RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9770
(811 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 79.4 bits (194), Expect = 2e-16
Identities = 53/288 (18%), Positives = 96/288 (33%), Gaps = 12/288 (4%)
Query: 452 VTCLAFTQGGEVL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGG 510
+ + + +L S +G +I+W + I + V + G+ ++ GG
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNYVACGG 116
Query: 511 KDGRLLQFDSNLQPTGYE---AQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGF 567
D ++ + + C L
Sbjct: 117 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ 176
Query: 568 SPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWS-KDIAEQAQSATFSP 626
+ GHT ++ +L+ P F++ D +LWD + + F P
Sbjct: 177 TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP 236
Query: 627 DGSIIIVGCIAG--RWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYV 684
+G+ G R + ++ H + I V FS G+LL G D V
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296
Query: 685 YEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWN 732
+ D+ K R G GH + ++ L ++D M + + S D L WN
Sbjct: 297 W----DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 78.2 bits (191), Expect = 4e-16
Identities = 40/319 (12%), Positives = 83/319 (26%), Gaps = 23/319 (7%)
Query: 287 VEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIG 346
++ +T+R GH I + + L+ + D + N V +
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWGTDSRLLVSA---SQDGKLIIWDSYTTNKVHAIPL---- 95
Query: 347 IGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAA 406
+ +++ + + +
Sbjct: 96 ---RSSWVMTCAYAP----------SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGH 142
Query: 407 EFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSG 466
+ + + T A + Q ++ +SG
Sbjct: 143 TGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202
Query: 467 DSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTG 526
+ + +W + HE + +IC G+ + G D FD
Sbjct: 203 ACDASAKLWDVREGMCRQTFTG-HESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261
Query: 527 YEAQIAEHLGGIRTVSEGR-GSQLIVGTTRNCILVGSLNLGFSPVVL-GHTDELWALAAH 584
+ GI +VS + G L+ G V VL GH + + L
Sbjct: 262 MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321
Query: 585 PSLSQFLTAGFDRIVQLWD 603
T +D +++W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
Score = 59.0 bits (141), Expect = 9e-10
Identities = 42/316 (13%), Positives = 91/316 (28%), Gaps = 35/316 (11%)
Query: 490 HEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQL 549
H ++++ + ++ + +DG+L+ + + T I + T +
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRSSWVMTCAYAPSGNY 111
Query: 550 IVGTTRNC------ILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWD 603
+ + + N+ S + GHT L ++G
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171
Query: 604 SMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQV 663
S + +PD + + G + D T I
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 664 VKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNS 723
+ F P+G A GS D ++++ + + IT + +S+ + +
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDL--RADQELMTYSHDNIICGITSVSFSKSGRLLLAGY 289
Query: 724 GDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDA 783
D+ W+A + L V+ + D
Sbjct: 290 DDFNCNVWDALKADRA---------------GVLA----------GHDNRVSCLGVTDDG 324
Query: 784 RVIATGDDFGKLKLYS 799
+ATG LK+++
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 36.3 bits (82), Expect = 0.012
Identities = 28/197 (14%), Positives = 63/197 (31%), Gaps = 16/197 (8%)
Query: 621 SATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDN 680
+ + D +++ G+ ++ DS T + + ++P G +A G DN
Sbjct: 60 AMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDN 119
Query: 681 YIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIP 740
+Y + GH+ +++ + +D+ + S+ L+ +
Sbjct: 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTT 179
Query: 741 QSSQLRDVVWESNSCTLTFTTIGIWPEG----------------ADGTDVNSCERSHDAR 784
+ DV+ S + G +D+N+ +
Sbjct: 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 785 VIATGDDFGKLKLYSYP 801
ATG D +L+
Sbjct: 240 AFATGSDDATCRLFDLR 256
Score = 32.0 bits (71), Expect = 0.25
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 701 TGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVW 750
GH + I + W DS + S S D +L+ W++ T ++ V
Sbjct: 52 RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 79.5 bits (194), Expect = 2e-16
Identities = 49/289 (16%), Positives = 96/289 (33%), Gaps = 12/289 (4%)
Query: 450 KYVTCLAFTQGGEVLSGDSNGNIIVW----TRGSNTISKFIRNVHEGSVFSICVLKEGSI 505
+ V + + + G + VW + +S+ + + S +L +G
Sbjct: 52 EVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT 111
Query: 506 ISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNL 565
+ GG+ L +D +A++ ++ S++ + +
Sbjct: 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 171
Query: 566 GFSPVVLGHTDELWALAAHPSLSQFL--TAGFDRIVQLWDSMSHSVVWSKDIAEQAQSAT 623
+ V A S T G D V+ WD + D Q S
Sbjct: 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLG 231
Query: 624 FSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIY 683
+ P G + VG + V+ + Y +H + + + KF+ GK +DN +
Sbjct: 232 YCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSL-KFAYCGKWFVSTGKDNLLN 290
Query: 684 VYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWN 732
+ + + + SS + D S D YI + SGD + +
Sbjct: 291 AWRTPYGASIFQ-----SKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 62.5 bits (150), Expect = 6e-11
Identities = 42/288 (14%), Positives = 73/288 (25%), Gaps = 5/288 (1%)
Query: 401 DTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQG 460
+ V A ++ T GK + W I G + + RD Y+
Sbjct: 52 EVVCAVTISN-PTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN--YIRSCKLLPD 108
Query: 461 GEVL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFD 519
G L G + +W + T + S + +
Sbjct: 109 GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 168
Query: 520 SNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELW 579
T G G++L G N + L G T +++
Sbjct: 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIF 228
Query: 580 ALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGR 639
+L P+ V++ S F+ G +
Sbjct: 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288
Query: 640 WLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEV 687
+ + + + + S D K + GS D VYEV
Sbjct: 289 LNAWRTPYGASI-FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 62.1 bits (149), Expect = 8e-11
Identities = 29/315 (9%), Positives = 78/315 (24%), Gaps = 27/315 (8%)
Query: 292 QRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEF- 350
Q + L H + + ++I + TG GK +++W+ S + +
Sbjct: 44 QINTLNHGEVVCAVTISNPTRHVYTG---------GKGCVKVWDISHPGNKSPVSQLDCL 94
Query: 351 --ERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEF 408
+ I G L E + +I ++T + + + +
Sbjct: 95 NRDNYIRSCKLLP--DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD 152
Query: 409 HPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDS 468
+ + + + I
Sbjct: 153 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN------- 205
Query: 469 NGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYE 528
V + + ++ +FS+ G ++ G + + N
Sbjct: 206 ----TVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261
Query: 529 AQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLS 588
+ ++ G+ + N + G S + + +
Sbjct: 262 HLHESCVLSLKFAYCGK--WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDK 319
Query: 589 QFLTAGFDRIVQLWD 603
+T D+ +++
Sbjct: 320 YIVTGSGDKKATVYE 334
Score = 51.3 bits (121), Expect = 2e-07
Identities = 36/294 (12%), Positives = 81/294 (27%), Gaps = 14/294 (4%)
Query: 353 SISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCS--VDTVVAAEFHP 410
+ ++ S G + VWD +++ C + + + + P
Sbjct: 53 VVCAVTIS-NPTRHVYT----GGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 411 LDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNG 470
D ++ G++ A T K + S +
Sbjct: 108 -DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166
Query: 471 NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ 530
+ + + + S K + G D + +D +
Sbjct: 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG----GLDNTVRSWDLREGRQLQQHD 222
Query: 531 IAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQF 590
+ + G L VG + + V +N + H + +L F
Sbjct: 223 FTSQIFSLGYCPTGE--WLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWF 280
Query: 591 LTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMD 644
++ G D ++ W + + ++ + S S D I+ G + V +
Sbjct: 281 VSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 47.5 bits (111), Expect = 4e-06
Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 4/128 (3%)
Query: 616 AEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDG-NEPIQVVKFSPDGKLLA 674
++ A S + DG + V L+ R A I+T E + V S + +
Sbjct: 9 SKPAYSFHVTADGQMQPV-PFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVY 67
Query: 675 LGSRDNYIYVYEVS-GDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNA 733
G + V+++S ++ C ++I D + L W+
Sbjct: 68 TGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126
Query: 734 GTCRQIPQ 741
+
Sbjct: 127 AAPTPRIK 134
Score = 45.6 bits (106), Expect = 1e-05
Identities = 30/249 (12%), Positives = 63/249 (25%), Gaps = 20/249 (8%)
Query: 572 LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH------SVVWSKDIAEQAQSATFS 625
L H + + A+ ++ + G V++WD S + + +S
Sbjct: 48 LNHGEVVCAVTISNP-TRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL 106
Query: 626 PDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVY 685
PDG +IVG A + D + + S + +
Sbjct: 107 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166
Query: 686 EVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQI------ 739
++ R + + + ++ G Q
Sbjct: 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ 226
Query: 740 -------PQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDF 792
P L + SN L + + V S + ++ + +
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD 286
Query: 793 GKLKLYSYP 801
L + P
Sbjct: 287 NLLNAWRTP 295
Score = 43.6 bits (101), Expect = 5e-05
Identities = 31/254 (12%), Positives = 59/254 (23%), Gaps = 21/254 (8%)
Query: 285 YNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSI 344
N +Q L + I+ + P+ + G A + L + +
Sbjct: 83 GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAP 142
Query: 345 IGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETK-----CS 399
S + FS G I+
Sbjct: 143 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG 202
Query: 400 VDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYK-------------KQGIFEMIR 446
+D V + R S I G + +
Sbjct: 203 LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLH 262
Query: 447 DKPKYVTCLAFTQGGE-VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSI 505
V L F G+ +S + + W + + ++ SV S + +
Sbjct: 263 LHESCVLSLKFAYCGKWFVSTGKDNLLNAWR--TPYGASIFQSKESSSVLSCDISVDDKY 320
Query: 506 ISAGGKDGRLLQFD 519
I G D + ++
Sbjct: 321 IVTGSGDKKATVYE 334
Score = 33.2 bits (74), Expect = 0.11
Identities = 5/52 (9%), Positives = 12/52 (23%), Gaps = 8/52 (15%)
Query: 284 LYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWN 335
+ + + I + I TG D + ++
Sbjct: 291 AWRTPYGASIFQSKESSSVLSCDISVDDKYIVTG---SGDKK-----ATVYE 334
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 78.6 bits (192), Expect = 2e-16
Identities = 42/302 (13%), Positives = 97/302 (32%), Gaps = 27/302 (8%)
Query: 452 VTCLAFTQGGEVL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGG 510
VT + F V+ S + I VW + + ++ H SV I G ++++
Sbjct: 20 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGKLLASCS 78
Query: 511 KDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPV 570
D + +D +H ++ + + +
Sbjct: 79 ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 138
Query: 571 VLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH--------------SVVWSKDIA 616
GH + + + + + + D+ V++W + + W+ + +
Sbjct: 139 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESS 198
Query: 617 EQA-------QSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPD 669
+ ++ G ++ G + D T + ++ V F
Sbjct: 199 YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG 258
Query: 670 GKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELL 729
GK + + D + V+ D + + H F+T LD+ + + Y+ + S D +
Sbjct: 259 GKFILSCADDKTLRVW----DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 314
Query: 730 YW 731
W
Sbjct: 315 VW 316
Score = 68.6 bits (166), Expect = 4e-13
Identities = 44/337 (13%), Positives = 98/337 (29%), Gaps = 37/337 (10%)
Query: 351 ERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHP 410
++ + F + A D I VWD++ D + SV +
Sbjct: 17 RSPVTRVIFHP-VFSVMVSA---SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 411 LDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNG 470
L + +F + T++ + P G ++S +
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN---------GDHIVSASRDK 123
Query: 471 NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ 530
I +W + H V + ++G++I++ D + + + +A+
Sbjct: 124 TIKMWEVQTGYC-VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV--VATKECKAE 180
Query: 531 IAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQF 590
+ EH + +S S S + +
Sbjct: 181 LREHRHVVECISWAPES--------------------SYSSISEATGSETKKSGKPGPFL 220
Query: 591 LTAGFDRIVQLWDSMSHSVVWSKDIAEQA-QSATFSPDGSIIIVGCIAGRWLVMDSETRE 649
L+ D+ +++WD + + + + + F G I+ V D + +
Sbjct: 221 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 280
Query: 650 AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYE 686
+ + F + GS D + V+E
Sbjct: 281 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 64.8 bits (156), Expect = 8e-12
Identities = 38/282 (13%), Positives = 82/282 (29%), Gaps = 54/282 (19%)
Query: 573 GHTDELWALAAHPSLSQFLTAGFDRIVQLWD----------------------------- 603
GH + + HP S ++A D +++WD
Sbjct: 15 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 74
Query: 604 --------------SMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETRE 649
+ S + P+G I+ + + +T
Sbjct: 75 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY 134
Query: 650 AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITH 709
T E +++V+ + DG L+A S D + V+ H +
Sbjct: 135 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW----VVATKECKAELREHRHVVEC 190
Query: 710 LDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDV-VWESNSCTLTFTTIGIWPEG 768
+ W+ +S Y + + + S+ + + +W+ ++ T +G
Sbjct: 191 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG----- 245
Query: 769 ADGTDVNSCERSHDARVIATGDDFGKLKLYSYPAVQPKLCLS 810
V + I + D L+++ Y + L+
Sbjct: 246 -HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 286
Score = 59.8 bits (143), Expect = 4e-10
Identities = 51/347 (14%), Positives = 100/347 (28%), Gaps = 50/347 (14%)
Query: 292 QRHYL-GHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEF 350
+++ L GH + + HP ++ + DA I++W+ + G+F
Sbjct: 9 EKYALSGHRSPVTRVIFHPVFSVMVSA---SEDA-----TIKVWDYET---------GDF 51
Query: 351 ERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHP 410
ER++ + S D + I V + P
Sbjct: 52 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP 111
Query: 411 LDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNG 470
+ + I W + + + G + S ++
Sbjct: 112 NGDHIVSASRDKTIKMWEVQ------TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 165
Query: 471 NIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQ 530
+ VW + +R H V I E S S
Sbjct: 166 TVRVWVVATKECKAELRE-HRHVVECISWAPESSYSS----------------------- 201
Query: 531 IAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL-GHTDELWALAAHPSLSQ 589
I+E G S G L+ G+ I + ++ G + L GH + + + H
Sbjct: 202 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 261
Query: 590 FLTAGFDRIVQLWDSMSHSVVWS-KDIAEQAQSATFSPDGSIIIVGC 635
L+ D+ +++WD + + + S F ++ G
Sbjct: 262 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 308
Score = 44.0 bits (102), Expect = 4e-05
Identities = 29/197 (14%), Positives = 56/197 (28%), Gaps = 25/197 (12%)
Query: 290 QTQRHYLGHTDDIKCLSIHPNKLLIATG----QVAGHDAREGKP------HIRIWNSVSL 339
+ + GH + ++ + + + LIA+ V + H + +S
Sbjct: 134 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISW 193
Query: 340 FTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCS 399
S K G FL + D I +WD G +
Sbjct: 194 APESSYSSISEATGSETKKSGKP--GPFLLSG--SRDKTIKMWDVST---GMCLMTLVGH 246
Query: 400 VDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQ 459
+ V FH + + + W + + +VT L F +
Sbjct: 247 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT-------LNAHEHFVTSLDFHK 299
Query: 460 GGEVL-SGDSNGNIIVW 475
+ +G + + VW
Sbjct: 300 TAPYVVTGSVDQTVKVW 316
Score = 32.0 bits (71), Expect = 0.27
Identities = 11/50 (22%), Positives = 18/50 (36%)
Query: 701 TGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVW 750
+GH S +T + + + S S D + W+ T D V
Sbjct: 14 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ 63
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 71.0 bits (172), Expect = 1e-13
Identities = 43/324 (13%), Positives = 95/324 (29%), Gaps = 47/324 (14%)
Query: 452 VTCLAFTQGGEVLSGDSNGNIIVW-----------------TRGSNTISKFIRNVHEGSV 494
V C+ F+ GE L+ N V+ + ++ + +
Sbjct: 65 VCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYI 124
Query: 495 FSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTT 554
S+C +G ++ G +D + +D + Q E +
Sbjct: 125 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD 184
Query: 555 RNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKD 614
R + S + + DR V++WDS + +V D
Sbjct: 185 RTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLD 244
Query: 615 IAEQAQ--------SATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDG--------- 657
++ S F+ DG ++ G + + + + S
Sbjct: 245 SENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTY 304
Query: 658 ---NEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLD--- 711
+ + V + + + + GS+D + + D + + + GH + + +
Sbjct: 305 IGHKDFVLSVATTQNDEYILSGSKDRGVLFW----DKKSGNPLLMLQGHRNSVISVAVAN 360
Query: 712 ---WSEDSMYIRSNSGDYELLYWN 732
+ + SGD + W
Sbjct: 361 GSSLGPEYNVFATGSGDCKARIWK 384
Score = 62.1 bits (149), Expect = 1e-10
Identities = 44/343 (12%), Positives = 105/343 (30%), Gaps = 38/343 (11%)
Query: 289 EQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSII--- 345
+ L HT + C+ + +ATG +++ V+ +
Sbjct: 52 DVELHKSLDHTSVVCCVKFSNDGEYLATG---------CNKTTQVYRVSDGSLVARLSDD 102
Query: 346 -GIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVV 404
+ +++ S +D + + + + +
Sbjct: 103 SAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGH 162
Query: 405 AAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVL 464
+ + LD S T+ + + I D V G +
Sbjct: 163 EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSP-GDGKYIA 221
Query: 465 SGDSNGNIIVWTRGSNTISKFIRNV------HEGSVFSICVLKEGSIISAGGKDGRLLQF 518
+G + + VW + + + + + H+ SV+S+ ++G + +G D + +
Sbjct: 222 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 281
Query: 519 D----------SNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIV-GTTRNCILVGSLNLGF 567
+ E H + +V+ + + I+ G+ +L G
Sbjct: 282 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341
Query: 568 SPVVL-GHTDELWALAA------HPSLSQFLTAGFDRIVQLWD 603
++L GH + + ++A P + F T D ++W
Sbjct: 342 PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 60.6 bits (145), Expect = 3e-10
Identities = 56/388 (14%), Positives = 108/388 (27%), Gaps = 55/388 (14%)
Query: 449 PKYVTCLAFTQGGEVLSGDSNGNIIVW---TRGSNTISKFIRNVHEGSVFSICVLKEGSI 505
P ++ L + L +N I++ + H V + +G
Sbjct: 17 PPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEY 76
Query: 506 ISAGGKDGRLLQFDSNLQP---------------TGYEAQIAEHLGGIRTVSEGRGSQLI 550
++ G + S+ + IR+V + +
Sbjct: 77 LATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 136
Query: 551 VGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFL---TAGFDRIVQLWDSMSH 607
+ ++ V++ E + S +G +
Sbjct: 137 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 196
Query: 608 SVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNE-------P 660
+ A DG I G + V DSET NE
Sbjct: 197 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS 256
Query: 661 IQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRK--------YSRVGRCTGHSSFITHLDW 712
+ V F+ DG+ + GS D + ++ + + K + GH F+ +
Sbjct: 257 VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT 316
Query: 713 SEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGT 772
+++ YI S S D +L+W+ + + R+ V
Sbjct: 317 TQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI-------------------SVA 357
Query: 773 DVNSCERSHDARVIATGDDFGKLKLYSY 800
N + V ATG K +++ Y
Sbjct: 358 VANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 44.0 bits (102), Expect = 6e-05
Identities = 35/258 (13%), Positives = 67/258 (25%), Gaps = 46/258 (17%)
Query: 572 LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSII 631
L HT + + ++L G ++ Q++ S+V
Sbjct: 59 LDHTSVVCCVKFSND-GEYLATGCNKTTQVYRVSDGSLVAR------------------- 98
Query: 632 IVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDS 691
++ S + I+ V FSPDGK LA G+ D I ++++
Sbjct: 99 ----LSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK 154
Query: 692 RKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVW- 750
G S + + L + + V
Sbjct: 155 IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSP 214
Query: 751 --------------------ESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGD 790
E+ + G + V S + D + + +G
Sbjct: 215 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS-VYSVVFTRDGQSVVSGS 273
Query: 791 DFGKLKLYSYPAVQPKLC 808
+KL++ K
Sbjct: 274 LDRSVKLWNLQNANNKSD 291
Score = 34.8 bits (78), Expect = 0.045
Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 11/138 (7%)
Query: 658 NEPIQVVKFSPDGK---LLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSE 714
++PI D + ++Y +Y + + + H+S + + +S
Sbjct: 13 SKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSN 72
Query: 715 DSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDV 774
D Y+ + + + + + S + + + +
Sbjct: 73 DGEYLAT-GCNKTTQVYRVSDGSLVARLSDDSAANKDP-------ENLNTSSSPSSDLYI 124
Query: 775 NSCERSHDARVIATGDDF 792
S S D + +ATG +
Sbjct: 125 RSVCFSPDGKFLATGAED 142
Score = 30.9 bits (68), Expect = 0.63
Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 18/102 (17%)
Query: 290 QTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGE 349
+ Y+GH D + ++ N I +G + W+ S + ++
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG--------VLFWDKKSGNPLLMLQ--G 348
Query: 350 FERSISCLSFSKA-----DGGTFLCAVDEGNDYNISVWDWQK 386
S+ ++ + + F D +W ++K
Sbjct: 349 HRNSVISVAVANGSSLGPEYNVFATG---SGDCKARIWKYKK 387
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 67.6 bits (163), Expect = 1e-12
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 652 SIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLD 711
+ H+ EPI ++ D +A+ ++ +++YE SG+ K+ +V H+ +T +D
Sbjct: 1 AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN--KWVQVHELKEHNGQVTGVD 58
Query: 712 WSEDSMYIRSNSGDYELLYWNAGTCRQ 738
W+ DS I + D W
Sbjct: 59 WAPDSNRIVTCGTDRNAYVWTLKGRTW 85
Score = 51.4 bits (121), Expect = 2e-07
Identities = 17/114 (14%), Positives = 40/114 (35%), Gaps = 2/114 (1%)
Query: 621 SATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHT--DGNEPIQVVKFSPDGKLLALGSR 678
++ D + I + + + + +H + N + V ++PD +
Sbjct: 12 CHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT 71
Query: 679 DNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWN 732
D YV+ + G + K + V ++ +E + S S + Y+
Sbjct: 72 DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 125
Score = 51.0 bits (120), Expect = 3e-07
Identities = 43/401 (10%), Positives = 102/401 (25%), Gaps = 57/401 (14%)
Query: 298 HTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCL 357
+ I C + + ++ IA + I+ V + + E ++ +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHE--------VHIYEKSGNKWVQVHELKEHNGQVTGV 57
Query: 358 SFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIV 417
++ D + G D N VW + + P ++ V
Sbjct: 58 DWAP-DSNRIVTC---GTDRNAYVWTLKGRTW-KPTLVILRINRAARCVRWAPNEKKFAV 112
Query: 418 TCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSN-GNIIVWT 476
G I+ + + + V L + +L+ S +++
Sbjct: 113 GSGSRVISICYFE---QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 169
Query: 477 RGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLG 536
+ + GS L + + G
Sbjct: 170 AYIKEVEERPAPTPWGSKMPFGELMF---------------------------ESSSSCG 202
Query: 537 GIRTVSEGRGSQLIVGTTR-NCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGF 595
+ V + + + + + + + L + S + AG
Sbjct: 203 WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH 262
Query: 596 DRIVQLWDSMSHSVVWS----KDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAY 651
D L+ S + S D+ +Q+ + + A +
Sbjct: 263 DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL-D 321
Query: 652 SIHTDGNEPIQVVKFSPDGK----LLALGSRDNYIYVYEVS 688
S+H + + + GK D + +++V
Sbjct: 322 SLHKN---SVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
Score = 49.5 bits (116), Expect = 9e-07
Identities = 35/324 (10%), Positives = 91/324 (28%), Gaps = 32/324 (9%)
Query: 297 GHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISC 356
H + + P+ I T G D + +W + I R+ C
Sbjct: 49 EHNGQVTGVDWAPDSNRIVTC---GTDR-----NAYVWTLKGRTWKPTLVILRINRAARC 100
Query: 357 LSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNI 416
+ ++ + + IS+ +++ + K + + V + + +
Sbjct: 101 VRWAPNEKKFAVG----SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL 156
Query: 417 VTCG-KSHINFWTIDAGGTLYKKQGIFEMIR-----------DKPKYVTCLAFTQGGEVL 464
++ + + +V + F+ G +
Sbjct: 157 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRV 216
Query: 465 SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQP 524
+ S+ + + ++ + ++ + E S++ A G D + F
Sbjct: 217 AWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLV-AAGHDCFPVLFT--YDS 273
Query: 525 TGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNC-ILVGSLNLGFSPVVLGHTDELWALAA 583
+ L + S+ + + + + H + + ++
Sbjct: 274 AAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISV 333
Query: 584 HP----SLSQFLTAGFDRIVQLWD 603
SQF T G D + +WD
Sbjct: 334 LSGGKAKCSQFCTTGMDGGMSIWD 357
Score = 43.7 bits (101), Expect = 6e-05
Identities = 35/275 (12%), Positives = 87/275 (31%), Gaps = 22/275 (8%)
Query: 546 GSQLIVGTTRNCILVGSLNLGFSPVVL---GHTDELWALAAHPSLSQFLTAGFDRIVQLW 602
+Q+ + + + + + V H ++ + P ++ +T G DR +W
Sbjct: 19 RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 78
Query: 603 DSMSHSVV---WSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMD----SETREAYSIHT 655
+ I A+ ++P+ VG + + ++ I
Sbjct: 79 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK 138
Query: 656 DGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSED 715
+ + + P+ LLA GS D ++ + G L +
Sbjct: 139 PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS 198
Query: 716 SMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVN 775
S + + ++A R S + +++ + + ++ +
Sbjct: 199 SSCGWVHG-----VCFSANGSRVAWVSHDSTVCLADADKK------MAVATLASETLPLL 247
Query: 776 SCERSHDARVIATGDDFGKLKLYSYPAVQPKLCLS 810
+ ++ ++A G D L++Y + KL
Sbjct: 248 AVTFITESSLVAAGHD-CFPVLFTYDSAAGKLSFG 281
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 64.5 bits (155), Expect = 1e-11
Identities = 36/364 (9%), Positives = 85/364 (23%), Gaps = 45/364 (12%)
Query: 297 GHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWN-SVSLFTVSIIGIGEFERSIS 355
D I + I P+K L+ D + ++ + V ++ ++ +
Sbjct: 9 APKDYISDIKIIPSKSLLLIT---SWDGS-----LTVYKFDIQAKNVDLLQSLRYKHPLL 60
Query: 356 CLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNN 415
C +F + T + + D
Sbjct: 61 CCNFIDNTDLQIYVG-----TVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKL 115
Query: 416 IVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVW 475
I I G K K T ++ G +N + +
Sbjct: 116 IAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWF 175
Query: 476 ---TRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIA 532
+ + + + KE + DGR+ + Q Y +
Sbjct: 176 RLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235
Query: 533 EHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLT 592
R + + ++ P T
Sbjct: 236 FAFRCHRLNLKDT---------------------------NLAYPVNSIEFSPRHKFLYT 268
Query: 593 AGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYS 652
AG D I+ W+ + + + + + +I+ + + ++ +
Sbjct: 269 AGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT-SDDTFKTNAAIDQTIE 327
Query: 653 IHTD 656
++
Sbjct: 328 LNAS 331
Score = 50.2 bits (118), Expect = 5e-07
Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Query: 654 HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWS 713
D I +K P LL + S D + VY+ ++ + + + ++
Sbjct: 10 PKDY---ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQS-LRYKHPLLCCNFI 65
Query: 714 EDSMYIRSNSGDYELLYWN 732
+++ +
Sbjct: 66 DNTDLQIYVGTVQGEILKV 84
Score = 42.9 bits (99), Expect = 9e-05
Identities = 33/291 (11%), Positives = 74/291 (25%), Gaps = 27/291 (9%)
Query: 486 IRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFD-SNLQPTGYEAQIAEHLGGIRTV--S 542
I + + I ++ S++ DG L + Q + +
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65
Query: 543 EGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLW 602
+ Q+ VGT + IL L S L + + + +
Sbjct: 66 DNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125
Query: 603 DSMSHSVVWSKDIAEQAQSATFSPDGSIIIV-------------GCIAGRWLVMDSETRE 649
+ + S I + + L + +
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185
Query: 650 AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRC--------- 700
+ V + + A S D + V Y+ R
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245
Query: 701 --TGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVV 749
T + + +++S ++ + D + WN T ++I ++ +
Sbjct: 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS 296
Score = 29.4 bits (64), Expect = 2.0
Identities = 6/63 (9%), Positives = 14/63 (22%), Gaps = 7/63 (11%)
Query: 702 GHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQ-------SSQLRDVVWESNS 754
+I+ + + S D L + + L + N+
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT 68
Query: 755 CTL 757
Sbjct: 69 DLQ 71
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 60.3 bits (144), Expect = 4e-10
Identities = 48/423 (11%), Positives = 107/423 (25%), Gaps = 71/423 (16%)
Query: 297 GHTDDIKCLSIHPNKLLIAT--GQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSI 354
H DI +S + + + G + D + S S F +
Sbjct: 12 AHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK--SGLHHVDVL 69
Query: 355 SCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSV-------DTVVAAE 407
+ + ++ + + D K+ K + + A +
Sbjct: 70 QAIERDAFELCLVATT---SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK 126
Query: 408 FHPLDRNN-----IVTCGKSHINFWTIDAGG-----------TLYKKQGIFEMIRDKPKY 451
+ + + T K W + QG E ++
Sbjct: 127 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 186
Query: 452 VTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK 511
T + ++ G + +G +NG + + + + H S +
Sbjct: 187 ATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRS---------- 236
Query: 512 DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVV 571
S A + G I G ++ + SL
Sbjct: 237 -----VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA---- 287
Query: 572 LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVW-----SKDIAEQAQSATFSP 626
H+ + +L+ + S +AG+D ++ WD + + DI +
Sbjct: 288 --HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDE 345
Query: 627 DGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYE 686
G + + + + + + + L D I +
Sbjct: 346 HGDSLAEPGVFDVKFL---------------KKGWRSGMGADLNESLCCVCLDRSIRWFR 390
Query: 687 VSG 689
+G
Sbjct: 391 EAG 393
Score = 32.9 bits (73), Expect = 0.14
Identities = 35/365 (9%), Positives = 94/365 (25%), Gaps = 47/365 (12%)
Query: 412 DRNNIVTCGK-SHINFWTIDAGGTLYKKQGIFEMIRDK-----PKYVTCLAF--TQGGEV 463
+ V+C ++ W K + K + + + V
Sbjct: 23 CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 82
Query: 464 LSGDSNGNIIVWTRGSNTISKFIRN---------VHEGSVFSICVLKEG-----SIISAG 509
+ +G+++ + +K + + + S +++ + A
Sbjct: 83 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT 142
Query: 510 GKDGRLLQFDSNLQPTGYEA-QIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFS 568
G + P E+ + + + S + + + L
Sbjct: 143 DVKGTTYIWK--FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGL--- 197
Query: 569 PVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDG 628
+ G + ++ +L + + SV +S + A
Sbjct: 198 -IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ---GSLLAIAHDSN 253
Query: 629 SIIIVGCIAGRWLVM------DSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYI 682
S + + + + +A + + + F+ G+ L D +
Sbjct: 254 SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 313
Query: 683 YVYEVSGDSRKYSRVGRCTGHSSFI----THLDWSEDSMYIRSNSGDYELLYWNAGTCRQ 738
+ D + R+ H I L E + G +++ + G
Sbjct: 314 RFW----DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAE-PGVFDVKFLKKGWRSG 368
Query: 739 IPQSS 743
+
Sbjct: 369 MGADL 373
Score = 30.2 bits (66), Expect = 1.1
Identities = 12/90 (13%), Positives = 22/90 (24%), Gaps = 2/90 (2%)
Query: 702 GHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTT 761
H + I + + S SGD L W+ + +
Sbjct: 12 AHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 762 IGIWPEGADGTDVNSCERSHDARVIATGDD 791
I + + V + S D +
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITRE 99
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 58.3 bits (139), Expect = 2e-09
Identities = 32/362 (8%), Positives = 68/362 (18%), Gaps = 42/362 (11%)
Query: 399 SVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFT 458
S+ + A +F PLD + I + + L + + +
Sbjct: 1 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEP---------LRIRYVRRG 51
Query: 459 QGGEVL---SGDSNGNIIVWTRGSNTISKFIRN-------VHEGSVFSICVLKEGSIISA 508
+V + ++ + KF N + + V + I
Sbjct: 52 GDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMT 111
Query: 509 GGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFS 568
+ + G I V +
Sbjct: 112 VDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 171
Query: 569 PVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQA--------Q 620
+A A + + D + + +
Sbjct: 172 FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPN 231
Query: 621 SATFSPDGSIIIVGCIAGRWLVM-------DSETREAYSIHTDGNEPIQVVKFSPDGKLL 673
P G + D V
Sbjct: 232 PTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYY 291
Query: 674 ALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNA 733
+ Y+V + T + +T L S D + D ++ +
Sbjct: 292 QGAPEKGVLLKYDVKT--------RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPL 343
Query: 734 GT 735
Sbjct: 344 EK 345
Score = 45.2 bits (105), Expect = 2e-05
Identities = 33/351 (9%), Positives = 67/351 (19%), Gaps = 33/351 (9%)
Query: 358 SFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIV 417
FS DG + V G + V + D
Sbjct: 9 DFSPLDG-DLIAFVSRGQAFIQDVSGTYVLKVPEP--------LRIRYVRRGG-DTKVAF 58
Query: 418 TCG---KSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIV 474
G + + G ++ + + A +
Sbjct: 59 IHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK 118
Query: 475 WTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEH 534
T + I + +++ A E+
Sbjct: 119 PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTEN 178
Query: 535 LGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSP--------VVLGHTDELWALAAHPS 586
+ L + R+ + V+ P
Sbjct: 179 SHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPR 238
Query: 587 LSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQA--------QSATFSPDGSIIIVGCIAG 638
+D S +V + G
Sbjct: 239 SMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKG 298
Query: 639 RWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSG 689
L D +TR+ + + ++ S D K + + D IY + +
Sbjct: 299 VLLKYDVKTRKVTEVK----NNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 55.2 bits (131), Expect = 1e-08
Identities = 38/349 (10%), Positives = 102/349 (29%), Gaps = 35/349 (10%)
Query: 331 IRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQ--KSD 388
+ + ++ + +I I + + + GG A ++ ++ D ++
Sbjct: 13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAP--GGRIAYATVNKSE-SLVKIDLVTGETL 69
Query: 389 RGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYK----KQGIFEM 444
++ + V ++ A P + + + + T +
Sbjct: 70 GRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK 129
Query: 445 IRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGS 504
+ P+ +T LA+ + G L G ++ + + +
Sbjct: 130 AFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKP---IQSWEAETYAQPDVL 186
Query: 505 IISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLN 564
+ + ++ + R +L L
Sbjct: 187 AVWNQHESSGVMATPF-------------------YTARKDIDPADPTAYRTGLLTMDLE 227
Query: 565 LGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATF 624
G + +++ + + ++ G +++ +D ++ + + S
Sbjct: 228 TGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNV 287
Query: 625 SPDGSIIIVGCIAGRWLVMDSETREAY-SIHTDGNEPIQV---VKFSPD 669
S DGS + +G G D+ET E + GN + + F+ D
Sbjct: 288 STDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRD 336
Score = 47.1 bits (110), Expect = 4e-06
Identities = 11/114 (9%), Positives = 26/114 (22%), Gaps = 1/114 (0%)
Query: 574 HTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIV 633
A + + + D + + + + + + +
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255
Query: 634 GCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEV 687
D E + + V S DG + LG + Y+
Sbjct: 256 FGAYNVLESFDLEKNASIKRVPLPHSYYSVN-VSTDGSTVWLGGALGDLAAYDA 308
Score = 32.9 bits (73), Expect = 0.15
Identities = 30/313 (9%), Positives = 63/313 (20%), Gaps = 38/313 (12%)
Query: 463 VLSGDSNGNIIVWTRGSNTISKFIRNVHEG-SVFSICVLKEGS-IISAGGKDGRLLQFD- 519
+L+ ++V + K I G + V G + K L++ D
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 520 SNLQPTGYEAQIAEHLGGIRTVS---------------EGRGSQLIVGTTRNCILVGSLN 564
+ G R + +
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 565 LGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATF 624
++ LA S+ G D V + ++V K I
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDP--EAGTLVEDKPIQSWEAETYA 181
Query: 625 SPDGS--------------IIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDG 670
PD + ++ + E D
Sbjct: 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV 241
Query: 671 KLLALGSRDNYIYVYEVSGDSRKYS----RVGRCTGHSSFITHLDWSEDSMYIRSNSGDY 726
+ + + + ++ S D +
Sbjct: 242 FYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALG 301
Query: 727 ELLYWNAGTCRQI 739
+L ++A T +
Sbjct: 302 DLAAYDAETLEKK 314
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 54.4 bits (129), Expect = 2e-08
Identities = 50/355 (14%), Positives = 113/355 (31%), Gaps = 38/355 (10%)
Query: 452 VTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK 511
+TCL F G ++SG + + VW+ + + + H G V+S + +
Sbjct: 20 ITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQMRD-----NIIIS 72
Query: 512 DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVV 571
TG +++ G+ + V + G V
Sbjct: 73 GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHV 132
Query: 572 LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSII 631
L + ++ +D +V++WD + + + + + + DG +
Sbjct: 133 LMGHVA-AVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQFDGIHV 190
Query: 632 IVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDS 691
+ G + V D ET IHT +L G+ D+ + ++++
Sbjct: 191 VSGSLDTSIRVWDVETGN--CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI---- 244
Query: 692 RKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWE 751
+ + + + ++ + ++ + + GT + +W+
Sbjct: 245 -------KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVK-----------LWD 286
Query: 752 SNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIATGDDFG----KLKLYSYPA 802
+ + + G+ G V S+ V A G G KL + +
Sbjct: 287 LKTGEFIRNLVTLESGGSGGV-VWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340
Score = 44.4 bits (103), Expect = 4e-05
Identities = 40/348 (11%), Positives = 89/348 (25%), Gaps = 37/348 (10%)
Query: 354 ISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDR 413
I+CL F G + +D + VW G + V +++
Sbjct: 20 ITCLQF---CGNRIVSG---SDDNTLKVWSAVT---GKCLRTLVGHTGGVWSSQMRDNII 70
Query: 414 NNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNII 473
+ T + + + G +
Sbjct: 71 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL 130
Query: 474 VWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAE 533
G +R V + + + + L Y Q
Sbjct: 131 HVLMG---HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-- 185
Query: 534 HLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTA 593
G ++ G+ I V + + + + + ++
Sbjct: 186 -----------DGIHVVSGSLDTSIRVWDVE-TGNCIHTLTGHQSLTSGMELKDNILVSG 233
Query: 594 GFDRIVQLWDSMSHSVVW--SKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSET---- 647
D V++WD + + Q+ + + +I G + D +T
Sbjct: 234 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 293
Query: 648 REAYSIHTDG-NEPIQVVKFSPDGKLLALGSRDN----YIYVYEVSGD 690
R ++ + G + ++ S + A+GSR+ + V + D
Sbjct: 294 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 341
Score = 39.8 bits (91), Expect = 0.001
Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 20/159 (12%)
Query: 374 GNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSHINFWTIDAGG 433
D +I VWD + + H +T + + D + S + W I G
Sbjct: 194 SLDTSIRVWDVETGNCIHTLTGHQSLTSGM-----ELKDNILVSGNADSTVKIWDIKTGQ 248
Query: 434 TLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSN----TISKFIRNV 489
L QG + V++ +G + +W + +
Sbjct: 249 CLQTLQGPNKHQSAVTCLQFN-----KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG 303
Query: 490 HEGSVFSICVLKEGSIISAGGKDG------RLLQFDSNL 522
G V+ I + + G ++G +L FD ++
Sbjct: 304 SGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 342
Score = 35.9 bits (81), Expect = 0.017
Identities = 30/240 (12%), Positives = 72/240 (30%), Gaps = 19/240 (7%)
Query: 573 GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIII 632
GH D + ++ ++ D +++W +++ + + +S I
Sbjct: 14 GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRT---LVGHTGGVWSSQMRDNI 69
Query: 633 VGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR 692
+ + + IHT V K + GSRD + V+ D
Sbjct: 70 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW----DIE 125
Query: 693 KYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWES 752
+ GH + + + + + + ++ TC Q R +
Sbjct: 126 TGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 185
Query: 753 NSCTLTF----TTIGIWPEG-------ADGTDVNSCERSHDARVIATGDDFGKLKLYSYP 801
+ + T+I +W G + ++ +G+ +K++
Sbjct: 186 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK 245
Score = 29.4 bits (64), Expect = 1.7
Identities = 18/193 (9%), Positives = 42/193 (21%), Gaps = 17/193 (8%)
Query: 624 FSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIY 683
G+ I+ G V + T + + + +
Sbjct: 23 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNII------ISGSTD 76
Query: 684 VYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQI---- 739
++ + GH+S + + E + S + G C +
Sbjct: 77 RTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGH 136
Query: 740 -----PQSSQLRDVVWESNSCTLTFTTIGIWPEGA--DGTDVNSCERSHDARVIATGDDF 792
R VV + + G D + +G
Sbjct: 137 VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLD 196
Query: 793 GKLKLYSYPAVQP 805
++++
Sbjct: 197 TSIRVWDVETGNC 209
Score = 29.0 bits (63), Expect = 2.6
Identities = 6/49 (12%), Positives = 14/49 (28%), Gaps = 4/49 (8%)
Query: 287 VEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWN 335
+ G + + KL+ A G G + + + +
Sbjct: 293 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG----TEETKLLVLD 337
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 51.9 bits (123), Expect = 2e-07
Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 14/187 (7%)
Query: 590 FLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETRE 649
+T + L D S +V D + S G ++V R ++D +E
Sbjct: 35 SVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKE 94
Query: 650 AYSIHT--DGNEPIQVV---KFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHS 704
+ G E V + + G+ + G++ + ++ G +
Sbjct: 95 PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM-DGETLEPKQIVSTRGMT 153
Query: 705 SFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGI 764
I ++ E + T + + +V + LT T+IG
Sbjct: 154 VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVL--------LVNYKDIDNLTVTSIGA 205
Query: 765 WPEGADG 771
P ADG
Sbjct: 206 APFLADG 212
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 51.3 bits (121), Expect = 3e-07
Identities = 35/355 (9%), Positives = 87/355 (24%), Gaps = 42/355 (11%)
Query: 305 LSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCLSFSKADG 364
++ + + + + + S + + + + D
Sbjct: 2 PALKAGHEYMIVTNYPNN--------LHVVDVASDTVYKSCVMPD-KFGPGTAMMAP-DN 51
Query: 365 GTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAE---FHPLDRNNIVTCGK 421
T + D I D + + + P + T
Sbjct: 52 RTAYVLNNHYGD--IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNP 109
Query: 422 SHINFWTIDAGGTLYKKQGIFEMIRDKP-------KYVTCLAFTQGGEVLSGDSNGNIIV 474
+ + + + KP + V + G + + +
Sbjct: 110 TQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMD 169
Query: 475 WTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEH 534
G T++ +RN + + VL S + +L + + + A+
Sbjct: 170 VKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQS-PRHEFSMLYTIARFKDDKQDPATADL 228
Query: 535 LGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAG 594
L G +V G T+ + P +
Sbjct: 229 LYGYLSVDLKTGKTHTQEFAD------------------LTELYFTGLRSPKDPNQIYGV 270
Query: 595 FDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETRE 649
+R + +D ++ + ++ F G + +G V + +T E
Sbjct: 271 LNR-LAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 324
Score = 49.0 bits (115), Expect = 1e-06
Identities = 34/335 (10%), Positives = 71/335 (21%), Gaps = 26/335 (7%)
Query: 362 ADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGK 421
G ++ + N N+ V D P D
Sbjct: 5 KAGHEYMIVTNYPN--NLHVVDVASDTVYKSCVMPDKFGPGTAM--MAP-DNRTAYVLNN 59
Query: 422 SHINFWTID-AGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE---VLSGDSNGNIIVWTR 477
+ + + ID + + + + + A + G+ + +
Sbjct: 60 HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 119
Query: 478 GSNTISKF-IRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLG 536
+ F + E + + DG L + +
Sbjct: 120 KPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPD-----IYKMDVKTGK 174
Query: 537 GIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFD 596
+ ++ + +L P+ TA
Sbjct: 175 YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPA-----TADLL 229
Query: 597 RIVQLWDSMSHSVV---WSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI 653
D + ++ D + I R D + R+
Sbjct: 230 YGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKA 287
Query: 654 HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVS 688
+ V F G L LG N + V+
Sbjct: 288 ANLDHTYYCVA-FDKKGDKLYLGGTFNDLAVFNPD 321
Score = 39.3 bits (90), Expect = 0.001
Identities = 22/331 (6%), Positives = 72/331 (21%), Gaps = 52/331 (15%)
Query: 455 LAFTQGGEVL-SGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGS-IISAGGKD 512
A G E + + N+ V S+T+ K + + + +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 513 GRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL 572
G + D + + A ++ G + + +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMY----SFAISPDGKEVYATVNPTQRLNDHY 117
Query: 573 GHTDELWALAAHPSLSQFLT----AGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDG 628
+ + + ++ + + S+ + + T
Sbjct: 118 VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTV 177
Query: 629 SIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQV---VKFSPDGKLLALGSRDNYIYVY 685
++ + + D + + +E + +F D + A
Sbjct: 178 ALPLRNWNRKGYSAPD--VLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 235
Query: 686 EVSGDSRKYS-------------------------------------RVGRCTGHSSFIT 708
++ ++ +
Sbjct: 236 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYY 295
Query: 709 HLDWSEDSMYIRSNSGDYELLYWNAGTCRQI 739
+ + + + +L +N T ++
Sbjct: 296 CVAFDKKGDKLYLGGTFNDLAVFNPDTLEKV 326
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 50.7 bits (119), Expect = 3e-07
Identities = 40/285 (14%), Positives = 82/285 (28%), Gaps = 15/285 (5%)
Query: 450 KYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAG 509
K +T L ++SG +G I+ W+ S + H + S+ K S
Sbjct: 14 KGITALTVNP---LISGSYDGRIMEWSSSS------MHQDHSNLIVSLDNSKAQEYSSIS 64
Query: 510 GKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSP 569
D + + + + + G V LI+ + I+
Sbjct: 65 WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGS 124
Query: 570 VVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGS 629
V + + + Q + + + I+
Sbjct: 125 AVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMG 184
Query: 630 IIIVGCIAGR--WLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEV 687
I++ + R + + + + + L+A GS D I++Y V
Sbjct: 185 KILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSV 244
Query: 688 SGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWN 732
+ + H + +L W S + S+ D + WN
Sbjct: 245 KRPMK---IIKALNAHKDGVNNLLWETPSTLV-SSGADACIKRWN 285
Score = 47.6 bits (111), Expect = 2e-06
Identities = 34/318 (10%), Positives = 83/318 (26%), Gaps = 36/318 (11%)
Query: 288 EEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGI 347
++ + GH I L+++P + +G +D R I W+S S
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISG---SYDGR-----IMEWSSSS-------MH 42
Query: 348 GEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAE 407
+ I L S + + + + + + V+ +
Sbjct: 43 QDHSNLIVSLDNS--KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTND 100
Query: 408 FHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGD 467
L + + + + +L + + V L+ + L
Sbjct: 101 DDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP 160
Query: 468 SNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGY 527
+ + +V + + + + +
Sbjct: 161 LRAKPSYISISPSETYIAAGDVMGKILLYDL------------QSREVKTSRWAFRTSKI 208
Query: 528 EAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL--GHTDELWALAAHP 585
A + E + G+ I + S+ + H D + L
Sbjct: 209 NAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET 268
Query: 586 SLSQFLTAGFDRIVQLWD 603
S +++G D ++ W+
Sbjct: 269 P-STLVSSGADACIKRWN 285
Score = 28.0 bits (60), Expect = 4.8
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 9/41 (21%)
Query: 297 GHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSV 337
H D + L L++ +G DA I+ WN V
Sbjct: 256 AHKDGVNNLLWETPSTLVS----SGADAC-----IKRWNVV 287
Score = 26.8 bits (57), Expect = 9.5
Identities = 37/317 (11%), Positives = 103/317 (32%), Gaps = 50/317 (15%)
Query: 490 HEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQL 549
H + ++ V + + +G DGR++++ S+ + ++ H I ++ + +
Sbjct: 12 HNKGITALTV----NPLISGSYDGRIMEWSSS---SMHQD----HSNLIVSLDNSKAQEY 60
Query: 550 IVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSV 609
+ + + + + +A+ + D + + S + +
Sbjct: 61 SSISWDDTL-------KVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDI 113
Query: 610 VWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPD 669
+ S + + + S + + + + S+ ++ + T + SP
Sbjct: 114 IKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS 173
Query: 670 GKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITH-------LDWSEDSMYIRSN 722
+A G I +Y++ K SR T + I+ + + + +
Sbjct: 174 ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG 233
Query: 723 SGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHD 782
S D + ++ +I I A VN+
Sbjct: 234 SLDTNIFIYSVKRPMKI------------------------IKALNAHKDGVNNLLWETP 269
Query: 783 ARVIATGDDFGKLKLYS 799
+ ++++G D +K ++
Sbjct: 270 STLVSSGAD-ACIKRWN 285
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 51.3 bits (122), Expect = 3e-07
Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 14/127 (11%)
Query: 609 VVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSP 668
+ D+ E S T G I ++D T E ++ G + + S
Sbjct: 24 QMNDWDL-ENLFSVTLRDAGQIA----------LIDGSTYEIKTVLDTGYAV-HISRLSA 71
Query: 669 DGKLLALGSRDNYIYVYEV-SGDSRKYSRVGRCTGHSSFITHLDWSEDSMY-IRSNSGDY 726
G+ L + RD + + ++ + + + + S T + Y I
Sbjct: 72 SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPP 131
Query: 727 ELLYWNA 733
+ + +
Sbjct: 132 QYVIMDG 138
Score = 40.5 bits (94), Expect = 6e-04
Identities = 19/148 (12%), Positives = 43/148 (29%), Gaps = 7/148 (4%)
Query: 590 FLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETRE 649
+T + L D ++ + D + S G + V G+ ++D +E
Sbjct: 35 SVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE 94
Query: 650 AYSIHTD--GNEPIQVV---KFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHS 704
++ G+E + + K G+ + G++ + ++ G +
Sbjct: 95 PTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPP-QYVIMDGETLEPKKIQSTRGMT 153
Query: 705 SFITHLDWSEDSMYIRSNSGDYELLYWN 732
I S N
Sbjct: 154 YDEQEYHPEPRVAAI-LASHYRPEFIVN 180
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 49.9 bits (117), Expect = 5e-07
Identities = 36/295 (12%), Positives = 80/295 (27%), Gaps = 19/295 (6%)
Query: 452 VTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGK 511
L T G+ + + ++ GS T ++ H G ++G
Sbjct: 20 AVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTE-HSHQTTVAKTSPSGYYCASGDV 78
Query: 512 DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLI------VGTTRNCILVGSLNL 565
G + +D+ + I G ++ +S S+ I + L +
Sbjct: 79 HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 138
Query: 566 GFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFS 625
+ + + + + + S ++
Sbjct: 139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYN 198
Query: 626 PDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPI-------QVVKFSPDGKLLALGSR 678
PDGS+ G ++ + + D + + +SPDG +A S
Sbjct: 199 PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 258
Query: 679 DNYIYVYEVSGDSRKYSRVGRCTGHSSF-ITHLDWSEDSMYIRSNSGDYELLYWN 732
D I ++ + + L + S S + + + N
Sbjct: 259 DKTIKIW----NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 42.6 bits (98), Expect = 1e-04
Identities = 18/138 (13%), Positives = 37/138 (26%), Gaps = 3/138 (2%)
Query: 618 QAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGS 677
A +P G I + + I+T+ + V K SP G A G
Sbjct: 19 TAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGD 77
Query: 678 RDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCR 737
+ +++ + + S + + W +S I + E
Sbjct: 78 VHGNVRIWDTTQTTHILKT--TIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT 135
Query: 738 QIPQSSQLRDVVWESNSC 755
+ ++
Sbjct: 136 GTSNGNLTGQARAMNSVD 153
Score = 40.3 bits (92), Expect = 6e-04
Identities = 28/283 (9%), Positives = 61/283 (21%), Gaps = 33/283 (11%)
Query: 270 PTGE-IVYFVAAVAVLYNVEEQTQRH-YLGHTDDIKCLSIHPNKLLIATGQVAG------ 321
P G+ I Y V T Y H+ P+ A+G V G
Sbjct: 27 PAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWD 86
Query: 322 ------------------------HDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISCL 357
+ +
Sbjct: 87 TTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQA 146
Query: 358 SFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIV 417
+ + + + + + V + ++P
Sbjct: 147 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS 206
Query: 418 TCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVL-SGDSNGNIIVWT 476
T G I + G + V L ++ G + S ++ I +W
Sbjct: 207 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 266
Query: 477 RGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFD 519
+ + K I + ++ + + +G + +
Sbjct: 267 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 38.3 bits (87), Expect = 0.003
Identities = 40/299 (13%), Positives = 74/299 (24%), Gaps = 22/299 (7%)
Query: 402 TVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGG 461
T V P + I C + + + + T + G
Sbjct: 19 TAVVLGNTP-AGDKIQYCNGTSVYTVPVGSLTDTEIYTE-------HSHQTTVAKTSPSG 70
Query: 462 EVL-SGDSNGNIIVWT-RGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFD 519
SGD +GN+ +W + I K V G V I E I+A G+
Sbjct: 71 YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 130
Query: 520 SNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFS----------- 568
+ + +V + + + V
Sbjct: 131 FLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK 190
Query: 569 PVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDG 628
V + +L A + + + + T+SPDG
Sbjct: 191 FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 250
Query: 629 SIIIVGCIAGRWLVMDSETRE-AYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYE 686
+ I + + T + +I Q + + L S + +I
Sbjct: 251 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 29.1 bits (63), Expect = 1.9
Identities = 9/58 (15%), Positives = 17/58 (29%), Gaps = 4/58 (6%)
Query: 374 GNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSH-INFWTID 430
D I +W+ I D + + +V+ + INF +
Sbjct: 257 SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK---QALVSISANGFINFVNPE 311
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 49.1 bits (115), Expect = 9e-07
Identities = 18/111 (16%), Positives = 32/111 (28%), Gaps = 10/111 (9%)
Query: 618 QAQSATFSPDGSIIIVGC----IAGRWLVMDSETREAYSIHTDGNEPIQVVKFSP--DGK 671
++ P + I C DS+ G+ + VKFSP +
Sbjct: 19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ 78
Query: 672 LLALGSRDNYIYVYEVSGDSRKYSRVGR----CTGHSSFITHLDWSEDSMY 718
L G + V+ + D S + I+ + W +
Sbjct: 79 YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRR 129
Score = 39.5 bits (90), Expect = 0.001
Identities = 41/310 (13%), Positives = 75/310 (24%), Gaps = 27/310 (8%)
Query: 402 TVVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAF---T 458
+ P N I +D G + F VT + F
Sbjct: 19 FTTHLSYDP-TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSV--VTTVKFSPIK 75
Query: 459 QGGEVLSGDSNGNIIVWTRGSNTIS-------KFIRNVHEGSVFSICVLKEGSIISAGGK 511
+ SGD +G +IVW + S K V G + I EG + G+
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE 135
Query: 512 DGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVV 571
+ +++ H I + + T + V
Sbjct: 136 GRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS 195
Query: 572 L------GHTDELWALAAHPSLSQFLTAGFDRIVQLW-----DSMSHSVVWSKDIAEQAQ 620
+ + P +F+ + ++ +
Sbjct: 196 ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGI 255
Query: 621 SATFSPDGSIIIVGCIAGRWLVMDSETREA---YSIHTDGNEPIQVVKFSPDGKLLALGS 677
A D V D T + +++ QV + + S
Sbjct: 256 FALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS 315
Query: 678 RDNYIYVYEV 687
D + YE+
Sbjct: 316 LDGTLNFYEL 325
Score = 28.3 bits (61), Expect = 4.2
Identities = 6/53 (11%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 331 IRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWD 383
IR+W+ + V + + + + G + D ++ ++
Sbjct: 275 IRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISL---SLDGTLNFYE 324
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 49.1 bits (115), Expect = 1e-06
Identities = 45/288 (15%), Positives = 95/288 (32%), Gaps = 15/288 (5%)
Query: 450 KYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAG 509
K V CL + +++SG + I +W + + + + H GSV + + I +
Sbjct: 16 KGVYCLQYD-DQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQYDERVIITGSS 73
Query: 510 GKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSP 569
R+ ++ L + + ++
Sbjct: 74 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKD-RSIAVWDMASPTDITLRR 132
Query: 570 VVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGS 629
V++GH + ++A DR +++W++ + V + + + A
Sbjct: 133 VLVGHRAAVNV--VDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYRDR 189
Query: 630 IIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSG 689
+++ G + D E + V D K + G+ D I V+++
Sbjct: 190 LVVSGSSDNTIRLWDIECGA--CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 247
Query: 690 DSRKYSRVGRC-----TGHSSFITHLDWSEDSMYIRSNSGDYELLYWN 732
+ G HS + L + D I S+S D +L W+
Sbjct: 248 ALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293
Score = 39.4 bits (90), Expect = 0.001
Identities = 39/317 (12%), Positives = 86/317 (27%), Gaps = 46/317 (14%)
Query: 297 GHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFERSISC 356
+ + CL I +G D I+IW+ +L I + S+ C
Sbjct: 13 ETSKGVYCLQYDDQ--KIVSG---LRDN-----TIKIWDKNTLECKRI--LTGHTGSVLC 60
Query: 357 LSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNI 416
L + + S + D + +
Sbjct: 61 LQYDERV-----------IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMV 109
Query: 417 VTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWT 476
I W + + + + ++S + I VW
Sbjct: 110 TCSKDRSIAVWDMA-----SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 164
Query: 477 RGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLG 536
+ +F+R ++ C+ ++ +G D + +D G ++ E
Sbjct: 165 TSTC---EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE---CGACLRVLEGHE 218
Query: 537 GIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSP----------VVLGHTDELWALAAHPS 586
+ +++ G I V L P ++ H+ ++ L
Sbjct: 219 ELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF 278
Query: 587 LSQFLTAGFDRIVQLWD 603
+++ D + +WD
Sbjct: 279 Q--IVSSSHDDTILIWD 293
Score = 36.7 bits (83), Expect = 0.009
Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Query: 663 VVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSN 722
V D + + G RDN I ++ D TGH+ + L + E + S+
Sbjct: 18 VYCLQYDDQKIVSGLRDNTIKIW----DKNTLECKRILTGHTGSVLCLQYDERVIITGSS 73
Query: 723 SGDYELLYWNAGTCRQ 738
+ N G
Sbjct: 74 DSTVRVWDVNTGEMLN 89
Score = 30.6 bits (67), Expect = 0.63
Identities = 38/243 (15%), Positives = 69/243 (28%), Gaps = 21/243 (8%)
Query: 573 GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIII 632
+ ++ L ++ D +++WD + D +II
Sbjct: 13 ETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKNTLECKRILT-GHTGSVLCLQYDERVII 69
Query: 633 VGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSR 692
G V D T E + E + ++F+ + R ++ D
Sbjct: 70 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 129
Query: 693 KYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWES 752
D YI S SGD + WN TC + + + +
Sbjct: 130 LR-----RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 184
Query: 753 NSCTLTFT------TIGIW-------PEGADGTDVNSCERSHDARVIATGDDFGKLKLYS 799
TI +W +G + D + I +G GK+K++
Sbjct: 185 QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWD 244
Query: 800 YPA 802
A
Sbjct: 245 LVA 247
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 48.2 bits (113), Expect = 2e-06
Identities = 28/296 (9%), Positives = 68/296 (22%), Gaps = 41/296 (13%)
Query: 456 AFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRL 515
A T + G+ + V+ + + I + F + + ++ GK
Sbjct: 64 ASTVFSRIARGERTDYVEVFDPVTLLPTADIEL-PDAPRFLVGTYPWMTSLTPDGKTLLF 122
Query: 516 LQFDSNLQPTGYEAQIAEHLGGIRTVS------EGRGSQLIVGTTRNCILVGSLNLGFSP 569
QF + + + + + + V G
Sbjct: 123 YQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPE 182
Query: 570 VVLGHTDE------LWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSK---------- 613
+ + A + + + + D S +
Sbjct: 183 ITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAER 242
Query: 614 ---DIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVK----- 665
Q + I + + +R + E + +
Sbjct: 243 ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEI 302
Query: 666 ----FSPDGK--LLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSED 715
S D K L AL + D +Y++ D+ + + ++
Sbjct: 303 DSINVSQDEKPLLYALSTGDKTLYIH----DAESGEELRSVNQLGHGPQVITTADM 354
Score = 39.4 bits (90), Expect = 0.001
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 4/104 (3%)
Query: 570 VVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGS 629
V H ++ R V + D+ + + ++ + S S D
Sbjct: 253 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEK 312
Query: 630 --IIIVGCIAGRWLVMDSET-REAYSIHTDGNEPIQVVKFSPDG 670
+ + + D+E+ E S++ G+ P QV+ + G
Sbjct: 313 PLLYALSTGDKTLYIHDAESGEELRSVNQLGHGP-QVITTADMG 355
Score = 30.1 bits (66), Expect = 0.94
Identities = 13/109 (11%), Positives = 30/109 (27%), Gaps = 14/109 (12%)
Query: 658 NEPIQVVKFSPDGKLL-----ALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDW 712
+EP + +PD + + A + +V D +G G F+ +
Sbjct: 1 DEPRILEAPAPDARRVYVNDPAHFAAVTQQFVI----DGEAGRVIGMIDGG--FLPNPVV 54
Query: 713 SEDS--MYIRSNSGDYELLYWNAGTCRQI-PQSSQLRDVVWESNSCTLT 758
++D + S P + + ++
Sbjct: 55 ADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL 103
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 48.1 bits (112), Expect = 2e-06
Identities = 33/312 (10%), Positives = 74/312 (23%), Gaps = 20/312 (6%)
Query: 292 QRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVSIIGIGEFE 351
+ GH I LS + + + + HI W+ + + +
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSA---DAEG-----HINSWDISTGISNRVFPDVH-A 55
Query: 352 RSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPL 411
I+ + + D ++ V S +
Sbjct: 56 TMITGIKTTS-----KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSAD 110
Query: 412 DRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGN 471
+ C K + + + ++V V
Sbjct: 111 GDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV 170
Query: 472 IIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQI 531
V T + + G+ I + + L +S T A +
Sbjct: 171 SEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACV 230
Query: 532 AEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFL 591
+ +R + + +IV + G H + + +
Sbjct: 231 SWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKG------AHAMSSVNSVIWLNETTIV 284
Query: 592 TAGFDRIVQLWD 603
+AG D ++ W+
Sbjct: 285 SAGQDSNIKFWN 296
Score = 42.7 bits (98), Expect = 1e-04
Identities = 17/103 (16%), Positives = 31/103 (30%), Gaps = 7/103 (6%)
Query: 654 HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWS 713
H I + S DGK L + +I +++S H++ IT +
Sbjct: 11 HNK---AITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPD---VHATMITGIKT- 63
Query: 714 EDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCT 756
+ + S D L AG + + +
Sbjct: 64 TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 106
Score = 35.7 bits (80), Expect = 0.017
Identities = 37/314 (11%), Positives = 93/314 (29%), Gaps = 28/314 (8%)
Query: 490 HEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQI--AEHLGGIRTVSEGRGS 547
H ++ ++ +G + + +G + +D + TG ++ H I +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDIS---TGISNRVFPDVHATMITGIKTTSKG 67
Query: 548 QLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSH 607
L + + + V ++L + ++S + SH
Sbjct: 68 DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSH 127
Query: 608 SVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFS 667
+ I+ + S D + VG + V + T +
Sbjct: 128 GKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAF 187
Query: 668 PDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYE 727
+ + + + + ++ + + T H++ + + WS D++ + + S D
Sbjct: 188 SNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNS 247
Query: 728 LLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARVIA 787
++ WN P I +GA + + I
Sbjct: 248 VIVWNMNKPSDHP-----------------------IIIKGAHAMSSVNSVIWLNETTIV 284
Query: 788 TGDDFGKLKLYSYP 801
+ +K ++ P
Sbjct: 285 SAGQDSNIKFWNVP 298
Score = 33.0 bits (73), Expect = 0.13
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 702 GHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQI 739
GH+ IT L S D + S + + W+ T
Sbjct: 10 GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISN 47
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 43.4 bits (101), Expect = 7e-05
Identities = 17/211 (8%), Positives = 42/211 (19%), Gaps = 28/211 (13%)
Query: 559 LVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQ 618
+G F + + A S ++ V+++D ++ + ++ +
Sbjct: 58 TLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA 117
Query: 619 AQSATFSPDGSIIIVGCIAGRWL-VMDSETREAYSIHTDGNEPIQV-------------- 663
+ + I + L + A + G Q+
Sbjct: 118 PRFSVGPRVHIIGNCA--SSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAA 175
Query: 664 ---VKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIR 720
S L A V + + M +
Sbjct: 176 ATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG--------AQNCSSQAAQANYPGMLVW 227
Query: 721 SNSGDYELLYWNAGTCRQIPQSSQLRDVVWE 751
+ + A
Sbjct: 228 AVASSILQGDIPAAGATMKAAIDGNESGRKA 258
Score = 31.5 bits (70), Expect = 0.40
Identities = 18/270 (6%), Positives = 48/270 (17%), Gaps = 39/270 (14%)
Query: 423 HINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVL--SGDSNGNIIVWTRGSN 480
++ + + + V + L + +
Sbjct: 97 YVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGA 156
Query: 481 TISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGI-- 538
+ + ++ + + G L D P A+ G
Sbjct: 157 SDDQLTKSASCFHIHP----GAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNC 212
Query: 539 -----------RTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVL---GHTDELWALAAH 584
V S L + + G + +A
Sbjct: 213 SSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL 272
Query: 585 PSLSQFLTAGFDRI---------VQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGC 635
+ + + + + + + DG
Sbjct: 273 KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDG------- 325
Query: 636 IAGRWLVMDSETREAYSIHTDGNEPIQVVK 665
A + T ++ V+
Sbjct: 326 -ASDNYANSAGTEVLDIYDAASDQDQSSVE 354
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 41.8 bits (96), Expect = 2e-04
Identities = 21/196 (10%), Positives = 56/196 (28%), Gaps = 3/196 (1%)
Query: 573 GHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWS-KDIAEQAQSATFSPDGSII 631
GH + + +T D++++++DS++ + + ++ G ++
Sbjct: 10 GHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILV 68
Query: 632 IVG-CIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGD 690
R + + + + K + GSRDN ++V+++ +
Sbjct: 69 SGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 128
Query: 691 SRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVW 750
S F T + +R + + + + L
Sbjct: 129 SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDV 188
Query: 751 ESNSCTLTFTTIGIWP 766
C +
Sbjct: 189 AQMKCLYILSGHTDRI 204
Score = 39.5 bits (90), Expect = 0.001
Identities = 47/378 (12%), Positives = 117/378 (30%), Gaps = 43/378 (11%)
Query: 354 ISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDR 413
I+CL F + + +D I V+D + + V A ++
Sbjct: 16 ITCLQF---EDNYVITG---ADDKMIRVYDSIN---KKFLLQLSGHDGGVWALKYAH--G 64
Query: 414 NNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNII 473
+V+ +FE + + + + +++G + +
Sbjct: 65 GILVSGSTDRTVRVWDIKK---GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 121
Query: 474 VWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAE 533
VW + KE S+ G + L F + + + +
Sbjct: 122 VWK----------------------LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 159
Query: 534 HLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTA 593
H+ +RTVS + I+ + ++ GHTD +++ + ++A
Sbjct: 160 HMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISA 219
Query: 594 GFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI 653
D +++WD + ++++ D ++ ++ +S
Sbjct: 220 SMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSY 279
Query: 654 HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWS 713
H + F +L GS +N +Y + ++ + + I +++
Sbjct: 280 HHTN--LSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANI---LKDADQIWSVNFK 333
Query: 714 EDSMYIRSNSGDYELLYW 731
++ + D +
Sbjct: 334 GKTLVA-AVEKDGQSFLE 350
Score = 37.2 bits (84), Expect = 0.007
Identities = 24/233 (10%), Positives = 60/233 (25%), Gaps = 8/233 (3%)
Query: 284 LYNVEEQTQRHYLGHTDDIKCLSIHPNKLLIATGQVAGHDAREGKPHIRIWNSVSLFTVS 343
++ + +++ G D + P + G + GH A VS +
Sbjct: 122 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN 181
Query: 344 IIGIGEFERSISCLSFSKADGGTFLCAVDEGNDY-NISVWDWQKSDRGHKITETKCSVDT 402
+ + + + S + D + D + E ++
Sbjct: 182 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 241
Query: 403 VVAAEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGE 462
A + + + + + F
Sbjct: 242 HTALVGLLRLSDKFLVSAAADGSIRGW------DANDYSRKFSYHHTNLSAITTFYVSDN 295
Query: 463 VLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRL 515
+L S ++ S + ++S+ K ++++A KDG+
Sbjct: 296 ILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVN-FKGKTLVAAVEKDGQS 347
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 39.4 bits (90), Expect = 0.001
Identities = 37/332 (11%), Positives = 77/332 (23%), Gaps = 25/332 (7%)
Query: 371 VDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKSH--INFWT 428
+ I VW+ + +T+ V P D+ + + + +
Sbjct: 8 IASPESQQIHVWNLN-HEGALTLTQVVDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYR 65
Query: 429 IDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRN 488
I F P +T ++ D G + + R
Sbjct: 66 IAPDDGALT----FAAESALPGSLTHIST---------DHQGQFVFVGSYNAGNVSVTRL 112
Query: 489 VHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGIRTVSEGRGSQ 548
V + V++ + G +
Sbjct: 113 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVT 172
Query: 549 LIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHS 608
+ G ++ V ++ P + D + + + +
Sbjct: 173 TVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWA 232
Query: 609 VVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSP 668
+ A I + + D +P
Sbjct: 233 ADIHITPDGRHLYACDRTASLITV------FSVSEDGSVLSKEGFQPTETQPRGFN-VDH 285
Query: 669 DGK-LLALGSRDNYIYVYEVSGDSRKYSRVGR 699
GK L+A G + ++I VYE+ G+ GR
Sbjct: 286 SGKYLIAAGQKSHHISVYEIVGEQGLLHEKGR 317
Score = 29.8 bits (65), Expect = 1.3
Identities = 6/80 (7%), Positives = 21/80 (26%), Gaps = 3/80 (3%)
Query: 331 IRIWNSVSLFTVSIIGIGEFERSISCLSFSKADGGTFLCAVDEGNDYNISVWDWQKSDRG 390
I +WN +++ + + + + S +L ++ + + D
Sbjct: 16 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPD--KRYLYVGVRP-EFRVLAYRIAPDDGA 72
Query: 391 HKITETKCSVDTVVAAEFHP 410
++
Sbjct: 73 LTFAAESALPGSLTHISTDH 92
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 38.0 bits (87), Expect = 0.003
Identities = 28/272 (10%), Positives = 61/272 (22%), Gaps = 18/272 (6%)
Query: 305 LSIHPNKLLIATGQVAGHDAREGKPH--IRIWNSVSLFTVSIIGIGEFERSISCLSFSKA 362
+I P++ G + I ++ +L I I ++ A
Sbjct: 22 FAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTA 81
Query: 363 DGGTFLCAVDEGNDYNISVWDWQKSDRGHKITETKCSVDTVVAAEFHPLDRNNIVTCGKS 422
SV + + +DT +P + +S
Sbjct: 82 FSADGKRLYVANITPAASVTVIDAVSK-----KMLSEIDTAACVLAYPAGDDRFTALCES 136
Query: 423 HINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQG---GEVLSGDSNGNIIVWTRGS 479
K+ + + G+ L GN+
Sbjct: 137 GKALTVTLDANGKEAKRTMSDA--FIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSG 194
Query: 480 NTISKFIR-NVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPTGYEAQIAEHLGGI 538
+ + ++ + + G +A + G + G
Sbjct: 195 DKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSH----KDPGTQ 250
Query: 539 RTVSEGRGSQLIVGTTRNCILVGSLN-LGFSP 569
V + + Q + V L + S
Sbjct: 251 VWVYDLKSKQRVARWDLAQQKVEPLVSIQVSE 282
Score = 33.8 bits (76), Expect = 0.076
Identities = 27/273 (9%), Positives = 63/273 (23%), Gaps = 54/273 (19%)
Query: 456 AFTQGGEVLSGDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRL 515
A T G + + + + I + + +A DG+
Sbjct: 34 ATTYFSRGSHGTRTDVVEIIDNTTLDHAGEI-VIPAKHAQHV----PSPYNTAFSADGKR 88
Query: 516 LQFDSNLQPTGYEAQIAEHLGGIRTVSEGR----------GSQLIVGTTRNCILVGSLNL 565
L T + + +SE G + +
Sbjct: 89 L---YVANITPAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTVTLD 145
Query: 566 GFSPVVLGHT----DELWALAAHPSLSQF----LTAGFDRIVQLWDSMSHSVVWSKDIAE 617
++ A + S++ L + V+ D + K +
Sbjct: 146 ANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSL 205
Query: 618 QA-------------QSATFSPDGSIIIVGCIAG----------RWLVMDSETREAYSIH 654
Q + V G + V D ++++ +
Sbjct: 206 LTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARW 265
Query: 655 TDGNEPIQVVK---FSPDGK--LLALGSRDNYI 682
+ ++ + S D K L + + +
Sbjct: 266 DLAQQKVEPLVSIQVSEDDKPLFYGLTATSDLV 298
Score = 32.3 bits (72), Expect = 0.19
Identities = 15/207 (7%), Positives = 40/207 (19%), Gaps = 21/207 (10%)
Query: 601 LWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEP 660
++D+ + ++ D +PD +V + T I +
Sbjct: 2 VYDADAKKLLGQIDGG-FGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDH 60
Query: 661 IQVVK-------------FSPDGKL-LALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSF 706
+ + L + D+ + +
Sbjct: 61 AGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACV 120
Query: 707 ITHLDWSEDSMYIRSNSGDYE-LLYWNA--GTCRQIPQSSQLRDVVWESNSCTLTFTTIG 763
+ + + + L G + S DV + +
Sbjct: 121 LAYPA---GDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGD 177
Query: 764 IWPEGADGTDVNSCERSHDARVIATGD 790
G ++
Sbjct: 178 YLFTTYGGNVRSADFSGDKPAFGKPWS 204
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 36.0 bits (81), Expect = 0.015
Identities = 11/123 (8%), Positives = 36/123 (29%), Gaps = 8/123 (6%)
Query: 594 GFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI 653
G ++ ++ + + + ++ + S +++V G+ + +
Sbjct: 149 GRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 208
Query: 654 HTDGNEPIQVVKFSPDGKLLALGSRDN---YIYVYEVSGDSRKYSRVGRCTGHSSFITHL 710
+ +P+G ++ S + + G + R +
Sbjct: 209 VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA-----RLPATDGQVKFP 263
Query: 711 DWS 713
WS
Sbjct: 264 AWS 266
Score = 31.4 bits (69), Expect = 0.39
Identities = 17/114 (14%), Positives = 32/114 (28%), Gaps = 1/114 (0%)
Query: 642 VMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCT 701
V D + + + +P+ +SPDG LA + ++ + + R
Sbjct: 23 VSDYDGYNQFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF 81
Query: 702 GHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSC 755
+ + + LY QI Q + R E
Sbjct: 82 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWF 135
Score = 29.1 bits (63), Expect = 2.2
Identities = 30/207 (14%), Positives = 51/207 (24%), Gaps = 5/207 (2%)
Query: 592 TAGFDRIVQLW--DSMSHSVVWSKDIAEQAQSATFSPDGSIIIV--GCIAGRWLVMDSET 647
T G +L D ++ + S +SPDGS + LV+ +
Sbjct: 12 TNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA 71
Query: 648 REAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFI 707
A FSPDG LA V + R ++
Sbjct: 72 NGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTE 131
Query: 708 THLDWSEDSMYIRS-NSGDYELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWP 766
++ S +G ++ N + + S F +
Sbjct: 132 PTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSN 191
Query: 767 EGADGTDVNSCERSHDARVIATGDDFG 793
G + +T D
Sbjct: 192 GGQQHIAKQDLATGGVQVLSSTFLDET 218
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 35.7 bits (82), Expect = 0.020
Identities = 13/125 (10%), Positives = 29/125 (23%), Gaps = 7/125 (5%)
Query: 602 WDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCI-AGRWLVMDSETREAYSIHTDGNEP 660
D+ + V W + + G C + R + + R N
Sbjct: 161 IDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVE 220
Query: 661 IQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIR 720
G +G + + +Y V + + + +I
Sbjct: 221 RI-AAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNT-----SPDGKYFIA 274
Query: 721 SNSGD 725
+
Sbjct: 275 NGKLS 279
Score = 31.0 bits (70), Expect = 0.57
Identities = 28/237 (11%), Positives = 60/237 (25%), Gaps = 37/237 (15%)
Query: 406 AEFHPLDRNNIVTCGKSHINFWTIDAGGTLYKKQGIFEMIRDKPKYVTCLAFTQGGEVLS 465
+ + TC S +F + R A + G +
Sbjct: 181 TDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERI-------AAAVKAGNFKT 233
Query: 466 GDSNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEGSIISAGGKDGRLLQFDSNLQPT 525
+ +V RG + +++I V + I+ G +
Sbjct: 234 IGDSKVPVVDGRGESEFTRYIP-VPKNPHGLNTSPDGKYFIANGKLSPTVSVIAI----D 288
Query: 526 GYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGSLNLGFSPVVLGHTDELWALAAHP 585
+ + + T+ V LG P+ A
Sbjct: 289 KLDDLFEDKIELRDTI------------------VAEPELGLGPLHTTFDGRGNAYTTLF 330
Query: 586 SLSQFLTAGFDRIVQLWDSMSHSVVWSK-DIAEQ------AQSATFSPDGSIIIVGC 635
SQ ++ ++ + + K D+ Q + + + DG ++V
Sbjct: 331 IDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLS 387
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 34.8 bits (78), Expect = 0.029
Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 590 FLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIA-GRWLVMDSETR 648
++ + + D S+ V + + A SPDG+ + V ++D+ T
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 649 EAYSIH 654
+
Sbjct: 65 NVIATV 70
Score = 32.9 bits (73), Expect = 0.15
Identities = 10/78 (12%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 642 VMDSETREAYSIHTDGNEPIQVVKFSPDGK-LLALGSRDNYIYVYEVSGDSRKYSRVGRC 700
V+D + + + G+ P+ V SPDG + + N + + + + ++ +
Sbjct: 16 VIDVTSNKVTATIPVGSNPMGAV-ISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS 74
Query: 701 TGHSSFITHLDWSEDSMY 718
+ ++
Sbjct: 75 SPQGVAVSPDGKQVYVTN 92
Score = 30.2 bits (66), Expect = 0.93
Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 640 WLVMDSETREAYSIHTDGNEPIQVVKFSPDGK-LLALGSRDNYIYVYEV-SGDSRKYSRV 697
++D+ T + + G +P + +PDGK + S N + V + + V
Sbjct: 226 VSMIDTGTNKITARIPVGPDPAGIA-VTPDGKKVYVALSFCNTVSVIDTATNTITATMAV 284
Query: 698 GRC-TGHSSFITHLD 711
G+ FI +
Sbjct: 285 GKNPYASGQFIGSIP 299
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 32.8 bits (73), Expect = 0.15
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 642 VMDSETREAYSIHTDGNEPIQVVKFSPDGKLLAL----GSRDNYIYVYEVSGDSRKYSRV 697
D ++ I I +F PDG+ +A+ GS N +Y +G++ + R+
Sbjct: 25 EHDLKSGSTRKI-VSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI 83
Query: 698 ----GRCTGHSSFITHLDWSEDSMYI 719
G+ TG F + D I
Sbjct: 84 TYFSGKSTGRRMFTDVAGFDPDGNLI 109
Score = 30.1 bits (66), Expect = 0.96
Identities = 15/124 (12%), Positives = 36/124 (29%), Gaps = 13/124 (10%)
Query: 594 GFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI 653
G + + + + I G+ D + ++
Sbjct: 170 GTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKH 229
Query: 654 HTDGNEPIQVVKFSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWS 713
+ + + DG+ + S+ IY++ D+ K ++ I L+
Sbjct: 230 TSFTDYY--PRHLNTDGRRILF-SKGGSIYIFNP--DTEKIEKIE--------IGDLESP 276
Query: 714 EDSM 717
ED +
Sbjct: 277 EDRI 280
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 32.6 bits (73), Expect = 0.17
Identities = 16/136 (11%), Positives = 37/136 (27%), Gaps = 11/136 (8%)
Query: 610 VWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI---HTDGNEPIQVVKF 666
++S+D A + D I G + + ET + + + +
Sbjct: 10 LFSEDFKIHDPEAKWISDTEFIYRE-QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEI 68
Query: 667 SPDGKLLALGSRDNYIYVYEVSGD-------SRKYSRVGRCTGHSSFITHLDWSEDSMYI 719
SPD + IY + +G + ++ + + W +
Sbjct: 69 SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQL 128
Query: 720 RSNSGDYELLYWNAGT 735
+ + G
Sbjct: 129 IFIFENNIYYCAHVGK 144
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 31.6 bits (70), Expect = 0.37
Identities = 14/134 (10%), Positives = 33/134 (24%), Gaps = 11/134 (8%)
Query: 610 VWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSETREAYSI-----HTDGNEPIQVV 664
+ S + D + LV ++E + + I
Sbjct: 10 YLKNTYRLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDY 67
Query: 665 KFSPDGKLLALGSRDNYIYVYEVSGDSRKYS----RVGRCTGHSSFITHLDWSEDSMYIR 720
SPDG+ + L + + + Y ++ + + WS +
Sbjct: 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLA 127
Query: 721 SNSGDYELLYWNAG 734
+ +
Sbjct: 128 YVWNNDIYVKIEPN 141
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain
{Soybean (Glycine max), isozyme L1 [TaxId: 3847]}
Length = 690
Score = 29.9 bits (67), Expect = 1.3
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 141 DSPSSSSVSPVPSSPRPLPPKTSWTSNL-HTSKRWSSTGDFHHHTMSSH 188
P S+ S LP K S + +K + D +H + SH
Sbjct: 302 SLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSH 350
>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein
adap) {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 27.4 bits (61), Expect = 1.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 659 EPIQVVKFSPDGKLLALGSRDNYIYV 684
E ++V++ + D K+L Y YV
Sbjct: 45 ESLEVIQTTDDTKVLCRNEEGKYGYV 70
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 29.3 bits (64), Expect = 1.6
Identities = 29/232 (12%), Positives = 63/232 (27%), Gaps = 6/232 (2%)
Query: 445 IRDKPKYVTCLAFTQGGEVLSGD-SNGNIIVWTRGSNTISKFIRNVHEGSVFSICVLKEG 503
I K + L F + G++ D GNI + I + + H+ + +I + K+G
Sbjct: 35 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS-HKANPAAIKIHKDG 93
Query: 504 SIISAGGKDGRLLQFDSNLQP-TGYEAQIAEHLGGIRTVSEGRGSQLIVGTTRNCILVGS 562
+ D + I E L + + + +
Sbjct: 94 RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYST 153
Query: 563 LNLGFSPVVLGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSA 622
LG V + + + S++ + D V + + + + + +
Sbjct: 154 NPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTI 213
Query: 623 TFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLA 674
G Y +V+ F+ G +
Sbjct: 214 QPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG---RVLVFNKRGYPIG 262
>d2v8qa1 d.129.6.2 (A:396-548) 5'-AMP-activated protein kinase
catalytic subunit alpha-1, AMPK1 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 153
Score = 28.4 bits (63), Expect = 2.2
Identities = 12/66 (18%), Positives = 18/66 (27%), Gaps = 7/66 (10%)
Query: 120 TPSSLPQRRGVHYQSTGSLHSDSPSSSSVSPVPSSPRPLPPKTSWTSNLHTSKRWSSTGD 179
+ ++ PQR G SDS + + P S S
Sbjct: 80 SGTATPQRSGSISNYRSCQRSDSDAEAQGKPSEVSLTSSVTSLD-------SSPVDVAPR 132
Query: 180 FHHHTM 185
HT+
Sbjct: 133 PGSHTI 138
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 28.9 bits (63), Expect = 2.8
Identities = 16/148 (10%), Positives = 35/148 (23%), Gaps = 10/148 (6%)
Query: 623 TFSPDGSIIIVGCIAGRWLVMDSETREAYSIHTDGNEPIQVVKFSPDGKLLALGSRDNYI 682
+PDG+I + G + + + IH + + F+ +G L+A G + I
Sbjct: 34 ASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSI 91
Query: 683 YVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGDYELLYWNAGTCRQIPQS 742
V + + S+ +
Sbjct: 92 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTAD--------SYRGAIWLIDVVQ 143
Query: 743 SQLRDVVWESNSCTLTFTTIGIWPEGAD 770
+ ++ G
Sbjct: 144 PSGSIWLEHPMLARSNSESVFPAANGLK 171
Score = 28.1 bits (61), Expect = 4.8
Identities = 10/125 (8%), Positives = 29/125 (23%), Gaps = 6/125 (4%)
Query: 666 FSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHSSFITHLDWSEDSMYIRSNSGD 725
+PDG + I G+ + + ++ L ++ + + +
Sbjct: 35 SAPDGTIFVTNHEVGEIVSITPDGNQQIH------ATVEGKVSGLAFTSNGDLVATGWNA 88
Query: 726 YELLYWNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCERSHDARV 785
+ + ++ N T T + + G +
Sbjct: 89 DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSI 148
Query: 786 IATGD 790
Sbjct: 149 WLEHP 153
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Length = 325
Score = 28.6 bits (63), Expect = 3.2
Identities = 8/39 (20%), Positives = 14/39 (35%)
Query: 666 FSPDGKLLALGSRDNYIYVYEVSGDSRKYSRVGRCTGHS 704
D L L S +N +Y ++ R + R +
Sbjct: 22 IRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWT 60
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 88
Score = 26.4 bits (58), Expect = 3.9
Identities = 6/36 (16%), Positives = 13/36 (36%)
Query: 28 ERVSDLEKKVLEHGDEIVCLRSTLADVLRRLAQLES 63
+ ++ + + E LR + +L QL
Sbjct: 52 AYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLGG 87
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain
{Methylobacterium extorquens [TaxId: 408]}
Length = 596
Score = 28.4 bits (62), Expect = 4.2
Identities = 10/71 (14%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 602 WDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSET-REAYSIHTDGNEP 660
+++++ W K T + G ++ G + G DS+T +
Sbjct: 458 YNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAI 517
Query: 661 IQVVKFSPDGK 671
+ ++ G
Sbjct: 518 GYPMTYTHKGT 528
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 582
Score = 28.0 bits (61), Expect = 5.1
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 602 WDSMSHSVVWSKDIAEQAQSATFSPDGSIIIVGCIAGRWLVMDSET-REAYSIHTDGNEP 660
D +S VVW + + G+++ G G + D+++ +E + T
Sbjct: 471 MDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIV 530
Query: 661 IQVVKFSPDGK 671
+ + DG+
Sbjct: 531 SPPITWEQDGE 541
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 27.6 bits (61), Expect = 5.9
Identities = 13/81 (16%), Positives = 24/81 (29%), Gaps = 1/81 (1%)
Query: 572 LGHTDELWALAAHPSLSQFLTAGFDRIVQLWDSMSHSVVWSKDIAEQAQSATFSPDGSII 631
D A L+ +++ ++ A Q+ DG II
Sbjct: 87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHII 146
Query: 632 IVGCIAGRWLVMDSETREAYS 652
+ ++G V+ YS
Sbjct: 147 NINSMSG-HRVLPLSVTHFYS 166
>d1itwa_ c.77.1.2 (A:) Monomeric isocitrate dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 740
Score = 27.8 bits (62), Expect = 6.6
Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 19/74 (25%)
Query: 146 SSVSPV---PSSPR--PLPPKTSWTSNLHTSKRWS----------STGDFHH----HTMS 186
S+V+PV +S R PL K + H WS GDF+ +
Sbjct: 131 SAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWSADSKSHVAHMDNGDFYGSEKAALIG 190
Query: 187 SHHSVHQNHHNSSG 200
+ SV G
Sbjct: 191 APGSVKIELIAKDG 204
>d1iyba_ d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxId:
35889]}
Length = 208
Score = 27.0 bits (59), Expect = 8.5
Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 9/80 (11%)
Query: 723 SGDYELLY----WNAGTCRQIPQSSQLRDVVWESNSCTLTFTTIGIWPEGADGTDVNSCE 778
+ D++ Y W C + S+ F G+WP DG+ ++C+
Sbjct: 5 AQDFDFFYFVQQWPGSYCDTKQSCCYPKTGKPASD-----FGIHGLWPNNNDGSYPSNCD 59
Query: 779 RSHDARVIATGDDFGKLKLY 798
+ D +++
Sbjct: 60 SNSPYDQSQVSDLISRMQQN 79
>d2hwja1 d.268.1.3 (A:4-204) Hypothetical protein Atu1540
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 201
Score = 26.6 bits (59), Expect = 8.9
Identities = 10/49 (20%), Positives = 16/49 (32%), Gaps = 4/49 (8%)
Query: 569 PVVLGHTDELWALAAHPSLSQFLTAGFD----RIVQLWDSMSHSVVWSK 613
PVV G D + + H + G + V + + WS
Sbjct: 51 PVVAGPKDRAYLIDHHHLVLALSKEGVEHVLTSEVAKFSHLGKDEFWSV 99
>d1jy5a_ d.124.1.1 (A:) RNase-related protein {Hedge bindweed
(Calystegia sepium) [TaxId: 47519]}
Length = 207
Score = 26.7 bits (58), Expect = 8.9
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 12/58 (20%)
Query: 729 LYWNAGTCRQIPQSSQLRDVVWESNSCT-----LTFTTIGIWPEGADGTDVNSCERSH 781
L W+ C + S +N+C+ FT G+WP+ DGT + CE +
Sbjct: 11 LTWSGTECLSVKDSCP-------TNACSRSEVETGFTIKGLWPDYDDGTWPSCCEGAK 61
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.133 0.403
Gapped
Lambda K H
0.267 0.0582 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,056,973
Number of extensions: 143516
Number of successful extensions: 749
Number of sequences better than 10.0: 1
Number of HSP's gapped: 582
Number of HSP's successfully gapped: 156
Length of query: 811
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 718
Effective length of database: 1,130,706
Effective search space: 811846908
Effective search space used: 811846908
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.1 bits)