNYIYVYEVSGDSRKYSRVGRCT----GH--SSFITHLDWSEDSMYI 719 (811)
Q Consensus 652 ~----~~~-~~~~~i~~i~~spdg~~lasgs-~dg~I~iwd~~~~~~~~~~~~~~~----~h--~~~V~~l~~spdg~~L 719 (811)
. .+. .....+..++|+|+|++|++++ .++.|++|++.............. ++ ...+..++|+|||++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l 245 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL 245 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE
Confidence 2 222 2345788999999999776655 789999999965322222222222 11 2357789999999887
Q ss_pred E-EecCCceEEEEECCC--CcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEc-CCCcE
Q psy9770 720 R-SNSGDYELLYWNAGT--CRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGD-DFGKL 795 (811)
Q Consensus 720 ~-s~s~Dg~i~iWd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~-~dg~v 795 (811)
+ ++..++.|.+|++.. ++. .... ..+ . ...+.+++|+|+|++|++++ .++.|
T Consensus 246 ~v~~~~~~~i~v~d~~~~~~~~-~~~~--------------------~~~--~-~~~~~~~~~s~dg~~l~~~~~~~~~v 301 (343)
T 1ri6_A 246 YACDRTASLITVFSVSEDGSVL-SKEG--------------------FQP--T-ETQPRGFNVDHSGKYLIAAGQKSHHI 301 (343)
T ss_dssp EEEETTTTEEEEEEECTTSCCE-EEEE--------------------EEE--C-SSSCCCEEECTTSSEEEEECTTTCEE
T ss_pred EEEecCCCEEEEEEEcCCCCce-EEee--------------------eec--C-CCccceEEECCCCCEEEEecCCCCeE
Confidence 7 555799999999973 221 1000 000 0 22388999999999888887 68999
Q ss_pred EEEeCC
Q psy9770 796 KLYSYP 801 (811)
Q Consensus 796 ~vw~~~ 801 (811)
.+|+++
T Consensus 302 ~v~~~d 307 (343)
T 1ri6_A 302 SVYEIV 307 (343)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999655
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=5.2e-21 Score=205.59 Aligned_cols=275 Identities=8% Similarity=0.046 Sum_probs=205.0
Q ss_pred eEEEEEEcCCCc-EEEEcC-------CCcEEEEecCCceEEEEeecccccceEEEEEecCCcE-EEEecCCCcEEEEeCC
Q psy9770 451 YVTCLAFTQGGE-VLSGDS-------NGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSI-ISAGGKDGRLLQFDSN 521 (811)
Q Consensus 451 ~v~~l~~s~~g~-llsg~~-------dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~-l~s~s~dg~I~~wd~~ 521 (811)
.+..++|+|+|+ +++++. ++.|.+||..+++....+. ....+..++|+++|+. +++...++.|.+||..
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH--NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE--ESSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe--cCCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 477899999997 444442 6789999999999888876 3455788999999985 4555668999999998
Q ss_pred CCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEE--CCCeE
Q psy9770 522 LQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAG--FDRIV 599 (811)
Q Consensus 522 ~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s--~dg~v 599 (811)
+++.......... .. ........+.+++|+|+++++++++ .++.|
T Consensus 120 ~~~~~~~~~~~~~--------------------------------~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i 166 (353)
T 3vgz_A 120 TGEVKGRLVLDDR--------------------------------KR-TEEVRPLQPRELVADDATNTVYISGIGKESVI 166 (353)
T ss_dssp TCCEEEEEESCCC--------------------------------CC-CSSCCCCEEEEEEEETTTTEEEEEEESSSCEE
T ss_pred CCeeEEEEecCCC--------------------------------cc-ccccCCCCCceEEECCCCCEEEEEecCCCceE
Confidence 7665111111000 00 0000112367899999999877776 47899
Q ss_pred EEEeCCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecC----CCCCeEEEEEccCCCEEE
Q psy9770 600 QLWDSMSHSVVWSKD-IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTD----GNEPIQVVKFSPDGKLLA 674 (811)
Q Consensus 600 ~iwd~~~~~~~~~~~-~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~i~~spdg~~la 674 (811)
.+||..+++.+..+. ....+.+++|+|+|++|+++..++.|.+||+.+++.+..+.. +...+..++|+|||++|+
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp EEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred EEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 999999999988877 566689999999999999999999999999999988877654 455678899999999887
Q ss_pred EEecC-CcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEe-cCCceEEEEECCCCcccCCCCCccceeEec
Q psy9770 675 LGSRD-NYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSN-SGDYELLYWNAGTCRQIPQSSQLRDVVWES 752 (811)
Q Consensus 675 sgs~d-g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~-s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~ 752 (811)
+++.+ +.|++||+.++. .+..+..+. ...++|+||+++|+++ ..++.|.+||+.+++.+..+.
T Consensus 247 ~~~~~~~~v~~~d~~~~~----~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~--------- 311 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGN----ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD--------- 311 (353)
T ss_dssp EEESSSSEEEEEETTTCC----EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE---------
T ss_pred EEeCCCCEEEEEECCCCc----EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe---------
Confidence 77654 899999998763 333333322 2579999999965554 478999999999887654321
Q ss_pred cceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCC
Q psy9770 753 NSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDF 792 (811)
Q Consensus 753 ~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~d 792 (811)
....+.+++|+|||++|+++..+
T Consensus 312 -----------------~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 312 -----------------TPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -----------------CCSEEEEEEECTTSCEEEEEEEC
T ss_pred -----------------cCCCCCeEEEcCCCCEEEEEEcc
Confidence 13357899999999977776655
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.9e-20 Score=201.15 Aligned_cols=280 Identities=13% Similarity=0.038 Sum_probs=212.9
Q ss_pred CCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCc
Q psy9770 298 HTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDY 377 (811)
Q Consensus 298 h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~ 377 (811)
....+..++|+|||++|++++.++. .......|.+||..+++.+..+.. ...+..++|+| +|+++++. +..++
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~-~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~--dg~~l~v~-~~~~~ 111 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSR-KLDKGGVVYRLDPVTLEVTQAIHN---DLKPFGATINN--TTQTLWFG-NTVNS 111 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCT-TTEESEEEEEECTTTCCEEEEEEE---SSCCCSEEEET--TTTEEEEE-ETTTT
T ss_pred hccCccceEECCCCCEEEEEcCCCc-CCCCCccEEEEcCCCCeEEEEEec---CCCcceEEECC--CCCEEEEE-ecCCC
Confidence 3457889999999999988875421 000122899999999999988863 34578899999 78866543 56789
Q ss_pred eEEEEEcccCCCcceEEEeeeCCCc---------EEEEEecCCCCCeEEEE-C-CCcEEEEEEcCCceeeeecccccccC
Q psy9770 378 NISVWDWQKSDRGHKITETKCSVDT---------VVAAEFHPLDRNNIVTC-G-KSHINFWTIDAGGTLYKKQGIFEMIR 446 (811)
Q Consensus 378 ~i~vWd~~~~~~~~~~~~~~~~~~~---------V~~v~fsp~~~~ll~~~-~-d~~i~iwd~~~~~~~~~~~~~~~~l~ 446 (811)
.|.+||.++++ .+..+..+... +..++|+|+++.++++. + ++.|.+||..+++......
T Consensus 112 ~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~------- 181 (353)
T 3vgz_A 112 AVTAIDAKTGE---VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ------- 181 (353)
T ss_dssp EEEEEETTTCC---EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-------
T ss_pred EEEEEeCCCCe---eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-------
Confidence 99999999998 77777665432 78899999988888887 3 6889999998766554432
Q ss_pred CCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeec---ccccceEEEEEecCCcEEEEecC-CCcEEEEeCC
Q psy9770 447 DKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRN---VHEGSVFSICVLKEGSIISAGGK-DGRLLQFDSN 521 (811)
Q Consensus 447 ~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~---~h~~~V~~l~~s~dg~~l~s~s~-dg~I~~wd~~ 521 (811)
.+...+.+++|+|+|+ +++++.++.|.+||..+++....+.. ++...+..++|+|+|+.++.++. ++.|.+||..
T Consensus 182 ~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 261 (353)
T 3vgz_A 182 NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTR 261 (353)
T ss_dssp CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT
T ss_pred CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 1223367899999998 56888899999999999998877762 24556888999999987665554 5899999987
Q ss_pred CCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEE-CCCeEE
Q psy9770 522 LQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAG-FDRIVQ 600 (811)
Q Consensus 522 ~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s-~dg~v~ 600 (811)
+.+... .+. .. ....++|+|++++++.+. .++.|.
T Consensus 262 ~~~~~~--~~~----------------------------------------~~--~~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 262 NGNILA--KVA----------------------------------------AP--ESLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp TCCEEE--EEE----------------------------------------CS--SCCCEEEETTTTEEEEEETTTTEEE
T ss_pred CCcEEE--EEE----------------------------------------cC--CCceEEECCCCCEEEEEECCCCeEE
Confidence 665411 000 00 113588999999666555 689999
Q ss_pred EEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCC
Q psy9770 601 LWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAG 638 (811)
Q Consensus 601 iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg 638 (811)
+||..+++.+..+.....+.+++|+|||++|+++..++
T Consensus 298 ~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 298 VIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred EEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 99999999988888888899999999999888887764
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=5.6e-21 Score=203.71 Aligned_cols=295 Identities=13% Similarity=0.123 Sum_probs=213.5
Q ss_pred cEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccc-cEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCc
Q psy9770 312 LLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFER-SISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRG 390 (811)
Q Consensus 312 ~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~-~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~ 390 (811)
.+|++++.++ .|.+||+.+++.+..+.+. +.. .+..++|+| +|+++++. +..++.|.+||+.+++
T Consensus 2 ~~~v~~~~~~--------~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~--dg~~l~v~-~~~~~~v~~~d~~~~~-- 67 (337)
T 1pby_B 2 DYILAPARPD--------KLVVIDTEKMAVDKVITIA-DAGPTPMVPMVAP--GGRIAYAT-VNKSESLVKIDLVTGE-- 67 (337)
T ss_dssp EEEEEEETTT--------EEEEEETTTTEEEEEEECT-TCTTCCCCEEECT--TSSEEEEE-ETTTTEEEEEETTTCC--
T ss_pred cEEEEcCCCC--------eEEEEECCCCcEEEEEEcC-CCCCCccceEEcC--CCCEEEEE-eCCCCeEEEEECCCCC--
Confidence 5789999888 9999999999999887632 211 478899999 78766543 5678999999999988
Q ss_pred ceEEEeeeCC-----CcEEEEEecCCCCCeEEEE------------CCCcEEEEEEcCCceeeeecccccccCCCCceEE
Q psy9770 391 HKITETKCSV-----DTVVAAEFHPLDRNNIVTC------------GKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVT 453 (811)
Q Consensus 391 ~~~~~~~~~~-----~~V~~v~fsp~~~~ll~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~ 453 (811)
.+..+.... ..+..++|+|++..++++. .++.|.+||+.+++.+..... ...+.
T Consensus 68 -~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--------~~~~~ 138 (337)
T 1pby_B 68 -TLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--------PRQIT 138 (337)
T ss_dssp -EEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--------CSSCC
T ss_pred -eEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--------CCCcc
Confidence 666655321 2567899999888888876 569999999986655443321 13367
Q ss_pred EEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeeccc-ccceEEEEEecCCcEEEEecCCCcEE--EEeCCCCCcccee
Q psy9770 454 CLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVH-EGSVFSICVLKEGSIISAGGKDGRLL--QFDSNLQPTGYEA 529 (811)
Q Consensus 454 ~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h-~~~V~~l~~s~dg~~l~s~s~dg~I~--~wd~~~~~~~~~~ 529 (811)
+++|+|+|+ ++++ ++.|++||+.+++....+...+ ..+ +.|+|+|..|+..+..+... +|.......
T Consensus 139 ~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~---- 209 (337)
T 1pby_B 139 MLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDI---- 209 (337)
T ss_dssp CEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTS----
T ss_pred eeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeecccccc----
Confidence 789999998 5555 6899999999998887776222 133 37889988776555444332 221110000
Q ss_pred eeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCcee--eeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCC
Q psy9770 530 QIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSP--VVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH 607 (811)
Q Consensus 530 ~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~--~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~ 607 (811)
... .+. .....|.+||+.++... .+..+...+.+++|+|++++++++ ++.|.+||+.++
T Consensus 210 ----~~~-------~~~------~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~ 270 (337)
T 1pby_B 210 ----DPA-------DPT------AYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN 270 (337)
T ss_dssp ----CTT-------SGG------GEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT
T ss_pred ----ccc-------ccc------ccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC
Confidence 000 000 01125677777665432 233556678899999999999888 789999999999
Q ss_pred cEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCC
Q psy9770 608 SVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDG 657 (811)
Q Consensus 608 ~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~ 657 (811)
+.+..+.....+.+++|+|+|++|++++.++.|.+||+.+++.+..+..+
T Consensus 271 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 271 ASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred cCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 98888777778899999999999999999999999999999888777644
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=6.5e-21 Score=198.74 Aligned_cols=256 Identities=14% Similarity=0.021 Sum_probs=193.2
Q ss_pred EecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccC-Cceee-eeec-ccceEEEEEC
Q psy9770 508 AGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNL-GFSPV-VLGH-TDELWALAAH 584 (811)
Q Consensus 508 s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~-~~~~~-~~~h-~~~v~~l~~s 584 (811)
.++.|+.|++||+..+.. ..+..+...+.+++++|++..++.+.++.|++||+.+ +.... ...+ ...+.+++|+
T Consensus 17 ~~~~~~~i~~~d~~~~~~---~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKM---RVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp -CCCCEEEEEEETTTTEE---EEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CCCcceeEEEEeCCCCce---eeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 356789999999987765 3455678889999999999877777799999999988 64433 3344 3678899999
Q ss_pred CCCCeEEEEEC--CC--eEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEE-EEEeCCeEEEEecCC-cceeEEecCCC
Q psy9770 585 PSLSQFLTAGF--DR--IVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIII-VGCIAGRWLVMDSET-REAYSIHTDGN 658 (811)
Q Consensus 585 p~~~~l~s~s~--dg--~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la-~g~~dg~i~i~d~~~-~~~~~~~~~~~ 658 (811)
|++++|++++. ++ .|.+|+..+++. ..+.....+..++|+|+|++|+ ++..++.+.+|++.. ......+..+.
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 99999999993 34 445555555553 3344445689999999999887 677899899998532 23345566677
Q ss_pred CCeEEEEEccCCCEEEEEe-cCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCC-----------c
Q psy9770 659 EPIQVVKFSPDGKLLALGS-RDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGD-----------Y 726 (811)
Q Consensus 659 ~~i~~i~~spdg~~lasgs-~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~D-----------g 726 (811)
..+.+++|+|+|++|++++ .++.++||++..... .+..+..|...+..++|+|+|++|++++.+ +
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 249 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS---SVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDV 249 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---CEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCC---CcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCce
Confidence 8899999999999888776 589999999974322 334567788889999999999999988766 6
Q ss_pred eEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCC
Q psy9770 727 ELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFG 793 (811)
Q Consensus 727 ~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg 793 (811)
.|.+||+.+++...... ...|...+.+++|+|||++|++++.+.
T Consensus 250 ~l~~~d~~~~~~~~~~~-----------------------~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 250 RVQLMDMDGGNVETLFD-----------------------LFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEETTSCSCEEEEE-----------------------EEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEecCCCCceeeec-----------------------cCCCCcccccceECCCCCEEEEEEecc
Confidence 79999998875422110 012456789999999999988776553
No 149
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.1e-21 Score=232.55 Aligned_cols=356 Identities=12% Similarity=0.050 Sum_probs=238.1
Q ss_pred EEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCC---cEEEEEecCCCCCeEEEEC---------CCc
Q psy9770 356 CLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVD---TVVAAEFHPLDRNNIVTCG---------KSH 423 (811)
Q Consensus 356 ~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~---~V~~v~fsp~~~~ll~~~~---------d~~ 423 (811)
.++|+| +|+++++ +.|+.|++||+.+++ ....+..+.. .+..++|+|+++.+++++. ++.
T Consensus 20 ~~~~s~--dg~~~~~---~~d~~i~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 20 FPNWIS--GQEYLHQ---SADNNIVLYNIETGQ---SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CCEESS--SSEEEEE---CTTSCEEEEESSSCC---EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccEECC--CCeEEEE---cCCCCEEEEEcCCCc---EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceE
Confidence 779999 8887775 469999999999988 6555555443 4899999999988888766 589
Q ss_pred EEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccce---------
Q psy9770 424 INFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSV--------- 494 (811)
Q Consensus 424 i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V--------- 494 (811)
|++||+.+++.+... . ....+..++|+|||+.++...++.|++|++.+++.......++...|
T Consensus 92 i~~~d~~~g~~~~~~-~-------l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 92 YYIYDLSNGEFVRGN-E-------LPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVY 163 (719)
T ss_dssp EEEEETTTTEECCSS-C-------CCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHH
T ss_pred EEEEECCCCccccce-e-------cCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEccccccee
Confidence 999999865442100 0 01347789999999955444588999999998877654432333323
Q ss_pred --------EEEEEecCCcEEEEecCC-CcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccC
Q psy9770 495 --------FSICVLKEGSIISAGGKD-GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNL 565 (811)
Q Consensus 495 --------~~l~~s~dg~~l~s~s~d-g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~ 565 (811)
.+++|+|||+.|++++.| +.+.+|.+..... .+...+..+.+...+. ......|++||+.+
T Consensus 164 ~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~yp~~g~---~~~~~~l~~~d~~~ 233 (719)
T 1z68_A 164 EEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGD-------EQYPRTINIPYPKAGA---KNPVVRIFIIDTTY 233 (719)
T ss_dssp HHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCS-------SSSCEEEEEECCBTTS---CCCEEEEEEEESSC
T ss_pred eeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCC-------CCCccceeecCCCCCC---CCCeeEEEEEECCC
Confidence 489999999999988765 4445554321110 1112233333333221 11234788999987
Q ss_pred Cce----e-----eeeecccceEEEEECCCCCeEEEEECC----CeEEEEe----CCCCcEEEEe-----cCCCCeE---
Q psy9770 566 GFS----P-----VVLGHTDELWALAAHPSLSQFLTAGFD----RIVQLWD----SMSHSVVWSK-----DIAEQAQ--- 620 (811)
Q Consensus 566 ~~~----~-----~~~~h~~~v~~l~~sp~~~~l~s~s~d----g~v~iwd----~~~~~~~~~~-----~~~~~v~--- 620 (811)
+.. . .+.+|...+..++|+||++++++.... ..|.+|| +.++++.... .+...+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 313 (719)
T 1z68_A 234 PAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFF 313 (719)
T ss_dssp HHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSS
T ss_pred CCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEcccc
Confidence 643 1 123578889999999998777764432 2488899 7776654333 3444455
Q ss_pred --EEEEcCCCCEEEE--EEeCC--eEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecC-----CcEEEEEecC
Q psy9770 621 --SATFSPDGSIIIV--GCIAG--RWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRD-----NYIYVYEVSG 689 (811)
Q Consensus 621 --~~~~spdg~~la~--g~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~d-----g~I~iwd~~~ 689 (811)
.++|+|||+.|+. ...+| .|.+||+.+++ ...+..+...+..+.++ +++.|+..+.+ +.+++|.+..
T Consensus 314 ~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 314 VSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 7899999997665 33444 67778887766 45566566678888888 88888877765 7899999875
Q ss_pred CCc--ceeEEEE-ecCCCCCeeEEEeCCCCCeEEE-ecCC--ceEEEEECCCCccc
Q psy9770 690 DSR--KYSRVGR-CTGHSSFITHLDWSEDSMYIRS-NSGD--YELLYWNAGTCRQI 739 (811)
Q Consensus 690 ~~~--~~~~~~~-~~~h~~~V~~l~~spdg~~L~s-~s~D--g~i~iWd~~~~~~~ 739 (811)
... ..+++.. +.+|...+..+.|+||+++|+. ++.+ ..+.+||+.+++.+
T Consensus 392 ~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~ 447 (719)
T 1z68_A 392 GSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEI 447 (719)
T ss_dssp SSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEE
T ss_pred CCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEE
Confidence 221 1122111 2236677889999999988774 3333 46889999887643
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=8.4e-20 Score=196.01 Aligned_cols=272 Identities=10% Similarity=0.075 Sum_probs=185.9
Q ss_pred CCCcEEEEeCCC--CCccceeeeccccCCeEEEeeCCCCeEEEEeC---CCeEEEEEccCCceee---eeecccceEEEE
Q psy9770 511 KDGRLLQFDSNL--QPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTT---RNCILVGSLNLGFSPV---VLGHTDELWALA 582 (811)
Q Consensus 511 ~dg~I~~wd~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~---~~~i~~~d~~~~~~~~---~~~h~~~v~~l~ 582 (811)
.++.|.+|+++. +.. .......+......++++|++.+++++. ++.|++|++..+.... +..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~-~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTL-TNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEE-EEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeE-EEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 355677776653 333 2223334456677899999998777665 4799999997664333 344677889999
Q ss_pred ECCCCCeEEEEE-CCCeEEEEeCC-CCc--EEEEecCC----------CCeEEEEEcCCCCEEEEEEeCCeEEEEecC-C
Q psy9770 583 AHPSLSQFLTAG-FDRIVQLWDSM-SHS--VVWSKDIA----------EQAQSATFSPDGSIIIVGCIAGRWLVMDSE-T 647 (811)
Q Consensus 583 ~sp~~~~l~s~s-~dg~v~iwd~~-~~~--~~~~~~~~----------~~v~~~~~spdg~~la~g~~dg~i~i~d~~-~ 647 (811)
|+|++++|++++ .++.|.+|++. ++. .+...... ..+.+++|+|||+++++...++.|.+||+. +
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 999999888888 68999999996 333 23333221 248899999999966665668899999998 5
Q ss_pred cceeE--EecC-CCCCeEEEEEccCCCEEEEE-ecCCcEEEEEecCCCcceeEEEEecCCC------CCeeEEEeCCCCC
Q psy9770 648 REAYS--IHTD-GNEPIQVVKFSPDGKLLALG-SRDNYIYVYEVSGDSRKYSRVGRCTGHS------SFITHLDWSEDSM 717 (811)
Q Consensus 648 ~~~~~--~~~~-~~~~i~~i~~spdg~~lasg-s~dg~I~iwd~~~~~~~~~~~~~~~~h~------~~V~~l~~spdg~ 717 (811)
++... .+.. .......++|+|||++|+++ ..++.|++|++.........+..+.... ..+..++|+|||+
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 54332 2222 23367889999999976664 5678999999986333334444443332 3588999999999
Q ss_pred eE-EEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcC-CCcE
Q psy9770 718 YI-RSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDD-FGKL 795 (811)
Q Consensus 718 ~L-~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~-dg~v 795 (811)
+| ++...++.|.+|++.....+.... . ...++..+..++|+|||++|++++. ++.|
T Consensus 253 ~l~v~~~~~~~v~v~~~~~~g~~~~~~--------------------~--~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 310 (347)
T 3hfq_A 253 FLYVSNRGYNTLAVFAVTADGHLTLIQ--------------------Q--ISTEGDFPRDFDLDPTEAFVVVVNQNTDNA 310 (347)
T ss_dssp EEEEEEETTTEEEEEEECGGGCEEEEE--------------------E--EECSSSCCCEEEECTTSSEEEEEETTTTEE
T ss_pred EEEEEeCCCCEEEEEEECCCCcEEEeE--------------------E--EecCCCCcCeEEECCCCCEEEEEEcCCCcE
Confidence 87 455668999999987321111000 0 0112445789999999998887765 4899
Q ss_pred EEEeC--CCCCC
Q psy9770 796 KLYSY--PAVQP 805 (811)
Q Consensus 796 ~vw~~--~~~~~ 805 (811)
.+|++ .+++.
T Consensus 311 ~v~~~d~~tg~l 322 (347)
T 3hfq_A 311 TLYARDLTSGKL 322 (347)
T ss_dssp EEEEECTTTCCE
T ss_pred EEEEEeCCCCeE
Confidence 99955 45543
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=4.1e-19 Score=191.77 Aligned_cols=269 Identities=10% Similarity=0.093 Sum_probs=189.3
Q ss_pred CCCcEEEEec--CCceEEEEeecccccceEEEEEecCCcEEEEecCC----CcEEEEeCCC--CCccceeeeccccCCeE
Q psy9770 468 SNGNIIVWTR--GSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKD----GRLLQFDSNL--QPTGYEAQIAEHLGGIR 539 (811)
Q Consensus 468 ~dg~I~vwd~--~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~d----g~I~~wd~~~--~~~~~~~~~~~~~~~v~ 539 (811)
.++.|++|.+ .+++...... .+...+..++|+|+|++|++++.+ +.|.+|+++. +..........+.....
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~-~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~ 103 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSD-AEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC 103 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEE-EECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE
T ss_pred CCCCEEEEEEeCCCCCEEEeec-ccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE
Confidence 4567888865 5566555444 267778889999999999888875 7999998865 33322333333445667
Q ss_pred EEeeCCCCeEEEEe-CCCeEEEEEccCC-ceee---eeec-----------ccceEEEEECCCCCeEEEEE-CCCeEEEE
Q psy9770 540 TVSEGRGSQLIVGT-TRNCILVGSLNLG-FSPV---VLGH-----------TDELWALAAHPSLSQFLTAG-FDRIVQLW 602 (811)
Q Consensus 540 ~l~~~~~~~l~~~~-~~~~i~~~d~~~~-~~~~---~~~h-----------~~~v~~l~~sp~~~~l~s~s-~dg~v~iw 602 (811)
.+++ .+..++++. .++.+.+|++... .... ...+ ...+.+++|+|+++++++++ .++.|.+|
T Consensus 104 ~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~ 182 (361)
T 3scy_A 104 YLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKF 182 (361)
T ss_dssp EEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEE
Confidence 7777 566666665 5779999998743 1111 1111 22458899999999776665 47899999
Q ss_pred eCCCCc-------E-------EEEecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecCCcce--eEEe---cCCCCCeE
Q psy9770 603 DSMSHS-------V-------VWSKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSETREA--YSIH---TDGNEPIQ 662 (811)
Q Consensus 603 d~~~~~-------~-------~~~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~~~~~--~~~~---~~~~~~i~ 662 (811)
++.... + .........+..++|+|||++|+++. .++.|.+||+.+++. +..+ ..+.....
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~ 262 (361)
T 3scy_A 183 NINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSG 262 (361)
T ss_dssp EECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEE
T ss_pred EEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcc
Confidence 877533 1 22234456788999999999888877 589999999987654 2222 23345578
Q ss_pred EEEEccCCCEEEEEecC--CcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEec-CCceEEEEEC--CCCc
Q psy9770 663 VVKFSPDGKLLALGSRD--NYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNS-GDYELLYWNA--GTCR 737 (811)
Q Consensus 663 ~i~~spdg~~lasgs~d--g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s-~Dg~i~iWd~--~~~~ 737 (811)
.++|+|||++|+++..+ +.|.+|++.........+..+.. ...+.+++|+|||++|++++ .++.|.+|++ .+++
T Consensus 263 ~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 263 DIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGL 341 (361)
T ss_dssp EEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCC
T ss_pred cEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCc
Confidence 99999999999777654 88999999743333445555554 56788999999999888877 6789999655 4665
Q ss_pred cc
Q psy9770 738 QI 739 (811)
Q Consensus 738 ~~ 739 (811)
..
T Consensus 342 ~~ 343 (361)
T 3scy_A 342 LT 343 (361)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=1.1e-20 Score=224.05 Aligned_cols=322 Identities=11% Similarity=-0.019 Sum_probs=227.5
Q ss_pred EEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeeccccc---ceEEEEEecCCcEEEEecC---------CCcEEEEeC
Q psy9770 453 TCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEG---SVFSICVLKEGSIISAGGK---------DGRLLQFDS 520 (811)
Q Consensus 453 ~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~---~V~~l~~s~dg~~l~s~s~---------dg~I~~wd~ 520 (811)
..++|+|+|+++..+.||.|++||+.+++....+. .|.. .+.+++|+|||++|+.++. ++.|++||+
T Consensus 19 ~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQSADNNIVLYNIETGQSYTILS-NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEECTTSCEEEEESSSCCEEEEEC-HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEc-cccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 37899999998877789999999999998877765 4443 4899999999999998876 789999999
Q ss_pred CCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeee--ecccce-----------------EEE
Q psy9770 521 NLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL--GHTDEL-----------------WAL 581 (811)
Q Consensus 521 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~--~h~~~v-----------------~~l 581 (811)
.+++......+ ...+..++++|++..++...++.|++|++.++....+. ++...| .++
T Consensus 98 ~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 98 SNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTTEECCSSCC---CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCCccccceec---CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 87654111222 24578899999998777777899999999876443322 332222 489
Q ss_pred EECCCCCeEEEEECCC----------------------------------eEEEEeCCCCcEE---EE------ecCCCC
Q psy9770 582 AAHPSLSQFLTAGFDR----------------------------------IVQLWDSMSHSVV---WS------KDIAEQ 618 (811)
Q Consensus 582 ~~sp~~~~l~s~s~dg----------------------------------~v~iwd~~~~~~~---~~------~~~~~~ 618 (811)
+|+|||++|++++.|. .|++||+.+++.. .. ..+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 9999999999988652 7899999988752 11 125567
Q ss_pred eEEEEEcCCCCEEEEEEeCC----eEEEEe----cCCcceeEEe----cCCCCCeE-----EEEEccCCCEEEE--EecC
Q psy9770 619 AQSATFSPDGSIIIVGCIAG----RWLVMD----SETREAYSIH----TDGNEPIQ-----VVKFSPDGKLLAL--GSRD 679 (811)
Q Consensus 619 v~~~~~spdg~~la~g~~dg----~i~i~d----~~~~~~~~~~----~~~~~~i~-----~i~~spdg~~las--gs~d 679 (811)
+..++|+||++++++....+ .|.+|| +.+++....+ ..+...+. .++|+|||+.|+. ...+
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 334 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD 334 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC
Confidence 89999999988777654432 488999 8887766555 35666666 7899999996654 4455
Q ss_pred Cc--EEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCC-----ceEEEEECCC--Ccc-cCCCCCcccee
Q psy9770 680 NY--IYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGD-----YELLYWNAGT--CRQ-IPQSSQLRDVV 749 (811)
Q Consensus 680 g~--I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~D-----g~i~iWd~~~--~~~-~~~~~~~~~~~ 749 (811)
|. |++|++.++. ...+..+...+..+.++ +++.|+..+.+ +.+.+|.+.. +.. ...+..
T Consensus 335 g~~~l~~~~~~~~~-----~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~----- 403 (719)
T 1z68_A 335 GYKHIHYIKDTVEN-----AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTC----- 403 (719)
T ss_dssp SCEEEEEESSCSTT-----CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESST-----
T ss_pred CceEEEEEECCCCc-----eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccC-----
Confidence 64 5555655542 23455666678888777 88777766554 7888998754 311 110000
Q ss_pred EeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEE-EcCC--CcEEEEeCCCCCC
Q psy9770 750 WESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIAT-GDDF--GKLKLYSYPAVQP 805 (811)
Q Consensus 750 ~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las-~~~d--g~v~vw~~~~~~~ 805 (811)
....+...+..+.|+||+++|+. ++.+ ..+.+|++.+++.
T Consensus 404 ----------------~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 404 ----------------HLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQE 446 (719)
T ss_dssp ----------------TTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCE
T ss_pred ----------------ccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCE
Confidence 00113456778999999987774 4333 4688999887764
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=5e-20 Score=197.48 Aligned_cols=301 Identities=9% Similarity=0.032 Sum_probs=203.8
Q ss_pred EEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEE
Q psy9770 304 CLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWD 383 (811)
Q Consensus 304 ~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd 383 (811)
.+++++++.++++++.++ .|.+||+.+++.+..+... ....+..++|+| +|+++++. +..++.|.+||
T Consensus 4 g~~~~~~~~~~v~~~~~~--------~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~--dg~~~~v~-~~~~~~i~~~d 71 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPN--------NLHVVDVASDTVYKSCVMP-DKFGPGTAMMAP--DNRTAYVL-NNHYGDIYGID 71 (349)
T ss_dssp CCCCCTTCEEEEEEETTT--------EEEEEETTTTEEEEEEECS-SCCSSCEEEECT--TSSEEEEE-ETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCC--------eEEEEECCCCcEEEEEecC-CCCCCceeEECC--CCCEEEEE-eCCCCcEEEEe
Confidence 467899999999999988 9999999999999888632 122578999999 78866543 56789999999
Q ss_pred cccCCCcceEEEeeeCC------CcEEEEEecCCCCCeEEEECC------------CcEEEEEEcCCceeeeeccccccc
Q psy9770 384 WQKSDRGHKITETKCSV------DTVVAAEFHPLDRNNIVTCGK------------SHINFWTIDAGGTLYKKQGIFEMI 445 (811)
Q Consensus 384 ~~~~~~~~~~~~~~~~~------~~V~~v~fsp~~~~ll~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~l 445 (811)
+.+++ .+..+..+. ..+..++|+|+++.++++..+ +.|.+||+.++....... .
T Consensus 72 ~~t~~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~---- 143 (349)
T 1jmx_B 72 LDTCK---NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR-T---- 143 (349)
T ss_dssp TTTTE---EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE-E----
T ss_pred CCCCc---EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceee-e----
Confidence 99887 666665432 237889999998888888755 899999998643222111 1
Q ss_pred CCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCc
Q psy9770 446 RDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPT 525 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~ 525 (811)
..++..+.+++|+|+|++++++ +.|++||..+++....+...+..... .+.++ .+.+|.......
T Consensus 144 ~~~~~~~~~~~~s~dg~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~-----------~~~~~~~~~~~~ 208 (349)
T 1jmx_B 144 FPMPRQVYLMRAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNWNRKG--YSAPD-----------VLYFWPHQSPRH 208 (349)
T ss_dssp EECCSSCCCEEECTTSCEEEES--SSEEEECTTTCCEEEEECSTTCCCTT--BCCCB-----------CCCCCCCCCTTC
T ss_pred ccCCCcccceeECCCCcEEEcc--CcEEEEeCCCCceeccccccccCCcc--ccCcc-----------ceeeecCCCcce
Confidence 1122357889999999966654 44999999998887766522110000 00000 111222111100
Q ss_pred cceeeeccccCCeEEEeeCCCC------------eEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECC-CCCeEEE
Q psy9770 526 GYEAQIAEHLGGIRTVSEGRGS------------QLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHP-SLSQFLT 592 (811)
Q Consensus 526 ~~~~~~~~~~~~v~~l~~~~~~------------~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp-~~~~l~s 592 (811)
... ....+++.+++ .+......+.+.++++ ..+...+.+++++| +++++++
T Consensus 209 --~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~sp~dg~~l~~ 272 (349)
T 1jmx_B 209 --EFS------MLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEF--------ADLTELYFTGLRSPKDPNQIYG 272 (349)
T ss_dssp --EEE------EEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEE--------EECSSCEEEEEECSSCTTEEEE
T ss_pred --eEE------eeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccc--------ccCCCcceeeEecCCCCCEEEE
Confidence 000 00111111111 1112222334444443 22455788999999 9999888
Q ss_pred EECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCC
Q psy9770 593 AGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDG 657 (811)
Q Consensus 593 ~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~ 657 (811)
+ ++.|.+||+.+++.+..+.....+.+++|+|+|++|++++.++.|.+||+.+++.+..+...
T Consensus 273 ~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 273 V--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp E--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred E--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 8 88999999999998888777777889999999999999888999999999999888777644
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=1.7e-20 Score=216.60 Aligned_cols=268 Identities=8% Similarity=0.008 Sum_probs=198.0
Q ss_pred ccccceEEEEEecCCcEEEEecC-CCcEEEEeCCCCCccceeeecccc-CCeEEEeeCCCCeEEE-EeC---CCeEEE--
Q psy9770 489 VHEGSVFSICVLKEGSIISAGGK-DGRLLQFDSNLQPTGYEAQIAEHL-GGIRTVSEGRGSQLIV-GTT---RNCILV-- 560 (811)
Q Consensus 489 ~h~~~V~~l~~s~dg~~l~s~s~-dg~I~~wd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~l~~-~~~---~~~i~~-- 560 (811)
.+..+|.+++|+|||+.|+.++. ||++.+|+++.+.. ..+..+. ..+..++++|+ .++. +.. +....+
T Consensus 19 ~~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~---~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 19 LIAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET---VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HHHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE---EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred HhccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc---EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 34668999999999999998877 99999999855443 4444444 57889999999 5554 433 243444
Q ss_pred EEc--cCCceeeeeecccceEEEEECCCCCe-EEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeC
Q psy9770 561 GSL--NLGFSPVVLGHTDELWALAAHPSLSQ-FLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIA 637 (811)
Q Consensus 561 ~d~--~~~~~~~~~~h~~~v~~l~~sp~~~~-l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~d 637 (811)
++. ..... .+.. ...+...+|+|+++. +++.+.++.+.+||+.+++......... .+++|+|||++|+.++.+
T Consensus 95 ~~~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp EETTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEE
T ss_pred EeccCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEc
Confidence 555 33333 2222 223345678888763 3333444455699999887665554444 889999999999988877
Q ss_pred ----CeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCC--cEEEEEecCCCcceeEEEEecCCCCCeeEEE
Q psy9770 638 ----GRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDN--YIYVYEVSGDSRKYSRVGRCTGHSSFITHLD 711 (811)
Q Consensus 638 ----g~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg--~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~ 711 (811)
+.|++||+.+++.. .+..+...+..++|||||++|+++..++ .|++||+.++. .. .+.+|...+..++
T Consensus 171 ~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~----~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS----VE-DLELPSKDFSSYR 244 (582)
T ss_dssp ETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC----EE-ECCCSCSHHHHHC
T ss_pred CCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc----EE-EccCCCcChhhhh
Confidence 78999999988765 5677888899999999999999888888 89999998763 22 5677877777777
Q ss_pred --------eCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCC
Q psy9770 712 --------WSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDA 783 (811)
Q Consensus 712 --------~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg 783 (811)
|+|||.++++++.|+.+++|++ |+.+... ...|.+++|+ |+
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~~----------------------------~~~v~~~~~s-dg 293 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEAP----------------------------QGNHGRVVLW-RG 293 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECCC----------------------------SSEEEEEEEE-TT
T ss_pred hccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeeccC----------------------------CCceEEEEec-CC
Confidence 9999999999999999999999 6544311 2457899999 99
Q ss_pred CEEEEEcCCCc---EEEEeCC
Q psy9770 784 RVIATGDDFGK---LKLYSYP 801 (811)
Q Consensus 784 ~~Las~~~dg~---v~vw~~~ 801 (811)
+++++++.+.+ |.+|+..
T Consensus 294 ~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 294 KLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTC
T ss_pred EEEEEEcCCCCCCeEEEEcCC
Confidence 99998877643 6666654
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=2.8e-19 Score=191.87 Aligned_cols=269 Identities=11% Similarity=0.096 Sum_probs=188.1
Q ss_pred CCcEEEEe--cCCceEEEEeecccccceEEEEEecCCcEEEEecC---CCcEEEEeCCCCCccceeeeccccCCeEEEee
Q psy9770 469 NGNIIVWT--RGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK---DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSE 543 (811)
Q Consensus 469 dg~I~vwd--~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~---dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~ 543 (811)
++.|.+|+ ..+++........+...+..++|+|+|+ |++++. ++.|.+|++..+.......+..+...+..+++
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 45566665 4556655432225667788999999999 554443 68999999976654333444556677888999
Q ss_pred CCCCe-EEEEe-CCCeEEEEEccC-Cceeeee--ec----------ccceEEEEECCCCCeEEEEECCCeEEEEeCC-CC
Q psy9770 544 GRGSQ-LIVGT-TRNCILVGSLNL-GFSPVVL--GH----------TDELWALAAHPSLSQFLTAGFDRIVQLWDSM-SH 607 (811)
Q Consensus 544 ~~~~~-l~~~~-~~~~i~~~d~~~-~~~~~~~--~h----------~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~-~~ 607 (811)
++++. ++++. .++.+.+|++.. +....+. .+ ...+.+++|+|+++++++...++.|.+|++. ++
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC
Confidence 99876 55555 578999999863 2222221 11 1248899999999966666678899999998 55
Q ss_pred cEEEE----ecCCCCeEEEEEcCCCCEEEEE-EeCCeEEEEecCC--cce--eEEecCCC------CCeEEEEEccCCCE
Q psy9770 608 SVVWS----KDIAEQAQSATFSPDGSIIIVG-CIAGRWLVMDSET--REA--YSIHTDGN------EPIQVVKFSPDGKL 672 (811)
Q Consensus 608 ~~~~~----~~~~~~v~~~~~spdg~~la~g-~~dg~i~i~d~~~--~~~--~~~~~~~~------~~i~~i~~spdg~~ 672 (811)
+.... ......+..++|+|||++|+++ ..++.|.+|++.. ++. +..+.... ..+..++|+|||++
T Consensus 174 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 174 QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 44322 2233468899999999977664 5678999999874 442 22222221 35888999999998
Q ss_pred EEE-EecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecC-CceEEEEE--CCCCccc
Q psy9770 673 LAL-GSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSG-DYELLYWN--AGTCRQI 739 (811)
Q Consensus 673 las-gs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~-Dg~i~iWd--~~~~~~~ 739 (811)
|++ ...++.|.+|++...+ ....+..+..+...+..++|+|||++|++++. ++.|.+|+ ..+|+..
T Consensus 254 l~v~~~~~~~v~v~~~~~~g-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 254 LYVSNRGYNTLAVFAVTADG-HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEEETTTEEEEEEECGGG-CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEEeCCCCEEEEEEECCCC-cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 854 4568999999997432 34566667777777899999999998888765 48999995 4566543
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=1.9e-20 Score=216.12 Aligned_cols=268 Identities=14% Similarity=0.077 Sum_probs=202.5
Q ss_pred ceEEEEEEcCCCc-EEEEcC-CCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecC---CCcEEEEeCCC--
Q psy9770 450 KYVTCLAFTQGGE-VLSGDS-NGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK---DGRLLQFDSNL-- 522 (811)
Q Consensus 450 ~~v~~l~~s~~g~-llsg~~-dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~---dg~I~~wd~~~-- 522 (811)
.+|.+++|+|||+ ++.++. ||++.||++.+++...... .+...+..++|+|| +++++++. +....+|.++.
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~-~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNR-EPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCS-SCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeec-ccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 4699999999998 555554 9999999997776655443 34468999999999 78877664 45556655433
Q ss_pred CCccceeeeccccCCeEEEeeCC--CCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECC----
Q psy9770 523 QPTGYEAQIAEHLGGIRTVSEGR--GSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFD---- 596 (811)
Q Consensus 523 ~~~~~~~~~~~~~~~v~~l~~~~--~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d---- 596 (811)
... ...+... ..+...++++ ++.+++....+.+.+||+.++....+..+.. .+++|+|||++|++++.+
T Consensus 100 ~g~--~~~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 100 PGE--EQRLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp TTC--CEECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTE
T ss_pred CCc--cccccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCC
Confidence 221 1122211 1222334444 4466777777777799999886666655555 789999999999988877
Q ss_pred CeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCC--eEEEEecCCcceeEEecCCCCCeEEEE--------E
Q psy9770 597 RIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAG--RWLVMDSETREAYSIHTDGNEPIQVVK--------F 666 (811)
Q Consensus 597 g~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~i~--------~ 666 (811)
+.|++||+.+++......+...+..++|+|||+.|+++..+| .|++||+.+++.. .+..+...+..++ |
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGY 253 (582)
T ss_dssp EEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEE
T ss_pred eEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeE
Confidence 789999999988776667778899999999999999888888 8999999998887 7777777777777 9
Q ss_pred ccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCc---eEEEEECCC
Q psy9770 667 SPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDY---ELLYWNAGT 735 (811)
Q Consensus 667 spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg---~i~iWd~~~ 735 (811)
+|||.++++++.++.++||++ + +... .+.+.|.+++|+ |++++++++.+. .|.+||..+
T Consensus 254 spdg~~~~~~~~~g~~~l~~~--g----~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 254 LPDGRLAVVARREGRSAVFID--G----ERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp CTTSCEEEEEEETTEEEEEET--T----EEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred cCCCcEEEEEEcCCcEEEEEE--C----Ceec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 999999999999999999999 3 2221 345678999999 999999887774 467777654
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=4.6e-20 Score=197.72 Aligned_cols=286 Identities=12% Similarity=0.053 Sum_probs=192.1
Q ss_pred EEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEE-EEecCCCcEEEEeCCCCCccceeee
Q psy9770 454 CLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSII-SAGGKDGRLLQFDSNLQPTGYEAQI 531 (811)
Q Consensus 454 ~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l-~s~s~dg~I~~wd~~~~~~~~~~~~ 531 (811)
.+++.+++. +++++.++.|++||..+++....+.......+..++|+|+|+.+ ++...++.|.+||+.+++......+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 345677777 55888999999999999998888762222367899999999855 4556789999999876654111110
Q ss_pred ccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECC------------CeE
Q psy9770 532 AEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFD------------RIV 599 (811)
Q Consensus 532 ~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d------------g~v 599 (811)
... + ..+...+.+++|+|++++|++++.+ +.|
T Consensus 84 ~~~----------~--------------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i 127 (349)
T 1jmx_B 84 SSV----------P--------------------------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRL 127 (349)
T ss_dssp CCS----------T--------------------------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEE
T ss_pred ccc----------c--------------------------ccccccccceEECCCCCEEEEEcccccccccccccCCCeE
Confidence 000 0 0001235678999999999988865 899
Q ss_pred EEEeCCCCc---EEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCC-----------------
Q psy9770 600 QLWDSMSHS---VVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNE----------------- 659 (811)
Q Consensus 600 ~iwd~~~~~---~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~----------------- 659 (811)
.+||+.+++ .+........+.+++|+|+|+ ++++ ++.|.+||+.+++.+..+..+..
T Consensus 128 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (349)
T 1jmx_B 128 EVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA--GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQ 204 (349)
T ss_dssp EEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE--SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCC
T ss_pred EEEECCCccccceeeeccCCCcccceeECCCCc-EEEc--cCcEEEEeCCCCceeccccccccCCccccCccceeeecCC
Confidence 999998844 334445556788999999999 6554 44599999999988777654320
Q ss_pred -------CeEEEEEccCCCEEEEEecCCc-EEEEEecCCCcceeEEEEecCCCCCeeEEEeCC-CCCeEEEecCCceEEE
Q psy9770 660 -------PIQVVKFSPDGKLLALGSRDNY-IYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSE-DSMYIRSNSGDYELLY 730 (811)
Q Consensus 660 -------~i~~i~~spdg~~lasgs~dg~-I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~L~s~s~Dg~i~i 730 (811)
....+++++|+........... +..++..++.. . ...+..+...+..++|+| |+++|+++ ++.|.+
T Consensus 205 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~ 279 (349)
T 1jmx_B 205 SPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKT--H-TQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAK 279 (349)
T ss_dssp CTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCE--E-EEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEE
T ss_pred CcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcE--E-ecccccCCCcceeeEecCCCCCEEEEE--cCeEEE
Confidence 2345667665532111100111 11234433321 1 111223556788999999 99999988 889999
Q ss_pred EECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCCCCCcc
Q psy9770 731 WNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQPKLCL 809 (811)
Q Consensus 731 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~~~~~ 809 (811)
||+.+++.+..+. ....+.+++|+|||++|++++.++.|++||+.+++.+..+
T Consensus 280 ~d~~~~~~~~~~~--------------------------~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 280 YDLKQRKLIKAAN--------------------------LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp EETTTTEEEEEEE--------------------------CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred EECccCeEEEEEc--------------------------CCCCccceEECCCCCEEEEecCCCeEEEEeccccceeeee
Confidence 9999887654321 1234778999999999888888999999999988765544
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=1.3e-18 Score=206.46 Aligned_cols=368 Identities=12% Similarity=0.006 Sum_probs=244.3
Q ss_pred ccceEEccCCcEEEEeccEEEEEeCCCCceE-EeccCCCC-----eEEEEEcCCCcEEEEeeccCCCC-CCCCCeEEEEe
Q psy9770 263 RSNLYLLPTGEIVYFVAAVAVLYNVEEQTQR-HYLGHTDD-----IKCLSIHPNKLLIATGQVAGHDA-REGKPHIRIWN 335 (811)
Q Consensus 263 ~~~l~~spdg~~l~~~~~~i~i~d~~~~~~~-~~~~h~~~-----V~~la~spdg~~Lasg~~dg~~~-~~~~~~I~iWd 335 (811)
..++.|+|||++++..++.|.+||+.+++.. .+.+|... ...++|||||++||+++.+..-. ......+.|||
T Consensus 19 ~~~~~w~~dg~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp CCCEEECSSSEEEEEETTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccccEECCCCcEEEEcCCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence 4589999999999998899999999988754 45666532 23478999999999998753000 00112778999
Q ss_pred CCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEE-eeeCCCcE-----------
Q psy9770 336 SVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITE-TKCSVDTV----------- 403 (811)
Q Consensus 336 ~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~-~~~~~~~V----------- 403 (811)
+.+++... +..|...+..++||| ||+.||.+ .++.|++|++.+++ .... ..++...+
T Consensus 99 ~~~~~~~~---l~~~~~~~~~~~~SP--dG~~la~~---~~~~i~~~~~~~~~---~~~lt~~g~~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 99 LNKRQLIT---EERIPNNTQWVTWSP--VGHKLAYV---WNNDIYVKIEPNLP---SYRITWTGKEDIIYNGITDWVYEE 167 (740)
T ss_dssp TTTTEECC---SSCCCTTEEEEEECS--STTCEEEE---ETTEEEEESSTTSC---CEECCSCCBTTTEEESBCCHHHHH
T ss_pred CCCCcEEE---cccCCCcceeeEECC--CCCEEEEE---ECCeEEEEECCCCc---eEEEcCCCCccceecCcccccccc
Confidence 99998654 337788999999999 99999984 57899999998876 3321 22332223
Q ss_pred ------EEEEecCCCCCeEEEECC-CcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEe
Q psy9770 404 ------VAAEFHPLDRNNIVTCGK-SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWT 476 (811)
Q Consensus 404 ------~~v~fsp~~~~ll~~~~d-~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd 476 (811)
..+.|+||++.++....| ..+.+|++...... ..+...+..+.|...|.- .....|++||
T Consensus 168 e~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~----------~~~~~~~~~~~yp~~G~~---~~~~~l~v~d 234 (740)
T 4a5s_A 168 EVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE----------SLQYPKTVRVPYPKAGAV---NPTVKFFVVN 234 (740)
T ss_dssp HTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST----------TCSSCEEEEEECCBTTSC---CCEEEEEEEE
T ss_pred hhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCC----------CCCCCcceeecCCCCcCc---CCeeEEEEEE
Confidence 348999999988888765 55888887522110 012344677777777642 2223789999
Q ss_pred cCC---c---eEEEEeec----ccccceEEEEEecCCcEEEEec----CCCcEEEEeCCCCC----ccceeee--ccccC
Q psy9770 477 RGS---N---TISKFIRN----VHEGSVFSICVLKEGSIISAGG----KDGRLLQFDSNLQP----TGYEAQI--AEHLG 536 (811)
Q Consensus 477 ~~~---~---~~~~~~~~----~h~~~V~~l~~s~dg~~l~s~s----~dg~I~~wd~~~~~----~~~~~~~--~~~~~ 536 (811)
+.+ + +....... .|...+..++|+|||++++... .+..|++||+.++. +.....+ ..+..
T Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~ 314 (740)
T 4a5s_A 235 TDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTG 314 (740)
T ss_dssp TTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSS
T ss_pred CCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCc
Confidence 998 7 33332211 2778899999999999666542 34479999998776 2112222 23333
Q ss_pred Ce-----EEEeeCCCCeE-E-EEe-CC--CeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECC-------CeE
Q psy9770 537 GI-----RTVSEGRGSQL-I-VGT-TR--NCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFD-------RIV 599 (811)
Q Consensus 537 ~v-----~~l~~~~~~~l-~-~~~-~~--~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d-------g~v 599 (811)
.+ ....|+|++.. + ..+ .+ ..|++|+..++....+......+..+.. ++++.|+..+.. ..|
T Consensus 315 ~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~l 393 (740)
T 4a5s_A 315 WVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNL 393 (740)
T ss_dssp CSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEE
T ss_pred eEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEE
Confidence 33 25678898763 3 333 33 4788999988766666655556665543 346655555443 345
Q ss_pred EEEeCCCCcEEEEec-----CCCCeEEEEEcCCCCEEEEEEeC---CeEEEEecCCcceeEEec
Q psy9770 600 QLWDSMSHSVVWSKD-----IAEQAQSATFSPDGSIIIVGCIA---GRWLVMDSETREAYSIHT 655 (811)
Q Consensus 600 ~iwd~~~~~~~~~~~-----~~~~v~~~~~spdg~~la~g~~d---g~i~i~d~~~~~~~~~~~ 655 (811)
...++..+.....+. .......+.|+|+|++++..... ..+.+++..+++.+..+.
T Consensus 394 y~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~l~ 457 (740)
T 4a5s_A 394 YKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLE 457 (740)
T ss_dssp EEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEEEec
Confidence 555665544332322 13578899999999988876554 378888988777655543
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=3.3e-19 Score=211.60 Aligned_cols=361 Identities=9% Similarity=0.052 Sum_probs=237.3
Q ss_pred ccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCc-----EEEEEecCCCCCeEEEECC---
Q psy9770 350 FERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDT-----VVAAEFHPLDRNNIVTCGK--- 421 (811)
Q Consensus 350 h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~-----V~~v~fsp~~~~ll~~~~d--- 421 (811)
+......++|+| ||++|++ + |+.|++||+.+++ +...+..|... ...+.|+||++.+++++.+
T Consensus 15 ~~~~~~~~~w~~--dg~~~~~--~--~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~ 85 (740)
T 4a5s_A 15 YRLKLYSLRWIS--DHEYLYK--Q--ENNILVFNAEYGN---SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQ 85 (740)
T ss_dssp SCCCCCCEEECS--SSEEEEE--E--TTEEEEEETTTCC---EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEEC
T ss_pred ccccccccEECC--CCcEEEE--c--CCcEEEEECCCCc---eEEEEechhhhhhcccccceEECCCCCEEEEEECCeee
Confidence 344566899999 8999987 3 8999999999998 66667766543 2347889999888888765
Q ss_pred ------CcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccce-
Q psy9770 422 ------SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSV- 494 (811)
Q Consensus 422 ------~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V- 494 (811)
+.+.+||+.+++ +... ..+...+...+|+|||+.++...++.|++|++.+++..+....++...+
T Consensus 86 ~r~~~~~~~~~~d~~~~~-~~~l-------~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~ 157 (740)
T 4a5s_A 86 WRHSYTASYDIYDLNKRQ-LITE-------ERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIY 157 (740)
T ss_dssp SSSCEEEEEEEEETTTTE-ECCS-------SCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEE
T ss_pred EEEccceEEEEEECCCCc-EEEc-------ccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCcccee
Confidence 567799998654 3222 3455679999999999955444689999999988876554332333323
Q ss_pred ----------------EEEEEecCCcEEEEecCCC-cEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCe
Q psy9770 495 ----------------FSICVLKEGSIISAGGKDG-RLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNC 557 (811)
Q Consensus 495 ----------------~~l~~s~dg~~l~s~s~dg-~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~ 557 (811)
..+.|+|||+.|+.++.|. .+.+|++....... .+...+..+.+...+.- .....
T Consensus 158 ~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~-----~~~~~~~~~~yp~~G~~---~~~~~ 229 (740)
T 4a5s_A 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES-----LQYPKTVRVPYPKAGAV---NPTVK 229 (740)
T ss_dssp ESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT-----CSSCEEEEEECCBTTSC---CCEEE
T ss_pred cCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC-----CCCCcceeecCCCCcCc---CCeeE
Confidence 3589999999998877654 48888763221100 12333444544443321 11226
Q ss_pred EEEEEccC---C---ceeeee------ecccceEEEEECCCCCeEEEEEC----CCeEEEEeCCCCc----EE-----EE
Q psy9770 558 ILVGSLNL---G---FSPVVL------GHTDELWALAAHPSLSQFLTAGF----DRIVQLWDSMSHS----VV-----WS 612 (811)
Q Consensus 558 i~~~d~~~---~---~~~~~~------~h~~~v~~l~~sp~~~~l~s~s~----dg~v~iwd~~~~~----~~-----~~ 612 (811)
|++||+.+ + ....+. +|...+..++|+||++.++.... +..|.+||+.+++ +. ..
T Consensus 230 l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~ 309 (740)
T 4a5s_A 230 FFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE 309 (740)
T ss_dssp EEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEE
T ss_pred EEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeee
Confidence 88999988 6 333343 37778999999999997666543 3479999998876 21 11
Q ss_pred ecCCCCe-----EEEEEcCCCCEEE-EEEe-C--CeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecC----
Q psy9770 613 KDIAEQA-----QSATFSPDGSIII-VGCI-A--GRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRD---- 679 (811)
Q Consensus 613 ~~~~~~v-----~~~~~spdg~~la-~g~~-d--g~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~d---- 679 (811)
..+...+ ...+|+|||+.|+ ..+. + ..|++||+.+++... +......+..+. .+|++.|+..+..
T Consensus 310 ~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~-~~d~~~i~f~~~~~~~~ 387 (740)
T 4a5s_A 310 MSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIE-ALTSDYLYYISNEYKGM 387 (740)
T ss_dssp ECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEE-EECSSEEEEEESCGGGC
T ss_pred ccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEE-EEeCCEEEEEEecCCCC
Confidence 2233333 3788999999887 5553 3 368889988766554 444455566554 2557766655443
Q ss_pred -CcEEEEEecCCCcceeEEEEec----CCCCCeeEEEeCCCCCeEEEecCC---ceEEEEECCCCccc
Q psy9770 680 -NYIYVYEVSGDSRKYSRVGRCT----GHSSFITHLDWSEDSMYIRSNSGD---YELLYWNAGTCRQI 739 (811)
Q Consensus 680 -g~I~iwd~~~~~~~~~~~~~~~----~h~~~V~~l~~spdg~~L~s~s~D---g~i~iWd~~~~~~~ 739 (811)
+...||.+...+.. ....+. +....+..+.||||+++++..... ..+.+++..+++.+
T Consensus 388 ~~~~~ly~v~~~g~~--~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~ 453 (740)
T 4a5s_A 388 PGGRNLYKIQLIDYT--KVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGL 453 (740)
T ss_dssp TTCBEEEEEETTEEE--EEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEE
T ss_pred CceeEEEEEECCCCC--cceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEE
Confidence 44666666543211 111232 234568899999999987654433 36888888877644
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.83 E-value=4.1e-18 Score=183.90 Aligned_cols=313 Identities=14% Similarity=0.128 Sum_probs=204.1
Q ss_pred cCCCcEEEEeeccCCCCCCCCCeEEEEeC--CCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCC--CCceEEEEE
Q psy9770 308 HPNKLLIATGQVAGHDAREGKPHIRIWNS--VSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEG--NDYNISVWD 383 (811)
Q Consensus 308 spdg~~Lasg~~dg~~~~~~~~~I~iWd~--~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s--~d~~i~vWd 383 (811)
.+...++.+|+..+ +....|.+|++ .+++....... +...+..++|+| +|++|++.+.. .++.|.+|+
T Consensus 10 ~~~~~~~~vg~y~~----~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~sp--dg~~l~~~~~~~~~~~~v~~~~ 81 (361)
T 3scy_A 10 TDSELTMLVGTYTS----GNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSA--DGKFVYSVNEFSKDQAAVSAFA 81 (361)
T ss_dssp GGGEEEEEEEECCS----SSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECT--TSSEEEEEECCSSTTCEEEEEE
T ss_pred CCCceEEEEEeccC----CCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECC--CCCEEEEEEccCCCCCcEEEEE
Confidence 44455667776543 11237888865 56765544432 677888999999 89988875332 348999999
Q ss_pred cccC-CCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC-CCcEEEEEEcCCceeeeecccccc-------cCCCCceEEE
Q psy9770 384 WQKS-DRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG-KSHINFWTIDAGGTLYKKQGIFEM-------IRDKPKYVTC 454 (811)
Q Consensus 384 ~~~~-~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~-d~~i~iwd~~~~~~~~~~~~~~~~-------l~~~~~~v~~ 454 (811)
+... .....+.....+......+++ +++.++++.. ++.|.+|++...+.+......... ...+...+.+
T Consensus 82 ~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 159 (361)
T 3scy_A 82 FDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHC 159 (361)
T ss_dssp EETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEE
T ss_pred EeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceE
Confidence 9864 211134444445667788888 5777777764 789999999865444322111100 0112334688
Q ss_pred EEEcCCCc-EE-EEcCCCcEEEEecCCce-------EE-----EEeecccccceEEEEEecCCcEEEEec-CCCcEEEEe
Q psy9770 455 LAFTQGGE-VL-SGDSNGNIIVWTRGSNT-------IS-----KFIRNVHEGSVFSICVLKEGSIISAGG-KDGRLLQFD 519 (811)
Q Consensus 455 l~~s~~g~-ll-sg~~dg~I~vwd~~~~~-------~~-----~~~~~~h~~~V~~l~~s~dg~~l~s~s-~dg~I~~wd 519 (811)
++|+|+|+ ++ +...++.|.+|++.... .. ......+...+..++|+|||++|++++ .++.|.+|+
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 239 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFR 239 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEE
Confidence 99999998 44 55568899999876433 11 122224556788999999999776666 689999999
Q ss_pred CCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECC--C
Q psy9770 520 SNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFD--R 597 (811)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d--g 597 (811)
+..+....... +. ....+.....+++|+|++++|+++..+ +
T Consensus 240 ~~~g~~~~~~~----------~~---------------------------~~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 240 YADGMLDEIQT----------VA---------------------------ADTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp EETTEEEEEEE----------EE---------------------------SCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred ecCCceEEeEE----------Ee---------------------------cCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 87443211000 00 011223345789999999988776654 8
Q ss_pred eEEEEeCC--CCc--EEEEecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEE--ecCCcceeEEec-CCCCCeEEEEEc
Q psy9770 598 IVQLWDSM--SHS--VVWSKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVM--DSETREAYSIHT-DGNEPIQVVKFS 667 (811)
Q Consensus 598 ~v~iwd~~--~~~--~~~~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~--d~~~~~~~~~~~-~~~~~i~~i~~s 667 (811)
.|.+|++. +++ .+........+..++|+|||++|+++. .++.|.+| |..++++..... .+...+.|++|.
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 99999985 444 333344456788999999999999888 57899995 555676654432 234568888885
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=3.2e-19 Score=194.57 Aligned_cols=272 Identities=17% Similarity=0.152 Sum_probs=190.5
Q ss_pred EEEcCCCc-EEEEcC-CC--cEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceee
Q psy9770 455 LAFTQGGE-VLSGDS-NG--NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ 530 (811)
Q Consensus 455 l~~s~~g~-llsg~~-dg--~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~ 530 (811)
.+|+|||+ ++.++. +| .|.+||+.+++...... .+...+..+.|+|||+.|+.++.++.|++||+.+++......
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~-~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE-GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC-SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee-CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 78999999 555544 66 48889999888877665 666666677899999999999999999999998876522222
Q ss_pred eccccCCeEE--EeeCCCCeEEEEe-----------------------CCCeEEEEEccCCceeeeeecccceEEEEECC
Q psy9770 531 IAEHLGGIRT--VSEGRGSQLIVGT-----------------------TRNCILVGSLNLGFSPVVLGHTDELWALAAHP 585 (811)
Q Consensus 531 ~~~~~~~v~~--l~~~~~~~l~~~~-----------------------~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp 585 (811)
. +...+.. ...++++.++++. ....|++||+.++....+..+...+..++|+|
T Consensus 120 ~--~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 120 V--PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRP 197 (388)
T ss_dssp C--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEET
T ss_pred c--hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECC
Confidence 2 2222322 2347777766532 34689999999988777878888899999999
Q ss_pred -CCCeEEEEECC------CeEEEEeCCCCcEEEEecCC--CCeEEEEEcCCCCEEEEEEe-CC----eEEEEecCCccee
Q psy9770 586 -SLSQFLTAGFD------RIVQLWDSMSHSVVWSKDIA--EQAQSATFSPDGSIIIVGCI-AG----RWLVMDSETREAY 651 (811)
Q Consensus 586 -~~~~l~s~s~d------g~v~iwd~~~~~~~~~~~~~--~~v~~~~~spdg~~la~g~~-dg----~i~i~d~~~~~~~ 651 (811)
+++.|+.+..+ ..|.++|+..+......... ..+..++|+|||+.|+..+. ++ .|++||+.+++..
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR 277 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE
Confidence 99999888763 37888888776554443333 24778899999998866544 22 3999999988743
Q ss_pred E--EecCCCC---CeEEEEEccCCCEEEEE---------ecCCcEEEEEecCCCcceeEEEEecCCCC-----------C
Q psy9770 652 S--IHTDGNE---PIQVVKFSPDGKLLALG---------SRDNYIYVYEVSGDSRKYSRVGRCTGHSS-----------F 706 (811)
Q Consensus 652 ~--~~~~~~~---~i~~i~~spdg~~lasg---------s~dg~I~iwd~~~~~~~~~~~~~~~~h~~-----------~ 706 (811)
. .+..+.. ....++|+|||+.|+.. ..+..|++||+.++. +..+..|.. .
T Consensus 278 ~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~~~~~~ 352 (388)
T 3pe7_A 278 QLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT-----QHRVARHDTSWKVFEGDRQVT 352 (388)
T ss_dssp EEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE-----EEEEEECCCCCCCBTTBSSTT
T ss_pred EEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc-----eEEeccccCcccccccccccC
Confidence 3 3332100 01223799999988864 445689999998752 233444544 5
Q ss_pred eeEEEeCCCCCeEEEec-CCceEEEEECC
Q psy9770 707 ITHLDWSEDSMYIRSNS-GDYELLYWNAG 734 (811)
Q Consensus 707 V~~l~~spdg~~L~s~s-~Dg~i~iWd~~ 734 (811)
+.+++|+|||+.|+..+ .+|...+|.+.
T Consensus 353 ~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 353 HPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp CCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 78899999999887655 46666666543
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=1.3e-18 Score=189.56 Aligned_cols=298 Identities=11% Similarity=0.004 Sum_probs=201.2
Q ss_pred EEEEeCCCCcEEEEeccCCccccEEE-----EEEecCCCCcEEEEEeCCCCc--eEEEEEcccCCCcceEEEeeeCCCcE
Q psy9770 331 IRIWNSVSLFTVSIIGIGEFERSISC-----LSFSKADGGTFLCAVDEGNDY--NISVWDWQKSDRGHKITETKCSVDTV 403 (811)
Q Consensus 331 I~iWd~~t~~~~~~l~~~~h~~~V~~-----l~fs~~~dg~~Lasv~~s~d~--~i~vWd~~~~~~~~~~~~~~~~~~~V 403 (811)
...+|..++..+..+. .|...... .+||| ||++|++.. ..++ .|.+||+.+++ .......+...+
T Consensus 12 ~~~~~~~~g~~~~~lt--~~~~~~~~~~~~~~~~Sp--Dg~~l~~~~-~~~g~~~l~~~d~~~g~---~~~lt~~~~~~~ 83 (388)
T 3pe7_A 12 DTYQDASTGAQVTRLT--PPDVTCHRNYFYQKCFTR--DGSKLLFGG-AFDGPWNYYLLDLNTQV---ATQLTEGRGDNT 83 (388)
T ss_dssp EEEECTTTCCEEEECS--CTTSCEECCCTTSCCBCT--TSCEEEEEE-CTTSSCEEEEEETTTCE---EEECCCSSCBCS
T ss_pred eEEecCCCCcceEEec--CCcccccchhhcCccCCC--CCCEEEEEE-cCCCCceEEEEeCCCCc---eEEeeeCCCCCc
Confidence 3456788898888876 67666666 88999 899998753 3355 68889998887 555555555555
Q ss_pred EEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEE--EEEcCCCcEEEE---------------
Q psy9770 404 VAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTC--LAFTQGGEVLSG--------------- 466 (811)
Q Consensus 404 ~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~--l~~s~~g~llsg--------------- 466 (811)
..+.|+|++..++++..++.|++|++.+++...... .+...+.. ..+++++.++.+
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~-------~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~ 156 (388)
T 3pe7_A 84 FGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ-------VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWK 156 (388)
T ss_dssp SSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-------CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH
T ss_pred cceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee-------chhhcccccceeECCCCCeeccccccCcccccccccc
Confidence 578899999999988888999999999765433221 12223333 345899886542
Q ss_pred --------cCCCcEEEEecCCceEEEEeecccccceEEEEEec-CCcEEEEecCC------CcEEEEeCCCCCccceeee
Q psy9770 467 --------DSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLK-EGSIISAGGKD------GRLLQFDSNLQPTGYEAQI 531 (811)
Q Consensus 467 --------~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~-dg~~l~s~s~d------g~I~~wd~~~~~~~~~~~~ 531 (811)
..++.|++||+.+++..... .+...+..+.|+| ||+.|+....+ ..|.++|......
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~------ 228 (388)
T 3pe7_A 157 KFHEFYFTKPCCRLMRVDLKTGESTVIL--QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM------ 228 (388)
T ss_dssp HHHHHGGGCCCEEEEEEETTTCCEEEEE--EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC------
T ss_pred hhhhhhccCCcceEEEEECCCCceEEee--cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce------
Confidence 23478999999988766554 4667789999999 99988766543 2455555443322
Q ss_pred ccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecc--cceEEEEECCCCCeEEEEECC-----CeEEEEeC
Q psy9770 532 AEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHT--DELWALAAHPSLSQFLTAGFD-----RIVQLWDS 604 (811)
Q Consensus 532 ~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~--~~v~~l~~sp~~~~l~s~s~d-----g~v~iwd~ 604 (811)
..+..+. ..+..++|+|||+.|+..+.+ ..|.+||+
T Consensus 229 -------------------------------------~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 229 -------------------------------------RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp -------------------------------------EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred -------------------------------------EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec
Confidence 2222222 246678899999977665432 24999999
Q ss_pred CCCcEEEEecCCCC------eEEEEEcCCCCEEEEE---------EeCCeEEEEecCCcceeEEecCCCC----------
Q psy9770 605 MSHSVVWSKDIAEQ------AQSATFSPDGSIIIVG---------CIAGRWLVMDSETREAYSIHTDGNE---------- 659 (811)
Q Consensus 605 ~~~~~~~~~~~~~~------v~~~~~spdg~~la~g---------~~dg~i~i~d~~~~~~~~~~~~~~~---------- 659 (811)
.+++.......... ...++|+|||+.|++. ..+..|++||+.+++... +..+..
T Consensus 272 ~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~~~~ 350 (388)
T 3pe7_A 272 ETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHR-VARHDTSWKVFEGDRQ 350 (388)
T ss_dssp TTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEE-EEECCCCCCCBTTBSS
T ss_pred CCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEE-eccccCcccccccccc
Confidence 99875443222221 1123799999988865 345689999999876543 443444
Q ss_pred -CeEEEEEccCCCEEEEEe-cCCcEEEEEecC
Q psy9770 660 -PIQVVKFSPDGKLLALGS-RDNYIYVYEVSG 689 (811)
Q Consensus 660 -~i~~i~~spdg~~lasgs-~dg~I~iwd~~~ 689 (811)
.+..++|+|||++|+..+ .++...||.+.-
T Consensus 351 ~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 351 VTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp TTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred cCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 578889999999888766 467667776553
No 163
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.80 E-value=5.9e-19 Score=194.90 Aligned_cols=206 Identities=12% Similarity=0.050 Sum_probs=157.3
Q ss_pred ccceEEEEECCCCCeEEEEECCCeEEEEeCCCC-----------c-----EEEEecCCCCeEEEEEcCCCCEEE----EE
Q psy9770 575 TDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH-----------S-----VVWSKDIAEQAQSATFSPDGSIII----VG 634 (811)
Q Consensus 575 ~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~-----------~-----~~~~~~~~~~v~~~~~spdg~~la----~g 634 (811)
...+..+++++++.++++++.|+ +++|+.... . ....+.+...|.+++|+|+|++|+ +|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578899999999999999887 888874210 1 112234567899999999999999 67
Q ss_pred EeCCeEEEEecCCc--------c---eeEEecCCCCCeEEEEEccC-CCEEEEEecCCcEEEEEecCCCcceeEEEEecC
Q psy9770 635 CIAGRWLVMDSETR--------E---AYSIHTDGNEPIQVVKFSPD-GKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTG 702 (811)
Q Consensus 635 ~~dg~i~i~d~~~~--------~---~~~~~~~~~~~i~~i~~spd-g~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~ 702 (811)
+.|+.|+|||+.++ + .+..+.+|...|.+++|+|+ +.+|++++.||.|++||+.++ ..+....+
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~----~~~~~~~~ 190 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET----VKVCATLP 190 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS----EEEEEEEC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC----cceeeccC
Confidence 77999999998765 2 24556678999999999998 899999999999999999986 33445567
Q ss_pred CCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCC
Q psy9770 703 HSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHD 782 (811)
Q Consensus 703 h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~d 782 (811)
|...|++++|+|+|++|++++.||.|++||++ ++....+..... ....|...|.+++|+++
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~------------------~~~~~~~~v~~v~w~~~ 251 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPF------------------YESDHPVRVLDVLWIGT 251 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTT------------------CCTTSCEEEEEEEEEET
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcc------------------cCCCCceeEEEEEEecC
Confidence 89999999999999999999999999999998 443221111000 01123457999999999
Q ss_pred CCEEEEE-cCCC------cEEEEeCCCCC
Q psy9770 783 ARVIATG-DDFG------KLKLYSYPAVQ 804 (811)
Q Consensus 783 g~~Las~-~~dg------~v~vw~~~~~~ 804 (811)
+.++++. ..|| .+++|+++..+
T Consensus 252 ~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 252 YVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp TEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred ceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 9888643 3443 38999998764
No 164
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.80 E-value=1.6e-17 Score=183.42 Aligned_cols=201 Identities=10% Similarity=0.035 Sum_probs=152.5
Q ss_pred ccceEEccCCcEEEEec-cEEEEEeCCCC-----------ce-----EEeccCCCCeEEEEEcCCCcEEE----EeeccC
Q psy9770 263 RSNLYLLPTGEIVYFVA-AVAVLYNVEEQ-----------TQ-----RHYLGHTDDIKCLSIHPNKLLIA----TGQVAG 321 (811)
Q Consensus 263 ~~~l~~spdg~~l~~~~-~~i~i~d~~~~-----------~~-----~~~~~h~~~V~~la~spdg~~La----sg~~dg 321 (811)
.+.+++++++.++++++ ..+.||+.... .. .....|...|.+++|+|+|++|| +|+.|+
T Consensus 39 ~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~ 118 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGS 118 (434)
T ss_dssp CBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEE
T ss_pred ccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCc
Confidence 46789999999888775 45888765321 11 11234567899999999999999 788888
Q ss_pred CCCCCCCCeEEEEeCCCC--------cE---EEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCc
Q psy9770 322 HDAREGKPHIRIWNSVSL--------FT---VSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRG 390 (811)
Q Consensus 322 ~~~~~~~~~I~iWd~~t~--------~~---~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~ 390 (811)
.|+|||+.++ +. +..+ .+|...|.+++|+| +++.+|++ ++.|++|++||++++.
T Consensus 119 --------~v~iwd~~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~~p-~~~~~las--~s~Dg~v~iwD~~~~~-- 183 (434)
T 2oit_A 119 --------IIAFFDVRTFSNEAKQQKRPFAYHKLL--KDAGGMVIDMKWNP-TVPSMVAV--CLADGSIAVLQVTETV-- 183 (434)
T ss_dssp --------EEEEEEHHHHHCTTCSSCCCSEEEECC--CSGGGSEEEEEECS-SCTTEEEE--EETTSCEEEEEESSSE--
T ss_pred --------eEEEEEccccccCCcCCcceeeeeecc--CCCCCceEEEEECC-CCCCEEEE--EECCCeEEEEEcCCCc--
Confidence 9999998765 22 3333 48999999999999 23788988 6899999999999886
Q ss_pred ceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEE--EEcC
Q psy9770 391 HKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVL--SGDS 468 (811)
Q Consensus 391 ~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~ll--sg~~ 468 (811)
.+.....|...|.+++|+|++..+++++.|+.|++||+. +..............+|...+.+++|++++.++ ....
T Consensus 184 -~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~ 261 (434)
T 2oit_A 184 -KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAA 261 (434)
T ss_dssp -EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEET
T ss_pred -ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccC
Confidence 677777889999999999999999999999999999987 544443332222112345689999999998865 2333
Q ss_pred CC------cEEEEecCCc
Q psy9770 469 NG------NIIVWTRGSN 480 (811)
Q Consensus 469 dg------~I~vwd~~~~ 480 (811)
+| .+++|++...
T Consensus 262 dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 262 DGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TCCSSSCCEEEEEECCCT
T ss_pred CCccCCCCceEEEEeccC
Confidence 43 3899998754
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.80 E-value=3.2e-18 Score=186.96 Aligned_cols=314 Identities=8% Similarity=-0.018 Sum_probs=202.0
Q ss_pred EEEeCCCCc-eEEeccCCCC-----eEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEE
Q psy9770 283 VLYNVEEQT-QRHYLGHTDD-----IKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISC 356 (811)
Q Consensus 283 ~i~d~~~~~-~~~~~~h~~~-----V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~ 356 (811)
...|..++. .+.+..+... +.+++|+|||++||.....+ +...|.+||+.+++...... ++......
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~-----g~~~l~~~d~~~~~~~~l~~--~~~~~~~~ 85 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFD-----GNRNYYLLNLETQQAVQLTE--GKGDNTFG 85 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTT-----SSCEEEEEETTTTEEEECCC--SSCBCTTT
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecC-----CCceEEEEECCCCcEEEeec--CCCCcccc
Confidence 345666664 3445554333 77889999999998876542 12379999999987655432 33333334
Q ss_pred EEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceee
Q psy9770 357 LSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLY 436 (811)
Q Consensus 357 l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~ 436 (811)
+.|+| ||++|+.+ +.++.|.+||+.+++ .......+.. |++++..++....+....+|.
T Consensus 86 ~~~sp--dg~~l~~~--~~~~~l~~~d~~~~~---~~~~~~~~~~------~~~~g~~l~~~~~~~~~~~~~-------- 144 (396)
T 3c5m_A 86 GFIST--DERAFFYV--KNELNLMKVDLETLE---EQVIYTVDEE------WKGYGTWVANSDCTKLVGIEI-------- 144 (396)
T ss_dssp CEECT--TSSEEEEE--ETTTEEEEEETTTCC---EEEEEECCTT------EEEEEEEEECTTSSEEEEEEE--------
T ss_pred ceECC--CCCEEEEE--EcCCcEEEEECCCCC---cEEEEecccc------cCCCCCEEEeccCCccccccc--------
Confidence 78999 89999874 566789999999887 4443333333 444444333333333333332
Q ss_pred eecccccccCCCCceEEEEEEcCCCcEE-EE-----cCCCcEEEEecCCceEEEEeecccccceEEEEEec-CCcEEEEe
Q psy9770 437 KKQGIFEMIRDKPKYVTCLAFTQGGEVL-SG-----DSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLK-EGSIISAG 509 (811)
Q Consensus 437 ~~~~~~~~l~~~~~~v~~l~~s~~g~ll-sg-----~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~-dg~~l~s~ 509 (811)
..+.|+|+++.+ .. ..+..|++||+.+++..... .+...+..+.|+| ++..|+..
T Consensus 145 ----------------~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~--~~~~~~~~~~~sp~dg~~l~~~ 206 (396)
T 3c5m_A 145 ----------------LKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH--QDTAWLGHPIYRPFDDSTVGFC 206 (396)
T ss_dssp ----------------EGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE--EESSCEEEEEEETTEEEEEEEE
T ss_pred ----------------cccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec--cCCcccccceECCCCCCEEEEE
Confidence 123467788732 22 46678999999988766555 4677889999999 78866655
Q ss_pred cCC------CcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeec--ccceEEE
Q psy9770 510 GKD------GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGH--TDELWAL 581 (811)
Q Consensus 510 s~d------g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h--~~~v~~l 581 (811)
+.+ ..|.+||+..... ..+..+ ...+..+
T Consensus 207 ~~~~~~~~~~~l~~~d~~~~~~-------------------------------------------~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 207 HEGPHDLVDARMWLVNEDGSNV-------------------------------------------RKIKEHAEGESCTHE 243 (396)
T ss_dssp ECSCSSSCSCCCEEEETTSCCC-------------------------------------------EESSCCCTTEEEEEE
T ss_pred ecCCCCCCCceEEEEECCCCce-------------------------------------------eEeeccCCCccccce
Confidence 432 2455555543322 111111 2246778
Q ss_pred EECCCCCeEEEEECC-----CeEEEEeCCCCcEEEEecCCCCeEEEEEcC-CCCEEEEEE----------------eCCe
Q psy9770 582 AAHPSLSQFLTAGFD-----RIVQLWDSMSHSVVWSKDIAEQAQSATFSP-DGSIIIVGC----------------IAGR 639 (811)
Q Consensus 582 ~~sp~~~~l~s~s~d-----g~v~iwd~~~~~~~~~~~~~~~v~~~~~sp-dg~~la~g~----------------~dg~ 639 (811)
+|+|++++|+.++.+ +.|.+||+.+++......... .. +.|+| ||++++++. .++.
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 999999988777654 459999999887654433332 33 89999 999888754 2478
Q ss_pred EEEEecCCcceeEEecCCCC-----------CeEEEEEccCCCEEEEEec-CCcEEEEEec
Q psy9770 640 WLVMDSETREAYSIHTDGNE-----------PIQVVKFSPDGKLLALGSR-DNYIYVYEVS 688 (811)
Q Consensus 640 i~i~d~~~~~~~~~~~~~~~-----------~i~~i~~spdg~~lasgs~-dg~I~iwd~~ 688 (811)
|++||+.+++... +..+.. .+..++|+|||++|+.++. ++...||.+.
T Consensus 322 i~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 322 LYVLNTKAKSAQK-LCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp EEEEETTTTBCCE-EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EEEEecccCceEE-ccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 9999998876543 333333 2566899999999887764 4555555554
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.80 E-value=2.5e-17 Score=177.40 Aligned_cols=292 Identities=11% Similarity=0.045 Sum_probs=201.1
Q ss_pred eEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEe--------CCCCceEEEEEcccCCCcceEEEeeeC--
Q psy9770 330 HIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVD--------EGNDYNISVWDWQKSDRGHKITETKCS-- 399 (811)
Q Consensus 330 ~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~--------~s~d~~i~vWd~~~~~~~~~~~~~~~~-- 399 (811)
.|.+||..+++.+..+. .+... .++|+| ||++|++.. +..++.|.+||..+.+ .+..+...
T Consensus 32 ~v~v~D~~t~~~~~~i~--~g~~p--~i~~sp--dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~---~~~~i~~~~~ 102 (361)
T 2oiz_A 32 RVHVYDYTNGKFLGMVP--TAFNG--HVQVSN--DGKKIYTMTTYHERITRGKRSDVVEVWDADKLT---FEKEISLPPK 102 (361)
T ss_dssp EEEEEETTTCCEEEEEE--CCEEE--EEEECT--TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC---EEEEEEECTT
T ss_pred eEEEEECCCCeEEEEec--CCCCC--ceEECC--CCCEEEEEEecccccccCCCCCEEEEEECcCCc---EEEEEEcCcc
Confidence 89999999999998887 44444 899999 899998742 1247789999999888 77777643
Q ss_pred ----CCcEEEEEecCCCCCeEEEEC--CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc--EEEEcCCCc
Q psy9770 400 ----VDTVVAAEFHPLDRNNIVTCG--KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE--VLSGDSNGN 471 (811)
Q Consensus 400 ----~~~V~~v~fsp~~~~ll~~~~--d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~--llsg~~dg~ 471 (811)
......++|+|++++++++.. ++.|.+||+.+++.+...... . ....+.+.|++. +++.+.||.
T Consensus 103 ~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~----~----~~~~v~~~p~~~~~~~~~~~dg~ 174 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA----A----GCWSVIPQPNRPRSFMTICGDGG 174 (361)
T ss_dssp BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG----T----TEEEEEECTTSSSEEEEEETTSS
T ss_pred ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC----C----CcceeEEcCCCCeeEEEECCCCc
Confidence 235678999999999988864 578999999977554431111 1 123356777763 678888999
Q ss_pred EEEEecCC-ceEEEEee-----cccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCC
Q psy9770 472 IIVWTRGS-NTISKFIR-----NVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGR 545 (811)
Q Consensus 472 I~vwd~~~-~~~~~~~~-----~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~ 545 (811)
+.+|+... ++...... ..+..++ .+.+++++..++..+.++.|.++|+.........
T Consensus 175 ~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~---------------- 237 (361)
T 2oiz_A 175 LLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDG---------------- 237 (361)
T ss_dssp EEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEE----------------
T ss_pred EEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecc----------------
Confidence 99998764 44442111 0122222 2334566766666777888888887654331000
Q ss_pred CCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEEC-----------CCeEEEEeCCCCcEEEEec
Q psy9770 546 GSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGF-----------DRIVQLWDSMSHSVVWSKD 614 (811)
Q Consensus 546 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~-----------dg~v~iwd~~~~~~~~~~~ 614 (811)
.|++.................++|+|+++.++.+.. .+.|.+||+.+++.+..+.
T Consensus 238 --------------~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~ 303 (361)
T 2oiz_A 238 --------------PWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP 303 (361)
T ss_dssp --------------EEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE
T ss_pred --------------cccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe
Confidence 011100000000000011112678999887776643 3589999999999998887
Q ss_pred CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCc--ceeEEecCCCCCeEEEEEccCCC
Q psy9770 615 IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETR--EAYSIHTDGNEPIQVVKFSPDGK 671 (811)
Q Consensus 615 ~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~i~~spdg~ 671 (811)
... +.+++|+|||++|+++.. +.|.+||..++ +.+..+.........++++|||+
T Consensus 304 ~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 304 GRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred cCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 777 999999999999998886 99999999999 99988766667788999999986
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=1.4e-17 Score=180.12 Aligned_cols=268 Identities=12% Similarity=0.047 Sum_probs=177.4
Q ss_pred CcEEEEeC--CCCCccceeeec-cccCCeEEEeeCCCCe-EEEEeCCCeEEEEEcc-CCceeeeeecc--cceEEEEECC
Q psy9770 513 GRLLQFDS--NLQPTGYEAQIA-EHLGGIRTVSEGRGSQ-LIVGTTRNCILVGSLN-LGFSPVVLGHT--DELWALAAHP 585 (811)
Q Consensus 513 g~I~~wd~--~~~~~~~~~~~~-~~~~~v~~l~~~~~~~-l~~~~~~~~i~~~d~~-~~~~~~~~~h~--~~v~~l~~sp 585 (811)
+.|.+|++ .++......... .....+..+++++++. ++++..+ .|.+|++. ++....+..+. +.+..++|+|
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp 92 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT 92 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC
Confidence 46777665 333331111111 2234577899999887 5555555 99999987 55333222221 3355689999
Q ss_pred CCCe--EEEEE-------------CCCeEEEEeCC-CCcEEEEec-----CCCCeEEEEEcCCCCEEEEEEe-CCeEEEE
Q psy9770 586 SLSQ--FLTAG-------------FDRIVQLWDSM-SHSVVWSKD-----IAEQAQSATFSPDGSIIIVGCI-AGRWLVM 643 (811)
Q Consensus 586 ~~~~--l~s~s-------------~dg~v~iwd~~-~~~~~~~~~-----~~~~v~~~~~spdg~~la~g~~-dg~i~i~ 643 (811)
++++ ++++. .++.+.+|++. .++...... ....+.+++|+|||++|+++.. ++.|.+|
T Consensus 93 dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~ 172 (365)
T 1jof_A 93 NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTH 172 (365)
T ss_dssp CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEE
Confidence 9994 44542 68999999997 455543322 4567999999999999888764 6799999
Q ss_pred ecC-Cccee--EEec--CCCCCeEEEEEccCCCEEEEEec-CCcEEEEEecCCCccee----EEEEec----CCCC----
Q psy9770 644 DSE-TREAY--SIHT--DGNEPIQVVKFSPDGKLLALGSR-DNYIYVYEVSGDSRKYS----RVGRCT----GHSS---- 705 (811)
Q Consensus 644 d~~-~~~~~--~~~~--~~~~~i~~i~~spdg~~lasgs~-dg~I~iwd~~~~~~~~~----~~~~~~----~h~~---- 705 (811)
|+. +++.. ..+. .+...+..++|+|||++|++++. ++.|.+|+++....... .+..+. +|..
T Consensus 173 ~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 252 (365)
T 1jof_A 173 RKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGK 252 (365)
T ss_dssp EECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSS
T ss_pred EECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccc
Confidence 998 67643 2333 23566899999999999988775 68999999874221111 122222 2232
Q ss_pred --CeeEEE-eCCCCCeEEEecCCc------eEEEEECC-CCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccc
Q psy9770 706 --FITHLD-WSEDSMYIRSNSGDY------ELLYWNAG-TCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVN 775 (811)
Q Consensus 706 --~V~~l~-~spdg~~L~s~s~Dg------~i~iWd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~ 775 (811)
.+..++ |+|||++|+++..+. .|.+|++. +++....... + ..+...+.
T Consensus 253 ~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~---~-------------------~~~~~~~~ 310 (365)
T 1jof_A 253 GLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFL---S-------------------PTPTSGGH 310 (365)
T ss_dssp BSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEE---E-------------------ECSSCCTT
T ss_pred ccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeee---e-------------------ecCCCCcc
Confidence 588999 999999988765432 89999996 4542210000 0 01133467
Q ss_pred eEEecC---CCCEEEEEcCC-CcEEEEeCCCC
Q psy9770 776 SCERSH---DARVIATGDDF-GKLKLYSYPAV 803 (811)
Q Consensus 776 ~l~~s~---dg~~Las~~~d-g~v~vw~~~~~ 803 (811)
.++|+| ||++|++++.+ +.|.||+++..
T Consensus 311 ~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 311 SNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 899999 89999998864 89999998754
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.78 E-value=8.4e-17 Score=173.93 Aligned_cols=271 Identities=14% Similarity=0.054 Sum_probs=183.1
Q ss_pred EEEEcCC--CcEEEEec--CCceEEEEee--cccccceEEEEEecCCcEEEEecCCCcEEEEeCC-CCCccceeeecccc
Q psy9770 463 VLSGDSN--GNIIVWTR--GSNTISKFIR--NVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSN-LQPTGYEAQIAEHL 535 (811)
Q Consensus 463 llsg~~d--g~I~vwd~--~~~~~~~~~~--~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~-~~~~~~~~~~~~~~ 535 (811)
+++|+.. +.|.+|++ .+++....-. ......+..++|+|+|++|++++.+ .|.+|++. .+...........
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~- 82 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG- 82 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-
Confidence 3445442 46777654 5565433211 1233468899999999999888877 99999986 5544111121111
Q ss_pred CCeEEEeeCCCCe--EE-EEe-------------CCCeEEEEEccC-Cce-eeee----ecccceEEEEECCCCCeEEEE
Q psy9770 536 GGIRTVSEGRGSQ--LI-VGT-------------TRNCILVGSLNL-GFS-PVVL----GHTDELWALAAHPSLSQFLTA 593 (811)
Q Consensus 536 ~~v~~l~~~~~~~--l~-~~~-------------~~~~i~~~d~~~-~~~-~~~~----~h~~~v~~l~~sp~~~~l~s~ 593 (811)
+....++++|++. ++ ++. .++.+.+|++.. +.. ..+. .+...+.+++|+|+|++|+++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 2345578899987 33 332 578899999874 322 2222 245679999999999988877
Q ss_pred EC-CCeEEEEeCC-CCcEEE--Eec---CCCCeEEEEEcCCCCEEEEEEe-CCeEEEEecC--Cccee------EEecC-
Q psy9770 594 GF-DRIVQLWDSM-SHSVVW--SKD---IAEQAQSATFSPDGSIIIVGCI-AGRWLVMDSE--TREAY------SIHTD- 656 (811)
Q Consensus 594 s~-dg~v~iwd~~-~~~~~~--~~~---~~~~v~~~~~spdg~~la~g~~-dg~i~i~d~~--~~~~~------~~~~~- 656 (811)
.. ++.|++||+. +++... ... +...+..++|+|||++|+++.. ++.|.+|++. +++.. ..+..
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 242 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG 242 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC
Confidence 64 6799999998 676532 232 2567999999999999988775 6899999765 45542 12221
Q ss_pred ---CCC------CeEEEE-EccCCCEEEEEecCC------cEEEEEecCCCcceeEEE-EecCCCCCeeEEEeCC---CC
Q psy9770 657 ---GNE------PIQVVK-FSPDGKLLALGSRDN------YIYVYEVSGDSRKYSRVG-RCTGHSSFITHLDWSE---DS 716 (811)
Q Consensus 657 ---~~~------~i~~i~-~spdg~~lasgs~dg------~I~iwd~~~~~~~~~~~~-~~~~h~~~V~~l~~sp---dg 716 (811)
+.. .+..++ |+|||++|+++..+. .|.+|++...+. ...+. ....+...+..++|+| ||
T Consensus 243 ~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~-~~~~~~~~~~~~~~~~~~a~sp~~~dg 321 (365)
T 1jof_A 243 IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS-IEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC-EEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC-EEEeeeeeecCCCCcccceecCCCcCC
Confidence 121 478999 999999988776432 899999973222 22222 2334555677889999 89
Q ss_pred CeEEEecCC-ceEEEEECCCC
Q psy9770 717 MYIRSNSGD-YELLYWNAGTC 736 (811)
Q Consensus 717 ~~L~s~s~D-g~i~iWd~~~~ 736 (811)
++|++++.+ +.|.+|+++..
T Consensus 322 ~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 322 EWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TEEEEECSSSCEEEEEEEETT
T ss_pred CEEEEEEcCCCeEEEEEEchh
Confidence 999998764 89999998765
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=4.3e-18 Score=185.91 Aligned_cols=325 Identities=11% Similarity=-0.019 Sum_probs=206.3
Q ss_pred EEEEcccCCCcceEEEeeeCCCc-----EEEEEecCCCCCeEEEECC---CcEEEEEEcCCceeeeecccccccCCCCce
Q psy9770 380 SVWDWQKSDRGHKITETKCSVDT-----VVAAEFHPLDRNNIVTCGK---SHINFWTIDAGGTLYKKQGIFEMIRDKPKY 451 (811)
Q Consensus 380 ~vWd~~~~~~~~~~~~~~~~~~~-----V~~v~fsp~~~~ll~~~~d---~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~ 451 (811)
..+|..++. .+..+..+... +..++|+|+++.++++... ..|.+|++.++. ..... ..+...
T Consensus 13 ~~~d~~~g~---~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~-~~~l~------~~~~~~ 82 (396)
T 3c5m_A 13 TFVDSDTQV---KVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ-AVQLT------EGKGDN 82 (396)
T ss_dssp EEECTTTCC---EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE-EEECC------CSSCBC
T ss_pred eeecCCCCc---ceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc-EEEee------cCCCCc
Confidence 344667776 66666655433 6778999999888877653 367778877443 22221 111111
Q ss_pred EEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceee
Q psy9770 452 VTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ 530 (811)
Q Consensus 452 v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~ 530 (811)
...+.|+|||+ ++.++.++.|++||+.+++...... .+.. |+++|+.|+....++...+|.
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~-~~~~------~~~~g~~l~~~~~~~~~~~~~----------- 144 (396)
T 3c5m_A 83 TFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYT-VDEE------WKGYGTWVANSDCTKLVGIEI----------- 144 (396)
T ss_dssp TTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CCTT------EEEEEEEEECTTSSEEEEEEE-----------
T ss_pred cccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEe-cccc------cCCCCCEEEeccCCccccccc-----------
Confidence 22378999998 5577778899999999887665554 3333 667777777555444333221
Q ss_pred eccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEE-----ECCCeEEEEeCC
Q psy9770 531 IAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTA-----GFDRIVQLWDSM 605 (811)
Q Consensus 531 ~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~-----s~dg~v~iwd~~ 605 (811)
..+.++|+++.++.. ..+..|.+||+.
T Consensus 145 ------------------------------------------------~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~ 176 (396)
T 3c5m_A 145 ------------------------------------------------LKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIE 176 (396)
T ss_dssp ------------------------------------------------EGGGCCCCCSHHHHHHHHHTCCCEEEEEEETT
T ss_pred ------------------------------------------------cccccCCCCcceeeeeeccCCCcceEEEEECC
Confidence 012356677766544 356789999999
Q ss_pred CCcEEEEecCCCCeEEEEEcC-CCCEEEEEEeC------CeEEEEecCCcceeEEecCC-CCCeEEEEEccCCCEEEEEe
Q psy9770 606 SHSVVWSKDIAEQAQSATFSP-DGSIIIVGCIA------GRWLVMDSETREAYSIHTDG-NEPIQVVKFSPDGKLLALGS 677 (811)
Q Consensus 606 ~~~~~~~~~~~~~v~~~~~sp-dg~~la~g~~d------g~i~i~d~~~~~~~~~~~~~-~~~i~~i~~spdg~~lasgs 677 (811)
+++..........+..+.|+| +++.|+..+.+ ..|.+||+..++........ ...+..++|+|||++|+.++
T Consensus 177 ~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (396)
T 3c5m_A 177 TGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVS 256 (396)
T ss_dssp TCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred CCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEe
Confidence 888766666677889999999 88878776653 36888998766544333321 23578899999999888776
Q ss_pred cC-----CcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCC-CCCeEEEec----------------CCceEEEEECCC
Q psy9770 678 RD-----NYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSE-DSMYIRSNS----------------GDYELLYWNAGT 735 (811)
Q Consensus 678 ~d-----g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~L~s~s----------------~Dg~i~iWd~~~ 735 (811)
.+ +.|++||+.++.. ..+..+.+ .. +.|+| ||++|++++ .+..|++||+.+
T Consensus 257 ~~~~~~~~~l~~~d~~~g~~--~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 257 YFKGQTDRVIYKANPETLEN--EEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp EETTTCCEEEEEECTTTCCE--EEEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred cCCCCccceEEEEECCCCCe--EEeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 54 4499999987632 22222222 23 89999 999888754 347899999988
Q ss_pred CcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEc-CCCcEEEEeCCC
Q psy9770 736 CRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGD-DFGKLKLYSYPA 802 (811)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~-~dg~v~vw~~~~ 802 (811)
++... +... ... + +++. ......+..++|+|||+.|+.++ .++...||.++.
T Consensus 330 ~~~~~-l~~~--------~~~--~---~~~~-~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 330 KSAQK-LCKH--------STS--W---DVLD-GDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp TBCCE-EEEC--------CCC--C---CCBT-TBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred CceEE-ccCC--------CCc--c---cccc-ccccCCCCCceEccCCCeEEEEecCCCCceEEEEEE
Confidence 76321 1000 000 0 0000 00011356789999999887655 456666666553
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.76 E-value=4.6e-16 Score=167.50 Aligned_cols=297 Identities=12% Similarity=0.123 Sum_probs=196.6
Q ss_pred cCCcEEEEec--------cEEEEEeCCCCceE-EeccCCCCeEEEEEcCCCcEEEEeec----------cCCCCCCCCCe
Q psy9770 270 PTGEIVYFVA--------AVAVLYNVEEQTQR-HYLGHTDDIKCLSIHPNKLLIATGQV----------AGHDAREGKPH 330 (811)
Q Consensus 270 pdg~~l~~~~--------~~i~i~d~~~~~~~-~~~~h~~~V~~la~spdg~~Lasg~~----------dg~~~~~~~~~ 330 (811)
++++.+|..+ +.|.+||..+++.. .+..+..+ .++|+|||++|+++.. ++ .
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~--------~ 82 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSD--------V 82 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEE--------E
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCC--------E
Confidence 4667777652 48999999887653 34444333 8999999999998863 34 7
Q ss_pred EEEEeCCCCcEEEEeccCC----ccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEE-eeeCCCcEEE
Q psy9770 331 IRIWNSVSLFTVSIIGIGE----FERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITE-TKCSVDTVVA 405 (811)
Q Consensus 331 I~iWd~~t~~~~~~l~~~~----h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~-~~~~~~~V~~ 405 (811)
|.+||..+++.+..+.+.. +......++|+| ||++|++.....++.|.+||+++++ .+.. +... ....
T Consensus 83 v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp--dg~~l~v~n~~~~~~v~v~d~~~~~---~~~~~i~~~--~~~~ 155 (361)
T 2oiz_A 83 VEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT--DGKFIVLQNASPATSIGIVDVAKGD---YVEDVTAAA--GCWS 155 (361)
T ss_dssp EEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT--TSSEEEEEEESSSEEEEEEETTTTE---EEEEEGGGT--TEEE
T ss_pred EEEEECcCCcEEEEEEcCccccccCCCcceEEECC--CCCEEEEECCCCCCeEEEEECCCCc---EEEEEecCC--Ccce
Confidence 9999999999998886321 224567899999 8999987422347899999999987 6666 4432 2233
Q ss_pred EEecCCCCC-eEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCCceE-
Q psy9770 406 AEFHPLDRN-NIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTI- 482 (811)
Q Consensus 406 v~fsp~~~~-ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~- 482 (811)
+.+.|++.. +++.+.||.+.+|+++....+.........+.....+ ..+.+.+++. ++..+.++.|.++|+.....
T Consensus 156 v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~ 234 (361)
T 2oiz_A 156 VIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVK 234 (361)
T ss_dssp EEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCE
T ss_pred eEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCce
Confidence 567776644 4555678999999997533332111000000111111 1233356665 55666789999999875432
Q ss_pred -EEEeec-----cc----ccceEEEEEecCCcEEEEecC-----------CCcEEEEeCCCCCccceeeeccccCCeEEE
Q psy9770 483 -SKFIRN-----VH----EGSVFSICVLKEGSIISAGGK-----------DGRLLQFDSNLQPTGYEAQIAEHLGGIRTV 541 (811)
Q Consensus 483 -~~~~~~-----~h----~~~V~~l~~s~dg~~l~s~s~-----------dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l 541 (811)
...+.. .+ ......++|+++++.++.+.. .+.|.+||+.+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~---------------- 298 (361)
T 2oiz_A 235 VDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR---------------- 298 (361)
T ss_dssp EEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE----------------
T ss_pred ecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE----------------
Confidence 222110 00 111223678888777665432 23677777665543
Q ss_pred eeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCC--cEEEEe-cCCCC
Q psy9770 542 SEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH--SVVWSK-DIAEQ 618 (811)
Q Consensus 542 ~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~--~~~~~~-~~~~~ 618 (811)
...+..+. +.+++|+|++++|++++. +.|.+||..++ +.+..+ .....
T Consensus 299 --------------------------v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~ 349 (361)
T 2oiz_A 299 --------------------------VARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEA 349 (361)
T ss_dssp --------------------------EEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSS
T ss_pred --------------------------EEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCC
Confidence 11223333 789999999999998887 99999999999 888885 67788
Q ss_pred eEEEEEcCCCC
Q psy9770 619 AQSATFSPDGS 629 (811)
Q Consensus 619 v~~~~~spdg~ 629 (811)
...++++|+|.
T Consensus 350 P~~~~~~p~G~ 360 (361)
T 2oiz_A 350 SLQVQFHPVGG 360 (361)
T ss_dssp EEEEEECCCSC
T ss_pred cEEEEecCCCC
Confidence 99999999985
No 171
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.76 E-value=2.2e-13 Score=162.83 Aligned_cols=483 Identities=10% Similarity=0.083 Sum_probs=314.0
Q ss_pred ccceEEccCCcEEEEeccEEEEEeCCCCceEEeccCCC----CeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCC
Q psy9770 263 RSNLYLLPTGEIVYFVAAVAVLYNVEEQTQRHYLGHTD----DIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVS 338 (811)
Q Consensus 263 ~~~l~~spdg~~l~~~~~~i~i~d~~~~~~~~~~~h~~----~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t 338 (811)
+..|...++|.+.+...+.+..||..+.+...+..... .|.++...++|.+.+... . -|.+||..+
T Consensus 90 I~~i~~d~~g~lWigT~~Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~-~---------gl~~~~~~~ 159 (795)
T 4a2l_A 90 SRIVKTDSQGRVWIGTRDGLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP-E---------GLIMFDIKE 159 (795)
T ss_dssp EEEEEECTTSCEEEEESSCEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET-T---------EEEEEETTT
T ss_pred eeEEEECCCCCEEEEeCCchheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC-C---------ceEEEECCC
Confidence 45666778888776666678999998876555543211 188999999997666443 4 489999877
Q ss_pred CcEEEEeccCCc-ccc-EEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEe--eeCCCcEEEEEecCCCCC
Q psy9770 339 LFTVSIIGIGEF-ERS-ISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITET--KCSVDTVVAAEFHPLDRN 414 (811)
Q Consensus 339 ~~~~~~l~~~~h-~~~-V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~--~~~~~~V~~v~fsp~~~~ 414 (811)
++... +.. .+ ... |.++...+ +|.+.+. ..++-|..|+.++++ . ..+ ......|.++...++ +.
T Consensus 160 ~~~~~-~~~-~~~~~~~i~~i~~d~--~g~lwig---t~~~Gl~~~~~~~~~---~-~~~~~~~~~~~i~~i~~d~~-g~ 227 (795)
T 4a2l_A 160 SKFID-DSF-STAMHKTIASTLYRQ--GDQIYIG---TSTDGLYTYSITQKT---F-EKVIPILGTKQIQAILQQSP-TR 227 (795)
T ss_dssp TEEEC-SSS-CHHHHTCCEEEEEEE--TTEEEEE---ESSSCEEEEETTTCC---E-EECC----CCCEEEEEEEET-TE
T ss_pred CEEEe-ccC-CCCCCcceEEEEECC--CCCEEEE---ECCCCEEEEeCCCCe---E-EEecCCCCCCeeEEEEEcCC-CC
Confidence 65432 211 11 123 88888887 7777764 444458889987765 2 222 123457888887774 45
Q ss_pred eEEEECCCcEEEEEEcCCceeeeecccc-cccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeec-----
Q psy9770 415 NIVTCGKSHINFWTIDAGGTLYKKQGIF-EMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRN----- 488 (811)
Q Consensus 415 ll~~~~d~~i~iwd~~~~~~~~~~~~~~-~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~----- 488 (811)
+.+++.++.+..|+..++ .+....... ....-....|.++...++|.+..|+.+ -|.+||..++........
T Consensus 228 lwigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~ 305 (795)
T 4a2l_A 228 IWVATEGAGLFLINPKTK-EIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENG 305 (795)
T ss_dssp EEEEEBSSCEEEEETTTT-EEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTT
T ss_pred EEEEECCCCeEEEeCCCC-eEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCC
Confidence 666665555888887643 232221110 000112356999999999998888776 589999887766544321
Q ss_pred -ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeec----cccCCeEEEeeCCCCeEEEEeCCCeEEEEEc
Q psy9770 489 -VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIA----EHLGGIRTVSEGRGSQLIVGTTRNCILVGSL 563 (811)
Q Consensus 489 -~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~----~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~ 563 (811)
.....|.++...++|.+.+ |+.++-|..|+............. -....|.++...+++.+.+|+.++.|..++.
T Consensus 306 ~l~~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~ 384 (795)
T 4a2l_A 306 SLSQRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNP 384 (795)
T ss_dssp SCSSSCEEEEEECTTSCEEE-EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECT
T ss_pred CCCCCcEEEEEEeCCcCEEE-EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcC
Confidence 1235799999999998776 777788999987655441111111 1234689999999999999999999999998
Q ss_pred cCCceeeee---------ecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEec-----CCCCeEEEEEcCCCC
Q psy9770 564 NLGFSPVVL---------GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKD-----IAEQAQSATFSPDGS 629 (811)
Q Consensus 564 ~~~~~~~~~---------~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-----~~~~v~~~~~spdg~ 629 (811)
.++....+. -....|.+++..+++..|..|+.++-|.+||..+++...... ....|.++...++|.
T Consensus 385 ~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~ 464 (795)
T 4a2l_A 385 ITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN 464 (795)
T ss_dssp TTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC
T ss_pred CCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC
Confidence 766433322 123578999998888757778887889999998877554322 235789999998887
Q ss_pred EEEEEEeCCeEEEEecCCcceeEEecC------CCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEE----
Q psy9770 630 IIIVGCIAGRWLVMDSETREAYSIHTD------GNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGR---- 699 (811)
Q Consensus 630 ~la~g~~dg~i~i~d~~~~~~~~~~~~------~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~---- 699 (811)
+.+ |+. +.+.+||..+++....... ....|.++...++|++.+.. . +-|+.|+..++.. ....
T Consensus 465 lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~---~~~~~~~~ 537 (795)
T 4a2l_A 465 LWL-GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI---QKASILPV 537 (795)
T ss_dssp EEE-EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE---EECCCSCS
T ss_pred EEE-Eec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE---EEecCCCC
Confidence 554 444 4588999887654433211 23578999999999866654 4 4588999876521 1100
Q ss_pred ecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEe
Q psy9770 700 CTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCER 779 (811)
Q Consensus 700 ~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~ 779 (811)
-..+...|.++...++|.+.+... . -|..||..+++... .... .+-....|.++..
T Consensus 538 ~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~-~~~~---------------------~gl~~~~i~~i~~ 593 (795)
T 4a2l_A 538 SNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKR-YNTT---------------------NGLPNNVVYGILE 593 (795)
T ss_dssp CGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEE-ECGG---------------------GTCSCSCEEEEEE
T ss_pred CCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEE-eCCC---------------------CCCchhheEEEEE
Confidence 012345789999999998776554 3 58889987654221 1000 0112345888888
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCC
Q psy9770 780 SHDARVIATGDDFGKLKLYSYPAV 803 (811)
Q Consensus 780 s~dg~~Las~~~dg~v~vw~~~~~ 803 (811)
.++|++.+++. .| |..|+..+.
T Consensus 594 d~~g~lWi~t~-~G-l~~~~~~~~ 615 (795)
T 4a2l_A 594 DSFGRLWLSTN-RG-ISCFNPETE 615 (795)
T ss_dssp CTTSCEEEEET-TE-EEEEETTTT
T ss_pred CCCCCEEEEcC-Cc-eEEEcCCCC
Confidence 88898877663 34 666665543
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=1.3e-16 Score=187.20 Aligned_cols=333 Identities=10% Similarity=0.012 Sum_probs=208.7
Q ss_pred EeccCCCCeEEEEEcCCCcEEEEe--eccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEE---------EEEEe--
Q psy9770 294 HYLGHTDDIKCLSIHPNKLLIATG--QVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSIS---------CLSFS-- 360 (811)
Q Consensus 294 ~~~~h~~~V~~la~spdg~~Lasg--~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~---------~l~fs-- 360 (811)
.+.+|...|..++|++++.+++.. +.++ ...||....+.....+. .|...+. ...|+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~--------~~~l~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~S 87 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAG--------RATLVRRRADGAEESAL--PAPWNVRNRVFEYSGFPWAGVPR 87 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTT--------EEEEEEECTTSCEEESS--CTTCCBCCCGGGTCCCCEEEECC
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCC--------cEEEEEECCCCCcceeC--CCCccccccccccCCccceeeee
Confidence 466899999999999988777776 4455 88899865444455554 5655655 56666
Q ss_pred cCCCCcE-EEEEeCCCCceEEEEEcc--c-CCCcceEEEeee-----CCCcEEEEEecCCCCCeEEEECC----------
Q psy9770 361 KADGGTF-LCAVDEGNDYNISVWDWQ--K-SDRGHKITETKC-----SVDTVVAAEFHPLDRNNIVTCGK---------- 421 (811)
Q Consensus 361 ~~~dg~~-Lasv~~s~d~~i~vWd~~--~-~~~~~~~~~~~~-----~~~~V~~v~fsp~~~~ll~~~~d---------- 421 (811)
| ||++ |+.. ...+..|.+|++. . ++ ...+.. |...+..++|+|+++.+++++.+
T Consensus 88 P--Dg~~~la~~-~~~~~~l~~~~~~~~g~~~----~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 88 P--AGGPLLVFT-HFGDQRLYAFEPDAPGGAV----PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp S--SSSCEEEEE-BTTTCCEEEECTTSTTCCC----CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred c--CCCeEEEEE-ECCCCeEEEEcCCCCCCCC----CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 8 7887 7753 3446677777765 2 33 455555 56788999999999988888765
Q ss_pred CcEEEEEEcCC-----ceeeeecccccccC-CCCceEEEEEEcCCCc-EEEEcCC--------CcEEEEecC-Cc---eE
Q psy9770 422 SHINFWTIDAG-----GTLYKKQGIFEMIR-DKPKYVTCLAFTQGGE-VLSGDSN--------GNIIVWTRG-SN---TI 482 (811)
Q Consensus 422 ~~i~iwd~~~~-----~~~~~~~~~~~~l~-~~~~~v~~l~~s~~g~-llsg~~d--------g~I~vwd~~-~~---~~ 482 (811)
..|++|++.++ +..... . .+...+..++|+|||+ ++.++.+ ..|++||+. ++ +.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l-------~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~ 233 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVREL-------SDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADT 233 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEES-------SCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEE
T ss_pred eEEEEEECCCCccccCCceeEE-------EecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccccc
Confidence 57899998851 233222 2 3445788899999999 4444433 479999998 56 44
Q ss_pred EEEeecccccceEEEEEecCCcEEEEecCCC--cEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEE
Q psy9770 483 SKFIRNVHEGSVFSICVLKEGSIISAGGKDG--RLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILV 560 (811)
Q Consensus 483 ~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg--~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~ 560 (811)
..... .|...+..+.|+|||++++++..++ .|.+||+..+.. ..+..+...+....+.
T Consensus 234 ~~l~~-~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~---~~l~~~~~~~~~p~w~---------------- 293 (662)
T 3azo_A 234 RTLLG-GPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA---TQLCRREEEFAGPLWT---------------- 293 (662)
T ss_dssp EEEEE-ETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE---EESSCCSSBSSCCCCS----------------
T ss_pred EEeCC-CCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce---eecccccccccCcccc----------------
Confidence 44443 5678899999999999888888888 566666544433 1111111110000000
Q ss_pred EEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEE--eCCCCcEEEEecCCCCeEEEEEcCCCCEEEE--EEe
Q psy9770 561 GSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLW--DSMSHSVVWSKDIAEQAQSATFSPDGSIIIV--GCI 636 (811)
Q Consensus 561 ~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iw--d~~~~~~~~~~~~~~~v~~~~~spdg~~la~--g~~ 636 (811)
-.+..++|+|++.+++++.. +.++|| |+.+++......+...+..+ +++++..++. ++.
T Consensus 294 ---------------~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~ 356 (662)
T 3azo_A 294 ---------------PGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAAT-LTVSGTRAVGVAASP 356 (662)
T ss_dssp ---------------TTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEE-EEEETTEEEEEEEET
T ss_pred ---------------ccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEE-EecCCCEEEEEEcCC
Confidence 01345789999999999988 999999 66666643333344556655 1445554433 333
Q ss_pred CC--eEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEe
Q psy9770 637 AG--RWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEV 687 (811)
Q Consensus 637 dg--~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~ 687 (811)
+. .|.++|+.+++.......+...+....+++...+.+....+..|..|-+
T Consensus 357 ~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~ 409 (662)
T 3azo_A 357 RTAYEVVELDTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHIY 409 (662)
T ss_dssp TEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEEE
T ss_pred CCCCEEEEEECCCCceEEeecCCcccCCccccCcceEEEEEcCCCCEEEEEEE
Confidence 33 5667787777765544444333333333333333333323335655554
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.73 E-value=7.1e-16 Score=180.82 Aligned_cols=330 Identities=8% Similarity=-0.051 Sum_probs=203.1
Q ss_pred CccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEE---------EEEec--CCCCC-eE
Q psy9770 349 EFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVV---------AAEFH--PLDRN-NI 416 (811)
Q Consensus 349 ~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~---------~v~fs--p~~~~-ll 416 (811)
+|...|..++|++ ++.+++......++...||....+. ....+..+...+. ...|+ |+++. ++
T Consensus 21 ~~~~~~~~~~~s~--~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 21 SRSGRPACVGAVG--DEVWWVAPRPAEAGRATLVRRRADG---AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HTCSCCEEEEEET--TEEEEEEEETTTTTEEEEEEECTTS---CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred hcCCccceeEEcC--CeEEEEecCcccCCcEEEEEECCCC---CcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 6888999999998 5555554222668899999975554 5677777776665 56565 98888 66
Q ss_pred EEECCCcEEEEEEcCC----ceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCC----------CcEEEEecCC--
Q psy9770 417 VTCGKSHINFWTIDAG----GTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSN----------GNIIVWTRGS-- 479 (811)
Q Consensus 417 ~~~~d~~i~iwd~~~~----~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~d----------g~I~vwd~~~-- 479 (811)
++.. ....||.++.. .....+... .. ..+...+.+++|+|||+ +++++.+ ..|++||+.+
T Consensus 96 ~~~~-~~~~l~~~~~~~~g~~~~~~l~~~-~~-~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 172 (662)
T 3azo_A 96 FTHF-GDQRLYAFEPDAPGGAVPRPLTPV-SA-VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSA 172 (662)
T ss_dssp EEBT-TTCCEEEECTTSTTCCCCEECSCC-CC-STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTT
T ss_pred EEEC-CCCeEEEEcCCCCCCCCCEeccCC-cc-CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCc
Confidence 5544 34445555432 333222110 00 11456789999999998 5555555 5899999988
Q ss_pred ----ceEEEEeecccccceEEEEEecCCcEEEEecCCC--------cEEEEeCC-CCCccceeeeccccCCeEEEeeCCC
Q psy9770 480 ----NTISKFIRNVHEGSVFSICVLKEGSIISAGGKDG--------RLLQFDSN-LQPTGYEAQIAEHLGGIRTVSEGRG 546 (811)
Q Consensus 480 ----~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg--------~I~~wd~~-~~~~~~~~~~~~~~~~v~~l~~~~~ 546 (811)
++...... .+...+..++|+|||+.|+.++.++ .|++||+. .+...
T Consensus 173 ~~~~~~~~~l~~-~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~-------------------- 231 (662)
T 3azo_A 173 AADRSAVRELSD-DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFA-------------------- 231 (662)
T ss_dssp TTCGGGSEESSC-SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEE--------------------
T ss_pred cccCCceeEEEe-cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccc--------------------
Confidence 66544431 2446778899999999998776443 45555554 22100
Q ss_pred CeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCC--eEEEEeCCCCcEEEEecCCCC------
Q psy9770 547 SQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDR--IVQLWDSMSHSVVWSKDIAEQ------ 618 (811)
Q Consensus 547 ~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg--~v~iwd~~~~~~~~~~~~~~~------ 618 (811)
.......+|...+..++|+|||++++++..++ .|.+||+.+++..........
T Consensus 232 -------------------~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 232 -------------------DTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp -------------------EEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCC
T ss_pred -------------------ccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccc
Confidence 01122234567888999999999888887888 677777767765544332221
Q ss_pred ---eEEEEEcCCCCEEEEEEeCCeEEEE--ecCCcceeEEecCCCCCeEEE-EEccCCCEEEEEecCCcEEEE--EecCC
Q psy9770 619 ---AQSATFSPDGSIIIVGCIAGRWLVM--DSETREAYSIHTDGNEPIQVV-KFSPDGKLLALGSRDNYIYVY--EVSGD 690 (811)
Q Consensus 619 ---v~~~~~spdg~~la~g~~dg~i~i~--d~~~~~~~~~~~~~~~~i~~i-~~spdg~~lasgs~dg~I~iw--d~~~~ 690 (811)
+..++|+|++++++++.. +.++|| |+.+++ +..+..+...+..+ .++.+.-++++++.+....|| |+.++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred cccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 567899999999999988 988888 655555 56677777777766 443333334444555444555 54454
Q ss_pred CcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEE
Q psy9770 691 SRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWN 732 (811)
Q Consensus 691 ~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd 732 (811)
. ...+ ...|...+....+.+...+.+.+..+..|..|-
T Consensus 371 ~--~~~l--~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~ 408 (662)
T 3azo_A 371 R--ARTI--GARHTDPVDPAYYPEPQIRTFTAPDGREIHAHI 408 (662)
T ss_dssp C--EEEE--ESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEE
T ss_pred c--eEEe--ecCCcccCCccccCcceEEEEEcCCCCEEEEEE
Confidence 2 2221 233433343334444444444443344565554
No 174
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.72 E-value=4.8e-14 Score=159.54 Aligned_cols=330 Identities=12% Similarity=0.060 Sum_probs=230.1
Q ss_pred cCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcc--
Q psy9770 308 HPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQ-- 385 (811)
Q Consensus 308 spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~-- 385 (811)
+|.+.++++...++ .|.++|..+++.+.++.. ...+..+.|+| ||++|++ ++.++.|.+||+.
T Consensus 164 d~~~~~~V~~~~~~--------~V~viD~~t~~v~~~i~~---g~~p~~v~~Sp--DGr~lyv--~~~dg~V~viD~~~~ 228 (567)
T 1qks_A 164 DLENLFSVTLRDAG--------QIALIDGSTYEIKTVLDT---GYAVHISRLSA--SGRYLFV--IGRDGKVNMIDLWMK 228 (567)
T ss_dssp CGGGEEEEEETTTT--------EEEEEETTTCCEEEEEEC---SSCEEEEEECT--TSCEEEE--EETTSEEEEEETTSS
T ss_pred CCCceEEEEeCCCC--------eEEEEECCCCeEEEEEeC---CCCccceEECC--CCCEEEE--EcCCCeEEEEECCCC
Confidence 34555666776677 999999999999998863 23567999999 8999887 4678999999996
Q ss_pred cCCCcceEEEeeeCCCcEEEEEec----CCCCCeEEEEC-CCcEEEEEEcCCceeeeecccccccC---CCC-ceEEEEE
Q psy9770 386 KSDRGHKITETKCSVDTVVAAEFH----PLDRNNIVTCG-KSHINFWTIDAGGTLYKKQGIFEMIR---DKP-KYVTCLA 456 (811)
Q Consensus 386 ~~~~~~~~~~~~~~~~~V~~v~fs----p~~~~ll~~~~-d~~i~iwd~~~~~~~~~~~~~~~~l~---~~~-~~v~~l~ 456 (811)
+.+ .+.++.... ....++|+ |+++++++++. .+.|.++|..+.+.+......-.... .|+ ..+..+.
T Consensus 229 t~~---~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~ 304 (567)
T 1qks_A 229 EPT---TVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAIL 304 (567)
T ss_dssp SCC---EEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEE
T ss_pred CCc---EeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEE
Confidence 666 677776544 46799999 68888888877 58999999887665544321100000 011 2577888
Q ss_pred EcCCCc--EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEec-CCCcEEEEeCCCCCccceeee-c
Q psy9770 457 FTQGGE--VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGG-KDGRLLQFDSNLQPTGYEAQI-A 532 (811)
Q Consensus 457 ~s~~g~--llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s-~dg~I~~wd~~~~~~~~~~~~-~ 532 (811)
.++++. ++....+|.|.++|....................+.|+++|++|+++. .++.|.++|+.+++......+ .
T Consensus 305 ~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg 384 (567)
T 1qks_A 305 ASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGG 384 (567)
T ss_dssp ECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred EcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccC
Confidence 898876 346677899999998765433322213445577889999999876554 578999999998876433333 2
Q ss_pred --cccCCeEEEeeCCC-CeEEEEe--CCCeEEEEEccCC--------ceeeeeecccceEEEEECCCCCeEEEEEC----
Q psy9770 533 --EHLGGIRTVSEGRG-SQLIVGT--TRNCILVGSLNLG--------FSPVVLGHTDELWALAAHPSLSQFLTAGF---- 595 (811)
Q Consensus 533 --~~~~~v~~l~~~~~-~~l~~~~--~~~~i~~~d~~~~--------~~~~~~~h~~~v~~l~~sp~~~~l~s~s~---- 595 (811)
.|.+.-..+ +.|+ +.+++.. .++.|.+++.... ....+......-..+.++|+++++.....
T Consensus 385 ~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~ 463 (567)
T 1qks_A 385 QTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPE 463 (567)
T ss_dssp SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSS
T ss_pred cCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCC
Confidence 122212222 4554 6666544 3579999998762 22333333333345778999998888663
Q ss_pred ---CCeEEEEeCCCC-----cEE-EEec---------CCCCeEEEEEcCCCCEEEEEEe-----CCeEEEEecCCcceeE
Q psy9770 596 ---DRIVQLWDSMSH-----SVV-WSKD---------IAEQAQSATFSPDGSIIIVGCI-----AGRWLVMDSETREAYS 652 (811)
Q Consensus 596 ---dg~v~iwd~~~~-----~~~-~~~~---------~~~~v~~~~~spdg~~la~g~~-----dg~i~i~d~~~~~~~~ 652 (811)
.+.|.++|+.+. ... ..+. ....+..+.|+|+|+++.++.. ++.|.|+|.++++++.
T Consensus 464 ~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 464 AEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp HHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred cccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEE
Confidence 359999998866 211 2221 2457899999999999888754 6899999999999998
Q ss_pred EecCC
Q psy9770 653 IHTDG 657 (811)
Q Consensus 653 ~~~~~ 657 (811)
.++..
T Consensus 544 ~i~~~ 548 (567)
T 1qks_A 544 VIKDE 548 (567)
T ss_dssp EECCT
T ss_pred EeCCC
Confidence 88753
No 175
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.71 E-value=3e-14 Score=161.21 Aligned_cols=324 Identities=11% Similarity=0.051 Sum_probs=224.0
Q ss_pred CcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEc--CCceeeeecccc
Q psy9770 365 GTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTID--AGGTLYKKQGIF 442 (811)
Q Consensus 365 g~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~--~~~~~~~~~~~~ 442 (811)
+.++++ ...++.|.++|..+++ .+..+... ..+..+.|+|+++++++++.++.|.+||+. +.+.+....
T Consensus 167 ~~~~V~--~~~~~~V~viD~~t~~---v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~--- 237 (567)
T 1qks_A 167 NLFSVT--LRDAGQIALIDGSTYE---IKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK--- 237 (567)
T ss_dssp GEEEEE--ETTTTEEEEEETTTCC---EEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE---
T ss_pred ceEEEE--eCCCCeEEEEECCCCe---EEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe---
Confidence 344444 6889999999999998 77777644 356789999999999998889999999995 555444321
Q ss_pred cccCCCCceEEEEEEc----CCCcE-E-EEcCCCcEEEEecCCceEEEEeecc---------ccc-ceEEEEEecCCc-E
Q psy9770 443 EMIRDKPKYVTCLAFT----QGGEV-L-SGDSNGNIIVWTRGSNTISKFIRNV---------HEG-SVFSICVLKEGS-I 505 (811)
Q Consensus 443 ~~l~~~~~~v~~l~~s----~~g~l-l-sg~~dg~I~vwd~~~~~~~~~~~~~---------h~~-~V~~l~~s~dg~-~ 505 (811)
. ......++|+ |||++ + +...++.|.++|..+.+.+..+... |.. .+..+.+++++. +
T Consensus 238 ----~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~ 312 (567)
T 1qks_A 238 ----I-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEF 312 (567)
T ss_dssp ----C-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEE
T ss_pred ----c-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEE
Confidence 1 1236789999 69983 3 5556799999999999888876521 112 577788887654 4
Q ss_pred EEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECC
Q psy9770 506 ISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHP 585 (811)
Q Consensus 506 l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp 585 (811)
++....+|.|.++|........ +. .........++.|+|
T Consensus 313 vv~~~~~g~v~~vd~~~~~~~~----------v~-------------------------------~i~~~~~~~d~~~~p 351 (567)
T 1qks_A 313 IVNVKETGKILLVDYTDLNNLK----------TT-------------------------------EISAERFLHDGGLDG 351 (567)
T ss_dssp EEEETTTTEEEEEETTCSSEEE----------EE-------------------------------EEECCSSEEEEEECT
T ss_pred EEEecCCCeEEEEecCCCccce----------ee-------------------------------eeeccccccCceECC
Confidence 4445566888888875432100 00 001223455788999
Q ss_pred CCCeEEEEE-CCCeEEEEeCCCCcEEEEecC-CC---CeEEEE-EcCCCCEEEEEE--eCCeEEEEecCC-------cce
Q psy9770 586 SLSQFLTAG-FDRIVQLWDSMSHSVVWSKDI-AE---QAQSAT-FSPDGSIIIVGC--IAGRWLVMDSET-------REA 650 (811)
Q Consensus 586 ~~~~l~s~s-~dg~v~iwd~~~~~~~~~~~~-~~---~v~~~~-~spdg~~la~g~--~dg~i~i~d~~~-------~~~ 650 (811)
++++|+++. .++.|.++|+.+++.+..... .. +...+. ++|++..+.+.. .++.|.++|..+ .+.
T Consensus 352 dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kv 431 (567)
T 1qks_A 352 SHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKI 431 (567)
T ss_dssp TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEE
Confidence 999887766 578999999999988776544 21 111222 588855554433 358999999987 567
Q ss_pred eEEecCCCCCeEEEEEccCCCEEEEEec-------CCcEEEEEecCC-----CcceeEEEE-----ecCCCCCeeEEEeC
Q psy9770 651 YSIHTDGNEPIQVVKFSPDGKLLALGSR-------DNYIYVYEVSGD-----SRKYSRVGR-----CTGHSSFITHLDWS 713 (811)
Q Consensus 651 ~~~~~~~~~~i~~i~~spdg~~lasgs~-------dg~I~iwd~~~~-----~~~~~~~~~-----~~~h~~~V~~l~~s 713 (811)
+..+......-..+.++||+++|.+... .+.|.+||+.+. ...++.+.. +......+..+.|+
T Consensus 432 v~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (567)
T 1qks_A 432 LDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFN 511 (567)
T ss_dssp EEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEEC
T ss_pred EEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeEC
Confidence 7777754433345789999999998653 358999999875 222233211 11124578899999
Q ss_pred CCCCeEEEec-----CCceEEEEECCCCcccCCCC
Q psy9770 714 EDSMYIRSNS-----GDYELLYWNAGTCRQIPQSS 743 (811)
Q Consensus 714 pdg~~L~s~s-----~Dg~i~iWd~~~~~~~~~~~ 743 (811)
|+|+++..+. .++.|.++|.++++++..+.
T Consensus 512 ~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 512 KDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp TTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred CCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 9999876652 37899999999998776554
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=8.5e-15 Score=155.59 Aligned_cols=239 Identities=12% Similarity=0.094 Sum_probs=184.1
Q ss_pred CceEEEEEEcCCCcEE-EEcCC------------------------CcEEEEecCCceEEEEeecccccceEEEEEecCC
Q psy9770 449 PKYVTCLAFTQGGEVL-SGDSN------------------------GNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEG 503 (811)
Q Consensus 449 ~~~v~~l~~s~~g~ll-sg~~d------------------------g~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg 503 (811)
-..+.+++++++|+++ +...+ +.|.+||..+++....+...+-.....++++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3569999999999966 44444 3799999998888776654555678999999999
Q ss_pred cEEEEecCCCcEEEEeCCCCCccceeee---------ccccCCeEEEeeCC-CCeEEEEe--CCCeEEEEEccCCceeee
Q psy9770 504 SIISAGGKDGRLLQFDSNLQPTGYEAQI---------AEHLGGIRTVSEGR-GSQLIVGT--TRNCILVGSLNLGFSPVV 571 (811)
Q Consensus 504 ~~l~s~s~dg~I~~wd~~~~~~~~~~~~---------~~~~~~v~~l~~~~-~~~l~~~~--~~~~i~~~d~~~~~~~~~ 571 (811)
+++++...++.|++||.+.... ....+ ..+......+++++ ++.++++. .++.|++|+........+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEe
Confidence 9999888899999999875521 12222 23445688999998 78888776 478999999665554444
Q ss_pred ee----------cccceEEEEECCC-CCeEEEEECCCeEEEEeCCCCcEEEEec---CCCCeEEEEEcCCCCEEEEE---
Q psy9770 572 LG----------HTDELWALAAHPS-LSQFLTAGFDRIVQLWDSMSHSVVWSKD---IAEQAQSATFSPDGSIIIVG--- 634 (811)
Q Consensus 572 ~~----------h~~~v~~l~~sp~-~~~l~s~s~dg~v~iwd~~~~~~~~~~~---~~~~v~~~~~spdg~~la~g--- 634 (811)
.. +.....+++++|+ +.++++...++.|++||..+++.+..+. ....+..++|+| +..++..
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~ 260 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP 260 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence 32 2234889999998 7777777788999999999888887763 446788999999 4333332
Q ss_pred ----EeCCeEEEEecCCcceeEEec---CCCCCeEEEEEccCCCEEEEEecCCcEEEEEecC
Q psy9770 635 ----CIAGRWLVMDSETREAYSIHT---DGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSG 689 (811)
Q Consensus 635 ----~~dg~i~i~d~~~~~~~~~~~---~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~ 689 (811)
..+..|++||..+++.+..+. .+......|+++|||.++++...++.|++|++..
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 234589999999999988874 5667789999999998888888899999999875
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.70 E-value=7e-15 Score=152.79 Aligned_cols=242 Identities=14% Similarity=0.149 Sum_probs=177.2
Q ss_pred cccCCeEEEeeCCCCeEEEE-eCCCeEEEEEccCCceeeee------ecccceEEEEE-CCCCCeEEEEEC-CCeEEEEe
Q psy9770 533 EHLGGIRTVSEGRGSQLIVG-TTRNCILVGSLNLGFSPVVL------GHTDELWALAA-HPSLSQFLTAGF-DRIVQLWD 603 (811)
Q Consensus 533 ~~~~~v~~l~~~~~~~l~~~-~~~~~i~~~d~~~~~~~~~~------~h~~~v~~l~~-sp~~~~l~s~s~-dg~v~iwd 603 (811)
++......+++++++.++++ ..++.|.+||........+. ++...+.++++ .+++.++++... ++.|.+||
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 34456788999888887776 56789999998865444332 23457889999 567766666543 88999999
Q ss_pred CCCCcEEEEecC--CCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEec--CCCCCeEEEEEccCCCEEEEEecC
Q psy9770 604 SMSHSVVWSKDI--AEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHT--DGNEPIQVVKFSPDGKLLALGSRD 679 (811)
Q Consensus 604 ~~~~~~~~~~~~--~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~i~~spdg~~lasgs~d 679 (811)
.+++.+..+.. ...+..++++|+|+++++...++.|.+||.. ++.+..+. .+...+..++++++|+++++...+
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 184 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA 184 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC
Confidence 56666665533 3578999999999987777778999999964 55555553 344568999999999988887778
Q ss_pred CcEEEEEecCCCcceeEEEEecC--CCCCeeEEEeCCCCCeEEEecCCc-eEEEEECCCCcccCCCCCccceeEecccee
Q psy9770 680 NYIYVYEVSGDSRKYSRVGRCTG--HSSFITHLDWSEDSMYIRSNSGDY-ELLYWNAGTCRQIPQSSQLRDVVWESNSCT 756 (811)
Q Consensus 680 g~I~iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~spdg~~L~s~s~Dg-~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~ 756 (811)
+.|++|+... ..+..+.. +...+..++++++|+++++...++ .|.+|+.. ++.+..+..
T Consensus 185 ~~i~~~~~~g-----~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~------------ 246 (286)
T 1q7f_A 185 HCVKVFNYEG-----QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALES------------ 246 (286)
T ss_dssp TEEEEEETTC-----CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEE------------
T ss_pred CEEEEEcCCC-----CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcc------------
Confidence 9999999754 23334433 346789999999999998888776 99999954 443322110
Q ss_pred eccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q psy9770 757 LTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQPK 806 (811)
Q Consensus 757 ~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~~ 806 (811)
......+.+++++|+|+++++ +.|+.|++|++....+.
T Consensus 247 -----------~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~pv 284 (286)
T 1q7f_A 247 -----------KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAPV 284 (286)
T ss_dssp -----------SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCCT
T ss_pred -----------cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccccc
Confidence 111234678999999988877 56899999999877665
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.70 E-value=4.2e-15 Score=159.14 Aligned_cols=268 Identities=14% Similarity=0.113 Sum_probs=179.6
Q ss_pred cceEEccCCcEEEEe-----------ccEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEE
Q psy9770 264 SNLYLLPTGEIVYFV-----------AAVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIR 332 (811)
Q Consensus 264 ~~l~~spdg~~l~~~-----------~~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~ 332 (811)
..+.+ ||+.+++. .+.|.+||+.+++.+.+ ..+.+++|||||++||.++.++ ......|.
T Consensus 18 ~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~---~~~~~~l~ 88 (347)
T 2gop_A 18 SDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANE---EKKVSEIW 88 (347)
T ss_dssp EEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEET---TTTEEEEE
T ss_pred ccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEecc---CCCcceEE
Confidence 34566 88877664 35799999999877666 5789999999999999887542 01123689
Q ss_pred EEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCC-------------------------CCceEEEEEcccC
Q psy9770 333 IWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEG-------------------------NDYNISVWDWQKS 387 (811)
Q Consensus 333 iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s-------------------------~d~~i~vWd~~~~ 387 (811)
+||+.+++...... +.. +..++|+| ||+.|+..... ....|.+||+.++
T Consensus 89 ~~~~~~g~~~~l~~---~~~-~~~~~wsp--dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 89 VADLETLSSKKILE---AKN-IRSLEWNE--DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEETTTTEEEEEEE---ESE-EEEEEECT--TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred EEECCCCceEEEEc---CCC-ccceeECC--CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 99999888776654 233 99999999 89988875311 1368999999887
Q ss_pred CCcceEEEeeeCCCcEEEEEecCCCCCeEEEE-CC------C-cEEEEEEcCCceeeeecccccccCCCCceEEEEEEcC
Q psy9770 388 DRGHKITETKCSVDTVVAAEFHPLDRNNIVTC-GK------S-HINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQ 459 (811)
Q Consensus 388 ~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~-~d------~-~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~ 459 (811)
+ .+..+.. . .+..+.|+|++ +++++ .+ . ...+|.++ .+....... + ..+..+ +|
T Consensus 163 ~---~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~-------~-~~~~~~--sp 224 (347)
T 2gop_A 163 E---VIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKMFE-------K-VSFYAV--DS 224 (347)
T ss_dssp E---EEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEEEE-------E-ESEEEE--EE
T ss_pred e---EEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC-CCceEEecc-------C-cceeeE--CC
Confidence 6 4355554 3 78899999987 54444 33 2 45677666 444333221 1 224443 89
Q ss_pred CCc-EEEEcCC--------CcEEEEecCCceEEEEeecccccceEE-EEEecCCcEEEEecCCCcEEEEeCCCCCcccee
Q psy9770 460 GGE-VLSGDSN--------GNIIVWTRGSNTISKFIRNVHEGSVFS-ICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEA 529 (811)
Q Consensus 460 ~g~-llsg~~d--------g~I~vwd~~~~~~~~~~~~~h~~~V~~-l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~ 529 (811)
+|+ ++.++.+ ..|++|| +++...... .|...+.. +.|+ ++ ++++++.++.+++| +..+.. .
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~-~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~---~ 295 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD-EVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI---K 295 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST-TCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE---E
T ss_pred CCCEEEEEEccccCCccccceEEEEC--CCceEeccc-cCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce---E
Confidence 998 5444432 4788888 565544444 66778886 8999 88 88889999999999 873322 3
Q ss_pred eeccccCCeEEEeeCCCCeEEEEeCCCeE-EEEEccCCceeeeeecc
Q psy9770 530 QIAEHLGGIRTVSEGRGSQLIVGTTRNCI-LVGSLNLGFSPVVLGHT 575 (811)
Q Consensus 530 ~~~~~~~~v~~l~~~~~~~l~~~~~~~~i-~~~d~~~~~~~~~~~h~ 575 (811)
.+..+...+..+++++ ..++++...+.. .+|.++ +....+..|.
T Consensus 296 ~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~-g~~~~lt~~n 340 (347)
T 2gop_A 296 PIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD-GEEKQLTDYN 340 (347)
T ss_dssp EEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES-SSEEECCCTT
T ss_pred EEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC-CcEEEecccc
Confidence 3334467788899988 666666666543 555544 4334444443
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.70 E-value=1.2e-14 Score=150.88 Aligned_cols=239 Identities=13% Similarity=0.074 Sum_probs=177.0
Q ss_pred ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeee----ccccCCeEEEee-CCCCeEEEEeC--CCeEEEE
Q psy9770 489 VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQI----AEHLGGIRTVSE-GRGSQLIVGTT--RNCILVG 561 (811)
Q Consensus 489 ~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~----~~~~~~v~~l~~-~~~~~l~~~~~--~~~i~~~ 561 (811)
++-..+.+++++++|+++++...++.|.+||.+.... ..... ..+...+..+++ .+++.++++.. ++.|++|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~-~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFK-FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEE-EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEE-EEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 4556789999999999988888899999999874332 11111 123456788888 67888888874 7899999
Q ss_pred EccCCceeeee-ecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEec---CCCCeEEEEEcCCCCEEEEEEeC
Q psy9770 562 SLNLGFSPVVL-GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKD---IAEQAQSATFSPDGSIIIVGCIA 637 (811)
Q Consensus 562 d~~~~~~~~~~-~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~---~~~~v~~~~~spdg~~la~g~~d 637 (811)
+........+. .+...+.+++++|+++++++...++.|.+||.. ++.+..+. ....+..++++++|+++++...+
T Consensus 106 d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 184 (286)
T 1q7f_A 106 NQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA 184 (286)
T ss_dssp CTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred CCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC
Confidence 96554443332 334578999999999988887788999999964 55555543 33568999999999977777778
Q ss_pred CeEEEEecCCcceeEEecCC--CCCeEEEEEccCCCEEEEEecCC-cEEEEEecCCCcceeEEEEecCC--CCCeeEEEe
Q psy9770 638 GRWLVMDSETREAYSIHTDG--NEPIQVVKFSPDGKLLALGSRDN-YIYVYEVSGDSRKYSRVGRCTGH--SSFITHLDW 712 (811)
Q Consensus 638 g~i~i~d~~~~~~~~~~~~~--~~~i~~i~~spdg~~lasgs~dg-~I~iwd~~~~~~~~~~~~~~~~h--~~~V~~l~~ 712 (811)
+.|++||.. ++.+..+..+ ...+..++++++|+++++...++ .|++|+... +.+..+..+ ...+.+++|
T Consensus 185 ~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-----~~~~~~~~~~~~~~~~~i~~ 258 (286)
T 1q7f_A 185 HCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-----QLISALESKVKHAQCFDVAL 258 (286)
T ss_dssp TEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-----CEEEEEEESSCCSCEEEEEE
T ss_pred CEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-----CEEEEEcccCCCCcceeEEE
Confidence 999999974 5556666433 35788999999999888887776 999999543 223333333 334789999
Q ss_pred CCCCCeEEEecCCceEEEEECCCC
Q psy9770 713 SEDSMYIRSNSGDYELLYWNAGTC 736 (811)
Q Consensus 713 spdg~~L~s~s~Dg~i~iWd~~~~ 736 (811)
+|+|+++++ +.|+.|++|++...
T Consensus 259 ~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 259 MDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCCCcEEEE-CCCCeEEEEEcccc
Confidence 999987777 57999999998653
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=8e-15 Score=156.02 Aligned_cols=268 Identities=12% Similarity=0.067 Sum_probs=192.4
Q ss_pred CcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEE-EEcCCCcEEEEecCC
Q psy9770 401 DTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVL-SGDSNGNIIVWTRGS 479 (811)
Q Consensus 401 ~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~ll-sg~~dg~I~vwd~~~ 479 (811)
..|.++.|+++...++....++.++.|. +...... ..+...+.+++|+++|+++ ++..++.|.+||..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~ 75 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLEI-------SKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET 75 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEE-------ESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred cccceeeecCCccceeEEeecccCcccc---cceeEEE-------eccCccccCcEECCCCCEEEEECCCCEEEEEeCCC
Confidence 4567788998777666666788888882 3333333 2233457899999999965 678889999999998
Q ss_pred ceEEEEeecccccceEEEEEecCCcEEEEecCC----CcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCC
Q psy9770 480 NTISKFIRNVHEGSVFSICVLKEGSIISAGGKD----GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTR 555 (811)
Q Consensus 480 ~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~d----g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~ 555 (811)
++...... .+...+.+++++++|+++++...+ +.|.+||.+................+..+++++++.+++++..
T Consensus 76 ~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 76 KEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp CCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred CcEEEEee-CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecc
Confidence 87766553 466789999999999988876666 6899999987765211111123456888999999999888763
Q ss_pred -------CeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEE-ECCCeEEEEeCCC-CcEEEE------ecCC--CC
Q psy9770 556 -------NCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTA-GFDRIVQLWDSMS-HSVVWS------KDIA--EQ 618 (811)
Q Consensus 556 -------~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~-s~dg~v~iwd~~~-~~~~~~------~~~~--~~ 618 (811)
+.|+.++..++....+..+...+..++|+|+++.|+.+ ..++.|.+||+.+ +..+.. .... ..
T Consensus 155 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~ 234 (333)
T 2dg1_A 155 GYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEG 234 (333)
T ss_dssp CBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSE
T ss_pred ccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCC
Confidence 56777777665444444445568899999999866544 4578999999863 332211 1112 36
Q ss_pred eEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCC------CeEEEEEccCCCEEEEEecCC
Q psy9770 619 AQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNE------PIQVVKFSPDGKLLALGSRDN 680 (811)
Q Consensus 619 v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~------~i~~i~~spdg~~lasgs~dg 680 (811)
+..++++++|+++++...++.|.+||. +++.+..+..+.. .+.+++|+||++.|++++.++
T Consensus 235 ~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 235 PDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 788999999998877777899999998 4666666654433 688999999988777666553
No 181
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=6.5e-15 Score=156.49 Aligned_cols=238 Identities=13% Similarity=0.110 Sum_probs=179.3
Q ss_pred ccceEEEEEecCCcEEEEecCC------------------------CcEEEEeCCCCCccceeeeccccCCeEEEeeCCC
Q psy9770 491 EGSVFSICVLKEGSIISAGGKD------------------------GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRG 546 (811)
Q Consensus 491 ~~~V~~l~~s~dg~~l~s~s~d------------------------g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~ 546 (811)
-+.+.+++++++|+++++...+ +.|.+||..++.. ....-..+......++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI-LQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE-EEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE-EeccCCCccCCceEEEECCC
Confidence 4578999999999999877776 4799999987766 22222244557889999998
Q ss_pred CeEEEEe-CCCeEEEEEccCC--ceeee---------eecccceEEEEECC-CCCeEEEEE-CCCeEEEEeCCCCcEEEE
Q psy9770 547 SQLIVGT-TRNCILVGSLNLG--FSPVV---------LGHTDELWALAAHP-SLSQFLTAG-FDRIVQLWDSMSHSVVWS 612 (811)
Q Consensus 547 ~~l~~~~-~~~~i~~~d~~~~--~~~~~---------~~h~~~v~~l~~sp-~~~~l~s~s-~dg~v~iwd~~~~~~~~~ 612 (811)
+.++++. .++.|++|+.... ....+ .++.....+++++| ++.++++.+ .++.|++|| .+++.+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 8877765 4679999998765 33333 23445789999999 788888876 689999999 56666665
Q ss_pred ecCC-----------CCeEEEEEcCC-CCEEEEEEeCCeEEEEecCCcceeEEec--CCCCCeEEEEEccCCCEEEE---
Q psy9770 613 KDIA-----------EQAQSATFSPD-GSIIIVGCIAGRWLVMDSETREAYSIHT--DGNEPIQVVKFSPDGKLLAL--- 675 (811)
Q Consensus 613 ~~~~-----------~~v~~~~~spd-g~~la~g~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~i~~spdg~~las--- 675 (811)
+... ..+..++++|+ |.++++...++.|++||..+++.+..+. .+...+..++|+| +..+++
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~ 259 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGK 259 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCC
Confidence 5321 23889999999 6666777778899999999898888774 4556788999999 433333
Q ss_pred ----EecCCcEEEEEecCCCcceeEEEEe---cCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCC
Q psy9770 676 ----GSRDNYIYVYEVSGDSRKYSRVGRC---TGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 676 ----gs~dg~I~iwd~~~~~~~~~~~~~~---~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
...+..|++|++.++ +.+..+ .++...+..|+++|+|.++++...++.|++|++..
T Consensus 260 ~~v~~~~~~~v~~~~~~~g----~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSG----EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCTTCSCCCCEEEEETTTC----CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCC----eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 334458999998886 344444 46777899999999998888888999999999864
No 182
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.69 E-value=5.6e-12 Score=150.65 Aligned_cols=440 Identities=10% Similarity=0.057 Sum_probs=289.5
Q ss_pred ccceEEccCCcEEEEeccEEEEEeCCCCceEEecc-C-CCC-eEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCC
Q psy9770 263 RSNLYLLPTGEIVYFVAAVAVLYNVEEQTQRHYLG-H-TDD-IKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSL 339 (811)
Q Consensus 263 ~~~l~~spdg~~l~~~~~~i~i~d~~~~~~~~~~~-h-~~~-V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~ 339 (811)
+..+...++|.+.+...+.|.+||..+++...+.. + ... |.++...+++.+.+ |..++ -|..||..++
T Consensus 133 i~~i~~d~~g~lwi~t~~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~--------Gl~~~~~~~~ 203 (795)
T 4a2l_A 133 VNGIEEISPEQLLISTPEGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTD--------GLYTYSITQK 203 (795)
T ss_dssp CCEEEEEETTEEEEEETTEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEE-EESSS--------CEEEEETTTC
T ss_pred EEEEEECCCCCEEEEECCceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEE-EECCC--------CEEEEeCCCC
Confidence 45677778888777666779999988765443321 1 123 89999998987666 44433 3889998877
Q ss_pred cEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeee--------CCCcEEEEEecCC
Q psy9770 340 FTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKC--------SVDTVVAAEFHPL 411 (811)
Q Consensus 340 ~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~--------~~~~V~~v~fsp~ 411 (811)
+...... ......|.++...+ +|.+.+. ..++-|.+||..+++ +..+.. ....|.++...++
T Consensus 204 ~~~~~~~-~~~~~~i~~i~~d~--~g~lwig---t~~~Gl~~~~~~~~~----~~~~~~~~~~~~~l~~~~i~~i~~d~~ 273 (795)
T 4a2l_A 204 TFEKVIP-ILGTKQIQAILQQS--PTRIWVA---TEGAGLFLINPKTKE----IKNYLHSPSNPKSISSNYIRSLAMDSQ 273 (795)
T ss_dssp CEEECC-----CCCEEEEEEEE--TTEEEEE---EBSSCEEEEETTTTE----EEEECCCTTCTTSCSCSBEEEEEECTT
T ss_pred eEEEecC-CCCCCeeEEEEEcC--CCCEEEE---ECCCCeEEEeCCCCe----EEEeecCCCCccccCCCeEEEEEEcCC
Confidence 6554321 12356788888887 7777765 334448889987764 333321 2356899988874
Q ss_pred CCCeEEEECCCcEEEEEEcCCceeeeecccc-cccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEee---
Q psy9770 412 DRNNIVTCGKSHINFWTIDAGGTLYKKQGIF-EMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIR--- 487 (811)
Q Consensus 412 ~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~-~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~--- 487 (811)
+.+.+++.+ .|.+|+..++ .+....... ....-....|.++...++|.+..|+.++-|..|+..++.......
T Consensus 274 -g~lWigt~~-Gl~~~~~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~ 350 (795)
T 4a2l_A 274 -NRLWIGTFN-DLNIYHEGTD-SFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPY 350 (795)
T ss_dssp -SCEEEEESS-CEEEEETTTT-EEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTT
T ss_pred -CCEEEEeCC-hhheEcCCCC-eEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCC
Confidence 455555555 6888887643 332221110 000112356999999999999899998999999987655433211
Q ss_pred --cccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeec------cccCCeEEEeeCCCCe-EEEEeCCCeE
Q psy9770 488 --NVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIA------EHLGGIRTVSEGRGSQ-LIVGTTRNCI 558 (811)
Q Consensus 488 --~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~------~~~~~v~~l~~~~~~~-l~~~~~~~~i 558 (811)
......|.+++..++|.+.+ |+.++-|..|+............. -....|.++...+++. +.+|+.++.|
T Consensus 351 ~~~l~~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl 429 (795)
T 4a2l_A 351 KNSLSDNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGL 429 (795)
T ss_dssp SSSCSCSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEE
T ss_pred CCCCCCCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCce
Confidence 01245699999998888776 777878999998766541111100 1235688998888888 9999998899
Q ss_pred EEEEccCCceeeee-----ecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEec-------CCCCeEEEEEcC
Q psy9770 559 LVGSLNLGFSPVVL-----GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKD-------IAEQAQSATFSP 626 (811)
Q Consensus 559 ~~~d~~~~~~~~~~-----~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-------~~~~v~~~~~sp 626 (811)
..++..++....+. .....|.++...+++.+.+. +. +-|.+||..+++...... ....|.++...+
T Consensus 430 ~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 507 (795)
T 4a2l_A 430 SILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG-TL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS 507 (795)
T ss_dssp EEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE-ES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT
T ss_pred eEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE-ec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECC
Confidence 99998876544332 23457899999888875554 44 458889988776544321 125689999999
Q ss_pred CCCEEEEEEeCCeEEEEecCCcceeEEec-------CCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEE
Q psy9770 627 DGSIIIVGCIAGRWLVMDSETREAYSIHT-------DGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGR 699 (811)
Q Consensus 627 dg~~la~g~~dg~i~i~d~~~~~~~~~~~-------~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~ 699 (811)
+|.+.+. +. +.+..||..+++. .+. .....|.++...++|.+.+.. .. -|..||..++ .+.....
T Consensus 508 ~g~lWig-t~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~--~~~~~~~ 579 (795)
T 4a2l_A 508 HKRLWIG-GE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDK--QIKRYNT 579 (795)
T ss_dssp TCCEEEE-ES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTT--EEEEECG
T ss_pred CCCEEEE-eC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCC--cEEEeCC
Confidence 9876554 44 5688899877655 222 123468899999999866544 44 5888887654 2222211
Q ss_pred ecCC-CCCeeEEEeCCCCCeEEEecCCceEEEEECCCCc
Q psy9770 700 CTGH-SSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCR 737 (811)
Q Consensus 700 ~~~h-~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~ 737 (811)
..+. ...|.++...++|.+.+++ ++-|..|+..+++
T Consensus 580 ~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~~ 616 (795)
T 4a2l_A 580 TNGLPNNVVYGILEDSFGRLWLST--NRGISCFNPETEK 616 (795)
T ss_dssp GGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTTE
T ss_pred CCCCchhheEEEEECCCCCEEEEc--CCceEEEcCCCCc
Confidence 2222 3468899999999887766 3457888987654
No 183
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=2.8e-11 Score=144.28 Aligned_cols=486 Identities=10% Similarity=0.044 Sum_probs=304.3
Q ss_pred ccceEEccCCc-EEEEecc-EEEEEeCCCCceEEeccC--------CCCeEEEEEcC--CCcEEEEee-ccCCCCCCCCC
Q psy9770 263 RSNLYLLPTGE-IVYFVAA-VAVLYNVEEQTQRHYLGH--------TDDIKCLSIHP--NKLLIATGQ-VAGHDAREGKP 329 (811)
Q Consensus 263 ~~~l~~spdg~-~l~~~~~-~i~i~d~~~~~~~~~~~h--------~~~V~~la~sp--dg~~Lasg~-~dg~~~~~~~~ 329 (811)
+..|...++|. +-+...+ .+..||..+.+...+... ...|.++.... +|.+.+ ++ ..|
T Consensus 68 I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi-~t~~~g-------- 138 (781)
T 3v9f_A 68 LNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWV-CTYYRG-------- 138 (781)
T ss_dssp EEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEE-EESSSC--------
T ss_pred cceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEE-EECCCC--------
Confidence 34566667787 5444444 799999988766555211 23699999988 776555 44 444
Q ss_pred eEEEEeCCCCcEEEEeccC---CccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEee--------e
Q psy9770 330 HIRIWNSVSLFTVSIIGIG---EFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETK--------C 398 (811)
Q Consensus 330 ~I~iWd~~t~~~~~~l~~~---~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~--------~ 398 (811)
|..||..+++........ .....|.++...+ +|.+.+. ..++-|..||..+++ +..+. .
T Consensus 139 -l~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~--~g~lwig---t~~~Gl~~~~~~~~~----~~~~~~~~~~~~~l 208 (781)
T 3v9f_A 139 -IEYLDIATGKFTHYNKSTVPALPSEQTWTATEAE--DGKLYIG---HVEGGLSILSLNDKS----VKHFVHDPQNPNSL 208 (781)
T ss_dssp -EEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEE--TTEEEEE---ETTTEEEEEETTTTE----EEEECC--------
T ss_pred -eeEEECCCCeEEeeccCcccCCCccceEEEEECC--CCCEEEE---ecCCCeEEEcCCCCc----eEeeecCCCCcccC
Confidence 889998876654431100 1235688888877 6777764 445458889987764 22221 1
Q ss_pred CCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeeccccc-ccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEec
Q psy9770 399 SVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFE-MIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTR 477 (811)
Q Consensus 399 ~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~-~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~ 477 (811)
....|.++...++ +.+.+++.. .+.+|+..++ .+........ ...-....|.++...++|.+..|+..+-|.++|.
T Consensus 209 ~~~~i~~i~~d~~-g~lwigt~~-Gl~~~d~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~ 285 (781)
T 3v9f_A 209 PGNDVRCIYKDTN-GNIWIGTSK-GLALFNANTE-TFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDL 285 (781)
T ss_dssp CCSSEEEEEECTT-CCEEEEETT-EEEEEETTTT-EEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEET
T ss_pred CCCceeEEEEcCC-CCEEEEeCC-cHheECCCCC-cEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECC
Confidence 2356888888774 456666555 6888887643 2222211000 0001235699999999999888888677999998
Q ss_pred CCceEEEEee-------------cccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceee-------eccccCC
Q psy9770 478 GSNTISKFIR-------------NVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ-------IAEHLGG 537 (811)
Q Consensus 478 ~~~~~~~~~~-------------~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~-------~~~~~~~ 537 (811)
.++....... ......|.++...++|.+-+ |+.++-|..++........... -......
T Consensus 286 ~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 364 (781)
T 3v9f_A 286 QQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWI-GTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKV 364 (781)
T ss_dssp TCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEE-EEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSC
T ss_pred CCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEE-EecCCeEEEeCCCCCcceeeccCccccccCCCCCcc
Confidence 7765432211 12345799999999887666 7777889999887655411110 0112356
Q ss_pred eEEEeeCCCCeEEEEeCCCeEEEEEccCCceeee----eecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe
Q psy9770 538 IRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVV----LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK 613 (811)
Q Consensus 538 v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~----~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 613 (811)
|.++...+++.+.+|+.++.|..++..+.....+ ......|.++...+++.+.+ |+.++-|..+|..+++.....
T Consensus 365 v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~ 443 (781)
T 3v9f_A 365 VSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIE 443 (781)
T ss_dssp EEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECC
T ss_pred eEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEec
Confidence 8999999999999999888899998765432222 12345789999887776544 677678999998877654332
Q ss_pred c---CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCC-----CCCeEEEEEccCCCEEEEEecCCcEEEE
Q psy9770 614 D---IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDG-----NEPIQVVKFSPDGKLLALGSRDNYIYVY 685 (811)
Q Consensus 614 ~---~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~-----~~~i~~i~~spdg~~lasgs~dg~I~iw 685 (811)
. ....|.++...++|. |.+|+. +.|..||..+++........ ...|.++...++|++.+. +.++-|..|
T Consensus 444 ~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~ 520 (781)
T 3v9f_A 444 LEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIY 520 (781)
T ss_dssp STTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEE
T ss_pred cCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEE
Confidence 1 245789999888886 445555 56889998876654433222 467899999999986654 443447778
Q ss_pred EecCCCcceeEEEEecC-CCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeee
Q psy9770 686 EVSGDSRKYSRVGRCTG-HSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGI 764 (811)
Q Consensus 686 d~~~~~~~~~~~~~~~~-h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 764 (811)
+..++ .+.......+ ....|.++...++|.+.+... +|.|..||..+++... +..
T Consensus 521 ~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~-~~~-------------------- 576 (781)
T 3v9f_A 521 TPDMQ--LVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQV-FQR-------------------- 576 (781)
T ss_dssp CTTCC--EEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEE-ECG--------------------
T ss_pred eCCCC--eEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEE-ccc--------------------
Confidence 76653 1111111111 245789999999998776654 7765888887654211 100
Q ss_pred CCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCC
Q psy9770 765 WPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPA 802 (811)
Q Consensus 765 ~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~ 802 (811)
..+-....|.++...++|++.+++ ..| |..|+..+
T Consensus 577 -~~gl~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~~~~ 611 (781)
T 3v9f_A 577 -KEGLPNTHIRAISEDKNGNIWAST-NTG-ISCYITSK 611 (781)
T ss_dssp -GGTCSCCCCCEEEECSSSCEEEEC-SSC-EEEEETTT
T ss_pred -cCCCCCceEEEEEECCCCCEEEEc-CCc-eEEEECCC
Confidence 001123457888888888877654 445 55565443
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=2.3e-14 Score=152.40 Aligned_cols=263 Identities=11% Similarity=0.025 Sum_probs=187.1
Q ss_pred eEEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCcccee
Q psy9770 451 YVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEA 529 (811)
Q Consensus 451 ~v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~ 529 (811)
.+.+++|++++. ++....++.++.| .++....+. .+...+.+++|+++|++++++..++.|.+||.+.+... .
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~--~ 80 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEIS-KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK--R 80 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEE-SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE--E
T ss_pred ccceeeecCCccceeEEeecccCccc---ccceeEEEe-ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE--E
Confidence 366788888877 3455778899999 344555555 56667899999999998888888999999999876651 1
Q ss_pred eeccccCCeEEEeeCCCCeEEEEeCCC-----eEEEEEccCCcee-eee--ecccceEEEEECCCCCeEEEEEC------
Q psy9770 530 QIAEHLGGIRTVSEGRGSQLIVGTTRN-----CILVGSLNLGFSP-VVL--GHTDELWALAAHPSLSQFLTAGF------ 595 (811)
Q Consensus 530 ~~~~~~~~v~~l~~~~~~~l~~~~~~~-----~i~~~d~~~~~~~-~~~--~h~~~v~~l~~sp~~~~l~s~s~------ 595 (811)
........+..+++++++.+++++..+ .|++||..++... .+. .+...+.+++++|+++++++...
T Consensus 81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 122345678999999999888877654 8999998877544 222 23457899999999987776653
Q ss_pred CCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecCC-cceeEE--------ecCCCCCeEEEE
Q psy9770 596 DRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSET-REAYSI--------HTDGNEPIQVVK 665 (811)
Q Consensus 596 dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~~-~~~~~~--------~~~~~~~i~~i~ 665 (811)
.+.|..+|..+++..........+..++|+|+|+.|+++. .++.|.+||+.+ +..+.. +.++ ..+..++
T Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~ 239 (333)
T 2dg1_A 161 LGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCC 239 (333)
T ss_dssp CEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEE
T ss_pred CceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceE
Confidence 3567777776655543333334578999999999776554 578999999863 332211 1222 4578899
Q ss_pred EccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCC------CCeeEEEeCCCCCeEEEecCC
Q psy9770 666 FSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHS------SFITHLDWSEDSMYIRSNSGD 725 (811)
Q Consensus 666 ~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~------~~V~~l~~spdg~~L~s~s~D 725 (811)
++++|+++++...++.|.+|+.. + +.+..+..+. ..+.+++|+||++.|+.++.+
T Consensus 240 ~d~~G~l~v~~~~~~~v~~~d~~-g----~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 240 IDSDDNLYVAMYGQGRVLVFNKR-G----YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EBTTCCEEEEEETTTEEEEECTT-S----CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ECCCCCEEEEEcCCCEEEEECCC-C----CEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 99999988887778899999874 3 2233333332 368999999998777655554
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.66 E-value=7.8e-13 Score=137.80 Aligned_cols=277 Identities=9% Similarity=-0.022 Sum_probs=197.8
Q ss_pred ceEEEEEEcCCCcEEEEc-CCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccce
Q psy9770 450 KYVTCLAFTQGGEVLSGD-SNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYE 528 (811)
Q Consensus 450 ~~v~~l~~s~~g~llsg~-~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~ 528 (811)
..+.++++.++|.++.+. .++.|.+||.. ++........+...+.++++.++|.++++...++.|..||.. +.. ..
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~ 91 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KE 91 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EE
Confidence 568999999999976554 47899999988 655443322345779999999999988877778899999986 332 22
Q ss_pred eeeccccCCeEEEeeCCCCeEEEEe-CCCeEEEEEccCCceee-eeecccceEEEEECCCCCeEEEEECCCeEEEEeCCC
Q psy9770 529 AQIAEHLGGIRTVSEGRGSQLIVGT-TRNCILVGSLNLGFSPV-VLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMS 606 (811)
Q Consensus 529 ~~~~~~~~~v~~l~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~-~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~ 606 (811)
..++.....+..+++.+++.++++. .++.|.+++........ ...+...+.++++.+++.++++...++.|..||. +
T Consensus 92 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~ 170 (299)
T 2z2n_A 92 YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S 170 (299)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C
Confidence 3333345578889999888888876 46789999983332222 1223457899999999988877767789999999 6
Q ss_pred CcEEEE-e-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEE-ecCCCCCeEEEEEccCCCEEEEEecCCcEE
Q psy9770 607 HSVVWS-K-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI-HTDGNEPIQVVKFSPDGKLLALGSRDNYIY 683 (811)
Q Consensus 607 ~~~~~~-~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~i~~spdg~~lasgs~dg~I~ 683 (811)
++.... . .....+..++++++|.++++...++.|.+||. +++.... ...+...+..++++++|+++++...++.|.
T Consensus 171 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 249 (299)
T 2z2n_A 171 GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIG 249 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEE
T ss_pred CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEE
Confidence 665443 2 22456889999999997766656789999999 6664432 333456789999999999776665678899
Q ss_pred EEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCc
Q psy9770 684 VYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCR 737 (811)
Q Consensus 684 iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~ 737 (811)
+|+.. + .... ..+..+...+.++++ +++.++++.. .+.|..++.++++
T Consensus 250 ~~d~~-g--~~~~-~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 250 RLTSN-N--IIEE-YPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EEETT-T--EEEE-EECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred EECCC-C--ceEE-EeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 99983 3 1111 123445677999999 8988877765 5677778877643
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.66 E-value=7.9e-13 Score=137.75 Aligned_cols=281 Identities=6% Similarity=-0.056 Sum_probs=200.7
Q ss_pred ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeC-CCeEEEEEccCCc
Q psy9770 489 VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTT-RNCILVGSLNLGF 567 (811)
Q Consensus 489 ~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~-~~~i~~~d~~~~~ 567 (811)
.+...+.++++.++|+++++...++.|.+||.. +.. ...........+..+++.+++.++++.. ++.|..|+.....
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 89 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGII 89 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE
Confidence 455679999999999988876668999999988 444 2333333456788999999888888766 6789999987432
Q ss_pred eeee-eecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe--cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEe
Q psy9770 568 SPVV-LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK--DIAEQAQSATFSPDGSIIIVGCIAGRWLVMD 644 (811)
Q Consensus 568 ~~~~-~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~--~~~~~v~~~~~spdg~~la~g~~dg~i~i~d 644 (811)
.... ......+.++++.+++.++++...++.|.+||. +++..... .....+..+++.++|.++++...++.|..||
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRIT 168 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEc
Confidence 2211 124457899999999988887777889999998 55544332 2345789999999998877766678999999
Q ss_pred cCCcceeEE-ecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEec
Q psy9770 645 SETREAYSI-HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNS 723 (811)
Q Consensus 645 ~~~~~~~~~-~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s 723 (811)
. +++.... .......+..++++++|+++++...++.|.+|+. ++. ... .....+...+.+++++++|+++++..
T Consensus 169 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~--~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 169 E-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE--ITE-FKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC--EEE-EECSSTTCCEEEEEECSTTCEEEEET
T ss_pred C-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc--EEE-EECCCCCCCceeEEECCCCCEEEecc
Confidence 8 6665443 3334556889999999997777666788999998 542 121 12344567799999999999887776
Q ss_pred CCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy9770 724 GDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAV 803 (811)
Q Consensus 724 ~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~ 803 (811)
.++.|..||. +++.. ... ...+...+.++++ ++|+++++... +.|..++..+.
T Consensus 244 ~~~~i~~~d~-~g~~~-~~~-----------------------~~~~~~~~~~i~~-~~g~l~v~~~~-~~l~~~~~~~~ 296 (299)
T 2z2n_A 244 GANKIGRLTS-NNIIE-EYP-----------------------IQIKSAEPHGICF-DGETIWFAMEC-DKIGKLTLIKD 296 (299)
T ss_dssp TTTEEEEEET-TTEEE-EEE-----------------------CSSSSCCEEEEEE-CSSCEEEEETT-TEEEEEEEC--
T ss_pred CCceEEEECC-CCceE-EEe-----------------------CCCCCCccceEEe-cCCCEEEEecC-CcEEEEEcCcc
Confidence 7889999998 34311 100 0112346889999 99988887664 56777777665
Q ss_pred C
Q psy9770 804 Q 804 (811)
Q Consensus 804 ~ 804 (811)
+
T Consensus 297 ~ 297 (299)
T 2z2n_A 297 N 297 (299)
T ss_dssp -
T ss_pred c
Confidence 4
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.66 E-value=1.2e-14 Score=155.40 Aligned_cols=254 Identities=12% Similarity=0.101 Sum_probs=173.3
Q ss_pred ceEEEEEecCCcEEEEec---------CCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEE-EEeCC---C--e
Q psy9770 493 SVFSICVLKEGSIISAGG---------KDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLI-VGTTR---N--C 557 (811)
Q Consensus 493 ~V~~l~~s~dg~~l~s~s---------~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~-~~~~~---~--~ 557 (811)
.+..+.+ ||+.++... .++.|.+||+..+.. ..+ ..+..+.++|++..+ ....+ + .
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~---~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR---RFI----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE---EEE----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce---EEc----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 4556666 777666432 256899999987654 222 457788999988644 44322 2 5
Q ss_pred EEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECC---------------------------CeEEEEeCCCCcEE
Q psy9770 558 ILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFD---------------------------RIVQLWDSMSHSVV 610 (811)
Q Consensus 558 i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d---------------------------g~v~iwd~~~~~~~ 610 (811)
|++|++.++....+..+.. +..++|+|+++.|+.++.+ ..|.+||+.+++.+
T Consensus 87 l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 87 IWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 8888988776555555555 9999999999998888742 57999999988773
Q ss_pred EEecCCCCeEEEEEcCCCCEEEEEEeCC---------eEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCC-
Q psy9770 611 WSKDIAEQAQSATFSPDGSIIIVGCIAG---------RWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDN- 680 (811)
Q Consensus 611 ~~~~~~~~v~~~~~spdg~~la~g~~dg---------~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg- 680 (811)
..+... .+..++|+||| +++++..++ .|.++| +++.. .+..+ ..+..+ +|||++|+.++.++
T Consensus 166 ~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~-~l~~~-~~~~~~--spdg~~l~~~~~~~~ 237 (347)
T 2gop_A 166 EEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEE-KMFEK-VSFYAV--DSDGERILLYGKPEK 237 (347)
T ss_dssp EEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEE-EEEEE-ESEEEE--EECSSCEEEEECCSS
T ss_pred eeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceE-EeccC-cceeeE--CCCCCEEEEEEcccc
Confidence 332224 78899999999 777765432 455555 55443 33333 445544 99999998877543
Q ss_pred -------cEEEEEecCCCcceeEEEEecCCCCCeeE-EEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEec
Q psy9770 681 -------YIYVYEVSGDSRKYSRVGRCTGHSSFITH-LDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWES 752 (811)
Q Consensus 681 -------~I~iwd~~~~~~~~~~~~~~~~h~~~V~~-l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~ 752 (811)
.|++|| ++ +......+|...+.. +.|+ |+ ++++++.++.+++| +.+++.....
T Consensus 238 ~~~~~~~~l~~~d--~~----~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~---------- 298 (347)
T 2gop_A 238 KYMSEHNKLYIYD--GK----EVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA---------- 298 (347)
T ss_dssp SCCCSSCEEEEEC--SS----CEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE----------
T ss_pred CCccccceEEEEC--CC----ceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe----------
Confidence 577777 32 222234556777886 9999 98 99999999999999 8754321100
Q ss_pred cceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcE-EEEeCC
Q psy9770 753 NSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKL-KLYSYP 801 (811)
Q Consensus 753 ~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v-~vw~~~ 801 (811)
.+...|.+++|+| .++++++.++.. .||.++
T Consensus 299 ----------------~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 299 ----------------KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp ----------------CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred ----------------cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 1245688999999 677777777765 888876
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.65 E-value=3.8e-14 Score=150.43 Aligned_cols=267 Identities=11% Similarity=0.031 Sum_probs=187.1
Q ss_pred cCCCcEEEEeCCCCCccceeee--c--cccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECC
Q psy9770 510 GKDGRLLQFDSNLQPTGYEAQI--A--EHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHP 585 (811)
Q Consensus 510 s~dg~I~~wd~~~~~~~~~~~~--~--~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp 585 (811)
+.++.|.+||.++++....... . ........+.+..+..+++...++.|.++|..+...............+++++
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~ 93 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLS 93 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEE
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeC
Confidence 3488999999988765221111 0 11123566776554444455557899999998875533224456788999988
Q ss_pred CCCeEEEEECCCeEEEEeCCCCcEEEEecCCC------CeEEEEEcCCCCEEEEEE--eCCeEEEEecCCcceeEEecCC
Q psy9770 586 SLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAE------QAQSATFSPDGSIIIVGC--IAGRWLVMDSETREAYSIHTDG 657 (811)
Q Consensus 586 ~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~------~v~~~~~spdg~~la~g~--~dg~i~i~d~~~~~~~~~~~~~ 657 (811)
++..+++...++.|.+||..+++....+.... ....+++ ++..|+++. .++.|.+||+.+++.+..+...
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 88555554489999999999999887766555 6677888 455566655 3789999999999988777653
Q ss_pred CCCeEEEEEccCCCEEEEEecC----------CcEEEEEecCCCcceeEEEEecCC-CCCeeEEEeCCCCCeEEEecCCc
Q psy9770 658 NEPIQVVKFSPDGKLLALGSRD----------NYIYVYEVSGDSRKYSRVGRCTGH-SSFITHLDWSEDSMYIRSNSGDY 726 (811)
Q Consensus 658 ~~~i~~i~~spdg~~lasgs~d----------g~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~l~~spdg~~L~s~s~Dg 726 (811)
.....++++|+|++++++..+ +.|++||..++ +....+... ......++|+||+++|.++..
T Consensus 172 -~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~----~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-- 244 (328)
T 3dsm_A 172 -IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF----TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-- 244 (328)
T ss_dssp -SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT----EEEEEEECCTTCCCEEEEECTTSCEEEEESS--
T ss_pred -CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC----eEEEEEecCCCCCceeEEEecCCCEEEEEcc--
Confidence 345789999999977776544 78999998875 333333322 236889999999999888755
Q ss_pred eEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecC-CCCEEEEE----cCCCcEEEEeCC
Q psy9770 727 ELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSH-DARVIATG----DDFGKLKLYSYP 801 (811)
Q Consensus 727 ~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~-dg~~Las~----~~dg~v~vw~~~ 801 (811)
.|.+||+.+++...... . . ........++++| +++++++. ..++.|.+|+..
T Consensus 245 ~v~~~d~~t~~~~~~~~-~--------------------~--~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 DIWRMPVEADRVPVRPF-L--------------------E--FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SEEEEETTCSSCCSSCS-B--------------------C--CCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEEEEECCCCceeeeee-e--------------------c--CCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 89999999887542110 0 0 0134578899999 56666766 678999999988
Q ss_pred CCCCCCcc
Q psy9770 802 AVQPKLCL 809 (811)
Q Consensus 802 ~~~~~~~~ 809 (811)
++.+..+
T Consensus 302 -g~~~~~i 308 (328)
T 3dsm_A 302 -GKLIDEF 308 (328)
T ss_dssp -CCEEEEE
T ss_pred -CCEEEEE
Confidence 8766544
No 189
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.63 E-value=1.6e-13 Score=145.49 Aligned_cols=296 Identities=11% Similarity=0.075 Sum_probs=194.5
Q ss_pred EccCCcEEEEec-------cEEEEEeCCCCceEE-eccCCCCeEEEEEcCCCcEEEEee----------ccCCCCCCCCC
Q psy9770 268 LLPTGEIVYFVA-------AVAVLYNVEEQTQRH-YLGHTDDIKCLSIHPNKLLIATGQ----------VAGHDAREGKP 329 (811)
Q Consensus 268 ~spdg~~l~~~~-------~~i~i~d~~~~~~~~-~~~h~~~V~~la~spdg~~Lasg~----------~dg~~~~~~~~ 329 (811)
..|+++.+|..+ +.|.++|..+++... +..-..+ . ++++|||++|.++. .++
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~-------- 109 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTD-------- 109 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEE--------
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCC--------
Confidence 358899888873 589999999987533 3222233 4 99999999887765 244
Q ss_pred eEEEEeCCCCcEEEEeccCC-----ccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEE
Q psy9770 330 HIRIWNSVSLFTVSIIGIGE-----FERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVV 404 (811)
Q Consensus 330 ~I~iWd~~t~~~~~~l~~~~-----h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~ 404 (811)
.|.+||..+++.+..+.+.. .......++|+| ||++|+......++.|.|+|+.+++ .+.++.....
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp--DGk~lyVan~~~~~~VsVID~~t~~---vv~tI~v~g~--- 181 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP--DGKTLLFYQFSPAPAVGVVDLEGKA---FKRMLDVPDC--- 181 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT--TSSEEEEEECSSSCEEEEEETTTTE---EEEEEECCSE---
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC--CCCEEEEEEcCCCCeEEEEECCCCc---EEEEEECCCc---
Confidence 89999999999999886432 012455789999 8998886422347899999999998 7777754321
Q ss_pred EEEecCCCCCeEEEECCCcEEEEEEcC-CceeeeecccccccCCCCceE-EEEEE-cCCCcEEEEcCCCcEEEEecCCce
Q psy9770 405 AAEFHPLDRNNIVTCGKSHINFWTIDA-GGTLYKKQGIFEMIRDKPKYV-TCLAF-TQGGEVLSGDSNGNIIVWTRGSNT 481 (811)
Q Consensus 405 ~v~fsp~~~~ll~~~~d~~i~iwd~~~-~~~~~~~~~~~~~l~~~~~~v-~~l~~-s~~g~llsg~~dg~I~vwd~~~~~ 481 (811)
...+......+++.|.||.+.+.++.+ +.........+.. ....+ ....| .++|+++..+.+|.|++.|..++.
T Consensus 182 ~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~---~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 182 YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP---EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGD 258 (386)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSC---TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSS
T ss_pred ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecc---ccccccccceeEcCCCcEEEEeCCCEEEEEECCCCc
Confidence 222333234455778899998888875 3332211111111 11111 12355 478887667778999999997654
Q ss_pred --EEEEee---------cccccceEEEEEecCCcEEEEecC----------CCcEEEEeCCCCCccceeeeccccCCeEE
Q psy9770 482 --ISKFIR---------NVHEGSVFSICVLKEGSIISAGGK----------DGRLLQFDSNLQPTGYEAQIAEHLGGIRT 540 (811)
Q Consensus 482 --~~~~~~---------~~h~~~V~~l~~s~dg~~l~s~s~----------dg~I~~wd~~~~~~~~~~~~~~~~~~v~~ 540 (811)
....+. ....+.+..++++++++.++.... ...|.++|+.+.+.
T Consensus 259 ~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv--------------- 323 (386)
T 3sjl_D 259 AKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER--------------- 323 (386)
T ss_dssp CEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE---------------
T ss_pred ceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeE---------------
Confidence 222221 011233445667887777765432 13455555555444
Q ss_pred EeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCC-eEEEEE-CCCeEEEEeCCCCcEEEEecCCCC
Q psy9770 541 VSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLS-QFLTAG-FDRIVQLWDSMSHSVVWSKDIAEQ 618 (811)
Q Consensus 541 l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~-~l~s~s-~dg~v~iwd~~~~~~~~~~~~~~~ 618 (811)
.....-...++.+++++|++ +|++.. .++.|.++|..+++.+..+.....
T Consensus 324 ----------------------------~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~ 375 (386)
T 3sjl_D 324 ----------------------------LAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGH 375 (386)
T ss_dssp ----------------------------EEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCS
T ss_pred ----------------------------EEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCC
Confidence 11111123677999999996 666654 589999999999999999988888
Q ss_pred eEEEEEcCC
Q psy9770 619 AQSATFSPD 627 (811)
Q Consensus 619 v~~~~~spd 627 (811)
...+.+++|
T Consensus 376 p~~l~~s~d 384 (386)
T 3sjl_D 376 GPQVITTAD 384 (386)
T ss_dssp SCCEEEECC
T ss_pred CceeEECCc
Confidence 888888877
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=1.2e-13 Score=146.54 Aligned_cols=264 Identities=10% Similarity=-0.035 Sum_probs=190.5
Q ss_pred CCCcEEEEecCCceEEEEeec-----ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEe
Q psy9770 468 SNGNIIVWTRGSNTISKFIRN-----VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVS 542 (811)
Q Consensus 468 ~dg~I~vwd~~~~~~~~~~~~-----~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~ 542 (811)
.++.|.+||..+++....+.. ........+++. ++++.++...++.|.+||..+.+.. ..+. .......++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~--~~i~-~~~~p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEV--GRIT-GFTSPRYIH 90 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEE--EEEE-CCSSEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEE--EEcC-CCCCCcEEE
Confidence 478999999999987765421 112345677774 4566666777899999999887762 2332 345678888
Q ss_pred eCCCCeEEEEe-CCCeEEEEEccCCcee-eeeecc-----cceEEEEECCCCCeEEEEE--CCCeEEEEeCCCCcEEEEe
Q psy9770 543 EGRGSQLIVGT-TRNCILVGSLNLGFSP-VVLGHT-----DELWALAAHPSLSQFLTAG--FDRIVQLWDSMSHSVVWSK 613 (811)
Q Consensus 543 ~~~~~~l~~~~-~~~~i~~~d~~~~~~~-~~~~h~-----~~v~~l~~sp~~~~l~s~s--~dg~v~iwd~~~~~~~~~~ 613 (811)
+++++.++++. .++.|.++|..+.... .+.... .....+++ ++..++.+. .++.|.++|..+++.+..+
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 87778888887 7899999999876443 232221 14556777 344555554 4889999999999988887
Q ss_pred cCCCCeEEEEEcCCCCEEEEEEeC----------CeEEEEecCCcceeEEecCC-CCCeEEEEEccCCCEEEEEecCCcE
Q psy9770 614 DIAEQAQSATFSPDGSIIIVGCIA----------GRWLVMDSETREAYSIHTDG-NEPIQVVKFSPDGKLLALGSRDNYI 682 (811)
Q Consensus 614 ~~~~~v~~~~~spdg~~la~g~~d----------g~i~i~d~~~~~~~~~~~~~-~~~i~~i~~spdg~~lasgs~dg~I 682 (811)
........++++|+|++++++..+ +.|.++|..+++....+... ......++|+||+++|+++.. .|
T Consensus 169 ~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v 246 (328)
T 3dsm_A 169 TIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DI 246 (328)
T ss_dssp ECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SE
T ss_pred EcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EE
Confidence 777777899999999977766554 78999999999887666532 246889999999999988754 89
Q ss_pred EEEEecCCCcceeEEEEecCCCCCeeEEEeCC-CCCeEEEe----cCCceEEEEECCCCcccCCC
Q psy9770 683 YVYEVSGDSRKYSRVGRCTGHSSFITHLDWSE-DSMYIRSN----SGDYELLYWNAGTCRQIPQS 742 (811)
Q Consensus 683 ~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~L~s~----s~Dg~i~iWd~~~~~~~~~~ 742 (811)
++||..++...... .+..+......++++| ++.++++. ..++.|.+||.. |+.+..+
T Consensus 247 ~~~d~~t~~~~~~~--~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 247 WRMPVEADRVPVRP--FLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp EEEETTCSSCCSSC--SBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred EEEECCCCceeeee--eecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 99999876421111 1122246788999999 55666665 578999999998 8776644
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.62 E-value=3.1e-12 Score=137.62 Aligned_cols=296 Identities=8% Similarity=-0.048 Sum_probs=178.2
Q ss_pred ccCCcEEEEecc-------EEEEEeCCCCceEE-eccCCCCeEEEEEcCCCcEEEEeeccCCC--CCCCCCeEEEEeCCC
Q psy9770 269 LPTGEIVYFVAA-------VAVLYNVEEQTQRH-YLGHTDDIKCLSIHPNKLLIATGQVAGHD--AREGKPHIRIWNSVS 338 (811)
Q Consensus 269 spdg~~l~~~~~-------~i~i~d~~~~~~~~-~~~h~~~V~~la~spdg~~Lasg~~dg~~--~~~~~~~I~iWd~~t 338 (811)
.|+++.+|..+. .|.+||..+++... +...... .++|||||++|+++...... .......|.+||..+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 367788887764 88999999886533 2222222 99999999999888631000 000112899999999
Q ss_pred CcEEEEeccCCc-----cccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEE-eeeCCCcEEEEEecCCC
Q psy9770 339 LFTVSIIGIGEF-----ERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITE-TKCSVDTVVAAEFHPLD 412 (811)
Q Consensus 339 ~~~~~~l~~~~h-----~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~-~~~~~~~V~~v~fsp~~ 412 (811)
++.+..+.+.+- ......++|+| ||++|++.....++.|.++| ++++ .+.. +.... ++.+.|++
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~sp--DG~~l~v~n~~~~~~v~viD-~t~~---~~~~~i~~~~----~~~~~~~~ 176 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTP--NNADLLFFQFAAGPAVGLVV-QGGS---SDDQLLSSPT----CYHIHPGA 176 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECC--CCCEEEEEecCCCCeEEEEE-CCCC---EEeEEcCCCc----eEEEEeCC
Confidence 999988764310 12345889999 89998864222357899999 8877 4444 32111 12222222
Q ss_pred CCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeec----
Q psy9770 413 RNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRN---- 488 (811)
Q Consensus 413 ~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~---- 488 (811)
+.. +++.+.||.+.++|. +++.......
T Consensus 177 ~~~-----------------------------------------------~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~ 208 (373)
T 2mad_H 177 PST-----------------------------------------------FYLLCAQGGLAKTDH-AGGAAGAGLVGAML 208 (373)
T ss_pred Cce-----------------------------------------------EEEEcCCCCEEEEEC-CCcEEEEEeccccc
Confidence 221 233344455555555 4433321110
Q ss_pred ccccc-eEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCc
Q psy9770 489 VHEGS-VFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGF 567 (811)
Q Consensus 489 ~h~~~-V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~ 567 (811)
....+ .....+.+++..++..+..+.+.+.|+.......... |++....
T Consensus 209 ~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~------------------------------~~~~~~~ 258 (373)
T 2mad_H 209 TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAP------------------------------IDALSGG 258 (373)
T ss_pred cCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeee------------------------------eeecCCc
Confidence 00111 1223455554443334567788888886543200000 1110000
Q ss_pred eeeeeecccceEEEEECCCCCeEEEEEC----------CCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCC-EEEEEE-
Q psy9770 568 SPVVLGHTDELWALAAHPSLSQFLTAGF----------DRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGS-IIIVGC- 635 (811)
Q Consensus 568 ~~~~~~h~~~v~~l~~sp~~~~l~s~s~----------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~-~la~g~- 635 (811)
.............++++|+++.++.+.. ++.|.++|+.+++.+..+.......+++|+|||+ .++++.
T Consensus 259 ~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~ 338 (373)
T 2mad_H 259 RKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSA 338 (373)
T ss_pred ccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcC
Confidence 0000011223445778999887777653 3589999999999999988888899999999999 677766
Q ss_pred eCCeEEEEecCCcceeEEe
Q psy9770 636 IAGRWLVMDSETREAYSIH 654 (811)
Q Consensus 636 ~dg~i~i~d~~~~~~~~~~ 654 (811)
.++.|.+||+.+++.+..+
T Consensus 339 ~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 339 GTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCeEEEEECCCCCEEeee
Confidence 4899999999999998873
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=8.2e-14 Score=145.49 Aligned_cols=232 Identities=11% Similarity=0.061 Sum_probs=172.2
Q ss_pred CceEEEEEEcCCCc--EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCcc
Q psy9770 449 PKYVTCLAFTQGGE--VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTG 526 (811)
Q Consensus 449 ~~~v~~l~~s~~g~--llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~ 526 (811)
.....+++|+|+|+ ++++..++.|.+||..++ ...+. .+...+.+++++++|+++++...++.|.+||..++...
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~-~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEM-HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEE-SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEE-CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 34578999999998 458888999999999887 44554 57778999999999999887777889999999766652
Q ss_pred ceeee-c-cccCCeEEEeeCCCCeEEEE-----e-------------CCCeEEEEEccCCceeeeeecccceEEEEECCC
Q psy9770 527 YEAQI-A-EHLGGIRTVSEGRGSQLIVG-----T-------------TRNCILVGSLNLGFSPVVLGHTDELWALAAHPS 586 (811)
Q Consensus 527 ~~~~~-~-~~~~~v~~l~~~~~~~l~~~-----~-------------~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~ 586 (811)
..... . .....+..+++++++.++++ + ..+.|+.++.. +....+..+......++|+|+
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTT
T ss_pred EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCC
Confidence 11111 1 11234567889999998884 2 13477777766 444455566677899999999
Q ss_pred CCeEEEEECCCeEEEEeCC-CCcE---EEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCe
Q psy9770 587 LSQFLTAGFDRIVQLWDSM-SHSV---VWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPI 661 (811)
Q Consensus 587 ~~~l~s~s~dg~v~iwd~~-~~~~---~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i 661 (811)
++.+++.+.++.|.+|++. +++. ...+ .....+..++++++|+++++. ++.|.+||.. ++.+..+..+.. +
T Consensus 183 g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~ 258 (296)
T 3e5z_A 183 GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-T 258 (296)
T ss_dssp SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-C
T ss_pred CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-c
Confidence 9988777778999999986 4544 1222 233456789999999866655 8899999986 777777777766 8
Q ss_pred EEEEE-ccCCCEEEEEecCCcEEEEEecC
Q psy9770 662 QVVKF-SPDGKLLALGSRDNYIYVYEVSG 689 (811)
Q Consensus 662 ~~i~~-spdg~~lasgs~dg~I~iwd~~~ 689 (811)
++++| +|+++.|++++.++ +.-++..+
T Consensus 259 ~~~~f~~~d~~~L~v~t~~~-l~~~~~~~ 286 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTVSTE-FWSIETNV 286 (296)
T ss_dssp CEEEEESTTSCEEEEEETTE-EEEEECSC
T ss_pred eeEEEECCCCCEEEEEcCCe-EEEEEccc
Confidence 99999 58999999888763 54555544
No 193
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.60 E-value=4.6e-13 Score=139.75 Aligned_cols=236 Identities=10% Similarity=0.009 Sum_probs=172.3
Q ss_pred ccccceEEEEEecCCc-EEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCC-CeEEEEEccCC
Q psy9770 489 VHEGSVFSICVLKEGS-IISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTR-NCILVGSLNLG 566 (811)
Q Consensus 489 ~h~~~V~~l~~s~dg~-~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~-~~i~~~d~~~~ 566 (811)
.+.....+++|+++|+ +++++..++.|..||...+ . ..+......+..+++++++.++++... +.|.+||..++
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~---~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L---SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E---EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e---EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 4556678999999998 7778888999999999876 3 334445667889999999988887764 79999999666
Q ss_pred ceeeee-ec----ccceEEEEECCCCCeEEEEEC-----------------CCeEEEEeCCCCcEEEEecCCCCeEEEEE
Q psy9770 567 FSPVVL-GH----TDELWALAAHPSLSQFLTAGF-----------------DRIVQLWDSMSHSVVWSKDIAEQAQSATF 624 (811)
Q Consensus 567 ~~~~~~-~h----~~~v~~l~~sp~~~~l~s~s~-----------------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~ 624 (811)
....+. .. ...+.+++++|+|+++++.+. .+.|..++.. ++..........+..++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~ 179 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAF 179 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEE
Confidence 443332 11 234668999999998887321 3466666665 555444555567899999
Q ss_pred cCCCCEEEEEEeCCeEEEEecC-Ccce---eEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEe
Q psy9770 625 SPDGSIIIVGCIAGRWLVMDSE-TREA---YSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRC 700 (811)
Q Consensus 625 spdg~~la~g~~dg~i~i~d~~-~~~~---~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~ 700 (811)
+|+|+.|++.+.++.|.+||+. +++. ...+..+...+..++++++|+++++. ++.|++|+... +.+..+
T Consensus 180 s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g-----~~~~~~ 252 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDG-----DELGRV 252 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTS-----CEEEEE
T ss_pred CCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCC-----CEEEEE
Confidence 9999999666678899999986 4544 23333344566789999999976665 78899999763 345556
Q ss_pred cCCCCCeeEEEe-CCCCCeEEEecCCceEEEEECCCCcc
Q psy9770 701 TGHSSFITHLDW-SEDSMYIRSNSGDYELLYWNAGTCRQ 738 (811)
Q Consensus 701 ~~h~~~V~~l~~-spdg~~L~s~s~Dg~i~iWd~~~~~~ 738 (811)
..+.. +++++| +|+++.|++++.+ .|.-++.++.+.
T Consensus 253 ~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 253 LTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp ECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred ECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 66666 999999 6899988888776 455566666543
No 194
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=4e-10 Score=134.28 Aligned_cols=491 Identities=10% Similarity=0.062 Sum_probs=299.1
Q ss_pred ccceEEccCCcEEEEeccEEEEEeCCCCceEEec--c--------CCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEE
Q psy9770 263 RSNLYLLPTGEIVYFVAAVAVLYNVEEQTQRHYL--G--------HTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIR 332 (811)
Q Consensus 263 ~~~l~~spdg~~l~~~~~~i~i~d~~~~~~~~~~--~--------h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~ 332 (811)
+.+|+-.++|.+-....+-+..||-.+- +.+. . ....|.++...++|..|-.|+.++ -+.
T Consensus 21 V~~I~qD~~G~lWigT~~GL~ryDG~~f--~~~~~~~~~~~~~~l~~n~I~~i~~d~~g~~lWigt~~~--------Gl~ 90 (781)
T 3v9f_A 21 VLSITQDKQGFLWFATEEGLNKFDGTRF--ITYYKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRA--------GLN 90 (781)
T ss_dssp EEEEEECTTSCEEEEESSCEEEECSSSE--EEECCCSSCSSSCCCSCSCEEEEEECSSSSEEEEEESSS--------CEE
T ss_pred eEEEEECCCCCEEEccCCcCccccCCce--EEEEcCCCCCccccccccccceEEEcCCCCEEEEEeCCC--------Ccc
Confidence 4455556667654444455667775532 2221 1 124699999999998344466663 389
Q ss_pred EEeCCCCcEEEEecc--C---CccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeee------CCC
Q psy9770 333 IWNSVSLFTVSIIGI--G---EFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKC------SVD 401 (811)
Q Consensus 333 iWd~~t~~~~~~l~~--~---~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~------~~~ 401 (811)
.||..+.+....... . -....|.++.....++|.+.+. ..++-|..+|.++++ +..+.. ...
T Consensus 91 ~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~---t~~~gl~~~~~~~~~----~~~~~~~~~~~l~~~ 163 (781)
T 3v9f_A 91 AYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVC---TYYRGIEYLDIATGK----FTHYNKSTVPALPSE 163 (781)
T ss_dssp EEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEE---ESSSCEEEEETTTTE----EEEESTTTCTTCSCC
T ss_pred eECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEE---ECCCCeeEEECCCCe----EEeeccCcccCCCcc
Confidence 999987765443110 0 0123588776653114555553 334558888987654 333321 234
Q ss_pred cEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeeccccc-ccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCc
Q psy9770 402 TVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFE-MIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSN 480 (811)
Q Consensus 402 ~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~-~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~ 480 (811)
.|.++...+ ++.+.+++.++.|..|+..++ .+........ ...-....|.++...++|.+..|+.+ -|.+||..++
T Consensus 164 ~i~~i~~d~-~g~lwigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~ 240 (781)
T 3v9f_A 164 QTWTATEAE-DGKLYIGHVEGGLSILSLNDK-SVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTSK-GLALFNANTE 240 (781)
T ss_dssp CEEEEEEEE-TTEEEEEETTTEEEEEETTTT-EEEEECC--------CCSSEEEEEECTTCCEEEEETT-EEEEEETTTT
T ss_pred ceEEEEECC-CCCEEEEecCCCeEEEcCCCC-ceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEeCC-cHheECCCCC
Confidence 577777766 455666666656888887643 2222211000 00001245899999999998877776 6999998877
Q ss_pred eEEEEeec------ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceee------------eccccCCeEEEe
Q psy9770 481 TISKFIRN------VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ------------IAEHLGGIRTVS 542 (811)
Q Consensus 481 ~~~~~~~~------~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~------------~~~~~~~v~~l~ 542 (811)
+....... .....|.++...++|.+.+ |+..+-|.++|........... ..-....|.++.
T Consensus 241 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~ 319 (781)
T 3v9f_A 241 TFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIF 319 (781)
T ss_dssp EEEC-----------CCCCEEEEEECTTSEEEE-EESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEE
T ss_pred cEEEEEcCCCccccccCceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEE
Confidence 65433220 1245799999988888776 6665678889987655411111 011235689999
Q ss_pred eCCCCeEEEEeCCCeEEEEEccCCceeeeee----------cccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEE
Q psy9770 543 EGRGSQLIVGTTRNCILVGSLNLGFSPVVLG----------HTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWS 612 (811)
Q Consensus 543 ~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~----------h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~ 612 (811)
..+++.+.+|+.++.|..++........+.. ....|.++...+++. |..|+.++-|..||..++.....
T Consensus 320 ~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~ 398 (781)
T 3v9f_A 320 QDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYN 398 (781)
T ss_dssp ECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC
T ss_pred EeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEc
Confidence 9999999999999999999887654333211 235689999988776 44566666788999876543321
Q ss_pred e----cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEec--CCCCCeEEEEEccCCCEEEEEecCCcEEEEE
Q psy9770 613 K----DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHT--DGNEPIQVVKFSPDGKLLALGSRDNYIYVYE 686 (811)
Q Consensus 613 ~----~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~i~~spdg~~lasgs~dg~I~iwd 686 (811)
. .....|.++...++|.+. +|+.++.+..+|..+++...... .....|.++...++|.+.+ |+. +-|.+|+
T Consensus 399 ~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~ 475 (781)
T 3v9f_A 399 KENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVID 475 (781)
T ss_dssp -----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEE
T ss_pred cCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEe
Confidence 1 123568899988888654 46766779999987765433321 2346789999888887554 445 5588898
Q ss_pred ecCCCcceeEEEEec---CCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceee
Q psy9770 687 VSGDSRKYSRVGRCT---GHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIG 763 (811)
Q Consensus 687 ~~~~~~~~~~~~~~~---~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (811)
..++. +....... .....|.++...++|.+.+....+| |..||..+++... +..
T Consensus 476 ~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~-~~~------------------- 532 (781)
T 3v9f_A 476 LASKK--VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRK-FNQ------------------- 532 (781)
T ss_dssp SSSSS--CCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEE-ECT-------------------
T ss_pred CCCCe--EEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEE-ccC-------------------
Confidence 77653 22221111 1146799999999998776554344 7778877654211 100
Q ss_pred eCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCC
Q psy9770 764 IWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQ 804 (811)
Q Consensus 764 i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~ 804 (811)
..+.....|.++...++|++.+... +|.|..|+..+++
T Consensus 533 --~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 533 --YEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFD 570 (781)
T ss_dssp --TTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCC
T ss_pred --CCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCc
Confidence 0111245688999988998777555 6754777766543
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.60 E-value=2.7e-13 Score=139.27 Aligned_cols=240 Identities=9% Similarity=0.026 Sum_probs=175.1
Q ss_pred ceEEEEEecCCcEEE-EecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeee
Q psy9770 493 SVFSICVLKEGSIIS-AGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVV 571 (811)
Q Consensus 493 ~V~~l~~s~dg~~l~-s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~ 571 (811)
...++++.++|++++ +...++.|.+||...... . .........+..+++.+++.++++..++.|++|+........+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~-~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT-T-VLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------E-ECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc-c-eEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeee
Confidence 678899999999777 557789999999765443 1 1112233457788888888888887788999999887654433
Q ss_pred e-ecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcc
Q psy9770 572 L-GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETRE 649 (811)
Q Consensus 572 ~-~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~ 649 (811)
. .....+.++++++++.++++...++.|.+|+..+....... .....+.+++++++|+++++...++.|.+||.....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 3 23357899999999998887777889999987665443322 222467889999999977766667899999988766
Q ss_pred eeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEE
Q psy9770 650 AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELL 729 (811)
Q Consensus 650 ~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~ 729 (811)
.......+...+..++++++|.++++...++.|.+|+...... ......+...+.+++++++|+++++...++.|.
T Consensus 183 ~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 183 QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS----TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC----EECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc----eeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 5544334446788999999998777776788999999865421 111223345789999999999999999999999
Q ss_pred EEECCCCcc
Q psy9770 730 YWNAGTCRQ 738 (811)
Q Consensus 730 iWd~~~~~~ 738 (811)
++++...+.
T Consensus 259 ~~~~~~~~~ 267 (270)
T 1rwi_B 259 KLTSLEHHH 267 (270)
T ss_dssp EECCCGGGS
T ss_pred EEcCCCccc
Confidence 999876554
No 196
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.60 E-value=3.9e-13 Score=158.63 Aligned_cols=294 Identities=9% Similarity=-0.043 Sum_probs=182.9
Q ss_pred CCCCCeEEEECC-C--cEEEEEEcC-CceeeeecccccccCCCCceEEEEEEcCCCcEE-EE-cCCC----cEEEEecCC
Q psy9770 410 PLDRNNIVTCGK-S--HINFWTIDA-GGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVL-SG-DSNG----NIIVWTRGS 479 (811)
Q Consensus 410 p~~~~ll~~~~d-~--~i~iwd~~~-~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~ll-sg-~~dg----~I~vwd~~~ 479 (811)
|+++.++....+ + .-.+|.... +.....+.....--.++...+..++|+|||+.+ .+ +.+| .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 667776666543 2 224565542 111111110001012344578899999999944 33 3233 899999999
Q ss_pred ceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEE
Q psy9770 480 NTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCIL 559 (811)
Q Consensus 480 ~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~ 559 (811)
++...... ....+..++|+|||+.|+.++.++. .... .+ ... . ......|+
T Consensus 161 g~~~~~~~--~~~~~~~~~wspDg~~l~~~~~~~~-------~~~~------~~---~~~-----~------~~~~~~v~ 211 (710)
T 2xdw_A 161 AKELPDVL--ERVKFSCMAWTHDGKGMFYNAYPQQ-------DGKS------DG---TET-----S------TNLHQKLY 211 (710)
T ss_dssp TEEEEEEE--EEECSCCEEECTTSSEEEEEECCCC-------SSCC------SS---SCC-----C------CCCCCEEE
T ss_pred CCCCcccc--cCcccceEEEEeCCCEEEEEEECCc-------cccc------cc---ccc-----c------cCCCCEEE
Confidence 98776433 2233678999999999988776653 0000 00 000 0 00123455
Q ss_pred EEEccCCce---eeeee--cccceEEEEECCCCCeEEEEEC-----CCeEEEEeCCC------C--cEEEEecCCCCeEE
Q psy9770 560 VGSLNLGFS---PVVLG--HTDELWALAAHPSLSQFLTAGF-----DRIVQLWDSMS------H--SVVWSKDIAEQAQS 621 (811)
Q Consensus 560 ~~d~~~~~~---~~~~~--h~~~v~~l~~sp~~~~l~s~s~-----dg~v~iwd~~~------~--~~~~~~~~~~~v~~ 621 (811)
+|++.++.. ..... |...+..+.|+|||++|+..+. +..|.+||+.+ + ...........+..
T Consensus 212 ~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~ 291 (710)
T 2xdw_A 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD 291 (710)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE
T ss_pred EEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE
Confidence 555554421 11122 3445778999999999888765 56899999976 4 23333344444444
Q ss_pred EEEcCCCCEEEEEEeCC----eEEEEecCCcc--eeEEecCCCC--CeEEEEEccCCCEEEEEecCCcE--EEEEecCCC
Q psy9770 622 ATFSPDGSIIIVGCIAG----RWLVMDSETRE--AYSIHTDGNE--PIQVVKFSPDGKLLALGSRDNYI--YVYEVSGDS 691 (811)
Q Consensus 622 ~~~spdg~~la~g~~dg----~i~i~d~~~~~--~~~~~~~~~~--~i~~i~~spdg~~lasgs~dg~I--~iwd~~~~~ 691 (811)
.|+|+|..|+..+..+ .|.+||+.++. ....+..+.. .+..++|++++.++++...++.. ++|++.++
T Consensus 292 -~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g- 369 (710)
T 2xdw_A 292 -YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATG- 369 (710)
T ss_dssp -EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTC-
T ss_pred -EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCC-
Confidence 5889999988877643 69999998764 2344444433 68889999888888888888865 45555444
Q ss_pred cceeEEEEecCCCCCeeEEEeCCCCCeEEEe----cCCceEEEEECCCCc
Q psy9770 692 RKYSRVGRCTGHSSFITHLDWSEDSMYIRSN----SGDYELLYWNAGTCR 737 (811)
Q Consensus 692 ~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~----s~Dg~i~iWd~~~~~ 737 (811)
+.+..+..+.+.|..+.++|+++.|+.. ...++|+.||+.+++
T Consensus 370 ---~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 370 ---ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ---CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ---CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 2344566677889999999999766633 235789999998876
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.59 E-value=3.2e-13 Score=138.70 Aligned_cols=240 Identities=9% Similarity=0.012 Sum_probs=171.8
Q ss_pred CeEEEeeCCCCeEEE-E-eCCCeEEEEEccCCceeee-eecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe
Q psy9770 537 GIRTVSEGRGSQLIV-G-TTRNCILVGSLNLGFSPVV-LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK 613 (811)
Q Consensus 537 ~v~~l~~~~~~~l~~-~-~~~~~i~~~d~~~~~~~~~-~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 613 (811)
....+++++++.+++ + ..++.|.+|+..+...... ..+...+.+++++++++++++.. ++.|.+||..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 567788888888887 6 5678999998766543322 23335678999999998666655 889999998776543322
Q ss_pred -cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCc
Q psy9770 614 -DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR 692 (811)
Q Consensus 614 -~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~ 692 (811)
.....+..++++++|+++++...++.|.+|+..+.............+..++++++|+++++...++.|++|+.....
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~- 182 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN- 182 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC-
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc-
Confidence 223578999999999977776678899999876554433333333467889999999977776677899999987642
Q ss_pred ceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCC
Q psy9770 693 KYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGT 772 (811)
Q Consensus 693 ~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~ 772 (811)
.......+...+.+++++++|.++++...++.|.+|+..+....... ..+..
T Consensus 183 ---~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~-------------------------~~~~~ 234 (270)
T 1rwi_B 183 ---QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP-------------------------FTGLN 234 (270)
T ss_dssp ---EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC-------------------------CCSCS
T ss_pred ---eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec-------------------------cCCCC
Confidence 11112233367899999999988888878899999998654322110 01124
Q ss_pred ccceEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q psy9770 773 DVNSCERSHDARVIATGDDFGKLKLYSYPAVQPK 806 (811)
Q Consensus 773 ~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~~ 806 (811)
.+.+++++++|+++++...++.|++|+++..+..
T Consensus 235 ~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 235 TPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSC
T ss_pred CceeEEECCCCCEEEEECCCCEEEEEcCCCcccc
Confidence 5889999999999999999999999999876654
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.58 E-value=1.3e-11 Score=128.57 Aligned_cols=274 Identities=10% Similarity=0.027 Sum_probs=195.0
Q ss_pred ceEEEEEEcCCCcEE-EEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccce
Q psy9770 450 KYVTCLAFTQGGEVL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYE 528 (811)
Q Consensus 450 ~~v~~l~~s~~g~ll-sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~ 528 (811)
..+.++++.++|.++ +...++.|.+||.. ++........+...+.++++.++|+++++...++.|..||.. +.. ..
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~ 96 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TE 96 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-EE
Confidence 458899999999966 44467999999988 655443222334678999999999988877778899999987 444 23
Q ss_pred eeeccccCCeEEEeeCCCCeEEEEeC-CCeEEEEEccCCceee-eeecccceEEEEECCCCCeEEEEECCCeEEEEeCCC
Q psy9770 529 AQIAEHLGGIRTVSEGRGSQLIVGTT-RNCILVGSLNLGFSPV-VLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMS 606 (811)
Q Consensus 529 ~~~~~~~~~v~~l~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~-~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~ 606 (811)
..+......+..+++.+++.++++.. .+.|..++........ +......+.++++.++++++++...++.|..||. +
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 175 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-T 175 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-C
Confidence 33333446688899988888888766 6789999987332222 1223457899999999997776666789999998 5
Q ss_pred CcEEEEe--cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEE-ecCCCCCeEEEEEccCCCEEEEEecCCcEE
Q psy9770 607 HSVVWSK--DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI-HTDGNEPIQVVKFSPDGKLLALGSRDNYIY 683 (811)
Q Consensus 607 ~~~~~~~--~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~i~~spdg~~lasgs~dg~I~ 683 (811)
++..... .....+..++++++|.++++....+.|.+||. +++.... +..+...+.+++++++|+++++...++.|.
T Consensus 176 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 254 (300)
T 2qc5_A 176 GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIG 254 (300)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEE
T ss_pred CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEE
Confidence 5544322 22356889999999987776666778999998 4554332 334456788999999999776665678899
Q ss_pred EEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECC
Q psy9770 684 VYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAG 734 (811)
Q Consensus 684 iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~ 734 (811)
.|+.. +. ... ..+......+.++++.++|+++++.. . .|..+|.+
T Consensus 255 ~~~~~-g~--~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 255 RITND-NT--IQE-YQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EECTT-SC--EEE-EECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred EECCC-Cc--EEE-EECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 99973 31 111 12333456688999999998777665 5 77777754
No 199
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.58 E-value=4.5e-13 Score=158.11 Aligned_cols=274 Identities=8% Similarity=0.019 Sum_probs=181.5
Q ss_pred CCCcE-E-EEcCC----CcEEEEecCCceEEEEee-----cccccceEEEEEecCCcEEEEecCCC-----cEEEEeCCC
Q psy9770 459 QGGEV-L-SGDSN----GNIIVWTRGSNTISKFIR-----NVHEGSVFSICVLKEGSIISAGGKDG-----RLLQFDSNL 522 (811)
Q Consensus 459 ~~g~l-l-sg~~d----g~I~vwd~~~~~~~~~~~-----~~h~~~V~~l~~s~dg~~l~s~s~dg-----~I~~wd~~~ 522 (811)
|+|.. + +-... +.|++.+..+++....+. ..|...+..++|+|||++|+.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 77773 2 33222 245555655554433322 12444688999999999988665433 788888876
Q ss_pred CCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCe----
Q psy9770 523 QPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRI---- 598 (811)
Q Consensus 523 ~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~---- 598 (811)
++... . ......+..++|+||++.|+.++.++.
T Consensus 161 g~~~~-~------------------------------------------~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 161 AKELP-D------------------------------------------VLERVKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TEEEE-E------------------------------------------EEEEECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCCCc-c------------------------------------------cccCcccceEEEEeCCCEEEEEEECCccccc
Confidence 65410 0 001112456889999998888887765
Q ss_pred ------------EEEEeCCCCc----EEEEec-CCCCeEEEEEcCCCCEEEEEEe-----CCeEEEEecCC------cc-
Q psy9770 599 ------------VQLWDSMSHS----VVWSKD-IAEQAQSATFSPDGSIIIVGCI-----AGRWLVMDSET------RE- 649 (811)
Q Consensus 599 ------------v~iwd~~~~~----~~~~~~-~~~~v~~~~~spdg~~la~g~~-----dg~i~i~d~~~------~~- 649 (811)
|++|++.+++ ++.... +...+..+.|+|||++|+.... +..|++||+.+ +.
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 9999998876 222222 3445789999999999998876 56899999986 43
Q ss_pred eeEEecCCCCCeEEEEEccCCCEEEEEecCC----cEEEEEecCCCc-ceeEEEEecCCCC--CeeEEEeCCCCCeEEEe
Q psy9770 650 AYSIHTDGNEPIQVVKFSPDGKLLALGSRDN----YIYVYEVSGDSR-KYSRVGRCTGHSS--FITHLDWSEDSMYIRSN 722 (811)
Q Consensus 650 ~~~~~~~~~~~i~~i~~spdg~~lasgs~dg----~I~iwd~~~~~~-~~~~~~~~~~h~~--~V~~l~~spdg~~L~s~ 722 (811)
....+..+...+.. .|+++|..|+..+..+ .|++|++.++.. .++ .+..|.. .+..++|++++.++++.
T Consensus 278 ~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 278 KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWK---VLVPEHEKDVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE---EEECCCSSCEEEEEEEETTTEEEEEE
T ss_pred ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccce---eccCCCCCCeEEEEEEEcCCEEEEEE
Confidence 35555555555554 5899999888776543 599999877532 122 3334443 68889999888888888
Q ss_pred cCCce--EEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEE----cCCCcEE
Q psy9770 723 SGDYE--LLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATG----DDFGKLK 796 (811)
Q Consensus 723 s~Dg~--i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~----~~dg~v~ 796 (811)
..|+. |.+|++.+|+.+..+. .+...|..++++|+++.|+.. ...+.|+
T Consensus 354 ~~~g~~~l~~~~~~~g~~~~~l~-------------------------~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~ 408 (710)
T 2xdw_A 354 LHDVKNTLQLHDLATGALLKIFP-------------------------LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIY 408 (710)
T ss_dssp EETTEEEEEEEETTTCCEEEEEC-------------------------CCSSEEEEEECCTTCSEEEEEEECSSCCCEEE
T ss_pred EECCEEEEEEEECCCCCEEEecC-------------------------CCCceEEEEecCCCCCEEEEEEeCCCCCCEEE
Confidence 88874 6667776665433221 124568889999999766633 2457899
Q ss_pred EEeCCCCC
Q psy9770 797 LYSYPAVQ 804 (811)
Q Consensus 797 vw~~~~~~ 804 (811)
+||+.+++
T Consensus 409 ~~d~~tg~ 416 (710)
T 2xdw_A 409 HCDLTKEE 416 (710)
T ss_dssp EEETTSSS
T ss_pred EEECCCCc
Confidence 99998877
No 200
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.57 E-value=2.2e-13 Score=160.36 Aligned_cols=281 Identities=9% Similarity=-0.092 Sum_probs=181.1
Q ss_pred CCCCCeEEEECCC---cEEEEEEcC-CceeeeecccccccCCCCceEEEEEEcCCCcEEE------EcCCCcEEEEecCC
Q psy9770 410 PLDRNNIVTCGKS---HINFWTIDA-GGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLS------GDSNGNIIVWTRGS 479 (811)
Q Consensus 410 p~~~~ll~~~~d~---~i~iwd~~~-~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~lls------g~~dg~I~vwd~~~ 479 (811)
|+++.++....++ .-.+|.... +.....+...-....+|...+..++|+|||+.++ |+.+..|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 6677777666542 455666542 2222111111010134556789999999999442 23346899999999
Q ss_pred ceEEEEeecccccce--EEEEEecCCcEEEEecCCCc-------------EEEEeCCCCCccceeeeccccCCeEEEeeC
Q psy9770 480 NTISKFIRNVHEGSV--FSICVLKEGSIISAGGKDGR-------------LLQFDSNLQPTGYEAQIAEHLGGIRTVSEG 544 (811)
Q Consensus 480 ~~~~~~~~~~h~~~V--~~l~~s~dg~~l~s~s~dg~-------------I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~ 544 (811)
++.... .+...+ ..++|+|||+.|+.++.|.. |++|++.+.......
T Consensus 157 g~~~~~---~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~l--------------- 218 (695)
T 2bkl_A 157 GEWSKV---DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTV--------------- 218 (695)
T ss_dssp CCBCSS---CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEE---------------
T ss_pred CCCcCC---cccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceE---------------
Confidence 886511 122222 67899999999998887664 555555443320000
Q ss_pred CCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCC----eEEEEeCCCCcEEEEecCCCCeE
Q psy9770 545 RGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDR----IVQLWDSMSHSVVWSKDIAEQAQ 620 (811)
Q Consensus 545 ~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg----~v~iwd~~~~~~~~~~~~~~~v~ 620 (811)
......|...+..+.|+|||++|+..+.++ .|.+|+..+++..........+.
T Consensus 219 -----------------------v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 275 (695)
T 2bkl_A 219 -----------------------VHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKY 275 (695)
T ss_dssp -----------------------EECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCE
T ss_pred -----------------------EEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceE
Confidence 001112445678999999999998887666 78888776666555444555566
Q ss_pred EEEEcCCCCEEEEEEe----CCeEEEEecCCcce---eEEecCC-CCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCc
Q psy9770 621 SATFSPDGSIIIVGCI----AGRWLVMDSETREA---YSIHTDG-NEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR 692 (811)
Q Consensus 621 ~~~~spdg~~la~g~~----dg~i~i~d~~~~~~---~~~~~~~-~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~ 692 (811)
...+ ++|. +++.+. ++.|.+||+.+++. ...+..+ ...+..++|+ ++.++++...|+..+||.+...+
T Consensus 276 ~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g- 351 (695)
T 2bkl_A 276 EVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKG- 351 (695)
T ss_dssp EEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC-
T ss_pred EEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC-
Confidence 6666 6777 555554 57899999987753 3333333 4567888898 77888888999999998876322
Q ss_pred ceeEEEEecCC-CCCeeEEEeCCCCCeEE----EecCCceEEEEECCCCc
Q psy9770 693 KYSRVGRCTGH-SSFITHLDWSEDSMYIR----SNSGDYELLYWNAGTCR 737 (811)
Q Consensus 693 ~~~~~~~~~~h-~~~V~~l~~spdg~~L~----s~s~Dg~i~iWd~~~~~ 737 (811)
.....+..+ .+.|..+.++||++.|+ +....++|++||+.+++
T Consensus 352 --~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 352 --KPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp --CEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred --CeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 233345444 66788899999998777 33346899999998876
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.56 E-value=2.8e-12 Score=135.99 Aligned_cols=301 Identities=10% Similarity=-0.048 Sum_probs=203.4
Q ss_pred EEEecCCCCcEEEEEeCC---CCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC----------CCc
Q psy9770 357 LSFSKADGGTFLCAVDEG---NDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG----------KSH 423 (811)
Q Consensus 357 l~fs~~~dg~~Lasv~~s---~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~----------d~~ 423 (811)
....| ++..++..... .++.|.+.|..+.+ .+..+.....+ . ++++|+++.++++.. ++.
T Consensus 38 ~~~~p--d~~~vyV~~~~~~~~~~~V~ViD~~t~~---v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~ 110 (386)
T 3sjl_D 38 EAPAP--DARRVYVNDPAHFAAVTQQFVIDGEAGR---VIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDY 110 (386)
T ss_dssp CCCCC--CTTEEEEEECGGGCSSEEEEEEETTTTE---EEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred eccCC--CCCEEEEEcCcccCCCCEEEEEECCCCe---EEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCE
Confidence 34456 78777764322 26899999999998 88888877776 4 999999999988862 578
Q ss_pred EEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcE-EEEc--CCCcEEEEecCCceEEEEeecccccceEEEEEe
Q psy9770 424 INFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEV-LSGD--SNGNIIVWTRGSNTISKFIRNVHEGSVFSICVL 500 (811)
Q Consensus 424 i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~l-lsg~--~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s 500 (811)
|.+||..+.+.+....-....-.........++|+|||+. +++. .++.|.++|+.+++.+..+... + . ...+.
T Consensus 111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g-~-~~~~P 186 (386)
T 3sjl_D 111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--D-C-YHIFP 186 (386)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--S-E-EEEEE
T ss_pred EEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC--C-c-ceeec
Confidence 9999999776655442100000000112456899999993 4444 3689999999999999888621 1 1 12233
Q ss_pred cCCcEEEEecCCCcEEEEeCCC-CCcccee--eeccccCCeE-EEee-CCCCeEEEEeCCCeEEEEEccCCceeeeee--
Q psy9770 501 KEGSIISAGGKDGRLLQFDSNL-QPTGYEA--QIAEHLGGIR-TVSE-GRGSQLIVGTTRNCILVGSLNLGFSPVVLG-- 573 (811)
Q Consensus 501 ~dg~~l~s~s~dg~I~~wd~~~-~~~~~~~--~~~~~~~~v~-~l~~-~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~-- 573 (811)
...+.+++.+.||.+.+.++.. ++..... .+......+. ...+ .+++.++..+.++.+++.|+.+........
T Consensus 187 ~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~ 266 (386)
T 3sjl_D 187 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVE 266 (386)
T ss_dssp EETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEE
T ss_pred CCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeeccee
Confidence 3345666677788888888865 3331101 0000111111 1233 467877778889999999997653322211
Q ss_pred -----------cccceEEEEECCCCCeEEEEEC----------CCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCC-EE
Q psy9770 574 -----------HTDELWALAAHPSLSQFLTAGF----------DRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGS-II 631 (811)
Q Consensus 574 -----------h~~~v~~l~~sp~~~~l~s~s~----------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~-~l 631 (811)
..+....++++++++.++.... .+.|.+.|+.+++.+..+.....+..++|++|++ +|
T Consensus 267 ~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~l 346 (386)
T 3sjl_D 267 ALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLL 346 (386)
T ss_dssp SSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEE
T ss_pred ccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEE
Confidence 1223345778999988777643 2579999999999999988888899999999997 66
Q ss_pred EEEE-eCCeEEEEecCCcceeEEecCCCCCeEEEEEccC
Q psy9770 632 IVGC-IAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPD 669 (811)
Q Consensus 632 a~g~-~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spd 669 (811)
++.. .++.|.++|..+++.+..+.... .-+.|.+++|
T Consensus 347 y~tn~~~~~VsViD~~t~k~~~~i~~~~-~p~~l~~s~d 384 (386)
T 3sjl_D 347 YALSTGDKTLYIHDAESGEELRSVNQLG-HGPQVITTAD 384 (386)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECCCC-SSCCEEEECC
T ss_pred EEEcCCCCeEEEEECCCCcEEEEecCCC-CCceeEECCc
Confidence 6654 48899999999999999887543 3455667766
No 202
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.55 E-value=9.3e-13 Score=135.58 Aligned_cols=189 Identities=11% Similarity=0.063 Sum_probs=148.6
Q ss_pred CCCCeEEEEeCCCeEEEEEccCC-ceeeeeecc-cceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCC--CCe
Q psy9770 544 GRGSQLIVGTTRNCILVGSLNLG-FSPVVLGHT-DELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIA--EQA 619 (811)
Q Consensus 544 ~~~~~l~~~~~~~~i~~~d~~~~-~~~~~~~h~-~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~--~~v 619 (811)
+|+..+++++.++.|++||.+++ ....+..+. ..+.++++.|+|++|+ +.++.|..||. +++.++.+... ..+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 56777888889999999999666 344444444 4788999999999888 45788999999 89999997654 478
Q ss_pred EEEEEcCCCCEEEEEEe-CCeEEEEecCCcceeEEecC------CCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCc
Q psy9770 620 QSATFSPDGSIIIVGCI-AGRWLVMDSETREAYSIHTD------GNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR 692 (811)
Q Consensus 620 ~~~~~spdg~~la~g~~-dg~i~i~d~~~~~~~~~~~~------~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~ 692 (811)
.++.+.++|+++++.+. ++.+..+|. +++.+..+.. +......+++.++|++|++...++.|.+||.. ++
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~- 156 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ- 156 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC-
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC-
Confidence 89999999999999887 788888886 6777666542 11245567889999999999999999999987 64
Q ss_pred ceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCC
Q psy9770 693 KYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQS 742 (811)
Q Consensus 693 ~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~ 742 (811)
.+.++..+ ..+.++.+.++|+++++++.++.|..+|..+|+.+-.+
T Consensus 157 ---~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 157 ---LLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp ---EEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred ---EEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 33344433 34667888999999999988889999999999876543
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.55 E-value=2.6e-11 Score=126.17 Aligned_cols=275 Identities=9% Similarity=-0.034 Sum_probs=195.7
Q ss_pred cccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeC-CCeEEEEEccCCce
Q psy9770 490 HEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTT-RNCILVGSLNLGFS 568 (811)
Q Consensus 490 h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~-~~~i~~~d~~~~~~ 568 (811)
....+.++++.++|++.++...++.|.+||.. +.. ....+......+..+++.+++.++++.. .+.|..+|.. +..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-KEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-EEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 45678899999999988877778999999988 544 2333444446788899999888888776 6789999988 433
Q ss_pred eeee--ecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEE-ec-CCCCeEEEEEcCCCCEEEEEEeCCeEEEEe
Q psy9770 569 PVVL--GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWS-KD-IAEQAQSATFSPDGSIIIVGCIAGRWLVMD 644 (811)
Q Consensus 569 ~~~~--~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~-~~-~~~~v~~~~~spdg~~la~g~~dg~i~i~d 644 (811)
..+. .....+.++++.+++.++++...++.|..||.. ++.... .. ....+..+++.++|+++++...++.|..||
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 3222 234678999999999888877778899999987 555432 22 345789999999999666655578999999
Q ss_pred cCCcceeEE-ecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEec
Q psy9770 645 SETREAYSI-HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNS 723 (811)
Q Consensus 645 ~~~~~~~~~-~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s 723 (811)
. +++.... ...+...+..+++.++|+++++....+.|.+|+. ++. ... ..+..+...+.+++++++|+++++..
T Consensus 174 ~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~--~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 174 N-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE--ISE-YDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC--EEE-EECSSTTCCEEEEEECSTTCEEEEET
T ss_pred C-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc--EEE-EECCCCCCCceEEEECCCCCEEEecc
Confidence 8 5554432 2234456889999999987777666678999987 332 111 12334556789999999999888777
Q ss_pred CCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeC
Q psy9770 724 GDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSY 800 (811)
Q Consensus 724 ~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~ 800 (811)
.++.|..|+. +++... .. .......+.++++.++|+++++.. . .|..++.
T Consensus 249 ~~~~i~~~~~-~g~~~~-~~-----------------------~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 249 GANQIGRITN-DNTIQE-YQ-----------------------LQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp TTTEEEEECT-TSCEEE-EE-----------------------CCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCCeEEEECC-CCcEEE-EE-----------------------CCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 7889999998 343221 00 011234588999999999777665 4 6766664
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.54 E-value=1.1e-11 Score=133.34 Aligned_cols=267 Identities=13% Similarity=0.051 Sum_probs=181.0
Q ss_pred cEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEec----------CCCcEEEEeCCCCCccceeeeccccCCeEE
Q psy9770 471 NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGG----------KDGRLLQFDSNLQPTGYEAQIAEHLGGIRT 540 (811)
Q Consensus 471 ~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s----------~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~ 540 (811)
.|.+||..+++.+..+. ....+ .++++|||++|+.+. .++.|.+||..+.+......+.+
T Consensus 48 ~v~v~D~~t~~~~~~i~-~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~------- 117 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVN-GGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD------- 117 (373)
T ss_pred EEEEEECCCCeEEEEec-CCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC-------
Confidence 88999999999888876 22333 999999999998775 36778899987655411111110
Q ss_pred EeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEEC--CCeEEEEeCCCCcEEEE-ecCCC
Q psy9770 541 VSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGF--DRIVQLWDSMSHSVVWS-KDIAE 617 (811)
Q Consensus 541 l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~--dg~v~iwd~~~~~~~~~-~~~~~ 617 (811)
.. ... +......++++|||++|+.+.. ++.|.++| .+++.+.. +....
T Consensus 118 -----~~---------------------~~~--~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~ 168 (373)
T 2mad_H 118 -----AP---------------------RFD--VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT 168 (373)
T ss_pred -----cc---------------------ccc--cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc
Confidence 00 000 0122347899999999998874 57899999 99998877 66544
Q ss_pred CeEEEEEcCCC-CEEEEEEeCCeEEEEecCCcceeEEec-----CCCCC-eEEEEEccCCCEEEEEecCCcEEEEEecCC
Q psy9770 618 QAQSATFSPDG-SIIIVGCIAGRWLVMDSETREAYSIHT-----DGNEP-IQVVKFSPDGKLLALGSRDNYIYVYEVSGD 690 (811)
Q Consensus 618 ~v~~~~~spdg-~~la~g~~dg~i~i~d~~~~~~~~~~~-----~~~~~-i~~i~~spdg~~lasgs~dg~I~iwd~~~~ 690 (811)
. +.+.|++ +.+++.+.||.+.++|. +++...... ....+ .....|.+++..++..+..+.+.+.|+...
T Consensus 169 ~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 169 C---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred e---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCC
Confidence 3 4455655 34556678999999999 877663322 11222 233567777766555557889999998764
Q ss_pred CcceeEEEEecC----------CCCCeeEEEeCCCCCeEEEecC----------CceEEEEECCCCcccCCCCCccceeE
Q psy9770 691 SRKYSRVGRCTG----------HSSFITHLDWSEDSMYIRSNSG----------DYELLYWNAGTCRQIPQSSQLRDVVW 750 (811)
Q Consensus 691 ~~~~~~~~~~~~----------h~~~V~~l~~spdg~~L~s~s~----------Dg~i~iWd~~~~~~~~~~~~~~~~~~ 750 (811)
... .+..+.- .......+.++||++.|.++.. .+.|.++|+.+++.+..+..
T Consensus 245 ~~~--v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~------ 316 (373)
T 2mad_H 245 GAT--NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL------ 316 (373)
T ss_pred cce--EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC------
Confidence 321 1122210 1222444789999988777543 35799999999887765421
Q ss_pred eccceeeccceeeeCCCCCCCCccceEEecCCCC-EEEEEc-CCCcEEEEeCCCCCCCCc
Q psy9770 751 ESNSCTLTFTTIGIWPEGADGTDVNSCERSHDAR-VIATGD-DFGKLKLYSYPAVQPKLC 808 (811)
Q Consensus 751 ~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~-~Las~~-~dg~v~vw~~~~~~~~~~ 808 (811)
+....+++|+|||+ +|+++. .++.|.|||..+++.++.
T Consensus 317 --------------------g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 317 --------------------GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred --------------------CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 33578999999999 777776 589999999999988766
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.53 E-value=3.5e-12 Score=134.04 Aligned_cols=238 Identities=13% Similarity=0.049 Sum_probs=171.4
Q ss_pred ccceEEEEEecCCcEEEE-------ecCCCcEEEEeCCCCCccceeee---ccccCCeEEEeeCCC-CeEEEEeCCCeEE
Q psy9770 491 EGSVFSICVLKEGSIISA-------GGKDGRLLQFDSNLQPTGYEAQI---AEHLGGIRTVSEGRG-SQLIVGTTRNCIL 559 (811)
Q Consensus 491 ~~~V~~l~~s~dg~~l~s-------~s~dg~I~~wd~~~~~~~~~~~~---~~~~~~v~~l~~~~~-~~l~~~~~~~~i~ 559 (811)
-....+++|.++|.++++ +..++.|.+||...++. ..... .++...+..+++.++ +.+++++..+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKK-TVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCE-EEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcE-EEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEE
Confidence 345678999999988887 56788999999876665 21111 123456888999998 9999988777899
Q ss_pred EEEccCCceeee-ee-----cccceEEEEECCCCCeEEEEECC---------------CeEEEEeCCCCcEEEEecCCCC
Q psy9770 560 VGSLNLGFSPVV-LG-----HTDELWALAAHPSLSQFLTAGFD---------------RIVQLWDSMSHSVVWSKDIAEQ 618 (811)
Q Consensus 560 ~~d~~~~~~~~~-~~-----h~~~v~~l~~sp~~~~l~s~s~d---------------g~v~iwd~~~~~~~~~~~~~~~ 618 (811)
+|+.. +....+ .. ....+.+++++++++++++...+ +.|..||.. ++..........
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~ 173 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF 173 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC
Confidence 99988 543332 11 12358899999999888777655 578888776 554443333445
Q ss_pred eEEEEEc----CCCCEEEEEE-eCCeEEEEecC-Ccc-----eeEEecCCC-CCeEEEEEccCCCEEEEEecCCcEEEEE
Q psy9770 619 AQSATFS----PDGSIIIVGC-IAGRWLVMDSE-TRE-----AYSIHTDGN-EPIQVVKFSPDGKLLALGSRDNYIYVYE 686 (811)
Q Consensus 619 v~~~~~s----pdg~~la~g~-~dg~i~i~d~~-~~~-----~~~~~~~~~-~~i~~i~~spdg~~lasgs~dg~I~iwd 686 (811)
...++|+ |+|+.|+++. .++.|.+||.. +++ ....+..+. .....++++++|+++++...++.|.+|+
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d 253 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG 253 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEc
Confidence 7889999 9997766654 57899999976 343 233334343 5578899999999888877788999999
Q ss_pred ecCCCcceeEEEEecCCCCCeeEEEeCCCCCe-EEEecCCceEEEEECCC
Q psy9770 687 VSGDSRKYSRVGRCTGHSSFITHLDWSEDSMY-IRSNSGDYELLYWNAGT 735 (811)
Q Consensus 687 ~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~-L~s~s~Dg~i~iWd~~~ 735 (811)
..++. .+..+..+...+.+++|+++++. +++...++.|..|++..
T Consensus 254 ~~~g~----~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 254 PDGGQ----PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTCBS----CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCc----EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 87543 22334456678999999999994 45556678999999875
No 206
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.51 E-value=3.4e-12 Score=131.36 Aligned_cols=213 Identities=9% Similarity=0.002 Sum_probs=162.1
Q ss_pred CCCcEEEEcCCCcEEEEecCCceEEEEeecccc-cceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCC
Q psy9770 459 QGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHE-GSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGG 537 (811)
Q Consensus 459 ~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~-~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~ 537 (811)
|+..+++++.++.|.+||.++++.+..+. .+. ..+.++.+.|+|++|+ +.++.|..||. +++........ ....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~-~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~-~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYP-LEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP-AGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEE-CCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC-TTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeC-CCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC-CCcc
Confidence 44446799999999999999999999887 454 4788999999999998 34788999999 55553333332 1235
Q ss_pred eEEEeeCCCCeEEEEe-C-CCeEEEEEccCCceeeee------ecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcE
Q psy9770 538 IRTVSEGRGSQLIVGT-T-RNCILVGSLNLGFSPVVL------GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSV 609 (811)
Q Consensus 538 v~~l~~~~~~~l~~~~-~-~~~i~~~d~~~~~~~~~~------~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~ 609 (811)
+..+.+.+++.++++. . .+.+..++.+......+. .+......+++.++++++++...++.|..||.. ++.
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 6777788887777664 3 567877776554333322 222345567789999999999999999999998 999
Q ss_pred EEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCC------CCeEEEEEccCCCEEEEEe
Q psy9770 610 VWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGN------EPIQVVKFSPDGKLLALGS 677 (811)
Q Consensus 610 ~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~------~~i~~i~~spdg~~lasgs 677 (811)
++.+.....+.++.+.++|..++++..++.|..+|..+++.+..+.... ..+..++..++|.++++..
T Consensus 158 ~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9998877778888999999999998888899999999999988875322 2267777888888777653
No 207
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.50 E-value=1.8e-12 Score=152.40 Aligned_cols=287 Identities=9% Similarity=0.009 Sum_probs=183.4
Q ss_pred cCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEecc----CCccccEEEEEEecCCCCcEEEEE---eCCCCceEE
Q psy9770 308 HPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGI----GEFERSISCLSFSKADGGTFLCAV---DEGNDYNIS 380 (811)
Q Consensus 308 spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~----~~h~~~V~~l~fs~~~dg~~Lasv---~~s~d~~i~ 380 (811)
+|||++++....++ ....+.|.+.+...++....+.. .+|...+..++||| ||++||.. +|+.+.+|+
T Consensus 76 ~~dG~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SP--DG~~la~~~~~~G~~~~~i~ 150 (695)
T 2bkl_A 76 SRRNGRFFYVRTHK---DKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSW--DGKKVAFAQKPNAADEAVLH 150 (695)
T ss_dssp EEETTEEEEEEECT---TCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECT--TSSEEEEEEEETTCSCCEEE
T ss_pred EEECCEEEEEEEcC---CCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECC--CCCEEEEEECCCCCceEEEE
Confidence 47888888776654 11123556666656654444331 24566799999999 89999843 245568999
Q ss_pred EEEcccCCCcceEEEeeeCCCcE--EEEEecCCCCCeEEEECCCc-------------EEEEEEcCCceeeeeccccccc
Q psy9770 381 VWDWQKSDRGHKITETKCSVDTV--VAAEFHPLDRNNIVTCGKSH-------------INFWTIDAGGTLYKKQGIFEMI 445 (811)
Q Consensus 381 vWd~~~~~~~~~~~~~~~~~~~V--~~v~fsp~~~~ll~~~~d~~-------------i~iwd~~~~~~~~~~~~~~~~l 445 (811)
+||+.+++ .+. ..+...+ ..++|+|++..++.+..+.. |++|++.++...... .+..
T Consensus 151 v~dl~tg~---~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~l--v~~~- 222 (695)
T 2bkl_A 151 VIDVDSGE---WSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTV--VHER- 222 (695)
T ss_dssp EEETTTCC---BCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEE--EECC-
T ss_pred EEECCCCC---CcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceE--EEec-
Confidence 99999988 330 1111222 67999999998888887655 999999866421111 1111
Q ss_pred CCCCceEEEEEEcCCCc-EEEEcCCC----cEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEec---CCCcEEE
Q psy9770 446 RDKPKYVTCLAFTQGGE-VLSGDSNG----NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGG---KDGRLLQ 517 (811)
Q Consensus 446 ~~~~~~v~~l~~s~~g~-llsg~~dg----~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s---~dg~I~~ 517 (811)
.++...+..+.|+|||+ ++.++.++ .|++|+..+++..... .+...+....+ ++|.+++... .++.|.+
T Consensus 223 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~--~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~ 299 (695)
T 2bkl_A 223 TGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLV--KGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFE 299 (695)
T ss_dssp CCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEE--ECSSCCEEEEE-ETTEEEEEECTTCTTCEEEE
T ss_pred CCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEee--cCCCceEEEEe-cCCcEEEEECCCCCCCEEEE
Confidence 34556788999999999 44444444 7888877666544433 35556666666 5666545444 2578999
Q ss_pred EeCCCCCccc-eeeeccc-cCCeEEEeeCCCCeEEEEeCCCeEEEEEcc--CCceeeeeec-ccceEEEEECCCCCeEEE
Q psy9770 518 FDSNLQPTGY-EAQIAEH-LGGIRTVSEGRGSQLIVGTTRNCILVGSLN--LGFSPVVLGH-TDELWALAAHPSLSQFLT 592 (811)
Q Consensus 518 wd~~~~~~~~-~~~~~~~-~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~--~~~~~~~~~h-~~~v~~l~~sp~~~~l~s 592 (811)
||+....... ...+..+ ...+..+++..+..+++...++...+|.+. .+....+..+ .+.+..++++|+++.++.
T Consensus 300 ~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~ 379 (695)
T 2bkl_A 300 VDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYY 379 (695)
T ss_dssp EBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEE
T ss_pred EeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEE
Confidence 9997654211 2223333 345677777755555666777766666544 4434444444 567888899999987664
Q ss_pred EE----CCCeEEEEeCCCCcEE
Q psy9770 593 AG----FDRIVQLWDSMSHSVV 610 (811)
Q Consensus 593 ~s----~dg~v~iwd~~~~~~~ 610 (811)
.. ..++|++||+.+++..
T Consensus 380 ~~ss~~~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 380 VFTSFTTPRQIYKTSVSTGKSE 401 (695)
T ss_dssp EEEETTEEEEEEEEETTTCCEE
T ss_pred EEcCCCCCCEEEEEECCCCcEE
Confidence 33 3478999999887754
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=7.6e-12 Score=148.24 Aligned_cols=292 Identities=9% Similarity=-0.039 Sum_probs=178.5
Q ss_pred cCCCCCeEEEECCC---cEEEEEEcC----CceeeeecccccccCCCCceEEEEEEcCCCcEE-E-EcCC----CcEEEE
Q psy9770 409 HPLDRNNIVTCGKS---HINFWTIDA----GGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVL-S-GDSN----GNIIVW 475 (811)
Q Consensus 409 sp~~~~ll~~~~d~---~i~iwd~~~----~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~ll-s-g~~d----g~I~vw 475 (811)
.|+++.++....++ .-.+|.... +.....+...-.-..++...+..++|+|||+.+ . .+.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 37777777766542 366777653 222211111000002233568899999999943 3 3322 359999
Q ss_pred ecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCC
Q psy9770 476 TRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTR 555 (811)
Q Consensus 476 d~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~ 555 (811)
|+.+++.+... .+...+..++|+|| +.|+.+..++... .... --....
T Consensus 195 dl~tg~~~~~~--~~~~~~~~~~wspD-~~l~~~~~~~~~~-----~~~~------------------------~~~~~~ 242 (741)
T 1yr2_A 195 GVADGKPLADE--LKWVKFSGLAWLGN-DALLYSRFAEPKE-----GQAF------------------------QALNYN 242 (741)
T ss_dssp ETTTCCEEEEE--EEEEESCCCEESTT-SEEEEEECCCC-------------------------------------CCCC
T ss_pred ECCCCCCCCcc--CCCceeccEEEECC-CEEEEEEecCccc-----cccc------------------------ccCCCC
Confidence 99999876542 23333467899999 8888777655310 0000 000011
Q ss_pred CeEEEEEccCCce---eeeee--cccceEEEEECCCCCeEEEEECCC-----eEEEEeCCCC--c-EEEEecCCCCeEEE
Q psy9770 556 NCILVGSLNLGFS---PVVLG--HTDELWALAAHPSLSQFLTAGFDR-----IVQLWDSMSH--S-VVWSKDIAEQAQSA 622 (811)
Q Consensus 556 ~~i~~~d~~~~~~---~~~~~--h~~~v~~l~~sp~~~~l~s~s~dg-----~v~iwd~~~~--~-~~~~~~~~~~v~~~ 622 (811)
..|++|++.++.. ..... +...+..+.|+|||++|+..+.++ .|.+||+.++ + ..............
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 322 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF 322 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE
Confidence 2344555443321 11111 223578899999999988877544 8999999877 4 33333444444444
Q ss_pred EEcCCCCEEEEEEeC----CeEEEEecCCc--ceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeE
Q psy9770 623 TFSPDGSIIIVGCIA----GRWLVMDSETR--EAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSR 696 (811)
Q Consensus 623 ~~spdg~~la~g~~d----g~i~i~d~~~~--~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~ 696 (811)
++|+|+.|+..+.+ +.|.+||+.++ +....+..+...+..+.|+ ++.++++...|+..+||.+...+ ..
T Consensus 323 -~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g---~~ 397 (741)
T 1yr2_A 323 -VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG---KP 397 (741)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS---CE
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC---Cc
Confidence 34999999988764 45999999874 3344444555557778887 66778888889988888776322 23
Q ss_pred EEEecC-CCCCeeEEEeCCCCCeEE----EecCCceEEEEECCCCc
Q psy9770 697 VGRCTG-HSSFITHLDWSEDSMYIR----SNSGDYELLYWNAGTCR 737 (811)
Q Consensus 697 ~~~~~~-h~~~V~~l~~spdg~~L~----s~s~Dg~i~iWd~~~~~ 737 (811)
...+.. +.+.|..+.++||++.|+ +....++|++||+.+++
T Consensus 398 ~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 398 AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 334443 366788999999998766 33346899999998876
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.48 E-value=2e-11 Score=128.26 Aligned_cols=241 Identities=10% Similarity=0.093 Sum_probs=168.3
Q ss_pred cccCCeEEEeeCCCCeEEEE--------eCCCeEEEEEccCCceeeeee-----cccceEEEEECCC-CCeEEEEECCCe
Q psy9770 533 EHLGGIRTVSEGRGSQLIVG--------TTRNCILVGSLNLGFSPVVLG-----HTDELWALAAHPS-LSQFLTAGFDRI 598 (811)
Q Consensus 533 ~~~~~v~~l~~~~~~~l~~~--------~~~~~i~~~d~~~~~~~~~~~-----h~~~v~~l~~sp~-~~~l~s~s~dg~ 598 (811)
........+++.+++.++++ +.++.|++|+..++....+.. +...+.+++++++ +.++++ +..+.
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~ 93 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLG 93 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTE
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCC
Confidence 33445677888888888877 667899999987765444433 5567899999999 654544 44558
Q ss_pred EEEEeCCCCcEEEE-ecC-----CCCeEEEEEcCCCCEEEEEEeC---------------CeEEEEecCCcceeEEecCC
Q psy9770 599 VQLWDSMSHSVVWS-KDI-----AEQAQSATFSPDGSIIIVGCIA---------------GRWLVMDSETREAYSIHTDG 657 (811)
Q Consensus 599 v~iwd~~~~~~~~~-~~~-----~~~v~~~~~spdg~~la~g~~d---------------g~i~i~d~~~~~~~~~~~~~ 657 (811)
|.+||.. ++.... ... ...+.+++++++|+++++...+ +.|..||.. ++...... +
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-~ 170 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-A 170 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-E
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-C
Confidence 9999988 665433 221 1347899999999887776554 578888876 55433322 2
Q ss_pred CCCeEEEEEc----cCCCEEEEE-ecCCcEEEEEec-CCCc-ceeEEEEecCCC-CCeeEEEeCCCCCeEEEecCCceEE
Q psy9770 658 NEPIQVVKFS----PDGKLLALG-SRDNYIYVYEVS-GDSR-KYSRVGRCTGHS-SFITHLDWSEDSMYIRSNSGDYELL 729 (811)
Q Consensus 658 ~~~i~~i~~s----pdg~~lasg-s~dg~I~iwd~~-~~~~-~~~~~~~~~~h~-~~V~~l~~spdg~~L~s~s~Dg~i~ 729 (811)
......++|+ ++|+.|+++ ..++.|++|++. .+.. .......+.++. ..+..++++++|+++++...++.|.
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 3456889999 999766555 457899999987 3311 112333444454 6688999999999988887888999
Q ss_pred EEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCC-EEEEEcCCCcEEEEeCCC
Q psy9770 730 YWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDAR-VIATGDDFGKLKLYSYPA 802 (811)
Q Consensus 730 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~-~Las~~~dg~v~vw~~~~ 802 (811)
+||..+++.+..+. .+...+.+++|+++|+ ++++...++.|..|++..
T Consensus 251 ~~d~~~g~~~~~~~-------------------------~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 251 VFGPDGGQPKMRIR-------------------------CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EECTTCBSCSEEEE-------------------------CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEcCCCCcEeEEEe-------------------------CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99998776443211 1134688999999999 455566678899999875
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.46 E-value=3.3e-12 Score=138.01 Aligned_cols=274 Identities=9% Similarity=0.006 Sum_probs=182.1
Q ss_pred eEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeC--------CCCceEEEEEcccCCCcceEEEeeeC--
Q psy9770 330 HIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDE--------GNDYNISVWDWQKSDRGHKITETKCS-- 399 (811)
Q Consensus 330 ~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~--------s~d~~i~vWd~~~~~~~~~~~~~~~~-- 399 (811)
.|.++|..+++.+.++..+. .. .++|+| ||++|+.... ..++.|.++|..+.+ .+..+...
T Consensus 100 ~VsVID~~t~~vv~~I~vG~--~P--gia~Sp--Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~---vv~~I~v~g~ 170 (426)
T 3c75_H 100 QQFVIDGSTGRILGMTDGGF--LP--HPVAAE--DGSFFAQASTVFERIARGKRTDYVEVFDPVTFL---PIADIELPDA 170 (426)
T ss_dssp EEEEEETTTTEEEEEEEECS--SC--EEEECT--TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC---EEEEEEETTC
T ss_pred eEEEEECCCCEEEEEEECCC--CC--ceEECC--CCCEEEEEeccccccccCCCCCEEEEEECCCCc---EEEEEECCCc
Confidence 89999999999999998543 33 799999 8888876321 146799999999998 77776542
Q ss_pred -----CCcEEEEEecCCCCCeEEEEC--CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc--EEEEcCCC
Q psy9770 400 -----VDTVVAAEFHPLDRNNIVTCG--KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE--VLSGDSNG 470 (811)
Q Consensus 400 -----~~~V~~v~fsp~~~~ll~~~~--d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~--llsg~~dg 470 (811)
......+.|+|++++++++.. ++.|.+.|+.+.+.+....- . . +....|++. +++.+.||
T Consensus 171 ~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v-----~---g---~~~~~p~g~~~~v~~~~dG 239 (426)
T 3c75_H 171 PRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV-----P---D---CYHIFPASPTVFYMNCRDG 239 (426)
T ss_dssp CCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC-----C---S---EEEEEEEETTEEEEEETTS
T ss_pred cccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc-----C---C---ceeeccCCCcEEEEEcCCC
Confidence 234567899999999999874 57899999997765554321 0 1 122333332 45666777
Q ss_pred cEEEEecCCceEEEE----eecccccce-EEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCC
Q psy9770 471 NIIVWTRGSNTISKF----IRNVHEGSV-FSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGR 545 (811)
Q Consensus 471 ~I~vwd~~~~~~~~~----~~~~h~~~V-~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~ 545 (811)
.+.+.+..+++.... +. ....++ ..+.|.+++..++.....+.|.+.|...........
T Consensus 240 ~~~~V~~~~~~v~~~~~~~~~-v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~--------------- 303 (426)
T 3c75_H 240 SLARVDFADGETKVTNTEVFH-TEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAP--------------- 303 (426)
T ss_dssp SEEEEECCTTCCEEEECCCCS-CTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCC---------------
T ss_pred CEEEEECCCCcEEEEeeeeec-cCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeee---------------
Confidence 777777755544422 11 111111 134567777766666677888888875443200000
Q ss_pred CCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEEC----------CCeEEEEeCCCCcEEEEecC
Q psy9770 546 GSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGF----------DRIVQLWDSMSHSVVWSKDI 615 (811)
Q Consensus 546 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~----------dg~v~iwd~~~~~~~~~~~~ 615 (811)
|.+.................++++|++++++.... ++.|.++|+.+.+.+..+..
T Consensus 304 ---------------~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v 368 (426)
T 3c75_H 304 ---------------IEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL 368 (426)
T ss_dssp ---------------EESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred ---------------eeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC
Confidence 00000000000000111123578898887666542 35799999999999999887
Q ss_pred CCCeEEEEEcCCCC-EEEEEE-eCCeEEEEecCCcceeEEe
Q psy9770 616 AEQAQSATFSPDGS-IIIVGC-IAGRWLVMDSETREAYSIH 654 (811)
Q Consensus 616 ~~~v~~~~~spdg~-~la~g~-~dg~i~i~d~~~~~~~~~~ 654 (811)
......++|+|||+ ++++.. .++.|.++|+.+++.+..+
T Consensus 369 g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 369 GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 77899999999999 888887 4899999999999999887
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.45 E-value=4e-12 Score=137.41 Aligned_cols=273 Identities=14% Similarity=0.115 Sum_probs=184.1
Q ss_pred CcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEec----------CCCcEEEEeCCCCCccceeeeccccCCeE
Q psy9770 470 GNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGG----------KDGRLLQFDSNLQPTGYEAQIAEHLGGIR 539 (811)
Q Consensus 470 g~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s----------~dg~I~~wd~~~~~~~~~~~~~~~~~~v~ 539 (811)
+.|.++|..+++.+..+..+ ..+ .++++|||++|+.+. .++.|.++|..+.+......+.+..
T Consensus 99 ~~VsVID~~t~~vv~~I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~---- 171 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP---- 171 (426)
T ss_dssp EEEEEEETTTTEEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC----
T ss_pred CeEEEEECCCCEEEEEEECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc----
Confidence 79999999999999998733 344 899999999888765 3678999998877652222111000
Q ss_pred EEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEEC--CCeEEEEeCCCCcEEEEecCCC
Q psy9770 540 TVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGF--DRIVQLWDSMSHSVVWSKDIAE 617 (811)
Q Consensus 540 ~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~--dg~v~iwd~~~~~~~~~~~~~~ 617 (811)
.. ........++|+||+++++.+.. ++.|.+.|+.+++.+..+....
T Consensus 172 -----------------------------r~--~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g 220 (426)
T 3c75_H 172 -----------------------------RF--LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD 220 (426)
T ss_dssp -----------------------------CC--CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred -----------------------------cc--ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC
Confidence 00 00112346789999999998874 5789999999999988876654
Q ss_pred CeEEEEEcCCC-CEEEEEEeCCeEEEEecCCcceeEE----ecCCCCCe-EEEEEccCCCEEEEEecCCcEEEEEecCCC
Q psy9770 618 QAQSATFSPDG-SIIIVGCIAGRWLVMDSETREAYSI----HTDGNEPI-QVVKFSPDGKLLALGSRDNYIYVYEVSGDS 691 (811)
Q Consensus 618 ~v~~~~~spdg-~~la~g~~dg~i~i~d~~~~~~~~~----~~~~~~~i-~~i~~spdg~~lasgs~dg~I~iwd~~~~~ 691 (811)
. ....|+| ..+++.+.||.+.+.+..+++.... +.....++ ..+.|++++..++.....+.|++.|+....
T Consensus 221 ~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~ 297 (426)
T 3c75_H 221 C---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEG 297 (426)
T ss_dssp E---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSC
T ss_pred c---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCc
Confidence 2 2334443 4555566777777777755554422 22222222 245789999888888888999999997643
Q ss_pred cceeEEEEecC--------CCCCeeEEEeCCCCCeEEEecC----------CceEEEEECCCCcccCCCCCccceeEecc
Q psy9770 692 RKYSRVGRCTG--------HSSFITHLDWSEDSMYIRSNSG----------DYELLYWNAGTCRQIPQSSQLRDVVWESN 753 (811)
Q Consensus 692 ~~~~~~~~~~~--------h~~~V~~l~~spdg~~L~s~s~----------Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~ 753 (811)
........+.. .......++|+||++.|+++.. ++.|.+.|+.+.+.+..+..
T Consensus 298 ~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v--------- 368 (426)
T 3c75_H 298 ATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL--------- 368 (426)
T ss_dssp EEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---------
T ss_pred eEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC---------
Confidence 11100000100 0111223689999887776532 46899999999987765431
Q ss_pred ceeeccceeeeCCCCCCCCccceEEecCCCC-EEEEEc-CCCcEEEEeCCCCCCCCcc
Q psy9770 754 SCTLTFTTIGIWPEGADGTDVNSCERSHDAR-VIATGD-DFGKLKLYSYPAVQPKLCL 809 (811)
Q Consensus 754 ~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~-~Las~~-~dg~v~vw~~~~~~~~~~~ 809 (811)
+.....|+|+|||+ +|+++. .++.|.|+|..+++.++++
T Consensus 369 -----------------g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 369 -----------------GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp -----------------EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred -----------------CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 22478899999999 888877 5899999999999887664
No 212
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.41 E-value=1.9e-11 Score=144.87 Aligned_cols=239 Identities=11% Similarity=0.008 Sum_probs=159.9
Q ss_pred CeEEEeeCCCCeEEEEeC-C-----CeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCe------------
Q psy9770 537 GIRTVSEGRGSQLIVGTT-R-----NCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRI------------ 598 (811)
Q Consensus 537 ~v~~l~~~~~~~l~~~~~-~-----~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~------------ 598 (811)
.+..++++|++..++.+. + ..|++||+.++.......+...+..++|+|| +.|+.++.++.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 577888999987554322 2 3699999998865433223333467899999 98988887654
Q ss_pred --EEEEeCCCCc----EEEEec-CCCCeEEEEEcCCCCEEEEEEeCC-----eEEEEecCCc--ceeEEecCCCCCeEEE
Q psy9770 599 --VQLWDSMSHS----VVWSKD-IAEQAQSATFSPDGSIIIVGCIAG-----RWLVMDSETR--EAYSIHTDGNEPIQVV 664 (811)
Q Consensus 599 --v~iwd~~~~~----~~~~~~-~~~~v~~~~~spdg~~la~g~~dg-----~i~i~d~~~~--~~~~~~~~~~~~i~~i 664 (811)
|++|++.++. .+.... ....+..+.|+|||++|+....++ .|++||+.++ +....+..+...+...
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 322 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF 322 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE
Confidence 8999998765 222221 123588999999999999888654 8999999876 4144444444445444
Q ss_pred EEccCCCEEEEEecC----CcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECC-CCccc
Q psy9770 665 KFSPDGKLLALGSRD----NYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAG-TCRQI 739 (811)
Q Consensus 665 ~~spdg~~lasgs~d----g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~-~~~~~ 739 (811)
++|+|+.|+..+.+ +.|++|++.++.. .....+..+...+..+.|+ ++.++++...|+..++|.+. +++.+
T Consensus 323 -~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~ 398 (741)
T 1yr2_A 323 -VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTP--RFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPA 398 (741)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEECSSSSC--EEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEE
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCcc--ccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCce
Confidence 35899998888764 4499999876421 1222234455567778887 66778888889887777654 33322
Q ss_pred CCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEE----EcCCCcEEEEeCCCCC
Q psy9770 740 PQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIAT----GDDFGKLKLYSYPAVQ 804 (811)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las----~~~dg~v~vw~~~~~~ 804 (811)
..+. ..+...|..++++||++.|+. ....++|++||+.+++
T Consensus 399 ~~l~------------------------~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 399 GAVS------------------------LPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EECB------------------------CSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eecc------------------------CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 2111 011346888999999886662 2345789999998765
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.40 E-value=2.6e-10 Score=118.85 Aligned_cols=229 Identities=8% Similarity=0.052 Sum_probs=155.2
Q ss_pred cceEEccCCcEEEEec---cEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCc
Q psy9770 264 SNLYLLPTGEIVYFVA---AVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLF 340 (811)
Q Consensus 264 ~~l~~spdg~~l~~~~---~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~ 340 (811)
....|+|++..|++.+ +.|..||..++....+ .....+.+++++++|+++++. . . .|.+||..+++
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~dG~l~v~~-~-~--------~l~~~d~~~g~ 84 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPVSSVALRQSGGYVATI-G-T--------KFCALNWKEQS 84 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCEEEEEEBTTSSEEEEE-T-T--------EEEEEETTTTE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-eCCCceEEEEECCCCCEEEEE-C-C--------eEEEEECCCCc
Confidence 4678888776666653 7999999998766444 356789999999999966653 3 3 69999999887
Q ss_pred EEEEeccC--CccccEEEEEEecCCCCcEEEEEeCCC-------CceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCC
Q psy9770 341 TVSIIGIG--EFERSISCLSFSKADGGTFLCAVDEGN-------DYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPL 411 (811)
Q Consensus 341 ~~~~l~~~--~h~~~V~~l~fs~~~dg~~Lasv~~s~-------d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~ 411 (811)
........ .....+..++++| +|+++++..+.. ...-.||.+.... .+..+..+......++|+|+
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~--dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g---~~~~~~~~~~~pngi~~spd 159 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDP--AGRYFAGTMAEETAPAVLERHQGALYSLFPDH---HVKKYFDQVDISNGLDWSLD 159 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECT--TSCEEEEEEECCSBTTBCCTTCEEEEEECTTS---CEEEEEEEESBEEEEEECTT
T ss_pred EEEEEecCCCCCCCCCCCEEECC--CCCEEEecCCcccccccccCCCcEEEEEECCC---CEEEEeeccccccceEEcCC
Confidence 65443311 1235688999999 888777531111 1234555554332 23334444456789999998
Q ss_pred CCCeEEEEC-CCcEEEEEEc-CCceeeeecccccccCCCCceEEEEEEcCCCcEE-EEcCCCcEEEEecCCceEEEEeec
Q psy9770 412 DRNNIVTCG-KSHINFWTID-AGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVL-SGDSNGNIIVWTRGSNTISKFIRN 488 (811)
Q Consensus 412 ~~~ll~~~~-d~~i~iwd~~-~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~ll-sg~~dg~I~vwd~~~~~~~~~~~~ 488 (811)
++.++++.. ++.|..|+++ ....+... ..+..+.........+++.++|.+. +...++.|.+||..+++.+..+.
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~~~~-~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~- 237 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQISNR-RSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK- 237 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCEEEE-EEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE-
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcccCc-EEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE-
Confidence 887877765 6889999984 22222211 1111112233567899999999965 44556789999999899888887
Q ss_pred ccccceEEEEEe-cCCcEEEEec
Q psy9770 489 VHEGSVFSICVL-KEGSIISAGG 510 (811)
Q Consensus 489 ~h~~~V~~l~~s-~dg~~l~s~s 510 (811)
.+...+++++|. |+++.|+.++
T Consensus 238 ~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 238 LPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp CSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCCceEEEEeCCCCCEEEEEc
Confidence 666789999998 7877665444
No 214
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.38 E-value=4.7e-10 Score=121.20 Aligned_cols=297 Identities=9% Similarity=0.066 Sum_probs=189.5
Q ss_pred CCcEEEEcCCCcEEEEecCCceEEEEeeccc--------ccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeee
Q psy9770 460 GGEVLSGDSNGNIIVWTRGSNTISKFIRNVH--------EGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQI 531 (811)
Q Consensus 460 ~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h--------~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~ 531 (811)
++.+++++.++.|..+|..+++.+....... ...+.+.....+ ..++.++.++.|..+|..+++......+
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG-GHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET-TEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC-CEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 5668888889999999999998887665211 223333322334 4555588899999999998877444444
Q ss_pred ccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccce------EEEEECCCCCeEEEEECCCeEEEEeCC
Q psy9770 532 AEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDEL------WALAAHPSLSQFLTAGFDRIVQLWDSM 605 (811)
Q Consensus 532 ~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v------~~l~~sp~~~~l~s~s~dg~v~iwd~~ 605 (811)
....... ....++.+++++.++.++.+|..++...-.......+ ...... +..++.+..++.|..+|..
T Consensus 132 ~~~~~~~---p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 132 AGEALSR---PVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp SSCCCSC---CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETT
T ss_pred CCceEcC---CEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC
Confidence 3221111 1123678999999999999999877543322222222 111222 4567778889999999999
Q ss_pred CCcEEEEecCCCCeE-----E---EEEcC--CCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEE
Q psy9770 606 SHSVVWSKDIAEQAQ-----S---ATFSP--DGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLAL 675 (811)
Q Consensus 606 ~~~~~~~~~~~~~v~-----~---~~~sp--dg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~las 675 (811)
+++.++......+.. . +...| .+..+++++.+|.+..+|..+++.+..... .....+.. ++..|++
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~ 282 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYL 282 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEE
Confidence 999998865432110 0 11111 356778888899999999999998766553 23444444 4667888
Q ss_pred EecCCcEEEEEecCCCcceeEEEEec-CCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccc
Q psy9770 676 GSRDNYIYVYEVSGDSRKYSRVGRCT-GHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNS 754 (811)
Q Consensus 676 gs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~ 754 (811)
++.++.|+.+|..+++..+. .. .....+..... .+..|+.++.+|.|.++|..+|+.+.....
T Consensus 283 ~~~~g~l~~~d~~tG~~~w~----~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~---------- 346 (376)
T 3q7m_A 283 VDQNDRVMALTIDGGVTLWT----QSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKV---------- 346 (376)
T ss_dssp EETTCCEEEEETTTCCEEEE----ECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC----------
T ss_pred EcCCCeEEEEECCCCcEEEe----ecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEec----------
Confidence 88899999999998854332 22 11222222233 356788888999999999999986542210
Q ss_pred eeeccceeeeCCCCCCCCccc-eEEecCCCCEEEEEcCCCcEEEEe
Q psy9770 755 CTLTFTTIGIWPEGADGTDVN-SCERSHDARVIATGDDFGKLKLYS 799 (811)
Q Consensus 755 ~~~~~~~~~i~~~~~h~~~I~-~l~~s~dg~~Las~~~dg~v~vw~ 799 (811)
....+. .... .+..|++++.+|.|+.|+
T Consensus 347 ---------------~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 347 ---------------DSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ---------------CTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred ---------------CCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 011121 1222 245777788899999987
No 215
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.38 E-value=1.7e-10 Score=124.76 Aligned_cols=296 Identities=11% Similarity=0.085 Sum_probs=191.6
Q ss_pred CCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCC---------CcEE-EEEecCCCCCeEEEECCCcEEEEEEcCCc
Q psy9770 364 GGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSV---------DTVV-AAEFHPLDRNNIVTCGKSHINFWTIDAGG 433 (811)
Q Consensus 364 dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~---------~~V~-~v~fsp~~~~ll~~~~d~~i~iwd~~~~~ 433 (811)
++.+++ +..++.|..+|.++++ .+....... ..+. .+.. +++.+++++.++.|..+|..+++
T Consensus 53 ~~~v~~---~~~~g~v~a~d~~tG~---~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~ 124 (376)
T 3q7m_A 53 DNVVYA---ADRAGLVKALNADDGK---EIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGT 124 (376)
T ss_dssp TTEEEE---ECTTSEEEEEETTTCC---EEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEE---EcCCCeEEEEEccCCc---eeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCC
Confidence 344444 3678899999999998 665555421 2222 2222 36788888889999999999888
Q ss_pred eeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccce------EEEEEecCCcEEE
Q psy9770 434 TLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSV------FSICVLKEGSIIS 507 (811)
Q Consensus 434 ~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V------~~l~~s~dg~~l~ 507 (811)
.+......-.. ...++ ..++.+++++.+|.|..+|..+++.+.... .. ..+ ...... ++ .++
T Consensus 125 ~~W~~~~~~~~---~~~p~-----~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~-~~-~~~~~~~~~~~~~~~-~~-~v~ 192 (376)
T 3q7m_A 125 VAWQTKVAGEA---LSRPV-----VSDGLVLIHTSNGQLQALNEADGAVKWTVN-LD-MPSLSLRGESAPTTA-FG-AAV 192 (376)
T ss_dssp EEEEEECSSCC---CSCCE-----EETTEEEEECTTSEEEEEETTTCCEEEEEE-CC-C-----CCCCCCEEE-TT-EEE
T ss_pred EEEEEeCCCce---EcCCE-----EECCEEEEEcCCCeEEEEECCCCcEEEEEe-CC-CCceeecCCCCcEEE-CC-EEE
Confidence 77654321110 11111 125678889999999999999998887765 22 111 122222 44 555
Q ss_pred EecCCCcEEEEeCCCCCccceeeeccccCC--------eEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceE
Q psy9770 508 AGGKDGRLLQFDSNLQPTGYEAQIAEHLGG--------IRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELW 579 (811)
Q Consensus 508 s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~--------v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~ 579 (811)
.+..++.|..+|..+++...........+. +.......++.+++++.++.++.+|..++...-... .....
T Consensus 193 ~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~-~~~~~ 271 (376)
T 3q7m_A 193 VGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE-LGSVN 271 (376)
T ss_dssp ECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC-CCCEE
T ss_pred EEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc-CCCCC
Confidence 588899999999988776444433221110 111111235788889999999999998774432221 22344
Q ss_pred EEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEec-CCC-CeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCC
Q psy9770 580 ALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKD-IAE-QAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDG 657 (811)
Q Consensus 580 ~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~-~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~ 657 (811)
.+.. ++..++.++.++.|..+|..+++.++... ... ......+ .+..|++++.+|.++++|..+++.+......
T Consensus 272 ~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~ 347 (376)
T 3q7m_A 272 DFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVD 347 (376)
T ss_dssp EEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECC
T ss_pred CceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecC
Confidence 4444 36678888899999999999999988865 222 2222222 3568888999999999999999988777653
Q ss_pred CCCeEE-EEEccCCCEEEEEecCCcEEEEE
Q psy9770 658 NEPIQV-VKFSPDGKLLALGSRDNYIYVYE 686 (811)
Q Consensus 658 ~~~i~~-i~~spdg~~lasgs~dg~I~iwd 686 (811)
...+.. ... .+..|++++.+|.|+.|+
T Consensus 348 ~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 348 SSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 333322 222 245677888999999986
No 216
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.37 E-value=4.4e-11 Score=126.55 Aligned_cols=303 Identities=12% Similarity=0.073 Sum_probs=195.9
Q ss_pred EEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeecc
Q psy9770 454 CLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAE 533 (811)
Q Consensus 454 ~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~ 533 (811)
+.....+|.+.+++.++.|..|| .+++...... .+...+.++...++|.+++ ++.+ |..+|.. +..........
T Consensus 24 ~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~-~~~~~~~~~~~~~~g~l~v-~t~~--l~~~d~~-g~~~~~~~~~~ 97 (330)
T 3hxj_A 24 SPILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFK-SGEIIECRPSIGKDGTIYF-GSDK--VYAINPD-GTEKWRFDTKK 97 (330)
T ss_dssp CCEECTTSCEECSSTTTTTEEEC-TTSCEEESSC-GGGEEEECCEETTTTEECC-SSCE--EEEECCC-GGGGGGSCC--
T ss_pred CceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEe-cCCCcccceEEecCCcEEE-ecCc--EEEECCC-CcEEEEEECCC
Confidence 44556778888888899999999 7888766554 4445567777777777655 5554 8888863 33312222222
Q ss_pred ccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEe
Q psy9770 534 HLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK 613 (811)
Q Consensus 534 ~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 613 (811)
.. ....... ++.+++++.++.++.+|...........+...+.++...+++. +..++.++.|..+|.. ++..+..
T Consensus 98 ~~--~~~~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~ 172 (330)
T 3hxj_A 98 AI--VSDFTIF-EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRF 172 (330)
T ss_dssp -----CCEEEE-TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEE
T ss_pred Cc--ccCceEE-CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEE
Confidence 11 1122222 7889999999999999988333333333444456667776666 5567778999999998 8777765
Q ss_pred cC-CCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCc
Q psy9770 614 DI-AEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR 692 (811)
Q Consensus 614 ~~-~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~ 692 (811)
.. ...+.++.+.++|.+++ ++ +.|..|| .+++.+..+......+.++.+.++|.+ ..++.++.|..++. ++.
T Consensus 173 ~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~-~g~- 245 (330)
T 3hxj_A 173 KTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAINP-DGT- 245 (330)
T ss_dssp ECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEECT-TSC-
T ss_pred ecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEECC-CCC-
Confidence 44 34566777778887554 44 8899999 777777766666667888889888864 44567788888863 332
Q ss_pred ceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCC
Q psy9770 693 KYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGT 772 (811)
Q Consensus 693 ~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~ 772 (811)
.+..+......+..+.+.+++ .|..++.+|.|..+|. +++.+.... ....
T Consensus 246 ---~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~-------------------------~~~~ 295 (330)
T 3hxj_A 246 ---EKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFE-------------------------TGSW 295 (330)
T ss_dssp ---EEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEE-------------------------CSSC
T ss_pred ---EeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEE-------------------------cCCc
Confidence 222333334444556666566 4556777888999986 555432211 0134
Q ss_pred ccceEEecCCCCEEEEEcCCCcEEEEeCCCCCC
Q psy9770 773 DVNSCERSHDARVIATGDDFGKLKLYSYPAVQP 805 (811)
Q Consensus 773 ~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~ 805 (811)
.+.++...++|++.+ ++.+|.+++...+..++
T Consensus 296 ~~~~~~~d~~g~l~~-gt~~G~~~~~~~~~~~~ 327 (330)
T 3hxj_A 296 IIATPVIDENGTIYF-GTRNGKFYALFNLEHHH 327 (330)
T ss_dssp CCSCCEECTTCCEEE-ECTTSCEEEEEC-----
T ss_pred cccceEEcCCCEEEE-EcCCCeEEEEecccccc
Confidence 577888878887555 78889999988765543
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.35 E-value=7.3e-10 Score=115.41 Aligned_cols=222 Identities=9% Similarity=0.072 Sum_probs=159.3
Q ss_pred eEEEEEEcCCCc-E-EEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccce
Q psy9770 451 YVTCLAFTQGGE-V-LSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYE 528 (811)
Q Consensus 451 ~v~~l~~s~~g~-l-lsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~ 528 (811)
...+..|++++. + ++...++.|+.||..+++.. .+ .....+.+++++++|+++++ . ++.|.+||.+++.....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~--~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV--TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE--ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE--eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEE
Confidence 356888998644 4 47778899999999887653 33 24578999999999997664 3 56899999987665222
Q ss_pred eeecc--ccCCeEEEeeCCCCeEEEEeC------------CCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEE-E
Q psy9770 529 AQIAE--HLGGIRTVSEGRGSQLIVGTT------------RNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLT-A 593 (811)
Q Consensus 529 ~~~~~--~~~~v~~l~~~~~~~l~~~~~------------~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s-~ 593 (811)
..... ....+..+++.+++.+++++. .+.|+.++... ....+..+......++|+|+++.|+. .
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBEEEEEECTTSCEEEEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccccceEEcCCCCEEEEec
Confidence 22211 123467788999999888763 23566665543 33334444556789999999986654 4
Q ss_pred ECCCeEEEEeC--CCCcEEE-----Ee-cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEE
Q psy9770 594 GFDRIVQLWDS--MSHSVVW-----SK-DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVK 665 (811)
Q Consensus 594 s~dg~v~iwd~--~~~~~~~-----~~-~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~ 665 (811)
+.++.|.+|++ .++.... .+ .....+..++++++|.+.++....+.|.+||..+++.+..+..+...+++++
T Consensus 168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~ 247 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCC 247 (297)
T ss_dssp GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEE
T ss_pred CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEE
Confidence 55789999987 4554321 11 1235678999999998877777788999999999999988887777899999
Q ss_pred Ec-cCCCEEEEEec
Q psy9770 666 FS-PDGKLLALGSR 678 (811)
Q Consensus 666 ~s-pdg~~lasgs~ 678 (811)
|. ||++.|++++.
T Consensus 248 f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 248 FGGKNYSEMYVTCA 261 (297)
T ss_dssp EESGGGCEEEEEEB
T ss_pred EeCCCCCEEEEEcC
Confidence 98 88887776654
No 218
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.35 E-value=1.1e-10 Score=135.61 Aligned_cols=276 Identities=13% Similarity=0.120 Sum_probs=185.6
Q ss_pred CCcEEEEcCCCcEEEEecCCceEEEEeeccccc----------ceEEEEEecCCcEEEEecCCCcEEEEeCCCCCcccee
Q psy9770 460 GGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEG----------SVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEA 529 (811)
Q Consensus 460 ~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~----------~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~ 529 (811)
++.+++++.++.|+.+|..+|+.+..+...... ....+++ ++..|+.++.|+.|..+|..+++.....
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 567778888999999999999998877621110 0112333 3456666889999999999988875544
Q ss_pred eec-ccc--CCeEEEeeCCCCeEEEEeC------CCeEEEEEccCCceee-eee--------------------------
Q psy9770 530 QIA-EHL--GGIRTVSEGRGSQLIVGTT------RNCILVGSLNLGFSPV-VLG-------------------------- 573 (811)
Q Consensus 530 ~~~-~~~--~~v~~l~~~~~~~l~~~~~------~~~i~~~d~~~~~~~~-~~~-------------------------- 573 (811)
... ... ..+.......++.+++++. ++.|+.+|..++...- +..
T Consensus 155 ~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~ 234 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred cCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence 443 110 1111111112567777664 5889999988764321 111
Q ss_pred ------cccceEEEEECCCCCeEEEEECCC-------------------eEEEEeCCCCcEEEEecCC----------CC
Q psy9770 574 ------HTDELWALAAHPSLSQFLTAGFDR-------------------IVQLWDSMSHSVVWSKDIA----------EQ 618 (811)
Q Consensus 574 ------h~~~v~~l~~sp~~~~l~s~s~dg-------------------~v~iwd~~~~~~~~~~~~~----------~~ 618 (811)
.......++++|++.+++.+..++ .|..+|..+++.++.+... ..
T Consensus 235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 314 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQP 314 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCC
Confidence 011113578889888888887664 5999999999999986532 12
Q ss_pred eEEEEEcCCC---CEEEEEEeCCeEEEEecCCcceeEEecCCCC-----------Ce-----------------------
Q psy9770 619 AQSATFSPDG---SIIIVGCIAGRWLVMDSETREAYSIHTDGNE-----------PI----------------------- 661 (811)
Q Consensus 619 v~~~~~spdg---~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~-----------~i----------------------- 661 (811)
..-+....+| ..|++++.+|.++++|..+|+++..+..... ++
T Consensus 315 p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~ 394 (677)
T 1kb0_A 315 MILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHN 394 (677)
T ss_dssp CEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSC
T ss_pred cEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccC
Confidence 3334444578 6889999999999999999998766542210 01
Q ss_pred -EEEEEccCCCEEEEEecC-------------------------------------------CcEEEEEecCCCcceeEE
Q psy9770 662 -QVVKFSPDGKLLALGSRD-------------------------------------------NYIYVYEVSGDSRKYSRV 697 (811)
Q Consensus 662 -~~i~~spdg~~lasgs~d-------------------------------------------g~I~iwd~~~~~~~~~~~ 697 (811)
..++|+|++.++++...+ |.|..||+.+++..++.
T Consensus 395 w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~- 473 (677)
T 1kb0_A 395 WHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV- 473 (677)
T ss_dssp SSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE-
T ss_pred CCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeec-
Confidence 257899998888876432 67999999988544433
Q ss_pred EEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCC
Q psy9770 698 GRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQS 742 (811)
Q Consensus 698 ~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~ 742 (811)
. +...+....+..++..++.++.||.+++||..+|+.+..+
T Consensus 474 ---~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 474 ---E-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp ---E-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ---C-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence 2 2233444456667888999999999999999999987644
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.34 E-value=2.4e-10 Score=124.68 Aligned_cols=248 Identities=8% Similarity=-0.034 Sum_probs=167.2
Q ss_pred CCeEEEeeCCCCeEEEEeC-CCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCC--eEEEEeCCCCcEEEE
Q psy9770 536 GGIRTVSEGRGSQLIVGTT-RNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDR--IVQLWDSMSHSVVWS 612 (811)
Q Consensus 536 ~~v~~l~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg--~v~iwd~~~~~~~~~ 612 (811)
.....+++++++.++++.. ++.|++||..++....+........ ++|+|+++.|+.+..++ .|.+|+...+.....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 3567888999888887765 4799999998776555544434444 99999999998888766 799999876654333
Q ss_pred e----c-CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEE----ecCCCCC--eEEEEEccC-CCEEEEEecCC
Q psy9770 613 K----D-IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI----HTDGNEP--IQVVKFSPD-GKLLALGSRDN 680 (811)
Q Consensus 613 ~----~-~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~----~~~~~~~--i~~i~~spd-g~~lasgs~dg 680 (811)
. . ....+.+++++|++..|+++..++.|+.||..++..... ..++... ...++|+|+ +.++++-..++
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 3 2 446688999999655666677788999999987764332 2222222 239999995 55555555678
Q ss_pred cEEEEEecCCCcceeEEEEecCC---------------CCCeeEEEeCCCCCeEEEec-CCceEEEEECCCCcccCCCCC
Q psy9770 681 YIYVYEVSGDSRKYSRVGRCTGH---------------SSFITHLDWSEDSMYIRSNS-GDYELLYWNAGTCRQIPQSSQ 744 (811)
Q Consensus 681 ~I~iwd~~~~~~~~~~~~~~~~h---------------~~~V~~l~~spdg~~L~s~s-~Dg~i~iWd~~~~~~~~~~~~ 744 (811)
.|+.|+.... .. .+.++ -.....++|+++|+++++-. .++.|+.|++.+++.......
T Consensus 290 ~I~~~~~~g~---~~---~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 290 SVYKITPDGE---CE---WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp EEEEECTTCC---EE---EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEecCCC---EE---EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCC
Confidence 8999886542 11 22222 23578999999999888887 889999999877763321110
Q ss_pred ccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCC
Q psy9770 745 LRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSYP 801 (811)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~ 801 (811)
.. ..++. .+ -.....-.....|+++++|.++++-..++.|+.++++
T Consensus 364 ~~---------~~g~~-~g-~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 364 VD---------VASQI-DG-TPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TT---------CBSCC-CB-STTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CC---------CCCcC-CC-ChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 00 00000 00 0001112457899999999888888888899988763
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.33 E-value=5.4e-10 Score=121.82 Aligned_cols=233 Identities=13% Similarity=0.027 Sum_probs=164.9
Q ss_pred ceEEEEEEcCCCcEE-EEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCC--cEEEEeCCCCCcc
Q psy9770 450 KYVTCLAFTQGGEVL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDG--RLLQFDSNLQPTG 526 (811)
Q Consensus 450 ~~v~~l~~s~~g~ll-sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg--~I~~wd~~~~~~~ 526 (811)
.....++|++++.++ +...++.|++||..++....... .. .... ++|+++++.|+.+..++ .|.+|+.......
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~-~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP-GF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE-TC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec-cC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 347899999999965 55667899999999887776655 32 2233 99999999888887766 7888887654331
Q ss_pred cee-ee-ccccCCeEEEeeCC-CCeEEEEeCCCeEEEEEccCCceeeee-----ecccce--EEEEECCC-CCeEEEEEC
Q psy9770 527 YEA-QI-AEHLGGIRTVSEGR-GSQLIVGTTRNCILVGSLNLGFSPVVL-----GHTDEL--WALAAHPS-LSQFLTAGF 595 (811)
Q Consensus 527 ~~~-~~-~~~~~~v~~l~~~~-~~~l~~~~~~~~i~~~d~~~~~~~~~~-----~h~~~v--~~l~~sp~-~~~l~s~s~ 595 (811)
... .+ ......+..+++++ ++.++++..++.|+.|+........+. ++...- ..++|+|+ +.++++-..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 111 11 21445677888888 789998877889999999877544431 122222 39999995 556666667
Q ss_pred CCeEEEEeCCCCcEEEEecC---------------CCCeEEEEEcCCCCEEEEEE-eCCeEEEEecCCcceeEEecCC--
Q psy9770 596 DRIVQLWDSMSHSVVWSKDI---------------AEQAQSATFSPDGSIIIVGC-IAGRWLVMDSETREAYSIHTDG-- 657 (811)
Q Consensus 596 dg~v~iwd~~~~~~~~~~~~---------------~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~~~~~~~~~~~~-- 657 (811)
++.|+.|+.... ....... -.....++++|+|.++++-. .++.|+.||+.++...... ++
T Consensus 288 ~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~-g~~~ 365 (409)
T 3hrp_A 288 LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA-GQVD 365 (409)
T ss_dssp TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEE-ECTT
T ss_pred CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe-CCCC
Confidence 889999997654 2222221 13478999999999777766 7889999998777644332 22
Q ss_pred -------------CCCeEEEEEccCCCEEEEEecCCcEEEEEe
Q psy9770 658 -------------NEPIQVVKFSPDGKLLALGSRDNYIYVYEV 687 (811)
Q Consensus 658 -------------~~~i~~i~~spdg~~lasgs~dg~I~iwd~ 687 (811)
-.....++++++|.++++-..++.|+.+++
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 235788999999888887777888888875
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.32 E-value=1.7e-09 Score=114.23 Aligned_cols=220 Identities=10% Similarity=-0.020 Sum_probs=155.1
Q ss_pred EEEEEEcCCCc-E-EEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCcccee
Q psy9770 452 VTCLAFTQGGE-V-LSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEA 529 (811)
Q Consensus 452 v~~l~~s~~g~-l-lsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~ 529 (811)
..+.+|+|++. + ++...++.|.+||..+++... +. ....+.++++.++|+++++. .+ .|.+||..++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~--~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA--LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE--CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE--CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe
Confidence 46788999754 4 477788999999998876543 32 35679999999999988854 44 4999998776652221
Q ss_pred eecc--ccCCeEEEeeCCCCeEEEEeC-------CCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEE-ECCCeE
Q psy9770 530 QIAE--HLGGIRTVSEGRGSQLIVGTT-------RNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTA-GFDRIV 599 (811)
Q Consensus 530 ~~~~--~~~~v~~l~~~~~~~l~~~~~-------~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~-s~dg~v 599 (811)
.... ....+..+++++++.+++++. .+.|+.++ .+....+..+......++|+|+++.++.+ +.++.|
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 1111 123577888999999888764 25677777 34333333444567799999999876555 456899
Q ss_pred EEEeCC--CC-cE-----EEEec-CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEc-cC
Q psy9770 600 QLWDSM--SH-SV-----VWSKD-IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFS-PD 669 (811)
Q Consensus 600 ~iwd~~--~~-~~-----~~~~~-~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~s-pd 669 (811)
.+||+. ++ .. ...+. ....+..++++++|.+.++...++.|.+||. +++.+..+..+...+++++|+ +|
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTT
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCC
Confidence 999985 55 31 21221 2345788999999987777666789999998 577777777676779999998 88
Q ss_pred CCEEEEEecC
Q psy9770 670 GKLLALGSRD 679 (811)
Q Consensus 670 g~~lasgs~d 679 (811)
++.|++++..
T Consensus 283 ~~~L~vt~~~ 292 (326)
T 2ghs_A 283 ASRLLVTSAR 292 (326)
T ss_dssp SCEEEEEEBC
T ss_pred CCEEEEEecC
Confidence 8877665543
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.31 E-value=1.1e-09 Score=115.63 Aligned_cols=218 Identities=11% Similarity=-0.010 Sum_probs=151.0
Q ss_pred eEEEEEecC-CcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeee
Q psy9770 494 VFSICVLKE-GSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL 572 (811)
Q Consensus 494 V~~l~~s~d-g~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~ 572 (811)
..+.+|+++ +.++++...++.|..||...+.. .... ....+.++++.+++.+++++. +.|++||..++....+.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~---~~~~v~~i~~~~dg~l~v~~~-~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHA---LPFMGSALAKISDSKQLIASD-DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEE---CSSCEEEEEEEETTEEEEEET-TEEEEEETTTCCEEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEE---CCCcceEEEEeCCCeEEEEEC-CCEEEEECCCCcEEEEe
Confidence 456789986 55666677788999999987654 2222 235688899999999988875 45999998776544433
Q ss_pred ec-----ccceEEEEECCCCCeEEEEEC------CCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE-eCCeE
Q psy9770 573 GH-----TDELWALAAHPSLSQFLTAGF------DRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGC-IAGRW 640 (811)
Q Consensus 573 ~h-----~~~v~~l~~sp~~~~l~s~s~------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~-~dg~i 640 (811)
.. ...+.+++++|+|+++++... .+.|..++ +++.............++|+|||+.|+++. .++.|
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 22 236889999999997765542 24566666 455433333334577899999999876654 46899
Q ss_pred EEEecC--Cc-c-----eeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEe
Q psy9770 641 LVMDSE--TR-E-----AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDW 712 (811)
Q Consensus 641 ~i~d~~--~~-~-----~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~ 712 (811)
.+||+. ++ . .+..+.........+++.++|.++++...++.|.+|+.. + +.+..+..+...+++++|
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g----~~~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-G----NHIARYEVPGKQTTCPAF 278 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-C----CEEEEEECSCSBEEEEEE
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-C----CEEEEEECCCCCcEEEEE
Confidence 999986 55 3 222333334557789999999887776667889999873 3 234455556667999999
Q ss_pred C-CCCCeEEEec
Q psy9770 713 S-EDSMYIRSNS 723 (811)
Q Consensus 713 s-pdg~~L~s~s 723 (811)
+ ++++.|+.++
T Consensus 279 ~g~d~~~L~vt~ 290 (326)
T 2ghs_A 279 IGPDASRLLVTS 290 (326)
T ss_dssp ESTTSCEEEEEE
T ss_pred ecCCCCEEEEEe
Confidence 8 8887665443
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.31 E-value=3.9e-10 Score=118.02 Aligned_cols=231 Identities=10% Similarity=0.012 Sum_probs=154.6
Q ss_pred ccCCeEEEeeCCCCe--EEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEE
Q psy9770 534 HLGGIRTVSEGRGSQ--LIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVW 611 (811)
Q Consensus 534 ~~~~v~~l~~~~~~~--l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~ 611 (811)
.........+.+++. +++....+.|+.|+.. +....+..+...+.+++++++|+++++...++.|.+|+.. ++...
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHL 120 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEE
Confidence 333455666777655 5556677899999984 4445566667789999999999977666566899999986 55432
Q ss_pred EecC-----CCCeEEEEEcCCCCEEEE----EEe-------------CCeEEEEecCCcceeEEecCCCCCeEEEEEccC
Q psy9770 612 SKDI-----AEQAQSATFSPDGSIIIV----GCI-------------AGRWLVMDSETREAYSIHTDGNEPIQVVKFSPD 669 (811)
Q Consensus 612 ~~~~-----~~~v~~~~~spdg~~la~----g~~-------------dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spd 669 (811)
.... ...+..++++|+|+++++ |.. .+.|..||..+++..... .......++|+||
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spd 198 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPD 198 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTT
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCC
Confidence 2211 134678999999998875 332 256888888777654433 3345678999999
Q ss_pred CCEEEEEecC------CcEEEEEecCCCcceeEEEEe-cCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCC
Q psy9770 670 GKLLALGSRD------NYIYVYEVSGDSRKYSRVGRC-TGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQS 742 (811)
Q Consensus 670 g~~lasgs~d------g~I~iwd~~~~~~~~~~~~~~-~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~ 742 (811)
|+.|+.+... +.|++|++..+. ......+ .........+++.++|++.++. .+ .|.+|+.. ++.+..+
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~--l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~-g~~~~~~ 273 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGA--LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSD-GQLLGHI 273 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTE--EEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECTT-SCEEEEE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCC--ccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECCC-CCEEEEE
Confidence 9988887665 689999998653 1111111 2234456678999999965544 45 49999984 5544322
Q ss_pred CCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcEEEEeC
Q psy9770 743 SQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKLKLYSY 800 (811)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~ 800 (811)
.. ...+.+++|+++++.|..++.++ +..+++
T Consensus 274 ~~--------------------------~~~~~~~~f~~d~~~L~it~~~~-l~~~~~ 304 (305)
T 3dr2_A 274 PT--------------------------PGTASNCTFDQAQQRLFITGGPC-LWMLPL 304 (305)
T ss_dssp EC--------------------------SSCCCEEEECTTSCEEEEEETTE-EEEEEC
T ss_pred EC--------------------------CCceeEEEEeCCCCEEEEEcCCe-EEEEEC
Confidence 10 12488999999998888777765 444443
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.30 E-value=4.1e-10 Score=131.14 Aligned_cols=274 Identities=14% Similarity=0.157 Sum_probs=180.9
Q ss_pred CCcEEEEcCCCcEEEEecCCceEEEEeeccccc----------ce-EEEEEecCCcEEEEecCCCcEEEEeCCCCCccce
Q psy9770 460 GGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEG----------SV-FSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYE 528 (811)
Q Consensus 460 ~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~----------~V-~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~ 528 (811)
++.+++++.++.|+.+|..+|+.+..+. .+.. .+ ..+.+ .+..|+.++.|+.|+.+|..+++....
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYD-PQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEEC-CCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEc-CCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee
Confidence 5677888889999999999999888775 2211 01 11222 244666688999999999998887554
Q ss_pred eeeccccCCeEEEeeCC---CCeEEEEeC------CCeEEEEEccCCceee-ee--------------------------
Q psy9770 529 AQIAEHLGGIRTVSEGR---GSQLIVGTT------RNCILVGSLNLGFSPV-VL-------------------------- 572 (811)
Q Consensus 529 ~~~~~~~~~v~~l~~~~---~~~l~~~~~------~~~i~~~d~~~~~~~~-~~-------------------------- 572 (811)
.....+......+..+| ++.++++.. ++.|+.+|..++...- +.
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred ecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 44430111111111122 567777653 5789999988774321 11
Q ss_pred -----ecccceEEEEECCCCCeEEEEECCCe-------------------EEEEeCCCCcEEEEecCC----------CC
Q psy9770 573 -----GHTDELWALAAHPSLSQFLTAGFDRI-------------------VQLWDSMSHSVVWSKDIA----------EQ 618 (811)
Q Consensus 573 -----~h~~~v~~l~~sp~~~~l~s~s~dg~-------------------v~iwd~~~~~~~~~~~~~----------~~ 618 (811)
++......++++|+..+++.+..++. |..||..+++.++.+... .+
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 306 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQH 306 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCC
Confidence 00011125788888889998887764 999999999999986431 12
Q ss_pred eEEEEEcCCCC---EEEEEEeCCeEEEEecCCcceeEEecCCC-------------------------------------
Q psy9770 619 AQSATFSPDGS---IIIVGCIAGRWLVMDSETREAYSIHTDGN------------------------------------- 658 (811)
Q Consensus 619 v~~~~~spdg~---~la~g~~dg~i~i~d~~~~~~~~~~~~~~------------------------------------- 658 (811)
+....+..+|+ .+++++.+|.++++|..+|+++.......
T Consensus 307 ~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~ 386 (689)
T 1yiq_A 307 MILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFW 386 (689)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTT
T ss_pred cEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcc
Confidence 22223334665 78889999999999999999874332110
Q ss_pred --CCeEEEEEccCCCEEEEEec---------------------------------------------CCcEEEEEecCCC
Q psy9770 659 --EPIQVVKFSPDGKLLALGSR---------------------------------------------DNYIYVYEVSGDS 691 (811)
Q Consensus 659 --~~i~~i~~spdg~~lasgs~---------------------------------------------dg~I~iwd~~~~~ 691 (811)
..-..++|+|+..+|++... +|.|+.||+.+++
T Consensus 387 Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~ 466 (689)
T 1yiq_A 387 GAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ 466 (689)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE
T ss_pred cccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCC
Confidence 01123789998888877632 3779999999985
Q ss_pred cceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCC
Q psy9770 692 RKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQ 741 (811)
Q Consensus 692 ~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~ 741 (811)
..++. ..+ ..+..-.++..+.+++.++.||.|+.||.++|+.+-.
T Consensus 467 ~~W~~----~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 467 AAWEV----PYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp EEEEE----EES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred eEeEc----cCC-CCccCccceECCCEEEEECCCCcEEEEECCCCcccee
Confidence 44433 222 2223334556788999999999999999999998754
No 225
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.30 E-value=1.9e-11 Score=130.21 Aligned_cols=179 Identities=15% Similarity=0.103 Sum_probs=135.3
Q ss_pred ceEEEEECCCCCeEEEEECCCeEEEEeCCCCc-----------EEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEec
Q psy9770 577 ELWALAAHPSLSQFLTAGFDRIVQLWDSMSHS-----------VVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDS 645 (811)
Q Consensus 577 ~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~-----------~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~ 645 (811)
.+..+++++...++++|+.+ .+.+|++...+ ......+.. |+.++| |+.+|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 68899999999999999988 56669865332 223345667 999999 99999999 8899999999
Q ss_pred CCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCC
Q psy9770 646 ETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGD 725 (811)
Q Consensus 646 ~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~D 725 (811)
.+.........+...+.++.+.+.. +|++..||.|.+||+.++.. .. +...|++++|||+| ++.|..|
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~--~~------~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKST--KQ------LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCE--EE------EEESEEEEEECSSE--EEEEETT
T ss_pred hhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcc--cc------ccCCceEEEEcCCc--eEEEEcC
Confidence 8877666666777788888877653 88889999999999997632 11 34579999999999 6788899
Q ss_pred ceEEEEECCCCcc--cCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEE
Q psy9770 726 YELLYWNAGTCRQ--IPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIAT 788 (811)
Q Consensus 726 g~i~iWd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las 788 (811)
|.+++|+...++. ...+..... +-....|...|.+|+|.+++.+|++
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~----------------~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSE----------------LEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHH----------------HHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcc----------------cccccCCCeeEEEEEEecCCeEEEE
Confidence 9999999887663 222211000 0001135678999999999998886
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.30 E-value=7.3e-10 Score=128.78 Aligned_cols=335 Identities=11% Similarity=0.096 Sum_probs=199.8
Q ss_pred cEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccc---------cEEEEEEecCCCCcEEEEEeCCCCceEEEE
Q psy9770 312 LLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFER---------SISCLSFSKADGGTFLCAVDEGNDYNISVW 382 (811)
Q Consensus 312 ~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~---------~V~~l~fs~~~dg~~Lasv~~s~d~~i~vW 382 (811)
..|.+++.++ .|.-+|..+|+.+-.+....... ....+++. ++..++ ++.|+.|..+
T Consensus 78 g~vyv~~~~~--------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~---~~~v~v---~~~dg~l~al 143 (677)
T 1kb0_A 78 GIMYVSASWS--------VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW---KGKVYV---GAWDGRLIAL 143 (677)
T ss_dssp TEEEEECGGG--------CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE---TTEEEE---ECTTSEEEEE
T ss_pred CEEEEECCCC--------eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE---CCEEEE---EcCCCEEEEE
Confidence 3455555566 89999999999988776332110 01223332 344444 4789999999
Q ss_pred EcccCCCcceEEEeeeC-C----CcEEE-EEecCCCCCeEEEEC------CCcEEEEEEcCCceeeeeccccccc-----
Q psy9770 383 DWQKSDRGHKITETKCS-V----DTVVA-AEFHPLDRNNIVTCG------KSHINFWTIDAGGTLYKKQGIFEMI----- 445 (811)
Q Consensus 383 d~~~~~~~~~~~~~~~~-~----~~V~~-v~fsp~~~~ll~~~~------d~~i~iwd~~~~~~~~~~~~~~~~l----- 445 (811)
|.++++ .+..+..+ . ..+.. ... .++.+++++. ++.|+.||..+|+.+.+....-...
T Consensus 144 D~~tG~---~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~ 218 (677)
T 1kb0_A 144 DAATGK---EVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFE 218 (677)
T ss_dssp ETTTCC---EEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCS
T ss_pred ECCCCC---EEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccc
Confidence 999999 77777654 1 11111 111 1455665553 6889999999998887654311110
Q ss_pred -----------C---------CCCceEEEEEEcCCCc-EEEEcCCC-------------------cEEEEecCCceEEEE
Q psy9770 446 -----------R---------DKPKYVTCLAFTQGGE-VLSGDSNG-------------------NIIVWTRGSNTISKF 485 (811)
Q Consensus 446 -----------~---------~~~~~v~~l~~s~~g~-llsg~~dg-------------------~I~vwd~~~~~~~~~ 485 (811)
. +.......+++.+++. ++.+..++ .|..+|..+|+.+..
T Consensus 219 ~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~ 298 (677)
T 1kb0_A 219 DESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWH 298 (677)
T ss_dssp SHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEE
T ss_pred ccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEE
Confidence 0 0111123577888766 44665553 499999999999887
Q ss_pred eecccc--------cceEEEEEecCC---cEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeC
Q psy9770 486 IRNVHE--------GSVFSICVLKEG---SIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTT 554 (811)
Q Consensus 486 ~~~~h~--------~~V~~l~~s~dg---~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~ 554 (811)
++..+. .....+....+| ..++.++.+|.|+++|..+++......+... .....+. ..+..+....
T Consensus 299 ~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~-~~~~~~d--~~g~~~~~~~ 375 (677)
T 1kb0_A 299 YQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPV-NWASGYD--KHGKPIGIAA 375 (677)
T ss_dssp EESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCC-SSEEEEC--TTSCEEECGG
T ss_pred EecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccccccc-CcccccC--CCCceeeccc
Confidence 763221 122233344477 6888899999999999998887333222110 0011110 1111100000
Q ss_pred CCeEEEEEccCCceeeee---ecccceEEEEECCCCCeEEEEEC------------------------------------
Q psy9770 555 RNCILVGSLNLGFSPVVL---GHTDELWALAAHPSLSQFLTAGF------------------------------------ 595 (811)
Q Consensus 555 ~~~i~~~d~~~~~~~~~~---~h~~~v~~l~~sp~~~~l~s~s~------------------------------------ 595 (811)
. .........+. +... -..++++|+..++++...
T Consensus 376 ~------~~~~~~~~~~P~~~G~~~-w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 448 (677)
T 1kb0_A 376 A------RDGSKPQDAVPGPYGAHN-WHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNA 448 (677)
T ss_dssp G------GCTTSCEECSSCTTCSSC-SSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECS
T ss_pred c------CcCCCccEECcCcccccC-CCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccccc
Confidence 0 00000000000 0000 024556666555555432
Q ss_pred -------CCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCC-CCeEEEEEc
Q psy9770 596 -------DRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGN-EPIQVVKFS 667 (811)
Q Consensus 596 -------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~i~~s 667 (811)
.+.|..||+.+++.++...+..++....+..++..+++++.+|.+++||..+++.+..+.... ..-.-+.|.
T Consensus 449 ~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~ 528 (677)
T 1kb0_A 449 EPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYM 528 (677)
T ss_dssp SCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred ccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEE
Confidence 278999999999999998777666666777888899999999999999999999998887433 333456777
Q ss_pred cCCCEEEE
Q psy9770 668 PDGKLLAL 675 (811)
Q Consensus 668 pdg~~las 675 (811)
.+|+.+++
T Consensus 529 ~~G~~~v~ 536 (677)
T 1kb0_A 529 VDGRQYVS 536 (677)
T ss_dssp ETTEEEEE
T ss_pred eCCEEEEE
Confidence 88875443
No 227
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.29 E-value=3.7e-11 Score=127.19 Aligned_cols=294 Identities=11% Similarity=0.093 Sum_probs=190.2
Q ss_pred CCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeeccccc
Q psy9770 364 GGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFE 443 (811)
Q Consensus 364 dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~ 443 (811)
+|.+.+ +..++.|..|| .+++ .+.....+...+.++.+.+ ++.+++++.+ |..+|. +++.+.....
T Consensus 30 ~g~l~v---~t~~~~l~~~d-~~g~---~~~~~~~~~~~~~~~~~~~-~g~l~v~t~~--l~~~d~-~g~~~~~~~~--- 95 (330)
T 3hxj_A 30 NGTIYL---GSSNKNLYAIN-TDGS---VKWFFKSGEIIECRPSIGK-DGTIYFGSDK--VYAINP-DGTEKWRFDT--- 95 (330)
T ss_dssp TSCEEC---SSTTTTTEEEC-TTSC---EEESSCGGGEEEECCEETT-TTEECCSSCE--EEEECC-CGGGGGGSCC---
T ss_pred CCeEEE---EcCCCEEEEEC-CCCc---EEEEEecCCCcccceEEec-CCcEEEecCc--EEEECC-CCcEEEEEEC---
Confidence 566554 46788899999 7777 5555444444556666665 3444444434 777765 3444332211
Q ss_pred ccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCC
Q psy9770 444 MIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQ 523 (811)
Q Consensus 444 ~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~ 523 (811)
.........+. ++.++.++.++.|..+|.. ++...... .+...+.++...+++.+++ ++.++.|..+|.. +
T Consensus 96 ----~~~~~~~~~~~-~~~l~v~t~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~~~~g~l~v-gt~~~~l~~~d~~-g 166 (330)
T 3hxj_A 96 ----KKAIVSDFTIF-EDILYVTSMDGHLYAINTD-GTEKWRFK-TKKAIYATPIVSEDGTIYV-GSNDNYLYAINPD-G 166 (330)
T ss_dssp ---------CCEEEE-TTEEEEECTTSEEEEECTT-SCEEEEEE-CSSCCCSCCEECTTSCEEE-ECTTSEEEEECTT-S
T ss_pred ----CCCcccCceEE-CCEEEEEecCCEEEEEcCC-CCEEEEEc-CCCceeeeeEEcCCCEEEE-EcCCCEEEEECCC-C
Confidence 11111222233 7778899999999999998 77666555 4455566777777887665 7888999999988 5
Q ss_pred CccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEe
Q psy9770 524 PTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWD 603 (811)
Q Consensus 524 ~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd 603 (811)
.... ........+..+...+++.+++++ +.++.+|...............+.++...+++. |..++.++.|..+|
T Consensus 167 ~~~~--~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 167 TEKW--RFKTNDAITSAASIGKDGTIYFGS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAIN 241 (330)
T ss_dssp CEEE--EEECSSCCCSCCEECTTCCEEEES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEEC
T ss_pred CEeE--EEecCCCceeeeEEcCCCEEEEEe--CEEEEECCCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEEC
Confidence 4422 222333455666777788899888 889999933333333333445677888887765 55567778888887
Q ss_pred CCCCcEEEEecCCC-CeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcE
Q psy9770 604 SMSHSVVWSKDIAE-QAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYI 682 (811)
Q Consensus 604 ~~~~~~~~~~~~~~-~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I 682 (811)
. +++.++...... .+..+.+.+++ .|.+++.+|.|..+|. +++.+..+......+.++...++|+ |..++.+|.+
T Consensus 242 ~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~ 317 (330)
T 3hxj_A 242 P-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKF 317 (330)
T ss_dssp T-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCE
T ss_pred C-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeE
Confidence 4 566666544333 23445566566 5667788889999996 6777766665566677888878887 5557889999
Q ss_pred EEEEecC
Q psy9770 683 YVYEVSG 689 (811)
Q Consensus 683 ~iwd~~~ 689 (811)
++.....
T Consensus 318 ~~~~~~~ 324 (330)
T 3hxj_A 318 YALFNLE 324 (330)
T ss_dssp EEEEC--
T ss_pred EEEeccc
Confidence 9887654
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.28 E-value=5.5e-10 Score=116.84 Aligned_cols=227 Identities=9% Similarity=0.017 Sum_probs=157.3
Q ss_pred ceEEEEEEcCCCc--EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccc
Q psy9770 450 KYVTCLAFTQGGE--VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGY 527 (811)
Q Consensus 450 ~~v~~l~~s~~g~--llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~ 527 (811)
.......|+++|+ +++...++.|..|+.. ++. ..+. .+...+..+++.++|+++++...++.|.+|+.+ +....
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~~~-~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DVLL-DATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHL 120 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EEEE-ESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EEEe-CCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEE
Confidence 4467899999998 4488888999999984 543 3333 456778999999999988866667899999986 33311
Q ss_pred ee-eecc-ccCCeEEEeeCCCCeEEEE-----eC-------------CCeEEEEEccCCceeeeeecccceEEEEECCCC
Q psy9770 528 EA-QIAE-HLGGIRTVSEGRGSQLIVG-----TT-------------RNCILVGSLNLGFSPVVLGHTDELWALAAHPSL 587 (811)
Q Consensus 528 ~~-~~~~-~~~~v~~l~~~~~~~l~~~-----~~-------------~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~ 587 (811)
.. .... ....+..+++.+++.+++. +. .+.|+.++..++....+. .......++|+|++
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg 199 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDE 199 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTS
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCC
Confidence 11 1111 1234567888999998883 32 357888888666444444 55567899999999
Q ss_pred CeEEEEECC------CeEEEEeCCCCcEEEE--e--cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCC
Q psy9770 588 SQFLTAGFD------RIVQLWDSMSHSVVWS--K--DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDG 657 (811)
Q Consensus 588 ~~l~s~s~d------g~v~iwd~~~~~~~~~--~--~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~ 657 (811)
+.|+.+... +.|.+|++..+..... + .....+..++++++|++. +++. +.|.+||. +++.+..+..+
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~-~gv~~~~~-~g~~~~~~~~~ 276 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSG-TGVCVFDS-DGQLLGHIPTP 276 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCS-SEEEEECT-TSCEEEEEECS
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecC-CcEEEECC-CCCEEEEEECC
Confidence 988777665 7899999876542111 1 123445678999999944 4444 45999998 46776666655
Q ss_pred CCCeEEEEEccCCCEEEEEecCCcEEEEE
Q psy9770 658 NEPIQVVKFSPDGKLLALGSRDNYIYVYE 686 (811)
Q Consensus 658 ~~~i~~i~~spdg~~lasgs~dg~I~iwd 686 (811)
. .+..++|+++++.|+.++.++ ++.++
T Consensus 277 ~-~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 277 G-TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp S-CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred C-ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 4 588999999999888887654 44433
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.28 E-value=7.7e-10 Score=128.85 Aligned_cols=405 Identities=12% Similarity=0.113 Sum_probs=212.0
Q ss_pred CCeEEEEEeeecCCC-CccceEEccCCcEEEEec--cEEEEEeCCCCceEEecc-CCC----------Ce-EEEEEcCCC
Q psy9770 247 NKLKLDWVYGYRGKD-CRSNLYLLPTGEIVYFVA--AVAVLYNVEEQTQRHYLG-HTD----------DI-KCLSIHPNK 311 (811)
Q Consensus 247 ~~l~l~~v~g~~~~~-~~~~l~~spdg~~l~~~~--~~i~i~d~~~~~~~~~~~-h~~----------~V-~~la~spdg 311 (811)
..+++.|.+...... ......+ .+..||++. +.|+-+|..++++.--.. +.. .+ ..+++ ++
T Consensus 46 ~~l~~~W~~~~~~~~~~~~~P~v--~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 121 (689)
T 1yiq_A 46 GQLGLAWSYKLDLDRGVEATPIV--VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WK 121 (689)
T ss_dssp GGEEEEEEEECSSCSCCCCCCEE--ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ET
T ss_pred CCceEEEEEECCCCCCceecCEE--ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--EC
Confidence 346666766543211 1111111 244555543 688999998887643221 111 01 11222 35
Q ss_pred cEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecC-CCCcEEEEEeC---CCCceEEEEEcccC
Q psy9770 312 LLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKA-DGGTFLCAVDE---GNDYNISVWDWQKS 387 (811)
Q Consensus 312 ~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~-~dg~~Lasv~~---s~d~~i~vWd~~~~ 387 (811)
..|++++.++ .|..+|..+|+.+-.+....+......+..+|. .++..++..++ ..++.|..||.+++
T Consensus 122 g~v~v~~~dg--------~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG 193 (689)
T 1yiq_A 122 GKVYVGVLDG--------RLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETG 193 (689)
T ss_dssp TEEEEECTTS--------EEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred CEEEEEccCC--------EEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCC
Confidence 5778888888 999999999999987763201111111111110 04555443111 13789999999999
Q ss_pred CCcceEEEeeeCC-------------------------------CcEEEEEecCCCCCeEEEECCC--------------
Q psy9770 388 DRGHKITETKCSV-------------------------------DTVVAAEFHPLDRNNIVTCGKS-------------- 422 (811)
Q Consensus 388 ~~~~~~~~~~~~~-------------------------------~~V~~v~fsp~~~~ll~~~~d~-------------- 422 (811)
+ .+..+.... .....+++.|+++.+++..+++
T Consensus 194 ~---~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd 270 (689)
T 1yiq_A 194 K---EAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGD 270 (689)
T ss_dssp C---EEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSC
T ss_pred c---EEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCC
Confidence 9 666654210 0112578888777777776665
Q ss_pred -----cEEEEEEcCCceeeeecccccccCC--CCceEEEEEEcCCCc----EEEEcCCCcEEEEecCCceEEEEeecccc
Q psy9770 423 -----HINFWTIDAGGTLYKKQGIFEMIRD--KPKYVTCLAFTQGGE----VLSGDSNGNIIVWTRGSNTISKFIRNVHE 491 (811)
Q Consensus 423 -----~i~iwd~~~~~~~~~~~~~~~~l~~--~~~~v~~l~~s~~g~----llsg~~dg~I~vwd~~~~~~~~~~~~~h~ 491 (811)
.|..||..+|+.+...+........ ....+.......+|+ ++.++.+|.++++|..+|+.+........
T Consensus 271 ~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~ 350 (689)
T 1yiq_A 271 NLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQ 350 (689)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCC
T ss_pred ceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccc
Confidence 3999999999988776532111011 112222223333564 55889999999999999998866542221
Q ss_pred cceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccC--CeEEEeeCCC-CeEEEEeCCCeEEEEEccCCce
Q psy9770 492 GSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLG--GIRTVSEGRG-SQLIVGTTRNCILVGSLNLGFS 568 (811)
Q Consensus 492 ~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~--~v~~l~~~~~-~~l~~~~~~~~i~~~d~~~~~~ 568 (811)
.....+.. ..+.-+.... . .|...... .....+...+ .-..++++|+ +.+++.+.+....++......
T Consensus 351 ~w~~~~~~-~~~~pi~~~~---~--~~~~~~~~--~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~- 421 (689)
T 1yiq_A 351 SWTKGMDM-KTGRPILDEE---N--AAYWKNGK--RNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP- 421 (689)
T ss_dssp SSEEEEET-TTTEEEECHH---H--HCTTTSSS--CEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC-
T ss_pred ccccccCc-cCCCcccchh---h--ccccCCCC--eeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccc-
Confidence 11111110 0111111000 0 00000000 0111111111 1122455554 444444444333333222110
Q ss_pred eeeeecccceE---EEEECCCC---CeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEE
Q psy9770 569 PVVLGHTDELW---ALAAHPSL---SQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLV 642 (811)
Q Consensus 569 ~~~~~h~~~v~---~l~~sp~~---~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i 642 (811)
.+......+. .+...|.. ........+|.|..||+.+++.++......+.....+...+.++++|+.||.|+.
T Consensus 422 -~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a 500 (689)
T 1yiq_A 422 -KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIA 500 (689)
T ss_dssp -CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEE
T ss_pred -cccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEE
Confidence 0000000000 00000000 0000001258899999999999999877665555566778889999999999999
Q ss_pred EecCCcceeEEecCCCCC-eEEEEEccCCCE-EEEE
Q psy9770 643 MDSETREAYSIHTDGNEP-IQVVKFSPDGKL-LALG 676 (811)
Q Consensus 643 ~d~~~~~~~~~~~~~~~~-i~~i~~spdg~~-lasg 676 (811)
||.++|+.+..++..... -.-+.|..||+. +++.
T Consensus 501 ~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 501 YAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp EETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EECCCCccceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 999999999888754322 245778888874 4443
No 230
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.27 E-value=9e-06 Score=92.99 Aligned_cols=434 Identities=10% Similarity=-0.033 Sum_probs=253.8
Q ss_pred cCCcEEEEeccEEEEEeCCCCceEEe--ccCCCCeEEEEEcCCCcEEEEeec-cCCCCCCCCCeEEEEeCCCCcEEEEec
Q psy9770 270 PTGEIVYFVAAVAVLYNVEEQTQRHY--LGHTDDIKCLSIHPNKLLIATGQV-AGHDAREGKPHIRIWNSVSLFTVSIIG 346 (811)
Q Consensus 270 pdg~~l~~~~~~i~i~d~~~~~~~~~--~~h~~~V~~la~spdg~~Lasg~~-dg~~~~~~~~~I~iWd~~t~~~~~~l~ 346 (811)
|..-++++..+.|...++++...... ...-..+..|+|++++..|..... ++ .|..+++........+.
T Consensus 5 p~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~--------~I~r~~~~g~~~~~v~~ 76 (628)
T 4a0p_A 5 PEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLK--------TISRAFMNGSALEHVVE 76 (628)
T ss_dssp CCCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTT--------EEEEEETTSCSCEEEEC
T ss_pred CCcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCC--------eEEEEECCCCCcEEEEe
Confidence 44456666678999999987654332 223457889999997666655543 44 89999987655444443
Q ss_pred cCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC--CCcE
Q psy9770 347 IGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG--KSHI 424 (811)
Q Consensus 347 ~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~--d~~i 424 (811)
.-......|++.+ .++++..+ ....+.|.+.++.... ....+...-.....+++.|..+.++.+.. .+.|
T Consensus 77 --~g~~~P~GlAvD~-~~~~LY~t--D~~~~~I~v~~~dG~~---~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I 148 (628)
T 4a0p_A 77 --FGLDYPEGMAVDW-LGKNLYWA--DTGTNRIEVSKLDGQH---RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKI 148 (628)
T ss_dssp --SSCSCCCEEEEET-TTTEEEEE--ETTTTEEEEEETTSTT---CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred --CCCCCcceEEEEe-CCCEEEEE--ECCCCEEEEEecCCCc---EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEE
Confidence 2224567888887 13444444 5677899999987654 22222234456789999998888888863 4567
Q ss_pred EEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeecccccceEEEEEecC
Q psy9770 425 NFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKE 502 (811)
Q Consensus 425 ~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~d 502 (811)
...+++ |........ .-.....+++.+++. ++ +-...+.|..+|+..... ..+. ..-.....|++..
T Consensus 149 ~r~~~d-G~~~~~l~~-------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~-~~l~~P~glav~~- 217 (628)
T 4a0p_A 149 DRAAMD-GSERTTLVP-------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIA-DDLPHPFGLTQYQ- 217 (628)
T ss_dssp EEEETT-SCSCEEEEC-------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEE-ECCSCEEEEEEET-
T ss_pred EEEeCC-CCceEEEEC-------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEee-ccCCCceEEEEEC-
Confidence 666666 443332211 123478999999755 44 556678899999876544 3333 3344556788765
Q ss_pred CcEEEEecCCCcEEEEeCCCCCccceee-----------ecc-----------cc------------CCeEEEe-----e
Q psy9770 503 GSIISAGGKDGRLLQFDSNLQPTGYEAQ-----------IAE-----------HL------------GGIRTVS-----E 543 (811)
Q Consensus 503 g~~l~s~s~dg~I~~wd~~~~~~~~~~~-----------~~~-----------~~------------~~v~~l~-----~ 543 (811)
+.++++-...+.|...|..++....... +.. .. +...|.+ .
T Consensus 218 ~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l 297 (628)
T 4a0p_A 218 DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSL 297 (628)
T ss_dssp TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEE
T ss_pred CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEe
Confidence 5566655567888888864443211000 000 00 0011111 0
Q ss_pred CCC-------CeEEEEeCCCeEEEEEccCCce--eeee-ecccceEEEEECCCCCeEEEEE-CCCeEEEEeCCCCcEEEE
Q psy9770 544 GRG-------SQLIVGTTRNCILVGSLNLGFS--PVVL-GHTDELWALAAHPSLSQFLTAG-FDRIVQLWDSMSHSVVWS 612 (811)
Q Consensus 544 ~~~-------~~l~~~~~~~~i~~~d~~~~~~--~~~~-~h~~~v~~l~~sp~~~~l~s~s-~dg~v~iwd~~~~~~~~~ 612 (811)
.++ ..++..+....|+...+..... ..+. ..-..+.+++|.+....|+.+. ..+.|+.++.........
T Consensus 298 ~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v 377 (628)
T 4a0p_A 298 NADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTV 377 (628)
T ss_dssp CTTSSCEECCSSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cccCCcCccccceeeeeccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEE
Confidence 011 1122333344455444433211 1111 1224578899988766555554 467888888765432222
Q ss_pred ec-------CCCCeEEEEEcCCCCEEEEE-EeCCeEEEEecCCcceeEE-ecCCCCCeEEEEEcc-CCCEEEEEecCC--
Q psy9770 613 KD-------IAEQAQSATFSPDGSIIIVG-CIAGRWLVMDSETREAYSI-HTDGNEPIQVVKFSP-DGKLLALGSRDN-- 680 (811)
Q Consensus 613 ~~-------~~~~v~~~~~spdg~~la~g-~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~i~~sp-dg~~lasgs~dg-- 680 (811)
+. ....+..+++...++.|..+ ...+.|.+.++. |+.... +.........|++.| .|.++.+-....
T Consensus 378 ~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~ 456 (628)
T 4a0p_A 378 VVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSP 456 (628)
T ss_dssp EC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEE
T ss_pred EEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCC
Confidence 21 23468899999987766654 456789999986 444333 333445688999999 454444432222
Q ss_pred cEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEec-CCceEEEEECCC
Q psy9770 681 YIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNS-GDYELLYWNAGT 735 (811)
Q Consensus 681 ~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s-~Dg~i~iWd~~~ 735 (811)
.|...+++.. ....+ ....-...+.|++.++++.|..+. ..+.|...+++.
T Consensus 457 ~I~r~~~dG~--~~~~l--~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG 508 (628)
T 4a0p_A 457 KIERAALDGT--EREVL--FFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSG 508 (628)
T ss_dssp EEEEEETTSC--SCEEE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred eEEEEeCCCC--CcEEE--EeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 3444444432 22222 122344678999999877766554 457899999854
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.26 E-value=3.7e-11 Score=127.72 Aligned_cols=278 Identities=7% Similarity=-0.092 Sum_probs=178.4
Q ss_pred eEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeC--------CCCceEEEEEcccCCCcceEEEeeeC--
Q psy9770 330 HIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDE--------GNDYNISVWDWQKSDRGHKITETKCS-- 399 (811)
Q Consensus 330 ~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~--------s~d~~i~vWd~~~~~~~~~~~~~~~~-- 399 (811)
.|.++|..+++.+.++..+. .. .++|+| ||++|+.... ..++.|.+||..+.+ .+.++...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~--~P--~i~~sp--Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~---vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF--LS--LAVAGH--SGSDFALASTSFARSAKGKRTDYVEVFDPVTFL---PIADIELPDA 117 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT--TC--EEEECT--TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC---EEEEEEETTS
T ss_pred eEEEEECCCCeEEEEEeCCC--CC--ceEECC--CCCEEEEEcccccccccCCCCCEEEEEECCCCC---EEEEEECCCc
Confidence 68899999999999998543 33 799999 8888876321 247899999999999 88887654
Q ss_pred -----CCcEEEEEecCCCCCeEEEEC--CCcEEE--EEEcCCceeeeecccccccCCCCceEEEEEEcCCCc--EEEEcC
Q psy9770 400 -----VDTVVAAEFHPLDRNNIVTCG--KSHINF--WTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE--VLSGDS 468 (811)
Q Consensus 400 -----~~~V~~v~fsp~~~~ll~~~~--d~~i~i--wd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~--llsg~~ 468 (811)
......++|+|++++++++.. .+.+.+ +|..+ +.... . .+ |..+.|++. +++.+.
T Consensus 118 ~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~-v----~~------~~~~~p~g~~~~~~~~~ 183 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTK-S----AS------CFHIHPGAAATHYLGSC 183 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEE-C----SS------CCCCEEEETTEEECCCC
T ss_pred cccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEE-C----CC------ceEEccCCCeEEEEEcC
Confidence 134568999999999999875 356888 88764 22211 0 00 112234443 556777
Q ss_pred CCcEEEEecCC-----ceEEE----EeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeE
Q psy9770 469 NGNIIVWTRGS-----NTISK----FIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIR 539 (811)
Q Consensus 469 dg~I~vwd~~~-----~~~~~----~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~ 539 (811)
||.+.+.+..+ ++... .+. ....+. . .+++..++..+. +.|.+.|...........
T Consensus 184 dg~~~~vd~~~~~~~~~~v~~~~t~~i~-vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~--------- 248 (368)
T 1mda_H 184 PASLAASDLAAAPAAAGIVGAQCTGAQN-CSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAA--------- 248 (368)
T ss_dssp TTSCEEEECCSSCCCCEECCCCSCTTSC-BCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECC---------
T ss_pred CCCEEEEECccccccCCeEEEEeeeeee-CCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEE---------
Confidence 88888888876 43321 111 112233 3 555555444555 888888876433200000
Q ss_pred EEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEEC---------CCeEEEEeCCCCcEE
Q psy9770 540 TVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGF---------DRIVQLWDSMSHSVV 610 (811)
Q Consensus 540 ~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~---------dg~v~iwd~~~~~~~ 610 (811)
|.+.................++++|+++.++.+.. ++.+.++|+.+++.+
T Consensus 249 ---------------------~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv 307 (368)
T 1mda_H 249 ---------------------IDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS 307 (368)
T ss_dssp ---------------------CCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE
T ss_pred ---------------------EEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEE
Confidence 00000000000000111112579999987776543 235669999999999
Q ss_pred EEecCCCCeEEEEEcCCCCEEEEEEe--CCeEEEEecCCcceeEEecCCCCCeEEEEEc
Q psy9770 611 WSKDIAEQAQSATFSPDGSIIIVGCI--AGRWLVMDSETREAYSIHTDGNEPIQVVKFS 667 (811)
Q Consensus 611 ~~~~~~~~v~~~~~spdg~~la~g~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~s 667 (811)
..+........++|+|||+.++++.. ++.|.++|+.+++.+..+..... -..+++.
T Consensus 308 ~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~ 365 (368)
T 1mda_H 308 GPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQ 365 (368)
T ss_dssp ECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECC
T ss_pred EEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEee
Confidence 88877778999999999985554444 89999999999999999876543 3455554
No 232
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.26 E-value=9.2e-11 Score=124.95 Aligned_cols=171 Identities=11% Similarity=0.065 Sum_probs=134.9
Q ss_pred CeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCc-----------EEEEeccCCccccEEEEEEecCCCCcEEE
Q psy9770 301 DIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLF-----------TVSIIGIGEFERSISCLSFSKADGGTFLC 369 (811)
Q Consensus 301 ~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~-----------~~~~l~~~~h~~~V~~l~fs~~~dg~~La 369 (811)
.+..+++++.+.++++|+.++ +.||++.+.. ....+ .+.. |..|+| |+.+|+
T Consensus 39 ~~nlLais~~~gll~a~~~~~---------l~v~~~~~l~~~~~~~~~~~~~~~~~---~lp~-V~~l~f----d~~~L~ 101 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK---------AVVGELQLLRDHITSDSTPLTFKWEK---EIPD-VIFVCF----HGDQVL 101 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE---------EEEEEHHHHHHHHHSSSCCCCCSEEE---ECTT-EEEEEE----ETTEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE---------EEEEEhhHhhhhhccccccccceEEe---eCCC-eeEEEE----CCCEEE
Confidence 689999999999999999876 8889876443 11222 3455 999999 468888
Q ss_pred EEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCC
Q psy9770 370 AVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKP 449 (811)
Q Consensus 370 sv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~ 449 (811)
+ + .++.|++||+.+.. .......|...+..+.+.+. .+++...||.|.+|++.++.... +.
T Consensus 102 v--~-~~~~l~v~dv~sl~---~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----------~~ 162 (388)
T 1xip_A 102 V--S-TRNALYSLDLEELS---EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----------LA 162 (388)
T ss_dssp E--E-ESSEEEEEESSSTT---CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----------EE
T ss_pred E--E-cCCcEEEEEchhhh---ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----------cc
Confidence 6 3 78999999999887 56667778888998888763 37778889999999998655432 12
Q ss_pred ceEEEEEEcCCCcEEEEcCCCcEEEEecCCceE--EEEee-----c---ccccceEEEEEecCCcEEEE
Q psy9770 450 KYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTI--SKFIR-----N---VHEGSVFSICVLKEGSIISA 508 (811)
Q Consensus 450 ~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~--~~~~~-----~---~h~~~V~~l~~s~dg~~l~s 508 (811)
..|.|++|+|+| ++.|..||++++|+...++. ...+. . +|...|.+|+|.+++.++++
T Consensus 163 ~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 163 QNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ESEEEEEECSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CCceEEEEcCCc-eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 359999999999 77899999999999887775 55552 1 37788999999999988874
No 233
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.23 E-value=8.7e-10 Score=129.28 Aligned_cols=249 Identities=10% Similarity=0.030 Sum_probs=154.8
Q ss_pred CCceEEEEEEcCCCcEE--EE----cCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCC
Q psy9770 448 KPKYVTCLAFTQGGEVL--SG----DSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSN 521 (811)
Q Consensus 448 ~~~~v~~l~~s~~g~ll--sg----~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~ 521 (811)
+...+..++|+|||+.+ +. +....|++||+.+++.+.... +......++|+ ||+.|+.+..+.. .
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~--~~~k~~~~~Ws-Dg~~l~y~~~~~~------~ 197 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL--KDVKFSGISWL-GNEGFFYSSYDKP------D 197 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE--EEEESCCCEEE-TTTEEEEEESSCC------C
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc--CCceeccEEEe-CCCEEEEEEecCc------c
Confidence 44568889999999944 22 233579999999998655421 22223567899 9998887776632 0
Q ss_pred CCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCce---eeee--e-cccceEEEEECCCCCeEEEEEC
Q psy9770 522 LQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFS---PVVL--G-HTDELWALAAHPSLSQFLTAGF 595 (811)
Q Consensus 522 ~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~---~~~~--~-h~~~v~~l~~sp~~~~l~s~s~ 595 (811)
.... -.......|++|++.+... .+.. . |...+..+.++||+++|+....
T Consensus 198 ~~~~------------------------~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~ 253 (693)
T 3iuj_A 198 GSEL------------------------SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAA 253 (693)
T ss_dssp -------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEE
T ss_pred cccc------------------------cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEc
Confidence 0000 0000112344444443321 1111 2 3345678899999998765442
Q ss_pred ----CCeEEEEeCCCC--cEEEEecCCCCeEEEEEcCCCCEEEEEEeC----CeEEEEecCCcce--eEEecCCCCCeEE
Q psy9770 596 ----DRIVQLWDSMSH--SVVWSKDIAEQAQSATFSPDGSIIIVGCIA----GRWLVMDSETREA--YSIHTDGNEPIQV 663 (811)
Q Consensus 596 ----dg~v~iwd~~~~--~~~~~~~~~~~v~~~~~spdg~~la~g~~d----g~i~i~d~~~~~~--~~~~~~~~~~i~~ 663 (811)
+..|.++|+.++ +.............. ++++|..|+..+.. +.|..+|+.++.. ...+..+...+.
T Consensus 254 ~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~- 331 (693)
T 3iuj_A 254 NSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL- 331 (693)
T ss_dssp SSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-
T ss_pred cCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-
Confidence 358999999776 333333444444444 67777777666543 5799999987654 344555555554
Q ss_pred EEEccCCCEEEEEecCC---cEEEEEecCCCcceeEEEEec-CCCCCeeEEEeCCCCCeEEEecCC----ceEEEEECCC
Q psy9770 664 VKFSPDGKLLALGSRDN---YIYVYEVSGDSRKYSRVGRCT-GHSSFITHLDWSEDSMYIRSNSGD----YELLYWNAGT 735 (811)
Q Consensus 664 i~~spdg~~lasgs~dg---~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~spdg~~L~s~s~D----g~i~iWd~~~ 735 (811)
.|++++++|+....++ .|++|++..+ ....+. .+.+.+..+.++++++.|+....+ ++|..||+.+
T Consensus 332 -~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-----~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 332 -TVHSGSGYLFAEYMVDATARVEQFDYEGK-----RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp -EEEEETTEEEEEEEETTEEEEEEECTTSC-----EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred -EEEEECCEEEEEEEECCeeEEEEEECCCC-----eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 8999999888776544 5888887743 122232 244567788888888877655444 7899999987
Q ss_pred Cc
Q psy9770 736 CR 737 (811)
Q Consensus 736 ~~ 737 (811)
++
T Consensus 406 g~ 407 (693)
T 3iuj_A 406 GA 407 (693)
T ss_dssp CC
T ss_pred Ce
Confidence 75
No 234
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.23 E-value=5.8e-06 Score=94.49 Aligned_cols=434 Identities=11% Similarity=-0.014 Sum_probs=247.1
Q ss_pred EEEEeccEEEEEeCCCCc--eEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcE-EEEeccCCc
Q psy9770 274 IVYFVAAVAVLYNVEEQT--QRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFT-VSIIGIGEF 350 (811)
Q Consensus 274 ~l~~~~~~i~i~d~~~~~--~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~-~~~l~~~~h 350 (811)
++++..+.|.+.++.+.. ...+.........|+|++.+..|....... ..|..+++..... ...+. .-
T Consensus 12 ~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~-------~~I~r~~~~g~~~~~~v~~--~~ 82 (619)
T 3s94_A 12 LLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSE-------EAIKRTEFNKTESVQNVVV--SG 82 (619)
T ss_dssp EEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTT-------TEEEEEEC-----CEEEEC--SS
T ss_pred EEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCC-------CeEEEEEccCCCceEEEEe--CC
Confidence 455556788899998753 333444556788999999777776665432 2899999876532 22332 22
Q ss_pred cccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECC--CcEEEEE
Q psy9770 351 ERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGK--SHINFWT 428 (811)
Q Consensus 351 ~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d--~~i~iwd 428 (811)
-.....|++.+ .+..|+.. ....+.|.+.++.... ....+...-.....+++.|.++.++.+... +.|...+
T Consensus 83 ~~~P~GlAvD~--~~~~ly~~-d~~~~~I~v~~~dG~~---~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~ 156 (619)
T 3s94_A 83 LLSPDGLACDW--LGEKLYWT-DSETNRIEVSNLDGSL---RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAG 156 (619)
T ss_dssp CSCEEEEEEET--TTTEEEEE-ETTTTEEEEEETTSCS---CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CCCcCeEEEEe--cCCEEEEE-eCCCCEEEEEECCCCC---EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEE
Confidence 35788999998 44444433 5778999999998654 222222344567889999988888888643 4555555
Q ss_pred EcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEE
Q psy9770 429 IDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSII 506 (811)
Q Consensus 429 ~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l 506 (811)
++ |....... ...-.....+++.+++. ++ +-...+.|..+|+.......... .......+|++..+ .++
T Consensus 157 ~d-G~~~~~l~------~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~~~~P~gi~~~~~-~ly 227 (619)
T 3s94_A 157 MD-GSSRFIII------NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFED-ILY 227 (619)
T ss_dssp TT-SCSCEEEE------CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSS-EEE
T ss_pred CC-CCceEEEE------eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe-CCCCCceEEEEeCC-EEE
Confidence 55 43332221 11123478999998654 44 65667889999987654433332 22223356677655 555
Q ss_pred EEecCCCcEEEEeCCCCCccce----------e-eec------c------ccC-------------CeEEEe-----eCC
Q psy9770 507 SAGGKDGRLLQFDSNLQPTGYE----------A-QIA------E------HLG-------------GIRTVS-----EGR 545 (811)
Q Consensus 507 ~s~s~dg~I~~wd~~~~~~~~~----------~-~~~------~------~~~-------------~v~~l~-----~~~ 545 (811)
++-...+.|...|..++..... . .+. . ..+ ...|.+ ..+
T Consensus 228 ~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~ 307 (619)
T 3s94_A 228 WTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLE 307 (619)
T ss_dssp EECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCT
T ss_pred EecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecc
Confidence 5555677888888754432100 0 000 0 000 011111 001
Q ss_pred --------CCeEEEEeCCCeEEEEEccCCcee-eee--ecccceEEEEECCCCCeEEEE-ECCCeEEEEeCCCCcEEEEe
Q psy9770 546 --------GSQLIVGTTRNCILVGSLNLGFSP-VVL--GHTDELWALAAHPSLSQFLTA-GFDRIVQLWDSMSHSVVWSK 613 (811)
Q Consensus 546 --------~~~l~~~~~~~~i~~~d~~~~~~~-~~~--~h~~~v~~l~~sp~~~~l~s~-s~dg~v~iwd~~~~~~~~~~ 613 (811)
...++..+..+.|+..++...... ... ..-..+.+++|.+.+..|+.+ ...+.|+.+++.........
T Consensus 308 d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~ 387 (619)
T 3s94_A 308 NGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVV 387 (619)
T ss_dssp TSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred cCcccCCCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEE
Confidence 122444445566777777654221 111 123457789999865555544 45788999998764433223
Q ss_pred cC-CCCeEEEEEcCCCCEEEEE-EeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEec--CCcEEEEEecC
Q psy9770 614 DI-AEQAQSATFSPDGSIIIVG-CIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSR--DNYIYVYEVSG 689 (811)
Q Consensus 614 ~~-~~~v~~~~~spdg~~la~g-~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~--dg~I~iwd~~~ 689 (811)
.. -..+..+++.+.+..|+.+ ...+.|.+.++........+...-.....|++.|...+|+.... ...|...+++.
T Consensus 388 ~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG 467 (619)
T 3s94_A 388 TAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDG 467 (619)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred ECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCC
Confidence 22 2467789998765555554 45678999998755433333334456789999997555555543 24565555543
Q ss_pred CCcceeEEEEecCCCCCeeEEEeCCCCCeEEEec-CCceEEEEECCC
Q psy9770 690 DSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNS-GDYELLYWNAGT 735 (811)
Q Consensus 690 ~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s-~Dg~i~iWd~~~ 735 (811)
.. . ..+ ....-...+.|++++++..|..+. ..+.|...+++.
T Consensus 468 ~~-~-~~l--~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG 510 (619)
T 3s94_A 468 SD-R-VVL--VNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDG 510 (619)
T ss_dssp CS-C-EEE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSS
T ss_pred Cc-c-EEE--EeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCC
Confidence 22 1 121 223345678999998776666554 457888888864
No 235
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.22 E-value=2.1e-06 Score=98.19 Aligned_cols=445 Identities=9% Similarity=-0.010 Sum_probs=255.1
Q ss_pred cceEEccCCcEEEEec---cEEEEEeCCCCc--eEEeccCCCCeEEEEEcCCCcEEEEee-ccCCCCCCCCCeEEEEeCC
Q psy9770 264 SNLYLLPTGEIVYFVA---AVAVLYNVEEQT--QRHYLGHTDDIKCLSIHPNKLLIATGQ-VAGHDAREGKPHIRIWNSV 337 (811)
Q Consensus 264 ~~l~~spdg~~l~~~~---~~i~i~d~~~~~--~~~~~~h~~~V~~la~spdg~~Lasg~-~dg~~~~~~~~~I~iWd~~ 337 (811)
..|+|.+.+..||.++ +.|..+++.+.. +..+...-.....||+.+.+..|..+. ..+ .|.+.+..
T Consensus 43 ~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~--------~I~v~~~d 114 (619)
T 3s94_A 43 AAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETN--------RIEVSNLD 114 (619)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTT--------EEEEEETT
T ss_pred EEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCC--------EEEEEECC
Confidence 4678888888888774 688899988763 333433346789999999666555554 344 89999997
Q ss_pred CCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEE
Q psy9770 338 SLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIV 417 (811)
Q Consensus 338 t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~ 417 (811)
.......+. ..-.....|++.| .+|.+..+ +-+..+.|...++.... ........-.....+++.++++.+++
T Consensus 115 G~~~~~l~~--~~l~~P~~Iavdp-~~g~ly~t-D~g~~~~I~r~~~dG~~---~~~l~~~~~~~P~Glald~~~~~LY~ 187 (619)
T 3s94_A 115 GSLRKVLFW--QELDQPRAIALDP-SSGFMYWT-DWGEVPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYW 187 (619)
T ss_dssp SCSCEEEEC--SSCSCCCCEEEET-TTTEEEEE-ECSSSCEEEEEETTSCS---CEEEECSSCSSEEEEEEETTTTEEEE
T ss_pred CCCEEEEEe--CCCCCCceEEEec-CCCeEEEe-ccCCCCEEEEEECCCCc---eEEEEeCCCCCCcEEEEEccCCEEEE
Confidence 654433332 3345577899998 23444443 33335677777776544 22223334456789999998888888
Q ss_pred EEC-CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeec--------
Q psy9770 418 TCG-KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRN-------- 488 (811)
Q Consensus 418 ~~~-d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~-------- 488 (811)
+-. .+.|...+++ +........ .. ..| ...+++..+.-+++-...+.|...|..+++....+..
T Consensus 188 aD~~~~~I~~~~~d-G~~~~~~~~--~~-~~~---P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i 260 (619)
T 3s94_A 188 ADAKLNFIHKSNLD-GTNRQAVVK--GS-LPH---PFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDI 260 (619)
T ss_dssp EETTTCCEEEESSS-CCEEC---------------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEE
T ss_pred EeCCCCeEEEecCC-CCccEEEEe--CC-CCC---ceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEE
Confidence 866 4678888876 433322211 01 122 2456676662244666678888888876653332210
Q ss_pred --ccc--------------cceEEEEE-----------ecCC---------------cEEEEecCCCcEEEEeCCCCCcc
Q psy9770 489 --VHE--------------GSVFSICV-----------LKEG---------------SIISAGGKDGRLLQFDSNLQPTG 526 (811)
Q Consensus 489 --~h~--------------~~V~~l~~-----------s~dg---------------~~l~s~s~dg~I~~wd~~~~~~~ 526 (811)
.|. +....+|+ .|.| .+|+ -+..+.|+..++......
T Consensus 261 ~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll-~~~~~~i~~i~l~~~~~~ 339 (619)
T 3s94_A 261 HAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLL-LARRTDLRRISLDTPDFT 339 (619)
T ss_dssp EECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEE-EEESSCEEEEESSSTTCC
T ss_pred EEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEE-EEcccceEEEecCCCccc
Confidence 010 01111222 1211 1222 122345666666544331
Q ss_pred ceeeec-cccCCeEEEeeCC-CCeEEEEe-CCCeEEEEEccCCceee-eeecccceEEEEECCCCC-eEEEEECCCeEEE
Q psy9770 527 YEAQIA-EHLGGIRTVSEGR-GSQLIVGT-TRNCILVGSLNLGFSPV-VLGHTDELWALAAHPSLS-QFLTAGFDRIVQL 601 (811)
Q Consensus 527 ~~~~~~-~~~~~v~~l~~~~-~~~l~~~~-~~~~i~~~d~~~~~~~~-~~~h~~~v~~l~~sp~~~-~l~s~s~dg~v~i 601 (811)
...++ .....+..+++.+ ++.++.+. ..+.|+.++++...... +...-....++++.+.+. ++++-+..+.|.+
T Consensus 340 -~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v 418 (619)
T 3s94_A 340 -DIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEV 418 (619)
T ss_dssp -CEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred -eeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEE
Confidence 11111 1223466777765 56666654 46789999887753333 333335677899987554 5555556789999
Q ss_pred EeCCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEe--CCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEec
Q psy9770 602 WDSMSHSVVWSK-DIAEQAQSATFSPDGSIIIVGCI--AGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSR 678 (811)
Q Consensus 602 wd~~~~~~~~~~-~~~~~v~~~~~spdg~~la~g~~--dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~ 678 (811)
.++......... ..-.....+++.|....|+.... .+.|...++............-...+.|++++++..|+.+..
T Consensus 419 ~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 419 TRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp EETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEEC
Confidence 998765432222 23357899999997556666543 357777777644333333334456789999997777777654
Q ss_pred -CCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCc
Q psy9770 679 -DNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCR 737 (811)
Q Consensus 679 -dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~ 737 (811)
.+.|..+++...... ..+. ..-....+|+...+ .+..+-...+.|...|..+|.
T Consensus 499 ~~~~I~~~~~dG~~~~-~~~~---~~l~~P~glav~~~-~ly~tD~~~~~I~~~~k~~g~ 553 (619)
T 3s94_A 499 KTDKIEVMNTDGTGRR-VLVE---DKIPHIFGFTLLGD-YVYWTDWQRRSIERVHKRSAE 553 (619)
T ss_dssp TTTEEEEEESSSCCCE-EEEE---CCCCSSCCEEEETT-EEEEECTTSSCEEEEESSSCC
T ss_pred CCCEEEEEecCCCceE-EEec---cCCCCcEEEEEECC-EEEEeecCCCeEEEEEcCCCc
Confidence 467888888654322 1211 12222335555433 344444456678888877763
No 236
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.22 E-value=1.9e-10 Score=122.21 Aligned_cols=262 Identities=11% Similarity=0.002 Sum_probs=168.8
Q ss_pred cEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEec----------CCCcEEEEeCCCCCccceeeeccccCCeEE
Q psy9770 471 NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGG----------KDGRLLQFDSNLQPTGYEAQIAEHLGGIRT 540 (811)
Q Consensus 471 ~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s----------~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~ 540 (811)
.|.++|..+++.+..+..+. .+ .+.++|||+.++.+. .++.|.+||+.+.+......+.+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~---- 119 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR---- 119 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS----
T ss_pred eEEEEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc----
Confidence 88899999999999988444 34 799999999888775 36889999998877622222210000
Q ss_pred EeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEEC--CCeEEE--EeCCCCcEEEEecCC
Q psy9770 541 VSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGF--DRIVQL--WDSMSHSVVWSKDIA 616 (811)
Q Consensus 541 l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~--dg~v~i--wd~~~~~~~~~~~~~ 616 (811)
... ......++++|||++++.+.. +..|.+ +|+.+ +..+...
T Consensus 120 -----------------------------~~~--g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~ 165 (368)
T 1mda_H 120 -----------------------------FSV--GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA 165 (368)
T ss_dssp -----------------------------CCB--SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS
T ss_pred -----------------------------ccc--CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC
Confidence 000 012346889999999998875 467888 99877 3344332
Q ss_pred CCeEEEEEcCCCC-EEEEEEeCCeEEEEecCC-----cceeE----EecCCCCCeEEEEEccCCCEEEEEecCCcEEEEE
Q psy9770 617 EQAQSATFSPDGS-IIIVGCIAGRWLVMDSET-----REAYS----IHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYE 686 (811)
Q Consensus 617 ~~v~~~~~spdg~-~la~g~~dg~i~i~d~~~-----~~~~~----~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd 686 (811)
+. ..+.|+|+ .+++.+.||.+.+.|+.+ ++... .+.....+. . ++++..++..+. +.|.+.|
T Consensus 166 ~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD 237 (368)
T 1mda_H 166 SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGD 237 (368)
T ss_dssp SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEE
T ss_pred Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEE
Confidence 22 22334443 344456678888888876 44331 122223343 3 666666666666 8999999
Q ss_pred ecCCCcceeEEEEecC-------C---CCCeeEEEeCCCCCeEEEecC---------CceEEEEECCCCcccCCCCCccc
Q psy9770 687 VSGDSRKYSRVGRCTG-------H---SSFITHLDWSEDSMYIRSNSG---------DYELLYWNAGTCRQIPQSSQLRD 747 (811)
Q Consensus 687 ~~~~~~~~~~~~~~~~-------h---~~~V~~l~~spdg~~L~s~s~---------Dg~i~iWd~~~~~~~~~~~~~~~ 747 (811)
+..... ..+..+.- + ......+.|+||++.|+++.. ++.+.++|+.+.+.+..+..
T Consensus 238 ~~~~~~--~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v--- 312 (368)
T 1mda_H 238 IPAAGA--TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN--- 312 (368)
T ss_dssp CCSSCC--EEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE---
T ss_pred CCCCcc--eEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC---
Confidence 875321 11111110 0 111122689999998876532 24566999999988776532
Q ss_pred eeEeccceeeccceeeeCCCCCCCCccceEEecCCCC-EEEEEc-CCCcEEEEeCCCCCCCCcc
Q psy9770 748 VVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDAR-VIATGD-DFGKLKLYSYPAVQPKLCL 809 (811)
Q Consensus 748 ~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~-~Las~~-~dg~v~vw~~~~~~~~~~~ 809 (811)
+.....|+|+|||+ ++++.. .++.|.|+|+.+++.++++
T Consensus 313 -----------------------g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I 353 (368)
T 1mda_H 313 -----------------------GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353 (368)
T ss_dssp -----------------------EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEEC
T ss_pred -----------------------CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEE
Confidence 22478899999998 455555 5899999999998877655
No 237
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.19 E-value=7.4e-10 Score=118.02 Aligned_cols=254 Identities=8% Similarity=-0.014 Sum_probs=149.9
Q ss_pred CccceEEccCCcEEEEec----cEEEEEeCCCCceEEec-------cCCCCeEEEEEcCCCcEEEEeec-----cCCCCC
Q psy9770 262 CRSNLYLLPTGEIVYFVA----AVAVLYNVEEQTQRHYL-------GHTDDIKCLSIHPNKLLIATGQV-----AGHDAR 325 (811)
Q Consensus 262 ~~~~l~~spdg~~l~~~~----~~i~i~d~~~~~~~~~~-------~h~~~V~~la~spdg~~Lasg~~-----dg~~~~ 325 (811)
....|+++|+|+++++.. +.+.||.+.+++...+. +|-..+..++|+++|+++++-.. ++
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~---- 93 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP---- 93 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC----
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC----
Confidence 457899999999877642 21344544455444332 34568999999999987776543 24
Q ss_pred CCCCeEEEEeCCCCcEEEEeccC----CccccEEEEEEecCCCCcEEEEEeCC---CCceEEEEEcccCCCcceEEEeee
Q psy9770 326 EGKPHIRIWNSVSLFTVSIIGIG----EFERSISCLSFSKADGGTFLCAVDEG---NDYNISVWDWQKSDRGHKITETKC 398 (811)
Q Consensus 326 ~~~~~I~iWd~~t~~~~~~l~~~----~h~~~V~~l~fs~~~dg~~Lasv~~s---~d~~i~vWd~~~~~~~~~~~~~~~ 398 (811)
.|.+||+.+++.+..+.+. .+...+..++|++ ++|..+++ .. .++.|.+||+.+++ ....+..
T Consensus 94 ----~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~-~~g~~yvt--d~~~~~~~~i~v~d~~~g~---~~r~~~~ 163 (343)
T 2qe8_A 94 ----KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDL-IHNFVYIS--DPAPDDKAALIRVDLQTGL---AARVLQG 163 (343)
T ss_dssp ----EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEET-TTTEEEEE--ECCSGGGCEEEEEETTTCC---EEEECTT
T ss_pred ----eEEEEECCCCeEEEEEECChhhcccccccceEEEec-CCCEEEEE--cCccCCCCeEEEEECCCCC---EEEEecC
Confidence 8999999999988877642 2234568999997 23444444 34 67899999999887 5554544
Q ss_pred CCCcEE-EEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCCC-cEEEE
Q psy9770 399 SVDTVV-AAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSNG-NIIVW 475 (811)
Q Consensus 399 ~~~~V~-~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg-~I~vw 475 (811)
|..... ...|.+++..+.+...++.+..|. ..+..++|+|+|+ ++.+...+ .|+.+
T Consensus 164 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~---------------------~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 164 YPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH---------------------LGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp CTTTSCCSCCCEETTEECBEECTTSCEECCC---------------------CCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CCcccccccceeECCEEEEeccCCCceecee---------------------cccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 322100 022333333222233344443331 1267899999997 45555444 56555
Q ss_pred ecC---Cc-----eEEE--EeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCC
Q psy9770 476 TRG---SN-----TISK--FIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGR 545 (811)
Q Consensus 476 d~~---~~-----~~~~--~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~ 545 (811)
+.. .+ +... ... ++.+....++++++|+++++...++.|.+||...++....... ........+++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~-~~~~~p~~va~~~ 300 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD-EKLSWTDSFNFGS 300 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC-GGGSCEEEEEECT
T ss_pred EHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC-CceecCCeeEECC
Confidence 532 11 0000 111 3444567799999999999888899999999843333111111 1123345555554
Q ss_pred CCeEEEE
Q psy9770 546 GSQLIVG 552 (811)
Q Consensus 546 ~~~l~~~ 552 (811)
++.+++.
T Consensus 301 ~g~l~v~ 307 (343)
T 2qe8_A 301 DGYLYFD 307 (343)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 4444443
No 238
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.19 E-value=9.1e-10 Score=129.11 Aligned_cols=242 Identities=11% Similarity=0.097 Sum_probs=153.8
Q ss_pred ccccceEEEEEecCCcEEEE-----ecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEc
Q psy9770 489 VHEGSVFSICVLKEGSIISA-----GGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSL 563 (811)
Q Consensus 489 ~h~~~V~~l~~s~dg~~l~s-----~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~ 563 (811)
.|...+..++|+|||++|+- |+....|++||+.+++. ....+
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~-~~~~~-------------------------------- 172 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP-LETPL-------------------------------- 172 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE-EEEEE--------------------------------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC-Ccccc--------------------------------
Confidence 34556888899999998873 33335788888877654 10000
Q ss_pred cCCceeeeeecccceEEEEECCCCCeEEEEECCC-------------eEEEEeCCCCc----EEEEec--CCCCeEEEEE
Q psy9770 564 NLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDR-------------IVQLWDSMSHS----VVWSKD--IAEQAQSATF 624 (811)
Q Consensus 564 ~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg-------------~v~iwd~~~~~----~~~~~~--~~~~v~~~~~ 624 (811)
+......++|+ |++.|+.++.+. .|++|++.+.. ++.... +......+.|
T Consensus 173 ----------~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~ 241 (693)
T 3iuj_A 173 ----------KDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATV 241 (693)
T ss_dssp ----------EEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEE
T ss_pred ----------CCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEE
Confidence 00012356677 788777777663 49999998765 232222 2345788999
Q ss_pred cCCCCEEEEEEeC----CeEEEEecCCcc-eeEEecCCCCCeEEEEEccCCCEEEEEec-C---CcEEEEEecCCCccee
Q psy9770 625 SPDGSIIIVGCIA----GRWLVMDSETRE-AYSIHTDGNEPIQVVKFSPDGKLLALGSR-D---NYIYVYEVSGDSRKYS 695 (811)
Q Consensus 625 spdg~~la~g~~d----g~i~i~d~~~~~-~~~~~~~~~~~i~~i~~spdg~~lasgs~-d---g~I~iwd~~~~~~~~~ 695 (811)
+|||++|+..... +.|+++|+.++. ....+..+....... |+++|..|+..+. + +.|.++++.++...
T Consensus 242 SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~-- 318 (693)
T 3iuj_A 242 TEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA-- 318 (693)
T ss_dssp CTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG--
T ss_pred cCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc--
Confidence 9999999776543 489999998764 344555555555554 6777776665543 2 56888888875421
Q ss_pred EEEEecCCCCCeeEEEeCCCCCeEEEecCCc---eEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCC
Q psy9770 696 RVGRCTGHSSFITHLDWSEDSMYIRSNSGDY---ELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGT 772 (811)
Q Consensus 696 ~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg---~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~ 772 (811)
....+..|...+. .|++++++|+....++ .|++|++.++.. ..+. + .+..
T Consensus 319 ~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~-~~l~---------------~---------p~~~ 371 (693)
T 3iuj_A 319 HWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV-REVA---------------L---------PGLG 371 (693)
T ss_dssp GCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE-EEEC---------------C---------SSSS
T ss_pred ccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee-EEee---------------c---------CCCc
Confidence 1123455666654 8999999887765543 688998875432 1110 0 0123
Q ss_pred ccceEEecCCCCEEEEEcCC----CcEEEEeCCCCC
Q psy9770 773 DVNSCERSHDARVIATGDDF----GKLKLYSYPAVQ 804 (811)
Q Consensus 773 ~I~~l~~s~dg~~Las~~~d----g~v~vw~~~~~~ 804 (811)
.+..+.++++++.|+....+ +.|+.||+.+++
T Consensus 372 ~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 372 SVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred eEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 46677788888766654433 789999987765
No 239
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.18 E-value=4.8e-10 Score=119.48 Aligned_cols=269 Identities=12% Similarity=0.049 Sum_probs=166.3
Q ss_pred ccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEee-------eCCCcEEEEEecCCCCCeEEEE-C---
Q psy9770 352 RSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETK-------CSVDTVVAAEFHPLDRNNIVTC-G--- 420 (811)
Q Consensus 352 ~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~-------~~~~~V~~v~fsp~~~~ll~~~-~--- 420 (811)
..+..+++++ +|+++++.....++.++||.+.+++ +..+. .+...+..++|.+++. ++++. +
T Consensus 17 ~~p~~va~~~--~g~~~v~~~~~~~~~~~l~~~~~g~----~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~ 89 (343)
T 2qe8_A 17 LAPGNITLTP--DGRLFLSLHQFYQPEMQVAELTQDG----LIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQS 89 (343)
T ss_dssp SCEEEEEECT--TSCEEEEECGGGCCSCSEEEEETTE----EEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHH
T ss_pred CCcceEEECC--CCCEEEEeCCCCCCceEEEEECCCC----eecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCc
Confidence 6789999999 8998887422223336666665433 33221 2446899999999754 55544 3
Q ss_pred --CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCC-CcE-EEEc---CCCcEEEEecCCceEEEEeecccccc
Q psy9770 421 --KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQG-GEV-LSGD---SNGNIIVWTRGSNTISKFIRNVHEGS 493 (811)
Q Consensus 421 --d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~-g~l-lsg~---~dg~I~vwd~~~~~~~~~~~~~h~~~ 493 (811)
+..|.+||+.+++.+...... .....+...+..+++.++ +.+ ++.. .++.|.+||..+++....+. .|...
T Consensus 90 ~~~~~i~~~d~~tg~~~~~~~~~-~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~-~~~~~ 167 (343)
T 2qe8_A 90 KSVPKLVAWDTLNNQLSRVIYLP-PPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ-GYPGI 167 (343)
T ss_dssp TSCCEEEEEETTTTEEEEEEECC-TTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT-TCTTT
T ss_pred CCCCeEEEEECCCCeEEEEEECC-hhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec-CCCcc
Confidence 478999999866644433211 110122345688999975 454 4544 67899999999888776654 33221
Q ss_pred eE-EEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeee
Q psy9770 494 VF-SICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL 572 (811)
Q Consensus 494 V~-~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~ 572 (811)
.. ...+..+|..+.+.+.++.+..|..
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~---------------------------------------------------- 195 (343)
T 2qe8_A 168 APEDIDLVIDGVPVQIGQPDGTVIRPHL---------------------------------------------------- 195 (343)
T ss_dssp SCCSCCCEETTEECBEECTTSCEECCCC----------------------------------------------------
T ss_pred cccccceeECCEEEEeccCCCceeceec----------------------------------------------------
Confidence 10 1334456666665666666544421
Q ss_pred ecccceEEEEECCCCCeEEEEECCC-eEEEEeCC---CCc--------EEEEecCCCCeEEEEEcCCCCEEEEEEeCCeE
Q psy9770 573 GHTDELWALAAHPSLSQFLTAGFDR-IVQLWDSM---SHS--------VVWSKDIAEQAQSATFSPDGSIIIVGCIAGRW 640 (811)
Q Consensus 573 ~h~~~v~~l~~sp~~~~l~s~s~dg-~v~iwd~~---~~~--------~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i 640 (811)
.+..|+++|+++.|+.+..++ .|..++.. .+. .+...........++++++|.++++...++.|
T Consensus 196 ----~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V 271 (343)
T 2qe8_A 196 ----GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAI 271 (343)
T ss_dssp ----CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEE
T ss_pred ----ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeE
Confidence 234678888888777776655 44444321 110 00111223356679999999999888889999
Q ss_pred EEEecCCcceeEEecC-CCCCeEEEEEccCCCEEEEEecCCcEEEE
Q psy9770 641 LVMDSETREAYSIHTD-GNEPIQVVKFSPDGKLLALGSRDNYIYVY 685 (811)
Q Consensus 641 ~i~d~~~~~~~~~~~~-~~~~i~~i~~spdg~~lasgs~dg~I~iw 685 (811)
.+||..+++....... +......++|.++|+++++.+..+.+.+|
T Consensus 272 ~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 272 GVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp EEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred EEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 9999855664433332 23568899999999888877655444333
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.13 E-value=4.8e-08 Score=104.06 Aligned_cols=267 Identities=10% Similarity=-0.029 Sum_probs=164.2
Q ss_pred eEEEEeCCC-----CcEEEEeccCCccccEEEE-----------EEe--cCCCCcEEEEEeCCCCceEEEEEcccC-CCc
Q psy9770 330 HIRIWNSVS-----LFTVSIIGIGEFERSISCL-----------SFS--KADGGTFLCAVDEGNDYNISVWDWQKS-DRG 390 (811)
Q Consensus 330 ~I~iWd~~t-----~~~~~~l~~~~h~~~V~~l-----------~fs--~~~dg~~Lasv~~s~d~~i~vWd~~~~-~~~ 390 (811)
.|.+.|+.. ++.++.+.+..-....... .++ + ++++|+ +.+..++.|.|+|+.+. ..+
T Consensus 44 ~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~--~r~~l~-v~~l~s~~I~viD~~t~p~~p 120 (462)
T 2ece_A 44 FIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNI--ERRFLI-VPGLRSSRIYIIDTKPNPREP 120 (462)
T ss_dssp EEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTC--CSCEEE-EEBTTTCCEEEEECCSCTTSC
T ss_pred eEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCc--cCCEEE-EccCCCCeEEEEECCCCCCCc
Confidence 566666665 6677766643322222223 336 5 678887 44788999999999754 212
Q ss_pred ceEEEee-------eCCCcEEEEEecCCCCCeEEEE-CC------CcEEEEEEcCCceeeeecccccccCCCCceEEEEE
Q psy9770 391 HKITETK-------CSVDTVVAAEFHPLDRNNIVTC-GK------SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLA 456 (811)
Q Consensus 391 ~~~~~~~-------~~~~~V~~v~fsp~~~~ll~~~-~d------~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~ 456 (811)
.....+. .....-..+...|++ +++++ ++ +.|.++|..+.+.+.....- .+....-..+.
T Consensus 121 ~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~----~~~~~~~Yd~~ 194 (462)
T 2ece_A 121 KIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKWEID----RGDQYLAYDFW 194 (462)
T ss_dssp EEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSB----CTTCCCCCCEE
T ss_pred eeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccC----CCCccccceEE
Confidence 2444442 112245677888977 54443 34 68999998877666544211 11112234688
Q ss_pred EcCCCcEEEEc--------------------CCCcEEEEecCCceEEEEeecc-cccceEEEEE--ecCCcEEEEec---
Q psy9770 457 FTQGGEVLSGD--------------------SNGNIIVWTRGSNTISKFIRNV-HEGSVFSICV--LKEGSIISAGG--- 510 (811)
Q Consensus 457 ~s~~g~llsg~--------------------~dg~I~vwd~~~~~~~~~~~~~-h~~~V~~l~~--s~dg~~l~s~s--- 510 (811)
|+|+++++..+ .+.+|.+||+.+++.+.++..+ .......+.| +|++++++.+.
T Consensus 195 ~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~ 274 (462)
T 2ece_A 195 WNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVS 274 (462)
T ss_dssp EETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEE
T ss_pred ECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeee
Confidence 89999965444 3789999999999888887733 2234456656 99999887766
Q ss_pred ---CCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCc-eeee-------eecccceE
Q psy9770 511 ---KDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGF-SPVV-------LGHTDELW 579 (811)
Q Consensus 511 ---~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~-~~~~-------~~h~~~v~ 579 (811)
.+++|.+|..+.+... .+.+.++.... ...+ .+-.....
T Consensus 275 ~~~Lss~V~v~~~d~g~~~------------------------------~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 275 LKDLSSSIWLWFYEDGKWN------------------------------AEKVIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp TTTCCEEEEEEEEETTEEE------------------------------EEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred ccCCCceEEEEEecCCcee------------------------------EEEEEeCCCccccccccccccccccCCCcee
Confidence 5668887766432220 01111111110 0000 01123467
Q ss_pred EEEECCCCCeEEEEEC-CCeEEEEeCCC---CcEEEEecCCC---------------CeEEEEEcCCCCEEEEEE
Q psy9770 580 ALAAHPSLSQFLTAGF-DRIVQLWDSMS---HSVVWSKDIAE---------------QAQSATFSPDGSIIIVGC 635 (811)
Q Consensus 580 ~l~~sp~~~~l~s~s~-dg~v~iwd~~~---~~~~~~~~~~~---------------~v~~~~~spdg~~la~g~ 635 (811)
.|.+++|+++|.++.. .+.|.+||+.. .+.+..+...+ ....++++|||++|+++.
T Consensus 325 ~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 325 DIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 8999999998887765 68999999853 34444444331 368899999999999986
No 241
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.13 E-value=3.9e-05 Score=87.74 Aligned_cols=444 Identities=11% Similarity=0.015 Sum_probs=258.9
Q ss_pred cceEEccCCcEEEEec---cEEEEEeCCCCceEEecc-CCCCeEEEEEcCCCcEEEEeec-cCCCCCCCCCeEEEEeCCC
Q psy9770 264 SNLYLLPTGEIVYFVA---AVAVLYNVEEQTQRHYLG-HTDDIKCLSIHPNKLLIATGQV-AGHDAREGKPHIRIWNSVS 338 (811)
Q Consensus 264 ~~l~~spdg~~l~~~~---~~i~i~d~~~~~~~~~~~-h~~~V~~la~spdg~~Lasg~~-dg~~~~~~~~~I~iWd~~t 338 (811)
..|+|.+.+..||.++ +.|..+++.+.....+.. .......||+.+.+..|..+.. .+ .|.+.++..
T Consensus 40 ~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~--------~I~v~~~dG 111 (628)
T 4a0p_A 40 SALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTN--------RIEVSKLDG 111 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTT--------EEEEEETTS
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCC--------EEEEEecCC
Confidence 4678889888888874 789999998765444332 2346778999987665555443 33 899999876
Q ss_pred CcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEE
Q psy9770 339 LFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVT 418 (811)
Q Consensus 339 ~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~ 418 (811)
......+. ..-.....|++.| ..|.+..+ +.+..+.|...++.... ...+.........+++.++++.++++
T Consensus 112 ~~~~~l~~--~~l~~P~~iavdp-~~G~lY~t-D~g~~~~I~r~~~dG~~----~~~l~~~~~~P~GlalD~~~~~LY~a 183 (628)
T 4a0p_A 112 QHRQVLVW--KDLDSPRALALDP-AEGFMYWT-EWGGKPKIDRAAMDGSE----RTTLVPNVGRANGLTIDYAKRRLYWT 183 (628)
T ss_dssp TTCEEEEC--SSCCCEEEEEEET-TTTEEEEE-ECSSSCEEEEEETTSCS----CEEEECSCSSEEEEEEETTTTEEEEE
T ss_pred CcEEEEEe--CCCCCcccEEEcc-CCCeEEEe-CCCCCCEEEEEeCCCCc----eEEEECCCCCcceEEEccccCEEEEE
Confidence 54333332 2345678999998 24544443 33346788888887654 22223345678899999988888888
Q ss_pred EC-CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcE-EEEcCCCcEEEEecCCceEEEEeec--------
Q psy9770 419 CG-KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEV-LSGDSNGNIIVWTRGSNTISKFIRN-------- 488 (811)
Q Consensus 419 ~~-d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~l-lsg~~dg~I~vwd~~~~~~~~~~~~-------- 488 (811)
-. .+.|...+++ +....... .. . .....+++.. +.+ ++-...+.|...|..+++....+..
T Consensus 184 D~~~~~I~~~d~d-G~~~~v~~---~~-l---~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i 254 (628)
T 4a0p_A 184 DLDTNLIESSNML-GLNREVIA---DD-L---PHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDI 254 (628)
T ss_dssp ETTTTEEEEEETT-SCSCEEEE---EC-C---SCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEE
T ss_pred ECCCCEEEEEcCC-CCceEEee---cc-C---CCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCccee
Confidence 76 5788888887 43222111 11 1 2245777765 454 4666678899988766643333220
Q ss_pred --ccc-------------cceEEEEEecC-CcEEEE----------------------ecCCCcEEEEeCCCCCccceee
Q psy9770 489 --VHE-------------GSVFSICVLKE-GSIISA----------------------GGKDGRLLQFDSNLQPTGYEAQ 530 (811)
Q Consensus 489 --~h~-------------~~V~~l~~s~d-g~~l~s----------------------~s~dg~I~~wd~~~~~~~~~~~ 530 (811)
.|. +....+|+... +.+-.. -+....|+-..+..... ....
T Consensus 255 ~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~-~~~~ 333 (628)
T 4a0p_A 255 LVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQS-PDII 333 (628)
T ss_dssp EEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCC-CCEE
T ss_pred eeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccC-ceEE
Confidence 010 11111222111 211110 11122333333332211 0111
Q ss_pred ec-cccCCeEEEeeCC-CCeEEEEe-CCCeEEEEEccCCce-eeeee------cccceEEEEECCCCCeE-EEEECCCeE
Q psy9770 531 IA-EHLGGIRTVSEGR-GSQLIVGT-TRNCILVGSLNLGFS-PVVLG------HTDELWALAAHPSLSQF-LTAGFDRIV 599 (811)
Q Consensus 531 ~~-~~~~~v~~l~~~~-~~~l~~~~-~~~~i~~~d~~~~~~-~~~~~------h~~~v~~l~~sp~~~~l-~s~s~dg~v 599 (811)
++ .....+..+.+.+ ++.++.+. ..+.|+.++++.... ..+.. ....+.++++...++.| ++-+..+.|
T Consensus 334 l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I 413 (628)
T 4a0p_A 334 LPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVI 413 (628)
T ss_dssp CCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEE
Confidence 11 1223466677665 45666554 456788888776533 22322 23467899999876644 455667899
Q ss_pred EEEeCCCCcEEEE-e-cCCCCeEEEEEcCCCCEEEEEEe-CC--eEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEE
Q psy9770 600 QLWDSMSHSVVWS-K-DIAEQAQSATFSPDGSIIIVGCI-AG--RWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLA 674 (811)
Q Consensus 600 ~iwd~~~~~~~~~-~-~~~~~v~~~~~spdg~~la~g~~-dg--~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~la 674 (811)
.+.++... .... . ..-.....+++.|...+|+.... .. .|...++............-...+.|++.+++..|+
T Consensus 414 ~v~~~~G~-~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LY 492 (628)
T 4a0p_A 414 NVTRLDGR-SVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLF 492 (628)
T ss_dssp EEEETTSC-EEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred EEEECCCC-eEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEE
Confidence 99998644 3322 2 23457899999995445544433 32 677777764433333343445678999999887777
Q ss_pred EEec-CCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCccc
Q psy9770 675 LGSR-DNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQI 739 (811)
Q Consensus 675 sgs~-dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~ 739 (811)
.+.. .+.|..++++...+ +.+. ........+|++.. +....+=.....|...|..+|+..
T Consensus 493 w~D~~~~~I~~~~~dG~~r--~~~~--~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~ 553 (628)
T 4a0p_A 493 WADSDLRRIESSDLSGANR--IVLE--DSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGR 553 (628)
T ss_dssp EEETTTTEEEEEETTSCSC--EEEE--CSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCC
T ss_pred EEeCCCCEEEEEeCCCCce--EEEE--cCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCc
Confidence 7654 47788888865422 1221 12334466777754 445555556678888888877643
No 242
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.06 E-value=5.2e-05 Score=89.70 Aligned_cols=430 Identities=11% Similarity=0.049 Sum_probs=247.0
Q ss_pred cCCcEEEEeccEEEEEeCCCCceEEecc-----CCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEE
Q psy9770 270 PTGEIVYFVAAVAVLYNVEEQTQRHYLG-----HTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSI 344 (811)
Q Consensus 270 pdg~~l~~~~~~i~i~d~~~~~~~~~~~-----h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~ 344 (811)
.+|.+.+...+.|..||..+++...+.. ....|.++....+|.+.+ |...| |..+|..+++...
T Consensus 111 ~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G---------l~~~~~~~~~~~~- 179 (758)
T 3ott_A 111 QGDTLWLGALNGLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG---------LCRYIPSNGKFEG- 179 (758)
T ss_dssp ETTEEEEEETTEEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETTE---------EEEEETTTTEEEE-
T ss_pred cCCcEEEEcCCcceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC---------HhhCccCCCceEE-
Confidence 4566555455678899998776655521 235799999998887665 44445 7788887765433
Q ss_pred eccCCc----cccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEee-eCCCcEEEEEecCCCCCeEEEE
Q psy9770 345 IGIGEF----ERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETK-CSVDTVVAAEFHPLDRNNIVTC 419 (811)
Q Consensus 345 l~~~~h----~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~-~~~~~V~~v~fsp~~~~ll~~~ 419 (811)
+..... ...|.++.... ++..|.. +. ++-|..+|..+++ +..+. .....|.++.... ++.+.+++
T Consensus 180 ~~~~~~~~~~~~~i~~i~~d~--~~~~lWi--gt-~~Gl~~~~~~~~~----~~~~~~l~~~~i~~i~~d~-~g~lWigT 249 (758)
T 3ott_A 180 IPLPVHSSQSNLFVNSLLEDT--TRQCVWI--GT-EGYLFQYFPSTGQ----IKQTEAFHNNSIKSLALDG-NGDLLAGT 249 (758)
T ss_dssp ECCCCCTTCSSCCEEEEEEET--TTTEEEE--EE-EEEEEEEETTTTE----EEEEEEEEEEEEEEEEECT-TCCEEEEE
T ss_pred ecCCCccccccceeEEEEEEC--CCCEEEE--EE-CCCCeEEcCCCCe----EEeccCCCCCeEEEEEEcC-CCCEEEEe
Confidence 221111 23488887776 4543222 12 3457888877654 22221 1234577777766 45555555
Q ss_pred CCCcEEEEEEcCCceeeeeccccc-ccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEee------ccccc
Q psy9770 420 GKSHINFWTIDAGGTLYKKQGIFE-MIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIR------NVHEG 492 (811)
Q Consensus 420 ~d~~i~iwd~~~~~~~~~~~~~~~-~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~------~~h~~ 492 (811)
. +-+.+++..++. +........ ...-....|.++....+|.+-.|+..| +.++... .. ...+. .....
T Consensus 250 ~-~Gl~~~~~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~~-~~-~~~~~~~~~~~~~~~~ 324 (758)
T 3ott_A 250 D-NGLYVYHNDTTP-LQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSRYN-SA-LQFIPISQITGTGDGN 324 (758)
T ss_dssp T-TEEEEECCTTSC-CEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEECCC-C--CEEEEHHHHSCSCCCC
T ss_pred C-CceeEEecCCCc-EEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-ccccccC-Cc-eeEEecccCCCCCCCc
Confidence 4 457777766432 222111000 000122468999999889887887777 5555432 21 11111 01234
Q ss_pred ceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeec-------cccCCeEEEeeCCCCeEEEEeCCCeEEEEEccC
Q psy9770 493 SVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIA-------EHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNL 565 (811)
Q Consensus 493 ~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~ 565 (811)
.|.++....+|.+-+ |+.+| +..++...+.......+. -....|.++....++.+.+|+ ++.+..++..+
T Consensus 325 ~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~~GL~~~~~~~ 401 (758)
T 3ott_A 325 QFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-DGSINRYDYAT 401 (758)
T ss_dssp BEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-TTEEEEEETTT
T ss_pred eEEEEEEcCCCCEEE-eeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-CCcHhhcCcCC
Confidence 688998888888777 55554 666765543210111111 112458888888999999999 56899999877
Q ss_pred Cceeeeee-------cccceEEEEECCCCCeEEEEECCCeEEEEeCCC------CcEE--EEec----C-CCCeEEEEEc
Q psy9770 566 GFSPVVLG-------HTDELWALAAHPSLSQFLTAGFDRIVQLWDSMS------HSVV--WSKD----I-AEQAQSATFS 625 (811)
Q Consensus 566 ~~~~~~~~-------h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~------~~~~--~~~~----~-~~~v~~~~~s 625 (811)
+....+.. ....|.++....++. |..|+..+-|.++|..+ .... ..+. . ...|.++...
T Consensus 402 ~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d 480 (758)
T 3ott_A 402 RQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPD 480 (758)
T ss_dssp TEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEEC
T ss_pred CcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEc
Confidence 64333221 224588888877665 55566666688887542 1111 1111 1 2358999999
Q ss_pred CCCCEEEEEEeCCeEEEEecCCcceeEEecC---CCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecC
Q psy9770 626 PDGSIIIVGCIAGRWLVMDSETREAYSIHTD---GNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTG 702 (811)
Q Consensus 626 pdg~~la~g~~dg~i~i~d~~~~~~~~~~~~---~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~ 702 (811)
++|.+.+.++..+-|..||..+++....... ....+.++....+|.+.+. +..| +..|+..++.. .... ..+
T Consensus 481 ~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l~~~~~~~~~~--~~~~-~~g 555 (758)
T 3ott_A 481 NEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHGG-VMRINPKDESQ--QSIS-FGS 555 (758)
T ss_dssp TTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETTE-EEEECC--CCC--CBCC-CCC
T ss_pred CCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecCc-eEEEecCCCce--EEec-ccC
Confidence 9998766333345588899887665443221 1245788888888876654 4544 88888665421 1110 111
Q ss_pred -CCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCc
Q psy9770 703 -HSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCR 737 (811)
Q Consensus 703 -h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~ 737 (811)
....|.++... +|.+.++. ..| |..+|..+.+
T Consensus 556 l~~~~i~~i~~~-~g~lWi~t-~~G-l~~~~~~~~~ 588 (758)
T 3ott_A 556 FSNNEILSMTCV-KNSIWVST-TNG-LWIIDRKTMD 588 (758)
T ss_dssp ---CCEEEEEEE-TTEEEEEE-SSC-EEEEETTTCC
T ss_pred CCccceEEEEEC-CCCEEEEC-CCC-eEEEcCCCce
Confidence 13457788764 66555544 454 7788887654
No 243
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.02 E-value=5.9e-08 Score=112.62 Aligned_cols=276 Identities=14% Similarity=0.147 Sum_probs=177.1
Q ss_pred CCcEEEEcCCCcEEEEecCCceEEEEeeccccc---------ce-EEEEEecCCcEEEEecCCCcEEEEeCCCCCcccee
Q psy9770 460 GGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEG---------SV-FSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEA 529 (811)
Q Consensus 460 ~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~---------~V-~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~ 529 (811)
++.+++++.++.|+.+|..+|+.+..+...... .+ ..+++ .+..|+.++.|+.|..+|..+++.....
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 566778888999999999999988777521110 01 11223 2345666888999999999988875554
Q ss_pred eecccc--CCeEEEeeCCCCeEEEEeC------CCeEEEEEccCCceee-eee---------------------------
Q psy9770 530 QIAEHL--GGIRTVSEGRGSQLIVGTT------RNCILVGSLNLGFSPV-VLG--------------------------- 573 (811)
Q Consensus 530 ~~~~~~--~~v~~l~~~~~~~l~~~~~------~~~i~~~d~~~~~~~~-~~~--------------------------- 573 (811)
...... ..+.....-.++.++++.. ++.|+.+|..++...- +..
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 443211 0111100112567777654 4789999988764321 110
Q ss_pred ----cccceEEEEECCCCCeEEEEECCC-------------------eEEEEeCCCCcEEEEecCC----------CCeE
Q psy9770 574 ----HTDELWALAAHPSLSQFLTAGFDR-------------------IVQLWDSMSHSVVWSKDIA----------EQAQ 620 (811)
Q Consensus 574 ----h~~~v~~l~~sp~~~~l~s~s~dg-------------------~v~iwd~~~~~~~~~~~~~----------~~v~ 620 (811)
+......+++.|+..+++.+..++ .|..+|..+++.++.+... .+..
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~ 303 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQIT 303 (668)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred eeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcE
Confidence 001112467888888888887766 3999999999999986532 2333
Q ss_pred EEEEcCCCC---EEEEEEeCCeEEEEecCCcceeEEecCCC------------CC------------------------e
Q psy9770 621 SATFSPDGS---IIIVGCIAGRWLVMDSETREAYSIHTDGN------------EP------------------------I 661 (811)
Q Consensus 621 ~~~~spdg~---~la~g~~dg~i~i~d~~~~~~~~~~~~~~------------~~------------------------i 661 (811)
...+..+|+ .+++++.+|.++++|..+|+++....... .+ -
T Consensus 304 ~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w 383 (668)
T 1kv9_A 304 LAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNW 383 (668)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCS
T ss_pred EEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCC
Confidence 334445775 68889999999999999999874332111 00 1
Q ss_pred EEEEEccCCCEEEEEe------------------------------------cCCcEEEEEecCCCcceeEEEEecCCCC
Q psy9770 662 QVVKFSPDGKLLALGS------------------------------------RDNYIYVYEVSGDSRKYSRVGRCTGHSS 705 (811)
Q Consensus 662 ~~i~~spdg~~lasgs------------------------------------~dg~I~iwd~~~~~~~~~~~~~~~~h~~ 705 (811)
..++|+|+..++++.. .+|.|+.||+.+++..++.. .+ .
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~----~~-~ 458 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVP----YP-T 458 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEE----ES-S
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEcc----CC-C
Confidence 1267888877665421 23779999999885544432 11 2
Q ss_pred CeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCC
Q psy9770 706 FITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQS 742 (811)
Q Consensus 706 ~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~ 742 (811)
.+....+...+.++++++.||.|+.||.++|+.+..+
T Consensus 459 ~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 459 HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEe
Confidence 2222334446788999999999999999999877543
No 244
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.02 E-value=2.7e-11 Score=130.42 Aligned_cols=185 Identities=10% Similarity=0.076 Sum_probs=107.4
Q ss_pred CCCeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCC-eE-E
Q psy9770 586 SLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEP-IQ-V 663 (811)
Q Consensus 586 ~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~-i~-~ 663 (811)
++..+++++.|+.|+.||..+++.++.+.. ..+.+..+..++..+++++.||.|+.||..+++.+..+..+... +. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 477899999999999999999999999776 66666666678888888889999999999999877665433111 10 1
Q ss_pred EEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCC
Q psy9770 664 VKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSS 743 (811)
Q Consensus 664 i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~ 743 (811)
..+. ++..|++++.++.|+.||..+++..+. +..+. ...++|++..|++++.|+.|+.||..+|+.+-...
T Consensus 87 p~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~----~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 87 PCRS-SDGILYMGKKQDIWYVIDLLTGEKQQT----LSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp SCC------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred ceEe-cCCEEEEEeCCCEEEEEECCCCcEEEE----ecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 1111 344677788899999999998854433 33222 23566788899999999999999999998653321
Q ss_pred CccceeEeccceeeccceeeeCCCCCCCCccceEEecCCC---CEEEEEcCCCcEEEEeCCCCCCCC
Q psy9770 744 QLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDA---RVIATGDDFGKLKLYSYPAVQPKL 807 (811)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg---~~Las~~~dg~v~vw~~~~~~~~~ 807 (811)
. . .....+++.+. ..+++++.||.|+.||..+|+.+-
T Consensus 158 ~------~---------------------~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W 197 (369)
T 2hz6_A 158 Y------F---------------------DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLW 197 (369)
T ss_dssp E------E---------------------EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEE
T ss_pred c------c---------------------cccCccccCCccccceEEEECCCCEEEEEECCCCcEEE
Confidence 0 0 01112222221 345567788999999998887543
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.00 E-value=1e-07 Score=110.61 Aligned_cols=296 Identities=13% Similarity=0.143 Sum_probs=185.0
Q ss_pred CCCceEEEEEcccCCCcceEEEeeeCCCc----------E-EEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccc
Q psy9770 374 GNDYNISVWDWQKSDRGHKITETKCSVDT----------V-VAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIF 442 (811)
Q Consensus 374 s~d~~i~vWd~~~~~~~~~~~~~~~~~~~----------V-~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~ 442 (811)
+.++.|.-+|.++++ .+.++...... + ..+++ .++.+++.+.++.|..+|..+|+.+.+....-
T Consensus 73 ~~~~~v~AlD~~tG~---~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~ 147 (668)
T 1kv9_A 73 MSWSRVIAVDAASGK---ELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTD 147 (668)
T ss_dssp EGGGEEEEEETTTCC---EEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEECSC
T ss_pred CCCCeEEEEECCCCh---hceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeeccCC
Confidence 457788888888888 66665432210 0 11222 25677788889999999999999887764321
Q ss_pred cccCCCCceEEEEEEcCCCcEEEEcC------CCcEEEEecCCceEEEEeecc--cc-----------------------
Q psy9770 443 EMIRDKPKYVTCLAFTQGGEVLSGDS------NGNIIVWTRGSNTISKFIRNV--HE----------------------- 491 (811)
Q Consensus 443 ~~l~~~~~~v~~l~~s~~g~llsg~~------dg~I~vwd~~~~~~~~~~~~~--h~----------------------- 491 (811)
.. . ...+.+.-...++.++++.. +|.|+.+|..+|+.+..+... ..
T Consensus 148 ~~-~--~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~ 224 (668)
T 1kv9_A 148 PA-K--PYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWK 224 (668)
T ss_dssp TT-S--SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHH
T ss_pred CC-C--cceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceee
Confidence 10 0 00011000012566665543 589999999999988776511 00
Q ss_pred -----cceEEEEEecCCcEEEEecCCCc-------------------EEEEeCCCCCccceeeecccc-------CCeEE
Q psy9770 492 -----GSVFSICVLKEGSIISAGGKDGR-------------------LLQFDSNLQPTGYEAQIAEHL-------GGIRT 540 (811)
Q Consensus 492 -----~~V~~l~~s~dg~~l~s~s~dg~-------------------I~~wd~~~~~~~~~~~~~~~~-------~~v~~ 540 (811)
.....+++.++..+++.+..++. |..+|.++++.........+. .+...
T Consensus 225 ~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~ 304 (668)
T 1kv9_A 225 LGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITL 304 (668)
T ss_dssp HCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEE
T ss_pred eCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEE
Confidence 01124678888788887877663 999999998875555543332 12221
Q ss_pred EeeCCCC----eEEEEeCCCeEEEEEccCCceee-eeec-----------c-cce------------------------E
Q psy9770 541 VSEGRGS----QLIVGTTRNCILVGSLNLGFSPV-VLGH-----------T-DEL------------------------W 579 (811)
Q Consensus 541 l~~~~~~----~l~~~~~~~~i~~~d~~~~~~~~-~~~h-----------~-~~v------------------------~ 579 (811)
.....++ .+++++.+|.++++|..++.... .... . .++ .
T Consensus 305 ~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~ 384 (668)
T 1kv9_A 305 AELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWH 384 (668)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSS
T ss_pred EEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCC
Confidence 2222234 37778889999999988764321 0000 0 000 1
Q ss_pred EEEECCCCCeEEEEE------------------------------------CCCeEEEEeCCCCcEEEEecCCCCeEEEE
Q psy9770 580 ALAAHPSLSQFLTAG------------------------------------FDRIVQLWDSMSHSVVWSKDIAEQAQSAT 623 (811)
Q Consensus 580 ~l~~sp~~~~l~s~s------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~v~~~~ 623 (811)
.++++|+..+++... .+|.|..||+.+++.++............
T Consensus 385 ~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~ 464 (668)
T 1kv9_A 385 SMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGT 464 (668)
T ss_dssp CCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCE
T ss_pred cceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCce
Confidence 256777766555421 24789999999999999977665555555
Q ss_pred EcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCe-EEEEEccCCC-EEEEEe
Q psy9770 624 FSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPI-QVVKFSPDGK-LLALGS 677 (811)
Q Consensus 624 ~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~i~~spdg~-~lasgs 677 (811)
+...+.++++++.+|.+++||..+++.+..+....... .-+.+..+|+ +++.++
T Consensus 465 ~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 465 LSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 66678899999999999999999999998886543211 2345566776 455443
No 246
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.99 E-value=2.2e-10 Score=123.31 Aligned_cols=256 Identities=11% Similarity=0.089 Sum_probs=145.5
Q ss_pred CCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeE
Q psy9770 460 GGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIR 539 (811)
Q Consensus 460 ~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~ 539 (811)
++.+++++.||.|+.||..+|+.+..+. . +.+.+..+..++.++++++.||.|+.||..+++.......... ..+.
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~-~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~-~~~~ 84 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLK-E--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP-ELVQ 84 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEE-C--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-HHHT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEec-C--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-cccc
Confidence 4557799999999999999999998877 3 5566666667787888788999999999977765222222110 0010
Q ss_pred -EEeeCCCCeEEEEeCCCeEEEEEccCCcee-eeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCCC
Q psy9770 540 -TVSEGRGSQLIVGTTRNCILVGSLNLGFSP-VVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAE 617 (811)
Q Consensus 540 -~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~-~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~ 617 (811)
......++.+++++.++.++.||..++... .+..+. ...++|++..+++++.|+.|+.||..+++.++.+....
T Consensus 85 ~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 85 ASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp TCSCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred cCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence 111224567888888999999999877433 222222 23456788899999999999999999999877754221
Q ss_pred CeEEEEEcCCC---CEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEE----EEEecCCcEEEEEecCC
Q psy9770 618 QAQSATFSPDG---SIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLL----ALGSRDNYIYVYEVSGD 690 (811)
Q Consensus 618 ~v~~~~~spdg---~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~l----asgs~dg~I~iwd~~~~ 690 (811)
....++..+. ..+++++.+|.++.||..+++.+..+......+....++++|... +.+ ++.++.+|..++
T Consensus 161 -~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~~~~~--~~~l~~ld~~tG 237 (369)
T 2hz6_A 161 -YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHINVA--VETLRYLTFMSG 237 (369)
T ss_dssp -ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECCEEEE--HHHHHHHHHHHH
T ss_pred -ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEeccceeec--ccceeeeehhcC
Confidence 1223333332 567778899999999999999887776433323344556666432 222 345666776555
Q ss_pred C----cceeEEEEecCCCCCeeEEEeCC--CCCeEEEecCCceEEEEECCC
Q psy9770 691 S----RKYSRVGRCTGHSSFITHLDWSE--DSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 691 ~----~~~~~~~~~~~h~~~V~~l~~sp--dg~~L~s~s~Dg~i~iWd~~~ 735 (811)
+ ..++. . ....+. +| .+..|+.++.||.|+.++...
T Consensus 238 ~~~~~~~W~~----~-~~~~~~----sp~~~~g~lyv~~~~G~l~al~~~~ 279 (369)
T 2hz6_A 238 EVGRITKWKY----P-FPKETE----AKSKLTPTLYVGKYSTSLYASPSMV 279 (369)
T ss_dssp HHHHHHTSCC----C-CCCHHH----HHHHSEEEECBEECSSCEECCEEEE
T ss_pred Ccccceeeee----c-cCcccc----ccccccceEEEecccCCEEecCccc
Confidence 3 22221 1 011111 22 345677788899999888763
No 247
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.99 E-value=8.8e-08 Score=102.07 Aligned_cols=249 Identities=11% Similarity=0.126 Sum_probs=159.1
Q ss_pred EEeeecCCCCccceEEc--cCCcEEEEec---cEEEEEeCCCC----ce-EEec------cCC-CCeEEEEEcCCCcEEE
Q psy9770 253 WVYGYRGKDCRSNLYLL--PTGEIVYFVA---AVAVLYNVEEQ----TQ-RHYL------GHT-DDIKCLSIHPNKLLIA 315 (811)
Q Consensus 253 ~v~g~~~~~~~~~l~~s--pdg~~l~~~~---~~i~i~d~~~~----~~-~~~~------~h~-~~V~~la~spdg~~La 315 (811)
+.+||+.....-...++ +++++|+..+ +.|.++|+.+. +. +.+. ... ..-..+..+||| +++
T Consensus 74 HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~V 152 (462)
T 2ece_A 74 HHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYI 152 (462)
T ss_dssp CCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEE
T ss_pred cccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEE
Confidence 45677654333344567 8899998876 79999999754 22 2221 111 244567888999 555
Q ss_pred EeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccc-cEEEEEEecCCCCcEEEEEeC-----------------CCCc
Q psy9770 316 TGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFER-SISCLSFSKADGGTFLCAVDE-----------------GNDY 377 (811)
Q Consensus 316 sg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~-~V~~l~fs~~~dg~~Lasv~~-----------------s~d~ 377 (811)
++..+. ++ .....|.+.|..+++.+.++..+.... --..+-|+| +++.+++..- ....
T Consensus 153 s~~g~~-~g-~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p--~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d 228 (462)
T 2ece_A 153 SALGNE-EG-EGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNL--PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGN 228 (462)
T ss_dssp EEEEET-TS-CSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEET--TTTEEEECBCCCHHHHTTCCCTTTHHHHSCC
T ss_pred EcCCCc-CC-CCCCeEEEEECCCCeEEEEEccCCCCccccceEEECC--CCCEEEEccCcCccccccccchhhhhhccCC
Confidence 554441 11 223489999999999999987443332 223577899 8888887210 1378
Q ss_pred eEEEEEcccCCCcceEEEeeeCC--CcEEEEEe--cCCCCCeEEEEC-----C-CcEEEEEEcCCceeeeeccc-ccc--
Q psy9770 378 NISVWDWQKSDRGHKITETKCSV--DTVVAAEF--HPLDRNNIVTCG-----K-SHINFWTIDAGGTLYKKQGI-FEM-- 444 (811)
Q Consensus 378 ~i~vWd~~~~~~~~~~~~~~~~~--~~V~~v~f--sp~~~~ll~~~~-----d-~~i~iwd~~~~~~~~~~~~~-~~~-- 444 (811)
+|.+||+.+++ .+.++.... .....+.| +|+++..++++. . ++|.+|..+. +.....+.+ +..
T Consensus 229 ~V~v~D~~~~k---~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~ 304 (462)
T 2ece_A 229 RIHFWDLRKRK---RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEP 304 (462)
T ss_dssp EEEEEETTTTE---EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEE
T ss_pred EEEEEECCCCc---EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCcc
Confidence 99999999877 777776532 23445555 999999999886 4 6888888774 322222110 000
Q ss_pred ----cC-------CCCceEEEEEEcCCCcEE--EEcCCCcEEEEecCC---ceEEEEeecc-------c------ccceE
Q psy9770 445 ----IR-------DKPKYVTCLAFTQGGEVL--SGDSNGNIIVWTRGS---NTISKFIRNV-------H------EGSVF 495 (811)
Q Consensus 445 ----l~-------~~~~~v~~l~~s~~g~ll--sg~~dg~I~vwd~~~---~~~~~~~~~~-------h------~~~V~ 495 (811)
+. +.......+.+++||+++ +.-..+.|.+||+.. .+.+..+..+ | .+.-.
T Consensus 305 v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr 384 (462)
T 2ece_A 305 LEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQ 384 (462)
T ss_dssp CCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCC
T ss_pred ccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCC
Confidence 00 002346789999999944 555678999999853 3455555422 1 01357
Q ss_pred EEEEecCCcEEEEec
Q psy9770 496 SICVLKEGSIISAGG 510 (811)
Q Consensus 496 ~l~~s~dg~~l~s~s 510 (811)
.+++++||++|+++.
T Consensus 385 ~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 385 MLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSSEEEEEC
T ss_pred EEEEcCCCCEEEEEc
Confidence 899999999998776
No 248
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.98 E-value=4.2e-05 Score=90.45 Aligned_cols=431 Identities=11% Similarity=0.052 Sum_probs=245.9
Q ss_pred cceEEccCCcEEEEeccEEEEEeCCCCceEEeccC------CCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCC
Q psy9770 264 SNLYLLPTGEIVYFVAAVAVLYNVEEQTQRHYLGH------TDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSV 337 (811)
Q Consensus 264 ~~l~~spdg~~l~~~~~~i~i~d~~~~~~~~~~~h------~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~ 337 (811)
..+....+|.+.+...+-|..|+..++....+... ...|.++...+++..|-.|...| +..+|..
T Consensus 149 ~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~G---------l~~~~~~ 219 (758)
T 3ott_A 149 YSIIRTKDNQIYVGTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGY---------LFQYFPS 219 (758)
T ss_dssp EEEEECTTCCEEEEETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEE---------EEEEETT
T ss_pred EEEEEcCCCCEEEEeCCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECCC---------CeEEcCC
Confidence 34555667776665556688899887765443211 23489998888776444444445 8889988
Q ss_pred CCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeee--------CCCcEEEEEec
Q psy9770 338 SLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKC--------SVDTVVAAEFH 409 (811)
Q Consensus 338 t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~--------~~~~V~~v~fs 409 (811)
+++...... .....|.++.... +|.+.+. .. +-|.+++..++. +..+.. ....|.++...
T Consensus 220 ~~~~~~~~~--l~~~~i~~i~~d~--~g~lWig---T~-~Gl~~~~~~~~~----~~~~~~~~~~~~~l~~~~i~~i~~D 287 (758)
T 3ott_A 220 TGQIKQTEA--FHNNSIKSLALDG--NGDLLAG---TD-NGLYVYHNDTTP----LQHIIHDSRNIQSLTNNIIWNIFAD 287 (758)
T ss_dssp TTEEEEEEE--EEEEEEEEEEECT--TCCEEEE---ET-TEEEEECCTTSC----CEEECCCTTCTTSCSCSCEEEEEEC
T ss_pred CCeEEeccC--CCCCeEEEEEEcC--CCCEEEE---eC-CceeEEecCCCc----EEEEEcCCCCcCcCCcCeEEEEEEc
Confidence 765433222 1245688887766 7777765 33 347788876654 222221 23458888777
Q ss_pred CCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceE--EEEee
Q psy9770 410 PLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTI--SKFIR 487 (811)
Q Consensus 410 p~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~--~~~~~ 487 (811)
.+ +.+-+++..| +.++................ ......|.++.-..+|.+..|+.+| +..++..++.. ...+.
T Consensus 288 ~~-g~lWiGT~~G-l~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~~~~~~~~ 362 (758)
T 3ott_A 288 QE-HNIWLGTDYG-ISLSRYNSALQFIPISQITG--TGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDPAGERHDAIWYR 362 (758)
T ss_dssp TT-CCEEEEESSS-EEEECCCC-CEEEEHHHHSC--SCCCCBEEEEEECTTCCEEEEETTE-EEEESCTTSSCCCCEEEC
T ss_pred CC-CCEEEEeCCc-ccccccCCceeEEecccCCC--CCCCceEEEEEEcCCCCEEEeeCCc-ceeecccccccceeEEec
Confidence 64 4555555555 54433221111111000000 1123468999988999988777655 66777654321 11121
Q ss_pred c------ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeecc-----ccCCeEEEeeCCCCeEEEEeCCC
Q psy9770 488 N------VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAE-----HLGGIRTVSEGRGSQLIVGTTRN 556 (811)
Q Consensus 488 ~------~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~-----~~~~v~~l~~~~~~~l~~~~~~~ 556 (811)
. .....|.++.-..+|++-+ |+ ++-|..||..++.. ....... ....|.++....++.+.+|+..+
T Consensus 363 ~~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~ 439 (758)
T 3ott_A 363 MGDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQF-IHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLG 439 (758)
T ss_dssp TTCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEE-EEEEEECCC--CBSSSEEEEEECTTSEEEEEESSS
T ss_pred cCCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcE-EEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCC
Confidence 0 1124588998888887766 55 45789999877655 2111111 22457888888899999999888
Q ss_pred eEEEEEccCC-------ce--eeee---e-cccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEec--C--CCCe
Q psy9770 557 CILVGSLNLG-------FS--PVVL---G-HTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKD--I--AEQA 619 (811)
Q Consensus 557 ~i~~~d~~~~-------~~--~~~~---~-h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~--~~~v 619 (811)
.+.+++.... .. ..+. + ....|.++...+++.+.+.++..+-|..+|..+++...... . ...+
T Consensus 440 Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~ 519 (758)
T 3ott_A 440 GIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSP 519 (758)
T ss_dssp CEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCE
T ss_pred ceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCccc
Confidence 8998886531 10 0111 1 12358899999888877644444568888988776554321 1 2357
Q ss_pred EEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEE-ec-CCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEE
Q psy9770 620 QSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI-HT-DGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRV 697 (811)
Q Consensus 620 ~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~-~~-~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~ 697 (811)
.++....+|.+.+ |+. +-+..||..+++.... .. -....|.++... +|+ |..++..| |..|+..+.. +.
T Consensus 520 ~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~-~g~-lWi~t~~G-l~~~~~~~~~--~~-- 590 (758)
T 3ott_A 520 NYLLCDEDGLLWV-GFH-GGVMRINPKDESQQSISFGSFSNNEILSMTCV-KNS-IWVSTTNG-LWIIDRKTMD--AR-- 590 (758)
T ss_dssp EEEEECTTSCEEE-EET-TEEEEECC--CCCCBCCCCC---CCEEEEEEE-TTE-EEEEESSC-EEEEETTTCC--EE--
T ss_pred ceEEECCCCCEEE-Eec-CceEEEecCCCceEEecccCCCccceEEEEEC-CCC-EEEECCCC-eEEEcCCCce--eE--
Confidence 8888888887664 454 4588888776543221 11 123457777764 665 44555555 7788877642 11
Q ss_pred EEecCCCCCeeEEEeC-CCCCeEEEecCCceEEEEECCC
Q psy9770 698 GRCTGHSSFITHLDWS-EDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 698 ~~~~~h~~~V~~l~~s-pdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
.+.-....+....+. ++| .|..|+.+| +..++.+.
T Consensus 591 -~~~~~~~~~~~~~~~~~~G-~l~fG~~~G-l~~f~p~~ 626 (758)
T 3ott_A 591 -QQNMTNKRFTSLLFDPKED-CVYLGGADG-FGISHSNL 626 (758)
T ss_dssp -EC--CCCCCSEEEEETTTT-EEEEECBSE-EEEEEC--
T ss_pred -EecCCCCceeeeEEECCCC-cEEEecCCc-eEEEChhh
Confidence 111112233344443 455 455566776 45556643
No 249
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.97 E-value=5e-08 Score=110.82 Aligned_cols=275 Identities=12% Similarity=0.088 Sum_probs=172.5
Q ss_pred CCcEEEEcC-CCcEEEEec-CCceEEEEeecccccce----------EEEEEecCCcEEEEecCCCcEEEEeCCCCCccc
Q psy9770 460 GGEVLSGDS-NGNIIVWTR-GSNTISKFIRNVHEGSV----------FSICVLKEGSIISAGGKDGRLLQFDSNLQPTGY 527 (811)
Q Consensus 460 ~g~llsg~~-dg~I~vwd~-~~~~~~~~~~~~h~~~V----------~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~ 527 (811)
++.+++++. ++.|+.+|. .+|+.+..+.......+ ..+++ .+..|+.++.|+.|..+|..+++...
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 566777777 899999999 89998877652211100 11233 24456668889999999999888755
Q ss_pred eeeeccccC--CeEEEeeCCCCeEEEEeC------CCeEEEEEccCCceeeeeecccc----------------------
Q psy9770 528 EAQIAEHLG--GIRTVSEGRGSQLIVGTT------RNCILVGSLNLGFSPVVLGHTDE---------------------- 577 (811)
Q Consensus 528 ~~~~~~~~~--~v~~l~~~~~~~l~~~~~------~~~i~~~d~~~~~~~~~~~h~~~---------------------- 577 (811)
...+..+.. .+.+-..-.++.+++++. ++.|+.+|..++...-.......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~ 219 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGL 219 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSH
T ss_pred EecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccccc
Confidence 555443211 111100112577888776 68999999887643211110000
Q ss_pred ----------------e-EEEEECCCCCeEEEEECC----------------CeEEEEeCCCCcEEEEecCC--------
Q psy9770 578 ----------------L-WALAAHPSLSQFLTAGFD----------------RIVQLWDSMSHSVVWSKDIA-------- 616 (811)
Q Consensus 578 ----------------v-~~l~~sp~~~~l~s~s~d----------------g~v~iwd~~~~~~~~~~~~~-------- 616 (811)
+ ..+++.++...++.+..+ +.|..+|..+++.++.+...
T Consensus 220 g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~ 299 (571)
T 2ad6_A 220 GTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFA 299 (571)
T ss_dssp HHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCC
T ss_pred ccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccc
Confidence 0 135566666666666532 36999999999999986532
Q ss_pred --CCeEEEEEcCCCC---EEEEEEeCCeEEEEecCCcceeEEecCCC-------------CCe-----------------
Q psy9770 617 --EQAQSATFSPDGS---IIIVGCIAGRWLVMDSETREAYSIHTDGN-------------EPI----------------- 661 (811)
Q Consensus 617 --~~v~~~~~spdg~---~la~g~~dg~i~i~d~~~~~~~~~~~~~~-------------~~i----------------- 661 (811)
....-+....+|+ .+++++.+|.++++|..+++.+..+.... .++
T Consensus 300 ~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~ 379 (571)
T 2ad6_A 300 GVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNIC 379 (571)
T ss_dssp CCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEES
T ss_pred cCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEEC
Confidence 1112233335774 67788889999999999999876654221 111
Q ss_pred ---------EEEEEccCCCEEEEEec-------------------------------------CCcEEEEEecCCCccee
Q psy9770 662 ---------QVVKFSPDGKLLALGSR-------------------------------------DNYIYVYEVSGDSRKYS 695 (811)
Q Consensus 662 ---------~~i~~spdg~~lasgs~-------------------------------------dg~I~iwd~~~~~~~~~ 695 (811)
..++|+|+..+|++... +|.|+.||..+++..++
T Consensus 380 P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~ 459 (571)
T 2ad6_A 380 PSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWT 459 (571)
T ss_dssp SCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEE
T ss_pred CCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEE
Confidence 24678888877776542 46788899888755444
Q ss_pred EEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCC
Q psy9770 696 RVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQ 741 (811)
Q Consensus 696 ~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~ 741 (811)
.-. ...+....+...+..++.++.||.|+.||.++|+.+-.
T Consensus 460 ~~~-----~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~ 500 (571)
T 2ad6_A 460 KWE-----KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWN 500 (571)
T ss_dssp EEE-----SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ecC-----CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEE
Confidence 321 11122222223466778899999999999999987654
No 250
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.97 E-value=5.9e-08 Score=107.10 Aligned_cols=273 Identities=11% Similarity=0.042 Sum_probs=179.9
Q ss_pred EEEEcCCCcEEEEecCCceEEEEee---------------------c-----------cc------ccceEEEEEec---
Q psy9770 463 VLSGDSNGNIIVWTRGSNTISKFIR---------------------N-----------VH------EGSVFSICVLK--- 501 (811)
Q Consensus 463 llsg~~dg~I~vwd~~~~~~~~~~~---------------------~-----------~h------~~~V~~l~~s~--- 501 (811)
+.+|+..|.++|+-+.+++.+..+. . .+ .+.......+.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 3488899999999998888777664 0 00 12222344554
Q ss_pred --CCcEEEEecC-CCcEEEEeCCCCCccceeeeccccCCeEEEee---CCCCeEEEEe------------------CCCe
Q psy9770 502 --EGSIISAGGK-DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSE---GRGSQLIVGT------------------TRNC 557 (811)
Q Consensus 502 --dg~~l~s~s~-dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~---~~~~~l~~~~------------------~~~~ 557 (811)
||++++.... ++.|.+.|+.+.++.....++... ....+++ ...+++++++ .++.
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~-~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAK-GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCC-SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCC-CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 7887776555 457999999988764444444332 3566665 3456666663 2346
Q ss_pred EEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCC--------------------------------------eE
Q psy9770 558 ILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDR--------------------------------------IV 599 (811)
Q Consensus 558 i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg--------------------------------------~v 599 (811)
+.++|.++........-.+....++++|+|+++++.+.+. .|
T Consensus 177 vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 7888887653222111112456788999999988888553 37
Q ss_pred EEEeCCC--CcE-EEEecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecCCcc------------eeEEecCCCCCeEE
Q psy9770 600 QLWDSMS--HSV-VWSKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSETRE------------AYSIHTDGNEPIQV 663 (811)
Q Consensus 600 ~iwd~~~--~~~-~~~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~~~~------------~~~~~~~~~~~i~~ 663 (811)
.+.|..+ ++. +..+.......++.++|||++++++. .+..|.++|+.+.+ ....... ......
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h 335 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLH 335 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEE
T ss_pred EEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcce
Confidence 7778777 444 55565666788999999999888766 46799999999663 3344433 345678
Q ss_pred EEEccCCCEEEEEecCCcEEEEEecCC------CcceeEEEEecCCCCCe-----eEEEeCCCCCeEEEecC---Cce--
Q psy9770 664 VKFSPDGKLLALGSRDNYIYVYEVSGD------SRKYSRVGRCTGHSSFI-----THLDWSEDSMYIRSNSG---DYE-- 727 (811)
Q Consensus 664 i~~spdg~~lasgs~dg~I~iwd~~~~------~~~~~~~~~~~~h~~~V-----~~l~~spdg~~L~s~s~---Dg~-- 727 (811)
++|+|||....+.--|+.|.+||+... +...+.+.++..|-.+- .++.++|||++|+++.. |.-
T Consensus 336 ~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~ 415 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLN 415 (595)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCC
T ss_pred EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccccc
Confidence 999999944445567899999999862 22235666666554432 22356899999998753 432
Q ss_pred --------EEEEECCCCc
Q psy9770 728 --------LLYWNAGTCR 737 (811)
Q Consensus 728 --------i~iWd~~~~~ 737 (811)
-.++|+.+++
T Consensus 416 ~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 416 VGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCSSCCEEEEEEECSSSS
T ss_pred CCCCCCCcceEEEcCCCc
Confidence 2789996554
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.95 E-value=8.4e-07 Score=100.64 Aligned_cols=277 Identities=12% Similarity=0.072 Sum_probs=171.9
Q ss_pred CCcEEEEcC-CCcEEEEec-CCceEEEEeeccccc----------ceEEEEEecCCcE----EEEecCCCcEEEEeCCCC
Q psy9770 460 GGEVLSGDS-NGNIIVWTR-GSNTISKFIRNVHEG----------SVFSICVLKEGSI----ISAGGKDGRLLQFDSNLQ 523 (811)
Q Consensus 460 ~g~llsg~~-dg~I~vwd~-~~~~~~~~~~~~h~~----------~V~~l~~s~dg~~----l~s~s~dg~I~~wd~~~~ 523 (811)
++.+++++. ++.|+.+|. .+|+.+..+...... ....+++.|.+.. |+.++.|+.|..+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 566777777 899999999 899988776522111 0123455433333 666888999999999988
Q ss_pred CccceeeeccccC--CeEEEeeCCCCeEEEEeC------CCeEEEEEccCCceeeeeeccc-------------------
Q psy9770 524 PTGYEAQIAEHLG--GIRTVSEGRGSQLIVGTT------RNCILVGSLNLGFSPVVLGHTD------------------- 576 (811)
Q Consensus 524 ~~~~~~~~~~~~~--~v~~l~~~~~~~l~~~~~------~~~i~~~d~~~~~~~~~~~h~~------------------- 576 (811)
+......+..+.. .+.+--.-.++.+++++. ++.|+.+|..++...-......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g 221 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYG 221 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred CEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccc
Confidence 8755544433211 111100112567777664 7899999988764321111000
Q ss_pred -------------------ceE-EEEECCCCCeEEEEECC----------------CeEEEEeCCCCcEEEEecCCC---
Q psy9770 577 -------------------ELW-ALAAHPSLSQFLTAGFD----------------RIVQLWDSMSHSVVWSKDIAE--- 617 (811)
Q Consensus 577 -------------------~v~-~l~~sp~~~~l~s~s~d----------------g~v~iwd~~~~~~~~~~~~~~--- 617 (811)
.++ .+++.+...+++.+..+ +.|..+|..+++.++.++...
T Consensus 222 ~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~ 301 (599)
T 1w6s_A 222 QKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDE 301 (599)
T ss_dssp CTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCS
T ss_pred ccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCcc
Confidence 011 34566677777777655 389999999999999865421
Q ss_pred -------CeEEEEEc-CCC---CEEEEEEeCCeEEEEecCCcceeEEecCCC-------------CCe------------
Q psy9770 618 -------QAQSATFS-PDG---SIIIVGCIAGRWLVMDSETREAYSIHTDGN-------------EPI------------ 661 (811)
Q Consensus 618 -------~v~~~~~s-pdg---~~la~g~~dg~i~i~d~~~~~~~~~~~~~~-------------~~i------------ 661 (811)
...-+... .+| +.++.++.+|.++++|..+|+.+....... .++
T Consensus 302 wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~ 381 (599)
T 1w6s_A 302 WDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHL 381 (599)
T ss_dssp SCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCC
T ss_pred ccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCC
Confidence 11222332 577 567778899999999999999876554211 111
Q ss_pred --------------EEEEEccCCCEEEEEe---------------------------------------cCCcEEEEEec
Q psy9770 662 --------------QVVKFSPDGKLLALGS---------------------------------------RDNYIYVYEVS 688 (811)
Q Consensus 662 --------------~~i~~spdg~~lasgs---------------------------------------~dg~I~iwd~~ 688 (811)
..++|+|+..++++.. .+|.|..||+.
T Consensus 382 ~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~ 461 (599)
T 1w6s_A 382 AKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAI 461 (599)
T ss_dssp EEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTT
T ss_pred ccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECC
Confidence 2467787776665532 23678888888
Q ss_pred CCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCC
Q psy9770 689 GDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQ 741 (811)
Q Consensus 689 ~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~ 741 (811)
+++..++..... ++..-.+...+.+++.++.||.|+.||.++|+.+-.
T Consensus 462 tG~~~W~~~~~~-----~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~ 509 (599)
T 1w6s_A 462 TGDYKWEKMERF-----AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK 509 (599)
T ss_dssp TCCEEEEEEESS-----CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCCEEeEecCCC-----CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE
Confidence 876555432111 111101122567888899999999999999997653
No 252
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.92 E-value=5.5e-08 Score=97.58 Aligned_cols=208 Identities=11% Similarity=-0.009 Sum_probs=140.1
Q ss_pred ceEEEEECCCCCeEEEEEC--CCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecCCcceeEE
Q psy9770 577 ELWALAAHPSLSQFLTAGF--DRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSETREAYSI 653 (811)
Q Consensus 577 ~v~~l~~sp~~~~l~s~s~--dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~~~~~~~~ 653 (811)
...+++|++++.++++.+. ++.|.++|+.+++.+.............+..++..|+++. .++.+.++|..+.+.+..
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEE
Confidence 3579999998755555553 5799999999999998876555434333444455665554 578999999999999988
Q ss_pred ecCC-CCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecC-----CCCCeeEEEeCCCCCeEEEecCCce
Q psy9770 654 HTDG-NEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTG-----HSSFITHLDWSEDSMYIRSNSGDYE 727 (811)
Q Consensus 654 ~~~~-~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~-----h~~~V~~l~~spdg~~L~s~s~Dg~ 727 (811)
+... .. ...+++||+.|+++..++.|.++|..+.+ .+..+.- .-..++.+.|. +|...+....++.
T Consensus 102 i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~----v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 102 FTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTFK----LIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTCC----EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred EECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCCc----EEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 8644 22 24466788888887778899999987753 2333221 11246788888 7766666667889
Q ss_pred EEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCC-EEEEEcCCCcEEEEeCCCCC
Q psy9770 728 LLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDAR-VIATGDDFGKLKLYSYPAVQ 804 (811)
Q Consensus 728 i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~-~Las~~~dg~v~vw~~~~~~ 804 (811)
|.+-|+.+++.+..+..... . .. .+-.........+.|+|+|+++ +++++...++|.+.++....
T Consensus 174 V~vID~~tg~V~~~I~~~g~--------~--~~--~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNL--------R--KK--LIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEEETTTCCEEEEEECHHH--------H--HH--HHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EEEEECCCCcEEEEEECCCc--------c--cc--cccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 99999999987765431100 0 00 0000001123468999999986 55667788899998887654
No 253
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.91 E-value=0.00049 Score=83.97 Aligned_cols=469 Identities=11% Similarity=0.026 Sum_probs=246.9
Q ss_pred CCeEEEEEc---CCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCC
Q psy9770 300 DDIKCLSIH---PNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGND 376 (811)
Q Consensus 300 ~~V~~la~s---pdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d 376 (811)
..++.+... ....||+....+. + +|+.+. ++.+..+...++......++...-.++.++=. ..
T Consensus 426 ~~iWtl~~~~~~~~~~yLvlS~~~~--------T-~Vl~i~-~e~veev~~~gf~~~~~TL~~~~l~~~~ivQV----t~ 491 (1158)
T 3ei3_A 426 KGLWPLRSDPNRETDDTLVLSFVGQ--------T-RVLMLN-GEEVEETELMGFVDDQQTFFCGNVAHQQLIQI----TS 491 (1158)
T ss_dssp CEEEEECCCSSCSSCCEEEEEETTE--------E-EEEEEE-TTEEEEECCTTCCSSSCEEEEEEETTTEEEEE----ES
T ss_pred cEEEEEeecCCCCCCCEEEEECCCC--------e-EEEEEe-CCcccccccccccCCCCcEEEEEcCCCeEEEE----ec
Confidence 456666543 2356777776665 3 555542 22333333223322222222111113333322 24
Q ss_pred ceEEEEEcccCCCcceEEEeeeCC-CcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEE
Q psy9770 377 YNISVWDWQKSDRGHKITETKCSV-DTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCL 455 (811)
Q Consensus 377 ~~i~vWd~~~~~~~~~~~~~~~~~-~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l 455 (811)
..|++.+..... .+..+.... ..|...+.+. ..++++. .+.+.+++++.+ .+..... ..-...|.|+
T Consensus 492 ~~Irli~~~~~~---~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~-~L~~~~~-----~~l~~evscl 559 (1158)
T 3ei3_A 492 ASVRLVSQEPKA---LVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQ-ELRQISH-----TEMEHEVACL 559 (1158)
T ss_dssp SCEEEEESSSCC---EEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETT-EEEEEEE-----EECSSCEEEE
T ss_pred CEEEEEECCCCe---EEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCC-ceeeecc-----cCCCCceEEE
Confidence 456677765554 565655443 3566666653 4555554 577888888854 3332211 2224569999
Q ss_pred EEcCCC------c-EEEEcC-CCcEEEEecCCceEEEEeecccccceEEEEEec--CCcEEEEecCCCcEEEEeCC--CC
Q psy9770 456 AFTQGG------E-VLSGDS-NGNIIVWTRGSNTISKFIRNVHEGSVFSICVLK--EGSIISAGGKDGRLLQFDSN--LQ 523 (811)
Q Consensus 456 ~~s~~g------~-llsg~~-dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~--dg~~l~s~s~dg~I~~wd~~--~~ 523 (811)
++.+.+ . +++|.. |++|+|+++.+.+.+............++++.. ...+|..|-.||.+..+.++ ++
T Consensus 560 ~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg 639 (1158)
T 3ei3_A 560 DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETG 639 (1158)
T ss_dssp ECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTC
T ss_pred EeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCC
Confidence 997632 3 457775 999999999876655443312223444554432 34577888899988766554 33
Q ss_pred CccceeeeccccCCeEEEeeC-CCCeEEEEeCCCeEEEEEccCCceeeeeecccceE-EEEECCC--CCeEEEEECCCeE
Q psy9770 524 PTGYEAQIAEHLGGIRTVSEG-RGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELW-ALAAHPS--LSQFLTAGFDRIV 599 (811)
Q Consensus 524 ~~~~~~~~~~~~~~v~~l~~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~-~l~~sp~--~~~l~s~s~dg~v 599 (811)
.........-...++.-..+. .++.-+.+..+.-..++.-+.... ...-....+. ...|+.. ..-++..+ ++.+
T Consensus 640 ~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~-~s~l~~~~v~~~~~F~se~~~~g~v~~~-~~~L 717 (1158)
T 3ei3_A 640 LLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLV-FSNVNLKEVNYMCPLNSDGYPDSLALAN-NSTL 717 (1158)
T ss_dssp CEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEE-EEEBSSSCCCEEEEECCSSSTTEEEEEC-SSCE
T ss_pred ccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCCceE-EeccChHHhceEeccCcccCCCcEEEEc-CCce
Confidence 331111111112233333222 223333333344333443332211 1111112232 3334322 12344333 5568
Q ss_pred EEEeCCCCc--EEEEecCCCCeEEEEEcCCCCEEEEEEeC----------------------------------------
Q psy9770 600 QLWDSMSHS--VVWSKDIAEQAQSATFSPDGSIIIVGCIA---------------------------------------- 637 (811)
Q Consensus 600 ~iwd~~~~~--~~~~~~~~~~v~~~~~spdg~~la~g~~d---------------------------------------- 637 (811)
+|..+..-+ .+..+.....+..++++|+.+.++++..+
T Consensus 718 rI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1158)
T 3ei3_A 718 TIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 797 (1158)
T ss_dssp EEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC--------
T ss_pred EEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCch
Confidence 888775432 34456778899999999988877665422
Q ss_pred ---------CeEEEEecCCcceeEEec-CCCCCeEEEE---EccC-CCEEEEEe----------cCCcEEEEEecCCCcc
Q psy9770 638 ---------GRWLVMDSETREAYSIHT-DGNEPIQVVK---FSPD-GKLLALGS----------RDNYIYVYEVSGDSRK 693 (811)
Q Consensus 638 ---------g~i~i~d~~~~~~~~~~~-~~~~~i~~i~---~spd-g~~lasgs----------~dg~I~iwd~~~~~~~ 693 (811)
+.|+++|..+.+.+..+. ..++.+.+++ |..+ ..+|++|. ..|.|++|++... .
T Consensus 798 ~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~--k 875 (1158)
T 3ei3_A 798 TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG--K 875 (1158)
T ss_dssp --CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETT--E
T ss_pred hhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECC--E
Confidence 236677777776655544 2334455554 3332 47888886 3478999999843 4
Q ss_pred eeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCC----CCC--ccceeEeccceeeccceeee---
Q psy9770 694 YSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQ----SSQ--LRDVVWESNSCTLTFTTIGI--- 764 (811)
Q Consensus 694 ~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~i--- 764 (811)
.+.+.... ..+.|++++-- +|++|+.. ...|++|++...+.+.. +.. ...+....+...++.-..++
T Consensus 876 L~lv~~~~-v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~ 951 (1158)
T 3ei3_A 876 LQTVAEKE-VKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLL 951 (1158)
T ss_dssp EEEEEEEE-ESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEE
T ss_pred EEEEEEEE-cCCcCEEEeee-CCEEEEEc--CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEE
Confidence 55554433 46778888743 46555444 46899999976553330 000 00111111111111111111
Q ss_pred -CC----------CCCCCCccceEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy9770 765 -WP----------EGADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAV 803 (811)
Q Consensus 765 -~~----------~~~h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~ 803 (811)
|. .......++++.|-.++ .++.++.+|.|.++.++..
T Consensus 952 ~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 952 AYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp EEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECTT
T ss_pred EEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCCC
Confidence 11 12346678888887554 7777999999999998874
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.90 E-value=2e-06 Score=87.59 Aligned_cols=217 Identities=12% Similarity=-0.016 Sum_probs=145.8
Q ss_pred ceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCC-cEEEEecCCCcEEEEeCCCCCcc
Q psy9770 450 KYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEG-SIISAGGKDGRLLQFDSNLQPTG 526 (811)
Q Consensus 450 ~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg-~~l~s~s~dg~I~~wd~~~~~~~ 526 (811)
..+..++|++++. ++ +-..++.|.+++..+......+. ........+++.+++ .+.++-...+.|.+++++....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~- 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR-QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR- 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC-TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE-CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-
Confidence 3478999998654 44 66667899999998665444333 223567899999864 5555556678999999875433
Q ss_pred ceeeeccccCCeEEEeeCC-CCeEEEEeCC---CeEEEEEccCCceeeee-ecccceEEEEECCCCCeEEEE-ECCCeEE
Q psy9770 527 YEAQIAEHLGGIRTVSEGR-GSQLIVGTTR---NCILVGSLNLGFSPVVL-GHTDELWALAAHPSLSQFLTA-GFDRIVQ 600 (811)
Q Consensus 527 ~~~~~~~~~~~v~~l~~~~-~~~l~~~~~~---~~i~~~d~~~~~~~~~~-~h~~~v~~l~~sp~~~~l~s~-s~dg~v~ 600 (811)
.............+++.+ ++.++++... +.|..++++......+. ........+++++++..|+.+ ...+.|.
T Consensus 114 -~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 114 -RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp -EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred -EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 112222234567888888 6787777643 68888888765443332 233467899999987765554 4568999
Q ss_pred EEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecCCcceeEEecCCC-CCeEEEEEccCCC
Q psy9770 601 LWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSETREAYSIHTDGN-EPIQVVKFSPDGK 671 (811)
Q Consensus 601 iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~~~~~~~~~~~~~-~~i~~i~~spdg~ 671 (811)
++|..................+++. +..|+++. ..+.|.++|..+++.+..+.... .....+++.|++.
T Consensus 193 ~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 193 CLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 9999765443333333445667664 45555555 46899999999999888876443 2467788888865
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.89 E-value=8.7e-07 Score=100.71 Aligned_cols=275 Identities=11% Similarity=0.108 Sum_probs=166.4
Q ss_pred CCcEEEEcCCCcEEEEecCCceEEEEeecccccce--------EEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeee
Q psy9770 460 GGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSV--------FSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQI 531 (811)
Q Consensus 460 ~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V--------~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~ 531 (811)
++.+++++.++.|+.+|..+|+.+..+........ ..+++ .+..|+.++.|+.|..+|..+++.......
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 56666666644599999999998877652111100 12222 234555588899999999998887555544
Q ss_pred ccccC--Ce---EEEeeC-CCC--eEEEEeC------CCeEEEEEccCCceeeeeeccc---------------------
Q psy9770 532 AEHLG--GI---RTVSEG-RGS--QLIVGTT------RNCILVGSLNLGFSPVVLGHTD--------------------- 576 (811)
Q Consensus 532 ~~~~~--~v---~~l~~~-~~~--~l~~~~~------~~~i~~~d~~~~~~~~~~~h~~--------------------- 576 (811)
..+.. .+ ..+.-. .++ .+++++. ++.|+.+|..++...-......
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 33211 11 111111 112 5666553 6788888887764322111000
Q ss_pred --------------------ce-EEEEECCCCCeEEEEEC--------------------C----CeEEEEeCCCCcEEE
Q psy9770 577 --------------------EL-WALAAHPSLSQFLTAGF--------------------D----RIVQLWDSMSHSVVW 611 (811)
Q Consensus 577 --------------------~v-~~l~~sp~~~~l~s~s~--------------------d----g~v~iwd~~~~~~~~ 611 (811)
.+ ..+++.|+..+++.+.. | +.|..+|..+++.++
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 00 13456667777776663 2 589999999999999
Q ss_pred EecCCC----------CeEEEEEc-CCCC---EEEEEEeCCeEEEEecCCcceeEEecCCC-------------CC----
Q psy9770 612 SKDIAE----------QAQSATFS-PDGS---IIIVGCIAGRWLVMDSETREAYSIHTDGN-------------EP---- 660 (811)
Q Consensus 612 ~~~~~~----------~v~~~~~s-pdg~---~la~g~~dg~i~i~d~~~~~~~~~~~~~~-------------~~---- 660 (811)
.+.... ...-+... .+|+ .++.++.+|.++++|..+|+.+..+.... .+
T Consensus 306 ~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~ 385 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVERE 385 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECT
T ss_pred EEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEcc
Confidence 864321 11112222 5774 78889999999999999999876554321 00
Q ss_pred ----------------------------eEEEEEccCCCEEEEEe---------------------------------cC
Q psy9770 661 ----------------------------IQVVKFSPDGKLLALGS---------------------------------RD 679 (811)
Q Consensus 661 ----------------------------i~~i~~spdg~~lasgs---------------------------------~d 679 (811)
-..++|+|+..++++.. .+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~ 465 (582)
T 1flg_A 386 GQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHV 465 (582)
T ss_dssp TCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCS
T ss_pred ccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCc
Confidence 01356777665555433 25
Q ss_pred CcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCC
Q psy9770 680 NYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQ 741 (811)
Q Consensus 680 g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~ 741 (811)
|.|+.||+.+++..++........... +. ..+.+++.++.||.|+.||.++|+.+-.
T Consensus 466 G~l~A~D~~tG~~~W~~~~~~~~~~g~---~~--tagglvf~g~~dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEHLPLWAGV---LA--TAGNLVFTGTGDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSCC---EE--ETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ceEEEEECCCCCEEEEecCCCCCcccc---eE--eCCCEEEEECCCCcEEEEECCCCCEEEE
Confidence 778889998886555442211111111 11 2466888899999999999999997754
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.86 E-value=5.6e-07 Score=94.57 Aligned_cols=235 Identities=11% Similarity=0.029 Sum_probs=151.5
Q ss_pred ceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeec------------------cccCCeEEEeeCC-CCeEEEEe
Q psy9770 493 SVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIA------------------EHLGGIRTVSEGR-GSQLIVGT 553 (811)
Q Consensus 493 ~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~------------------~~~~~v~~l~~~~-~~~l~~~~ 553 (811)
...++++.++|++++++..++.|..|+...... ...... ........+++.+ ++.++++.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 456788899998777788899999999876544 111110 1123467888886 88999997
Q ss_pred CCCeEEEEEccCCceeeeee-----cccceEEEEECC-CCCeEEEEEC-----------------CCeEEEEeCCCCcEE
Q psy9770 554 TRNCILVGSLNLGFSPVVLG-----HTDELWALAAHP-SLSQFLTAGF-----------------DRIVQLWDSMSHSVV 610 (811)
Q Consensus 554 ~~~~i~~~d~~~~~~~~~~~-----h~~~v~~l~~sp-~~~~l~s~s~-----------------dg~v~iwd~~~~~~~ 610 (811)
..+.|..+|..++....+.. .......+++.+ +|.++++... ++.|..||..+++..
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 77778888877553333321 123468899999 8987766432 367899998777654
Q ss_pred EEecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecCCcc--eeEEecCCCCCeEEEEEccCCCEEEEEec---------
Q psy9770 611 WSKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSETRE--AYSIHTDGNEPIQVVKFSPDGKLLALGSR--------- 678 (811)
Q Consensus 611 ~~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~~~~--~~~~~~~~~~~i~~i~~spdg~~lasgs~--------- 678 (811)
...........++++|+|+.|+++. ..+.|.+|++.... ....+..... ...+++.++|+++++...
T Consensus 179 ~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~ 257 (322)
T 2fp8_A 179 LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGR 257 (322)
T ss_dssp EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSC
T ss_pred EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCC
Confidence 3322223456799999999777664 46899999987521 1111111223 678999999987666544
Q ss_pred -CCcEEEEEecCCCcceeEEEEecCC----CCCeeEEEeCCCCCeEEEecCCceEEEEECCC
Q psy9770 679 -DNYIYVYEVSGDSRKYSRVGRCTGH----SSFITHLDWSEDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 679 -dg~I~iwd~~~~~~~~~~~~~~~~h----~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
.+.|..++.. + +.+..+... ...++.+++ .+++++++....+.|..+++..
T Consensus 258 ~~~~v~~~d~~-G----~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 258 VDPKGIKFDEF-G----NILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEEEEEEECTT-S----CEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CccEEEEECCC-C----CEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 3456666643 2 223333322 245677777 4666666666788899999764
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.86 E-value=4.3e-07 Score=103.16 Aligned_cols=293 Identities=11% Similarity=0.007 Sum_probs=176.7
Q ss_pred CC-CceEEEEEc-ccCCCcceEEEeeeCCCc-----------EEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeecc
Q psy9770 374 GN-DYNISVWDW-QKSDRGHKITETKCSVDT-----------VVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQG 440 (811)
Q Consensus 374 s~-d~~i~vWd~-~~~~~~~~~~~~~~~~~~-----------V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~ 440 (811)
+. ++.|.-+|. ++++ .+.+....... ...++. .+..+++.+.++.|..+|..+|+.+.+...
T Consensus 69 ~~~~~~v~AlD~~~tG~---~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 143 (571)
T 2ad6_A 69 SAFPNNTYALNLNDPGK---IVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWEVEV 143 (571)
T ss_dssp CSTTTCEEEEETTCTTS---EEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eCCCCEEEEEeCCCCcc---EEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEEecC
Confidence 44 677888888 7887 66554432210 011222 266778888899999999998988876532
Q ss_pred cccccCCCCceEEEEEEcCCCcEEEEcC------CCcEEEEecCCceEEEEeeccccc----------------------
Q psy9770 441 IFEMIRDKPKYVTCLAFTQGGEVLSGDS------NGNIIVWTRGSNTISKFIRNVHEG---------------------- 492 (811)
Q Consensus 441 ~~~~l~~~~~~v~~l~~s~~g~llsg~~------dg~I~vwd~~~~~~~~~~~~~h~~---------------------- 492 (811)
.-.. .. ..+.+--...++.+++++. +|.|+.+|..+++.+..+......
T Consensus 144 ~~~~-~~--~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g 220 (571)
T 2ad6_A 144 CDPK-VG--STLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLG 220 (571)
T ss_dssp CCGG-GT--CBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHH
T ss_pred CCCC-cc--ceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccc
Confidence 1100 00 0111100012566666665 789999999999988776521100
Q ss_pred --------------ce-EEEEEecCCcEEEEecCC----------------CcEEEEeCCCCCccceeeecccc------
Q psy9770 493 --------------SV-FSICVLKEGSIISAGGKD----------------GRLLQFDSNLQPTGYEAQIAEHL------ 535 (811)
Q Consensus 493 --------------~V-~~l~~s~dg~~l~s~s~d----------------g~I~~wd~~~~~~~~~~~~~~~~------ 535 (811)
.+ ..+++.++...++.+..+ +.|..+|..+++.........+.
T Consensus 221 ~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~ 300 (571)
T 2ad6_A 221 TKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAG 300 (571)
T ss_dssp HHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCC
T ss_pred cccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccccccc
Confidence 00 135566665566555532 35999999988875554443321
Q ss_pred --CCeEEEeeCCCC----eEEEEeCCCeEEEEEccCCceeeee--ec-----------c-cce-----------------
Q psy9770 536 --GGIRTVSEGRGS----QLIVGTTRNCILVGSLNLGFSPVVL--GH-----------T-DEL----------------- 578 (811)
Q Consensus 536 --~~v~~l~~~~~~----~l~~~~~~~~i~~~d~~~~~~~~~~--~h-----------~-~~v----------------- 578 (811)
.++. +....++ .+++++.+|.++++|..++...-.. .. . .++
T Consensus 301 ~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~ 379 (571)
T 2ad6_A 301 VNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNIC 379 (571)
T ss_dssp CCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEES
T ss_pred CCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEEC
Confidence 1111 1122244 3556788889999998776332111 00 0 011
Q ss_pred ---------EEEEECCCCCeEEEEE-------------------------------------CCCeEEEEeCCCCcEEEE
Q psy9770 579 ---------WALAAHPSLSQFLTAG-------------------------------------FDRIVQLWDSMSHSVVWS 612 (811)
Q Consensus 579 ---------~~l~~sp~~~~l~s~s-------------------------------------~dg~v~iwd~~~~~~~~~ 612 (811)
..++++|+..+++... .++.|..||+.+++.++.
T Consensus 380 P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~ 459 (571)
T 2ad6_A 380 PSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWT 459 (571)
T ss_dssp SCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEE
T ss_pred CCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEE
Confidence 2356778777666653 357899999999999998
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCC-eEEEEEccCCCEEEE
Q psy9770 613 KDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEP-IQVVKFSPDGKLLAL 675 (811)
Q Consensus 613 ~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~i~~spdg~~las 675 (811)
......+....+...+..+++++.||.|+.||..+++.+..+...... -..+.|..+|+.++.
T Consensus 460 ~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 460 KWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp EEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 766555444444445677888999999999999999998887644321 122445567764443
No 258
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.86 E-value=4.3e-06 Score=85.04 Aligned_cols=228 Identities=11% Similarity=0.015 Sum_probs=145.6
Q ss_pred CcEEEEe-ccEEEEEeCCCCceE------EeccCCCCeEEEEEcCCCcEEEEeec-cCCCCCCCCCeEEEEeCCCCcEEE
Q psy9770 272 GEIVYFV-AAVAVLYNVEEQTQR------HYLGHTDDIKCLSIHPNKLLIATGQV-AGHDAREGKPHIRIWNSVSLFTVS 343 (811)
Q Consensus 272 g~~l~~~-~~~i~i~d~~~~~~~------~~~~h~~~V~~la~spdg~~Lasg~~-dg~~~~~~~~~I~iWd~~t~~~~~ 343 (811)
|.+|+++ .+.|..+++.+...+ .+......+..++|++++..|..+.. .+ .|.+++..+.....
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~--------~I~~~~~~g~~~~~ 72 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEP--------SIGRASLHGGEPTT 72 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTT--------EEEEEESSSCCCEE
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCC--------EEEEEecCCCCcEE
Confidence 3445554 468888888875432 22222346789999997766655543 44 89999998765544
Q ss_pred EeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECC--
Q psy9770 344 IIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGK-- 421 (811)
Q Consensus 344 ~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d-- 421 (811)
.+. ........+++++ ++..|+.. ....+.|.+++..... ..............++++|+++.++++...
T Consensus 73 ~~~--~~~~~p~~ia~d~--~~~~lyv~-d~~~~~I~~~~~~g~~---~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~ 144 (267)
T 1npe_A 73 IIR--QDLGSPEGIALDH--LGRTIFWT-DSQLDRIEVAKMDGTQ---RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRD 144 (267)
T ss_dssp EEC--TTCCCEEEEEEET--TTTEEEEE-ETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEETTTTEEEEEECCSS
T ss_pred EEE--CCCCCccEEEEEe--cCCeEEEE-ECCCCEEEEEEcCCCC---EEEEEECCCCCccEEEEeeCCCEEEEEECCCC
Confidence 432 2235678999998 55544433 4667899999987544 222222223567899999988888877653
Q ss_pred -CcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeecccccceEEEE
Q psy9770 422 -SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSIC 498 (811)
Q Consensus 422 -~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~ 498 (811)
+.|..++++ +....... .........+++++++. ++ +-...+.|.++|..+......+. . ......++
T Consensus 145 ~~~I~~~~~d-g~~~~~~~------~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~-~~~P~gi~ 215 (267)
T 1npe_A 145 NPKIETSHMD-GTNRRILA------QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE-G-LQYPFAVT 215 (267)
T ss_dssp SCEEEEEETT-SCCCEEEE------CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE-C-CCSEEEEE
T ss_pred CcEEEEEecC-CCCcEEEE------ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec-C-CCCceEEE
Confidence 577777776 43322211 11123478999999765 44 66667899999998655444433 2 23345676
Q ss_pred EecCCcEEEEecCCCcEEEEeCCCCCc
Q psy9770 499 VLKEGSIISAGGKDGRLLQFDSNLQPT 525 (811)
Q Consensus 499 ~s~dg~~l~s~s~dg~I~~wd~~~~~~ 525 (811)
.. ++.++++....+.|..+|..+++.
T Consensus 216 ~d-~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 216 SY-GKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp EE-TTEEEEEETTTTEEEEEETTTTEE
T ss_pred Ee-CCEEEEEECCCCeEEEEeCCCCCc
Confidence 65 455666555678999999887665
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.85 E-value=1.5e-06 Score=91.32 Aligned_cols=235 Identities=9% Similarity=0.010 Sum_probs=152.4
Q ss_pred EEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEeec------------------ccccceEEEEEec-CCcEEEEecC
Q psy9770 452 VTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRN------------------VHEGSVFSICVLK-EGSIISAGGK 511 (811)
Q Consensus 452 v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~~------------------~h~~~V~~l~~s~-dg~~l~s~s~ 511 (811)
..+++|.++|. ++++..++.|..|+..++........ .....+..+++.+ ++++++ +..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v-~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI-VDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE-EET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE-EEC
Confidence 45788999998 77888999999999887654432210 0123578999997 777666 444
Q ss_pred CCcEEEEeCCCCCccceee-ec-cccCCeEEEeeCC-CCeEEEEeCC------------------CeEEEEEccCCceee
Q psy9770 512 DGRLLQFDSNLQPTGYEAQ-IA-EHLGGIRTVSEGR-GSQLIVGTTR------------------NCILVGSLNLGFSPV 570 (811)
Q Consensus 512 dg~I~~wd~~~~~~~~~~~-~~-~~~~~v~~l~~~~-~~~l~~~~~~------------------~~i~~~d~~~~~~~~ 570 (811)
.+.|..+|...+....... .. ........+++.+ ++.++++... +.|+.+|..++....
T Consensus 100 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 100 YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 4558888877554311111 11 1123467788888 8888887543 678888887664443
Q ss_pred eeecccceEEEEECCCCCeEEEE-ECCCeEEEEeCCCC---cEEEEecCCCCeEEEEEcCCCCEEEEEEe----------
Q psy9770 571 VLGHTDELWALAAHPSLSQFLTA-GFDRIVQLWDSMSH---SVVWSKDIAEQAQSATFSPDGSIIIVGCI---------- 636 (811)
Q Consensus 571 ~~~h~~~v~~l~~sp~~~~l~s~-s~dg~v~iwd~~~~---~~~~~~~~~~~v~~~~~spdg~~la~g~~---------- 636 (811)
+.........++++|+++.|+.+ ...+.|.+|++... .........+ ...+++.++|.+.++...
T Consensus 180 ~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~ 258 (322)
T 2fp8_A 180 LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRV 258 (322)
T ss_dssp EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCE
T ss_pred eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCC
Confidence 33333455689999999866555 55689999998752 2111112334 888999999986666544
Q ss_pred CCeEEEEecCCcceeEEecCCC----CCeEEEEEccCCCEEEEEecCCcEEEEEecCC
Q psy9770 637 AGRWLVMDSETREAYSIHTDGN----EPIQVVKFSPDGKLLALGSRDNYIYVYEVSGD 690 (811)
Q Consensus 637 dg~i~i~d~~~~~~~~~~~~~~----~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~ 690 (811)
.+.|..+|.. ++.+..+.... ..++.+++ .+++++++....+.|.++++...
T Consensus 259 ~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 259 DPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred ccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 4678899874 77666665432 35677776 46665555556788999987653
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.82 E-value=7.1e-07 Score=101.22 Aligned_cols=291 Identities=11% Similarity=0.054 Sum_probs=174.8
Q ss_pred CC-CceEEEEEc-ccCCCcceEEEeeeCCCc-----------EEEEEecCCCCC----eEEEECCCcEEEEEEcCCceee
Q psy9770 374 GN-DYNISVWDW-QKSDRGHKITETKCSVDT-----------VVAAEFHPLDRN----NIVTCGKSHINFWTIDAGGTLY 436 (811)
Q Consensus 374 s~-d~~i~vWd~-~~~~~~~~~~~~~~~~~~-----------V~~v~fsp~~~~----ll~~~~d~~i~iwd~~~~~~~~ 436 (811)
+. ++.|.-+|. ++++ .+-+....... ...+++.|.+.. +++.+.++.|..+|..+|+.+.
T Consensus 69 ~~~~~~v~AlD~~~tG~---~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W 145 (599)
T 1w6s_A 69 TSFPNNTFALGLDDPGT---ILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVW 145 (599)
T ss_dssp CSTTTCEEEEETTCTTS---EEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEE
T ss_pred eCCCCEEEEEeCCCCCc---EEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEE
Confidence 44 677888888 7877 66555432210 123455444566 8888889999999999898887
Q ss_pred eecccccccCCCCceEEEEEEcCCCcEEEEc------CCCcEEEEecCCceEEEEeeccccc------------------
Q psy9770 437 KKQGIFEMIRDKPKYVTCLAFTQGGEVLSGD------SNGNIIVWTRGSNTISKFIRNVHEG------------------ 492 (811)
Q Consensus 437 ~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~------~dg~I~vwd~~~~~~~~~~~~~h~~------------------ 492 (811)
+....-.. .. ..+.+--...++.+++++ .+|.|+.+|..+|+.+..+......
T Consensus 146 ~~~~~~~~-~~--~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~ 222 (599)
T 1w6s_A 146 KVENSDIK-VG--STLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQ 222 (599)
T ss_dssp EEECCCGG-GT--CBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred eecCCCCC-cc--ceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccc
Confidence 65321100 00 011110001256666655 3799999999999988776522110
Q ss_pred ------------------ce-EEEEEecCCcEEEEecCC----------------CcEEEEeCCCCCccceeeeccccC-
Q psy9770 493 ------------------SV-FSICVLKEGSIISAGGKD----------------GRLLQFDSNLQPTGYEAQIAEHLG- 536 (811)
Q Consensus 493 ------------------~V-~~l~~s~dg~~l~s~s~d----------------g~I~~wd~~~~~~~~~~~~~~~~~- 536 (811)
.+ ..+++.++..+++.+..+ +.|..+|.++++.........+..
T Consensus 223 ~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~w 302 (599)
T 1w6s_A 223 KGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEW 302 (599)
T ss_dssp TTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccc
Confidence 00 134566666677666654 379999999888755554443321
Q ss_pred -------CeEEEeeC-CCC----eEEEEeCCCeEEEEEccCCceeeeee--------------cccce------------
Q psy9770 537 -------GIRTVSEG-RGS----QLIVGTTRNCILVGSLNLGFSPVVLG--------------HTDEL------------ 578 (811)
Q Consensus 537 -------~v~~l~~~-~~~----~l~~~~~~~~i~~~d~~~~~~~~~~~--------------h~~~v------------ 578 (811)
++. +... .++ .++.++.+|.++++|..++....... ...++
T Consensus 303 d~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~ 381 (599)
T 1w6s_A 303 DYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHL 381 (599)
T ss_dssp CCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCC
T ss_pred cccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCC
Confidence 111 1111 234 35557888999999987763321110 00011
Q ss_pred --------------EEEEECCCCCeEEEEE---------------------------------------CCCeEEEEeCC
Q psy9770 579 --------------WALAAHPSLSQFLTAG---------------------------------------FDRIVQLWDSM 605 (811)
Q Consensus 579 --------------~~l~~sp~~~~l~s~s---------------------------------------~dg~v~iwd~~ 605 (811)
..++++|+..++++.. .+|.|..||+.
T Consensus 382 ~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~ 461 (599)
T 1w6s_A 382 AKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAI 461 (599)
T ss_dssp EEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTT
T ss_pred ccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECC
Confidence 1355666655544321 34789999999
Q ss_pred CCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCC-eEEEEEccCCC
Q psy9770 606 SHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEP-IQVVKFSPDGK 671 (811)
Q Consensus 606 ~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~i~~spdg~ 671 (811)
+++.++......+...-.+...+.++++++.||.|+.||.++|+.+..++..... ..-+.|..||+
T Consensus 462 tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~ 528 (599)
T 1w6s_A 462 TGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGT 528 (599)
T ss_dssp TCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCE
Confidence 9999998765443332223345678888999999999999999998887643322 22355556665
No 261
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.81 E-value=1.3e-06 Score=99.18 Aligned_cols=289 Identities=12% Similarity=0.093 Sum_probs=172.1
Q ss_pred EEEEEcccCCCcceEEEeeeCCCc---------EEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeeccccccc-CC-
Q psy9770 379 ISVWDWQKSDRGHKITETKCSVDT---------VVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMI-RD- 447 (811)
Q Consensus 379 i~vWd~~~~~~~~~~~~~~~~~~~---------V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l-~~- 447 (811)
|.-+|.++++ .+.++...... ...+++ .+..+++.+.++.|..+|..+|+.+.+........ ..
T Consensus 80 v~AlD~~tG~---~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~ 154 (582)
T 1flg_A 80 LFALDAKTGK---RLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTM 154 (582)
T ss_dssp EEEEESSSCC---EEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBC
T ss_pred EEEEECCCCc---EEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCccc
Confidence 7777888877 55555433211 011222 25678888889999999999998887654221100 00
Q ss_pred CCceEEEEEEc-CCC--cEEEEc------CCCcEEEEecCCceEEEEeecccccce------------------------
Q psy9770 448 KPKYVTCLAFT-QGG--EVLSGD------SNGNIIVWTRGSNTISKFIRNVHEGSV------------------------ 494 (811)
Q Consensus 448 ~~~~v~~l~~s-~~g--~llsg~------~dg~I~vwd~~~~~~~~~~~~~h~~~V------------------------ 494 (811)
...++ +.-. .+| .+++++ .+|.|+.+|..+|+.+..... ....+
T Consensus 155 ~~sP~--v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~-~~~~~~p~~~~~~~~~g~~g~~~w~~~~~ 231 (582)
T 1flg_A 155 TGAPT--IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPF-VEGHMGRLNGKDSTVTGDVKAPSWPDDRN 231 (582)
T ss_dssp CSCCE--EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEES-STTCEEEETTEEEEESSCTTCTTSCBCTT
T ss_pred ccCCE--EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCC-CccccccccCcccccccccccccCCCccc
Confidence 01111 1111 123 344554 378999999999988876541 10000
Q ss_pred -----------------EEEEEecCCcEEEEecC--------------------C----CcEEEEeCCCCCccceeeecc
Q psy9770 495 -----------------FSICVLKEGSIISAGGK--------------------D----GRLLQFDSNLQPTGYEAQIAE 533 (811)
Q Consensus 495 -----------------~~l~~s~dg~~l~s~s~--------------------d----g~I~~wd~~~~~~~~~~~~~~ 533 (811)
..+++.++..+++.+.. | +.|..+|..+++.........
T Consensus 232 ~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~ 311 (582)
T 1flg_A 232 SPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTP 311 (582)
T ss_dssp STTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESST
T ss_pred cccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCC
Confidence 12456666666665542 2 689999999988755554443
Q ss_pred cc--------CCeEEEeeC-CCC----eEEEEeCCCeEEEEEccCCceeee-eecc-------------cc---------
Q psy9770 534 HL--------GGIRTVSEG-RGS----QLIVGTTRNCILVGSLNLGFSPVV-LGHT-------------DE--------- 577 (811)
Q Consensus 534 ~~--------~~v~~l~~~-~~~----~l~~~~~~~~i~~~d~~~~~~~~~-~~h~-------------~~--------- 577 (811)
+. .++. +... .++ .++.++.+|.++++|..++...-. .... .+
T Consensus 312 ~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~ 390 (582)
T 1flg_A 312 NDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPP 390 (582)
T ss_dssp TCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCC
T ss_pred CCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCc
Confidence 32 1111 1111 233 466788899999999877633211 0000 00
Q ss_pred -----------------------eEEEEECCCCCeEEEEE---------------------------------CCCeEEE
Q psy9770 578 -----------------------LWALAAHPSLSQFLTAG---------------------------------FDRIVQL 601 (811)
Q Consensus 578 -----------------------v~~l~~sp~~~~l~s~s---------------------------------~dg~v~i 601 (811)
-..++++|+..+++... .+|.|..
T Consensus 391 ~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A 470 (582)
T 1flg_A 391 LPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRA 470 (582)
T ss_dssp CCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEE
T ss_pred cccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEE
Confidence 01346666655555432 2588999
Q ss_pred EeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCe-EEEEEccCCC-EEEEE
Q psy9770 602 WDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPI-QVVKFSPDGK-LLALG 676 (811)
Q Consensus 602 wd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~i~~spdg~-~lasg 676 (811)
||+.+++.++......++..-.+...+.++++|+.||.++.||.++|+.+..++.....+ .-+.|..+|+ |+++.
T Consensus 471 ~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 471 MDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp ECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 999999999987655443332233356788889999999999999999998887543322 2366777886 44443
No 262
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.79 E-value=1.8e-07 Score=92.60 Aligned_cols=192 Identities=10% Similarity=0.041 Sum_probs=131.5
Q ss_pred eEEEEECCCCCeEEEEECCC--eEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecCCcceeEEe
Q psy9770 578 LWALAAHPSLSQFLTAGFDR--IVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSETREAYSIH 654 (811)
Q Consensus 578 v~~l~~sp~~~~l~s~s~dg--~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~~~~~~~~~ 654 (811)
..++.|+ ++.++.+.+.+| .|+++|+.+++.+.............+.+++..|...+ .++.+.+||..+.+.+..+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 4788888 677777777766 89999999999999987777766655555666666665 4789999999999999988
Q ss_pred cCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEec----CCC-CCeeEEEeCCCCCeEEEecCCceEE
Q psy9770 655 TDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCT----GHS-SFITHLDWSEDSMYIRSNSGDYELL 729 (811)
Q Consensus 655 ~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~----~h~-~~V~~l~~spdg~~L~s~s~Dg~i~ 729 (811)
..... ...+++|++.|+....++.|.++|..+.+ .+..+. +.. ..++.+.|. +|+..+..-.+..|.
T Consensus 124 ~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~----v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~ 195 (262)
T 3nol_A 124 NYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLT----PVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIV 195 (262)
T ss_dssp ECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCS----EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred ECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCe----EEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEE
Confidence 75432 23445688888777667889999988753 333322 111 345668886 787776666788999
Q ss_pred EEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcC
Q psy9770 730 YWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDD 791 (811)
Q Consensus 730 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~ 791 (811)
+.|.++|+.+..+....-. . .. . .......-.+.|||+|+++.|++.+.
T Consensus 196 vIDp~tG~V~~~Id~~~L~--------~--~~-~--~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 196 RIDPETGKVTGIIDLNGIL--------A--EA-G--PLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EECTTTCBEEEEEECTTGG--------G--GS-C--SCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEECCCCcEEEEEECCcCc--------c--cc-c--cccCcCCceEEEEEcCCCCEEEEECC
Confidence 9999999977654321000 0 00 0 00011335789999998776655544
No 263
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.79 E-value=1.8e-07 Score=103.33 Aligned_cols=229 Identities=10% Similarity=0.103 Sum_probs=153.5
Q ss_pred CCCc--EEEEcCCCcEEEEecCCceEEEEeecccccceEEEEE-e-cCCcEEEEec------------------CCCcEE
Q psy9770 459 QGGE--VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICV-L-KEGSIISAGG------------------KDGRLL 516 (811)
Q Consensus 459 ~~g~--llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~-s-~dg~~l~s~s------------------~dg~I~ 516 (811)
+||+ +++...++.|.+.|+.+.++.+.+.......+..+++ . |++.++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 3677 3366667889999999999888665334456888888 4 8999998774 345789
Q ss_pred EEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeC-C--------------------------------------Ce
Q psy9770 517 QFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTT-R--------------------------------------NC 557 (811)
Q Consensus 517 ~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~-~--------------------------------------~~ 557 (811)
++|.++.+......+.+. ...++.++++..+..+. + +.
T Consensus 179 vID~~t~~v~~qI~Vgg~---pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGN---LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEETTTTEEEEEEEESSC---CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEECCCCeEEEEEEeCCC---ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 999988776444444332 33455566554443322 2 12
Q ss_pred EEEEEccC--Cce-eeeeecccceEEEEECCCCCeEEEEE-CCCeEEEEeCCCCc------------EEEEecCCCCeEE
Q psy9770 558 ILVGSLNL--GFS-PVVLGHTDELWALAAHPSLSQFLTAG-FDRIVQLWDSMSHS------------VVWSKDIAEQAQS 621 (811)
Q Consensus 558 i~~~d~~~--~~~-~~~~~h~~~v~~l~~sp~~~~l~s~s-~dg~v~iwd~~~~~------------~~~~~~~~~~v~~ 621 (811)
|.+.|..+ +.. .....-.....++.++|||++++.++ .+.+|.++|+.+.+ .............
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h 335 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH 335 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEE
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcce
Confidence 45555554 211 11111223556899999999777765 57899999998653 4555677788999
Q ss_pred EEEcCCCCEEEEEEeCCeEEEEecCC----------cceeEEecCCCCCe-----EEEEEccCCCEEEEEec---CCc--
Q psy9770 622 ATFSPDGSIIIVGCIAGRWLVMDSET----------REAYSIHTDGNEPI-----QVVKFSPDGKLLALGSR---DNY-- 681 (811)
Q Consensus 622 ~~~spdg~~la~g~~dg~i~i~d~~~----------~~~~~~~~~~~~~i-----~~i~~spdg~~lasgs~---dg~-- 681 (811)
++|+|+|...++...+++|.+||+.. .+.+..+..|-.+- ..+.++|||++|+++.. |..
T Consensus 336 ~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~ 415 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLN 415 (595)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCC
T ss_pred EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccccc
Confidence 99999995445666799999999987 45666666654322 12356899999999753 432
Q ss_pred --------EEEEEecCC
Q psy9770 682 --------IYVYEVSGD 690 (811)
Q Consensus 682 --------I~iwd~~~~ 690 (811)
-.++|+..+
T Consensus 416 ~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 416 VGPLKPENDQLIDISGD 432 (595)
T ss_dssp CCSSCCEEEEEEECSSS
T ss_pred CCCCCCCcceEEEcCCC
Confidence 288999654
No 264
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.78 E-value=0.0013 Score=80.30 Aligned_cols=429 Identities=14% Similarity=0.137 Sum_probs=235.3
Q ss_pred cEEEEeccEEEEEeCCCCceEEe--ccCCCCeEEEEEcCC------CcEEEEeec-cCCCCCCCCCeEEEEeCCCCcEEE
Q psy9770 273 EIVYFVAAVAVLYNVEEQTQRHY--LGHTDDIKCLSIHPN------KLLIATGQV-AGHDAREGKPHIRIWNSVSLFTVS 343 (811)
Q Consensus 273 ~~l~~~~~~i~i~d~~~~~~~~~--~~h~~~V~~la~spd------g~~Lasg~~-dg~~~~~~~~~I~iWd~~t~~~~~ 343 (811)
.++.+.++.++.++++.+..... ..-...|.|+++.|. +.++|.|.. |+ +|+|+++.+.+.+.
T Consensus 525 ~vvva~g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~--------tv~I~sL~~l~~~~ 596 (1158)
T 3ei3_A 525 QVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDI--------SARILKLPSFELLH 596 (1158)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTT--------EEEEEETTTCCEEE
T ss_pred EEEEEECCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCC--------EEEEEECCCCCeEE
Confidence 34444466777777765432221 122568999999874 479999996 88 99999999988887
Q ss_pred EeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcc--cCCCcceEE--EeeeCCCcEEEEEecCCCCCeEEEE
Q psy9770 344 IIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQ--KSDRGHKIT--ETKCSVDTVVAAEFHPLDRNNIVTC 419 (811)
Q Consensus 344 ~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~--~~~~~~~~~--~~~~~~~~V~~v~fsp~~~~ll~~~ 419 (811)
...++. .....++.+...++..+|.. |-.||.+.-+.+. ++. ... ...-...++.-..|...+..-+.++
T Consensus 597 ~~~L~~-~~~p~si~l~~~~~~~~L~i--gl~dG~l~~~~~d~~tg~---l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~ 670 (1158)
T 3ei3_A 597 KEMLGG-EIIPRSILMTTFESSHYLLC--ALGDGALFYFGLNIETGL---LSDRKKVTLGTQPTVLRTFRSLSTTNVFAC 670 (1158)
T ss_dssp EEECCS-SCCEEEEEEEEETTEEEEEE--EETTSEEEEEEECTTTCC---EEEEEEEECCSSCCEEEEEESSSCEEEEEE
T ss_pred EEECCC-CCCCcEEEEEEeCCCcEEEE--EeCCCeEEEEEEcCCCCc---cccceeEEcCCCceEEEEEeeCCceeEEEE
Confidence 655432 12334444432113455554 6788888766654 343 221 1222234555555554455556666
Q ss_pred CCCcEEEEEEcCCceeeeecccccccCCCCceE-EEEEEcCCC---cEEEEcCCCcEEEEecCCce--EEEEeecccccc
Q psy9770 420 GKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYV-TCLAFTQGG---EVLSGDSNGNIIVWTRGSNT--ISKFIRNVHEGS 493 (811)
Q Consensus 420 ~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v-~~l~~s~~g---~llsg~~dg~I~vwd~~~~~--~~~~~~~~h~~~ 493 (811)
++....+|.-+ +....... .+ ..+ ....|+... .++. ..++.++|..+...+ .++.+. -...
T Consensus 671 s~rp~liy~~~-~~l~~s~l-~~-------~~v~~~~~F~se~~~~g~v~-~~~~~LrI~~i~~~~~~~~~~ip--L~~T 738 (1158)
T 3ei3_A 671 SDRPTVIYSSN-HKLVFSNV-NL-------KEVNYMCPLNSDGYPDSLAL-ANNSTLTIGTIDEIQKLHIRTVP--LYES 738 (1158)
T ss_dssp SSSCEEEEESS-SSEEEEEB-SS-------SCCCEEEEECCSSSTTEEEE-ECSSCEEEEEECCSSSEEEEEEE--CSSE
T ss_pred CCCCEEEEEcC-CceEEecc-Ch-------HHhceEeccCcccCCCcEEE-EcCCceEEEEecccCCeeEEEEe--CCCC
Confidence 66655555433 32211110 00 112 233343322 1443 334568888765322 223332 3346
Q ss_pred eEEEEEecCCcEEEEecCC-------------------------------------------------CcEEEEeCCCCC
Q psy9770 494 VFSICVLKEGSIISAGGKD-------------------------------------------------GRLLQFDSNLQP 524 (811)
Q Consensus 494 V~~l~~s~dg~~l~s~s~d-------------------------------------------------g~I~~wd~~~~~ 524 (811)
+..++++|+.+.++.+..+ +.|++.|..+.+
T Consensus 739 prri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~ 818 (1158)
T 3ei3_A 739 PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFE 818 (1158)
T ss_dssp EEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCC
T ss_pred ceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCe
Confidence 6777777765544332211 235555554443
Q ss_pred ccceeeeccccCCeEEEe---eCC--CCeEEEEe----------CCCeEEEEEccCCceeee--eecccceEEEEECCCC
Q psy9770 525 TGYEAQIAEHLGGIRTVS---EGR--GSQLIVGT----------TRNCILVGSLNLGFSPVV--LGHTDELWALAAHPSL 587 (811)
Q Consensus 525 ~~~~~~~~~~~~~v~~l~---~~~--~~~l~~~~----------~~~~i~~~d~~~~~~~~~--~~h~~~v~~l~~sp~~ 587 (811)
......+... ..+.+++ +.. ...+++|+ ..|.|+++++.......+ ....+.+++++-- +|
T Consensus 819 ~i~~~~l~~n-E~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g 896 (1158)
T 3ei3_A 819 VLHAHQFLQN-EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG 896 (1158)
T ss_dssp EEEEEECCTT-EEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT
T ss_pred EEEEEeCCCC-cceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC
Confidence 3222223222 2233333 433 35677776 357899999875433332 2345788888754 34
Q ss_pred CeEEEEECCCeEEEEeCCCCcEEE-EecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEe--cCCcceeEEec-CCCCCeEE
Q psy9770 588 SQFLTAGFDRIVQLWDSMSHSVVW-SKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMD--SETREAYSIHT-DGNEPIQV 663 (811)
Q Consensus 588 ~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d--~~~~~~~~~~~-~~~~~i~~ 663 (811)
+|+++- .++|++|++...+.+. ....-..+..+.....+.++++|..-..+.++. ....+....-+ .....+++
T Consensus 897 -~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta 974 (1158)
T 3ei3_A 897 -KLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSA 974 (1158)
T ss_dssp -EEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEE
T ss_pred -EEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEE
Confidence 444443 4799999998765433 111111233334434678999998877776654 44443333222 24567888
Q ss_pred EEEccCCCEEEEEecCCcEEEEEecCCC------cceeEEEEecCCCCCeeEEE---eCCCC---------CeEEEecCC
Q psy9770 664 VKFSPDGKLLALGSRDNYIYVYEVSGDS------RKYSRVGRCTGHSSFITHLD---WSEDS---------MYIRSNSGD 725 (811)
Q Consensus 664 i~~spdg~~lasgs~dg~I~iwd~~~~~------~~~~~~~~~~~h~~~V~~l~---~spdg---------~~L~s~s~D 725 (811)
+.|-.++ .++.+..+|.|.++...... .+......+. ....|+++. +.+.+ ..++.++.+
T Consensus 975 ~~~ld~~-t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fh-lG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~ 1052 (1158)
T 3ei3_A 975 VEILDDD-NFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFH-LGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVN 1052 (1158)
T ss_dssp EEEEETT-EEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEE-CSSCEEEEEECCSCCC-------CEEEEEEEEETT
T ss_pred EEEEccC-cEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEe-CCCcEeeEEeeeeecCCCccccccccceEEEEecC
Confidence 8887654 67778999999999886531 2333443433 234577765 33322 346777788
Q ss_pred ceEEEEEC
Q psy9770 726 YELLYWNA 733 (811)
Q Consensus 726 g~i~iWd~ 733 (811)
|.|-+.-.
T Consensus 1053 GsIg~l~p 1060 (1158)
T 3ei3_A 1053 GMIGLVTS 1060 (1158)
T ss_dssp SCEEEEEE
T ss_pred CEEEEEEE
Confidence 88877654
No 265
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.76 E-value=1.1e-06 Score=88.16 Aligned_cols=204 Identities=5% Similarity=-0.017 Sum_probs=137.4
Q ss_pred ceEEEEeeccccc--ceEEEEEecCCcEEEEecC--CCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEe-C
Q psy9770 480 NTISKFIRNVHEG--SVFSICVLKEGSIISAGGK--DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGT-T 554 (811)
Q Consensus 480 ~~~~~~~~~~h~~--~V~~l~~s~dg~~l~s~s~--dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~-~ 554 (811)
.+.+..+. |.. ....+.|++++.+.++.+. ++.|.++|+.+++......+..+.. ...+++.. +.+++.+ .
T Consensus 9 ~~vv~~~p--~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~f-geGi~~~g-~~lyv~t~~ 84 (266)
T 2iwa_A 9 VEVLNEFP--HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYF-GEGLTLLN-EKLYQVVWL 84 (266)
T ss_dssp EEEEEEEE--CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCC-EEEEEEET-TEEEEEETT
T ss_pred ceEEEEEE--CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcc-eEEEEEeC-CEEEEEEec
Confidence 34555664 543 3579999998866665553 5799999999988744444433322 23455543 4666554 4
Q ss_pred CCeEEEEEccCCce-eeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCCC------CeEEEEEcCC
Q psy9770 555 RNCILVGSLNLGFS-PVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAE------QAQSATFSPD 627 (811)
Q Consensus 555 ~~~i~~~d~~~~~~-~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~------~v~~~~~spd 627 (811)
++.+.++|..+... ..+......-+. +++|++.++.+..++.|.++|..+.+.+..+.... .+..+.|. +
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~g~g--lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d 161 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKDGWG--LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N 161 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSSCCE--EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECCCCcEEEEEECCCCCeEE--EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-C
Confidence 67999999887532 223211122233 45577777777778999999999998887765432 36678887 7
Q ss_pred CCEEEEEEeCCeEEEEecCCcceeEEecCC-------------CCCeEEEEEccCCCEEE-EEecCCcEEEEEecCC
Q psy9770 628 GSIIIVGCIAGRWLVMDSETREAYSIHTDG-------------NEPIQVVKFSPDGKLLA-LGSRDNYIYVYEVSGD 690 (811)
Q Consensus 628 g~~la~g~~dg~i~i~d~~~~~~~~~~~~~-------------~~~i~~i~~spdg~~la-sgs~dg~I~iwd~~~~ 690 (811)
|...+....++.|.+.|..+++.+..+.-. ......|+|+|+++.|+ ++...+.+++.++...
T Consensus 162 g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 755544446789999999999988887532 13568999999987554 5556788988888763
No 266
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.62 E-value=5.1e-05 Score=79.62 Aligned_cols=273 Identities=10% Similarity=0.079 Sum_probs=156.0
Q ss_pred ceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeec---ccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCcc
Q psy9770 450 KYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRN---VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTG 526 (811)
Q Consensus 450 ~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~---~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~ 526 (811)
..+.++.|.+++.+++++..|.|.. ....++.-..+.. .....+.+|.|.+ +..++ ++.++.|+.- .+.++.
T Consensus 36 ~~~~~v~~~~~~~~~~~G~~g~i~~-s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~S-~DgG~t- 110 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVGVNATLME-TRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLHT-TDGGQS- 110 (327)
T ss_dssp SCEEEEEESSSSCEEEEETTTEEEE-ESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEEE-SSTTSS-
T ss_pred CcEEEEEECCCCcEEEEcCCCeEEE-eCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEEE-CCCCCC-
Confidence 3588999987777554566776543 3333432222210 1244688999976 45544 4556655442 222222
Q ss_pred ceee-ec-cccCCeEEEeeCCCCeEEEEeCCCeEEEE-EccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEe
Q psy9770 527 YEAQ-IA-EHLGGIRTVSEGRGSQLIVGTTRNCILVG-SLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWD 603 (811)
Q Consensus 527 ~~~~-~~-~~~~~v~~l~~~~~~~l~~~~~~~~i~~~-d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd 603 (811)
.... .. ...+.+..+.+.+++.+++++..+.|+.- |--.........+...+..+++.+++.+++.+...+..+-+|
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d 190 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWE 190 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEEC
T ss_pred ceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeC
Confidence 1111 11 12244666776666777777777765442 212223333345556789999999888777665444444444
Q ss_pred C--CCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecC----CCCCeEEEEEccCCCEEEEEe
Q psy9770 604 S--MSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTD----GNEPIQVVKFSPDGKLLALGS 677 (811)
Q Consensus 604 ~--~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~----~~~~i~~i~~spdg~~lasgs 677 (811)
- .+-+.+ .......+..+++.+++..+++ +.+|.+++.+...++....+.. ....+..+++.+++.+++++.
T Consensus 191 ~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 191 PGQTAWEPH-NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp TTCSSCEEE-ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred CCCCceeEC-CCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 3 222222 2234567889999999876654 5678877764333443333321 224588999999888777654
Q ss_pred cCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEEC
Q psy9770 678 RDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNA 733 (811)
Q Consensus 678 ~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~ 733 (811)
++.| ++. .+++..+..+.....+...+.++.|.+++. +++++.+|.|.-++-
T Consensus 269 -~g~i-~~S-~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 269 -AGAL-LCS-QDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp -TTCE-EEE-SSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred -CCeE-EEe-CCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 6666 233 444455654332223345678898875554 566678898776653
No 267
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.60 E-value=1.5e-06 Score=100.93 Aligned_cols=268 Identities=13% Similarity=0.052 Sum_probs=152.8
Q ss_pred EEEEcC-CCcEE-EEcCCC-----------cEEEEecCCceEEEE--eecccccceEEEEEecCCcEEEEecC-CCcEEE
Q psy9770 454 CLAFTQ-GGEVL-SGDSNG-----------NIIVWTRGSNTISKF--IRNVHEGSVFSICVLKEGSIISAGGK-DGRLLQ 517 (811)
Q Consensus 454 ~l~~s~-~g~ll-sg~~dg-----------~I~vwd~~~~~~~~~--~~~~h~~~V~~l~~s~dg~~l~s~s~-dg~I~~ 517 (811)
++++.+ +++++ .|+.+. .+.+||..+++.... +...+.....++++..++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 77744 555432 588999988764432 22123333445777889999998884 458999
Q ss_pred EeCCCCCccceeeeccccCCeEEEeeCCCCe-EEEEe-CC-----CeEEEEEccCCceeeeee-----cccceEEEEECC
Q psy9770 518 FDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQ-LIVGT-TR-----NCILVGSLNLGFSPVVLG-----HTDELWALAAHP 585 (811)
Q Consensus 518 wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-l~~~~-~~-----~~i~~~d~~~~~~~~~~~-----h~~~v~~l~~sp 585 (811)
||..+........++..... .+++..++++ +++|+ .+ ..+.+||..+..-..+.. ....-....+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 99877654222222222112 2334443444 44555 23 478999987764333210 000000012234
Q ss_pred CCCeEEEEECCC---------eEEEEeCCCCcEEEEecC----------CCCeEEEEEc-CCCCEEEEEEeCC-------
Q psy9770 586 SLSQFLTAGFDR---------IVQLWDSMSHSVVWSKDI----------AEQAQSATFS-PDGSIIIVGCIAG------- 638 (811)
Q Consensus 586 ~~~~l~s~s~dg---------~v~iwd~~~~~~~~~~~~----------~~~v~~~~~s-pdg~~la~g~~dg------- 638 (811)
++..++.++.++ .+..||..+......... .....++.|. .+++++++|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 455556665443 567888877654332111 1123445554 3788888887543
Q ss_pred ----eEEEEecCCcceeEEe--cCCCCC-eEEEEEccCCCEEEEEecC-----------CcEEEEEecCCCcceeEEEEe
Q psy9770 639 ----RWLVMDSETREAYSIH--TDGNEP-IQVVKFSPDGKLLALGSRD-----------NYIYVYEVSGDSRKYSRVGRC 700 (811)
Q Consensus 639 ----~i~i~d~~~~~~~~~~--~~~~~~-i~~i~~spdg~~lasgs~d-----------g~I~iwd~~~~~~~~~~~~~~ 700 (811)
.+.+||..+..-.... ..+... -.+++..|+|++++.|+.+ ..+.+||..++ .+..+..+
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~--~W~~~~~~ 506 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD--TFYKQNPN 506 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT--EEEECCCC
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC--ceeecCCC
Confidence 6888888776544332 112222 2455677899999999854 46899998774 34443333
Q ss_pred cCCCCCeeEEEeCCCCCeEEEecC
Q psy9770 701 TGHSSFITHLDWSEDSMYIRSNSG 724 (811)
Q Consensus 701 ~~h~~~V~~l~~spdg~~L~s~s~ 724 (811)
...........+.|||+.++.|+.
T Consensus 507 ~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 507 SIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCccccccHhhcCCCcEEEecCCC
Confidence 322333344566799999999885
No 268
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.60 E-value=3e-06 Score=83.13 Aligned_cols=191 Identities=11% Similarity=0.039 Sum_probs=130.0
Q ss_pred ceEEEEECCCCCeEEEEECC--CeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEE-EeCCeEEEEecCCcceeEE
Q psy9770 577 ELWALAAHPSLSQFLTAGFD--RIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVG-CIAGRWLVMDSETREAYSI 653 (811)
Q Consensus 577 ~v~~l~~sp~~~~l~s~s~d--g~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g-~~dg~i~i~d~~~~~~~~~ 653 (811)
-..++.|++ +.++.+.+.+ ..|+.+|+.+++.+.............+.+++..|... ..++.+.+||..+.+.+.+
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRAR 100 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEE
Confidence 466889986 5666666665 48999999999999998777766555555555556554 4588999999999999998
Q ss_pred ecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecC--CC---CCeeEEEeCCCCCeEEEecCCceE
Q psy9770 654 HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTG--HS---SFITHLDWSEDSMYIRSNSGDYEL 728 (811)
Q Consensus 654 ~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~--h~---~~V~~l~~spdg~~L~s~s~Dg~i 728 (811)
+...... ..+.+|+..|+.+..++.|.++|..+.+ .+.++.- +. ..++.+.|. +|+..+....+..|
T Consensus 101 i~~~~~G---wglt~dg~~L~vSdgs~~l~~iDp~t~~----~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I 172 (243)
T 3mbr_X 101 FRYPGEG---WALTSDDSHLYMSDGTAVIRKLDPDTLQ----QVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRI 172 (243)
T ss_dssp EECSSCC---CEEEECSSCEEEECSSSEEEEECTTTCC----EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEE
T ss_pred EeCCCCc---eEEeeCCCEEEEECCCCeEEEEeCCCCe----EEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeE
Confidence 8854433 3344678877777778899999988753 3333321 11 345677776 77766666667899
Q ss_pred EEEECCCCcccCCCCCccceeEeccceeeccceeeeCCC-----CCCCCccceEEecCCCCEEE-EEcCCC
Q psy9770 729 LYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPE-----GADGTDVNSCERSHDARVIA-TGDDFG 793 (811)
Q Consensus 729 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~h~~~I~~l~~s~dg~~La-s~~~dg 793 (811)
.+.|.++|+.+..+.... +.+. .....-.+.||++|+++.|+ ||-.--
T Consensus 173 ~vIDp~tG~V~~~idl~~-----------------l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp 226 (243)
T 3mbr_X 173 ARIDPASGKVVAWIDLQA-----------------LVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWP 226 (243)
T ss_dssp EEECTTTCBEEEEEECGG-----------------GSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCS
T ss_pred EEEECCCCCEEEEEECCc-----------------CccccccccCCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 999999999776543210 1111 01234578999999866554 554433
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.57 E-value=0.00012 Score=77.44 Aligned_cols=237 Identities=13% Similarity=0.026 Sum_probs=153.1
Q ss_pred ccceEEccCCcEEEEeccEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEee-ccCCCCCCCCCeEEEEeCCCCcE
Q psy9770 263 RSNLYLLPTGEIVYFVAAVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQ-VAGHDAREGKPHIRIWNSVSLFT 341 (811)
Q Consensus 263 ~~~l~~spdg~~l~~~~~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~-~dg~~~~~~~~~I~iWd~~t~~~ 341 (811)
..+.+..+++.++++..+.|...++.+.....+......+..++|++....|.... ..+ .|..++..+...
T Consensus 36 ~~C~~~~~~~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~--------~I~r~~~~g~~~ 107 (349)
T 3v64_C 36 RSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLD--------RILRANLNGSNV 107 (349)
T ss_dssp SCEEESSSCCEEEEECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTT--------EEEEEETTSCSC
T ss_pred CcccccccCceeEeecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCC--------ceEEEecCCCCc
Confidence 34445556555666666788889998876655555556789999998766665554 344 899999987765
Q ss_pred EEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC-
Q psy9770 342 VSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG- 420 (811)
Q Consensus 342 ~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~- 420 (811)
...+. ........+++.+ .++.+.++ ....+.|.+.+..... ....+.........+++.|.++.++.+..
T Consensus 108 ~~~~~--~~~~~p~glavd~-~~g~ly~~--d~~~~~I~~~~~dG~~---~~~l~~~~l~~P~~iavdp~~g~ly~td~~ 179 (349)
T 3v64_C 108 EEVVS--TGLESPGGLAVDW-VHDKLYWT--DSGTSRIEVANLDGAH---RKVLLWQSLEKPRAIALHPMEGTIYWTDWG 179 (349)
T ss_dssp EEEEC--SSCSCCCEEEEET-TTTEEEEE--ETTTTEEEEEETTSCS---CEEEECTTCSCEEEEEEETTTTEEEEEECS
T ss_pred eEEEe--CCCCCccEEEEec-CCCeEEEE--cCCCCeEEEEcCCCCc---eEEEEeCCCCCcceEEEecCcCeEEEeccC
Confidence 44443 2234557889987 23444444 4667899999987654 33333334456789999998888887765
Q ss_pred C-CcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeecccccceEEE
Q psy9770 421 K-SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSI 497 (811)
Q Consensus 421 d-~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l 497 (811)
. +.|..++++ +....... ...-...+.+++++++. ++ +-...+.|..+++........+. ........|
T Consensus 180 ~~~~I~r~~~d-G~~~~~~~------~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~-~~~~~P~gi 251 (349)
T 3v64_C 180 NTPRIEASSMD-GSGRRIIA------DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QGLPHPFAI 251 (349)
T ss_dssp SSCEEEEEETT-SCSCEESC------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSSEEEE
T ss_pred CCCEEEEEeCC-CCCcEEEE------ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe-CCCCCceEE
Confidence 3 567777766 43322211 11123478999997655 44 65667889999987544333333 334456778
Q ss_pred EEecCCcEEEEecCCCcEEEEeCCCCC
Q psy9770 498 CVLKEGSIISAGGKDGRLLQFDSNLQP 524 (811)
Q Consensus 498 ~~s~dg~~l~s~s~dg~I~~wd~~~~~ 524 (811)
++ .++.++++-...+.|..++..++.
T Consensus 252 av-~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 252 TV-FEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred EE-ECCEEEEecCCCCeEEEEEccCCC
Confidence 87 456666666777888888854443
No 270
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.55 E-value=3e-05 Score=80.57 Aligned_cols=224 Identities=11% Similarity=0.059 Sum_probs=140.2
Q ss_pred ceEEEEEEcCCCcEE-EEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCC--CcEEEEeCCCCCcc
Q psy9770 450 KYVTCLAFTQGGEVL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKD--GRLLQFDSNLQPTG 526 (811)
Q Consensus 450 ~~v~~l~~s~~g~ll-sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~d--g~I~~wd~~~~~~~ 526 (811)
.....++|.++|.++ +-..++.|..||.... ....+. ....+..+++.++|+++++.... ..|..+|...+...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~--~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT--VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE--CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe--CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 346789999999866 4457899999998754 333333 33568899999999977654332 24777777666542
Q ss_pred ceeeeccccCCeEEEeeCCCCeEEEEe-CCCeEEEEEccCCceeee-----------eecccceEEEEECCCCCeEEEE-
Q psy9770 527 YEAQIAEHLGGIRTVSEGRGSQLIVGT-TRNCILVGSLNLGFSPVV-----------LGHTDELWALAAHPSLSQFLTA- 593 (811)
Q Consensus 527 ~~~~~~~~~~~v~~l~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~-----------~~h~~~v~~l~~sp~~~~l~s~- 593 (811)
....+.. ......++..+++.+++.. ..+.|+++|...+..... .........+ +|+++.|+.+
T Consensus 109 ~~~~~~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 109 TLLTLPD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEECTT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEEeCCC-ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 2222221 2223344445666666665 478899998765311111 0111234455 7778755554
Q ss_pred ECCCeEEEEeCCC-CcE--EEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeE--EecCCCCCeEEEEEc-
Q psy9770 594 GFDRIVQLWDSMS-HSV--VWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYS--IHTDGNEPIQVVKFS- 667 (811)
Q Consensus 594 s~dg~v~iwd~~~-~~~--~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~--~~~~~~~~i~~i~~s- 667 (811)
...+.|..|++.. ++. ...+........++++++|+++++....+.|.++|.. ++... .+.......++++|.
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECC
T ss_pred CCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEec
Confidence 4578999999874 321 1111112346678999999877776667899999975 65532 334334568999998
Q ss_pred --cCCCEEEEEecCC
Q psy9770 668 --PDGKLLALGSRDN 680 (811)
Q Consensus 668 --pdg~~lasgs~dg 680 (811)
||++.|++++..+
T Consensus 265 ~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 265 TEGDCTAIYVVTNGG 279 (306)
T ss_dssp STTTTTEEEEEECTT
T ss_pred ccCCCCEEEEECCCC
Confidence 8888777766543
No 271
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.54 E-value=1.4e-06 Score=86.16 Aligned_cols=194 Identities=12% Similarity=0.058 Sum_probs=128.8
Q ss_pred eEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEE-EeCCeEEEEecCCcceeEEecC
Q psy9770 578 LWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVG-CIAGRWLVMDSETREAYSIHTD 656 (811)
Q Consensus 578 v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g-~~dg~i~i~d~~~~~~~~~~~~ 656 (811)
..++.|+ ++.++++.+.+|.|+++|+.+++.+... .........+.+++..|... ..++.+.+||..+.+.+.++..
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 4688887 4667778888899999999999998887 66665553334444445444 4588999999999999998875
Q ss_pred CCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecC--CC---CCeeEEEeCCCCCeEEEecCCceEEEE
Q psy9770 657 GNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTG--HS---SFITHLDWSEDSMYIRSNSGDYELLYW 731 (811)
Q Consensus 657 ~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~--h~---~~V~~l~~spdg~~L~s~s~Dg~i~iW 731 (811)
.... ..+++|++.|+.+..++.|+++|..+.+ .+.++.- +. ..++.+.|. +|+..+....+..|.+-
T Consensus 135 ~~eG---wGLt~Dg~~L~vSdGs~~l~~iDp~T~~----v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 135 SGEG---WGLCYWNGKLVRSDGGTMLTFHEPDGFA----LVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp SSCC---CCEEEETTEEEEECSSSEEEEECTTTCC----EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred CCce---eEEecCCCEEEEECCCCEEEEEcCCCCe----EEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEE
Confidence 4332 2334688888887778899999988753 3333221 21 245678887 77766666678899999
Q ss_pred ECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCC-EEEEEcCCC
Q psy9770 732 NAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDAR-VIATGDDFG 793 (811)
Q Consensus 732 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~-~Las~~~dg 793 (811)
|.++|+.+..+....-.. .... .......-.+.||++|+++ +++||-.--
T Consensus 207 Dp~TG~V~~~Idl~~L~~--------~~~~----~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp 257 (268)
T 3nok_A 207 DPATGTVVGVIDASALTR--------AVAG----QVTNPEAVLNGIAVEPGSGRIFMTGKLWP 257 (268)
T ss_dssp CTTTCBEEEEEECHHHHH--------HHTT----TCCCTTCCEEEEEECTTTCCEEEEETTCS
T ss_pred eCCCCcEEEEEECCCCcc--------cccc----cccCcCCceEEEEEcCCCCEEEEeCCCCC
Confidence 999999776543210000 0000 0011234578999999765 555654433
No 272
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.54 E-value=7.1e-05 Score=77.69 Aligned_cols=224 Identities=10% Similarity=0.003 Sum_probs=134.0
Q ss_pred cceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeee
Q psy9770 492 GSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVV 571 (811)
Q Consensus 492 ~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~ 571 (811)
.....++|.++|+++++-..++.|..||.+.... . ++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~---~------------------------------~~---------- 68 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ---I------------------------------HA---------- 68 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE---E------------------------------EE----------
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE---E------------------------------EE----------
Confidence 4567888888888777666778888887653211 0 00
Q ss_pred eecccceEEEEECCCCCeEEEEECC--CeEEEEeCCCCcEEEEecC--CCCeEEEEEcCCCCEEEEEEeCCeEEEEecCC
Q psy9770 572 LGHTDELWALAAHPSLSQFLTAGFD--RIVQLWDSMSHSVVWSKDI--AEQAQSATFSPDGSIIIVGCIAGRWLVMDSET 647 (811)
Q Consensus 572 ~~h~~~v~~l~~sp~~~~l~s~s~d--g~v~iwd~~~~~~~~~~~~--~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~ 647 (811)
.......++++.++++++++.... ..|..+|..+++....... ......++..+++..+++-..+|.|+++|...
T Consensus 69 -~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 69 -TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp -ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred -eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 011246688888888866655432 2466677777765433222 22345556666554444443588999999875
Q ss_pred cc--eeEEe--------cCCCCCeEEEEEccCCCEEEEEe-cCCcEEEEEecC-CCc-ceeEEEEecCCCCCeeEEEeCC
Q psy9770 648 RE--AYSIH--------TDGNEPIQVVKFSPDGKLLALGS-RDNYIYVYEVSG-DSR-KYSRVGRCTGHSSFITHLDWSE 714 (811)
Q Consensus 648 ~~--~~~~~--------~~~~~~i~~i~~spdg~~lasgs-~dg~I~iwd~~~-~~~-~~~~~~~~~~h~~~V~~l~~sp 714 (811)
++ ..... ...-.....| ++|+++|+.+. ..+.|+.|++.. +.. ..+.+..+ .....+++.+
T Consensus 148 ~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~----~~P~gi~vd~ 221 (306)
T 2p4o_A 148 PSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ----TNIDDFAFDV 221 (306)
T ss_dssp TEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES----CCCSSEEEBT
T ss_pred CcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc----CCCCCeEECC
Confidence 42 21110 0111234455 88988776654 467899999875 211 11222221 3456789999
Q ss_pred CCCeEEEecCCceEEEEECCCCcccC--CCCCccceeEeccceeeccceeeeCCCCCCCCccceEEec---CCCCEEEEE
Q psy9770 715 DSMYIRSNSGDYELLYWNAGTCRQIP--QSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERS---HDARVIATG 789 (811)
Q Consensus 715 dg~~L~s~s~Dg~i~iWd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s---~dg~~Las~ 789 (811)
+|+++++....+.|.+++.. |+... ... ......++++|. +|++.|.++
T Consensus 222 dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~-------------------------~~~~~p~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 222 EGNLYGATHIYNSVVRIAPD-RSTTIIAQAE-------------------------QGVIGSTAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp TCCEEEECBTTCCEEEECTT-CCEEEEECGG-------------------------GTCTTEEEEEECCSTTTTTEEEEE
T ss_pred CCCEEEEeCCCCeEEEECCC-CCEEEEeecc-------------------------cccCCceEEEEecccCCCCEEEEE
Confidence 99988887778899999875 54321 110 012357899998 887776655
Q ss_pred cC
Q psy9770 790 DD 791 (811)
Q Consensus 790 ~~ 791 (811)
+.
T Consensus 276 ~~ 277 (306)
T 2p4o_A 276 TN 277 (306)
T ss_dssp EC
T ss_pred CC
Confidence 44
No 273
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.52 E-value=2.2e-05 Score=77.55 Aligned_cols=190 Identities=13% Similarity=0.118 Sum_probs=127.3
Q ss_pred eEEEEeecccccc--eEEEEEecCCcEEEEecCCC--cEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEe-CC
Q psy9770 481 TISKFIRNVHEGS--VFSICVLKEGSIISAGGKDG--RLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGT-TR 555 (811)
Q Consensus 481 ~~~~~~~~~h~~~--V~~l~~s~dg~~l~s~s~dg--~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~-~~ 555 (811)
+.+..+. |... ...+.|+ ++.+..+.+.+| .|+.+|+.+++......+..... -..++.. ++.+++.+ .+
T Consensus 32 ~vv~~~p--hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~F-geGit~~-g~~ly~ltw~~ 106 (262)
T 3nol_A 32 QIVHSYP--HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYF-GEGISDW-KDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEE--CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCC-EEEEEEE-TTEEEEEESSS
T ss_pred EEEEEec--CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccc-eeEEEEe-CCEEEEEEeeC
Confidence 3455554 5444 4788898 777777777776 89999999988744444433221 1234443 34666555 47
Q ss_pred CeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCC------CCeEEEEEcCCCC
Q psy9770 556 NCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIA------EQAQSATFSPDGS 629 (811)
Q Consensus 556 ~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~------~~v~~~~~spdg~ 629 (811)
+.+.++|..+............-+.++ ++++.|+.+..++.|.++|..+.+.+..+... ..+..+.|. +|+
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ 183 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE 183 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred CEEEEEECccCcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE
Confidence 799999998764332222222223444 46776766666788999999999888775442 234457776 776
Q ss_pred EEEEEEeCCeEEEEecCCcceeEEecCC------------CCCeEEEEEccCCCEEEEEec
Q psy9770 630 IIIVGCIAGRWLVMDSETREAYSIHTDG------------NEPIQVVKFSPDGKLLALGSR 678 (811)
Q Consensus 630 ~la~g~~dg~i~i~d~~~~~~~~~~~~~------------~~~i~~i~~spdg~~lasgs~ 678 (811)
..+....++.|.+.|..+++.+..+... ....+.|+|+|+++.|++.+.
T Consensus 184 lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 184 IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 5555556889999999999988877532 234688999999887777664
No 274
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.52 E-value=2.7e-05 Score=77.00 Aligned_cols=190 Identities=10% Similarity=0.073 Sum_probs=127.0
Q ss_pred eEEEEeeccccc--ceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeE
Q psy9770 481 TISKFIRNVHEG--SVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCI 558 (811)
Q Consensus 481 ~~~~~~~~~h~~--~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i 558 (811)
+.+..+. |.. ....+.|. ++.+..+.+.+|.|+++|+++++..... +.... .-..++...+..+++.-.++.+
T Consensus 44 ~Vv~~~p--hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~-FgeGit~~g~~Ly~ltw~~~~v 118 (268)
T 3nok_A 44 HIIREYP--HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI-FAEGLASDGERLYQLTWTEGLL 118 (268)
T ss_dssp EEEEEEE--CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC-CEEEEEECSSCEEEEESSSCEE
T ss_pred EEEEEEc--CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc-ceeEEEEeCCEEEEEEccCCEE
Confidence 4445554 443 34788887 4678888889999999999998884444 44321 1233555544444444457799
Q ss_pred EEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCCC------CeEEEEEcCCCCEEE
Q psy9770 559 LVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAE------QAQSATFSPDGSIII 632 (811)
Q Consensus 559 ~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~------~v~~~~~spdg~~la 632 (811)
.++|..+............-++++ ++++.|+.+..++.|.++|..+.+.+..+.... .++.+.|. +|+..+
T Consensus 119 ~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lya 195 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYA 195 (268)
T ss_dssp EEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEE
Confidence 999998764332222233334555 467777777778999999999998887764422 44667776 776555
Q ss_pred EEEeCCeEEEEecCCcceeEEecCC-------------CCCeEEEEEccCCCEEEEEec
Q psy9770 633 VGCIAGRWLVMDSETREAYSIHTDG-------------NEPIQVVKFSPDGKLLALGSR 678 (811)
Q Consensus 633 ~g~~dg~i~i~d~~~~~~~~~~~~~-------------~~~i~~i~~spdg~~lasgs~ 678 (811)
....++.|.+.|..+++.+..+.-. ..-.+.|+|+|+++.|++.+.
T Consensus 196 nvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 196 NIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 4446889999999999988776521 235688999998766555543
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.51 E-value=0.0001 Score=79.13 Aligned_cols=236 Identities=12% Similarity=0.014 Sum_probs=152.1
Q ss_pred ceEEccCCcEEEEeccEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEee-ccCCCCCCCCCeEEEEeCCCCcEEE
Q psy9770 265 NLYLLPTGEIVYFVAAVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQ-VAGHDAREGKPHIRIWNSVSLFTVS 343 (811)
Q Consensus 265 ~l~~spdg~~l~~~~~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~-~dg~~~~~~~~~I~iWd~~t~~~~~ 343 (811)
..+..+++.++++..+.|..+++.+.....+......+..++|++.+..|.... ..+ .|..++..+.....
T Consensus 81 C~~~~~~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~--------~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 81 CKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLD--------RILRANLNGSNVEE 152 (386)
T ss_dssp EEECSSCCEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTT--------EEEEEETTSCCEEE
T ss_pred ECCccccceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCC--------cEEEEecCCCCcEE
Confidence 344445555566656889999998876666555556789999998666665554 334 89999998776554
Q ss_pred EeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECC--
Q psy9770 344 IIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGK-- 421 (811)
Q Consensus 344 ~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d-- 421 (811)
.+. ........+++.+ .++.+.++ ....+.|.+.++.... ....+.........+++.|.++.++++...
T Consensus 153 ~~~--~~~~~p~glavd~-~~g~lY~~--d~~~~~I~~~~~dg~~---~~~l~~~~l~~P~giavdp~~g~ly~td~~~~ 224 (386)
T 3v65_B 153 VVS--TGLESPGGLAVDW-VHDKLYWT--DSGTSRIEVANLDGAH---RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT 224 (386)
T ss_dssp EEC--SSCSCCCCEEEET-TTTEEEEE--ETTTTEEEECBTTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEECSSS
T ss_pred EEe--CCCCCccEEEEEe-CCCeEEEE--cCCCCeEEEEeCCCCc---eEEeecCCCCCCcEEEEEcCCCeEEEeccCCC
Confidence 443 2234456788887 23444444 4667789998887554 333333344577999999988888887653
Q ss_pred CcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeecccccceEEEEE
Q psy9770 422 SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICV 499 (811)
Q Consensus 422 ~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~ 499 (811)
+.|..++++ +....... ...-...+.+++++++. ++ +-...+.|..+|+........+. ........|++
T Consensus 225 ~~I~r~~~d-G~~~~~~~------~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~P~giav 296 (386)
T 3v65_B 225 PRIEASSMD-GSGRRIIA------DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QGLPHPFAITV 296 (386)
T ss_dssp CEEEEEETT-SCSCEEEE------CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC-SSCSSEEEEEE
T ss_pred CEEEEEeCC-CCCcEEEE------ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE-CCCCCceEEEE
Confidence 567777665 33222221 11123478999997654 44 66667889999987544333333 33445678888
Q ss_pred ecCCcEEEEecCCCcEEEEeCCCCCc
Q psy9770 500 LKEGSIISAGGKDGRLLQFDSNLQPT 525 (811)
Q Consensus 500 s~dg~~l~s~s~dg~I~~wd~~~~~~ 525 (811)
.++.++++-...+.|..++..++..
T Consensus 297 -~~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 297 -FEDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp -ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred -ECCEEEEeeCCCCeEEEEECCCCcc
Confidence 4556667677788898888544443
No 276
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.47 E-value=0.00031 Score=73.54 Aligned_cols=272 Identities=13% Similarity=0.090 Sum_probs=148.4
Q ss_pred cccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceee-e--ccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCC
Q psy9770 490 HEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ-I--AEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLG 566 (811)
Q Consensus 490 h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~-~--~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~ 566 (811)
....+.+|.|.+++..++ ++.+|.|.. ..+.++. .... . ......+..+.+.+ +.+++++..+.|+. ..+.+
T Consensus 34 ~~~~~~~v~~~~~~~~~~-~G~~g~i~~-s~DgG~t-W~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG 108 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWL-VGVNATLME-TRDGGQT-WEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLH-TTDGG 108 (327)
T ss_dssp CSSCEEEEEESSSSCEEE-EETTTEEEE-ESSTTSS-CEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEE-ESSTT
T ss_pred CCCcEEEEEECCCCcEEE-EcCCCeEEE-eCCCCCC-CeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEE-ECCCC
Confidence 345788998887777777 445676533 3332221 1111 1 11234577788776 56666666676554 22222
Q ss_pred c--eeeee--ecccceEEEEECCCCCeEEEEECCCeE-EEEeCCCCcEEEE--ecCCCCeEEEEEcCCCCEEEEEEeCCe
Q psy9770 567 F--SPVVL--GHTDELWALAAHPSLSQFLTAGFDRIV-QLWDSMSHSVVWS--KDIAEQAQSATFSPDGSIIIVGCIAGR 639 (811)
Q Consensus 567 ~--~~~~~--~h~~~v~~l~~sp~~~~l~s~s~dg~v-~iwd~~~~~~~~~--~~~~~~v~~~~~spdg~~la~g~~dg~ 639 (811)
. ..... .+.+.+..+.+.+++..++.+ .++.| +-.| .++.-.. ......+..+++.+++.+++++. .|.
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~ 184 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGS 184 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSS
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCc
Confidence 1 11111 133457778877666655544 45544 2222 2322111 23455788999999998887764 444
Q ss_pred EEE-Eec--CCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEe-cCCCCCeeEEEeCCC
Q psy9770 640 WLV-MDS--ETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRC-TGHSSFITHLDWSED 715 (811)
Q Consensus 640 i~i-~d~--~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~-~~h~~~V~~l~~spd 715 (811)
+.. .|- .+.+.+. ......+..+.+.++++++++ +.+|.+++.+.+ +...+..+..- ..+...+.++.+.++
T Consensus 185 ~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D-~G~tW~~~~~~~~~~~~~~~~v~~~~~ 260 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPD-NSENWGELLSPLRRNSVGFLDLAYRTP 260 (327)
T ss_dssp EEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETT-EEEEECCCBCTTSSCCSCEEEEEESSS
T ss_pred EEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEE-eCCceEEEecCC-CCCeeEeccCCcccCCcceEEEEecCC
Confidence 443 332 2222322 234567889999999986655 467877765422 22233322111 012345889999988
Q ss_pred CCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCCcE
Q psy9770 716 SMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFGKL 795 (811)
Q Consensus 716 g~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg~v 795 (811)
+..++++ .+|.| ++..+.|+.-...... ......+.++.|.++++ +++++.+|.|
T Consensus 261 ~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~----------------------~~~~~~~~~v~~~~~~~-~~~~G~~G~i 315 (327)
T 2xbg_A 261 NEVWLAG-GAGAL-LCSQDGGQTWQQDVDV----------------------KKVPSNFYKILFFSPDQ-GFILGQKGIL 315 (327)
T ss_dssp SCEEEEE-STTCE-EEESSTTSSCEECGGG----------------------TTSSSCCCEEEEEETTE-EEEECSTTEE
T ss_pred CEEEEEe-CCCeE-EEeCCCCcccEEcCcc----------------------CCCCCCeEEEEEECCCc-eEEEcCCceE
Confidence 8777765 46666 4555555422211100 00134578888886655 5556667877
Q ss_pred EEEe
Q psy9770 796 KLYS 799 (811)
Q Consensus 796 ~vw~ 799 (811)
.-++
T Consensus 316 ~~~~ 319 (327)
T 2xbg_A 316 LRYV 319 (327)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6665
No 277
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.41 E-value=1.1e-05 Score=93.48 Aligned_cols=240 Identities=9% Similarity=-0.005 Sum_probs=134.8
Q ss_pred EEEEec-CCcEEEEecCCC-----------cEEEEeCCCCCccceeeeccc-cCCeEEEeeCCCCeEEE-Ee-CCCeEEE
Q psy9770 496 SICVLK-EGSIISAGGKDG-----------RLLQFDSNLQPTGYEAQIAEH-LGGIRTVSEGRGSQLIV-GT-TRNCILV 560 (811)
Q Consensus 496 ~l~~s~-dg~~l~s~s~dg-----------~I~~wd~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~l~~-~~-~~~~i~~ 560 (811)
.+++.+ ++++++.|+.+. .+.+||..+........++.. ......+++..++.+++ |+ ....+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 788888776543 588999988776333333222 22233455556565555 44 3458999
Q ss_pred EEccCCceeeeee-cc-cceEEEEECCCCCeEEEEE-CC-----CeEEEEeCCCCcEEEEe-----cCCCCeEEEEEcCC
Q psy9770 561 GSLNLGFSPVVLG-HT-DELWALAAHPSLSQFLTAG-FD-----RIVQLWDSMSHSVVWSK-----DIAEQAQSATFSPD 627 (811)
Q Consensus 561 ~d~~~~~~~~~~~-h~-~~v~~l~~sp~~~~l~s~s-~d-----g~v~iwd~~~~~~~~~~-----~~~~~v~~~~~spd 627 (811)
||..+..-..+.. +. ..-.++++.++++.++.|+ .+ ..+.+||..+.+..... .....-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 9988763322211 11 1223456667899999988 44 56999999887644321 01100001122345
Q ss_pred CCEEEEEEeCC---------eEEEEecCCcceeEEecCCC---------CCeEEEEEc-cCCCEEEEEecCC--------
Q psy9770 628 GSIIIVGCIAG---------RWLVMDSETREAYSIHTDGN---------EPIQVVKFS-PDGKLLALGSRDN-------- 680 (811)
Q Consensus 628 g~~la~g~~dg---------~i~i~d~~~~~~~~~~~~~~---------~~i~~i~~s-pdg~~lasgs~dg-------- 680 (811)
++.++.|+.+| .+..||..+..-......+. ..-.++.|. .++++++.|+.++
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 66666665554 46788887765333222111 123445554 3788888887542
Q ss_pred ---cEEEEEecCCCcceeEEEEecCCCCC-eeEEEeCCCCCeEEEecCC-----------ceEEEEECCCCc
Q psy9770 681 ---YIYVYEVSGDSRKYSRVGRCTGHSSF-ITHLDWSEDSMYIRSNSGD-----------YELLYWNAGTCR 737 (811)
Q Consensus 681 ---~I~iwd~~~~~~~~~~~~~~~~h~~~-V~~l~~spdg~~L~s~s~D-----------g~i~iWd~~~~~ 737 (811)
.|.+||..+. .+..+..-..+... -.+....|++++++.|+.+ ..+.+||..+.+
T Consensus 430 ~~~~v~~yd~~~~--~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 430 NAHIITLGEPGTS--PNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp CEEEEECCSTTSC--CEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred cceEEEcCCCCCC--CeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 5777776654 23332100112222 2345667899999999865 457888876543
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.40 E-value=4.8e-05 Score=82.99 Aligned_cols=256 Identities=10% Similarity=-0.031 Sum_probs=148.9
Q ss_pred CeEEEeeCC---CCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECC---C-eEEEEeCCCCcE
Q psy9770 537 GIRTVSEGR---GSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFD---R-IVQLWDSMSHSV 609 (811)
Q Consensus 537 ~v~~l~~~~---~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d---g-~v~iwd~~~~~~ 609 (811)
....+++.+ ++.|+++...+.|+.++..++....+........+++++++++++++.... . .+...+...+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 356778886 488888876689999999777666665556678999999999944444321 1 233333222111
Q ss_pred -EEEecCCCCeEEEEEcC-CCCEEEEEEeCCeEEEEecCCcceeE-EecC-CCCCeEEEEEccCCCEEEEEe-cCCcEEE
Q psy9770 610 -VWSKDIAEQAQSATFSP-DGSIIIVGCIAGRWLVMDSETREAYS-IHTD-GNEPIQVVKFSPDGKLLALGS-RDNYIYV 684 (811)
Q Consensus 610 -~~~~~~~~~v~~~~~sp-dg~~la~g~~dg~i~i~d~~~~~~~~-~~~~-~~~~i~~i~~spdg~~lasgs-~dg~I~i 684 (811)
............++++| +|.++++-..++.|+.+|..++.... .+.. ....-..|+|+|+|++|+.+. ..+.|+.
T Consensus 220 ~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~ 299 (433)
T 4hw6_A 220 ERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYR 299 (433)
T ss_dssp CEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEE
Confidence 01112234566788999 66666565567899999998776522 2221 122334699999999666554 4578988
Q ss_pred EEecCCCcceeEEEEecC---------------CCCCeeEEEe---------CCCCCeEEEecCCceEEEEECCCCcccC
Q psy9770 685 YEVSGDSRKYSRVGRCTG---------------HSSFITHLDW---------SEDSMYIRSNSGDYELLYWNAGTCRQIP 740 (811)
Q Consensus 685 wd~~~~~~~~~~~~~~~~---------------h~~~V~~l~~---------spdg~~L~s~s~Dg~i~iWd~~~~~~~~ 740 (811)
+++......+.....+.+ .-.....+++ .++|.++++-.....|+.++. +|....
T Consensus 300 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t 378 (433)
T 4hw6_A 300 VDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTT 378 (433)
T ss_dssp EEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEE
T ss_pred EeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEE
Confidence 887642211111111111 1123567888 777777777777788888875 453221
Q ss_pred CCCCccceeEeccceeeccceeeeCCCCCCCCccceEEec-CCCCEEEEEcCCCcEEEEeCC
Q psy9770 741 QSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERS-HDARVIATGDDFGKLKLYSYP 801 (811)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s-~dg~~Las~~~dg~v~vw~~~ 801 (811)
...... .+..++ ..+.......-.....|++. ++|.++++-..++.|+.++++
T Consensus 379 ~~G~g~-------~~~~G~-~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 379 YAGRGN-------SREWGY-VDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EECCCT-------TCSSCC-BCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEeCCC-------CCcccc-CCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 111000 000000 00000111112346789999 677777766677788888764
No 279
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.40 E-value=0.00014 Score=71.20 Aligned_cols=190 Identities=15% Similarity=0.157 Sum_probs=125.9
Q ss_pred eEEEEeecccc--cceEEEEEecCCcEEEEecCCC--cEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEE-eCC
Q psy9770 481 TISKFIRNVHE--GSVFSICVLKEGSIISAGGKDG--RLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVG-TTR 555 (811)
Q Consensus 481 ~~~~~~~~~h~--~~V~~l~~s~dg~~l~s~s~dg--~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~-~~~ 555 (811)
+.+..+. |+ .-...+.|+. +.+..+.+.+| .|+.+|+.+++......++..... ..++... +.++.. -.+
T Consensus 10 ~v~~~~p--hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fg-eGi~~~~-~~ly~ltw~~ 84 (243)
T 3mbr_X 10 RVVKRYP--HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFG-AGIVAWR-DRLIQLTWRN 84 (243)
T ss_dssp EEEEEEE--CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCE-EEEEEET-TEEEEEESSS
T ss_pred EEEEEcC--CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcce-eEEEEeC-CEEEEEEeeC
Confidence 4455554 54 4466899986 66777777754 899999999888555555443322 2233333 455554 457
Q ss_pred CeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecCC------CCeEEEEEcCCCC
Q psy9770 556 NCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIA------EQAQSATFSPDGS 629 (811)
Q Consensus 556 ~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~------~~v~~~~~spdg~ 629 (811)
+.+.++|..+............-++++ +++..|+.+..++.|.++|..+.+.+..+... ..++.+.+. +|+
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred CEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE
Confidence 799999998764332222233334555 45666666667889999999999888776542 245566665 676
Q ss_pred EEEEEEeCCeEEEEecCCcceeEEecC-------------CCCCeEEEEEccCCCEEEEEec
Q psy9770 630 IIIVGCIAGRWLVMDSETREAYSIHTD-------------GNEPIQVVKFSPDGKLLALGSR 678 (811)
Q Consensus 630 ~la~g~~dg~i~i~d~~~~~~~~~~~~-------------~~~~i~~i~~spdg~~lasgs~ 678 (811)
..+....+..|.+.|..+++.+..+.- ...-.+.|+|+|+++.|.+.+.
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 555555688999999999998877652 1235688999998877666654
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=5e-05 Score=82.88 Aligned_cols=152 Identities=12% Similarity=0.109 Sum_probs=101.6
Q ss_pred CeEEEeeCC--CCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECC-C----eEEEEeCCCCcE
Q psy9770 537 GIRTVSEGR--GSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFD-R----IVQLWDSMSHSV 609 (811)
Q Consensus 537 ~v~~l~~~~--~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~d-g----~v~iwd~~~~~~ 609 (811)
....++++| ++.++++...+.|+.+|+..+....+.........+++++++++|+.+... + .+.+++. .+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCce
Confidence 456778885 477777766688999999887655555555678899999999966666542 1 3333443 2222
Q ss_pred E--EEecCCCCeEEEEEcC-CCCEEEEEEeCCeEEEEecCCcceeEEec-CCCCCeEEEEEccCCCEEEEE-ecCCcEEE
Q psy9770 610 V--WSKDIAEQAQSATFSP-DGSIIIVGCIAGRWLVMDSETREAYSIHT-DGNEPIQVVKFSPDGKLLALG-SRDNYIYV 684 (811)
Q Consensus 610 ~--~~~~~~~~v~~~~~sp-dg~~la~g~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~i~~spdg~~lasg-s~dg~I~i 684 (811)
. ..+........++++| +|.++++-..++.|..|+...+....... .....-..|+|+|+|++|+.+ ...+.|+.
T Consensus 217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 217 KVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp CSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 1 1222234567888999 67666666677899999998765422222 122346789999999965555 45678999
Q ss_pred EEecC
Q psy9770 685 YEVSG 689 (811)
Q Consensus 685 wd~~~ 689 (811)
++...
T Consensus 297 ~~~d~ 301 (430)
T 3tc9_A 297 SDYDW 301 (430)
T ss_dssp EEEET
T ss_pred EeCCc
Confidence 88875
No 281
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.34 E-value=0.00069 Score=70.49 Aligned_cols=228 Identities=9% Similarity=-0.002 Sum_probs=143.6
Q ss_pred EEEEeccEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEeec-cCCCCCCCCCeEEEEeCCC----CcEEEEeccC
Q psy9770 274 IVYFVAAVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQV-AGHDAREGKPHIRIWNSVS----LFTVSIIGIG 348 (811)
Q Consensus 274 ~l~~~~~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~~-dg~~~~~~~~~I~iWd~~t----~~~~~~l~~~ 348 (811)
++++..+.|...|+.+.....+......+..++|++++..|..... .+ .|..+++.+ ......+.
T Consensus 4 ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~--------~I~~~~~~g~~~~~~~~~~~~-- 73 (316)
T 1ijq_A 4 LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQR--------MICSTQLDRAHGVSSYDTVIS-- 73 (316)
T ss_dssp EEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTT--------EEEEEEC--------CEEEEC--
T ss_pred EEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCC--------cEEEEECCCCCCCcccEEEEe--
Confidence 3444457888999988766555555677899999997666655544 34 899999876 22222222
Q ss_pred CccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECC--CcEEE
Q psy9770 349 EFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGK--SHINF 426 (811)
Q Consensus 349 ~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d--~~i~i 426 (811)
..-.....+++.+ .++.+.++ ....+.|.+.+..... ....+.........+++.|.++.++++... +.|..
T Consensus 74 ~~~~~p~glavd~-~~~~ly~~--d~~~~~I~~~~~~g~~---~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~ 147 (316)
T 1ijq_A 74 RDIQAPDGLAVDW-IHSNIYWT--DSVLGTVSVADTKGVK---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 147 (316)
T ss_dssp SSCSCCCEEEEET-TTTEEEEE--ETTTTEEEEEETTSSS---EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCCCCcCEEEEee-cCCeEEEE--ECCCCEEEEEeCCCCc---eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEE
Confidence 2224567889986 13444444 4678899999987554 222233344577899999988888887653 56777
Q ss_pred EEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeec-ccccceEEEEEecCC
Q psy9770 427 WTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRN-VHEGSVFSICVLKEG 503 (811)
Q Consensus 427 wd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~-~h~~~V~~l~~s~dg 503 (811)
.+++ +....... ...-.....+++++++. ++ +-...+.|..+|+........... ........|++. ++
T Consensus 148 ~~~d-G~~~~~~~------~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~ 219 (316)
T 1ijq_A 148 GGLN-GVDIYSLV------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-ED 219 (316)
T ss_dssp EETT-SCCEEEEE------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TT
T ss_pred EcCC-CCCeEEEE------ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CC
Confidence 7765 44332221 11123478999998755 44 556678999999875433333221 122346678875 46
Q ss_pred cEEEEecCCCcEEEEeCCCCCc
Q psy9770 504 SIISAGGKDGRLLQFDSNLQPT 525 (811)
Q Consensus 504 ~~l~s~s~dg~I~~wd~~~~~~ 525 (811)
.++++-...+.|..++..++..
T Consensus 220 ~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 220 KVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEEEEETTTTEEEEEETTTCCC
T ss_pred EEEEEECCCCeEEEEeCCCCcc
Confidence 6777677778899998765543
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.34 E-value=0.0018 Score=69.79 Aligned_cols=230 Identities=9% Similarity=0.001 Sum_probs=148.0
Q ss_pred CcEEEEeccEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEeec-cCCCCCCCCCeEEEEeCCCC----cEEEEec
Q psy9770 272 GEIVYFVAAVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQV-AGHDAREGKPHIRIWNSVSL----FTVSIIG 346 (811)
Q Consensus 272 g~~l~~~~~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~~-dg~~~~~~~~~I~iWd~~t~----~~~~~l~ 346 (811)
.-++++..+.|...++.+.....+......+..|+|++.+..|..... .+ .|+.+++... .....+.
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~--------~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQR--------MICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTT--------EEEEEEC------CCCEEEEC
T ss_pred ceeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCC--------eEEEEEcccCCCCCcceEEEe
Confidence 345555568999999998776666666778999999997666665543 34 8999998752 2333332
Q ss_pred cCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC--CCcE
Q psy9770 347 IGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG--KSHI 424 (811)
Q Consensus 347 ~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~--d~~i 424 (811)
........+++.+. ++.+.++ ....+.|.+.+++... ....+.........+++.|.++.++.+.. .+.|
T Consensus 156 --~~~~~p~glavD~~-~~~lY~~--d~~~~~I~~~~~~g~~---~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I 227 (400)
T 3p5b_L 156 --RDIQAPDGLAVDWI-HSNIYWT--DSVLGTVSVADTKGVK---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKI 227 (400)
T ss_dssp --SSCSCEEEEEEETT-TTEEEEE--ETTTTEEEEECTTTCS---EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCE
T ss_pred --CCCCCcccEEEEec-CCceEEE--ECCCCeEEEEeCCCCc---eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEE
Confidence 33456788999872 3444443 5667899999988665 33334444556899999998888888764 3677
Q ss_pred EEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeec-ccccceEEEEEec
Q psy9770 425 NFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRN-VHEGSVFSICVLK 501 (811)
Q Consensus 425 ~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~-~h~~~V~~l~~s~ 501 (811)
...+++ +....... ...-.....|++++++. ++ +-...+.|..+|+........+.. ..-....+|++.
T Consensus 228 ~~~~~d-G~~~~~~~------~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~- 299 (400)
T 3p5b_L 228 KKGGLN-GVDIYSLV------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF- 299 (400)
T ss_dssp EEEETT-SCSCEEEE------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-
T ss_pred EEEeCC-CCccEEEE------ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-
Confidence 777776 43332221 11123478999997655 44 555678899999876544333331 123445677774
Q ss_pred CCcEEEEecCCCcEEEEeCCCCCc
Q psy9770 502 EGSIISAGGKDGRLLQFDSNLQPT 525 (811)
Q Consensus 502 dg~~l~s~s~dg~I~~wd~~~~~~ 525 (811)
.+.++++-...+.|..+|..++..
T Consensus 300 ~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 300 EDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp TTEEEEEESSSCSEEEEESSSCCC
T ss_pred CCEEEEecCCCCeEEEEEcCCCCc
Confidence 455666666778888888655544
No 283
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.30 E-value=0.0013 Score=69.43 Aligned_cols=235 Identities=11% Similarity=-0.008 Sum_probs=141.7
Q ss_pred CCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCce
Q psy9770 299 TDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYN 378 (811)
Q Consensus 299 ~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~ 378 (811)
.+..+|.+..++. +|..+... .|+..++........+. . ...+..++|.+ .++.++.+ ....+.
T Consensus 33 ~d~~~C~~~~~~~-~ll~~~~~---------~I~~i~~~g~~~~~~~~--~-~~~~~~l~~d~-~~~~ly~~--D~~~~~ 96 (349)
T 3v64_C 33 PDRRSCKALGPEP-VLLFANRI---------DIRQVLPHRSEYTLLLN--N-LENAIALDFHH-RRELVFWS--DVTLDR 96 (349)
T ss_dssp TTSSCEEESSSCC-EEEEECBS---------CEEEECTTSCCEEEEEC--S-CSCEEEEEEET-TTTEEEEE--ETTTTE
T ss_pred CCCCcccccccCc-eeEeeccc---------ceEEEeCCCCeeEEeec--C-CCceEEEEEec-cccEEEEE--eccCCc
Confidence 3455677777754 44444433 58888887666554443 3 34588999997 24444444 567789
Q ss_pred EEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC-CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEE
Q psy9770 379 ISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG-KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAF 457 (811)
Q Consensus 379 i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~-d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~ 457 (811)
|..++..... ....+.........+++.+.++.++++.. .+.|.+.+++ +....... ...-.....+++
T Consensus 97 I~r~~~~g~~---~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~~~~l~------~~~l~~P~~iav 166 (349)
T 3v64_C 97 ILRANLNGSN---VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRKVLL------WQSLEKPRAIAL 166 (349)
T ss_dssp EEEEETTSCS---CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEE------CTTCSCEEEEEE
T ss_pred eEEEecCCCC---ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC-CCceEEEE------eCCCCCcceEEE
Confidence 9999988765 33333333345678899887788877766 5788888887 43322211 111234688999
Q ss_pred cCCCc-EE-EEcCC-CcEEEEecCCceEEEEeecccccceEEEEEecCCcE-EEEecCCCcEEEEeCCCCCccceeeecc
Q psy9770 458 TQGGE-VL-SGDSN-GNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSI-ISAGGKDGRLLQFDSNLQPTGYEAQIAE 533 (811)
Q Consensus 458 s~~g~-ll-sg~~d-g~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~-l~s~s~dg~I~~wd~~~~~~~~~~~~~~ 533 (811)
.|.+. ++ +-... +.|..+++........+. ..-.....|++++++.. .++-...+.|..+|++.... ...+..
T Consensus 167 dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~--~~~~~~ 243 (349)
T 3v64_C 167 HPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR--KAVISQ 243 (349)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTSCSCEESCC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEECS
T ss_pred ecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE-CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce--EEEEeC
Confidence 98544 44 54445 789999887543333222 23345789999975554 44445667899999875433 122222
Q ss_pred ccCCeEEEeeCCCCeEEE-EeCCCeEEEEEc
Q psy9770 534 HLGGIRTVSEGRGSQLIV-GTTRNCILVGSL 563 (811)
Q Consensus 534 ~~~~v~~l~~~~~~~l~~-~~~~~~i~~~d~ 563 (811)
.......+++.. +.++. -...+.|..++.
T Consensus 244 ~~~~P~giav~~-~~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 244 GLPHPFAITVFE-DSLYWTDWHTKSINSANK 273 (349)
T ss_dssp SCSSEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred CCCCceEEEEEC-CEEEEecCCCCeEEEEEc
Confidence 233455666643 34444 344567777663
No 284
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.29 E-value=0.00042 Score=68.85 Aligned_cols=209 Identities=12% Similarity=0.109 Sum_probs=139.3
Q ss_pred EEeccCCCCeEEEEEcCCCcEEE-EeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEE
Q psy9770 293 RHYLGHTDDIKCLSIHPNKLLIA-TGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAV 371 (811)
Q Consensus 293 ~~~~~h~~~V~~la~spdg~~La-sg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv 371 (811)
+.+.+-...+..++|+|++..|. +...++ .|...|.. ++.+..+.+.+. .....+++.+ +|.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~--------~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~--~g~~~vs- 86 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPA--------AIVEMTTN-GDLIRTIPLDFV-KDLETIEYIG--DNQFVIS- 86 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTE--------EEEEEETT-CCEEEEEECSSC-SSEEEEEECS--TTEEEEE-
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCC--------eEEEEeCC-CCEEEEEecCCC-CChHHeEEeC--CCEEEEE-
Confidence 34556667899999999866554 465555 89999998 999998876553 6688889987 7887665
Q ss_pred eCCCCceEEEEEcccCCCcceEEEee------eCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCc----eeeeecc-
Q psy9770 372 DEGNDYNISVWDWQKSDRGHKITETK------CSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGG----TLYKKQG- 440 (811)
Q Consensus 372 ~~s~d~~i~vWd~~~~~~~~~~~~~~------~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~----~~~~~~~- 440 (811)
...++.+.++++........+.... ..+.....++|.|.++.++++.......+|.++ +. .+.....
T Consensus 87 -~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~-g~~~~~~l~i~~~~ 164 (255)
T 3qqz_A 87 -DERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN-GLLSSNELHISKDK 164 (255)
T ss_dssp -ETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE-STTCSSCCEEEECH
T ss_pred -ECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc-ccccCCceeeecch
Confidence 4567889999987655211122222 123456899999998899998887777777776 21 1111100
Q ss_pred cccccCCCCceEEEEEEcCCCc--EEEEcCCCcEEEEecCCceEEEEeecc--c------ccceEEEEEecCCcEEEEec
Q psy9770 441 IFEMIRDKPKYVTCLAFTQGGE--VLSGDSNGNIIVWTRGSNTISKFIRNV--H------EGSVFSICVLKEGSIISAGG 510 (811)
Q Consensus 441 ~~~~l~~~~~~v~~l~~s~~g~--llsg~~dg~I~vwd~~~~~~~~~~~~~--h------~~~V~~l~~s~dg~~l~s~s 510 (811)
.+.. ......+.+++|.|... ++.......|.++|.. ++.+..+... . -.....|+|.++|++.+ .+
T Consensus 165 ~~~~-~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vs 241 (255)
T 3qqz_A 165 ALQR-QFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VS 241 (255)
T ss_dssp HHHH-TCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EE
T ss_pred hhcc-ccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-Ec
Confidence 0111 11223478999999755 4577788889999977 4455554411 1 12678999999998666 46
Q ss_pred CCCcEEEEe
Q psy9770 511 KDGRLLQFD 519 (811)
Q Consensus 511 ~dg~I~~wd 519 (811)
....++.+.
T Consensus 242 E~n~~y~f~ 250 (255)
T 3qqz_A 242 EPNRFYRFT 250 (255)
T ss_dssp TTTEEEEEE
T ss_pred CCceEEEEE
Confidence 666666654
No 285
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.28 E-value=0.00092 Score=71.68 Aligned_cols=235 Identities=11% Similarity=-0.004 Sum_probs=141.9
Q ss_pred CCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceE
Q psy9770 300 DDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNI 379 (811)
Q Consensus 300 ~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i 379 (811)
+.-.|.+..+++ +|..+... .|+..++.+......+. . ...+..++|.+ .++.++.+ ....+.|
T Consensus 77 d~~~C~~~~~~~-~l~~~~~~---------~I~~i~~~~~~~~~~~~--~-~~~~~gl~~d~-~~~~ly~~--D~~~~~I 140 (386)
T 3v65_B 77 DRRSCKALGPEP-VLLFANRI---------DIRQVLPHRSEYTLLLN--N-LENAIALDFHH-RRELVFWS--DVTLDRI 140 (386)
T ss_dssp TSSCEEECSSCC-EEEEECBS---------CEEEECTTSCCCEEEEC--S-CSCEEEEEEET-TTTEEEEE--ETTTTEE
T ss_pred CCCeECCccccc-eeEeecCc---------cceeeccCCCcEEEEec--C-CCccEEEEEec-CCCeEEEE--eCCCCcE
Confidence 344577776644 44444433 58889988766555443 2 34588999997 24444444 5677899
Q ss_pred EEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC-CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEc
Q psy9770 380 SVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG-KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFT 458 (811)
Q Consensus 380 ~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~-d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s 458 (811)
..++..... ....+.........+++.+.++.++++.. .+.|.+.+++ +....... .........+++.
T Consensus 141 ~r~~~~g~~---~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d-g~~~~~l~------~~~l~~P~giavd 210 (386)
T 3v65_B 141 LRANLNGSN---VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRKVLL------WQSLEKPRAIALH 210 (386)
T ss_dssp EEEETTSCC---EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT-SCSCEEEE------CSSCSCEEEEEEE
T ss_pred EEEecCCCC---cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC-CCceEEee------cCCCCCCcEEEEE
Confidence 999988765 33333333345577888887777777765 5678887776 33222211 1112346889999
Q ss_pred CCCc-EE-EEcCC-CcEEEEecCCceEEEEeecccccceEEEEEecCCc-EEEEecCCCcEEEEeCCCCCccceeeeccc
Q psy9770 459 QGGE-VL-SGDSN-GNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGS-IISAGGKDGRLLQFDSNLQPTGYEAQIAEH 534 (811)
Q Consensus 459 ~~g~-ll-sg~~d-g~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~-~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~ 534 (811)
|.+. ++ +-... +.|..+++.......... ..-.....|++++++. +.++-...+.|..+|++.... ...+...
T Consensus 211 p~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~--~~~~~~~ 287 (386)
T 3v65_B 211 PMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR--KAVISQG 287 (386)
T ss_dssp TTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC--EEEECSS
T ss_pred cCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE-CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee--EEEEECC
Confidence 8655 44 44444 789999887544333332 3344578999997554 445555667899999875433 2222223
Q ss_pred cCCeEEEeeCCCCeEEEEeCCCeEEEEEc
Q psy9770 535 LGGIRTVSEGRGSQLIVGTTRNCILVGSL 563 (811)
Q Consensus 535 ~~~v~~l~~~~~~~l~~~~~~~~i~~~d~ 563 (811)
......+++..+..+++-...+.|..++.
T Consensus 288 ~~~P~giav~~~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 288 LPHPFAITVFEDSLYWTDWHTKSINSANK 316 (386)
T ss_dssp CSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CCCceEEEEECCEEEEeeCCCCeEEEEEC
Confidence 34456666644434444445667777774
No 286
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.28 E-value=0.00065 Score=70.70 Aligned_cols=229 Identities=9% Similarity=-0.078 Sum_probs=136.5
Q ss_pred EEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEE-ECCCeEEEEeCCC----CcEEEEec-CCCCeEEEE
Q psy9770 550 IVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTA-GFDRIVQLWDSMS----HSVVWSKD-IAEQAQSAT 623 (811)
Q Consensus 550 ~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~-s~dg~v~iwd~~~----~~~~~~~~-~~~~v~~~~ 623 (811)
+..+..+.|+..++.......+......+.+++|++.+..|+.+ ...+.|..+++.. ........ .-..+..++
T Consensus 4 ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 83 (316)
T 1ijq_A 4 LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 83 (316)
T ss_dssp EEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred EEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEE
Confidence 33444567888888876444444445677899999876655544 4568999999876 22222222 224567899
Q ss_pred EcCCCCEEEEE-EeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecC--CcEEEEEecCCCcceeEEEEe
Q psy9770 624 FSPDGSIIIVG-CIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRD--NYIYVYEVSGDSRKYSRVGRC 700 (811)
Q Consensus 624 ~spdg~~la~g-~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~d--g~I~iwd~~~~~~~~~~~~~~ 700 (811)
+.+.+..|++. ...+.|.++|+........+.........+++.|++..|+.+... +.|+.++++... .+.+ .
T Consensus 84 vd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~--~~~~--~ 159 (316)
T 1ijq_A 84 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYSL--V 159 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--EEEE--E
T ss_pred EeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC--eEEE--E
Confidence 98766555554 457899999987554433343344567899999977766665543 577777765431 1111 1
Q ss_pred cCCCCCeeEEEeCCCCCeEEEe-cCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEe
Q psy9770 701 TGHSSFITHLDWSEDSMYIRSN-SGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCER 779 (811)
Q Consensus 701 ~~h~~~V~~l~~spdg~~L~s~-s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~ 779 (811)
...-.....|+|++++..|..+ ...+.|..+|++... ...+.. ..........|++
T Consensus 160 ~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~----------------------~~~~~~~P~giav 216 (316)
T 1ijq_A 160 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILE----------------------DEKRLAHPFSLAV 216 (316)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEE----------------------CTTTTSSEEEEEE
T ss_pred ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEee----------------------cCCccCCcEEEEE
Confidence 2233567899999877666554 456789999987421 111100 0001122445666
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCCCC
Q psy9770 780 SHDARVIATGDDFGKLKLYSYPAVQPK 806 (811)
Q Consensus 780 s~dg~~Las~~~dg~v~vw~~~~~~~~ 806 (811)
. .+.++++....+.|..++..+++..
T Consensus 217 ~-~~~ly~~d~~~~~V~~~~~~~g~~~ 242 (316)
T 1ijq_A 217 F-EDKVFWTDIINEAIFSANRLTGSDV 242 (316)
T ss_dssp E-TTEEEEEETTTTEEEEEETTTCCCC
T ss_pred E-CCEEEEEECCCCeEEEEeCCCCcce
Confidence 4 3555566666677777776666544
No 287
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.20 E-value=0.00016 Score=85.19 Aligned_cols=239 Identities=9% Similarity=0.039 Sum_probs=135.8
Q ss_pred cEEEEEec-CCCCCeEEEEC-CC----cEEEEEEcCC-ceeeeecccccccCCCCceEEEEEEcCCCc-EEEEcCC----
Q psy9770 402 TVVAAEFH-PLDRNNIVTCG-KS----HINFWTIDAG-GTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VLSGDSN---- 469 (811)
Q Consensus 402 ~V~~v~fs-p~~~~ll~~~~-d~----~i~iwd~~~~-~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-llsg~~d---- 469 (811)
.+...+|+ |+++.++.+.. +| .|+++|+.++ +.+.. .+. .....++|+|||+ ++....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~---~~~------~~~~~~~WspDg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD---KVS------GTNGEIVWGPDHTSLFYVTKDETLR 245 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC---CEE------EECSCCEECSSTTEEEEEEECTTCC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc---ccc------CceeeEEEecCCCEEEEEEECCCCC
Confidence 46678999 98888877654 22 4999999866 42211 111 1134688999997 4433333
Q ss_pred -CcEEEEecCCceE--EEEeecccccceEEEEEecCCcEEEEec---CCCcEEEEeCCCCCccc--eeeeccccCCeEEE
Q psy9770 470 -GNIIVWTRGSNTI--SKFIRNVHEGSVFSICVLKEGSIISAGG---KDGRLLQFDSNLQPTGY--EAQIAEHLGGIRTV 541 (811)
Q Consensus 470 -g~I~vwd~~~~~~--~~~~~~~h~~~V~~l~~s~dg~~l~s~s---~dg~I~~wd~~~~~~~~--~~~~~~~~~~v~~l 541 (811)
..|+++++.+++. ...+...+......+.|+|||++|+... ....|+++|+....... .............+
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~ 325 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV 325 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEE
Confidence 3688889887642 2222212334466889999999887654 23478888887653211 22223333444555
Q ss_pred eeCCCCeEEEEeCC-----CeEEEEEccC-Cceee-eeeccc--ceEEEEECCCCCeEEEEECCCe--EEEEeC------
Q psy9770 542 SEGRGSQLIVGTTR-----NCILVGSLNL-GFSPV-VLGHTD--ELWALAAHPSLSQFLTAGFDRI--VQLWDS------ 604 (811)
Q Consensus 542 ~~~~~~~l~~~~~~-----~~i~~~d~~~-~~~~~-~~~h~~--~v~~l~~sp~~~~l~s~s~dg~--v~iwd~------ 604 (811)
.+..++.++..+.. ..|+.+++.+ ..... +..+.. .+..+.+. .+.++++...++. |.++++
T Consensus 326 ~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~ 404 (751)
T 2xe4_A 326 QMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGV 404 (751)
T ss_dssp EEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSC
T ss_pred eeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEeccccccc
Confidence 54567777766544 2788888775 23233 344443 44556655 2345556666775 455565
Q ss_pred -CCCcEEEEecCCCCeEEEEE------cCCCCEEEEE-EeC---CeEEEEecCCcce
Q psy9770 605 -MSHSVVWSKDIAEQAQSATF------SPDGSIIIVG-CIA---GRWLVMDSETREA 650 (811)
Q Consensus 605 -~~~~~~~~~~~~~~v~~~~~------spdg~~la~g-~~d---g~i~i~d~~~~~~ 650 (811)
.+++....+........+.+ ++++..++.. +.. +.+..+|+.+++.
T Consensus 405 ~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 405 FKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp CCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred ccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 34431333444433333344 4566544433 322 4688888877653
No 288
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.19 E-value=4.5e-05 Score=89.82 Aligned_cols=157 Identities=7% Similarity=0.042 Sum_probs=98.2
Q ss_pred ceEEEEEC-CCCCeEEEEEC-C----CeEEEEeCCCC-cEEEEecCCCCeEEEEEcCCCCEEEEEEeC-----CeEEEEe
Q psy9770 577 ELWALAAH-PSLSQFLTAGF-D----RIVQLWDSMSH-SVVWSKDIAEQAQSATFSPDGSIIIVGCIA-----GRWLVMD 644 (811)
Q Consensus 577 ~v~~l~~s-p~~~~l~s~s~-d----g~v~iwd~~~~-~~~~~~~~~~~v~~~~~spdg~~la~g~~d-----g~i~i~d 644 (811)
.+...+|+ |||++|+.... + ..|+++|+.++ +.+.. ........++|+|||+.|+....+ ..|++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 57789999 99998886543 2 25999999988 63211 111123468899999998888765 3688888
Q ss_pred cCCcce--eEEec-CCCCCeEEEEEccCCCEEEEEec---CCcEEEEEecCCCcceeEEEEe-cCCCCCeeEEEeCCCCC
Q psy9770 645 SETREA--YSIHT-DGNEPIQVVKFSPDGKLLALGSR---DNYIYVYEVSGDSRKYSRVGRC-TGHSSFITHLDWSEDSM 717 (811)
Q Consensus 645 ~~~~~~--~~~~~-~~~~~i~~i~~spdg~~lasgs~---dg~I~iwd~~~~~~~~~~~~~~-~~h~~~V~~l~~spdg~ 717 (811)
+.++.. ...+. ........+.|||||++|+..+. ...|+++|+.++..... +..+ .+......++.|+.++.
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~-~~~l~~~~~~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNT-LEIVRPREKGVRYDVQMHGTSH 332 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCC-EEESSCCCTTCCEEEEEETTTE
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCce-eEEeecCCCCceEEEeeeeCCE
Confidence 877642 22322 22334678899999999987663 34588888877532220 0122 33345556666554444
Q ss_pred eEEEecCC----ceEEEEECCC
Q psy9770 718 YIRSNSGD----YELLYWNAGT 735 (811)
Q Consensus 718 ~L~s~s~D----g~i~iWd~~~ 735 (811)
+++....+ ..|..+++.+
T Consensus 333 l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEEECTTTCTTCEEEEEETTS
T ss_pred EEEEeCCCCCCCcEEEEEcCCC
Confidence 44444333 3677777764
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.18 E-value=0.00038 Score=75.80 Aligned_cols=238 Identities=10% Similarity=0.034 Sum_probs=138.9
Q ss_pred cEEEEEEecC-CCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCC---cEEEEE
Q psy9770 353 SISCLSFSKA-DGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKS---HINFWT 428 (811)
Q Consensus 353 ~V~~l~fs~~-~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~---~i~iwd 428 (811)
....|+|+|+ ++|.++++ ... +.|+.+|..++. +..+.........++|.+++. ++++...+ .-.++.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~--D~~-~~I~~id~~~g~----v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV--GQR-DAFRHVDFVNQY----VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE--CBT-SCEEEEETTTTE----EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEE
T ss_pred CCceEEEccccCCCEEEEE--eCC-CCEEEEECCCCE----EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEE
Confidence 4568899983 24666665 222 899999998775 555555556789999999877 77776532 111222
Q ss_pred EcC-CceeeeecccccccCCCCceEEEEEEcC-CCcEE-EEcCCCcEEEEecCCceEE-EEeecccccceEEEEEecCCc
Q psy9770 429 IDA-GGTLYKKQGIFEMIRDKPKYVTCLAFTQ-GGEVL-SGDSNGNIIVWTRGSNTIS-KFIRNVHEGSVFSICVLKEGS 504 (811)
Q Consensus 429 ~~~-~~~~~~~~~~~~~l~~~~~~v~~l~~s~-~g~ll-sg~~dg~I~vwd~~~~~~~-~~~~~~h~~~V~~l~~s~dg~ 504 (811)
+.. +..... ..+.. ......+++.+ +|.++ +-..++.|+.++..++... ..+.......-..|+|+|+|+
T Consensus 212 ~~~~~~~~~~--~~~~~----~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~ 285 (433)
T 4hw6_A 212 FTRASGFTER--LSLCN----ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGD 285 (433)
T ss_dssp ECGGGTTCCE--EEEEE----CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSS
T ss_pred EECCCCeecc--ccccc----cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCC
Confidence 221 111100 00001 12245688898 77766 4446788999999877662 332212223345799999998
Q ss_pred -EEEEecCCCcEEEEeCCC--CCccceeeecc---------------ccCCeEEEee---------CCCCeEEEEeC-CC
Q psy9770 505 -IISAGGKDGRLLQFDSNL--QPTGYEAQIAE---------------HLGGIRTVSE---------GRGSQLIVGTT-RN 556 (811)
Q Consensus 505 -~l~s~s~dg~I~~wd~~~--~~~~~~~~~~~---------------~~~~v~~l~~---------~~~~~l~~~~~-~~ 556 (811)
+.++-...+.|+.++.+. ........+.+ .......+++ ..++.++++.. .+
T Consensus 286 ~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~ 365 (433)
T 4hw6_A 286 WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSH 365 (433)
T ss_dssp EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTT
T ss_pred EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCC
Confidence 445555678899987652 22211111111 1223556777 77778877754 45
Q ss_pred eEEEEEccCCceeeeeec------------------ccceEEEEEC-CCCCeEEEEECCCeEEEEeCC
Q psy9770 557 CILVGSLNLGFSPVVLGH------------------TDELWALAAH-PSLSQFLTAGFDRIVQLWDSM 605 (811)
Q Consensus 557 ~i~~~d~~~~~~~~~~~h------------------~~~v~~l~~s-p~~~~l~s~s~dg~v~iwd~~ 605 (811)
.|+.++... ....+.+. -....+|++. +++.++++-...+.|+.++++
T Consensus 366 ~I~~~~~~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 366 TVRVLTPEG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEECTTS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEECCCC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 888887533 22222221 1236788888 566665555566777777653
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.16 E-value=0.00098 Score=71.83 Aligned_cols=231 Identities=9% Similarity=-0.084 Sum_probs=141.8
Q ss_pred EEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEE-ECCCeEEEEeCCCCc----EEEEec-CCCCeEEE
Q psy9770 549 LIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTA-GFDRIVQLWDSMSHS----VVWSKD-IAEQAQSA 622 (811)
Q Consensus 549 l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~-s~dg~v~iwd~~~~~----~~~~~~-~~~~v~~~ 622 (811)
++..+....|+..++.......+......+.+++|++....|+.. ...+.|+.+++.... ...... .......+
T Consensus 85 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 164 (400)
T 3p5b_L 85 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 164 (400)
T ss_dssp EEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEE
T ss_pred eeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccE
Confidence 444455678899998877555555566788899999866655554 456889999987521 222222 33567899
Q ss_pred EEcCCCCEEEEE-EeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEec--CCcEEEEEecCCCcceeEEEE
Q psy9770 623 TFSPDGSIIIVG-CIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSR--DNYIYVYEVSGDSRKYSRVGR 699 (811)
Q Consensus 623 ~~spdg~~la~g-~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~--dg~I~iwd~~~~~~~~~~~~~ 699 (811)
++.+.+..|+.. ...+.|.+.++........+.........|++.|.+.+|+.... .+.|+..+++.... ..+
T Consensus 165 avD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~--~~~-- 240 (400)
T 3p5b_L 165 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSL-- 240 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC--EEE--
T ss_pred EEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc--EEE--
Confidence 999855555544 45679999998866554445444456789999997777766553 36788877765321 111
Q ss_pred ecCCCCCeeEEEeCCCCCeEEEe-cCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEE
Q psy9770 700 CTGHSSFITHLDWSEDSMYIRSN-SGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCE 778 (811)
Q Consensus 700 ~~~h~~~V~~l~~spdg~~L~s~-s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~ 778 (811)
....-.....|++++++..|..+ .....|..+|++.... ..+.. ....-....+|+
T Consensus 241 ~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~----------------------~~~~l~~P~gl~ 297 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILE----------------------DEKRLAHPFSLA 297 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEE----------------------CSSTTSSEEEEE
T ss_pred EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEe----------------------CCCCCCCCEEEE
Confidence 22233567899999877776655 4467899999864321 11100 000111234555
Q ss_pred ecCCCCEEEEEcCCCcEEEEeCCCCCCCC
Q psy9770 779 RSHDARVIATGDDFGKLKLYSYPAVQPKL 807 (811)
Q Consensus 779 ~s~dg~~Las~~~dg~v~vw~~~~~~~~~ 807 (811)
+. .+.++++....+.|..++..+|+...
T Consensus 298 v~-~~~lywtd~~~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 298 VF-EDKVFWTDIINEAIFSANRLTGSDVN 325 (400)
T ss_dssp EE-TTEEEEEESSSCSEEEEESSSCCCCE
T ss_pred Ee-CCEEEEecCCCCeEEEEEcCCCCceE
Confidence 52 34455565666778888766666543
No 291
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.09 E-value=0.0018 Score=67.21 Aligned_cols=228 Identities=11% Similarity=0.010 Sum_probs=142.8
Q ss_pred cEEEEeccEEEEEeCCCCc--eEEeccCCCCeEEEEEcCCCcEEEEee-ccCCCCCCCCCeEEEEeCCCCcEE-EEeccC
Q psy9770 273 EIVYFVAAVAVLYNVEEQT--QRHYLGHTDDIKCLSIHPNKLLIATGQ-VAGHDAREGKPHIRIWNSVSLFTV-SIIGIG 348 (811)
Q Consensus 273 ~~l~~~~~~i~i~d~~~~~--~~~~~~h~~~V~~la~spdg~~Lasg~-~dg~~~~~~~~~I~iWd~~t~~~~-~~l~~~ 348 (811)
-++++..+.|...++++.. ...+......+..++|++.+..|.... ..+ .|..++..+.... ..+.
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~--------~I~r~~~~g~~~~~~~~~-- 75 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEE--------AIKRTEFNKTESVQNVVV-- 75 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTT--------EEEEEETTSSSCCCEEEE--
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCC--------cEEEEEccCCCceEEEEc--
Confidence 3555556889999998763 233333334677899998655555444 334 8999998876321 1121
Q ss_pred CccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC--CCcEEE
Q psy9770 349 EFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG--KSHINF 426 (811)
Q Consensus 349 ~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~--d~~i~i 426 (811)
..-.....+++.+ .++.+..+ ....+.|.+++..... ....+.........+++.|.++.++.+.. .+.|..
T Consensus 76 ~~l~~p~glavd~-~~g~ly~~--d~~~~~I~~~~~dG~~---~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r 149 (318)
T 3sov_A 76 SGLLSPDGLACDW-LGEKLYWT--DSETNRIEVSNLDGSL---RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIER 149 (318)
T ss_dssp ECCSCCCEEEEET-TTTEEEEE--ETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEE
T ss_pred CCCCCccEEEEEc-CCCeEEEE--ECCCCEEEEEECCCCc---EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEE
Confidence 1124566888887 24455444 4667899999987654 22223344456789999998888888763 466777
Q ss_pred EEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCc
Q psy9770 427 WTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGS 504 (811)
Q Consensus 427 wd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~ 504 (811)
.+++ +....... ...-...+.+++++++. ++ +=...+.|..+|+........+. ........+++.. +.
T Consensus 150 ~~~d-G~~~~~~~------~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~P~glav~~-~~ 220 (318)
T 3sov_A 150 AGMD-GSSRFIII------NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFE-DI 220 (318)
T ss_dssp EETT-SCSCEEEE------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SCCSCEEEEEEET-TE
T ss_pred EEcC-CCCeEEEE------ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec-CCCCCceEEEEeC-CE
Confidence 7766 43322221 11123468999998655 44 65667889999987544333332 3445567788764 45
Q ss_pred EEEEecCCCcEEEEeCCCCCc
Q psy9770 505 IISAGGKDGRLLQFDSNLQPT 525 (811)
Q Consensus 505 ~l~s~s~dg~I~~wd~~~~~~ 525 (811)
++.+-...+.|..++..++..
T Consensus 221 lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 221 LYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EEEEETTTTEEEEEETTTCCS
T ss_pred EEEEecCCCeEEEEECCCCCc
Confidence 666666778899998865554
No 292
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.08 E-value=0.00058 Score=74.36 Aligned_cols=235 Identities=9% Similarity=0.048 Sum_probs=137.9
Q ss_pred ceEEEEEec-CCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCe-EEEEeCC-----CeEEEEEccC
Q psy9770 493 SVFSICVLK-EGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQ-LIVGTTR-----NCILVGSLNL 565 (811)
Q Consensus 493 ~V~~l~~s~-dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-l~~~~~~-----~~i~~~d~~~ 565 (811)
....|+++| ++..|+.+...+.|+.+|++.... ..+.........+++++++. ++++... ..+.+++...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v---~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV---STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE---EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE---EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 456788997 344455455448899999877654 22223455678899988876 6666542 1355555544
Q ss_pred Cce--eeeeecccceEEEEECC-CCCeEEEEECCCeEEEEeCCCCcEEEEe--cCCCCeEEEEEcCCCCEEEEEE-eCCe
Q psy9770 566 GFS--PVVLGHTDELWALAAHP-SLSQFLTAGFDRIVQLWDSMSHSVVWSK--DIAEQAQSATFSPDGSIIIVGC-IAGR 639 (811)
Q Consensus 566 ~~~--~~~~~h~~~v~~l~~sp-~~~~l~s~s~dg~v~iwd~~~~~~~~~~--~~~~~v~~~~~spdg~~la~g~-~dg~ 639 (811)
... ..+. ......+++++| ++.++++-..++.|..++...+...... ........++|+|+|++|++.. ..+.
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 332 2222 234567889999 6666666667789999999877653222 2234578999999999665554 5678
Q ss_pred EEEEecCC--cce--eEEecCC---------------CCCeE-EEEEc--------cCCCEEEEEecCCcEEEEEecCCC
Q psy9770 640 WLVMDSET--REA--YSIHTDG---------------NEPIQ-VVKFS--------PDGKLLALGSRDNYIYVYEVSGDS 691 (811)
Q Consensus 640 i~i~d~~~--~~~--~~~~~~~---------------~~~i~-~i~~s--------pdg~~lasgs~dg~I~iwd~~~~~ 691 (811)
|..++... ++. +..+.+. -..-. .++.. ++|.++++-...+.|+.++. ++
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G- 371 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QG- 371 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TS-
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CC-
Confidence 99987653 221 1111111 01112 34443 34555555455667887772 22
Q ss_pred cceeEEEEe-----cC----------CCCCeeEEEeCCC-CCeEEEecCCceEEEEECC
Q psy9770 692 RKYSRVGRC-----TG----------HSSFITHLDWSED-SMYIRSNSGDYELLYWNAG 734 (811)
Q Consensus 692 ~~~~~~~~~-----~~----------h~~~V~~l~~spd-g~~L~s~s~Dg~i~iWd~~ 734 (811)
. ...+.-. .+ .-.....|+++|+ +.++++-.....|+.++++
T Consensus 372 ~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 372 R-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp E-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred c-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 1 1111111 11 0125788999984 6666665566778877754
No 293
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.04 E-value=0.0021 Score=63.77 Aligned_cols=207 Identities=11% Similarity=0.058 Sum_probs=131.6
Q ss_pred cCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeee-CCCcEEEEEecCCCCCeEEEEC-CCcE
Q psy9770 347 IGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKC-SVDTVVAAEFHPLDRNNIVTCG-KSHI 424 (811)
Q Consensus 347 ~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~-~~~~V~~v~fsp~~~~ll~~~~-d~~i 424 (811)
+.+-...+..++|+| ++..|+++ ...++.|...|.+ ++ .+..+.- .......+++.+++. ++++.. ++.+
T Consensus 22 l~g~~~~lSGla~~~--~~~~L~aV-~d~~~~I~~ld~~-g~---v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l 93 (255)
T 3qqz_A 22 IAGITNNISSLTWSA--QSNTLFST-INKPAAIVEMTTN-GD---LIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYAI 93 (255)
T ss_dssp CTTCCSCEEEEEEET--TTTEEEEE-EETTEEEEEEETT-CC---EEEEEECSSCSSEEEEEECSTTE-EEEEETTTTEE
T ss_pred CCCcccCcceeEEeC--CCCEEEEE-ECCCCeEEEEeCC-CC---EEEEEecCCCCChHHeEEeCCCE-EEEEECCCCcE
Confidence 336667899999999 45555544 3458999999998 66 6666543 235788899987554 545544 6789
Q ss_pred EEEEEcCCceee--eecc-cccccCCCCceEEEEEEcCCCc-EEEEcCCCcEEEEecCC---ceEEEEee------cccc
Q psy9770 425 NFWTIDAGGTLY--KKQG-IFEMIRDKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGS---NTISKFIR------NVHE 491 (811)
Q Consensus 425 ~iwd~~~~~~~~--~~~~-~~~~l~~~~~~v~~l~~s~~g~-llsg~~dg~I~vwd~~~---~~~~~~~~------~~h~ 491 (811)
.++++.....+. .... .+.. .........++|.|.+. ++++.......+|.... ......+. ..+.
T Consensus 94 ~~~~v~~~~~i~~~~~~~~~~~~-~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~ 172 (255)
T 3qqz_A 94 YVISLTPNSEVKILKKIKIPLQE-SPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTL 172 (255)
T ss_dssp EEEEECTTCCEEEEEEEECCCSS-CCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCS
T ss_pred EEEEcCCCCeeeeeeeecccccc-ccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccccc
Confidence 999987655322 1111 1111 23345689999999985 55555554444444431 11122221 1233
Q ss_pred cceEEEEEecC-CcEEEEecCCCcEEEEeCCCCCccceeeecc-c------cCCeEEEeeCCCCeEEEEeCCCeEEEEEc
Q psy9770 492 GSVFSICVLKE-GSIISAGGKDGRLLQFDSNLQPTGYEAQIAE-H------LGGIRTVSEGRGSQLIVGTTRNCILVGSL 563 (811)
Q Consensus 492 ~~V~~l~~s~d-g~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~-~------~~~v~~l~~~~~~~l~~~~~~~~i~~~d~ 563 (811)
..+.++++.|. +++++.....+.|..+|.+.... ....+.. . ......+++.+++.+++.+..+.++++.-
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~-~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVI-GEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP 251 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEE-EEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC
T ss_pred CCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEE-EEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEe
Confidence 46789999985 55666677778899999876533 3344442 1 23567889999999999988887777653
No 294
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.04 E-value=0.0016 Score=67.73 Aligned_cols=202 Identities=9% Similarity=-0.021 Sum_probs=127.9
Q ss_pred cceEEccCCcEEEEec---cEEEEEeCCCCc--eEEeccCCCCeEEEEEcCCCcEE-EEeeccCCCCCCCCCeEEEEeCC
Q psy9770 264 SNLYLLPTGEIVYFVA---AVAVLYNVEEQT--QRHYLGHTDDIKCLSIHPNKLLI-ATGQVAGHDAREGKPHIRIWNSV 337 (811)
Q Consensus 264 ~~l~~spdg~~l~~~~---~~i~i~d~~~~~--~~~~~~h~~~V~~la~spdg~~L-asg~~dg~~~~~~~~~I~iWd~~ 337 (811)
..|+|.+.+..||.++ +.|..+++.+.. ...+...-.....+++.+.+..| .+-...+ .|.+++..
T Consensus 38 ~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~--------~I~~~~~d 109 (318)
T 3sov_A 38 AAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETN--------RIEVSNLD 109 (318)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTT--------EEEEEETT
T ss_pred EEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCC--------EEEEEECC
Confidence 4678888777788774 689999998763 23333334567789999855444 4433344 89999987
Q ss_pred CCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEE
Q psy9770 338 SLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIV 417 (811)
Q Consensus 338 t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~ 417 (811)
.......+. ........+++.| .+.+|+..+.+..+.|...+..... ....+...-.....++|+++++.+++
T Consensus 110 G~~~~~l~~--~~~~~P~giavdp--~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~l~~Pnglavd~~~~~lY~ 182 (318)
T 3sov_A 110 GSLRKVLFW--QELDQPRAIALDP--SSGFMYWTDWGEVPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYW 182 (318)
T ss_dssp SCSCEEEEC--SSCSSEEEEEEEG--GGTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCcEEEEEe--CCCCCccEEEEeC--CCCEEEEEecCCCCEEEEEEcCCCC---eEEEEECCCCCccEEEEeccCCEEEE
Confidence 654333332 3345678999998 4444443332346788888876543 22222233346789999998888888
Q ss_pred EEC-CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEee
Q psy9770 418 TCG-KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIR 487 (811)
Q Consensus 418 ~~~-d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~ 487 (811)
+-. .+.|..++++ +....... .+.......+++..++-+++-...+.|..++..+++....+.
T Consensus 183 aD~~~~~I~~~d~d-G~~~~~~~------~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 183 ADAKLNFIHKSNLD-GTNRQAVV------KGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EETTTTEEEEEETT-SCSCEEEE------CSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EECCCCEEEEEcCC-CCceEEEe------cCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 876 5789999887 43332221 111223566777544335577777889999987776555544
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.03 E-value=0.0012 Score=69.66 Aligned_cols=222 Identities=18% Similarity=0.167 Sum_probs=126.9
Q ss_pred EEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEE--ee--cccccceEEEEEecC----CcEEEEecCC-----CcEEEE
Q psy9770 452 VTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKF--IR--NVHEGSVFSICVLKE----GSIISAGGKD-----GRLLQF 518 (811)
Q Consensus 452 v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~--~~--~~h~~~V~~l~~s~d----g~~l~s~s~d-----g~I~~w 518 (811)
...++|.|+|.++++..+|.|++++ .++.... +. .........|+++|+ +.+.++-... +.|..|
T Consensus 33 P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 33 PWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred ceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 6799999999988878889999998 3432211 11 012457889999998 4444433322 678888
Q ss_pred eCCCCCccc----eeeec---cccCCeEEEeeCCCCeEEEEeCC--------------CeEEEEEccCC-----------
Q psy9770 519 DSNLQPTGY----EAQIA---EHLGGIRTVSEGRGSQLIVGTTR--------------NCILVGSLNLG----------- 566 (811)
Q Consensus 519 d~~~~~~~~----~~~~~---~~~~~v~~l~~~~~~~l~~~~~~--------------~~i~~~d~~~~----------- 566 (811)
+........ ...++ ........+++.+++.++++..+ +.|..++.+..
T Consensus 111 ~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~ 190 (352)
T 2ism_A 111 RHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRR 190 (352)
T ss_dssp EECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCT
T ss_pred EeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCC
Confidence 876432211 11122 11123357889999999887532 57777776641
Q ss_pred --ceee-eeecccceEEEEECC-CCCeEEEEECCCe--------EEEEeCCC----------------CcEEEEecCCCC
Q psy9770 567 --FSPV-VLGHTDELWALAAHP-SLSQFLTAGFDRI--------VQLWDSMS----------------HSVVWSKDIAEQ 618 (811)
Q Consensus 567 --~~~~-~~~h~~~v~~l~~sp-~~~~l~s~s~dg~--------v~iwd~~~----------------~~~~~~~~~~~~ 618 (811)
.... ..++ .....++|+| ++.++++-...+. |.+..... ..++........
T Consensus 191 ~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~a 269 (352)
T 2ism_A 191 GARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFP 269 (352)
T ss_dssp TSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCC
T ss_pred CCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCC
Confidence 1112 2233 3456889999 5665555433332 33322111 011222222334
Q ss_pred eEEEEEcCCCCEEEEEEeCCeEEEEecCCcce------eEEecCCCCCeEEEEEccCCCEEEEEe
Q psy9770 619 AQSATFSPDGSIIIVGCIAGRWLVMDSETREA------YSIHTDGNEPIQVVKFSPDGKLLALGS 677 (811)
Q Consensus 619 v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~------~~~~~~~~~~i~~i~~spdg~~lasgs 677 (811)
...++| .+|.++++....+.|..+++..... ...+-.....+..+++.|||.++++..
T Consensus 270 p~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 270 PGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 567777 5676666555567788887764431 112212235788999999997766653
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.98 E-value=0.009 Score=69.78 Aligned_cols=229 Identities=8% Similarity=-0.018 Sum_probs=143.1
Q ss_pred cEEEEeccEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEee-ccCCCCCCCCCeEEEEeCCCC----cEEEEecc
Q psy9770 273 EIVYFVAAVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQ-VAGHDAREGKPHIRIWNSVSL----FTVSIIGI 347 (811)
Q Consensus 273 ~~l~~~~~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~-~dg~~~~~~~~~I~iWd~~t~----~~~~~l~~ 347 (811)
.++++....|+..++.......+......+..|+|++....|.... ..+ .|+.+++... .....+.
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~--------~I~~~~l~g~~~~~~~~~vi~- 467 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQR--------MICSTQLDRAHGVSSYDTVIS- 467 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTT--------EEEEEEC--------CEEEEC-
T ss_pred ccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccce--------eEEEEeccCCCCCcceeEEEe-
Confidence 3444445778888888776656656667889999999655555444 334 8999998753 2233332
Q ss_pred CCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC-C-CcEE
Q psy9770 348 GEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG-K-SHIN 425 (811)
Q Consensus 348 ~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~-d-~~i~ 425 (811)
........|++.+ .+..|+.. ....+.|.+.++.... ....+.........|++.|.++.|+++.. . +.|.
T Consensus 468 -~~l~~P~GLAvD~--~~~~LY~t-D~~~~~I~v~~ldG~~---~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~ 540 (791)
T 3m0c_C 468 -RDIQAPDGLAVDW--IHSNIYWT-DSVLGTVSVADTKGVK---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIK 540 (791)
T ss_dssp -SSCSCCCEEEEET--TTTEEEEE-ETTTTEEEEEETTSSS---EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred -cCCCCcceeeeee--cCCcEEEE-ecCCCeEEEEeCCCCe---EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEE
Confidence 3345667899987 45444433 5778899999998655 33333344556899999998888888864 3 6677
Q ss_pred EEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeec-ccccceEEEEEecC
Q psy9770 426 FWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRN-VHEGSVFSICVLKE 502 (811)
Q Consensus 426 iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~-~h~~~V~~l~~s~d 502 (811)
..+++ |.....+. ...-.....|++.+.+. |+ +=...+.|..+++........+.. ..-....+|++..
T Consensus 541 ~~~~d-G~~~~~lv------~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~- 612 (791)
T 3m0c_C 541 KGGLN-GVDIYSLV------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE- 612 (791)
T ss_dssp EEETT-SCCEEEEE------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-
T ss_pred EEecC-CCceEEEE------eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-
Confidence 77776 44333221 11123478899996554 54 545567899999876544444431 1223455677643
Q ss_pred CcEEEEecCCCcEEEEeCCCCCc
Q psy9770 503 GSIISAGGKDGRLLQFDSNLQPT 525 (811)
Q Consensus 503 g~~l~s~s~dg~I~~wd~~~~~~ 525 (811)
+.++++-...+.|...|..++..
T Consensus 613 ~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 613 DKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp TEEEEEETTTTEEEEEETTTCCC
T ss_pred CEEEEEECCCCEEEEEeCCCCcc
Confidence 35555556667888887655543
No 297
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.90 E-value=0.013 Score=61.80 Aligned_cols=228 Identities=13% Similarity=0.073 Sum_probs=130.4
Q ss_pred cceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeee---ccccCCeEEEeeCCC----CeEEEEeCC--------C
Q psy9770 492 GSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQI---AEHLGGIRTVSEGRG----SQLIVGTTR--------N 556 (811)
Q Consensus 492 ~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~---~~~~~~v~~l~~~~~----~~l~~~~~~--------~ 556 (811)
.....|+|.|+|++++ +..+|.|++++... . .....+ .........+++.|+ +.++++... +
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d~~G-~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLISPSG-K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEECSSC-E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEeCCC-c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 4567899999998776 56679999997432 2 111211 122345788898886 777776543 6
Q ss_pred eEEEEEccCC------ceeeee----ecccceEEEEECCCCCeEEEEEC-------------CCeEEEEeCCCC------
Q psy9770 557 CILVGSLNLG------FSPVVL----GHTDELWALAAHPSLSQFLTAGF-------------DRIVQLWDSMSH------ 607 (811)
Q Consensus 557 ~i~~~d~~~~------~~~~~~----~h~~~v~~l~~sp~~~~l~s~s~-------------dg~v~iwd~~~~------ 607 (811)
.|..++.... ....+. ........|+|.|+|.++++.+. .|.|.-++....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 7888887654 111111 11113457999999987776543 245655555432
Q ss_pred ---cEEEEecCCCCeEEEEEcC-CCCEEEEEEeCC---eEEEEecCC--------c--------ceeEEecCCCCCeEEE
Q psy9770 608 ---SVVWSKDIAEQAQSATFSP-DGSIIIVGCIAG---RWLVMDSET--------R--------EAYSIHTDGNEPIQVV 664 (811)
Q Consensus 608 ---~~~~~~~~~~~v~~~~~sp-dg~~la~g~~dg---~i~i~d~~~--------~--------~~~~~~~~~~~~i~~i 664 (811)
..+....+ .....++|+| +|.++++-...+ .|.+...-. + ..+..+.........+
T Consensus 186 f~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~ 264 (354)
T 3a9g_A 186 FPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA 264 (354)
T ss_dssp STTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred CCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence 12333332 2356799999 566544432221 244332110 0 1222221123457788
Q ss_pred EEc-------cCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEec
Q psy9770 665 KFS-------PDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNS 723 (811)
Q Consensus 665 ~~s-------pdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s 723 (811)
+|. .+|.++++.-..+.|...++............+.+....+..+++.|||.++++..
T Consensus 265 ~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 883 57777777666778888888754222111112333346789999999998776654
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.88 E-value=0.0066 Score=63.99 Aligned_cols=225 Identities=16% Similarity=0.066 Sum_probs=130.9
Q ss_pred eEEEEEEcCCCcEEEEcCCCcEEEEecCCce-EEEEee--cccccceEEEEEecC----CcEEEEecC---C----CcEE
Q psy9770 451 YVTCLAFTQGGEVLSGDSNGNIIVWTRGSNT-ISKFIR--NVHEGSVFSICVLKE----GSIISAGGK---D----GRLL 516 (811)
Q Consensus 451 ~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~-~~~~~~--~~h~~~V~~l~~s~d----g~~l~s~s~---d----g~I~ 516 (811)
....++|.|+|.++++..+|.|++++. +++ .+..+. .........|+++|+ +.+.++-.. + ..|.
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 368899999999888888899999974 444 111111 012356889999997 544443332 3 5677
Q ss_pred EEeCCCC--Cccce----eeecc-ccCCeEEEeeCCCCeEEEEeCC--------------CeEEEEEccCCc--------
Q psy9770 517 QFDSNLQ--PTGYE----AQIAE-HLGGIRTVSEGRGSQLIVGTTR--------------NCILVGSLNLGF-------- 567 (811)
Q Consensus 517 ~wd~~~~--~~~~~----~~~~~-~~~~v~~l~~~~~~~l~~~~~~--------------~~i~~~d~~~~~-------- 567 (811)
.|+.... ..... ..++. .......+++.+++.|+++..+ +.|..++.+...
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~ 188 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPN 188 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTT
T ss_pred EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCC
Confidence 7876544 11001 11221 1122456889999998887532 567777765431
Q ss_pred -eeeeeecccceEEEEECC-CCCeEEEEECCC---eEEEEeCCC--------C--------cEEEEe-cCCCCeEEEEEc
Q psy9770 568 -SPVVLGHTDELWALAAHP-SLSQFLTAGFDR---IVQLWDSMS--------H--------SVVWSK-DIAEQAQSATFS 625 (811)
Q Consensus 568 -~~~~~~h~~~v~~l~~sp-~~~~l~s~s~dg---~v~iwd~~~--------~--------~~~~~~-~~~~~v~~~~~s 625 (811)
.....+|. ....++|+| ++.++++-...+ .|.+..... + .++... .....+..++|.
T Consensus 189 ~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y 267 (354)
T 3a9g_A 189 SPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFV 267 (354)
T ss_dssp CCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEEC
T ss_pred CcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEE
Confidence 12223333 456899999 566555433221 233332110 0 122222 223457788883
Q ss_pred -------CCCCEEEEEEeCCeEEEEecCCc-cee--EE-ecCCCCCeEEEEEccCCCEEEEEe
Q psy9770 626 -------PDGSIIIVGCIAGRWLVMDSETR-EAY--SI-HTDGNEPIQVVKFSPDGKLLALGS 677 (811)
Q Consensus 626 -------pdg~~la~g~~dg~i~i~d~~~~-~~~--~~-~~~~~~~i~~i~~spdg~~lasgs 677 (811)
.+|.++++....+.|..+++... +.. .. +.+....+..+++.|||.++++..
T Consensus 268 ~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 268 HGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 56777766666778999988753 322 22 233345789999999997666653
No 299
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.87 E-value=0.0029 Score=69.11 Aligned_cols=267 Identities=11% Similarity=0.005 Sum_probs=144.9
Q ss_pred CeEEEeeCC--CCeEEEEeC-CCeEEEEEccCCceeeeeec----ccceEEEEE-------CCCCCeEEEEECCC-----
Q psy9770 537 GIRTVSEGR--GSQLIVGTT-RNCILVGSLNLGFSPVVLGH----TDELWALAA-------HPSLSQFLTAGFDR----- 597 (811)
Q Consensus 537 ~v~~l~~~~--~~~l~~~~~-~~~i~~~d~~~~~~~~~~~h----~~~v~~l~~-------sp~~~~l~s~s~dg----- 597 (811)
....|++.| .+.|+++.. .+.|++.|+..+....+..- ......++| ++++..|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 356778886 366666654 36788899888766554432 235889999 99999666666543
Q ss_pred --eEEEEeCCC-CcEE-----EEecCCCCeEEEEEcCC-CCEEEEEEeCCeEEEEecC-------Ccce-----------
Q psy9770 598 --IVQLWDSMS-HSVV-----WSKDIAEQAQSATFSPD-GSIIIVGCIAGRWLVMDSE-------TREA----------- 650 (811)
Q Consensus 598 --~v~iwd~~~-~~~~-----~~~~~~~~v~~~~~spd-g~~la~g~~dg~i~i~d~~-------~~~~----------- 650 (811)
.|.+++... +... ..+..-.....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 266665333 1221 11111224567889995 4445555577889999987 4543
Q ss_pred eEE-ec-CCCCCeEEEEEccCCCEEEEEe-cCCcEEEEEecCCCcce---eEEEEe---cCCC---------CCee-EEE
Q psy9770 651 YSI-HT-DGNEPIQVVKFSPDGKLLALGS-RDNYIYVYEVSGDSRKY---SRVGRC---TGHS---------SFIT-HLD 711 (811)
Q Consensus 651 ~~~-~~-~~~~~i~~i~~spdg~~lasgs-~dg~I~iwd~~~~~~~~---~~~~~~---~~h~---------~~V~-~l~ 711 (811)
... +. +....-..|+|+|+|++|+.+. ..+.|+.++.......+ ..+.-. .+.. .... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 111 11 2234457899999999655554 55678887765432111 111111 1111 1233 344
Q ss_pred eC-------CCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEecCC-C
Q psy9770 712 WS-------EDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHD-A 783 (811)
Q Consensus 712 ~s-------pdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~d-g 783 (811)
.. +++.++++=.....|+.++ .+|. +..+...............++. .+.-...+.-.....|++.++ |
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~-dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTD-DGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCC-CEETTTTCCCSSEEEEEEETTTT
T ss_pred EccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccC-CCCchhhhhcCCCcEEEEECCCC
Confidence 43 4555666656667788877 3443 2211100000000000000000 010011112344678999997 7
Q ss_pred CEEEEEcCCCcEEEEeCCCCCCC
Q psy9770 784 RVIATGDDFGKLKLYSYPAVQPK 806 (811)
Q Consensus 784 ~~Las~~~dg~v~vw~~~~~~~~ 806 (811)
.++++=..+..|+.++++.....
T Consensus 457 ~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp EEEEEETTTTEEEEEEECCCC--
T ss_pred EEEEEeCCCCEEEEEECCCCccc
Confidence 77777677789999998775543
No 300
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.84 E-value=0.034 Score=56.17 Aligned_cols=270 Identities=12% Similarity=0.110 Sum_probs=160.9
Q ss_pred eEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEec
Q psy9770 330 HIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFH 409 (811)
Q Consensus 330 ~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fs 409 (811)
.|.|.|+..+..+.+..+.+ + +.-.+| ..+.||. -...++.|+|+++.+ ++....-. ..|.--.|-
T Consensus 50 ~VvIiDl~n~~~~~Rrpi~A-d----sAIMnP--~~~ViAL---rag~~LQiFnletK~---klks~~~~-e~VvfWkWi 115 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPISA-D----SAIMNP--ASKVIAL---KAGKTLQIFNIEMKS---KMKAHTMT-DDVTFWKWI 115 (365)
T ss_dssp EEEEEETTSTTSCEEEECCC-S----EEEECS--SSSEEEE---EETTEEEEEETTTTE---EEEEEECS-SCEEEEEEC
T ss_pred EEEEEECCCCCCcccccccc-c----eeeeCC--CccEEEE---ecCCeEEEechHHhh---hhcceecC-CccEEEEec
Confidence 79999998876554433222 2 333588 5677775 236889999999988 77777654 567777776
Q ss_pred CCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc--EEEEc------CCCcEEEEecCCce
Q psy9770 410 PLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE--VLSGD------SNGNIIVWTRGSNT 481 (811)
Q Consensus 410 p~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~--llsg~------~dg~I~vwd~~~~~ 481 (811)
+...+.-..+..|+-|+++......+.......+. ...|..-..+++.+ +++|- -.|.+.+|..+.+
T Consensus 116 --s~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~--~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~- 190 (365)
T 2xzh_A 116 --SLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK- 190 (365)
T ss_dssp --SSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGT--TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-
T ss_pred --CCCeEEEEcCCcEEEEcccCCCCCceeeecchhcc--cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-
Confidence 45667777788999999984333333222222222 35677778888888 23432 2378899998743
Q ss_pred EEEEeecccccceEEEEEecC---CcEEEEecC---CCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCC
Q psy9770 482 ISKFIRNVHEGSVFSICVLKE---GSIISAGGK---DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTR 555 (811)
Q Consensus 482 ~~~~~~~~h~~~V~~l~~s~d---g~~l~s~s~---dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~ 555 (811)
..+.+. +|.+....+.+..+ .++++.+.. .+++++-++....... ..+ ......+.+.|+
T Consensus 191 ~sQ~ie-Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~-~~f---~kk~vdi~fppe--------- 256 (365)
T 2xzh_A 191 VSQPIE-GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN-QPF---PKKAVDVFFPPE--------- 256 (365)
T ss_dssp EEEEEC-CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTC-CCC---CCEEEEECCCTT---------
T ss_pred ccceee-eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCC-CCc---ccccceeeCCcc---------
Confidence 444555 67554433322111 123332222 2577777774331100 011 111222223322
Q ss_pred CeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecC-CCCeEEEEEcCCCCEEEEE
Q psy9770 556 NCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDI-AEQAQSATFSPDGSIIIVG 634 (811)
Q Consensus 556 ~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-~~~v~~~~~spdg~~la~g 634 (811)
...+-..++..++.-..+..-+.-|.|.+||++++.++..-.. ...|...+.+.+..-+++.
T Consensus 257 -----------------a~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~V 319 (365)
T 2xzh_A 257 -----------------AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGV 319 (365)
T ss_dssp -----------------CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEE
T ss_pred -----------------ccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEE
Confidence 1233345778888888888899999999999999999988543 4556655555444445555
Q ss_pred EeCCeEEEEecCCcc
Q psy9770 635 CIAGRWLVMDSETRE 649 (811)
Q Consensus 635 ~~dg~i~i~d~~~~~ 649 (811)
...|.|.-..++...
T Consensus 320 nr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 320 NRKGQVLSVCVEEEN 334 (365)
T ss_dssp ETTCEEEEEEECTTT
T ss_pred cCCCEEEEEEECccc
Confidence 577777666655444
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.84 E-value=0.002 Score=66.44 Aligned_cols=196 Identities=11% Similarity=0.078 Sum_probs=124.9
Q ss_pred CCCeEEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCC----CCE--EEEEEe----CCeEEEEec--CCcceeEE
Q psy9770 586 SLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPD----GSI--IIVGCI----AGRWLVMDS--ETREAYSI 653 (811)
Q Consensus 586 ~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spd----g~~--la~g~~----dg~i~i~d~--~~~~~~~~ 653 (811)
...+++.....+-+.+||+ +++.+..+.. +.+..+.+.|+ |+. +++++. +++|.+|++ .+++ +..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 3456777777889999999 7888777654 67888887773 222 333333 468999966 3443 444
Q ss_pred ecC------CC-CCeEEEEE--ccC-CC-EEEEEecCCcEEEEEecC---CCcceeEEEEecCCCCCeeEEEeCCCCCeE
Q psy9770 654 HTD------GN-EPIQVVKF--SPD-GK-LLALGSRDNYIYVYEVSG---DSRKYSRVGRCTGHSSFITHLDWSEDSMYI 719 (811)
Q Consensus 654 ~~~------~~-~~i~~i~~--spd-g~-~lasgs~dg~I~iwd~~~---~~~~~~~~~~~~~h~~~V~~l~~spdg~~L 719 (811)
+.. .. ..+..+++ +|. ++ ++++...+|.+..|++.. +....+.+.++.. .+.+..+...+....|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence 421 11 45666777 674 44 677788899999999953 3244566666664 4578889998888899
Q ss_pred EEecCCceEEEEECCC-----CcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEe--cCCCC-EEEEEc-
Q psy9770 720 RSNSGDYELLYWNAGT-----CRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCER--SHDAR-VIATGD- 790 (811)
Q Consensus 720 ~s~s~Dg~i~iWd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~--s~dg~-~Las~~- 790 (811)
+.+-.|.-|..++.+- ++.+... ..+.-...+..|++ .++++ +|++++
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~-----------------------~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRA-----------------------DGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEB-----------------------SSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEe-----------------------cCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 9998886666666431 2222111 11111235777777 45665 666555
Q ss_pred CCCcEEEEeCC-CCCCCCc
Q psy9770 791 DFGKLKLYSYP-AVQPKLC 808 (811)
Q Consensus 791 ~dg~v~vw~~~-~~~~~~~ 808 (811)
.+..+.||+.. ..+.+..
T Consensus 252 G~~s~~Vydr~~~~~~vg~ 270 (355)
T 3amr_A 252 GNSSYAIYDRQGKNKYVAD 270 (355)
T ss_dssp GGTEEEEEESSTTCCEEEE
T ss_pred CCCEEEEEECCCCCcEEEE
Confidence 56689999986 4444433
No 302
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.79 E-value=0.041 Score=55.56 Aligned_cols=253 Identities=9% Similarity=0.038 Sum_probs=161.8
Q ss_pred cEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecC
Q psy9770 423 HINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKE 502 (811)
Q Consensus 423 ~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~d 502 (811)
.|.+.|+..+....+..- ...+.-.+|..++++--....+.+||+++.+.++.+. ....|.--.|..+
T Consensus 50 ~VvIiDl~n~~~~~Rrpi----------~AdsAIMnP~~~ViALrag~~LQiFnletK~klks~~--~~e~VvfWkWis~ 117 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPI----------SADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT--MTDDVTFWKWISL 117 (365)
T ss_dssp EEEEEETTSTTSCEEEEC----------CCSEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEE--CSSCEEEEEECSS
T ss_pred EEEEEECCCCCCcccccc----------ccceeeeCCCccEEEEecCCeEEEechHHhhhhccee--cCCccEEEEecCC
Confidence 577777776554433210 1224455788776654457889999999999888876 4557777788765
Q ss_pred CcEEEEecCCCcEEEEeCCCCCccceeeeccc----cCCeEEEeeCCCCe--EEEEe------CCCeEEEEEccCCceee
Q psy9770 503 GSIISAGGKDGRLLQFDSNLQPTGYEAQIAEH----LGGIRTVSEGRGSQ--LIVGT------TRNCILVGSLNLGFSPV 570 (811)
Q Consensus 503 g~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~----~~~v~~l~~~~~~~--l~~~~------~~~~i~~~d~~~~~~~~ 570 (811)
..+-+. + +..|+-|+++.... ....+..| ...|.....+++.. +++|- -.|.+.+|..+.+..+.
T Consensus 118 ~~L~lV-T-~taVyHWs~~~~s~-P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ 194 (365)
T 2xzh_A 118 NTVALV-T-DNAVYHWSMEGESQ-PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP 194 (365)
T ss_dssp SEEEEE-E-SSEEEEEESSTTCC-CEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE
T ss_pred CeEEEE-c-CCcEEEEcccCCCC-CceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccce
Confidence 544332 2 46899999975332 22222222 12344444555543 22332 23688999999999999
Q ss_pred eeecccceEEEEECCCC---CeEEEEEC---CCeEEEEeCCCC---cE-----EEE--ec---CCCCeEEEEEcCCCCEE
Q psy9770 571 VLGHTDELWALAAHPSL---SQFLTAGF---DRIVQLWDSMSH---SV-----VWS--KD---IAEQAQSATFSPDGSII 631 (811)
Q Consensus 571 ~~~h~~~v~~l~~sp~~---~~l~s~s~---dg~v~iwd~~~~---~~-----~~~--~~---~~~~v~~~~~spdg~~l 631 (811)
+.+|......+.+..+. .+|+.+.. .+.+.|.++... .. ... +. ...-..++..++.-..+
T Consensus 195 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygvi 274 (365)
T 2xzh_A 195 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV 274 (365)
T ss_dssp ECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEE
T ss_pred eeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEE
Confidence 99998776555443221 23343332 258999998432 11 111 11 12346678888888899
Q ss_pred EEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCC
Q psy9770 632 IVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGD 690 (811)
Q Consensus 632 a~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~ 690 (811)
..-+.-|.+++||++++.++..-+-..+.|...+...+..-++.....|.|.-..+++.
T Consensus 275 yviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 275 FLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred EEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 99999999999999999999888777777776666555445555568888877777664
No 303
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.77 E-value=0.0049 Score=67.28 Aligned_cols=245 Identities=9% Similarity=0.039 Sum_probs=141.0
Q ss_pred ceEEEEEecC--CcEEEEecCCCcEEEEeCCCCCccceeeecc-ccCCeEEEee-------CCCCe-EEEEeCCC-----
Q psy9770 493 SVFSICVLKE--GSIISAGGKDGRLLQFDSNLQPTGYEAQIAE-HLGGIRTVSE-------GRGSQ-LIVGTTRN----- 556 (811)
Q Consensus 493 ~V~~l~~s~d--g~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~-~~~~v~~l~~-------~~~~~-l~~~~~~~----- 556 (811)
....|+|.|. ++++++-...+.|++.|++.+.......... .......+++ ++++. ++++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678899983 4455544444678899988776622222211 2335788888 88775 77765554
Q ss_pred --eEEEEEccC--Cce-----eeeeecccceEEEEECCC-CCeEEEEECCCeEEEEeCC-------CCcE----------
Q psy9770 557 --CILVGSLNL--GFS-----PVVLGHTDELWALAAHPS-LSQFLTAGFDRIVQLWDSM-------SHSV---------- 609 (811)
Q Consensus 557 --~i~~~d~~~--~~~-----~~~~~h~~~v~~l~~sp~-~~~l~s~s~dg~v~iwd~~-------~~~~---------- 609 (811)
.|.+++... ... ..+.. .....+++++|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 366665444 222 12222 234567889995 4555566677889999987 4543
Q ss_pred ----EEEecCCCCeEEEEEcCCCCEEEEEE-eCCeEEEEecC--Ccce--eEEecC---CC------------CCeE-EE
Q psy9770 610 ----VWSKDIAEQAQSATFSPDGSIIIVGC-IAGRWLVMDSE--TREA--YSIHTD---GN------------EPIQ-VV 664 (811)
Q Consensus 610 ----~~~~~~~~~v~~~~~spdg~~la~g~-~dg~i~i~d~~--~~~~--~~~~~~---~~------------~~i~-~i 664 (811)
+...........++|+|+|+.|+++. ....|+.++.. .+.. ...+.+ .. ..-. .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 12223335578999999999666554 46688886653 3321 011111 00 1123 34
Q ss_pred EEc-------cCCCEEEEEecCCcEEEEEecCCCcceeEEEEec----------C----------CCCCeeEEEeCCC-C
Q psy9770 665 KFS-------PDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCT----------G----------HSSFITHLDWSED-S 716 (811)
Q Consensus 665 ~~s-------pdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~----------~----------h~~~V~~l~~spd-g 716 (811)
+.. ++|.++++-...+.|+.++ .++ ........-. + .-.....|++.++ |
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 444 4566666656677888887 333 1111111100 1 1124678999986 7
Q ss_pred CeEEEecCCceEEEEECCCCcccC
Q psy9770 717 MYIRSNSGDYELLYWNAGTCRQIP 740 (811)
Q Consensus 717 ~~L~s~s~Dg~i~iWd~~~~~~~~ 740 (811)
.++++=.....|+.++++....+.
T Consensus 457 ~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp EEEEEETTTTEEEEEEECCCC---
T ss_pred EEEEEeCCCCEEEEEECCCCcccc
Confidence 666666677889999987654443
No 304
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.74 E-value=0.026 Score=65.94 Aligned_cols=221 Identities=10% Similarity=-0.056 Sum_probs=128.8
Q ss_pred eEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCC-cceEEEeeeCCCcEEEEEe
Q psy9770 330 HIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDR-GHKITETKCSVDTVVAAEF 408 (811)
Q Consensus 330 ~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~-~~~~~~~~~~~~~V~~v~f 408 (811)
.|+..++...+....+. ....+..|+|.+. ++.++++ ....+.|+.+++..... ......+.........|++
T Consensus 405 ~Ir~i~l~~~~~~~l~~---~~~~~~gl~~d~~-~~~lY~s--D~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIP---NLRNVVALDTEVA-SNRIYWS--DLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp SEEEECTTSCCCEEEEC---SCSSEEEEEEETT-TTEEEEE--ETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred ceeEeeccCCcceeeec---CCCceEEEeeccc-CCeeEEe--eccceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 58888887665554443 3466789999982 3444444 46678899999875320 0022333334456678999
Q ss_pred cCCCCCeEEEEC-CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCC-CcEEEEc-C-CCcEEEEecCCceEEE
Q psy9770 409 HPLDRNNIVTCG-KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQG-GEVLSGD-S-NGNIIVWTRGSNTISK 484 (811)
Q Consensus 409 sp~~~~ll~~~~-d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~-g~llsg~-~-dg~I~vwd~~~~~~~~ 484 (811)
.+.+++|+++.. .+.|.+.+++ +.....+. ...-.....|++.|. |.|+... . .+.|.+.++.......
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~ld-G~~~~~l~------~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADTK-GVKRKTLF------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETT-SSSEEEEE------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred eecCCcEEEEecCCCeEEEEeCC-CCeEEEEE------eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 887888888766 5789888887 44333321 111234789999987 4555333 3 3789999987555444
Q ss_pred EeecccccceEEEEEecCCcEEEEe-cCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEE-eCCCeEEEEE
Q psy9770 485 FIRNVHEGSVFSICVLKEGSIISAG-GKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVG-TTRNCILVGS 562 (811)
Q Consensus 485 ~~~~~h~~~V~~l~~s~dg~~l~s~-s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~-~~~~~i~~~d 562 (811)
.+. ..-.....|++.+.+..|+.+ ...+.|...+++...................|++..+ .|+.+ ...+.|...+
T Consensus 552 lv~-~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 552 LVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSAN 629 (791)
T ss_dssp EEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEEEEE
T ss_pred EEe-CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEEEEe
Confidence 443 344578899999765555444 5567899999876544111111112223345555433 33333 3445666665
Q ss_pred ccC
Q psy9770 563 LNL 565 (811)
Q Consensus 563 ~~~ 565 (811)
..+
T Consensus 630 k~t 632 (791)
T 3m0c_C 630 RLT 632 (791)
T ss_dssp TTT
T ss_pred CCC
Confidence 433
No 305
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.71 E-value=0.00014 Score=84.47 Aligned_cols=231 Identities=8% Similarity=0.001 Sum_probs=137.6
Q ss_pred CcEEEEeccEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCC----CcEEEEecc
Q psy9770 272 GEIVYFVAAVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVS----LFTVSIIGI 347 (811)
Q Consensus 272 g~~l~~~~~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t----~~~~~~l~~ 347 (811)
..++++..+.|.+.++.+.....+......+..|+|++++..|....... ..|+.+++.+ ......+.
T Consensus 378 ~~ll~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~-------~~I~~~~~~g~~~~~~~~~~i~- 449 (699)
T 1n7d_A 378 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQ-------RMICSTQLDRAHGVSSYDTVIS- 449 (699)
T ss_dssp CCBCCCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTT-------TSBEEEESCCCCC-CCCCCBCC-
T ss_pred eeEEecCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCC-------CeEEEEecCCCCCCcceEEEEe-
Confidence 34444445788888888776655544455677899999777776665432 2799999875 22222221
Q ss_pred CCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEEC-C-CcEE
Q psy9770 348 GEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCG-K-SHIN 425 (811)
Q Consensus 348 ~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~-d-~~i~ 425 (811)
........|++.+. ++.++++ ....+.|.++++.... ....+.........+++.|.++.++++.. . +.|.
T Consensus 450 -~~~~~P~glavD~~-~g~LY~t--D~~~~~I~v~d~dg~~---~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~ 522 (699)
T 1n7d_A 450 -RDIQAPDGLAVDWI-HSNIYWT--DSVLGTVSVADTKGVK---RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIK 522 (699)
T ss_dssp -SCC--CCCEECCCS-SSBCEEC--CTTTSCEEEEBSSSCC---EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEE
T ss_pred -CCCCCcceEEEEee-CCcEEEE--eccCCeEEEEecCCCc---eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEE
Confidence 11233556888751 4555544 5667899999987654 33333333345678899998888887764 2 6777
Q ss_pred EEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-EE-EEcCCCcEEEEecCCceEEEEeec-ccccceEEEEEecC
Q psy9770 426 FWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-VL-SGDSNGNIIVWTRGSNTISKFIRN-VHEGSVFSICVLKE 502 (811)
Q Consensus 426 iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-ll-sg~~dg~I~vwd~~~~~~~~~~~~-~h~~~V~~l~~s~d 502 (811)
.++++ +.....+. ...-...+.|+|++++. ++ +-...+.|.++++........+.. ........|++..+
T Consensus 523 ~~~~d-G~~~~~l~------~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~ 595 (699)
T 1n7d_A 523 KGGLN-GVDIYSLV------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED 595 (699)
T ss_dssp BCCSS-SCCCCEES------CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT
T ss_pred EEeCC-CCCeeEEE------eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC
Confidence 77765 33222111 01112356799998755 44 666678899999875433333221 11223445666554
Q ss_pred CcEEEEecCCCcEEEEeCCCCCc
Q psy9770 503 GSIISAGGKDGRLLQFDSNLQPT 525 (811)
Q Consensus 503 g~~l~s~s~dg~I~~wd~~~~~~ 525 (811)
.++++....+.|..++..++..
T Consensus 596 -~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 596 -KVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp -EEEEECSTTTCEEEEETTTEEE
T ss_pred -EEEEEeCCCCeEEEEEccCCCc
Confidence 5556566678899998765543
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.69 E-value=0.014 Score=61.40 Aligned_cols=224 Identities=14% Similarity=0.121 Sum_probs=126.1
Q ss_pred cceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeee---ccccCCeEEEeeCCC----CeEEEEeCC------CeE
Q psy9770 492 GSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQI---AEHLGGIRTVSEGRG----SQLIVGTTR------NCI 558 (811)
Q Consensus 492 ~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~---~~~~~~v~~l~~~~~----~~l~~~~~~------~~i 558 (811)
.....|+|.|+|++++ +..+|.|++++ . ........+ .........++++++ +.++++... +.|
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~-~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR-E-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE-T-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE-C-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 3467899999999776 56679999998 2 222111111 122456788999987 677776542 678
Q ss_pred EEEEccCCc----eeeeeec------ccceEEEEECCCCCeEEEEEC-------------CCeEEEEeCCC---------
Q psy9770 559 LVGSLNLGF----SPVVLGH------TDELWALAAHPSLSQFLTAGF-------------DRIVQLWDSMS--------- 606 (811)
Q Consensus 559 ~~~d~~~~~----~~~~~~h------~~~v~~l~~sp~~~~l~s~s~-------------dg~v~iwd~~~--------- 606 (811)
..++..... ...+... ......++|.|+|.++++.+. .+.|.-++...
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 888876431 1111111 113358999999987666542 14566666543
Q ss_pred -----CcEEEEecCCCCeEEEEEcC-CCCEEEEEEeCCe--------EEEEecCCcc------------------eeEEe
Q psy9770 607 -----HSVVWSKDIAEQAQSATFSP-DGSIIIVGCIAGR--------WLVMDSETRE------------------AYSIH 654 (811)
Q Consensus 607 -----~~~~~~~~~~~~v~~~~~sp-dg~~la~g~~dg~--------i~i~d~~~~~------------------~~~~~ 654 (811)
...+....+ .....++|+| +|.++++-...+. |.+.. .+. .+..+
T Consensus 188 ~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 188 GRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV--PGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred CCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec--cCCcCCCCcccCCCCCCCCcCCeEec
Confidence 111222222 2356789999 5655444332222 33332 221 12222
Q ss_pred cCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcce--eEEEEecCCCCCeeEEEeCCCCCeEEEec
Q psy9770 655 TDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKY--SRVGRCTGHSSFITHLDWSEDSMYIRSNS 723 (811)
Q Consensus 655 ~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~--~~~~~~~~h~~~V~~l~~spdg~~L~s~s 723 (811)
. +......++| .+|.++++.-..+.|...++......+ .....+..-...+..+++.|||.++++..
T Consensus 265 ~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 P-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp T-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred C-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 2 2234567788 577776666566778888887543221 11122212236789999999998776653
No 307
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.68 E-value=0.0056 Score=63.13 Aligned_cols=182 Identities=12% Similarity=0.150 Sum_probs=119.5
Q ss_pred CcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCC----Ce---EEEEeC----CCeEEEEEcc--CCcee
Q psy9770 503 GSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRG----SQ---LIVGTT----RNCILVGSLN--LGFSP 569 (811)
Q Consensus 503 g~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~----~~---l~~~~~----~~~i~~~d~~--~~~~~ 569 (811)
..+++...+.+-+.+||+..... ..++. +.+..+..-++ +. +++++. .+.|.+|++. ++...
T Consensus 40 ~s~ii~t~k~~gL~Vydl~G~~l---~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLDGKML---HSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GCEEEEEETTTEEEEEETTSCEE---EEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred ccEEEEEcCCCCEEEEcCCCcEE---EEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 34566567778899999954433 22332 34444443332 11 333333 4689999774 33333
Q ss_pred eeee------cc-cceEEEEE--CCC-CC-eEEEEECCCeEEEEeCC-------CCcEEEEecCCCCeEEEEEcCCCCEE
Q psy9770 570 VVLG------HT-DELWALAA--HPS-LS-QFLTAGFDRIVQLWDSM-------SHSVVWSKDIAEQAQSATFSPDGSII 631 (811)
Q Consensus 570 ~~~~------h~-~~v~~l~~--sp~-~~-~l~s~s~dg~v~iwd~~-------~~~~~~~~~~~~~v~~~~~spdg~~l 631 (811)
.+.. .. ..+..+|+ +|. +. +++....+|.+..|++. +.+.+..+...+.+..+.+.+....|
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRL 194 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeE
Confidence 2211 11 56777888 774 43 67778889999999882 34667778889999999999999999
Q ss_pred EEEEeCCeEEEEecC-----CcceeEEec-C-CCCCeEEEEE--ccCCC-EEEEEe-cCCcEEEEEecC
Q psy9770 632 IVGCIAGRWLVMDSE-----TREAYSIHT-D-GNEPIQVVKF--SPDGK-LLALGS-RDNYIYVYEVSG 689 (811)
Q Consensus 632 a~g~~dg~i~i~d~~-----~~~~~~~~~-~-~~~~i~~i~~--spdg~-~lasgs-~dg~I~iwd~~~ 689 (811)
+++-++..|..|+.+ +++.+..+. + -...+..|++ .++|+ +|++.+ .++...+||...
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 999998888888855 345555543 2 1236788887 56666 666666 567899999863
No 308
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.59 E-value=0.11 Score=54.77 Aligned_cols=254 Identities=9% Similarity=0.035 Sum_probs=164.8
Q ss_pred CcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEec
Q psy9770 422 SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLK 501 (811)
Q Consensus 422 ~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~ 501 (811)
..|.+.|+..+....+.. -...+.-.+|..++++--....+.+||+++.+.++.+. ....|.--.|-.
T Consensus 48 ~~vvIiDl~~~~~~~rrp----------i~AdsAIMnP~~~iiALrag~~lQiFnle~K~klks~~--~~e~VvfWkWis 115 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRP----------ISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT--MTDDVTFWKWIS 115 (494)
T ss_dssp CEEEEEETTSTTSCEEEE----------CCCSEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEE--CSSCCCEEEEEE
T ss_pred CeEEEEECCCCCcceecc----------cccceeeeCCCCcEEEEecCCeEEEEchHHhhhhccee--cCCCceEEEecC
Confidence 367777777655443321 11234556787776644457899999999998888876 344666667765
Q ss_pred CCcEEEEecCCCcEEEEeCCCCCccceeeeccc----cCCeEEEeeCCCCeE--EEEe------CCCeEEEEEccCCcee
Q psy9770 502 EGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEH----LGGIRTVSEGRGSQL--IVGT------TRNCILVGSLNLGFSP 569 (811)
Q Consensus 502 dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~----~~~v~~l~~~~~~~l--~~~~------~~~~i~~~d~~~~~~~ 569 (811)
+..+-+ . .+..|+-|++..... ....+..| ...|.....+++... ++|- -.|.+.+|..+.+..+
T Consensus 116 ~~~l~l-V-T~taVyHWsi~~~s~-P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ 192 (494)
T 1bpo_A 116 LNTVAL-V-TDNAVYHWSMEGESQ-PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ 192 (494)
T ss_dssp TTEEEE-E-CSSEEEEEESSSSCC-CEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE
T ss_pred CCeEEE-E-cCCeeEEecccCCCC-chhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccc
Confidence 544333 2 357899999965332 22222222 123444444555432 2232 2368899999999999
Q ss_pred eeeecccceEEEEECCCC---CeEEEEECC---CeEEEEeCCCC---c-----EEEEe--c---CCCCeEEEEEcCCCCE
Q psy9770 570 VVLGHTDELWALAAHPSL---SQFLTAGFD---RIVQLWDSMSH---S-----VVWSK--D---IAEQAQSATFSPDGSI 630 (811)
Q Consensus 570 ~~~~h~~~v~~l~~sp~~---~~l~s~s~d---g~v~iwd~~~~---~-----~~~~~--~---~~~~v~~~~~spdg~~ 630 (811)
.+.||......+.+..+. ..|+.+... +.+.|.++... . ..... . ...-..++.+++.-..
T Consensus 193 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygv 272 (494)
T 1bpo_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (494)
T ss_dssp EECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTE
T ss_pred hheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCE
Confidence 999998877666654322 244444432 78999998543 1 11111 1 1234677888888889
Q ss_pred EEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCC
Q psy9770 631 IIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGD 690 (811)
Q Consensus 631 la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~ 690 (811)
+..-+.-|.+++||+.++.++..-+-..+.|...+...+..-++.....|.|.-..+++.
T Consensus 273 iyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 273 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred EEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 999999999999999999999888777777776666665555666668888877777664
No 309
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.54 E-value=0.02 Score=60.31 Aligned_cols=234 Identities=13% Similarity=0.046 Sum_probs=131.9
Q ss_pred EEEEEEcCCCc-EEEEcCCCcEEEEecCCceEEEEee------cccccceEEEEEecC----CcEEEEecC-------CC
Q psy9770 452 VTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIR------NVHEGSVFSICVLKE----GSIISAGGK-------DG 513 (811)
Q Consensus 452 v~~l~~s~~g~-llsg~~dg~I~vwd~~~~~~~~~~~------~~h~~~V~~l~~s~d----g~~l~s~s~-------dg 513 (811)
...++|.|+|+ ++++...|.|++++.. +.....+. ....+....|+++|+ +.+.++-.. ..
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 68999999999 8888889999999854 33221111 022456789999995 544443222 23
Q ss_pred cEEEEeCCCC--Ccccee----eecc---ccCCeEEEeeCCCCeEEEEeCC--------------CeEEEEEccCC----
Q psy9770 514 RLLQFDSNLQ--PTGYEA----QIAE---HLGGIRTVSEGRGSQLIVGTTR--------------NCILVGSLNLG---- 566 (811)
Q Consensus 514 ~I~~wd~~~~--~~~~~~----~~~~---~~~~v~~l~~~~~~~l~~~~~~--------------~~i~~~d~~~~---- 566 (811)
.|..|++... ...... .++. .......+++.+++.|+++..+ +.|..++.+..
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5666666432 111111 1111 1112356889999999988643 47888887653
Q ss_pred ---------ceeeeeecccceEEEEECC-CCCeEEEEEC-CCeEEEEeCCCCc---------------------------
Q psy9770 567 ---------FSPVVLGHTDELWALAAHP-SLSQFLTAGF-DRIVQLWDSMSHS--------------------------- 608 (811)
Q Consensus 567 ---------~~~~~~~h~~~v~~l~~sp-~~~~l~s~s~-dg~v~iwd~~~~~--------------------------- 608 (811)
...++..-......++|+| ++.++++-.. ++.=.|.-+..+.
T Consensus 179 npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
T 2g8s_A 179 NPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVA 258 (353)
T ss_dssp CTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCT
T ss_pred CCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCC
Confidence 1222222223567999999 5554444321 1111222221111
Q ss_pred ----EEEEecCCCCeEEEEEcC-------CCCEEEEEEeCCeEEEEecCCcceeEE---ecCCCCCeEEEEEccCCCEEE
Q psy9770 609 ----VVWSKDIAEQAQSATFSP-------DGSIIIVGCIAGRWLVMDSETREAYSI---HTDGNEPIQVVKFSPDGKLLA 674 (811)
Q Consensus 609 ----~~~~~~~~~~v~~~~~sp-------dg~~la~g~~dg~i~i~d~~~~~~~~~---~~~~~~~i~~i~~spdg~~la 674 (811)
.+........+..++|.. +|.++++....+.|..+++..++.... +......+..+++.|||.+++
T Consensus 259 ~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv 338 (353)
T 2g8s_A 259 GTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYV 338 (353)
T ss_dssp TSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEE
T ss_pred CccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEE
Confidence 111122234567777753 466777666778888888876543322 223335789999999998666
Q ss_pred EEecCCcEEEEEe
Q psy9770 675 LGSRDNYIYVYEV 687 (811)
Q Consensus 675 sgs~dg~I~iwd~ 687 (811)
+.. +..=+||.+
T Consensus 339 ~td-~~~g~I~ri 350 (353)
T 2g8s_A 339 LTD-ESSGELLKV 350 (353)
T ss_dssp EEC-STTEEEEEE
T ss_pred EEe-CCCCEEEEE
Confidence 433 223345554
No 310
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.50 E-value=0.14 Score=53.88 Aligned_cols=272 Identities=11% Similarity=0.102 Sum_probs=163.6
Q ss_pred CeEEEEeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEe
Q psy9770 329 PHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEF 408 (811)
Q Consensus 329 ~~I~iWd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~f 408 (811)
..|.|.|+..+..+.+.++.. .+.-.+| ..+.||. -...++.|+|+++.. ++..+.-.. .|.--.|
T Consensus 48 ~~vvIiDl~~~~~~~rrpi~A-----dsAIMnP--~~~iiAL---rag~~lQiFnle~K~---klks~~~~e-~VvfWkW 113 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPISA-----DSAIMNP--ASKVIAL---KAGKTLQIFNIEMKS---KMKAHTMTD-DVTFWKW 113 (494)
T ss_dssp CEEEEEETTSTTSCEEEECCC-----SEEEECS--SSSCEEE---EETTEEEEEETTTTE---EEEEEECSS-CCCEEEE
T ss_pred CeEEEEECCCCCcceeccccc-----ceeeeCC--CCcEEEE---ecCCeEEEEchHHhh---hhcceecCC-CceEEEe
Confidence 389999998876554433222 2344677 5677775 347899999999988 777777544 4555566
Q ss_pred cCCCCCeEEEECCCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc--EEEEc------CCCcEEEEecCCc
Q psy9770 409 HPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE--VLSGD------SNGNIIVWTRGSN 480 (811)
Q Consensus 409 sp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~--llsg~------~dg~I~vwd~~~~ 480 (811)
- +...+.-..+..|+-|+++......+.......+. ...|..-..+++.+ +++|- -.|.+.+|..+.+
T Consensus 114 i--s~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~--~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~ 189 (494)
T 1bpo_A 114 I--SLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 189 (494)
T ss_dssp E--ETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGT--TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC
T ss_pred c--CCCeEEEEcCCeeEEecccCCCCchhheecchhcc--cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc
Confidence 5 35677777788999999974333333222222222 35677788888888 23432 2478899998743
Q ss_pred eEEEEeecccccceEEEEEecC---CcEEEEecC---CCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeC
Q psy9770 481 TISKFIRNVHEGSVFSICVLKE---GSIISAGGK---DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTT 554 (811)
Q Consensus 481 ~~~~~~~~~h~~~V~~l~~s~d---g~~l~s~s~---dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~ 554 (811)
..+.+. +|.+....+.+..+ ..+++.+.. .+.+++-++...... ...+. .....+.+.|+
T Consensus 190 -~sQ~ie-Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~-~~~f~---kk~vdv~fppe-------- 255 (494)
T 1bpo_A 190 -VSQPIE-GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG-NQPFP---KKAVDVFFPPE-------- 255 (494)
T ss_dssp -CEEEEC-CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTT-CCCCC---CEEEECCCCTT--------
T ss_pred -ccchhe-eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccC-CCCcc---ceeeeeeCCcc--------
Confidence 444455 77665544433211 123333333 267777777543110 00000 01112222222
Q ss_pred CCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecC-CCCeEEEEEcCCCCEEEE
Q psy9770 555 RNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDI-AEQAQSATFSPDGSIIIV 633 (811)
Q Consensus 555 ~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-~~~v~~~~~spdg~~la~ 633 (811)
...+-..++..++.-..+...+.-|.|.+||+.++.++..-.. ...|...+......-+++
T Consensus 256 ------------------~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~ 317 (494)
T 1bpo_A 256 ------------------AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIG 317 (494)
T ss_dssp ------------------STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEE
T ss_pred ------------------cccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEE
Confidence 1223345788888888888999999999999999999988443 455666555555555555
Q ss_pred EEeCCeEEEEecCCcce
Q psy9770 634 GCIAGRWLVMDSETREA 650 (811)
Q Consensus 634 g~~dg~i~i~d~~~~~~ 650 (811)
....|.|.-..+.....
T Consensus 318 Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 318 VNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EETTCEEEEEEECTTTH
T ss_pred EccCceEEEEEEccccc
Confidence 55777776666655443
No 311
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.48 E-value=0.13 Score=53.41 Aligned_cols=231 Identities=10% Similarity=0.073 Sum_probs=129.9
Q ss_pred ccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeee----ccccCCeEEEeeCCC----CeEEEEe---CCCeEE
Q psy9770 491 EGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQI----AEHLGGIRTVSEGRG----SQLIVGT---TRNCIL 559 (811)
Q Consensus 491 ~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~----~~~~~~v~~l~~~~~----~~l~~~~---~~~~i~ 559 (811)
-.....|+|.|||.++++--..|.|++++...+.......+ .........++++|+ +.+++.. ..+.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 44578999999999888655589999998755443112112 233456788999884 7776642 456777
Q ss_pred EEEccCC---------ceeeeee----cccceEEEEECCCCCeEEEEEC-------------CCeEEEEeCCCC------
Q psy9770 560 VGSLNLG---------FSPVVLG----HTDELWALAAHPSLSQFLTAGF-------------DRIVQLWDSMSH------ 607 (811)
Q Consensus 560 ~~d~~~~---------~~~~~~~----h~~~v~~l~~sp~~~~l~s~s~-------------dg~v~iwd~~~~------ 607 (811)
.+.+... ...++.. ....-..|+|.|||.++++.+. .|.|.-.+....
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 7776541 1112211 1123456999999988777653 244444454322
Q ss_pred ---cEEEEecCCCCeEEEEEcCCCCEEEEEEe-CCeEEEEecCCcc------------------eeEEecCCCCCeEEEE
Q psy9770 608 ---SVVWSKDIAEQAQSATFSPDGSIIIVGCI-AGRWLVMDSETRE------------------AYSIHTDGNEPIQVVK 665 (811)
Q Consensus 608 ---~~~~~~~~~~~v~~~~~spdg~~la~g~~-dg~i~i~d~~~~~------------------~~~~~~~~~~~i~~i~ 665 (811)
..++...+ .....++|+|+|.+.++-.. ++.=.|.-+..+. .+..+..+......|+
T Consensus 191 f~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~ 269 (347)
T 3das_A 191 FPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIA 269 (347)
T ss_dssp STTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEE
T ss_pred CCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceE
Confidence 12333333 23567899998876554321 2211222222221 1122222223456677
Q ss_pred EccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEec
Q psy9770 666 FSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNS 723 (811)
Q Consensus 666 ~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s 723 (811)
|. +|..+...-..+.|....+..++...+...-+.+....+..|+..|||.++++.+
T Consensus 270 ~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 270 YA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred EE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 76 4666665555667777777654211111223445557899999999998766643
No 312
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.46 E-value=0.0059 Score=62.40 Aligned_cols=156 Identities=10% Similarity=0.033 Sum_probs=106.1
Q ss_pred eEEEEECCCCCeEEEEE-CCCeEEEEeCCCCcEEEE-ecC-----C--CCeEEEEE---cCCCCEEEEEEe---------
Q psy9770 578 LWALAAHPSLSQFLTAG-FDRIVQLWDSMSHSVVWS-KDI-----A--EQAQSATF---SPDGSIIIVGCI--------- 636 (811)
Q Consensus 578 v~~l~~sp~~~~l~s~s-~dg~v~iwd~~~~~~~~~-~~~-----~--~~v~~~~~---spdg~~la~g~~--------- 636 (811)
..++.|++....|..++ ..++|..||...+..... +.. . ..+..+.| .|+++++++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 34778887666666666 789999999986654333 221 1 13679999 688888776442
Q ss_pred ----CCeEEEEecC---CcceeEEecC-------------CCCCeEEEEEccCCCEEEEEecC-CcEEEEEecCCCccee
Q psy9770 637 ----AGRWLVMDSE---TREAYSIHTD-------------GNEPIQVVKFSPDGKLLALGSRD-NYIYVYEVSGDSRKYS 695 (811)
Q Consensus 637 ----dg~i~i~d~~---~~~~~~~~~~-------------~~~~i~~i~~spdg~~lasgs~d-g~I~iwd~~~~~~~~~ 695 (811)
+..|..||+. +++.+....- .......++..++|+..++++.. +.|..++.+. ....
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG--~~~~ 172 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG--KTVS 172 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS--CCEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC--CEEe
Confidence 5789999999 7776544331 11347899999999999988877 7655554443 2222
Q ss_pred EEEE-e--cCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCC
Q psy9770 696 RVGR-C--TGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 696 ~~~~-~--~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
.... . .......+.|++.|||..|++....|.|..+|+.+
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 1111 1 11123467999999999988887799999999873
No 313
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.44 E-value=0.05 Score=56.51 Aligned_cols=225 Identities=17% Similarity=0.156 Sum_probs=128.2
Q ss_pred eEEEEEEcCCCcEEEEcC-CCcEEEEecCCceEEEE--ee---cccccceEEEEEecC----CcEEEEe--cCCCcEEEE
Q psy9770 451 YVTCLAFTQGGEVLSGDS-NGNIIVWTRGSNTISKF--IR---NVHEGSVFSICVLKE----GSIISAG--GKDGRLLQF 518 (811)
Q Consensus 451 ~v~~l~~s~~g~llsg~~-dg~I~vwd~~~~~~~~~--~~---~~h~~~V~~l~~s~d----g~~l~s~--s~dg~I~~w 518 (811)
....++|.|+|.++++.. .|.|++++..+++.... +. ....+....|+++|+ +.+.++- ..++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 378999999999877766 89999998765554222 11 123567899999985 4444421 245567667
Q ss_pred eCCCC-----Ccc-cee---eecc-ccCCeEEEeeCCCCeEEEEeC--------------CCeEEEEEccCC--------
Q psy9770 519 DSNLQ-----PTG-YEA---QIAE-HLGGIRTVSEGRGSQLIVGTT--------------RNCILVGSLNLG-------- 566 (811)
Q Consensus 519 d~~~~-----~~~-~~~---~~~~-~~~~v~~l~~~~~~~l~~~~~--------------~~~i~~~d~~~~-------- 566 (811)
.+... ... ... .++. .......+.+.+++.|+++.. .+.|..++.+..
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~ 192 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFP 192 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSST
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCC
Confidence 66542 110 111 1221 122345688999999888753 367777776643
Q ss_pred ceee-eeecccceEEEEECCCCCeEEEEE-CCCeEEEEeCCCCc------------------EEEEecCC-CCeEEEEEc
Q psy9770 567 FSPV-VLGHTDELWALAAHPSLSQFLTAG-FDRIVQLWDSMSHS------------------VVWSKDIA-EQAQSATFS 625 (811)
Q Consensus 567 ~~~~-~~~h~~~v~~l~~sp~~~~l~s~s-~dg~v~iwd~~~~~------------------~~~~~~~~-~~v~~~~~s 625 (811)
...+ ..+|. ....++|+|++.++++-. .|+.-.|--+..+. ++..+... .....++|.
T Consensus 193 ~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~ 271 (347)
T 3das_A 193 GSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA 271 (347)
T ss_dssp TCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE
T ss_pred CCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE
Confidence 1122 23444 456899999877665532 23222222222211 11112222 245666775
Q ss_pred CCCCEEEEEEeCCeEEEEecCCcce----eEEecCCCCCeEEEEEccCCCEEEEEe
Q psy9770 626 PDGSIIIVGCIAGRWLVMDSETREA----YSIHTDGNEPIQVVKFSPDGKLLALGS 677 (811)
Q Consensus 626 pdg~~la~g~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~i~~spdg~~lasgs 677 (811)
+|..+......+.|..+.+..... ...+.+....+..|+..|||.++++.+
T Consensus 272 -~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 272 -EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp -TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred -cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 455555555556676666654332 233444456789999999997666543
No 314
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.44 E-value=0.0003 Score=81.64 Aligned_cols=205 Identities=10% Similarity=0.005 Sum_probs=122.3
Q ss_pred ccceEEccCCcEEEEec---cEEEEEeCCC----CceEEec-cCCCCeEEEEEcCCCcEEEEe-eccCCCCCCCCCeEEE
Q psy9770 263 RSNLYLLPTGEIVYFVA---AVAVLYNVEE----QTQRHYL-GHTDDIKCLSIHPNKLLIATG-QVAGHDAREGKPHIRI 333 (811)
Q Consensus 263 ~~~l~~spdg~~l~~~~---~~i~i~d~~~----~~~~~~~-~h~~~V~~la~spdg~~Lasg-~~dg~~~~~~~~~I~i 333 (811)
...|+|.+.+..||+++ +.|..+++.+ .....+. ........|++.+.+..|..+ ...+ .|.+
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~--------~I~v 479 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG--------TVSV 479 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTS--------CEEE
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCC--------eEEE
Confidence 45788999888888874 6888899876 2222222 122345678998655444433 3344 7999
Q ss_pred EeCCCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCC
Q psy9770 334 WNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDR 413 (811)
Q Consensus 334 Wd~~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~ 413 (811)
+++........+. ........|++.| .+.+|+.......+.|.++++.... ....+.........|+|+|+++
T Consensus 480 ~d~dg~~~~~l~~--~~~~~P~giavDp--~~g~ly~td~~~~~~I~~~~~dG~~---~~~l~~~~l~~PnGlavd~~~~ 552 (699)
T 1n7d_A 480 ADTKGVKRKTLFR--EQGSKPRAIVVDP--VHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSG 552 (699)
T ss_dssp EBSSSCCEEEECC--CSSCCCCCEECCS--SSSCCEECCCSSSCCEEBCCSSSCC---CCEESCSSCSSCCCEEECTTTC
T ss_pred EecCCCceEEEEe--CCCCCcceEEEcc--CCCcEEEcccCCCCeEEEEeCCCCC---eeEEEeCCCCCccEEEEeccCC
Confidence 9987665444433 2234467888988 4444443222223788888776443 2222222234567899999888
Q ss_pred CeEEEEC-CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEee
Q psy9770 414 NNIVTCG-KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIR 487 (811)
Q Consensus 414 ~ll~~~~-d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~ 487 (811)
.|+++-. .+.|..++++ +............ ..+ ...|++..+.-+++....+.|..++..+++.+..+.
T Consensus 553 ~LY~aD~~~~~I~~~d~d-G~~~~~~~~~~~~-~~~---P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 553 RLYWVDSKLHSISSIDVN-GGNRKTILEDEKR-LAH---PFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp CEEEEETTTTEEEEECSS-SSCCEEECCCSSS-CSS---CCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEEEEecCCCeEEEEccC-CCceEEEEecCCc-CCC---ceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 8888876 5778888887 4333222111011 112 334555554334566677899999988888777664
No 315
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.35 E-value=0.028 Score=57.36 Aligned_cols=155 Identities=10% Similarity=0.044 Sum_probs=105.5
Q ss_pred EEEEEEcCC-CcEE-EEcCCCcEEEEecCCceEEEEeeccc-------ccceEEEEE---ecCCcEEEEec---------
Q psy9770 452 VTCLAFTQG-GEVL-SGDSNGNIIVWTRGSNTISKFIRNVH-------EGSVFSICV---LKEGSIISAGG--------- 510 (811)
Q Consensus 452 v~~l~~s~~-g~ll-sg~~dg~I~vwd~~~~~~~~~~~~~h-------~~~V~~l~~---s~dg~~l~s~s--------- 510 (811)
..++.|.+. +.++ +.-..|.|..|+...+....... .. ...+..|.| .++++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~-~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVI-DGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECC-TTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEec-CCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 457889774 5555 44478999999998665444322 21 124678999 58888877533
Q ss_pred ----CCCcEEEEeCC---CCCccceeeecc-----------ccCCeEEEeeCCCCeEEE-EeCC-CeEEEEEccCCceee
Q psy9770 511 ----KDGRLLQFDSN---LQPTGYEAQIAE-----------HLGGIRTVSEGRGSQLIV-GTTR-NCILVGSLNLGFSPV 570 (811)
Q Consensus 511 ----~dg~I~~wd~~---~~~~~~~~~~~~-----------~~~~v~~l~~~~~~~l~~-~~~~-~~i~~~d~~~~~~~~ 570 (811)
.+..|..+|+. +++......+.. .......++..++|..++ ++.. +.|...+.+......
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~ 173 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVST 173 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEee
Confidence 26789999998 665534444432 223477888888888777 6777 788888877653332
Q ss_pred eeec------ccceEEEEECCCCCeEEEEECCCeEEEEeCCCC
Q psy9770 571 VLGH------TDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH 607 (811)
Q Consensus 571 ~~~h------~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~ 607 (811)
+... ......|+++|++..|+.....+.|..+|+...
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 2111 123679999999998888877999999998854
No 316
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.24 E-value=0.16 Score=53.31 Aligned_cols=231 Identities=14% Similarity=0.137 Sum_probs=127.8
Q ss_pred cceEEEEEecCCc-EEEEecCCCcEEEEeCCCCCccceeee----ccccCCeEEEeeCC----CCeEEEEeC--------
Q psy9770 492 GSVFSICVLKEGS-IISAGGKDGRLLQFDSNLQPTGYEAQI----AEHLGGIRTVSEGR----GSQLIVGTT-------- 554 (811)
Q Consensus 492 ~~V~~l~~s~dg~-~l~s~s~dg~I~~wd~~~~~~~~~~~~----~~~~~~v~~l~~~~----~~~l~~~~~-------- 554 (811)
.....|+|.|+|+ +++ +...|.|++++.+.........+ .........++++| ++.+++...
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 3567999999999 666 56789999998643211001111 12234567889988 477777643
Q ss_pred CCeEEEEEccCC------ceeeeeec------ccceEEEEECCCCCeEEEEECC-------------CeEEEEeCCCC--
Q psy9770 555 RNCILVGSLNLG------FSPVVLGH------TDELWALAAHPSLSQFLTAGFD-------------RIVQLWDSMSH-- 607 (811)
Q Consensus 555 ~~~i~~~d~~~~------~~~~~~~h------~~~v~~l~~sp~~~~l~s~s~d-------------g~v~iwd~~~~-- 607 (811)
...|..+++... ....+... ......|+|.|+|.++++.+.. |.|.-++....
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 236777766432 11111111 1123579999999766665432 45666665432
Q ss_pred ------------cEEEEecCCCCeEEEEEcCCCCEEEEEEeCC----eEEEEecCCcc----------------------
Q psy9770 608 ------------SVVWSKDIAEQAQSATFSPDGSIIIVGCIAG----RWLVMDSETRE---------------------- 649 (811)
Q Consensus 608 ------------~~~~~~~~~~~v~~~~~spdg~~la~g~~dg----~i~i~d~~~~~---------------------- 649 (811)
..+....+ .....++|+|+...|.++.... .|.+. ..+.
T Consensus 177 ~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i--~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIP--QKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECC--CTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEe--ccCCcCCCCCccCCCCCCCCccCccc
Confidence 11222222 3467899999433455544321 23221 1111
Q ss_pred ---------eeEEecCCCCCeEEEEEcc-------CCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeC
Q psy9770 650 ---------AYSIHTDGNEPIQVVKFSP-------DGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWS 713 (811)
Q Consensus 650 ---------~~~~~~~~~~~i~~i~~sp-------dg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s 713 (811)
.+..+. +......++|.. +|.++++.-..+.|...++..+. ......-+......+..+++.
T Consensus 254 ~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~rp~~v~~~ 331 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDK-VTEDGRILTDRGQRIRDVRTG 331 (353)
T ss_dssp BSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTE-EEEEEEESGGGCCCEEEEEEC
T ss_pred CCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCe-EeeeEEcccCCCCceeEEEEC
Confidence 111112 123466778863 57777776667788888887542 111111122334578999999
Q ss_pred CCCCeEEEec-CCceE
Q psy9770 714 EDSMYIRSNS-GDYEL 728 (811)
Q Consensus 714 pdg~~L~s~s-~Dg~i 728 (811)
|||.++++.. .+|.|
T Consensus 332 pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 332 PDGYLYVLTDESSGEL 347 (353)
T ss_dssp TTSCEEEEECSTTEEE
T ss_pred CCCcEEEEEeCCCCEE
Confidence 9998766543 45543
No 317
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.23 E-value=0.03 Score=57.31 Aligned_cols=212 Identities=16% Similarity=0.119 Sum_probs=112.0
Q ss_pred CcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecCC-----CcEEEEeCCCCC---ccceeeeccccCCeEEE
Q psy9770 470 GNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKD-----GRLLQFDSNLQP---TGYEAQIAEHLGGIRTV 541 (811)
Q Consensus 470 g~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~d-----g~I~~wd~~~~~---~~~~~~~~~~~~~v~~l 541 (811)
..+.+||..+.+....-. .........+..-++.+++.|+.+ ..+.+||..+.. ......++........+
T Consensus 31 ~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPS-ITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT 109 (301)
T ss_dssp CCEEEEETTTTEEEECCC-CSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred eEEEEEcCCCCeEEeCCC-CChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence 368899988776544322 111111111222367777778765 368899988776 42222222222222222
Q ss_pred eeCCCCeEEE-EeC-----CCeEEEEEccCCceeeeeecc---cceEEEEECCCCCeEEEEECC-----CeEEEEeCCCC
Q psy9770 542 SEGRGSQLIV-GTT-----RNCILVGSLNLGFSPVVLGHT---DELWALAAHPSLSQFLTAGFD-----RIVQLWDSMSH 607 (811)
Q Consensus 542 ~~~~~~~l~~-~~~-----~~~i~~~d~~~~~~~~~~~h~---~~v~~l~~sp~~~~l~s~s~d-----g~v~iwd~~~~ 607 (811)
.. ++.+++ |+. .+.+.++|..+..-..+.... .....+.+ ++..++.|+.+ ..+.+||+.+.
T Consensus 110 -~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 110 -TL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp -EE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred -EE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 22 344444 433 246888998776433322111 11112222 56677777654 45889998887
Q ss_pred cEEEEecCCC---CeEEEEEcCCCCEEEEEEeC-----CeEEEEecCCcceeEE--ecCCCCCeEEEEEccCCCEEEEEe
Q psy9770 608 SVVWSKDIAE---QAQSATFSPDGSIIIVGCIA-----GRWLVMDSETREAYSI--HTDGNEPIQVVKFSPDGKLLALGS 677 (811)
Q Consensus 608 ~~~~~~~~~~---~v~~~~~spdg~~la~g~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~i~~spdg~~lasgs 677 (811)
+-........ ....+.+ ++++++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+
T Consensus 186 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 261 (301)
T 2vpj_A 186 HWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAG 261 (301)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred cEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcC
Confidence 6544322221 1122222 66777777664 4689999987653322 2222222223333 777888877
Q ss_pred cC-----CcEEEEEecCC
Q psy9770 678 RD-----NYIYVYEVSGD 690 (811)
Q Consensus 678 ~d-----g~I~iwd~~~~ 690 (811)
.+ ..|.+||..++
T Consensus 262 ~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 262 YDGNSLLSSIECYDPIID 279 (301)
T ss_dssp BCSSSBEEEEEEEETTTT
T ss_pred cCCCcccccEEEEcCCCC
Confidence 65 35778887764
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.15 E-value=0.069 Score=55.73 Aligned_cols=192 Identities=10% Similarity=0.110 Sum_probs=115.6
Q ss_pred eEEEeeCCCCeEEEEe-------------CCCeEEEEEccCC--ceee--eee-----cccceEEEEECC--CCC-eEEE
Q psy9770 538 IRTVSEGRGSQLIVGT-------------TRNCILVGSLNLG--FSPV--VLG-----HTDELWALAAHP--SLS-QFLT 592 (811)
Q Consensus 538 v~~l~~~~~~~l~~~~-------------~~~~i~~~d~~~~--~~~~--~~~-----h~~~v~~l~~sp--~~~-~l~s 592 (811)
...+...+++.+++++ ..|.|+++|.++. .... +.+ ..-....+.+.+ ++. +|+.
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 4445566777877776 6889999998743 2222 222 223667787765 343 4444
Q ss_pred EE-C--CCeEEEEeCCCC--cEEE--EecC--CCCeEEEEEcCCCCEEEEEE-----------------eCCeEEEEecC
Q psy9770 593 AG-F--DRIVQLWDSMSH--SVVW--SKDI--AEQAQSATFSPDGSIIIVGC-----------------IAGRWLVMDSE 646 (811)
Q Consensus 593 ~s-~--dg~v~iwd~~~~--~~~~--~~~~--~~~v~~~~~spdg~~la~g~-----------------~dg~i~i~d~~ 646 (811)
+. . +.+|.+|++... .... .... -...+.+++.++|.+.++.. ..|.|..+|..
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 43 2 467888776543 2222 2222 24678999999998777653 12556666653
Q ss_pred CcceeEEecCCCCCeEEEEEccCCCEEEEEe-cCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCC-CCCeEEEecC
Q psy9770 647 TREAYSIHTDGNEPIQVVKFSPDGKLLALGS-RDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSE-DSMYIRSNSG 724 (811)
Q Consensus 647 ~~~~~~~~~~~~~~i~~i~~spdg~~lasgs-~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~L~s~s~ 724 (811)
+.. .+...-..-+.++||||++.|+.+. ..+.|+.|++...+. ......+ ...+..-.+++.+ +|++.+++..
T Consensus 212 --~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~-l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 212 --DVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT-LTPLRVL-SFDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp --CCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC-EEEEEEE-ECSSEEEEEEECTTTCCEEEEEES
T ss_pred --eEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc-EecCEEE-eCCCCCceEEEeCCCCcEEEEecC
Confidence 222 2222224468899999998887765 467899999975332 2222233 2245677899998 5988887654
Q ss_pred C-ceEEEEECC
Q psy9770 725 D-YELLYWNAG 734 (811)
Q Consensus 725 D-g~i~iWd~~ 734 (811)
+ +.|..|+..
T Consensus 287 ~g~~v~~~~P~ 297 (355)
T 3sre_A 287 NGMRIFFYDAE 297 (355)
T ss_dssp CHHHHHSCCTT
T ss_pred CceEEEEECCC
Confidence 4 355555543
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.13 E-value=0.036 Score=56.78 Aligned_cols=225 Identities=15% Similarity=0.111 Sum_probs=114.9
Q ss_pred CcEEEEecCC----CcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCC-----CeEEEEEccCCceeeeee
Q psy9770 503 GSIISAGGKD----GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTR-----NCILVGSLNLGFSPVVLG 573 (811)
Q Consensus 503 g~~l~s~s~d----g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~-----~~i~~~d~~~~~~~~~~~ 573 (811)
+.+++.|+.+ ..+.+||+..........++...... +++...+..+++|+.+ +.+.+||..+..-..+..
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA-GMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccc-eEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 3455556543 35778888766542222222211111 2222233344444433 368888887763332221
Q ss_pred ---cccceEEEEECCCCCeEEEEECCC-----eEEEEeCCCCcEEEEecCC--CCeEEEEEcCCCCEEEEEEeC------
Q psy9770 574 ---HTDELWALAAHPSLSQFLTAGFDR-----IVQLWDSMSHSVVWSKDIA--EQAQSATFSPDGSIIIVGCIA------ 637 (811)
Q Consensus 574 ---h~~~v~~l~~sp~~~~l~s~s~dg-----~v~iwd~~~~~~~~~~~~~--~~v~~~~~spdg~~la~g~~d------ 637 (811)
.......+.+ ++..++.|+.++ .+.+||..+.+-....... ..-.+++. -++++++.|+.+
T Consensus 95 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 95 MRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEE
T ss_pred CCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCcc
Confidence 1111122222 567777777553 5788898877654432222 11122222 266777777653
Q ss_pred -CeEEEEecCCcceeEE--ecCCCCCeEEEEEccCCCEEEEEecC-----CcEEEEEecCCCcceeEEEEecCCCCCeeE
Q psy9770 638 -GRWLVMDSETREAYSI--HTDGNEPIQVVKFSPDGKLLALGSRD-----NYIYVYEVSGDSRKYSRVGRCTGHSSFITH 709 (811)
Q Consensus 638 -g~i~i~d~~~~~~~~~--~~~~~~~i~~i~~spdg~~lasgs~d-----g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~ 709 (811)
..+.+||+.+.+-... +.........+.+ ++++++.|+.+ +.+.+||+.++ .+..+..+......-..
T Consensus 172 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~ 247 (302)
T 2xn4_A 172 LSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTN--AWRQVADMNMCRRNAGV 247 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEE
T ss_pred ccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCC--CEeeCCCCCCccccCeE
Confidence 3588999887643222 2222222222333 67788888764 36888998765 34444332211111222
Q ss_pred EEeCCCCCeEEEecCCc-----eEEEEECCCCc
Q psy9770 710 LDWSEDSMYIRSNSGDY-----ELLYWNAGTCR 737 (811)
Q Consensus 710 l~~spdg~~L~s~s~Dg-----~i~iWd~~~~~ 737 (811)
+.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 248 ~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 248 CAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 222 677777777553 47888887654
No 320
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.12 E-value=0.036 Score=56.83 Aligned_cols=225 Identities=14% Similarity=0.078 Sum_probs=118.5
Q ss_pred CcEEEEecCC--CcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCC----CeEEEEEccCCceeeeeec--
Q psy9770 503 GSIISAGGKD--GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTR----NCILVGSLNLGFSPVVLGH-- 574 (811)
Q Consensus 503 g~~l~s~s~d--g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~----~~i~~~d~~~~~~~~~~~h-- 574 (811)
+.+++.|+.+ ..+.+||...........++....... ++...+..+++|+.+ +.+.+||..+..-..+...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAA-CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCE-EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeE-EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 3455556543 578889988766522222222222222 222333344455433 5788899887643332211
Q ss_pred -ccceEEEEECCCCCeEEEEECC------CeEEEEeCCCCcEEEEecCC--CCeEEEEEcCCCCEEEEEEe---------
Q psy9770 575 -TDELWALAAHPSLSQFLTAGFD------RIVQLWDSMSHSVVWSKDIA--EQAQSATFSPDGSIIIVGCI--------- 636 (811)
Q Consensus 575 -~~~v~~l~~sp~~~~l~s~s~d------g~v~iwd~~~~~~~~~~~~~--~~v~~~~~spdg~~la~g~~--------- 636 (811)
......+.+ ++..++.|+.+ ..+.+||..+.+-....... ..-.+++. -++++++.|+.
T Consensus 91 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 91 PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEE
T ss_pred cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccc
Confidence 111122222 56677777765 46889999887644432221 11122222 26677777764
Q ss_pred CCeEEEEecCCcceeEE--ecCCCCCeEEEEEccCCCEEEEEecC-----CcEEEEEecCCCcceeEEEEecCCCCCeeE
Q psy9770 637 AGRWLVMDSETREAYSI--HTDGNEPIQVVKFSPDGKLLALGSRD-----NYIYVYEVSGDSRKYSRVGRCTGHSSFITH 709 (811)
Q Consensus 637 dg~i~i~d~~~~~~~~~--~~~~~~~i~~i~~spdg~~lasgs~d-----g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~ 709 (811)
...+.+||+.+.+-... +......-..+.+ ++++++.|+.+ ..+.+||+.++ .+..+..+.........
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLN--EWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTT--EEEECCCCSCCBSCCEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCC--cEEECCCCCCCccceeE
Confidence 34588999887643222 2211122222223 67777777654 35888888775 34444333222222333
Q ss_pred EEeCCCCCeEEEecCC-----ceEEEEECCCCc
Q psy9770 710 LDWSEDSMYIRSNSGD-----YELLYWNAGTCR 737 (811)
Q Consensus 710 l~~spdg~~L~s~s~D-----g~i~iWd~~~~~ 737 (811)
+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 244 ~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 244 AAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 333 67777777754 467888887653
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.11 E-value=0.15 Score=55.47 Aligned_cols=101 Identities=18% Similarity=0.180 Sum_probs=61.8
Q ss_pred cCCeEEEeeCCCCeEEEEeCCC-eEEEEEccCCceeeeee---------cccceEEEEECCC---CCeEEEEE-C-----
Q psy9770 535 LGGIRTVSEGRGSQLIVGTTRN-CILVGSLNLGFSPVVLG---------HTDELWALAAHPS---LSQFLTAG-F----- 595 (811)
Q Consensus 535 ~~~v~~l~~~~~~~l~~~~~~~-~i~~~d~~~~~~~~~~~---------h~~~v~~l~~sp~---~~~l~s~s-~----- 595 (811)
....+.+++.+++.++++...+ .|++++...+....+.. ....+..|+|+|+ +..|..+. .
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 3456789999999999998876 68888765443322211 2456789999995 44444333 2
Q ss_pred -------CCeEEEEeCCCC-------cEEEE-ecC--CCCeEEEEEcCCCCEEEEEE
Q psy9770 596 -------DRIVQLWDSMSH-------SVVWS-KDI--AEQAQSATFSPDGSIIIVGC 635 (811)
Q Consensus 596 -------dg~v~iwd~~~~-------~~~~~-~~~--~~~v~~~~~spdg~~la~g~ 635 (811)
...|.-|++... +.+.. +.. ......++|.|||.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555554321 12221 221 23578999999998766644
No 322
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.05 E-value=0.034 Score=56.86 Aligned_cols=226 Identities=12% Similarity=0.111 Sum_probs=118.0
Q ss_pred CCcEEEEec-CC-----CcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCC-----CeEEEEEccCCc---
Q psy9770 502 EGSIISAGG-KD-----GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTR-----NCILVGSLNLGF--- 567 (811)
Q Consensus 502 dg~~l~s~s-~d-----g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~-----~~i~~~d~~~~~--- 567 (811)
++.+++.|+ .+ ..+.+||..+........++..... .+++...+..++.|+.+ +.+.+||..+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRY-VASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhcc-ccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 445566566 33 3688888876654222222221111 22222334444455543 468899987765
Q ss_pred eeeeeec---ccceEEEEECCCCCeEEEEECC-----CeEEEEeCCCCcEEEEecC--CCCeEEEEEcCCCCEEEEEEeC
Q psy9770 568 SPVVLGH---TDELWALAAHPSLSQFLTAGFD-----RIVQLWDSMSHSVVWSKDI--AEQAQSATFSPDGSIIIVGCIA 637 (811)
Q Consensus 568 ~~~~~~h---~~~v~~l~~sp~~~~l~s~s~d-----g~v~iwd~~~~~~~~~~~~--~~~v~~~~~spdg~~la~g~~d 637 (811)
-..+..- ......+.+ ++..++.|+.+ ..+.+||..+.+-...... ...-.+++. -++++++.|+.+
T Consensus 93 W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 169 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYD 169 (301)
T ss_dssp CEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBC
T ss_pred eEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCC
Confidence 3332211 111122222 56677777643 3688999888764433222 111122222 267777777654
Q ss_pred -----CeEEEEecCCcceeEE--ecCCCCCeEEEEEccCCCEEEEEecC-----CcEEEEEecCCCcceeEEEEecCCCC
Q psy9770 638 -----GRWLVMDSETREAYSI--HTDGNEPIQVVKFSPDGKLLALGSRD-----NYIYVYEVSGDSRKYSRVGRCTGHSS 705 (811)
Q Consensus 638 -----g~i~i~d~~~~~~~~~--~~~~~~~i~~i~~spdg~~lasgs~d-----g~I~iwd~~~~~~~~~~~~~~~~h~~ 705 (811)
..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+. .+..+..+.....
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~ 245 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTD--SWTTVTSMTTPRC 245 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT--EEEEECCCSSCCB
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCC--cEEECCCCCCccc
Confidence 3688999887653322 2212222222333 67778887764 46889998775 3444433322222
Q ss_pred CeeEEEeCCCCCeEEEecCC-----ceEEEEECCCCc
Q psy9770 706 FITHLDWSEDSMYIRSNSGD-----YELLYWNAGTCR 737 (811)
Q Consensus 706 ~V~~l~~spdg~~L~s~s~D-----g~i~iWd~~~~~ 737 (811)
....+.+ ++++++.|+.+ ..|.+||+.+.+
T Consensus 246 ~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 246 YVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred ceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 2222333 67777777655 467888887653
No 323
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.03 E-value=0.098 Score=53.53 Aligned_cols=228 Identities=9% Similarity=0.005 Sum_probs=119.4
Q ss_pred EEEEcC--CCcEEEEecCCceEEEEeecccccce-EEEEEecCCcEEEEecCC----CcEEEEeCCCCCccceeeecccc
Q psy9770 463 VLSGDS--NGNIIVWTRGSNTISKFIRNVHEGSV-FSICVLKEGSIISAGGKD----GRLLQFDSNLQPTGYEAQIAEHL 535 (811)
Q Consensus 463 llsg~~--dg~I~vwd~~~~~~~~~~~~~h~~~V-~~l~~s~dg~~l~s~s~d----g~I~~wd~~~~~~~~~~~~~~~~ 535 (811)
++.|+. ...+.+||..+++....-. ...... .+++ .-++.+++.|+.+ ..+.+||..+........++...
T Consensus 15 ~~~GG~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 92 (306)
T 3ii7_A 15 IALFGGSQPQSCRYFNPKDYSWTDIRC-PFEKRRDAACV-FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR 92 (306)
T ss_dssp EEEECCSSTTSEEEEETTTTEEEECCC-CSCCCBSCEEE-EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred EEEeCCCCCceEEEecCCCCCEecCCC-CCcccceeEEE-EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence 335554 3578999998876554322 111111 1222 2367777777755 57888998877653332232222
Q ss_pred CCeEEEeeCCCCeEEEEeCC------CeEEEEEccCCceeeeeec---ccceEEEEECCCCCeEEEEEC---------CC
Q psy9770 536 GGIRTVSEGRGSQLIVGTTR------NCILVGSLNLGFSPVVLGH---TDELWALAAHPSLSQFLTAGF---------DR 597 (811)
Q Consensus 536 ~~v~~l~~~~~~~l~~~~~~------~~i~~~d~~~~~~~~~~~h---~~~v~~l~~sp~~~~l~s~s~---------dg 597 (811)
.....+ ...+..+++|+.+ ..+.+||..+..-..+... ......+.+ ++..++.|+. -.
T Consensus 93 ~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 93 DSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp BSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECC
T ss_pred cceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccc
Confidence 222222 2233344445443 4688899877633322211 111112222 5566666653 34
Q ss_pred eEEEEeCCCCcEEEEecCC--CCeEEEEEcCCCCEEEEEEeC-----CeEEEEecCCcceeE--EecCCCCCeEEEEEcc
Q psy9770 598 IVQLWDSMSHSVVWSKDIA--EQAQSATFSPDGSIIIVGCIA-----GRWLVMDSETREAYS--IHTDGNEPIQVVKFSP 668 (811)
Q Consensus 598 ~v~iwd~~~~~~~~~~~~~--~~v~~~~~spdg~~la~g~~d-----g~i~i~d~~~~~~~~--~~~~~~~~i~~i~~sp 668 (811)
.+.+||..+.+-....... ..-.+++.. ++++++.|+.+ ..+.+||+.+.+-.. .+.........+.+
T Consensus 170 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 246 (306)
T 3ii7_A 170 SCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV-- 246 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--
T ss_pred eEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--
Confidence 5889999887644432222 111222222 66777777654 368899988764222 22222222233333
Q ss_pred CCCEEEEEecC-----CcEEEEEecCCCcceeEEEEe
Q psy9770 669 DGKLLALGSRD-----NYIYVYEVSGDSRKYSRVGRC 700 (811)
Q Consensus 669 dg~~lasgs~d-----g~I~iwd~~~~~~~~~~~~~~ 700 (811)
++++++.|+.+ ..+.+||..+. .+..+..+
T Consensus 247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~ 281 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGRLGHILEYNTETD--KWVANSKV 281 (306)
T ss_dssp TTEEEEEECBCSSSBCCEEEEEETTTT--EEEEEEEE
T ss_pred CCEEEEEeCcCCCeeeeeEEEEcCCCC--eEEeCCCc
Confidence 77788888754 45888888764 35554444
No 324
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.00 E-value=0.052 Score=57.09 Aligned_cols=157 Identities=20% Similarity=0.165 Sum_probs=98.4
Q ss_pred cCCCCEEEEEEeCCeEEEEecCCcceeEEecCC----CCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCccee-----
Q psy9770 625 SPDGSIIIVGCIAGRWLVMDSETREAYSIHTDG----NEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYS----- 695 (811)
Q Consensus 625 spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~----~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~----- 695 (811)
+.+|..++++ .++.|+.-++......+.+... -..|..+..+|+|++||..+ +..|.|..+..+.....
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 3455555554 3577777777644444444432 23688899999999999975 46799999884321100
Q ss_pred ---EEEEec------CCCCCeeEEEeCCC---CCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceee
Q psy9770 696 ---RVGRCT------GHSSFITHLDWSED---SMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIG 763 (811)
Q Consensus 696 ---~~~~~~------~h~~~V~~l~~spd---g~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (811)
....+. ....+|..+.|+|- +..|++-..|+.|++||+........ ..... ...++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-------~L~k~-----~~~fg 174 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-------VLNKP-----NNSFG 174 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-------EESCC-----CSEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-------chhcc-----ccccC
Confidence 111221 13578999999994 56899999999999999986321111 00000 01111
Q ss_pred eCCCCCCCCccceEEecCCCCEEEE--EcCCCcEEEE
Q psy9770 764 IWPEGADGTDVNSCERSHDARVIAT--GDDFGKLKLY 798 (811)
Q Consensus 764 i~~~~~h~~~I~~l~~s~dg~~Las--~~~dg~v~vw 798 (811)
...+...|.+++|..++-.|.. ..+.|.|+-.
T Consensus 175 ---~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 175 ---LDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ---SCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ---CCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 1223467999999998876665 4588877654
No 325
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.96 E-value=0.58 Score=50.81 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=64.3
Q ss_pred cceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeecc------ccCCeEEEeeCC----CCeEEEEeC-------
Q psy9770 492 GSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAE------HLGGIRTVSEGR----GSQLIVGTT------- 554 (811)
Q Consensus 492 ~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~------~~~~v~~l~~~~----~~~l~~~~~------- 554 (811)
.....|+|.|+|+++++-...+.|++++...+.......+.. .......+++.| ++.+++...
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 356799999999988854444579888765443322222221 245667899988 677777653
Q ss_pred ------CCeEEEEEccCC------ceeeee----ecccceEEEEECCCCCeEEEEEC
Q psy9770 555 ------RNCILVGSLNLG------FSPVVL----GHTDELWALAAHPSLSQFLTAGF 595 (811)
Q Consensus 555 ------~~~i~~~d~~~~------~~~~~~----~h~~~v~~l~~sp~~~~l~s~s~ 595 (811)
...|..+++... ...++. ........|+|.|||.++++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 246666765432 111221 11234689999999998777653
No 326
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.86 E-value=0.57 Score=48.76 Aligned_cols=201 Identities=15% Similarity=0.143 Sum_probs=114.4
Q ss_pred CeEEEEEcCCCcEEEEee------------ccCCCCCCCCCeEEEEeCCC--CcEEEEeccCC-----ccccEEEEEEec
Q psy9770 301 DIKCLSIHPNKLLIATGQ------------VAGHDAREGKPHIRIWNSVS--LFTVSIIGIGE-----FERSISCLSFSK 361 (811)
Q Consensus 301 ~V~~la~spdg~~Lasg~------------~dg~~~~~~~~~I~iWd~~t--~~~~~~l~~~~-----h~~~V~~l~fs~ 361 (811)
..-.+++.|+|..+++++ .+| .|.++|..+ ++ ...+.+.+ .......+.+.+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G--------~I~~~d~~~~~~~-~~~l~~~g~~~~~~~f~PhGi~~~~ 121 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSG--------KILLMDLNEKEPA-VSELEIIGNTLDISSFNPHGISTFI 121 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CC--------EEEEEETTSSSCC-EEECEEECSSCCGGGCCEEEEEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCC--------eEEEEecCCCCCc-eEEEEccCCCCCcCceeeeeeEEEE
Confidence 334556778876555542 345 899999873 33 23333323 235677888766
Q ss_pred CCCCc-EEEEEeCC-CCceEEEEEcccCCC-cceEEEeeeC-CCcEEEEEecCCCCCeEEEEC----C------------
Q psy9770 362 ADGGT-FLCAVDEG-NDYNISVWDWQKSDR-GHKITETKCS-VDTVVAAEFHPLDRNNIVTCG----K------------ 421 (811)
Q Consensus 362 ~~dg~-~Lasv~~s-~d~~i~vWd~~~~~~-~~~~~~~~~~-~~~V~~v~fsp~~~~ll~~~~----d------------ 421 (811)
+.+|. +|..+... .+.+|.+|++..... ...+..+.+. -...+.+.+.+++. ++++.. +
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~ 200 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGL 200 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTC
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccC
Confidence 32343 45545333 367899999876531 1123333332 23578899998654 444432 1
Q ss_pred CcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCc-E-EEEcCCCcEEEEecCC-ceEE--EEeecccccceEE
Q psy9770 422 SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE-V-LSGDSNGNIIVWTRGS-NTIS--KFIRNVHEGSVFS 496 (811)
Q Consensus 422 ~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~-l-lsg~~dg~I~vwd~~~-~~~~--~~~~~~h~~~V~~ 496 (811)
..-.+|.++.+ .+.....- -...+.++|+||++ + ++-+..+.|..|++.. +... ..+. ..+....
T Consensus 201 ~~g~vyr~d~~-~~~~~~~~-------l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~--~~g~PDG 270 (355)
T 3sre_A 201 AWSFVTYYSPN-DVRVVAEG-------FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS--FDTLVDN 270 (355)
T ss_dssp CCEEEEEECTT-CCEEEEEE-------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSEEEE
T ss_pred CccEEEEEECC-eEEEeecC-------CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe--CCCCCce
Confidence 23456666533 22221111 12368999999997 3 3666778999999863 3322 2332 2466788
Q ss_pred EEEec-CCcEEEEecCC-CcEEEEeCC
Q psy9770 497 ICVLK-EGSIISAGGKD-GRLLQFDSN 521 (811)
Q Consensus 497 l~~s~-dg~~l~s~s~d-g~I~~wd~~ 521 (811)
+++.+ +|++.+++..+ +.|..|+.+
T Consensus 271 i~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 271 ISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EEEeCCCCcEEEEecCCceEEEEECCC
Confidence 89998 58887755434 355555544
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.84 E-value=0.098 Score=53.66 Aligned_cols=225 Identities=12% Similarity=0.024 Sum_probs=114.4
Q ss_pred CCcEEEEecCC----CcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeC----C-----CeEEEEEccCCce
Q psy9770 502 EGSIISAGGKD----GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTT----R-----NCILVGSLNLGFS 568 (811)
Q Consensus 502 dg~~l~s~s~d----g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~----~-----~~i~~~d~~~~~~ 568 (811)
++.+++.|+.+ ..+.+||..+........++...... +++...+..++.|+. + +.+.++|..+..-
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 45566656532 36788888766552222222211111 222233333444443 2 4678888876633
Q ss_pred eeeee---cccceEEEEECCCCCeEEEEECC-----CeEEEEeCCCCcEEEEecCC--C-CeEEEEEcCCCCEEEEEEeC
Q psy9770 569 PVVLG---HTDELWALAAHPSLSQFLTAGFD-----RIVQLWDSMSHSVVWSKDIA--E-QAQSATFSPDGSIIIVGCIA 637 (811)
Q Consensus 569 ~~~~~---h~~~v~~l~~sp~~~~l~s~s~d-----g~v~iwd~~~~~~~~~~~~~--~-~v~~~~~spdg~~la~g~~d 637 (811)
..+.. .......+.+ ++..++.|+.+ ..+.+||..+.+-....... . ....+.+ ++++++.|+.+
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 178 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFD 178 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCC
Confidence 22211 1111222222 56667776643 36888998877644332221 1 1222222 67777777654
Q ss_pred -----CeEEEEecCCcceeE--EecCCCCCeEEEEEccCCCEEEEEecC-----CcEEEEEecCCCcceeEEEEecCCCC
Q psy9770 638 -----GRWLVMDSETREAYS--IHTDGNEPIQVVKFSPDGKLLALGSRD-----NYIYVYEVSGDSRKYSRVGRCTGHSS 705 (811)
Q Consensus 638 -----g~i~i~d~~~~~~~~--~~~~~~~~i~~i~~spdg~~lasgs~d-----g~I~iwd~~~~~~~~~~~~~~~~h~~ 705 (811)
..+.+||+.+.+-.. .+.........+.+ ++++++.|+.+ ..+.+||+.+. .+..+..+.....
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~ 254 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE--TWTFVAPMKHRRS 254 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT--EEEECCCCSSCCB
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC--cEEECCCCCCCcc
Confidence 468899987664322 12222222233333 77788887764 45889998775 3444333222222
Q ss_pred CeeEEEeCCCCCeEEEecCC-----ceEEEEECCCCc
Q psy9770 706 FITHLDWSEDSMYIRSNSGD-----YELLYWNAGTCR 737 (811)
Q Consensus 706 ~V~~l~~spdg~~L~s~s~D-----g~i~iWd~~~~~ 737 (811)
....+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 255 ~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 255 ALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp SCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 2222222 66777777644 357778876643
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.76 E-value=0.082 Score=57.27 Aligned_cols=249 Identities=12% Similarity=0.085 Sum_probs=135.5
Q ss_pred EEEEcCCCcEEEEecCCceEEEEeecc------------------------cccceE--EEEEe---cCCcEEEEecC-C
Q psy9770 463 VLSGDSNGNIIVWTRGSNTISKFIRNV------------------------HEGSVF--SICVL---KEGSIISAGGK-D 512 (811)
Q Consensus 463 llsg~~dg~I~vwd~~~~~~~~~~~~~------------------------h~~~V~--~l~~s---~dg~~l~s~s~-d 512 (811)
+.+|+..|.|+|+-+.+++.+..+.-. ..+... .+.+. .||++|+.-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 448999999999999999888777400 011111 22222 26778876653 4
Q ss_pred CcEEEEeCCCCCccceeeeccccCCeEEEeeC--C-CCeEEEEeCCCeEEEEEccCCceeeeeecccceEEEEECCCCCe
Q psy9770 513 GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEG--R-GSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQ 589 (811)
Q Consensus 513 g~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~--~-~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~ 589 (811)
..|-..+++..++.....++. ...+..+.+. | .+++++++... +-+ .+.+.. +.+....++
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn-~~~~Hg~~~~~~p~T~yv~~~~e~~-~P~------------pndg~~--~~~~~~~~y 216 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPN-VQAIHGLRLQKVPHTKYVFANAEFI-IPH------------PNDGKV--FDLQDENSY 216 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTT-CSCEEEEEECCSSBCCEEEEEECSC-EES------------SCSSSC--CCTTSTTEE
T ss_pred cceEEEECCcEeeceeEeCCC-CcCcccccccccCCccEEEecceee-ccC------------CCCCcc--cccCChhhc
Confidence 577778887777644444443 3445555543 3 34455544321 110 000010 000001111
Q ss_pred EEEEECCCeEEEEeCCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEeCC---------------eEE-------------
Q psy9770 590 FLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAG---------------RWL------------- 641 (811)
Q Consensus 590 l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg---------------~i~------------- 641 (811)
+.....|..+.+..+.....+..-.+...++|++.++.+.+. .+.
T Consensus 217 -------~~f~~iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~ 289 (638)
T 3sbq_A 217 -------TMYNAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKA 289 (638)
T ss_dssp -------EEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHT
T ss_pred -------eEEEEEcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhc
Confidence 022233445555555544444555555566666666554322 233
Q ss_pred ------------EEecCC----cc-eeEEecCCCCCeEEEEEccCCCEEEEEe-cCCcEEEEEecCCC---------cce
Q psy9770 642 ------------VMDSET----RE-AYSIHTDGNEPIQVVKFSPDGKLLALGS-RDNYIYVYEVSGDS---------RKY 694 (811)
Q Consensus 642 ------------i~d~~~----~~-~~~~~~~~~~~i~~i~~spdg~~lasgs-~dg~I~iwd~~~~~---------~~~ 694 (811)
+.|.+. +. .+..+. -......+.++|||+++++++ -+.++.++++..-. ..-
T Consensus 290 G~~~~~~g~gv~ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~ 368 (638)
T 3sbq_A 290 GDFITLGDSKTPVLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRD 368 (638)
T ss_dssp TCCBCCTTCCCCEEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGG
T ss_pred CCeEEECCCCeeEEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCccc
Confidence 444332 11 111111 112345678999999998876 46789999988411 011
Q ss_pred eEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCC
Q psy9770 695 SRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTC 736 (811)
Q Consensus 695 ~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~ 736 (811)
..+.... -.-.....+|.++|....+..-|..|.-|++...
T Consensus 369 ~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 369 VIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp GEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHH
T ss_pred ceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEeccHH
Confidence 1222333 2345678999999966667778999999999653
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.73 E-value=0.1 Score=53.75 Aligned_cols=221 Identities=10% Similarity=0.050 Sum_probs=113.9
Q ss_pred EEEEecCCCcEEEEeCCCCCccceeeeccc-cCCeEEEeeCCCCeEEEEeC-----C------CeEEEEEccCCceeeee
Q psy9770 505 IISAGGKDGRLLQFDSNLQPTGYEAQIAEH-LGGIRTVSEGRGSQLIVGTT-----R------NCILVGSLNLGFSPVVL 572 (811)
Q Consensus 505 ~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~l~~~~~-----~------~~i~~~d~~~~~~~~~~ 572 (811)
+++.|+ ..+.+||..+.... ...++.. ...-.+++...+..++.|+. . ..+..||..+..-..+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~-~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECY-CASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEE-EEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEe-cCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 344455 57889999877752 2233221 12223344444555556652 1 23778888765332221
Q ss_pred eccc---ceEEEEECCCCCeEEEEECC--------CeEEEEeCCCCcEEEEecCCC--CeEEEEEcCCCCEEEEEEe-C-
Q psy9770 573 GHTD---ELWALAAHPSLSQFLTAGFD--------RIVQLWDSMSHSVVWSKDIAE--QAQSATFSPDGSIIIVGCI-A- 637 (811)
Q Consensus 573 ~h~~---~v~~l~~sp~~~~l~s~s~d--------g~v~iwd~~~~~~~~~~~~~~--~v~~~~~spdg~~la~g~~-d- 637 (811)
.-.. ....+.+ ++..++.|+.+ ..+.+||..+.+-......+. .-.+++. -++++++.|+. +
T Consensus 84 ~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 84 PLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSD 160 (315)
T ss_dssp CBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTT
T ss_pred CCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCC
Confidence 1111 1112222 45666776632 458899998876433322211 1122222 46677777765 2
Q ss_pred ----CeEEEEecCCcceeE--EecCCCCCeEEEEEccCCCEEEEEecCC-----cEEEEEecCCCcceeEEEEecCCCCC
Q psy9770 638 ----GRWLVMDSETREAYS--IHTDGNEPIQVVKFSPDGKLLALGSRDN-----YIYVYEVSGDSRKYSRVGRCTGHSSF 706 (811)
Q Consensus 638 ----g~i~i~d~~~~~~~~--~~~~~~~~i~~i~~spdg~~lasgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h~~~ 706 (811)
..+.+||+.+.+-.. .+.........+.+ ++++++.|+.++ .+.+||+.+. .+..+..+......
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~ 236 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDN--KWAPFEAFPQERSS 236 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTT--EEEEECCCSSCCBS
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCC--eEEECCCCCCcccc
Confidence 368999988764222 12212222222333 778888887654 4788888764 44444333222222
Q ss_pred eeEEEeCCCCCeEEEecCCc--------------eEEEEECCCCc
Q psy9770 707 ITHLDWSEDSMYIRSNSGDY--------------ELLYWNAGTCR 737 (811)
Q Consensus 707 V~~l~~spdg~~L~s~s~Dg--------------~i~iWd~~~~~ 737 (811)
...+.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 237 ~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 237 LSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp CEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred eeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 223333 667777777542 36778877653
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.67 E-value=0.039 Score=57.09 Aligned_cols=242 Identities=10% Similarity=-0.007 Sum_probs=126.9
Q ss_pred CCeEEEEeCCCeEEEEEccCCceeeeeecc--cceEEEEE--CCCCCeEEEE--ECCCeEEEEeCCCCcEEEEecCC---
Q psy9770 546 GSQLIVGTTRNCILVGSLNLGFSPVVLGHT--DELWALAA--HPSLSQFLTA--GFDRIVQLWDSMSHSVVWSKDIA--- 616 (811)
Q Consensus 546 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~--~~v~~l~~--sp~~~~l~s~--s~dg~v~iwd~~~~~~~~~~~~~--- 616 (811)
++.+++++.+|.|+-+|..++...-..... .++....- .+.+..++.+ ..||.|..++..++...+.+...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 467889999999999988776433222111 22222110 0112233333 58999999999888666654322
Q ss_pred --CCeEE---EEE-c----CCCCEEEEEEeCCeEEEEecCCcceeEEecCCCC--C-----eEEEEEc-----cCCCEEE
Q psy9770 617 --EQAQS---ATF-S----PDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNE--P-----IQVVKFS-----PDGKLLA 674 (811)
Q Consensus 617 --~~v~~---~~~-s----pdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~--~-----i~~i~~s-----pdg~~la 674 (811)
.++.. ..+ . ..+..+++|+.+|.+...|+.+|+.+..+..... . ..|.... ..+..|+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 22221 000 0 1456788999999999999999999988864321 0 0111111 1235677
Q ss_pred EEecCCcEEEEEecCCCcceeE-EEEecCCCCC--e-eEEEeCCCCCeEEEecCCceEEEEECCCCcccC-CCCCcccee
Q psy9770 675 LGSRDNYIYVYEVSGDSRKYSR-VGRCTGHSSF--I-THLDWSEDSMYIRSNSGDYELLYWNAGTCRQIP-QSSQLRDVV 749 (811)
Q Consensus 675 sgs~dg~I~iwd~~~~~~~~~~-~~~~~~h~~~--V-~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~-~~~~~~~~~ 749 (811)
.+..+..+.+.+ .++. .+.. ......+... + .+-.++.|+.++ .++.||.|.-+|..+|+.+- .....
T Consensus 170 ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~-~~~~dg~v~A~d~~~G~~~W~~~~l~---- 242 (339)
T 2be1_A 170 IGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCI-APFRDKSLLASDLDFRIARWVSPTFP---- 242 (339)
T ss_dssp EEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCE-EEETTTEEEEECSTTCCEEEECCCCS----
T ss_pred EecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEE-EECCCCEEEEEECCCCcEEEEeecCC----
Confidence 777666666666 3332 3322 1111111110 0 000112356664 46789999999988887653 22110
Q ss_pred EeccceeeccceeeeCCCCCCCCccceEEecC----------CCCEEEEEcCCCcEEEEeCCC
Q psy9770 750 WESNSCTLTFTTIGIWPEGADGTDVNSCERSH----------DARVIATGDDFGKLKLYSYPA 802 (811)
Q Consensus 750 ~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~----------dg~~Las~~~dg~v~vw~~~~ 802 (811)
......++....|.. +..| +.-.| ++++++.-.++|.++.++.+.
T Consensus 243 ---sPv~~~~dv~~~~~~---g~~v--~~~~P~~~~~~~~~~~~~v~v~~t~~G~~~Als~~~ 297 (339)
T 2be1_A 243 ---GIIVGLFDVFNDLRT---NENI--LVPHPFNPGDHESISSNKVYLDQTSNLSWFALSSQN 297 (339)
T ss_dssp ---SCEEEEEEEEEETTT---TEEE--EEECCCCC--------CCEEEEECTTCCEEEEETTT
T ss_pred ---CCeEEEEEEEEecCC---CCEE--EecCCCcccccccccCCeEEEEECCCCcEEEecCCC
Confidence 111112334444421 1111 11122 566666567789999988654
No 331
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=96.67 E-value=0.88 Score=48.29 Aligned_cols=265 Identities=9% Similarity=0.004 Sum_probs=131.9
Q ss_pred CCcEEEEcCCCcEEEEecCC-c-eEEEEeecccccceEEEEEec--CCcEEEEecCCC----cEEEEeCCCCCccceee-
Q psy9770 460 GGEVLSGDSNGNIIVWTRGS-N-TISKFIRNVHEGSVFSICVLK--EGSIISAGGKDG----RLLQFDSNLQPTGYEAQ- 530 (811)
Q Consensus 460 ~g~llsg~~dg~I~vwd~~~-~-~~~~~~~~~h~~~V~~l~~s~--dg~~l~s~s~dg----~I~~wd~~~~~~~~~~~- 530 (811)
++.+++|+..| +.+++... + .....-.......|.+|++.| ++.+.+ ++..| .|...+-..........
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s~D~G~tW~~~~~~ 99 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLM-AARTGHLGPTVFRSDDGGGNWTEATRP 99 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEE-EEEC--CCEEEEEESSTTSCCEECSBC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEE-EecCCCCCccEEEeCCCCCCceECCcc
Confidence 44577888777 55555432 2 222211112345799999998 555555 44444 45444322222211100
Q ss_pred --ecc--------ccCCeEEEeeCC---CCeEEEEeCCCeEEEEEccCCceeeee-------------------ecccce
Q psy9770 531 --IAE--------HLGGIRTVSEGR---GSQLIVGTTRNCILVGSLNLGFSPVVL-------------------GHTDEL 578 (811)
Q Consensus 531 --~~~--------~~~~v~~l~~~~---~~~l~~~~~~~~i~~~d~~~~~~~~~~-------------------~h~~~v 578 (811)
+.. ....|..+++.+ .+.+++++..+.|+..+-....-..+. .....+
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCce
Confidence 111 112466777764 678888887777776543332111111 112357
Q ss_pred EEEEECCC-CCeEEEEECCCeEEEEeCCCCcEEEEecC--------------CCCeEEEEEcCC-CCEEEEEEeCCeEEE
Q psy9770 579 WALAAHPS-LSQFLTAGFDRIVQLWDSMSHSVVWSKDI--------------AEQAQSATFSPD-GSIIIVGCIAGRWLV 642 (811)
Q Consensus 579 ~~l~~sp~-~~~l~s~s~dg~v~iwd~~~~~~~~~~~~--------------~~~v~~~~~spd-g~~la~g~~dg~i~i 642 (811)
.+|.++|. ...|..+..++.|...+- .++.-..... ...+.+++++|+ ...|.++...| |..
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~ 257 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYR 257 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEE
T ss_pred eEEEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEE
Confidence 89999884 345555554444444322 1221111110 124889999986 45677766544 444
Q ss_pred EecCCcceeEEecC--CC---CCeEEEEEccC-CCEEEEEec-----------CCcEEEEEecCCCcceeEEEE-ecCCC
Q psy9770 643 MDSETREAYSIHTD--GN---EPIQVVKFSPD-GKLLALGSR-----------DNYIYVYEVSGDSRKYSRVGR-CTGHS 704 (811)
Q Consensus 643 ~d~~~~~~~~~~~~--~~---~~i~~i~~spd-g~~lasgs~-----------dg~I~iwd~~~~~~~~~~~~~-~~~h~ 704 (811)
.+ ..++....+.. .. ..+..++++|. ...|.++.. ++...||...+++..++.+.. +....
T Consensus 258 s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~ 336 (394)
T 3b7f_A 258 MD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQ 336 (394)
T ss_dssp EE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSS
T ss_pred eC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCcc
Confidence 43 22333333321 11 33567888763 334444432 344677877776666765432 11101
Q ss_pred C----CeeEEEeCCC-CCeEEEecCCceEE
Q psy9770 705 S----FITHLDWSED-SMYIRSNSGDYELL 729 (811)
Q Consensus 705 ~----~V~~l~~spd-g~~L~s~s~Dg~i~ 729 (811)
. ....++++|. ...|+.++.++.|.
T Consensus 337 ~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~ 366 (394)
T 3b7f_A 337 AWLTVKRQAMTADAHAPVGVYFGTTGGEIW 366 (394)
T ss_dssp CCCCCCTBSEEECCSSSCCEEEECTTSCEE
T ss_pred ccceEEEEEEEECCCCCCEEEEEeCCCeEE
Confidence 0 1235788874 34566665555443
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.65 E-value=0.25 Score=50.50 Aligned_cols=220 Identities=15% Similarity=0.144 Sum_probs=111.8
Q ss_pred CcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecC----C-----CcEEEEeCCCCCccceeeeccccCCeEE
Q psy9770 470 GNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK----D-----GRLLQFDSNLQPTGYEAQIAEHLGGIRT 540 (811)
Q Consensus 470 g~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~----d-----g~I~~wd~~~~~~~~~~~~~~~~~~v~~ 540 (811)
..+.+||..+.+....-.......-.+++. -++.+++.|+. + ..+.+||..+........++........
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 117 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV 117 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence 358888888776554321011111112222 26777777776 2 3688899877655222222222122222
Q ss_pred EeeCCCCeEEEEeC-----CCeEEEEEccCCceeeeee---cccceEEEEECCCCCeEEEEECC-----CeEEEEeCCCC
Q psy9770 541 VSEGRGSQLIVGTT-----RNCILVGSLNLGFSPVVLG---HTDELWALAAHPSLSQFLTAGFD-----RIVQLWDSMSH 607 (811)
Q Consensus 541 l~~~~~~~l~~~~~-----~~~i~~~d~~~~~~~~~~~---h~~~v~~l~~sp~~~~l~s~s~d-----g~v~iwd~~~~ 607 (811)
+ ...+..+++|+. ...+.+||..+..-..+.. .......+.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 118 ~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 118 G-VIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp E-EETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred E-EECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 2 223333344432 2468888887653322211 1111122222 56677777654 45889998877
Q ss_pred cEEEEecCC--C-CeEEEEEcCCCCEEEEEEeC-----CeEEEEecCCcceeEE--ecCCCCCeEEEEEccCCCEEEEEe
Q psy9770 608 SVVWSKDIA--E-QAQSATFSPDGSIIIVGCIA-----GRWLVMDSETREAYSI--HTDGNEPIQVVKFSPDGKLLALGS 677 (811)
Q Consensus 608 ~~~~~~~~~--~-~v~~~~~spdg~~la~g~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~i~~spdg~~lasgs 677 (811)
+-....... . ....+.+ ++++++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+
T Consensus 195 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 270 (308)
T 1zgk_A 195 EWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGG 270 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred eEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcC
Confidence 644332211 1 1222233 67777777664 4689999887643222 2211222222332 677888877
Q ss_pred cC-----CcEEEEEecCCCcceeEEEE
Q psy9770 678 RD-----NYIYVYEVSGDSRKYSRVGR 699 (811)
Q Consensus 678 ~d-----g~I~iwd~~~~~~~~~~~~~ 699 (811)
.+ ..+.+||+.+. .+..+..
T Consensus 271 ~~~~~~~~~v~~yd~~~~--~W~~~~~ 295 (308)
T 1zgk_A 271 YDGHTFLDSVECYDPDTD--TWSEVTR 295 (308)
T ss_dssp BCSSCBCCEEEEEETTTT--EEEEEEE
T ss_pred cCCCcccceEEEEcCCCC--EEeecCC
Confidence 54 35778887764 3444433
No 333
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.63 E-value=0.13 Score=52.41 Aligned_cols=213 Identities=12% Similarity=0.136 Sum_probs=109.9
Q ss_pred CcEEEEecCCceEEEEeecccccc-eEEEEEecCCcEEEEecCCC-----cEEEEeCCCCCccceeeeccccCCeEEEee
Q psy9770 470 GNIIVWTRGSNTISKFIRNVHEGS-VFSICVLKEGSIISAGGKDG-----RLLQFDSNLQPTGYEAQIAEHLGGIRTVSE 543 (811)
Q Consensus 470 g~I~vwd~~~~~~~~~~~~~h~~~-V~~l~~s~dg~~l~s~s~dg-----~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~ 543 (811)
..+.+||..+.+....-. ..... -.+++. -++.+++.|+.++ .+.+||..+........++...... +++.
T Consensus 30 ~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~ 106 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAE-LPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL-GAAV 106 (302)
T ss_dssp CCEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE
T ss_pred CcEEEEcCcCCcEeEccc-CCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce-EEEE
Confidence 458888988776544321 11111 112222 3677777787553 5888998776652222222222222 2222
Q ss_pred CCCCeEEEEeCC-----CeEEEEEccCCceeeeeec---ccceEEEEECCCCCeEEEEECC-------CeEEEEeCCCCc
Q psy9770 544 GRGSQLIVGTTR-----NCILVGSLNLGFSPVVLGH---TDELWALAAHPSLSQFLTAGFD-------RIVQLWDSMSHS 608 (811)
Q Consensus 544 ~~~~~l~~~~~~-----~~i~~~d~~~~~~~~~~~h---~~~v~~l~~sp~~~~l~s~s~d-------g~v~iwd~~~~~ 608 (811)
..+..+++|+.+ +.+.+||+.+..-..+... ......+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 107 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 107 LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 334444555543 3577888876633322211 111122222 45666666542 358899998876
Q ss_pred EEEEecCC--CCeEEEEEcCCCCEEEEEEeCC-----eEEEEecCCcceeEE--ecCCCCCeEEEEEccCCCEEEEEecC
Q psy9770 609 VVWSKDIA--EQAQSATFSPDGSIIIVGCIAG-----RWLVMDSETREAYSI--HTDGNEPIQVVKFSPDGKLLALGSRD 679 (811)
Q Consensus 609 ~~~~~~~~--~~v~~~~~spdg~~la~g~~dg-----~i~i~d~~~~~~~~~--~~~~~~~i~~i~~spdg~~lasgs~d 679 (811)
-....... ..-.+++. -++++++.|+.++ .+.+||+.+.+-... +.........+. -++++++.|+.+
T Consensus 185 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~ 261 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDD 261 (302)
T ss_dssp EEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred EEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcC
Confidence 54432221 11122222 2677778877643 688999887643222 211111122222 377778887765
Q ss_pred C-----cEEEEEecCC
Q psy9770 680 N-----YIYVYEVSGD 690 (811)
Q Consensus 680 g-----~I~iwd~~~~ 690 (811)
+ .+.+||..++
T Consensus 262 ~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 262 GSCNLASVEYYNPTTD 277 (302)
T ss_dssp SSSBCCCEEEEETTTT
T ss_pred CCcccccEEEEcCCCC
Confidence 3 4788888764
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.61 E-value=0.22 Score=51.14 Aligned_cols=219 Identities=15% Similarity=0.080 Sum_probs=111.9
Q ss_pred EEEcCCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecC-----C------CcEEEEeCCCCCccceeeec
Q psy9770 464 LSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK-----D------GRLLQFDSNLQPTGYEAQIA 532 (811)
Q Consensus 464 lsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~-----d------g~I~~wd~~~~~~~~~~~~~ 532 (811)
+.|+ ..+.+||..+++....-...........+...++.+++.|+. . ..+..||..+........++
T Consensus 9 ~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 86 (315)
T 4asc_A 9 MISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLP 86 (315)
T ss_dssp EEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBS
T ss_pred EEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCC
Confidence 3555 579999999887654211111123333334457777777773 1 12778888776542222222
Q ss_pred cccCCeEEEeeCCCCeEEEEeC--------CCeEEEEEccCCceeeeee---cccceEEEEECCCCCeEEEEEC-C----
Q psy9770 533 EHLGGIRTVSEGRGSQLIVGTT--------RNCILVGSLNLGFSPVVLG---HTDELWALAAHPSLSQFLTAGF-D---- 596 (811)
Q Consensus 533 ~~~~~v~~l~~~~~~~l~~~~~--------~~~i~~~d~~~~~~~~~~~---h~~~v~~l~~sp~~~~l~s~s~-d---- 596 (811)
...... +++...+..+++|+. .+.+.++|..+..-..+.. .......+. -+++.++.|+. +
T Consensus 87 ~~r~~~-~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 87 SPRCLF-GLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKC 163 (315)
T ss_dssp SCEESC-EEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCB
T ss_pred cchhce-eEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcc
Confidence 111111 222223333444442 1468889987763222211 111111222 24567777775 2
Q ss_pred -CeEEEEeCCCCcEEEEecCCC--CeEEEEEcCCCCEEEEEEeCC-----eEEEEecCCcceeEE--ecCCCCCeEEEEE
Q psy9770 597 -RIVQLWDSMSHSVVWSKDIAE--QAQSATFSPDGSIIIVGCIAG-----RWLVMDSETREAYSI--HTDGNEPIQVVKF 666 (811)
Q Consensus 597 -g~v~iwd~~~~~~~~~~~~~~--~v~~~~~spdg~~la~g~~dg-----~i~i~d~~~~~~~~~--~~~~~~~i~~i~~ 666 (811)
..+.+||..+.+-........ .-.+++. -++++++.|+.++ .+.+||+.+.+-... +.........+.+
T Consensus 164 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 242 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL 242 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred cceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE
Confidence 468999988775443322211 1112222 2677888887654 588999887643222 2212222223333
Q ss_pred ccCCCEEEEEecCC--------------cEEEEEecCC
Q psy9770 667 SPDGKLLALGSRDN--------------YIYVYEVSGD 690 (811)
Q Consensus 667 spdg~~lasgs~dg--------------~I~iwd~~~~ 690 (811)
++++++.|+.++ .|.+||+.+.
T Consensus 243 --~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 243 --VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp --TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred --CCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 677778777532 3667777654
No 335
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.59 E-value=0.081 Score=55.63 Aligned_cols=154 Identities=20% Similarity=0.218 Sum_probs=94.5
Q ss_pred cCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCC--ccccEEEEEEecCCCCcEEEEEeCCCCceEEEEEcc
Q psy9770 308 HPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGE--FERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQ 385 (811)
Q Consensus 308 spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~--h~~~V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~ 385 (811)
..+|..|+.+.. . .||.-++.....-+.+.+.. --..|..+..|| +|++||. ..++.|.|-.+.
T Consensus 29 ~~n~t~i~~a~~-n--------~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp--sG~lLAl---~g~~~V~Vv~LP 94 (452)
T 3pbp_A 29 SQNGTRIVFIQD-N--------IIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST--SGDLLCL---FNDNEIFVMEVP 94 (452)
T ss_dssp ETTTTEEEEEET-T--------EEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT--TSSEEEE---ECSSEEEEEECC
T ss_pred EcCCCEEEEEEC-C--------EEEEEECCCCCcceEEecCcccccCceeEEEECC--CCCEEEE---ecCCeEEEEEec
Confidence 345555555543 2 67777776444445554332 122577899999 9999998 457789998887
Q ss_pred cCC---Cc------ceEEEeee------CCCcEEEEEecCC---CCCeEEEECCCcEEEEEEcCCce----eeeeccccc
Q psy9770 386 KSD---RG------HKITETKC------SVDTVVAAEFHPL---DRNNIVTCGKSHINFWTIDAGGT----LYKKQGIFE 443 (811)
Q Consensus 386 ~~~---~~------~~~~~~~~------~~~~V~~v~fsp~---~~~ll~~~~d~~i~iwd~~~~~~----~~~~~~~~~ 443 (811)
.+. .. .....+.- ...+|..+.|||- +..+++...|+.|++||+..... +.+....|.
T Consensus 95 ~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg 174 (452)
T 3pbp_A 95 WGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFG 174 (452)
T ss_dssp TTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEE
T ss_pred CccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccC
Confidence 332 10 11223332 2467999999996 45688888999999999985321 111111121
Q ss_pred ccCCCCceEEEEEEcCCCc-EEE--EcCCCcEEEEe
Q psy9770 444 MIRDKPKYVTCLAFTQGGE-VLS--GDSNGNIIVWT 476 (811)
Q Consensus 444 ~l~~~~~~v~~l~~s~~g~-lls--g~~dg~I~vwd 476 (811)
. ......|.+++|..++- +.. .+.+|.|+-.-
T Consensus 175 ~-d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 175 L-DARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp S-CSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred C-CcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 1 22336688999988665 333 44667776554
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.58 E-value=0.039 Score=57.07 Aligned_cols=189 Identities=13% Similarity=0.070 Sum_probs=107.1
Q ss_pred CcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEe---cCCcEEEEe-cCCCcEEEEeCCCCCccceeeeccc--
Q psy9770 461 GEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVL---KEGSIISAG-GKDGRLLQFDSNLQPTGYEAQIAEH-- 534 (811)
Q Consensus 461 g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s---~dg~~l~s~-s~dg~I~~wd~~~~~~~~~~~~~~~-- 534 (811)
+.++.++.||.|+-+|..+|+....+......++....-. .++..++.. ..||.|..++...+.......++..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 4577999999999999999999988873311233221100 133444433 5899999999877654333332221
Q ss_pred cCCeEEE---------eeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccc--------eEEEEEC-----CCCCeEEE
Q psy9770 535 LGGIRTV---------SEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDE--------LWALAAH-----PSLSQFLT 592 (811)
Q Consensus 535 ~~~v~~l---------~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~--------v~~l~~s-----p~~~~l~s 592 (811)
..++..- ..+.++.+++++.++.++..|+.++...-......+ ..|.... -.+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 1122210 012678899999999999999988855433322211 0011110 12356777
Q ss_pred EECCCeEEEEeCCCCcEEEEecCCC----CeE-----EEEEcCCCCEEEEEEeCCeEEEEecCCcceeE
Q psy9770 593 AGFDRIVQLWDSMSHSVVWSKDIAE----QAQ-----SATFSPDGSIIIVGCIAGRWLVMDSETREAYS 652 (811)
Q Consensus 593 ~s~dg~v~iwd~~~~~~~~~~~~~~----~v~-----~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~ 652 (811)
+..+..+.+.+ .+++ ++...... .+. +-.++.|+.+ ++++.||.|.-+|..+|+.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77777777766 4454 33321100 000 0001234666 557889999999999888765
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.57 E-value=0.062 Score=51.13 Aligned_cols=144 Identities=14% Similarity=0.127 Sum_probs=84.6
Q ss_pred cceEEEEECCCCCeEEEEECCCeEEEEeCCCCcE------EEEecC--CCCeEEEEEcCCCCEEEEEEeCCeEEEEecCC
Q psy9770 576 DELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSV------VWSKDI--AEQAQSATFSPDGSIIIVGCIAGRWLVMDSET 647 (811)
Q Consensus 576 ~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~------~~~~~~--~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~ 647 (811)
..+..++|+|++.+.+. .+|.+.-.+..+... -..+.. -....++.|.|+|.+.++ .||.|+-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 47779999999987776 677766666544211 111110 011478899999998888 679998887643
Q ss_pred cce-------eEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCC-ccee-EEEEe-cCCCCCeeEEEeCCCCC
Q psy9770 648 REA-------YSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDS-RKYS-RVGRC-TGHSSFITHLDWSEDSM 717 (811)
Q Consensus 648 ~~~-------~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~-~~~~-~~~~~-~~h~~~V~~l~~spdg~ 717 (811)
... ...-...-..+..|.|.|+|.+.|+. |+.++-.....+. ..+- ....+ .+.-..-+.+.|.+++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 211 11112222568999999999988776 7775433222111 1110 00111 12233445577999998
Q ss_pred eEEEecCCce
Q psy9770 718 YIRSNSGDYE 727 (811)
Q Consensus 718 ~L~s~s~Dg~ 727 (811)
+.++. +|.
T Consensus 195 l~~v~--~g~ 202 (236)
T 1tl2_A 195 LFGVQ--GGK 202 (236)
T ss_dssp EEEEE--TTE
T ss_pred EEEEe--CCe
Confidence 87776 663
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.55 E-value=0.12 Score=54.28 Aligned_cols=233 Identities=8% Similarity=0.021 Sum_probs=115.0
Q ss_pred CCcEEEEecCC-CcEEEEeCCC--CCccceeeeccccCCeEEEeeCCCCeEEEEeC----------CCeEEEEEccCCce
Q psy9770 502 EGSIISAGGKD-GRLLQFDSNL--QPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTT----------RNCILVGSLNLGFS 568 (811)
Q Consensus 502 dg~~l~s~s~d-g~I~~wd~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~----------~~~i~~~d~~~~~~ 568 (811)
++.+++.|+.+ ..+.+||... ........++.....-.+++...+..+++|+. .+.+.+||..+..-
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 66666666643 4688888864 33312222221111112222233333444443 14688899877633
Q ss_pred eeeeecc---cceEEEEECCCCCeEEEEECC---------------------------------------CeEEEEeCCC
Q psy9770 569 PVVLGHT---DELWALAAHPSLSQFLTAGFD---------------------------------------RIVQLWDSMS 606 (811)
Q Consensus 569 ~~~~~h~---~~v~~l~~sp~~~~l~s~s~d---------------------------------------g~v~iwd~~~ 606 (811)
..+.... ..-.+++. .++++++.|+.+ ..+.+||..+
T Consensus 99 ~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 177 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPST 177 (357)
T ss_dssp EECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTT
T ss_pred EECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCC
Confidence 3222111 11112222 457777888754 5789999988
Q ss_pred CcEEEEecCC--CCe-EEEEEcCCCCEEEEEEe------CCeEEEEec--CCcc--eeEEecCCCCCeEEEEEccCCCEE
Q psy9770 607 HSVVWSKDIA--EQA-QSATFSPDGSIIIVGCI------AGRWLVMDS--ETRE--AYSIHTDGNEPIQVVKFSPDGKLL 673 (811)
Q Consensus 607 ~~~~~~~~~~--~~v-~~~~~spdg~~la~g~~------dg~i~i~d~--~~~~--~~~~~~~~~~~i~~i~~spdg~~l 673 (811)
.+-....... ... .+++. -++++++.|+. ...+.+||+ .+.+ .+..+..........+...+++++
T Consensus 178 ~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iy 256 (357)
T 2uvk_A 178 QQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLI 256 (357)
T ss_dssp TEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEE
T ss_pred CcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEE
Confidence 7644432222 122 23333 25667777654 335777876 3332 121121111111222233467777
Q ss_pred EEEecC----------------------CcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCc-----
Q psy9770 674 ALGSRD----------------------NYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDY----- 726 (811)
Q Consensus 674 asgs~d----------------------g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg----- 726 (811)
+.|+.+ ..+.+||+.+. .+..+..+......-.++. -++++++.|+.++
T Consensus 257 v~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~ 332 (357)
T 2uvk_A 257 FAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG--KWDKSGELSQGRAYGVSLP--WNNSLLIIGGETAGGKAV 332 (357)
T ss_dssp EECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEEEE--ETTEEEEEEEECGGGCEE
T ss_pred EEcCccccCCcccccccceeccccccceeeEEEEecCCC--ceeeCCCCCCCcccceeEE--eCCEEEEEeeeCCCCCEe
Confidence 777632 24778888765 4555555543333222333 3678888887543
Q ss_pred -eEEEEECCCCcccC
Q psy9770 727 -ELLYWNAGTCRQIP 740 (811)
Q Consensus 727 -~i~iWd~~~~~~~~ 740 (811)
.|.++++++++.+.
T Consensus 333 ~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 333 TDSVLITVKDNKVTV 347 (357)
T ss_dssp EEEEEEEC-CCSCEE
T ss_pred eeEEEEEEcCcEeEe
Confidence 46666888777554
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.54 E-value=0.19 Score=51.76 Aligned_cols=209 Identities=11% Similarity=0.086 Sum_probs=104.1
Q ss_pred EEEEecCCCcEEEEeCCCCCccceeeecc-ccCCeEEEeeCCCCeEEEEeC----CC-------eEEEEEccCCceeeee
Q psy9770 505 IISAGGKDGRLLQFDSNLQPTGYEAQIAE-HLGGIRTVSEGRGSQLIVGTT----RN-------CILVGSLNLGFSPVVL 572 (811)
Q Consensus 505 ~l~s~s~dg~I~~wd~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~l~~~~~----~~-------~i~~~d~~~~~~~~~~ 572 (811)
+++.|+. .+..||..+.+... ...+. ....-.+++...+..++.|+. ++ .+.++|..+..-..+.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 4444553 37888988776522 22221 112223344444455555652 11 2777887765332221
Q ss_pred ec---ccceEEEEECCCCCeEEEEECC-------CeEEEEeCCCCcEEEEecCCCCe--EEEEEcCCCCEEEEEEeC---
Q psy9770 573 GH---TDELWALAAHPSLSQFLTAGFD-------RIVQLWDSMSHSVVWSKDIAEQA--QSATFSPDGSIIIVGCIA--- 637 (811)
Q Consensus 573 ~h---~~~v~~l~~sp~~~~l~s~s~d-------g~v~iwd~~~~~~~~~~~~~~~v--~~~~~spdg~~la~g~~d--- 637 (811)
.. ......+.+ ++..++.|+.+ ..+.+||..+.+-......+.+. .+++. .++++++.|+.+
T Consensus 95 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 95 PLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDK 171 (318)
T ss_dssp CBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSS
T ss_pred CCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCC
Confidence 11 111122222 56677777754 35888898877654432222211 12222 467777777642
Q ss_pred ---CeEEEEecCCcceeEE--ecCCCCCeEEEEEccCCCEEEEEecC-----CcEEEEEecCCCcceeEEEEecCCCCCe
Q psy9770 638 ---GRWLVMDSETREAYSI--HTDGNEPIQVVKFSPDGKLLALGSRD-----NYIYVYEVSGDSRKYSRVGRCTGHSSFI 707 (811)
Q Consensus 638 ---g~i~i~d~~~~~~~~~--~~~~~~~i~~i~~spdg~~lasgs~d-----g~I~iwd~~~~~~~~~~~~~~~~h~~~V 707 (811)
..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+. .+..+..+.......
T Consensus 172 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~ 247 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTN--KWEVMTEFPQERSSI 247 (318)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTC--CEEECCCCSSCCBSC
T ss_pred CccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCC--eEEECCCCCCcccce
Confidence 3589999887653222 2222222222333 67777887654 34778887764 344443332222222
Q ss_pred eEEEeCCCCCeEEEecCC
Q psy9770 708 THLDWSEDSMYIRSNSGD 725 (811)
Q Consensus 708 ~~l~~spdg~~L~s~s~D 725 (811)
..+.+ ++++++.|+.+
T Consensus 248 ~~~~~--~~~i~v~GG~~ 263 (318)
T 2woz_A 248 SLVSL--AGSLYAIGGFA 263 (318)
T ss_dssp EEEEE--TTEEEEECCBC
T ss_pred EEEEE--CCEEEEECCee
Confidence 22222 56677776653
No 340
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.53 E-value=0.84 Score=46.40 Aligned_cols=220 Identities=8% Similarity=0.009 Sum_probs=126.3
Q ss_pred EEccCCcEEEEec----cEEEEEeCCCCceEEeccCCCCeEEEEEcCCCcEEEEeeccCC-C-CC----CCCCeEEEEeC
Q psy9770 267 YLLPTGEIVYFVA----AVAVLYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGH-D-AR----EGKPHIRIWNS 336 (811)
Q Consensus 267 ~~spdg~~l~~~~----~~i~i~d~~~~~~~~~~~h~~~V~~la~spdg~~Lasg~~dg~-~-~~----~~~~~I~iWd~ 336 (811)
.|+.+|..||+.. +.|...+.+....+.+... .+--|+++|.+|........ + .. .....|+..++
T Consensus 20 ~~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 20 LFCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp CEEEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 4667888888883 6888888888776666543 24566899999988765320 0 00 01237888888
Q ss_pred CCCcEEEEeccCCccccEEEEEEecCCCCcEEEEEe--CCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCC
Q psy9770 337 VSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVD--EGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRN 414 (811)
Q Consensus 337 ~t~~~~~~l~~~~h~~~V~~l~fs~~~dg~~Lasv~--~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ 414 (811)
...+...... . . +..|++ +|++|+... ......|..-++.... ...+..+.. ..|+++++.
T Consensus 96 dg~~~~~l~~--~---~--~~~~s~--~g~~Iy~~~~~~~~~~~Iy~~~~dGs~----~~~lt~~~~----~~~~~~g~~ 158 (302)
T 3s25_A 96 NGHGSTVLDP--D---P--CIYASL--IGNYIYYLHYDTQTATSLYRIRIDGEE----KKKIKNHYL----FTCNTSDRY 158 (302)
T ss_dssp TSCCCEEEEC--S---C--EEEEEE--ETTEEEEEEESSSSCEEEEEEETTSCC----CEEEESSCC----CCSEEETTE
T ss_pred CCCcceEeec--C---C--ccEEEE--eCCEEEEEeecCCCCceEEEEECCCCC----eEEEeCCCc----eEeeEECCE
Confidence 8776444332 1 1 236788 778888643 1345667777776443 334443332 456777888
Q ss_pred eEEEEC-CCcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcE-E-EEcCC-CcEEEEecCCceEEEEeeccc
Q psy9770 415 NIVTCG-KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEV-L-SGDSN-GNIIVWTRGSNTISKFIRNVH 490 (811)
Q Consensus 415 ll~~~~-d~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~l-l-sg~~d-g~I~vwd~~~~~~~~~~~~~h 490 (811)
++.+.. ...|...+++ +...... +. + . .. ..+.|++.. + +-..+ ..|..-++....... +.
T Consensus 159 iy~t~~g~~~Iy~~~l~-g~~~~~l---~~---~-~--~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~-Lt--- 223 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTA-SQSEALF---YD---C-N--CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVV-LT--- 223 (302)
T ss_dssp EEEECTTTCCEEEEETT-TTEEEEE---EC---S-C--EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEE-CS---
T ss_pred EEEEeCCCceEEEEECC-CCCEEEE---eC---C-C--cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEE-Ee---
Confidence 877765 4667776766 3332222 11 1 1 11 235587773 3 43333 467777777655333 22
Q ss_pred ccceEEEEEecCCcEEEEec--CCCcEEEEeCCCCC
Q psy9770 491 EGSVFSICVLKEGSIISAGG--KDGRLLQFDSNLQP 524 (811)
Q Consensus 491 ~~~V~~l~~s~dg~~l~s~s--~dg~I~~wd~~~~~ 524 (811)
...+ ..|+|++..|+-+. ..+.|..-+++...
T Consensus 224 ~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 224 EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTG 257 (302)
T ss_dssp CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCCc
Confidence 2233 23677787777542 23566666665543
No 341
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.37 E-value=0.23 Score=47.22 Aligned_cols=145 Identities=13% Similarity=0.097 Sum_probs=90.5
Q ss_pred CCeEEEeeCCCCeEEEEeCCCeEEEEEccCCceeeeeecccc--------eEEEEECCCCCeEEEEECCCeEEEEeCCCC
Q psy9770 536 GGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDE--------LWALAAHPSLSQFLTAGFDRIVQLWDSMSH 607 (811)
Q Consensus 536 ~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~h~~~--------v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~ 607 (811)
..+..+++.|++.|++. .++.++..+..+.......+-... ..++.|.|++.+.++ .||.|.-++-.+.
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 46779999999999888 888888888655322222211222 478999999998887 5699988875332
Q ss_pred c-EEE-----Eec--CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcc------eeEE-ecCCCCCeEEEEEccCCCE
Q psy9770 608 S-VVW-----SKD--IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETRE------AYSI-HTDGNEPIQVVKFSPDGKL 672 (811)
Q Consensus 608 ~-~~~-----~~~--~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~------~~~~-~~~~~~~i~~i~~spdg~~ 672 (811)
. .-+ .+. .=..+..+.|.|+|.+.++. +|.++-....+.. .... ....-.....+.|.++|.+
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l 195 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL 195 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcE
Confidence 1 111 011 11367999999999988877 7876443322211 1111 1123334555779999988
Q ss_pred EEEEecCCcEEEEEecC
Q psy9770 673 LALGSRDNYIYVYEVSG 689 (811)
Q Consensus 673 lasgs~dg~I~iwd~~~ 689 (811)
.++. ++ ++|....
T Consensus 196 ~~v~--~g--~~Y~~~~ 208 (236)
T 1tl2_A 196 FGVQ--GG--KFYEDYP 208 (236)
T ss_dssp EEEE--TT--EEEEESC
T ss_pred EEEe--CC--eEEecCC
Confidence 7775 66 4555443
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.36 E-value=0.056 Score=56.81 Aligned_cols=197 Identities=11% Similarity=0.126 Sum_probs=98.7
Q ss_pred CCCeEEEEEC-C---------CeEEEEeCCCCcEEEEecCC---CCeEEEEEcCCCCEEEEEEeC---------------
Q psy9770 586 SLSQFLTAGF-D---------RIVQLWDSMSHSVVWSKDIA---EQAQSATFSPDGSIIIVGCIA--------------- 637 (811)
Q Consensus 586 ~~~~l~s~s~-d---------g~v~iwd~~~~~~~~~~~~~---~~v~~~~~spdg~~la~g~~d--------------- 637 (811)
++.+++.|+. + ..+.+||..+.+-....... ..-.+++. .++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~ 143 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAG 143 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcC
Confidence 4667777765 2 46889998887644332211 11222233 577788888754
Q ss_pred ------------------------CeEEEEecCCcce--eEEecCCCCCeEEEEEccCCCEEEEEec------CCcEEEE
Q psy9770 638 ------------------------GRWLVMDSETREA--YSIHTDGNEPIQVVKFSPDGKLLALGSR------DNYIYVY 685 (811)
Q Consensus 638 ------------------------g~i~i~d~~~~~~--~~~~~~~~~~i~~i~~spdg~~lasgs~------dg~I~iw 685 (811)
..+.+||+.+.+- +..+......-.+++. -++++++.|+. ...+.+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~ 222 (357)
T 2uvk_A 144 KDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFEL 222 (357)
T ss_dssp TCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEE
T ss_pred CcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEE
Confidence 5789999887642 2222211111122222 26677777664 3457788
Q ss_pred EecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCC----------------------ceEEEEECCCCcccCCCC
Q psy9770 686 EVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGD----------------------YELLYWNAGTCRQIPQSS 743 (811)
Q Consensus 686 d~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~D----------------------g~i~iWd~~~~~~~~~~~ 743 (811)
+++.....+..+..+........+.+...++++++.|+.+ ..+.+||+.+.+
T Consensus 223 d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~------ 296 (357)
T 2uvk_A 223 DFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK------ 296 (357)
T ss_dssp ECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---------
T ss_pred EecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc------
Confidence 8743334455443332222211111222366777777632 246677776543
Q ss_pred CccceeEeccceeeccceeeeCCCCCCCCccceEEecCCCCEEEEEcCCC------cEEEEeCCCCCCCCcc
Q psy9770 744 QLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFG------KLKLYSYPAVQPKLCL 809 (811)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s~dg~~Las~~~dg------~v~vw~~~~~~~~~~~ 809 (811)
|... .-.+.. . ....+...++++++.|+.++ .|.+++++..+.....
T Consensus 297 ------W~~~---------~~~p~~--r--~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 297 ------WDKS---------GELSQG--R--AYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp ------CEEE---------EECSSC--C--BSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred ------eeeC---------CCCCCC--c--ccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 1110 000111 1 11122334788888888543 4667798888776544
No 343
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.28 E-value=0.17 Score=61.19 Aligned_cols=254 Identities=10% Similarity=0.056 Sum_probs=152.5
Q ss_pred CcEEEEEEcCCceeeeecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCceEEEEeecccccceEEEEEec
Q psy9770 422 SHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLK 501 (811)
Q Consensus 422 ~~i~iwd~~~~~~~~~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~ 501 (811)
..|.|.|+..+..+.+. +-..-+.-.+|..++++--...++.|||+++...++.+. ...+|.--.|..
T Consensus 48 ~~vvIidl~~~~~~~rr----------pi~AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~--~~e~VvfWkWis 115 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRR----------PISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT--MTDDVTFWKWIS 115 (1630)
T ss_pred ceEEEEECCCCCCcccc----------cccchhhccCCCcceEEEecCCeEEEeehHHhhhhcccc--cCCCceEEEecC
Confidence 36777777755444221 111234556777777655567899999999888777765 345676677765
Q ss_pred CCcEEEEecCCCcEEEEeCCCCCccceeeeccc----cCCeEEEeeCCCCe--EEEE------eCCCeEEEEEccCCcee
Q psy9770 502 EGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEH----LGGIRTVSEGRGSQ--LIVG------TTRNCILVGSLNLGFSP 569 (811)
Q Consensus 502 dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~----~~~v~~l~~~~~~~--l~~~------~~~~~i~~~d~~~~~~~ 569 (811)
+..+-+ . .+..|+-|++..... ....+..| ...|.....+++.. +++| .-.|.+.+|..+.+..+
T Consensus 116 ~~~l~l-V-T~~aVyHW~~~~~s~-P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ 192 (1630)
T 1xi4_A 116 LNTVAL-V-TDNAVYHWSMEGESQ-PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ 192 (1630)
T ss_pred CCeeEE-E-cCCeEEEeccCCCCc-cHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch
Confidence 544333 2 256899999964322 22222222 22344444445433 2233 23478999999999999
Q ss_pred eeeecccceEEEEEC--CCCC-eEEEEEC---CCeEEEEeCCCC---cEEEE-------ec---CCCCeEEEEEcCCCCE
Q psy9770 570 VVLGHTDELWALAAH--PSLS-QFLTAGF---DRIVQLWDSMSH---SVVWS-------KD---IAEQAQSATFSPDGSI 630 (811)
Q Consensus 570 ~~~~h~~~v~~l~~s--p~~~-~l~s~s~---dg~v~iwd~~~~---~~~~~-------~~---~~~~v~~~~~spdg~~ 630 (811)
.+.||.+....+... +... .++.+.. .+.+.|.++... ..... +. ...-..++..++.-..
T Consensus 193 ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~ 272 (1630)
T 1xi4_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (1630)
T ss_pred hhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCE
Confidence 999998776555543 2222 3333322 268899888543 11110 11 1223456777887778
Q ss_pred EEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCC
Q psy9770 631 IIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGD 690 (811)
Q Consensus 631 la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~ 690 (811)
+..-+.-|.+++||+.++.++..-+-....|...+......-++.....|.|.-..+...
T Consensus 273 iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 273 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred EEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccc
Confidence 888999999999999999988766655555555544443333444446666666666553
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.24 E-value=0.63 Score=47.67 Aligned_cols=215 Identities=13% Similarity=0.084 Sum_probs=107.4
Q ss_pred cEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecC----CC-------cEEEEeCCCCCccceeeeccccCCeE
Q psy9770 471 NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK----DG-------RLLQFDSNLQPTGYEAQIAEHLGGIR 539 (811)
Q Consensus 471 ~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~----dg-------~I~~wd~~~~~~~~~~~~~~~~~~v~ 539 (811)
.+.+||..+++....-...........+...++.+++.|+. ++ .+..||..+........++..... .
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-F 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-C
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-c
Confidence 38899998887655221111122223334456777777873 12 177888876655222222222111 2
Q ss_pred EEeeCCCCeEEEEeCC-------CeEEEEEccCCceeeeeecccce--EEEEECCCCCeEEEEEC------CCeEEEEeC
Q psy9770 540 TVSEGRGSQLIVGTTR-------NCILVGSLNLGFSPVVLGHTDEL--WALAAHPSLSQFLTAGF------DRIVQLWDS 604 (811)
Q Consensus 540 ~l~~~~~~~l~~~~~~-------~~i~~~d~~~~~~~~~~~h~~~v--~~l~~sp~~~~l~s~s~------dg~v~iwd~ 604 (811)
+++...+..+++|+.+ +.+.+||..+..-..+.....+. .+++. .++..++.|+. -..+.+||.
T Consensus 104 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 104 GLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp EEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEET
T ss_pred ceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcC
Confidence 2222334444555542 35788888775333222111110 11222 35666677664 235899999
Q ss_pred CCCcEEEEecCC--CCeEEEEEcCCCCEEEEEEeC-----CeEEEEecCCcceeEE--ecCCCCCeEEEEEccCCCEEEE
Q psy9770 605 MSHSVVWSKDIA--EQAQSATFSPDGSIIIVGCIA-----GRWLVMDSETREAYSI--HTDGNEPIQVVKFSPDGKLLAL 675 (811)
Q Consensus 605 ~~~~~~~~~~~~--~~v~~~~~spdg~~la~g~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~i~~spdg~~las 675 (811)
.+.+-....... ..-.+++. -++++++.|+.+ ..+.+||+.+.+-... +.........+. -++++++.
T Consensus 183 ~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~ 259 (318)
T 2woz_A 183 KKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAGSLYAI 259 (318)
T ss_dssp TTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETTEEEEE
T ss_pred CCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE--ECCEEEEE
Confidence 887644432221 11122222 266777777654 3577899887653221 221222222222 36677777
Q ss_pred EecC--------------CcEEEEEecCC
Q psy9770 676 GSRD--------------NYIYVYEVSGD 690 (811)
Q Consensus 676 gs~d--------------g~I~iwd~~~~ 690 (811)
|+.+ ..+.+||+.+.
T Consensus 260 GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 260 GGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp CCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred CCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 7654 34667776654
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.16 E-value=0.41 Score=58.05 Aligned_cols=266 Identities=12% Similarity=0.121 Sum_probs=155.5
Q ss_pred CcEEEEEe-CCCCceEEEEEcccCCCcceEEEeeeCCCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceeeeeccccc
Q psy9770 365 GTFLCAVD-EGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFE 443 (811)
Q Consensus 365 g~~Lasv~-~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~~~~~~~~ 443 (811)
.++++.-. .+...+|.|-|+..+. .+.+-. -.--+.-.+|. ..+++.-...++.++++++...+...
T Consensus 35 Dkyicvre~~~~~~~vvIidl~~~~---~~~rrp---i~AdsAIMnP~-~~iiALrag~~lQiFnl~~k~klks~----- 102 (1630)
T 1xi4_A 35 DKFICIREKVGEQAQVVIIDMNDPS---NPIRRP---ISADSAIMNPA-SKVIALKAGKTLQIFNIEMKSKMKAH----- 102 (1630)
T ss_pred CceEEEEecCCCCceEEEEECCCCC---Cccccc---ccchhhccCCC-cceEEEecCCeEEEeehHHhhhhccc-----
Confidence 36666532 2334488999998876 332211 11223445774 45566556788999999965555432
Q ss_pred ccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCc-eEEEEeeccc----ccceEEEEEecCCcEEEEec-------C
Q psy9770 444 MIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSN-TISKFIRNVH----EGSVFSICVLKEGSIISAGG-------K 511 (811)
Q Consensus 444 ~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~-~~~~~~~~~h----~~~V~~l~~s~dg~~l~s~s-------~ 511 (811)
..+..|.-=.|..+..+... .+..|+-|++.+. .+.+.+. .| ...|..-..+++.++++..| -
T Consensus 103 ---~~~e~VvfWkWis~~~l~lV-T~~aVyHW~~~~~s~P~k~fd-R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v 177 (1630)
T 1xi4_A 103 ---TMTDDVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFD-RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV 177 (1630)
T ss_pred ---ccCCCceEEEecCCCeeEEE-cCCeEEEeccCCCCccHHHHh-cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcc
Confidence 22344666677766654322 2457999999742 3333333 33 45677777788888877443 3
Q ss_pred CCcEEEEeCCCCCccceeeeccccCCeEEEeeC---CCCeEEEEeC----CCeEEEEEccCC--cee--------eee--
Q psy9770 512 DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEG---RGSQLIVGTT----RNCILVGSLNLG--FSP--------VVL-- 572 (811)
Q Consensus 512 dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~---~~~~l~~~~~----~~~i~~~d~~~~--~~~--------~~~-- 572 (811)
.|.+.+|..+.+.. ..+.+|.+....+... ....+++-.. .+.+++.++... ... ...
T Consensus 178 ~G~mQLyS~er~~s---Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~ 254 (1630)
T 1xi4_A 178 VGAMQLYSVDRKVS---QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP 254 (1630)
T ss_pred cceeeeeecccccc---hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCc
Confidence 57889998876544 5666666655444422 2234444322 368888887542 000 011
Q ss_pred -ecccceEEEEECCCCCeEEEEECCCeEEEEeCCCCcEEEEecC-CCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcce
Q psy9770 573 -GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDI-AEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREA 650 (811)
Q Consensus 573 -~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~ 650 (811)
...+-..++..++.-..+...+.-|.|.++|+.++.++..-.. ...|...+......-+++....|.|.-..+.....
T Consensus 255 ~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~i 334 (1630)
T 1xi4_A 255 EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (1630)
T ss_pred ccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchh
Confidence 1122334667777777888888999999999999998877443 34455444443333333334666666555554443
No 346
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.78 E-value=2.7 Score=45.54 Aligned_cols=236 Identities=11% Similarity=0.050 Sum_probs=123.5
Q ss_pred EEEEEEcCCCc--EEEEcCCCcEEEEecCCce---EEEEeec--------ccccceEEEEEecC----CcEEEEecC--C
Q psy9770 452 VTCLAFTQGGE--VLSGDSNGNIIVWTRGSNT---ISKFIRN--------VHEGSVFSICVLKE----GSIISAGGK--D 512 (811)
Q Consensus 452 v~~l~~s~~g~--llsg~~dg~I~vwd~~~~~---~~~~~~~--------~h~~~V~~l~~s~d----g~~l~s~s~--d 512 (811)
...|+|.|+|. ++++...|.|++++..... .+..+.. ..+.....|+|.|+ +.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 68899999995 8888899999999754321 1111110 11467889999986 444443221 1
Q ss_pred ----------CcEEEEeCCCC---C-----ccceeeec--cccCCeEEEeeCCCCeEEEEeCC-----------------
Q psy9770 513 ----------GRLLQFDSNLQ---P-----TGYEAQIA--EHLGGIRTVSEGRGSQLIVGTTR----------------- 555 (811)
Q Consensus 513 ----------g~I~~wd~~~~---~-----~~~~~~~~--~~~~~v~~l~~~~~~~l~~~~~~----------------- 555 (811)
..|.-|.+... . ......+. ........|+|.|++.|+++..+
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~ 175 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDF 175 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcCCC
Confidence 14444655321 1 10111121 22234578899999999886543
Q ss_pred -CeEEEEEccCC---------------------ceeeeeecccceEEEEECCC-----CC-eEEEEECCC----eEEEEe
Q psy9770 556 -NCILVGSLNLG---------------------FSPVVLGHTDELWALAAHPS-----LS-QFLTAGFDR----IVQLWD 603 (811)
Q Consensus 556 -~~i~~~d~~~~---------------------~~~~~~~h~~~v~~l~~sp~-----~~-~l~s~s~dg----~v~iwd 603 (811)
+.|...+.+.. ......+|.+ ...++|+|. +. ++..+...| .-.|..
T Consensus 176 ~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN-p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~ 254 (463)
T 2wg3_C 176 TGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD-PGRCAVDRHPTDININLTILCSDSNGKNRSSARILQ 254 (463)
T ss_dssp TTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS-CCBEEEESSCSSTTCSEEEEEECC------CEEEEE
T ss_pred CeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC-cceEEECCCCCCcccceEEEecccCCCCCCCCeEee
Confidence 34666666542 0112234443 447899986 34 333322111 123333
Q ss_pred CCCC------cEEEEecCC--CCeEEEEEcC-------CCCEEEEEEeCCeEEEEecCCcc---eeEEe---------cC
Q psy9770 604 SMSH------SVVWSKDIA--EQAQSATFSP-------DGSIIIVGCIAGRWLVMDSETRE---AYSIH---------TD 656 (811)
Q Consensus 604 ~~~~------~~~~~~~~~--~~v~~~~~sp-------dg~~la~g~~dg~i~i~d~~~~~---~~~~~---------~~ 656 (811)
+..+ .++..+.+. ..+..+.|-. .|.+| ++...+.|....++... ....+ ..
T Consensus 255 i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f-~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 333 (463)
T 2wg3_C 255 IIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYV-FGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGY 333 (463)
T ss_dssp EC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEE-EEETTSCEEEEEC-----CCEEEEECEEETTSSCSC
T ss_pred eccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEE-EecCCCcEEEEEeCCCCceeeEEEeecCCccccccc
Confidence 3222 233333333 4667777743 23444 44455777766654332 11111 11
Q ss_pred CCCCeEEEEEccCCCEEEEEecC-----CcEEEEEecC
Q psy9770 657 GNEPIQVVKFSPDGKLLALGSRD-----NYIYVYEVSG 689 (811)
Q Consensus 657 ~~~~i~~i~~spdg~~lasgs~d-----g~I~iwd~~~ 689 (811)
....+..+.+.|||.++++.... ..=+||.+..
T Consensus 334 ~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~ 371 (463)
T 2wg3_C 334 FSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVD 371 (463)
T ss_dssp CCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEEC
T ss_pred ccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecC
Confidence 23568999999999887776521 2345677653
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.70 E-value=3.1 Score=45.30 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=81.0
Q ss_pred ecccceEEEEECCCCCeEEEEE-CCCeEEEEeCCCC------c-------EEEEecCCCCeEEEEEcCCCCEEEEEEeCC
Q psy9770 573 GHTDELWALAAHPSLSQFLTAG-FDRIVQLWDSMSH------S-------VVWSKDIAEQAQSATFSPDGSIIIVGCIAG 638 (811)
Q Consensus 573 ~h~~~v~~l~~sp~~~~l~s~s-~dg~v~iwd~~~~------~-------~~~~~~~~~~v~~~~~spdg~~la~g~~dg 638 (811)
.-.....++.++|||++++.++ .+.++.++|+..- + ........-.....+|.++|....+-..|.
T Consensus 320 P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 320 PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTT
T ss_pred eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecc
Confidence 3344556889999999888876 4788999998741 1 234455677889999999996666666899
Q ss_pred eEEEEecCCc----------ceeEEecCCCCCeEEEEE------ccCCCEEEEEe---cCCc----------EEEEEecC
Q psy9770 639 RWLVMDSETR----------EAYSIHTDGNEPIQVVKF------SPDGKLLALGS---RDNY----------IYVYEVSG 689 (811)
Q Consensus 639 ~i~i~d~~~~----------~~~~~~~~~~~~i~~i~~------spdg~~lasgs---~dg~----------I~iwd~~~ 689 (811)
+|.-|++... ..+..+.-|-. +-.+.- .+||++|++.. .|.. -.++|+..
T Consensus 400 qvvkWni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG 478 (638)
T 3sbq_A 400 QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG 478 (638)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS
T ss_pred eEEEEeccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC
Confidence 9999998754 34555554433 233333 57999999874 3443 37777765
Q ss_pred C
Q psy9770 690 D 690 (811)
Q Consensus 690 ~ 690 (811)
.
T Consensus 479 d 479 (638)
T 3sbq_A 479 D 479 (638)
T ss_dssp S
T ss_pred C
Confidence 4
No 348
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.83 E-value=3.9 Score=41.40 Aligned_cols=198 Identities=12% Similarity=0.078 Sum_probs=113.6
Q ss_pred CCCcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEecC--------------CCcEEEEeCCCCCccceeeecc
Q psy9770 468 SNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK--------------DGRLLQFDSNLQPTGYEAQIAE 533 (811)
Q Consensus 468 ~dg~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~--------------dg~I~~wd~~~~~~~~~~~~~~ 533 (811)
.++.|+..+.......+... .. +--++++|.+|+-... ...|+..+++.... ..+..
T Consensus 35 d~~~ly~~~~dg~~~~~l~~----~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~---~~l~~ 105 (302)
T 3s25_A 35 DNGRLYAMNIDGSNIHKLSN----DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS---TVLDP 105 (302)
T ss_dssp GTTEEEEEETTSCSCEEEEE----EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC---EEEEC
T ss_pred CCceEEEEcCCCCCCEEccC----Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc---eEeec
Confidence 35677777776544333322 11 2345677877765543 24677777766554 22221
Q ss_pred ccCCeEEEeeCCCCeEEEEe----CCCeEEEEEccCCceeeeeecccceEEEEECCCCCeEEEEEC-CCeEEEEeCCCCc
Q psy9770 534 HLGGIRTVSEGRGSQLIVGT----TRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGF-DRIVQLWDSMSHS 608 (811)
Q Consensus 534 ~~~~v~~l~~~~~~~l~~~~----~~~~i~~~d~~~~~~~~~~~h~~~v~~l~~sp~~~~l~s~s~-dg~v~iwd~~~~~ 608 (811)
.. ...++. .++.++... ....|+..+++......+..+.. .+++++++.|+-.+. ...|...++..+.
T Consensus 106 ~~--~~~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 106 DP--CIYASL-IGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQS 178 (302)
T ss_dssp SC--EEEEEE-ETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTE
T ss_pred CC--ccEEEE-eCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCC
Confidence 11 112322 334454443 35578888887765555555433 456778888876665 5788888887765
Q ss_pred EEEEecCCCCeEEEEEcCCCCEEEEEEeCC--eEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecC--CcEEE
Q psy9770 609 VVWSKDIAEQAQSATFSPDGSIIIVGCIAG--RWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRD--NYIYV 684 (811)
Q Consensus 609 ~~~~~~~~~~v~~~~~spdg~~la~g~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~d--g~I~i 684 (811)
...... +... ..+.|++.+|+.....+ .|..-++..... ..+.. ..+ ..|+|++.+|+.+... +.|..
T Consensus 179 ~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~ 250 (302)
T 3s25_A 179 EALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCV 250 (302)
T ss_dssp EEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECSC--SCE--EEEEEETTEEEEEECSSSCEEEE
T ss_pred EEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEeC--CCc--ceEEECCCEEEEEECCCCcEEEE
Confidence 443332 2222 34669999998876543 677777765543 33332 223 3488899998876433 34544
Q ss_pred EEecC
Q psy9770 685 YEVSG 689 (811)
Q Consensus 685 wd~~~ 689 (811)
-+++.
T Consensus 251 ~~~DG 255 (302)
T 3s25_A 251 VKNDG 255 (302)
T ss_dssp EETTS
T ss_pred EECCC
Confidence 44443
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.76 E-value=1.6 Score=50.20 Aligned_cols=181 Identities=12% Similarity=0.088 Sum_probs=97.9
Q ss_pred CeEEEEEccCCceeeee-e------c-ccceEEEEECC-CCCeEEEEECC------CeEEEEeCCCCcEEEEecC--CCC
Q psy9770 556 NCILVGSLNLGFSPVVL-G------H-TDELWALAAHP-SLSQFLTAGFD------RIVQLWDSMSHSVVWSKDI--AEQ 618 (811)
Q Consensus 556 ~~i~~~d~~~~~~~~~~-~------h-~~~v~~l~~sp-~~~~l~s~s~d------g~v~iwd~~~~~~~~~~~~--~~~ 618 (811)
+.+.+||..+.....+. . . ...-.+++..+ ++..++.||.+ ..+.+||..+.+-...... ...
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~ 491 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF 491 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc
Confidence 45777887766433332 1 1 11112333333 67777777754 3578899887654433221 222
Q ss_pred eEEEEEcCCCCEEEEEEeCC--eEEEEecCCcceeEEe-----cCCCCCeEEEEEccC-CCEEEEEec--C-----CcEE
Q psy9770 619 AQSATFSPDGSIIIVGCIAG--RWLVMDSETREAYSIH-----TDGNEPIQVVKFSPD-GKLLALGSR--D-----NYIY 683 (811)
Q Consensus 619 v~~~~~spdg~~la~g~~dg--~i~i~d~~~~~~~~~~-----~~~~~~i~~i~~spd-g~~lasgs~--d-----g~I~ 683 (811)
-.+++.-.++++++.|+.++ .+.+||+.+.+-...- .........+.+..+ +++++.|+. + +.+.
T Consensus 492 ~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~ 571 (695)
T 2zwa_A 492 RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAI 571 (695)
T ss_dssp SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEE
T ss_pred cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEE
Confidence 23344434888888887655 6899999876532221 112222334556555 677777765 2 3589
Q ss_pred EEEecCCCc----ceeEEEEec-CCCCCeeEEEeCCCCCeEEEecCC--------ceEEEEECCCCc
Q psy9770 684 VYEVSGDSR----KYSRVGRCT-GHSSFITHLDWSEDSMYIRSNSGD--------YELLYWNAGTCR 737 (811)
Q Consensus 684 iwd~~~~~~----~~~~~~~~~-~h~~~V~~l~~spdg~~L~s~s~D--------g~i~iWd~~~~~ 737 (811)
+||+.+..- .+..+.... ........+ ...++++++.|+.+ ..|.+||+.+.+
T Consensus 572 ~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 572 IFKYDAENATEPITVIKKLQHPLFQRYGSQIK-YITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp EEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-EEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred EEEccCCccccceEEEEcCCCCCCCcccceEE-EeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 999988641 134433321 111111222 22336777777742 458888887654
No 350
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.61 E-value=5.4 Score=42.04 Aligned_cols=266 Identities=12% Similarity=0.034 Sum_probs=125.3
Q ss_pred CCCcEEEEEecCC-CCCeEEEECCCc--EEEEEEcCCceeeeecccccccCC--------CCceEEEEEEcC---CCcEE
Q psy9770 399 SVDTVVAAEFHPL-DRNNIVTCGKSH--INFWTIDAGGTLYKKQGIFEMIRD--------KPKYVTCLAFTQ---GGEVL 464 (811)
Q Consensus 399 ~~~~V~~v~fsp~-~~~ll~~~~d~~--i~iwd~~~~~~~~~~~~~~~~l~~--------~~~~v~~l~~s~---~g~ll 464 (811)
....|.+|++.|. ...+++++..+. -.||...++............+.. ....|.++++.| .+.++
T Consensus 53 ~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 53 LGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 3457999999983 455666655541 234444444332222111000010 123588899986 34566
Q ss_pred EEcCCCcEEEEecCCceEEEEeec------------------ccccceEEEEEecC-CcEEEEecCCCcEEEEeCCCCCc
Q psy9770 465 SGDSNGNIIVWTRGSNTISKFIRN------------------VHEGSVFSICVLKE-GSIISAGGKDGRLLQFDSNLQPT 525 (811)
Q Consensus 465 sg~~dg~I~vwd~~~~~~~~~~~~------------------~h~~~V~~l~~s~d-g~~l~s~s~dg~I~~wd~~~~~~ 525 (811)
++...+.|...+-..... ..+.. .....|.+|.+.|. ...|+.+..++.|...+-.....
T Consensus 133 ~g~~~ggl~~S~DgG~tW-~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW 211 (394)
T 3b7f_A 133 AGTSPQGLFRSTDHGASW-EPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDW 211 (394)
T ss_dssp EEEETTEEEEESSTTSBC-EECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSC
T ss_pred EEecCCcEEEEcCCCCCe-EECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCCc
Confidence 776677666664332222 22210 11235788999873 33333354445455443322222
Q ss_pred cceee-eccc---------cCCeEEEeeCCC--CeEEEEeCCCeEEEEEccCCceeeeee-c-c---cceEEEEECCC-C
Q psy9770 526 GYEAQ-IAEH---------LGGIRTVSEGRG--SQLIVGTTRNCILVGSLNLGFSPVVLG-H-T---DELWALAAHPS-L 587 (811)
Q Consensus 526 ~~~~~-~~~~---------~~~v~~l~~~~~--~~l~~~~~~~~i~~~d~~~~~~~~~~~-h-~---~~v~~l~~sp~-~ 587 (811)
..... .... ...+..+.+.+. +.+++++..+ |+..+-....-..+.. . . ..+..++++|. .
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~ 290 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDP 290 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCT
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCCCCcceECCCCCCCCCccceEEEEECCCCC
Confidence 00000 0000 124778887775 7777776544 5544432221111111 1 1 23567888763 3
Q ss_pred CeEEEEEC-----------CCeEEEEeCCCC-cEEEEe--cCCC-------CeEEEEEcCC-CCEEEEEEeCCeEEEEec
Q psy9770 588 SQFLTAGF-----------DRIVQLWDSMSH-SVVWSK--DIAE-------QAQSATFSPD-GSIIIVGCIAGRWLVMDS 645 (811)
Q Consensus 588 ~~l~s~s~-----------dg~v~iwd~~~~-~~~~~~--~~~~-------~v~~~~~spd-g~~la~g~~dg~i~i~d~ 645 (811)
..|..+.. ++...+|....+ +.-..+ .... ....++++|. ...|++++.++.|..- .
T Consensus 291 ~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S-~ 369 (394)
T 3b7f_A 291 RTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS-A 369 (394)
T ss_dssp TCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE-S
T ss_pred CEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE-C
Confidence 34444432 233455554432 221111 1111 0135788874 3456666655655433 2
Q ss_pred CCcceeEEecCCCCCeEEEEEc
Q psy9770 646 ETREAYSIHTDGNEPIQVVKFS 667 (811)
Q Consensus 646 ~~~~~~~~~~~~~~~i~~i~~s 667 (811)
..++....+..+-..+.+++|.
T Consensus 370 D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 370 DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp STTSBCEEEECSCSCEEEEEEE
T ss_pred CCCCCceEcccCCCCeeEEEEe
Confidence 3344444444444456676663
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.57 E-value=2.8 Score=42.00 Aligned_cols=186 Identities=9% Similarity=0.035 Sum_probs=102.2
Q ss_pred CCeEEEeeCCCCeEEEEeCCCeEEEEEccCC-ceeeeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCCC-cEEEEe
Q psy9770 536 GGIRTVSEGRGSQLIVGTTRNCILVGSLNLG-FSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH-SVVWSK 613 (811)
Q Consensus 536 ~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~-~~~~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~-~~~~~~ 613 (811)
..|..++......++. + ++.++.|-.... ..-.-......|..++..... .++. . ||.|..|-.... ++-...
T Consensus 24 ~~i~~ia~G~~h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 24 SGVDAIAGGYFHGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp SSCCEEEECSSEEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred CCCcEEEeCCCeEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence 3577777766655555 5 899999976543 111111123366777765433 2333 4 899999976542 221112
Q ss_pred cCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcc
Q psy9770 614 DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRK 693 (811)
Q Consensus 614 ~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~ 693 (811)
.....|..++...+ ..++-+ +|.|+.|-....-++.........|..++...+ +.+.-. ||.|+.|-.....+.
T Consensus 99 ~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gql 172 (282)
T 3qhy_B 99 EARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQT 172 (282)
T ss_dssp GGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTT
T ss_pred ccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCC
Confidence 23456777776544 333345 899999975542222111122345766665433 233334 799999977654322
Q ss_pred eeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCccc
Q psy9770 694 YSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQI 739 (811)
Q Consensus 694 ~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~ 739 (811)
... ..-...|..++...+- .++. .||.|+.|-....-++
T Consensus 173 g~p----~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gql 211 (282)
T 3qhy_B 173 TVP----AEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQT 211 (282)
T ss_dssp SCC----GGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTT
T ss_pred CCc----eecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCC
Confidence 111 1113457777765432 3333 5999999987654444
No 352
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.36 E-value=1.7 Score=50.12 Aligned_cols=197 Identities=12% Similarity=0.086 Sum_probs=99.6
Q ss_pred CCCeEEEECC-----CcEEEEEEcCCceeeeec-ccc-cccCCCCceEEEEEEcC-CCc-EEEEcCC------CcEEEEe
Q psy9770 412 DRNNIVTCGK-----SHINFWTIDAGGTLYKKQ-GIF-EMIRDKPKYVTCLAFTQ-GGE-VLSGDSN------GNIIVWT 476 (811)
Q Consensus 412 ~~~ll~~~~d-----~~i~iwd~~~~~~~~~~~-~~~-~~l~~~~~~v~~l~~s~-~g~-llsg~~d------g~I~vwd 476 (811)
++.+++.+|. +.+.+||..++.- .... ... ..+. .+..-.+++..+ ++. ++.|+.+ ..+.+||
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W-~~~~~~~p~~~~p-~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKI-DMKNIEVSSSEVP-VARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCE-EEEECCCCCSCCC-CCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeE-EEeccCCCCCCCC-ccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 4556666552 4588888875432 2221 100 0001 111112333333 666 4466644 3588999
Q ss_pred cCCceEEEEeecccccceEEEEEecCCcEEEEecCCC--cEEEEeCCCCCccceee---eccccCCeEEEeeCCC-CeEE
Q psy9770 477 RGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDG--RLLQFDSNLQPTGYEAQ---IAEHLGGIRTVSEGRG-SQLI 550 (811)
Q Consensus 477 ~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg--~I~~wd~~~~~~~~~~~---~~~~~~~v~~l~~~~~-~~l~ 550 (811)
..+.+....-.......-.+++...++.+++.|+.++ .+.+||..+........ .+........+.+..+ +.++
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 9887655442211111112333334788888888665 68999998766522221 2212222222333333 4444
Q ss_pred E-EeC-------CCeEEEEEccCCc------eeeeeec--cc-ceEEEEECCCCCeEEEEEC--------CCeEEEEeCC
Q psy9770 551 V-GTT-------RNCILVGSLNLGF------SPVVLGH--TD-ELWALAAHPSLSQFLTAGF--------DRIVQLWDSM 605 (811)
Q Consensus 551 ~-~~~-------~~~i~~~d~~~~~------~~~~~~h--~~-~v~~l~~sp~~~~l~s~s~--------dg~v~iwd~~ 605 (811)
+ |+. .+.+.+||+.+.. ...+... .. .-.+++...++..++.|+. ...|.+||..
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 4 443 2468899988765 2222221 11 1112233333677777774 3468999998
Q ss_pred CCcEE
Q psy9770 606 SHSVV 610 (811)
Q Consensus 606 ~~~~~ 610 (811)
+.+..
T Consensus 635 t~~W~ 639 (695)
T 2zwa_A 635 SETLT 639 (695)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 87654
No 353
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.23 E-value=2.7 Score=42.17 Aligned_cols=224 Identities=13% Similarity=0.052 Sum_probs=121.5
Q ss_pred ccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCC-cee
Q psy9770 491 EGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLG-FSP 569 (811)
Q Consensus 491 ~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~-~~~ 569 (811)
...|..++..... .++ -. ||.|+.|-.+..-..- .. ......|..++......++. . ++.++.|-.... ..-
T Consensus 23 ~~~i~~ia~G~~h-~~~-l~-~G~v~~wG~n~~Gqlg-~p-~~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 23 QSGVDAIAGGYFH-GLA-LK-GGKVLGWGANLNGQLT-MP-AATQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SSSCCEEEECSSE-EEE-EE-TTEEEEEECCSSSTTS-CC-GGGGSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTC
T ss_pred cCCCcEEEeCCCe-EEE-EE-CCEEEEEeCCCCCCCC-CC-ccCCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCC
Confidence 3457777765443 333 24 8999999875432201 11 11234677787777766666 5 899999976542 111
Q ss_pred eeeecccceEEEEECCCCCeEEEEECCCeEEEEeCCC-CcEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCc
Q psy9770 570 VVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMS-HSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETR 648 (811)
Q Consensus 570 ~~~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~-~~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~ 648 (811)
.-..-...|..++...+ ..+... ||.|..|-... +++-........|..++...+. .++-. +|.++.|-....
T Consensus 96 ~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYF 169 (282)
T ss_dssp CCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTT
T ss_pred CCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCC
Confidence 11111246777777643 333344 89999997654 2221112233457766654432 22223 799999875542
Q ss_pred ceeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceE
Q psy9770 649 EAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYEL 728 (811)
Q Consensus 649 ~~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i 728 (811)
.++.........|..|+...+. .++. .||.|+.|-.....+..... .....|..++...+. .++.. ||.|
T Consensus 170 gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~----~~~~~v~~i~~G~~h-~~al~--~g~v 239 (282)
T 3qhy_B 170 GQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPT----EALSGVSAIASGEWY-SLALK--NGKV 239 (282)
T ss_dssp STTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCG----GGGSSCCEEEECSSC-EEEEE--TTEE
T ss_pred CCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCc----ccCCCceEEEcCCCE-EEEEE--CCEE
Confidence 2221111113457777664332 2333 58999999766543221111 112357777765443 33333 9999
Q ss_pred EEEECCCCc
Q psy9770 729 LYWNAGTCR 737 (811)
Q Consensus 729 ~iWd~~~~~ 737 (811)
+.|-.....
T Consensus 240 ~~wG~n~~g 248 (282)
T 3qhy_B 240 IAWGSSRTA 248 (282)
T ss_dssp EEESTTCCC
T ss_pred EEecCCCCc
Confidence 999766543
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=93.89 E-value=7.1 Score=40.70 Aligned_cols=207 Identities=12% Similarity=0.088 Sum_probs=108.5
Q ss_pred CCeEEEEEcCCCcEEEE--eeccCC-C-CC---CCCCeEEEEeCCCC--cEEEEeccCCc----cccEEEEEEe-cC---
Q psy9770 300 DDIKCLSIHPNKLLIAT--GQVAGH-D-AR---EGKPHIRIWNSVSL--FTVSIIGIGEF----ERSISCLSFS-KA--- 362 (811)
Q Consensus 300 ~~V~~la~spdg~~Las--g~~dg~-~-~~---~~~~~I~iWd~~t~--~~~~~l~~~~h----~~~V~~l~fs-~~--- 362 (811)
-.|..+...+++++-+. |..+.. . .. ...|.|.+||+.+. +.++++.+... ...+..+.+. ..
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 35667777776665443 211100 0 11 35679999999999 99999875322 4568888888 21
Q ss_pred CCCcEEEEEeCCCCceEEEEEcccCCCcceEE---------Eee--eC----CCcEEEEEecCC----CCCeEEEECCCc
Q psy9770 363 DGGTFLCAVDEGNDYNISVWDWQKSDRGHKIT---------ETK--CS----VDTVVAAEFHPL----DRNNIVTCGKSH 423 (811)
Q Consensus 363 ~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~---------~~~--~~----~~~V~~v~fsp~----~~~ll~~~~d~~ 423 (811)
+.+.-.|.++....+-|.|+|+.+++....+. .+. +. ...|..++++|+ +..+....-. .
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls-s 245 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS-A 245 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS-C
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC-C
Confidence 12233444545678899999999887211110 000 00 236788888886 3344443333 3
Q ss_pred EEEEEEcCC----ceeeeecccccccCCCCceEEEEEEc-CCCcEE-EEcCCCcEEEEecCC-----ceEEEEeeccccc
Q psy9770 424 INFWTIDAG----GTLYKKQGIFEMIRDKPKYVTCLAFT-QGGEVL-SGDSNGNIIVWTRGS-----NTISKFIRNVHEG 492 (811)
Q Consensus 424 i~iwd~~~~----~~~~~~~~~~~~l~~~~~~v~~l~~s-~~g~ll-sg~~dg~I~vwd~~~-----~~~~~~~~~~h~~ 492 (811)
-++|.+.+. ..+......+.. ++....-..+++. .+|.++ +--....|..|+..+ ...........-.
T Consensus 246 ~~ly~V~T~~L~~~~~~~~v~~~G~-kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~ 324 (381)
T 3q6k_A 246 IKVYSVNTKELKQKGGKLNPELLGN-RGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFV 324 (381)
T ss_dssp SEEEEEEHHHHSSTTCCCCCEEEEE-CCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCC
T ss_pred CcEEEEEHHHhhCcchhhceEEeee-cCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCcc
Confidence 344444321 011000001111 1111334456675 677754 667778899999875 1222222211222
Q ss_pred ceEEEEEecCCcEEEE
Q psy9770 493 SVFSICVLKEGSIISA 508 (811)
Q Consensus 493 ~V~~l~~s~dg~~l~s 508 (811)
.+..+.+..+|.+.+.
T Consensus 325 ~pd~~~i~~~g~Lwv~ 340 (381)
T 3q6k_A 325 FGTDISVDSKGGLWFM 340 (381)
T ss_dssp SEEEEEECTTSCEEEE
T ss_pred ccCeEEECCCCeEEEE
Confidence 3556666555554443
No 355
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=92.46 E-value=0.091 Score=39.28 Aligned_cols=26 Identities=19% Similarity=0.262 Sum_probs=23.0
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
-++||.+||+++++.++||+.||+-|
T Consensus 38 kd~~I~eLEk~L~ekd~eI~~LqseL 63 (72)
T 3nmd_A 38 RDALIDELELELDQKDELIQMLQNEL 63 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999999999999999876
No 356
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=90.54 E-value=16 Score=37.09 Aligned_cols=235 Identities=10% Similarity=0.023 Sum_probs=128.8
Q ss_pred cCCcEEEEecCCCcEEEEeCCCCCc--cceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCC--------ce--
Q psy9770 501 KEGSIISAGGKDGRLLQFDSNLQPT--GYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLG--------FS-- 568 (811)
Q Consensus 501 ~dg~~l~s~s~dg~I~~wd~~~~~~--~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~--------~~-- 568 (811)
++..++++.+.+|.|+--.+..... .....+.+...-+..+.......++..+..|.++.+....- -.
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i 82 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI 82 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence 4566777888899888765431110 01122333333344444566788999999998887764321 00
Q ss_pred -eeee-ecccceEEEE-ECC--CCCeEEEEECCCeEEEEeCCCC------cEEEE--ecCCCCeEEEEEcCCCCEEEEEE
Q psy9770 569 -PVVL-GHTDELWALA-AHP--SLSQFLTAGFDRIVQLWDSMSH------SVVWS--KDIAEQAQSATFSPDGSIIIVGC 635 (811)
Q Consensus 569 -~~~~-~h~~~v~~l~-~sp--~~~~l~s~s~dg~v~iwd~~~~------~~~~~--~~~~~~v~~~~~spdg~~la~g~ 635 (811)
..+. .....|.++. +.. +..+++.++.+|.++...+..- .-+.. +.....+..+........|+..+
T Consensus 83 ~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~T 162 (323)
T 1wp5_A 83 ANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVT 162 (323)
T ss_dssp GGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEE
T ss_pred hhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEEe
Confidence 1111 1223455543 332 2568999999999999876421 11211 22335666666655666788889
Q ss_pred eCCeEEEEecCCcce-------eEEec-CCCCCeEEEEEccCCC-EEEEEecCCcEEEEEecCC---C---cceeEEEEe
Q psy9770 636 IAGRWLVMDSETREA-------YSIHT-DGNEPIQVVKFSPDGK-LLALGSRDNYIYVYEVSGD---S---RKYSRVGRC 700 (811)
Q Consensus 636 ~dg~i~i~d~~~~~~-------~~~~~-~~~~~i~~i~~spdg~-~lasgs~dg~I~iwd~~~~---~---~~~~~~~~~ 700 (811)
.+|.+..++...-.. +..+. .....|..+..-+++. .|++.+..|..+..++..- . +-...+..+
T Consensus 163 ~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~ 242 (323)
T 1wp5_A 163 HNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILREL 242 (323)
T ss_dssp TTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCC
T ss_pred CCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeec
Confidence 999998888753211 11111 1234566665444455 7888888999888877651 1 111111112
Q ss_pred cCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCC
Q psy9770 701 TGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 701 ~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
......+..+....++..++..+..|.+.-..+..
T Consensus 243 ~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 243 KANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp SSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred CCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 12222444332223334555566777776666654
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.30 E-value=22 Score=38.22 Aligned_cols=229 Identities=12% Similarity=0.032 Sum_probs=115.6
Q ss_pred cceEEEEEecCCc--EEEEecCCCcEEEEeCCCCCc-cceeeec---------cccCCeEEEeeCCC----CeEEEEeCC
Q psy9770 492 GSVFSICVLKEGS--IISAGGKDGRLLQFDSNLQPT-GYEAQIA---------EHLGGIRTVSEGRG----SQLIVGTTR 555 (811)
Q Consensus 492 ~~V~~l~~s~dg~--~l~s~s~dg~I~~wd~~~~~~-~~~~~~~---------~~~~~v~~l~~~~~----~~l~~~~~~ 555 (811)
.....|+|.|||. +|+ +...|.|++++.+.... .....+. ........+++.|+ +.+++....
T Consensus 14 ~~P~~~a~~pdG~~rl~V-~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFI-LEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEE-EETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEE-EeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 3467899999996 555 67889999997643211 0111111 11456778998886 666664321
Q ss_pred -------------CeEEEEEccCC---------ceeeee----ecccceEEEEECCCCCeEEEEECCC------------
Q psy9770 556 -------------NCILVGSLNLG---------FSPVVL----GHTDELWALAAHPSLSQFLTAGFDR------------ 597 (811)
Q Consensus 556 -------------~~i~~~d~~~~---------~~~~~~----~h~~~v~~l~~sp~~~~l~s~s~dg------------ 597 (811)
..|..|.+... ...++. ........|+|.|||.++++.+..+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~ 172 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGL 172 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCc
Confidence 24555665421 111111 1122457899999999888776533
Q ss_pred -----eEEEEeCCCC---------------------cEEEEecCCCCeEEEEEcCC-----CC-EEEEEEeCCe----EE
Q psy9770 598 -----IVQLWDSMSH---------------------SVVWSKDIAEQAQSATFSPD-----GS-IIIVGCIAGR----WL 641 (811)
Q Consensus 598 -----~v~iwd~~~~---------------------~~~~~~~~~~~v~~~~~spd-----g~-~la~g~~dg~----i~ 641 (811)
.|.-.|.... ..++...+. ....++|.|. |. ++.++...|. -.
T Consensus 173 ~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~R-Np~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~e 251 (463)
T 2wg3_C 173 SDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLH-DPGRCAVDRHPTDININLTILCSDSNGKNRSSAR 251 (463)
T ss_dssp CSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCS-SCCBEEEESSCSSTTCSEEEEEECC------CEE
T ss_pred CCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCC-CcceEEECCCCCCcccceEEEecccCCCCCCCCe
Confidence 2333333321 112222222 2456889986 34 3444332121 22
Q ss_pred EEecCCcc------eeEEecCCC-CCeEEEEEccC-------CCEEEEEecCCcEEEEEecCCCcceeEEEEe-------
Q psy9770 642 VMDSETRE------AYSIHTDGN-EPIQVVKFSPD-------GKLLALGSRDNYIYVYEVSGDSRKYSRVGRC------- 700 (811)
Q Consensus 642 i~d~~~~~------~~~~~~~~~-~~i~~i~~spd-------g~~lasgs~dg~I~iwd~~~~~~~~~~~~~~------- 700 (811)
|..+..+. .+..+..+. ..++.+.|-.. |.+|+ +...+.|....++.....++....+
T Consensus 252 i~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~-~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~ 330 (463)
T 2wg3_C 252 ILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVF-GDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSC 330 (463)
T ss_dssp EEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEE-EETTSCEEEEEC-----CCEEEEECEEETTSS
T ss_pred EeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEE-ecCCCcEEEEEeCCCCceeeEEEeecCCcccc
Confidence 33332222 333333221 46777777432 33444 4555766655555443222211111
Q ss_pred -cCCCCCeeEEEeCCCCCeEEEec
Q psy9770 701 -TGHSSFITHLDWSEDSMYIRSNS 723 (811)
Q Consensus 701 -~~h~~~V~~l~~spdg~~L~s~s 723 (811)
......+..+.+.|||.++++..
T Consensus 331 ~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 331 RGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp CSCCCSEEEEEEECTTCCEEEEEE
T ss_pred cccccCcceEEEECCCCCEEEEec
Confidence 11235789999999998877764
No 358
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=90.12 E-value=32 Score=39.79 Aligned_cols=160 Identities=8% Similarity=0.009 Sum_probs=76.1
Q ss_pred CCCCeEEEEEcCCC-cEEEEeeccCCCCCCCCCeEEEEeCC-CCcEEEEeccCC----------ccccEEEEEEecCCCC
Q psy9770 298 HTDDIKCLSIHPNK-LLIATGQVAGHDAREGKPHIRIWNSV-SLFTVSIIGIGE----------FERSISCLSFSKADGG 365 (811)
Q Consensus 298 h~~~V~~la~spdg-~~Lasg~~dg~~~~~~~~~I~iWd~~-t~~~~~~l~~~~----------h~~~V~~l~fs~~~dg 365 (811)
-...|.+|+++|.. ..+..+...| . ||... .|+.-..+.... ....|.++++.|.+.+
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~g--------g--v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~ 88 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIG--------G--TYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPD 88 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSS--------C--EEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTT
T ss_pred CCCceeEEEeCCCCCCEEEEEeccC--------c--EEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCC
Confidence 45689999999965 3444444333 2 44332 344444433111 2346999999985556
Q ss_pred cEEEEEeCCC---CceEEEEEcc-cCCCcceEEEeeeC-----CCc--EEEEEecCCCCCeEEEECCCcEEEEEEcCCce
Q psy9770 366 TFLCAVDEGN---DYNISVWDWQ-KSDRGHKITETKCS-----VDT--VVAAEFHPLDRNNIVTCGKSHINFWTIDAGGT 434 (811)
Q Consensus 366 ~~Lasv~~s~---d~~i~vWd~~-~~~~~~~~~~~~~~-----~~~--V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~ 434 (811)
.++++. +.. .....||.-. .++....+. .... .+. ...++++|.+...+....... .+|.-.++..
T Consensus 89 ~~~~~~-g~~~~~~~~~~i~~S~DgG~TW~~~~-~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~-~l~~S~DgG~ 165 (763)
T 3a0f_A 89 RLYLAQ-GDYVQWDPWAAFLVSDDRGKTFKQYR-SPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQ-GLWRSTDRAQ 165 (763)
T ss_dssp CEEEEE-CSCTTTCSCCEEEEESSTTSSCEEEE-CSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSS-CEEEESSTTS
T ss_pred EEEEEe-cccccCCCCceEEEECCCCCCceecc-CCcccCccccCccccceEEECCCCCCEEEEEeCCC-cEEEECCCCc
Confidence 666653 210 1123444433 333221222 1100 111 146888887654444444321 3444444443
Q ss_pred eeeecccccccCCCCceEEEEEEcCCC--cEEEEcCCC
Q psy9770 435 LYKKQGIFEMIRDKPKYVTCLAFTQGG--EVLSGDSNG 470 (811)
Q Consensus 435 ~~~~~~~~~~l~~~~~~v~~l~~s~~g--~llsg~~dg 470 (811)
-.+....+.........+..+++.|.. .++++..++
T Consensus 166 TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 166 TWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp SCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CccccccCcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 333322111101112347788898764 366665554
No 359
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=90.09 E-value=0.22 Score=36.78 Aligned_cols=25 Identities=40% Similarity=0.635 Sum_probs=22.6
Q ss_pred hhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 27 RERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 27 ~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
..|+.+||+.++.+.+||..||+-|
T Consensus 24 de~I~eLE~~L~~kd~eI~eLr~~L 48 (67)
T 1zxa_A 24 EERIKELEKRLSEKEEEIQELKRKL 48 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999654
No 360
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=88.74 E-value=22 Score=35.90 Aligned_cols=233 Identities=9% Similarity=-0.009 Sum_probs=127.3
Q ss_pred CCcEEEEecCCCcEEEEeCCCCCcc-------ceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccC---C-----
Q psy9770 502 EGSIISAGGKDGRLLQFDSNLQPTG-------YEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNL---G----- 566 (811)
Q Consensus 502 dg~~l~s~s~dg~I~~wd~~~~~~~-------~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~---~----- 566 (811)
+..++++.+.+|.|+--.+...... ....+.+...-+..+.......+++.+..|.++.+.... .
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~ 81 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR 81 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence 4556777888888887766432210 011122333333444456677888999999888776432 1
Q ss_pred ce---eee-eecccceEEEEEC---CCCCeEEEEECCCeEEEEeCCCCc-----EEEE--ecCCCCeEEEEEcCCCCEEE
Q psy9770 567 FS---PVV-LGHTDELWALAAH---PSLSQFLTAGFDRIVQLWDSMSHS-----VVWS--KDIAEQAQSATFSPDGSIII 632 (811)
Q Consensus 567 ~~---~~~-~~h~~~v~~l~~s---p~~~~l~s~s~dg~v~iwd~~~~~-----~~~~--~~~~~~v~~~~~spdg~~la 632 (811)
-. ..+ ......|.++... .+..+++..+.+|.++-..+..-. -+.. +.....+..+....+...|+
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i~ 161 (307)
T 1zi0_A 82 GRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVM 161 (307)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEE
T ss_pred CeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEEE
Confidence 00 011 1233456555432 345689999999999998764211 1111 22235666665555666788
Q ss_pred EEEeCCeEEEEecCCcce-------eE--EecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCC---c--ceeEEE
Q psy9770 633 VGCIAGRWLVMDSETREA-------YS--IHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDS---R--KYSRVG 698 (811)
Q Consensus 633 ~g~~dg~i~i~d~~~~~~-------~~--~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~---~--~~~~~~ 698 (811)
..+.+|.+..++...-.. +. .+. ....|..+....++..|++.+..|.++-.++..-. + ......
T Consensus 162 l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~ 240 (307)
T 1zi0_A 162 LFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISI 240 (307)
T ss_dssp EEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESS
T ss_pred EECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEee
Confidence 889999988887653211 11 122 23456666555556678888899998888774311 1 111111
Q ss_pred EecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCC
Q psy9770 699 RCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 699 ~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
.+..-.+.+..+....+...|+..+.+|.+.-+.+..
T Consensus 241 ~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 241 KVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp CCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred EecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 2222234454444433344455566677776666654
No 361
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=88.59 E-value=25 Score=36.52 Aligned_cols=136 Identities=11% Similarity=0.193 Sum_probs=86.7
Q ss_pred eEEEEeCCCC--cEEEEecCC-------CCeEEEEEc---CC----CCEEEEEE-eCCeEEEEecCCcceeEEec----C
Q psy9770 598 IVQLWDSMSH--SVVWSKDIA-------EQAQSATFS---PD----GSIIIVGC-IAGRWLVMDSETREAYSIHT----D 656 (811)
Q Consensus 598 ~v~iwd~~~~--~~~~~~~~~-------~~v~~~~~s---pd----g~~la~g~-~dg~i~i~d~~~~~~~~~~~----~ 656 (811)
.|.+||+.+. +.+..+.++ +.+..+.+. |+ +.++.+.. ..+.|.|||+.+++..+.+. .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6778888888 877775543 346777777 32 34444444 35689999999887665542 1
Q ss_pred C--------------CCCeEEEEEccC----CCEEEEEecCCcEEEEEecCC-------CcceeEEEEecCCCCCeeEEE
Q psy9770 657 G--------------NEPIQVVKFSPD----GKLLALGSRDNYIYVYEVSGD-------SRKYSRVGRCTGHSSFITHLD 711 (811)
Q Consensus 657 ~--------------~~~i~~i~~spd----g~~lasgs~dg~I~iwd~~~~-------~~~~~~~~~~~~h~~~V~~l~ 711 (811)
. ...|..|+++|+ ++.|....-.+ -++|.+.+. ...++.++. ++....-..++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~-kg~~s~~~~~~ 281 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGN-RGKYNDAIALA 281 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEE-CCTTCCEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeee-cCCCCCcceEE
Confidence 0 236788999998 78888776554 455665431 122233322 22223334567
Q ss_pred eC-CCCCeEEEecCCceEEEEECCC
Q psy9770 712 WS-EDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 712 ~s-pdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
+. .+|.++++--....|..|+..+
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCC
Confidence 75 6787788888888999999875
No 362
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=86.54 E-value=0.9 Score=28.24 Aligned_cols=28 Identities=25% Similarity=0.388 Sum_probs=25.2
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTLAD 53 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~a~ 53 (811)
|.|+|.+|..+....|+|..-||+-|+.
T Consensus 6 LE~kVEeLl~~~~~Le~EV~RL~~ll~~ 33 (36)
T 1kd8_A 6 LEAEVEEIESEVWHLENEVARLEKENAE 33 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcc
Confidence 7899999999999999999999988775
No 363
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=85.76 E-value=33 Score=34.88 Aligned_cols=231 Identities=7% Similarity=0.002 Sum_probs=130.7
Q ss_pred cEEEEecCCCcEEEEeCCCCCc-------cceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccC---C-----ce
Q psy9770 504 SIISAGGKDGRLLQFDSNLQPT-------GYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNL---G-----FS 568 (811)
Q Consensus 504 ~~l~s~s~dg~I~~wd~~~~~~-------~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~---~-----~~ 568 (811)
..+++.+.+|.|+--.+..... .....+.+...-...+.......+++.+..|.++...... . -.
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 4566677778777655321100 0112222222223334456667788888888887765321 1 00
Q ss_pred e---ee-eecccceEEEEECC---CCCeEEEEECCCeEEEEeCCCCcE-----E--EEecCCCCeEEEEEcCCCCEEEEE
Q psy9770 569 P---VV-LGHTDELWALAAHP---SLSQFLTAGFDRIVQLWDSMSHSV-----V--WSKDIAEQAQSATFSPDGSIIIVG 634 (811)
Q Consensus 569 ~---~~-~~h~~~v~~l~~sp---~~~~l~s~s~dg~v~iwd~~~~~~-----~--~~~~~~~~v~~~~~spdg~~la~g 634 (811)
. .+ ......|.++..-+ +..++++.+.+|.|+...+..... + ..+.-...+..+........|+..
T Consensus 84 ~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~ 163 (327)
T 3uc1_A 84 HVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLV 163 (327)
T ss_dssp EHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEE
T ss_pred EHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEE
Confidence 0 01 11234555554333 577999999999999987654221 1 112334566666666666788889
Q ss_pred EeCCeEEEEecC--Ccc---------eeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCC---c--ceeEEE
Q psy9770 635 CIAGRWLVMDSE--TRE---------AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDS---R--KYSRVG 698 (811)
Q Consensus 635 ~~dg~i~i~d~~--~~~---------~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~---~--~~~~~~ 698 (811)
+..|.+..+... .-. ....+. ....|..+...+++.+|+..+..|.++.-.+..-. + ......
T Consensus 164 T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~ 242 (327)
T 3uc1_A 164 SANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTV 242 (327)
T ss_dssp ETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESS
T ss_pred ECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEE
Confidence 999999888776 211 111122 34557777666667788999999999988765421 1 111111
Q ss_pred EecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCC
Q psy9770 699 RCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 699 ~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
.+..-.+.+..+....+...++..+.+|.+.-+++..
T Consensus 243 ~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 243 MYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 2222133454544444455666677788888887754
No 364
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=85.40 E-value=33 Score=34.59 Aligned_cols=188 Identities=12% Similarity=0.064 Sum_probs=112.2
Q ss_pred cCCcEEEEecCCCcEEEEeCCCCCcc-------ceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCcee----
Q psy9770 501 KEGSIISAGGKDGRLLQFDSNLQPTG-------YEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSP---- 569 (811)
Q Consensus 501 ~dg~~l~s~s~dg~I~~wd~~~~~~~-------~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~~~---- 569 (811)
++..++++.+.+|.|+--.+..-... ....+.+...-+..+.......+++.+..|.++......-...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 45667788899999988766432110 0112233333333444556678888999998887765421000
Q ss_pred -------ee-eecccceEEEEECC---CCCeEEEEECCCeEEEEeCCCC-------cEEEEecCCCCeEEEEEcCCCCEE
Q psy9770 570 -------VV-LGHTDELWALAAHP---SLSQFLTAGFDRIVQLWDSMSH-------SVVWSKDIAEQAQSATFSPDGSII 631 (811)
Q Consensus 570 -------~~-~~h~~~v~~l~~sp---~~~~l~s~s~dg~v~iwd~~~~-------~~~~~~~~~~~v~~~~~spdg~~l 631 (811)
.+ ......|.++...+ +..+|+..+..|.++...+..- .....+.....+..+....++..+
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i 165 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKV 165 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEE
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEE
Confidence 11 11223455544332 4568889999999998876432 111122334566666666556788
Q ss_pred EEEEeCCeEEEEecCCcc---------eeEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecC
Q psy9770 632 IVGCIAGRWLVMDSETRE---------AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSG 689 (811)
Q Consensus 632 a~g~~dg~i~i~d~~~~~---------~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~ 689 (811)
+..+.+|.+..+....-. ....+. ....|..+..-.++..|++.+..|..+...+..
T Consensus 166 ~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 166 ICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 889999999999875421 111222 234566665555667788888999999988854
No 365
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=83.88 E-value=67 Score=36.87 Aligned_cols=102 Identities=10% Similarity=0.066 Sum_probs=51.1
Q ss_pred eEEEEECCCCC-eEEEEECCCeEEEE-eCC----CCcEEEEe---cC-CCCeEEEEEcCCCCEEEEEEeCC-eEEEEecC
Q psy9770 578 LWALAAHPSLS-QFLTAGFDRIVQLW-DSM----SHSVVWSK---DI-AEQAQSATFSPDGSIIIVGCIAG-RWLVMDSE 646 (811)
Q Consensus 578 v~~l~~sp~~~-~l~s~s~dg~v~iw-d~~----~~~~~~~~---~~-~~~v~~~~~spdg~~la~g~~dg-~i~i~d~~ 646 (811)
+..|+++|... .++.+ .++.|..- |.. .+...+.. .. ...+..+...|.+..|+.+..|. .++-.|+.
T Consensus 385 ~~~l~idp~~~~~~~~g-~~~g~~~s~d~g~w~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~l~~~~~d~g~~~~~d~~ 463 (737)
T 2cn3_A 385 IGDIEIDPFNSDRMMYV-TGATIYGCDNLTDWDRGGKVKIEVKATGIEECAVLDLVSPPEGAPLVSAVGDLVGFVHDDLK 463 (737)
T ss_dssp CCCEEECTTCTTCEEEE-CSSCEEEESCGGGGGGTCCEEEEECCTTCBCCBEEEEECCSSSCSEEEEETTTBCCEESSTT
T ss_pred cccEEECCCCCCcEEEe-CCCeEEeecCCCccccCCceeEEEcCCCceeeeeeeEEcCCCCCeeEEEEeccCCeEEcccc
Confidence 55788888654 55555 35555432 111 11112221 11 23455666678777777776554 33333443
Q ss_pred CcceeEEecCCCCCeEEEEEccC--CCEEEEEecCCc
Q psy9770 647 TREAYSIHTDGNEPIQVVKFSPD--GKLLALGSRDNY 681 (811)
Q Consensus 647 ~~~~~~~~~~~~~~i~~i~~spd--g~~lasgs~dg~ 681 (811)
..... .+.........|+|..+ ..++++|..|+.
T Consensus 464 ~~~~~-~~~~~~~~~~~i~~ag~~~~~~v~vG~~dg~ 499 (737)
T 2cn3_A 464 VGPKK-MHVPSYSSGTGIDYAELVPNFMALVAKADLY 499 (737)
T ss_dssp SCCSS-CSCTTCSEEEEEEEETTEEEEEEEEEECSSC
T ss_pred cCCcc-ccCCccccccceeecccCCCeEEEEECcCCC
Confidence 32111 11223334677888655 346677776664
No 366
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=83.29 E-value=1.6 Score=33.78 Aligned_cols=47 Identities=19% Similarity=0.179 Sum_probs=36.4
Q ss_pred cccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhcccccc
Q psy9770 22 ENESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKNIA 68 (811)
Q Consensus 22 ~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~~~ 68 (811)
...++.+||.+||-|+.-|||-|.-|-.++|.-=+.+..++.+....
T Consensus 8 ~~~~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L 54 (78)
T 3efg_A 8 RDQELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHL 54 (78)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34568899999999999999999888888777666666666555544
No 367
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=80.99 E-value=1.4 Score=29.74 Aligned_cols=31 Identities=29% Similarity=0.272 Sum_probs=26.8
Q ss_pred cccchhhhHHHHHHHHHhcchhHHHHHHHHH
Q psy9770 22 ENESLRERVSDLEKKVLEHGDEIVCLRSTLA 52 (811)
Q Consensus 22 ~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a 52 (811)
.+..|..||.+||.++-+.|-||.-|+.-|-
T Consensus 12 ~n~~L~~kv~~Le~~c~~~eQEieRL~~LLk 42 (48)
T 3vmx_A 12 INIQLATKIQHLEFSCSEKEQEIERLNKLLK 42 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 4566899999999999999999999887653
No 368
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=80.77 E-value=1.4 Score=46.43 Aligned_cols=45 Identities=31% Similarity=0.459 Sum_probs=40.5
Q ss_pred ccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhccccc
Q psy9770 23 NESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKNI 67 (811)
Q Consensus 23 ~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~~ 67 (811)
+.+|+.|+.+|+.+|+.|=.=|.+||+.|+|.+-.|..||.--.+
T Consensus 112 S~ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDIdi 156 (562)
T 3ghg_A 112 SEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDI 156 (562)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347999999999999999999999999999999999999976554
No 369
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=77.84 E-value=2 Score=29.60 Aligned_cols=29 Identities=31% Similarity=0.336 Sum_probs=25.4
Q ss_pred ccchhhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 23 NESLRERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 23 ~~~~~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
|..|...|..||.++-++|.||.-|+.-|
T Consensus 20 n~~L~~kv~~Le~~c~e~eQEieRL~~LL 48 (58)
T 3a2a_A 20 NVQLAAKIQHLEFSCSEKEQEIERLNKLL 48 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55688999999999999999999888654
No 370
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=77.33 E-value=1e+02 Score=35.00 Aligned_cols=241 Identities=11% Similarity=0.013 Sum_probs=118.6
Q ss_pred EEEE-EcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCCccc----------cEEEEEEecCCCCcEEEEE
Q psy9770 303 KCLS-IHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFER----------SISCLSFSKADGGTFLCAV 371 (811)
Q Consensus 303 ~~la-~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~----------~V~~l~fs~~~dg~~Lasv 371 (811)
..+. ++||+++++.+-..| ......|+++|+.+++.+.- +... ....++|.. +..++++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~---G~d~~~~~~~d~~t~~~~~~----~~~~~~k~~~~~~~~~~~~~W~d--~~~~~~~~ 202 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFG---GKDEMFFREWDLEKKDFVKN----GFEPITNSGKLLEGKFTYPTWIN--KDTIIFNL 202 (711)
T ss_dssp EEEEECSSSTTEEEEEEEET---TCSEEEEEEEETTTTEECTT----CSCCBCTTCCBCCEETCCEEEEE--TTEEEECC
T ss_pred eceeecCCCCCEEEEEeCCC---CCceeEEEEEECCcCCcCCC----CcccccccccccccccceeeEEC--CCEEEEEe
Confidence 3444 899999887765544 12234899999999987631 2221 113447764 33444421
Q ss_pred -------e-CCCCceEEEEEcccCCCcceEEEeeeCCCc-EEEEEecCCCCC----eEEEEC-C---CcEEEEEEcCC-c
Q psy9770 372 -------D-EGNDYNISVWDWQKSDRGHKITETKCSVDT-VVAAEFHPLDRN----NIVTCG-K---SHINFWTIDAG-G 433 (811)
Q Consensus 372 -------~-~s~d~~i~vWd~~~~~~~~~~~~~~~~~~~-V~~v~fsp~~~~----ll~~~~-d---~~i~iwd~~~~-~ 433 (811)
+ ......|+.|.+-+.... -...+...... -.....++++.. ++++.+ + ..+.+.+.+.. .
T Consensus 203 ~~~~~~~~~~~~~~~v~~~~~Gt~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 281 (711)
T 4hvt_A 203 VLHKNEITSSLYPNSLYIWKRGESIEK-AKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNL 281 (711)
T ss_dssp CCSTTCBCTTSSBCEEEEEETTSCGGG-CEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSC
T ss_pred CCCCCCcCcCCCCCEEEEEECCCChHH-CeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCC
Confidence 0 112356777776554211 12223332232 334555666664 344433 2 23444444321 2
Q ss_pred eeeeecccccccCCCCceEEEEEEcCCCcEEE-E----------cCCCcEEEEecCCce--------EEEEeecccccce
Q psy9770 434 TLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLS-G----------DSNGNIIVWTRGSNT--------ISKFIRNVHEGSV 494 (811)
Q Consensus 434 ~~~~~~~~~~~l~~~~~~v~~l~~s~~g~lls-g----------~~dg~I~vwd~~~~~--------~~~~~~~~h~~~V 494 (811)
.+.+.. . .. ... +....++.++. . ...+.|.+.++.+.. ....+.......+
T Consensus 282 ~~~~l~---~--~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (711)
T 4hvt_A 282 KLQKIN---M--PS-DAT---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVF 352 (711)
T ss_dssp EEEECC---S--CT-TCE---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEE
T ss_pred cceEee---c--CC-cce---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeE
Confidence 222221 1 11 111 22344556432 1 246789999887642 2222432345567
Q ss_pred EEEEEecCCcEEEEecCCC--cEEEEeCCCCCc-cce-eeeccccCCeEEEeeCCC-CeEEE-Ee---CCCeEEEEEcc
Q psy9770 495 FSICVLKEGSIISAGGKDG--RLLQFDSNLQPT-GYE-AQIAEHLGGIRTVSEGRG-SQLIV-GT---TRNCILVGSLN 564 (811)
Q Consensus 495 ~~l~~s~dg~~l~s~s~dg--~I~~wd~~~~~~-~~~-~~~~~~~~~v~~l~~~~~-~~l~~-~~---~~~~i~~~d~~ 564 (811)
..+.+..+ .++++...++ .|.++++..+.. ... ..++. .+.+......++ +.+++ .+ .-..++.+|+.
T Consensus 353 ~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 353 NFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 88888876 5666666676 466777654431 011 22332 234554444443 23333 22 23577777766
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=76.35 E-value=62 Score=31.86 Aligned_cols=190 Identities=10% Similarity=-0.021 Sum_probs=111.3
Q ss_pred eCCCCeEEEEeCCCeEEEEEc---cCCceeeeeecccceEEEEECC--CCCeEEEEECCCeEEEEeCCCCc------EEE
Q psy9770 543 EGRGSQLIVGTTRNCILVGSL---NLGFSPVVLGHTDELWALAAHP--SLSQFLTAGFDRIVQLWDSMSHS------VVW 611 (811)
Q Consensus 543 ~~~~~~l~~~~~~~~i~~~d~---~~~~~~~~~~h~~~v~~l~~sp--~~~~l~s~s~dg~v~iwd~~~~~------~~~ 611 (811)
......++..+..|.++.... .......+......|..+.. + +..+++..+.+|.++-..+..-. ...
T Consensus 32 ~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i 110 (276)
T 3no0_A 32 VPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKSREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPII 110 (276)
T ss_dssp EETTSCEEEEETTSEEEEECSHHHHTSEECCCSSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECS
T ss_pred ECCCCEEEEEcCCCeEEEEEhhhCccCcccccCCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEE
Confidence 444567788888887776443 21110001223456666644 3 46789999999999998865432 111
Q ss_pred EecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcc---------eeEEecCCCCCeEEEEEccCCCEEEEEecCCcE
Q psy9770 612 SKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETRE---------AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYI 682 (811)
Q Consensus 612 ~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~---------~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I 682 (811)
.+.-...+..+........|+..+..|.+..++...-. ....+.. ...|..+...+++.+|+..+..|.+
T Consensus 111 ~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~ 189 (276)
T 3no0_A 111 KLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRV 189 (276)
T ss_dssp CCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCE
T ss_pred ecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcE
Confidence 12334567777666667789999999999888764321 1112222 3556666655667788888999999
Q ss_pred EEEEecCCC---cceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEE--EECCC
Q psy9770 683 YVYEVSGDS---RKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLY--WNAGT 735 (811)
Q Consensus 683 ~iwd~~~~~---~~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~i--Wd~~~ 735 (811)
+...+..-. +...-+..+ ...+.+..+....+...++..+.+|.+.. +++..
T Consensus 190 kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 190 KKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 998875421 100111111 22334444433333345666667777777 77654
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=76.00 E-value=63 Score=31.80 Aligned_cols=144 Identities=11% Similarity=0.088 Sum_probs=87.0
Q ss_pred CCCeEEEEeCCCeEEEEEccCCc-----eeee-eecccceEEEEECCCCCeEEEEECCCeEEEEeCCC---------CcE
Q psy9770 545 RGSQLIVGTTRNCILVGSLNLGF-----SPVV-LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMS---------HSV 609 (811)
Q Consensus 545 ~~~~l~~~~~~~~i~~~d~~~~~-----~~~~-~~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~---------~~~ 609 (811)
++..++..+..|.++...+..-. ...+ ..-.+.+..+........++..+..|.+..+.... |..
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~ 158 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQ 158 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEE
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEE
Confidence 45688899999999988865421 1111 11234566666655667888899999988887532 111
Q ss_pred EEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcc-------eeEEecCCCCCeEEEEEccCCCEEEEEecCCcE
Q psy9770 610 VWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETRE-------AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYI 682 (811)
Q Consensus 610 ~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~-------~~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I 682 (811)
...+.....+..+...+++..++..+..|.++...+.... -+..+ ...+.+..+....+...++..+.+|.+
T Consensus 159 ~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ 237 (276)
T 3no0_A 159 GIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKA 237 (276)
T ss_dssp CCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCE
T ss_pred EEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeE
Confidence 1123334567776666667788899999998888765322 22222 223344444333333456666777777
Q ss_pred EE--EEecC
Q psy9770 683 YV--YEVSG 689 (811)
Q Consensus 683 ~i--wd~~~ 689 (811)
.. +++..
T Consensus 238 ir~~~~~~~ 246 (276)
T 3no0_A 238 FYDKINQKD 246 (276)
T ss_dssp EEEEEEGGG
T ss_pred EEeeeCHHH
Confidence 77 76654
No 373
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=75.95 E-value=1.3 Score=32.65 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=25.8
Q ss_pred ccccccchhhhHHHHHHHHHhcchhHHHHHHHHHHH
Q psy9770 19 LETENESLRERVSDLEKKVLEHGDEIVCLRSTLADV 54 (811)
Q Consensus 19 ~~~~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~ 54 (811)
++.+..+|..+-.+|+.++...+.|+..||.-|-||
T Consensus 28 le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll~e~ 63 (63)
T 1ci6_A 28 LTGECKELEKKNEALKERADSLAKEIQYLKDLIEEV 63 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 344556677777777778888888888888776653
No 374
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=74.82 E-value=76 Score=32.14 Aligned_cols=225 Identities=11% Similarity=-0.027 Sum_probs=124.0
Q ss_pred EEEEcCCCcEEEEecCCc-------eEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEe---CCCCCc---cc--
Q psy9770 463 VLSGDSNGNIIVWTRGSN-------TISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFD---SNLQPT---GY-- 527 (811)
Q Consensus 463 llsg~~dg~I~vwd~~~~-------~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd---~~~~~~---~~-- 527 (811)
+++.+.+|.|+--.+.+. .-...+.......+..+........|+.-+..|.++... +..... ..
T Consensus 6 ~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i 85 (327)
T 3uc1_A 6 VVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHV 85 (327)
T ss_dssp EEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEH
T ss_pred EEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEH
Confidence 457777787776553221 111111112344455554444455555566677665543 332211 00
Q ss_pred --eeeeccccCCeEEEe-eC---CCCeEEEEeCCCeEEEEEccCCc------ee--eeeecccceEEEEECCCCCeEEEE
Q psy9770 528 --EAQIAEHLGGIRTVS-EG---RGSQLIVGTTRNCILVGSLNLGF------SP--VVLGHTDELWALAAHPSLSQFLTA 593 (811)
Q Consensus 528 --~~~~~~~~~~v~~l~-~~---~~~~l~~~~~~~~i~~~d~~~~~------~~--~~~~h~~~v~~l~~sp~~~~l~s~ 593 (811)
...+.. ...|..+. .. ++..++..+..|.++...+..-. .. .+.. .+.+..+........|+..
T Consensus 86 ~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~ 163 (327)
T 3uc1_A 86 ANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLV 163 (327)
T ss_dssp HHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEE
T ss_pred HHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEE
Confidence 111222 23344443 33 46789999999999988765411 11 1112 3455555555556788888
Q ss_pred ECCCeEEEEeCC--CCc---------EEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcce-------eEEe-
Q psy9770 594 GFDRIVQLWDSM--SHS---------VVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREA-------YSIH- 654 (811)
Q Consensus 594 s~dg~v~iwd~~--~~~---------~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~-------~~~~- 654 (811)
+..|.+..+... .-. ....+.....|.++..-+++..|+..+..|.++...+..... +..+
T Consensus 164 T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~ 243 (327)
T 3uc1_A 164 SANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVM 243 (327)
T ss_dssp ETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSC
T ss_pred ECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEE
Confidence 899998888776 211 111123345677777777777899999999998887653221 2222
Q ss_pred -cCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecC
Q psy9770 655 -TDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSG 689 (811)
Q Consensus 655 -~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~ 689 (811)
......+..+....+...|+..+.+|.+.-+....
T Consensus 244 l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 244 YDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred ecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 22133455554444455666677888887777654
No 375
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=74.16 E-value=3.1 Score=26.40 Aligned_cols=25 Identities=24% Similarity=0.413 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHhcchhHHHHHHHHH
Q psy9770 28 ERVSDLEKKVLEHGDEIVCLRSTLA 52 (811)
Q Consensus 28 ~r~~~le~~~~~~~~e~~~l~~~~a 52 (811)
+-+++||..+|..|..+..|||-|-
T Consensus 20 eelaaleselqalekklaalksklq 44 (48)
T 1g6u_A 20 EELAALESELQALEKKLAALKSKLQ 44 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578888888888888888888663
No 376
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=74.13 E-value=1.3e+02 Score=34.66 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=36.3
Q ss_pred ceEEEEEEcCCC--cEEEEcCCCcEEEEecCCceEEEEeecc------cccceEEEEEecC-CcEEEEe
Q psy9770 450 KYVTCLAFTQGG--EVLSGDSNGNIIVWTRGSNTISKFIRNV------HEGSVFSICVLKE-GSIISAG 509 (811)
Q Consensus 450 ~~v~~l~~s~~g--~llsg~~dg~I~vwd~~~~~~~~~~~~~------h~~~V~~l~~s~d-g~~l~s~ 509 (811)
..|.+|+++|.. .+++++..|.|...+-. ++.-..+... ....|.+|++.|. ...++.+
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~Dg-G~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~ 82 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAG-TSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLA 82 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETT-TTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCC-CCCeeECccCCCcccccCCceeEEEECCCCCCEEEEE
Confidence 569999999864 36788887877776543 3322223211 1346999999884 2334333
No 377
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.79 E-value=52 Score=39.07 Aligned_cols=38 Identities=16% Similarity=-0.122 Sum_probs=32.5
Q ss_pred CCccceEEecCCCCEEEEEcCCCcEEEEeCCCCCCCCc
Q psy9770 771 GTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQPKLC 808 (811)
Q Consensus 771 ~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~~~~ 808 (811)
...|.+++..++..+|++-+.|+++|||++.+++..+.
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 44677888888999999999999999999999876654
No 378
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=72.85 E-value=72 Score=30.98 Aligned_cols=142 Identities=6% Similarity=-0.099 Sum_probs=81.0
Q ss_pred EEEEecCCCcEEEEeCCCCCccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCC------ce---eee-eec
Q psy9770 505 IISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLG------FS---PVV-LGH 574 (811)
Q Consensus 505 ~l~s~s~dg~I~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~------~~---~~~-~~h 574 (811)
.+++.+.+|.|+--....... ....+.....-+..+.......++..+..|.++.+....- -. ..+ ...
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~-~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDA-PGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPP 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCS-TTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCT
T ss_pred EEEEEeCCCEEEEeeCCcCCc-eeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCC
Confidence 344566677766554432111 1122333333334444555678888899998887764321 00 011 122
Q ss_pred ccceEEEEECCCCCeEEEEECCCeEEEEeCCCC-------cEEEEecCCCCeEEEEEc-CCCCEEEEEEeCCeEEEEecC
Q psy9770 575 TDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH-------SVVWSKDIAEQAQSATFS-PDGSIIIVGCIAGRWLVMDSE 646 (811)
Q Consensus 575 ~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~-------~~~~~~~~~~~v~~~~~s-pdg~~la~g~~dg~i~i~d~~ 646 (811)
...|.++....+..+|+.++..|.++...+..- .....+.-...+..+... .++..|+..+.+|.+..|+..
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 346666654445667889999999999886431 122222223455555555 345678888899998888875
Q ss_pred C
Q psy9770 647 T 647 (811)
Q Consensus 647 ~ 647 (811)
.
T Consensus 163 e 163 (256)
T 1zvt_A 163 D 163 (256)
T ss_dssp G
T ss_pred H
Confidence 4
No 379
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=72.53 E-value=3.3 Score=25.36 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=21.0
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
|.|||.+|=.+-...|+|+.-||+-|
T Consensus 5 LE~kVEeLl~~n~~Le~EV~RLk~Ll 30 (33)
T 3m48_A 5 LEAKVEELLSKNWNLENEVARLKKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 67888888888888888888888754
No 380
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=72.19 E-value=1.1 Score=29.95 Aligned_cols=27 Identities=26% Similarity=0.476 Sum_probs=15.8
Q ss_pred chhhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 25 SLRERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 25 ~~~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
++++|=.+||+|+-..|+=|..|...|
T Consensus 13 el~~r~e~LE~Ri~~LE~KLd~L~~~l 39 (43)
T 2pnv_A 13 DLNERSEDFEKRIVTLETKLETLIGSI 39 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666666665555555443
No 381
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=71.76 E-value=1.2e+02 Score=33.07 Aligned_cols=151 Identities=12% Similarity=0.115 Sum_probs=83.3
Q ss_pred ecccceEEEEECCCC--CeEEEEECCC----eEEEEeCCCCcEEEEecC---CCCeEEEEEcCCC--CEEEEEEeCCeEE
Q psy9770 573 GHTDELWALAAHPSL--SQFLTAGFDR----IVQLWDSMSHSVVWSKDI---AEQAQSATFSPDG--SIIIVGCIAGRWL 641 (811)
Q Consensus 573 ~h~~~v~~l~~sp~~--~~l~s~s~dg----~v~iwd~~~~~~~~~~~~---~~~v~~~~~spdg--~~la~g~~dg~i~ 641 (811)
+|...+....|.|+. ..++.+.+++ -..+.|..+++.++.... .+......|.|+. ..+.+ ++ .
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~~pG~E~w~---~~--~ 435 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDPRYPGQEVWA---NG--S 435 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCTTSSSCEEEE---TT--E
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCCCCCceEEEe---cC--c
Confidence 888888888899874 4666666542 355789999999988653 2455555666653 33333 22 4
Q ss_pred EEecCCcceeEEecCCCCCeEEEEEccCC-CEEEEEecCCcEEEEEecCCCcceeEEEEecC-------CCCCeeEEEeC
Q psy9770 642 VMDSETREAYSIHTDGNEPIQVVKFSPDG-KLLALGSRDNYIYVYEVSGDSRKYSRVGRCTG-------HSSFITHLDWS 713 (811)
Q Consensus 642 i~d~~~~~~~~~~~~~~~~i~~i~~spdg-~~lasgs~dg~I~iwd~~~~~~~~~~~~~~~~-------h~~~V~~l~~s 713 (811)
+|+.. ++.+.... ....-..+-|..|. +.|+- .+.|.-|+...+. ...+.++.+ ...+.....+-
T Consensus 436 l~~~~-G~~i~~~~-p~~~N~~i~WdGDl~relld---~~~i~k~~~~~~~--~~~l~~~~g~~snngtk~~P~l~aDi~ 508 (591)
T 2zux_A 436 LYSAK-GVKIGSGV-PSSTNFGIWWDGDLLREQLD---SNRIDKWDYQNGV--SKNMLTASGAAANNGTKATPTLQADLL 508 (591)
T ss_dssp EECTT-SCBCSSCC-CSCCSEEECCSSSSSCEEEE---TTEEEEEETTTTE--EEEEEECTTEECBSGGGCBCSEEECCS
T ss_pred eECCC-CCEecCCC-CCCcceeEEECCCCcHhhhC---CceEEecccCCCc--eeEEEeecccccCCCCCCCEeeEEecc
Confidence 67754 44443321 11122346666665 33332 3467778765542 223333332 12233333444
Q ss_pred CCCC--eEEEecCCceEEEEECCC
Q psy9770 714 EDSM--YIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 714 pdg~--~L~s~s~Dg~i~iWd~~~ 735 (811)
-|.+ .|+-...+..|+||....
T Consensus 509 GDwREEvI~~t~D~~~LrIYtt~~ 532 (591)
T 2zux_A 509 GDWREEVVWRTEDSSALRIYTTTI 532 (591)
T ss_dssp SSSSCEEEEEETTSSEEEEECCCC
T ss_pred ccCeeEEEEEeCCCCeEEEEeCCC
Confidence 4443 333344566899997643
No 382
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=71.46 E-value=98 Score=31.94 Aligned_cols=236 Identities=8% Similarity=-0.056 Sum_probs=127.5
Q ss_pred ecCCcEEEEecCCCcEEEEeCCCCC-------ccceeeeccccCCeEEEeeCCCCeEEEEeCCCeEEEEEccCC------
Q psy9770 500 LKEGSIISAGGKDGRLLQFDSNLQP-------TGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLG------ 566 (811)
Q Consensus 500 s~dg~~l~s~s~dg~I~~wd~~~~~-------~~~~~~~~~~~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~------ 566 (811)
-++..++++.+.+|.|+--.+.... -.....+.....-+..+.......++..+..|.++.+....-
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 4567788889999999876542111 111223333222233333555677888999998887764321
Q ss_pred --c---eeee-eecccceEEEEEC---CCCCeEEEEECCCeEEEEeCCCCc-------EEEEecCCCCeEEEEEcCCCCE
Q psy9770 567 --F---SPVV-LGHTDELWALAAH---PSLSQFLTAGFDRIVQLWDSMSHS-------VVWSKDIAEQAQSATFSPDGSI 630 (811)
Q Consensus 567 --~---~~~~-~~h~~~v~~l~~s---p~~~~l~s~s~dg~v~iwd~~~~~-------~~~~~~~~~~v~~~~~spdg~~ 630 (811)
- ...+ ......|.++... .+..+|+.++..|.++...+.... ....+.-...+..+........
T Consensus 84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~ 163 (370)
T 3l6v_A 84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRD 163 (370)
T ss_dssp SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCE
T ss_pred cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCce
Confidence 0 0111 1223455555433 245689999999999998754321 1111223455666666566668
Q ss_pred EEEEEeCCeEEEEecCCcce-------eEEec-CCCCCeEEEEEcc----------------------------------
Q psy9770 631 IIVGCIAGRWLVMDSETREA-------YSIHT-DGNEPIQVVKFSP---------------------------------- 668 (811)
Q Consensus 631 la~g~~dg~i~i~d~~~~~~-------~~~~~-~~~~~i~~i~~sp---------------------------------- 668 (811)
|+..+.+|.+..|+...-.. +..+. .....|..+...+
T Consensus 164 i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~ 243 (370)
T 3l6v_A 164 VLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADN 243 (370)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC--------------------------------
T ss_pred EEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccccc
Confidence 88889999988887653211 11111 1234455554443
Q ss_pred -CCCEEEEEecCCcEEEEEecCCCc-----ceeEEEEecCCCCCeeEEEeCCCCCeEEEecCCceEEEEECCC
Q psy9770 669 -DGKLLALGSRDNYIYVYEVSGDSR-----KYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGT 735 (811)
Q Consensus 669 -dg~~lasgs~dg~I~iwd~~~~~~-----~~~~~~~~~~h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~ 735 (811)
++.+|++.+..|..+...+..-.. .......+....+.+..+.+..+...|+..+..|.+.-..+..
T Consensus 244 ~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~~ 316 (370)
T 3l6v_A 244 GDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGSE 316 (370)
T ss_dssp ---CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGGG
T ss_pred cCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHhh
Confidence 456788889999999888764210 0011112222233444443333444454555666666565543
No 383
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=70.64 E-value=1.7 Score=32.79 Aligned_cols=26 Identities=19% Similarity=0.307 Sum_probs=20.7
Q ss_pred hhHHHHHHHHHhcchhHHHHHHHHHH
Q psy9770 28 ERVSDLEKKVLEHGDEIVCLRSTLAD 53 (811)
Q Consensus 28 ~r~~~le~~~~~~~~e~~~l~~~~a~ 53 (811)
..+.+||.|+.+.|.+|.-|++.|++
T Consensus 44 ~~~~~L~~ri~~Le~~l~~l~~~l~~ 69 (70)
T 1zme_C 44 KYLQQLQKDLNDKTEENNRLKALLLE 69 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34788888888888888888887764
No 384
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=68.59 E-value=7 Score=24.36 Aligned_cols=28 Identities=21% Similarity=0.431 Sum_probs=21.1
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTLAD 53 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~a~ 53 (811)
|.|+|.+|=.+-...|+|..-||+-|+.
T Consensus 6 LE~KVEeLl~~~~~Le~eV~RLk~ll~~ 33 (36)
T 1kd8_B 6 LKAKVEELKSKLWHLKNKVARLKKKNAE 33 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 6677777777777778888888877664
No 385
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=68.44 E-value=1.2e+02 Score=33.40 Aligned_cols=60 Identities=13% Similarity=0.193 Sum_probs=44.2
Q ss_pred ceEEEEEEcCCCcEEEEcCC-------------CcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEe
Q psy9770 450 KYVTCLAFTQGGEVLSGDSN-------------GNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAG 509 (811)
Q Consensus 450 ~~v~~l~~s~~g~llsg~~d-------------g~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~ 509 (811)
.....|+|.++|.|..+.+. ..|..++..+++....+.......++.++|+||++.|+.+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 45788999999996653322 2577778878887776652234679999999999988754
No 386
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=67.81 E-value=1.7e+02 Score=33.26 Aligned_cols=231 Identities=9% Similarity=0.019 Sum_probs=119.5
Q ss_pred EecCCcEEEEe-----cCCCcEEEEeCCCCCccceeeec-cccC------CeEEEeeCCCCeEEEEeC-----------C
Q psy9770 499 VLKEGSIISAG-----GKDGRLLQFDSNLQPTGYEAQIA-EHLG------GIRTVSEGRGSQLIVGTT-----------R 555 (811)
Q Consensus 499 ~s~dg~~l~s~-----s~dg~I~~wd~~~~~~~~~~~~~-~~~~------~v~~l~~~~~~~l~~~~~-----------~ 555 (811)
++|++++++.+ +.-..++++|+.+++... -.+. .... ....+++.+++.+++++. .
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~-~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK-NGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT-TCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC-CCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 67888766542 223479999999887622 1222 1111 112234555556665431 2
Q ss_pred CeEEEEEccCCc---eeeeeecccce-EEEEECCCCCe-----EEEEECC---CeEEEEeCCC--CcEEEEecCCCCeEE
Q psy9770 556 NCILVGSLNLGF---SPVVLGHTDEL-WALAAHPSLSQ-----FLTAGFD---RIVQLWDSMS--HSVVWSKDIAEQAQS 621 (811)
Q Consensus 556 ~~i~~~d~~~~~---~~~~~~h~~~v-~~l~~sp~~~~-----l~s~s~d---g~v~iwd~~~--~~~~~~~~~~~~v~~ 621 (811)
..++.|.+.+.. ..++.+....+ .....++++++ +++.+.+ ..+.+.+... ++. ..+..+....
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~- 293 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINMPSDAT- 293 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCSCTTCE-
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeecCCcce-
Confidence 468888877652 22343333332 34455666663 4444422 4566666553 332 2233333222
Q ss_pred EEEcCCCCEEEEE----------EeCCeEEEEecCCcc-------eeEE-ec-CCCCCeEEEEEccCCCEEEEEecCCc-
Q psy9770 622 ATFSPDGSIIIVG----------CIAGRWLVMDSETRE-------AYSI-HT-DGNEPIQVVKFSPDGKLLALGSRDNY- 681 (811)
Q Consensus 622 ~~~spdg~~la~g----------~~dg~i~i~d~~~~~-------~~~~-~~-~~~~~i~~i~~spdg~~lasgs~dg~- 681 (811)
+..+.++.+++.. ...+.|.+.|+.++. .... +. .....+..+.+..+ .++++...++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~ 372 (711)
T 4hvt_A 294 LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVA 372 (711)
T ss_dssp EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEE
T ss_pred EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEE
Confidence 2334455554422 246789999987642 2222 32 23456778888866 56677677765
Q ss_pred -EEEEEecCCCcceeEEEEecCCCCCeeEEEeCCCCCe-EEEecC---CceEEEEECC
Q psy9770 682 -IYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMY-IRSNSG---DYELLYWNAG 734 (811)
Q Consensus 682 -I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~spdg~~-L~s~s~---Dg~i~iWd~~ 734 (811)
|+++++.++......+..+.. .+.+..+.+++++.. +++.+. -+.+..+|+.
T Consensus 373 ~l~~~~~~~g~~~~~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 373 KVVTFTLENEQWTKPVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEECEETTEECCCEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECCCCceEEEeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 666776654211111011221 245766777777654 444332 3567778776
No 387
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=67.39 E-value=64 Score=35.73 Aligned_cols=59 Identities=14% Similarity=0.192 Sum_probs=44.6
Q ss_pred eEEEEEEcCCCcEEEEcCC-------------CcEEEEecCCceEEEEeecccccceEEEEEecCCcEEEEe
Q psy9770 451 YVTCLAFTQGGEVLSGDSN-------------GNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAG 509 (811)
Q Consensus 451 ~v~~l~~s~~g~llsg~~d-------------g~I~vwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~ 509 (811)
..-.|+|++.|.|+.+.+. ..+.+.+..+++....+.......++.++|+||++.|+..
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4577999999997655432 2356667778888887775556789999999999888743
No 388
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=66.98 E-value=3.8 Score=26.66 Aligned_cols=32 Identities=28% Similarity=0.370 Sum_probs=23.3
Q ss_pred cccccchhhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 20 ETENESLRERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 20 ~~~~~~~~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
++...+++.|.++||.||--.+.|=+-||--|
T Consensus 9 E~r~k~le~~naeLEervstLq~EN~mLRqvl 40 (42)
T 2oqq_A 9 ENRVKDLENKNSELEERLSTLQNENQMLRHIL 40 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 34455678888888888888888877777543
No 389
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=66.46 E-value=5 Score=37.41 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=32.6
Q ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhccc
Q psy9770 30 VSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSK 65 (811)
Q Consensus 30 ~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~ 65 (811)
+..||+|+++|+..|..++.+|++.=.|+..+|...
T Consensus 2 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (192)
T 2gkw_A 2 TGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETAS 37 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 458999999999999999999999999999999754
No 390
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=65.66 E-value=1.3e+02 Score=31.13 Aligned_cols=159 Identities=6% Similarity=0.043 Sum_probs=85.2
Q ss_pred ceEEEEECCCCCeEEEEECCCeEEEEeCCCC----------cEE-EEec-C-CCCeEEEEEcCCCCEEEEEEeCCeEEEE
Q psy9770 577 ELWALAAHPSLSQFLTAGFDRIVQLWDSMSH----------SVV-WSKD-I-AEQAQSATFSPDGSIIIVGCIAGRWLVM 643 (811)
Q Consensus 577 ~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~----------~~~-~~~~-~-~~~v~~~~~spdg~~la~g~~dg~i~i~ 643 (811)
.+..++++.-....+....||.|..|-.... ... ..+. . ...|..++.. ....++-..+|.|+.|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~w 183 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTW 183 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEe
Confidence 3455666666667777788999999964321 011 1111 1 1245555543 3355556678888888
Q ss_pred ecCCc-c----------eeEEec-CCCCCeEEEEEccCCCEEEEEecCCcEEEEEecCCCc-------ceeEEEEecC-C
Q psy9770 644 DSETR-E----------AYSIHT-DGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR-------KYSRVGRCTG-H 703 (811)
Q Consensus 644 d~~~~-~----------~~~~~~-~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~~~~-------~~~~~~~~~~-h 703 (811)
-.... + ....+. .....|..++......+.++-..||.|+.|-.....+ .......+.. .
T Consensus 184 G~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~ 263 (389)
T 3kci_A 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT 263 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGT
T ss_pred CCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccC
Confidence 64321 1 111111 1234566666644335566667899999997543211 0111112221 1
Q ss_pred CCCeeEEEeCCCCCeEEEecCCceEEEEECCCCccc
Q psy9770 704 SSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQI 739 (811)
Q Consensus 704 ~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~ 739 (811)
...|..++... .+.+....||.|+.|-....-++
T Consensus 264 ~~~v~~v~~G~--~hs~alt~~G~v~~wG~n~~GqL 297 (389)
T 3kci_A 264 GLGVVKVECGS--QFSVALTKSGAVYTWGKGDYHRL 297 (389)
T ss_dssp TSCEEEEEEET--TEEEEEETTSCEEEEECCGGGTT
T ss_pred CCcEEEEeCCC--CEEEEEeCCCeEEEEeCCCCCCC
Confidence 22466666543 34445568999999987654444
No 391
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=65.10 E-value=5.8 Score=24.43 Aligned_cols=26 Identities=12% Similarity=0.328 Sum_probs=19.5
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
|.|+|.+|=.+-...|+|+.-||+-|
T Consensus 6 LEdKVEeLl~~n~~Le~EV~RLk~LL 31 (34)
T 1uo4_A 6 IEDKGEEILSKLYHIENELARIKKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 66777777777777788887777654
No 392
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=64.96 E-value=5.9 Score=26.42 Aligned_cols=26 Identities=23% Similarity=0.282 Sum_probs=20.7
Q ss_pred ccccchhhhHHHHHHHHHhcchhHHH
Q psy9770 21 TENESLRERVSDLEKKVLEHGDEIVC 46 (811)
Q Consensus 21 ~~~~~~~~r~~~le~~~~~~~~e~~~ 46 (811)
+...+|.+||..||.|+......|+.
T Consensus 16 ~r~e~LE~Ri~~LE~KLd~L~~~l~a 41 (43)
T 2pnv_A 16 ERSEDFEKRIVTLETKLETLIGSIHA 41 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45678999999999999877666654
No 393
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=64.74 E-value=8 Score=23.61 Aligned_cols=26 Identities=15% Similarity=0.318 Sum_probs=19.3
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
|.|+|.+|=.+-...|+|+.-||+-|
T Consensus 5 LEdKVEell~~~~~le~EV~Rl~~ll 30 (33)
T 2wq1_A 5 LEDKIEENTSKIYHNTNEIARNTKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 66777777777777788877777654
No 394
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=64.57 E-value=5 Score=29.69 Aligned_cols=28 Identities=29% Similarity=0.347 Sum_probs=16.7
Q ss_pred cccchhhhHHHHHHHHHhcchhHHHHHH
Q psy9770 22 ENESLRERVSDLEKKVLEHGDEIVCLRS 49 (811)
Q Consensus 22 ~~~~~~~r~~~le~~~~~~~~e~~~l~~ 49 (811)
|..-|.+||.+||-|+.+.|-|=.+||.
T Consensus 16 EVevLKe~I~EL~e~~~qLE~EN~~Lk~ 43 (78)
T 1dip_A 16 EVEILKEQIRELVEKNSQLERENTLLKT 43 (78)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445666666666666666666555543
No 395
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=64.21 E-value=1.2e+02 Score=30.32 Aligned_cols=183 Identities=7% Similarity=-0.027 Sum_probs=104.9
Q ss_pred EEEEcCCCcEEEEecCCceE-------EEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCCcc---------
Q psy9770 463 VLSGDSNGNIIVWTRGSNTI-------SKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTG--------- 526 (811)
Q Consensus 463 llsg~~dg~I~vwd~~~~~~-------~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~~~--------- 526 (811)
+++.+.+|.|+-..+..... ...+.......+..+........++..+..|.++-+....-...
T Consensus 11 ~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i 90 (312)
T 1suu_A 11 VVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNI 90 (312)
T ss_dssp EEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBG
T ss_pred EEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcCh
Confidence 56788888888876543211 11111112334445544545555666788888777655321110
Q ss_pred -ceeeeccccCCeEEEe-e---CCCCeEEEEeCCCeEEEEEccCC-------cee-eeeecccceEEEEECCCCCeEEEE
Q psy9770 527 -YEAQIAEHLGGIRTVS-E---GRGSQLIVGTTRNCILVGSLNLG-------FSP-VVLGHTDELWALAAHPSLSQFLTA 593 (811)
Q Consensus 527 -~~~~~~~~~~~v~~l~-~---~~~~~l~~~~~~~~i~~~d~~~~-------~~~-~~~~h~~~v~~l~~sp~~~~l~s~ 593 (811)
....+... ..|..+. . .++..++..+..|.++...+..- ... .+. ..+.+..+........++..
T Consensus 91 ~~~l~l~~~-e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~-~~d~lv~~~~~~~~~~i~l~ 168 (312)
T 1suu_A 91 SELINLGDQ-EEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLN-DKDFVTSAEIVFKDEKVICL 168 (312)
T ss_dssp GGTSCCCTT-CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCC-TTCCEEEEEEECTTCEEEEE
T ss_pred hhccCCCCC-CEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecC-CCCEEEEEEEeCCCCEEEEE
Confidence 01122222 2333333 2 25677999999999998876431 111 122 24456666555556678889
Q ss_pred ECCCeEEEEeCCCC-------cEEEE--ecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCC
Q psy9770 594 GFDRIVQLWDSMSH-------SVVWS--KDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSET 647 (811)
Q Consensus 594 s~dg~v~iwd~~~~-------~~~~~--~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~ 647 (811)
+.+|.+..+....- +-+.. +.....+..+..-.++..|++.+..|....+++..
T Consensus 169 T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 169 SKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp ETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred eCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 99999988876431 11111 22345667766656667788889999999888754
No 396
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=63.90 E-value=8.4 Score=23.63 Aligned_cols=26 Identities=8% Similarity=0.216 Sum_probs=17.1
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
|.|+|.+|=++-...|+|..-||+-|
T Consensus 6 LEdKVEeLl~~~~~Le~EV~RLk~ll 31 (34)
T 3c3f_A 6 IEXKLEXILSXLYHXENEXARIXKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 56666666666666677776666644
No 397
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=63.22 E-value=8.9 Score=23.42 Aligned_cols=26 Identities=8% Similarity=0.377 Sum_probs=17.6
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
|.|+|.+|=++=...|+|+.-||+-|
T Consensus 5 LEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 5 IEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56677777666667777777776654
No 398
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=62.00 E-value=28 Score=41.39 Aligned_cols=40 Identities=8% Similarity=0.081 Sum_probs=35.8
Q ss_pred CCeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEecc
Q psy9770 300 DDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGI 347 (811)
Q Consensus 300 ~~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~ 347 (811)
..|.+++..++..+|.+-+.|+ ++|||++.+++++.+..+
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~--------~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDY--------KLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTC--------EEEEEETTTTEEEEEEEC
T ss_pred ceEEEEeecCCCcEEEEEECCC--------EEEEEECCCCCeEeeecc
Confidence 4678889999999999999999 999999999999988763
No 399
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=61.84 E-value=19 Score=39.51 Aligned_cols=60 Identities=12% Similarity=0.204 Sum_probs=44.2
Q ss_pred CCccceEEccCCcEEEEec--------------cEEEEEeCCCCceEEec-cC-CCCeEEEEEcCCCcEEEEeecc
Q psy9770 261 DCRSNLYLLPTGEIVYFVA--------------AVAVLYNVEEQTQRHYL-GH-TDDIKCLSIHPNKLLIATGQVA 320 (811)
Q Consensus 261 ~~~~~l~~spdg~~l~~~~--------------~~i~i~d~~~~~~~~~~-~h-~~~V~~la~spdg~~Lasg~~d 320 (811)
.+.++|.|.++|.+.+..+ +.|..++..+++.+.+. +. ...++.++|+||+++|.+.-..
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 3457899999998776332 27888888888775554 33 3679999999999988776543
No 400
>1pzq_A Erythronolide synthase; four helix bundle, homodimer, transferase; NMR {Saccharopolyspora erythraea} SCOP: a.34.3.1
Probab=61.63 E-value=11 Score=25.06 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=23.7
Q ss_pred cchhhhHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHH
Q psy9770 24 ESLRERVSDLEKKVLEHG--DEIVCLRSTLADVLRRLA 59 (811)
Q Consensus 24 ~~~~~r~~~le~~~~~~~--~e~~~l~~~~a~~~rr~~ 59 (811)
-|+-||+.+||+-+.... |--.-.---|--+|||-|
T Consensus 8 vdigdrldelekalealsaedghddvgqrlesllrrwn 45 (60)
T 1pzq_A 8 VDIGDRLDELEKALEALSAEDGHDDVGQRLESLLRRWN 45 (60)
T ss_dssp STTHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHhcccccccHHHHHHHHHHHHHh
Confidence 468899999999887642 222222334455788888
No 401
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=60.04 E-value=11 Score=23.22 Aligned_cols=24 Identities=25% Similarity=0.357 Sum_probs=11.1
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRS 49 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~ 49 (811)
|.|||.+|=++=++.|+|..-||+
T Consensus 6 LE~kVEeLl~~n~~Le~eV~rLk~ 29 (34)
T 2oxj_A 6 LEXKVXELLXKNXHLEXEVXRLKX 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHH
Confidence 344444444444444444444444
No 402
>4g1a_A AQ-C16C19 peptide; helical bundles, metallopeptide complexes, polynuclear metal CD(II), SELF-assembly, metal binding protein; 1.85A {Synthetic construct}
Probab=59.18 E-value=5.2 Score=23.14 Aligned_cols=22 Identities=27% Similarity=0.492 Sum_probs=15.5
Q ss_pred hhhhHHHHHHHHHhcchhHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCL 47 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l 47 (811)
|...+++|||++..-|..|..|
T Consensus 5 leqkiaaleqkcaaceqkiaal 26 (32)
T 4g1a_A 5 LEQKIAALEQKCAACEQKIAAL 26 (32)
T ss_dssp HHHHHHHHHHHTSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788888877777666544
No 403
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=58.13 E-value=13 Score=28.87 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhcc
Q psy9770 28 ERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESS 64 (811)
Q Consensus 28 ~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~ 64 (811)
+=|.+|.+|+|..|+|+.-....|.++.+.|..-|..
T Consensus 41 ~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLeeaek~ 77 (81)
T 1ic2_A 41 DELVALQKKLKGTEDELDKYSESLKDAQEKLELADKK 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466777788888888888888888888887765543
No 404
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=57.90 E-value=12 Score=22.97 Aligned_cols=16 Identities=31% Similarity=0.436 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHH
Q psy9770 44 IVCLRSTLADVLRRLA 59 (811)
Q Consensus 44 ~~~l~~~~a~~~rr~~ 59 (811)
+.-=|+.|++-+.||.
T Consensus 13 Ll~~~~~Le~eV~RL~ 28 (34)
T 2hy6_A 13 LASANYHLANAVARLA 28 (34)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHH
Confidence 3334555555555554
No 405
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=56.44 E-value=25 Score=39.05 Aligned_cols=57 Identities=12% Similarity=0.178 Sum_probs=43.3
Q ss_pred CccceEEccCCcEEEEec--------------cEEEEEeCCCCceEE-eccC-CCCeEEEEEcCCCcEEEEee
Q psy9770 262 CRSNLYLLPTGEIVYFVA--------------AVAVLYNVEEQTQRH-YLGH-TDDIKCLSIHPNKLLIATGQ 318 (811)
Q Consensus 262 ~~~~l~~spdg~~l~~~~--------------~~i~i~d~~~~~~~~-~~~h-~~~V~~la~spdg~~Lasg~ 318 (811)
+..||+|+|.|+++...+ +.+.+.+..+++.+. +.++ ..+++.++|+||++.|.+.-
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 457899999999776653 357788888877654 5555 57899999999998876653
No 406
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=56.36 E-value=11 Score=28.36 Aligned_cols=35 Identities=20% Similarity=0.108 Sum_probs=19.8
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHh
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQ 60 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~ 60 (811)
|.++|.+||...+....|...||..+..+--.|+.
T Consensus 34 LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~El~~ 68 (70)
T 1gd2_E 34 LETQVVTLKELHSSTTLENDQLRQKVRQLEEELRI 68 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444456667777766666555554
No 407
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=56.34 E-value=1.7e+02 Score=29.43 Aligned_cols=227 Identities=11% Similarity=0.056 Sum_probs=117.1
Q ss_pred CCc-EEEEcCCCcEEEEecCCce----EEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeC---CCCCc---c--
Q psy9770 460 GGE-VLSGDSNGNIIVWTRGSNT----ISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDS---NLQPT---G-- 526 (811)
Q Consensus 460 ~g~-llsg~~dg~I~vwd~~~~~----~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~---~~~~~---~-- 526 (811)
+.. +++.+.+|.|+--.+...+ ....++ ....+..+........|+..+..|.++-+.. ..... .
T Consensus 4 ~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk--e~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 4 SEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK--DTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp CCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC--TTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred CCcEEEEEeCCCEEEEeEHHHhhhcCccccccC--CCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 344 5577888888776543211 011122 2334444444444455555777887665544 21111 0
Q ss_pred --ceeeeccccCCeEEE-eeCC---CCeEEEEeCCCeEEEEEccCC-------ceeeee-ecccceEEEEECCCCCeEEE
Q psy9770 527 --YEAQIAEHLGGIRTV-SEGR---GSQLIVGTTRNCILVGSLNLG-------FSPVVL-GHTDELWALAAHPSLSQFLT 592 (811)
Q Consensus 527 --~~~~~~~~~~~v~~l-~~~~---~~~l~~~~~~~~i~~~d~~~~-------~~~~~~-~h~~~v~~l~~sp~~~~l~s 592 (811)
....+.. ...|..+ ...+ +..++..+..|.++...+..- -...+. ...+.+..+........++.
T Consensus 82 i~~~i~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l 160 (323)
T 1wp5_A 82 IANIIPIDR-DEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFL 160 (323)
T ss_dssp GGGTSCCCT-TCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEE
T ss_pred hhhccCCCC-CCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEE
Confidence 0111221 2234443 3332 557899999999998876421 111111 12245555555555667888
Q ss_pred EECCCeEEEEeCCCCc-------EEEE--ecCCCCeEEEEEcCCCC-EEEEEEeCCeEEEEecCCc-------ceeEEe-
Q psy9770 593 AGFDRIVQLWDSMSHS-------VVWS--KDIAEQAQSATFSPDGS-IIIVGCIAGRWLVMDSETR-------EAYSIH- 654 (811)
Q Consensus 593 ~s~dg~v~iwd~~~~~-------~~~~--~~~~~~v~~~~~spdg~-~la~g~~dg~i~i~d~~~~-------~~~~~~- 654 (811)
.+.+|.+..+....-. -+.. +.....|.++..-+++. .|++.+..|..+..++... +-+..+
T Consensus 161 ~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~ 240 (323)
T 1wp5_A 161 VTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILR 240 (323)
T ss_dssp EETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSC
T ss_pred EeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECee
Confidence 8889998888754311 1111 22334566665544455 7888888998888776542 111222
Q ss_pred --cCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecC
Q psy9770 655 --TDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSG 689 (811)
Q Consensus 655 --~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~ 689 (811)
+.....+..+....++..++..+..|.+..+.+..
T Consensus 241 ~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 241 ELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp CCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred ecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 12222444333333344455556777766666654
No 408
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=56.20 E-value=8.7 Score=38.74 Aligned_cols=44 Identities=18% Similarity=0.109 Sum_probs=38.5
Q ss_pred cchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhccccc
Q psy9770 24 ESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKNI 67 (811)
Q Consensus 24 ~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~~ 67 (811)
..+.+++..||..|..|+.+|+.|+..|...-.+|..|+++...
T Consensus 8 ~~~~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i~~ 51 (323)
T 1lwu_C 8 QKILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVD 51 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45888999999999999999999999999988888888776554
No 409
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=55.07 E-value=11 Score=28.23 Aligned_cols=40 Identities=28% Similarity=0.440 Sum_probs=24.7
Q ss_pred ccccccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Q psy9770 19 LETENESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRL 58 (811)
Q Consensus 19 ~~~~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~ 58 (811)
++.+|.+|.+||..||++++.=.-|=.-+|..|.-++-.|
T Consensus 12 ~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~L 51 (72)
T 3cve_A 12 VEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEIL 51 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777777888777777665555555555555444443
No 410
>1fzc_A Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: h.1.8.1 PDB: 1fzb_A* 1fza_A* 1fze_A* 1fzf_A* 1fzg_A* 1n86_A* 2h43_A* 2hlo_A* 2hod_A* 2hpc_A* 2q9i_A* 2xnx_A 2xny_A 2z4e_A* 3e1i_A* 1n8e_A 2oyh_A* 1ltj_A* 1lt9_A* 1re4_A* ...
Probab=54.83 E-value=6.6 Score=29.98 Aligned_cols=44 Identities=32% Similarity=0.462 Sum_probs=33.3
Q ss_pred cchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhccccc
Q psy9770 24 ESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKNI 67 (811)
Q Consensus 24 ~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~~ 67 (811)
.||+-|+..|-+||-+|-.-|..|+.-..|=|-.+..||---..
T Consensus 3 edLrrrI~~LkrkV~~q~~~i~~Lq~nvr~Q~vemkRLEVDIDI 46 (87)
T 1fzc_A 3 EDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDI 46 (87)
T ss_dssp ------CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 57999999999999999999999999999988888877755443
No 411
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=54.71 E-value=2.9e+02 Score=31.71 Aligned_cols=162 Identities=8% Similarity=0.042 Sum_probs=74.8
Q ss_pred CCCeEEEEEcCCC-cEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEeccCC-----ccccEEEEEEecCCCCcEEEEEe
Q psy9770 299 TDDIKCLSIHPNK-LLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGE-----FERSISCLSFSKADGGTFLCAVD 372 (811)
Q Consensus 299 ~~~V~~la~spdg-~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~-----h~~~V~~l~fs~~~dg~~Lasv~ 372 (811)
...|.+|+++|.. ..+..+...+ .|...+ ..|+.-..+.... ....|.+|++.|.+.+.+++..
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~g--------gv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~- 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIG--------GAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ- 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSS--------CEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE-
T ss_pred CCcEEEEEECCCCCCEEEEEecCC--------CEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe-
Confidence 4689999999952 3344444434 343333 3455444443101 1346999999984334444432
Q ss_pred CCCC--ceEEEEEcc-cCCCcceEEEeeeC-----C--CcEEEEEecCCCCCeEEEEC-CCcEEEEEEcCCceeeeeccc
Q psy9770 373 EGND--YNISVWDWQ-KSDRGHKITETKCS-----V--DTVVAAEFHPLDRNNIVTCG-KSHINFWTIDAGGTLYKKQGI 441 (811)
Q Consensus 373 ~s~d--~~i~vWd~~-~~~~~~~~~~~~~~-----~--~~V~~v~fsp~~~~ll~~~~-d~~i~iwd~~~~~~~~~~~~~ 441 (811)
+... ..-.||.-. .++....+ ..... . ..+..++++|.+...+.... .+. +|.-.++..-.+....
T Consensus 84 g~~~~~~~~~v~~S~DgG~TW~~~-~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~ 160 (789)
T 1sqj_A 84 GRYVGDEWAAFYVSEDRGQSFTIY-ESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTS 160 (789)
T ss_dssp CSCTTSSCCEEEEESSTTSEEEEE-ECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETT
T ss_pred CccCCCcccEEEEECCCCCcceec-cCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCcc
Confidence 2211 002344333 33311111 11100 1 13556788876554544444 332 4555544443333221
Q ss_pred ccccCCCCceEEEEEEcCCC--cEEEEcCC-CcEE
Q psy9770 442 FEMIRDKPKYVTCLAFTQGG--EVLSGDSN-GNII 473 (811)
Q Consensus 442 ~~~l~~~~~~v~~l~~s~~g--~llsg~~d-g~I~ 473 (811)
...+......+..+.+.|.. .++++..+ +.|+
T Consensus 161 ~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~ 195 (789)
T 1sqj_A 161 IPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMY 195 (789)
T ss_dssp SCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEE
T ss_pred CccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEE
Confidence 11101112457889998753 35565554 4443
No 412
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=54.01 E-value=1.2e+02 Score=36.83 Aligned_cols=36 Identities=17% Similarity=0.079 Sum_probs=30.2
Q ss_pred CeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCC
Q psy9770 706 FITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQ 741 (811)
Q Consensus 706 ~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~ 741 (811)
.+.+++..++..+|++.+.|+++++|++.+++++.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 445666677889999999999999999999987754
No 413
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=53.80 E-value=14 Score=26.27 Aligned_cols=27 Identities=26% Similarity=0.251 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHhcchhHHHHHHHHHHH
Q psy9770 28 ERVSDLEKKVLEHGDEIVCLRSTLADV 54 (811)
Q Consensus 28 ~r~~~le~~~~~~~~e~~~l~~~~a~~ 54 (811)
..+.+||.+|...+.|-.-|+..+..+
T Consensus 22 ~~~~~LE~~v~~L~~eN~~L~~~~~~L 48 (55)
T 1dh3_A 22 EYVKSLENRVAVLENQNKTLIEELKAL 48 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 458888888888888877777666543
No 414
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=53.77 E-value=14 Score=28.84 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=30.6
Q ss_pred hhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhc
Q psy9770 27 RERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLES 63 (811)
Q Consensus 27 ~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~ 63 (811)
.+=|..|++++++.+.|+.-||.-...+-.+|+.+++
T Consensus 46 i~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L~~ 82 (83)
T 1nkp_B 46 TEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALGG 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3457788999999999999999888888888887764
No 415
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.34 E-value=44 Score=40.68 Aligned_cols=39 Identities=15% Similarity=-0.114 Sum_probs=32.6
Q ss_pred CCCccceEEecCCCCEEEEEcCCCcEEEEeCCCCCCCCc
Q psy9770 770 DGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQPKLC 808 (811)
Q Consensus 770 h~~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~~~~ 808 (811)
....+.+++..++..+|++-+.|+++|||++.+++..+.
T Consensus 236 ~~~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 236 SPNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CTTCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred CcceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 345667778888999999999999999999999876554
No 416
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=53.33 E-value=18 Score=26.26 Aligned_cols=35 Identities=29% Similarity=0.199 Sum_probs=22.3
Q ss_pred hhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhh
Q psy9770 28 ERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLE 62 (811)
Q Consensus 28 ~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e 62 (811)
+++.+||.+|...+.|-..|++.+..+=..+..|.
T Consensus 22 ~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk 56 (61)
T 1t2k_D 22 VWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLK 56 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777777777777777776665555554443
No 417
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=52.88 E-value=19 Score=21.04 Aligned_cols=25 Identities=20% Similarity=0.381 Sum_probs=17.3
Q ss_pred hHHHHHHHHHhcchhHHHHHHHHHH
Q psy9770 29 RVSDLEKKVLEHGDEIVCLRSTLAD 53 (811)
Q Consensus 29 r~~~le~~~~~~~~e~~~l~~~~a~ 53 (811)
-+++|.|.+.....||..||--+|-
T Consensus 3 eiaalkqeiaalkkeiaalkfeiaa 27 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALKFEIAA 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567777777777777777766553
No 418
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=52.10 E-value=1.9e+02 Score=28.76 Aligned_cols=225 Identities=12% Similarity=0.008 Sum_probs=116.2
Q ss_pred EEEEcCCCcEEEEecCCceEEE-------EeecccccceEEEEEecCCcEEEEecCCCcEEEEeC---CCCCc---cc--
Q psy9770 463 VLSGDSNGNIIVWTRGSNTISK-------FIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDS---NLQPT---GY-- 527 (811)
Q Consensus 463 llsg~~dg~I~vwd~~~~~~~~-------~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~---~~~~~---~~-- 527 (811)
+++.+.+|.|+--.+...+... .+.......+..+........|+..+..|.++-+.. ..... ..
T Consensus 6 ~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i 85 (307)
T 1zi0_A 6 VVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPI 85 (307)
T ss_dssp EEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEG
T ss_pred EEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEh
Confidence 5577888888776654422211 111012234444444444445555777887666544 21111 00
Q ss_pred --eeeeccccCCeEEEe----eCCCCeEEEEeCCCeEEEEEccCC------c-e-eeeeecccceEEEEECCCCCeEEEE
Q psy9770 528 --EAQIAEHLGGIRTVS----EGRGSQLIVGTTRNCILVGSLNLG------F-S-PVVLGHTDELWALAAHPSLSQFLTA 593 (811)
Q Consensus 528 --~~~~~~~~~~v~~l~----~~~~~~l~~~~~~~~i~~~d~~~~------~-~-~~~~~h~~~v~~l~~sp~~~~l~s~ 593 (811)
...+. ....|..+. +.++..++..+..|.+....+..- - . ..+..+ +.+..+........++..
T Consensus 86 ~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~ 163 (307)
T 1zi0_A 86 VNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLF 163 (307)
T ss_dssp GGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEE
T ss_pred hhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEE
Confidence 11122 223344443 234567899999999998876421 1 1 112223 555555554455678888
Q ss_pred ECCCeEEEEeCCCC---------cEEEEecCCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcce---------eEEec
Q psy9770 594 GFDRIVQLWDSMSH---------SVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREA---------YSIHT 655 (811)
Q Consensus 594 s~dg~v~iwd~~~~---------~~~~~~~~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~---------~~~~~ 655 (811)
+.+|.+..++...- .....+.....|.++..-.++..|++.+..|.++-.++..... ...+.
T Consensus 164 T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~ 243 (307)
T 1zi0_A 164 SAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVT 243 (307)
T ss_dssp ETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCC
T ss_pred CCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEec
Confidence 88888888775421 1111123345677776555667788889999988887643211 11122
Q ss_pred CCCCCeEEEEEccCCCEEEEEecCCcEEEEEecC
Q psy9770 656 DGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSG 689 (811)
Q Consensus 656 ~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~ 689 (811)
...+.+-.+....+...|+..+.+|.+.-+.+..
T Consensus 244 ~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 244 ERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp TTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred CCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 2224444443333334455556667666666554
No 419
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=51.74 E-value=55 Score=36.98 Aligned_cols=37 Identities=16% Similarity=0.320 Sum_probs=31.1
Q ss_pred CeEEEEEcCCCcEEEEeeccCCCCCCCCCeEEEEeCCCCcEEEEecc
Q psy9770 301 DIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGI 347 (811)
Q Consensus 301 ~V~~la~spdg~~Lasg~~dg~~~~~~~~~I~iWd~~t~~~~~~l~~ 347 (811)
.|.|+.+ +..+|++-+.|. ++|+|++.+++++....+
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh--------~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNC--------HLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTC--------EEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCC--------eEEEEEcCCCceEEeecc
Confidence 4666655 367999999998 999999999999998875
No 420
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=51.42 E-value=14 Score=28.39 Aligned_cols=20 Identities=20% Similarity=0.368 Sum_probs=9.7
Q ss_pred cccchhhhHHHHHHHHHhcc
Q psy9770 22 ENESLRERVSDLEKKVLEHG 41 (811)
Q Consensus 22 ~~~~~~~r~~~le~~~~~~~ 41 (811)
+|.+|.+||..||++++.-.
T Consensus 21 rN~~Le~~v~~le~~Le~s~ 40 (79)
T 3cvf_A 21 RNAELEHQLRAMERSLEEAR 40 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHH
Confidence 44445555555555554433
No 421
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=50.76 E-value=9.9 Score=22.36 Aligned_cols=16 Identities=38% Similarity=0.590 Sum_probs=10.9
Q ss_pred cchhhhHHHHHHHHHh
Q psy9770 24 ESLRERVSDLEKKVLE 39 (811)
Q Consensus 24 ~~~~~r~~~le~~~~~ 39 (811)
-.|++||+-||--||+
T Consensus 16 q~lq~r~drle~tvqa 31 (32)
T 2akf_A 16 QKLQERLDRLEETVQA 31 (32)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 4567777777777664
No 422
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=50.63 E-value=15 Score=34.71 Aligned_cols=41 Identities=22% Similarity=0.296 Sum_probs=36.8
Q ss_pred chhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhccc
Q psy9770 25 SLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSK 65 (811)
Q Consensus 25 ~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~ 65 (811)
.+..|+..||+++|.-.+|+.-+++.||.+=|.++.+-|+.
T Consensus 175 ~lK~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~~~~~~ 215 (228)
T 3q0x_A 175 EVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQY 215 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999998776554
No 423
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=50.56 E-value=15 Score=21.15 Aligned_cols=21 Identities=19% Similarity=0.328 Sum_probs=10.4
Q ss_pred hhhhHHHHHHHHHhcchhHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVC 46 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~ 46 (811)
|...-++||.++|..|..+..
T Consensus 6 lekkcaalesklqalekklea 26 (31)
T 3ljm_A 6 LEKKCAALESKLQALEKKLEA 26 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334445555555555544443
No 424
>1aq5_A Matrilin-1, CMP, cartilage matrix protein; coiled-coil, heptad repeat, interchain disulfide bonds, oligomerization domain, trimer; NMR {Gallus gallus} SCOP: h.1.6.1
Probab=49.85 E-value=12 Score=25.36 Aligned_cols=25 Identities=28% Similarity=0.383 Sum_probs=21.1
Q ss_pred chhHHHHHHHHHHHHHHHHhhhccc
Q psy9770 41 GDEIVCLRSTLADVLRRLAQLESSK 65 (811)
Q Consensus 41 ~~e~~~l~~~~a~~~rr~~~~e~~~ 65 (811)
+.+|+-|..-|+++-+||.++|.+.
T Consensus 22 ~~~l~~Lt~kL~~vt~rle~lEnrl 46 (47)
T 1aq5_A 22 EELINTLQQKLEAVAKRIEALENKI 46 (47)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3578888888999999999999763
No 425
>2uwj_E Type III export protein PSCE; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=49.39 E-value=16 Score=26.94 Aligned_cols=29 Identities=31% Similarity=0.464 Sum_probs=23.0
Q ss_pred HHHHHHHHh----cchhH-HHHHHHHHHHHHHHH
Q psy9770 31 SDLEKKVLE----HGDEI-VCLRSTLADVLRRLA 59 (811)
Q Consensus 31 ~~le~~~~~----~~~e~-~~l~~~~a~~~rr~~ 59 (811)
..||+|++- +-.|| .-|+.||+||=|+|.
T Consensus 6 TnLE~~L~~~~~~~~~~i~~~L~qAl~~vKrqL~ 39 (70)
T 2uwj_E 6 TALETRLSVADGTHAAALRQRLQAALAECRRELA 39 (70)
T ss_dssp SHHHHHHTSSSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 479999988 33455 468999999999997
No 426
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=48.73 E-value=16 Score=29.71 Aligned_cols=42 Identities=19% Similarity=0.147 Sum_probs=34.0
Q ss_pred chhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhcccc
Q psy9770 25 SLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKN 66 (811)
Q Consensus 25 ~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~ 66 (811)
.+.+-|.+|-+|+|..|+|+..+...|.++...|...|....
T Consensus 41 ~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~ 82 (101)
T 3u1c_A 41 QLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAA 82 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567778899999999999999999999988887765543
No 427
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=47.07 E-value=27 Score=25.38 Aligned_cols=36 Identities=33% Similarity=0.298 Sum_probs=23.5
Q ss_pred hhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhh
Q psy9770 27 RERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLE 62 (811)
Q Consensus 27 ~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e 62 (811)
.+++.+||.+|...+.|-.-|++.+..+=..+..|.
T Consensus 21 k~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk 56 (62)
T 1jnm_A 21 LERIARLEEKVKTLKAQNSELASTANMLREQVAQLK 56 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777777777777777777776655555444443
No 428
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=46.94 E-value=20 Score=26.31 Aligned_cols=26 Identities=31% Similarity=0.282 Sum_probs=19.0
Q ss_pred hhhHHHHHHHHHhcchhHHHHHHHHH
Q psy9770 27 RERVSDLEKKVLEHGDEIVCLRSTLA 52 (811)
Q Consensus 27 ~~r~~~le~~~~~~~~e~~~l~~~~a 52 (811)
++++.+||.+|...+.|-..|++.++
T Consensus 29 ~~~~~~Le~~v~~L~~eN~~L~~ev~ 54 (63)
T 2dgc_A 29 LQRMKQLEDKVEELLSKNYHLENEVA 54 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46678888888887777777776544
No 429
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=46.81 E-value=7.2 Score=29.42 Aligned_cols=24 Identities=29% Similarity=0.314 Sum_probs=16.8
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRS 49 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~ 49 (811)
-..+|.+||+||...|..|.-|++
T Consensus 47 ~~~~~~~Le~ri~~Le~~l~~l~~ 70 (72)
T 2er8_A 47 KRARNEAIEKRFKELTRTLTNLTS 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC--
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhc
Confidence 457888888888888777766654
No 430
>1lwu_A Fibrinogen alpha-1 chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: h.1.8.1 PDB: 1n73_A*
Probab=46.41 E-value=27 Score=28.55 Aligned_cols=45 Identities=11% Similarity=0.259 Sum_probs=38.8
Q ss_pred cccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhcccc
Q psy9770 22 ENESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKN 66 (811)
Q Consensus 22 ~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~ 66 (811)
=..||+-||..|-+||-+|=--|..|+.-..|=|--+..||----
T Consensus 23 vsedLrrrIe~LkrKV~~Qvq~i~~Lq~nVrdQvveMkRLEVDID 67 (119)
T 1lwu_A 23 VLRELERRIIHLQRRINMQLQQLTLLQHNIKTQVSQILRVEVDID 67 (119)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 346799999999999999999999999999998887777775444
No 431
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=45.54 E-value=38 Score=20.86 Aligned_cols=30 Identities=33% Similarity=0.493 Sum_probs=23.9
Q ss_pred hhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhh
Q psy9770 28 ERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQL 61 (811)
Q Consensus 28 ~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~ 61 (811)
+|.+.||-||. |+.-=++.|.+=++||..+
T Consensus 1 eRMnQLE~kVE----eLl~~n~~Le~eV~rLk~l 30 (34)
T 2oxj_A 1 XRMXQLEXKVX----ELLXKNXHLEXEVXRLKXL 30 (34)
T ss_dssp -CHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHH----HHHHhhhhHHHHHHHHHHH
Confidence 48888999985 6777789999999999754
No 432
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=45.32 E-value=12 Score=23.80 Aligned_cols=17 Identities=6% Similarity=0.075 Sum_probs=13.4
Q ss_pred ccchhhhHHHHHHHHHh
Q psy9770 23 NESLRERVSDLEKKVLE 39 (811)
Q Consensus 23 ~~~~~~r~~~le~~~~~ 39 (811)
+.-++||+.+|||++-.
T Consensus 3 ~~~~~d~I~aiEQqiyv 19 (40)
T 1gp8_A 3 GDVSAANKDAIRKQMDA 19 (40)
T ss_dssp SCCHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHH
Confidence 34578999999999743
No 433
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=45.19 E-value=16 Score=37.05 Aligned_cols=51 Identities=31% Similarity=0.463 Sum_probs=42.4
Q ss_pred cccccccccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhcccc
Q psy9770 16 DDMLETENESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKN 66 (811)
Q Consensus 16 ~~~~~~~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~ 66 (811)
|.....-+.+|+.|+.+|.++|-.|=-.|.+||+-|.|.+-.+..||.--.
T Consensus 108 dn~~~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~Id 158 (390)
T 1deq_A 108 DNTFKQINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDID 158 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444567899999999999999988999999999999988888886553
No 434
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=44.39 E-value=13 Score=27.59 Aligned_cols=30 Identities=17% Similarity=0.370 Sum_probs=25.3
Q ss_pred hcchhHHHHHHHHHHHHHHHHhhhcccccc
Q psy9770 39 EHGDEIVCLRSTLADVLRRLAQLESSKNIA 68 (811)
Q Consensus 39 ~~~~e~~~l~~~~a~~~rr~~~~e~~~~~~ 68 (811)
.-++|..+||..++++..|.++||..-...
T Consensus 12 AVREEVevLKe~I~EL~e~~~qLE~EN~~L 41 (78)
T 1dip_A 12 AVREEVEILKEQIRELVEKNSQLERENTLL 41 (78)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999999999999999999765543
No 435
>1zw0_A Type III secretion protein; chaperone, translocation, export; 1.80A {Yersinia pestis} PDB: 2p58_A
Probab=43.77 E-value=27 Score=25.32 Aligned_cols=29 Identities=17% Similarity=0.308 Sum_probs=20.7
Q ss_pred HHHHHHHHhcc--hhH-HHHHHHHHHHHHHHH
Q psy9770 31 SDLEKKVLEHG--DEI-VCLRSTLADVLRRLA 59 (811)
Q Consensus 31 ~~le~~~~~~~--~e~-~~l~~~~a~~~rr~~ 59 (811)
..||+|++-++ .|| .-|+.||+||=|+|.
T Consensus 2 TnLE~~L~~~d~~~~i~~~l~qAl~~vKRqL~ 33 (66)
T 1zw0_A 2 TQLEEQLHNVETVRSITMQLEMALTKLKKDMM 33 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788877644 333 457889999999985
No 436
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=42.79 E-value=20 Score=31.26 Aligned_cols=45 Identities=16% Similarity=0.200 Sum_probs=31.6
Q ss_pred ccccccchhhhHHHHH-------HHHHhcchhHHHHHHHHHHHHHHHHhhhc
Q psy9770 19 LETENESLRERVSDLE-------KKVLEHGDEIVCLRSTLADVLRRLAQLES 63 (811)
Q Consensus 19 ~~~~~~~~~~r~~~le-------~~~~~~~~e~~~l~~~~a~~~rr~~~~e~ 63 (811)
+..+-..+..||.+|| +-++.+-||++.|+..+.-+--++..+|.
T Consensus 73 L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~ 124 (152)
T 3a7p_A 73 LQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKK 124 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566777888887 55667778888888877766666666655
No 437
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=41.42 E-value=39 Score=26.53 Aligned_cols=37 Identities=16% Similarity=0.297 Sum_probs=22.3
Q ss_pred ccccchhhhHHHHHHHHHhc-----------chhHHHHHHHHHHHHHH
Q psy9770 21 TENESLRERVSDLEKKVLEH-----------GDEIVCLRSTLADVLRR 57 (811)
Q Consensus 21 ~~~~~~~~r~~~le~~~~~~-----------~~e~~~l~~~~a~~~rr 57 (811)
+-+..|..+++++|.|...| |.||.-+|+-++..++-
T Consensus 10 ~q~~~Le~~l~e~E~~~~~~l~~~q~~i~~lE~el~~~r~e~~~ql~E 57 (86)
T 1x8y_A 10 CQLAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDE 57 (86)
T ss_dssp --CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556888888888887765 44445555555544444
No 438
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=41.29 E-value=35 Score=26.56 Aligned_cols=42 Identities=24% Similarity=0.411 Sum_probs=22.6
Q ss_pred chhhhHHHHHHH--------------HHhcchhHHHHHHHHHHHHHHHHhhhcccc
Q psy9770 25 SLRERVSDLEKK--------------VLEHGDEIVCLRSTLADVLRRLAQLESSKN 66 (811)
Q Consensus 25 ~~~~r~~~le~~--------------~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~ 66 (811)
++.+||+.||+. +++...||.-||-.+=+.-..|+.+.+++.
T Consensus 3 s~e~rv~~LEr~~~~~~q~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQr 58 (83)
T 2xdj_A 3 SVEDRVTQLERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQK 58 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 356677776653 223345665566555555555555544443
No 439
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=40.62 E-value=8 Score=38.93 Aligned_cols=41 Identities=17% Similarity=0.301 Sum_probs=24.3
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhcccc
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKN 66 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~ 66 (811)
+.|+|..||.+|+.++.+|..|+.-|...-.+|..|++...
T Consensus 2 ~~~~~~~lE~~Il~~~~~i~~L~~~l~~~~~ki~~L~~~i~ 42 (319)
T 1fzc_C 2 MLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVA 42 (319)
T ss_dssp --------CTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677778888888788887777777777777777765543
No 440
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=40.42 E-value=3.2e+02 Score=28.00 Aligned_cols=229 Identities=10% Similarity=-0.034 Sum_probs=117.8
Q ss_pred CCCc-EEEEcCCCcEEEEecCC-------ceEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeC---CCCCc--
Q psy9770 459 QGGE-VLSGDSNGNIIVWTRGS-------NTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDS---NLQPT-- 525 (811)
Q Consensus 459 ~~g~-llsg~~dg~I~vwd~~~-------~~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~---~~~~~-- 525 (811)
++.. +++.+.+|.|+--.+.. ++-...+.......+..+........|+..+..|.++.+.. .....
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a 84 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNA 84 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCccc
Confidence 4444 56888899988764422 11112222124556666665555565665777887766543 21110
Q ss_pred -c----ceeeeccccCCeEEEe-e---CCCCeEEEEeCCCeEEEEEccCC------ceeeee-ecccceEEEEECCCCCe
Q psy9770 526 -G----YEAQIAEHLGGIRTVS-E---GRGSQLIVGTTRNCILVGSLNLG------FSPVVL-GHTDELWALAAHPSLSQ 589 (811)
Q Consensus 526 -~----~~~~~~~~~~~v~~l~-~---~~~~~l~~~~~~~~i~~~d~~~~------~~~~~~-~h~~~v~~l~~sp~~~~ 589 (811)
. ....+.. ...|..+. . .++..++.++..|.++...+..- -...+. .-.+.+..+........
T Consensus 85 ~G~~i~~ll~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~ 163 (370)
T 3l6v_A 85 RGRPIINWIPLES-GERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRD 163 (370)
T ss_dssp CCEEGGGSCCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCE
T ss_pred CCcCHhhccCCCC-CCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCce
Confidence 0 0111222 23344443 2 34568999999999998875431 111111 12345555555555567
Q ss_pred EEEEECCCeEEEEeCCCCc---------EEEEecCCCCeEEEEEcC----------------------------------
Q psy9770 590 FLTAGFDRIVQLWDSMSHS---------VVWSKDIAEQAQSATFSP---------------------------------- 626 (811)
Q Consensus 590 l~s~s~dg~v~iwd~~~~~---------~~~~~~~~~~v~~~~~sp---------------------------------- 626 (811)
++..+.+|.+..++...-. ....+.....|.++...+
T Consensus 164 i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~ 243 (370)
T 3l6v_A 164 VLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADN 243 (370)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC--------------------------------
T ss_pred EEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccccc
Confidence 8888888888777653211 111122234555555443
Q ss_pred -CCCEEEEEEeCCeEEEEecCCcce-------eEE--ecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEec
Q psy9770 627 -DGSIIIVGCIAGRWLVMDSETREA-------YSI--HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVS 688 (811)
Q Consensus 627 -dg~~la~g~~dg~i~i~d~~~~~~-------~~~--~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~ 688 (811)
++..|++.+..|..+...+..... +.. +....+.+..+.+..+...|+..+..|.+.-..+.
T Consensus 244 ~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 244 GDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp ---CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGG
T ss_pred cCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHh
Confidence 456788888999888887653221 111 12222344443333333444444555655555544
No 441
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=40.22 E-value=23 Score=21.88 Aligned_cols=25 Identities=8% Similarity=0.247 Sum_probs=12.9
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRST 50 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~ 50 (811)
|.|+|.+|=++=...++|+.-||+-
T Consensus 6 LEdKvEeLl~~~~~L~~EV~RLk~l 30 (34)
T 2bni_A 6 IEDKLEEILSKGHHICNELARIKKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHH
Confidence 4455555555555555555555543
No 442
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=39.34 E-value=44 Score=24.39 Aligned_cols=33 Identities=9% Similarity=0.097 Sum_probs=22.5
Q ss_pred hhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHh
Q psy9770 28 ERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQ 60 (811)
Q Consensus 28 ~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~ 60 (811)
+|..+||++++..+.|-.-|++-++.+=+.+..
T Consensus 23 ~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~ 55 (63)
T 1ci6_A 23 AEQEALTGECKELEKKNEALKERADSLAKEIQY 55 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457777777777777777777776665444443
No 443
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=38.74 E-value=44 Score=24.36 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=20.5
Q ss_pred hhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhh
Q psy9770 28 ERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQL 61 (811)
Q Consensus 28 ~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~ 61 (811)
+++.+||.+|...+.|-.-|++.++.+-..+..+
T Consensus 23 ~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~L 56 (63)
T 2wt7_A 23 ELTDTLQAETDQLEDEKSALQTEIANLLKEKEKL 56 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777776666666665544434333
No 444
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=37.99 E-value=39 Score=29.69 Aligned_cols=45 Identities=11% Similarity=0.156 Sum_probs=34.0
Q ss_pred ccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhccccc
Q psy9770 23 NESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKNI 67 (811)
Q Consensus 23 ~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~~ 67 (811)
.....++...|+.+.++.+.+|.-|+..++.+-..|+.+|+....
T Consensus 90 ~~~~~~~~~~l~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~~ 134 (148)
T 3gpv_A 90 DSTILHRLKLMKQQEANVLQLIQDTEKNLKKIQQKIAKYEDEISS 134 (148)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 345788899999999999999999999998888888888876654
No 445
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=37.94 E-value=25 Score=31.74 Aligned_cols=36 Identities=28% Similarity=0.352 Sum_probs=31.0
Q ss_pred ccccccchhhhHHHHHHHHHhcchhHHHHHHHHHHH
Q psy9770 19 LETENESLRERVSDLEKKVLEHGDEIVCLRSTLADV 54 (811)
Q Consensus 19 ~~~~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~ 54 (811)
+.+...++.+||..|..++.+.+.||.-||..+|..
T Consensus 23 Lk~~~~~l~~~v~~l~~e~k~l~ke~~~l~~~~a~~ 58 (171)
T 2zvf_A 23 LRVEPAKLPKTVERFFEEWKDQRKEIERLKSVIADL 58 (171)
T ss_dssp TTCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334446899999999999999999999999998875
No 446
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=37.84 E-value=29 Score=26.85 Aligned_cols=47 Identities=15% Similarity=0.196 Sum_probs=38.8
Q ss_pred cccccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhcccc
Q psy9770 20 ETENESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKN 66 (811)
Q Consensus 20 ~~~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~ 66 (811)
..+-....+|+..+|.++..-+....-+-.-++.+=||+..+|+..-
T Consensus 12 k~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld 58 (81)
T 1ic2_A 12 KLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELD 58 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 34455678999999999998888888888888999999999987654
No 447
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=37.53 E-value=14 Score=28.95 Aligned_cols=25 Identities=32% Similarity=0.407 Sum_probs=18.9
Q ss_pred ccccchhhhHHHHHHHHHhcchhHH
Q psy9770 21 TENESLRERVSDLEKKVLEHGDEIV 45 (811)
Q Consensus 21 ~~~~~~~~r~~~le~~~~~~~~e~~ 45 (811)
++.-.||-+|-|||.|+.+.+.||.
T Consensus 58 TSViRLQKKImdLE~~~~~l~~el~ 82 (88)
T 1uuj_A 58 TSVIRLQKKVMELESKLNEAKEEFT 82 (88)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556789999999999999999885
No 448
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=37.42 E-value=13 Score=27.72 Aligned_cols=23 Identities=9% Similarity=0.098 Sum_probs=17.7
Q ss_pred ccchhhhHHHHHHHHHhcchhHH
Q psy9770 23 NESLRERVSDLEKKVLEHGDEIV 45 (811)
Q Consensus 23 ~~~~~~r~~~le~~~~~~~~e~~ 45 (811)
...|.+||..||++|...+..|+
T Consensus 46 ~~~L~~ri~~Le~~l~~l~~~l~ 68 (70)
T 1zme_C 46 LQQLQKDLNDKTEENNRLKALLL 68 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 35688888888888888777653
No 449
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=36.30 E-value=38 Score=29.55 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=37.7
Q ss_pred cchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhccccc
Q psy9770 24 ESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKNI 67 (811)
Q Consensus 24 ~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~~ 67 (811)
..+.+|...|+.+.++.+.+|.-|+.+++.+-..++.+|+....
T Consensus 77 ~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~~ 120 (142)
T 3gp4_A 77 HTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIP 120 (142)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778899999999999999999999999888889888876653
No 450
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=36.30 E-value=29 Score=26.67 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=20.5
Q ss_pred cccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Q psy9770 22 ENESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLA 59 (811)
Q Consensus 22 ~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~ 59 (811)
||..|.++|..++-.+...+.|..-|| .||+..+.|+
T Consensus 39 EN~~Lh~~ie~~~eEi~~Lk~en~~L~-elA~~~q~la 75 (83)
T 1wlq_A 39 ENEKLHKEIEQKDSEIARLRKENKDLA-EVAEHVQYMA 75 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 556666666666655555555555555 3444444443
No 451
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=36.27 E-value=44 Score=24.92 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=32.3
Q ss_pred cchhhhHHHHHHHHHhcchhHHHHHHHHHH-------HHHHHHhhhccccc
Q psy9770 24 ESLRERVSDLEKKVLEHGDEIVCLRSTLAD-------VLRRLAQLESSKNI 67 (811)
Q Consensus 24 ~~~~~r~~~le~~~~~~~~e~~~l~~~~a~-------~~rr~~~~e~~~~~ 67 (811)
..+..|+.-|+-|=-+-..||.-+..-+|. ||.||+.+|+.+..
T Consensus 3 ~~~~~~Leml~IrKnma~sEI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~ 53 (72)
T 2xu6_A 3 QTLVNSLEFLNIQKNSTMSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLM 53 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 356778888888877777777666655554 68888888877654
No 452
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=36.08 E-value=45 Score=23.38 Aligned_cols=25 Identities=12% Similarity=0.226 Sum_probs=12.7
Q ss_pred ccccccccccchhhhHHHHHHHHHh
Q psy9770 15 HDDMLETENESLRERVSDLEKKVLE 39 (811)
Q Consensus 15 ~~~~~~~~~~~~~~r~~~le~~~~~ 39 (811)
+-+.+-.|+.+|+.|+.+|..++++
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~e 44 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKK 44 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555555554444
No 453
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=35.60 E-value=11 Score=29.36 Aligned_cols=30 Identities=20% Similarity=0.169 Sum_probs=23.5
Q ss_pred ccchhhhHHHHHHHHHhcchhHHHHHHHHH
Q psy9770 23 NESLRERVSDLEKKVLEHGDEIVCLRSTLA 52 (811)
Q Consensus 23 ~~~~~~r~~~le~~~~~~~~e~~~l~~~~a 52 (811)
-..++.||+.||.+..+.+.||.-+++-|+
T Consensus 3 ~~~L~~~i~~L~~q~~~L~~ei~~~~a~L~ 32 (85)
T 3viq_B 3 KSQLESRVHLLEQQKEQLESSLQDALAKLK 32 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 346788888998888888888888876443
No 454
>3bj4_A Potassium voltage-gated channel subfamily KQT member 1; coiled coil, alternative splicing, deafness, disease mutation, glycoprotein, ION transport; 2.00A {Homo sapiens}
Probab=35.51 E-value=66 Score=22.00 Aligned_cols=35 Identities=17% Similarity=0.358 Sum_probs=26.1
Q ss_pred cccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHH
Q psy9770 22 ENESLRERVSDLEKKVLEHGDEIVCLRSTLADVLR 56 (811)
Q Consensus 22 ~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~r 56 (811)
+...+..||.-+|++|+.-|.-|..|=..+--+|+
T Consensus 11 ~~~S~~~Rl~rVE~qV~~md~KLd~l~~~~~~~l~ 45 (49)
T 3bj4_A 11 GSNTIGARLNRVEDKVTQLDQRLALITDMLHQLLS 45 (49)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55668899999999999999888766554444444
No 455
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=35.12 E-value=5.4e+02 Score=29.11 Aligned_cols=119 Identities=8% Similarity=-0.021 Sum_probs=57.5
Q ss_pred ceEEEEECCCCCeEEEEECCCe-EEEEeCCCCcEEEEecCCCCeEEEEEcCC--CCEEEEEEeCCe---EEEEecCCcce
Q psy9770 577 ELWALAAHPSLSQFLTAGFDRI-VQLWDSMSHSVVWSKDIAEQAQSATFSPD--GSIIIVGCIAGR---WLVMDSETREA 650 (811)
Q Consensus 577 ~v~~l~~sp~~~~l~s~s~dg~-v~iwd~~~~~~~~~~~~~~~v~~~~~spd--g~~la~g~~dg~---i~i~d~~~~~~ 650 (811)
.+..+...|.+..|+++-.|.. ++--|+.................+++..+ ...+++|..++. ..++....++.
T Consensus 434 ~~~~~~~~p~~~~l~~~~~d~g~~~~~d~~~~~~~~~~~~~~~~~~i~~ag~~~~~~v~vG~~dg~~~~~i~~S~DgG~t 513 (737)
T 2cn3_A 434 AVLDLVSPPEGAPLVSAVGDLVGFVHDDLKVGPKKMHVPSYSSGTGIDYAELVPNFMALVAKADLYDVKKISFSYDGGRN 513 (737)
T ss_dssp BEEEEECCSSSCSEEEEETTTBCCEESSTTSCCSSCSCTTCSEEEEEEEETTEEEEEEEEEECSSCCCCSEEEESSTTSS
T ss_pred eeeeEEcCCCCCeeEEEEeccCCeEEcccccCCccccCCccccccceeecccCCCeEEEEECcCCCCCceEEEeCCCCCC
Confidence 4556677787777877766543 33223332111100122234567777655 346667777664 23344443433
Q ss_pred eEEe---cCCCCCeEEEEEccCCC-EEEEEecCCcEEEEEecCCCcceeEEE
Q psy9770 651 YSIH---TDGNEPIQVVKFSPDGK-LLALGSRDNYIYVYEVSGDSRKYSRVG 698 (811)
Q Consensus 651 ~~~~---~~~~~~i~~i~~spdg~-~lasgs~dg~I~iwd~~~~~~~~~~~~ 698 (811)
-..+ .........+++++++. .+.+++.++ | |...+++..++.+.
T Consensus 514 W~~~~~~p~~~~~~~~i~~~~~~~~~~~a~~~~~-v--~~S~D~G~tW~~~~ 562 (737)
T 2cn3_A 514 WFQPPNEAPNSVGGGSVAVAADAKSVIWTPENAS-P--AVTTDNGNSWKVCT 562 (737)
T ss_dssp CBCCSCCCSCSSCCSEEEECTTSSCEEEECTTSC-C--EEESSTTSSCEECB
T ss_pred CcccccCCccccCCceEEEEeCCCCEEEEeCCCe-E--EEECCCCCCCccCC
Confidence 2221 11111123467777654 555554443 3 33444555666543
No 456
>2ovc_A Potassium voltage-gated channel subfamily KQT MEM; potassium channel, ION channel assemb coiled-coil, tetramer, transport protein; 2.07A {Homo sapiens}
Probab=35.07 E-value=26 Score=21.81 Aligned_cols=26 Identities=27% Similarity=0.311 Sum_probs=20.0
Q ss_pred cccchhhhHHHHHHHHHhcchhHHHH
Q psy9770 22 ENESLRERVSDLEKKVLEHGDEIVCL 47 (811)
Q Consensus 22 ~~~~~~~r~~~le~~~~~~~~e~~~l 47 (811)
+...+..||--+|++|+.-+.-|..|
T Consensus 4 ~~~Sm~~Rl~kVE~qv~~md~KLd~l 29 (33)
T 2ovc_A 4 DEISMMGRVVKVEKQVQSIEHKLDLL 29 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 44557889999999999887766544
No 457
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=34.46 E-value=1.9e+02 Score=23.56 Aligned_cols=45 Identities=20% Similarity=0.418 Sum_probs=21.9
Q ss_pred EEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEE
Q psy9770 621 SATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLAL 675 (811)
Q Consensus 621 ~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~las 675 (811)
.+.+..+|.+++.. .++. .+|... .........+.+.++|.+++.
T Consensus 54 ~l~l~~dGNLVl~~-~~~~-~~W~S~--------t~~~~g~~~l~l~~dGnlvl~ 98 (110)
T 3a0c_A 54 RLTLHNNGNLVIYD-QSNR-VIWQTK--------TNGKEDHYVLVLQQDRNVVIY 98 (110)
T ss_dssp EEEECTTSCEEEEC-TTCC-EEEECC--------CCCSSSCCEEEECTTSCEEEE
T ss_pred EEEEeCCCCEEEEC-CCCc-EEEecC--------CCCCCCCEEEEEeCCccEEEE
Confidence 45666666655542 2232 355433 112222335666777775553
No 458
>1sb0_B Protein C-MYB; CREB-binding protein, transcriptional activation, constitutive activation, LXXLL motif, KIX; NMR {Mus musculus} PDB: 2agh_A
Probab=34.44 E-value=26 Score=19.79 Aligned_cols=18 Identities=22% Similarity=0.479 Sum_probs=10.9
Q ss_pred hhHHHHHHHHHhcchhHH
Q psy9770 28 ERVSDLEKKVLEHGDEIV 45 (811)
Q Consensus 28 ~r~~~le~~~~~~~~e~~ 45 (811)
.||-+||.-+-.-|+|+.
T Consensus 3 kriKElELLLMS~E~Ev~ 20 (26)
T 1sb0_B 3 KRIKELELLLMSTENELK 20 (26)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhHHHHc
Confidence 466666666666666653
No 459
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=33.80 E-value=35 Score=26.17 Aligned_cols=45 Identities=22% Similarity=0.160 Sum_probs=24.0
Q ss_pred ccccccchhhhHHHHHHHHHh-------cchhHHHHHHHHHHHHHHHHhhhc
Q psy9770 19 LETENESLRERVSDLEKKVLE-------HGDEIVCLRSTLADVLRRLAQLES 63 (811)
Q Consensus 19 ~~~~~~~~~~r~~~le~~~~~-------~~~e~~~l~~~~a~~~rr~~~~e~ 63 (811)
++.-=.+|.-||+.+|.-+.+ |..+|..|+..|+-+..||...+.
T Consensus 12 le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~~ 63 (78)
T 3efg_A 12 LEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVRS 63 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333445588888877776655 555555555555555555554443
No 460
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=33.78 E-value=34 Score=31.10 Aligned_cols=38 Identities=24% Similarity=0.379 Sum_probs=28.4
Q ss_pred cccchhhhHHHHHHHHHhcchhHHHHHH------HHHHHHHHHH
Q psy9770 22 ENESLRERVSDLEKKVLEHGDEIVCLRS------TLADVLRRLA 59 (811)
Q Consensus 22 ~~~~~~~r~~~le~~~~~~~~e~~~l~~------~~a~~~rr~~ 59 (811)
||..|.++|..|+-.+...+.|+.-||. .||+||.||-
T Consensus 116 EN~~Lh~~ie~l~eEi~~LkeEn~eLkeLae~~q~la~vi~~l~ 159 (209)
T 2wvr_A 116 ENEKLHKEIEQKDNEIARLKKENKELAEVAEHVQYMAELIERLN 159 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6778888888888888887778777775 3566666664
No 461
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=33.73 E-value=32 Score=27.70 Aligned_cols=45 Identities=22% Similarity=0.220 Sum_probs=28.1
Q ss_pred ccccccchhhhHHHHHHHHHh----------------------------cchhHHHHHHHHHHHHHHHHhhhc
Q psy9770 19 LETENESLRERVSDLEKKVLE----------------------------HGDEIVCLRSTLADVLRRLAQLES 63 (811)
Q Consensus 19 ~~~~~~~~~~r~~~le~~~~~----------------------------~~~e~~~l~~~~a~~~rr~~~~e~ 63 (811)
++.|+..|..|+..||-++-. .+.+|..|++-+..+-+|+..+|+
T Consensus 24 Le~E~~rLr~~~~~LE~~Le~~~l~Gd~~~~~TKVlH~~~NPa~~a~~~~~~~~e~Lq~E~erLr~~v~~lEe 96 (100)
T 1go4_E 24 LEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSLNPTSVARQRLREDHSQLQAECERLRGLLRAMER 96 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCCSCCCTTTEEEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCccCeeeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455677777777777766533 234556666666666666766666
No 462
>3hh0_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, 11183J, structural genomics; 2.67A {Bacillus cereus atcc 14579}
Probab=33.69 E-value=46 Score=29.14 Aligned_cols=47 Identities=4% Similarity=-0.058 Sum_probs=33.6
Q ss_pred ccccccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhccc
Q psy9770 19 LETENESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSK 65 (811)
Q Consensus 19 ~~~~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~ 65 (811)
+.....+..+|+..|+.+.+..+.+|.-|+..+..+=+.++.+++..
T Consensus 71 l~~~~~~~~~~~~~L~~q~~~L~~~i~~l~~~l~~l~~~i~~~~~~~ 117 (146)
T 3hh0_A 71 ILQRDIETEVFLRQMHFQREVLLAEQERIAKVLSHMDEMTKKFQKEE 117 (146)
T ss_dssp HTSSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 33344567889999999888888888888877766555566555543
No 463
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=33.49 E-value=51 Score=20.37 Aligned_cols=24 Identities=8% Similarity=0.392 Sum_probs=10.7
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRS 49 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~ 49 (811)
|.|.|.+|=.+-...+||+.-||.
T Consensus 6 ledKvEel~~~~~~l~nEv~Rl~~ 29 (34)
T 2r2v_A 6 VADKLEEVASKLYHNANELARVAK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 344444444444444444444443
No 464
>3pp5_A BRK1, protein brick1; triple coiled-coil, precursor of the SCAR-WAVE complex, ABI, structural protein; 1.50A {Dictyostelium discoideum}
Probab=33.49 E-value=37 Score=25.48 Aligned_cols=28 Identities=29% Similarity=0.405 Sum_probs=21.8
Q ss_pred chhhhHHHHHHHHHhcchhHHHHHHHHH
Q psy9770 25 SLRERVSDLEKKVLEHGDEIVCLRSTLA 52 (811)
Q Consensus 25 ~~~~r~~~le~~~~~~~~e~~~l~~~~a 52 (811)
.-..|++.|++|+|.-|-=|..|-+.|+
T Consensus 42 sce~KLa~ln~kL~~lE~~L~iLEAkls 69 (73)
T 3pp5_A 42 STRNKLSDLNEKLTILDRQVDYLEATFK 69 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3578999999999998877777766655
No 465
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=33.33 E-value=41 Score=24.34 Aligned_cols=31 Identities=26% Similarity=0.364 Sum_probs=19.8
Q ss_pred cchhhhHHHHHHHHHhcchhHHHHHHHHHHH
Q psy9770 24 ESLRERVSDLEKKVLEHGDEIVCLRSTLADV 54 (811)
Q Consensus 24 ~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~ 54 (811)
..|.+++..||..-.....||..|+.-++.+
T Consensus 25 ~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~L 55 (61)
T 1t2k_D 25 QSLEKKAEDLSSLNGQLQSEVTLLRNEVAQL 55 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466667777666666666666666665543
No 466
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=33.27 E-value=44 Score=28.67 Aligned_cols=39 Identities=13% Similarity=0.334 Sum_probs=32.6
Q ss_pred chhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhc
Q psy9770 25 SLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLES 63 (811)
Q Consensus 25 ~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~ 63 (811)
-+.+|+..||.++...+.+|.-+|..+..+...|+.+-.
T Consensus 92 ~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~~~~ 130 (133)
T 1fxk_C 92 SIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEELLA 130 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 478899999999999999999999888888888876543
No 467
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=32.03 E-value=30 Score=27.34 Aligned_cols=39 Identities=18% Similarity=0.286 Sum_probs=23.8
Q ss_pred hhhHHHHHHHHHhcchhHHHHHHHHH-------------HHHHHHHhhhccc
Q psy9770 27 RERVSDLEKKVLEHGDEIVCLRSTLA-------------DVLRRLAQLESSK 65 (811)
Q Consensus 27 ~~r~~~le~~~~~~~~e~~~l~~~~a-------------~~~rr~~~~e~~~ 65 (811)
+-.+..||.++...|.+|.-|.+.|| +++.+|+.+|...
T Consensus 21 qrEle~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eL 72 (89)
T 2lw1_A 21 QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQEL 72 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 44566666666666666666666654 4566666665543
No 468
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=31.83 E-value=57 Score=26.05 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=36.5
Q ss_pred cccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhcccc
Q psy9770 22 ENESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKN 66 (811)
Q Consensus 22 ~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~ 66 (811)
+-..+++++..||.++..-+.|+.-|+..|++--++=...|....
T Consensus 6 ~~e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~ 50 (97)
T 2eqb_B 6 NYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEAD 50 (97)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445689999999999999999999999999987666555555443
No 469
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=31.55 E-value=40 Score=25.84 Aligned_cols=36 Identities=22% Similarity=0.386 Sum_probs=27.6
Q ss_pred cccccchhhhHHHHHHHHHhcchhHHHHHHHHHHHH
Q psy9770 20 ETENESLRERVSDLEKKVLEHGDEIVCLRSTLADVL 55 (811)
Q Consensus 20 ~~~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~ 55 (811)
.++...+..|+-+||.|=+..|+-|.-|+-.|.|.-
T Consensus 5 ~~e~e~~~~klq~~E~rN~~Le~~v~~le~~Le~s~ 40 (79)
T 3cvf_A 5 AAEREETQQKVQDLETRNAELEHQLRAMERSLEEAR 40 (79)
T ss_dssp -----CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999999999988888876
No 470
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=31.12 E-value=5.5e+02 Score=28.00 Aligned_cols=213 Identities=8% Similarity=0.007 Sum_probs=0.0
Q ss_pred ecCCCCccceEEccCCcEEEEeccEEEEEeCCCCceEEeccCCCC---eEEEEEcCCCcEEEEeec--------------
Q psy9770 257 YRGKDCRSNLYLLPTGEIVYFVAAVAVLYNVEEQTQRHYLGHTDD---IKCLSIHPNKLLIATGQV-------------- 319 (811)
Q Consensus 257 ~~~~~~~~~l~~spdg~~l~~~~~~i~i~d~~~~~~~~~~~h~~~---V~~la~spdg~~Lasg~~-------------- 319 (811)
|++.+......-.++|.+++..+..+..+|...+....+.-.... -..+...|+|++|+.+..
T Consensus 203 ~~~~g~l~~~~g~~nG~l~~g~G~~i~elD~~Gkvv~~~~lp~g~~~~HHD~~~l~nGn~Lv~v~~~d~~~~dG~~~~~v 282 (571)
T 3elq_A 203 INKRGYLMGIRETPRGTFTAVQGQHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKSNYRRDDGVHVTTI 282 (571)
T ss_dssp GGGCSCCEEEEECTTSCEEEEEBTEEEEECTTCCEEEEEECCTTEECBCSCEEECTTSCEEEEEEETTEECTTSCEECCC
T ss_pred ccCCCeEEEEEecCCCCEEEecCcEEEEECCCCcEEEEEECCCCccccccceEEcCCCcEEEEEecccccCCCCccccee
Q ss_pred cCCCCCCCCCeEEEEeCCCCcEEEEeccCCcccc----------------------------------------------
Q psy9770 320 AGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERS---------------------------------------------- 353 (811)
Q Consensus 320 dg~~~~~~~~~I~iWd~~t~~~~~~l~~~~h~~~---------------------------------------------- 353 (811)
+. .|...| .+|+.+..+.+..|-..
T Consensus 283 dD--------~I~EVD-~tGeVv~eW~~~dhld~~~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~g~~~g~~~~~D 353 (571)
T 3elq_A 283 RD--------HILEVD-KSGRVVDVWDLTKILDPKRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPFGDALGVGPGRN 353 (571)
T ss_dssp SC--------EEEEEC-TTSCEEEEEEHHHHSCTTCCTTGGGSBTTC-------CCCSCBCCCCTTCCSSSSSCSSTTSC
T ss_pred cc--------EEEEEC-CCCCEEEEEEhHHccCcccccchhccccccccccccccccccccccccccccccccccCCCCC
Q ss_pred ---EEEEEEecCCCCcEEEEEeCCCCceEEEEEcccCCCcceEEEeeeCCC-----------------------------
Q psy9770 354 ---ISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVD----------------------------- 401 (811)
Q Consensus 354 ---V~~l~fs~~~dg~~Lasv~~s~d~~i~vWd~~~~~~~~~~~~~~~~~~----------------------------- 401 (811)
|.++.+.+ .++.+|++ +-.- .|...|- +++ .+..+-++.+
T Consensus 354 w~HiNsv~~d~-~dd~~liS--sR~~-~I~~Id~-tG~---V~W~LGg~~~w~~d~~~~~l~Pvd~~G~~~~~~~~~~~~ 425 (571)
T 3elq_A 354 WAHVNSIAYDA-KDDSIILS--SRHQ-GVVKIGR-DKQ---VKWILAPSKGWEKPLASKLLKPVDANGKPITCNENGLCE 425 (571)
T ss_dssp SCCEEEEEEET-TTTEEEEE--ETTT-EEEEEET-TSC---EEEEESCSTTCCTTGGGGBCEEBCTTSCBCCBCTTSCBS
T ss_pred CcEecceeEcC-CCCEEEEE--CCcc-EEEEEcC-CCc---EEEEECCCCCCchhhhhhccccccccCcccccccccccc
Q ss_pred --------cEEEEEecCCCCCeEEEECCCc--------------EEEEEEcCC----ceeeeecccccccCCCCceEEEE
Q psy9770 402 --------TVVAAEFHPLDRNNIVTCGKSH--------------INFWTIDAG----GTLYKKQGIFEMIRDKPKYVTCL 455 (811)
Q Consensus 402 --------~V~~v~fsp~~~~ll~~~~d~~--------------i~iwd~~~~----~~~~~~~~~~~~l~~~~~~v~~l 455 (811)
.-.++.+.+++..++.=-+... +..+.++.. +.+......... .-....+.++
T Consensus 426 ~~~F~~~~gQH~a~~~~~g~i~vFDNg~~~~~~~p~~~~~~~SR~l~y~ID~~~~Tv~~vw~y~~~~g~-~~yS~~~gs~ 504 (571)
T 3elq_A 426 NSDFDFTYTQHTAWISSKGTLTIFDNGDGRHLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERGY-DFYSPITSII 504 (571)
T ss_dssp SSSCCCCSSCEEEEECTTSCEEEEECCTTGGGSCCSSGGGCCCEEEEEEEETTTTEEEEEEEECGGGGG-GGCCSSCCEE
T ss_pred cCCCccccCCcCeEEcCCCeEEEEeCCCCCCCCcccCCCCCCceEEEEEEcCCCCEEEEEEEecCCCCC-Cccccccccc
Q ss_pred EEcCCCc-EEEEcC-----------CCcEEEEecCCceEEEEee
Q psy9770 456 AFTQGGE-VLSGDS-----------NGNIIVWTRGSNTISKFIR 487 (811)
Q Consensus 456 ~~s~~g~-llsg~~-----------dg~I~vwd~~~~~~~~~~~ 487 (811)
...|+|. +++-+. .+.|.-++..+.+.+..+.
T Consensus 505 Q~L~nGN~li~~g~~~~~~~~g~~~~~~i~E~~~~~~evv~e~~ 548 (571)
T 3elq_A 505 EYQADRNTMFGFGGSIHLFDVGQPTVGKLNEIDYKTKEVKVEID 548 (571)
T ss_dssp EEETTTTEEEEEEEEETTTSTTSEEEEEEEEEETTTCCEEEEEE
T ss_pred EECCCCCEEEEecccccccccCCCCceeEEEECCCCCEEEEEEE
No 471
>3ph0_A ASCE; type III secretion system, chapero; 2.40A {Aeromonas hydrophila} PDB: 2q1k_A
Probab=31.11 E-value=37 Score=24.87 Aligned_cols=29 Identities=34% Similarity=0.479 Sum_probs=21.3
Q ss_pred HHHHHHHHhcc----hhH-HHHHHHHHHHHHHHH
Q psy9770 31 SDLEKKVLEHG----DEI-VCLRSTLADVLRRLA 59 (811)
Q Consensus 31 ~~le~~~~~~~----~e~-~~l~~~~a~~~rr~~ 59 (811)
..||+|++--+ .|| .-|+.||+||=|+|.
T Consensus 3 T~LE~~L~~~~~~~~~~i~~~L~qAl~~vKr~L~ 36 (67)
T 3ph0_A 3 TNLETRLSGADPVFARELHAQLVQALGDVKRRLL 36 (67)
T ss_dssp CHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred chHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46899987663 344 457888999989886
No 472
>2djv_A Methionyl-tRNA synthetase; EC 6.1.1.10, WHEP-TRS domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.10 E-value=57 Score=25.09 Aligned_cols=26 Identities=15% Similarity=0.316 Sum_probs=22.0
Q ss_pred chhhhHHHHHHHHHhcchhHHHHHHH
Q psy9770 25 SLRERVSDLEKKVLEHGDEIVCLRST 50 (811)
Q Consensus 25 ~~~~r~~~le~~~~~~~~e~~~l~~~ 50 (811)
....-+.+|+.+|.+|+|.+.-||+.
T Consensus 10 ~~~~~~~~l~~~V~~QG~~VR~LKa~ 35 (79)
T 2djv_A 10 AKPQQIQALMDEVTKQGNIVRELKAQ 35 (79)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34556889999999999999999963
No 473
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=31.01 E-value=32 Score=35.70 Aligned_cols=51 Identities=20% Similarity=0.348 Sum_probs=44.3
Q ss_pred cccccccchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhcccccc
Q psy9770 18 MLETENESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKNIA 68 (811)
Q Consensus 18 ~~~~~~~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~~~ 68 (811)
....-+.+|+.|+.+|.++|-.|=--|.+||+-|.|.+-.+..||.--.+.
T Consensus 108 ~~~e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skIQRLE~dI~~q 158 (491)
T 1m1j_A 108 NYGHVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDIDIK 158 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456689999999999999999999999999999999999999876654
No 474
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=30.96 E-value=17 Score=25.60 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=23.2
Q ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhh
Q psy9770 30 VSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLE 62 (811)
Q Consensus 30 ~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e 62 (811)
+.+|-+.+++...++..|+..+++.=+||++.|
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~~e 53 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKAKLAQYE 53 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 456666666666777777777777777887654
No 475
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=30.65 E-value=4.5e+02 Score=26.84 Aligned_cols=270 Identities=12% Similarity=0.063 Sum_probs=126.3
Q ss_pred CCCeEEEECCCcEEEEEEcCCceeee-------ecccccccCCCCceEEEEEEcCCCcEEEEcCCCcEEEEecCCc----
Q psy9770 412 DRNNIVTCGKSHINFWTIDAGGTLYK-------KQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSN---- 480 (811)
Q Consensus 412 ~~~ll~~~~d~~i~iwd~~~~~~~~~-------~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I~vwd~~~~---- 480 (811)
...+++..++|.|..|-.....++-. .......+. ...+..++... ...+.-..||.|+.|-....
T Consensus 10 ~~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~--~~~i~~i~~G~-~~~~~l~~~G~v~~wG~n~~GqLG 86 (389)
T 3kci_A 10 GRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGE-QTLFAVTADGKLYATGYGAGGRLG 86 (389)
T ss_dssp -----------CEEEEEECTTSTTSSCSCSEEEEEEECHHHH--HTCEEEEEEET-TEEEEEETTSCEEEEECCGGGTTS
T ss_pred cccceeECCCCeEEEeeCCCCccCCCCcCccccCCEeccccc--CCceEEEEeCC-CeEEEEcCCCcEEEEECCCCCCCC
Confidence 56667777889999998765433220 000000000 01234444322 22456678899999954321
Q ss_pred -------eEEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCCC-c--------cceeeeccc-cCCeEEEee
Q psy9770 481 -------TISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQP-T--------GYEAQIAEH-LGGIRTVSE 543 (811)
Q Consensus 481 -------~~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~~-~--------~~~~~~~~~-~~~v~~l~~ 543 (811)
.....+.......+..++++......+....||.|+.|-.+..- + .....+... ...|..++.
T Consensus 87 ~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~ 166 (389)
T 3kci_A 87 IGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 166 (389)
T ss_dssp SSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe
Confidence 11111221223345556666555566667889999999653211 1 011111111 124555554
Q ss_pred CCCCeEEEEeCCCeEEEEEccCC-----------cee-eee-ecccceEEEEECCCCCeEEEEECCCeEEEEeCCCC-c-
Q psy9770 544 GRGSQLIVGTTRNCILVGSLNLG-----------FSP-VVL-GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH-S- 608 (811)
Q Consensus 544 ~~~~~l~~~~~~~~i~~~d~~~~-----------~~~-~~~-~h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~-~- 608 (811)
.. ...++.+.++.|+.|=.... ... .+. .....|..++........+....||.|..|-.... +
T Consensus 167 G~-~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqL 245 (389)
T 3kci_A 167 GG-AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 245 (389)
T ss_dssp CS-SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTT
T ss_pred Cc-CeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCC
Confidence 43 34455677889999864321 000 111 11235666766543356666778999999964321 1
Q ss_pred --------EEEE-ec-C-CCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCcce-----------eEEec-CCCCCeEEEE
Q psy9770 609 --------VVWS-KD-I-AEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREA-----------YSIHT-DGNEPIQVVK 665 (811)
Q Consensus 609 --------~~~~-~~-~-~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~~~-----------~~~~~-~~~~~i~~i~ 665 (811)
.... .. . ...|..++... ...++-+.+|.|+.|-....-+ ...+. .....|..|+
T Consensus 246 G~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia 323 (389)
T 3kci_A 246 GRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 323 (389)
T ss_dssp SSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEE
T ss_pred CCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEE
Confidence 1111 11 1 12355555433 3444446788888886432110 11111 1123455555
Q ss_pred EccCCCEEEEEecCCcEEEEEecC
Q psy9770 666 FSPDGKLLALGSRDNYIYVYEVSG 689 (811)
Q Consensus 666 ~spdg~~lasgs~dg~I~iwd~~~ 689 (811)
.. ....++-..||.|+.|-...
T Consensus 324 ~G--~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 324 TG--SLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EC--SSEEEEEETTCCEEEEECCT
T ss_pred ec--cCeEEEECCCCCEEEeeCCC
Confidence 43 33444456888899887654
No 476
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=30.43 E-value=20 Score=28.13 Aligned_cols=19 Identities=42% Similarity=0.534 Sum_probs=17.4
Q ss_pred HHHHHHHHhcchhHHHHHH
Q psy9770 31 SDLEKKVLEHGDEIVCLRS 49 (811)
Q Consensus 31 ~~le~~~~~~~~e~~~l~~ 49 (811)
.+||.+|....+||..||.
T Consensus 66 ~dLE~kvesL~eEl~fLkk 84 (86)
T 3swk_A 66 LDLERKVESLQEEIAFLKK 84 (86)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 6899999999999999983
No 477
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=29.92 E-value=4.8e+02 Score=26.87 Aligned_cols=238 Identities=14% Similarity=0.055 Sum_probs=118.7
Q ss_pred cceEEEEEecCCcEEEEecCCCcEEEEeCCCC-Ccc--------ceeeecc-ccCCeEEEeeCCCCeEEEEeCCCeEEEE
Q psy9770 492 GSVFSICVLKEGSIISAGGKDGRLLQFDSNLQ-PTG--------YEAQIAE-HLGGIRTVSEGRGSQLIVGTTRNCILVG 561 (811)
Q Consensus 492 ~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~-~~~--------~~~~~~~-~~~~v~~l~~~~~~~l~~~~~~~~i~~~ 561 (811)
..|..|+... ...+.-..||.|+.|-.+.. ++. ....+.. ....|..++......++....++.++.|
T Consensus 16 ~~v~~ia~G~--~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~w 93 (406)
T 4d9s_A 16 RKVLIISAGA--SHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSW 93 (406)
T ss_dssp CCEEEEEECS--SEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEE
T ss_pred cceEEEecCC--CeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEE
Confidence 3455555433 23333456778888865321 110 1111111 1235666766655555555555689988
Q ss_pred EccCC-------c----ee-eeee-cccceEEEEECCCCCeEEEEECCCeEEEEeCCCC-c---------EEEE-ec-C-
Q psy9770 562 SLNLG-------F----SP-VVLG-HTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH-S---------VVWS-KD-I- 615 (811)
Q Consensus 562 d~~~~-------~----~~-~~~~-h~~~v~~l~~sp~~~~l~s~s~dg~v~iwd~~~~-~---------~~~~-~~-~- 615 (811)
-.... . .. .+.. ....|..++.. ....+....||.|..|-.... + .... .. .
T Consensus 94 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G--~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~ 171 (406)
T 4d9s_A 94 GWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFE 171 (406)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGT
T ss_pred cCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC--hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccC
Confidence 54321 0 00 0111 12256666664 345566678999999965431 1 1111 11 1
Q ss_pred CCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCc-c----------eeEEec-CCCCCeEEEEEccCCCEEEEEecCCcEE
Q psy9770 616 AEQAQSATFSPDGSIIIVGCIAGRWLVMDSETR-E----------AYSIHT-DGNEPIQVVKFSPDGKLLALGSRDNYIY 683 (811)
Q Consensus 616 ~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~-~----------~~~~~~-~~~~~i~~i~~spdg~~lasgs~dg~I~ 683 (811)
...|..++... ...++-+.+|.|+.|-.... + ....+. .....|..++.. ..+.++-..+|.|+
T Consensus 172 ~~~i~~va~G~--~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~v~ 247 (406)
T 4d9s_A 172 GIRIKMVAAGA--EHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGALY 247 (406)
T ss_dssp TCCEEEEEECS--SEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCCEE
T ss_pred CCcEEEEecCC--CeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCCEE
Confidence 22455555433 35555577888988854321 1 011111 122346555543 33455556889999
Q ss_pred EEEecCCCcc-------eeEEEEecC-CCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCccc
Q psy9770 684 VYEVSGDSRK-------YSRVGRCTG-HSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQI 739 (811)
Q Consensus 684 iwd~~~~~~~-------~~~~~~~~~-h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~ 739 (811)
.|-.....+. ......+.. ....|..++.. ..+.+....||.|+.|-....-++
T Consensus 248 ~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G--~~hs~alt~~G~v~~wG~n~~GqL 309 (406)
T 4d9s_A 248 TYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG--WRHTMALTSDGKLYGWGWNKFGQV 309 (406)
T ss_dssp EEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTT
T ss_pred EeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEec--CCEEEEEcCCCeEEEeeCCCCCCC
Confidence 9976543211 111111221 12346666653 334455568999999987654444
No 478
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=29.85 E-value=31 Score=28.30 Aligned_cols=24 Identities=25% Similarity=0.404 Sum_probs=19.5
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHH
Q psy9770 31 SDLEKKVLEHGDEIVCLRSTLADV 54 (811)
Q Consensus 31 ~~le~~~~~~~~e~~~l~~~~a~~ 54 (811)
.|||.+|..|+-||..|+.-.-|+
T Consensus 66 YDlE~kv~kq~yEI~eL~~rV~dl 89 (107)
T 1ytz_T 66 YDFAEQIKRKKYEIVTLRNRIDQA 89 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHhhhhHHHHHHHHHHHh
Confidence 678899999999999888765543
No 479
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=29.21 E-value=68 Score=25.61 Aligned_cols=39 Identities=15% Similarity=0.087 Sum_probs=33.3
Q ss_pred chhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhc
Q psy9770 25 SLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLES 63 (811)
Q Consensus 25 ~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~ 63 (811)
...++...|+++.++-+.+|.-|+..++.+-+.++.+++
T Consensus 36 ~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~~~~~~~ 74 (99)
T 1q08_A 36 TCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCG 74 (99)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 467889999999999999999999988888888877765
No 480
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=28.97 E-value=4.9e+02 Score=26.75 Aligned_cols=277 Identities=9% Similarity=0.044 Sum_probs=131.1
Q ss_pred CCcEEEEEecCCCCCeEEEECCCcEEEEEEcCCceee-------eecccccccCCCCceEEEEEEcCCCcEEEEcCCCcE
Q psy9770 400 VDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLY-------KKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNI 472 (811)
Q Consensus 400 ~~~V~~v~fsp~~~~ll~~~~d~~i~iwd~~~~~~~~-------~~~~~~~~l~~~~~~v~~l~~s~~g~llsg~~dg~I 472 (811)
...|..++.- ....++...++.|..|-.....++- .....+..+. ...|..++...+..++....++.|
T Consensus 15 ~~~v~~ia~G--~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~--~~~i~~va~G~~ht~al~~~gg~v 90 (406)
T 4d9s_A 15 PRKVLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALD--GHQIVSVTCGADHTVAYSQSGMEV 90 (406)
T ss_dssp CCCEEEEEEC--SSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGT--TSCEEEEEECSSEEEEEETTTTEE
T ss_pred ccceEEEecC--CCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccC--CCCEEEEEeCcceEEEEECCCCEE
Confidence 3455555554 3555666778888888654322211 0001111111 134666666544334444444699
Q ss_pred EEEecCCc-e----------EEEEeecccccceEEEEEecCCcEEEEecCCCcEEEEeCCCC-Ccc--------ceeeec
Q psy9770 473 IVWTRGSN-T----------ISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQ-PTG--------YEAQIA 532 (811)
Q Consensus 473 ~vwd~~~~-~----------~~~~~~~~h~~~V~~l~~s~dg~~l~s~s~dg~I~~wd~~~~-~~~--------~~~~~~ 532 (811)
+.|-.... + ....+.......|..|+... ...+....||.|+.|-.+.. ++. ....+.
T Consensus 91 ~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~--~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~ 168 (406)
T 4d9s_A 91 YSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD--SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 168 (406)
T ss_dssp EEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECS--SEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECG
T ss_pred EEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEECh--hheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEec
Confidence 99954321 1 11111112233577766543 33444678899999976432 110 011111
Q ss_pred cc-cCCeEEEeeCCCCeEEEEeCCCeEEEEEccCCc-----------e-eeeee-cccceEEEEECCCCCeEEEEECCCe
Q psy9770 533 EH-LGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGF-----------S-PVVLG-HTDELWALAAHPSLSQFLTAGFDRI 598 (811)
Q Consensus 533 ~~-~~~v~~l~~~~~~~l~~~~~~~~i~~~d~~~~~-----------~-~~~~~-h~~~v~~l~~sp~~~~l~s~s~dg~ 598 (811)
.. ...|..++.... ..++.+.++.++.|-....- . ..+.. ....|..++.. ....+....+|.
T Consensus 169 ~~~~~~i~~va~G~~-hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~ 245 (406)
T 4d9s_A 169 AFEGIRIKMVAAGAE-HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGA 245 (406)
T ss_dssp GGTTCCEEEEEECSS-EEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCC
T ss_pred ccCCCcEEEEecCCC-eEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCC
Confidence 11 124555554433 44555778899998643210 0 00111 11345555553 334555567889
Q ss_pred EEEEeCCCC-c---------EEEE-ec--CCCCeEEEEEcCCCCEEEEEEeCCeEEEEecCCc-c-----------eeEE
Q psy9770 599 VQLWDSMSH-S---------VVWS-KD--IAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETR-E-----------AYSI 653 (811)
Q Consensus 599 v~iwd~~~~-~---------~~~~-~~--~~~~v~~~~~spdg~~la~g~~dg~i~i~d~~~~-~-----------~~~~ 653 (811)
|..|-.... + .... .. ....|..++.- ....++-+.+|.|+.|=.... + +...
T Consensus 246 v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v 323 (406)
T 4d9s_A 246 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG--WRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQV 323 (406)
T ss_dssp EEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEE
T ss_pred EEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEec--CCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEE
Confidence 999864321 1 1111 11 12235555443 234445567888888854321 1 1111
Q ss_pred ecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecC
Q psy9770 654 HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSG 689 (811)
Q Consensus 654 ~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~ 689 (811)
.......|..|+.- ..+.++-..+|.|+.|=...
T Consensus 324 ~~~~~~~v~~va~G--~~hs~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 324 RFPDDQKVVQVSCG--WRHTLAVTERNNVFAWGRGT 357 (406)
T ss_dssp CCGGGCCEEEEEEC--SSEEEEEETTSCEEEEECCT
T ss_pred eccCCCcEEEEEeC--CCeEEEEeCCCCEEEecCCC
Confidence 11112345555442 33444445778888886544
No 481
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=28.34 E-value=4e+02 Score=25.51 Aligned_cols=152 Identities=7% Similarity=-0.013 Sum_probs=79.3
Q ss_pred EEEEEEeCCeEEEEecCCcce-eEEecCCCCCeEEEEEccCCCEEEEEecCCcEEEEEecC---CCcceeEE---EEecC
Q psy9770 630 IIIVGCIAGRWLVMDSETREA-YSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSG---DSRKYSRV---GRCTG 702 (811)
Q Consensus 630 ~la~g~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~i~~spdg~~lasgs~dg~I~iwd~~~---~~~~~~~~---~~~~~ 702 (811)
.+++.+.+|.|+--....... ...+... ..+..+........|+..+..|.++-+.+.. .......+ ..+.
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~- 81 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP- 81 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-
Confidence 455567777776655433211 1112333 3344444444445566667888877665533 11111111 1122
Q ss_pred CCCCeeEEEeCCCCCeEEEecCCceEEEEECCCCcccCCCCCccceeEeccceeeccceeeeCCCCCCCCccceEEec-C
Q psy9770 703 HSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERS-H 781 (811)
Q Consensus 703 h~~~V~~l~~spdg~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~h~~~I~~l~~s-~ 781 (811)
....|.++....++.+|+.++..|.++...+..-.....- ... +.... .+..+..+... .
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~-G~~-----------------~i~L~-~~d~lv~~~~~~~ 142 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRA-GKA-----------------LITLP-ENAHVMPPVVIED 142 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTT-CEE-----------------CBCCC-TTCCBCCCEECCC
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcC-ceE-----------------EEEEC-CCCEEEEEEEecC
Confidence 2346767654456677888999999999987543221110 000 00111 12345454444 3
Q ss_pred CCCEEEEEcCCCcEEEEeCCC
Q psy9770 782 DARVIATGDDFGKLKLYSYPA 802 (811)
Q Consensus 782 dg~~Las~~~dg~v~vw~~~~ 802 (811)
++..|+..+.+|.+..|....
T Consensus 143 ~~~~i~l~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 143 ASDMLLAITQAGRMLMFPVSD 163 (256)
T ss_dssp TTCEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEcCCCeEEEEEHHH
Confidence 455777788889888887654
No 482
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=28.15 E-value=55 Score=25.17 Aligned_cols=29 Identities=28% Similarity=0.320 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHhcchhHHHHHHHHHHHHH
Q psy9770 28 ERVSDLEKKVLEHGDEIVCLRSTLADVLR 56 (811)
Q Consensus 28 ~r~~~le~~~~~~~~e~~~l~~~~a~~~r 56 (811)
+-+..||.|||+-=|.|++|+.=+.+.=.
T Consensus 6 ElleqLE~KIq~avdtI~lLqmEieELKe 34 (81)
T 2jee_A 6 EVFEKLEAKVQQAIDTITLLQMEIEELKE 34 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999888776655433
No 483
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=27.86 E-value=35 Score=18.96 Aligned_cols=16 Identities=44% Similarity=0.571 Sum_probs=12.0
Q ss_pred ccchhhhHHHHHHHHH
Q psy9770 23 NESLRERVSDLEKKVL 38 (811)
Q Consensus 23 ~~~~~~r~~~le~~~~ 38 (811)
-.||++|+..|.+++.
T Consensus 10 ledlqerlrklrkklr 25 (27)
T 3twe_A 10 LEDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 3568888888887764
No 484
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=27.82 E-value=54 Score=30.93 Aligned_cols=33 Identities=6% Similarity=0.165 Sum_probs=18.3
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTLADVLRRL 58 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~ 58 (811)
|.||+.++.|..|.+|..|.-|...|.|+--|.
T Consensus 18 le~rleei~q~eq~~ekrik~ne~sL~dL~d~i 50 (233)
T 2yko_A 18 AEDEINEIKREGKFREKRIKRNEQSLQEIWDYV 50 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444555555555556666666666665554443
No 485
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=27.69 E-value=35 Score=24.94 Aligned_cols=27 Identities=22% Similarity=0.377 Sum_probs=14.3
Q ss_pred chhhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 25 SLRERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 25 ~~~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
+|.++|..|+..-...+.||..||..|
T Consensus 34 ~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 34 QLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555555555555555544
No 486
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=27.39 E-value=85 Score=23.78 Aligned_cols=41 Identities=12% Similarity=0.241 Sum_probs=35.5
Q ss_pred hhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhcccc
Q psy9770 26 LRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESSKN 66 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~~~ 66 (811)
.+.++.+|...+..+.+++...|+-+.++=|++.-||....
T Consensus 33 y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~ 73 (77)
T 3trt_A 33 YKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVD 73 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999988876543
No 487
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=26.99 E-value=28 Score=25.98 Aligned_cols=27 Identities=19% Similarity=0.345 Sum_probs=21.6
Q ss_pred chhhhHHHHHHHHHhcchhHHHHHHHH
Q psy9770 25 SLRERVSDLEKKVLEHGDEIVCLRSTL 51 (811)
Q Consensus 25 ~~~~r~~~le~~~~~~~~e~~~l~~~~ 51 (811)
-|-|||+.|||-=...|++|..++.-|
T Consensus 39 ivldRlA~lEqdE~~LE~~l~~i~~rl 65 (72)
T 2xu6_A 39 KLLGKIANIEQNQLMLEDNLKQIDDRL 65 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 367999999999999999988776543
No 488
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=26.89 E-value=74 Score=35.96 Aligned_cols=35 Identities=9% Similarity=-0.011 Sum_probs=27.6
Q ss_pred CccceEEecCCCCEEEEEcCCCcEEEEeCCCCCCCCc
Q psy9770 772 TDVNSCERSHDARVIATGDDFGKLKLYSYPAVQPKLC 808 (811)
Q Consensus 772 ~~I~~l~~s~dg~~Las~~~dg~v~vw~~~~~~~~~~ 808 (811)
..|.++.+ +..+|++-+.|.++|+|++.+++..+.
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 34555544 578999999999999999999986554
No 489
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=26.81 E-value=68 Score=24.71 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhh
Q psy9770 28 ERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQL 61 (811)
Q Consensus 28 ~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~ 61 (811)
+=|..|+.+.++++.|+.-||.-.-.+.+||+++
T Consensus 47 ~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L~~l 80 (80)
T 1nlw_A 47 LHIKKLEDSDRKAVHQIDQLQREQRHLKRQLEKL 80 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3466788888888888888887777777777653
No 490
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=26.76 E-value=75 Score=17.83 Aligned_cols=17 Identities=29% Similarity=0.427 Sum_probs=7.2
Q ss_pred HHHHHHHHhcchhHHHH
Q psy9770 31 SDLEKKVLEHGDEIVCL 47 (811)
Q Consensus 31 ~~le~~~~~~~~e~~~l 47 (811)
++|||++......|.-|
T Consensus 10 daleqkiaalkqkiasl 26 (28)
T 3ra3_A 10 DALEQKIAALKQKIASL 26 (28)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 34555444433333333
No 491
>1gk6_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, leucine zipper, fusion protein; 1.9A {Saccharomyces cerevisiae} SCOP: h.1.20.1
Probab=26.75 E-value=48 Score=23.80 Aligned_cols=18 Identities=28% Similarity=0.407 Sum_probs=8.3
Q ss_pred hhhhHHHHHHHHHhcchh
Q psy9770 26 LRERVSDLEKKVLEHGDE 43 (811)
Q Consensus 26 ~~~r~~~le~~~~~~~~e 43 (811)
+++.|+.||..++.-..|
T Consensus 5 ~q~~i~~le~el~~~r~e 22 (59)
T 1gk6_A 5 LEDKVEELLSKNYHLENE 22 (59)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 445555555444433333
No 492
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=26.46 E-value=58 Score=23.62 Aligned_cols=28 Identities=29% Similarity=0.332 Sum_probs=15.5
Q ss_pred chhhhHHHHHHHHHhcchhHHHHHHHHH
Q psy9770 25 SLRERVSDLEKKVLEHGDEIVCLRSTLA 52 (811)
Q Consensus 25 ~~~~r~~~le~~~~~~~~e~~~l~~~~a 52 (811)
+|.++|..||..-.....||..|+..++
T Consensus 26 ~Le~~v~~L~~~n~~L~~~v~~L~~e~~ 53 (62)
T 1jnm_A 26 RLEEKVKTLKAQNSELASTANMLREQVA 53 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555555555443
No 493
>2kke_A Uncharacterized protein; protein northeast structural genomics consortium (NESG), target TR5, PSI-2; NMR {Methanothermobacter thermautotrophicusstr}
Probab=26.11 E-value=36 Score=22.06 Aligned_cols=24 Identities=38% Similarity=0.566 Sum_probs=15.3
Q ss_pred hcchhHHHHHH------HHHHHHHHH--Hhhh
Q psy9770 39 EHGDEIVCLRS------TLADVLRRL--AQLE 62 (811)
Q Consensus 39 ~~~~e~~~l~~------~~a~~~rr~--~~~e 62 (811)
.--|||..||| ++.--+||+ |-+|
T Consensus 20 lypdeiealksrvpantsmsayirriilnhle 51 (53)
T 2kke_A 20 LYPDEIEALKSRVPANTSMSAYIRRIILNHLE 51 (53)
T ss_dssp ECHHHHHHHHTTCCSSSCHHHHHHHHHHHHHH
T ss_pred eChhHHHHHHhcCCCcccHHHHHHHHHHhhhc
Confidence 34588888887 355667774 4444
No 494
>1i27_A Transcription factor IIF; general transcription factor, RAP74, RAP30, TFIIF, RNA polymerase II, winged-helix domain; 1.02A {Homo sapiens} SCOP: a.4.5.30 PDB: 1j2x_A 2k7l_A*
Probab=26.11 E-value=30 Score=25.87 Aligned_cols=15 Identities=33% Similarity=0.457 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHh
Q psy9770 46 CLRSTLADVLRRLAQ 60 (811)
Q Consensus 46 ~l~~~~a~~~rr~~~ 60 (811)
-++.++|++||||+-
T Consensus 44 e~v~~~a~ILkki~p 58 (73)
T 1i27_A 44 QTVNVLAQILKRLNP 58 (73)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCH
Confidence 368899999999983
No 495
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=25.63 E-value=2.8e+02 Score=22.86 Aligned_cols=45 Identities=22% Similarity=0.407 Sum_probs=20.9
Q ss_pred EEEEcCCCCEEEEEEeCCeEEEEecCCcceeEEecCCCCCeEEEEEccCCCEEEE
Q psy9770 621 SATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLAL 675 (811)
Q Consensus 621 ~~~~spdg~~la~g~~dg~i~i~d~~~~~~~~~~~~~~~~i~~i~~spdg~~las 675 (811)
.+.+..+|.+++.. .++. .+|... .........+.+.++|.+++.
T Consensus 64 ~l~l~~dGNLVl~d-~~~~-~lW~S~--------~~~~~g~~~l~l~~~Gnlvl~ 108 (119)
T 1b2p_A 64 RAVLQPDGVLVVIT-NENV-TVWQSP--------VAGKAGHYVLVLQPDRNVVIY 108 (119)
T ss_dssp EEEECTTSCEEEEC-TTCC-EEEECS--------CCCCSSCEEEEECTTSCEEEE
T ss_pred EEEEccCCEEEEEe-CCCc-EEEcCC--------CCCCCCCEEEEEECCCcEEEE
Confidence 45566666655442 2232 355432 211122345566666665443
No 496
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=25.63 E-value=93 Score=24.85 Aligned_cols=26 Identities=23% Similarity=0.321 Sum_probs=16.9
Q ss_pred ccccccchhhhHHHHHHHHHhcchhH
Q psy9770 19 LETENESLRERVSDLEKKVLEHGDEI 44 (811)
Q Consensus 19 ~~~~~~~~~~r~~~le~~~~~~~~e~ 44 (811)
+.+.+..|..++.++|.+...+-..+
T Consensus 17 Lq~~~~~LE~~l~e~E~~~~~e~~~~ 42 (95)
T 3mov_A 17 GQKESRACLERIQELEDLLAKEKDNS 42 (95)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566778888888888766554443
No 497
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=25.57 E-value=40 Score=35.40 Aligned_cols=39 Identities=26% Similarity=0.361 Sum_probs=0.0
Q ss_pred ccccccchhhhHHHHHHHHHhcchhHHHHHHHH--HHHHHH
Q psy9770 19 LETENESLRERVSDLEKKVLEHGDEIVCLRSTL--ADVLRR 57 (811)
Q Consensus 19 ~~~~~~~~~~r~~~le~~~~~~~~e~~~l~~~~--a~~~rr 57 (811)
++.|...|++|+.+||++.+++..|+.-|+..| ++.+||
T Consensus 8 l~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr 48 (412)
T 3u06_A 8 LSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERK 48 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 498
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=25.54 E-value=80 Score=27.28 Aligned_cols=41 Identities=12% Similarity=0.099 Sum_probs=33.3
Q ss_pred cchhhhHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhcc
Q psy9770 24 ESLRERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLESS 64 (811)
Q Consensus 24 ~~~~~r~~~le~~~~~~~~e~~~l~~~~a~~~rr~~~~e~~ 64 (811)
..++.+...||+++++.+.||.-||.-|+.+-.++..++..
T Consensus 71 ~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e 111 (138)
T 3hnw_A 71 FKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKE 111 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34788999999999999999999998888777766655544
No 499
>1nha_A TFIIF-alpha, transcription initiation factor IIF, alpha subunit; transcription factor, human general transcription factor TFIIF, RAP74; NMR {Homo sapiens} SCOP: a.4.5.30 PDB: 1onv_A
Probab=25.42 E-value=31 Score=26.41 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHh
Q psy9770 45 VCLRSTLADVLRRLAQ 60 (811)
Q Consensus 45 ~~l~~~~a~~~rr~~~ 60 (811)
.-++.+||++||||+-
T Consensus 52 ~e~v~~~a~ILKki~p 67 (82)
T 1nha_A 52 EQTVNVLAQILKRLNP 67 (82)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHcCH
Confidence 3468999999999983
No 500
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=25.23 E-value=37 Score=26.66 Aligned_cols=24 Identities=29% Similarity=0.418 Sum_probs=0.0
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHH
Q psy9770 31 SDLEKKVLEHGDEIVCLRSTLADV 54 (811)
Q Consensus 31 ~~le~~~~~~~~e~~~l~~~~a~~ 54 (811)
..|+.+|++.+.|+..||..|.++
T Consensus 53 ~~Lr~~v~~L~~E~~~Lr~ll~~~ 76 (87)
T 1hjb_A 53 ERLQKKVEQLSRELSTLRNLFKQL 76 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC
Done!