Query psy9773
Match_columns 252
No_of_seqs 192 out of 1918
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 19:14:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9773.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9773hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hc4_A Protein arginine N-meth 99.9 6.2E-27 2.1E-31 215.2 12.0 162 10-181 44-228 (376)
2 3q7e_A Protein arginine N-meth 99.9 1.3E-22 4.4E-27 184.5 11.0 168 7-184 24-213 (349)
3 3r0q_C Probable protein argini 99.9 1.8E-21 6.1E-26 178.7 15.7 165 8-182 22-220 (376)
4 1g6q_1 HnRNP arginine N-methyl 99.9 9.7E-22 3.3E-26 177.3 10.1 162 13-184 2-185 (328)
5 2fyt_A Protein arginine N-meth 99.8 8E-21 2.7E-25 172.2 14.0 164 11-184 26-211 (340)
6 2y1w_A Histone-arginine methyl 99.8 7E-19 2.4E-23 159.7 14.8 161 9-180 10-196 (348)
7 3g5l_A Putative S-adenosylmeth 99.7 1.3E-16 4.5E-21 137.0 10.0 132 1-150 1-147 (253)
8 3b3j_A Histone-arginine methyl 99.7 1.7E-16 5.7E-21 150.2 11.4 157 13-180 122-304 (480)
9 3f4k_A Putative methyltransfer 99.6 9.8E-15 3.4E-19 125.2 13.7 100 37-150 34-152 (257)
10 3kkz_A Uncharacterized protein 99.6 1.1E-14 3.8E-19 126.1 13.5 100 37-150 34-152 (267)
11 2p7i_A Hypothetical protein; p 99.6 9.1E-15 3.1E-19 123.8 10.5 90 47-150 40-143 (250)
12 3ofk_A Nodulation protein S; N 99.6 8.3E-15 2.8E-19 122.6 10.1 103 36-149 38-155 (216)
13 3dtn_A Putative methyltransfer 99.6 2.2E-14 7.4E-19 121.5 12.1 95 45-150 40-150 (234)
14 3bkw_A MLL3908 protein, S-aden 99.6 1.5E-14 5.1E-19 122.7 10.5 93 45-150 39-146 (243)
15 4hg2_A Methyltransferase type 99.5 1.7E-14 5.8E-19 125.9 9.9 88 48-150 38-137 (257)
16 4gqb_A Protein arginine N-meth 99.5 6.3E-15 2.2E-19 143.0 7.8 124 27-161 327-480 (637)
17 4gek_A TRNA (CMO5U34)-methyltr 99.5 1.5E-14 5.2E-19 126.4 9.3 93 46-150 67-180 (261)
18 3dlc_A Putative S-adenosyl-L-m 99.5 2.2E-14 7.6E-19 119.2 9.6 90 46-149 41-149 (219)
19 2a14_A Indolethylamine N-methy 99.5 6.9E-15 2.4E-19 127.9 6.5 93 46-148 52-197 (263)
20 3thr_A Glycine N-methyltransfe 99.5 7.5E-15 2.6E-19 128.6 6.5 106 34-150 42-177 (293)
21 1nkv_A Hypothetical protein YJ 99.5 5.2E-14 1.8E-18 120.6 10.9 97 41-150 28-142 (256)
22 1y8c_A S-adenosylmethionine-de 99.5 4.6E-14 1.6E-18 119.6 9.9 92 48-150 36-144 (246)
23 3dli_A Methyltransferase; PSI- 99.5 2.1E-14 7.1E-19 122.5 7.8 94 45-150 37-142 (240)
24 3ou2_A SAM-dependent methyltra 99.5 5.8E-14 2E-18 117.0 10.0 94 45-150 42-148 (218)
25 3pfg_A N-methyltransferase; N, 99.5 7.5E-14 2.6E-18 120.5 10.9 91 47-148 48-151 (263)
26 3mgg_A Methyltransferase; NYSG 99.5 6.4E-14 2.2E-18 121.6 10.5 103 35-150 23-144 (276)
27 1vl5_A Unknown conserved prote 99.5 6E-14 2E-18 120.9 10.2 90 46-149 34-141 (260)
28 3bus_A REBM, methyltransferase 99.5 1.2E-13 4.2E-18 119.5 11.9 101 37-150 49-168 (273)
29 1xtp_A LMAJ004091AAA; SGPP, st 99.5 1E-13 3.4E-18 118.4 11.1 100 39-149 83-198 (254)
30 3l8d_A Methyltransferase; stru 99.5 3.7E-14 1.3E-18 120.4 7.7 89 47-149 51-154 (242)
31 3d2l_A SAM-dependent methyltra 99.5 9.3E-14 3.2E-18 117.7 10.1 92 47-150 31-139 (243)
32 3e23_A Uncharacterized protein 99.5 3.4E-14 1.2E-18 118.5 7.1 93 46-150 40-143 (211)
33 2pxx_A Uncharacterized protein 99.5 3.1E-14 1.1E-18 118.2 6.8 103 36-150 31-161 (215)
34 2yqz_A Hypothetical protein TT 99.5 3E-13 1E-17 115.9 13.2 100 34-147 23-140 (263)
35 1wzn_A SAM-dependent methyltra 99.5 2.1E-13 7.2E-18 116.6 12.0 94 46-150 38-147 (252)
36 3ujc_A Phosphoethanolamine N-m 99.5 1.5E-13 5.2E-18 117.8 11.0 102 38-150 44-161 (266)
37 3vc1_A Geranyl diphosphate 2-C 99.5 4E-13 1.4E-17 119.3 14.1 96 40-150 107-223 (312)
38 3jwg_A HEN1, methyltransferase 99.5 2.4E-13 8.2E-18 114.0 11.8 92 48-150 28-143 (219)
39 1ri5_A MRNA capping enzyme; me 99.5 1.6E-13 5.4E-18 119.8 10.6 94 47-150 62-176 (298)
40 3hem_A Cyclopropane-fatty-acyl 99.5 4.4E-13 1.5E-17 118.2 13.4 99 39-150 62-185 (302)
41 3gu3_A Methyltransferase; alph 99.5 4.4E-13 1.5E-17 117.5 12.5 93 45-150 18-128 (284)
42 1pjz_A Thiopurine S-methyltran 99.5 1E-13 3.4E-18 116.1 7.9 89 47-147 20-139 (203)
43 2o57_A Putative sarcosine dime 99.5 2.3E-13 8E-18 119.3 10.5 91 46-150 79-189 (297)
44 1xxl_A YCGJ protein; structura 99.5 2.5E-13 8.5E-18 115.9 10.3 90 46-149 18-125 (239)
45 1ve3_A Hypothetical protein PH 99.5 2.6E-13 9E-18 113.8 10.2 103 34-150 25-144 (227)
46 3bxo_A N,N-dimethyltransferase 99.5 4.3E-13 1.5E-17 113.3 11.5 91 48-149 39-142 (239)
47 3jwh_A HEN1; methyltransferase 99.5 3.3E-13 1.1E-17 113.1 10.6 91 48-149 28-142 (217)
48 2gb4_A Thiopurine S-methyltran 99.5 2.2E-13 7.5E-18 118.4 9.7 90 47-148 66-191 (252)
49 2p35_A Trans-aconitate 2-methy 99.4 4.8E-13 1.6E-17 114.6 11.6 97 41-150 25-134 (259)
50 3h2b_A SAM-dependent methyltra 99.4 1.8E-13 6.1E-18 113.4 8.6 89 50-150 42-143 (203)
51 2gs9_A Hypothetical protein TT 99.4 2.7E-13 9.1E-18 112.9 9.5 86 49-150 36-134 (211)
52 3ege_A Putative methyltransfer 99.4 3.4E-13 1.2E-17 116.7 10.1 91 45-150 30-132 (261)
53 2p8j_A S-adenosylmethionine-de 99.4 2.7E-13 9.1E-18 112.5 8.9 93 47-150 21-130 (209)
54 2xvm_A Tellurite resistance pr 99.4 6.9E-13 2.4E-17 108.8 11.2 90 47-148 30-136 (199)
55 1kpg_A CFA synthase;, cyclopro 99.4 9.1E-13 3.1E-17 115.0 12.6 100 37-150 52-170 (287)
56 2i62_A Nicotinamide N-methyltr 99.4 1.9E-13 6.4E-18 117.3 8.0 94 46-149 53-199 (265)
57 3dh0_A SAM dependent methyltra 99.4 2.6E-13 8.8E-18 113.5 8.6 92 46-150 34-145 (219)
58 3ua3_A Protein arginine N-meth 99.4 7.1E-14 2.4E-18 136.0 5.7 139 22-174 377-557 (745)
59 3hnr_A Probable methyltransfer 99.4 4E-13 1.4E-17 112.5 9.6 91 48-150 44-147 (220)
60 3sm3_A SAM-dependent methyltra 99.4 6E-13 2.1E-17 111.8 10.8 93 47-150 28-143 (235)
61 3ccf_A Cyclopropane-fatty-acyl 99.4 3.1E-13 1.1E-17 117.8 9.1 91 46-150 54-156 (279)
62 2ex4_A Adrenal gland protein A 99.4 4E-13 1.4E-17 114.6 9.6 92 48-150 78-187 (241)
63 3ocj_A Putative exported prote 99.4 4.4E-13 1.5E-17 118.6 10.0 102 37-150 108-229 (305)
64 4htf_A S-adenosylmethionine-de 99.4 1.2E-12 4E-17 114.3 12.4 88 48-149 67-174 (285)
65 3g2m_A PCZA361.24; SAM-depende 99.4 6.8E-13 2.3E-17 116.8 10.7 91 49-150 82-192 (299)
66 3orh_A Guanidinoacetate N-meth 99.4 5.8E-13 2E-17 114.1 8.8 92 47-148 58-170 (236)
67 3bgv_A MRNA CAP guanine-N7 met 99.4 1.1E-12 3.6E-17 116.5 10.6 93 48-150 33-157 (313)
68 3lcc_A Putative methyl chlorid 99.4 9.8E-13 3.3E-17 111.6 9.8 90 49-150 66-173 (235)
69 3p9n_A Possible methyltransfer 99.4 5.2E-13 1.8E-17 109.9 7.6 93 48-152 43-157 (189)
70 3m70_A Tellurite resistance pr 99.4 1.3E-12 4.3E-17 114.2 10.5 90 48-149 119-224 (286)
71 2fk8_A Methoxy mycolic acid sy 99.4 3.1E-12 1.1E-16 113.4 13.0 100 37-150 78-196 (318)
72 2aot_A HMT, histamine N-methyl 99.4 3.9E-13 1.3E-17 118.3 7.1 137 2-149 2-173 (292)
73 2vdw_A Vaccinia virus capping 99.4 6.3E-13 2.2E-17 118.4 8.1 93 48-150 47-171 (302)
74 3g07_A 7SK snRNA methylphospha 99.4 6.7E-13 2.3E-17 117.1 8.1 58 92-149 155-221 (292)
75 1zx0_A Guanidinoacetate N-meth 99.4 6.8E-13 2.3E-17 113.0 7.5 94 47-150 58-172 (236)
76 3g5t_A Trans-aconitate 3-methy 99.4 2E-12 6.7E-17 113.9 10.7 87 48-148 35-149 (299)
77 3e8s_A Putative SAM dependent 99.4 5.2E-13 1.8E-17 111.5 6.6 90 47-151 50-155 (227)
78 3i9f_A Putative type 11 methyl 99.4 9.8E-13 3.3E-17 105.9 7.5 87 47-150 15-114 (170)
79 2g72_A Phenylethanolamine N-me 99.4 1.6E-12 5.6E-17 113.9 9.0 91 48-148 70-215 (289)
80 3mti_A RRNA methylase; SAM-dep 99.3 4.8E-12 1.7E-16 103.3 11.0 93 45-150 18-137 (185)
81 3cgg_A SAM-dependent methyltra 99.3 9.4E-12 3.2E-16 101.2 12.6 92 47-150 44-149 (195)
82 1dus_A MJ0882; hypothetical pr 99.3 5.9E-12 2E-16 102.3 11.1 93 45-150 48-159 (194)
83 3e05_A Precorrin-6Y C5,15-meth 99.3 7.5E-12 2.6E-16 103.9 11.9 90 45-150 36-144 (204)
84 3cc8_A Putative methyltransfer 99.3 5.9E-12 2E-16 105.2 11.3 89 48-150 31-132 (230)
85 3ggd_A SAM-dependent methyltra 99.3 2.5E-12 8.6E-17 109.5 8.6 94 45-150 52-165 (245)
86 2zfu_A Nucleomethylin, cerebra 99.3 4.5E-12 1.5E-16 105.9 9.6 86 47-150 65-153 (215)
87 1ej0_A FTSJ; methyltransferase 99.3 7.4E-12 2.5E-16 99.9 10.3 96 45-150 18-138 (180)
88 2kw5_A SLR1183 protein; struct 99.3 6.4E-12 2.2E-16 103.8 10.3 88 48-150 29-133 (202)
89 2avn_A Ubiquinone/menaquinone 99.3 1.3E-11 4.3E-16 106.6 12.3 89 49-150 54-154 (260)
90 1nt2_A Fibrillarin-like PRE-rR 99.3 6.6E-12 2.2E-16 105.9 10.0 89 46-149 54-162 (210)
91 2plw_A Ribosomal RNA methyltra 99.3 5.2E-12 1.8E-16 104.3 9.1 95 45-149 18-155 (201)
92 4fsd_A Arsenic methyltransfera 99.3 4.9E-12 1.7E-16 115.8 9.8 91 47-150 81-205 (383)
93 3iv6_A Putative Zn-dependent a 99.3 4.2E-12 1.4E-16 111.1 8.5 97 41-150 37-150 (261)
94 1vlm_A SAM-dependent methyltra 99.3 1.6E-11 5.4E-16 103.2 11.0 83 50-150 48-141 (219)
95 3dou_A Ribosomal RNA large sub 99.3 1.1E-11 3.8E-16 103.1 9.9 94 45-149 21-140 (191)
96 2fhp_A Methylase, putative; al 99.3 8.8E-12 3E-16 101.3 9.1 93 46-152 41-158 (187)
97 3njr_A Precorrin-6Y methylase; 99.3 1.7E-11 5.8E-16 102.7 11.0 86 46-150 52-156 (204)
98 1fbn_A MJ fibrillarin homologu 99.3 1.9E-11 6.3E-16 103.8 11.2 88 45-147 70-177 (230)
99 3lpm_A Putative methyltransfer 99.3 8.5E-12 2.9E-16 107.9 9.0 95 45-149 44-177 (259)
100 2esr_A Methyltransferase; stru 99.3 5.9E-12 2E-16 102.0 7.4 92 47-152 29-142 (177)
101 3lbf_A Protein-L-isoaspartate 99.3 1.9E-11 6.5E-16 101.7 10.1 86 45-150 73-176 (210)
102 1xdz_A Methyltransferase GIDB; 99.3 6.8E-12 2.3E-16 107.2 7.5 85 48-149 69-175 (240)
103 3eey_A Putative rRNA methylase 99.3 1.4E-11 4.9E-16 101.5 9.1 95 46-150 19-141 (197)
104 3uwp_A Histone-lysine N-methyl 99.3 9.8E-12 3.4E-16 115.0 8.7 91 45-149 169-289 (438)
105 2nyu_A Putative ribosomal RNA 99.3 1.9E-11 6.5E-16 100.3 9.5 95 45-149 18-146 (196)
106 3fpf_A Mtnas, putative unchara 99.3 4.8E-11 1.6E-15 106.1 12.5 90 45-150 118-224 (298)
107 3bkx_A SAM-dependent methyltra 99.3 2.7E-11 9.1E-16 104.8 10.7 93 45-150 39-161 (275)
108 2ift_A Putative methylase HI07 99.2 1.1E-11 3.9E-16 103.3 7.8 90 49-152 53-167 (201)
109 4e2x_A TCAB9; kijanose, tetron 99.2 4.1E-12 1.4E-16 117.0 5.3 102 35-150 93-210 (416)
110 3lst_A CALO1 methyltransferase 99.2 3.6E-11 1.2E-15 108.4 11.3 93 45-150 180-288 (348)
111 3grz_A L11 mtase, ribosomal pr 99.2 2.1E-11 7.3E-16 101.1 9.0 87 47-150 58-161 (205)
112 1jsx_A Glucose-inhibited divis 99.2 1.1E-11 3.8E-16 102.8 7.3 84 49-149 65-166 (207)
113 3g89_A Ribosomal RNA small sub 99.2 2.4E-11 8E-16 105.2 9.4 87 47-150 78-186 (249)
114 3hm2_A Precorrin-6Y C5,15-meth 99.2 2.2E-11 7.4E-16 98.2 8.4 87 46-150 22-129 (178)
115 4df3_A Fibrillarin-like rRNA/T 99.2 3.5E-11 1.2E-15 103.6 10.2 97 37-148 62-182 (233)
116 3evz_A Methyltransferase; NYSG 99.2 4.3E-11 1.5E-15 100.9 10.4 96 45-150 51-181 (230)
117 3i53_A O-methyltransferase; CO 99.2 4E-11 1.4E-15 107.2 10.7 93 46-150 166-276 (332)
118 2fpo_A Methylase YHHF; structu 99.2 2.4E-11 8.2E-16 101.5 8.6 92 49-154 54-166 (202)
119 1vbf_A 231AA long hypothetical 99.2 4E-11 1.4E-15 101.1 10.1 86 45-150 66-167 (231)
120 2frn_A Hypothetical protein PH 99.2 2.4E-11 8.1E-16 106.6 8.8 87 47-150 123-227 (278)
121 2ipx_A RRNA 2'-O-methyltransfe 99.2 3.5E-11 1.2E-15 102.1 9.5 91 45-150 73-184 (233)
122 3reo_A (ISO)eugenol O-methyltr 99.2 1.5E-10 5.3E-15 105.4 14.1 91 47-150 201-302 (368)
123 3gwz_A MMCR; methyltransferase 99.2 9.6E-11 3.3E-15 106.6 12.7 98 41-150 194-309 (369)
124 3dmg_A Probable ribosomal RNA 99.2 4E-11 1.4E-15 110.2 10.2 93 47-150 231-342 (381)
125 3mcz_A O-methyltransferase; ad 99.2 3.7E-11 1.3E-15 108.1 9.8 95 45-150 174-289 (352)
126 1g8a_A Fibrillarin-like PRE-rR 99.2 8.5E-11 2.9E-15 99.1 11.4 89 45-148 69-178 (227)
127 3hp7_A Hemolysin, putative; st 99.2 4E-11 1.4E-15 106.4 9.8 98 36-149 72-186 (291)
128 3dp7_A SAM-dependent methyltra 99.2 4E-11 1.4E-15 108.9 9.9 92 48-150 178-289 (363)
129 3q87_B N6 adenine specific DNA 99.2 3.3E-11 1.1E-15 97.9 8.3 90 48-150 22-125 (170)
130 2qe6_A Uncharacterized protein 99.2 8.6E-11 2.9E-15 103.0 11.4 91 49-150 77-198 (274)
131 2oxt_A Nucleoside-2'-O-methylt 99.2 4.8E-11 1.6E-15 104.4 9.7 90 45-148 70-185 (265)
132 3p9c_A Caffeic acid O-methyltr 99.2 2.1E-10 7E-15 104.4 14.2 91 47-150 199-300 (364)
133 1l3i_A Precorrin-6Y methyltran 99.2 5.6E-11 1.9E-15 96.3 9.4 88 46-150 30-136 (192)
134 1yzh_A TRNA (guanine-N(7)-)-me 99.2 6.9E-11 2.4E-15 99.0 9.9 92 48-149 40-157 (214)
135 2p41_A Type II methyltransfera 99.2 6.9E-11 2.4E-15 105.5 10.4 92 45-149 78-192 (305)
136 3mq2_A 16S rRNA methyltransfer 99.2 2.1E-11 7.1E-16 102.2 6.6 92 47-149 25-141 (218)
137 4dcm_A Ribosomal RNA large sub 99.2 8.4E-11 2.9E-15 107.7 11.1 101 40-150 213-336 (375)
138 3sso_A Methyltransferase; macr 99.2 6.9E-11 2.4E-15 109.0 10.3 101 35-150 204-326 (419)
139 2wa2_A Non-structural protein 99.2 7.7E-11 2.6E-15 103.8 10.2 90 45-148 78-193 (276)
140 2yxd_A Probable cobalt-precorr 99.2 8E-11 2.7E-15 94.8 9.2 84 46-150 32-133 (183)
141 2r3s_A Uncharacterized protein 99.2 1.2E-10 4.1E-15 103.7 11.2 92 48-150 164-273 (335)
142 2yxe_A Protein-L-isoaspartate 99.2 9.3E-11 3.2E-15 97.8 9.7 87 45-150 73-179 (215)
143 1af7_A Chemotaxis receptor met 99.2 1.4E-10 4.9E-15 102.0 11.3 58 92-150 195-254 (274)
144 1fp1_D Isoliquiritigenin 2'-O- 99.2 2.1E-10 7.1E-15 104.4 12.6 91 47-150 207-308 (372)
145 2ip2_A Probable phenazine-spec 99.2 2.3E-10 7.8E-15 102.1 12.6 91 47-150 166-274 (334)
146 3m33_A Uncharacterized protein 99.2 2.6E-11 8.8E-16 102.6 6.0 79 47-145 46-139 (226)
147 3dxy_A TRNA (guanine-N(7)-)-me 99.2 4.8E-11 1.6E-15 101.2 7.4 90 49-149 34-151 (218)
148 3gdh_A Trimethylguanosine synt 99.2 2.9E-12 1E-16 109.0 -0.1 87 48-148 77-181 (241)
149 1ws6_A Methyltransferase; stru 99.2 6.3E-11 2.2E-15 94.7 7.7 87 49-151 41-150 (171)
150 3htx_A HEN1; HEN1, small RNA m 99.2 7.2E-11 2.4E-15 116.9 9.6 91 48-150 720-836 (950)
151 1qzz_A RDMB, aclacinomycin-10- 99.2 1.5E-10 5.1E-15 104.8 11.0 93 45-149 178-288 (374)
152 2ozv_A Hypothetical protein AT 99.2 1.1E-10 3.8E-15 101.3 9.7 96 45-150 32-172 (260)
153 2nxc_A L11 mtase, ribosomal pr 99.2 8.2E-11 2.8E-15 101.8 8.8 86 47-149 118-219 (254)
154 1o9g_A RRNA methyltransferase; 99.1 1.1E-10 3.8E-15 100.1 9.4 93 47-149 49-215 (250)
155 1dl5_A Protein-L-isoaspartate 99.1 1.1E-10 3.9E-15 104.0 9.6 87 45-150 71-177 (317)
156 3ntv_A MW1564 protein; rossman 99.1 7.1E-11 2.4E-15 100.5 7.7 87 47-149 69-177 (232)
157 3u81_A Catechol O-methyltransf 99.1 6.4E-11 2.2E-15 99.8 7.2 90 47-150 56-172 (221)
158 3fzg_A 16S rRNA methylase; met 99.1 5.8E-11 2E-15 99.2 6.7 87 47-148 47-152 (200)
159 2fca_A TRNA (guanine-N(7)-)-me 99.1 1.1E-10 3.7E-15 98.3 8.4 92 48-149 37-154 (213)
160 2pjd_A Ribosomal RNA small sub 99.1 7.2E-11 2.5E-15 106.5 7.8 93 47-150 194-305 (343)
161 3id6_C Fibrillarin-like rRNA/T 99.1 3.2E-10 1.1E-14 97.5 11.4 89 45-149 72-182 (232)
162 4dzr_A Protein-(glutamine-N5) 99.1 2.2E-11 7.4E-16 100.7 3.7 92 48-149 29-166 (215)
163 1x19_A CRTF-related protein; m 99.1 4.3E-10 1.5E-14 101.6 12.4 94 45-150 186-297 (359)
164 3mb5_A SAM-dependent methyltra 99.1 1.4E-10 4.9E-15 99.3 8.8 92 41-150 85-196 (255)
165 2b3t_A Protein methyltransfera 99.1 4.2E-10 1.4E-14 98.1 11.9 92 48-149 108-239 (276)
166 3opn_A Putative hemolysin; str 99.1 4.1E-11 1.4E-15 102.8 5.1 96 37-148 25-137 (232)
167 1tw3_A COMT, carminomycin 4-O- 99.1 2.6E-10 8.7E-15 102.8 10.4 93 46-150 180-290 (360)
168 3bzb_A Uncharacterized protein 99.1 4.6E-10 1.6E-14 98.5 11.5 102 34-148 64-205 (281)
169 3duw_A OMT, O-methyltransferas 99.1 1.1E-10 3.8E-15 98.0 6.7 88 47-150 56-169 (223)
170 3tma_A Methyltransferase; thum 99.1 3.1E-10 1.1E-14 102.6 10.0 105 36-150 190-319 (354)
171 2bm8_A Cephalosporin hydroxyla 99.1 4.3E-10 1.5E-14 96.4 9.6 85 49-149 81-188 (236)
172 1jg1_A PIMT;, protein-L-isoasp 99.1 2.4E-10 8.1E-15 97.2 8.0 85 46-150 88-191 (235)
173 1yb2_A Hypothetical protein TA 99.1 2.2E-10 7.6E-15 99.9 7.9 93 40-150 101-213 (275)
174 3dr5_A Putative O-methyltransf 99.1 2.5E-10 8.6E-15 96.9 8.0 100 35-150 42-165 (221)
175 1p91_A Ribosomal RNA large sub 99.1 3.3E-10 1.1E-14 97.8 8.7 83 48-150 84-180 (269)
176 3tfw_A Putative O-methyltransf 99.1 1.9E-10 6.6E-15 98.9 7.2 88 47-150 61-172 (248)
177 3adn_A Spermidine synthase; am 99.1 3E-10 1E-14 100.8 8.6 92 48-150 82-200 (294)
178 3tr6_A O-methyltransferase; ce 99.1 1.3E-10 4.4E-15 97.6 5.8 88 47-150 62-176 (225)
179 3r3h_A O-methyltransferase, SA 99.1 1.5E-10 5.1E-15 99.6 6.1 88 47-150 58-172 (242)
180 1fp2_A Isoflavone O-methyltran 99.0 6.3E-10 2.2E-14 100.3 10.2 91 47-150 186-290 (352)
181 2igt_A SAM dependent methyltra 99.0 2.5E-10 8.4E-15 103.0 7.4 92 48-150 152-274 (332)
182 2b78_A Hypothetical protein SM 99.0 4E-10 1.4E-14 103.5 9.0 95 48-152 211-335 (385)
183 4a6d_A Hydroxyindole O-methylt 99.0 2.2E-09 7.5E-14 97.2 13.7 99 40-150 170-285 (353)
184 2gpy_A O-methyltransferase; st 99.0 2.5E-10 8.4E-15 96.7 6.9 87 47-149 52-161 (233)
185 1u2z_A Histone-lysine N-methyl 99.0 7E-10 2.4E-14 103.4 10.5 91 45-149 238-360 (433)
186 3a27_A TYW2, uncharacterized p 99.0 2.7E-10 9.2E-15 99.7 7.2 88 46-150 116-221 (272)
187 2yvl_A TRMI protein, hypotheti 99.0 5.5E-10 1.9E-14 94.9 8.9 87 45-150 87-192 (248)
188 1ne2_A Hypothetical protein TA 99.0 6.6E-10 2.3E-14 91.8 9.0 87 46-148 48-146 (200)
189 2pwy_A TRNA (adenine-N(1)-)-me 99.0 3.9E-10 1.3E-14 96.3 7.9 88 45-150 92-200 (258)
190 3ckk_A TRNA (guanine-N(7)-)-me 99.0 4.4E-10 1.5E-14 96.3 8.2 93 47-149 44-169 (235)
191 2xyq_A Putative 2'-O-methyl tr 99.0 9.1E-10 3.1E-14 97.6 10.4 108 34-149 47-172 (290)
192 3lec_A NADB-rossmann superfami 99.0 8.4E-10 2.9E-14 94.7 9.6 89 46-149 18-126 (230)
193 1i1n_A Protein-L-isoaspartate 99.0 1.2E-09 4.1E-14 91.8 10.0 86 46-150 74-184 (226)
194 3bwc_A Spermidine synthase; SA 99.0 9.2E-10 3.2E-14 97.8 9.7 92 48-150 94-212 (304)
195 1o54_A SAM-dependent O-methylt 99.0 5E-10 1.7E-14 97.5 7.9 88 45-150 108-215 (277)
196 3kr9_A SAM-dependent methyltra 99.0 1.1E-09 3.8E-14 93.7 9.6 89 46-149 12-120 (225)
197 1ixk_A Methyltransferase; open 99.0 6.6E-10 2.3E-14 99.2 8.4 97 46-152 115-250 (315)
198 3ajd_A Putative methyltransfer 99.0 5E-10 1.7E-14 97.9 7.5 98 46-153 80-216 (274)
199 1i9g_A Hypothetical protein RV 99.0 5.1E-10 1.8E-14 97.1 7.5 88 45-150 95-205 (280)
200 3p2e_A 16S rRNA methylase; met 99.0 4.6E-10 1.6E-14 95.6 6.9 89 48-146 23-137 (225)
201 2pbf_A Protein-L-isoaspartate 99.0 1.6E-09 5.4E-14 91.1 10.1 86 46-150 77-195 (227)
202 3c0k_A UPF0064 protein YCCW; P 99.0 5.7E-10 2E-14 102.5 7.8 95 48-152 219-343 (396)
203 3k6r_A Putative transferase PH 99.0 4.9E-10 1.7E-14 98.8 6.8 85 47-148 123-225 (278)
204 3gnl_A Uncharacterized protein 99.0 1.5E-09 5E-14 94.0 9.6 89 46-149 18-126 (244)
205 2ih2_A Modification methylase 99.0 3.6E-09 1.2E-13 97.0 12.6 96 47-152 37-168 (421)
206 2b25_A Hypothetical protein; s 99.0 9.4E-10 3.2E-14 98.6 8.5 87 46-150 102-221 (336)
207 1zg3_A Isoflavanone 4'-O-methy 99.0 1.7E-09 5.9E-14 97.6 9.9 90 48-150 192-295 (358)
208 3c3p_A Methyltransferase; NP_9 99.0 9.8E-10 3.4E-14 91.5 7.5 85 48-149 55-161 (210)
209 2as0_A Hypothetical protein PH 99.0 8.6E-10 2.9E-14 101.3 7.7 95 48-152 216-339 (396)
210 2hnk_A SAM-dependent O-methylt 99.0 5.3E-10 1.8E-14 95.2 5.9 87 47-149 58-182 (239)
211 1nv8_A HEMK protein; class I a 99.0 7E-10 2.4E-14 97.8 6.7 91 49-150 123-251 (284)
212 3giw_A Protein of unknown func 99.0 2.2E-09 7.6E-14 94.4 9.6 92 50-150 79-202 (277)
213 3v97_A Ribosomal RNA large sub 98.9 8E-10 2.7E-14 108.9 6.8 93 48-150 538-659 (703)
214 1r18_A Protein-L-isoaspartate( 98.9 1.9E-09 6.6E-14 90.9 8.2 86 46-150 81-196 (227)
215 1inl_A Spermidine synthase; be 98.9 1.1E-09 3.9E-14 96.9 7.1 93 48-150 89-207 (296)
216 1sui_A Caffeoyl-COA O-methyltr 98.9 8.4E-10 2.9E-14 95.2 5.8 86 48-149 78-191 (247)
217 1iy9_A Spermidine synthase; ro 98.9 1.4E-09 4.7E-14 95.4 7.2 93 48-150 74-191 (275)
218 1xj5_A Spermidine synthase 1; 98.9 5.2E-09 1.8E-13 94.4 11.1 93 48-150 119-237 (334)
219 1wxx_A TT1595, hypothetical pr 98.9 8.9E-10 3E-14 100.8 5.7 93 49-152 209-329 (382)
220 4dmg_A Putative uncharacterize 98.9 1.3E-09 4.5E-14 100.5 6.8 95 47-152 212-330 (393)
221 2avd_A Catechol-O-methyltransf 98.9 1.3E-09 4.3E-14 91.8 6.1 87 47-149 67-180 (229)
222 3c3y_A Pfomt, O-methyltransfer 98.9 1.7E-09 5.9E-14 92.4 6.8 86 48-149 69-182 (237)
223 2vdv_E TRNA (guanine-N(7)-)-me 98.9 3E-09 1E-13 91.1 8.3 92 47-148 47-173 (246)
224 2pt6_A Spermidine synthase; tr 98.9 2.1E-09 7.3E-14 96.3 7.7 92 48-150 115-232 (321)
225 4azs_A Methyltransferase WBDD; 98.9 5.2E-10 1.8E-14 107.6 3.8 87 48-146 65-171 (569)
226 2i7c_A Spermidine synthase; tr 98.9 3.5E-09 1.2E-13 93.1 8.8 92 48-150 77-194 (283)
227 2yxl_A PH0851 protein, 450AA l 98.9 5.1E-09 1.8E-13 97.9 10.4 97 46-152 256-393 (450)
228 3frh_A 16S rRNA methylase; met 98.9 4.1E-09 1.4E-13 91.0 8.7 86 48-147 104-205 (253)
229 2h00_A Methyltransferase 10 do 98.9 9.3E-10 3.2E-14 94.3 4.6 90 49-148 65-192 (254)
230 1wy7_A Hypothetical protein PH 98.9 2.3E-08 7.8E-13 82.7 12.6 87 46-147 46-148 (207)
231 2yx1_A Hypothetical protein MJ 98.9 3.4E-09 1.2E-13 95.4 7.8 82 48-150 194-293 (336)
232 2cmg_A Spermidine synthase; tr 98.9 3.8E-09 1.3E-13 92.1 7.8 82 48-150 71-173 (262)
233 3cbg_A O-methyltransferase; cy 98.9 3.3E-09 1.1E-13 90.2 7.2 87 48-150 71-184 (232)
234 2o07_A Spermidine synthase; st 98.9 1.7E-09 5.8E-14 96.3 5.6 93 48-150 94-211 (304)
235 1mjf_A Spermidine synthase; sp 98.9 2.6E-09 9E-14 93.8 6.7 92 48-150 74-195 (281)
236 2b2c_A Spermidine synthase; be 98.9 2.3E-09 8E-14 95.9 6.1 92 48-150 107-224 (314)
237 1uir_A Polyamine aminopropyltr 98.9 3.4E-09 1.2E-13 94.6 7.1 93 48-150 76-197 (314)
238 1sqg_A SUN protein, FMU protei 98.8 1.1E-08 3.8E-13 94.9 10.7 98 46-153 243-379 (429)
239 2qm3_A Predicted methyltransfe 98.8 1.1E-08 3.7E-13 93.3 10.2 89 46-149 169-279 (373)
240 3gjy_A Spermidine synthase; AP 98.8 5.3E-09 1.8E-13 93.8 7.8 91 50-150 90-202 (317)
241 3m6w_A RRNA methylase; rRNA me 98.8 3.5E-09 1.2E-13 99.5 6.7 97 46-152 98-233 (464)
242 2frx_A Hypothetical protein YE 98.8 7.5E-09 2.6E-13 97.7 8.6 94 49-152 117-250 (479)
243 3m4x_A NOL1/NOP2/SUN family pr 98.8 5.4E-09 1.9E-13 98.1 7.4 97 46-152 102-238 (456)
244 3tm4_A TRNA (guanine N2-)-meth 98.8 9.8E-09 3.3E-13 93.7 8.8 89 47-147 215-328 (373)
245 1zq9_A Probable dimethyladenos 98.8 7.8E-09 2.7E-13 91.0 7.8 61 45-117 24-102 (285)
246 2f8l_A Hypothetical protein LM 98.8 1.2E-08 4.1E-13 91.8 8.6 98 48-155 129-263 (344)
247 3lcv_B Sisomicin-gentamicin re 98.8 1.1E-08 3.8E-13 89.3 7.2 89 48-148 131-236 (281)
248 2ld4_A Anamorsin; methyltransf 98.7 6.4E-09 2.2E-13 84.1 4.3 91 45-149 8-102 (176)
249 1yub_A Ermam, rRNA methyltrans 98.7 3.7E-09 1.3E-13 90.7 2.9 91 45-149 25-146 (245)
250 2jjq_A Uncharacterized RNA met 98.7 6.6E-08 2.3E-12 89.9 11.4 86 47-150 288-389 (425)
251 3ldu_A Putative methylase; str 98.7 3E-08 1E-12 91.0 8.9 106 35-150 181-346 (385)
252 3ldg_A Putative uncharacterize 98.7 9.1E-08 3.1E-12 87.9 10.3 106 35-150 180-345 (384)
253 3k0b_A Predicted N6-adenine-sp 98.7 5.3E-08 1.8E-12 89.7 8.5 105 35-149 187-351 (393)
254 3evf_A RNA-directed RNA polyme 98.6 8.3E-08 2.8E-12 84.0 9.1 101 37-149 63-185 (277)
255 2okc_A Type I restriction enzy 98.6 2.8E-08 9.7E-13 92.6 6.5 103 38-150 160-309 (445)
256 1uwv_A 23S rRNA (uracil-5-)-me 98.6 1.8E-07 6E-12 87.0 11.3 87 46-150 283-391 (433)
257 2qfm_A Spermine synthase; sper 98.6 1.2E-07 4.1E-12 86.3 9.1 95 48-152 187-318 (364)
258 2h1r_A Dimethyladenosine trans 98.6 1E-07 3.4E-12 84.5 8.4 60 46-117 39-115 (299)
259 3gru_A Dimethyladenosine trans 98.5 2.5E-07 8.4E-12 82.1 8.6 68 39-117 40-123 (295)
260 3axs_A Probable N(2),N(2)-dime 98.5 4.5E-08 1.6E-12 90.1 3.8 85 48-149 51-159 (392)
261 2dul_A N(2),N(2)-dimethylguano 98.4 1.1E-07 3.9E-12 87.0 4.2 83 49-148 47-164 (378)
262 1qam_A ERMC' methyltransferase 98.4 1.7E-06 5.7E-11 74.2 11.4 68 37-116 18-102 (244)
263 2b9e_A NOL1/NOP2/SUN domain fa 98.4 1.3E-06 4.5E-11 77.8 11.0 96 46-152 99-238 (309)
264 3bt7_A TRNA (uracil-5-)-methyl 98.4 4.9E-07 1.7E-11 82.2 7.9 81 50-150 214-328 (369)
265 3fut_A Dimethyladenosine trans 98.4 9E-07 3.1E-11 77.5 9.2 86 45-147 43-144 (271)
266 3b5i_A S-adenosyl-L-methionine 98.4 1.3E-06 4.3E-11 80.0 10.1 47 104-150 145-227 (374)
267 3gcz_A Polyprotein; flavivirus 98.4 4.3E-07 1.5E-11 79.6 6.6 101 37-149 79-202 (282)
268 1m6e_X S-adenosyl-L-methionnin 98.3 1.8E-06 6E-11 78.6 9.0 100 49-150 51-211 (359)
269 3tqs_A Ribosomal RNA small sub 98.3 1.4E-06 4.7E-11 75.6 7.9 60 45-116 25-104 (255)
270 3p8z_A Mtase, non-structural p 98.3 4E-06 1.4E-10 71.8 10.1 98 37-148 67-186 (267)
271 4auk_A Ribosomal RNA large sub 98.3 5.2E-06 1.8E-10 75.6 11.1 60 47-117 209-279 (375)
272 2efj_A 3,7-dimethylxanthine me 98.2 2.2E-06 7.6E-11 78.6 8.3 57 94-150 131-227 (384)
273 2ar0_A M.ecoki, type I restric 98.2 8.5E-07 2.9E-11 84.8 5.4 98 46-151 166-315 (541)
274 3eld_A Methyltransferase; flav 98.2 4.2E-06 1.4E-10 73.8 8.8 102 36-149 69-192 (300)
275 3ftd_A Dimethyladenosine trans 98.2 5.5E-06 1.9E-10 71.4 9.5 65 41-116 23-103 (249)
276 3v97_A Ribosomal RNA large sub 98.2 3.9E-06 1.3E-10 82.6 9.5 105 35-149 176-348 (703)
277 3o4f_A Spermidine synthase; am 98.2 4.7E-06 1.6E-10 73.8 8.8 96 48-153 82-203 (294)
278 3lkz_A Non-structural protein 98.2 7.7E-06 2.6E-10 72.1 9.8 101 36-149 82-205 (321)
279 2px2_A Genome polyprotein [con 98.1 3.6E-06 1.2E-10 72.9 6.7 99 37-148 62-183 (269)
280 3r24_A NSP16, 2'-O-methyl tran 98.1 1.4E-05 4.9E-10 70.4 9.8 106 31-148 90-217 (344)
281 2k4m_A TR8_protein, UPF0146 pr 98.1 9.1E-06 3.1E-10 64.7 7.6 93 36-147 24-122 (153)
282 3uzu_A Ribosomal RNA small sub 98.0 5.6E-06 1.9E-10 72.7 5.9 52 45-106 38-105 (279)
283 2r6z_A UPF0341 protein in RSP 98.0 3.2E-06 1.1E-10 73.3 3.5 62 47-119 81-172 (258)
284 3lkd_A Type I restriction-modi 98.0 5.8E-05 2E-09 72.1 12.1 97 47-152 219-362 (542)
285 3cvo_A Methyltransferase-like 97.9 3.9E-05 1.3E-09 64.3 8.7 82 48-149 29-155 (202)
286 1qyr_A KSGA, high level kasuga 97.9 7.2E-06 2.5E-10 70.9 4.4 58 46-116 18-98 (252)
287 3khk_A Type I restriction-modi 97.9 1.1E-05 3.7E-10 77.2 5.3 92 52-151 247-398 (544)
288 2oyr_A UPF0341 protein YHIQ; a 97.9 1.6E-05 5.5E-10 69.0 5.7 63 46-119 83-175 (258)
289 3s1s_A Restriction endonucleas 97.8 0.0001 3.4E-09 73.2 11.7 97 47-153 319-470 (878)
290 1m6y_A S-adenosyl-methyltransf 97.8 1.8E-05 6E-10 70.3 4.9 61 46-116 23-106 (301)
291 3c6k_A Spermine synthase; sper 97.7 5E-05 1.7E-09 69.4 6.7 92 49-150 205-333 (381)
292 3ll7_A Putative methyltransfer 97.7 2.7E-05 9.1E-10 72.0 4.6 58 49-117 93-172 (410)
293 4fzv_A Putative methyltransfer 97.7 5.6E-05 1.9E-09 68.7 6.1 98 46-153 145-289 (359)
294 2qy6_A UPF0209 protein YFCK; s 97.6 5.6E-05 1.9E-09 65.5 5.5 56 92-148 151-213 (257)
295 2wk1_A NOVP; transferase, O-me 97.6 0.00027 9.3E-09 62.1 9.6 91 48-149 105-245 (282)
296 3ufb_A Type I restriction-modi 97.2 0.0009 3.1E-08 63.7 9.2 113 37-150 205-364 (530)
297 2zig_A TTHA0409, putative modi 95.9 0.0064 2.2E-07 53.2 4.3 32 48-90 234-265 (297)
298 2oo3_A Protein involved in cat 95.8 0.0074 2.5E-07 52.9 4.2 98 35-150 81-200 (283)
299 1wg8_A Predicted S-adenosylmet 95.7 0.0096 3.3E-07 52.2 4.8 60 46-116 19-97 (285)
300 3g7u_A Cytosine-specific methy 95.2 0.057 1.9E-06 49.0 8.1 56 51-116 3-79 (376)
301 2vz8_A Fatty acid synthase; tr 94.9 0.019 6.4E-07 63.8 4.9 91 48-149 1239-1349(2512)
302 3ubt_Y Modification methylase 94.9 0.083 2.8E-06 46.3 8.3 55 51-115 1-68 (331)
303 3vyw_A MNMC2; tRNA wobble urid 94.7 0.051 1.7E-06 48.1 6.2 56 93-149 168-227 (308)
304 2c7p_A Modification methylase 94.7 0.083 2.8E-06 47.0 7.7 56 48-115 9-78 (327)
305 1rjd_A PPM1P, carboxy methyl t 94.5 0.084 2.9E-06 47.1 7.2 87 48-146 96-230 (334)
306 1g55_A DNA cytosine methyltran 94.3 0.065 2.2E-06 47.9 6.0 57 51-117 3-77 (343)
307 3tos_A CALS11; methyltransfera 93.9 0.18 6E-06 43.4 7.9 54 92-150 159-219 (257)
308 2uyo_A Hypothetical protein ML 93.9 0.2 6.8E-06 44.1 8.5 88 51-150 104-220 (310)
309 1g60_A Adenine-specific methyl 93.8 0.057 1.9E-06 46.1 4.4 33 47-90 210-242 (260)
310 1i4w_A Mitochondrial replicati 93.7 0.064 2.2E-06 48.3 4.9 68 27-104 34-118 (353)
311 2qrv_A DNA (cytosine-5)-methyl 93.5 0.34 1.2E-05 42.4 9.1 60 46-115 12-90 (295)
312 3iht_A S-adenosyl-L-methionine 93.4 0.17 5.9E-06 40.4 6.3 93 48-149 39-148 (174)
313 3tka_A Ribosomal RNA small sub 93.1 0.19 6.4E-06 45.1 6.7 62 45-115 53-135 (347)
314 2zig_A TTHA0409, putative modi 93.0 0.061 2.1E-06 46.8 3.4 60 91-150 20-99 (297)
315 1f8f_A Benzyl alcohol dehydrog 92.5 0.35 1.2E-05 43.0 7.8 90 41-149 182-290 (371)
316 2hwk_A Helicase NSP2; rossman 91.4 0.42 1.4E-05 41.8 6.7 80 70-149 152-255 (320)
317 2dph_A Formaldehyde dismutase; 89.8 0.74 2.5E-05 41.4 7.3 92 45-148 181-299 (398)
318 3qv2_A 5-cytosine DNA methyltr 89.8 0.86 2.9E-05 40.3 7.5 57 49-116 9-84 (327)
319 4h0n_A DNMT2; SAH binding, tra 89.7 0.29 9.9E-06 43.5 4.4 54 51-114 4-75 (333)
320 1boo_A Protein (N-4 cytosine-s 89.4 0.17 5.8E-06 44.7 2.6 60 91-150 13-86 (323)
321 3pvc_A TRNA 5-methylaminomethy 87.8 0.49 1.7E-05 45.9 4.8 56 92-148 149-211 (689)
322 1kol_A Formaldehyde dehydrogen 87.7 1.3 4.5E-05 39.6 7.4 94 45-148 181-300 (398)
323 3two_A Mannitol dehydrogenase; 86.3 3.5 0.00012 36.0 9.2 82 45-149 172-266 (348)
324 3me5_A Cytosine-specific methy 85.5 1.2 4.2E-05 41.6 6.0 56 50-115 88-176 (482)
325 3ps9_A TRNA 5-methylaminomethy 85.4 0.99 3.4E-05 43.5 5.6 54 94-148 159-219 (676)
326 1eg2_A Modification methylase 84.7 0.69 2.4E-05 40.8 3.7 59 92-150 38-108 (319)
327 1boo_A Protein (N-4 cytosine-s 83.9 0.89 3E-05 39.9 4.1 33 47-90 250-282 (323)
328 1g60_A Adenine-specific methyl 82.9 0.72 2.4E-05 39.1 3.0 56 93-148 5-74 (260)
329 4eez_A Alcohol dehydrogenase 1 82.2 2.1 7.2E-05 37.3 5.9 88 45-149 159-264 (348)
330 4a2c_A Galactitol-1-phosphate 80.8 4.3 0.00015 35.2 7.4 88 45-149 156-261 (346)
331 1eg2_A Modification methylase 80.3 1.3 4.6E-05 38.9 3.9 35 47-92 240-274 (319)
332 3gms_A Putative NADPH:quinone 79.8 4.5 0.00015 35.2 7.2 90 41-149 136-244 (340)
333 3swr_A DNA (cytosine-5)-methyl 79.3 4.9 0.00017 40.9 8.1 58 49-116 539-626 (1002)
334 4ej6_A Putative zinc-binding d 79.1 6.1 0.00021 34.9 7.9 86 45-149 178-285 (370)
335 1uuf_A YAHK, zinc-type alcohol 78.3 4 0.00014 36.1 6.5 85 45-149 190-289 (369)
336 3fwz_A Inner membrane protein 78.0 6 0.0002 29.7 6.6 84 50-148 7-105 (140)
337 1cdo_A Alcohol dehydrogenase; 77.8 7.8 0.00027 34.1 8.2 86 43-148 186-294 (374)
338 1pqw_A Polyketide synthase; ro 77.7 8.9 0.0003 30.2 7.8 90 41-149 30-138 (198)
339 2fzw_A Alcohol dehydrogenase c 77.5 7.5 0.00026 34.1 8.0 87 41-148 182-292 (373)
340 1pl8_A Human sorbitol dehydrog 77.4 4.7 0.00016 35.3 6.6 86 45-149 167-274 (356)
341 2py6_A Methyltransferase FKBM; 77.1 2.3 8E-05 38.5 4.6 34 47-90 224-260 (409)
342 3s2e_A Zinc-containing alcohol 76.9 7.3 0.00025 33.7 7.7 86 44-149 161-264 (340)
343 1e3i_A Alcohol dehydrogenase, 76.3 8.8 0.0003 33.7 8.1 89 41-149 187-298 (376)
344 3uko_A Alcohol dehydrogenase c 76.1 9.8 0.00033 33.5 8.4 88 41-149 185-296 (378)
345 4b7c_A Probable oxidoreductase 75.9 7.2 0.00025 33.7 7.3 90 41-149 141-249 (336)
346 1p0f_A NADP-dependent alcohol 75.9 11 0.00038 33.1 8.7 87 41-148 183-293 (373)
347 3jyn_A Quinone oxidoreductase; 75.7 6.9 0.00023 33.7 7.1 91 41-149 132-240 (325)
348 3fpc_A NADP-dependent alcohol 75.4 3.5 0.00012 36.1 5.2 85 45-148 162-266 (352)
349 4dvj_A Putative zinc-dependent 75.0 6.5 0.00022 34.6 6.9 79 49-147 171-269 (363)
350 2jhf_A Alcohol dehydrogenase E 75.0 12 0.00041 32.9 8.6 88 41-148 183-293 (374)
351 1v3u_A Leukotriene B4 12- hydr 74.8 9.6 0.00033 32.8 7.8 89 41-148 137-244 (333)
352 3goh_A Alcohol dehydrogenase, 74.3 7.9 0.00027 33.1 7.1 83 43-148 136-229 (315)
353 3ip1_A Alcohol dehydrogenase, 72.8 9.1 0.00031 34.2 7.3 90 45-149 209-319 (404)
354 4eye_A Probable oxidoreductase 72.2 9.2 0.00032 33.2 7.1 88 41-148 151-257 (342)
355 4dcm_A Ribosomal RNA large sub 71.4 26 0.00089 31.1 10.0 81 49-149 38-137 (375)
356 3uog_A Alcohol dehydrogenase; 71.4 9.2 0.00032 33.5 6.9 88 41-149 181-288 (363)
357 3qwb_A Probable quinone oxidor 71.3 11 0.00036 32.6 7.2 90 41-149 140-248 (334)
358 1ej6_A Lambda2; icosahedral, n 70.9 6.6 0.00022 40.2 6.2 90 47-148 819-926 (1289)
359 2g1u_A Hypothetical protein TM 70.6 15 0.0005 27.8 7.2 89 46-149 15-119 (155)
360 2d8a_A PH0655, probable L-thre 69.1 10 0.00034 33.0 6.6 86 44-149 163-268 (348)
361 3v2g_A 3-oxoacyl-[acyl-carrier 69.1 16 0.00054 30.6 7.7 95 47-149 28-166 (271)
362 1vj0_A Alcohol dehydrogenase, 68.9 15 0.00052 32.4 7.9 87 45-149 190-299 (380)
363 3av4_A DNA (cytosine-5)-methyl 68.9 12 0.00041 39.3 8.0 57 49-115 850-936 (1330)
364 4ft4_B DNA (cytosine-5)-methyl 68.7 12 0.00041 36.6 7.7 33 50-90 212-248 (784)
365 3trk_A Nonstructural polyprote 68.6 5.2 0.00018 34.7 4.3 80 70-149 154-260 (324)
366 4dup_A Quinone oxidoreductase; 68.3 17 0.0006 31.6 8.1 90 41-148 159-265 (353)
367 3m6i_A L-arabinitol 4-dehydrog 67.9 9.8 0.00034 33.2 6.3 86 45-149 175-284 (363)
368 2c0c_A Zinc binding alcohol de 67.9 12 0.00041 32.8 6.9 84 45-149 159-262 (362)
369 1jvb_A NAD(H)-dependent alcoho 67.6 15 0.0005 31.9 7.4 86 45-149 166-272 (347)
370 3c85_A Putative glutathione-re 67.4 16 0.00055 28.3 7.0 86 48-148 37-139 (183)
371 1yb5_A Quinone oxidoreductase; 67.0 17 0.00059 31.6 7.8 89 41-148 162-269 (351)
372 3ius_A Uncharacterized conserv 66.8 46 0.0016 27.2 10.2 90 51-151 6-106 (286)
373 2hcy_A Alcohol dehydrogenase 1 66.1 15 0.0005 31.9 7.1 87 45-149 165-270 (347)
374 2dq4_A L-threonine 3-dehydroge 65.5 17 0.00057 31.5 7.3 85 44-149 160-263 (343)
375 4eso_A Putative oxidoreductase 65.3 19 0.00066 29.6 7.4 94 48-149 6-139 (255)
376 2h6e_A ADH-4, D-arabinose 1-de 64.7 5.5 0.00019 34.6 4.0 83 46-149 168-270 (344)
377 3oig_A Enoyl-[acyl-carrier-pro 64.5 57 0.0019 26.6 11.3 94 48-149 5-148 (266)
378 4fgs_A Probable dehydrogenase 63.4 18 0.00063 30.8 7.0 95 47-149 26-160 (273)
379 1piw_A Hypothetical zinc-type 63.1 12 0.0004 32.7 5.9 86 45-148 175-276 (360)
380 3iei_A Leucine carboxyl methyl 63.1 31 0.0011 30.3 8.6 55 92-148 164-229 (334)
381 1id1_A Putative potassium chan 63.0 15 0.00052 27.6 5.9 84 50-148 3-105 (153)
382 2j3h_A NADP-dependent oxidored 62.9 26 0.0009 30.1 8.1 89 41-148 147-255 (345)
383 2eih_A Alcohol dehydrogenase; 61.8 24 0.00083 30.4 7.6 86 45-149 162-266 (343)
384 3ijr_A Oxidoreductase, short c 61.3 21 0.00072 30.1 7.0 94 48-149 45-183 (291)
385 1lss_A TRK system potassium up 60.8 28 0.00097 25.0 6.9 80 50-144 4-99 (140)
386 2km1_A Protein DRE2; yeast, an 60.6 4.6 0.00016 31.2 2.4 39 107-146 58-96 (136)
387 3l9w_A Glutathione-regulated p 60.3 11 0.00036 34.3 5.1 84 50-148 4-102 (413)
388 3fbg_A Putative arginate lyase 59.8 14 0.00048 32.0 5.8 79 49-148 150-248 (346)
389 3is3_A 17BETA-hydroxysteroid d 59.5 23 0.00077 29.4 6.8 95 47-149 15-153 (270)
390 4dkj_A Cytosine-specific methy 59.2 17 0.00059 32.9 6.3 16 50-65 10-25 (403)
391 1wly_A CAAR, 2-haloacrylate re 59.0 25 0.00085 30.1 7.2 90 41-149 137-245 (333)
392 3ek2_A Enoyl-(acyl-carrier-pro 58.9 34 0.0012 27.9 7.8 97 45-149 9-154 (271)
393 1qor_A Quinone oxidoreductase; 58.6 15 0.0005 31.5 5.6 87 44-149 135-240 (327)
394 3grk_A Enoyl-(acyl-carrier-pro 58.5 48 0.0016 27.9 8.8 94 47-149 28-170 (293)
395 3tqh_A Quinone oxidoreductase; 58.3 30 0.001 29.4 7.6 84 44-148 147-245 (321)
396 1e3j_A NADP(H)-dependent ketos 58.1 25 0.00085 30.4 7.1 85 45-149 164-272 (352)
397 3pxx_A Carveol dehydrogenase; 57.9 23 0.0008 29.3 6.7 94 48-149 8-154 (287)
398 1rjw_A ADH-HT, alcohol dehydro 57.8 23 0.00079 30.5 6.8 83 46-148 161-261 (339)
399 3o26_A Salutaridine reductase; 57.7 12 0.00039 31.4 4.7 61 48-116 10-99 (311)
400 3llv_A Exopolyphosphatase-rela 57.3 22 0.00076 26.1 5.8 56 50-114 6-76 (141)
401 2zb4_A Prostaglandin reductase 57.1 21 0.00072 31.0 6.4 86 45-148 154-260 (357)
402 3jv7_A ADH-A; dehydrogenase, n 57.1 18 0.00061 31.3 5.9 84 46-149 168-271 (345)
403 3vrd_B FCCB subunit, flavocyto 56.3 28 0.00097 30.4 7.2 34 49-90 1-35 (401)
404 1iz0_A Quinone oxidoreductase; 56.3 22 0.00075 30.0 6.3 81 47-148 123-218 (302)
405 2j8z_A Quinone oxidoreductase; 55.8 28 0.00097 30.2 7.1 88 43-149 156-262 (354)
406 3edm_A Short chain dehydrogena 55.6 25 0.00086 29.0 6.4 94 48-149 6-144 (259)
407 3ksu_A 3-oxoacyl-acyl carrier 55.5 31 0.001 28.5 6.9 94 47-148 8-147 (262)
408 3iyl_W VP1; non-enveloped viru 55.0 11 0.00039 38.7 4.7 89 48-148 826-933 (1299)
409 3k31_A Enoyl-(acyl-carrier-pro 54.8 63 0.0021 27.1 9.0 94 48-149 28-169 (296)
410 3gaz_A Alcohol dehydrogenase s 54.5 33 0.0011 29.6 7.3 89 41-149 142-247 (343)
411 3hwr_A 2-dehydropantoate 2-red 54.5 59 0.002 27.8 8.8 86 48-149 17-121 (318)
412 2b5w_A Glucose dehydrogenase; 53.5 25 0.00087 30.5 6.3 78 51-149 174-274 (357)
413 3dfz_A SIRC, precorrin-2 dehyd 53.5 43 0.0015 27.6 7.4 59 47-115 28-98 (223)
414 3hn2_A 2-dehydropantoate 2-red 53.4 55 0.0019 27.8 8.4 84 51-149 3-104 (312)
415 3tum_A Shikimate dehydrogenase 52.5 15 0.0005 31.4 4.4 47 36-90 111-157 (269)
416 1zsy_A Mitochondrial 2-enoyl t 51.8 74 0.0025 27.4 9.1 19 41-59 159-177 (357)
417 3ghy_A Ketopantoate reductase 51.4 41 0.0014 29.0 7.3 85 51-150 4-106 (335)
418 3r3s_A Oxidoreductase; structu 51.0 43 0.0015 28.2 7.3 94 48-149 47-186 (294)
419 4a27_A Synaptic vesicle membra 50.9 35 0.0012 29.4 6.9 90 41-149 134-239 (349)
420 3tjr_A Short chain dehydrogena 50.4 64 0.0022 27.1 8.3 62 47-116 28-116 (301)
421 3dmg_A Probable ribosomal RNA 50.3 65 0.0022 28.6 8.6 84 49-148 45-139 (381)
422 3u5t_A 3-oxoacyl-[acyl-carrier 50.1 31 0.0011 28.6 6.1 94 48-149 25-162 (267)
423 1pjc_A Protein (L-alanine dehy 49.8 5.4 0.00018 35.4 1.3 88 49-148 166-267 (361)
424 2ew2_A 2-dehydropantoate 2-red 49.8 89 0.003 25.9 9.1 83 51-148 4-108 (316)
425 3o38_A Short chain dehydrogena 49.1 71 0.0024 26.0 8.2 61 48-116 20-109 (266)
426 2f1k_A Prephenate dehydrogenas 48.1 72 0.0025 26.3 8.2 77 52-146 2-89 (279)
427 3pwz_A Shikimate dehydrogenase 47.4 64 0.0022 27.3 7.7 94 35-145 104-212 (272)
428 4gua_A Non-structural polyprot 46.8 18 0.00061 34.6 4.3 79 70-149 165-270 (670)
429 3ulk_A Ketol-acid reductoisome 46.8 18 0.00062 33.6 4.3 86 46-149 33-133 (491)
430 3gvc_A Oxidoreductase, probabl 46.1 1.1E+02 0.0036 25.4 8.9 62 47-116 26-111 (277)
431 1y8q_B Anthracycline-, ubiquit 45.6 66 0.0023 31.0 8.2 33 50-90 17-49 (640)
432 4da9_A Short-chain dehydrogena 45.3 47 0.0016 27.7 6.6 62 47-116 26-115 (280)
433 1wma_A Carbonyl reductase [NAD 44.7 24 0.00081 28.7 4.5 93 49-149 3-139 (276)
434 2vn8_A Reticulon-4-interacting 44.6 64 0.0022 28.0 7.6 85 47-148 181-280 (375)
435 3krt_A Crotonyl COA reductase; 44.6 37 0.0013 30.6 6.2 32 107-148 313-344 (456)
436 3l4b_C TRKA K+ channel protien 43.9 39 0.0013 26.9 5.6 82 52-148 2-99 (218)
437 3jyo_A Quinate/shikimate dehyd 43.9 8 0.00027 33.2 1.4 46 37-90 114-159 (283)
438 3ic5_A Putative saccharopine d 43.8 20 0.00068 25.0 3.4 59 49-115 4-76 (118)
439 4e4y_A Short chain dehydrogena 43.7 52 0.0018 26.5 6.4 94 49-149 3-127 (244)
440 3i83_A 2-dehydropantoate 2-red 43.5 36 0.0012 29.1 5.7 84 51-149 3-106 (320)
441 2zwa_A Leucine carboxyl methyl 42.9 51 0.0017 31.6 7.1 54 92-148 189-254 (695)
442 3rkr_A Short chain oxidoreduct 42.6 33 0.0011 28.1 5.1 62 47-116 26-114 (262)
443 1y8q_A Ubiquitin-like 1 activa 42.5 23 0.00079 31.2 4.3 33 50-90 36-68 (346)
444 3ppi_A 3-hydroxyacyl-COA dehyd 42.1 57 0.002 26.9 6.6 60 48-115 28-110 (281)
445 4dqx_A Probable oxidoreductase 41.8 55 0.0019 27.2 6.4 62 47-116 24-109 (277)
446 1tt5_B Ubiquitin-activating en 41.4 31 0.0011 31.5 5.0 33 50-90 40-72 (434)
447 2vhw_A Alanine dehydrogenase; 41.3 8.7 0.0003 34.3 1.3 89 48-148 166-268 (377)
448 3p2y_A Alanine dehydrogenase/p 41.2 7.8 0.00027 35.0 0.9 33 49-90 183-215 (381)
449 2cdc_A Glucose dehydrogenase g 41.1 64 0.0022 28.0 7.0 78 50-149 181-279 (366)
450 3ggo_A Prephenate dehydrogenas 40.1 92 0.0032 26.6 7.8 80 51-146 34-126 (314)
451 3gpi_A NAD-dependent epimerase 39.7 1.4E+02 0.0047 24.3 8.6 56 50-114 3-69 (286)
452 4dio_A NAD(P) transhydrogenase 39.5 9.1 0.00031 34.8 1.1 33 49-90 189-221 (405)
453 3h2s_A Putative NADH-flavin re 39.5 1.3E+02 0.0045 23.3 8.4 41 75-116 18-70 (224)
454 1l7d_A Nicotinamide nucleotide 38.9 11 0.00039 33.5 1.7 34 48-90 170-203 (384)
455 3g17_A Similar to 2-dehydropan 38.8 63 0.0022 27.1 6.4 83 51-148 3-96 (294)
456 3g2e_A OORC subunit of 2-oxogl 38.8 1E+02 0.0034 24.5 7.3 33 107-150 69-101 (194)
457 4e6p_A Probable sorbitol dehyd 38.5 79 0.0027 25.7 6.9 61 48-116 6-90 (259)
458 3hn7_A UDP-N-acetylmuramate-L- 38.5 48 0.0016 30.8 6.0 60 48-117 17-89 (524)
459 2eez_A Alanine dehydrogenase; 38.2 14 0.00047 32.8 2.1 88 48-148 164-266 (369)
460 3g0o_A 3-hydroxyisobutyrate de 38.2 84 0.0029 26.4 7.1 81 51-147 8-101 (303)
461 4e2x_A TCAB9; kijanose, tetron 37.9 79 0.0027 27.8 7.1 85 48-151 317-413 (416)
462 3ioy_A Short-chain dehydrogena 37.3 1.2E+02 0.0042 25.6 8.1 61 48-116 6-95 (319)
463 3on3_A Keto/oxoacid ferredoxin 37.1 75 0.0026 25.0 6.2 33 107-150 69-101 (183)
464 4b79_A PA4098, probable short- 37.1 28 0.00094 29.1 3.7 62 46-115 7-85 (242)
465 3nx4_A Putative oxidoreductase 36.3 1.1E+02 0.0039 25.6 7.7 79 52-149 149-242 (324)
466 1bg6_A N-(1-D-carboxylethyl)-L 36.3 87 0.003 26.6 7.0 82 51-147 5-108 (359)
467 4dyv_A Short-chain dehydrogena 36.0 45 0.0015 27.8 4.9 61 48-116 26-110 (272)
468 1g0o_A Trihydroxynaphthalene r 35.9 54 0.0018 27.2 5.4 94 48-149 27-164 (283)
469 1ks9_A KPA reductase;, 2-dehyd 35.8 92 0.0031 25.5 6.9 82 52-148 2-97 (291)
470 2cf5_A Atccad5, CAD, cinnamyl 35.5 39 0.0013 29.3 4.6 86 45-149 175-276 (357)
471 2aef_A Calcium-gated potassium 35.2 55 0.0019 26.3 5.2 84 49-148 8-105 (234)
472 1wg8_A Predicted S-adenosylmet 35.1 14 0.00048 32.0 1.5 25 126-150 211-235 (285)
473 3t7c_A Carveol dehydrogenase; 35.0 1.5E+02 0.0053 24.6 8.3 63 46-116 24-125 (299)
474 3h5n_A MCCB protein; ubiquitin 35.0 56 0.0019 28.7 5.6 33 50-90 118-150 (353)
475 2a4k_A 3-oxoacyl-[acyl carrier 34.9 61 0.0021 26.7 5.6 61 48-116 4-88 (263)
476 3tzq_B Short-chain type dehydr 34.9 73 0.0025 26.2 6.1 62 47-116 8-93 (271)
477 3orf_A Dihydropteridine reduct 34.7 78 0.0027 25.7 6.2 93 49-149 21-145 (251)
478 3sx2_A Putative 3-ketoacyl-(ac 34.6 1E+02 0.0034 25.3 6.9 62 47-116 10-110 (278)
479 3d4o_A Dipicolinate synthase s 34.5 1.5E+02 0.0052 24.8 8.2 84 45-148 150-244 (293)
480 3d0o_A L-LDH 1, L-lactate dehy 34.2 2.2E+02 0.0075 24.3 9.3 89 49-149 5-124 (317)
481 4a0s_A Octenoyl-COA reductase/ 33.9 40 0.0014 30.2 4.5 32 107-148 305-336 (447)
482 2nvu_B Maltose binding protein 33.5 35 0.0012 33.4 4.3 34 49-90 410-443 (805)
483 1yqd_A Sinapyl alcohol dehydro 33.5 45 0.0015 29.0 4.7 83 46-148 183-282 (366)
484 3tfo_A Putative 3-oxoacyl-(acy 33.3 1.1E+02 0.0038 25.1 7.0 60 49-116 3-89 (264)
485 2pd4_A Enoyl-[acyl-carrier-pro 33.2 88 0.003 25.7 6.3 61 48-116 4-92 (275)
486 2hmt_A YUAA protein; RCK, KTN, 32.8 91 0.0031 22.2 5.7 57 50-115 6-77 (144)
487 3tka_A Ribosomal RNA small sub 32.5 16 0.00055 32.5 1.5 25 126-150 252-276 (347)
488 3ew7_A LMO0794 protein; Q8Y8U8 32.5 1.7E+02 0.0057 22.4 8.0 55 52-116 2-69 (221)
489 1xa0_A Putative NADPH dependen 32.5 45 0.0015 28.3 4.4 85 45-148 144-246 (328)
490 4g81_D Putative hexonate dehyd 32.0 77 0.0026 26.5 5.7 62 47-116 6-94 (255)
491 3d1l_A Putative NADP oxidoredu 31.9 1.8E+02 0.0062 23.5 8.1 82 50-148 10-102 (266)
492 3icc_A Putative 3-oxoacyl-(acy 31.9 1.4E+02 0.0049 23.7 7.3 95 48-150 5-149 (255)
493 2h7i_A Enoyl-[acyl-carrier-pro 31.9 94 0.0032 25.4 6.3 62 48-116 5-95 (269)
494 2qrv_B DNA (cytosine-5)-methyl 31.9 54 0.0018 27.4 4.6 50 50-114 33-87 (230)
495 4fs3_A Enoyl-[acyl-carrier-pro 31.6 2.1E+02 0.0071 23.2 9.9 61 47-115 3-93 (256)
496 2rir_A Dipicolinate synthase, 31.5 1.2E+02 0.0042 25.4 7.1 84 45-148 152-246 (300)
497 3lk7_A UDP-N-acetylmuramoylala 31.2 1.2E+02 0.0043 27.2 7.4 61 48-117 7-81 (451)
498 3qha_A Putative oxidoreductase 31.0 64 0.0022 27.2 5.1 80 51-148 16-105 (296)
499 4egf_A L-xylulose reductase; s 30.9 1.2E+02 0.0042 24.7 6.9 61 48-116 18-106 (266)
500 3c24_A Putative oxidoreductase 30.8 1.1E+02 0.0037 25.4 6.5 81 51-146 12-99 (286)
No 1
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.94 E-value=6.2e-27 Score=215.21 Aligned_cols=162 Identities=43% Similarity=0.697 Sum_probs=144.4
Q ss_pred ChhhHhhhhccHHHHHHHhccHHHHHHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEee
Q psy9773 10 DEEEYFESYTDLEVHKLMLDDTVRNEAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQ 89 (252)
Q Consensus 10 ~~~~yf~~y~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD 89 (252)
.++.||++|+.+.+|..|++|..|+.+|+++|.++....+|++||||||||| +| ++++++.|+++|+|||
T Consensus 44 ~d~~Yf~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtG--iL--------s~~Aa~aGA~~V~ave 113 (376)
T 4hc4_A 44 RDQLYYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTG--IL--------SIFCAQAGARRVYAVE 113 (376)
T ss_dssp -----CCCHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHTTCEEEEETCTTS--HH--------HHHHHHTTCSEEEEEE
T ss_pred chhhhhhhccCcHHHHHHhCCHHHHHHHHHHHHhCHHhcCCCEEEEeCCCcc--HH--------HHHHHHhCCCEEEEEe
Confidence 4567999999999999999999999999999988777789999999999999 99 9999999999999999
Q ss_pred C-----------------CceEEEEccccccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccccc
Q psy9773 90 Y-----------------LILEVIQNKIENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 90 ~-----------------~~i~~~~~d~~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
. .+|+++++++.++.++.+||+|||.++.+.+.++..+..++....++|+|||++++...++|
T Consensus 114 ~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~atly 193 (376)
T 4hc4_A 114 ASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELF 193 (376)
T ss_dssp CSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEEEEE
T ss_pred ChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCccceEE
Confidence 8 57999999999999899999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhH---HHHhhhh---hCCccccchhHHh
Q psy9773 153 SAPSYSPEI---FKFWENI---AGEEEKKEEDEIE 181 (252)
Q Consensus 153 ~~~~~~~~~---~~~w~~~---~g~~~~~~~~~~~ 181 (252)
.+++....+ ..+|.++ |||+++++.....
T Consensus 194 ~apie~~~l~~~i~~w~~v~~~yGfd~s~~~~~~~ 228 (376)
T 4hc4_A 194 IVPISDQMLEWRLGFWSQVKQHYGVDMSCLEGFAT 228 (376)
T ss_dssp EEEECCHHHHHHHHGGGGHHHHHSCCCGGGHHHHH
T ss_pred EEEeccchhhhhhcchhccccccCcCchhhhhhhh
Confidence 999887544 5678665 9999999976543
No 2
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.88 E-value=1.3e-22 Score=184.52 Aligned_cols=168 Identities=38% Similarity=0.694 Sum_probs=136.2
Q ss_pred CCCChhhHhhhhccHHHHHHHhccHHHHHHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEE
Q psy9773 7 KDHDEEEYFESYTDLEVHKLMLDDTVRNEAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHY 86 (252)
Q Consensus 7 ~~~~~~~yf~~y~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~ 86 (252)
...+.+.||++|+.+..+..++++..+...|.+++.......++.+|||||||+| .+ +..+++.|+.+|+
T Consensus 24 ~~~~~~~yf~~y~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDvGcG~G--~~--------~~~la~~g~~~v~ 93 (349)
T 3q7e_A 24 DMTSKDYYFDSYAHFGIHEELLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTG--IL--------CMFAAKAGARKVI 93 (349)
T ss_dssp -------------CCHHHHHHHHCHHHHHHHHHHHHTCHHHHTTCEEEEESCTTS--HH--------HHHHHHTTCSEEE
T ss_pred ccchHHHHHHhhhhhHHHHHHhccHHHHHHHHHHHHhccccCCCCEEEEEeccch--HH--------HHHHHHCCCCEEE
Confidence 3456778999999999999999999999999999987666778999999999999 77 7788888877999
Q ss_pred EeeC-----------------CceEEEEccccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 87 APQY-----------------LILEVIQNKIENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 87 gvD~-----------------~~i~~~~~d~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
|+|+ .+++++++|+.+++++ ++||+|++.++.+++.+...+..++..+.++|+|||++++..
T Consensus 94 gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 94 GIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp EEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred EECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 9999 3499999999999887 899999999888888888899999999999999999999998
Q ss_pred cccccCCCCChhH----HHHhhhhhCCccccchhHHhhhh
Q psy9773 149 CILHSAPSYSPEI----FKFWENIAGEEEKKEEDEIEEEE 184 (252)
Q Consensus 149 ~~~~~~~~~~~~~----~~~w~~~~g~~~~~~~~~~~~~~ 184 (252)
...+..+.....+ ..+|.+++||+++++......+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~w~~~~G~d~~~~~~~~~~~p 213 (349)
T 3q7e_A 174 ATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEP 213 (349)
T ss_dssp EEEEEEEECCHHHHHHHTGGGGCBTTBCCGGGHHHHHTSC
T ss_pred ceEEEeeecChhhhhhhhcccccccCcchHHHhHhhhcCc
Confidence 8877777766554 56899999999999987766554
No 3
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.87 E-value=1.8e-21 Score=178.74 Aligned_cols=165 Identities=45% Similarity=0.680 Sum_probs=140.4
Q ss_pred CCChhhHhhhhccHHHHHHHhccHHHHHHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEE
Q psy9773 8 DHDEEEYFESYTDLEVHKLMLDDTVRNEAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYA 87 (252)
Q Consensus 8 ~~~~~~yf~~y~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~g 87 (252)
..+.+.||+.|+.+..+..|+++..++..|.+++.......++.+|||||||+| .+ +..+++.|+++|+|
T Consensus 22 ~~~~~~yf~~ya~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG--~l--------s~~la~~g~~~V~g 91 (376)
T 3r0q_C 22 EVDYAQYFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSG--IL--------AIWSAQAGARKVYA 91 (376)
T ss_dssp ------CTTGGGCHHHHHHHHTCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTT--HH--------HHHHHHTTCSEEEE
T ss_pred cccHHHHHHHHHHhHHHHHHhcChHHHHHHHHHHHhccccCCCCEEEEeccCcC--HH--------HHHHHhcCCCEEEE
Confidence 456678999999999999999999999999999988888889999999999999 77 78888888779999
Q ss_pred eeC-----------------CceEEEEccccccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 88 PQY-----------------LILEVIQNKIENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 88 vD~-----------------~~i~~~~~d~~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+|+ .+++++++|+.+++++++||+|++.++.+++.+...+..++..+.++|+|||+|++....
T Consensus 92 vD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 92 VEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp EESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred EccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 999 348999999999988889999999888888888888999999999999999999999988
Q ss_pred cccCCCCChhHH--------------HHh---hhhhCCccccchhHHhh
Q psy9773 151 LHSAPSYSPEIF--------------KFW---ENIAGEEEKKEEDEIEE 182 (252)
Q Consensus 151 ~~~~~~~~~~~~--------------~~w---~~~~g~~~~~~~~~~~~ 182 (252)
.+..+.....+. .+| .+.+|++++.+...+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~W~~fw~~~~~~~G~d~~~~~~~~~~ 220 (376)
T 3r0q_C 172 MWLAPIKSNIADRKRNDFDGAMADWHNFSDEIKSYYGVDMGVLTKPFAE 220 (376)
T ss_dssp EEEEEECCTHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCGGGHHHHHH
T ss_pred EEEEeecchHHhhhhhhhhhhhhhhhhhhhccCccccCChHHHHhhhhh
Confidence 777776654431 677 78899999999987543
No 4
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.86 E-value=9.7e-22 Score=177.25 Aligned_cols=162 Identities=40% Similarity=0.715 Sum_probs=138.7
Q ss_pred hHhhhhccHHHHHHHhccHHHHHHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--
Q psy9773 13 EYFESYTDLEVHKLMLDDTVRNEAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-- 90 (252)
Q Consensus 13 ~yf~~y~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-- 90 (252)
.||++|+.+.+|..|+++..++..|.+++.......++.+|||+|||+| .+ +..+++.|+.+|+|+|+
T Consensus 2 ~Yf~~y~~~~~~~~ml~d~~r~~~y~~ai~~~~~~~~~~~VLDiGcGtG--~l--------s~~la~~g~~~v~~vD~s~ 71 (328)
T 1g6q_1 2 YYFDSYDHYGIHEEMLQDTVRTLSYRNAIIQNKDLFKDKIVLDVGCGTG--IL--------SMFAAKHGAKHVIGVDMSS 71 (328)
T ss_dssp CCCCCCCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHTTCEEEEETCTTS--HH--------HHHHHHTCCSEEEEEESST
T ss_pred chhhhhcCchHHHHHhcCHHHHHHHHHHHHhhHhhcCCCEEEEecCccH--HH--------HHHHHHCCCCEEEEEChHH
Confidence 5899999999999999999999999999876556678899999999999 77 78888887778999999
Q ss_pred ---------------CceEEEEccccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccccccC
Q psy9773 91 ---------------LILEVIQNKIENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCILHSA 154 (252)
Q Consensus 91 ---------------~~i~~~~~d~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~~~~~ 154 (252)
.+++++++|+.+++++ ++||+|++.++.+++.+...+..++..+.++|+|||++++...+.+..
T Consensus 72 ~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~ 151 (328)
T 1g6q_1 72 IIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPDKCSIHLA 151 (328)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESCEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEeeceEEEE
Confidence 3589999999999877 889999999887778788889999999999999999999888776666
Q ss_pred CCCChhH----HHHhhhhhCCccccchhHHhhhh
Q psy9773 155 PSYSPEI----FKFWENIAGEEEKKEEDEIEEEE 184 (252)
Q Consensus 155 ~~~~~~~----~~~w~~~~g~~~~~~~~~~~~~~ 184 (252)
+.....+ ..+|.+.+||+++.+.......|
T Consensus 152 ~~~~~~~~~~~~~~w~~~~gf~~~~~~~~~~~~~ 185 (328)
T 1g6q_1 152 GLEDSQYKDEKLNYWQDVYGFDYSPFVPLVLHEP 185 (328)
T ss_dssp EECCHHHHHHHHHHTTCBTTBCCTTHHHHHTTSC
T ss_pred EecCchhhhhhhcccccccCcChHHHhhhhhcCC
Confidence 6555433 56799999999999887765443
No 5
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.85 E-value=8e-21 Score=172.18 Aligned_cols=164 Identities=40% Similarity=0.725 Sum_probs=137.6
Q ss_pred hhhHhhhhccHHHHHHHhccHHHHHHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 11 EEEYFESYTDLEVHKLMLDDTVRNEAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 11 ~~~yf~~y~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
+..||+.|....++..|+++..++..|.+++.......++.+|||||||+| .+ +..+++.|+.+|+|+|+
T Consensus 26 d~~Y~~~y~~~~~~~~ml~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG--~l--------s~~la~~g~~~v~gvD~ 95 (340)
T 2fyt_A 26 DGVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTG--IL--------SMFAAKAGAKKVLGVDQ 95 (340)
T ss_dssp ----CCGGGSHHHHHHHHTCHHHHHHHHHHHHHCGGGTTTCEEEEETCTTS--HH--------HHHHHHTTCSEEEEEES
T ss_pred hhhHHHhhcchhHHHHHhcCHHHHHHHHHHHHhhhhhcCCCEEEEeeccCc--HH--------HHHHHHcCCCEEEEECh
Confidence 345999999999999999999999999999988777788999999999999 77 77888887778999999
Q ss_pred -----------------CceEEEEccccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccccc
Q psy9773 91 -----------------LILEVIQNKIENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 91 -----------------~~i~~~~~d~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
.++.++++|+.+++++ ++||+|++.++.+.+.+...+..++..+.++|+|||++++...+.+
T Consensus 96 s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~ 175 (340)
T 2fyt_A 96 SEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTIS 175 (340)
T ss_dssp STHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcccceEE
Confidence 3689999999999877 8899999988777777888899999999999999999998877766
Q ss_pred cCCCCChhH----HHHhhhhhCCccccchhHHhhhh
Q psy9773 153 SAPSYSPEI----FKFWENIAGEEEKKEEDEIEEEE 184 (252)
Q Consensus 153 ~~~~~~~~~----~~~w~~~~g~~~~~~~~~~~~~~ 184 (252)
..+.....+ ..+|.+.+||+++.+.+.....+
T Consensus 176 ~~~~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~ 211 (340)
T 2fyt_A 176 LVAVSDVNKHADRIAFWDDVYGFKMSCMKKAVIPEA 211 (340)
T ss_dssp EEEECCHHHHHHHTGGGGCBTTBCCGGGHHHHTTBC
T ss_pred EEEecchhHhhhhhcccccccCcChHHHHHhhhcCc
Confidence 665544332 56799999999998887654443
No 6
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.80 E-value=7e-19 Score=159.72 Aligned_cols=161 Identities=35% Similarity=0.548 Sum_probs=132.9
Q ss_pred CChhhHhhhhccHHHHHHHhccHHHHHHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEe
Q psy9773 9 HDEEEYFESYTDLEVHKLMLDDTVRNEAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAP 88 (252)
Q Consensus 9 ~~~~~yf~~y~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gv 88 (252)
.+.+.||+.|..+..+..|+++..+...|.+++.......++.+|||||||+| .+ +..+++.|+.+|+|+
T Consensus 10 ~~~~~y~~~y~~~~~~~~ml~d~~r~~~y~~~i~~~l~~~~~~~VLDiGcGtG--~l--------s~~la~~g~~~V~~v 79 (348)
T 2y1w_A 10 SSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSG--IL--------SFFAAQAGARKIYAV 79 (348)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTCHHHHHHHHHHHHHTGGGTTTCEEEEETCTTS--HH--------HHHHHHTTCSEEEEE
T ss_pred ccHHHHHHHHhhhhHHHHHhcchHHHHHHHHHHHhccccCCcCEEEEcCCCcc--HH--------HHHHHhCCCCEEEEE
Confidence 34567999999999999999999999999999988777778999999999999 77 778888777789999
Q ss_pred eC-----------------CceEEEEccccccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecccc
Q psy9773 89 QY-----------------LILEVIQNKIENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCIL 151 (252)
Q Consensus 89 D~-----------------~~i~~~~~d~~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~~ 151 (252)
|+ .+++++.+|+.+++.+++||+|++.++++++.+. .+...+..+.++|+|||++++...+.
T Consensus 80 D~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~~~~~~-~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (348)
T 2y1w_A 80 EASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNE-RMLESYLHAKKYLKPSGNMFPTIGDV 158 (348)
T ss_dssp ECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBTTBTTT-SHHHHHHHGGGGEEEEEEEESCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchhcCChH-HHHHHHHHHHhhcCCCeEEEEecCcE
Confidence 99 3689999999998777889999998887766544 45667778899999999999988877
Q ss_pred ccCCCCChhH-------HHHh--hhhhCCccccchhHH
Q psy9773 152 HSAPSYSPEI-------FKFW--ENIAGEEEKKEEDEI 180 (252)
Q Consensus 152 ~~~~~~~~~~-------~~~w--~~~~g~~~~~~~~~~ 180 (252)
+..+.....+ ..+| ..++|++++.+....
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~w~~~~~~g~d~~~l~~~~ 196 (348)
T 2y1w_A 159 HLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAA 196 (348)
T ss_dssp EEEEECCHHHHHHHHHHHGGGCCSCBTTBCCGGGHHHH
T ss_pred EEEEecchHHhhhhccccCcccccccCcccHHHhhhHH
Confidence 7666554432 3456 467899998887654
No 7
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.67 E-value=1.3e-16 Score=136.97 Aligned_cols=132 Identities=19% Similarity=0.228 Sum_probs=85.0
Q ss_pred CCccccCCCChhhHhhhhccHHHHHHHhccHHHHHHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc
Q psy9773 1 MDMEVVKDHDEEEYFESYTDLEVHKLMLDDTVRNEAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV 80 (252)
Q Consensus 1 ~~m~~~~~~~~~~yf~~y~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~ 80 (252)
|.|... .|+...||+.|.........+. .......+.......++.+|||+|||+| .+ +..++..
T Consensus 1 M~m~~~-~y~~~~~~~~y~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~vLD~GcG~G--~~--------~~~l~~~ 65 (253)
T 3g5l_A 1 MSLKEN-KYDDKHFFEQYSQMPRSKEGLK----AAGEWHELKKMLPDFNQKTVLDLGCGFG--WH--------CIYAAEH 65 (253)
T ss_dssp -------------------------CHHH----HHHHHHHHHTTCCCCTTCEEEEETCTTC--HH--------HHHHHHT
T ss_pred CCcccc-ccccHHHHHHHHHhhccccccc----chhhHHHHHHhhhccCCCEEEEECCCCC--HH--------HHHHHHc
Confidence 555542 3666778888877543322221 1222333444455568899999999999 66 6777777
Q ss_pred CCCcEEEeeC--------------CceEEEEccccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEE
Q psy9773 81 HPLDHYAPQY--------------LILEVIQNKIENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMY 145 (252)
Q Consensus 81 g~~~v~gvD~--------------~~i~~~~~d~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv 145 (252)
++.+|+|+|+ .++.++++|+..++++ ++||+|++..+++++ .++..+|..+.++|+|||+|+
T Consensus 66 ~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~ 142 (253)
T 3g5l_A 66 GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI---ASFDDICKKVYINLKSSGSFI 142 (253)
T ss_dssp TCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEE
T ss_pred CCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh---hhHHHHHHHHHHHcCCCcEEE
Confidence 7668999999 4789999999998876 899999998887776 678899999999999999999
Q ss_pred eeccc
Q psy9773 146 PYKCI 150 (252)
Q Consensus 146 ~~~~~ 150 (252)
+..+.
T Consensus 143 ~~~~~ 147 (253)
T 3g5l_A 143 FSVEH 147 (253)
T ss_dssp EEEEC
T ss_pred EEeCC
Confidence 98543
No 8
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.67 E-value=1.7e-16 Score=150.17 Aligned_cols=157 Identities=36% Similarity=0.566 Sum_probs=124.9
Q ss_pred hHhhhhccHHHHHHHhccHHHHHHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--
Q psy9773 13 EYFESYTDLEVHKLMLDDTVRNEAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-- 90 (252)
Q Consensus 13 ~yf~~y~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-- 90 (252)
.|++.|.....+..++.+..++..+...+.......++.+|||||||+| .+ +..+++.++.+|+|+|+
T Consensus 122 ~~~~~y~~~~~~~~~L~d~~~t~~~~~~il~~l~~~~~~~VLDiGcGtG--~l--------a~~la~~~~~~V~gvD~s~ 191 (480)
T 3b3j_A 122 QYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSG--IL--------SFFAAQAGARKIYAVEAST 191 (480)
T ss_dssp EEEEGGGCSCHHHHHHHHHHHHHHHHHHHHHTGGGTTTCEEEEESCSTT--HH--------HHHHHHTTCSEEEEEECHH
T ss_pred hHHHHHhhhccchhhhcChHhHHHHHHHHHHhhhhcCCCEEEEecCccc--HH--------HHHHHHcCCCEEEEEEcHH
Confidence 4666777666678899999999999998887666678899999999999 77 77777777778999999
Q ss_pred ---------------CceEEEEccccccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccccccCC
Q psy9773 91 ---------------LILEVIQNKIENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCILHSAP 155 (252)
Q Consensus 91 ---------------~~i~~~~~d~~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~~~~~~ 155 (252)
.+++++++|+.+++++++||+|++.++++++.+. .....+..+.++|+|||++++.....+..+
T Consensus 192 ~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~~~~~e-~~~~~l~~~~~~LkpgG~li~~~~~~~~~p 270 (480)
T 3b3j_A 192 MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNE-RMLESYLHAKKYLKPSGNMFPTIGDVHLAP 270 (480)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHHHHTCH-HHHHHHHHGGGGEEEEEEEESCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCchHhcCcH-HHHHHHHHHHHhcCCCCEEEEEeceeeeec
Confidence 4689999999998777889999998877766555 455667788999999999999887777666
Q ss_pred CCChhH-------HHHh--hhhhCCccccchhHH
Q psy9773 156 SYSPEI-------FKFW--ENIAGEEEKKEEDEI 180 (252)
Q Consensus 156 ~~~~~~-------~~~w--~~~~g~~~~~~~~~~ 180 (252)
.....+ ..+| ..++|++++.+....
T Consensus 271 i~~~~l~~e~~~~~~~w~~~~~~g~dl~~l~~~~ 304 (480)
T 3b3j_A 271 FTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAA 304 (480)
T ss_dssp ECCHHHHHHHHHHHHHHHSSCBTTBCCGGGHHHH
T ss_pred cCchHHHHHHhhccCccccccCCCcChhhhhhHH
Confidence 555432 3456 367899998887653
No 9
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.60 E-value=9.8e-15 Score=125.16 Aligned_cols=100 Identities=19% Similarity=0.198 Sum_probs=81.6
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEc
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQN 98 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~ 98 (252)
....+.......++.+|||+|||+| .+ +..++..+..+|+|+|+ .++.++++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G--~~--------~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 103 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTG--GQ--------TLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITG 103 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTS--HH--------HHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCC--HH--------HHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 3344444346678899999999999 66 66777765458999999 23999999
Q ss_pred cccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 99 KIENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 99 d~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+..++++ ++||+|++..+++++ ++..++..+.++|+|||++++..+.
T Consensus 104 d~~~~~~~~~~fD~v~~~~~l~~~----~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 104 SMDNLPFQNEELDLIWSEGAIYNI----GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp CTTSCSSCTTCEEEEEEESCSCCC----CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ChhhCCCCCCCEEEEEecChHhhc----CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 99998876 899999998876665 5788999999999999999998865
No 10
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.59 E-value=1.1e-14 Score=126.06 Aligned_cols=100 Identities=18% Similarity=0.188 Sum_probs=81.7
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEc
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQN 98 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~ 98 (252)
....+.......++.+|||||||+| .+ +..++..+..+|+|+|+ .++.++++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G--~~--------~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 103 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTG--GQ--------TMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVG 103 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTC--HH--------HHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCC--HH--------HHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEc
Confidence 3334433344678899999999999 66 66777765568999999 34999999
Q ss_pred cccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 99 KIENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 99 d~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+.+++++ ++||+|++..+++++ ++..++..+.++|+|||++++..+.
T Consensus 104 d~~~~~~~~~~fD~i~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 104 SMDDLPFRNEELDLIWSEGAIYNI----GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp CTTSCCCCTTCEEEEEESSCGGGT----CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred ChhhCCCCCCCEEEEEEcCCceec----CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 99998876 889999998887766 5788999999999999999998865
No 11
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.57 E-value=9.1e-15 Score=123.83 Aligned_cols=90 Identities=17% Similarity=0.165 Sum_probs=76.5
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------C-ceEEEEccccccCCCCceeEEE
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------L-ILEVIQNKIENVELPEKVDIIV 113 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~-~i~~~~~d~~~~~~~~~fDlIv 113 (252)
..++.+|||||||+| .+ +..++..++ +|+|+|+ . ++.++++|+.++..+++||+|+
T Consensus 40 ~~~~~~vLDiGcG~G--~~--------~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~ 108 (250)
T 2p7i_A 40 FFRPGNLLELGSFKG--DF--------TSRLQEHFN-DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIV 108 (250)
T ss_dssp GCCSSCEEEESCTTS--HH--------HHHHTTTCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEE
T ss_pred hcCCCcEEEECCCCC--HH--------HHHHHHhCC-cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEE
Confidence 357789999999999 66 677777764 7999999 2 7899999999885458899999
Q ss_pred ecccccccCChhhHHHHHHHHh-ccccCCeEEEeeccc
Q psy9773 114 SEWMGFYLLHESMIDSVIFARD-KFLKPEGVMYPYKCI 150 (252)
Q Consensus 114 ~~~~~~~l~~~~~~~~~l~~l~-~~LkpgG~lv~~~~~ 150 (252)
+..+++++ .++..+|..+. ++|+|||++++..+.
T Consensus 109 ~~~~l~~~---~~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 109 LTHVLEHI---DDPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp EESCGGGC---SSHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EhhHHHhh---cCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 98887777 56789999999 999999999998754
No 12
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.57 E-value=8.3e-15 Score=122.62 Aligned_cols=103 Identities=16% Similarity=0.068 Sum_probs=84.5
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccc
Q psy9773 36 AYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKI 100 (252)
Q Consensus 36 ~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~ 100 (252)
.+...+.......++.+|||+|||+| .+ +..++..+ .+++|+|+ .++.++++|+
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~ 106 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAG--AF--------TEKLAPHC-KRLTVIDVMPRAIGRACQRTKRWSHISWAATDI 106 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTS--HH--------HHHHGGGE-EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCT
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCC--HH--------HHHHHHcC-CEEEEEECCHHHHHHHHHhcccCCCeEEEEcch
Confidence 34444443355667889999999999 66 66777765 47999999 4689999999
Q ss_pred cccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 101 ENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 101 ~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+++.+++||+|++..+++++.....+..++..+.++|+|||+|++..+
T Consensus 107 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 107 LQFSTAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp TTCCCSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhCCCCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 9998568999999999888887666678899999999999999999764
No 13
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.56 E-value=2.2e-14 Score=121.48 Aligned_cols=95 Identities=20% Similarity=0.257 Sum_probs=77.5
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC---------------CceEEEEccccccCCCCc
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY---------------LILEVIQNKIENVELPEK 108 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~---------------~~i~~~~~d~~~~~~~~~ 108 (252)
....++.+|||+|||+| .+ +..++... ..+++|+|+ .++.++++|+.+++++++
T Consensus 40 ~~~~~~~~vLDiG~G~G--~~--------~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~ 109 (234)
T 3dtn_A 40 SVDTENPDILDLGAGTG--LL--------SAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEK 109 (234)
T ss_dssp CCSCSSCEEEEETCTTS--HH--------HHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSC
T ss_pred hcCCCCCeEEEecCCCC--HH--------HHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCC
Confidence 33567899999999999 55 55666653 358999999 379999999999987789
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
||+|++..+++++ .......++..+.++|+|||++++....
T Consensus 110 fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 110 YDMVVSALSIHHL-EDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp EEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ceEEEEeCccccC-CHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 9999998887777 3334557999999999999999998754
No 14
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.55 E-value=1.5e-14 Score=122.69 Aligned_cols=93 Identities=14% Similarity=0.190 Sum_probs=77.9
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------------CceEEEEccccccCCC-Cce
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------------LILEVIQNKIENVELP-EKV 109 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------------~~i~~~~~d~~~~~~~-~~f 109 (252)
....++.+|||+|||+| .+ +..++..+..+++|+|+ .++.++++|+..++++ ++|
T Consensus 39 ~~~~~~~~vLdiG~G~G--~~--------~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 39 LPEVGGLRIVDLGCGFG--WF--------CRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp SCCCTTCEEEEETCTTC--HH--------HHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCE
T ss_pred ccccCCCEEEEEcCcCC--HH--------HHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCc
Confidence 34567899999999999 66 66677766558999999 3689999999998775 789
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+|++..+++++ .++..+|..+.++|+|||++++..+.
T Consensus 109 D~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 109 DLAYSSLALHYV---EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEEecccccc---chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 999998877766 57889999999999999999997653
No 15
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.54 E-value=1.7e-14 Score=125.88 Aligned_cols=88 Identities=17% Similarity=0.137 Sum_probs=75.1
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEccccccCCC-CceeEEEec
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENVELP-EKVDIIVSE 115 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~~~~-~~fDlIv~~ 115 (252)
..+.+|||||||+| .+ +..++..+ .+|+|+|+ .++.++++++.+++++ ++||+|+|.
T Consensus 38 ~~~~~vLDvGcGtG--~~--------~~~l~~~~-~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~ 106 (257)
T 4hg2_A 38 PARGDALDCGCGSG--QA--------SLGLAEFF-ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAA 106 (257)
T ss_dssp SCSSEEEEESCTTT--TT--------HHHHHTTC-SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEEC
T ss_pred CCCCCEEEEcCCCC--HH--------HHHHHHhC-CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEe
Confidence 45579999999999 66 67777776 57999999 6899999999999887 899999998
Q ss_pred ccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 116 WMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 116 ~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++|++ ++..++.++.|+|||||+|++....
T Consensus 107 ~~~h~~----~~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 107 QAMHWF----DLDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp SCCTTC----CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eehhHh----hHHHHHHHHHHHcCCCCEEEEEECC
Confidence 876665 5678999999999999999876643
No 16
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.54 E-value=6.3e-15 Score=142.96 Aligned_cols=124 Identities=25% Similarity=0.329 Sum_probs=103.2
Q ss_pred HhccHHHHHHHHHHHHhC--------CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC---C--cEEEeeC---
Q psy9773 27 MLDDTVRNEAYRAAICDN--------PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP---L--DHYAPQY--- 90 (252)
Q Consensus 27 ~l~~~~~~~~~~~~l~~~--------~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~---~--~v~gvD~--- 90 (252)
.-+|++++..|.++|... .....+.+|||||||+| .| +.+++++++ . +|+||+.
T Consensus 327 FEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrG--pL--------v~~al~A~a~~~~~vkVyAVEknp~ 396 (637)
T 4gqb_A 327 FEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRG--PL--------VNASLRAAKQADRRIKLYAVEKNPN 396 (637)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTS--HH--------HHHHHHHHHHTTCEEEEEEEESCHH
T ss_pred hcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCc--HH--------HHHHHHHHHhcCCCcEEEEEECCHH
Confidence 456888899999888642 23344568999999999 77 555544433 2 6899998
Q ss_pred --------------CceEEEEccccccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccccccCCC
Q psy9773 91 --------------LILEVIQNKIENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCILHSAPS 156 (252)
Q Consensus 91 --------------~~i~~~~~d~~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~~~~~~~ 156 (252)
++|+++++|++++..|.++|+||+.+|++++.++..+ .++....++|||||+++++..+.|.+++
T Consensus 397 A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~ml-evL~Ardr~LKPgGimiPs~atlyiapi 475 (637)
T 4gqb_A 397 AVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSP-ECLDGAQHFLKDDGVSIPGEYTSFLAPI 475 (637)
T ss_dssp HHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHH-HHHHHHGGGEEEEEEEESCEEEEEEEEE
T ss_pred HHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCH-HHHHHHHHhcCCCcEEccccceEEEEEe
Confidence 7899999999999999999999999999999999766 6888999999999999999999999998
Q ss_pred CChhH
Q psy9773 157 YSPEI 161 (252)
Q Consensus 157 ~~~~~ 161 (252)
....+
T Consensus 476 ~~~~l 480 (637)
T 4gqb_A 476 SSSKL 480 (637)
T ss_dssp ECHHH
T ss_pred cCHHH
Confidence 87664
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.54 E-value=1.5e-14 Score=126.37 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=75.3
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC---CCcEEEeeC------------------CceEEEEccccccC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH---PLDHYAPQY------------------LILEVIQNKIENVE 104 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g---~~~v~gvD~------------------~~i~~~~~d~~~~~ 104 (252)
...+|.+|||||||+| .+ +..+++.. ..+|+|+|+ .+++++++|+.+++
T Consensus 67 ~~~~~~~vLDlGcGtG--~~--------~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~ 136 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLG--AA--------TLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA 136 (261)
T ss_dssp HCCTTCEEEEETCTTT--HH--------HHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC
T ss_pred hCCCCCEEEEEeCCCC--HH--------HHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc
Confidence 4678999999999999 55 55555531 137999999 47899999999987
Q ss_pred CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+ +.||+|++..++++++ ..+...+|.+++++|+|||+|++....
T Consensus 137 ~-~~~d~v~~~~~l~~~~-~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 137 I-ENASMVVLNFTLQFLE-PSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp C-CSEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred c-cccccceeeeeeeecC-chhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 6 4699999988888764 346778999999999999999998754
No 18
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.53 E-value=2.2e-14 Score=119.22 Aligned_cols=90 Identities=24% Similarity=0.355 Sum_probs=74.8
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCCC-
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVELP- 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~~- 106 (252)
...++ +|||+|||+| .+ +..++..+..+++|+|+ .++.++++|+.+++++
T Consensus 41 ~~~~~-~vLdiG~G~G--~~--------~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 41 GITAG-TCIDIGSGPG--AL--------SIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp CCCEE-EEEEETCTTS--HH--------HHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred CCCCC-EEEEECCCCC--HH--------HHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 34445 9999999999 66 56666653358999999 3699999999998877
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++||+|++..+++++ .++..++..+.++|+|||++++...
T Consensus 110 ~~~D~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 110 NYADLIVSRGSVFFW---EDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp TCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccEEEECchHhhc---cCHHHHHHHHHHhCCCCCEEEEEec
Confidence 889999998887776 6788999999999999999999753
No 19
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.53 E-value=6.9e-15 Score=127.88 Aligned_cols=93 Identities=15% Similarity=0.174 Sum_probs=74.6
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC----------------------------------
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL---------------------------------- 91 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~---------------------------------- 91 (252)
...++.+|||||||+| .+ +..++..++.+|+|+|+.
T Consensus 52 ~~~~g~~vLDiGCG~G--~~--------~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~ 121 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPT--IY--------QVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNS 121 (263)
T ss_dssp TSCCEEEEEESSCTTC--CG--------GGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCG
T ss_pred CCCCCceEEEeCCCcc--HH--------HHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCC
Confidence 4567889999999999 66 666666666689999992
Q ss_pred ------------ce-EEEEcccccc-CC----CCceeEEEeccccccc-CChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 92 ------------IL-EVIQNKIENV-EL----PEKVDIIVSEWMGFYL-LHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 92 ------------~i-~~~~~d~~~~-~~----~~~fDlIv~~~~~~~l-~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
++ .++++|+... ++ .++||+|++..+++++ .+..++..++.+++++|||||+|++..
T Consensus 122 ~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 122 GRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp GGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 02 2889999884 22 2689999999988875 455688899999999999999999985
No 20
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.53 E-value=7.5e-15 Score=128.57 Aligned_cols=106 Identities=13% Similarity=0.053 Sum_probs=82.1
Q ss_pred HHHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------------Cc
Q psy9773 34 NEAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------------LI 92 (252)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------------~~ 92 (252)
...+...+.......++.+|||||||+| .+ +..++..++ +|+|+|+ .+
T Consensus 42 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G--~~--------~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~ 110 (293)
T 3thr_A 42 TAEYKAWLLGLLRQHGCHRVLDVACGTG--VD--------SIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDK 110 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETTCTTS--HH--------HHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHT
T ss_pred HHHHHHHHHHHhcccCCCEEEEecCCCC--HH--------HHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccce
Confidence 3444444443333457789999999999 66 667777765 8999999 24
Q ss_pred eEEEEccccccC---CC-CceeEEEec-ccccccCC----hhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 93 LEVIQNKIENVE---LP-EKVDIIVSE-WMGFYLLH----ESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 93 i~~~~~d~~~~~---~~-~~fDlIv~~-~~~~~l~~----~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+.+..+|+..++ ++ ++||+|+|. .+++++.. ...+..++..+.++|+|||+|++..+.
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 111 WVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp CEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 668899998876 44 899999997 67777755 345899999999999999999988754
No 21
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.52 E-value=5.2e-14 Score=120.56 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=78.6
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccc
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIEN 102 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~ 102 (252)
+.......++.+|||||||+| .+ +..++.....+|+|+|+ .++.++++|+.+
T Consensus 28 l~~~~~~~~~~~VLDiGcG~G--~~--------~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~ 97 (256)
T 1nkv_A 28 LGRVLRMKPGTRILDLGSGSG--EM--------LCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG 97 (256)
T ss_dssp HHHHTCCCTTCEEEEETCTTC--HH--------HHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred HHHhcCCCCCCEEEEECCCCC--HH--------HHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh
Confidence 333345778899999999999 55 55665542357999999 269999999999
Q ss_pred cCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 103 VELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 103 ~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+++.++||+|++..+++++ .++..+|..+.++|+|||+|++..+.
T Consensus 98 ~~~~~~fD~V~~~~~~~~~---~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 98 YVANEKCDVAACVGATWIA---GGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp CCCSSCEEEEEEESCGGGT---SSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred CCcCCCCCEEEECCChHhc---CCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 8767889999998776666 56789999999999999999998754
No 22
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.51 E-value=4.6e-14 Score=119.55 Aligned_cols=92 Identities=21% Similarity=0.210 Sum_probs=78.5
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCCCceeE
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELPEKVDI 111 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~~~fDl 111 (252)
.++.+|||+|||+| .+ +..++..+ .+++|+|+ .++.++++|+..++++++||+
T Consensus 36 ~~~~~vLdiG~G~G--~~--------~~~l~~~~-~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~ 104 (246)
T 1y8c_A 36 LVFDDYLDLACGTG--NL--------TENLCPKF-KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDL 104 (246)
T ss_dssp CCTTEEEEETCTTS--TT--------HHHHGGGS-SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEE
T ss_pred CCCCeEEEeCCCCC--HH--------HHHHHHCC-CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceE
Confidence 47789999999999 65 66667666 47999999 178999999999877788999
Q ss_pred EEecc-cccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 112 IVSEW-MGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 112 Iv~~~-~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|++.. +++++....++..+|..+.++|+|||++++..+.
T Consensus 105 v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 99987 8888766678999999999999999999986553
No 23
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.51 E-value=2.1e-14 Score=122.47 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=77.8
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------CceEEEEcccccc--CCC-CceeEE
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------LILEVIQNKIENV--ELP-EKVDII 112 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------~~i~~~~~d~~~~--~~~-~~fDlI 112 (252)
....++.+|||||||+| .+ +..++..++ +|+|+|+ .++.++.+|+.++ +++ ++||+|
T Consensus 37 ~~~~~~~~vLDiGcG~G--~~--------~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 37 PYFKGCRRVLDIGCGRG--EF--------LELCKEEGI-ESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp GGTTTCSCEEEETCTTT--HH--------HHHHHHHTC-CEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEE
T ss_pred hhhcCCCeEEEEeCCCC--HH--------HHHHHhCCC-cEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEE
Confidence 34567799999999999 66 666777764 6999999 4589999999886 555 889999
Q ss_pred EecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 113 VSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 113 v~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++..+++++. .+++..++..+.++|+|||++++..+.
T Consensus 106 ~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 106 MISHFVEHLD-PERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEESCGGGSC-GGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EECCchhhCC-cHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9988888774 336799999999999999999998764
No 24
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.51 E-value=5.8e-14 Score=116.97 Aligned_cols=94 Identities=13% Similarity=0.001 Sum_probs=77.5
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCCCCceeE
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVELPEKVDI 111 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~~~~fDl 111 (252)
....++.+|||+|||+| .+ +..++..+ .+++|+|+ .++.++++|+.++..+++||+
T Consensus 42 ~~~~~~~~vLdiG~G~G--~~--------~~~l~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~ 110 (218)
T 3ou2_A 42 RAGNIRGDVLELASGTG--YW--------TRHLSGLA-DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDA 110 (218)
T ss_dssp TTTTSCSEEEEESCTTS--HH--------HHHHHHHS-SEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEE
T ss_pred hcCCCCCeEEEECCCCC--HH--------HHHHHhcC-CeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeE
Confidence 44677789999999999 66 66677666 47999999 568999999998843489999
Q ss_pred EEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 112 IVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 112 Iv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|++..+++++.. +....+|..+.++|+|||++++....
T Consensus 111 v~~~~~l~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 111 VFFAHWLAHVPD-DRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp EEEESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEechhhcCCH-HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 999888777733 24689999999999999999998764
No 25
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.50 E-value=7.5e-14 Score=120.46 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=78.6
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCCCCceeEEEe
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVELPEKVDIIVS 114 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~~~~fDlIv~ 114 (252)
..++.+|||||||+| .+ +..++..+ .+|+|+|+ .++.++++|+..++.+++||+|+|
T Consensus 48 ~~~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 116 (263)
T 3pfg_A 48 SPKAASLLDVACGTG--MH--------LRHLADSF-GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTC 116 (263)
T ss_dssp CTTCCEEEEETCTTS--HH--------HHHHTTTS-SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEE
T ss_pred CCCCCcEEEeCCcCC--HH--------HHHHHHcC-CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEE
Confidence 346789999999999 66 66777766 47999999 578999999999887889999999
Q ss_pred cc-cccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 115 EW-MGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 115 ~~-~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.. +++++.+..++..+|..+.++|+|||+|++..
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 87 87887666788899999999999999999974
No 26
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.50 E-value=6.4e-14 Score=121.58 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=83.8
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC-----------------CceEEE
Q psy9773 35 EAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY-----------------LILEVI 96 (252)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~-----------------~~i~~~ 96 (252)
..+...+.......++.+|||||||+| .+ +..++..+ ..+++|+|+ .++.++
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G--~~--------~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~ 92 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIG--AQ--------TVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFL 92 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTS--HH--------HHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCC--HH--------HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE
Confidence 345555655566788999999999999 66 56666653 368999999 368999
Q ss_pred EccccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 97 QNKIENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 97 ~~d~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+|+..++++ ++||+|++..+++++ +++..++..+.++|+|||++++..+.
T Consensus 93 ~~d~~~~~~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 93 QANIFSLPFEDSSFDHIFVCFVLEHL---QSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp ECCGGGCCSCTTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EcccccCCCCCCCeeEEEEechhhhc---CCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 9999998876 899999998887777 56779999999999999999997643
No 27
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.50 E-value=6e-14 Score=120.88 Aligned_cols=90 Identities=19% Similarity=0.201 Sum_probs=75.9
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC-C
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP-E 107 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~-~ 107 (252)
...++.+|||||||+| .+ +..++..+ .+++|+|+ .++.++++|+..++++ +
T Consensus 34 ~~~~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~ 102 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGG--HV--------ANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDE 102 (260)
T ss_dssp TCCSCCEEEEETCTTC--HH--------HHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTT
T ss_pred CCCCCCEEEEEeCCCC--HH--------HHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCC
Confidence 3567899999999999 66 66777765 48999998 3589999999999877 8
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+||+|++..+++++ +++..+|..+.++|+|||+|++...
T Consensus 103 ~fD~V~~~~~l~~~---~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 103 RFHIVTCRIAAHHF---PNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp CEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEEEEhhhhHhc---CCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 99999998887777 5778999999999999999998754
No 28
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.50 E-value=1.2e-13 Score=119.47 Aligned_cols=101 Identities=12% Similarity=0.088 Sum_probs=81.1
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEc
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQN 98 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~ 98 (252)
+...+.......++.+|||+|||+| .+ +..+++....+|+|+|+ .++.++.+
T Consensus 49 ~~~~l~~~~~~~~~~~vLDiGcG~G--~~--------~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 118 (273)
T 3bus_A 49 LTDEMIALLDVRSGDRVLDVGCGIG--KP--------AVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYA 118 (273)
T ss_dssp HHHHHHHHSCCCTTCEEEEESCTTS--HH--------HHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCC--HH--------HHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC
Confidence 3344444456678899999999999 55 55666543368999999 25999999
Q ss_pred cccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 99 KIENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 99 d~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+.+++++ ++||+|++..+++++ ++...+|..+.++|+|||++++....
T Consensus 119 d~~~~~~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 119 DAMDLPFEDASFDAVWALESLHHM---PDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp CTTSCCSCTTCEEEEEEESCTTTS---SCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ccccCCCCCCCccEEEEechhhhC---CCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 99998877 789999998776666 66789999999999999999988754
No 29
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.50 E-value=1e-13 Score=118.45 Aligned_cols=100 Identities=18% Similarity=0.226 Sum_probs=80.8
Q ss_pred HHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEcccccc
Q psy9773 39 AAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIENV 103 (252)
Q Consensus 39 ~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~~ 103 (252)
..+.......++.+|||||||+| .+ +..++..+..+++++|+ .++.++++|+..+
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G--~~--------~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~ 152 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIG--RI--------TKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA 152 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTT--HH--------HHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC
T ss_pred HHHHHhhcccCCCEEEEECCCcC--HH--------HHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHC
Confidence 33444445567899999999999 66 66666655567999998 3689999999998
Q ss_pred CCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 ELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 ~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+++ ++||+|++..+++++.. .++..+|..+.++|+|||+|++..+
T Consensus 153 ~~~~~~fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 153 TLPPNTYDLIVIQWTAIYLTD-ADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp CCCSSCEEEEEEESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCeEEEEEcchhhhCCH-HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 776 78999999888777643 4688999999999999999999875
No 30
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.49 E-value=3.7e-14 Score=120.35 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=76.3
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------------CceEEEEccccccCCC-CceeE
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------------LILEVIQNKIENVELP-EKVDI 111 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------------~~i~~~~~d~~~~~~~-~~fDl 111 (252)
..++.+|||+|||+| .+ +..++..+ .+++|+|+ .++.++++|+..++++ ++||+
T Consensus 51 ~~~~~~vLDiG~G~G--~~--------~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 119 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDG--YG--------TYKLSRTG-YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEA 119 (242)
T ss_dssp SCTTCEEEEETCTTS--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEE
T ss_pred cCCCCeEEEEcCCCC--HH--------HHHHHHcC-CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccE
Confidence 457889999999999 66 66777776 47999999 4789999999999876 89999
Q ss_pred EEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 112 IVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 112 Iv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
|++..+++++ .++..++..+.++|+|||++++...
T Consensus 120 v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 120 IMAINSLEWT---EEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp EEEESCTTSS---SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcChHhhc---cCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 9998776665 6778999999999999999999874
No 31
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.49 E-value=9.3e-14 Score=117.74 Aligned_cols=92 Identities=21% Similarity=0.251 Sum_probs=76.9
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCCCcee
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELPEKVD 110 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~~~fD 110 (252)
..++.+|||+|||+| .+ +..++.. .+++|+|+ .++.++++|+..++.+++||
T Consensus 31 ~~~~~~vLdiG~G~G--~~--------~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD 98 (243)
T 3d2l_A 31 VEPGKRIADIGCGTG--TA--------TLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVD 98 (243)
T ss_dssp SCTTCEEEEESCTTC--HH--------HHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEE
T ss_pred cCCCCeEEEecCCCC--HH--------HHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcC
Confidence 356789999999999 66 5566655 57999999 36899999999987778999
Q ss_pred EEEecc-cccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 111 IIVSEW-MGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 111 lIv~~~-~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+|++.. +++++....++..++..+.++|+|||++++..+.
T Consensus 99 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 99 AITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 999975 6777767778899999999999999999986543
No 32
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.49 E-value=3.4e-14 Score=118.54 Aligned_cols=93 Identities=18% Similarity=0.167 Sum_probs=78.0
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEccccccCCCCceeEEEe
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENVELPEKVDIIVS 114 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~~~~~~fDlIv~ 114 (252)
...++.+|||+|||+| .+ +..++..+ .+++|+|+ .++.++.+|+..++..++||+|++
T Consensus 40 ~~~~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~ 108 (211)
T 3e23_A 40 ELPAGAKILELGCGAG--YQ--------AEAMLAAG-FDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWA 108 (211)
T ss_dssp TSCTTCEEEESSCTTS--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEE
T ss_pred hcCCCCcEEEECCCCC--HH--------HHHHHHcC-CeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEe
Confidence 4567899999999999 66 66777766 47999999 267899999999885589999999
Q ss_pred cccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 115 EWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 115 ~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
..+++++. ..++..+|..+.++|+|||++++..+.
T Consensus 109 ~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 109 HACLLHVP-RDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp CSCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCchhhcC-HHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 88877764 337889999999999999999998653
No 33
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.49 E-value=3.1e-14 Score=118.18 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=81.9
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccc
Q psy9773 36 AYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKI 100 (252)
Q Consensus 36 ~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~ 100 (252)
.+...+.. ...++.+|||+|||+| .+ +..++..+..+++|+|+ .++.++++|+
T Consensus 31 ~~~~~l~~--~~~~~~~vLdiGcG~G--~~--------~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~ 98 (215)
T 2pxx_A 31 SFRALLEP--ELRPEDRILVLGCGNS--AL--------SYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV 98 (215)
T ss_dssp HHHHHHGG--GCCTTCCEEEETCTTC--SH--------HHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT
T ss_pred HHHHHHHH--hcCCCCeEEEECCCCc--HH--------HHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch
Confidence 35555543 3467889999999999 65 66677766558999999 3689999999
Q ss_pred cccCCC-CceeEEEecccccccC------------ChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 101 ENVELP-EKVDIIVSEWMGFYLL------------HESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 101 ~~~~~~-~~fDlIv~~~~~~~l~------------~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
..++++ ++||+|++..+++++. +..++..++..+.++|+|||++++..+.
T Consensus 99 ~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 99 RKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp TSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 998766 7899999977765553 2346789999999999999999998764
No 34
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.49 E-value=3e-13 Score=115.90 Aligned_cols=100 Identities=18% Similarity=0.168 Sum_probs=80.1
Q ss_pred HHHHHHHHHh-CCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEE
Q psy9773 34 NEAYRAAICD-NPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVI 96 (252)
Q Consensus 34 ~~~~~~~l~~-~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~ 96 (252)
...+...+.. .....++.+|||+|||+| .+ +..++..+ .+++|+|+ .++.++
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~vLDiG~G~G--~~--------~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~ 91 (263)
T 2yqz_A 23 AGQIATAMASAVHPKGEEPVFLELGVGTG--RI--------ALPLIARG-YRYIALDADAAMLEVFRQKIAGVDRKVQVV 91 (263)
T ss_dssp HHHHHHHHHHHCCCSSSCCEEEEETCTTS--TT--------HHHHHTTT-CEEEEEESCHHHHHHHHHHTTTSCTTEEEE
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCCcCC--HH--------HHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEE
Confidence 3344444432 345677899999999999 55 56666665 57999999 368999
Q ss_pred EccccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEee
Q psy9773 97 QNKIENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 97 ~~d~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~ 147 (252)
++|+..++++ ++||+|++..+++++ +++..++..+.++|+|||++++.
T Consensus 92 ~~d~~~~~~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 92 QADARAIPLPDESVHGVIVVHLWHLV---PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ESCTTSCCSCTTCEEEEEEESCGGGC---TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcccccCCCCCCCeeEEEECCchhhc---CCHHHHHHHHHHHCCCCcEEEEE
Confidence 9999988876 789999998887776 57789999999999999999987
No 35
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.48 E-value=2.1e-13 Score=116.61 Aligned_cols=94 Identities=18% Similarity=0.205 Sum_probs=76.3
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCCCce
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELPEKV 109 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~~~f 109 (252)
...++.+|||+|||+| .+ +..++..| .+++|+|+ .++.++++|+.+++.+++|
T Consensus 38 ~~~~~~~vLDlGcG~G--~~--------~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 106 (252)
T 1wzn_A 38 AKREVRRVLDLACGTG--IP--------TLELAERG-YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEF 106 (252)
T ss_dssp CSSCCCEEEEETCTTC--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCE
T ss_pred cccCCCEEEEeCCCCC--HH--------HHHHHHCC-CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCc
Confidence 3456789999999999 66 66677766 47999999 2589999999998877889
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+|++.....+..+..++..++..+.++|+|||++++..+.
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 99998544334445567899999999999999999987654
No 36
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.48 E-value=1.5e-13 Score=117.82 Aligned_cols=102 Identities=20% Similarity=0.174 Sum_probs=82.5
Q ss_pred HHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccccc
Q psy9773 38 RAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIEN 102 (252)
Q Consensus 38 ~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~ 102 (252)
...+.......++.+|||+|||+| .+ +..++.....+|+|+|+ .++.++++|+..
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G--~~--------~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~ 113 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLG--GG--------CMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILT 113 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTS--HH--------HHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT
T ss_pred HHHHHHhcCCCCCCEEEEECCCCC--HH--------HHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc
Confidence 344555556778899999999999 65 55666642357999999 378999999999
Q ss_pred cCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 103 VELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 103 ~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++++ ++||+|++..+++++. ..++..+|..+.++|+|||++++..+.
T Consensus 114 ~~~~~~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 114 KEFPENNFDLIYSRDAILALS-LENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp CCCCTTCEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCCCcEEEEeHHHHHHhcC-hHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 8876 8999999988766653 368899999999999999999998764
No 37
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.48 E-value=4e-13 Score=119.27 Aligned_cols=96 Identities=13% Similarity=0.086 Sum_probs=79.3
Q ss_pred HHHhCCC-CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC------------------CceEEEEcc
Q psy9773 40 AICDNPN-IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY------------------LILEVIQNK 99 (252)
Q Consensus 40 ~l~~~~~-~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~------------------~~i~~~~~d 99 (252)
.+..... ..++.+|||+|||+| .+ +..+++. + .+|+|+|+ .++.++++|
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G--~~--------~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 175 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRG--GS--------MVMAHRRFG-SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCN 175 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTS--HH--------HHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHhccCCCCCEEEEecCCCC--HH--------HHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 3444444 678899999999999 66 6666665 5 57999999 269999999
Q ss_pred ccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 100 IENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 100 ~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+.+++++ ++||+|++..+++++ ++..+|..+.++|+|||+|++....
T Consensus 176 ~~~~~~~~~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 176 MLDTPFDKGAVTASWNNESTMYV----DLHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp TTSCCCCTTCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhcCCCCCCCEeEEEECCchhhC----CHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 9998876 899999998887776 3889999999999999999988754
No 38
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.48 E-value=2.4e-13 Score=114.03 Aligned_cols=92 Identities=17% Similarity=0.120 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC------------C----------ceEEEEccccccC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY------------L----------ILEVIQNKIENVE 104 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~------------~----------~i~~~~~d~~~~~ 104 (252)
.++.+|||+|||+| .+ +..++..+. .+++|+|+ . ++.++++|+...+
T Consensus 28 ~~~~~vLDiGcG~G--~~--------~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 28 VNAKKVIDLGCGEG--NL--------LSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp TTCCEEEEETCTTC--HH--------HHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred cCCCEEEEecCCCC--HH--------HHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 56789999999999 66 666666544 68999999 1 7999999997776
Q ss_pred CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+ ++||+|++..+++++ ..+++..++..+.++|+|||+++.....
T Consensus 98 ~~~~~fD~V~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 98 KRFSGYDAATVIEVIEHL-DENRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp GGGTTCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred cccCCCCEEEEHHHHHhC-CHHHHHHHHHHHHHhhCCCEEEEEccch
Confidence 54 789999998888877 3335689999999999999977766543
No 39
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.47 E-value=1.6e-13 Score=119.78 Aligned_cols=94 Identities=17% Similarity=0.146 Sum_probs=77.7
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCC-C-
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVEL-P- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~-~- 106 (252)
..++.+|||+|||+| .+ +..++..+..+++|+|+ .++.++++|+...++ +
T Consensus 62 ~~~~~~vLDiGcG~G--~~--------~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 131 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKG--GD--------LLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLG 131 (298)
T ss_dssp CCTTCEEEEETCTTT--TT--------HHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCS
T ss_pred CCCCCeEEEECCCCC--HH--------HHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCC
Confidence 467899999999999 44 45566666568999999 258999999998876 3
Q ss_pred CceeEEEeccccccc-CChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 EKVDIIVSEWMGFYL-LHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l-~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|++..+++++ .+..++..+|..+.++|+|||+|++..+.
T Consensus 132 ~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 132 KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 789999998776653 56678999999999999999999988754
No 40
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.47 E-value=4.4e-13 Score=118.22 Aligned_cols=99 Identities=21% Similarity=0.108 Sum_probs=81.3
Q ss_pred HHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC------------------CceEEEEcc
Q psy9773 39 AAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY------------------LILEVIQNK 99 (252)
Q Consensus 39 ~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~------------------~~i~~~~~d 99 (252)
..+.......++.+|||||||+| .+ +..+++. | .+|+|+|+ .++.++.+|
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G--~~--------~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 130 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWG--ST--------MRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG 130 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTS--HH--------HHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC
T ss_pred HHHHHHcCCCCcCEEEEeeccCc--HH--------HHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 34444456788899999999999 66 6666665 6 67999999 269999999
Q ss_pred ccccCCCCceeEEEecccccccCCh------hhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 100 IENVELPEKVDIIVSEWMGFYLLHE------SMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 100 ~~~~~~~~~fDlIv~~~~~~~l~~~------~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+.++ +++||+|++..++++++.. ..+..++..+.++|+|||++++....
T Consensus 131 ~~~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 131 WEEF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp GGGC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred HHHc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9887 6889999998888887543 56789999999999999999997754
No 41
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.46 E-value=4.4e-13 Score=117.47 Aligned_cols=93 Identities=15% Similarity=0.134 Sum_probs=78.4
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC----------------CceEEEEccccccCCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY----------------LILEVIQNKIENVELP 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~----------------~~i~~~~~d~~~~~~~ 106 (252)
....++.+|||+|||+| .+ +..++.. + ..+|+|+|+ .++.++++|+.+++++
T Consensus 18 ~~~~~~~~vLDiGcG~G--~~--------~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 87 (284)
T 3gu3_A 18 WKITKPVHIVDYGCGYG--YL--------GLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN 87 (284)
T ss_dssp SCCCSCCEEEEETCTTT--HH--------HHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS
T ss_pred hccCCCCeEEEecCCCC--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC
Confidence 45678899999999999 66 6666664 2 258999999 2789999999998877
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|++..+++++ .++..++..+.++|+|||++++..+.
T Consensus 88 ~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 DKYDIAICHAFLLHM---TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SCEEEEEEESCGGGC---SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCeeEEEECChhhcC---CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 899999998887766 67789999999999999999988765
No 42
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.46 E-value=1e-13 Score=116.11 Aligned_cols=89 Identities=9% Similarity=-0.036 Sum_probs=72.1
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------C-----------------ceEEEE
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------L-----------------ILEVIQ 97 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~-----------------~i~~~~ 97 (252)
..++.+|||+|||+| .. +..+++.|. +|+|+|+ . ++++++
T Consensus 20 ~~~~~~vLD~GCG~G--~~--------~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 20 VVPGARVLVPLCGKS--QD--------MSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp CCTTCEEEETTTCCS--HH--------HHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE
T ss_pred cCCCCEEEEeCCCCc--Hh--------HHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEE
Confidence 467889999999999 65 667777774 7999998 1 478999
Q ss_pred ccccccCCC--CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEee
Q psy9773 98 NKIENVELP--EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 98 ~d~~~~~~~--~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~ 147 (252)
+|+.+++++ ++||+|++..++++++ ..+...++..++++|+|||++++.
T Consensus 89 ~d~~~l~~~~~~~fD~v~~~~~l~~l~-~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 89 GDFFALTARDIGHCAAFYDRAAMIALP-ADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp ECCSSSTHHHHHSEEEEEEESCGGGSC-HHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CccccCCcccCCCEEEEEECcchhhCC-HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 999998765 6899999977777663 446778999999999999984443
No 43
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.46 E-value=2.3e-13 Score=119.35 Aligned_cols=91 Identities=19% Similarity=0.094 Sum_probs=76.9
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC------------------CceEEEEccccccCCC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY------------------LILEVIQNKIENVELP 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~------------------~~i~~~~~d~~~~~~~ 106 (252)
...++.+|||+|||+| .+ +..+++. + .+++|+|+ .++.++++|+..++++
T Consensus 79 ~~~~~~~vLDiGcG~G--~~--------~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 147 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYG--GA--------ARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCE 147 (297)
T ss_dssp CCCTTCEEEEETCTTS--HH--------HHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSC
T ss_pred CCCCCCEEEEeCCCCC--HH--------HHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCC
Confidence 5678899999999999 55 5555554 5 47999999 3689999999999876
Q ss_pred -CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 -EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 -~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|++..+++++ +++..+|..+.++|+|||+|++..+.
T Consensus 148 ~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 148 DNSYDFIWSQDAFLHS---PDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp TTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCEeEEEecchhhhc---CCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 789999998887777 55789999999999999999998764
No 44
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.45 E-value=2.5e-13 Score=115.94 Aligned_cols=90 Identities=19% Similarity=0.247 Sum_probs=77.2
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC-C
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP-E 107 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~-~ 107 (252)
...++.+|||+|||+| .+ +..++..+ .+++|+|+ .++.++++|+..++++ +
T Consensus 18 ~~~~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 86 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAG--HT--------ALAFSPYV-QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDD 86 (239)
T ss_dssp TCCTTCEEEEESCTTS--HH--------HHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTT
T ss_pred CcCCCCEEEEEccCcC--HH--------HHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCC
Confidence 4678899999999999 66 66777766 47999999 3589999999998876 7
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+||+|++..+++++ .++..++..+.++|+|||++++...
T Consensus 87 ~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 87 SFDIITCRYAAHHF---SDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp CEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEEECCchhhc---cCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 89999998877776 5778999999999999999998754
No 45
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.45 E-value=2.6e-13 Score=113.80 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=80.7
Q ss_pred HHHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEE
Q psy9773 34 NEAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQ 97 (252)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~ 97 (252)
...+...+... ..++.+|||+|||+| .+ +..++..++ +++|+|+ .++.+++
T Consensus 25 ~~~~~~~l~~~--~~~~~~vLDlG~G~G--~~--------~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~ 91 (227)
T 1ve3_A 25 IETLEPLLMKY--MKKRGKVLDLACGVG--GF--------SFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIV 91 (227)
T ss_dssp HHHHHHHHHHS--CCSCCEEEEETCTTS--HH--------HHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHHh--cCCCCeEEEEeccCC--HH--------HHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEE
Confidence 34444555432 345889999999999 66 667777765 8999999 4689999
Q ss_pred ccccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 98 NKIENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 98 ~d~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+|+..++++ ++||+|++..+++ +.+..++..++..+.++|+|||++++..+.
T Consensus 92 ~d~~~~~~~~~~~D~v~~~~~~~-~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 92 GDARKLSFEDKTFDYVIFIDSIV-HFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCTTSCCSCTTCEEEEEEESCGG-GCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CchhcCCCCCCcEEEEEEcCchH-hCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 999998766 7899999977633 335567889999999999999999988654
No 46
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.45 E-value=4.3e-13 Score=113.35 Aligned_cols=91 Identities=22% Similarity=0.229 Sum_probs=76.7
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCCCCceeEEEec
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVELPEKVDIIVSE 115 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~~~~fDlIv~~ 115 (252)
.++.+|||+|||+| .+ +..++..+. +++|+|+ .++.++++|+..++.+++||+|+|.
T Consensus 39 ~~~~~vLdiG~G~G--~~--------~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTG--TH--------LEHFTKEFG-DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTS--HH--------HHHHHHHHS-EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEEC
T ss_pred CCCCeEEEecccCC--HH--------HHHHHHhCC-cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEc
Confidence 57789999999999 66 666666654 7999999 4689999999988777889999964
Q ss_pred c-cccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 116 W-MGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 116 ~-~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
. +++++.+..++..+|..+.++|+|||++++...
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 3 667776767889999999999999999999864
No 47
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.45 E-value=3.3e-13 Score=113.14 Aligned_cols=91 Identities=18% Similarity=0.065 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC------------C----------ceEEEEccccccC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY------------L----------ILEVIQNKIENVE 104 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~------------~----------~i~~~~~d~~~~~ 104 (252)
.++.+|||+|||+| .+ +..+++.+. .+++|+|+ . ++.++++|+...+
T Consensus 28 ~~~~~vLDiGcG~G--~~--------~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 28 SNARRVIDLGCGQG--NL--------LKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp TTCCEEEEETCTTC--HH--------HHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred cCCCEEEEeCCCCC--HH--------HHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 56789999999999 66 666666543 58999999 1 7999999997666
Q ss_pred CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+ ++||+|++..+++++ ..+++..++..+.++|+|||++++...
T Consensus 98 ~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 98 KRFHGYDAATVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp GGGCSCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ccCCCcCEEeeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 55 789999998888877 333668999999999999998877654
No 48
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.45 E-value=2.2e-13 Score=118.37 Aligned_cols=90 Identities=12% Similarity=-0.092 Sum_probs=73.7
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------C-----------------------c
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------L-----------------------I 92 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~-----------------------~ 92 (252)
..++.+|||+|||+| .. +..+++.|. +|+|+|+ . +
T Consensus 66 ~~~~~~vLD~GCG~G--~~--------~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKA--IE--------MKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp TCCSCEEEETTCTTC--TH--------HHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred CCCCCeEEEeCCCCc--HH--------HHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 357789999999999 55 667777775 7999998 2 3
Q ss_pred eEEEEccccccCCC--CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 93 LEVIQNKIENVELP--EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 93 i~~~~~d~~~~~~~--~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
++++++|+.+++++ ++||+|++..++++++ ..+...++..+.++|+|||+|++.+
T Consensus 135 i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~-~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 135 ISLYCCSIFDLPRANIGKFDRIWDRGALVAIN-PGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp EEEEESCTTTGGGGCCCCEEEEEESSSTTTSC-GGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eEEEECccccCCcccCCCEEEEEEhhhhhhCC-HHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 78999999999775 7999999977777764 4467889999999999999997543
No 49
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=4.8e-13 Score=114.55 Aligned_cols=97 Identities=11% Similarity=-0.028 Sum_probs=78.6
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC------------CceEEEEccccccCCCC
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY------------LILEVIQNKIENVELPE 107 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~------------~~i~~~~~d~~~~~~~~ 107 (252)
+.......++.+|||+|||+| .+ +..++.. +..+++|+|+ .++.++++|+..++.++
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G--~~--------~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~ 94 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPG--NS--------TELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQ 94 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTT--HH--------HHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSS
T ss_pred HHHhcCCCCCCEEEEecCcCC--HH--------HHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccC
Confidence 333345667889999999999 55 5565554 2357999999 47899999999988448
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+||+|++..+++++ .++..+|..+.++|+|||+|++..+.
T Consensus 95 ~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 95 KADLLYANAVFQWV---PDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp CEEEEEEESCGGGS---TTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred CcCEEEEeCchhhC---CCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 89999998887776 67889999999999999999998753
No 50
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.45 E-value=1.8e-13 Score=113.35 Aligned_cols=89 Identities=11% Similarity=0.071 Sum_probs=75.9
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCCC-CceeEEEecc
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVELP-EKVDIIVSEW 116 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~~-~~fDlIv~~~ 116 (252)
+.+|||+|||+| .+ +..++..+. +++|+|+ .++.++++|+.+++++ ++||+|++..
T Consensus 42 ~~~vLDiGcG~G--~~--------~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 110 (203)
T 3h2b_A 42 DGVILDVGSGTG--RW--------TGHLASLGH-QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWY 110 (203)
T ss_dssp CSCEEEETCTTC--HH--------HHHHHHTTC-CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEES
T ss_pred CCeEEEecCCCC--HH--------HHHHHhcCC-eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehh
Confidence 789999999999 66 667777664 7999999 5799999999998876 8999999988
Q ss_pred cccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 117 MGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 117 ~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+++++. ..++..+|..+.++|+|||++++....
T Consensus 111 ~l~~~~-~~~~~~~l~~~~~~L~pgG~l~i~~~~ 143 (203)
T 3h2b_A 111 SLIHMG-PGELPDALVALRMAVEDGGGLLMSFFS 143 (203)
T ss_dssp SSTTCC-TTTHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hHhcCC-HHHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 877763 237899999999999999999998753
No 51
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.44 E-value=2.7e-13 Score=112.95 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=72.3
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCCC-CceeEEEec
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVELP-EKVDIIVSE 115 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~~-~~fDlIv~~ 115 (252)
++.+|||+|||+| .+ +..+ +..+++|+|+ .++.++++|+..++++ ++||+|++.
T Consensus 36 ~~~~vLdiG~G~G--~~--------~~~l---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 102 (211)
T 2gs9_A 36 PGESLLEVGAGTG--YW--------LRRL---PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLF 102 (211)
T ss_dssp CCSEEEEETCTTC--HH--------HHHC---CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEE
T ss_pred CCCeEEEECCCCC--Hh--------HHhC---CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEc
Confidence 7889999999999 54 3333 4447999999 3789999999998876 789999998
Q ss_pred ccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 116 WMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 116 ~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+++++ .++..++..+.++|+|||++++..+.
T Consensus 103 ~~l~~~---~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 103 TTLEFV---EDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp SCTTTC---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred Chhhhc---CCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 776666 57889999999999999999998764
No 52
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=3.4e-13 Score=116.68 Aligned_cols=91 Identities=22% Similarity=0.263 Sum_probs=76.6
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEccccccCCC-CceeEE
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENVELP-EKVDII 112 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~~~~-~~fDlI 112 (252)
....++.+|||||||+| .+ +..++..+ .+|+|+|+ .++.++++|+.+++++ ++||+|
T Consensus 30 ~~~~~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 30 LNLPKGSVIADIGAGTG--GY--------SVALANQG-LFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp HCCCTTCEEEEETCTTS--HH--------HHHHHTTT-CEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEE
T ss_pred hCCCCCCEEEEEcCccc--HH--------HHHHHhCC-CEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEE
Confidence 34578899999999999 66 66777655 58999999 3789999999998876 899999
Q ss_pred EecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 113 VSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 113 v~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++..+++++ .++..++..+.++|+ ||++++....
T Consensus 99 ~~~~~l~~~---~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 99 ISILAIHHF---SHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp EEESCGGGC---SSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred EEcchHhhc---cCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 998887777 778899999999999 9977766543
No 53
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.44 E-value=2.7e-13 Score=112.49 Aligned_cols=93 Identities=22% Similarity=0.241 Sum_probs=75.0
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCC-Cce
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELP-EKV 109 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~-~~f 109 (252)
..++.+|||+|||+|...+ ..++..+ .+++|+|+ .++.++++|+..++++ ++|
T Consensus 21 ~~~~~~vLDiGcG~G~~~~---------~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~f 90 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPL---------SIFVEDG-YKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESM 90 (209)
T ss_dssp SSSCSEEEEESCCSSSCTH---------HHHHHTT-CEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCE
T ss_pred cCCCCEEEEECCCCCHHHH---------HHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCce
Confidence 4567899999999994322 2334444 47999999 3588999999998876 789
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+|++..+++++. ..++..++..+.++|+|||++++....
T Consensus 91 D~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 91 SFVYSYGTIFHMR-KNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp EEEEECSCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEEEcChHHhCC-HHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 9999987777663 467899999999999999999998765
No 54
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.43 E-value=6.9e-13 Score=108.83 Aligned_cols=90 Identities=20% Similarity=0.201 Sum_probs=75.0
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCCCce
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELPEKV 109 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~~~f 109 (252)
..++.+|||+|||+| .+ +..++..+ .+++|+|+ .++.++++|+..++++++|
T Consensus 30 ~~~~~~vLdiG~G~G--~~--------~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 98 (199)
T 2xvm_A 30 VVKPGKTLDLGCGNG--RN--------SLYLAANG-YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQY 98 (199)
T ss_dssp TSCSCEEEEETCTTS--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCE
T ss_pred ccCCCeEEEEcCCCC--HH--------HHHHHHCC-CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCc
Confidence 456789999999999 66 66666665 47999999 2789999999988777889
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
|+|++..+++++. ..++..++..+.++|+|||++++..
T Consensus 99 D~v~~~~~l~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 99 DFILSTVVLMFLE-AKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EEEEEESCGGGSC-GGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eEEEEcchhhhCC-HHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9999988877763 3478899999999999999987754
No 55
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.43 E-value=9.1e-13 Score=115.02 Aligned_cols=100 Identities=23% Similarity=0.152 Sum_probs=80.1
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHh-hcCCCcEEEeeC------------------CceEEEE
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCT-KVHPLDHYAPQY------------------LILEVIQ 97 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a-~~g~~~v~gvD~------------------~~i~~~~ 97 (252)
....+.......++.+|||||||+| .+ +..++ ..++ +|+|+|+ .++.++.
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G--~~--------~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~ 120 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWG--AT--------MMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL 120 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTS--HH--------HHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE
T ss_pred HHHHHHHHcCCCCcCEEEEECCccc--HH--------HHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 3444555556778899999999999 55 55555 4554 8999999 2789999
Q ss_pred ccccccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 98 NKIENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 98 ~d~~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+|+.+++ ++||+|++..+++++.. .++..+|..+.++|+|||++++....
T Consensus 121 ~d~~~~~--~~fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 121 AGWEQFD--EPVDRIVSIGAFEHFGH-ERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp SCGGGCC--CCCSEEEEESCGGGTCT-TTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CChhhCC--CCeeEEEEeCchhhcCh-HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 9998776 78999999888777643 46889999999999999999997754
No 56
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.43 E-value=1.9e-13 Score=117.32 Aligned_cols=94 Identities=14% Similarity=0.192 Sum_probs=75.2
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------------Cc-------------------
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------------LI------------------- 92 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------------~~------------------- 92 (252)
...++.+|||+|||+| .+ +..++..++.+|+|+|+ ..
T Consensus 53 ~~~~~~~vLDlGcG~G--~~--------~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (265)
T 2i62_A 53 GAVKGELLIDIGSGPT--IY--------QLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNR 122 (265)
T ss_dssp SSCCEEEEEEESCTTC--CG--------GGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTC
T ss_pred cccCCCEEEEECCCcc--HH--------HHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccc
Confidence 4567789999999999 55 56666666557999999 11
Q ss_pred -------------e-EEEEccccccCC--C---CceeEEEecccccccC-ChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 93 -------------L-EVIQNKIENVEL--P---EKVDIIVSEWMGFYLL-HESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 93 -------------i-~~~~~d~~~~~~--~---~~fDlIv~~~~~~~l~-~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+ .++++|+..... + ++||+|++..+++++. +..++..+|..+.++|+|||+|++...
T Consensus 123 ~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 123 MKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp SCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 7 899999988643 3 6899999988776443 446889999999999999999998763
No 57
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.43 E-value=2.6e-13 Score=113.54 Aligned_cols=92 Identities=26% Similarity=0.303 Sum_probs=76.4
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC--CCcEEEeeC-----------------CceEEEEccccccCCC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH--PLDHYAPQY-----------------LILEVIQNKIENVELP 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g--~~~v~gvD~-----------------~~i~~~~~d~~~~~~~ 106 (252)
...++.+|||+|||+| .+ +..++..+ ..+++|+|+ .++.++++|+..++++
T Consensus 34 ~~~~~~~vLDiG~G~G--~~--------~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAG--FY--------LPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLP 103 (219)
T ss_dssp TCCTTCEEEESSCTTC--TT--------HHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSC
T ss_pred CCCCCCEEEEEecCCC--HH--------HHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCC
Confidence 4577889999999999 55 55555543 358999999 3699999999998876
Q ss_pred -CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 -EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 -~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|++..+++++ .++..++..+.++|+|||++++....
T Consensus 104 ~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHEL---SEPLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp SSCEEEEEEESCGGGC---SSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEeehhhhhc---CCHHHHHHHHHHHhCCCeEEEEEEec
Confidence 789999998887776 57789999999999999999997643
No 58
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=99.43 E-value=7.1e-14 Score=136.00 Aligned_cols=139 Identities=20% Similarity=0.240 Sum_probs=110.7
Q ss_pred HHHHHHhccHHHHHHHHHHHHhCCCC-----CCCCEEEEEcCCcCchhhhhccCccchHHHhhc----C----------C
Q psy9773 22 EVHKLMLDDTVRNEAYRAAICDNPNI-----FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV----H----------P 82 (252)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~l~~~~~~-----~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~----g----------~ 82 (252)
..+..+.+|.+++..|.++|..+... ..+..|||||||+| .| +.++..+ + +
T Consensus 377 ~tYe~fekD~vRy~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtG--pL--------s~~al~A~~~a~~~~~~~~~~~~ 446 (745)
T 3ua3_A 377 GVYNTFEQDQIKYDVYGEAVVGALKDLGADGRKTVVIYLLGGGRG--PI--------GTKILKSEREYNNTFRQGQESLK 446 (745)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCTTC--HH--------HHHHHHHHHHHHHHHSTTSCCCE
T ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHhhcccCCCcEEEEECCCCC--HH--------HHHHHHHHHHhCccccccccccc
Confidence 45566889999999999999875221 12468999999999 77 5432221 1 2
Q ss_pred CcEEEeeC-----------------CceEEEEccccccCC------CCceeEEEecccccccCChhhHHHHHHHHhcccc
Q psy9773 83 LDHYAPQY-----------------LILEVIQNKIENVEL------PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLK 139 (252)
Q Consensus 83 ~~v~gvD~-----------------~~i~~~~~d~~~~~~------~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~Lk 139 (252)
.+|+|||. .+|+++++|++++.. ++++|+||+.++++++.++. ...+|..+.++|+
T Consensus 447 ~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL-~pe~Ld~v~r~Lk 525 (745)
T 3ua3_A 447 VKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNEL-SPECLDGVTGFLK 525 (745)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGS-HHHHHHTTGGGSC
T ss_pred cEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhc-cHHHHHHHHHhCC
Confidence 38999999 579999999999987 68999999999988876664 4557788889999
Q ss_pred CCeEEEeeccccccCCCCChhHHHHhhhhhCCccc
Q psy9773 140 PEGVMYPYKCILHSAPSYSPEIFKFWENIAGEEEK 174 (252)
Q Consensus 140 pgG~lv~~~~~~~~~~~~~~~~~~~w~~~~g~~~~ 174 (252)
|||+++++..+.|.+++.... +|..+++++++
T Consensus 526 p~Gi~iP~~~t~ylaPi~~~~---l~~~v~~~~~~ 557 (745)
T 3ua3_A 526 PTTISIPQKYTSYVKPIMSTH---IHQTIKAQSIP 557 (745)
T ss_dssp TTCEEESCEEEEEEEEEECHH---HHHHHHTCCCC
T ss_pred CCcEEECCccEEEEEEecCHH---HHHHHHhhccc
Confidence 999999999999999998876 57777777654
No 59
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.43 E-value=4e-13 Score=112.46 Aligned_cols=91 Identities=21% Similarity=0.215 Sum_probs=74.9
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------C-ceEEEEccccccCCCCceeEEEe
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------L-ILEVIQNKIENVELPEKVDIIVS 114 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~-~i~~~~~d~~~~~~~~~fDlIv~ 114 (252)
.++.+|||+|||+| .+ +..++..+ .+++|+|+ . ++.++++|+..++.+++||+|++
T Consensus 44 ~~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 112 (220)
T 3hnr_A 44 KSFGNVLEFGVGTG--NL--------TNKLLLAG-RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVS 112 (220)
T ss_dssp TCCSEEEEECCTTS--HH--------HHHHHHTT-CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEE
T ss_pred cCCCeEEEeCCCCC--HH--------HHHHHhCC-CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEE
Confidence 47889999999999 66 66666665 57999999 2 79999999999877789999999
Q ss_pred cccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 115 EWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 115 ~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
..+++++... ....+|..+.++|+|||++++..+.
T Consensus 113 ~~~l~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 113 TYAFHHLTDD-EKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp ESCGGGSCHH-HHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred CcchhcCChH-HHHHHHHHHHHhcCCCCEEEEEecc
Confidence 8887777222 2344999999999999999998654
No 60
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.43 E-value=6e-13 Score=111.83 Aligned_cols=93 Identities=14% Similarity=0.108 Sum_probs=78.3
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------------CceEEEEccccccC
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------------LILEVIQNKIENVE 104 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------------~~i~~~~~d~~~~~ 104 (252)
..++.+|||+|||+| .+ +..++..+ .+++|+|+ .++.++++|+..++
T Consensus 28 ~~~~~~vLdiG~G~G--~~--------~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 96 (235)
T 3sm3_A 28 LQEDDEILDIGCGSG--KI--------SLELASKG-YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS 96 (235)
T ss_dssp CCTTCEEEEETCTTS--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC
T ss_pred CCCCCeEEEECCCCC--HH--------HHHHHhCC-CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC
Confidence 457889999999999 66 66677666 47999999 15799999999988
Q ss_pred CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++ ++||+|++..+++++.+......++..+.++|+|||++++....
T Consensus 97 ~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 97 FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECC
Confidence 76 88999999888888866666669999999999999999998754
No 61
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=3.1e-13 Score=117.82 Aligned_cols=91 Identities=20% Similarity=0.187 Sum_probs=76.9
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCCCCceeEEE
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVELPEKVDIIV 113 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~~~~fDlIv 113 (252)
...++.+|||||||+| .+ +..++..+ .+|+|+|+ .++.++++|+..++++++||+|+
T Consensus 54 ~~~~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 122 (279)
T 3ccf_A 54 NPQPGEFILDLGCGTG--QL--------TEKIAQSG-AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVF 122 (279)
T ss_dssp CCCTTCEEEEETCTTS--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEE
T ss_pred CCCCCCEEEEecCCCC--HH--------HHHHHhCC-CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEE
Confidence 3567889999999999 66 56666654 58999999 47899999999988778999999
Q ss_pred ecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 114 SEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 114 ~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+..+++++ .++..+|..+.++|+|||+|++..+.
T Consensus 123 ~~~~l~~~---~d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 123 SNAMLHWV---KEPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp EESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EcchhhhC---cCHHHHHHHHHHhcCCCcEEEEEecC
Confidence 98887776 57889999999999999999987653
No 62
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.43 E-value=4e-13 Score=114.56 Aligned_cols=92 Identities=13% Similarity=0.137 Sum_probs=75.1
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC-Cce
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP-EKV 109 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~-~~f 109 (252)
.++.+|||||||+| .+ +..++..+..+++|+|+ .++.++++|+..++++ ++|
T Consensus 78 ~~~~~vLDiGcG~G--~~--------~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 147 (241)
T 2ex4_A 78 TGTSCALDCGAGIG--RI--------TKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSY 147 (241)
T ss_dssp CCCSEEEEETCTTT--HH--------HHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCE
T ss_pred CCCCEEEEECCCCC--HH--------HHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCE
Confidence 36889999999999 66 66666665568999999 1488999999988776 689
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+|++..+++++.. +.+..+|..+.++|+|||+|++..+.
T Consensus 148 D~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 148 DVIWIQWVIGHLTD-QHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp EEEEEESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEEEcchhhhCCH-HHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 99999888777632 24668999999999999999997653
No 63
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.42 E-value=4.4e-13 Score=118.61 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=80.6
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHH--hhcCCCcEEEeeC------------------CceEEE
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFC--TKVHPLDHYAPQY------------------LILEVI 96 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~--a~~g~~~v~gvD~------------------~~i~~~ 96 (252)
+...+. ....++.+|||||||+| .+ +..+ +..+..+|+|+|+ .+++++
T Consensus 108 ~~~~l~--~~l~~~~~vLDiGcG~G--~~--------~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~ 175 (305)
T 3ocj_A 108 FRRALQ--RHLRPGCVVASVPCGWM--SE--------LLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLH 175 (305)
T ss_dssp HHHHHH--HHCCTTCEEEETTCTTC--HH--------HHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEE
T ss_pred HHHHHH--hhCCCCCEEEEecCCCC--HH--------HHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEE
Confidence 444442 34577899999999999 54 4444 2333458999999 249999
Q ss_pred EccccccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 97 QNKIENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 97 ~~d~~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++|+.+++++++||+|++..+.++++.......++..+.++|+|||+|++....
T Consensus 176 ~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 176 RQDAWKLDTREGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp ECCGGGCCCCSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECchhcCCccCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 999999987789999999888888866666667999999999999999997743
No 64
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.42 E-value=1.2e-12 Score=114.33 Aligned_cols=88 Identities=19% Similarity=0.114 Sum_probs=74.4
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccC-CC-C
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVE-LP-E 107 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~-~~-~ 107 (252)
..+.+|||||||+| .+ +..++..+ .+|+|+|+ .++.++++|+.+++ ++ +
T Consensus 67 ~~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 135 (285)
T 4htf_A 67 PQKLRVLDAGGGEG--QT--------AIKMAERG-HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLET 135 (285)
T ss_dssp SSCCEEEEETCTTC--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSS
T ss_pred CCCCEEEEeCCcch--HH--------HHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCC
Confidence 34689999999999 66 66677665 47999999 36889999999987 33 8
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+||+|++..+++++ +++..+|..+.++|+|||++++...
T Consensus 136 ~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 136 PVDLILFHAVLEWV---ADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp CEEEEEEESCGGGC---SCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceEEEECchhhcc---cCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 99999998887777 6678999999999999999998765
No 65
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.42 E-value=6.8e-13 Score=116.84 Aligned_cols=91 Identities=15% Similarity=0.153 Sum_probs=73.3
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------------------CceEEEEccccccCCCCc
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------------------LILEVIQNKIENVELPEK 108 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------------------~~i~~~~~d~~~~~~~~~ 108 (252)
.+.+|||||||+| .+ +..++..+ .+|+|+|+ .++.++++|+.+++++++
T Consensus 82 ~~~~vLDlGcG~G--~~--------~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 150 (299)
T 3g2m_A 82 VSGPVLELAAGMG--RL--------TFPFLDLG-WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKR 150 (299)
T ss_dssp CCSCEEEETCTTT--TT--------HHHHHTTT-CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCC
T ss_pred CCCcEEEEeccCC--HH--------HHHHHHcC-CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCC
Confidence 3459999999999 55 66677766 57999999 148999999999988889
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
||+|++.....+.....+...+|..+.++|+|||+|++....
T Consensus 151 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 151 FGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp EEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 999997543333334456899999999999999999998765
No 66
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.40 E-value=5.8e-13 Score=114.14 Aligned_cols=92 Identities=23% Similarity=0.224 Sum_probs=73.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccC--CC-C
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVE--LP-E 107 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~--~~-~ 107 (252)
..+|.+|||||||+| .. +..+++.++.++++||+ .++.++.+|+..+. ++ +
T Consensus 58 ~~~G~rVLdiG~G~G--~~--------~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 127 (236)
T 3orh_A 58 SSKGGRVLEVGFGMA--IA--------ASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDG 127 (236)
T ss_dssp TTTCEEEEEECCTTS--HH--------HHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTT
T ss_pred ccCCCeEEEECCCcc--HH--------HHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhccccccc
Confidence 367899999999999 66 66777765568999999 56788899887663 33 7
Q ss_pred ceeEEEecccc--cccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 108 KVDIIVSEWMG--FYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 108 ~fDlIv~~~~~--~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+||.|+...+. ..+.+..++..++..+.|+|||||+|++..
T Consensus 128 ~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 128 HFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 89999875432 344566789999999999999999998764
No 67
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.40 E-value=1.1e-12 Score=116.47 Aligned_cols=93 Identities=18% Similarity=0.079 Sum_probs=75.0
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------------C----------ceEEEEcccccc
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------------L----------ILEVIQNKIENV 103 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------------~----------~i~~~~~d~~~~ 103 (252)
.++.+|||+|||+| .+ +..++..+..+++|+|+ . ++.++++|+..+
T Consensus 33 ~~~~~VLDlGcG~G--~~--------~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 102 (313)
T 3bgv_A 33 KRDITVLDLGCGKG--GD--------LLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKE 102 (313)
T ss_dssp --CCEEEEETCTTT--TT--------HHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTS
T ss_pred CCCCEEEEECCCCc--HH--------HHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEeccccc
Confidence 46789999999999 44 45555544568999999 0 688999999987
Q ss_pred C----CC---CceeEEEeccccccc-CChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 104 E----LP---EKVDIIVSEWMGFYL-LHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 104 ~----~~---~~fDlIv~~~~~~~l-~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+ ++ ++||+|+|..+++++ .+..++..+|..+.++|+|||+|++..+.
T Consensus 103 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 103 LLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred chhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 6 32 589999998888777 56678889999999999999999998764
No 68
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.39 E-value=9.8e-13 Score=111.56 Aligned_cols=90 Identities=13% Similarity=0.019 Sum_probs=74.1
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCCCCcee
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVELPEKVD 110 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~~~~fD 110 (252)
++.+|||+|||+| .+ +..++..+ .+|+|+|+ .++.++++|+.+++..++||
T Consensus 66 ~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 134 (235)
T 3lcc_A 66 PLGRALVPGCGGG--HD--------VVAMASPE-RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFD 134 (235)
T ss_dssp CCEEEEEETCTTC--HH--------HHHHCBTT-EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEE
T ss_pred CCCCEEEeCCCCC--HH--------HHHHHhCC-CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCee
Confidence 4469999999999 65 56666655 47999999 24899999999987668999
Q ss_pred EEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 111 IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 111 lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+|++..+++++. ..+...++..+.++|+|||+|++....
T Consensus 135 ~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 135 LIFDYVFFCAIE-PEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp EEEEESSTTTSC-GGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEEChhhhcCC-HHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 999988877763 337889999999999999999986653
No 69
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.39 E-value=5.2e-13 Score=109.86 Aligned_cols=93 Identities=14% Similarity=0.095 Sum_probs=74.4
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccC--C-CC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVE--L-PE 107 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~--~-~~ 107 (252)
.++.+|||+|||+| .+ +..++..++.+|+|+|+ .+++++++|+.++. . .+
T Consensus 43 ~~~~~vLDlgcG~G--~~--------~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 112 (189)
T 3p9n_A 43 LTGLAVLDLYAGSG--AL--------GLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTS 112 (189)
T ss_dssp CTTCEEEEETCTTC--HH--------HHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSS
T ss_pred CCCCEEEEeCCCcC--HH--------HHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCC
Confidence 57889999999999 66 66666677678999999 37899999998874 2 37
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhc--cccCCeEEEeeccccc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDK--FLKPEGVMYPYKCILH 152 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~--~LkpgG~lv~~~~~~~ 152 (252)
+||+|+++...++ ...++..++..+.+ +|+|||++++......
T Consensus 113 ~fD~i~~~~p~~~--~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 113 PVDLVLADPPYNV--DSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp CCSEEEECCCTTS--CHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred CccEEEECCCCCc--chhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 8999999765222 12578889999988 9999999999876543
No 70
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.39 E-value=1.3e-12 Score=114.16 Aligned_cols=90 Identities=20% Similarity=0.209 Sum_probs=76.2
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCCCceeE
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELPEKVDI 111 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~~~fDl 111 (252)
.++.+|||+|||+| .+ +..++..|. +|+|+|+ .++.++++|+..++.+++||+
T Consensus 119 ~~~~~vLD~GcG~G--~~--------~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~ 187 (286)
T 3m70_A 119 ISPCKVLDLGCGQG--RN--------SLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDF 187 (286)
T ss_dssp SCSCEEEEESCTTC--HH--------HHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEE
T ss_pred cCCCcEEEECCCCC--HH--------HHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccE
Confidence 37889999999999 66 667777764 7999999 278999999999877789999
Q ss_pred EEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 112 IVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 112 Iv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
|++..+++++ ..+....++..+.++|+|||++++...
T Consensus 188 i~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 188 IVSTVVFMFL-NRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp EEECSSGGGS-CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEccchhhC-CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9998887776 445688999999999999999877543
No 71
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.39 E-value=3.1e-12 Score=113.43 Aligned_cols=100 Identities=20% Similarity=0.120 Sum_probs=80.0
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC------------------CceEEEE
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY------------------LILEVIQ 97 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~------------------~~i~~~~ 97 (252)
....+.......++.+|||+|||+| .+ +..+++. ++ +|+|+|+ .++.++.
T Consensus 78 ~~~~~~~~~~~~~~~~vLDiGcG~G--~~--------~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 146 (318)
T 2fk8_A 78 KVDLNLDKLDLKPGMTLLDIGCGWG--TT--------MRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL 146 (318)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCTTS--HH--------HHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE
T ss_pred HHHHHHHhcCCCCcCEEEEEcccch--HH--------HHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 3344555556778899999999999 55 5566654 64 7999999 2489999
Q ss_pred ccccccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 98 NKIENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 98 ~d~~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+|+.+++ ++||+|++..+++++.. .++..++..+.++|+|||++++..+.
T Consensus 147 ~d~~~~~--~~fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 147 QGWEDFA--EPVDRIVSIEAFEHFGH-ENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp SCGGGCC--CCCSEEEEESCGGGTCG-GGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CChHHCC--CCcCEEEEeChHHhcCH-HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 9998875 78999999888776633 47889999999999999999997764
No 72
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.39 E-value=3.9e-13 Score=118.28 Aligned_cols=137 Identities=14% Similarity=0.106 Sum_probs=79.1
Q ss_pred CccccCC-CChhhHhhhhccHHHHHHHhccHHHHHHHHHHH---HhCCC-CCCCCEEEEEcCCcCchhhhhccCccc-hH
Q psy9773 2 DMEVVKD-HDEEEYFESYTDLEVHKLMLDDTVRNEAYRAAI---CDNPN-IFAGKTVLDVGTGTGKSILLQGHGVDH-HS 75 (252)
Q Consensus 2 ~m~~~~~-~~~~~yf~~y~~~~~~~~~l~~~~~~~~~~~~l---~~~~~-~~~~~~VLDlGcGtG~~~ll~~~~v~~-s~ 75 (252)
.+.+... ++.+.|...|..+..... ........+.+.+ ..... ..++.+|||||||+|.... .+ ..
T Consensus 2 ~~~~~~~~~d~~~y~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~------~~l~~ 73 (292)
T 2aot_A 2 ASSMRSLFSDHGKYVESFRRFLNHST--EHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDL------QILSK 73 (292)
T ss_dssp ---CCBGGGCHHHHHHHHHHHHTTBS--HHHHHHHHHHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHH------HHHHH
T ss_pred CcccccccccHHHHHHHHHHHHHhcc--HHHHHHHHHHHhchhHHhhccCCCCCCeEEEEcCCCCHHHH------HHHHH
Confidence 3333333 566677777776543211 0111112222222 11112 3567899999999993321 00 11
Q ss_pred HHhhcCCCc--EEEeeC------------------CceE--EEEccccccC------C-CCceeEEEecccccccCChhh
Q psy9773 76 FCTKVHPLD--HYAPQY------------------LILE--VIQNKIENVE------L-PEKVDIIVSEWMGFYLLHESM 126 (252)
Q Consensus 76 ~~a~~g~~~--v~gvD~------------------~~i~--~~~~d~~~~~------~-~~~fDlIv~~~~~~~l~~~~~ 126 (252)
++...+... ++|+|+ .++. +..+++.+++ + +++||+|++..+++++ ++
T Consensus 74 l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~---~d 150 (292)
T 2aot_A 74 VQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYV---KD 150 (292)
T ss_dssp HHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGC---SC
T ss_pred HHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeec---CC
Confidence 122222233 399998 1333 3455555443 2 3789999998887777 77
Q ss_pred HHHHHHHHhccccCCeEEEeecc
Q psy9773 127 IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 127 ~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+..+|.+++++|||||+|++...
T Consensus 151 ~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 151 IPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEe
Confidence 88999999999999999998753
No 73
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.38 E-value=6.3e-13 Score=118.39 Aligned_cols=93 Identities=17% Similarity=0.113 Sum_probs=69.7
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------C--------ceEEEEccc----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------L--------ILEVIQNKI---- 100 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~--------~i~~~~~d~---- 100 (252)
.++.+|||||||+|..+. .++..+..+|+|+|+ . ++.+.+.|+
T Consensus 47 ~~~~~VLDlGCG~G~~l~----------~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~ 116 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLE----------KYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDT 116 (302)
T ss_dssp CSCCEEEETTCTTTTTHH----------HHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSS
T ss_pred CCCCeEEEEecCCcHhHH----------HHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccch
Confidence 357899999999994332 333344468999999 1 256778888
Q ss_pred --cccC--CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 101 --ENVE--LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 101 --~~~~--~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+++ ++ ++||+|+|..++|++.+..+...+|.+++++|+|||+|++..+.
T Consensus 117 ~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 117 FVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp HHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 3221 23 78999999888777655456789999999999999999998764
No 74
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.38 E-value=6.7e-13 Score=117.13 Aligned_cols=58 Identities=7% Similarity=0.087 Sum_probs=47.5
Q ss_pred ceEEEEccccccC------CCCceeEEEecccccccC---ChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 92 ILEVIQNKIENVE------LPEKVDIIVSEWMGFYLL---HESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 92 ~i~~~~~d~~~~~------~~~~fDlIv~~~~~~~l~---~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++.|+++|+.... ..++||+|+|..++.+++ +...+..+|..+.++|+|||+|++...
T Consensus 155 ~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 155 NVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp TEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred cceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 5889999998654 237899999988876653 445788999999999999999999754
No 75
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.37 E-value=6.8e-13 Score=112.99 Aligned_cols=94 Identities=22% Similarity=0.211 Sum_probs=72.8
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEcccccc--CCC-C
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENV--ELP-E 107 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~--~~~-~ 107 (252)
..++.+|||||||+| .+ +..++..+..+|+|+|+ .++.++++|+.++ +++ +
T Consensus 58 ~~~~~~vLDiGcGtG--~~--------~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 127 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMA--IA--------ASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDG 127 (236)
T ss_dssp TTTCEEEEEECCTTS--HH--------HHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTT
T ss_pred CCCCCeEEEEeccCC--HH--------HHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCC
Confidence 357789999999999 65 56666655558999999 4688999999988 666 7
Q ss_pred ceeEEEe-cccc-cccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 108 KVDIIVS-EWMG-FYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 108 ~fDlIv~-~~~~-~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+||+|++ .+.. ....+...+..++..+.++|||||+|++....
T Consensus 128 ~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 128 HFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 8999999 4432 12223445678899999999999999987643
No 76
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.37 E-value=2e-12 Score=113.88 Aligned_cols=87 Identities=13% Similarity=0.139 Sum_probs=72.1
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhh--cCCCcEEEeeC-------------------CceEEEEccccccCCC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK--VHPLDHYAPQY-------------------LILEVIQNKIENVELP 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~--~g~~~v~gvD~-------------------~~i~~~~~d~~~~~~~ 106 (252)
.++.+|||||||+| .+ +..++. .+..+|+|+|+ .++.++++|+.+++++
T Consensus 35 ~~~~~vLDiGcG~G--~~--------~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~ 104 (299)
T 3g5t_A 35 GERKLLVDVGCGPG--TA--------TLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFL 104 (299)
T ss_dssp SCCSEEEEETCTTT--HH--------HHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGG
T ss_pred CCCCEEEEECCCCC--HH--------HHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcc
Confidence 57899999999999 55 556664 24578999999 2789999999987654
Q ss_pred -------CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 107 -------EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 107 -------~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
++||+|++..+++++ ++..++..+.++|+|||+|++..
T Consensus 105 ~~~~~~~~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 105 GADSVDKQKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp CTTTTTSSCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccccCCCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEEEe
Confidence 589999998887776 68899999999999999998843
No 77
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.37 E-value=5.2e-13 Score=111.49 Aligned_cols=90 Identities=19% Similarity=0.179 Sum_probs=72.7
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEcccccc---CCC--Ccee
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENV---ELP--EKVD 110 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~---~~~--~~fD 110 (252)
..++.+|||+|||+| .+ +..++..+ .+++|+|+ .++.+..+|+.++ +.. .+||
T Consensus 50 ~~~~~~vLdiG~G~G--~~--------~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 50 GRQPERVLDLGCGEG--WL--------LRALADRG-IEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp HTCCSEEEEETCTTC--HH--------HHHHHTTT-CEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred cCCCCEEEEeCCCCC--HH--------HHHHHHCC-CEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCcc
Confidence 345689999999999 66 66777666 47999999 5678899998877 333 5699
Q ss_pred EEEecccccccCChhhHHHHHHHHhccccCCeEEEeecccc
Q psy9773 111 IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCIL 151 (252)
Q Consensus 111 lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~~ 151 (252)
+|++..+++ ..++..++..+.++|+|||+|++..+..
T Consensus 119 ~v~~~~~l~----~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 119 LICANFALL----HQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp EEEEESCCC----SSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEEECchhh----hhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 999977655 3577899999999999999999987643
No 78
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.36 E-value=9.8e-13 Score=105.87 Aligned_cols=87 Identities=17% Similarity=0.191 Sum_probs=72.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCCC-CceeEEE
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVELP-EKVDIIV 113 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~~-~~fDlIv 113 (252)
..++.+|||+|||+| .+ +..++..+. +++|+|+ .++.++.+| .+++ ++||+|+
T Consensus 15 ~~~~~~vLDiG~G~G--~~--------~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~ 80 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNG--FY--------CKYLLEFAT-KLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFIL 80 (170)
T ss_dssp SSCCEEEEEETCTTC--TT--------HHHHHTTEE-EEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEE
T ss_pred cCCCCeEEEECCCCC--HH--------HHHHHhhcC-eEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEE
Confidence 467789999999999 66 667776654 8999999 578999998 4444 7899999
Q ss_pred ecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 114 SEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 114 ~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+..+++++ .++..++..+.++|+|||++++....
T Consensus 81 ~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 81 FANSFHDM---DDKQHVISEVKRILKDDGRVIIIDWR 114 (170)
T ss_dssp EESCSTTC---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred Eccchhcc---cCHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 98876666 57889999999999999999998654
No 79
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.35 E-value=1.6e-12 Score=113.86 Aligned_cols=91 Identities=18% Similarity=0.227 Sum_probs=68.5
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC--------c---------------------------
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL--------I--------------------------- 92 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~--------~--------------------------- 92 (252)
.++.+|||||||+|. + +.+++..+..+|+|+|+. .
T Consensus 70 ~~~~~vLDiGcG~G~--~--------~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 139 (289)
T 2g72_A 70 VSGRTLIDIGSGPTV--Y--------QLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGEC 139 (289)
T ss_dssp SCCSEEEEETCTTCC--G--------GGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCC
T ss_pred CCCCeEEEECCCcCh--H--------HHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccc
Confidence 477899999999994 4 444444334589999991 0
Q ss_pred ------------eEEEEccccc-cCCC------CceeEEEecccccccCC-hhhHHHHHHHHhccccCCeEEEeec
Q psy9773 93 ------------LEVIQNKIEN-VELP------EKVDIIVSEWMGFYLLH-ESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 93 ------------i~~~~~d~~~-~~~~------~~fDlIv~~~~~~~l~~-~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+.++++|+.. ++++ ++||+|++..+++++.. ..++..+|.++.++|||||+|++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 140 WQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3456668877 4432 56999999888777433 3688999999999999999999864
No 80
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.35 E-value=4.8e-12 Score=103.27 Aligned_cols=93 Identities=18% Similarity=0.105 Sum_probs=70.6
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccC--C
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVE--L 105 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~--~ 105 (252)
....++.+|||+|||+| .+ +..+++. ..+|+|+|+ .++.+++.++..+. .
T Consensus 18 ~~~~~~~~vLDiGcG~G--~~--------~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~ 86 (185)
T 3mti_A 18 EVLDDESIVVDATMGNG--ND--------TAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYV 86 (185)
T ss_dssp TTCCTTCEEEESCCTTS--HH--------HHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTC
T ss_pred HhCCCCCEEEEEcCCCC--HH--------HHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhc
Confidence 34678899999999999 66 6677776 468999999 46899998887753 2
Q ss_pred CCceeEEEecccccccC--------ChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 PEKVDIIVSEWMGFYLL--------HESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 ~~~fDlIv~~~~~~~l~--------~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+++||+|+++. .+++ .......++..+.++|+|||+|++....
T Consensus 87 ~~~fD~v~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 87 REPIRAAIFNL--GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp CSCEEEEEEEE--C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred cCCcCEEEEeC--CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 47899998853 2222 2345678899999999999999987654
No 81
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.35 E-value=9.4e-12 Score=101.21 Aligned_cols=92 Identities=17% Similarity=0.174 Sum_probs=75.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCCC-CceeEEE
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVELP-EKVDIIV 113 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~~-~~fDlIv 113 (252)
..++.+|||+|||+| .+ +..++..+ .+++++|+ .++.++++|+..++++ ++||+|+
T Consensus 44 ~~~~~~vLdiG~G~G--~~--------~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 112 (195)
T 3cgg_A 44 APRGAKILDAGCGQG--RI--------GGYLSKQG-HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIV 112 (195)
T ss_dssp SCTTCEEEEETCTTT--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEE
T ss_pred ccCCCeEEEECCCCC--HH--------HHHHHHCC-CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEE
Confidence 357889999999999 66 56666665 57999999 4689999999988766 7899999
Q ss_pred ec-ccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 114 SE-WMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 114 ~~-~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+. .+.+++ ...+...++..+.++|+|||++++..+.
T Consensus 113 ~~~~~~~~~-~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 113 SAGNVMGFL-AEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp ECCCCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred ECCcHHhhc-ChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 97 455544 4456789999999999999999997654
No 82
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.34 E-value=5.9e-12 Score=102.34 Aligned_cols=93 Identities=13% Similarity=0.123 Sum_probs=74.0
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------Cc--eEEEEccccccCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LI--LEVIQNKIENVEL 105 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~--i~~~~~d~~~~~~ 105 (252)
....++.+|||+|||+| .+ +..++.. ..+++|+|+ .+ +.++++|+.....
T Consensus 48 ~~~~~~~~vLdiG~G~G--~~--------~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (194)
T 1dus_A 48 VVVDKDDDILDLGCGYG--VI--------GIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK 116 (194)
T ss_dssp CCCCTTCEEEEETCTTS--HH--------HHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT
T ss_pred cccCCCCeEEEeCCCCC--HH--------HHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc
Confidence 34558889999999999 66 6666666 468999999 22 9999999988654
Q ss_pred CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 ~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+++||+|+++...++ ....+..++..+.++|+|||++++..+.
T Consensus 117 ~~~~D~v~~~~~~~~--~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 117 DRKYNKIITNPPIRA--GKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp TSCEEEEEECCCSTT--CHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred cCCceEEEECCCccc--chhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 578999999765332 1356789999999999999999998765
No 83
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.34 E-value=7.5e-12 Score=103.94 Aligned_cols=90 Identities=17% Similarity=0.135 Sum_probs=72.8
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC-----------------CceEEEEccccccCCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY-----------------LILEVIQNKIENVELP 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~-----------------~~i~~~~~d~~~~~~~ 106 (252)
....++.+|||+|||+| .+ +..+++.+ ..+++|+|+ .++.++++|+......
T Consensus 36 l~~~~~~~vLDiG~G~G--~~--------~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 105 (204)
T 3e05_A 36 LRLQDDLVMWDIGAGSA--SV--------SIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDD 105 (204)
T ss_dssp TTCCTTCEEEEETCTTC--HH--------HHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTT
T ss_pred cCCCCCCEEEEECCCCC--HH--------HHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhc
Confidence 45678899999999999 66 66766664 368999999 4689999999766444
Q ss_pred -CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 -EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 -~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|++..... ++..++..+.++|+|||++++....
T Consensus 106 ~~~~D~i~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 106 LPDPDRVFIGGSGG------MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp SCCCSEEEESCCTT------CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred CCCCCEEEECCCCc------CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 7899999865422 6778999999999999999998654
No 84
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.34 E-value=5.9e-12 Score=105.20 Aligned_cols=89 Identities=20% Similarity=0.117 Sum_probs=72.8
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEcccccc--CCC-CceeEEEe
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENV--ELP-EKVDIIVS 114 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~--~~~-~~fDlIv~ 114 (252)
.++.+|||+|||+| .+ +..++..+ .+++|+|+ ....++.+|+... +++ ++||+|++
T Consensus 31 ~~~~~vLdiG~G~G--~~--------~~~l~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~ 99 (230)
T 3cc8_A 31 KEWKEVLDIGCSSG--AL--------GAAIKENG-TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIF 99 (230)
T ss_dssp TTCSEEEEETCTTS--HH--------HHHHHTTT-CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEE
T ss_pred cCCCcEEEeCCCCC--HH--------HHHHHhcC-CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEE
Confidence 67889999999999 65 56666665 68999999 3357899999874 444 78999999
Q ss_pred cccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 115 EWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 115 ~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
..+++++ .++..++..+.++|+|||++++..+.
T Consensus 100 ~~~l~~~---~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 100 GDVLEHL---FDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp ESCGGGS---SCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred CChhhhc---CCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 8877766 56679999999999999999998654
No 85
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=2.5e-12 Score=109.55 Aligned_cols=94 Identities=12% Similarity=-0.044 Sum_probs=76.2
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------------CceEEEEccccccCCC----
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------------LILEVIQNKIENVELP---- 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------------~~i~~~~~d~~~~~~~---- 106 (252)
....++.+|||+|||+| .+ +..++..+. +|+|+|+ .++.++++|+.+++..
T Consensus 52 ~~~~~~~~vLD~GcG~G--~~--------~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~ 120 (245)
T 3ggd_A 52 LLFNPELPLIDFACGNG--TQ--------TKFLSQFFP-RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIH 120 (245)
T ss_dssp TTSCTTSCEEEETCTTS--HH--------HHHHHHHSS-CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHH
T ss_pred hccCCCCeEEEEcCCCC--HH--------HHHHHHhCC-CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccc
Confidence 34677889999999999 66 667777765 7999999 3799999999887543
Q ss_pred --CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 --EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 --~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+||+|++..+++++ ...+...++..+.++|+|||+|++....
T Consensus 121 ~~~~~d~v~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 121 SEIGDANIYMRTGFHHI-PVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHCSCEEEEESSSTTS-CGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cccCccEEEEcchhhcC-CHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 249999998887776 3337899999999999999998877643
No 86
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.33 E-value=4.5e-12 Score=105.88 Aligned_cols=86 Identities=23% Similarity=0.158 Sum_probs=70.5
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--CceEEEEccccccCCC-CceeEEEecccccccCC
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--LILEVIQNKIENVELP-EKVDIIVSEWMGFYLLH 123 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--~~i~~~~~d~~~~~~~-~~fDlIv~~~~~~~l~~ 123 (252)
..++.+|||+|||+| .+ +..+ + .+++|+|+ .++.++++|+.+++++ ++||+|++..+++ +
T Consensus 65 ~~~~~~vLDiG~G~G--~~--------~~~l---~-~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~---~ 127 (215)
T 2zfu_A 65 RPASLVVADFGCGDC--RL--------ASSI---R-NPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLM---G 127 (215)
T ss_dssp SCTTSCEEEETCTTC--HH--------HHHC---C-SCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCC---S
T ss_pred cCCCCeEEEECCcCC--HH--------HHHh---h-ccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhcc---c
Confidence 467789999999999 54 3333 2 57999999 4688999999998776 7899999977654 2
Q ss_pred hhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 124 ESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 124 ~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++..++..+.++|+|||++++....
T Consensus 128 -~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 128 -TNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred -cCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 57889999999999999999997654
No 87
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.32 E-value=7.4e-12 Score=99.88 Aligned_cols=96 Identities=15% Similarity=0.148 Sum_probs=73.5
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CC-CcEEEeeC------CceEEEEccccccC--------CC-C
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HP-LDHYAPQY------LILEVIQNKIENVE--------LP-E 107 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~-~~v~gvD~------~~i~~~~~d~~~~~--------~~-~ 107 (252)
....++.+|||+|||+| .+ +..+++. ++ .+++++|+ .++.++++|+.+.+ ++ +
T Consensus 18 ~~~~~~~~vLd~G~G~G--~~--------~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 18 KLFKPGMTVVDLGAAPG--GW--------SQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCCCTTCEEEEESCTTC--HH--------HHHHHHHHCTTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCCCeEEEeCCCCC--HH--------HHHHHHHhCCCCeEEEEECccccccCcEEEEEcccccchhhhhhhccCCCC
Confidence 44678889999999999 55 5555554 43 68999998 57899999998875 44 7
Q ss_pred ceeEEEecccccccCChh--h------HHHHHHHHhccccCCeEEEeeccc
Q psy9773 108 KVDIIVSEWMGFYLLHES--M------IDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~--~------~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+||+|+++...++..... . ...++..+.++|+|||.+++....
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 899999977655442221 1 168899999999999999987653
No 88
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.32 E-value=6.4e-12 Score=103.81 Aligned_cols=88 Identities=19% Similarity=0.220 Sum_probs=72.1
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCC-Ccee
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELP-EKVD 110 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~-~~fD 110 (252)
.++ +|||+|||+| .+ +..++..+ .+++|+|+ .++.++++|+..++++ ++||
T Consensus 29 ~~~-~vLdiGcG~G--~~--------~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 96 (202)
T 2kw5_A 29 PQG-KILCLAEGEG--RN--------ACFLASLG-YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWE 96 (202)
T ss_dssp CSS-EEEECCCSCT--HH--------HHHHHTTT-CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCS
T ss_pred CCC-CEEEECCCCC--Hh--------HHHHHhCC-CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCcc
Confidence 456 9999999999 66 66677666 47999999 2789999999998766 7899
Q ss_pred EEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 111 IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 111 lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+|++.. .++ +..++..++..+.++|+|||++++....
T Consensus 97 ~v~~~~--~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 97 GIVSIF--CHL-PSSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp EEEEEC--CCC-CHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred EEEEEh--hcC-CHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 999843 222 4567899999999999999999998754
No 89
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.32 E-value=1.3e-11 Score=106.57 Aligned_cols=89 Identities=18% Similarity=0.218 Sum_probs=71.0
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEccccccCCC-CceeEEEecc
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENVELP-EKVDIIVSEW 116 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~~~~-~~fDlIv~~~ 116 (252)
++.+|||+|||+| .+ +..++..+ .+++|+|+ ....++++|+..++++ ++||+|++..
T Consensus 54 ~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDLGGGTG--KW--------SLFLQERG-FEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEETCTTC--HH--------HHHHHTTT-CEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECS
T ss_pred CCCeEEEeCCCcC--HH--------HHHHHHcC-CeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcc
Confidence 7789999999999 66 66676665 47999999 1123889999998876 7899999965
Q ss_pred cccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 117 MGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 117 ~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++.++. .++..+|..+.++|+|||++++..++
T Consensus 123 ~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 123 DVLSYV--ENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp SHHHHC--SCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred hhhhcc--ccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 443332 34889999999999999999998765
No 90
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.31 E-value=6.6e-12 Score=105.92 Aligned_cols=89 Identities=20% Similarity=0.221 Sum_probs=67.5
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC---------------CceEEEEcccccc----CC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY---------------LILEVIQNKIENV----EL 105 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~---------------~~i~~~~~d~~~~----~~ 105 (252)
...++.+|||+|||+| .+ +..++.. +..+|+|+|+ .++.++.+|+... ++
T Consensus 54 ~~~~g~~VLDlGcGtG--~~--------~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~ 123 (210)
T 1nt2_A 54 KLRGDERVLYLGAASG--TT--------VSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGI 123 (210)
T ss_dssp CCCSSCEEEEETCTTS--HH--------HHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTT
T ss_pred CCCCCCEEEEECCcCC--HH--------HHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhccc
Confidence 4567899999999999 55 5555554 2357999999 4678888898774 33
Q ss_pred CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+++||+|+++. .+......++..+.++|||||+|++...
T Consensus 124 ~~~fD~V~~~~-----~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 124 VEKVDLIYQDI-----AQKNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp CCCEEEEEECC-----CSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccceeEEEEec-----cChhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 47899999863 2223455668999999999999999853
No 91
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.31 E-value=5.2e-12 Score=104.26 Aligned_cols=95 Identities=17% Similarity=0.095 Sum_probs=70.0
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C--CCcEEEeeC------CceEEEEccccccC-----------
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H--PLDHYAPQY------LILEVIQNKIENVE----------- 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g--~~~v~gvD~------~~i~~~~~d~~~~~----------- 104 (252)
....++.+|||+|||+| .+ +..+++. + ..+|+|+|+ .++.++++|+...+
T Consensus 18 ~~~~~~~~vLDlGcG~G--~~--------~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 18 LFLKKNKIILDIGCYPG--SW--------CQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCCCTTEEEEEESCTTC--HH--------HHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-------
T ss_pred CCCCCCCEEEEeCCCCC--HH--------HHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccc
Confidence 34567889999999999 55 5666654 3 257999999 36899999998876
Q ss_pred --------------CC-CceeEEEecccccccCC-hhhH-------HHHHHHHhccccCCeEEEeecc
Q psy9773 105 --------------LP-EKVDIIVSEWMGFYLLH-ESMI-------DSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 --------------~~-~~fDlIv~~~~~~~l~~-~~~~-------~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++ ++||+|+++.+.++... ..+. ..++..+.++|+|||.|++...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 34 68999999765443211 1121 2478889999999999998653
No 92
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.31 E-value=4.9e-12 Score=115.81 Aligned_cols=91 Identities=23% Similarity=0.303 Sum_probs=74.4
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc--CCCcEEEeeC----------C---------------ceEEEEcc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV--HPLDHYAPQY----------L---------------ILEVIQNK 99 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~--g~~~v~gvD~----------~---------------~i~~~~~d 99 (252)
..++.+|||||||+| .+ +..++.. ...+|+|+|+ . ++.++++|
T Consensus 81 ~~~~~~VLDlGcG~G--~~--------~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d 150 (383)
T 4fsd_A 81 SLEGATVLDLGCGTG--RD--------VYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGF 150 (383)
T ss_dssp GGTTCEEEEESCTTS--HH--------HHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESC
T ss_pred CCCCCEEEEecCccC--HH--------HHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEcc
Confidence 457899999999999 55 5555543 2348999999 1 68899999
Q ss_pred cccc------CCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 100 IENV------ELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 100 ~~~~------~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+.++ +++ ++||+|+++.+++++ +++..+|..+.++|+|||+|++....
T Consensus 151 ~~~l~~~~~~~~~~~~fD~V~~~~~l~~~---~d~~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 151 IENLATAEPEGVPDSSVDIVISNCVCNLS---TNKLALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp TTCGGGCBSCCCCTTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHhhhcccCCCCCCCEEEEEEccchhcC---CCHHHHHHHHHHHcCCCCEEEEEEec
Confidence 9987 665 789999998887776 56889999999999999999998653
No 93
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.30 E-value=4.2e-12 Score=111.10 Aligned_cols=97 Identities=11% Similarity=0.071 Sum_probs=72.6
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEccccccCC----
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENVEL---- 105 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~~~---- 105 (252)
+.......++.+|||||||+| .+ +..+++.+ .+|+|+|+ ....+++.++.++..
T Consensus 37 il~~l~l~~g~~VLDlGcGtG--~~--------a~~La~~g-~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~ 105 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIGASTR--FL--------IEKALERG-ASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPK 105 (261)
T ss_dssp HHHTTTCCTTCEEEEECTTCH--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCG
T ss_pred HHHhcCCCCcCEEEEEeCcch--HH--------HHHHHhcC-CEEEEEECCHHHHHHHHHHHHhccceeeeeeccccccc
Confidence 444456788899999999999 66 77778776 47999999 111134455554433
Q ss_pred --CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 --PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 --~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++||+|+++.+++++. ..+...++..+.++| |||+|+++...
T Consensus 106 ~~~~~fD~Vv~~~~l~~~~-~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 106 ELAGHFDFVLNDRLINRFT-TEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GGTTCCSEEEEESCGGGSC-HHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccCCCccEEEEhhhhHhCC-HHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 36899999988877663 346788999999999 99999998653
No 94
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.29 E-value=1.6e-11 Score=103.22 Aligned_cols=83 Identities=16% Similarity=0.100 Sum_probs=68.8
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccCCC-CceeEEEecccc
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVELP-EKVDIIVSEWMG 118 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~~-~~fDlIv~~~~~ 118 (252)
+.+|||+|||+| .+ +..++.. +|+|+ .++.++++|+..++++ ++||+|++..++
T Consensus 48 ~~~vLDiG~G~G--~~--------~~~l~~~-----~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 112 (219)
T 1vlm_A 48 EGRGVEIGVGTG--RF--------AVPLKIK-----IGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTI 112 (219)
T ss_dssp SSCEEEETCTTS--TT--------HHHHTCC-----EEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred CCcEEEeCCCCC--HH--------HHHHHHH-----hccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcchH
Confidence 889999999999 44 4444322 89998 3789999999988776 789999998887
Q ss_pred cccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 119 FYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 119 ~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+++ .++..+|..+.++|+|||++++..+.
T Consensus 113 ~~~---~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 113 CFV---DDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp GGS---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhc---cCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 766 56789999999999999999998653
No 95
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.29 E-value=1.1e-11 Score=103.08 Aligned_cols=94 Identities=17% Similarity=0.152 Sum_probs=70.6
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------CceEEEEccccccCC--------C----
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------LILEVIQNKIENVEL--------P---- 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------~~i~~~~~d~~~~~~--------~---- 106 (252)
....++.+|||||||+| .+ +..+++.+ .+|+|+|+ .++.++++|+.+... +
T Consensus 21 ~~~~~g~~VLDlG~G~G--~~--------s~~la~~~-~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (191)
T 3dou_A 21 RVVRKGDAVIEIGSSPG--GW--------TQVLNSLA-RKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGI 89 (191)
T ss_dssp CCSCTTCEEEEESCTTC--HH--------HHHHTTTC-SEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTC
T ss_pred CCCCCCCEEEEEeecCC--HH--------HHHHHHcC-CcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccC
Confidence 44578899999999999 66 77777764 57999999 478999999988642 1
Q ss_pred CceeEEEecccccccCC--------hhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 107 EKVDIIVSEWMGFYLLH--------ESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~--------~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++||+|+|+........ ......++..+.++|+|||.|++...
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 48999999654221111 01245778888999999999997654
No 96
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.29 E-value=8.8e-12 Score=101.34 Aligned_cols=93 Identities=16% Similarity=0.014 Sum_probs=70.3
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCC--
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVEL-- 105 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~-- 105 (252)
...++.+|||+|||+| .+ +..++..+..+|+|+|+ .++.++++|+.+...
T Consensus 41 ~~~~~~~vLD~GcG~G--~~--------~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 110 (187)
T 2fhp_A 41 PYFDGGMALDLYSGSG--GL--------AIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQF 110 (187)
T ss_dssp SCCSSCEEEETTCTTC--HH--------HHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHH
T ss_pred hhcCCCCEEEeCCccC--HH--------HHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHH
Confidence 3467889999999999 65 55566666678999999 258999999987532
Q ss_pred ---CCceeEEEecccccccCChhhHHHHHHHH--hccccCCeEEEeeccccc
Q psy9773 106 ---PEKVDIIVSEWMGFYLLHESMIDSVIFAR--DKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 106 ---~~~fDlIv~~~~~~~l~~~~~~~~~l~~l--~~~LkpgG~lv~~~~~~~ 152 (252)
.++||+|+++...+ . .....++..+ .++|+|||++++..+...
T Consensus 111 ~~~~~~fD~i~~~~~~~-~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 111 YEEKLQFDLVLLDPPYA-K---QEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHTTCCEEEEEECCCGG-G---CCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HhcCCCCCEEEECCCCC-c---hhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 47899999976522 2 2345566666 899999999999876543
No 97
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.29 E-value=1.7e-11 Score=102.70 Aligned_cols=86 Identities=9% Similarity=-0.050 Sum_probs=69.5
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------C-ceEEEEccccccC-CC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------L-ILEVIQNKIENVE-LP 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~-~i~~~~~d~~~~~-~~ 106 (252)
...++.+|||+|||+| .+ +..+++.+ .+|+|+|+ . ++.++++|+.... ..
T Consensus 52 ~~~~~~~vLDlGcG~G--~~--------~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~ 120 (204)
T 3njr_A 52 APRRGELLWDIGGGSG--SV--------SVEWCLAG-GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL 120 (204)
T ss_dssp CCCTTCEEEEETCTTC--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS
T ss_pred CCCCCCEEEEecCCCC--HH--------HHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC
Confidence 4677899999999999 66 66777774 68999999 3 7999999998843 33
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+||+|++... + +.. ++..+.++|+|||+|++....
T Consensus 121 ~~~D~v~~~~~---~----~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 121 PLPEAVFIGGG---G----SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp CCCSEEEECSC---C----CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred CCCCEEEECCc---c----cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 68999998552 2 355 899999999999999998764
No 98
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.28 E-value=1.9e-11 Score=103.85 Aligned_cols=88 Identities=22% Similarity=0.231 Sum_probs=69.1
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC---------------CceEEEEccccc----cC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY---------------LILEVIQNKIEN----VE 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~---------------~~i~~~~~d~~~----~~ 104 (252)
....++.+|||+|||+| .+ +..++.. |..+|+|+|+ .++.++.+|+.. .+
T Consensus 70 ~~~~~~~~VLDlGcG~G--~~--------~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~ 139 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAG--TT--------PSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYAN 139 (230)
T ss_dssp CCCCTTCEEEEESCCSS--HH--------HHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTT
T ss_pred cCCCCCCEEEEEcccCC--HH--------HHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccc
Confidence 44567899999999999 66 6666665 4468999999 468899999987 55
Q ss_pred CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEee
Q psy9773 105 LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 105 ~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~ 147 (252)
++++||+|++. +........++..+.++|+|||++++.
T Consensus 140 ~~~~~D~v~~~-----~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 140 IVEKVDVIYED-----VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp TSCCEEEEEEC-----CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCccEEEEEEe-----cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 55789999842 233334577899999999999999996
No 99
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.28 E-value=8.5e-12 Score=107.90 Aligned_cols=95 Identities=15% Similarity=0.176 Sum_probs=72.9
Q ss_pred CCCC-CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCC
Q psy9773 45 PNIF-AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVEL 105 (252)
Q Consensus 45 ~~~~-~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~ 105 (252)
.... ++.+|||+|||+| .+ +..++..+..+|+|+|+ .++.++++|+.++..
T Consensus 44 ~~~~~~~~~vLDlG~G~G--~~--------~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~ 113 (259)
T 3lpm_A 44 SYLPIRKGKIIDLCSGNG--II--------PLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD 113 (259)
T ss_dssp CCCCSSCCEEEETTCTTT--HH--------HHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG
T ss_pred hcCCCCCCEEEEcCCchh--HH--------HHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh
Confidence 3456 7899999999999 66 77777766558999999 369999999998863
Q ss_pred ---CCceeEEEeccccccc-----CC------------hhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 ---PEKVDIIVSEWMGFYL-----LH------------ESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ---~~~fDlIv~~~~~~~l-----~~------------~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.++||+|++++..+.. .. ..++..++..+.++|+|||+|++..+
T Consensus 114 ~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 114 LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 3789999997643221 01 12467899999999999999999653
No 100
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.28 E-value=5.9e-12 Score=102.03 Aligned_cols=92 Identities=16% Similarity=0.083 Sum_probs=70.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEcccccc-C-CC
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENV-E-LP 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~-~-~~ 106 (252)
..++.+|||+|||+| .+ +..+++.+..+|+|+|+ .++.++++|+.+. + .+
T Consensus 29 ~~~~~~vLDlGcG~G--~~--------~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 98 (177)
T 2esr_A 29 YFNGGRVLDLFAGSG--GL--------AIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLT 98 (177)
T ss_dssp CCCSCEEEEETCTTC--HH--------HHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBC
T ss_pred hcCCCeEEEeCCCCC--HH--------HHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhc
Confidence 567889999999999 66 66666666678999999 2589999999874 2 23
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHh--ccccCCeEEEeeccccc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARD--KFLKPEGVMYPYKCILH 152 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~--~~LkpgG~lv~~~~~~~ 152 (252)
++||+|+++...+ ......++..+. ++|+|||++++......
T Consensus 99 ~~fD~i~~~~~~~----~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 99 GRFDLVFLDPPYA----KETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp SCEEEEEECCSSH----HHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCCEEEECCCCC----cchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 6799999976422 134556666665 99999999999876533
No 101
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.27 E-value=1.9e-11 Score=101.67 Aligned_cols=86 Identities=13% Similarity=0.020 Sum_probs=69.4
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC-
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP- 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~- 106 (252)
....++.+|||+|||+| .+ +..++..+ .+|+++|+ .++.++.+|+.....+
T Consensus 73 l~~~~~~~vLdiG~G~G--~~--------~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 73 LELTPQSRVLEIGTGSG--YQ--------TAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQAR 141 (210)
T ss_dssp TTCCTTCEEEEECCTTS--HH--------HHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred cCCCCCCEEEEEcCCCC--HH--------HHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccC
Confidence 45678899999999999 66 66666664 68999999 3689999999886554
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|++..+.+++.. .+.++|+|||+|++..+.
T Consensus 142 ~~~D~i~~~~~~~~~~~---------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPT---------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCCT---------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEEccchhhhhH---------HHHHhcccCcEEEEEEcC
Confidence 78999999777665532 467999999999998765
No 102
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.26 E-value=6.8e-12 Score=107.23 Aligned_cols=85 Identities=16% Similarity=0.135 Sum_probs=68.0
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC-----------------CceEEEEccccccCC----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------------LILEVIQNKIENVEL---- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~---- 105 (252)
.++.+|||+|||+| .+ +..++. .+..+|+|+|+ .++.++++|+.+++.
T Consensus 69 ~~~~~vLDiG~G~G--~~--------~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 138 (240)
T 1xdz_A 69 NQVNTICDVGAGAG--FP--------SLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDV 138 (240)
T ss_dssp GGCCEEEEECSSSC--TT--------HHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTT
T ss_pred CCCCEEEEecCCCC--HH--------HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccc
Confidence 46789999999999 55 555553 22357999999 369999999988764
Q ss_pred CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.++||+|++..+ .++..++..+.++|+|||+|++...
T Consensus 139 ~~~fD~V~~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 139 RESYDIVTARAV-------ARLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp TTCEEEEEEECC-------SCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred cCCccEEEEecc-------CCHHHHHHHHHHhcCCCCEEEEEeC
Confidence 378999998542 4578999999999999999998753
No 103
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.26 E-value=1.4e-11 Score=101.45 Aligned_cols=95 Identities=13% Similarity=0.094 Sum_probs=71.7
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc--CCCcEEEeeC------------------CceEEEEccccccC-
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV--HPLDHYAPQY------------------LILEVIQNKIENVE- 104 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~--g~~~v~gvD~------------------~~i~~~~~d~~~~~- 104 (252)
...++.+|||+|||+| .+ +..+++. +..+++|+|+ .++.++++|+..++
T Consensus 19 ~~~~~~~vLDlGcG~G--~~--------~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 88 (197)
T 3eey_A 19 FVKEGDTVVDATCGNG--ND--------TAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK 88 (197)
T ss_dssp HCCTTCEEEESCCTTS--HH--------HHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG
T ss_pred cCCCCCEEEEcCCCCC--HH--------HHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh
Confidence 3567899999999999 55 5555554 3358999999 36899999998875
Q ss_pred -CCCceeEEEecccc------cccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 -LPEKVDIIVSEWMG------FYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 -~~~~fDlIv~~~~~------~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+++||+|+++... .......+...++..+.++|+|||++++....
T Consensus 89 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 89 YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 23789999986532 01223335678999999999999999987644
No 104
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.26 E-value=9.8e-12 Score=115.01 Aligned_cols=91 Identities=14% Similarity=0.155 Sum_probs=72.4
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC--------------------------CceEEEE
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY--------------------------LILEVIQ 97 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~--------------------------~~i~~~~ 97 (252)
....++.+|||||||+| .+ ++.++. .++.+++|||+ .++.|++
T Consensus 169 l~l~~gd~VLDLGCGtG--~l--------~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 169 IKMTDDDLFVDLGSGVG--QV--------VLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HCCCTTCEEEEESCTTS--HH--------HHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred cCCCCCCEEEEeCCCCC--HH--------HHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 46788999999999999 54 445543 56556999999 1588999
Q ss_pred ccccccCCC---CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 98 NKIENVELP---EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 98 ~d~~~~~~~---~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+|+.+++++ ..||+|+++... +.+++...|.++.+.|+|||+|++...
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~----F~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFA----FGPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTT----CCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred CcccCCccccccCCccEEEEcccc----cCchHHHHHHHHHHcCCCCcEEEEeec
Confidence 999988764 479999996652 235788889999999999999998754
No 105
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.26 E-value=1.9e-11 Score=100.34 Aligned_cols=95 Identities=15% Similarity=0.147 Sum_probs=69.3
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CC---------CcEEEeeC------CceEEE-EccccccC---
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HP---------LDHYAPQY------LILEVI-QNKIENVE--- 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~---------~~v~gvD~------~~i~~~-~~d~~~~~--- 104 (252)
....++.+|||+|||+| .+ +..+++. +. .+|+|+|+ .++.++ ++|+....
T Consensus 18 ~~~~~~~~vLDlGcG~G--~~--------~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 18 QILRPGLRVLDCGAAPG--AW--------SQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CCCCTTCEEEEETCCSC--HH--------HHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHH
T ss_pred CCCCCCCEEEEeCCCCC--HH--------HHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHH
Confidence 44577899999999999 55 5566654 43 57999999 457888 88887653
Q ss_pred -----CC-CceeEEEecccccccCCh-hhH-------HHHHHHHhccccCCeEEEeecc
Q psy9773 105 -----LP-EKVDIIVSEWMGFYLLHE-SMI-------DSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 -----~~-~~fDlIv~~~~~~~l~~~-~~~-------~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++ ++||+|++....+...+. .+. ..++..+.++|+|||+|++...
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 22 579999996543322211 222 4789999999999999998754
No 106
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.25 E-value=4.8e-11 Score=106.10 Aligned_cols=90 Identities=10% Similarity=0.050 Sum_probs=71.7
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELPE 107 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~~ 107 (252)
..+.++.+|||||||+|+.+. ..+++....+|+|+|+ .+++++++|+.+++ .+
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta---------~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-d~ 187 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTG---------ILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID-GL 187 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHH---------HHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-GC
T ss_pred cCCCCcCEEEEECCCccHHHH---------HHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-CC
Confidence 567899999999999994432 3344432357999999 57999999999876 57
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+||+|++... . ++...++..+.++|+|||+|++....
T Consensus 188 ~FDvV~~~a~---~---~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 188 EFDVLMVAAL---A---EPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp CCSEEEECTT---C---SCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CcCEEEECCC---c---cCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 8999997432 2 57889999999999999999987653
No 107
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.25 E-value=2.7e-11 Score=104.76 Aligned_cols=93 Identities=13% Similarity=0.090 Sum_probs=70.1
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CC-CcEEEeeCC------------------------ceEEEEc
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HP-LDHYAPQYL------------------------ILEVIQN 98 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~-~~v~gvD~~------------------------~i~~~~~ 98 (252)
....++.+|||||||+| .+ +..++.. |+ .+|+|+|+. +++++++
T Consensus 39 ~~~~~~~~vLDiGcG~G--~~--------~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~ 108 (275)
T 3bkx_A 39 WQVKPGEKILEIGCGQG--DL--------SAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFN 108 (275)
T ss_dssp HTCCTTCEEEEESCTTS--HH--------HHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECS
T ss_pred cCCCCCCEEEEeCCCCC--HH--------HHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 35678899999999999 65 5566664 44 589999982 5889999
Q ss_pred c---ccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 99 K---IENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 99 d---~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
| ...++++ ++||+|++..+++++. +...++..+.++++|||++++....
T Consensus 109 d~~~~~~~~~~~~~fD~v~~~~~l~~~~---~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 109 TNLSDDLGPIADQHFDRVVLAHSLWYFA---SANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp CCTTTCCGGGTTCCCSEEEEESCGGGSS---CHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred ChhhhccCCCCCCCEEEEEEccchhhCC---CHHHHHHHHHHHhCCCCEEEEEEec
Confidence 8 3344444 7899999988877774 4455777777777789999987643
No 108
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.25 E-value=1.1e-11 Score=103.33 Aligned_cols=90 Identities=16% Similarity=0.068 Sum_probs=70.8
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------C---ceEEEEccccccCC---C
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------L---ILEVIQNKIENVEL---P 106 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~---~i~~~~~d~~~~~~---~ 106 (252)
++.+|||+|||+| .+ +..++..++.+|+|+|+ . ++.++++|+.++.. .
T Consensus 53 ~~~~vLDlGcGtG--~~--------~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 122 (201)
T 2ift_A 53 HQSECLDGFAGSG--SL--------GFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQN 122 (201)
T ss_dssp TTCEEEETTCTTC--HH--------HHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCS
T ss_pred CCCeEEEcCCccC--HH--------HHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhcc
Confidence 6789999999999 66 66656666678999999 1 68999999987643 3
Q ss_pred Cc-eeEEEecccccccCChhhHHHHHHHH--hccccCCeEEEeeccccc
Q psy9773 107 EK-VDIIVSEWMGFYLLHESMIDSVIFAR--DKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 107 ~~-fDlIv~~~~~~~l~~~~~~~~~l~~l--~~~LkpgG~lv~~~~~~~ 152 (252)
++ ||+|+++... + ......++..+ .++|+|||++++......
T Consensus 123 ~~~fD~I~~~~~~-~---~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 123 QPHFDVVFLDPPF-H---FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp SCCEEEEEECCCS-S---SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCCCEEEECCCC-C---CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 68 9999997752 2 34677788888 778999999999887644
No 109
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.24 E-value=4.1e-12 Score=117.05 Aligned_cols=102 Identities=14% Similarity=0.135 Sum_probs=75.7
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEE-----cc
Q psy9773 35 EAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQ-----NK 99 (252)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~-----~d 99 (252)
..+...+.......++.+|||||||+| .+ +..++..+. +|+|+|+ ..+.... .+
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G--~~--------~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~ 161 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDG--IM--------LRTIQEAGV-RHLGFEPSSGVAAKAREKGIRVRTDFFEKAT 161 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTT--TT--------HHHHHHTTC-EEEEECCCHHHHHHHHTTTCCEECSCCSHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCC--HH--------HHHHHHcCC-cEEEECCCHHHHHHHHHcCCCcceeeechhh
Confidence 334455555556678899999999999 55 666677764 7999999 2233332 23
Q ss_pred ccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 100 IENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 100 ~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
...++++ ++||+|++..+++++ +++..+|..+.++|+|||+|++..+.
T Consensus 162 ~~~l~~~~~~fD~I~~~~vl~h~---~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 162 ADDVRRTEGPANVIYAANTLCHI---PYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp HHHHHHHHCCEEEEEEESCGGGC---TTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HhhcccCCCCEEEEEECChHHhc---CCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 3333333 789999998887777 68899999999999999999998653
No 110
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.24 E-value=3.6e-11 Score=108.45 Aligned_cols=93 Identities=18% Similarity=0.188 Sum_probs=72.3
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC---------------CceEEEEccccccCCCCc
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY---------------LILEVIQNKIENVELPEK 108 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~---------------~~i~~~~~d~~~~~~~~~ 108 (252)
....++.+|||||||+| .+ +..+++..+ .+++++|+ .+++++.+|+. .+.| +
T Consensus 180 ~~~~~~~~vLDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p-~ 247 (348)
T 3lst_A 180 GDFPATGTVADVGGGRG--GF--------LLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFL-REVP-H 247 (348)
T ss_dssp SCCCSSEEEEEETCTTS--HH--------HHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTT-TCCC-C
T ss_pred CCccCCceEEEECCccC--HH--------HHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCC-CCCC-C
Confidence 44567789999999999 55 555555332 46888886 46999999997 3445 8
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
||+|++..++|++. ..+...+|++++++|+|||+|++....
T Consensus 248 ~D~v~~~~vlh~~~-d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 248 ADVHVLKRILHNWG-DEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp CSEEEEESCGGGSC-HHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred CcEEEEehhccCCC-HHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 99999988877763 224579999999999999999987754
No 111
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.24 E-value=2.1e-11 Score=101.11 Aligned_cols=87 Identities=23% Similarity=0.235 Sum_probs=70.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCCCce
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELPEKV 109 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~~~f 109 (252)
..++.+|||+|||+| .+ +..+++.+..+++|+|+ .++.++++|+.+.. +++|
T Consensus 58 ~~~~~~vLDiG~G~G--~~--------~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~f 126 (205)
T 3grz_A 58 MVKPLTVADVGTGSG--IL--------AIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-DGKF 126 (205)
T ss_dssp CSSCCEEEEETCTTS--HH--------HHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-CSCE
T ss_pred ccCCCEEEEECCCCC--HH--------HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-CCCc
Confidence 457889999999999 66 66677776668999999 23899999997753 4789
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+|+++...+ .+..++..+.++|+|||++++....
T Consensus 127 D~i~~~~~~~------~~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 127 DLIVANILAE------ILLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp EEEEEESCHH------HHHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred eEEEECCcHH------HHHHHHHHHHHhcCCCCEEEEEecC
Confidence 9999966532 3578899999999999999997543
No 112
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.24 E-value=1.1e-11 Score=102.75 Aligned_cols=84 Identities=19% Similarity=0.253 Sum_probs=67.5
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC-----------------CceEEEEccccccCCCCcee
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY-----------------LILEVIQNKIENVELPEKVD 110 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~~~fD 110 (252)
++.+|||+|||+| .+ +..++.. +..+++++|+ .++.++++|+..++..++||
T Consensus 65 ~~~~vLDiG~G~G--~~--------~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D 134 (207)
T 1jsx_A 65 QGERFIDVGTGPG--LP--------GIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFD 134 (207)
T ss_dssp CSSEEEEETCTTT--TT--------HHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEE
T ss_pred CCCeEEEECCCCC--HH--------HHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcC
Confidence 5789999999999 54 5555553 3468999999 34899999999887557899
Q ss_pred EEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 111 IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 111 lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+|++..+ .++..++..+.++|+|||++++...
T Consensus 135 ~i~~~~~-------~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 135 GVISRAF-------ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp EEECSCS-------SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred EEEEecc-------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9998442 3567899999999999999999854
No 113
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.23 E-value=2.4e-11 Score=105.22 Aligned_cols=87 Identities=18% Similarity=0.055 Sum_probs=69.3
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC-----------------CceEEEEccccccCCC--
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY-----------------LILEVIQNKIENVELP-- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~-- 106 (252)
..++.+|||||||+| .+ ++.++.. +..+|+++|+ .+++++++|+.+++..
T Consensus 78 ~~~~~~vLDiG~G~G--~~--------~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~ 147 (249)
T 3g89_A 78 WQGPLRVLDLGTGAG--FP--------GLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAG 147 (249)
T ss_dssp CCSSCEEEEETCTTT--TT--------HHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTT
T ss_pred cCCCCEEEEEcCCCC--HH--------HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccc
Confidence 356789999999999 55 5565554 3468999999 4699999999888642
Q ss_pred --CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 --EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 --~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|++..+ .++..++..+.++|+|||+|++..+.
T Consensus 148 ~~~~fD~I~s~a~-------~~~~~ll~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 148 HREAYARAVARAV-------APLCVLSELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp TTTCEEEEEEESS-------CCHHHHHHHHGGGEEEEEEEEEEECS
T ss_pred cCCCceEEEECCc-------CCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 78999998543 35678999999999999999876543
No 114
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.23 E-value=2.2e-11 Score=98.20 Aligned_cols=87 Identities=15% Similarity=0.043 Sum_probs=65.7
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC-----------------C-ceEEEEccccc-cCC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY-----------------L-ILEVIQNKIEN-VEL 105 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~-----------------~-~i~~~~~d~~~-~~~ 105 (252)
...++.+|||+|||+| .+ +..++.. +..+++++|+ . ++ ++.+|+.. ++.
T Consensus 22 ~~~~~~~vldiG~G~G--~~--------~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~ 90 (178)
T 3hm2_A 22 APKPHETLWDIGGGSG--SI--------AIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD 90 (178)
T ss_dssp CCCTTEEEEEESTTTT--HH--------HHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG
T ss_pred cccCCCeEEEeCCCCC--HH--------HHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc
Confidence 4678889999999999 65 5565554 3468999999 2 67 88888754 333
Q ss_pred C-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 P-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 ~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
. ++||+|++....++ ..++..+.++|+|||++++....
T Consensus 91 ~~~~~D~i~~~~~~~~-------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 91 VPDNPDVIFIGGGLTA-------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp CCSCCSEEEECC-TTC-------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred cCCCCCEEEECCcccH-------HHHHHHHHHhcCCCCEEEEEeec
Confidence 3 78999998665332 56888999999999999987754
No 115
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.23 E-value=3.5e-11 Score=103.55 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=73.8
Q ss_pred HHHHHHh---CCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCC-CcEEEeeC---------------CceEEE
Q psy9773 37 YRAAICD---NPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHP-LDHYAPQY---------------LILEVI 96 (252)
Q Consensus 37 ~~~~l~~---~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~-~~v~gvD~---------------~~i~~~ 96 (252)
+..+|.. ...+.+|.+|||+|||+| .+ +..+++ .|+ .+|+|+|+ .++..+
T Consensus 62 laa~i~~gl~~l~ikpG~~VldlG~G~G--~~--------~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V 131 (233)
T 4df3_A 62 LAAALLKGLIELPVKEGDRILYLGIASG--TT--------ASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPI 131 (233)
T ss_dssp HHHHHHTTCSCCCCCTTCEEEEETCTTS--HH--------HHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEE
T ss_pred HHHHHHhchhhcCCCCCCEEEEecCcCC--HH--------HHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEE
Confidence 4445543 256889999999999999 55 556655 344 58999999 678889
Q ss_pred EccccccCC---C-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 97 QNKIENVEL---P-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 97 ~~d~~~~~~---~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.+|...... . .++|+|++.. .+..+...++.++.+.|||||++++..
T Consensus 132 ~~d~~~p~~~~~~~~~vDvVf~d~-----~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 132 LGDARFPEKYRHLVEGVDGLYADV-----AQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ESCTTCGGGGTTTCCCEEEEEECC-----CCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeccCccccccccceEEEEEEec-----cCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 888876532 2 7899998743 333567889999999999999999864
No 116
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.23 E-value=4.3e-11 Score=100.88 Aligned_cols=96 Identities=17% Similarity=0.161 Sum_probs=70.7
Q ss_pred CCCCCCCEEEEEcCC-cCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEcccccc-CCC
Q psy9773 45 PNIFAGKTVLDVGTG-TGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENV-ELP 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcG-tG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~-~~~ 106 (252)
....++.+|||+||| +| .+ +..++..+..+|+|+|+ .++.++++|+..+ +++
T Consensus 51 ~~~~~~~~vLDlG~G~~G--~~--------~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 120 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTA--MM--------ALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVV 120 (230)
T ss_dssp TTCCSSCEEEEECCTTTC--HH--------HHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTC
T ss_pred hhcCCCCEEEEcCCCHHH--HH--------HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcc
Confidence 345688999999999 99 66 66666652368999999 2589999997544 233
Q ss_pred -CceeEEEecccccccC----------------ChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 -EKVDIIVSEWMGFYLL----------------HESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 -~~fDlIv~~~~~~~l~----------------~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|++++..+... ....+..++..+.++|+|||++++..+.
T Consensus 121 ~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 121 EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES
T ss_pred cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 7899999976533221 1123578999999999999999987543
No 117
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.22 E-value=4e-11 Score=107.21 Aligned_cols=93 Identities=17% Similarity=0.048 Sum_probs=72.8
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC-----------------CceEEEEccccccCCCC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY-----------------LILEVIQNKIENVELPE 107 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~~ 107 (252)
...++.+|||+|||+| .+ +..+++. +..+++++|+ .++++..+|+. .+.|.
T Consensus 166 ~~~~~~~vlDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~ 234 (332)
T 3i53_A 166 DWAALGHVVDVGGGSG--GL--------LSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA 234 (332)
T ss_dssp CCGGGSEEEEETCTTS--HH--------HHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC
T ss_pred CCCCCCEEEEeCCChh--HH--------HHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC
Confidence 3345689999999999 55 5555553 3357999997 46999999997 44445
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+||+|++..+++++.. +....+|++++++|+|||+|++....
T Consensus 235 ~~D~v~~~~vlh~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 235 GAGGYVLSAVLHDWDD-LSAVAILRRCAEAAGSGGVVLVIEAV 276 (332)
T ss_dssp SCSEEEEESCGGGSCH-HHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CCcEEEEehhhccCCH-HHHHHHHHHHHHhcCCCCEEEEEeec
Confidence 8999999998877632 24689999999999999999987754
No 118
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.22 E-value=2.4e-11 Score=101.45 Aligned_cols=92 Identities=13% Similarity=0.115 Sum_probs=70.0
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEcccccc-CCC-Cce
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENV-ELP-EKV 109 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~-~~~-~~f 109 (252)
++.+|||+|||+| .+ +..++..++.+|+|+|+ .+++++++|+.++ +.. ++|
T Consensus 54 ~~~~vLDlgcG~G--~~--------~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~f 123 (202)
T 2fpo_A 54 VDAQCLDCFAGSG--AL--------GLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPH 123 (202)
T ss_dssp TTCEEEETTCTTC--HH--------HHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCE
T ss_pred CCCeEEEeCCCcC--HH--------HHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCC
Confidence 6789999999999 66 66666666678999999 2789999999874 433 689
Q ss_pred eEEEecccccccCChhhHHHHHHHHh--ccccCCeEEEeeccccccC
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARD--KFLKPEGVMYPYKCILHSA 154 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~--~~LkpgG~lv~~~~~~~~~ 154 (252)
|+|+++.. ++ ......++..+. ++|+|||+|++........
T Consensus 124 D~V~~~~p-~~---~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~~ 166 (202)
T 2fpo_A 124 NIVFVDPP-FR---RGLLEETINLLEDNGWLADEALIYVESEVENGL 166 (202)
T ss_dssp EEEEECCS-SS---TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGCS
T ss_pred CEEEECCC-CC---CCcHHHHHHHHHhcCccCCCcEEEEEECCCccc
Confidence 99999765 22 245566777764 4699999999988764443
No 119
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.22 E-value=4e-11 Score=101.14 Aligned_cols=86 Identities=19% Similarity=0.147 Sum_probs=68.4
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccccccCC-CCc
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIENVEL-PEK 108 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~~~~-~~~ 108 (252)
....++.+|||+|||+| .+ +..++..+ .+|+|+|+ .++.++++|+..... .++
T Consensus 66 ~~~~~~~~vLdiG~G~G--~~--------~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~ 134 (231)
T 1vbf_A 66 LDLHKGQKVLEIGTGIG--YY--------TALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKP 134 (231)
T ss_dssp TTCCTTCEEEEECCTTS--HH--------HHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCC
T ss_pred cCCCCCCEEEEEcCCCC--HH--------HHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCC
Confidence 45678899999999999 66 66777766 68999999 178999999987332 378
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
||+|++..+.+++. ..+.++|+|||++++..+.
T Consensus 135 fD~v~~~~~~~~~~---------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 135 YDRVVVWATAPTLL---------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp EEEEEESSBBSSCC---------HHHHHTEEEEEEEEEEECS
T ss_pred ccEEEECCcHHHHH---------HHHHHHcCCCcEEEEEEcC
Confidence 99999977765552 3577899999999988764
No 120
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.22 E-value=2.4e-11 Score=106.64 Aligned_cols=87 Identities=11% Similarity=-0.004 Sum_probs=71.5
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCCCCc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVELPEK 108 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~~~~ 108 (252)
..++.+|||+|||+| .+ +..+++.++.+|+|+|+ .++.++++|+.++...++
T Consensus 123 ~~~~~~VLDlgcG~G--~~--------~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~ 192 (278)
T 2frn_A 123 AKPDELVVDMFAGIG--HL--------SLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENI 192 (278)
T ss_dssp CCTTCEEEETTCTTT--TT--------HHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSC
T ss_pred CCCCCEEEEecccCC--HH--------HHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCC
Confidence 456899999999999 66 77888877667999999 348899999999877788
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
||+|++++. .....++..+.++|+|||+|++..+.
T Consensus 193 fD~Vi~~~p-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 193 ADRILMGYV-------VRTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEEEEECCC-------SSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ccEEEECCc-------hhHHHHHHHHHHHCCCCeEEEEEEee
Confidence 999998653 12246778888999999999997765
No 121
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.22 E-value=3.5e-11 Score=102.14 Aligned_cols=91 Identities=18% Similarity=0.198 Sum_probs=69.3
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC---------------CceEEEEcccccc---C
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY---------------LILEVIQNKIENV---E 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~---------------~~i~~~~~d~~~~---~ 104 (252)
....++.+|||+|||+| .+ +..+++. + ..+|+|+|+ .++.++++|+... +
T Consensus 73 ~~~~~~~~vLDlG~G~G--~~--------~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~ 142 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASG--TT--------VSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYR 142 (233)
T ss_dssp CCCCTTCEEEEECCTTS--HH--------HHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGG
T ss_pred ecCCCCCEEEEEcccCC--HH--------HHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhc
Confidence 45677899999999999 66 5666654 2 368999999 4789999999874 2
Q ss_pred C-CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 L-PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~-~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
. .++||+|+++.. .......++..+.++|+|||++++....
T Consensus 143 ~~~~~~D~V~~~~~-----~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 143 MLIAMVDVIFADVA-----QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp GGCCCEEEEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ccCCcEEEEEEcCC-----CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 2 378999999543 2233456688899999999999996543
No 122
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.21 E-value=1.5e-10 Score=105.35 Aligned_cols=91 Identities=18% Similarity=0.204 Sum_probs=72.3
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC----------CceEEEEccccccCCCCceeEEEec
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY----------LILEVIQNKIENVELPEKVDIIVSE 115 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~----------~~i~~~~~d~~~~~~~~~fDlIv~~ 115 (252)
...+.+|||||||+| .+ +..+++. +..+++++|+ .+++++.+|+.+ +.+.. |+|++.
T Consensus 201 ~~~~~~vlDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~p~~-D~v~~~ 268 (368)
T 3reo_A 201 FEGLTTIVDVGGGTG--AV--------ASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFD-GVPKG-DAIFIK 268 (368)
T ss_dssp TTTCSEEEEETCTTS--HH--------HHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCCC-SEEEEE
T ss_pred ccCCCEEEEeCCCcC--HH--------HHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCC-CCCCC-CEEEEe
Confidence 556789999999999 55 5555553 3357899997 579999999987 55544 999998
Q ss_pred ccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 116 WMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 116 ~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++|++. ..+...+|++++++|+|||+|++....
T Consensus 269 ~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 269 WICHDWS-DEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp SCGGGBC-HHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred chhhcCC-HHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 8877763 335778999999999999999987754
No 123
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.21 E-value=9.6e-11 Score=106.60 Aligned_cols=98 Identities=12% Similarity=0.159 Sum_probs=75.2
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC-----------------CceEEEEccccc
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY-----------------LILEVIQNKIEN 102 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~-----------------~~i~~~~~d~~~ 102 (252)
+.......++.+|||||||+| .+ +..+++.. ..+++++|+ .+++++.+|+.
T Consensus 194 l~~~~~~~~~~~vlDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~- 262 (369)
T 3gwz_A 194 VAAAYDFSGAATAVDIGGGRG--SL--------MAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFF- 262 (369)
T ss_dssp HHHHSCCTTCSEEEEETCTTS--HH--------HHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT-
T ss_pred HHHhCCCccCcEEEEeCCCcc--HH--------HHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCC-
Confidence 333344567789999999999 55 55555543 357999997 46999999998
Q ss_pred cCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 103 VELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 103 ~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+.+..||+|++..+++++. ......+|++++++|+|||+|++....
T Consensus 263 ~~~p~~~D~v~~~~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 263 ETIPDGADVYLIKHVLHDWD-DDDVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp TCCCSSCSEEEEESCGGGSC-HHHHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred CCCCCCceEEEhhhhhccCC-HHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 44455899999988887762 334568999999999999999997754
No 124
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.21 E-value=4e-11 Score=110.16 Aligned_cols=93 Identities=18% Similarity=0.206 Sum_probs=76.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCC-Cce
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELP-EKV 109 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~-~~f 109 (252)
..++.+|||+|||+| .+ +..+++.+ .+|+++|+ ..+.++++|+.+...+ ++|
T Consensus 231 ~~~~~~VLDlGcG~G--~~--------~~~la~~g-~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~f 299 (381)
T 3dmg_A 231 GVRGRQVLDLGAGYG--AL--------TLPLARMG-AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARF 299 (381)
T ss_dssp TTTTCEEEEETCTTS--TT--------HHHHHHTT-CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCE
T ss_pred CCCCCEEEEEeeeCC--HH--------HHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCe
Confidence 457789999999999 66 66777776 48999999 2588999999998766 899
Q ss_pred eEEEecccccccC--ChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 110 DIIVSEWMGFYLL--HESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 110 DlIv~~~~~~~l~--~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+|+++...++.. .......++..+.++|+|||++++....
T Consensus 300 D~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 300 DIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp EEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred EEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 9999987755421 2357889999999999999999998654
No 125
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.21 E-value=3.7e-11 Score=108.06 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=76.1
Q ss_pred CCCCC-CCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC-----------------CceEEEEccccccC-
Q psy9773 45 PNIFA-GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY-----------------LILEVIQNKIENVE- 104 (252)
Q Consensus 45 ~~~~~-~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~-----------------~~i~~~~~d~~~~~- 104 (252)
....+ +.+|||||||+| .+ +..+++.. ..+++++|+ .++.++.+|+...+
T Consensus 174 ~~~~~~~~~vlDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 243 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHG--TY--------LAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARN 243 (352)
T ss_dssp CGGGTTCCEEEEETCTTC--HH--------HHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG
T ss_pred CCCcCCCCEEEEeCCCcC--HH--------HHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcc
Confidence 34445 789999999999 55 55555543 357999998 36999999999887
Q ss_pred -CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 -LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 -~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++.||+|++..++|++ ...+...+|++++++|+|||+|++....
T Consensus 244 ~~~~~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 244 FEGGAADVVMLNDCLHYF-DAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp GTTCCEEEEEEESCGGGS-CHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cCCCCccEEEEecccccC-CHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 66789999998887776 3335789999999999999999987754
No 126
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.21 E-value=8.5e-11 Score=99.10 Aligned_cols=89 Identities=21% Similarity=0.210 Sum_probs=67.7
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CC-CcEEEeeC---------------CceEEEEccccccC---
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HP-LDHYAPQY---------------LILEVIQNKIENVE--- 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~-~~v~gvD~---------------~~i~~~~~d~~~~~--- 104 (252)
....++.+|||+|||+| .+ +..+++. |+ .+|+|+|+ .++.++++|+....
T Consensus 69 ~~~~~~~~vLDlG~G~G--~~--------~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 138 (227)
T 1g8a_A 69 FPIKPGKSVLYLGIASG--TT--------ASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYR 138 (227)
T ss_dssp CCCCTTCEEEEETTTST--TH--------HHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGT
T ss_pred cCCCCCCEEEEEeccCC--HH--------HHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhh
Confidence 34668899999999999 55 5666654 33 58999999 37899999998742
Q ss_pred -CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 105 -LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 105 -~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.+++||+|++... .......++..+.++|+|||++++..
T Consensus 139 ~~~~~~D~v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 139 ALVPKVDVIFEDVA-----QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp TTCCCEEEEEECCC-----STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCceEEEECCC-----CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2368999998543 22234455999999999999999873
No 127
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.21 E-value=4e-11 Score=106.36 Aligned_cols=98 Identities=13% Similarity=0.038 Sum_probs=69.7
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEE-EEccccc
Q psy9773 36 AYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEV-IQNKIEN 102 (252)
Q Consensus 36 ~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~-~~~d~~~ 102 (252)
.+..++.......++.+|||+||||| .+ +..++..|+.+|+|+|+ .++.. ...++..
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG--~~--------t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~ 141 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTG--GF--------TDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRY 141 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTS--HH--------HHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCcc--HH--------HHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCcee
Confidence 34455555445567889999999999 76 76777778789999999 22222 2345544
Q ss_pred cC---CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 103 VE---LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 103 ~~---~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+. ++ .+||+|++..+++ ++..+|..+.++|+|||.|++...
T Consensus 142 l~~~~l~~~~fD~v~~d~sf~------sl~~vL~e~~rvLkpGG~lv~lvk 186 (291)
T 3hp7_A 142 AEPVDFTEGLPSFASIDVSFI------SLNLILPALAKILVDGGQVVALVK 186 (291)
T ss_dssp CCGGGCTTCCCSEEEECCSSS------CGGGTHHHHHHHSCTTCEEEEEEC
T ss_pred cchhhCCCCCCCEEEEEeeHh------hHHHHHHHHHHHcCcCCEEEEEEC
Confidence 43 23 3499999866532 346789999999999999998743
No 128
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.21 E-value=4e-11 Score=108.90 Aligned_cols=92 Identities=13% Similarity=0.162 Sum_probs=73.3
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC-----------------CceEEEEcccccc--CCCC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY-----------------LILEVIQNKIENV--ELPE 107 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~-----------------~~i~~~~~d~~~~--~~~~ 107 (252)
..+.+|||||||+| .+ +..+++.. ..+++++|+ .+++++.+|+... ++++
T Consensus 178 ~~~~~vlDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~ 247 (363)
T 3dp7_A 178 HHPKRLLDIGGNTG--KW--------ATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPT 247 (363)
T ss_dssp GCCSEEEEESCTTC--HH--------HHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCC
T ss_pred cCCCEEEEeCCCcC--HH--------HHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCC
Confidence 45689999999999 55 55555532 357999998 3699999999986 3567
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+||+|++..+++++. ..+...+|++++++|+|||+|++....
T Consensus 248 ~~D~v~~~~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 248 GFDAVWMSQFLDCFS-EEEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp CCSEEEEESCSTTSC-HHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CcCEEEEechhhhCC-HHHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 899999988876653 335778999999999999999987654
No 129
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.20 E-value=3.3e-11 Score=97.89 Aligned_cols=90 Identities=19% Similarity=0.109 Sum_probs=68.9
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------CceEEEEccccccCCCCceeEEEeccccc
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------LILEVIQNKIENVELPEKVDIIVSEWMGF 119 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------~~i~~~~~d~~~~~~~~~fDlIv~~~~~~ 119 (252)
.++.+|||+|||+| .+ +..+++.+ +|+|+|+ .++.++++|+.+...+++||+|+++...+
T Consensus 22 ~~~~~vLD~GcG~G--~~--------~~~l~~~~--~v~gvD~s~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 22 LEMKIVLDLGTSTG--VI--------TEQLRKRN--TVVSTDLNIRALESHRGGNLVRADLLCSINQESVDVVVFNPPYV 89 (170)
T ss_dssp CCSCEEEEETCTTC--HH--------HHHHTTTS--EEEEEESCHHHHHTCSSSCEEECSTTTTBCGGGCSEEEECCCCB
T ss_pred CCCCeEEEeccCcc--HH--------HHHHHhcC--cEEEEECCHHHHhcccCCeEEECChhhhcccCCCCEEEECCCCc
Confidence 45679999999999 77 77787776 8999999 57899999998843338999999977644
Q ss_pred ccCCh------hhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 120 YLLHE------SMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 120 ~l~~~------~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
..... .+...++..+.+.| |||++++....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 90 PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 32211 13456777777888 99999987654
No 130
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.20 E-value=8.6e-11 Score=103.04 Aligned_cols=91 Identities=19% Similarity=0.214 Sum_probs=72.6
Q ss_pred CCCEEEEEcCCc---CchhhhhccCccchHHHhhcC-CCcEEEeeC---------------CceEEEEccccccC-----
Q psy9773 49 AGKTVLDVGTGT---GKSILLQGHGVDHHSFCTKVH-PLDHYAPQY---------------LILEVIQNKIENVE----- 104 (252)
Q Consensus 49 ~~~~VLDlGcGt---G~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~---------------~~i~~~~~d~~~~~----- 104 (252)
...+|||||||+ | .+ +..+++.. ..+|+++|+ .++.++++|+.+..
T Consensus 77 ~~~~vLDlGcG~pt~G--~~--------~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~ 146 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQ--NT--------HEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNH 146 (274)
T ss_dssp CCCEEEEETCCSCCSS--CH--------HHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHS
T ss_pred CCCEEEEECCCCCCCC--hH--------HHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhcc
Confidence 447999999999 9 44 44444432 258999999 47899999997631
Q ss_pred ------CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 ------LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ------~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++ .+||+|++..++|++... ++..+|.++.++|+|||+|++....
T Consensus 147 ~~~~~~~d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 147 PDVRRMIDFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHHHHHCCTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred chhhccCCCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEec
Confidence 22 579999999988888655 6899999999999999999998765
No 131
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.20 E-value=4.8e-11 Score=104.44 Aligned_cols=90 Identities=12% Similarity=0.040 Sum_probs=68.5
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------C------ceEEE--EccccccC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------L------ILEVI--QNKIENVE 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~------~i~~~--~~d~~~~~ 104 (252)
....++.+|||||||+| .+ +..+++. .+|+|+|+ . ++.++ ++|+..++
T Consensus 70 ~~~~~g~~VLDlGcGtG--~~--------s~~la~~--~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRG--GW--------SYYAASR--PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP 137 (265)
T ss_dssp TSCCCCEEEEEESCTTS--HH--------HHHHHTS--TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC
T ss_pred CCCCCCCEEEEeCcCCC--HH--------HHHHHHc--CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC
Confidence 45678899999999999 66 6777766 57999998 1 56788 88998876
Q ss_pred CCCceeEEEecccccccCChh-hH---HHHHHHHhccccCCe--EEEeec
Q psy9773 105 LPEKVDIIVSEWMGFYLLHES-MI---DSVIFARDKFLKPEG--VMYPYK 148 (252)
Q Consensus 105 ~~~~fDlIv~~~~~~~l~~~~-~~---~~~l~~l~~~LkpgG--~lv~~~ 148 (252)
+++||+|+|+.+ ++..+.. +. ..+|..+.++|+||| .|++..
T Consensus 138 -~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 138 -VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred -CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 578999999765 4432221 11 137888899999999 998854
No 132
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.20 E-value=2.1e-10 Score=104.43 Aligned_cols=91 Identities=16% Similarity=0.207 Sum_probs=72.7
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC----------CceEEEEccccccCCCCceeEEEec
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY----------LILEVIQNKIENVELPEKVDIIVSE 115 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~----------~~i~~~~~d~~~~~~~~~fDlIv~~ 115 (252)
..++.+|||||||+| .+ +..+++. +..+++++|+ .+++++.+|+.+ +.+.. |+|++.
T Consensus 199 ~~~~~~vlDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~-~~p~~-D~v~~~ 266 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVG--AT--------VAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFK-EVPSG-DTILMK 266 (364)
T ss_dssp TTTCSEEEEETCTTS--HH--------HHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCCC-SEEEEE
T ss_pred ccCCCEEEEeCCCCC--HH--------HHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCC-CCCCC-CEEEeh
Confidence 566789999999999 55 5555553 3357899998 579999999987 66644 999998
Q ss_pred ccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 116 WMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 116 ~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++|++. ..+...+|++++++|+|||+|++....
T Consensus 267 ~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 267 WILHDWS-DQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp SCGGGSC-HHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred HHhccCC-HHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 8877663 346789999999999999999987754
No 133
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.20 E-value=5.6e-11 Score=96.30 Aligned_cols=88 Identities=18% Similarity=0.155 Sum_probs=70.2
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCCC-
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVELP- 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~~- 106 (252)
...++.+|||+|||+| .+ +..++..+ .+++++|+ .++.++++|+......
T Consensus 30 ~~~~~~~vldiG~G~G--~~--------~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTG--GV--------TLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI 98 (192)
T ss_dssp CCCTTCEEEEESCTTS--HH--------HHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS
T ss_pred CCCCCCEEEEECCCCC--HH--------HHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC
Confidence 4678899999999999 66 66777766 68999999 2688999998773222
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|++.... ..+..++..+.++|+|||++++..+.
T Consensus 99 ~~~D~v~~~~~~------~~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 99 PDIDIAVVGGSG------GELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp CCEEEEEESCCT------TCHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred CCCCEEEECCch------HHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 689999986542 24578999999999999999987654
No 134
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.19 E-value=6.9e-11 Score=99.00 Aligned_cols=92 Identities=12% Similarity=0.134 Sum_probs=68.6
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC-----------------CceEEEEccccccC--CC-
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY-----------------LILEVIQNKIENVE--LP- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~-----------------~~i~~~~~d~~~~~--~~- 106 (252)
.++.+|||+|||+| .+ +..++... ..+++|+|+ .++.++++|+..++ ++
T Consensus 40 ~~~~~vLDiGcG~G--~~--------~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 109 (214)
T 1yzh_A 40 NDNPIHVEVGSGKG--AF--------VSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFED 109 (214)
T ss_dssp SCCCEEEEESCTTS--HH--------HHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCT
T ss_pred CCCCeEEEEccCcC--HH--------HHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCC
Confidence 45789999999999 55 55565543 358999999 47999999999876 44
Q ss_pred CceeEEEecccccccC--Chh---hHHHHHHHHhccccCCeEEEeecc
Q psy9773 107 EKVDIIVSEWMGFYLL--HES---MIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~--~~~---~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++||+|++++...+.. +.. ....++..+.++|+|||+|++.+.
T Consensus 110 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 110 GEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp TCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 7899999865322110 000 236789999999999999999764
No 135
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.19 E-value=6.9e-11 Score=105.46 Aligned_cols=92 Identities=12% Similarity=0.116 Sum_probs=66.0
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------------CceEEEEc-cccccC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------------LILEVIQN-KIENVE 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------------~~i~~~~~-d~~~~~ 104 (252)
....++.+|||||||+| .+ +..+++. .+|+|+|+ .++.++++ |+..++
T Consensus 78 ~~~~~g~~VLDlGcG~G--~~--------s~~la~~--~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~ 145 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRG--GW--------SYYCGGL--KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP 145 (305)
T ss_dssp TSSCCCEEEEEETCTTS--HH--------HHHHHTS--TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC
T ss_pred CCCCCCCEEEEEcCCCC--HH--------HHHHHhc--CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC
Confidence 44567899999999999 66 6777766 36899875 24778888 887764
Q ss_pred CCCceeEEEecccccccCChhhH---HHHHHHHhccccCCeEEEeecc
Q psy9773 105 LPEKVDIIVSEWMGFYLLHESMI---DSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ~~~~fDlIv~~~~~~~l~~~~~~---~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+.+||+|+|+.+.+...+..+. ..+|..+.++|+|||.|++...
T Consensus 146 -~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 146 -PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp -CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred -cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 3689999997654311111121 2578888899999999998543
No 136
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.19 E-value=2.1e-11 Score=102.15 Aligned_cols=92 Identities=15% Similarity=-0.044 Sum_probs=67.6
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC---------------------CceEEEEccccccC
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY---------------------LILEVIQNKIENVE 104 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~---------------------~~i~~~~~d~~~~~ 104 (252)
..++.+|||+|||+| .+ +..++..+ ..+|+|+|+ .++.++++|+.+++
T Consensus 25 ~~~~~~vLDiGcG~G--~~--------~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~ 94 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDG--KH--------PYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP 94 (218)
T ss_dssp TTSSEEEEEESCTTC--HH--------HHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC
T ss_pred ccCCCEEEEecCCCC--HH--------HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC
Confidence 467889999999999 55 55666653 357999999 26899999999988
Q ss_pred CC-CceeEEEecccccccC--ChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 LP-EKVDIIVSEWMGFYLL--HESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ~~-~~fDlIv~~~~~~~l~--~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++ ++ |.|++........ +..+...++..+.++|+|||+|++...
T Consensus 95 ~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 95 PLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp SCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 77 44 7776422111111 223457899999999999999999654
No 137
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.19 E-value=8.4e-11 Score=107.74 Aligned_cols=101 Identities=11% Similarity=0.024 Sum_probs=74.2
Q ss_pred HHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC--------------------CceEEEEc
Q psy9773 40 AICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY--------------------LILEVIQN 98 (252)
Q Consensus 40 ~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~--------------------~~i~~~~~ 98 (252)
.+.......++.+|||+|||+| .+ +..+++.+ ..+|+|+|+ .++.++.+
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G--~~--------s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~ 282 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNG--VI--------GLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 282 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTC--HH--------HHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEEC
T ss_pred HHHHhCcccCCCeEEEEeCcch--HH--------HHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEec
Confidence 3444445566689999999999 66 67777764 368999999 14788999
Q ss_pred cccccCCCCceeEEEecccccccCC--hhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 99 KIENVELPEKVDIIVSEWMGFYLLH--ESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 99 d~~~~~~~~~fDlIv~~~~~~~l~~--~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+.....+++||+|++++.++.... ......++..+.++|+|||++++..+.
T Consensus 283 D~~~~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 283 NALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp STTTTCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred hhhccCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 9988544478999999876553211 223457899999999999999997643
No 138
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.18 E-value=6.9e-11 Score=109.00 Aligned_cols=101 Identities=18% Similarity=0.218 Sum_probs=74.4
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCC------cCchhhhhccCccchHHHhhc-CCCcEEEeeC--------CceEEEEcc
Q psy9773 35 EAYRAAICDNPNIFAGKTVLDVGTG------TGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY--------LILEVIQNK 99 (252)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~VLDlGcG------tG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~--------~~i~~~~~d 99 (252)
..|...+.. ...++.+||||||| +|+..+ . ++... +..+|+|+|+ .+++|+++|
T Consensus 204 ~~Ye~lL~~--l~~~~~rVLDIGCG~~~~~~TGG~Sl--------~-la~~~fP~a~V~GVDiSp~m~~~~~rI~fv~GD 272 (419)
T 3sso_A 204 PHYDRHFRD--YRNQQVRVLEIGVGGYKHPEWGGGSL--------R-MWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGD 272 (419)
T ss_dssp HHHHHHHGG--GTTSCCEEEEECCSCTTCSSCCCHHH--------H-HHHHHCTTCEEEEEESSCCGGGCBTTEEEEECC
T ss_pred HHHHHHHHh--hcCCCCEEEEEecCCCcCCCCCHHHH--------H-HHHHhCCCCEEEEEECCHHHhhcCCCcEEEEec
Confidence 345554432 23457899999999 774444 2 22222 3358999999 689999999
Q ss_pred ccccCCC-------CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 100 IENVELP-------EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 100 ~~~~~~~-------~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+.++++. ++||+|+++.. ++ ..+...+|..+.++|||||+|++....
T Consensus 273 a~dlpf~~~l~~~d~sFDlVisdgs-H~---~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 273 QNDAEFLDRIARRYGPFDIVIDDGS-HI---NAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp TTCHHHHHHHHHHHCCEEEEEECSC-CC---HHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccccchhhhhhcccCCccEEEECCc-cc---chhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9987654 78999999643 33 367889999999999999999997653
No 139
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.18 E-value=7.7e-11 Score=103.75 Aligned_cols=90 Identities=14% Similarity=0.121 Sum_probs=68.4
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------C------ceEEE--EccccccC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------L------ILEVI--QNKIENVE 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~------~i~~~--~~d~~~~~ 104 (252)
....++.+|||||||+| .+ +..+++. .+|+|+|+ . ++.++ ++|+..++
T Consensus 78 ~~~~~g~~VLDlGcGtG--~~--------s~~la~~--~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 78 GGVELKGTVVDLGCGRG--SW--------SYYAASQ--PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME 145 (276)
T ss_dssp TSCCCCEEEEEESCTTC--HH--------HHHHHTS--TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC
T ss_pred CCCCCCCEEEEeccCCC--HH--------HHHHHHc--CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC
Confidence 45667899999999999 66 6777766 47999998 1 57888 89998876
Q ss_pred CCCceeEEEecccccccCChh-hH---HHHHHHHhccccCCe--EEEeec
Q psy9773 105 LPEKVDIIVSEWMGFYLLHES-MI---DSVIFARDKFLKPEG--VMYPYK 148 (252)
Q Consensus 105 ~~~~fDlIv~~~~~~~l~~~~-~~---~~~l~~l~~~LkpgG--~lv~~~ 148 (252)
+++||+|+|+.+ ++..+.. +. ..+|..+.++|+||| .|++..
T Consensus 146 -~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 146 -PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred -CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 578999999765 4432211 11 137888999999999 998854
No 140
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.18 E-value=8e-11 Score=94.81 Aligned_cols=84 Identities=21% Similarity=0.200 Sum_probs=67.6
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC-C
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP-E 107 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~-~ 107 (252)
...++.+|||+|||+| .+ +..++. +..+++|+|+ .++.++++|+.+ +++ +
T Consensus 32 ~~~~~~~vLdiG~G~G--~~--------~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~ 99 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSG--GM--------TVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKL 99 (183)
T ss_dssp CCCTTCEEEEESCCCS--HH--------HHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGC
T ss_pred CCCCCCEEEEeCCCCC--HH--------HHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCC
Confidence 4567889999999999 66 666666 4568999999 368999999987 444 7
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+||+|++..+ .++..++..+.++ |||++++..+.
T Consensus 100 ~~D~i~~~~~-------~~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 100 EFNKAFIGGT-------KNIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp CCSEEEECSC-------SCHHHHHHHHHHT--TCCEEEEEESC
T ss_pred CCcEEEECCc-------ccHHHHHHHHhhC--CCCEEEEEecc
Confidence 8999999664 4567888888877 99999998754
No 141
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.17 E-value=1.2e-10 Score=103.65 Aligned_cols=92 Identities=12% Similarity=0.169 Sum_probs=74.0
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC-----------------CceEEEEccccccCCCCce
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY-----------------LILEVIQNKIENVELPEKV 109 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~~~f 109 (252)
.++.+|||+|||+| .+ +..+++. +..+++++|+ .++.++.+|+.+.+++..|
T Consensus 164 ~~~~~vlDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 233 (335)
T 2r3s_A 164 IEPLKVLDISASHG--LF--------GIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDY 233 (335)
T ss_dssp CCCSEEEEETCTTC--HH--------HHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCE
T ss_pred CCCCEEEEECCCcC--HH--------HHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCC
Confidence 66789999999999 55 5555554 2357999997 3699999999987766669
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+|++..+++++ ...+...++.++.++|+|||++++....
T Consensus 234 D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 234 DLVLLPNFLHHF-DVATCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp EEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cEEEEcchhccC-CHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 999998887766 3346789999999999999999887654
No 142
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.17 E-value=9.3e-11 Score=97.81 Aligned_cols=87 Identities=17% Similarity=0.007 Sum_probs=66.8
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-C-CcEEEeeC-----------------CceEEEEccccccCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-P-LDHYAPQY-----------------LILEVIQNKIENVEL 105 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~-~~v~gvD~-----------------~~i~~~~~d~~~~~~ 105 (252)
....++.+|||+|||+| .+ +..++..+ + .+|+++|+ .++.++.+|+.....
T Consensus 73 ~~~~~~~~vLdiG~G~G--~~--------~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 142 (215)
T 2yxe_A 73 LDLKPGMKVLEIGTGCG--YH--------AAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE 142 (215)
T ss_dssp TTCCTTCEEEEECCTTS--HH--------HHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG
T ss_pred hCCCCCCEEEEECCCcc--HH--------HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC
Confidence 45678899999999999 55 55555543 2 58999999 358899999865433
Q ss_pred -CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 -PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 -~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++||+|++..+.+++. ..+.++|+|||++++..+.
T Consensus 143 ~~~~fD~v~~~~~~~~~~---------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 143 PLAPYDRIYTTAAGPKIP---------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GGCCEEEEEESSBBSSCC---------HHHHHTEEEEEEEEEEESS
T ss_pred CCCCeeEEEECCchHHHH---------HHHHHHcCCCcEEEEEECC
Confidence 37899999977765552 3678999999999998764
No 143
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.17 E-value=1.4e-10 Score=101.97 Aligned_cols=58 Identities=14% Similarity=0.252 Sum_probs=47.5
Q ss_pred ceEEEEccccccCCC--CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 92 ILEVIQNKIENVELP--EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 92 ~i~~~~~d~~~~~~~--~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++.|.++|+.+.+++ ++||+|+|..++.++ .......++..+++.|+|||+|++....
T Consensus 195 ~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 195 YVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp TEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred cCeEEecccCCCCCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 377889999886554 789999998888777 3345689999999999999999997653
No 144
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.17 E-value=2.1e-10 Score=104.35 Aligned_cols=91 Identities=16% Similarity=0.158 Sum_probs=71.4
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC----------CceEEEEccccccCCCCceeEEEec
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY----------LILEVIQNKIENVELPEKVDIIVSE 115 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~----------~~i~~~~~d~~~~~~~~~fDlIv~~ 115 (252)
..++.+|||||||+| .+ +..+++.++ .+++++|+ .+++++.+|+.. +.+. ||+|++.
T Consensus 207 ~~~~~~vLDvG~G~G--~~--------~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~~-~D~v~~~ 274 (372)
T 1fp1_D 207 FEGISTLVDVGGGSG--RN--------LELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFA-SVPQ-GDAMILK 274 (372)
T ss_dssp TTTCSEEEEETCTTS--HH--------HHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCC-EEEEEEE
T ss_pred cCCCCEEEEeCCCCc--HH--------HHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCccc-CCCC-CCEEEEe
Confidence 556789999999999 55 555555433 46888896 579999999987 5555 9999998
Q ss_pred ccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 116 WMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 116 ~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++|++.. .....+|++++++|+|||+|++....
T Consensus 275 ~~lh~~~d-~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 275 AVCHNWSD-EKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp SSGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cccccCCH-HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 88777632 23459999999999999999988654
No 145
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.17 E-value=2.3e-10 Score=102.12 Aligned_cols=91 Identities=14% Similarity=0.109 Sum_probs=72.1
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC-----------------CceEEEEccccccCCCCc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY-----------------LILEVIQNKIENVELPEK 108 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~~~ 108 (252)
... .+|||+|||+| .+ +..+++. +..+++++|+ .+++++.+|+.+ +.+++
T Consensus 166 ~~~-~~vlDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 233 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSG--EL--------TKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPSN 233 (334)
T ss_dssp CTT-CEEEEETCTTC--HH--------HHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCSS
T ss_pred CCC-CEEEEeCCCch--HH--------HHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCCC
Confidence 344 89999999999 55 5555554 2357999997 369999999987 55678
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
||+|++..+++++. ......++.++.++|+|||++++....
T Consensus 234 ~D~v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 234 GDIYLLSRIIGDLD-EAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp CSEEEEESCGGGCC-HHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCEEEEchhccCCC-HHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 99999988877663 335669999999999999999998754
No 146
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.16 E-value=2.6e-11 Score=102.59 Aligned_cols=79 Identities=18% Similarity=0.147 Sum_probs=65.0
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccc-cccCCC--CceeE
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKI-ENVELP--EKVDI 111 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~-~~~~~~--~~fDl 111 (252)
..++.+|||+|||+| .+ +..++..+ .+|+|+|+ .++.++++|+ ..++++ ++||+
T Consensus 46 ~~~~~~vLDiGcG~G--~~--------~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~ 114 (226)
T 3m33_A 46 LTPQTRVLEAGCGHG--PD--------AARFGPQA-ARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGL 114 (226)
T ss_dssp CCTTCEEEEESCTTS--HH--------HHHHGGGS-SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEE
T ss_pred CCCCCeEEEeCCCCC--HH--------HHHHHHcC-CEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEE
Confidence 367899999999999 66 67777776 47999999 5699999999 455554 78999
Q ss_pred EEecccccccCChhhHHHHHHHHhccccCCeEEE
Q psy9773 112 IVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMY 145 (252)
Q Consensus 112 Iv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv 145 (252)
|++. .++..++..+.++|+|||+|+
T Consensus 115 v~~~---------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 115 IVSR---------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEE---------SCCSGGGGGHHHHEEEEEEEE
T ss_pred EEeC---------CCHHHHHHHHHHHcCCCcEEE
Confidence 9984 245577889999999999999
No 147
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.16 E-value=4.8e-11 Score=101.24 Aligned_cols=90 Identities=16% Similarity=0.125 Sum_probs=66.5
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC-----------------CceEEEEcccccc-C--CC-
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY-----------------LILEVIQNKIENV-E--LP- 106 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~-----------------~~i~~~~~d~~~~-~--~~- 106 (252)
.+.+|||||||+| .+ +..++...+ .+|+|+|+ .++.++++|+..+ + ++
T Consensus 34 ~~~~vLDiGcG~G--~~--------~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~ 103 (218)
T 3dxy_A 34 EAPVTLEIGFGMG--AS--------LVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPD 103 (218)
T ss_dssp CCCEEEEESCTTC--HH--------HHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCT
T ss_pred CCCeEEEEeeeCh--HH--------HHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCC
Confidence 6689999999999 55 556665433 57999999 4799999999885 2 33
Q ss_pred CceeEEEecccccccCChhhH------HHHHHHHhccccCCeEEEeecc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMI------DSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~------~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++||.|++.....+. ..... ..++..+.++|+|||+|++.+.
T Consensus 104 ~~~d~v~~~~~~p~~-~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 104 NSLRMVQLFFPDPWH-KARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp TCEEEEEEESCCCCC-SGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CChheEEEeCCCCcc-chhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 899999985322211 11111 2589999999999999999874
No 148
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.16 E-value=2.9e-12 Score=109.00 Aligned_cols=87 Identities=15% Similarity=0.004 Sum_probs=70.7
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCCCCce
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVELPEKV 109 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~~~~f 109 (252)
.++.+|||+|||+| .+ +..++..+ .+|+|+|+ .++.++++|+.+++..++|
T Consensus 77 ~~~~~vLD~gcG~G--~~--------~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 145 (241)
T 3gdh_A 77 FKCDVVVDAFCGVG--GN--------TIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKA 145 (241)
T ss_dssp SCCSEEEETTCTTS--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCC
T ss_pred cCCCEEEECccccC--HH--------HHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCC
Confidence 37899999999999 66 66777776 68999999 2789999999988755899
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
|+|+++...++. ......+..+.++|+|||++++..
T Consensus 146 D~v~~~~~~~~~---~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 146 DVVFLSPPWGGP---DYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SEEEECCCCSSG---GGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CEEEECCCcCCc---chhhhHHHHHHhhcCCcceeHHHH
Confidence 999998775554 334446677889999999987765
No 149
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.16 E-value=6.3e-11 Score=94.70 Aligned_cols=87 Identities=9% Similarity=-0.112 Sum_probs=65.8
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------C-ceEEEEccccccCC-----CC
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------L-ILEVIQNKIENVEL-----PE 107 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~-~i~~~~~d~~~~~~-----~~ 107 (252)
++.+|||+|||+| .+ +..++..++. ++|+|+ . ++.++++|+.+... .+
T Consensus 41 ~~~~vLD~GcG~G--~~--------~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 109 (171)
T 1ws6_A 41 RRGRFLDPFAGSG--AV--------GLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGE 109 (171)
T ss_dssp TCCEEEEETCSSC--HH--------HHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTC
T ss_pred CCCeEEEeCCCcC--HH--------HHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCC
Confidence 7789999999999 66 6677777655 999999 1 68999999887421 13
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHh--ccccCCeEEEeecccc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARD--KFLKPEGVMYPYKCIL 151 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~--~~LkpgG~lv~~~~~~ 151 (252)
+||+|+++...+ . ....++..+. ++|+|||++++..+..
T Consensus 110 ~~D~i~~~~~~~--~---~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 110 RFTVAFMAPPYA--M---DLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CEEEEEECCCTT--S---CTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred ceEEEEECCCCc--h---hHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 799999976533 2 2334455555 9999999999987753
No 150
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.16 E-value=7.2e-11 Score=116.94 Aligned_cols=91 Identities=12% Similarity=0.001 Sum_probs=74.7
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC--CcEEEeeC-----------------------CceEEEEccccc
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP--LDHYAPQY-----------------------LILEVIQNKIEN 102 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~--~~v~gvD~-----------------------~~i~~~~~d~~~ 102 (252)
.++.+|||||||+| .+ +..+++.+. .+|+|+|+ .++.++++|+..
T Consensus 720 ~~g~rVLDVGCGTG--~l--------ai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d 789 (950)
T 3htx_A 720 SSASTLVDFGCGSG--SL--------LDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE 789 (950)
T ss_dssp SCCSEEEEETCSSS--HH--------HHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS
T ss_pred cCCCEEEEECCCCC--HH--------HHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh
Confidence 47889999999999 66 677777653 58999999 148999999999
Q ss_pred cCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 103 VELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 103 ~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++++ ++||+|++..+++++.. +....++..+.++|+|| ++++..+.
T Consensus 790 Lp~~d~sFDlVV~~eVLeHL~d-p~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 790 FDSRLHDVDIGTCLEVIEHMEE-DQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp CCTTSCSCCEEEEESCGGGSCH-HHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred CCcccCCeeEEEEeCchhhCCh-HHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 9877 89999999888887733 24557999999999999 77777654
No 151
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.16 E-value=1.5e-10 Score=104.80 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=72.3
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC-----------------CceEEEEccccccCCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY-----------------LILEVIQNKIENVELP 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~-----------------~~i~~~~~d~~~~~~~ 106 (252)
....++.+|||||||+| .+ +..++... ..+++++|+ .++.++.+|+.+ +.+
T Consensus 178 ~~~~~~~~vlDvG~G~G--~~--------~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 246 (374)
T 1qzz_A 178 YDWSAVRHVLDVGGGNG--GM--------LAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFK-PLP 246 (374)
T ss_dssp SCCTTCCEEEEETCTTS--HH--------HHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS
T ss_pred CCCCCCCEEEEECCCcC--HH--------HHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCC
Confidence 34567789999999999 55 55555543 257999996 279999999976 344
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
..||+|++..+++++. ......++.++.++|+|||++++...
T Consensus 247 ~~~D~v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 247 VTADVVLLSFVLLNWS-DEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CCEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCEEEEeccccCCC-HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 4599999988877763 22456899999999999999998765
No 152
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.15 E-value=1.1e-10 Score=101.34 Aligned_cols=96 Identities=14% Similarity=0.089 Sum_probs=71.0
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC-------------C--------ceEEEEccccc
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY-------------L--------ILEVIQNKIEN 102 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~-------------~--------~i~~~~~d~~~ 102 (252)
....++.+|||+|||+| .+ +..++... ..+++|+|+ . ++.++++|+.+
T Consensus 32 ~~~~~~~~VLDlG~G~G--~~--------~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~ 101 (260)
T 2ozv_A 32 VADDRACRIADLGAGAG--AA--------GMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTL 101 (260)
T ss_dssp CCCCSCEEEEECCSSSS--HH--------HHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTC
T ss_pred hcccCCCEEEEeCChHh--HH--------HHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHH
Confidence 44567889999999999 66 66666654 358999999 2 38999999988
Q ss_pred cC-------CC-CceeEEEeccccccc---------------CChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 103 VE-------LP-EKVDIIVSEWMGFYL---------------LHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 103 ~~-------~~-~~fDlIv~~~~~~~l---------------~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+. ++ ++||+|++++..+.. .....+..++..+.++|+|||+|++..+.
T Consensus 102 ~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 102 RAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp CHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred HhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 72 33 789999997532211 01124778999999999999999987653
No 153
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.15 E-value=8.2e-11 Score=101.82 Aligned_cols=86 Identities=19% Similarity=0.221 Sum_probs=68.9
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------------Cc--eEEEEccccccCCCCcee
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------------LI--LEVIQNKIENVELPEKVD 110 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------------~~--i~~~~~d~~~~~~~~~fD 110 (252)
..++.+|||+|||+| .+ +..+++.|+ +|+|+|+ .. +.++++|+......++||
T Consensus 118 ~~~~~~VLDiGcG~G--~l--------~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD 186 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSG--VL--------AIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFD 186 (254)
T ss_dssp CCTTCEEEEETCTTS--HH--------HHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEE
T ss_pred cCCCCEEEEecCCCc--HH--------HHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCC
Confidence 467899999999999 77 777888876 8999999 11 788999887742237899
Q ss_pred EEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 111 IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 111 lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+|+++... ..+..++..+.++|+|||+++++..
T Consensus 187 ~Vv~n~~~------~~~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 187 LLVANLYA------ELHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp EEEEECCH------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECCcH------HHHHHHHHHHHHHcCCCCEEEEEee
Confidence 99986542 2357889999999999999999754
No 154
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.15 E-value=1.1e-10 Score=100.09 Aligned_cols=93 Identities=13% Similarity=0.047 Sum_probs=68.5
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc---CCCcEEEeeC--------------C-------c----------
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV---HPLDHYAPQY--------------L-------I---------- 92 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~---g~~~v~gvD~--------------~-------~---------- 92 (252)
..++.+|||+|||+| .+ +..++.. +..+|+|+|+ . +
T Consensus 49 ~~~~~~vLD~gcGsG--~~--------~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (250)
T 1o9g_A 49 GDGPVTLWDPCCGSG--YL--------LTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSER 118 (250)
T ss_dssp CCSCEEEEETTCTTS--HH--------HHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEECCCCCC--HH--------HHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhh
Confidence 346689999999999 55 5555543 2357999999 2 1
Q ss_pred ---------------eE-------------EEEccccccCC-----C-CceeEEEecccccccCC------hhhHHHHHH
Q psy9773 93 ---------------LE-------------VIQNKIENVEL-----P-EKVDIIVSEWMGFYLLH------ESMIDSVIF 132 (252)
Q Consensus 93 ---------------i~-------------~~~~d~~~~~~-----~-~~fDlIv~~~~~~~l~~------~~~~~~~l~ 132 (252)
+. ++++|+..... . .+||+|+|++....... ......++.
T Consensus 119 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~ 198 (250)
T 1o9g_A 119 FGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLR 198 (250)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHH
Confidence 56 99999987642 3 58999999765443322 246778999
Q ss_pred HHhccccCCeEEEeecc
Q psy9773 133 ARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 133 ~l~~~LkpgG~lv~~~~ 149 (252)
.+.++|+|||+|++...
T Consensus 199 ~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 199 SLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHSCTTCEEEEEES
T ss_pred HHHHhcCCCcEEEEeCc
Confidence 99999999999998443
No 155
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.15 E-value=1.1e-10 Score=104.03 Aligned_cols=87 Identities=16% Similarity=-0.008 Sum_probs=68.4
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC--CcEEEeeC-----------------CceEEEEccccccCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP--LDHYAPQY-----------------LILEVIQNKIENVEL 105 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~--~~v~gvD~-----------------~~i~~~~~d~~~~~~ 105 (252)
....++.+|||+|||+| .+ +..+++.+. .+|+|+|+ .++.++.+|+.+...
T Consensus 71 l~~~~~~~VLDiGcG~G--~~--------~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 71 VGLDKGMRVLEIGGGTG--YN--------AAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP 140 (317)
T ss_dssp TTCCTTCEEEEECCTTS--HH--------HHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred cCCCCcCEEEEecCCch--HH--------HHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc
Confidence 45678899999999999 66 666666542 35999999 358999999988644
Q ss_pred C-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 P-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 ~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+ ++||+|++..+.+++. ..+.++|+|||++++....
T Consensus 141 ~~~~fD~Iv~~~~~~~~~---------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 141 EFSPYDVIFVTVGVDEVP---------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp GGCCEEEEEECSBBSCCC---------HHHHHHEEEEEEEEEEBCB
T ss_pred cCCCeEEEEEcCCHHHHH---------HHHHHhcCCCcEEEEEECC
Confidence 3 7899999988766552 4567899999999998654
No 156
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.14 E-value=7.1e-11 Score=100.52 Aligned_cols=87 Identities=13% Similarity=0.131 Sum_probs=68.3
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC------------------CceEEEEccccccCC--
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY------------------LILEVIQNKIENVEL-- 105 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~------------------~~i~~~~~d~~~~~~-- 105 (252)
..++.+|||+|||+| .. +..++... ..+|+++|+ .++.++++|+.....
T Consensus 69 ~~~~~~vLDiG~G~G--~~--------~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 138 (232)
T 3ntv_A 69 MNNVKNILEIGTAIG--YS--------SMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENV 138 (232)
T ss_dssp HHTCCEEEEECCSSS--HH--------HHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHH
T ss_pred hcCCCEEEEEeCchh--HH--------HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhh
Confidence 356789999999999 55 55666532 368999999 379999999987633
Q ss_pred -CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 -PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 -~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.++||+|++... ......++..+.++|+|||+|++...
T Consensus 139 ~~~~fD~V~~~~~------~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 139 NDKVYDMIFIDAA------KAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp TTSCEEEEEEETT------SSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred ccCCccEEEEcCc------HHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 478999997432 24567899999999999999998654
No 157
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.14 E-value=6.4e-11 Score=99.79 Aligned_cols=90 Identities=10% Similarity=0.115 Sum_probs=66.9
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEcccccc-C-
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENV-E- 104 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~-~- 104 (252)
..++.+|||+|||+| .. +..+++. + ..+|+++|+ .+++++++|+... +
T Consensus 56 ~~~~~~vLdiG~G~G--~~--------~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~ 125 (221)
T 3u81_A 56 EYSPSLVLELGAYCG--YS--------AVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQ 125 (221)
T ss_dssp HHCCSEEEEECCTTS--HH--------HHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGG
T ss_pred hcCCCEEEEECCCCC--HH--------HHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHH
Confidence 356789999999999 55 5566653 1 358999999 3699999998654 1
Q ss_pred CC-----CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 LP-----EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~~-----~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+ ++||+|++....++. .....++..+ ++|+|||+|++....
T Consensus 126 ~~~~~~~~~fD~V~~d~~~~~~---~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 126 LKKKYDVDTLDMVFLDHWKDRY---LPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp TTTTSCCCCCSEEEECSCGGGH---HHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred HHHhcCCCceEEEEEcCCcccc---hHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 12 589999996643333 4455677777 999999999998765
No 158
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.14 E-value=5.8e-11 Score=99.22 Aligned_cols=87 Identities=15% Similarity=0.074 Sum_probs=66.4
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC------------------CceEEEEccccccCCCC
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY------------------LILEVIQNKIENVELPE 107 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~------------------~~i~~~~~d~~~~~~~~ 107 (252)
..+..+|||+|||+| .+ ++.++.. +..+++|+|+ .++.+ +|......++
T Consensus 47 l~~~~~VLDlGCG~G--pl--------Al~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~ 114 (200)
T 3fzg_A 47 IKHVSSILDFGCGFN--PL--------ALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKG 114 (200)
T ss_dssp SCCCSEEEEETCTTH--HH--------HHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTS
T ss_pred cCCCCeEEEecCCCC--HH--------HHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCC
Confidence 366889999999999 77 6676554 2248999999 13444 6766655568
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+||+|++..++|++ ++....+.++.+.|+|||+||---
T Consensus 115 ~~DvVLa~k~LHlL---~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 115 TYDVVFLLKMLPVL---KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEEEEEEETCHHHH---HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred CcChhhHhhHHHhh---hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 89999998888888 555666678999999999987543
No 159
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.13 E-value=1.1e-10 Score=98.29 Aligned_cols=92 Identities=12% Similarity=0.135 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC-----------------CceEEEEccccccC--CC-
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY-----------------LILEVIQNKIENVE--LP- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~-----------------~~i~~~~~d~~~~~--~~- 106 (252)
..+.+|||||||+| .+ +..++.. +..+++|+|+ .++.++++|+..++ ++
T Consensus 37 ~~~~~vLDiGcG~G--~~--------~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~ 106 (213)
T 2fca_A 37 NDNPIHIEVGTGKG--QF--------ISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEP 106 (213)
T ss_dssp SCCCEEEEECCTTS--HH--------HHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCT
T ss_pred CCCceEEEEecCCC--HH--------HHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCc
Confidence 35789999999999 55 5555554 2358999999 47899999998864 44
Q ss_pred CceeEEEecccccccC--Chh---hHHHHHHHHhccccCCeEEEeecc
Q psy9773 107 EKVDIIVSEWMGFYLL--HES---MIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~--~~~---~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++||.|++.....+.. +.. ....++..+.++|+|||.|++.+.
T Consensus 107 ~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 107 GEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp TSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 7899998743211110 000 136789999999999999998763
No 160
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.13 E-value=7.2e-11 Score=106.47 Aligned_cols=93 Identities=18% Similarity=0.156 Sum_probs=72.0
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC----------------CceEEEEccccccCCCCce
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY----------------LILEVIQNKIENVELPEKV 109 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~----------------~~i~~~~~d~~~~~~~~~f 109 (252)
..++.+|||+|||+| .+ +..+++.++ .+|+++|+ ..+.++.+|+.... +++|
T Consensus 194 ~~~~~~VLDlGcG~G--~~--------~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~-~~~f 262 (343)
T 2pjd_A 194 PHTKGKVLDVGCGAG--VL--------SVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV-KGRF 262 (343)
T ss_dssp TTCCSBCCBTTCTTS--HH--------HHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC-CSCE
T ss_pred cCCCCeEEEecCccC--HH--------HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc-cCCe
Confidence 345679999999999 66 667777654 48999999 23577888887654 5789
Q ss_pred eEEEecccccccC--ChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 110 DIIVSEWMGFYLL--HESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 110 DlIv~~~~~~~l~--~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+|++++.+++.. +......++..+.++|+|||.+++..+.
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 9999987654321 2346789999999999999999998654
No 161
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.13 E-value=3.2e-10 Score=97.46 Aligned_cols=89 Identities=19% Similarity=0.204 Sum_probs=64.9
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC---------------CceEEEEccccccCC--
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY---------------LILEVIQNKIENVEL-- 105 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~---------------~~i~~~~~d~~~~~~-- 105 (252)
....+|.+|||+|||+| .+ +..++.. + ..+|+|+|+ .++.++++|+.....
T Consensus 72 ~~l~~g~~VLDlG~GtG--~~--------t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~ 141 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASG--TT--------ISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYK 141 (232)
T ss_dssp CSCCTTCEEEEETCTTS--HH--------HHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTT
T ss_pred cCCCCCCEEEEEeecCC--HH--------HHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhh
Confidence 34778999999999999 55 4555542 3 248999999 578999999986532
Q ss_pred --CCceeEEEecccccccCChhhHHH-HHHHHhccccCCeEEEeecc
Q psy9773 106 --PEKVDIIVSEWMGFYLLHESMIDS-VIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 --~~~fDlIv~~~~~~~l~~~~~~~~-~l~~l~~~LkpgG~lv~~~~ 149 (252)
.++||+|+++.. . ++... ++..+.++|+|||+|+++..
T Consensus 142 ~~~~~~D~I~~d~a---~---~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 142 SVVENVDVLYVDIA---Q---PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp TTCCCEEEEEECCC---C---TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccceEEEEecCC---C---hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 268999998643 1 23333 44556669999999998853
No 162
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.13 E-value=2.2e-11 Score=100.71 Aligned_cols=92 Identities=15% Similarity=0.058 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC----------------CceEEEEccccccCCC----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY----------------LILEVIQNKIENVELP---- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~----------------~~i~~~~~d~~~~~~~---- 106 (252)
.++.+|||+|||+| .+ +..++..++ .+++|+|+ .++.++++|+.+....
T Consensus 29 ~~~~~vLDiG~G~G--~~--------~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 98 (215)
T 4dzr_A 29 PSGTRVIDVGTGSG--CI--------AVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAER 98 (215)
T ss_dssp CTTEEEEEEESSBC--HH--------HHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEecCCHh--HH--------HHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhc
Confidence 67889999999999 66 666666543 48999999 1466777777663222
Q ss_pred -CceeEEEecccccccCC-----------------------hhhHHHHHHHHhccccCCeE-EEeecc
Q psy9773 107 -EKVDIIVSEWMGFYLLH-----------------------ESMIDSVIFARDKFLKPEGV-MYPYKC 149 (252)
Q Consensus 107 -~~fDlIv~~~~~~~l~~-----------------------~~~~~~~l~~l~~~LkpgG~-lv~~~~ 149 (252)
++||+|++++..+.... ...+..++..+.++|+|||+ +++..+
T Consensus 99 ~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 99 GRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp TCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred cCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 78999999654221110 00127888999999999999 666543
No 163
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.12 E-value=4.3e-10 Score=101.58 Aligned_cols=94 Identities=16% Similarity=0.140 Sum_probs=73.7
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC-----------------CceEEEEccccccCCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY-----------------LILEVIQNKIENVELP 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~-----------------~~i~~~~~d~~~~~~~ 106 (252)
....++.+|||||||+| .+ +..+++.. ..+++++|+ .++.++.+|+.+.+++
T Consensus 186 ~~~~~~~~vLDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 186 AKLDGVKKMIDVGGGIG--DI--------SAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYP 255 (359)
T ss_dssp CCCTTCCEEEEESCTTC--HH--------HHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC
T ss_pred cCCCCCCEEEEECCccc--HH--------HHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC
Confidence 34567789999999999 55 55655543 357999997 3599999999988665
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
. +|+|++..+++++.. .....+|.++.++|+|||+|++....
T Consensus 256 ~-~D~v~~~~vlh~~~d-~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 256 E-ADAVLFCRILYSANE-QLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp C-CSEEEEESCGGGSCH-HHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred C-CCEEEEechhccCCH-HHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 4 399999888777632 24889999999999999999887643
No 164
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.12 E-value=1.4e-10 Score=99.28 Aligned_cols=92 Identities=21% Similarity=0.256 Sum_probs=71.3
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEccc
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKI 100 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~ 100 (252)
+.......++.+|||+|||+| .+ +..++.. + ..+++++|+ .++.++++|+
T Consensus 85 i~~~~~~~~~~~vldiG~G~G--~~--------~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 154 (255)
T 3mb5_A 85 IVAYAGISPGDFIVEAGVGSG--AL--------TLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDI 154 (255)
T ss_dssp HHHHTTCCTTCEEEEECCTTS--HH--------HHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCG
T ss_pred HHHhhCCCCCCEEEEecCCch--HH--------HHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECch
Confidence 333356788999999999999 55 5566655 3 368999999 2399999999
Q ss_pred cccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 101 ENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 101 ~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+....++||+|+++. +++..++..+.++|+|||++++..+.
T Consensus 155 ~~~~~~~~~D~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 155 YEGIEEENVDHVILDL--------PQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp GGCCCCCSEEEEEECS--------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred hhccCCCCcCEEEECC--------CCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 8764447899998843 24457889999999999999988754
No 165
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.12 E-value=4.2e-10 Score=98.05 Aligned_cols=92 Identities=18% Similarity=0.090 Sum_probs=68.6
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC-----------------CceEEEEccccccCCCCce
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------------LILEVIQNKIENVELPEKV 109 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~~~f 109 (252)
.++.+|||+|||+| .+ +..++. .+..+++|+|+ .++.++++|+.....+++|
T Consensus 108 ~~~~~vLDlG~GsG--~~--------~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~f 177 (276)
T 2b3t_A 108 EQPCRILDLGTGTG--AI--------ALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQF 177 (276)
T ss_dssp SSCCEEEEETCTTS--HH--------HHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCE
T ss_pred cCCCEEEEecCCcc--HH--------HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCc
Confidence 56789999999999 55 555554 33468999999 3689999999875435789
Q ss_pred eEEEeccccccc----------CCh------------hhHHHHHHHHhccccCCeEEEeecc
Q psy9773 110 DIIVSEWMGFYL----------LHE------------SMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 110 DlIv~~~~~~~l----------~~~------------~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
|+|++++..... .+. ..+..++..+.++|+|||++++..+
T Consensus 178 D~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 178 AMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp EEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred cEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 999997432111 011 3567899999999999999999754
No 166
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.12 E-value=4.1e-11 Score=102.82 Aligned_cols=96 Identities=18% Similarity=0.151 Sum_probs=61.0
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEE-Ecccccc
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVI-QNKIENV 103 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~-~~d~~~~ 103 (252)
+.+++........+.+||||||||| .+ +..+++.|+.+|+|+|+ .++... ..++...
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG--~~--------t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~ 94 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTG--GF--------TDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNA 94 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTS--HH--------HHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGC
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCC--HH--------HHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEe
Confidence 4455555445567789999999999 66 66777777778999999 122111 1122221
Q ss_pred C---CCC-ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 104 E---LPE-KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 104 ~---~~~-~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
. ++. .||.+.+..+... +..+|..+.++|+|||+|++..
T Consensus 95 ~~~~~~~~~~d~~~~D~v~~~------l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 95 VLADFEQGRPSFTSIDVSFIS------LDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CGGGCCSCCCSEEEECCSSSC------GGGTHHHHHHHSCTTCEEEEEE
T ss_pred CHhHcCcCCCCEEEEEEEhhh------HHHHHHHHHHhccCCCEEEEEE
Confidence 1 111 2455544333222 2578999999999999999864
No 167
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.11 E-value=2.6e-10 Score=102.84 Aligned_cols=93 Identities=18% Similarity=0.234 Sum_probs=71.7
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC-----------------CceEEEEccccccCCCC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY-----------------LILEVIQNKIENVELPE 107 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~-----------------~~i~~~~~d~~~~~~~~ 107 (252)
...++.+|||||||+| .+ +..++..++ .+++++|+ .++.++.+|+.+ +.+.
T Consensus 180 ~~~~~~~vLDvG~G~G--~~--------~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~ 248 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKG--GF--------AAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR 248 (360)
T ss_dssp CCTTCSEEEEETCTTS--HH--------HHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS
T ss_pred CCccCcEEEEeCCcCc--HH--------HHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC
Confidence 4566789999999999 55 555555433 57899994 279999999976 3444
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.||+|++..+++++. ......++.++.++|+|||++++....
T Consensus 249 ~~D~v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 249 KADAIILSFVLLNWP-DHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp CEEEEEEESCGGGSC-HHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CccEEEEcccccCCC-HHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 599999988877663 234568999999999999999987654
No 168
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.11 E-value=4.6e-10 Score=98.48 Aligned_cols=102 Identities=17% Similarity=0.228 Sum_probs=73.7
Q ss_pred HHHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-C---------------------
Q psy9773 34 NEAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-L--------------------- 91 (252)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-~--------------------- 91 (252)
...+...+.......++.+|||||||+| .+ +..+++.|+.+|+|+|+ .
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G--~~--------~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~ 133 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAG--LV--------SIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSS 133 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTS--HH--------HHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC-----
T ss_pred HHHHHHHHHhcchhcCCCeEEEeccccc--HH--------HHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhccc
Confidence 3445555655444567889999999999 66 67777777668999998 1
Q ss_pred ------ceEEEEcccccc----C---CCCceeEEEecccccccCChhhHHHHHHHHhcccc---C--CeEEEeec
Q psy9773 92 ------ILEVIQNKIENV----E---LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLK---P--EGVMYPYK 148 (252)
Q Consensus 92 ------~i~~~~~d~~~~----~---~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~Lk---p--gG~lv~~~ 148 (252)
++.+...++.+. . ..++||+|++..+++ +..++..++..+.++|+ | ||++++..
T Consensus 134 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~---~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 134 ETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLS---FHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp -----CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCS---CGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred ccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCccc---ChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 355555554332 1 236899999866543 45788899999999999 9 99887654
No 169
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.09 E-value=1.1e-10 Score=98.02 Aligned_cols=88 Identities=15% Similarity=0.053 Sum_probs=67.3
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEccccccCCC
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENVELP 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~~~~ 106 (252)
..++.+|||+|||+| .. +..++.. + ..+++++|+ .+++++++|+......
T Consensus 56 ~~~~~~vLdiG~G~G--~~--------~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 125 (223)
T 3duw_A 56 IQGARNILEIGTLGG--YS--------TIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQ 125 (223)
T ss_dssp HHTCSEEEEECCTTS--HH--------HHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred hhCCCEEEEecCCcc--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHH
Confidence 356789999999999 55 5555554 2 258999999 3599999999765221
Q ss_pred ------CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 ------EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ------~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|++... ......++..+.++|+|||++++....
T Consensus 126 ~~~~~~~~fD~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 126 IENEKYEPFDFIFIDAD------KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp HHHTTCCCCSEEEECSC------GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred HHhcCCCCcCEEEEcCC------cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 57999998543 235678999999999999999987654
No 170
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.09 E-value=3.1e-10 Score=102.61 Aligned_cols=105 Identities=16% Similarity=0.080 Sum_probs=78.2
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC--CCcEEEeeC-----------------CceEEE
Q psy9773 36 AYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH--PLDHYAPQY-----------------LILEVI 96 (252)
Q Consensus 36 ~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g--~~~v~gvD~-----------------~~i~~~ 96 (252)
.+...+.......++.+|||+|||+| ++ +..++..+ ..+++|+|+ .++.++
T Consensus 190 ~la~~l~~~~~~~~~~~vLD~gcGsG--~~--------~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~ 259 (354)
T 3tma_A 190 VLAQALLRLADARPGMRVLDPFTGSG--TI--------ALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFL 259 (354)
T ss_dssp HHHHHHHHHTTCCTTCCEEESSCTTS--HH--------HHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHHhCCCCCCEEEeCCCCcC--HH--------HHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEE
Confidence 34444555466778899999999999 66 66666643 367999999 268999
Q ss_pred EccccccCCC-CceeEEEecccccccCC-----hhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 97 QNKIENVELP-EKVDIIVSEWMGFYLLH-----ESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 97 ~~d~~~~~~~-~~fDlIv~~~~~~~l~~-----~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++|+.+++.+ ..||+|++++....... ......++..+.++|+|||++++.++.
T Consensus 260 ~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 260 RADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp ECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred eCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9999998766 67899999764322111 112467899999999999999998764
No 171
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.07 E-value=4.3e-10 Score=96.39 Aligned_cols=85 Identities=8% Similarity=0.016 Sum_probs=65.3
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhc-----CCCcEEEeeC------------CceEEEEcccccc---CC-C-
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-----HPLDHYAPQY------------LILEVIQNKIENV---EL-P- 106 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-----g~~~v~gvD~------------~~i~~~~~d~~~~---~~-~- 106 (252)
++.+|||||||+| .. +..+++. ...+|+|+|+ .++.++++|+... +. .
T Consensus 81 ~~~~VLDiG~GtG--~~--------t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~ 150 (236)
T 2bm8_A 81 RPRTIVELGVYNG--GS--------LAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLRE 150 (236)
T ss_dssp CCSEEEEECCTTS--HH--------HHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSS
T ss_pred CCCEEEEEeCCCC--HH--------HHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhcc
Confidence 4679999999999 44 4555553 2368999999 3699999999884 32 2
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhc-cccCCeEEEeecc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDK-FLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~-~LkpgG~lv~~~~ 149 (252)
.+||+|++... + .++..+|..+.+ +|+|||+|++...
T Consensus 151 ~~fD~I~~d~~-~-----~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 151 MAHPLIFIDNA-H-----ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SCSSEEEEESS-C-----SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCCCEEEECCc-h-----HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 37999998543 1 256789999997 9999999999764
No 172
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.07 E-value=2.4e-10 Score=97.16 Aligned_cols=85 Identities=21% Similarity=0.205 Sum_probs=64.1
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC--
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP-- 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~-- 106 (252)
...++.+|||+|||+| .+ +..+++.+..+|+++|+ .++.++.+|+ ..+++
T Consensus 88 ~~~~~~~vLdiG~G~G--~~--------~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~ 156 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSG--WN--------AALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPK 156 (235)
T ss_dssp TCCTTCCEEEECCTTS--HH--------HHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGG
T ss_pred CCCCCCEEEEEeCCcC--HH--------HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCC
Confidence 4677889999999999 65 55666543267999998 3688999997 33333
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+||+|++..+.+++ . ..+.++|+|||++++..+.
T Consensus 157 ~~fD~Ii~~~~~~~~---~------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 157 APYDVIIVTAGAPKI---P------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp CCEEEEEECSBBSSC---C------HHHHHTEEEEEEEEEEECS
T ss_pred CCccEEEECCcHHHH---H------HHHHHhcCCCcEEEEEEec
Confidence 469999997765444 2 2567899999999998764
No 173
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.07 E-value=2.2e-10 Score=99.87 Aligned_cols=93 Identities=15% Similarity=0.138 Sum_probs=69.0
Q ss_pred HHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc--CCCcEEEeeC--------------C----ceEEEEcc
Q psy9773 40 AICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV--HPLDHYAPQY--------------L----ILEVIQNK 99 (252)
Q Consensus 40 ~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~--g~~~v~gvD~--------------~----~i~~~~~d 99 (252)
.+.......++.+|||+|||+| .+ +..+++. +..+|+++|+ . ++.++++|
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G--~~--------~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d 170 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSG--NM--------SSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD 170 (275)
T ss_dssp -----CCCCTTCEEEEECCTTS--HH--------HHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC
T ss_pred HHHHHcCCCCcCEEEEecCCCC--HH--------HHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECc
Confidence 3444456778899999999999 55 5566554 2368999999 2 58899999
Q ss_pred ccccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 100 IENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 100 ~~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+......++||+|+++. +++..++..+.++|+|||++++..+.
T Consensus 171 ~~~~~~~~~fD~Vi~~~--------~~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 171 IADFISDQMYDAVIADI--------PDPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp TTTCCCSCCEEEEEECC--------SCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred hhccCcCCCccEEEEcC--------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 98743337899998832 34567899999999999999998865
No 174
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.07 E-value=2.5e-10 Score=96.93 Aligned_cols=100 Identities=7% Similarity=0.074 Sum_probs=71.6
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC-----------------C--ce
Q psy9773 35 EAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY-----------------L--IL 93 (252)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~-----------------~--~i 93 (252)
..+...+.......++.+|||+|||+| .. +..+++. + ..+|+++|+ . ++
T Consensus 42 ~~~l~~l~~~~~~~~~~~vLdiG~G~G--~~--------~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i 111 (221)
T 3dr5_A 42 GQLLTTLAATTNGNGSTGAIAITPAAG--LV--------GLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRV 111 (221)
T ss_dssp HHHHHHHHHHSCCTTCCEEEEESTTHH--HH--------HHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHhhCCCCCCCEEEEcCCch--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcE
Confidence 334444443333334559999999999 54 5555552 2 358999999 2 69
Q ss_pred EEEEccccccC--C-CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 94 EVIQNKIENVE--L-PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 94 ~~~~~d~~~~~--~-~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+++++|+.++. . +++||+|++... ......++..+.++|+|||+|++....
T Consensus 112 ~~~~gda~~~l~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 112 RFLLSRPLDVMSRLANDSYQLVFGQVS------PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp EEECSCHHHHGGGSCTTCEEEEEECCC------TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred EEEEcCHHHHHHHhcCCCcCeEEEcCc------HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 99999987762 3 378999998542 235667899999999999999997654
No 175
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.07 E-value=3.3e-10 Score=97.75 Aligned_cols=83 Identities=13% Similarity=0.169 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC------------CceEEEEccccccCCC-CceeEEE
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY------------LILEVIQNKIENVELP-EKVDIIV 113 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~------------~~i~~~~~d~~~~~~~-~~fDlIv 113 (252)
.++.+|||+|||+| .+ +..++.. +..+++|+|+ .++.+..+|+..++++ ++||+|+
T Consensus 84 ~~~~~vLdiG~G~G--~~--------~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 153 (269)
T 1p91_A 84 DKATAVLDIGCGEG--YY--------THAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAII 153 (269)
T ss_dssp TTCCEEEEETCTTS--TT--------HHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEE
T ss_pred CCCCEEEEECCCCC--HH--------HHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEE
Confidence 57789999999999 55 5555554 2357999999 4688999999988766 7899999
Q ss_pred ecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 114 SEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 114 ~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+..+. .++..+.++|+|||++++..+.
T Consensus 154 ~~~~~----------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 154 RIYAP----------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp EESCC----------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred EeCCh----------hhHHHHHHhcCCCcEEEEEEcC
Confidence 85431 2478889999999999988754
No 176
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.07 E-value=1.9e-10 Score=98.94 Aligned_cols=88 Identities=10% Similarity=0.077 Sum_probs=67.6
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEcccccc-CC
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENV-EL 105 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~-~~ 105 (252)
..++.+|||||||+| .. +..++.. + ..+|+++|+ .++.++.+|+... +.
T Consensus 61 ~~~~~~VLdiG~G~G--~~--------~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~ 130 (248)
T 3tfw_A 61 LTQAKRILEIGTLGG--YS--------TIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLES 130 (248)
T ss_dssp HHTCSEEEEECCTTS--HH--------HHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHT
T ss_pred hcCCCEEEEecCCch--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHh
Confidence 356789999999999 55 5555553 2 368999999 3799999999764 22
Q ss_pred -C--CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 -P--EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 -~--~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
. ++||+|++... ......++..+.++|+|||+|++....
T Consensus 131 ~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 131 LGECPAFDLIFIDAD------KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp CCSCCCCSEEEECSC------GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred cCCCCCeEEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 2 48999998442 346678899999999999999987654
No 177
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.06 E-value=3e-10 Score=100.75 Aligned_cols=92 Identities=15% Similarity=0.147 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC----------------------CceEEEEccccccC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY----------------------LILEVIQNKIENVE 104 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~----------------------~~i~~~~~d~~~~~ 104 (252)
..+.+|||||||+| .+ +..+++. +..+|+++|+ .+++++.+|+..+.
T Consensus 82 ~~~~~VLdiG~G~G--~~--------~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l 151 (294)
T 3adn_A 82 GHAKHVLIIGGGDG--AM--------LREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV 151 (294)
T ss_dssp TTCCEEEEESCTTC--HH--------HHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC--
T ss_pred CCCCEEEEEeCChh--HH--------HHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHH
Confidence 45689999999999 55 5566664 3468999998 26889999988763
Q ss_pred C--CCceeEEEecccccccCChhhH--HHHHHHHhccccCCeEEEeeccc
Q psy9773 105 L--PEKVDIIVSEWMGFYLLHESMI--DSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~--~~~fDlIv~~~~~~~l~~~~~~--~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
. .++||+|+++......+. ..+ ..++..+.++|+|||+|++...+
T Consensus 152 ~~~~~~fDvIi~D~~~p~~~~-~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 152 NQTSQTFDVIISDCTDPIGPG-ESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp -CCCCCEEEEEECC-----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred hhcCCCccEEEECCCCccCcc-hhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 2 378999999654322211 112 67899999999999999998654
No 178
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.06 E-value=1.3e-10 Score=97.65 Aligned_cols=88 Identities=15% Similarity=0.052 Sum_probs=67.4
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEccccccCC-
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENVEL- 105 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~~~- 105 (252)
..++.+|||+|||+| .. +..++.. + ..+|+++|+ .++.++++|+.....
T Consensus 62 ~~~~~~vLdiG~G~G--~~--------~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 131 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTG--YS--------AIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAE 131 (225)
T ss_dssp HHTCSEEEEECCTTS--HH--------HHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred hhCCCEEEEeCCcch--HH--------HHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHH
Confidence 356789999999999 55 5565553 2 368999999 359999999966521
Q ss_pred -C-----CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 -P-----EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 -~-----~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
. ++||+|++... ......++..+.++|+|||+|++....
T Consensus 132 ~~~~~~~~~fD~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 132 LIHAGQAWQYDLIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp HHTTTCTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred hhhccCCCCccEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 1 68999987442 346778999999999999999987654
No 179
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.06 E-value=1.5e-10 Score=99.58 Aligned_cols=88 Identities=14% Similarity=0.045 Sum_probs=67.7
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEccccccCC-
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENVEL- 105 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~~~- 105 (252)
..++.+|||+|||+| .. +..+++. + ..+|+++|+ .++.++.+|+.....
T Consensus 58 ~~~~~~VLDiG~G~G--~~--------t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~ 127 (242)
T 3r3h_A 58 LTRAKKVLELGTFTG--YS--------ALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHS 127 (242)
T ss_dssp HHTCSEEEEEESCCS--HH--------HHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred hcCcCEEEEeeCCcC--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHH
Confidence 356789999999999 54 5555552 2 358999999 379999999976522
Q ss_pred ------CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 ------PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 ------~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++||+|++... ......++..+.++|+|||+|++....
T Consensus 128 ~~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 128 LLNEGGEHQFDFIFIDAD------KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp HHHHHCSSCEEEEEEESC------GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HhhccCCCCEeEEEEcCC------hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 378999998542 346778899999999999999997654
No 180
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.05 E-value=6.3e-10 Score=100.31 Aligned_cols=91 Identities=12% Similarity=0.141 Sum_probs=71.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC----------CceEEEEccccccCCCCceeEEEec
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY----------LILEVIQNKIENVELPEKVDIIVSE 115 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~----------~~i~~~~~d~~~~~~~~~fDlIv~~ 115 (252)
..++.+|||||||+| .+ +..+++. +..+++++|+ .+++++.+|+.. +.+. ||+|++.
T Consensus 186 ~~~~~~vlDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~p~-~D~v~~~ 253 (352)
T 1fp2_A 186 FDGLESIVDVGGGTG--TT--------AKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFT-SIPN-ADAVLLK 253 (352)
T ss_dssp HTTCSEEEEETCTTS--HH--------HHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTT-CCCC-CSEEEEE
T ss_pred cccCceEEEeCCCcc--HH--------HHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccC-CCCC-ccEEEee
Confidence 346689999999999 55 5555554 2347999998 468999999976 4444 9999998
Q ss_pred ccccccCChhhHHHHHHHHhccccC---CeEEEeeccc
Q psy9773 116 WMGFYLLHESMIDSVIFARDKFLKP---EGVMYPYKCI 150 (252)
Q Consensus 116 ~~~~~l~~~~~~~~~l~~l~~~Lkp---gG~lv~~~~~ 150 (252)
.++|++.. .....+|++++++|+| ||+|++....
T Consensus 254 ~~lh~~~d-~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 254 YILHNWTD-KDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp SCGGGSCH-HHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred hhhccCCH-HHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 88887732 2455999999999999 9999988764
No 181
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.05 E-value=2.5e-10 Score=102.99 Aligned_cols=92 Identities=12% Similarity=-0.009 Sum_probs=71.4
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------C--ceEEEEccccccCC---
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------L--ILEVIQNKIENVEL--- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~--~i~~~~~d~~~~~~--- 105 (252)
.++.+|||+|||+| .+ +..++..|+ +|+++|+ . ++.++++|+.++..
T Consensus 152 ~~~~~VLDlgcGtG--~~--------sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~ 220 (332)
T 2igt_A 152 DRPLKVLNLFGYTG--VA--------SLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREE 220 (332)
T ss_dssp SSCCEEEEETCTTC--HH--------HHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHH
T ss_pred CCCCcEEEcccccC--HH--------HHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHH
Confidence 46789999999999 66 777777776 8999999 1 48999999987642
Q ss_pred --CCceeEEEeccccccc-------CChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 --PEKVDIIVSEWMGFYL-------LHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 --~~~fDlIv~~~~~~~l-------~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++||+|++++..+.. ....++..++..+.++|+|||+|++....
T Consensus 221 ~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 221 RRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred hcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 3689999996642221 12346778999999999999998876644
No 182
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.05 E-value=4e-10 Score=103.45 Aligned_cols=95 Identities=15% Similarity=0.072 Sum_probs=73.2
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------C--ceEEEEccccccCC---
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------L--ILEVIQNKIENVEL--- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~--~i~~~~~d~~~~~~--- 105 (252)
.++.+|||+|||+| .+ ++.++..|+.+|+|+|+ . ++.++++|+.++..
T Consensus 211 ~~~~~VLDl~cGtG--~~--------sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~ 280 (385)
T 2b78_A 211 AAGKTVLNLFSYTA--AF--------SVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYAR 280 (385)
T ss_dssp TBTCEEEEETCTTT--HH--------HHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHH
T ss_pred cCCCeEEEEeeccC--HH--------HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHH
Confidence 57789999999999 77 77888777778999999 2 78999999977421
Q ss_pred --CCceeEEEeccccc-----ccC-ChhhHHHHHHHHhccccCCeEEEeeccccc
Q psy9773 106 --PEKVDIIVSEWMGF-----YLL-HESMIDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 106 --~~~fDlIv~~~~~~-----~l~-~~~~~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
..+||+|++++..+ ... ....+..++..+.++|+|||+|++++++..
T Consensus 281 ~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 281 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 25899999965432 111 123566788888999999999999887533
No 183
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.05 E-value=2.2e-09 Score=97.21 Aligned_cols=99 Identities=13% Similarity=0.156 Sum_probs=75.5
Q ss_pred HHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC----------------CceEEEEccccc
Q psy9773 40 AICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY----------------LILEVIQNKIEN 102 (252)
Q Consensus 40 ~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~----------------~~i~~~~~d~~~ 102 (252)
.+..........+|+|||||+| .+ +..+++..+ .+++..|. .+++++.+|+..
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G--~~--------~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~ 239 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAG--AL--------AKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFK 239 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTS--HH--------HHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTT
T ss_pred HHHHhcCcccCCeEEeeCCCCC--HH--------HHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCcccc
Confidence 3444344566689999999999 55 555555433 46777787 689999999987
Q ss_pred cCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 103 VELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 103 ~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+.+ .+|+|++..++|.++ ..+...+|+++++.|+|||++++....
T Consensus 240 ~~~~-~~D~~~~~~vlh~~~-d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 240 DPLP-EADLYILARVLHDWA-DGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp SCCC-CCSEEEEESSGGGSC-HHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CCCC-CceEEEeeeecccCC-HHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 6544 579999999887763 335788999999999999999987754
No 184
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.05 E-value=2.5e-10 Score=96.72 Aligned_cols=87 Identities=13% Similarity=0.149 Sum_probs=67.6
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC------------------CceEEEEcccccc-C-C
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY------------------LILEVIQNKIENV-E-L 105 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~------------------~~i~~~~~d~~~~-~-~ 105 (252)
..++.+|||+|||+| .+ +..+++.. ..+|+++|+ .++.++.+|+... + .
T Consensus 52 ~~~~~~vLdiG~G~G--~~--------~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 121 (233)
T 2gpy_A 52 MAAPARILEIGTAIG--YS--------AIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKL 121 (233)
T ss_dssp HHCCSEEEEECCTTS--HH--------HHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHH
T ss_pred ccCCCEEEEecCCCc--HH--------HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhc
Confidence 356789999999999 55 55555542 368999999 2589999999875 2 1
Q ss_pred --CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 --PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 --~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+++||+|++... . .+...++..+.++|+|||++++...
T Consensus 122 ~~~~~fD~I~~~~~---~---~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 122 ELYPLFDVLFIDAA---K---GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp TTSCCEEEEEEEGG---G---SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred ccCCCccEEEECCC---H---HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 368999998553 2 2577899999999999999999754
No 185
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.04 E-value=7e-10 Score=103.45 Aligned_cols=91 Identities=13% Similarity=0.050 Sum_probs=67.7
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC--------------------------CceEEEE
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY--------------------------LILEVIQ 97 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~--------------------------~~i~~~~ 97 (252)
....++.+|||||||+| .+ +..++. .++.+|+|+|+ .++.+++
T Consensus 238 l~l~~g~~VLDLGCGsG--~l--------a~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 238 CQLKKGDTFMDLGSGVG--NC--------VVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp TTCCTTCEEEEESCTTS--HH--------HHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred cCCCCCCEEEEeCCCcC--HH--------HHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 45678899999999999 55 556665 45567999997 2567777
Q ss_pred cccccc--CC---CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 98 NKIENV--EL---PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 98 ~d~~~~--~~---~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+|.... ++ .++||+|+++..+ ..+++..+|..+.+.|+|||+|++..+
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l----~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL----FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT----CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred cCccccccccccccCCCCEEEEeCcc----ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 754321 11 2689999986543 225788889999999999999998753
No 186
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.04 E-value=2.7e-10 Score=99.66 Aligned_cols=88 Identities=20% Similarity=0.184 Sum_probs=70.5
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC-----------------CceEEEEccccccCCCC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY-----------------LILEVIQNKIENVELPE 107 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~-----------------~~i~~~~~d~~~~~~~~ 107 (252)
...++.+|||+|||+| .+ +..+++.+ ..+|+|+|+ .++.++++|+.+++..+
T Consensus 116 ~~~~~~~VLDlgcG~G--~~--------s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~ 185 (272)
T 3a27_A 116 ISNENEVVVDMFAGIG--YF--------TIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKD 185 (272)
T ss_dssp SCCTTCEEEETTCTTT--TT--------HHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTT
T ss_pred hcCCCCEEEEecCcCC--HH--------HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccC
Confidence 4678899999999999 66 66777753 458999999 46889999999883346
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+||+|++++.. .+..++..+.+.|+|||++++++..
T Consensus 186 ~~D~Vi~d~p~-------~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 186 VADRVIMGYVH-------KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp CEEEEEECCCS-------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CceEEEECCcc-------cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 89999986642 4456788888999999999988765
No 187
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.04 E-value=5.5e-10 Score=94.85 Aligned_cols=87 Identities=15% Similarity=0.055 Sum_probs=69.4
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccC-C
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVE-L 105 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~-~ 105 (252)
....++.+|||+|||+| .+ +..+++. ..+++++|+ .++.++.+|+.+.. .
T Consensus 87 ~~~~~~~~vldiG~G~G--~~--------~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 155 (248)
T 2yvl_A 87 LNLNKEKRVLEFGTGSG--AL--------LAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP 155 (248)
T ss_dssp TTCCTTCEEEEECCTTS--HH--------HHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC
T ss_pred cCCCCCCEEEEeCCCcc--HH--------HHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC
Confidence 45678899999999999 66 6666666 468999998 36889999998865 3
Q ss_pred CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 ~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++||+|+++. +++..++..+.++|+|||++++..+.
T Consensus 156 ~~~~D~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 156 EGIFHAAFVDV--------REPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp TTCBSEEEECS--------SCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred CCcccEEEECC--------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 37899998732 24456788889999999999998874
No 188
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.04 E-value=6.6e-10 Score=91.79 Aligned_cols=87 Identities=16% Similarity=0.073 Sum_probs=62.6
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCCCCceeEEE
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVELPEKVDIIV 113 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~~~~fDlIv 113 (252)
...++.+|||+|||+| .+ +..++..+..+|+|+|+ .++.++++|+..++ ++||+|+
T Consensus 48 ~~~~~~~vlD~gcG~G--~~--------~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~--~~~D~v~ 115 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNG--IL--------ACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS--GKYDTWI 115 (200)
T ss_dssp TSSBTSEEEEETCTTC--HH--------HHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC--CCEEEEE
T ss_pred CCCCCCEEEEEeCCcc--HH--------HHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC--CCeeEEE
Confidence 3457789999999999 66 66777666667999999 26899999999875 7899999
Q ss_pred ecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 114 SEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 114 ~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+++..++.... ....++..+.+.| |+ +++..
T Consensus 116 ~~~p~~~~~~~-~~~~~l~~~~~~~--g~-~~~~~ 146 (200)
T 1ne2_A 116 MNPPFGSVVKH-SDRAFIDKAFETS--MW-IYSIG 146 (200)
T ss_dssp ECCCC--------CHHHHHHHHHHE--EE-EEEEE
T ss_pred ECCCchhccCc-hhHHHHHHHHHhc--Cc-EEEEE
Confidence 98876665432 2346788888887 44 44433
No 189
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.04 E-value=3.9e-10 Score=96.33 Aligned_cols=88 Identities=22% Similarity=0.172 Sum_probs=70.3
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEccccccC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENVE 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~~ 104 (252)
....++.+|||+|||+| .+ +..+++. + ..+++++|+ .++.++++|+.+.+
T Consensus 92 ~~~~~~~~vLdiG~G~G--~~--------~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 92 LDLAPGMRVLEAGTGSG--GL--------TLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp TTCCTTCEEEEECCTTS--HH--------HHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred cCCCCCCEEEEECCCcC--HH--------HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 45778899999999999 65 5566664 4 368999998 15889999999886
Q ss_pred CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++ ++||+|+++. +++..++..+.++|+|||++++..+.
T Consensus 162 ~~~~~~D~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 162 LEEAAYDGVALDL--------MEPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp CCTTCEEEEEEES--------SCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred CCCCCcCEEEECC--------cCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 65 7899998832 24457889999999999999998765
No 190
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.04 E-value=4.4e-10 Score=96.35 Aligned_cols=93 Identities=10% Similarity=0.071 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC-----------------------CceEEEEccccc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY-----------------------LILEVIQNKIEN 102 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~-----------------------~~i~~~~~d~~~ 102 (252)
...+.+|||||||+| .+ +..++... ...++|+|+ .++.++++|+..
T Consensus 44 ~~~~~~vLDiGcG~G--~~--------~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~ 113 (235)
T 3ckk_A 44 AQAQVEFADIGCGYG--GL--------LVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMK 113 (235)
T ss_dssp --CCEEEEEETCTTC--HH--------HHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTT
T ss_pred cCCCCeEEEEccCCc--HH--------HHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHH
Confidence 356679999999999 55 55555543 357999999 258899999987
Q ss_pred -cC--CC-CceeEEEecccccccC--Chh---hHHHHHHHHhccccCCeEEEeecc
Q psy9773 103 -VE--LP-EKVDIIVSEWMGFYLL--HES---MIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 103 -~~--~~-~~fDlIv~~~~~~~l~--~~~---~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++ ++ ++||.|++.....+.. |.. ....+|..+.++|+|||+|++.+.
T Consensus 114 ~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 114 HLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp CHHHHCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred hhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 54 44 8899998743211110 000 114789999999999999998764
No 191
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.04 E-value=9.1e-10 Score=97.62 Aligned_cols=108 Identities=11% Similarity=-0.004 Sum_probs=72.5
Q ss_pred HHHHHHHHH-hCCCCCCCCEEEEEcCCcCchh--hhhccCccchHHHh-hcC-CCcEEEeeC----CceEE-EEcccccc
Q psy9773 34 NEAYRAAIC-DNPNIFAGKTVLDVGTGTGKSI--LLQGHGVDHHSFCT-KVH-PLDHYAPQY----LILEV-IQNKIENV 103 (252)
Q Consensus 34 ~~~~~~~l~-~~~~~~~~~~VLDlGcGtG~~~--ll~~~~v~~s~~~a-~~g-~~~v~gvD~----~~i~~-~~~d~~~~ 103 (252)
+..+...+. ......++.+|||+|||+|... - +..++ ..+ ..+|+|+|+ .++.+ +++|+.++
T Consensus 47 y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpG--------s~~~a~~~~~~~~V~gvDis~~v~~v~~~i~gD~~~~ 118 (290)
T 2xyq_A 47 YTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPG--------TAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATV 118 (290)
T ss_dssp HHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHH--------HHHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGC
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcH--------HHHHHHHcCCCCEEEEEECCCCCCCCEEEEECccccC
Confidence 333444442 2345678899999999663111 1 21222 333 257999999 46889 99999988
Q ss_pred CCCCceeEEEecccccc--------cCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 ELPEKVDIIVSEWMGFY--------LLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 ~~~~~fDlIv~~~~~~~--------l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+++++||+|+++...+. ......+..++..+.++|+|||+|++...
T Consensus 119 ~~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 119 HTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp CCSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 77788999999653221 01122356889999999999999998653
No 192
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.03 E-value=8.4e-10 Score=94.71 Aligned_cols=89 Identities=17% Similarity=0.063 Sum_probs=72.3
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC------------------CceEEEEccccccCCC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY------------------LILEVIQNKIENVELP 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~------------------~~i~~~~~d~~~~~~~ 106 (252)
...++.+|||+|||+| .+ +..++..+. .+|+|+|+ .++.+.++|..+...+
T Consensus 18 ~v~~g~~VlDIGtGsG--~l--------~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~ 87 (230)
T 3lec_A 18 YVPKGARLLDVGSDHA--YL--------PIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE 87 (230)
T ss_dssp TSCTTEEEEEETCSTT--HH--------HHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred hCCCCCEEEEECCchH--HH--------HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc
Confidence 4567899999999999 77 778888763 57999999 4699999999888766
Q ss_pred C-ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 107 E-KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~-~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+ +||+|+...++. .-+..++....+.|+++|+|+++..
T Consensus 88 ~~~~D~IviaGmGg-----~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 88 ADNIDTITICGMGG-----RLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp GGCCCEEEEEEECH-----HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ccccCEEEEeCCch-----HHHHHHHHHHHHHhCcCCEEEEECC
Confidence 4 799988645422 2477889999999999999998864
No 193
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.02 E-value=1.2e-09 Score=91.80 Aligned_cols=86 Identities=19% Similarity=0.100 Sum_probs=65.4
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CC-CcEEEeeC-------------C---------ceEEEEcccc
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HP-LDHYAPQY-------------L---------ILEVIQNKIE 101 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~-~~v~gvD~-------------~---------~i~~~~~d~~ 101 (252)
...++.+|||+|||+| .+ +..++.. ++ .+|+++|+ . ++.++++|+.
T Consensus 74 ~~~~~~~vLDiG~G~G--~~--------~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 143 (226)
T 1i1n_A 74 QLHEGAKALDVGSGSG--IL--------TACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR 143 (226)
T ss_dssp TSCTTCEEEEETCTTS--HH--------HHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG
T ss_pred hCCCCCEEEEEcCCcC--HH--------HHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcc
Confidence 3567899999999999 55 5555553 33 48999999 1 6889999998
Q ss_pred ccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 102 NVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 102 ~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
..... ++||+|++......+ +..+.++|+|||+|++..++
T Consensus 144 ~~~~~~~~fD~i~~~~~~~~~---------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 144 MGYAEEAPYDAIHVGAAAPVV---------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GCCGGGCCEEEEEECSBBSSC---------CHHHHHTEEEEEEEEEEESC
T ss_pred cCcccCCCcCEEEECCchHHH---------HHHHHHhcCCCcEEEEEEec
Confidence 66443 789999986654332 35678999999999998754
No 194
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.02 E-value=9.2e-10 Score=97.83 Aligned_cols=92 Identities=13% Similarity=-0.004 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC---------------------CceEEEEccccccCC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY---------------------LILEVIQNKIENVEL 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~---------------------~~i~~~~~d~~~~~~ 105 (252)
.++.+|||||||+| .+ +..+++. +..+|+++|+ .+++++.+|+..+..
T Consensus 94 ~~~~~VLdiG~G~G--~~--------~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 163 (304)
T 3bwc_A 94 PKPERVLIIGGGDG--GV--------LREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVR 163 (304)
T ss_dssp SSCCEEEEEECTTS--HH--------HHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH
T ss_pred CCCCeEEEEcCCCC--HH--------HHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHH
Confidence 56789999999999 55 5566654 3468999999 258899999987743
Q ss_pred ---CCceeEEEecccccccCChhhH--HHHHHHHhccccCCeEEEeeccc
Q psy9773 106 ---PEKVDIIVSEWMGFYLLHESMI--DSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 ---~~~fDlIv~~~~~~~l~~~~~~--~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+++||+|+++......+ ...+ ..++..+.++|+|||+|++...+
T Consensus 164 ~~~~~~fDvIi~d~~~~~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 164 QTPDNTYDVVIIDTTDPAGP-ASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp SSCTTCEEEEEEECC----------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hccCCceeEEEECCCCcccc-chhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 47899999965433221 1112 57899999999999999997654
No 195
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.02 E-value=5e-10 Score=97.54 Aligned_cols=88 Identities=15% Similarity=0.081 Sum_probs=69.5
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEccccccC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENVE 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~~ 104 (252)
....++.+|||+|||+| .+ +..+++. + ..+++++|+ .++.++.+|+.+..
T Consensus 108 ~~~~~~~~VLDiG~G~G--~~--------~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 177 (277)
T 1o54_A 108 LDVKEGDRIIDTGVGSG--AM--------CAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF 177 (277)
T ss_dssp TTCCTTCEEEEECCTTS--HH--------HHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC
T ss_pred hCCCCCCEEEEECCcCC--HH--------HHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc
Confidence 45678899999999999 65 5666665 4 368999998 26889999998873
Q ss_pred CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
..++||+|+++. +++..++..+.++|+|||+|++..+.
T Consensus 178 ~~~~~D~V~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 178 DEKDVDALFLDV--------PDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp SCCSEEEEEECC--------SCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred cCCccCEEEECC--------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 337899998843 24457888899999999999998764
No 196
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.01 E-value=1.1e-09 Score=93.68 Aligned_cols=89 Identities=16% Similarity=0.022 Sum_probs=70.0
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC------------------CceEEEEccccccCCC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY------------------LILEVIQNKIENVELP 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~------------------~~i~~~~~d~~~~~~~ 106 (252)
...++.+|||+|||+| .+ +..++..++ .+|+|+|+ .++++..+|..+.-.+
T Consensus 12 ~v~~g~~VlDIGtGsG--~l--------~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~ 81 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHA--YL--------PIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE 81 (225)
T ss_dssp TSCTTEEEEEETCSTT--HH--------HHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred hCCCCCEEEEeCCCcH--HH--------HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc
Confidence 4567889999999999 77 778888763 57999999 4699999998654333
Q ss_pred C-ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 107 E-KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~-~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+ +||+|+...++. ..+..++......|+|+|+|+++..
T Consensus 82 ~~~~D~IviaG~Gg-----~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 82 TDQVSVITIAGMGG-----RLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp GGCCCEEEEEEECH-----HHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred CcCCCEEEEcCCCh-----HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 3 699998744422 2477899999999999999998754
No 197
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.01 E-value=6.6e-10 Score=99.23 Aligned_cols=97 Identities=16% Similarity=0.144 Sum_probs=70.1
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc--CCCcEEEeeC-----------------CceEEEEccccccCC-
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV--HPLDHYAPQY-----------------LILEVIQNKIENVEL- 105 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~--g~~~v~gvD~-----------------~~i~~~~~d~~~~~~- 105 (252)
...++.+|||+|||+| .. +..++.. +..+|+|+|+ .++.++++|+..++.
T Consensus 115 ~~~~g~~VLDlg~G~G--~~--------t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~ 184 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPG--GK--------TSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGEL 184 (315)
T ss_dssp CCCTTCEEEECCSSCS--HH--------HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGG
T ss_pred CCCCCCEEEEeCCCCC--HH--------HHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccc
Confidence 4577899999999999 44 4455543 2257999999 378999999988754
Q ss_pred CCceeEEEecccc---cccCChhh----------------HHHHHHHHhccccCCeEEEeeccccc
Q psy9773 106 PEKVDIIVSEWMG---FYLLHESM----------------IDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 106 ~~~fDlIv~~~~~---~~l~~~~~----------------~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
+++||+|+++... ..+...++ ...+|..+.++|+|||+|++++++..
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 4789999985321 11211111 25889999999999999999887644
No 198
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.01 E-value=5e-10 Score=97.90 Aligned_cols=98 Identities=14% Similarity=0.019 Sum_probs=71.6
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhh--cCCCcEEEeeC-----------------CceEEEEccccccCC-
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK--VHPLDHYAPQY-----------------LILEVIQNKIENVEL- 105 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~--~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~- 105 (252)
...++.+|||+|||+| .. +..++. .+..+|+|+|+ .++.++++|+..++.
T Consensus 80 ~~~~g~~VLDlgaG~G--~~--------t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~ 149 (274)
T 3ajd_A 80 NPREDDFILDMCAAPG--GK--------TTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDY 149 (274)
T ss_dssp CCCTTCEEEETTCTTC--HH--------HHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH
T ss_pred CCCCcCEEEEeCCCcc--HH--------HHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchh
Confidence 3567899999999999 44 444444 33368999999 378999999988754
Q ss_pred ----CCceeEEEecccccc---cC------------ChhhHHHHHHHHhccccCCeEEEeecccccc
Q psy9773 106 ----PEKVDIIVSEWMGFY---LL------------HESMIDSVIFARDKFLKPEGVMYPYKCILHS 153 (252)
Q Consensus 106 ----~~~fDlIv~~~~~~~---l~------------~~~~~~~~l~~l~~~LkpgG~lv~~~~~~~~ 153 (252)
.++||+|+++..... +. .......++..+.++|+|||+|++++++...
T Consensus 150 ~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~ 216 (274)
T 3ajd_A 150 LLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEV 216 (274)
T ss_dssp HHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCT
T ss_pred hhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCCh
Confidence 478999998532111 10 0124578899999999999999998877543
No 199
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.01 E-value=5.1e-10 Score=97.09 Aligned_cols=88 Identities=24% Similarity=0.308 Sum_probs=69.6
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC--------------C------ceEEEEccccc
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY--------------L------ILEVIQNKIEN 102 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~--------------~------~i~~~~~d~~~ 102 (252)
....++.+|||+|||+| .+ +..++.. + ..+++++|+ . ++.++++|+..
T Consensus 95 ~~~~~~~~vLdiG~G~G--~~--------~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 95 GDIFPGARVLEAGAGSG--AL--------TLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp TTCCTTCEEEEECCTTS--HH--------HHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred cCCCCCCEEEEEccccc--HH--------HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 45778899999999999 55 5566553 3 368999998 1 47899999988
Q ss_pred cCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 103 VELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 103 ~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+++ ++||+|+++. +++..++..+.++|+|||++++..+.
T Consensus 165 ~~~~~~~~D~v~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 165 SELPDGSVDRAVLDM--------LAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CCCCTTCEEEEEEES--------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred cCCCCCceeEEEECC--------cCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 8765 7899998832 23457889999999999999998764
No 200
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.00 E-value=4.6e-10 Score=95.56 Aligned_cols=89 Identities=12% Similarity=-0.055 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC---------------------CceEEEEccccccCC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY---------------------LILEVIQNKIENVEL 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~---------------------~~i~~~~~d~~~~~~ 105 (252)
.++.+|||||||+| .+ +..++. .+..+|+|+|+ .++.++++|+..++.
T Consensus 23 ~~~~~vLDiGCG~G--~~--------~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~ 92 (225)
T 3p2e_A 23 QFDRVHIDLGTGDG--RN--------IYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF 92 (225)
T ss_dssp TCSEEEEEETCTTS--HH--------HHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCG
T ss_pred CCCCEEEEEeccCc--HH--------HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhh
Confidence 57789999999999 55 445553 22246888888 257899999988853
Q ss_pred C--CceeEEEeccccccc--CChhhHHHHHHHHhccccCCeEEEe
Q psy9773 106 P--EKVDIIVSEWMGFYL--LHESMIDSVIFARDKFLKPEGVMYP 146 (252)
Q Consensus 106 ~--~~fDlIv~~~~~~~l--~~~~~~~~~l~~l~~~LkpgG~lv~ 146 (252)
. ..+|.|++++..... ....+...+|..++++|||||+|++
T Consensus 93 ~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 93 ELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp GGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred hccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 2 445555553321111 0001235689999999999999998
No 201
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.00 E-value=1.6e-09 Score=91.11 Aligned_cols=86 Identities=17% Similarity=0.072 Sum_probs=66.0
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC------CcEEEeeC---------------C-------ceEEEE
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP------LDHYAPQY---------------L-------ILEVIQ 97 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~------~~v~gvD~---------------~-------~i~~~~ 97 (252)
...++.+|||+|||+| .+ +..++.... .+|+++|+ . ++.++.
T Consensus 77 ~~~~~~~VLdiG~G~G--~~--------~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 146 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSG--YL--------TVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIH 146 (227)
T ss_dssp TSCTTCEEEEESCTTS--HH--------HHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEE
T ss_pred hCCCCCEEEEECCCCC--HH--------HHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEE
Confidence 4677899999999999 55 556665432 48999999 2 589999
Q ss_pred ccccccC----CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 98 NKIENVE----LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 98 ~d~~~~~----~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+|+.... .. ++||+|++....+++ +..+.++|+|||++++..+.
T Consensus 147 ~d~~~~~~~~~~~~~~fD~I~~~~~~~~~---------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 147 KNIYQVNEEEKKELGLFDAIHVGASASEL---------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCGGGCCHHHHHHHCCEEEEEECSBBSSC---------CHHHHHHEEEEEEEEEEEEE
T ss_pred CChHhcccccCccCCCcCEEEECCchHHH---------HHHHHHhcCCCcEEEEEEcc
Confidence 9998764 33 789999997654432 36678999999999988753
No 202
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.00 E-value=5.7e-10 Score=102.51 Aligned_cols=95 Identities=17% Similarity=0.124 Sum_probs=73.8
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------C---ceEEEEccccccCC---
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------L---ILEVIQNKIENVEL--- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~---~i~~~~~d~~~~~~--- 105 (252)
.++.+|||+|||+| .+ +..++..|+.+|+|+|+ . ++.++++|+.++..
T Consensus 219 ~~~~~VLDl~cG~G--~~--------sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~ 288 (396)
T 3c0k_A 219 VENKRVLNCFSYTG--GF--------AVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYR 288 (396)
T ss_dssp CTTCEEEEESCTTC--SH--------HHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHH
T ss_pred hCCCeEEEeeccCC--HH--------HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHH
Confidence 47789999999999 66 77777777778999999 2 57899999987632
Q ss_pred --CCceeEEEecccccc------cCChhhHHHHHHHHhccccCCeEEEeeccccc
Q psy9773 106 --PEKVDIIVSEWMGFY------LLHESMIDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 106 --~~~fDlIv~~~~~~~------l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
..+||+|++++..+. ......+..++..+.++|+|||++++++++..
T Consensus 289 ~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 289 DRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp HTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred hcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 358999999653211 11224677889999999999999999886633
No 203
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.99 E-value=4.9e-10 Score=98.79 Aligned_cols=85 Identities=12% Similarity=-0.029 Sum_probs=69.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCCCCc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVELPEK 108 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~~~~ 108 (252)
..+|.+|||+|||+| .+ ++.+++.|+.+|+|+|+ .++.++++|...+...+.
T Consensus 123 ~~~g~~VlD~~aG~G--~~--------~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~ 192 (278)
T 3k6r_A 123 AKPDELVVDMFAGIG--HL--------SLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENI 192 (278)
T ss_dssp CCTTCEEEETTCTTT--TT--------THHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSC
T ss_pred cCCCCEEEEecCcCc--HH--------HHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccC
Confidence 578999999999999 77 88888888778999999 578999999999877789
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
||.|+++.... ...++..+.++|+|||++.+..
T Consensus 193 ~D~Vi~~~p~~-------~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 193 ADRILMGYVVR-------THEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp EEEEEECCCSS-------GGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEECCCCc-------HHHHHHHHHHHcCCCCEEEEEe
Confidence 99998854311 1245666778999999987654
No 204
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.99 E-value=1.5e-09 Score=93.99 Aligned_cols=89 Identities=18% Similarity=0.129 Sum_probs=72.0
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC------------------CceEEEEccccccCCC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY------------------LILEVIQNKIENVELP 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~------------------~~i~~~~~d~~~~~~~ 106 (252)
...++.+|||||||+| .+ +..++..+. .+|+|+|+ .++.+.++|..+...+
T Consensus 18 ~v~~g~~VlDIGtGsG--~l--------~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~ 87 (244)
T 3gnl_A 18 YITKNERIADIGSDHA--YL--------PCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK 87 (244)
T ss_dssp TCCSSEEEEEETCSTT--HH--------HHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred hCCCCCEEEEECCccH--HH--------HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc
Confidence 4577899999999999 77 778888763 57999999 4699999999887665
Q ss_pred C-ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 107 E-KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~-~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+ +||+|++..++. .-+..+|....+.|+++|+|+++..
T Consensus 88 ~~~~D~IviagmGg-----~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 88 KDAIDTIVIAGMGG-----TLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp GGCCCEEEEEEECH-----HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred cccccEEEEeCCch-----HHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 4 599998744422 3477889999999999999998864
No 205
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.98 E-value=3.6e-09 Score=97.01 Aligned_cols=96 Identities=16% Similarity=0.056 Sum_probs=70.1
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc--CCCcEEEeeC--------CceEEEEccccccCCCCceeEEEecc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV--HPLDHYAPQY--------LILEVIQNKIENVELPEKVDIIVSEW 116 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~--g~~~v~gvD~--------~~i~~~~~d~~~~~~~~~fDlIv~~~ 116 (252)
..++.+|||+|||+| .+ +..+++. +..+++|+|+ .++.++++|+..+...++||+|++++
T Consensus 37 ~~~~~~vLD~gcGtG--~~--------~~~~~~~~~~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~~~~~fD~Ii~NP 106 (421)
T 2ih2_A 37 APRGGRVLEPACAHG--PF--------LRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWEPGEAFDLILGNP 106 (421)
T ss_dssp CCTTCEEEEETCTTC--HH--------HHHHHHHHCSCSEEEEEESCTTTCCCCTTEEEEESCGGGCCCSSCEEEEEECC
T ss_pred cCCCCEEEECCCCCh--HH--------HHHHHHHhCCCCeEEEEECCHHHHHhCCCCcEEeCChhhcCccCCCCEEEECc
Confidence 345679999999999 55 4455543 3368999999 46899999999876557899999965
Q ss_pred cccccCC---------hh-----------------hHHHHHHHHhccccCCeEEEeeccccc
Q psy9773 117 MGFYLLH---------ES-----------------MIDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 117 ~~~~l~~---------~~-----------------~~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
-...... .. ....++..+.++|+|||++++..+..+
T Consensus 107 Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~ 168 (421)
T 2ih2_A 107 PYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATW 168 (421)
T ss_dssp CCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGG
T ss_pred CccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHH
Confidence 4322211 11 122668889999999999999887643
No 206
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.98 E-value=9.4e-10 Score=98.56 Aligned_cols=87 Identities=21% Similarity=0.241 Sum_probs=65.4
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CC-CcEEEeeC------------C----------------ceEE
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HP-LDHYAPQY------------L----------------ILEV 95 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~-~~v~gvD~------------~----------------~i~~ 95 (252)
...++.+|||+|||+| .+ +..+++. |+ .+|+++|+ . ++.+
T Consensus 102 ~~~~g~~VLDiG~G~G--~~--------~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~ 171 (336)
T 2b25_A 102 DINPGDTVLEAGSGSG--GM--------SLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDF 171 (336)
T ss_dssp TCCTTCEEEEECCTTS--HH--------HHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEE
T ss_pred CCCCCCEEEEeCCCcC--HH--------HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEE
Confidence 4678899999999999 66 6666664 55 68999999 1 5889
Q ss_pred EEccccccC--CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 96 IQNKIENVE--LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 96 ~~~d~~~~~--~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+.+|+.+.. ++ ++||+|+++.. .+..++..+.++|+|||+|++..+.
T Consensus 172 ~~~d~~~~~~~~~~~~fD~V~~~~~--------~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 172 IHKDISGATEDIKSLTFDAVALDML--------NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp EESCTTCCC-------EEEEEECSS--------STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred EECChHHcccccCCCCeeEEEECCC--------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999998873 33 68999998542 1223788899999999999987654
No 207
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.97 E-value=1.7e-09 Score=97.63 Aligned_cols=90 Identities=14% Similarity=0.222 Sum_probs=70.6
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC----------CceEEEEccccccCCCCceeEEEecc
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY----------LILEVIQNKIENVELPEKVDIIVSEW 116 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~----------~~i~~~~~d~~~~~~~~~fDlIv~~~ 116 (252)
..+.+|||||||+| .+ +..+++..+ .+++++|+ .+++++.+|+.. +.+ .||+|++..
T Consensus 192 ~~~~~vlDvG~G~G--~~--------~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~-~~D~v~~~~ 259 (358)
T 1zg3_A 192 EGLESLVDVGGGTG--GV--------TKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFK-SIP-SADAVLLKW 259 (358)
T ss_dssp HTCSEEEEETCTTS--HH--------HHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTT-CCC-CCSEEEEES
T ss_pred cCCCEEEEECCCcC--HH--------HHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCC-CCC-CceEEEEcc
Confidence 45689999999999 55 555555433 47888898 468999999987 555 599999988
Q ss_pred cccccCChhhHHHHHHHHhccccC---CeEEEeeccc
Q psy9773 117 MGFYLLHESMIDSVIFARDKFLKP---EGVMYPYKCI 150 (252)
Q Consensus 117 ~~~~l~~~~~~~~~l~~l~~~Lkp---gG~lv~~~~~ 150 (252)
++|++.. .....+|++++++|+| ||+|++....
T Consensus 260 vlh~~~d-~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 260 VLHDWND-EQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp CGGGSCH-HHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred cccCCCH-HHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 8777632 2355999999999999 9999987654
No 208
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.97 E-value=9.8e-10 Score=91.53 Aligned_cols=85 Identities=11% Similarity=0.046 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEcccccc-CC-
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENV-EL- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~-~~- 105 (252)
.++.+|||+|||+| .. +..++.. + ..+|+++|+ .+++++++|+... +.
T Consensus 55 ~~~~~vLdiG~G~G--~~--------~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 124 (210)
T 3c3p_A 55 KQPQLVVVPGDGLG--CA--------SWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ 124 (210)
T ss_dssp HCCSEEEEESCGGG--HH--------HHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC
T ss_pred hCCCEEEEEcCCcc--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC
Confidence 45689999999999 54 5555553 2 358999999 3689999999765 32
Q ss_pred CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++ ||+|++... ......++..+.++|+|||+|++...
T Consensus 125 ~~-fD~v~~~~~------~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 125 RD-IDILFMDCD------VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp CS-EEEEEEETT------TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred CC-CCEEEEcCC------hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 36 999998531 24577899999999999999998654
No 209
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.97 E-value=8.6e-10 Score=101.27 Aligned_cols=95 Identities=23% Similarity=0.153 Sum_probs=73.7
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------C-ceEEEEccccccCC----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------L-ILEVIQNKIENVEL---- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~-~i~~~~~d~~~~~~---- 105 (252)
.++.+|||+|||+| .+ +..++..|+.+|+|+|+ . ++.++++|+.++..
T Consensus 216 ~~~~~VLDl~~G~G--~~--------~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~ 285 (396)
T 2as0_A 216 QPGDRVLDVFTYTG--GF--------AIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQK 285 (396)
T ss_dssp CTTCEEEETTCTTT--HH--------HHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred hCCCeEEEecCCCC--HH--------HHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHh
Confidence 47889999999999 77 77777777778999999 1 78999999987632
Q ss_pred -CCceeEEEecccccccC------ChhhHHHHHHHHhccccCCeEEEeeccccc
Q psy9773 106 -PEKVDIIVSEWMGFYLL------HESMIDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 106 -~~~fDlIv~~~~~~~l~------~~~~~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
..+||+|++++..+... .......++..+.++|+|||+|++.+++..
T Consensus 286 ~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 286 KGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp TTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred hCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 36899999965422111 113567888999999999999998876533
No 210
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.97 E-value=5.3e-10 Score=95.21 Aligned_cols=87 Identities=15% Similarity=0.104 Sum_probs=66.3
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEcccccc-C-
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENV-E- 104 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~-~- 104 (252)
..++.+|||+|||+| .. +..+++. + ..+|+++|+ .++.++.+|+... +
T Consensus 58 ~~~~~~VLdiG~G~G--~~--------~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 127 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTG--YS--------SLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQV 127 (239)
T ss_dssp HHTCSEEEEECCTTC--HH--------HHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHH
T ss_pred hhCcCEEEEEeCCCC--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHH
Confidence 356789999999999 55 5555554 2 358999999 2489999998653 1
Q ss_pred C---------------C-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 L---------------P-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ~---------------~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
. . ++||+|++... ...+..++..+.++|+|||+|++...
T Consensus 128 ~~~~~~~~~~~~~f~~~~~~fD~I~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 128 LIDSKSAPSWASDFAFGPSSIDLFFLDAD------KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHCSSCCGGGTTTCCSTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHhhcccccccccccCCCCCcCEEEEeCC------HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 1 2 67999998532 24567889999999999999999764
No 211
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.96 E-value=7e-10 Score=97.76 Aligned_cols=91 Identities=19% Similarity=0.055 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCCCCce-
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVELPEKV- 109 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~~~~f- 109 (252)
++.+|||+|||+| .+ +..++..+..+|+|+|+ .++.++++|+.... +++|
T Consensus 123 ~~~~vLDlG~GsG--~~--------~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-~~~f~ 191 (284)
T 1nv8_A 123 GIKTVADIGTGSG--AI--------GVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-KEKFA 191 (284)
T ss_dssp TCCEEEEESCTTS--HH--------HHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG-GGGTT
T ss_pred CCCEEEEEeCchh--HH--------HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc-ccccC
Confidence 5679999999999 55 55555543468999999 24999999998742 3578
Q ss_pred --eEEEecccccc--------cCChh--------hHHHHHHHHh-ccccCCeEEEeeccc
Q psy9773 110 --DIIVSEWMGFY--------LLHES--------MIDSVIFARD-KFLKPEGVMYPYKCI 150 (252)
Q Consensus 110 --DlIv~~~~~~~--------l~~~~--------~~~~~l~~l~-~~LkpgG~lv~~~~~ 150 (252)
|+|++++-... +.+.+ +...++..+. +.|+|||+|++..+.
T Consensus 192 ~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 192 SIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp TCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred CCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 99999632110 00221 1236889999 999999999997653
No 212
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.96 E-value=2.2e-09 Score=94.38 Aligned_cols=92 Identities=10% Similarity=0.030 Sum_probs=67.8
Q ss_pred CCEEEEEcCCcC--chhhhhccCccchHHHhh-cCCCcEEEeeC-----------------CceEEEEccccccCC----
Q psy9773 50 GKTVLDVGTGTG--KSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------------LILEVIQNKIENVEL---- 105 (252)
Q Consensus 50 ~~~VLDlGcGtG--~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~---- 105 (252)
..+|||||||+| +++. ..+.+ .+..+|+++|. .++.|+++|+.++..
T Consensus 79 ~~q~LDLGcG~pT~~~~~---------~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~ 149 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLH---------EIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDA 149 (277)
T ss_dssp CCEEEEESCCSCCSSCHH---------HHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTC
T ss_pred CCEEEEeCCCCCcccHHH---------HHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcc
Confidence 378999999973 2222 22222 23357999999 258999999988621
Q ss_pred ---CCcee-----EEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 ---PEKVD-----IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 ---~~~fD-----lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+.|| .|+++.++|++....++..+|..+.+.|+|||+|+++...
T Consensus 150 ~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 150 PELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp HHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred cccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 13454 5778888899876656889999999999999999998754
No 213
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.94 E-value=8e-10 Score=108.87 Aligned_cols=93 Identities=14% Similarity=0.023 Sum_probs=74.2
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------C--ceEEEEccccccC-C-C
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------L--ILEVIQNKIENVE-L-P 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~--~i~~~~~d~~~~~-~-~ 106 (252)
.+|.+|||+||||| .+ ++.++..|+.+|+++|+ . ++.++++|+.++. . .
T Consensus 538 ~~g~~VLDlg~GtG--~~--------sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~ 607 (703)
T 3v97_A 538 SKGKDFLNLFSYTG--SA--------TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN 607 (703)
T ss_dssp CTTCEEEEESCTTC--HH--------HHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCC
T ss_pred cCCCcEEEeeechh--HH--------HHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcC
Confidence 46889999999999 77 77878788778999999 2 6899999998852 2 3
Q ss_pred CceeEEEecccccc--------cCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 EKVDIIVSEWMGFY--------LLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ~~fDlIv~~~~~~~--------l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|++++-.+. +....+...++..+.++|+|||+|+++++.
T Consensus 608 ~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 608 EQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 78999999664321 122346788899999999999999988765
No 214
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.94 E-value=1.9e-09 Score=90.92 Aligned_cols=86 Identities=15% Similarity=0.077 Sum_probs=64.6
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCC------CcEEEeeC---------------C-------ceEEE
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHP------LDHYAPQY---------------L-------ILEVI 96 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~------~~v~gvD~---------------~-------~i~~~ 96 (252)
...++.+|||+|||+| .+ +..++. .+. .+|+++|+ . ++.++
T Consensus 81 ~~~~~~~VLdiG~G~G--~~--------~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 81 HLKPGARILDVGSGSG--YL--------TACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp TCCTTCEEEEESCTTS--HH--------HHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred hCCCCCEEEEECCCcc--HH--------HHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 4677899999999999 55 555554 332 47999998 1 58899
Q ss_pred EccccccCCC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 97 QNKIENVELP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 97 ~~d~~~~~~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+|+...... ++||+|++....+++ +..+.++|+|||+|++....
T Consensus 151 ~~d~~~~~~~~~~fD~I~~~~~~~~~---------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 151 EGDGRKGYPPNAPYNAIHVGAAAPDT---------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ESCGGGCCGGGCSEEEEEECSCBSSC---------CHHHHHTEEEEEEEEEEESC
T ss_pred ECCcccCCCcCCCccEEEECCchHHH---------HHHHHHHhcCCCEEEEEEec
Confidence 9999873223 789999997765443 25678999999999998753
No 215
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.94 E-value=1.1e-09 Score=96.94 Aligned_cols=93 Identities=16% Similarity=0.028 Sum_probs=65.9
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC---------------------CceEEEEcccccc-C
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY---------------------LILEVIQNKIENV-E 104 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~---------------------~~i~~~~~d~~~~-~ 104 (252)
..+.+|||||||+| .+ +..+++. +..+|+++|+ .+++++.+|+... +
T Consensus 89 ~~~~~VLdiG~G~G--~~--------~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~ 158 (296)
T 1inl_A 89 PNPKKVLIIGGGDG--GT--------LREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR 158 (296)
T ss_dssp SSCCEEEEEECTTC--HH--------HHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG
T ss_pred CCCCEEEEEcCCcC--HH--------HHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh
Confidence 35589999999999 65 5666665 4568999999 2588999998764 2
Q ss_pred C-CCceeEEEecccccccCChh--hHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 L-PEKVDIIVSEWMGFYLLHES--MIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~-~~~fDlIv~~~~~~~l~~~~--~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
. +++||+|+++.......... ....++..+.++|+|||+|++...+
T Consensus 159 ~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 159 KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred hCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 2 37899999854322011001 2267899999999999999998654
No 216
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.93 E-value=8.4e-10 Score=95.16 Aligned_cols=86 Identities=13% Similarity=0.018 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEcccccc-C-C
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENV-E-L 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~-~-~ 105 (252)
.++.+|||+|||+| .. +..+++. + ..+++++|+ .+++++.+|+... + .
T Consensus 78 ~~~~~VLeiG~G~G--~~--------~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l 147 (247)
T 1sui_A 78 INAKNTMEIGVYTG--YS--------LLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEM 147 (247)
T ss_dssp TTCCEEEEECCGGG--HH--------HHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred hCcCEEEEeCCCcC--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHH
Confidence 46689999999999 44 4455543 2 258999999 3689999998764 2 1
Q ss_pred ------CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 ------PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ------~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.++||+|++... ......++..+.++|+|||+|++...
T Consensus 148 ~~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 148 IKDEKNHGSYDFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp HHSGGGTTCBSEEEECSC------STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred HhccCCCCCEEEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 468999998542 23567889999999999999998764
No 217
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.93 E-value=1.4e-09 Score=95.41 Aligned_cols=93 Identities=15% Similarity=-0.015 Sum_probs=68.6
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC---------------------CceEEEEcccccc-C
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY---------------------LILEVIQNKIENV-E 104 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~---------------------~~i~~~~~d~~~~-~ 104 (252)
..+.+|||||||+| .+ +..+++. +..+|+++|+ .+++++.+|+... .
T Consensus 74 ~~~~~VLdiG~G~G--~~--------~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~ 143 (275)
T 1iy9_A 74 PNPEHVLVVGGGDG--GV--------IREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA 143 (275)
T ss_dssp SSCCEEEEESCTTC--HH--------HHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH
T ss_pred CCCCEEEEECCchH--HH--------HHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh
Confidence 35689999999999 66 6666665 5578999999 3688999998774 2
Q ss_pred C-CCceeEEEecccccccCCh-hhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 L-PEKVDIIVSEWMGFYLLHE-SMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~-~~~fDlIv~~~~~~~l~~~-~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
. +++||+|+++......+.. -....++..+.++|+|||+|++...+
T Consensus 144 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 144 KSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp TCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred hCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 2 3789999996543221110 01257889999999999999998644
No 218
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.92 E-value=5.2e-09 Score=94.41 Aligned_cols=93 Identities=12% Similarity=0.026 Sum_probs=67.7
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC---------------------CceEEEEcccccc--
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY---------------------LILEVIQNKIENV-- 103 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~---------------------~~i~~~~~d~~~~-- 103 (252)
..+.+|||||||+| .+ +..+++.. ..+|+++|+ .+++++.+|+..+
T Consensus 119 ~~~~~VLdIG~G~G--~~--------a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~ 188 (334)
T 1xj5_A 119 PNPKKVLVIGGGDG--GV--------LREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK 188 (334)
T ss_dssp SCCCEEEEETCSSS--HH--------HHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCcc--HH--------HHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHH
Confidence 45689999999999 55 55666653 468999999 1588999998775
Q ss_pred CCC-CceeEEEecccccccCCh-hhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 104 ELP-EKVDIIVSEWMGFYLLHE-SMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 104 ~~~-~~fDlIv~~~~~~~l~~~-~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
..+ ++||+|+++......... .....++..+.++|+|||+|++...+
T Consensus 189 ~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 189 NAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp TSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred hccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 223 789999996532111101 11468999999999999999997544
No 219
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.91 E-value=8.9e-10 Score=100.84 Aligned_cols=93 Identities=19% Similarity=0.127 Sum_probs=71.6
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCC-----C
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVEL-----P 106 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~-----~ 106 (252)
++.+|||+|||+| .+ +..++.. +.+|+|+|+ .++.++++|+.++.. .
T Consensus 209 ~~~~VLDlg~G~G--~~--------~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~ 277 (382)
T 1wxx_A 209 RGERALDVFSYAG--GF--------ALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEG 277 (382)
T ss_dssp CEEEEEEETCTTT--HH--------HHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTT
T ss_pred CCCeEEEeeeccC--HH--------HHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcC
Confidence 7789999999999 66 6677766 568999999 348999999987632 3
Q ss_pred CceeEEEecccccccC------ChhhHHHHHHHHhccccCCeEEEeeccccc
Q psy9773 107 EKVDIIVSEWMGFYLL------HESMIDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~------~~~~~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
.+||+|++++..+... .......++..+.++|+|||+|++++++..
T Consensus 278 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 278 ERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp CCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 6899999966422211 113567788999999999999999887643
No 220
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.91 E-value=1.3e-09 Score=100.46 Aligned_cols=95 Identities=15% Similarity=0.153 Sum_probs=69.8
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccC--CCCc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVE--LPEK 108 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~--~~~~ 108 (252)
..+|.+|||+||||| .+ ++.++..|+. |+++|+ ....+.++|+.++. .++.
T Consensus 212 ~~~g~~VLDlg~GtG--~~--------sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~ 280 (393)
T 4dmg_A 212 VRPGERVLDVYSYVG--GF--------ALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGP 280 (393)
T ss_dssp CCTTCEEEEESCTTT--HH--------HHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCC
T ss_pred hcCCCeEEEcccchh--HH--------HHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCC
Confidence 346899999999999 77 7788887766 999999 12357789988763 2345
Q ss_pred eeEEEecccccccC------ChhhHHHHHHHHhccccCCeEEEeeccccc
Q psy9773 109 VDIIVSEWMGFYLL------HESMIDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 109 fDlIv~~~~~~~l~------~~~~~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
||+|++++..+... .......++..+.++|+|||+|++.+++..
T Consensus 281 fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 281 FHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp EEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 99999966421110 113556888899999999999997776533
No 221
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.91 E-value=1.3e-09 Score=91.76 Aligned_cols=87 Identities=15% Similarity=0.106 Sum_probs=66.4
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEccccccC--
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENVE-- 104 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~~-- 104 (252)
..++.+|||+|||+| .. +..+++. + ..+++++|+ .++.++.+|+....
T Consensus 67 ~~~~~~vLdiG~G~G--~~--------~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~ 136 (229)
T 2avd_A 67 LIQAKKALDLGTFTG--YS--------ALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDE 136 (229)
T ss_dssp HTTCCEEEEECCTTS--HH--------HHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred hcCCCEEEEEcCCcc--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHH
Confidence 356789999999999 55 5555553 2 358999999 36899999986541
Q ss_pred C--C---CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 L--P---EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ~--~---~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
. . ++||+|++... ......++..+.++|+|||++++...
T Consensus 137 ~~~~~~~~~~D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 137 LLAAGEAGTFDVAVVDAD------KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp HHHTTCTTCEEEEEECSC------STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHhcCCCCCccEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 1 1 57999998543 23567889999999999999999764
No 222
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.90 E-value=1.7e-09 Score=92.43 Aligned_cols=86 Identities=15% Similarity=0.017 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEccccccC--C
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENVE--L 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~~--~ 105 (252)
.++.+|||+|||+|.. +..+++. + ..+++++|+ .++.++.+|+.+.. .
T Consensus 69 ~~~~~VLeiG~G~G~~----------~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l 138 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYS----------LLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNL 138 (237)
T ss_dssp TTCCEEEEECCTTSHH----------HHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred hCCCEEEEeCCCCCHH----------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 4678999999999944 4454443 2 358999999 36899999987651 1
Q ss_pred ------CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 ------PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ------~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.++||+|++... ......++..+.++|+|||++++...
T Consensus 139 ~~~~~~~~~fD~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 139 LQGQESEGSYDFGFVDAD------KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp HHSTTCTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred HhccCCCCCcCEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 368999998532 24677899999999999999998764
No 223
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.90 E-value=3e-09 Score=91.12 Aligned_cols=92 Identities=14% Similarity=0.161 Sum_probs=64.6
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC-------------------------CceEEEEccc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY-------------------------LILEVIQNKI 100 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~-------------------------~~i~~~~~d~ 100 (252)
..++.+|||+|||+| .+ +..++..++ .+++|+|+ .++.++++|+
T Consensus 47 ~~~~~~vLDiGcG~G--~~--------~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~ 116 (246)
T 2vdv_E 47 MTKKVTIADIGCGFG--GL--------MIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNA 116 (246)
T ss_dssp BSCCEEEEEETCTTS--HH--------HHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCT
T ss_pred CCCCCEEEEEcCCCC--HH--------HHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccH
Confidence 346789999999999 66 666676654 47999997 1578999999
Q ss_pred cc-cC--CC-CceeEEEecccccccCC-----hhhHHHHHHHHhccccCCeEEEeec
Q psy9773 101 EN-VE--LP-EKVDIIVSEWMGFYLLH-----ESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 101 ~~-~~--~~-~~fDlIv~~~~~~~l~~-----~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.. ++ ++ +++|.|++.....+... ......++..+.++|+|||+|++.+
T Consensus 117 ~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 117 MKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TSCGGGTSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 87 44 33 78999976321110000 0001478999999999999999854
No 224
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.90 E-value=2.1e-09 Score=96.33 Aligned_cols=92 Identities=16% Similarity=0.050 Sum_probs=67.3
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC---------------------CceEEEEccccccC-
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY---------------------LILEVIQNKIENVE- 104 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~---------------------~~i~~~~~d~~~~~- 104 (252)
..+.+|||+|||+| .+ +..+++. +..+|+++|+ .+++++.+|+....
T Consensus 115 ~~~~~VLdiG~G~G--~~--------~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~ 184 (321)
T 2pt6_A 115 KEPKNVLVVGGGDG--GI--------IRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE 184 (321)
T ss_dssp SSCCEEEEEECTTC--HH--------HHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH
T ss_pred CCCCEEEEEcCCcc--HH--------HHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh
Confidence 45689999999999 55 5566665 3468999999 15889999987642
Q ss_pred -CCCceeEEEecccccccCChhhH--HHHHHHHhccccCCeEEEeeccc
Q psy9773 105 -LPEKVDIIVSEWMGFYLLHESMI--DSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 -~~~~fDlIv~~~~~~~l~~~~~~--~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+++||+|+++..... .....+ ..++..+.++|+|||++++...+
T Consensus 185 ~~~~~fDvIi~d~~~p~-~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 185 NVTNTYDVIIVDSSDPI-GPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp HCCSCEEEEEEECCCSS-SGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hcCCCceEEEECCcCCC-CcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 2378999998653211 111122 68899999999999999997644
No 225
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.90 E-value=5.2e-10 Score=107.60 Aligned_cols=87 Identities=17% Similarity=0.105 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEcccccc--CC-CC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENV--EL-PE 107 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~--~~-~~ 107 (252)
.++.+|||||||+| .+ +..+++.|+ .|+|||. .++++.++++.++ .. ++
T Consensus 65 ~~~~~vLDvGCG~G--~~--------~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (569)
T 4azs_A 65 GRPLNVLDLGCAQG--FF--------SLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEG 133 (569)
T ss_dssp TSCCEEEEETCTTS--HH--------HHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTT
T ss_pred CCCCeEEEECCCCc--HH--------HHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCC
Confidence 45689999999999 88 999999986 6999999 3689999999887 33 37
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEe
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYP 146 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~ 146 (252)
+||+|+|..+++|+.+...+.. +..+.+.|+++|..++
T Consensus 134 ~fD~v~~~e~~ehv~~~~~~~~-~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 134 EFDLAIGLSVFHHIVHLHGIDE-VKRLLSRLADVTQAVI 171 (569)
T ss_dssp SCSEEEEESCHHHHHHHHCHHH-HHHHHHHHHHHSSEEE
T ss_pred CccEEEECcchhcCCCHHHHHH-HHHHHHHhccccceee
Confidence 8999999888888754432222 3345566677665543
No 226
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.90 E-value=3.5e-09 Score=93.13 Aligned_cols=92 Identities=16% Similarity=0.053 Sum_probs=68.1
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC---------------------CceEEEEccccccC-
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY---------------------LILEVIQNKIENVE- 104 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~---------------------~~i~~~~~d~~~~~- 104 (252)
..+.+|||||||+| .+ +..+++.. ..+++++|+ .+++++.+|+....
T Consensus 77 ~~~~~VLdiG~G~G--~~--------~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~ 146 (283)
T 2i7c_A 77 KEPKNVLVVGGGDG--GI--------IRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE 146 (283)
T ss_dssp SSCCEEEEEECTTS--HH--------HHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH
T ss_pred CCCCeEEEEeCCcC--HH--------HHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHH
Confidence 45689999999999 55 55666653 468999998 25789999987752
Q ss_pred -CCCceeEEEecccccccCChhhH--HHHHHHHhccccCCeEEEeeccc
Q psy9773 105 -LPEKVDIIVSEWMGFYLLHESMI--DSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 -~~~~fDlIv~~~~~~~l~~~~~~--~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+++||+|+++...... ....+ ..++..+.++|+|||+|++...+
T Consensus 147 ~~~~~fD~Ii~d~~~~~~-~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 147 NVTNTYDVIIVDSSDPIG-PAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp HCCSCEEEEEEECCCTTT-GGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred hCCCCceEEEEcCCCCCC-cchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 24789999995532221 11222 68999999999999999988654
No 227
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.90 E-value=5.1e-09 Score=97.88 Aligned_cols=97 Identities=14% Similarity=0.211 Sum_probs=70.3
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CC-CcEEEeeC-----------------CceEEEEccccccC--
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HP-LDHYAPQY-----------------LILEVIQNKIENVE-- 104 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~-~~v~gvD~-----------------~~i~~~~~d~~~~~-- 104 (252)
...++.+|||+|||+| .. +..++.. +. .+|+|+|+ .++.++++|+..++
T Consensus 256 ~~~~g~~VLDlgaG~G--~~--------t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~ 325 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPG--GK--------TTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI 325 (450)
T ss_dssp CCCTTCEEEESSCTTC--HH--------HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS
T ss_pred CCCCcCEEEEeCCCcc--HH--------HHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh
Confidence 4577899999999999 44 4444442 22 57999999 37899999998876
Q ss_pred CC-CceeEEEeccc---ccccCChhhH----------------HHHHHHHhccccCCeEEEeeccccc
Q psy9773 105 LP-EKVDIIVSEWM---GFYLLHESMI----------------DSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 105 ~~-~~fDlIv~~~~---~~~l~~~~~~----------------~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
++ ++||+|+++.. ...+...++. ..+|..+.++|+|||+|++++++..
T Consensus 326 ~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 44 68999997321 1122222221 5789999999999999999887644
No 228
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.89 E-value=4.1e-09 Score=91.02 Aligned_cols=86 Identities=14% Similarity=0.055 Sum_probs=68.0
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCCCceeE
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELPEKVDI 111 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~~~fDl 111 (252)
.++.+|||||||+| .| +..+. +...++|+|+ .+..+..+|....+++++||+
T Consensus 104 ~~p~~VLDlGCG~g--pL--------al~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~Dv 171 (253)
T 3frh_A 104 ETPRRVLDIACGLN--PL--------ALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDL 171 (253)
T ss_dssp CCCSEEEEETCTTT--HH--------HHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSE
T ss_pred CCCCeEEEecCCcc--HH--------HHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcch
Confidence 56789999999999 77 66666 5578999999 567788999999988899999
Q ss_pred EEecccccccCChhhHHHHHHHHhccccCCeEEEee
Q psy9773 112 IVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 112 Iv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~ 147 (252)
|++.-+.+++.+... ...+ ++...|+++|+++-.
T Consensus 172 vLllk~lh~LE~q~~-~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 172 ALIFKLLPLLEREQA-GSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp EEEESCHHHHHHHST-THHH-HHHHHCBCSEEEEEE
T ss_pred HHHHHHHHHhhhhch-hhHH-HHHHHhcCCCEEEEc
Confidence 999877788855542 2344 666788999877643
No 229
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.89 E-value=9.3e-10 Score=94.32 Aligned_cols=90 Identities=12% Similarity=0.057 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC------------------CceEEEEcccccc---CCC
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY------------------LILEVIQNKIENV---ELP 106 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~------------------~~i~~~~~d~~~~---~~~ 106 (252)
++.+|||+|||+| .+ +..++.. +..+|+|+|+ .++.++++|+.+. +++
T Consensus 65 ~~~~vLDlG~G~G--~~--------~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 134 (254)
T 2h00_A 65 TLRRGIDIGTGAS--CI--------YPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALK 134 (254)
T ss_dssp CCCEEEEESCTTT--TH--------HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTST
T ss_pred CCCEEEEeCCChh--HH--------HHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhh
Confidence 5789999999999 44 4444443 2357999999 2489999997662 233
Q ss_pred ----CceeEEEecccccccC-C-----------hhhHHHHHHHHhccccCCeEEEeec
Q psy9773 107 ----EKVDIIVSEWMGFYLL-H-----------ESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 107 ----~~fDlIv~~~~~~~l~-~-----------~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
++||+|++++..+... . ......++..+.++|+|||.+++..
T Consensus 135 ~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 135 EESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp TCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred cccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 4799999976533321 0 0112356778889999999887654
No 230
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.88 E-value=2.3e-08 Score=82.66 Aligned_cols=87 Identities=16% Similarity=0.108 Sum_probs=65.1
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCCCce
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELPEKV 109 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~~~f 109 (252)
...++.+|||+|||+| .+ +..++..++.+++|+|+ .++.++++|+.+++ ++|
T Consensus 46 ~~~~~~~vlD~g~G~G--~~--------~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--~~~ 113 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTG--VL--------SYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN--SRV 113 (207)
T ss_dssp TSSTTCEEEEETCTTC--HH--------HHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC--CCC
T ss_pred CCCCcCEEEEeeCCCC--HH--------HHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC--CCC
Confidence 3557889999999999 66 66777777668999999 16899999999874 589
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEee
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~ 147 (252)
|+|++++..+.... .....++..+.++| ||.+++.
T Consensus 114 D~v~~~~p~~~~~~-~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 114 DIVIMNPPFGSQRK-HADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp SEEEECCCCSSSST-TTTHHHHHHHHHHC--SEEEEEE
T ss_pred CEEEEcCCCccccC-CchHHHHHHHHHhc--CcEEEEE
Confidence 99999876444322 33456788888887 5544433
No 231
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.87 E-value=3.4e-09 Score=95.41 Aligned_cols=82 Identities=18% Similarity=0.173 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCCCCce
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVELPEKV 109 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~~~~f 109 (252)
.++.+|||+|||+| .+ +.. ++ ++.+|+|+|+ .++.++++|+.++. ++|
T Consensus 194 ~~~~~VLDlg~G~G--~~--------~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~f 259 (336)
T 2yx1_A 194 SLNDVVVDMFAGVG--PF--------SIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKG 259 (336)
T ss_dssp CTTCEEEETTCTTS--HH--------HHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCE
T ss_pred CCCCEEEEccCccC--HH--------HHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCC
Confidence 57899999999999 66 666 66 5678999999 36899999999887 789
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
|+|++++..+ ...++..+.++|+|||++++....
T Consensus 260 D~Vi~dpP~~-------~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 260 NRVIMNLPKF-------AHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp EEEEECCTTT-------GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cEEEECCcHh-------HHHHHHHHHHHcCCCCEEEEEEee
Confidence 9999965321 126778888999999999987665
No 232
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.87 E-value=3.8e-09 Score=92.14 Aligned_cols=82 Identities=18% Similarity=-0.070 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------------CceEEEEccccccCCC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------------LILEVIQNKIENVELP 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------------~~i~~~~~d~~~~~~~ 106 (252)
..+.+|||||||+| .+ +..+++.+ .+|+++|+ ++++++.+|...+.
T Consensus 71 ~~~~~VL~iG~G~G--~~--------~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDL--EL--------AHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-- 137 (262)
T ss_dssp SCCCEEEEESSCCH--HH--------HHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--
T ss_pred CCCCEEEEEeCCcC--HH--------HHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--
Confidence 35689999999999 55 55555556 78999999 25788888988765
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++||+|+++.. ++..++..+.++|+|||+|++...+
T Consensus 138 ~~fD~Ii~d~~--------dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 138 KKYDLIFCLQE--------PDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp CCEEEEEESSC--------CCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred hhCCEEEECCC--------ChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 78999998531 2234899999999999999987543
No 233
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.87 E-value=3.3e-09 Score=90.20 Aligned_cols=87 Identities=13% Similarity=0.006 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC------------------CceEEEEcccccc----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY------------------LILEVIQNKIENV---- 103 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~------------------~~i~~~~~d~~~~---- 103 (252)
.++.+|||+|||+| .. +..+++. + ..+++++|+ .++.++.+|+.+.
T Consensus 71 ~~~~~vLdiG~G~G--~~--------~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l 140 (232)
T 3cbg_A 71 TGAKQVLEIGVFRG--YS--------ALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQL 140 (232)
T ss_dssp HTCCEEEEECCTTS--HH--------HHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHH
T ss_pred cCCCEEEEecCCCC--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 46789999999999 54 5555553 2 247999999 3589999997543
Q ss_pred CC-C--CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 104 EL-P--EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 104 ~~-~--~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+. . ++||+|++... ......++..+.++|+|||+|++....
T Consensus 141 ~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 141 TQGKPLPEFDLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HTSSSCCCEEEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HhcCCCCCcCEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 22 1 68999998542 246778999999999999999997654
No 234
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.86 E-value=1.7e-09 Score=96.28 Aligned_cols=93 Identities=16% Similarity=0.035 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC---------------------CceEEEEcccccc-C
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY---------------------LILEVIQNKIENV-E 104 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~---------------------~~i~~~~~d~~~~-~ 104 (252)
..+.+|||||||+| .+ +..+++.+ ..+++++|+ .+++++.+|+..+ +
T Consensus 94 ~~~~~VLdiG~G~G--~~--------~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~ 163 (304)
T 2o07_A 94 PNPRKVLIIGGGDG--GV--------LREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK 163 (304)
T ss_dssp SSCCEEEEEECTTS--HH--------HHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCch--HH--------HHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh
Confidence 45689999999999 65 56666653 468999998 2578999998764 2
Q ss_pred C-CCceeEEEecccccccCCh-hhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 L-PEKVDIIVSEWMGFYLLHE-SMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~-~~~fDlIv~~~~~~~l~~~-~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
. +++||+|+++......+.. .....++..+.++|+|||+|++...+
T Consensus 164 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 164 QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 2 3789999995542211110 12356899999999999999998744
No 235
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.86 E-value=2.6e-09 Score=93.80 Aligned_cols=92 Identities=11% Similarity=-0.035 Sum_probs=65.9
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------C----------------ceEEEEccc
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------L----------------ILEVIQNKI 100 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~----------------~i~~~~~d~ 100 (252)
..+.+|||||||+| .+ +..+++.+..+++++|+ . +++++.+|+
T Consensus 74 ~~~~~VLdiG~G~G--~~--------~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~ 143 (281)
T 1mjf_A 74 PKPKRVLVIGGGDG--GT--------VREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDG 143 (281)
T ss_dssp SCCCEEEEEECTTS--HH--------HHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCH
T ss_pred CCCCeEEEEcCCcC--HH--------HHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECch
Confidence 45689999999999 65 56666665568999998 1 367888887
Q ss_pred cccCC-CCceeEEEecccccccCChhh--HHHHHHHHhccccCCeEEEeeccc
Q psy9773 101 ENVEL-PEKVDIIVSEWMGFYLLHESM--IDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 101 ~~~~~-~~~fDlIv~~~~~~~l~~~~~--~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
..+.. +++||+|+++....... ... ...++..+.++|+|||++++...+
T Consensus 144 ~~~l~~~~~fD~Ii~d~~~~~~~-~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 144 FEFIKNNRGFDVIIADSTDPVGP-AKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp HHHHHHCCCEEEEEEECCCCC------TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHhcccCCeeEEEECCCCCCCc-chhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 65421 47899999965422111 112 267899999999999999998654
No 236
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.85 E-value=2.3e-09 Score=95.91 Aligned_cols=92 Identities=15% Similarity=0.039 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC---------------------CceEEEEcccccc-C
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY---------------------LILEVIQNKIENV-E 104 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~---------------------~~i~~~~~d~~~~-~ 104 (252)
..+.+|||||||+| .+ +..+++. +..+|+++|+ .+++++.+|+... .
T Consensus 107 ~~~~~VLdIG~G~G--~~--------~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~ 176 (314)
T 2b2c_A 107 PDPKRVLIIGGGDG--GI--------LREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK 176 (314)
T ss_dssp SSCCEEEEESCTTS--HH--------HHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH
T ss_pred CCCCEEEEEcCCcC--HH--------HHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH
Confidence 35689999999999 55 5566654 3468999998 1478899998764 2
Q ss_pred -CCCceeEEEecccccccCChhhH--HHHHHHHhccccCCeEEEeeccc
Q psy9773 105 -LPEKVDIIVSEWMGFYLLHESMI--DSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 -~~~~fDlIv~~~~~~~l~~~~~~--~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+++||+|+++...+..+ ...+ ..++..+.++|+|||+|++...+
T Consensus 177 ~~~~~fD~Ii~d~~~~~~~-~~~l~t~~~l~~~~~~LkpgG~lv~~~~~ 224 (314)
T 2b2c_A 177 NHKNEFDVIITDSSDPVGP-AESLFGQSYYELLRDALKEDGILSSQGES 224 (314)
T ss_dssp HCTTCEEEEEECCC--------------HHHHHHHHEEEEEEEEEECCC
T ss_pred hcCCCceEEEEcCCCCCCc-chhhhHHHHHHHHHhhcCCCeEEEEECCC
Confidence 237899999965422111 1122 68899999999999999998754
No 237
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.85 E-value=3.4e-09 Score=94.59 Aligned_cols=93 Identities=17% Similarity=0.086 Sum_probs=68.0
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC----------------------CceEEEEcccccc-
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY----------------------LILEVIQNKIENV- 103 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~----------------------~~i~~~~~d~~~~- 103 (252)
..+.+|||||||+| .+ +..+++. +..+++++|+ .+++++.+|+..+
T Consensus 76 ~~~~~VLdiG~G~G--~~--------~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l 145 (314)
T 1uir_A 76 PEPKRVLIVGGGEG--AT--------LREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYL 145 (314)
T ss_dssp SCCCEEEEEECTTS--HH--------HHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHH
T ss_pred CCCCeEEEEcCCcC--HH--------HHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHH
Confidence 45689999999999 55 5566665 3468999998 1478999998774
Q ss_pred C-CCCceeEEEecccccc-cCC-hhh--HHHHHHHHhccccCCeEEEeeccc
Q psy9773 104 E-LPEKVDIIVSEWMGFY-LLH-ESM--IDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 104 ~-~~~~fDlIv~~~~~~~-l~~-~~~--~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+ .+++||+|+++...+. ... ... ...++..+.++|+|||+|++...+
T Consensus 146 ~~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 146 ERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp HHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred HhcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 2 2378999999654332 001 111 368899999999999999997654
No 238
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.85 E-value=1.1e-08 Score=94.92 Aligned_cols=98 Identities=17% Similarity=0.116 Sum_probs=70.7
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC----------------CceEEEEccccccC--CC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY----------------LILEVIQNKIENVE--LP 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~----------------~~i~~~~~d~~~~~--~~ 106 (252)
...++.+|||+|||+| .. +..++..+. .+|+|+|+ .++.++++|+..++ ++
T Consensus 243 ~~~~g~~VLDlgaG~G--~~--------t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~ 312 (429)
T 1sqg_A 243 APQNGEHILDLCAAPG--GK--------TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCG 312 (429)
T ss_dssp CCCTTCEEEEESCTTC--HH--------HHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHT
T ss_pred CCCCcCeEEEECCCch--HH--------HHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcc
Confidence 3567899999999999 55 555555432 58999999 25788999998875 34
Q ss_pred -CceeEEEeccc---ccccCChhhH----------------HHHHHHHhccccCCeEEEeecccccc
Q psy9773 107 -EKVDIIVSEWM---GFYLLHESMI----------------DSVIFARDKFLKPEGVMYPYKCILHS 153 (252)
Q Consensus 107 -~~fDlIv~~~~---~~~l~~~~~~----------------~~~l~~l~~~LkpgG~lv~~~~~~~~ 153 (252)
++||+|+++.- ...+.+.++. ..++..+.++|+|||+|++++++...
T Consensus 313 ~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~ 379 (429)
T 1sqg_A 313 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 (429)
T ss_dssp TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG
T ss_pred cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh
Confidence 68999997331 1122222221 47899999999999999998877443
No 239
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.84 E-value=1.1e-08 Score=93.29 Aligned_cols=89 Identities=10% Similarity=-0.043 Sum_probs=68.1
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC-----------------CceEEEEccccc-cCC-
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY-----------------LILEVIQNKIEN-VEL- 105 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~-----------------~~i~~~~~d~~~-~~~- 105 (252)
...++.+|||+| |+| .+ +..++..++ .+|+++|+ .++.++++|+.. ++.
T Consensus 169 ~~~~~~~VLDlG-G~G--~~--------~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~ 237 (373)
T 2qm3_A 169 GDLENKDIFVLG-DDD--LT--------SIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDY 237 (373)
T ss_dssp TCSTTCEEEEES-CTT--CH--------HHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTT
T ss_pred CCCCCCEEEEEC-CCC--HH--------HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhh
Confidence 345689999999 999 55 566666665 68999999 279999999988 553
Q ss_pred -CCceeEEEecccccccCChhhHHHHHHHHhccccCCeE-EEeecc
Q psy9773 106 -PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGV-MYPYKC 149 (252)
Q Consensus 106 -~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~-lv~~~~ 149 (252)
.++||+|++++..+.. ....++..+.++|+|||+ ++++..
T Consensus 238 ~~~~fD~Vi~~~p~~~~----~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 238 ALHKFDTFITDPPETLE----AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp TSSCBSEEEECCCSSHH----HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred ccCCccEEEECCCCchH----HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 2689999997653322 368899999999999994 455543
No 240
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.84 E-value=5.3e-09 Score=93.77 Aligned_cols=91 Identities=9% Similarity=0.067 Sum_probs=67.3
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC-----------------CceEEEEccccccC--CC-Cc
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------------LILEVIQNKIENVE--LP-EK 108 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------------~~i~~~~~d~~~~~--~~-~~ 108 (252)
..+|||||||+| .+ +..+++ .+..+++++|+ .+++++.+|+..+. .+ ++
T Consensus 90 ~~rVLdIG~G~G--~l--------a~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~ 159 (317)
T 3gjy_A 90 KLRITHLGGGAC--TM--------ARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPAS 159 (317)
T ss_dssp GCEEEEESCGGG--HH--------HHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTC
T ss_pred CCEEEEEECCcC--HH--------HHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCC
Confidence 359999999999 66 666666 33357999999 47899999998763 33 78
Q ss_pred eeEEEecccccccCC-hhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 109 VDIIVSEWMGFYLLH-ESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 109 fDlIv~~~~~~~l~~-~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
||+|++......... .-....++..++++|+|||+|++....
T Consensus 160 fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 160 RDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp EEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 999999653322111 111267899999999999999988753
No 241
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.83 E-value=3.5e-09 Score=99.53 Aligned_cols=97 Identities=14% Similarity=0.125 Sum_probs=68.7
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc--CCCcEEEeeC----------------CceEEEEccccccC--C
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV--HPLDHYAPQY----------------LILEVIQNKIENVE--L 105 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~--g~~~v~gvD~----------------~~i~~~~~d~~~~~--~ 105 (252)
...++.+|||+|||+| .. +..++.. +...|+|+|+ ..+.++++|+..+. .
T Consensus 98 ~~~~g~~VLDlgaGpG--~k--------t~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPG--GK--------TTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAF 167 (464)
T ss_dssp CCCTTCEEEESSCTTC--HH--------HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHH
T ss_pred CcCCCCEEEEEcCCcC--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhc
Confidence 3568899999999999 44 4455442 2247999999 12889999988875 3
Q ss_pred CCceeEEEecccc---cccCChhh----------------HHHHHHHHhccccCCeEEEeeccccc
Q psy9773 106 PEKVDIIVSEWMG---FYLLHESM----------------IDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 106 ~~~fDlIv~~~~~---~~l~~~~~----------------~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
+++||+|+++.-. ..+...++ ...+|..+.++|+|||+|+.+++++.
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 4789999973211 11111111 26789999999999999999887643
No 242
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.82 E-value=7.5e-09 Score=97.70 Aligned_cols=94 Identities=17% Similarity=0.166 Sum_probs=67.9
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhc-C-CCcEEEeeC-----------------CceEEEEccccccC--CCC
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H-PLDHYAPQY-----------------LILEVIQNKIENVE--LPE 107 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g-~~~v~gvD~-----------------~~i~~~~~d~~~~~--~~~ 107 (252)
++.+|||+|||+| .. +..++.. + ...|+|+|+ .++.++++|+..++ .++
T Consensus 117 ~g~~VLDl~aGpG--~k--------t~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~ 186 (479)
T 2frx_A 117 APQRVMDVAAAPG--SK--------TTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPE 186 (479)
T ss_dssp CCSEEEESSCTTS--HH--------HHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTT
T ss_pred CCCEEEEeCCCCC--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccc
Confidence 8899999999999 44 4455443 2 257999999 47889999998875 347
Q ss_pred ceeEEEecccc---cccCChh----------------hHHHHHHHHhccccCCeEEEeeccccc
Q psy9773 108 KVDIIVSEWMG---FYLLHES----------------MIDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 108 ~fDlIv~~~~~---~~l~~~~----------------~~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
+||+|+++.-. ..+...+ ....+|..+.++|+|||+|+.++++..
T Consensus 187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 89999984211 1111111 124788999999999999999887644
No 243
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.82 E-value=5.4e-09 Score=98.06 Aligned_cols=97 Identities=14% Similarity=0.081 Sum_probs=69.3
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc--CCCcEEEeeC-----------------CceEEEEccccccC--
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV--HPLDHYAPQY-----------------LILEVIQNKIENVE-- 104 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~--g~~~v~gvD~-----------------~~i~~~~~d~~~~~-- 104 (252)
...++.+|||+|||+|+. +..++.. +...|+|+|+ .++.++++|+..+.
T Consensus 102 ~~~~g~~VLDlcaGpGgk----------t~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGK----------STQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH 171 (456)
T ss_dssp CCCTTCEEEESSCTTCHH----------HHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH
T ss_pred CCCCCCEEEEECCCcCHH----------HHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh
Confidence 357889999999999944 4444432 2357999999 56889999998774
Q ss_pred CCCceeEEEecccc---cccCChhh----------------HHHHHHHHhccccCCeEEEeeccccc
Q psy9773 105 LPEKVDIIVSEWMG---FYLLHESM----------------IDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 105 ~~~~fDlIv~~~~~---~~l~~~~~----------------~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
.+++||+|+++.-. ..+...++ ...+|..+.++|+|||+|+.+++++.
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 34789999984321 11211111 22788999999999999999887643
No 244
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.81 E-value=9.8e-09 Score=93.69 Aligned_cols=89 Identities=16% Similarity=0.000 Sum_probs=65.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC------------------CceEEEEccccccCCC-
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY------------------LILEVIQNKIENVELP- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~------------------~~i~~~~~d~~~~~~~- 106 (252)
..++.+|||+|||+| .+ +..++..+. .+++|+|+ .++.++++|+.+++.+
T Consensus 215 ~~~~~~vLD~gCGsG--~~--------~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~ 284 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSG--TI--------LIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYV 284 (373)
T ss_dssp TCCSCCEEETTCTTC--HH--------HHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTC
T ss_pred cCCCCEEEEccCcCc--HH--------HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCccc
Confidence 567889999999999 77 677777664 37999999 3789999999999876
Q ss_pred CceeEEEecccccccC----Chhh-HHHHHHHHhccccCCeEEEee
Q psy9773 107 EKVDIIVSEWMGFYLL----HESM-IDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~----~~~~-~~~~l~~l~~~LkpgG~lv~~ 147 (252)
++||+|++++...... .... ...++..+.++| +|.+++.
T Consensus 285 ~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i 328 (373)
T 3tm4_A 285 DSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFI 328 (373)
T ss_dssp SCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEE
T ss_pred CCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEE
Confidence 7899999976432211 1112 367888888888 4444433
No 245
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.81 E-value=7.8e-09 Score=90.98 Aligned_cols=61 Identities=23% Similarity=0.261 Sum_probs=49.6
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVELP 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~~ 106 (252)
....++.+|||+|||+| .+ +..++..+ .+|+|+|+ .+++++++|+..++++
T Consensus 24 ~~~~~~~~VLDiG~G~G--~l--------t~~L~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 24 AALRPTDVVLEVGPGTG--NM--------TVKLLEKA-KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp TCCCTTCEEEEECCTTS--TT--------HHHHHHHS-SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC
T ss_pred cCCCCCCEEEEEcCccc--HH--------HHHHHhhC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch
Confidence 45678899999999999 66 66777765 57999999 2689999999887665
Q ss_pred CceeEEEeccc
Q psy9773 107 EKVDIIVSEWM 117 (252)
Q Consensus 107 ~~fDlIv~~~~ 117 (252)
+||+|+++..
T Consensus 93 -~fD~vv~nlp 102 (285)
T 1zq9_A 93 -FFDTCVANLP 102 (285)
T ss_dssp -CCSEEEEECC
T ss_pred -hhcEEEEecC
Confidence 7999999654
No 246
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.79 E-value=1.2e-08 Score=91.84 Aligned_cols=98 Identities=14% Similarity=0.101 Sum_probs=69.0
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC------CcEEEeeC----------------CceEEEEccccccCC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP------LDHYAPQY----------------LILEVIQNKIENVEL 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~------~~v~gvD~----------------~~i~~~~~d~~~~~~ 105 (252)
.++.+|||+|||+| .+ ...+++... .+++|+|+ .++.++++|......
T Consensus 129 ~~~~~VlDp~cGsG--~~--------l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~ 198 (344)
T 2f8l_A 129 KKNVSILDPACGTA--NL--------LTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLL 198 (344)
T ss_dssp CSEEEEEETTCTTS--HH--------HHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCC
T ss_pred CCCCEEEeCCCCcc--HH--------HHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccc
Confidence 46689999999999 44 333333211 47999999 257889999876544
Q ss_pred CCceeEEEecccccccCChh--------------hH-HHHHHHHhccccCCeEEEeeccccccCC
Q psy9773 106 PEKVDIIVSEWMGFYLLHES--------------MI-DSVIFARDKFLKPEGVMYPYKCILHSAP 155 (252)
Q Consensus 106 ~~~fDlIv~~~~~~~l~~~~--------------~~-~~~l~~l~~~LkpgG~lv~~~~~~~~~~ 155 (252)
.++||+|++++..+++.... +. ..++..+.+.|+|||++++..+......
T Consensus 199 ~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~ 263 (344)
T 2f8l_A 199 VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGT 263 (344)
T ss_dssp CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGS
T ss_pred cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCC
Confidence 47899999987644442211 12 2578889999999999999887654433
No 247
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.77 E-value=1.1e-08 Score=89.26 Aligned_cols=89 Identities=11% Similarity=-0.017 Sum_probs=69.6
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC----------------CceEEEEccccccCCCCcee
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY----------------LILEVIQNKIENVELPEKVD 110 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~----------------~~i~~~~~d~~~~~~~~~fD 110 (252)
.+..+|||||||+| .+ +..+... +..+++++|+ .+.++...|....+++++||
T Consensus 131 ~~p~~VLDLGCG~G--pL--------Al~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~D 200 (281)
T 3lcv_B 131 PRPNTLRDLACGLN--PL--------AAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPAD 200 (281)
T ss_dssp CCCSEEEETTCTTG--GG--------CCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCS
T ss_pred CCCceeeeeccCcc--HH--------HHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcc
Confidence 55789999999999 87 7776664 4568999999 45778888988888789999
Q ss_pred EEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 111 IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 111 lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
++++.-+.+++.... -...+ ++...|+|+|+++-..
T Consensus 201 vaL~lkti~~Le~q~-kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 201 VTLLLKTLPCLETQQ-RGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp EEEETTCHHHHHHHS-TTHHH-HHHHHSSCSEEEEEEE
T ss_pred hHHHHHHHHHhhhhh-hHHHH-HHHHHhCCCCEEEecc
Confidence 999988888874332 22444 7789999999987543
No 248
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.73 E-value=6.4e-09 Score=84.08 Aligned_cols=91 Identities=15% Similarity=0.036 Sum_probs=66.6
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCCceEEEEccccccCC---C-CceeEEEecccccc
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYLILEVIQNKIENVEL---P-EKVDIIVSEWMGFY 120 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~~i~~~~~d~~~~~~---~-~~fDlIv~~~~~~~ 120 (252)
..+.+|.+|||||||+.. + |.+..+......+. ..++.++++|+.++++ + ++||+|++..++++
T Consensus 8 ~g~~~g~~vL~~~~g~v~--v------D~s~~ml~~a~~~~----~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~ 75 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKSSP--V------EALKGLVDKLQALT----GNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGS 75 (176)
T ss_dssp TTCCTTSEEEEEECTTSC--H------HHHHHHHHHHHHHT----TTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTC
T ss_pred cCCCCCCEEEEecCCcee--e------eCCHHHHHHHHHhc----ccCcEEEEechhcCccccCCCCCEeEEEECChhhh
Confidence 357889999999999863 2 44554433211100 0248899999999876 4 78999999877666
Q ss_pred cCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 121 LLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 121 l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+. .++..+|.+++++|||||+|++..+
T Consensus 76 ~~--~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 76 TT--LHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp CC--CCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cc--cCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 51 3457899999999999999999655
No 249
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.72 E-value=3.7e-09 Score=90.70 Aligned_cols=91 Identities=20% Similarity=0.243 Sum_probs=64.8
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccccccCCC--C
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIENVELP--E 107 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~~~~~--~ 107 (252)
....++.+|||+|||+| .+ +..++..+ .+|+|+|+ .+++++++|+.+++++ +
T Consensus 25 ~~~~~~~~VLDiG~G~G--~~--------~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~ 93 (245)
T 1yub_A 25 LNLKETDTVYEIGTGKG--HL--------TTKLAKIS-KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQ 93 (245)
T ss_dssp CCCCSSEEEEECSCCCS--SC--------SHHHHHHS-SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSS
T ss_pred cCCCCCCEEEEEeCCCC--HH--------HHHHHHhC-CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCC
Confidence 45667889999999999 66 66777776 68999999 2688999999998765 5
Q ss_pred ceeEEEecccccccCChhhHHHH----------H----HHHhccccCCeEEEeecc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSV----------I----FARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~----------l----~~l~~~LkpgG~lv~~~~ 149 (252)
+| .|+++.. ++. ....+..+ + ..+.++|+|||+|++...
T Consensus 94 ~f-~vv~n~P-y~~-~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 94 RY-KIVGNIP-YHL-STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp EE-EEEEECC-SSS-CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred Cc-EEEEeCC-ccc-cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 78 6666542 221 11122222 2 557899999999877654
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.72 E-value=6.6e-08 Score=89.87 Aligned_cols=86 Identities=15% Similarity=0.120 Sum_probs=64.1
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCCCcee
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELPEKVD 110 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~~~fD 110 (252)
..++.+|||+|||+| .+ +..+++.+ .+|+|+|+ ..+.|+++|+.++... +||
T Consensus 288 ~~~~~~VLDlgcG~G--~~--------sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~-~fD 355 (425)
T 2jjq_A 288 LVEGEKILDMYSGVG--TF--------GIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK-GFD 355 (425)
T ss_dssp HCCSSEEEEETCTTT--HH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT-TCS
T ss_pred cCCCCEEEEeeccch--HH--------HHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc-CCC
Confidence 457789999999999 77 77777764 68999999 1188999999887543 899
Q ss_pred EEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 111 IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 111 lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+|++++....+ ...++..+ +.|+|+|++++++..
T Consensus 356 ~Vv~dPPr~g~-----~~~~~~~l-~~l~p~givyvsc~p 389 (425)
T 2jjq_A 356 TVIVDPPRAGL-----HPRLVKRL-NREKPGVIVYVSCNP 389 (425)
T ss_dssp EEEECCCTTCS-----CHHHHHHH-HHHCCSEEEEEESCH
T ss_pred EEEEcCCccch-----HHHHHHHH-HhcCCCcEEEEECCh
Confidence 99996642211 22355555 358999999998754
No 251
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.71 E-value=3e-08 Score=91.00 Aligned_cols=106 Identities=11% Similarity=0.065 Sum_probs=75.9
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC--------------------------------
Q psy9773 35 EAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-------------------------------- 82 (252)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-------------------------------- 82 (252)
..+...|.......++.+|||+|||+| ++ .+.++..++
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSG--t~--------lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~ 250 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSG--TI--------LIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFN 250 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTC--HH--------HHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCC--HH--------HHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHH
Confidence 445666766677778899999999999 66 444443321
Q ss_pred -------CcEEEeeC------------------CceEEEEccccccCCCCceeEEEeccccc-ccCChhhHHHHHHHHhc
Q psy9773 83 -------LDHYAPQY------------------LILEVIQNKIENVELPEKVDIIVSEWMGF-YLLHESMIDSVIFARDK 136 (252)
Q Consensus 83 -------~~v~gvD~------------------~~i~~~~~d~~~~~~~~~fDlIv~~~~~~-~l~~~~~~~~~l~~l~~ 136 (252)
.+|+|+|+ .++++.++|+.+++.+.+||+|++++-.. .+.....+..+...+.+
T Consensus 251 ~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~ 330 (385)
T 3ldu_A 251 KIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGY 330 (385)
T ss_dssp HSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHH
T ss_pred HhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHH
Confidence 36999999 36999999999998778999999977522 12122356667777777
Q ss_pred cccC--CeEEEeeccc
Q psy9773 137 FLKP--EGVMYPYKCI 150 (252)
Q Consensus 137 ~Lkp--gG~lv~~~~~ 150 (252)
.|++ ||.+++.++.
T Consensus 331 ~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 331 AFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHTSBSCEEEEEESC
T ss_pred HHhhCCCCEEEEEECC
Confidence 7776 8888776553
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.66 E-value=9.1e-08 Score=87.86 Aligned_cols=106 Identities=17% Similarity=0.158 Sum_probs=75.9
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC--------------------------------
Q psy9773 35 EAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-------------------------------- 82 (252)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-------------------------------- 82 (252)
..+..++.......++..|||++||+| ++ .+.++..+.
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSG--t~--------lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~ 249 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSG--TF--------CIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADE 249 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTS--HH--------HHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCC--HH--------HHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHH
Confidence 445566666567778899999999999 66 444433221
Q ss_pred -------CcEEEeeC------------------CceEEEEccccccCCCCceeEEEecccc-cccCChhhHHHHHHHHhc
Q psy9773 83 -------LDHYAPQY------------------LILEVIQNKIENVELPEKVDIIVSEWMG-FYLLHESMIDSVIFARDK 136 (252)
Q Consensus 83 -------~~v~gvD~------------------~~i~~~~~d~~~~~~~~~fDlIv~~~~~-~~l~~~~~~~~~l~~l~~ 136 (252)
.+++|+|+ .++.++++|+.+++.+.+||+|++++-. ..+....++..+...+.+
T Consensus 250 ~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~ 329 (384)
T 3ldg_A 250 QADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGE 329 (384)
T ss_dssp HCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHH
T ss_pred hhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHH
Confidence 35999999 3689999999999877889999997642 223334566777777767
Q ss_pred cccC--CeEEEeeccc
Q psy9773 137 FLKP--EGVMYPYKCI 150 (252)
Q Consensus 137 ~Lkp--gG~lv~~~~~ 150 (252)
.|++ ||.+++.++.
T Consensus 330 ~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 330 TFAPLKTWSQFILTND 345 (384)
T ss_dssp HHTTCTTSEEEEEESC
T ss_pred HHhhCCCcEEEEEECC
Confidence 7765 8888877653
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.65 E-value=5.3e-08 Score=89.67 Aligned_cols=105 Identities=12% Similarity=0.089 Sum_probs=72.9
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC--------------------------------
Q psy9773 35 EAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-------------------------------- 82 (252)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-------------------------------- 82 (252)
..+...+.......++.+|||++||+| ++ .+.++..+.
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSG--t~--------~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~ 256 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSG--TI--------PIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAED 256 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTS--HH--------HHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCC--HH--------HHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHH
Confidence 345555665566778899999999999 66 444443221
Q ss_pred -------CcEEEeeC------------------CceEEEEccccccCCCCceeEEEeccccc-ccCChhhHHHHHHHHhc
Q psy9773 83 -------LDHYAPQY------------------LILEVIQNKIENVELPEKVDIIVSEWMGF-YLLHESMIDSVIFARDK 136 (252)
Q Consensus 83 -------~~v~gvD~------------------~~i~~~~~d~~~~~~~~~fDlIv~~~~~~-~l~~~~~~~~~l~~l~~ 136 (252)
.+|+|+|+ .++.++++|+.+++.+.+||+|++++-.. .+.....+..+...+.+
T Consensus 257 ~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~ 336 (393)
T 3k0b_A 257 LANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGI 336 (393)
T ss_dssp HCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHH
T ss_pred hhcccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHH
Confidence 35999999 35899999999998778999999976421 11112345556666666
Q ss_pred cccC--CeEEEeecc
Q psy9773 137 FLKP--EGVMYPYKC 149 (252)
Q Consensus 137 ~Lkp--gG~lv~~~~ 149 (252)
.|++ ||.+++.++
T Consensus 337 ~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 337 VYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHTCTTCEEEEEEC
T ss_pred HHhcCCCCEEEEEEC
Confidence 6665 888877665
No 254
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.65 E-value=8.3e-08 Score=83.97 Aligned_cols=101 Identities=13% Similarity=0.004 Sum_probs=67.3
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeCC---------------ceEEEEccc
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQYL---------------ILEVIQNKI 100 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~~---------------~i~~~~~d~ 100 (252)
+..+... ..+.++.+|||||||+| -+ +..++.. ++..++|+|+. ++..++.++
T Consensus 63 L~ei~ek-~~l~~~~~VLDLGaAPG--GW--------SQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~ 131 (277)
T 3evf_A 63 LRWFHER-GYVKLEGRVIDLGCGRG--GW--------CYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKT 131 (277)
T ss_dssp HHHHHHT-TSSCCCEEEEEETCTTC--HH--------HHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSC
T ss_pred HHHHHHh-CCCCCCCEEEEecCCCC--HH--------HHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccc
Confidence 4444444 56678889999999999 66 7766653 55567777761 445566665
Q ss_pred cccCCC-CceeEEEecccccccCC-hhh---HHHHHHHHhccccCC-eEEEeecc
Q psy9773 101 ENVELP-EKVDIIVSEWMGFYLLH-ESM---IDSVIFARDKFLKPE-GVMYPYKC 149 (252)
Q Consensus 101 ~~~~~~-~~fDlIv~~~~~~~l~~-~~~---~~~~l~~l~~~Lkpg-G~lv~~~~ 149 (252)
....++ .+||+|+|+.+.+ ..+ ..+ ...+|..+.++|+|| |.|++-..
T Consensus 132 dv~~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 132 DIHRLEPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp CTTTSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred eehhcCCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 444444 6899999977544 111 111 123467788999999 99998654
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.64 E-value=2.8e-08 Score=92.62 Aligned_cols=103 Identities=18% Similarity=-0.029 Sum_probs=70.1
Q ss_pred HHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc--------------CCCcEEEeeC-------------
Q psy9773 38 RAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV--------------HPLDHYAPQY------------- 90 (252)
Q Consensus 38 ~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~--------------g~~~v~gvD~------------- 90 (252)
.+.+.......++.+|||+|||+|+.++ .+++. ...+++|+|+
T Consensus 160 ~~~mv~~l~~~~~~~VlDpacGsG~fl~----------~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 160 IQAMVDCINPQMGETVCDPACGTGGFLL----------TAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp HHHHHHHHCCCTTCCEEETTCTTCHHHH----------HHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCEEeccCCCcchHHH----------HHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 3334333344667899999999994433 22221 1247999999
Q ss_pred ----C--ceEEEEccccccCCCCceeEEEecccccccCChh--------------hHHHHHHHHhccccCCeEEEeeccc
Q psy9773 91 ----L--ILEVIQNKIENVELPEKVDIIVSEWMGFYLLHES--------------MIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 91 ----~--~i~~~~~d~~~~~~~~~fDlIv~~~~~~~l~~~~--------------~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
. ++.+.++|....+...+||+|++++......... ....++..+.++|+|||++.+..+.
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred HhCCCcCCCCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 1 5678999988776556899999976543322111 1247888899999999999887764
No 256
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.63 E-value=1.8e-07 Score=87.01 Aligned_cols=87 Identities=13% Similarity=0.029 Sum_probs=64.1
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccC----
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVE---- 104 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~---- 104 (252)
...++.+|||+|||+| .+ +..++.. ..+|+|+|+ .++.|+++|+.+..
T Consensus 283 ~~~~~~~VLDlgcG~G--~~--------~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~ 351 (433)
T 1uwv_A 283 DVQPEDRVLDLFCGMG--NF--------TLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQP 351 (433)
T ss_dssp TCCTTCEEEEESCTTT--TT--------HHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSG
T ss_pred cCCCCCEEEECCCCCC--HH--------HHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhh
Confidence 4567789999999999 66 6677766 468999999 36899999998742
Q ss_pred CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 105 LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 105 ~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++ ++||+|++++-...+ ..++..+. .++|++++++++..
T Consensus 352 ~~~~~fD~Vv~dPPr~g~------~~~~~~l~-~~~p~~ivyvsc~p 391 (433)
T 1uwv_A 352 WAKNGFDKVLLDPARAGA------AGVMQQII-KLEPIRIVYVSCNP 391 (433)
T ss_dssp GGTTCCSEEEECCCTTCC------HHHHHHHH-HHCCSEEEEEESCH
T ss_pred hhcCCCCEEEECCCCccH------HHHHHHHH-hcCCCeEEEEECCh
Confidence 22 679999996642222 23455553 47899999998754
No 257
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.60 E-value=1.2e-07 Score=86.25 Aligned_cols=95 Identities=18% Similarity=0.166 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------C-------------ceEEEEccccc
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------L-------------ILEVIQNKIEN 102 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~-------------~i~~~~~d~~~ 102 (252)
..+++||+||||+| .+ +..+++.++.+|+++|+ . +++++.+|+..
T Consensus 187 p~pkrVL~IGgG~G--~~--------arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~ 256 (364)
T 2qfm_A 187 YTGKDVLILGGGDG--GI--------LCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP 256 (364)
T ss_dssp CTTCEEEEEECTTC--HH--------HHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH
T ss_pred CCCCEEEEEECChh--HH--------HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHH
Confidence 35789999999999 65 56666666678999999 1 58899999987
Q ss_pred cCC-----CCceeEEEecccc-cc--cCChhhHHHHHHHH----hccccCCeEEEeeccccc
Q psy9773 103 VEL-----PEKVDIIVSEWMG-FY--LLHESMIDSVIFAR----DKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 103 ~~~-----~~~fDlIv~~~~~-~~--l~~~~~~~~~l~~l----~~~LkpgG~lv~~~~~~~ 152 (252)
+.. .++||+||+.... .. .+....-..++..+ .++|+|||++++...+.+
T Consensus 257 ~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~ 318 (364)
T 2qfm_A 257 VLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN 318 (364)
T ss_dssp HHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT
T ss_pred HHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcc
Confidence 642 3689999996532 11 01001123444444 899999999999876643
No 258
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.60 E-value=1e-07 Score=84.46 Aligned_cols=60 Identities=23% Similarity=0.257 Sum_probs=45.2
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCCCc
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELPEK 108 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~~~ 108 (252)
...++.+|||+|||+| .+ +..++..+ .+|+|+|+ .++.++++|+..++.+ +
T Consensus 39 ~~~~~~~VLDiG~G~G--~l--------t~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~-~ 106 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTG--NL--------TVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP-K 106 (299)
T ss_dssp CCCTTCEEEEECCTTS--TT--------HHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC-C
T ss_pred CCCCcCEEEEEcCcCc--HH--------HHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc-c
Confidence 4567899999999999 66 66777764 57999999 3688999999887654 8
Q ss_pred eeEEEeccc
Q psy9773 109 VDIIVSEWM 117 (252)
Q Consensus 109 fDlIv~~~~ 117 (252)
||+|+++..
T Consensus 107 ~D~Vv~n~p 115 (299)
T 2h1r_A 107 FDVCTANIP 115 (299)
T ss_dssp CSEEEEECC
T ss_pred CCEEEEcCC
Confidence 999999664
No 259
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.52 E-value=2.5e-07 Score=82.10 Aligned_cols=68 Identities=22% Similarity=0.298 Sum_probs=54.3
Q ss_pred HHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEcccccc
Q psy9773 39 AAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIENV 103 (252)
Q Consensus 39 ~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~~ 103 (252)
+.+.......++.+|||||||+| .+ +..++..+ .+|+|+|+ .+++++++|+..+
T Consensus 40 ~~Iv~~l~~~~~~~VLEIG~G~G--~l--------T~~La~~~-~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~ 108 (295)
T 3gru_A 40 NKAVESANLTKDDVVLEIGLGKG--IL--------TEELAKNA-KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKV 108 (295)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTS--HH--------HHHHHHHS-SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTS
T ss_pred HHHHHhcCCCCcCEEEEECCCch--HH--------HHHHHhcC-CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhC
Confidence 33444456678899999999999 66 67777764 68999999 5789999999998
Q ss_pred CCC-CceeEEEeccc
Q psy9773 104 ELP-EKVDIIVSEWM 117 (252)
Q Consensus 104 ~~~-~~fDlIv~~~~ 117 (252)
+++ .+||+|+++..
T Consensus 109 ~~~~~~fD~Iv~NlP 123 (295)
T 3gru_A 109 DLNKLDFNKVVANLP 123 (295)
T ss_dssp CGGGSCCSEEEEECC
T ss_pred CcccCCccEEEEeCc
Confidence 776 57999998653
No 260
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.51 E-value=4.5e-08 Score=90.11 Aligned_cols=85 Identities=13% Similarity=-0.087 Sum_probs=66.5
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc--CCCcEEEeeC-----------------C-c-eEEEEccccccCC-
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV--HPLDHYAPQY-----------------L-I-LEVIQNKIENVEL- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~--g~~~v~gvD~-----------------~-~-i~~~~~d~~~~~~- 105 (252)
.+|.+|||++||+| .+ ++.+++. |+.+|+++|+ . + +.++++|+..+..
T Consensus 51 ~~g~~VLDlfaGtG--~~--------sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~ 120 (392)
T 3axs_A 51 GRPVKVADPLSASG--IR--------AIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRK 120 (392)
T ss_dssp CSCEEEEESSCTTS--HH--------HHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHS
T ss_pred CCCCEEEECCCccc--HH--------HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHH
Confidence 46789999999999 77 7777773 5578999999 2 3 8999999877632
Q ss_pred --CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 --PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 --~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+.||+|++++. .....++..+.++|+|||+|++++.
T Consensus 121 ~~~~~fD~V~lDP~-------g~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 121 EWGFGFDYVDLDPF-------GTPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp CCSSCEEEEEECCS-------SCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhCCCCcEEEECCC-------cCHHHHHHHHHHHhCCCCEEEEEec
Confidence 367999999772 1224578888899999999998774
No 261
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.43 E-value=1.1e-07 Score=87.05 Aligned_cols=83 Identities=12% Similarity=-0.007 Sum_probs=64.3
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC--------------C---------------c---eEE
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY--------------L---------------I---LEV 95 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~--------------~---------------~---i~~ 95 (252)
++.+|||+|||+| .+ ++.++.. ++.+|+++|+ . . +.+
T Consensus 47 ~~~~VLDl~aGtG--~~--------~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v 116 (378)
T 2dul_A 47 NPKIVLDALSATG--IR--------GIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVI 116 (378)
T ss_dssp CCSEEEESSCTTS--HH--------HHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEE
T ss_pred CCCEEEECCCchh--HH--------HHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEE
Confidence 6789999999999 77 7777765 5567999999 2 2 778
Q ss_pred EEccccccCC--CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 96 IQNKIENVEL--PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 96 ~~~d~~~~~~--~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+++|+..+.. ..+||+|++++. .....++..+.+.|+|||++++++
T Consensus 117 ~~~Da~~~~~~~~~~fD~I~lDP~-------~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 117 NHDDANRLMAERHRYFHFIDLDPF-------GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp EESCHHHHHHHSTTCEEEEEECCS-------SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCcHHHHHHhccCCCCEEEeCCC-------CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 8899877632 357999998652 123467888889999999998875
No 262
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.43 E-value=1.7e-06 Score=74.22 Aligned_cols=68 Identities=15% Similarity=0.156 Sum_probs=51.4
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEcccc
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIE 101 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~ 101 (252)
+...+.......++.+|||+|||+| .+ +..++..+ .+|+|+|+ .+++++++|+.
T Consensus 18 ~~~~i~~~~~~~~~~~VLDiG~G~G--~l--------t~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~ 86 (244)
T 1qam_A 18 NIDKIMTNIRLNEHDNIFEIGSGKG--HF--------TLELVQRC-NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDIL 86 (244)
T ss_dssp HHHHHHTTCCCCTTCEEEEECCTTS--HH--------HHHHHHHS-SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGG
T ss_pred HHHHHHHhCCCCCCCEEEEEeCCch--HH--------HHHHHHcC-CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHH
Confidence 3444555556678899999999999 66 67777776 67999999 37899999999
Q ss_pred ccCCC--CceeEEEecc
Q psy9773 102 NVELP--EKVDIIVSEW 116 (252)
Q Consensus 102 ~~~~~--~~fDlIv~~~ 116 (252)
.++++ ..| .|+++.
T Consensus 87 ~~~~~~~~~~-~vv~nl 102 (244)
T 1qam_A 87 QFKFPKNQSY-KIFGNI 102 (244)
T ss_dssp GCCCCSSCCC-EEEEEC
T ss_pred hCCcccCCCe-EEEEeC
Confidence 98776 345 455543
No 263
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.43 E-value=1.3e-06 Score=77.81 Aligned_cols=96 Identities=14% Similarity=0.063 Sum_probs=64.7
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhh--cCCCcEEEeeC-----------------CceEEEEccccccCCC
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK--VHPLDHYAPQY-----------------LILEVIQNKIENVELP 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~--~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~ 106 (252)
...+|.+|||+|||+|+. +..++. .+...|+|+|+ .++.++++|+..+...
T Consensus 99 ~~~~g~~VLDlcaG~G~k----------t~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~ 168 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNK----------TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPS 168 (309)
T ss_dssp CCCTTCEEEESSCTTCHH----------HHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTT
T ss_pred CCCCCCEEEEeCCChhHH----------HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcc
Confidence 357889999999999944 444444 23358999999 4789999999887543
Q ss_pred ----CceeEEEecccc---cccCCh-----------hh-------HHHHHHHHhccccCCeEEEeeccccc
Q psy9773 107 ----EKVDIIVSEWMG---FYLLHE-----------SM-------IDSVIFARDKFLKPEGVMYPYKCILH 152 (252)
Q Consensus 107 ----~~fDlIv~~~~~---~~l~~~-----------~~-------~~~~l~~l~~~LkpgG~lv~~~~~~~ 152 (252)
.+||+|+++.-. ..+... .+ ...+|..+.++|+ ||+|+.++++++
T Consensus 169 ~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 169 DPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp CGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred ccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 579999984211 111110 11 1246777878886 999998877644
No 264
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.41 E-value=4.9e-07 Score=82.19 Aligned_cols=81 Identities=12% Similarity=0.043 Sum_probs=56.1
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCC--C----
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVEL--P---- 106 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~--~---- 106 (252)
+.+|||+|||+| .+ ++.+++. +.+|+|+|+ .++.|+++|+.++.. .
T Consensus 214 ~~~vLDl~cG~G--~~--------~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~ 282 (369)
T 3bt7_A 214 KGDLLELYCGNG--NF--------SLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVRE 282 (369)
T ss_dssp CSEEEEESCTTS--HH--------HHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCC
T ss_pred CCEEEEccCCCC--HH--------HHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccc
Confidence 578999999999 77 7777764 468999999 478999999876521 1
Q ss_pred -----------CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 -----------EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 -----------~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+||+|++++-...+ ...+.++|+++|+++..+++
T Consensus 283 ~~~l~~~~~~~~~fD~Vv~dPPr~g~---------~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 283 FNRLQGIDLKSYQCETIFVDPPRSGL---------DSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp CTTGGGSCGGGCCEEEEEECCCTTCC---------CHHHHHHHTTSSEEEEEESC
T ss_pred cccccccccccCCCCEEEECcCcccc---------HHHHHHHHhCCCEEEEEECC
Confidence 279999986632211 12233445577777655543
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.40 E-value=9e-07 Score=77.51 Aligned_cols=86 Identities=14% Similarity=0.159 Sum_probs=60.4
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------------CceEEEEccccccCCC--Cc
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------------LILEVIQNKIENVELP--EK 108 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------------~~i~~~~~d~~~~~~~--~~ 108 (252)
....++ +|||+|||+| .+ +..++..+ .+|+|+|+ .+++++++|+..++++ ..
T Consensus 43 ~~~~~~-~VLEIG~G~G--~l--------t~~L~~~~-~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~ 110 (271)
T 3fut_A 43 ARPFTG-PVFEVGPGLG--AL--------TRALLEAG-AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQ 110 (271)
T ss_dssp HCCCCS-CEEEECCTTS--HH--------HHHHHHTT-CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCT
T ss_pred cCCCCC-eEEEEeCchH--HH--------HHHHHHcC-CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccC
Confidence 345677 9999999999 77 77777776 57999999 4699999999998776 36
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEee
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~ 147 (252)
+|.|+++.- +++ ..+-+..++.. ..-+.+.+++.
T Consensus 111 ~~~iv~NlP-y~i-ss~il~~ll~~---~~~~~~~lm~Q 144 (271)
T 3fut_A 111 GSLLVANLP-YHI-ATPLVTRLLKT---GRFARLVFLVQ 144 (271)
T ss_dssp TEEEEEEEC-SSC-CHHHHHHHHHH---CCEEEEEEEEE
T ss_pred ccEEEecCc-ccc-cHHHHHHHhcC---CCCCEEEEEee
Confidence 899988653 333 22334444443 11235555554
No 266
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.39 E-value=1.3e-06 Score=80.00 Aligned_cols=47 Identities=19% Similarity=0.213 Sum_probs=39.5
Q ss_pred CCC-CceeEEEecccccccCChh-----------------------------------hHHHHHHHHhccccCCeEEEee
Q psy9773 104 ELP-EKVDIIVSEWMGFYLLHES-----------------------------------MIDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 104 ~~~-~~fDlIv~~~~~~~l~~~~-----------------------------------~~~~~l~~l~~~LkpgG~lv~~ 147 (252)
.+| +++|+|+++.++|++...+ |+..+|+.+++.|+|||+|+++
T Consensus 145 lfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~ 224 (374)
T 3b5i_A 145 LFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLV 224 (374)
T ss_dssp CSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 344 8999999999999987433 6777899999999999999998
Q ss_pred ccc
Q psy9773 148 KCI 150 (252)
Q Consensus 148 ~~~ 150 (252)
...
T Consensus 225 ~~g 227 (374)
T 3b5i_A 225 CLG 227 (374)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 267
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.39 E-value=4.3e-07 Score=79.59 Aligned_cols=101 Identities=12% Similarity=0.010 Sum_probs=64.3
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeCC---------------ceEEEEccc
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQYL---------------ILEVIQNKI 100 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~~---------------~i~~~~~d~ 100 (252)
+..+... ..+.++.+|||||||+| -+ +..++. .++..|+|+|+. ++..+..++
T Consensus 79 L~ei~eK-~~Lk~~~~VLDLGaAPG--GW--------sQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~ 147 (282)
T 3gcz_A 79 LRWMEER-GYVKPTGIVVDLGCGRG--GW--------SYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKT 147 (282)
T ss_dssp HHHHHHT-TSCCCCEEEEEETCTTC--HH--------HHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSC
T ss_pred HHHHHHh-cCCCCCCEEEEeCCCCC--HH--------HHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCc
Confidence 3443433 36678889999999999 66 777664 556678899881 222333332
Q ss_pred cccCCC-CceeEEEecccccccCC-h-h--hHHHHHHHHhccccCC--eEEEeecc
Q psy9773 101 ENVELP-EKVDIIVSEWMGFYLLH-E-S--MIDSVIFARDKFLKPE--GVMYPYKC 149 (252)
Q Consensus 101 ~~~~~~-~~fDlIv~~~~~~~l~~-~-~--~~~~~l~~l~~~Lkpg--G~lv~~~~ 149 (252)
.-..++ .++|+|+|+.+.+ ... . . ....+|.-+.++|+|| |.|++-..
T Consensus 148 dv~~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF 202 (282)
T 3gcz_A 148 DVFNMEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVL 202 (282)
T ss_dssp CGGGSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEES
T ss_pred chhhcCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence 222233 7899999977654 111 1 1 1223567778999999 99998654
No 268
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.31 E-value=1.8e-06 Score=78.58 Aligned_cols=100 Identities=13% Similarity=0.099 Sum_probs=65.8
Q ss_pred CCCEEEEEcCCcCchhh--hhccCccchHHH--h-----hcCCCcEEEeeC------------C------ceEEEEcccc
Q psy9773 49 AGKTVLDVGTGTGKSIL--LQGHGVDHHSFC--T-----KVHPLDHYAPQY------------L------ILEVIQNKIE 101 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~l--l~~~~v~~s~~~--a-----~~g~~~v~gvD~------------~------~i~~~~~d~~ 101 (252)
..-+|+|+||++|.+++ ++.+ |+ ++.- . ..+..+|+.-|. . +..|+.+...
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~i-i~-~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpg 128 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTEL-IK-TVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPG 128 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTT-HH-HHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEES
T ss_pred CceEEEecCCCCCcchHHHHHHH-HH-HHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecch
Confidence 34689999999997776 1111 00 0000 0 011135777787 1 2245554444
Q ss_pred c---cCCC-CceeEEEecccccccCChh------------------------------hHHHHHHHHhccccCCeEEEee
Q psy9773 102 N---VELP-EKVDIIVSEWMGFYLLHES------------------------------MIDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 102 ~---~~~~-~~fDlIv~~~~~~~l~~~~------------------------------~~~~~l~~l~~~LkpgG~lv~~ 147 (252)
. -.+| +++|+|+++.++|++...+ |+..+|....+.|+|||+|++.
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 4 3555 8999999999988876422 5677799999999999999998
Q ss_pred ccc
Q psy9773 148 KCI 150 (252)
Q Consensus 148 ~~~ 150 (252)
...
T Consensus 209 ~~g 211 (359)
T 1m6e_X 209 ILG 211 (359)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 269
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.30 E-value=1.4e-06 Score=75.63 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=48.1
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccccccCCC---
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIENVELP--- 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~~~~~--- 106 (252)
....++.+|||||||+| .+ +..++..+ .+|+|+|+ .+++++++|+..++++
T Consensus 25 ~~~~~~~~VLEIG~G~G--~l--------t~~La~~~-~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~ 93 (255)
T 3tqs_A 25 IHPQKTDTLVEIGPGRG--AL--------TDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVK 93 (255)
T ss_dssp HCCCTTCEEEEECCTTT--TT--------HHHHTTTS-SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSC
T ss_pred cCCCCcCEEEEEccccc--HH--------HHHHHHhC-CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhc
Confidence 35677899999999999 66 77777776 68999999 4789999999998764
Q ss_pred --CceeEEEecc
Q psy9773 107 --EKVDIIVSEW 116 (252)
Q Consensus 107 --~~fDlIv~~~ 116 (252)
++|| |+++.
T Consensus 94 ~~~~~~-vv~Nl 104 (255)
T 3tqs_A 94 TDKPLR-VVGNL 104 (255)
T ss_dssp CSSCEE-EEEEC
T ss_pred cCCCeE-EEecC
Confidence 4688 55544
No 270
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.28 E-value=4e-06 Score=71.76 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=67.9
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC----------------CceEEEEc-
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------------LILEVIQN- 98 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------------~~i~~~~~- 98 (252)
+..+..+. .+.++.+||||||++| -+ +.+++. .|+.+|+|+|+ ..++|.++
T Consensus 67 L~ei~ek~-~l~~g~~VvDLGaapG--GW--------Sq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gv 135 (267)
T 3p8z_A 67 LQWFVERN-MVIPEGRVIDLGCGRG--GW--------SYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGK 135 (267)
T ss_dssp HHHHHHTT-SSCCCEEEEEESCTTS--HH--------HHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSC
T ss_pred HHHHHHhc-CCCCCCEEEEcCCCCC--cH--------HHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEecc
Confidence 44444443 6788899999999999 66 775554 66778999999 56889988
Q ss_pred cccccCCCCceeEEEecccccccCChh-hH---HHHHHHHhccccCCeEEEeec
Q psy9773 99 KIENVELPEKVDIIVSEWMGFYLLHES-MI---DSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 99 d~~~~~~~~~fDlIv~~~~~~~l~~~~-~~---~~~l~~l~~~LkpgG~lv~~~ 148 (252)
|+..++. .++|+|+|+..- .-++.. +- ..+|.-+.++|++ |-|++-.
T Consensus 136 Dv~~~~~-~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 136 DVFYLPP-EKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp CGGGCCC-CCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEE
T ss_pred ceeecCC-ccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEE
Confidence 8766644 679999996643 222211 22 2366666899998 6666643
No 271
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.27 E-value=5.2e-06 Score=75.62 Aligned_cols=60 Identities=12% Similarity=0.066 Sum_probs=52.1
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccCCC-CceeEEEec
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVELP-EKVDIIVSE 115 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~~-~~fDlIv~~ 115 (252)
..+|.+||||||++| -+ +..++++|. +|+|||. .++.++++|...+.++ ++||+|+|.
T Consensus 209 l~~G~~vlDLGAaPG--GW--------T~~l~~rg~-~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsD 277 (375)
T 4auk_A 209 LANGMWAVDLGACPG--GW--------TYQLVKRNM-WVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCD 277 (375)
T ss_dssp SCTTCEEEEETCTTC--HH--------HHHHHHTTC-EEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEEC
T ss_pred CCCCCEEEEeCcCCC--HH--------HHHHHHCCC-EEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEc
Confidence 578999999999999 66 778888874 7999998 6899999999988766 689999997
Q ss_pred cc
Q psy9773 116 WM 117 (252)
Q Consensus 116 ~~ 117 (252)
++
T Consensus 278 m~ 279 (375)
T 4auk_A 278 MV 279 (375)
T ss_dssp CS
T ss_pred CC
Confidence 75
No 272
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.25 E-value=2.2e-06 Score=78.57 Aligned_cols=57 Identities=14% Similarity=0.086 Sum_probs=41.9
Q ss_pred EEEEcccccc---CCC-CceeEEEecccccccCChh------------------------------------hHHHHHHH
Q psy9773 94 EVIQNKIENV---ELP-EKVDIIVSEWMGFYLLHES------------------------------------MIDSVIFA 133 (252)
Q Consensus 94 ~~~~~d~~~~---~~~-~~fDlIv~~~~~~~l~~~~------------------------------------~~~~~l~~ 133 (252)
-|+.+....+ .+| +++|+|+++.++|++...+ |+..+|..
T Consensus 131 ~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~ 210 (384)
T 2efj_A 131 CLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRI 210 (384)
T ss_dssp EEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4555544443 445 8999999999999986543 23345788
Q ss_pred HhccccCCeEEEeeccc
Q psy9773 134 RDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 134 l~~~LkpgG~lv~~~~~ 150 (252)
..+.|+|||+|++....
T Consensus 211 Ra~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 211 HSEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHHEEEEEEEEEEEEC
T ss_pred HHHHhccCCeEEEEEec
Confidence 89999999999998765
No 273
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.23 E-value=8.5e-07 Score=84.79 Aligned_cols=98 Identities=9% Similarity=-0.133 Sum_probs=64.6
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHH--HhhcC---------------CCcEEEeeC-----------------C
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSF--CTKVH---------------PLDHYAPQY-----------------L 91 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~--~a~~g---------------~~~v~gvD~-----------------~ 91 (252)
...++.+|||.|||||+.++ ... +...+ ..+++|+|+ .
T Consensus 166 ~p~~~~~VlDPaCGSG~fLi--------~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~ 237 (541)
T 2ar0_A 166 KPQPREVVQDPAAGTAGFLI--------EADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIE 237 (541)
T ss_dssp CCCTTCCEEETTCTTTHHHH--------HHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCC
T ss_pred ccCCCCeEecCCcccchHHH--------HHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCC
Confidence 44567899999999994443 111 11111 136999999 2
Q ss_pred c-----eEEEEccccccCC-C-CceeEEEecccccccCC-----------hhhHHHHHHHHhccccCCeEEEeecccc
Q psy9773 92 I-----LEVIQNKIENVEL-P-EKVDIIVSEWMGFYLLH-----------ESMIDSVIFARDKFLKPEGVMYPYKCIL 151 (252)
Q Consensus 92 ~-----i~~~~~d~~~~~~-~-~~fDlIv~~~~~~~l~~-----------~~~~~~~l~~l~~~LkpgG~lv~~~~~~ 151 (252)
. +.+.++|....+. + ++||+|++++....... ......++..+.++|+|||++.+..+..
T Consensus 238 ~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 238 GNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp CBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred ccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 2 6788888765432 2 68999999775332211 1123367888899999999998877643
No 274
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.21 E-value=4.2e-06 Score=73.80 Aligned_cols=102 Identities=12% Similarity=0.036 Sum_probs=64.4
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeCC---------------ceEEEEcc
Q psy9773 36 AYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQYL---------------ILEVIQNK 99 (252)
Q Consensus 36 ~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~~---------------~i~~~~~d 99 (252)
.+..+... ..+.++.+||||||++| -+ +..+++ .++..|+|+|+. ++.....+
T Consensus 69 KL~ei~ek-~l~~~g~~vlDLGaaPG--gW--------sqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~ 137 (300)
T 3eld_A 69 KIRWLHER-GYLRITGRVLDLGCGRG--GW--------SYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDK 137 (300)
T ss_dssp HHHHHHHH-TSCCCCEEEEEETCTTC--HH--------HHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECS
T ss_pred HHHHHHHh-CCCCCCCEEEEcCCCCC--HH--------HHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecC
Confidence 34444444 55678899999999999 66 777775 455678888881 11222222
Q ss_pred ccccCCC-CceeEEEecccccccCCh-h---hHHHHHHHHhccccCC-eEEEeecc
Q psy9773 100 IENVELP-EKVDIIVSEWMGFYLLHE-S---MIDSVIFARDKFLKPE-GVMYPYKC 149 (252)
Q Consensus 100 ~~~~~~~-~~fDlIv~~~~~~~l~~~-~---~~~~~l~~l~~~Lkpg-G~lv~~~~ 149 (252)
+.-..++ .++|+|+|+.+.+ .... . ....+|.-+.++|+|| |.|++-..
T Consensus 138 ~di~~l~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF 192 (300)
T 3eld_A 138 SNVFTMPTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVL 192 (300)
T ss_dssp CCTTTSCCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEES
T ss_pred ceeeecCCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEec
Confidence 2212222 6899999976544 1111 1 1134467778999999 99998653
No 275
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.20 E-value=5.5e-06 Score=71.43 Aligned_cols=65 Identities=28% Similarity=0.354 Sum_probs=49.1
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCCCC
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVELPE 107 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~~~ 107 (252)
+.......++.+|||+|||+| .+ +..++..++.+|+|+|+ .+++++++|+..++++.
T Consensus 23 iv~~~~~~~~~~VLDiG~G~G--~l--------t~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 23 IAEELNIEEGNTVVEVGGGTG--NL--------TKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHTTCCTTCEEEEEESCHH--HH--------HHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGG
T ss_pred HHHhcCCCCcCEEEEEcCchH--HH--------HHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhH
Confidence 333345678899999999999 66 77777776678999999 25799999999987762
Q ss_pred ---ceeEEEecc
Q psy9773 108 ---KVDIIVSEW 116 (252)
Q Consensus 108 ---~fDlIv~~~ 116 (252)
.+ .|+++.
T Consensus 93 ~~~~~-~vv~Nl 103 (249)
T 3ftd_A 93 LGKEL-KVVGNL 103 (249)
T ss_dssp SCSSE-EEEEEC
T ss_pred ccCCc-EEEEEC
Confidence 33 555544
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.20 E-value=3.9e-06 Score=82.57 Aligned_cols=105 Identities=15% Similarity=0.054 Sum_probs=69.0
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc----------------------------------
Q psy9773 35 EAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV---------------------------------- 80 (252)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~---------------------------------- 80 (252)
..+..++.......++.+|||++|||| ++ .+.++..
T Consensus 176 e~LAa~ll~~~~~~~~~~llDP~CGSG--t~--------lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~ 245 (703)
T 3v97_A 176 ETLAAAIVMRSGWQPGTPLLDPMCGSG--TL--------LIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQ 245 (703)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTS--HH--------HHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCeEEecCCCCc--HH--------HHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHH
Confidence 345556665566678889999999999 65 3332221
Q ss_pred ---------CCCcEEEeeC------------------CceEEEEccccccCCC---CceeEEEecccc-cccCChhhHHH
Q psy9773 81 ---------HPLDHYAPQY------------------LILEVIQNKIENVELP---EKVDIIVSEWMG-FYLLHESMIDS 129 (252)
Q Consensus 81 ---------g~~~v~gvD~------------------~~i~~~~~d~~~~~~~---~~fDlIv~~~~~-~~l~~~~~~~~ 129 (252)
...+++|+|+ ..+.|.++|+.++..+ ++||+|++++-. ..+.....+..
T Consensus 246 ~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ 325 (703)
T 3v97_A 246 TRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIA 325 (703)
T ss_dssp HHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHH
T ss_pred HHhhhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHH
Confidence 1146999999 3589999999988544 389999997642 12222234444
Q ss_pred HHHHH---hccccCCeEEEeecc
Q psy9773 130 VIFAR---DKFLKPEGVMYPYKC 149 (252)
Q Consensus 130 ~l~~l---~~~LkpgG~lv~~~~ 149 (252)
+...+ .+.+.|||.+++.++
T Consensus 326 ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 326 LHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHHhhCCCCeEEEEeC
Confidence 44444 445568999988664
No 277
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.19 E-value=4.7e-06 Score=73.78 Aligned_cols=96 Identities=16% Similarity=0.129 Sum_probs=69.9
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC----------------------CceEEEEccccccC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY----------------------LILEVIQNKIENVE 104 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~----------------------~~i~~~~~d~~~~~ 104 (252)
...++||-||.|.| .. ...+.+. +..+|+.+|+ ++++++.+|...+-
T Consensus 82 p~pk~VLIiGgGdG--~~--------~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l 151 (294)
T 3o4f_A 82 GHAKHVLIIGGGDG--AM--------LREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV 151 (294)
T ss_dssp SCCCEEEEESCTTS--HH--------HHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTT
T ss_pred CCCCeEEEECCCch--HH--------HHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHH
Confidence 55689999999999 54 4555554 3468999999 68999999998885
Q ss_pred CC--CceeEEEecccccccCCh-hhHHHHHHHHhccccCCeEEEeecccccc
Q psy9773 105 LP--EKVDIIVSEWMGFYLLHE-SMIDSVIFARDKFLKPEGVMYPYKCILHS 153 (252)
Q Consensus 105 ~~--~~fDlIv~~~~~~~l~~~-~~~~~~l~~l~~~LkpgG~lv~~~~~~~~ 153 (252)
.. ++||+|+........+.. ---..++..+++.|+|||+++....+.+.
T Consensus 152 ~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~ 203 (294)
T 3o4f_A 152 NQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFL 203 (294)
T ss_dssp SCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSS
T ss_pred hhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCccc
Confidence 43 789999985432111111 02246888999999999999998765443
No 278
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.18 E-value=7.7e-06 Score=72.08 Aligned_cols=101 Identities=11% Similarity=-0.019 Sum_probs=68.6
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC----------------CceEEEEc
Q psy9773 36 AYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------------LILEVIQN 98 (252)
Q Consensus 36 ~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------------~~i~~~~~ 98 (252)
.+..+..+ ..+.++.+||||||++| -+ +.+++. .|+..|+|+|+ ..+.+..+
T Consensus 82 KL~ei~~~-~~l~~~~~VlDLGaapG--Gw--------sq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~ 150 (321)
T 3lkz_A 82 KLRWLVER-RFLEPVGKVIDLGCGRG--GW--------CYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSG 150 (321)
T ss_dssp HHHHHHHT-TSCCCCEEEEEETCTTC--HH--------HHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECS
T ss_pred HHHHHHHh-cCCCCCCEEEEeCCCCC--cH--------HHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEec
Confidence 34444444 56778889999999999 66 665554 66678999999 23667776
Q ss_pred -cccccCCCCceeEEEecccccccCChh-hH---HHHHHHHhccccCC-eEEEeecc
Q psy9773 99 -KIENVELPEKVDIIVSEWMGFYLLHES-MI---DSVIFARDKFLKPE-GVMYPYKC 149 (252)
Q Consensus 99 -d~~~~~~~~~fDlIv~~~~~~~l~~~~-~~---~~~l~~l~~~Lkpg-G~lv~~~~ 149 (252)
|+..++. .++|+|+|+.. ..-++.. +- ..+|.-+.++|++| |-|++-..
T Consensus 151 ~Dv~~l~~-~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl 205 (321)
T 3lkz_A 151 VDVFYRPS-ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVL 205 (321)
T ss_dssp CCTTSSCC-CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred cCHhhCCC-CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEc
Confidence 7766654 67999999654 3333221 22 23566667889888 88877543
No 279
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.13 E-value=3.6e-06 Score=72.90 Aligned_cols=99 Identities=10% Similarity=-0.013 Sum_probs=63.2
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CC----CcEEEee--C---C----ce---EEEEc-
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HP----LDHYAPQ--Y---L----IL---EVIQN- 98 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~----~~v~gvD--~---~----~i---~~~~~- 98 (252)
+..+..+ ..+.++.+||||||+.| -+ +..++.. +. ..++|+| + . .+ .|+++
T Consensus 62 L~EIdeK-~likpg~~VVDLGaAPG--GW--------SQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~ 130 (269)
T 2px2_A 62 LRWLVER-RFVQPIGKVVDLGCGRG--GW--------SYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGV 130 (269)
T ss_dssp HHHHHHT-TSCCCCEEEEEETCTTS--HH--------HHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSC
T ss_pred HHHHHHc-CCCCCCCEEEEcCCCCC--HH--------HHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccC
Confidence 3333333 46788999999999999 77 8888775 11 2356667 3 1 22 34446
Q ss_pred cccccCCCCceeEEEecccccccCChh-hHH---HHHHHHhccccCCe-EEEeec
Q psy9773 99 KIENVELPEKVDIIVSEWMGFYLLHES-MID---SVIFARDKFLKPEG-VMYPYK 148 (252)
Q Consensus 99 d~~~~~~~~~fDlIv~~~~~~~l~~~~-~~~---~~l~~l~~~LkpgG-~lv~~~ 148 (252)
|+..+. +.++|+|+|..+.. ..+.. |-. .+|.-+.++|+||| .|++-.
T Consensus 131 Df~~~~-~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 131 DVFYKP-SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp CGGGSC-CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CccCCC-CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEE
Confidence 988754 35799999977543 21111 111 25666678999999 887744
No 280
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.10 E-value=1.4e-05 Score=70.41 Aligned_cols=106 Identities=11% Similarity=0.045 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHh-CCCCCCCCEEEEEcC------CcCchhhhhccCccchHHHhhcCCC--cEEEeeC-----CceEEE
Q psy9773 31 TVRNEAYRAAICD-NPNIFAGKTVLDVGT------GTGKSILLQGHGVDHHSFCTKVHPL--DHYAPQY-----LILEVI 96 (252)
Q Consensus 31 ~~~~~~~~~~l~~-~~~~~~~~~VLDlGc------GtG~~~ll~~~~v~~s~~~a~~g~~--~v~gvD~-----~~i~~~ 96 (252)
...+..+...|.. ..-.+.|.+|||+|| ..| +..+++.++. .|+++|+ ..-.++
T Consensus 90 v~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APG------------S~VLr~~~p~g~~VVavDL~~~~sda~~~I 157 (344)
T 3r24_A 90 VAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPG------------TAVLRQWLPTGTLLVDSDLNDFVSDADSTL 157 (344)
T ss_dssp HHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHH------------HHHHHHHSCTTCEEEEEESSCCBCSSSEEE
T ss_pred HHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCc------------HHHHHHhCCCCcEEEEeeCcccccCCCeEE
Confidence 3456666666643 234567899999996 556 4344444443 7999999 222569
Q ss_pred EccccccCCCCceeEEEecccccccCC--h------hhHHHHHHHHhccccCCeEEEeec
Q psy9773 97 QNKIENVELPEKVDIIVSEWMGFYLLH--E------SMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 97 ~~d~~~~~~~~~fDlIv~~~~~~~l~~--~------~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
++|+......++||+|+|.++....-+ . .-.+.++.-+.+.|+|||.|++-.
T Consensus 158 qGD~~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV 217 (344)
T 3r24_A 158 IGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 217 (344)
T ss_dssp ESCGGGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EccccccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE
Confidence 999887766688999999655322111 1 125566666788999999999764
No 281
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.09 E-value=9.1e-06 Score=64.72 Aligned_cols=93 Identities=15% Similarity=0.204 Sum_probs=62.6
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCcCchh-hhhccCccchHHHhh-cCCCcEEEeeC--CceEEEEccccccCCC--Cce
Q psy9773 36 AYRAAICDNPNIFAGKTVLDVGTGTGKSI-LLQGHGVDHHSFCTK-VHPLDHYAPQY--LILEVIQNKIENVELP--EKV 109 (252)
Q Consensus 36 ~~~~~l~~~~~~~~~~~VLDlGcGtG~~~-ll~~~~v~~s~~~a~-~g~~~v~gvD~--~~i~~~~~d~~~~~~~--~~f 109 (252)
.+.+.|.+ ...++.+|||||||+| . . +..+++ .| ..|+++|+ ..+.+++.|+.+.... ..|
T Consensus 24 ~LaeYI~~--~~~~~~rVlEVG~G~g--~~v--------A~~La~~~g-~~V~atDInp~Av~~v~dDiF~P~~~~Y~~~ 90 (153)
T 2k4m_A 24 DLAVYIIR--CSGPGTRVVEVGAGRF--LYV--------SDYIRKHSK-VDLVLTDIKPSHGGIVRDDITSPRMEIYRGA 90 (153)
T ss_dssp HHHHHHHH--HSCSSSEEEEETCTTC--CHH--------HHHHHHHSC-CEEEEECSSCSSTTEECCCSSSCCHHHHTTE
T ss_pred HHHHHHHh--cCCCCCcEEEEccCCC--hHH--------HHHHHHhCC-CeEEEEECCccccceEEccCCCCcccccCCc
Confidence 34455543 2355689999999999 4 3 567775 66 46999999 4455999999885544 589
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEee
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~ 147 (252)
|+|.+ +...+++...+.++.+.+.-+-++.+-
T Consensus 91 DLIYs------irPP~El~~~i~~lA~~v~adliI~pL 122 (153)
T 2k4m_A 91 ALIYS------IRPPAEIHSSLMRVADAVGARLIIKPL 122 (153)
T ss_dssp EEEEE------ESCCTTTHHHHHHHHHHHTCEEEEECB
T ss_pred CEEEE------cCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 99977 333456666676666655444444433
No 282
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.02 E-value=5.6e-06 Score=72.71 Aligned_cols=52 Identities=15% Similarity=0.163 Sum_probs=41.1
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCc---EEEeeC-------------CceEEEEccccccCCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLD---HYAPQY-------------LILEVIQNKIENVELP 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~---v~gvD~-------------~~i~~~~~d~~~~~~~ 106 (252)
....++.+|||||||+| .+ +..++..+..+ |+|+|+ .+++++++|+..++++
T Consensus 38 ~~~~~~~~VLEIG~G~G--~l--------t~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 38 IRPERGERMVEIGPGLG--AL--------TGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFG 105 (279)
T ss_dssp HCCCTTCEEEEECCTTS--TT--------HHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGG
T ss_pred cCCCCcCEEEEEccccH--HH--------HHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChh
Confidence 35677899999999999 66 66666654322 999999 3689999999998765
No 283
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.98 E-value=3.2e-06 Score=73.33 Aligned_cols=62 Identities=21% Similarity=0.040 Sum_probs=48.7
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------------------CceEEEEcccc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------------------LILEVIQNKIE 101 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------------------~~i~~~~~d~~ 101 (252)
..++.+|||+|||+| .+ ++.++..+ .+|+|+|+ .+++++++|+.
T Consensus 81 ~~~~~~VLDlgcG~G--~~--------a~~lA~~g-~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~ 149 (258)
T 2r6z_A 81 HTAHPTVWDATAGLG--RD--------SFVLASLG-LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAA 149 (258)
T ss_dssp GGGCCCEEETTCTTC--HH--------HHHHHHTT-CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHH
T ss_pred cCCcCeEEEeeCccC--HH--------HHHHHHhC-CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHH
Confidence 456789999999999 76 77777776 47999998 23899999998
Q ss_pred ccC--CC---CceeEEEeccccc
Q psy9773 102 NVE--LP---EKVDIIVSEWMGF 119 (252)
Q Consensus 102 ~~~--~~---~~fDlIv~~~~~~ 119 (252)
.+. ++ ++||+|+++++..
T Consensus 150 ~~l~~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 150 EQMPALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHHHHHHHHCCCSEEEECCCC-
T ss_pred HHHHhhhccCCCccEEEECCCCC
Confidence 752 23 5899999987643
No 284
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.96 E-value=5.8e-05 Score=72.14 Aligned_cols=97 Identities=14% Similarity=-0.006 Sum_probs=64.1
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHh--hcCCCcEEEeeC-------------------CceEEEEcccccc--
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCT--KVHPLDHYAPQY-------------------LILEVIQNKIENV-- 103 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a--~~g~~~v~gvD~-------------------~~i~~~~~d~~~~-- 103 (252)
..++.+|||.+||||+.++ ...-. ..+..+++|+|+ .++.+.++|....
T Consensus 219 ~~~~~~VlDPaCGSG~fLi--------~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~ 290 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLL--------NAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDW 290 (542)
T ss_dssp TCTTCEEEETTCTTSTTGG--------GHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCS
T ss_pred CCCCCEEeecccchhHHHH--------HHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccc
Confidence 3467899999999994443 22111 112357999999 2457889998766
Q ss_pred CC--CCceeEEEecccccccCC--------------------hh-hHHHHHHHHhcccc-CCeEEEeeccccc
Q psy9773 104 EL--PEKVDIIVSEWMGFYLLH--------------------ES-MIDSVIFARDKFLK-PEGVMYPYKCILH 152 (252)
Q Consensus 104 ~~--~~~fDlIv~~~~~~~l~~--------------------~~-~~~~~l~~l~~~Lk-pgG~lv~~~~~~~ 152 (252)
+. ..+||+|++++-.. ..+ .. .-..++..+.+.|+ |||++.+..+..+
T Consensus 291 p~~~~~~fD~IvaNPPf~-~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~ 362 (542)
T 3lkd_A 291 PTQEPTNFDGVLMNPPYS-AKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGV 362 (542)
T ss_dssp CCSSCCCBSEEEECCCTT-CCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHH
T ss_pred cccccccccEEEecCCcC-CccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchH
Confidence 22 26899999965432 111 00 01247888899999 9999987776543
No 285
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.91 E-value=3.9e-05 Score=64.27 Aligned_cols=82 Identities=7% Similarity=0.052 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------C-----ceEEEEcccccc----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------L-----ILEVIQNKIENV---- 103 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~-----~i~~~~~d~~~~---- 103 (252)
...++||++|||.. + +.+++....+|+++|. . +|+++.+|+...
T Consensus 29 ~~a~~VLEiGtGyS--T----------l~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg 96 (202)
T 3cvo_A 29 EEAEVILEYGSGGS--T----------VVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWG 96 (202)
T ss_dssp HHCSEEEEESCSHH--H----------HHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGG
T ss_pred hCCCEEEEECchHH--H----------HHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhccc
Confidence 35679999999753 4 3445432368999998 2 588999996542
Q ss_pred -----------C--------CC--CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 -----------E--------LP--EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 -----------~--------~~--~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+ .. ++||+|+...- .....+..+.++|+|||++++.+.
T Consensus 97 ~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~--------k~~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 97 HPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR--------FRVGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp CBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS--------SHHHHHHHHHHHCSSCEEEEETTG
T ss_pred ccccchhhhhHHHHhhhhhccccCCCCCEEEEeCC--------CchhHHHHHHHhcCCCeEEEEeCC
Confidence 1 22 68999988542 112445556699999999988764
No 286
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.91 E-value=7.2e-06 Score=70.91 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=44.4
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCc--EEEeeC---------------CceEEEEccccccCCCC-
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLD--HYAPQY---------------LILEVIQNKIENVELPE- 107 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~--v~gvD~---------------~~i~~~~~d~~~~~~~~- 107 (252)
...++.+|||+|||+| .+ +. ++. + .+ |+|+|+ .+++++++|+..++++.
T Consensus 18 ~~~~~~~VLEIG~G~G--~l--------t~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 18 NPQKGQAMVEIGPGLA--AL--------TE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp CCCTTCCEEEECCTTT--TT--------HH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHH
T ss_pred CCCCcCEEEEECCCCc--HH--------HH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHh
Confidence 4567889999999999 77 66 543 3 46 999999 37899999999886542
Q ss_pred -----ceeEEEecc
Q psy9773 108 -----KVDIIVSEW 116 (252)
Q Consensus 108 -----~fDlIv~~~ 116 (252)
..+.|+++.
T Consensus 85 ~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 85 AEKMGQPLRVFGNL 98 (252)
T ss_dssp HHHHTSCEEEEEEC
T ss_pred hcccCCceEEEECC
Confidence 346777754
No 287
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.87 E-value=1.1e-05 Score=77.23 Aligned_cols=92 Identities=15% Similarity=0.048 Sum_probs=56.9
Q ss_pred EEEEEcCCcCchhhhhccCccchHH--Hhh----cC--------CCcEEEeeC------------------CceEEEEcc
Q psy9773 52 TVLDVGTGTGKSILLQGHGVDHHSF--CTK----VH--------PLDHYAPQY------------------LILEVIQNK 99 (252)
Q Consensus 52 ~VLDlGcGtG~~~ll~~~~v~~s~~--~a~----~g--------~~~v~gvD~------------------~~i~~~~~d 99 (252)
+|||.+||||+.++ ... +.. .+ ..+++|+|+ .++.+.++|
T Consensus 247 ~VlDPaCGSG~fLi--------~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gD 318 (544)
T 3khk_A 247 RVYDPAMGSGGFFV--------SSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNAD 318 (544)
T ss_dssp EEEESSCTTCHHHH--------HHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCC
T ss_pred eEeCcccCcCcHHH--------HHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccc
Confidence 99999999994443 111 000 00 236999999 223336667
Q ss_pred ccccCC-C-CceeEEEeccccccc-------------------------CChh-hHHHHHHHHhccccCCeEEEeecccc
Q psy9773 100 IENVEL-P-EKVDIIVSEWMGFYL-------------------------LHES-MIDSVIFARDKFLKPEGVMYPYKCIL 151 (252)
Q Consensus 100 ~~~~~~-~-~~fDlIv~~~~~~~l-------------------------~~~~-~~~~~l~~l~~~LkpgG~lv~~~~~~ 151 (252)
....+. + .+||+|++++-...- +... .-..++..+.+.|+|||++.+..+..
T Consensus 319 tL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 319 SFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred hhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 654432 2 689999997643321 0000 11257888899999999998877653
No 288
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.86 E-value=1.6e-05 Score=69.04 Aligned_cols=63 Identities=14% Similarity=0.024 Sum_probs=49.2
Q ss_pred CCCCC--CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC--------------------------ceEEEE
Q psy9773 46 NIFAG--KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL--------------------------ILEVIQ 97 (252)
Q Consensus 46 ~~~~~--~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~--------------------------~i~~~~ 97 (252)
...++ .+|||+|||+| .. ++.+++.|+ +|+++|+. ++++++
T Consensus 83 ~l~~g~~~~VLDl~~G~G--~d--------al~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 83 GIKGDYLPDVVDATAGLG--RD--------AFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp TCBTTBCCCEEETTCTTC--HH--------HHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred cccCCCCCEEEEcCCcCC--HH--------HHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 34566 89999999999 66 777787775 69999991 378999
Q ss_pred ccccccC--CCCceeEEEeccccc
Q psy9773 98 NKIENVE--LPEKVDIIVSEWMGF 119 (252)
Q Consensus 98 ~d~~~~~--~~~~fDlIv~~~~~~ 119 (252)
+|..++. .+.+||+|+++++..
T Consensus 152 ~D~~~~L~~~~~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 152 ASSLTALTDITPRPQVVYLDPMFP 175 (258)
T ss_dssp SCHHHHSTTCSSCCSEEEECCCCC
T ss_pred CCHHHHHHhCcccCCEEEEcCCCC
Confidence 9988753 235799999988753
No 289
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.84 E-value=0.0001 Score=73.22 Aligned_cols=97 Identities=9% Similarity=0.033 Sum_probs=61.0
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-C---CCcEEEeeCCc-----------------------eEEEEcc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-H---PLDHYAPQYLI-----------------------LEVIQNK 99 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g---~~~v~gvD~~~-----------------------i~~~~~d 99 (252)
..++.+|||.|||+| .+ ...++.. + ..+++|+|+.. ..+...|
T Consensus 319 l~~g~rVLDPaCGSG--~F--------LIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD 388 (878)
T 3s1s_A 319 LTEDEVISDPAAGSG--NL--------LATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGED 388 (878)
T ss_dssp CCTTCEEEETTCTTS--HH--------HHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCC
T ss_pred CCCCCEEEECCCCcc--HH--------HHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecc
Confidence 356789999999999 44 3333332 1 24689999810 1344444
Q ss_pred ccccCC--CCceeEEEecccccccC-Ch-------------------------hhHHHHHHHHhccccCCeEEEeecccc
Q psy9773 100 IENVEL--PEKVDIIVSEWMGFYLL-HE-------------------------SMIDSVIFARDKFLKPEGVMYPYKCIL 151 (252)
Q Consensus 100 ~~~~~~--~~~fDlIv~~~~~~~l~-~~-------------------------~~~~~~l~~l~~~LkpgG~lv~~~~~~ 151 (252)
+..... .+.||+|++++-..... .. .....++..+.++|+|||++.+..+..
T Consensus 389 ~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 389 VCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp GGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred hhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 444321 26899999977531110 00 013356778889999999999988765
Q ss_pred cc
Q psy9773 152 HS 153 (252)
Q Consensus 152 ~~ 153 (252)
+.
T Consensus 469 ~L 470 (878)
T 3s1s_A 469 YL 470 (878)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 290
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.79 E-value=1.8e-05 Score=70.29 Aligned_cols=61 Identities=16% Similarity=0.094 Sum_probs=46.8
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcC-CCcEEEeeC----------------CceEEEEccccccCC--C
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH-PLDHYAPQY----------------LILEVIQNKIENVEL--P 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g-~~~v~gvD~----------------~~i~~~~~d~~~~~~--~ 106 (252)
...++.+|||+|||+| .+ +..++... ..+|+|+|+ .++.++++|+..++. +
T Consensus 23 ~~~~g~~vLD~g~G~G--~~--------s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEG--GH--------SRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLK 92 (301)
T ss_dssp CCCTTCEEEETTCTTS--HH--------HHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHH
T ss_pred CCCCCCEEEEEeCCcC--HH--------HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHH
Confidence 3567899999999999 55 55666542 368999999 378999999988742 1
Q ss_pred ----CceeEEEecc
Q psy9773 107 ----EKVDIIVSEW 116 (252)
Q Consensus 107 ----~~fDlIv~~~ 116 (252)
.+||+|+++.
T Consensus 93 ~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 93 TLGIEKVDGILMDL 106 (301)
T ss_dssp HTTCSCEEEEEEEC
T ss_pred hcCCCCCCEEEEcC
Confidence 4799999855
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.71 E-value=5e-05 Score=69.36 Aligned_cols=92 Identities=17% Similarity=0.189 Sum_probs=64.9
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------------------CceEEEEcccccc
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------------------LILEVIQNKIENV 103 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------------------~~i~~~~~d~~~~ 103 (252)
++++||=+|.|.| .. ...+.+.+..+|+.+|+ .+++++.+|...+
T Consensus 205 ~pkrVLIIGgGdG--~~--------~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~f 274 (381)
T 3c6k_A 205 TGKDVLILGGGDG--GI--------LCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV 274 (381)
T ss_dssp TTCEEEEEECTTC--HH--------HHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH
T ss_pred CCCeEEEECCCcH--HH--------HHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHH
Confidence 4689999999999 54 45566666678999999 3477888888765
Q ss_pred CC-----CCceeEEEecccccccC------Ch-hhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 104 EL-----PEKVDIIVSEWMGFYLL------HE-SMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 104 ~~-----~~~fDlIv~~~~~~~l~------~~-~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
-. .++||+||......... .. .--..++..++++|+|||+++....+
T Consensus 275 l~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s 333 (381)
T 3c6k_A 275 LKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 333 (381)
T ss_dssp HHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred HHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 31 25799999854211110 01 12356788899999999999987654
No 292
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.68 E-value=2.7e-05 Score=71.99 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------------C-----ceEEEEcccccc-CC-C-
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------------L-----ILEVIQNKIENV-EL-P- 106 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------------~-----~i~~~~~d~~~~-~~-~- 106 (252)
+|.+|||+|||+| .. +..+++.+ .+|+++|+ . +++++++|+.++ +. +
T Consensus 93 ~g~~VLDLgcG~G--~~--------al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~ 161 (410)
T 3ll7_A 93 EGTKVVDLTGGLG--ID--------FIALMSKA-SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKT 161 (410)
T ss_dssp TTCEEEESSCSSS--HH--------HHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHH
T ss_pred CCCEEEEeCCCch--HH--------HHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccC
Confidence 4899999999999 66 66777765 58999999 2 488999999885 22 1
Q ss_pred CceeEEEeccc
Q psy9773 107 EKVDIIVSEWM 117 (252)
Q Consensus 107 ~~fDlIv~~~~ 117 (252)
++||+|++++.
T Consensus 162 ~~fDvV~lDPP 172 (410)
T 3ll7_A 162 FHPDYIYVDPA 172 (410)
T ss_dssp HCCSEEEECCE
T ss_pred CCceEEEECCC
Confidence 57999999654
No 293
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.65 E-value=5.6e-05 Score=68.66 Aligned_cols=98 Identities=17% Similarity=0.084 Sum_probs=66.9
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC-----------------------CceEEEEcccc
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY-----------------------LILEVIQNKIE 101 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~-----------------------~~i~~~~~d~~ 101 (252)
...+|.+|||++||.|+=++ .++..+. ..++++|+ .++.+...|..
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~----------~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~ 214 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTL----------ALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGR 214 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHH----------HHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGG
T ss_pred CCCCCCEEEEecCCccHHHH----------HHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchh
Confidence 46789999999999995443 4444332 46999998 25677888887
Q ss_pred ccC--CCCceeEEEeccc-cc---ccC-Chh---------h-------HHHHHHHHhccccCCeEEEeecccccc
Q psy9773 102 NVE--LPEKVDIIVSEWM-GF---YLL-HES---------M-------IDSVIFARDKFLKPEGVMYPYKCILHS 153 (252)
Q Consensus 102 ~~~--~~~~fDlIv~~~~-~~---~l~-~~~---------~-------~~~~l~~l~~~LkpgG~lv~~~~~~~~ 153 (252)
.+. .++.||.|++..- +. ... ..+ + -..+|..+.++|||||+|+-+++++..
T Consensus 215 ~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 215 KWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp GHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred hcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 764 2378999998321 11 110 000 1 136788888999999999999887543
No 294
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.63 E-value=5.6e-05 Score=65.52 Aligned_cols=56 Identities=16% Similarity=0.267 Sum_probs=36.4
Q ss_pred ceEEEEcccccc-C-CCC----ceeEEEecccccccCChh-hHHHHHHHHhccccCCeEEEeec
Q psy9773 92 ILEVIQNKIENV-E-LPE----KVDIIVSEWMGFYLLHES-MIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 92 ~i~~~~~d~~~~-~-~~~----~fDlIv~~~~~~~l~~~~-~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+++++.+|+.+. + .+. .||+|+.......- +.. --..+|..+.++|+|||+|+..+
T Consensus 151 ~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~-~p~lw~~~~l~~l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 151 TLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLATFT 213 (257)
T ss_dssp EEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTT-CGGGCCHHHHHHHHHHEEEEEEEEESC
T ss_pred EEEEEECcHHHHHhhcccccCCeEEEEEECCCCccc-ChhhcCHHHHHHHHHHcCCCcEEEEEe
Confidence 355778888764 2 122 79999985421110 111 12468999999999999998644
No 295
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.60 E-value=0.00027 Score=62.07 Aligned_cols=91 Identities=4% Similarity=-0.031 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcC--CCcEEEeeC-----------------------------------
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVH--PLDHYAPQY----------------------------------- 90 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g--~~~v~gvD~----------------------------------- 90 (252)
....+||++|+.+|.+.+ +++..+...+ ..+++++|.
T Consensus 105 ~~pg~IlEiGv~~G~Sai------~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar 178 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACI------LMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVR 178 (282)
T ss_dssp TCCCEEEEECCTTSHHHH------HHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHH
T ss_pred CCCCcEEEeecCchHHHH------HHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHH
Confidence 456799999999997665 1111121111 357888883
Q ss_pred ----------CceEEEEccccccCC--C-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 91 ----------LILEVIQNKIENVEL--P-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 91 ----------~~i~~~~~d~~~~~~--~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+|+++.+++.+.-. + ++||+|+...- .-......|..+.++|+|||++++...
T Consensus 179 ~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD-----~y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 179 RNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD-----LYESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp HHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC-----SHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred HHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC-----ccccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 358899999876522 2 68999988542 112355788999999999999999886
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.25 E-value=0.0009 Score=63.66 Aligned_cols=113 Identities=12% Similarity=-0.029 Sum_probs=60.4
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhh-----hhccCccchHHHhhcCCCcEEEeeC-----------------CceE
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSIL-----LQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILE 94 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~l-----l~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~ 94 (252)
+.+.|.......++.+|+|.+||||+.++ |...+......-... ...++|+|+ ....
T Consensus 205 Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~-~~~i~G~E~~~~~~~la~mNl~lhg~~~~~ 283 (530)
T 3ufb_A 205 VVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQ-ESSIFGGEAKSLPYLLVQMNLLLHGLEYPR 283 (530)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHH-TCCEEEECCSHHHHHHHHHHHHHHTCSCCE
T ss_pred HHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHh-hhhhhhhhccHHHHHHHHHHHHhcCCcccc
Confidence 33344433345677899999999995443 000000000000001 135899998 2345
Q ss_pred EEEccccccCCC-----CceeEEEecccccccCC-------------hhhHHHHHHHHhccc-------cCCeEEEeecc
Q psy9773 95 VIQNKIENVELP-----EKVDIIVSEWMGFYLLH-------------ESMIDSVIFARDKFL-------KPEGVMYPYKC 149 (252)
Q Consensus 95 ~~~~d~~~~~~~-----~~fDlIv~~~~~~~l~~-------------~~~~~~~l~~l~~~L-------kpgG~lv~~~~ 149 (252)
+..+|....+.. .+||+|++++-...-.. ...-..++..+.+.| +|||++.+..+
T Consensus 284 I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 284 IDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp EECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred ccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 667776554322 47999999775321110 001123444455555 47999988776
Q ss_pred c
Q psy9773 150 I 150 (252)
Q Consensus 150 ~ 150 (252)
.
T Consensus 364 ~ 364 (530)
T 3ufb_A 364 N 364 (530)
T ss_dssp H
T ss_pred c
Confidence 4
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.85 E-value=0.0064 Score=53.16 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
.++.+|||++||+| +. +..++..| .+++|+|+
T Consensus 234 ~~~~~vlD~f~GsG--t~--------~~~a~~~g-~~~~g~e~ 265 (297)
T 2zig_A 234 FVGDVVLDPFAGTG--TT--------LIAAARWG-RRALGVEL 265 (297)
T ss_dssp CTTCEEEETTCTTT--HH--------HHHHHHTT-CEEEEEES
T ss_pred CCCCEEEECCCCCC--HH--------HHHHHHcC-CeEEEEeC
Confidence 67899999999999 77 67777776 57999998
No 298
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.75 E-value=0.0074 Score=52.86 Aligned_cols=98 Identities=12% Similarity=0.011 Sum_probs=68.7
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEcc
Q psy9773 35 EAYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNK 99 (252)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d 99 (252)
..|...+.. ..+..+||+-+||| .+ ++.+.+. ..+++.+|. .++.+++.|
T Consensus 81 ~~yf~~l~~----~n~~~~LDlfaGSG--aL--------giEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D 145 (283)
T 2oo3_A 81 LEYISVIKQ----INLNSTLSYYPGSP--YF--------AINQLRS-QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTD 145 (283)
T ss_dssp HHHHHHHHH----HSSSSSCCEEECHH--HH--------HHHHSCT-TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSC
T ss_pred HHHHHHHHH----hcCCCceeEeCCcH--HH--------HHHHcCC-CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCc
Confidence 345555543 34567999999999 77 7777774 478999999 468889999
Q ss_pred cccc-C---CC-CceeEEEecccccccCChhhHHHHHHHHhc--cccCCeEEEeeccc
Q psy9773 100 IENV-E---LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDK--FLKPEGVMYPYKCI 150 (252)
Q Consensus 100 ~~~~-~---~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~--~LkpgG~lv~~~~~ 150 (252)
.... . .+ .+||+|++.+-... ..+...++..+.+ .+.|+|++++..+-
T Consensus 146 ~~~~L~~l~~~~~~fdLVfiDPPYe~---k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 146 GVSKLNALLPPPEKRGLIFIDPSYER---KEEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp HHHHHHHHCSCTTSCEEEEECCCCCS---TTHHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred HHHHHHHhcCCCCCccEEEECCCCCC---CcHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 6543 1 22 57999999874221 1356666666544 56799999988775
No 299
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=95.73 E-value=0.0096 Score=52.17 Aligned_cols=60 Identities=17% Similarity=0.105 Sum_probs=44.3
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCC-----C-
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVEL-----P- 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~-----~- 106 (252)
...++..+||++||.|+.+. .+++.+ .+|+|+|. .++.++++++.++.. .
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~----------~il~~~-g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g~ 87 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHAR----------GILERG-GRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGV 87 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHH----------HHHHTT-CEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTC
T ss_pred CCCCCCEEEEeCCCCcHHHH----------HHHHCC-CEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcCC
Confidence 35678999999999996554 444443 57999999 268888888887732 1
Q ss_pred CceeEEEecc
Q psy9773 107 EKVDIIVSEW 116 (252)
Q Consensus 107 ~~fDlIv~~~ 116 (252)
+++|.|+++.
T Consensus 88 ~~vDgIL~DL 97 (285)
T 1wg8_A 88 ERVDGILADL 97 (285)
T ss_dssp SCEEEEEEEC
T ss_pred CCcCEEEeCC
Confidence 4688888744
No 300
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.16 E-value=0.057 Score=48.99 Aligned_cols=56 Identities=16% Similarity=0.035 Sum_probs=44.1
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCC---------CCce
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVEL---------PEKV 109 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~---------~~~f 109 (252)
.++|||.||.| .+ ++.+...|...+.++|+ ....++++|+.++.. ...+
T Consensus 3 ~~vidLFsG~G--Gl--------slG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVG--GL--------SLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTS--HH--------HHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcC--HH--------HHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCe
Confidence 58999999999 65 66667778777889999 456788999988742 2579
Q ss_pred eEEEecc
Q psy9773 110 DIIVSEW 116 (252)
Q Consensus 110 DlIv~~~ 116 (252)
|+|+..+
T Consensus 73 D~i~ggp 79 (376)
T 3g7u_A 73 DGIIGGP 79 (376)
T ss_dssp CEEEECC
T ss_pred eEEEecC
Confidence 9999844
No 301
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.93 E-value=0.019 Score=63.79 Aligned_cols=91 Identities=20% Similarity=0.050 Sum_probs=37.6
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHh-h-cC--CCcEEEeeCCc------------eEEEE--cccccc-C-CCC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCT-K-VH--PLDHYAPQYLI------------LEVIQ--NKIENV-E-LPE 107 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a-~-~g--~~~v~gvD~~~------------i~~~~--~d~~~~-~-~~~ 107 (252)
.+..+||++|.|+|+.+. .++.. . .+ ..+++.+|+.. ..+.. .|.... + .+.
T Consensus 1239 ~~~~~ilEigagtg~~t~--------~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~ 1310 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYS--------RIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLG 1310 (2512)
T ss_dssp SSEEEEEEESCSSSCCTT--------THHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC----
T ss_pred CCCceEEEECCCccHHHH--------HHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCC
Confidence 356799999999995443 21111 0 00 12466666621 11111 122221 1 126
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+||+||+..++|.. +++...|.+++++|+|||++++...
T Consensus 1311 ~ydlvia~~vl~~t---~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1311 KADLLVCNCALATL---GDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp -CCEEEEECC-----------------------CCEEEEEEC
T ss_pred ceeEEEEccccccc---ccHHHHHHHHHHhcCCCcEEEEEec
Confidence 79999997775544 6778899999999999999988653
No 302
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.93 E-value=0.083 Score=46.30 Aligned_cols=55 Identities=20% Similarity=0.171 Sum_probs=42.6
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEccccccCCC--CceeEEEec
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENVELP--EKVDIIVSE 115 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~~~~--~~fDlIv~~ 115 (252)
.+||||-||.| -+ ++-+.+.|..-+.++|+ ..-.++.+|+.++... ..+|+|+..
T Consensus 1 mkvidLFsG~G--G~--------~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAG--GL--------DLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTC--HH--------HHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECC
T ss_pred CeEEEeCcCcc--HH--------HHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEec
Confidence 37999999999 45 55566677777889999 3456888999988654 679999883
No 303
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.68 E-value=0.051 Score=48.09 Aligned_cols=56 Identities=13% Similarity=0.158 Sum_probs=36.3
Q ss_pred eEEEEccccccC--CC-CceeEEEecccccccCChhhH-HHHHHHHhccccCCeEEEeecc
Q psy9773 93 LEVIQNKIENVE--LP-EKVDIIVSEWMGFYLLHESMI-DSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 93 i~~~~~d~~~~~--~~-~~fDlIv~~~~~~~l~~~~~~-~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
++++.+|+...- ++ ..||+|+....+..- +...+ ..+|..+.++++|||+|.-.+.
T Consensus 168 L~l~~GDa~~~l~~l~~~~~Da~flDgFsP~k-NPeLWs~e~f~~l~~~~~pgg~laTYta 227 (308)
T 3vyw_A 168 LKVLLGDARKRIKEVENFKADAVFHDAFSPYK-NPELWTLDFLSLIKERIDEKGYWVSYSS 227 (308)
T ss_dssp EEEEESCHHHHGGGCCSCCEEEEEECCSCTTT-SGGGGSHHHHHHHHTTEEEEEEEEESCC
T ss_pred EEEEechHHHHHhhhcccceeEEEeCCCCccc-CcccCCHHHHHHHHHHhCCCcEEEEEeC
Confidence 356778876542 23 479999885532111 11111 4789999999999999985543
No 304
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.68 E-value=0.083 Score=46.96 Aligned_cols=56 Identities=16% Similarity=0.160 Sum_probs=41.8
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCCC--CceeEEE
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVELP--EKVDIIV 113 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~~--~~fDlIv 113 (252)
..+.++|||.||.| .+ ++.+...|+..+.++|+ ... ..+|+..+... ..+|+|+
T Consensus 9 ~~~~~~~dLFaG~G--g~--------~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~--~~~Di~~~~~~~~~~~D~l~ 76 (327)
T 2c7p_A 9 LTGLRFIDLFAGLG--GF--------RLALESCGAECVYSNEWDKYAQEVYEMNFGEK--PEGDITQVNEKTIPDHDILC 76 (327)
T ss_dssp TTTCEEEEETCTTT--HH--------HHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC--CBSCGGGSCGGGSCCCSEEE
T ss_pred cCCCcEEEECCCcC--HH--------HHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC--CcCCHHHcCHhhCCCCCEEE
Confidence 34579999999999 55 55666778888999999 222 26888887543 4699999
Q ss_pred ec
Q psy9773 114 SE 115 (252)
Q Consensus 114 ~~ 115 (252)
..
T Consensus 77 ~g 78 (327)
T 2c7p_A 77 AG 78 (327)
T ss_dssp EE
T ss_pred EC
Confidence 84
No 305
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=94.48 E-value=0.084 Score=47.10 Aligned_cols=87 Identities=14% Similarity=0.153 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC-------------C----------------------
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY-------------L---------------------- 91 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~-------------~---------------------- 91 (252)
.+...|+.||||.. +. ...+... +...++-+|. .
T Consensus 96 ~~~~qVV~LGaGlD--Tr--------~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~ 165 (334)
T 1rjd_A 96 NEKVQVVNLGCGSD--LR--------MLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLID 165 (334)
T ss_dssp CSSEEEEEETCTTC--CT--------HHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEE
T ss_pred CCCcEEEEeCCCCc--cH--------HHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccC
Confidence 34578999999999 66 5555543 2235677776 1
Q ss_pred --ceEEEEccccccCC----------CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEe
Q psy9773 92 --ILEVIQNKIENVEL----------PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYP 146 (252)
Q Consensus 92 --~i~~~~~d~~~~~~----------~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~ 146 (252)
+..++.+|+.+... +....++++..++.++... ....+|..+...+ |+|.+++
T Consensus 166 ~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~-~~~~ll~~ia~~~-~~~~~v~ 230 (334)
T 1rjd_A 166 QGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNN-ESQLLINTIMSKF-SHGLWIS 230 (334)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHH-HHHHHHHHHHHHC-SSEEEEE
T ss_pred CCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHH-HHHHHHHHHHhhC-CCcEEEE
Confidence 46788999987421 2568899998888887444 6888888887766 7777653
No 306
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.25 E-value=0.065 Score=47.85 Aligned_cols=57 Identities=19% Similarity=0.166 Sum_probs=43.0
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcC--CCcEEEeeC------------CceEEEEccccccCCC----CceeEE
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVH--PLDHYAPQY------------LILEVIQNKIENVELP----EKVDII 112 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g--~~~v~gvD~------------~~i~~~~~d~~~~~~~----~~fDlI 112 (252)
.+|||+.||.| .+ ++.+...| +..|+++|+ ....++.+|+..+... ..+|+|
T Consensus 3 ~~v~dLFaG~G--g~--------~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 3 LRVLELYSGVG--GM--------HHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp EEEEEETCTTC--HH--------HHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CeEEEeCcCcc--HH--------HHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEE
Confidence 58999999999 55 55666667 457999999 4456788999887532 269999
Q ss_pred Eeccc
Q psy9773 113 VSEWM 117 (252)
Q Consensus 113 v~~~~ 117 (252)
+..+-
T Consensus 73 ~~gpP 77 (343)
T 1g55_A 73 LMSPP 77 (343)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 98543
No 307
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.94 E-value=0.18 Score=43.44 Aligned_cols=54 Identities=7% Similarity=0.014 Sum_probs=36.8
Q ss_pred ceEEEEccccccC------CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 92 ILEVIQNKIENVE------LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 92 ~i~~~~~d~~~~~------~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
++.++.+++.+.- .+ .++|+|+...- .-......+..+...|+|||++++....
T Consensus 159 ~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D-----~Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 159 RSVLVEGDVRETVPRYLAENPQTVIALAYFDLD-----LYEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp SEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC-----CHHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred cEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc-----ccchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 3566777765441 12 46899987442 1124556788889999999999999853
No 308
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=93.93 E-value=0.2 Score=44.14 Aligned_cols=88 Identities=7% Similarity=-0.057 Sum_probs=64.2
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------------CceEEEEccccccCC------
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------------LILEVIQNKIENVEL------ 105 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------------~~i~~~~~d~~~~~~------ 105 (252)
..|++||||-= +. ...+.......++-+|. .+..++.+|+.+ ..
T Consensus 104 ~QvV~LGaGlD--Tr--------a~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~ 172 (310)
T 2uyo_A 104 RQFVILASGLD--SR--------AYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRS 172 (310)
T ss_dssp CEEEEETCTTC--CH--------HHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHH
T ss_pred CeEEEeCCCCC--ch--------hhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHh
Confidence 57999999987 54 33333211246888887 467789999986 21
Q ss_pred ---C-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 106 ---P-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 106 ---~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
. ...-++++..+++++... ....+|..+...+.||+.|++....
T Consensus 173 ~g~d~~~Pt~~i~Egvl~Yl~~~-~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 173 AGFDPSARTAWLAEGLLMYLPAT-AQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp TTCCTTSCEEEEECSCGGGSCHH-HHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred ccCCCCCCEEEEEechHhhCCHH-HHHHHHHHHHHhCCCCeEEEEEecC
Confidence 1 346778888888887554 7889999999988999999998754
No 309
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.75 E-value=0.057 Score=46.10 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=27.7
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
..+|..|||.+||+| +. +..+.+.| .+++|+|+
T Consensus 210 ~~~~~~vlD~f~GsG--tt--------~~~a~~~g-r~~ig~e~ 242 (260)
T 1g60_A 210 SNPNDLVLDCFMGSG--TT--------AIVAKKLG-RNFIGCDM 242 (260)
T ss_dssp CCTTCEEEESSCTTC--HH--------HHHHHHTT-CEEEEEES
T ss_pred CCCCCEEEECCCCCC--HH--------HHHHHHcC-CeEEEEeC
Confidence 478899999999999 76 66777776 67999998
No 310
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=93.71 E-value=0.064 Score=48.34 Aligned_cols=68 Identities=13% Similarity=0.028 Sum_probs=45.0
Q ss_pred HhccHHHHHHHHHHHHhCCC--CCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC-------------
Q psy9773 27 MLDDTVRNEAYRAAICDNPN--IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY------------- 90 (252)
Q Consensus 27 ~l~~~~~~~~~~~~l~~~~~--~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~------------- 90 (252)
.+.+..-...+.+++..... ..++..|||||.|.| .+ +..++.. .+++|+++++
T Consensus 34 FL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G--~L--------T~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~ 103 (353)
T 1i4w_A 34 YLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVG--IQ--------SAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE 103 (353)
T ss_dssp CBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTC--HH--------HHHHHHHHCCSEEEEECCCHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCC--HH--------HHHHHhhCCCCEEEEEecCHHHHHHHHHhcc
Confidence 44455444444444421110 114689999999999 66 6666654 3468999999
Q ss_pred -CceEEEEccccccC
Q psy9773 91 -LILEVIQNKIENVE 104 (252)
Q Consensus 91 -~~i~~~~~d~~~~~ 104 (252)
.++.++.+|+..+.
T Consensus 104 ~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 104 GSPLQILKRDPYDWS 118 (353)
T ss_dssp TSSCEEECSCTTCHH
T ss_pred CCCEEEEECCccchh
Confidence 57899999996653
No 311
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.48 E-value=0.34 Score=42.37 Aligned_cols=60 Identities=10% Similarity=-0.035 Sum_probs=43.8
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCc--EEEeeC------------CceEEEEccccccCCC-----
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLD--HYAPQY------------LILEVIQNKIENVELP----- 106 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~--v~gvD~------------~~i~~~~~d~~~~~~~----- 106 (252)
....+.+++||.||.| -+ ++.+.+.|... |.++|+ ....++.+|+.++...
T Consensus 12 ~~~~~~~vidLFaG~G--G~--------~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~ 81 (295)
T 2qrv_A 12 EKRKPIRVLSLFDGIA--TG--------LLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEW 81 (295)
T ss_dssp CCCCCEEEEEETCTTT--HH--------HHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHT
T ss_pred ccCCCCEEEEeCcCcc--HH--------HHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhccc
Confidence 3455679999999999 54 45555667654 689998 3456888999988532
Q ss_pred CceeEEEec
Q psy9773 107 EKVDIIVSE 115 (252)
Q Consensus 107 ~~fDlIv~~ 115 (252)
+.+|+|+..
T Consensus 82 ~~~Dll~gg 90 (295)
T 2qrv_A 82 GPFDLVIGG 90 (295)
T ss_dssp CCCSEEEEC
T ss_pred CCcCEEEec
Confidence 469999983
No 312
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=93.43 E-value=0.17 Score=40.41 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=57.2
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccCC------CCceeE
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVEL------PEKVDI 111 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~------~~~fDl 111 (252)
....-|||+|-|+|++.- .+. .....+.++.+|- ..-.++.+|+.+.-. ..+.-+
T Consensus 39 ~~~GpVlElGLGNGRTyd--------HLR-e~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~L 109 (174)
T 3iht_A 39 GLSGPVYELGLGNGRTYH--------HLR-QHVQGREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERFGATASL 109 (174)
T ss_dssp TCCSCEEEECCTTCHHHH--------HHH-HHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHHCSCEEE
T ss_pred CCCCceEEecCCCChhHH--------HHH-HhCCCCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhcCCceEE
Confidence 334579999999996554 222 2233478999998 445689999977621 256777
Q ss_pred EEecccccccCChhhHHHHH-HHHhccccCCeEEEeecc
Q psy9773 112 IVSEWMGFYLLHESMIDSVI-FARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 112 Iv~~~~~~~l~~~~~~~~~l-~~l~~~LkpgG~lv~~~~ 149 (252)
+.+..-.+.-.........+ .-+..+|.|||+++-..+
T Consensus 110 aHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~p 148 (174)
T 3iht_A 110 VHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDR 148 (174)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred EEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCc
Confidence 77754322211111122222 235789999999987654
No 313
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=93.06 E-value=0.19 Score=45.11 Aligned_cols=62 Identities=16% Similarity=0.085 Sum_probs=41.1
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC-------------CceEEEEccccccCC-----
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY-------------LILEVIQNKIENVEL----- 105 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~-------------~~i~~~~~d~~~~~~----- 105 (252)
....+|..++|..||.|+.+. .++...++ .+|+|+|. .++.+++++..++..
T Consensus 53 L~i~pggiyVD~TlG~GGHS~---------~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~ 123 (347)
T 3tka_A 53 LNIRPDGIYIDGTFGRGGHSR---------LILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAER 123 (347)
T ss_dssp TCCCTTCEEEESCCTTSHHHH---------HHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHHT
T ss_pred hCCCCCCEEEEeCcCCCHHHH---------HHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHhc
Confidence 456789999999999996655 22333333 58999999 356677776665521
Q ss_pred --CCceeEEEec
Q psy9773 106 --PEKVDIIVSE 115 (252)
Q Consensus 106 --~~~fDlIv~~ 115 (252)
.+++|.|+.+
T Consensus 124 g~~~~vDgILfD 135 (347)
T 3tka_A 124 DLIGKIDGILLD 135 (347)
T ss_dssp TCTTCEEEEEEE
T ss_pred CCCCcccEEEEC
Confidence 1247777663
No 314
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.95 E-value=0.061 Score=46.83 Aligned_cols=60 Identities=17% Similarity=0.104 Sum_probs=41.8
Q ss_pred CceEEEEccccccC--CC-CceeEEEecccccccCC-----------------hhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 91 LILEVIQNKIENVE--LP-EKVDIIVSEWMGFYLLH-----------------ESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 91 ~~i~~~~~d~~~~~--~~-~~fDlIv~~~~~~~l~~-----------------~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.++.++++|+.+.. ++ ++||+|++++-...... ...+..++..+.++|+|||.|++....
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 56789999998742 33 78999999764321100 012456788899999999999887654
No 315
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.47 E-value=0.35 Score=43.00 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=53.4
Q ss_pred HHhCCCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC-----------CceEEEEcccccc----
Q psy9773 41 ICDNPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------LILEVIQNKIENV---- 103 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------~~i~~~~~d~~~~---- 103 (252)
+.+.....++.+||-+|||. | .+ ...+++ .|+.+|++++. ..-.++..+-.++
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG--~~--------a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~ 251 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVG--LS--------ALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAI 251 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHH--HH--------HHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHH
Confidence 33445678899999999875 4 33 344444 67667999986 1112222111111
Q ss_pred -C-CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 -E-LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 -~-~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
. ..+.+|+|+-... . ...+..+.++|+|+|+++....
T Consensus 252 ~~~~~gg~D~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 252 KEITDGGVNFALESTG-----S----PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp HHHTTSCEEEEEECSC-----C----HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHhcCCCCcEEEECCC-----C----HHHHHHHHHHHhcCCEEEEeCC
Confidence 0 1136999976221 1 2346666789999999987643
No 316
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=91.38 E-value=0.42 Score=41.78 Aligned_cols=80 Identities=16% Similarity=0.046 Sum_probs=50.9
Q ss_pred CccchHHHhhcCCCcEEEeeC---------------CceEEE-EccccccCCCCceeEEEecccccccCCh--------h
Q psy9773 70 GVDHHSFCTKVHPLDHYAPQY---------------LILEVI-QNKIENVELPEKVDIIVSEWMGFYLLHE--------S 125 (252)
Q Consensus 70 ~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~-~~d~~~~~~~~~fDlIv~~~~~~~l~~~--------~ 125 (252)
+-+.+.++.+.....|..|+. ...+++ ++|+......+.+|+|++++....-.|. .
T Consensus 152 ~~~~~~~~~k~~g~~vl~v~~~~~~p~k~v~wi~Pi~GAt~~~~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHar 231 (320)
T 2hwk_A 152 QSDFSSFVSKLKGRTVLVVGEKLSVPGKMVDWLSDRPEATFRARLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAI 231 (320)
T ss_dssp CCCCHHHHHTSSCSEEEEEESCCCCTTSEEEEEESSTTCSEECCGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHH
T ss_pred CCCHHHHHhhCCCcEEEEEecccccCCceeEeeccCCCceeecccccCCccccCcCCEEEEcCCCCCCCccccccchHHH
Confidence 445566766654466777763 333444 5565554444779999997665443333 2
Q ss_pred hHHHHHHHHhccccCCeEEEeecc
Q psy9773 126 MIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 126 ~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+..++..+.++|+|||.|++-..
T Consensus 232 ii~Lal~fA~~vLkPGGtfV~Kvy 255 (320)
T 2hwk_A 232 KLSMLTKKACLHLNPGGTCVSIGY 255 (320)
T ss_dssp HHHHTHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCceEEEEEe
Confidence 334466677899999999998653
No 317
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=89.84 E-value=0.74 Score=41.35 Aligned_cols=92 Identities=13% Similarity=-0.002 Sum_probs=53.7
Q ss_pred CCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC----------CceEEEEccccccCC-------
Q psy9773 45 PNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LILEVIQNKIENVEL------- 105 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i~~~~~d~~~~~~------- 105 (252)
....+|.+||-+|||. | .+ +..+++ .|+.+|++++. ....++ |......
T Consensus 181 ~~~~~g~~VlV~GaG~vG--~~--------aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~~ 248 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVG--RC--------AAAGARLLGAACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQIDQ 248 (398)
T ss_dssp TTCCTTCEEEEECCSHHH--HH--------HHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHHH
Confidence 5678899999999865 5 44 444444 67657999987 223333 2222111
Q ss_pred --C-CceeEEEecccccccCC-----hhhHHHHHHHHhccccCCeEEEeec
Q psy9773 106 --P-EKVDIIVSEWMGFYLLH-----ESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 106 --~-~~fDlIv~~~~~~~l~~-----~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
. ..+|+|+-........+ .......+..+.++|+++|++++..
T Consensus 249 ~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 249 ILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred HhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 1 26999986332110000 0012235666778999999998654
No 318
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=89.80 E-value=0.86 Score=40.35 Aligned_cols=57 Identities=12% Similarity=0.058 Sum_probs=40.0
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCC--CcE-EEeeC------------CceEEEEccccccCCC----Cce
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP--LDH-YAPQY------------LILEVIQNKIENVELP----EKV 109 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~--~~v-~gvD~------------~~i~~~~~d~~~~~~~----~~f 109 (252)
...+++|+.||.| -+ +..+...|. ..+ .++|+ +. .++.+|+.++... ..+
T Consensus 9 ~~~~vidLFaG~G--G~--------~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-~~~~~DI~~~~~~~i~~~~~ 77 (327)
T 3qv2_A 9 KQVNVIEFFSGIG--GL--------RSSYERSSININATFIPFDINEIANKIYSKNFKE-EVQVKNLDSISIKQIESLNC 77 (327)
T ss_dssp CCEEEEEETCTTT--HH--------HHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-CCBCCCTTTCCHHHHHHTCC
T ss_pred CCCEEEEECCChh--HH--------HHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-CcccCChhhcCHHHhccCCC
Confidence 3468999999999 44 445555563 557 79999 22 2677898888543 369
Q ss_pred eEEEecc
Q psy9773 110 DIIVSEW 116 (252)
Q Consensus 110 DlIv~~~ 116 (252)
|+++..+
T Consensus 78 Dil~ggp 84 (327)
T 3qv2_A 78 NTWFMSP 84 (327)
T ss_dssp CEEEECC
T ss_pred CEEEecC
Confidence 9999743
No 319
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=89.74 E-value=0.29 Score=43.53 Aligned_cols=54 Identities=17% Similarity=0.178 Sum_probs=39.7
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCC--CcEEEeeC------------CceEEEEccccccCCC----CceeEE
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP--LDHYAPQY------------LILEVIQNKIENVELP----EKVDII 112 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~--~~v~gvD~------------~~i~~~~~d~~~~~~~----~~fDlI 112 (252)
.+++|+.||.|+ + +..+...|. ..+.++|+ +...++.+|+.++... ..+|+|
T Consensus 4 ~~~idLFaG~GG--~--------~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l 73 (333)
T 4h0n_A 4 HKILELYSGIGG--M--------HCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTI 73 (333)
T ss_dssp EEEEEETCTTTH--H--------HHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEE
T ss_pred CEEEEECcCccH--H--------HHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEE
Confidence 479999999994 4 444555564 56889999 3456788999888543 369999
Q ss_pred Ee
Q psy9773 113 VS 114 (252)
Q Consensus 113 v~ 114 (252)
+.
T Consensus 74 ~g 75 (333)
T 4h0n_A 74 LM 75 (333)
T ss_dssp EE
T ss_pred Ee
Confidence 97
No 320
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.43 E-value=0.17 Score=44.67 Aligned_cols=60 Identities=15% Similarity=0.002 Sum_probs=42.9
Q ss_pred CceEEEEcccccc-C-CC-CceeEEEecccccccC-----------ChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 91 LILEVIQNKIENV-E-LP-EKVDIIVSEWMGFYLL-----------HESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 91 ~~i~~~~~d~~~~-~-~~-~~fDlIv~~~~~~~l~-----------~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
....++++|.... . ++ ++||+|++++-..... +...+..+|..+.++|+|||.+++....
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 5678899998763 2 33 7899999976422110 0124678888999999999999997654
No 321
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=87.78 E-value=0.49 Score=45.86 Aligned_cols=56 Identities=13% Similarity=0.199 Sum_probs=34.8
Q ss_pred ceEEEEccccccCC------CCceeEEEecccccccCChhh-HHHHHHHHhccccCCeEEEeec
Q psy9773 92 ILEVIQNKIENVEL------PEKVDIIVSEWMGFYLLHESM-IDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 92 ~i~~~~~d~~~~~~------~~~fDlIv~~~~~~~l~~~~~-~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.++++.+|+.+.-. ...+|.++........ +... -..++..+.++++|||.+....
T Consensus 149 ~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 149 TLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAK-NPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred EEEEEccCHHHHHhhcccccCCceeEEEECCCCCCC-ChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 35567777754421 2579999885532211 1111 2467888899999999987543
No 322
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=87.72 E-value=1.3 Score=39.61 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=54.2
Q ss_pred CCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC----------CceEEEEccccc-cC------C
Q psy9773 45 PNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LILEVIQNKIEN-VE------L 105 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i~~~~~d~~~-~~------~ 105 (252)
....+|.+||-+|||. | .+ +..+++ .|+.+|+++|. ....++...-.+ +. .
T Consensus 181 ~~~~~g~~VlV~GaG~vG--~~--------aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t 250 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVG--LA--------AAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALL 250 (398)
T ss_dssp TTCCTTCEEEEECCSHHH--HH--------HHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCcHHH--HH--------HHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHh
Confidence 5678899999999864 4 44 444444 67667999987 223333211111 10 0
Q ss_pred C-CceeEEEeccccccc------CChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 106 P-EKVDIIVSEWMGFYL------LHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 106 ~-~~fDlIv~~~~~~~l------~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
. ..+|+|+-....... .+..+....+..+.++|++||++++..
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 1 369999873321100 011123345677778999999998654
No 323
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=86.26 E-value=3.5 Score=36.02 Aligned_cols=82 Identities=15% Similarity=0.084 Sum_probs=50.2
Q ss_pred CCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC----------Cce-EEEEccccccCCCCceeE
Q psy9773 45 PNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LIL-EVIQNKIENVELPEKVDI 111 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i-~~~~~d~~~~~~~~~fDl 111 (252)
....+|.+||-+|+|. | .+ +..+++ .|+ +|++++. ... .++ .+...+ ...+|+
T Consensus 172 ~~~~~g~~VlV~GaG~vG--~~--------a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~~--~~~~D~ 237 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLG--SM--------AVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-TDPKQC--KEELDF 237 (348)
T ss_dssp TTCCTTCEEEEESCSHHH--HH--------HHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-SSGGGC--CSCEEE
T ss_pred cCCCCCCEEEEECCcHHH--HH--------HHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-CCHHHH--hcCCCE
Confidence 4678899999999864 4 33 344444 665 7999887 111 222 332222 237999
Q ss_pred EEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 112 IVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 112 Iv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
|+-... ... .+..+.++|+|+|+++....
T Consensus 238 vid~~g-----~~~----~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 238 IISTIP-----THY----DLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp EEECCC-----SCC----CHHHHHTTEEEEEEEEECCC
T ss_pred EEECCC-----cHH----HHHHHHHHHhcCCEEEEECC
Confidence 976221 111 24556689999999997653
No 324
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=85.47 E-value=1.2 Score=41.58 Aligned_cols=56 Identities=11% Similarity=0.211 Sum_probs=40.0
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccccccCC---------
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIENVEL--------- 105 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~~~~--------- 105 (252)
..+++||.||.|+ + +..+...|...|.++|+ +...++.+|+.++..
T Consensus 88 ~~~viDLFaG~GG--l--------slG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~ 157 (482)
T 3me5_A 88 AFRFIDLFAGIGG--I--------RRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDE 157 (482)
T ss_dssp SEEEEEESCTTSH--H--------HHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHH
T ss_pred cceEEEecCCccH--H--------HHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchh
Confidence 3589999999994 4 44555567667889998 134577889887642
Q ss_pred ---------CCceeEEEec
Q psy9773 106 ---------PEKVDIIVSE 115 (252)
Q Consensus 106 ---------~~~fDlIv~~ 115 (252)
...+|+|+..
T Consensus 158 ~~~~~i~~~~~~~Dvl~gG 176 (482)
T 3me5_A 158 AAAEHIRQHIPEHDVLLAG 176 (482)
T ss_dssp HHHHHHHHHSCCCSEEEEE
T ss_pred hHHhhhhhcCCCCCEEEec
Confidence 1468999873
No 325
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=85.44 E-value=0.99 Score=43.49 Aligned_cols=54 Identities=15% Similarity=0.242 Sum_probs=33.4
Q ss_pred EEEEccccccCC------CCceeEEEecccccccCChhh-HHHHHHHHhccccCCeEEEeec
Q psy9773 94 EVIQNKIENVEL------PEKVDIIVSEWMGFYLLHESM-IDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 94 ~~~~~d~~~~~~------~~~fDlIv~~~~~~~l~~~~~-~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
++..+|+.+.-. ...||+|+........ +... -..+|..+.++++|||.+....
T Consensus 159 ~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 159 DLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-CGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred EEecCCHHHHHHhcccccCCcccEEEECCCCCcC-ChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 355666654311 2579999886543221 1111 2367888999999999997554
No 326
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=84.68 E-value=0.69 Score=40.77 Aligned_cols=59 Identities=14% Similarity=0.163 Sum_probs=40.2
Q ss_pred ceEEE-Ecccccc--CCC-CceeEEEeccccccc--------CChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 92 ILEVI-QNKIENV--ELP-EKVDIIVSEWMGFYL--------LHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 92 ~i~~~-~~d~~~~--~~~-~~fDlIv~~~~~~~l--------~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
...++ ++|.... .++ ++||+|++++-.... .+...+...|..+.++|+|||.+++....
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 35667 8888654 233 689999997642211 01124567778889999999999987654
No 327
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=83.88 E-value=0.89 Score=39.95 Aligned_cols=33 Identities=9% Similarity=0.019 Sum_probs=27.0
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
..+|..|||..||+| +. +..+...| .+.+|+|+
T Consensus 250 ~~~~~~VlDpF~GsG--tt--------~~aa~~~g-r~~ig~e~ 282 (323)
T 1boo_A 250 TEPDDLVVDIFGGSN--TT--------GLVAERES-RKWISFEM 282 (323)
T ss_dssp CCTTCEEEETTCTTC--HH--------HHHHHHTT-CEEEEEES
T ss_pred CCCCCEEEECCCCCC--HH--------HHHHHHcC-CCEEEEeC
Confidence 478899999999999 66 55666666 67999998
No 328
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=82.89 E-value=0.72 Score=39.09 Aligned_cols=56 Identities=13% Similarity=0.041 Sum_probs=37.2
Q ss_pred eEEEEcccccc--CCC-CceeEEEecccccccCC-------h----hhHHHHHHHHhccccCCeEEEeec
Q psy9773 93 LEVIQNKIENV--ELP-EKVDIIVSEWMGFYLLH-------E----SMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 93 i~~~~~d~~~~--~~~-~~fDlIv~~~~~~~l~~-------~----~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
..++++|.... .++ ++||+|++++-...... . ..+..+|..+.++|+|||.+++..
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 35677887544 123 68999999764221100 0 135677788899999999999874
No 329
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=82.25 E-value=2.1 Score=37.25 Aligned_cols=88 Identities=15% Similarity=0.003 Sum_probs=51.7
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEcccccc-------CCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENV-------ELP 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~-------~~~ 106 (252)
....+|.+||=+|+|.++... ...++..+..+|+++|. ..-.++...-.++ ...
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a--------~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g 230 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLA--------IQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGG 230 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHH--------HHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTS
T ss_pred cCCCCCCEEEEEcCCCccHHH--------HHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCC
Confidence 456889999999998764444 44455565678999997 1111221111111 111
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
..+|+++.... . ...+....++|+++|++++...
T Consensus 231 ~g~d~~~~~~~-----~----~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 231 LGVQSAIVCAV-----A----RIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp SCEEEEEECCS-----C----HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCceEEEEecc-----C----cchhheeheeecCCceEEEEec
Confidence 34666654221 1 2345566688999999987653
No 330
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=80.82 E-value=4.3 Score=35.16 Aligned_cols=88 Identities=9% Similarity=-0.003 Sum_probs=52.2
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEcccccc-------CCC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENV-------ELP 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~-------~~~ 106 (252)
....++.+||=.|+|..+... ..++...|+..+++++. ....++...-.+. ...
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~a--------iq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~ 227 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLA--------IQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLREL 227 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHH--------HHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGG
T ss_pred hccCCCCEEEEECCCCcchHH--------HHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhccc
Confidence 567889999999997654443 44455577777788887 1122222111111 011
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
..+|+|+.... ....+..+.++|++||++++...
T Consensus 228 ~g~d~v~d~~G---------~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 228 RFNQLILETAG---------VPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp CSSEEEEECSC---------SHHHHHHHHHHCCTTCEEEECCC
T ss_pred CCccccccccc---------ccchhhhhhheecCCeEEEEEec
Confidence 45788865221 12345566688999999987653
No 331
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=80.30 E-value=1.3 Score=38.87 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=27.6
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCCc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYLI 92 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~~ 92 (252)
..+|..|||..||+| +. +..+...| .+.+|+|+..
T Consensus 240 ~~~~~~vlDpF~GsG--tt--------~~aa~~~~-r~~ig~e~~~ 274 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSG--VT--------ARVAIQEG-RNSICTDAAP 274 (319)
T ss_dssp SCTTCEEEETTCTTC--HH--------HHHHHHHT-CEEEEEESST
T ss_pred CCCCCEEEecCCCCC--HH--------HHHHHHcC-CcEEEEECCc
Confidence 478899999999999 65 55666666 6788998843
No 332
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=79.77 E-value=4.5 Score=35.18 Aligned_cols=90 Identities=12% Similarity=-0.005 Sum_probs=50.7
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHH-HhhcCCCcEEEeeC-----------CceEEEEcccccc-----
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSF-CTKVHPLDHYAPQY-----------LILEVIQNKIENV----- 103 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~-~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~----- 103 (252)
+.+.....+|.+||-+|||+|--.. ... +...|+ +|++++. ..-.++...-.++
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~--------~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~ 206 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHL--------FAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVM 206 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHH--------HHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHH--------HHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHH
Confidence 3344678899999999998542133 333 334676 7999887 1111221111111
Q ss_pred --CCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 --ELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 --~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.....+|+|+.... ... +. ...++|+|+|+++....
T Consensus 207 ~~~~~~g~Dvvid~~g------~~~---~~-~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 207 ELTNGIGADAAIDSIG------GPD---GN-ELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp HHTTTSCEEEEEESSC------HHH---HH-HHHHTEEEEEEEEECCC
T ss_pred HHhCCCCCcEEEECCC------Chh---HH-HHHHHhcCCCEEEEEee
Confidence 11136999976321 111 12 23378999999987653
No 333
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=79.32 E-value=4.9 Score=40.89 Aligned_cols=58 Identities=16% Similarity=0.042 Sum_probs=39.4
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC------------CceEEEEcccccc------------
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY------------LILEVIQNKIENV------------ 103 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~------------~~i~~~~~d~~~~------------ 103 (252)
...++|||.||.| -+ ++-+...|. ..+.++|+ +...++.+|+..+
T Consensus 539 ~~l~~iDLFaG~G--Gl--------slGl~~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~ 608 (1002)
T 3swr_A 539 PKLRTLDVFSGCG--GL--------SEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNS 608 (1002)
T ss_dssp CCEEEEEESCTTS--HH--------HHHHHHHTSEEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCT
T ss_pred CCCeEEEeccCcc--HH--------HHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhh
Confidence 3468999999999 44 445555675 56889999 4556777775432
Q ss_pred -----CCCCceeEEEecc
Q psy9773 104 -----ELPEKVDIIVSEW 116 (252)
Q Consensus 104 -----~~~~~fDlIv~~~ 116 (252)
+..+.+|+|+..+
T Consensus 609 ~~~~lp~~~~vDll~GGp 626 (1002)
T 3swr_A 609 RGQRLPQKGDVEMLCGGP 626 (1002)
T ss_dssp TCCBCCCTTTCSEEEECC
T ss_pred hhhhcccCCCeeEEEEcC
Confidence 1125799999843
No 334
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=79.05 E-value=6.1 Score=34.92 Aligned_cols=86 Identities=17% Similarity=0.191 Sum_probs=51.1
Q ss_pred CCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC-----------CceEEEEcccccc--------
Q psy9773 45 PNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------LILEVIQNKIENV-------- 103 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------~~i~~~~~d~~~~-------- 103 (252)
....+|.+||-+|+|. | .+ +..+++ .|+.+|++++. .--.++...-.++
T Consensus 178 ~~~~~g~~VlV~GaG~vG--~~--------aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~ 247 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIG--LL--------TVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPV 247 (370)
T ss_dssp HTCCTTCEEEEECCSHHH--HH--------HHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTT
T ss_pred cCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhh
Confidence 4678899999999854 3 33 344444 67668999987 1111221111111
Q ss_pred -CCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 -ELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 -~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
..++.+|+|+-... . ...+..+.++|++||+++....
T Consensus 248 ~~~~gg~Dvvid~~G-----~----~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 248 GLVPGGVDVVIECAG-----V----AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp SSSTTCEEEEEECSC-----C----HHHHHHHHHHEEEEEEEEECSC
T ss_pred hccCCCCCEEEECCC-----C----HHHHHHHHHHhccCCEEEEEec
Confidence 11247999976221 1 2345666788999999987653
No 335
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.30 E-value=4 Score=36.12 Aligned_cols=85 Identities=19% Similarity=0.088 Sum_probs=48.5
Q ss_pred CCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC-----------CceEEEEcccccc--CCCCce
Q psy9773 45 PNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------LILEVIQNKIENV--ELPEKV 109 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------~~i~~~~~d~~~~--~~~~~f 109 (252)
....+|.+||-+|+|. | .+ ...+++ .|+ +|++++. ..-.++...-.+. ...+.+
T Consensus 190 ~~~~~g~~VlV~GaG~vG--~~--------aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~ 258 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLG--HM--------GIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSF 258 (369)
T ss_dssp TTCCTTCEEEEECCSHHH--HH--------HHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCE
T ss_pred cCCCCCCEEEEECCCHHH--HH--------HHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCC
Confidence 3678899999999864 4 33 344444 665 5999886 1111221110010 011579
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
|+|+-... .. ..+..+.++|+|+|+++....
T Consensus 259 Dvvid~~g-----~~----~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 259 DFILNTVA-----AP----HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EEEEECCS-----SC----CCHHHHHTTEEEEEEEEECCC
T ss_pred CEEEECCC-----CH----HHHHHHHHHhccCCEEEEecc
Confidence 99976321 11 124455688999999987543
No 336
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=78.03 E-value=6 Score=29.66 Aligned_cols=84 Identities=13% Similarity=0.057 Sum_probs=52.4
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccCC----C-CceeEEEe
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVEL----P-EKVDIIVS 114 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~----~-~~fDlIv~ 114 (252)
..+|+=+|||.=+..+ +..+...| ..|+++|. ..+.++.+|..+... . ..+|+|++
T Consensus 7 ~~~viIiG~G~~G~~l--------a~~L~~~g-~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLL--------GEKLLASD-IPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECCSHHHHHH--------HHHHHHTT-CCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECcCHHHHHH--------HHHHHHCC-CCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 4679999998744444 55565666 47999998 467788888866521 1 56898876
Q ss_pred cccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 115 EWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 115 ~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.. .....-..+ ....+.+.|+..++...
T Consensus 78 ~~-----~~~~~n~~~-~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 78 TI-----PNGYEAGEI-VASARAKNPDIEIIARA 105 (140)
T ss_dssp CC-----SCHHHHHHH-HHHHHHHCSSSEEEEEE
T ss_pred EC-----CChHHHHHH-HHHHHHHCCCCeEEEEE
Confidence 32 222222222 23446678888776544
No 337
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=77.78 E-value=7.8 Score=34.08 Aligned_cols=86 Identities=13% Similarity=0.033 Sum_probs=51.0
Q ss_pred hCCCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC----------CceEEEEccccc----cC--
Q psy9773 43 DNPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LILEVIQNKIEN----VE-- 104 (252)
Q Consensus 43 ~~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i~~~~~d~~~----~~-- 104 (252)
......+|.+||-+|+|. | .+ +..+++ .|+.+|++++. .....+ .|..+ +.
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG--~~--------a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~ 254 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVG--LA--------AVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQV 254 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHH--HH--------HHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHH
T ss_pred hccCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHH
Confidence 445678899999999754 3 33 334444 67657999986 112111 12221 10
Q ss_pred ----CCCceeEEEecccccccCChhhHHHHHHHHhccccCC-eEEEeec
Q psy9773 105 ----LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPE-GVMYPYK 148 (252)
Q Consensus 105 ----~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~Lkpg-G~lv~~~ 148 (252)
..+.+|+|+-... . ...+..+.++|+|+ |+++...
T Consensus 255 ~~~~~~~g~D~vid~~g-----~----~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 255 LSKMTNGGVDFSLECVG-----N----VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHHHHTSCBSEEEECSC-----C----HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHHHhCCCCCEEEECCC-----C----HHHHHHHHHHhhcCCcEEEEEc
Confidence 0136999976221 1 23456667899999 9998754
No 338
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=77.66 E-value=8.9 Score=30.18 Aligned_cols=90 Identities=18% Similarity=0.241 Sum_probs=51.1
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccC------
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVE------ 104 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~------ 104 (252)
+.......++++||-.|++.|--.. ....+...|+ +|++++. ...... .|..+..
T Consensus 30 l~~~~~~~~g~~vlV~Ga~ggiG~~-------~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~ 100 (198)
T 1pqw_A 30 LCEVGRLSPGERVLIHSATGGVGMA-------AVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEIL 100 (198)
T ss_dssp HHTTSCCCTTCEEEETTTTSHHHHH-------HHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHH
T ss_pred HHHHhCCCCCCEEEEeeCCChHHHH-------HHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEE-eeCCcHHHHHHHH
Confidence 3333567889999999964431022 0233444675 6888887 111111 2332211
Q ss_pred --C-CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 --L-PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 --~-~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
. ...+|+++.... . ..+..+.+.|+|+|+++....
T Consensus 101 ~~~~~~~~D~vi~~~g------~----~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 101 ELTDGYGVDVVLNSLA------G----EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HHTTTCCEEEEEECCC------T----HHHHHHHHTEEEEEEEEECSC
T ss_pred HHhCCCCCeEEEECCc------h----HHHHHHHHHhccCCEEEEEcC
Confidence 0 135999986321 1 245667789999999987653
No 339
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=77.52 E-value=7.5 Score=34.14 Aligned_cols=87 Identities=14% Similarity=0.044 Sum_probs=51.4
Q ss_pred HHhCCCCCCCCEEEEEcCCc-CchhhhhccCccchHHHh-hcCCCcEEEeeC-----------CceEEEEccccc----c
Q psy9773 41 ICDNPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCT-KVHPLDHYAPQY-----------LILEVIQNKIEN----V 103 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a-~~g~~~v~gvD~-----------~~i~~~~~d~~~----~ 103 (252)
+.+.....+|.+||-+|+|. | .+ +..++ ..|+.+|++++. ..-.++ |..+ +
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG--~~--------avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~ 249 (373)
T 2fzw_A 182 AVNTAKLEPGSVCAVFGLGGVG--LA--------VIMGCKVAGASRIIGVDINKDKFARAKEFGATECI--NPQDFSKPI 249 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHH--HH--------HHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEE--CGGGCSSCH
T ss_pred HHhhcCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEe--ccccccccH
Confidence 33445678899999999764 3 33 33333 367667999986 111122 2221 1
Q ss_pred C------CCCceeEEEecccccccCChhhHHHHHHHHhccccCC-eEEEeec
Q psy9773 104 E------LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPE-GVMYPYK 148 (252)
Q Consensus 104 ~------~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~Lkpg-G~lv~~~ 148 (252)
. ..+.+|+|+-... . ...+..+.++|+|+ |+++...
T Consensus 250 ~~~v~~~~~~g~D~vid~~g-----~----~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 250 QEVLIEMTDGGVDYSFECIG-----N----VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HHHHHHHTTSCBSEEEECSC-----C----HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHHHHHHhCCCCCEEEECCC-----c----HHHHHHHHHhhccCCcEEEEEe
Confidence 0 0136999976221 1 23456667899999 9998754
No 340
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=77.44 E-value=4.7 Score=35.33 Aligned_cols=86 Identities=16% Similarity=0.155 Sum_probs=50.5
Q ss_pred CCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC----------Cce-EEEEcc---ccccC----
Q psy9773 45 PNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LIL-EVIQNK---IENVE---- 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i-~~~~~d---~~~~~---- 104 (252)
....+|.+||-+|+|. | .+ +..+++ .|+.+|++++. ... .++..+ ..++.
T Consensus 167 ~~~~~g~~VlV~GaG~vG--~~--------aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIG--MV--------TLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236 (356)
T ss_dssp HTCCTTCEEEEECCSHHH--HH--------HHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHH
Confidence 4678899999999864 4 33 344444 67657999987 111 222211 01110
Q ss_pred --CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 --LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 --~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
....+|+|+-... . ...+..+.++|+|+|+++....
T Consensus 237 ~~~~~g~D~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 237 GQLGCKPEVTIECTG-----A----EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHTSCCSEEEECSC-----C----HHHHHHHHHHSCTTCEEEECSC
T ss_pred HHhCCCCCEEEECCC-----C----hHHHHHHHHHhcCCCEEEEEec
Confidence 0146999976221 1 1245566688999999987643
No 341
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=77.15 E-value=2.3 Score=38.53 Aligned_cols=34 Identities=9% Similarity=-0.055 Sum_probs=25.9
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHh-h-cC-CCcEEEeeC
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCT-K-VH-PLDHYAPQY 90 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a-~-~g-~~~v~gvD~ 90 (252)
..++.+|+|+||+.| .. +..++ + .+ +.+|+++++
T Consensus 224 l~~~~~viDvGAn~G--~~--------s~~~a~~~~~~~~~V~afEP 260 (409)
T 2py6_A 224 FSDSEKMVDCGASIG--ES--------LAGLIGVTKGKFERVWMIEP 260 (409)
T ss_dssp CCSSCEEEEETCTTS--HH--------HHHHHHHHTSCCSEEEEECC
T ss_pred cCCCCEEEECCCCcC--HH--------HHHHHHHhcCCCCEEEEEcC
Confidence 368899999999999 55 55555 3 33 268999999
No 342
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=76.89 E-value=7.3 Score=33.74 Aligned_cols=86 Identities=9% Similarity=-0.010 Sum_probs=50.8
Q ss_pred CCCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC----------Cce-EEEEccccccC-----C
Q psy9773 44 NPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LIL-EVIQNKIENVE-----L 105 (252)
Q Consensus 44 ~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i-~~~~~d~~~~~-----~ 105 (252)
.....+|.+||-.|+|. | .+ +..+++ .|+ +|++++. ... .++...-.++. .
T Consensus 161 ~~~~~~g~~VlV~GaG~vG--~~--------a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~ 229 (340)
T 3s2e_A 161 VTDTRPGQWVVISGIGGLG--HV--------AVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKE 229 (340)
T ss_dssp TTTCCTTSEEEEECCSTTH--HH--------HHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCHHH--HH--------HHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHh
Confidence 35778899999999864 4 44 344444 675 7999987 111 12211111110 0
Q ss_pred CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+.+|+|+-... ....+..+.+.|+|+|+++....
T Consensus 230 ~g~~d~vid~~g---------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 230 IGGAHGVLVTAV---------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp HSSEEEEEESSC---------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEEeCC---------CHHHHHHHHHHhccCCEEEEeCC
Confidence 136888875221 12345666788999999987643
No 343
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=76.28 E-value=8.8 Score=33.75 Aligned_cols=89 Identities=15% Similarity=0.008 Sum_probs=51.8
Q ss_pred HHhCCCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC----------CceEEEEccccc----cC
Q psy9773 41 ICDNPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LILEVIQNKIEN----VE 104 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i~~~~~d~~~----~~ 104 (252)
+.......+|.+||-+|+|. | .+ +..+++ .|+.+|++++. .....+ .|..+ +.
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG--~~--------aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~ 255 (376)
T 1e3i_A 187 AINTAKVTPGSTCAVFGLGCVG--LS--------AIIGCKIAGASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQ 255 (376)
T ss_dssp HHTTSCCCTTCEEEEECCSHHH--HH--------HHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHH
T ss_pred HHHhcCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEE-EccccccchHH
Confidence 33445678899999999763 3 33 334444 67657999986 111111 12221 10
Q ss_pred ------CCCceeEEEecccccccCChhhHHHHHHHHhccccCC-eEEEeecc
Q psy9773 105 ------LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPE-GVMYPYKC 149 (252)
Q Consensus 105 ------~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~Lkpg-G~lv~~~~ 149 (252)
..+.+|+|+-... . ...+..+.++|+++ |+++....
T Consensus 256 ~~v~~~~~~g~Dvvid~~G-----~----~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 256 DVITELTAGGVDYSLDCAG-----T----AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHHHHHHTSCBSEEEESSC-----C----HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHHHHHhCCCccEEEECCC-----C----HHHHHHHHHHhhcCCCEEEEECC
Confidence 0136999975221 1 23456667899999 99986543
No 344
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=76.08 E-value=9.8 Score=33.53 Aligned_cols=88 Identities=15% Similarity=0.067 Sum_probs=52.6
Q ss_pred HHhCCCCCCCCEEEEEcCCc-CchhhhhccCccchHHHh-hcCCCcEEEeeC----------Cce-EEEEccccc--cC-
Q psy9773 41 ICDNPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCT-KVHPLDHYAPQY----------LIL-EVIQNKIEN--VE- 104 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a-~~g~~~v~gvD~----------~~i-~~~~~d~~~--~~- 104 (252)
+.+.....+|.+||=+|+|. | .+ +..++ ..|+.+|+++|. ... .++ |..+ ..
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG--~~--------a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi--~~~~~~~~~ 252 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVG--LA--------VAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFV--NPKDHDKPI 252 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHH--HH--------HHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEE--CGGGCSSCH
T ss_pred HHhhcCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEE--ccccCchhH
Confidence 33446778899999999863 4 33 33444 467767999986 111 122 2211 10
Q ss_pred -------CCCceeEEEecccccccCChhhHHHHHHHHhccccCC-eEEEeecc
Q psy9773 105 -------LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPE-GVMYPYKC 149 (252)
Q Consensus 105 -------~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~Lkpg-G~lv~~~~ 149 (252)
..+.+|+|+-... . ...+..+.++|++| |+++....
T Consensus 253 ~~~i~~~~~gg~D~vid~~g-----~----~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 253 QEVIVDLTDGGVDYSFECIG-----N----VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HHHHHHHTTSCBSEEEECSC-----C----HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHHHHHhcCCCCCEEEECCC-----C----HHHHHHHHHHhhccCCEEEEEcc
Confidence 1146999976221 1 23456667899996 99987653
No 345
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=75.92 E-value=7.2 Score=33.67 Aligned_cols=90 Identities=10% Similarity=-0.020 Sum_probs=52.1
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC-----------ceEEEEccccccCC----
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL-----------ILEVIQNKIENVEL---- 105 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~-----------~i~~~~~d~~~~~~---- 105 (252)
+.+.....+|++||-.||+.|--.. ...++...|+ +|++++.. ....+ .|..+...
T Consensus 141 l~~~~~~~~g~~vlI~Ga~g~iG~~-------~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~ 211 (336)
T 4b7c_A 141 LLDVGQPKNGETVVISGAAGAVGSV-------AGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGA-IDYKNEDLAAGL 211 (336)
T ss_dssp HHHTTCCCTTCEEEESSTTSHHHHH-------HHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEE-EETTTSCHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCCHHHHH-------HHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEE-EECCCHHHHHHH
Confidence 4344678899999999984431133 0233344665 79998861 11111 12211111
Q ss_pred ----CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 ----PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ----~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+.+|+|+.... . ..+..+.+.|+++|+++....
T Consensus 212 ~~~~~~~~d~vi~~~g--------~--~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 212 KRECPKGIDVFFDNVG--------G--EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp HHHCTTCEEEEEESSC--------H--HHHHHHHTTEEEEEEEEECCC
T ss_pred HHhcCCCceEEEECCC--------c--chHHHHHHHHhhCCEEEEEee
Confidence 146999976221 1 256677799999999987643
No 346
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=75.88 E-value=11 Score=33.06 Aligned_cols=87 Identities=15% Similarity=0.037 Sum_probs=51.5
Q ss_pred HHhCCCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC----------Cce-EEEEccccc----c
Q psy9773 41 ICDNPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LIL-EVIQNKIEN----V 103 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i-~~~~~d~~~----~ 103 (252)
+.+.....+|.+||-+|+|. | .+ +..+++ .|+.+|++++. ... .++ |..+ +
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG--~~--------aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi--~~~~~~~~~ 250 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVG--FS--------AIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL--NPKDYDKPI 250 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHH--HH--------HHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEE--CGGGCSSCH
T ss_pred HHhccCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEE--ecccccchH
Confidence 33445678899999999864 3 33 333443 67667999986 111 122 2221 1
Q ss_pred C------CCCceeEEEecccccccCChhhHHHHHHHHhccccCC-eEEEeec
Q psy9773 104 E------LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPE-GVMYPYK 148 (252)
Q Consensus 104 ~------~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~Lkpg-G~lv~~~ 148 (252)
. ..+.+|+|+-... . ...+..+.++|+++ |+++...
T Consensus 251 ~~~i~~~t~gg~Dvvid~~g-----~----~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 251 YEVICEKTNGGVDYAVECAG-----R----IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HHHHHHHTTSCBSEEEECSC-----C----HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHHHHHHhCCCCCEEEECCC-----C----HHHHHHHHHHHhcCCCEEEEEc
Confidence 0 0136999976221 1 23456667899999 9998654
No 347
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=75.71 E-value=6.9 Score=33.72 Aligned_cols=91 Identities=12% Similarity=0.117 Sum_probs=51.0
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEcccccc------
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENV------ 103 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~------ 103 (252)
+.......+|.+||-.|++.|--.. ...++...|+ +|++++. ..-.++...-.++
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~-------~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~ 203 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSL-------ACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLE 203 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHH-------HHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHH-------HHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHH
Confidence 3344567889999999943321133 0233444676 7999887 1112222111111
Q ss_pred -CCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 -ELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 -~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.....+|+|+.... . ..+..+.+.|+++|+++....
T Consensus 204 ~~~~~g~Dvvid~~g-~---------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 204 LTDGKKCPVVYDGVG-Q---------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp HTTTCCEEEEEESSC-G---------GGHHHHHTTEEEEEEEEECCC
T ss_pred HhCCCCceEEEECCC-h---------HHHHHHHHHhcCCCEEEEEec
Confidence 11146999986332 1 234556789999999987654
No 348
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=75.43 E-value=3.5 Score=36.06 Aligned_cols=85 Identities=20% Similarity=0.173 Sum_probs=50.5
Q ss_pred CCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC-----------CceEEEEcccccc-------C
Q psy9773 45 PNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------LILEVIQNKIENV-------E 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------~~i~~~~~d~~~~-------~ 104 (252)
....+|.+||-+|+|. | .+ +..+++ .|+.+|+++|. .--.++..+-.++ .
T Consensus 162 ~~~~~g~~VlV~GaG~vG--~~--------a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVG--LM--------SVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKAT 231 (352)
T ss_dssp TTCCTTCCEEEECCSHHH--HH--------HHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHc
Confidence 5678899999999864 4 33 344444 67667999988 1112221111111 1
Q ss_pred CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 105 LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 105 ~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
....+|+|+-... .. ..+..+.++|+|+|+++...
T Consensus 232 ~g~g~D~v~d~~g-----~~----~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 232 DGKGVDKVVIAGG-----DV----HTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTCCEEEEEECSS-----CT----THHHHHHHHEEEEEEEEECC
T ss_pred CCCCCCEEEECCC-----Ch----HHHHHHHHHHhcCCEEEEec
Confidence 1136999976221 11 24556678899999998654
No 349
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=75.02 E-value=6.5 Score=34.64 Aligned_cols=79 Identities=19% Similarity=0.195 Sum_probs=47.0
Q ss_pred CCCEEEEEc-CC-cCchhhhhccCccchHHHhhc-CCCcEEEeeC----------CceE-EEEcc------ccccCCCCc
Q psy9773 49 AGKTVLDVG-TG-TGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY----------LILE-VIQNK------IENVELPEK 108 (252)
Q Consensus 49 ~~~~VLDlG-cG-tG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~----------~~i~-~~~~d------~~~~~~~~~ 108 (252)
+|.+||=.| +| .| .+ +..+++. +..+|++++. .... ++... +..+ ..+.
T Consensus 171 ~g~~VlV~Ga~G~vG--~~--------a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~-~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVG--SI--------AVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAAL-GLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHH--HH--------HHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTT-CSCC
T ss_pred CCCEEEEECCCCHHH--HH--------HHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHh-cCCC
Confidence 788999998 43 34 44 5556653 4467999988 1111 22110 0111 1147
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEee
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~ 147 (252)
+|+|+-... -...+..+.++|+|+|+++..
T Consensus 240 ~Dvvid~~g---------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTTH---------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECSC---------HHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECCC---------chhhHHHHHHHhcCCCEEEEE
Confidence 999876221 123556677899999999876
No 350
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=74.95 E-value=12 Score=32.87 Aligned_cols=88 Identities=10% Similarity=0.008 Sum_probs=51.1
Q ss_pred HHhCCCCCCCCEEEEEcCCc-CchhhhhccCccchHHHh-hcCCCcEEEeeC----------CceEEEEccccc----cC
Q psy9773 41 ICDNPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCT-KVHPLDHYAPQY----------LILEVIQNKIEN----VE 104 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a-~~g~~~v~gvD~----------~~i~~~~~d~~~----~~ 104 (252)
+.+.....+|.+||-+|+|. | .+ ...++ ..|+.+|++++. .....+ .|..+ +.
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG--~~--------a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~ 251 (374)
T 2jhf_A 183 AVKVAKVTQGSTCAVFGLGGVG--LS--------VIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC-VNPQDYKKPIQ 251 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHH--HH--------HHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHH
T ss_pred HHhccCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceE-ecccccchhHH
Confidence 33445678899999999764 3 33 33333 367657999986 111111 12221 10
Q ss_pred ------CCCceeEEEecccccccCChhhHHHHHHHHhccccCC-eEEEeec
Q psy9773 105 ------LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPE-GVMYPYK 148 (252)
Q Consensus 105 ------~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~Lkpg-G~lv~~~ 148 (252)
..+.+|+|+-... . ...+..+.++|+++ |+++...
T Consensus 252 ~~~~~~~~~g~D~vid~~g-----~----~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 252 EVLTEMSNGGVDFSFEVIG-----R----LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HHHHHHTTSCBSEEEECSC-----C----HHHHHHHHHHBCTTTCEEEECS
T ss_pred HHHHHHhCCCCcEEEECCC-----C----HHHHHHHHHHhhcCCcEEEEec
Confidence 0136999976221 1 13456667889999 9998754
No 351
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=74.83 E-value=9.6 Score=32.79 Aligned_cols=89 Identities=9% Similarity=-0.028 Sum_probs=51.7
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccc-cC-----
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIEN-VE----- 104 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~-~~----- 104 (252)
+.+.....++++||-.||+.|--.. ....++..|+ +|++++. ..... ..|..+ ..
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~-------~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~ 207 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSV-------VGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDA-AFNYKTVNSLEEAL 207 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHH-------HHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSE-EEETTSCSCHHHHH
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHH-------HHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcE-EEecCCHHHHHHHH
Confidence 3344567889999999984441122 1233444675 7988886 11111 123332 11
Q ss_pred ---CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 105 ---LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 105 ---~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
..+.+|+++.+.. . ..+..+.++|++||++++..
T Consensus 208 ~~~~~~~~d~vi~~~g--------~--~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 208 KKASPDGYDCYFDNVG--------G--EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HHHCTTCEEEEEESSC--------H--HHHHHHHTTEEEEEEEEECC
T ss_pred HHHhCCCCeEEEECCC--------h--HHHHHHHHHHhcCCEEEEEe
Confidence 0146999977332 1 23566679999999998754
No 352
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=74.31 E-value=7.9 Score=33.13 Aligned_cols=83 Identities=16% Similarity=-0.006 Sum_probs=48.9
Q ss_pred hCCCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC---------CceEEEEccccccCCCCceeE
Q psy9773 43 DNPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY---------LILEVIQNKIENVELPEKVDI 111 (252)
Q Consensus 43 ~~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~---------~~i~~~~~d~~~~~~~~~fDl 111 (252)
......+|.+||=+|+|. | .+ +..+++ .|+ +|++++- .....+..|...+ ...+|+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG--~~--------a~qlak~~Ga-~Vi~~~~~~~~~~~~~lGa~~v~~d~~~v--~~g~Dv 202 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVN--NL--------LTQMLNNAGY-VVDLVSASLSQALAAKRGVRHLYREPSQV--TQKYFA 202 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHH--HH--------HHHHHHHHTC-EEEEECSSCCHHHHHHHTEEEEESSGGGC--CSCEEE
T ss_pred hhcCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCC-EEEEEEChhhHHHHHHcCCCEEEcCHHHh--CCCccE
Confidence 556788999999999943 3 33 334443 676 7888875 1122221232222 467999
Q ss_pred EEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 112 IVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 112 Iv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
|+-... . . .+..+.++|+|+|+++...
T Consensus 203 v~d~~g-----~-~----~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 203 IFDAVN-----S-Q----NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EECC-----------------TTGGGEEEEEEEEEEC
T ss_pred EEECCC-----c-h----hHHHHHHHhcCCCEEEEEe
Confidence 975221 1 1 1245578999999998764
No 353
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=72.77 E-value=9.1 Score=34.17 Aligned_cols=90 Identities=12% Similarity=-0.042 Sum_probs=49.1
Q ss_pred CCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC-----------CceEEEEcccccc-------C
Q psy9773 45 PNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------LILEVIQNKIENV-------E 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------~~i~~~~~d~~~~-------~ 104 (252)
....+|.+||=+|+|. | .+ +..+++ .|+.+|++++. ..-.++..+-.++ .
T Consensus 209 ~~~~~g~~VlV~GaG~vG--~~--------aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t 278 (404)
T 3ip1_A 209 GGIRPGDNVVILGGGPIG--LA--------AVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYT 278 (404)
T ss_dssp CCCCTTCEEEEECCSHHH--HH--------HHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHh
Confidence 3678899999999853 3 33 344444 67668999987 1112221111111 1
Q ss_pred CCCceeEEEecccccccCCh-hhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 LPEKVDIIVSEWMGFYLLHE-SMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ~~~~fDlIv~~~~~~~l~~~-~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
....+|+|+-... .. ..+..++..+.+.++++|+++....
T Consensus 279 ~g~g~D~vid~~g-----~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 279 NGLGAKLFLEATG-----VPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp TTCCCSEEEECSS-----CHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCCCCEEEECCC-----CcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 1136999975221 11 1223333333355599999987653
No 354
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=72.19 E-value=9.2 Score=33.23 Aligned_cols=88 Identities=18% Similarity=0.072 Sum_probs=50.6
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHH-HhhcCCCcEEEeeC-----------CceEEEEccccccC----
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSF-CTKVHPLDHYAPQY-----------LILEVIQNKIENVE---- 104 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~-~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~~---- 104 (252)
+.+.....+|.+||-.|++.|--.+ ... +...|+ +|++++. ..-.++..+ .++.
T Consensus 151 l~~~~~~~~g~~VlV~Gasg~iG~~--------~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~ 220 (342)
T 4eye_A 151 YARRGQLRAGETVLVLGAAGGIGTA--------AIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVR 220 (342)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHH--------HHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCCHHHHH--------HHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHH
Confidence 4344678899999999984331133 333 334675 7998887 111222222 1111
Q ss_pred --CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 105 --LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 105 --~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.. ..+|+|+.... . . .+..+.+.|+++|+++...
T Consensus 221 ~~~~~~g~Dvvid~~g-~-----~----~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 221 EATGGAGVDMVVDPIG-G-----P----AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp HHTTTSCEEEEEESCC------------CHHHHHHTEEEEEEEEEC-
T ss_pred HHhCCCCceEEEECCc-h-----h----HHHHHHHhhcCCCEEEEEE
Confidence 11 36999986332 1 1 3455668899999998764
No 355
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=71.38 E-value=26 Score=31.09 Aligned_cols=81 Identities=10% Similarity=0.133 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEe-eC------------------CceEEEEccccccCCCCce
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAP-QY------------------LILEVIQNKIENVELPEKV 109 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gv-D~------------------~~i~~~~~d~~~~~~~~~f 109 (252)
.+.+||.++.+.| .+ ++.++..+ ++.+ |- ..+++... .. ..+..|
T Consensus 38 ~~~~~~~~~d~~g--al--------~~~~~~~~---~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~--~~~~~~ 101 (375)
T 4dcm_A 38 IRGPVLILNDAFG--AL--------SCALAEHK---PYSIGDSYISELATRENLRLNGIDESSVKFLDS-TA--DYPQQP 101 (375)
T ss_dssp CCSCEEEECCSSS--HH--------HHHTGGGC---CEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TS--CCCSSC
T ss_pred CCCCEEEECCCCC--HH--------HHhhccCC---ceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-cc--ccccCC
Confidence 5578999999999 65 55544332 2333 43 12444321 11 223679
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
|+|+..+. .+...+...|..+...|+||+.+++...
T Consensus 102 ~~v~~~lp----k~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 102 GVVLIKVP----KTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp SEEEEECC----SCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred CEEEEEcC----CCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 99977442 4446788889999999999999986553
No 356
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=71.36 E-value=9.2 Score=33.54 Aligned_cols=88 Identities=16% Similarity=0.071 Sum_probs=51.2
Q ss_pred HHhCCCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC-----------CceEEEEcccccc----
Q psy9773 41 ICDNPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------LILEVIQNKIENV---- 103 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------~~i~~~~~d~~~~---- 103 (252)
+.......+|.+||-+|+|. | .+ +..+++ .|+ +|++++. ..-.++..+..++
T Consensus 181 l~~~~~~~~g~~VlV~G~G~vG--~~--------a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v 249 (363)
T 3uog_A 181 LVEKGHLRAGDRVVVQGTGGVA--LF--------GLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLEEDWVERV 249 (363)
T ss_dssp HTTTTCCCTTCEEEEESSBHHH--HH--------HHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHH
Confidence 43446788999999999764 3 33 333334 665 7999987 1112222111111
Q ss_pred ---CCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 ---ELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 ---~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.....+|+|+-... .. .+..+.+.|+|+|+++....
T Consensus 250 ~~~~~g~g~D~vid~~g------~~----~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 250 YALTGDRGADHILEIAG------GA----GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp HHHHTTCCEEEEEEETT------SS----CHHHHHHHEEEEEEEEEECC
T ss_pred HHHhCCCCceEEEECCC------hH----HHHHHHHHhhcCCEEEEEec
Confidence 01137999976321 11 24455678899999987643
No 357
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=71.27 E-value=11 Score=32.59 Aligned_cols=90 Identities=14% Similarity=0.045 Sum_probs=50.9
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHH-HhhcCCCcEEEeeC-----------CceEEEEcccccc-----
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSF-CTKVHPLDHYAPQY-----------LILEVIQNKIENV----- 103 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~-~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~----- 103 (252)
+.......+|.+||-+|++.|--.. ... +...|+ +|++++. ..-.++..+-.++
T Consensus 140 l~~~~~~~~g~~vlV~Ga~g~iG~~--------~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~ 210 (334)
T 3qwb_A 140 TNEAYHVKKGDYVLLFAAAGGVGLI--------LNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVL 210 (334)
T ss_dssp HHTTSCCCTTCEEEESSTTBHHHHH--------HHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHH
T ss_pred HHHhccCCCCCEEEEECCCCHHHHH--------HHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHH
Confidence 3344567899999999954331133 333 334665 7999888 1111221111111
Q ss_pred --CCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 --ELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 --~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.....+|+|+.... . ..+..+.+.|+|+|+++....
T Consensus 211 ~~~~~~g~D~vid~~g-~---------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 211 KFTNGKGVDASFDSVG-K---------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp HHTTTSCEEEEEECCG-G---------GGHHHHHHHEEEEEEEEECCC
T ss_pred HHhCCCCceEEEECCC-h---------HHHHHHHHHhccCCEEEEEcC
Confidence 11146999986331 1 235556688899999987643
No 358
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=70.87 E-value=6.6 Score=40.18 Aligned_cols=90 Identities=17% Similarity=0.098 Sum_probs=57.3
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC-----------CceEEEEccccccCCC--CceeEE
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY-----------LILEVIQNKIENVELP--EKVDII 112 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~-----------~~i~~~~~d~~~~~~~--~~fDlI 112 (252)
...+.++||+|+|.=+=.| .-.++ ..|+.+|+ ..-.|++.|......- ..+|.+
T Consensus 819 ~~~~~~~lDlGTGPE~RiL------------sLiP~~~pvtm~D~RP~ae~~~~w~~~T~f~~~DyL~~~~~~~~~~D~v 886 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKIL------------ELIPATSPVTCVDIRPTAQPSGCWNVRTTFLELDYLSDGWITGVRGDIV 886 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGG------------GTSCTTSCEEEEESSCCCSCSTTBSSCEEEEESCTTSSSCGGGCCCSEE
T ss_pred ecccceEEEccCCCcceee------------eecCCCCceEEecccCchhhhccccccceeeEccccccceeecCCCcEE
Confidence 4677899999999873233 22333 47999999 4578999998766543 679999
Q ss_pred Eeccccccc--CChhhHHHHHHHHhccccCCe--EEEeec
Q psy9773 113 VSEWMGFYL--LHESMIDSVIFARDKFLKPEG--VMYPYK 148 (252)
Q Consensus 113 v~~~~~~~l--~~~~~~~~~l~~l~~~LkpgG--~lv~~~ 148 (252)
.|...+... ...-++...+.++.+.+.+.| .+++.-
T Consensus 887 t~i~SLGAA~A~a~~tl~~~~~q~l~~~~~~~~~~l~lQl 926 (1289)
T 1ej6_A 887 TCMLSLGAAAAGKSMTFDAAFQQLIKVLSKSTANVVLVQV 926 (1289)
T ss_dssp EECSCHHHHHHHHTCCHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EEEeechhhhhccCCcHHHHHHHHHHHHHhcCccEEEEEe
Confidence 994433211 011156667777767666644 344443
No 359
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=70.56 E-value=15 Score=27.85 Aligned_cols=89 Identities=10% Similarity=0.024 Sum_probs=49.5
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------C---ceEEEEccccccC----CC-Cce
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------L---ILEVIQNKIENVE----LP-EKV 109 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------~---~i~~~~~d~~~~~----~~-~~f 109 (252)
...++.+|+=+|||.=+..+ +..+...| .+|+++|. . .+.++.+|..+.. .. ..+
T Consensus 15 ~~~~~~~v~IiG~G~iG~~l--------a~~L~~~g-~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLI--------ANLASSSG-HSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp --CCCCEEEEECCSHHHHHH--------HHHHHHTT-CEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGC
T ss_pred cccCCCcEEEECCCHHHHHH--------HHHHHhCC-CeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccC
Confidence 35667899999998643444 45555566 47888887 1 2445556654321 11 468
Q ss_pred eEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
|+|+... ... .....+..+.+.+.|...++....
T Consensus 86 d~Vi~~~-----~~~-~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 86 DMVFAFT-----NDD-STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp SEEEECS-----SCH-HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred CEEEEEe-----CCc-HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 9988732 122 233333344455566666665543
No 360
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=69.13 E-value=10 Score=33.01 Aligned_cols=86 Identities=20% Similarity=0.116 Sum_probs=49.2
Q ss_pred CCCCCCCCEEEEEcCCc-CchhhhhccCccchHH-HhhcCCCcEEEeeC-----------CceEEEEcccccc-------
Q psy9773 44 NPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSF-CTKVHPLDHYAPQY-----------LILEVIQNKIENV------- 103 (252)
Q Consensus 44 ~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~-~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~------- 103 (252)
.... +|.+||-+|+|. | .+ ... +...|+.+|++++. ..-.++..+-.++
T Consensus 163 ~~~~-~g~~VlV~GaG~vG--~~--------~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~ 231 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLG--LL--------GIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDI 231 (348)
T ss_dssp TSCC-TTCCEEEECCSHHH--HH--------HHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHH
T ss_pred hcCC-CCCEEEEECCCHHH--HH--------HHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHH
Confidence 3556 899999999953 3 33 333 33467657999987 1111221111111
Q ss_pred CCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 ELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 ~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.....+|+|+.... . ...+..+.+.|+++|+++....
T Consensus 232 ~~g~g~D~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 232 TDGNGVDVFLEFSG-----A----PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp TTTSCEEEEEECSC-----C----HHHHHHHHHHEEEEEEEEECCC
T ss_pred cCCCCCCEEEECCC-----C----HHHHHHHHHHHhcCCEEEEEcc
Confidence 01136999976321 1 1345666788899999987643
No 361
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=69.10 E-value=16 Score=30.59 Aligned_cols=95 Identities=16% Similarity=0.015 Sum_probs=56.9
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCC----
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVEL---- 105 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~---- 105 (252)
...++++|=.|++.| += --++..+++.|+ +|+.++. .++.++.+|+.+...
T Consensus 28 ~l~gk~~lVTGas~G--IG-----~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~ 99 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRG--IG-----AAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQA 99 (271)
T ss_dssp CCTTCEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCCCCEEEEeCCCcH--HH-----HHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 467889999998877 21 112455666775 5777654 357788999977531
Q ss_pred -C------CceeEEEecccccccC-----Chhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 106 -P------EKVDIIVSEWMGFYLL-----HESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 -~------~~fDlIv~~~~~~~l~-----~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
. +..|++|.+-...... ...+ ...+++.+.+.|+++|.++....
T Consensus 100 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 100 IRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 0 4789998843211110 1111 22345556677777888776543
No 362
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=68.93 E-value=15 Score=32.39 Aligned_cols=87 Identities=15% Similarity=0.171 Sum_probs=49.4
Q ss_pred CC-CCCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC----------Cce-EEEEcc---ccc------
Q psy9773 45 PN-IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LIL-EVIQNK---IEN------ 102 (252)
Q Consensus 45 ~~-~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i-~~~~~d---~~~------ 102 (252)
.. ..+|.+||-+|+|.=+ .+ +..+++ .|+.+|++++. ... .++..+ -.+
T Consensus 190 ~~~~~~g~~VlV~GaG~vG-~~--------aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLG-LF--------GVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIM 260 (380)
T ss_dssp CSSCCBTCEEEEECCSHHH-HH--------HHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHH
T ss_pred cCCCCCCCEEEEECcCHHH-HH--------HHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHH
Confidence 56 7889999999965311 33 334444 66557999986 111 222221 001
Q ss_pred -cCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 103 -VELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 103 -~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+.....+|+|+-... .. ..+..+.++|+++|+++....
T Consensus 261 ~~~~g~g~Dvvid~~g-----~~----~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 261 DITHGRGADFILEATG-----DS----RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHTTTSCEEEEEECSS-----CT----THHHHHHHHEEEEEEEEECCC
T ss_pred HHhCCCCCcEEEECCC-----CH----HHHHHHHHHHhcCCEEEEEec
Confidence 111136999976221 11 234556688899999987543
No 363
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=68.88 E-value=12 Score=39.25 Aligned_cols=57 Identities=19% Similarity=0.173 Sum_probs=37.6
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC------------CceEEEEcccccc------------
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY------------LILEVIQNKIENV------------ 103 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~------------~~i~~~~~d~~~~------------ 103 (252)
...++|||.||.| -+ ++-+...|. ..+.++|+ +...++.+|+..+
T Consensus 850 ~~l~viDLFsG~G--Gl--------slGfe~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~ 919 (1330)
T 3av4_A 850 PKLRTLDVFSGCG--GL--------SEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNS 919 (1330)
T ss_dssp CCEEEEEETCTTS--HH--------HHHHHHTTSEEEEEEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCS
T ss_pred CCceEEecccCcc--HH--------HHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhh
Confidence 3468999999999 44 445555665 45789998 3445666665422
Q ss_pred ---CCC--CceeEEEec
Q psy9773 104 ---ELP--EKVDIIVSE 115 (252)
Q Consensus 104 ---~~~--~~fDlIv~~ 115 (252)
.++ +.+|+|+..
T Consensus 920 ~~~~lp~~~~vDvl~GG 936 (1330)
T 3av4_A 920 LGQRLPQKGDVEMLCGG 936 (1330)
T ss_dssp SCCBCCCTTTCSEEEEC
T ss_pred hhhhccccCccceEEec
Confidence 112 468999973
No 364
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=68.70 E-value=12 Score=36.62 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=21.5
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhc----CCCcEEEeeC
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKV----HPLDHYAPQY 90 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~----g~~~v~gvD~ 90 (252)
..+||||.||.|+..+ .+..+-. +..-+.++|+
T Consensus 212 ~ltvIDLFAG~GGls~--------Gfe~AG~~~~~~f~vv~AvE~ 248 (784)
T 4ft4_B 212 TATLLDLYSGCGGMST--------GLCLGAALSGLKLETRWAVDF 248 (784)
T ss_dssp EEEEEEETCTTSHHHH--------HHHHHHHHHTEEEEEEEEEES
T ss_pred CCeEEEeCcCccHHHH--------HHHHhCcccCCceeEEEEEeC
Confidence 3689999999996655 4433320 1345778888
No 365
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=68.57 E-value=5.2 Score=34.67 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=46.5
Q ss_pred CccchHHHhhcCCCcEEEeeC-------CceEEEEc-ccc--------ccCCC---CceeEEEecccccccCC-------
Q psy9773 70 GVDHHSFCTKVHPLDHYAPQY-------LILEVIQN-KIE--------NVELP---EKVDIIVSEWMGFYLLH------- 123 (252)
Q Consensus 70 ~v~~s~~~a~~g~~~v~gvD~-------~~i~~~~~-d~~--------~~~~~---~~fDlIv~~~~~~~l~~------- 123 (252)
+-+...++.+.....|..+-- .+|+++.- ... ++-+| +.||+|+++.-..+-.|
T Consensus 154 ~~~~e~f~~k~~g~~vL~Vse~~~~~p~krv~wiaP~~~~gad~~~~L~lG~P~~~grYDlVfvNv~TpyR~HHYQQCeD 233 (324)
T 3trk_A 154 GERMEWLVNKINGHHVLLVSGYNLALPTKRVTWVAPLGVRGADYTYNLELGLPATLGRYDLVVINIHTPFRIHHYQQCVD 233 (324)
T ss_dssp CCCTHHHHTTSCCSEEEEEESSCCCCTTSEEEEEEETTCSSCSEEECGGGCCCGGGCCEEEEEEECCCCCCSSHHHHHHH
T ss_pred CccHHHHHhhcCCceEEEeecccccCCcceeeeecCCCCCCcceeeccccCCCCcCCceeEEEEecCCccccchHHHHHH
Confidence 555666666654455555533 56666541 111 12223 88999999543322211
Q ss_pred -hhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 124 -ESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 124 -~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.-.+..+-....+.|+|||.+++...
T Consensus 234 HA~~l~mL~~~al~~L~pGGtlv~~aY 260 (324)
T 3trk_A 234 HAMKLQMLGGDSLRLLKPGGSLLIRAY 260 (324)
T ss_dssp HHHHHHHHHHHGGGGEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEee
Confidence 11345555667899999999998764
No 366
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=68.33 E-value=17 Score=31.57 Aligned_cols=90 Identities=17% Similarity=0.122 Sum_probs=49.8
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEccccccC-----
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENVE----- 104 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~~----- 104 (252)
+.......++.+||-.|++.|--.. ....+...|+ +|++++. ..-.++..+-.++.
T Consensus 159 l~~~~~~~~g~~VlV~Gg~g~iG~~-------~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~ 230 (353)
T 4dup_A 159 LFQMAGLTEGESVLIHGGTSGIGTT-------AIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKA 230 (353)
T ss_dssp HTTTTCCCTTCEEEESSTTSHHHHH-------HHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCCHHHHH-------HHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHH
Confidence 4344677899999999643331133 0233444675 6999986 11112211111110
Q ss_pred -CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 105 -LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 105 -~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
....+|+|+.... . . .+..+.+.|+++|+++...
T Consensus 231 ~~~~g~Dvvid~~g-~-----~----~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 231 ETGQGVDIILDMIG-A-----A----YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp HHSSCEEEEEESCC-G-----G----GHHHHHHTEEEEEEEEECC
T ss_pred HhCCCceEEEECCC-H-----H----HHHHHHHHhccCCEEEEEE
Confidence 0246999987332 1 1 3455568899999998764
No 367
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=67.89 E-value=9.8 Score=33.22 Aligned_cols=86 Identities=16% Similarity=0.097 Sum_probs=50.4
Q ss_pred CCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC------------CceEEEEccc---ccc----
Q psy9773 45 PNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY------------LILEVIQNKI---ENV---- 103 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~------------~~i~~~~~d~---~~~---- 103 (252)
....+|.+||=+|+|. | .+ +..+++ .|++.|++++. ..+-....+. .++
T Consensus 175 ~~~~~g~~VlV~GaG~vG--~~--------aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v 244 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIG--LI--------TMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKI 244 (363)
T ss_dssp HTCCTTCCEEEECCSHHH--HH--------HHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHH
Confidence 4678899999999854 3 33 344444 67766999987 1111111110 011
Q ss_pred ---CCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 ---ELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 ---~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.....+|+|+-... . ...+..+.++|+++|+++....
T Consensus 245 ~~~t~g~g~Dvvid~~g-----~----~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 245 VESFGGIEPAVALECTG-----V----ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp HHHTSSCCCSEEEECSC-----C----HHHHHHHHHHSCTTCEEEECCC
T ss_pred HHHhCCCCCCEEEECCC-----C----hHHHHHHHHHhcCCCEEEEEcc
Confidence 11246999976221 1 1245666788999999987653
No 368
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=67.87 E-value=12 Score=32.82 Aligned_cols=84 Identities=23% Similarity=0.177 Sum_probs=48.7
Q ss_pred CCCCCCCEEEEEcC--CcCchhhhhccCccchHH-HhhcCCCcEEEeeC----------Cce-EEEEccccccC------
Q psy9773 45 PNIFAGKTVLDVGT--GTGKSILLQGHGVDHHSF-CTKVHPLDHYAPQY----------LIL-EVIQNKIENVE------ 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGc--GtG~~~ll~~~~v~~s~~-~a~~g~~~v~gvD~----------~~i-~~~~~d~~~~~------ 104 (252)
....+|.+||-+|+ |.| .. ... +...|+ +|++++. ... .++..+-.++.
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG--~~--------~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~ 227 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTG--QF--------AMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQE 227 (362)
T ss_dssp TCCCTTCEEEETTTTBTTH--HH--------HHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred cCCCCCCEEEEeCCCcHHH--HH--------HHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHh
Confidence 46778999999994 344 33 333 334665 6999887 111 12211111110
Q ss_pred CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
....+|+|+.... . ..+..+.+.|+++|+++....
T Consensus 228 ~~~g~D~vid~~g-----~-----~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 228 YPEGVDVVYESVG-----G-----AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp CTTCEEEEEECSC-----T-----HHHHHHHHHEEEEEEEEECCC
T ss_pred cCCCCCEEEECCC-----H-----HHHHHHHHHHhcCCEEEEEeC
Confidence 1146999976321 1 245666788999999987543
No 369
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=67.62 E-value=15 Score=31.90 Aligned_cols=86 Identities=17% Similarity=0.113 Sum_probs=51.1
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC-----------CceEEEEccccccC--------
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY-----------LILEVIQNKIENVE-------- 104 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~-----------~~i~~~~~d~~~~~-------- 104 (252)
....++.+||-.|+|+|--.. ....+... |+ +|++++. ..-.++ |..+..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~-------~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTM-------AVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVI--NASMQDPLAEIRRI 235 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHH-------HHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCccHHHH-------HHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEe--cCCCccHHHHHHHH
Confidence 567889999999998552133 12333445 75 6999987 111122 221111
Q ss_pred CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.. +.+|+|+.... . ...+..+.++|+|+|+++....
T Consensus 236 ~~~~~~d~vi~~~g-----~----~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 236 TESKGVDAVIDLNN-----S----EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp TTTSCEEEEEESCC-----C----HHHHTTGGGGEEEEEEEEECCS
T ss_pred hcCCCceEEEECCC-----C----HHHHHHHHHHHhcCCEEEEECC
Confidence 11 46999976321 1 2356677799999999987543
No 370
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=67.43 E-value=16 Score=28.29 Aligned_cols=86 Identities=10% Similarity=-0.031 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhc-CCCcEEEeeC----------CceEEEEcccccc----CC-C-Ccee
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKV-HPLDHYAPQY----------LILEVIQNKIENV----EL-P-EKVD 110 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~-g~~~v~gvD~----------~~i~~~~~d~~~~----~~-~-~~fD 110 (252)
..+.+|+=+|||.=+..+ +..+... | ..|+++|. ..+.++.+|..+. .. . ..+|
T Consensus 37 ~~~~~v~IiG~G~~G~~~--------a~~L~~~~g-~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad 107 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGA--------YDELRARYG-KISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVK 107 (183)
T ss_dssp CTTCSEEEECCSHHHHHH--------HHHHHHHHC-SCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCC
T ss_pred CCCCcEEEECCCHHHHHH--------HHHHHhccC-CeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCC
Confidence 345689999988644444 4555556 6 46999988 3466777777543 11 2 4689
Q ss_pred EEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 111 IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 111 lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+|++.. .+......++. ..+.+.|++.++...
T Consensus 108 ~vi~~~-----~~~~~~~~~~~-~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 108 LVLLAM-----PHHQGNQTALE-QLQRRNYKGQIAAIA 139 (183)
T ss_dssp EEEECC-----SSHHHHHHHHH-HHHHTTCCSEEEEEE
T ss_pred EEEEeC-----CChHHHHHHHH-HHHHHCCCCEEEEEE
Confidence 888722 22222223333 345667777777643
No 371
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=67.00 E-value=17 Score=31.64 Aligned_cols=89 Identities=13% Similarity=0.088 Sum_probs=50.3
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccCC-----
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVEL----- 105 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~----- 105 (252)
+.......++.+||-.|++.|--.. ....+...|+ +|++++. ...... .|..+...
T Consensus 162 l~~~~~~~~g~~vlV~GasggiG~~-------~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~-~d~~~~~~~~~~~ 232 (351)
T 1yb5_A 162 LIHSACVKAGESVLVHGASGGVGLA-------ACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEV-FNHREVNYIDKIK 232 (351)
T ss_dssp HHTTSCCCTTCEEEEETCSSHHHHH-------HHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEE-EETTSTTHHHHHH
T ss_pred HHHhhCCCCcCEEEEECCCChHHHH-------HHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEE-EeCCCchHHHHHH
Confidence 3334567889999999984431132 0233444665 6988886 111111 12221110
Q ss_pred ----CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 106 ----PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 106 ----~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
...+|+|+.... . ..+....++|+|+|+++...
T Consensus 233 ~~~~~~~~D~vi~~~G--------~--~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 233 KYVGEKGIDIIIEMLA--------N--VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHHCTTCEEEEEESCH--------H--HHHHHHHHHEEEEEEEEECC
T ss_pred HHcCCCCcEEEEECCC--------h--HHHHHHHHhccCCCEEEEEe
Confidence 136999976321 1 13455678899999998765
No 372
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=66.78 E-value=46 Score=27.23 Aligned_cols=90 Identities=10% Similarity=-0.120 Sum_probs=50.9
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccCCCCceeEEEecccccc
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVELPEKVDIIVSEWMGFY 120 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~~~~fDlIv~~~~~~~ 120 (252)
++||=.|| | .+ |-.+...+...| .+|++++. .++.++.+|+.++. -..+|+||......
T Consensus 6 ~~ilVtGa--G--~i----G~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-~~~~d~vi~~a~~~- 74 (286)
T 3ius_A 6 GTLLSFGH--G--YT----ARVLSRALAPQG-WRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-LDGVTHLLISTAPD- 74 (286)
T ss_dssp CEEEEETC--C--HH----HHHHHHHHGGGT-CEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-CTTCCEEEECCCCB-
T ss_pred CcEEEECC--c--HH----HHHHHHHHHHCC-CEEEEEEcChhhhhhHhhCCCeEEEecccccc-cCCCCEEEECCCcc-
Confidence 58999996 5 22 111134444555 46888877 56889999998876 46789998733211
Q ss_pred cCChhhHHHHHHHHhcc-ccCCeEEEeecccc
Q psy9773 121 LLHESMIDSVIFARDKF-LKPEGVMYPYKCIL 151 (252)
Q Consensus 121 l~~~~~~~~~l~~l~~~-LkpgG~lv~~~~~~ 151 (252)
....+....++..+.+. -+..-++++++...
T Consensus 75 ~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~v 106 (286)
T 3ius_A 75 SGGDPVLAALGDQIAARAAQFRWVGYLSTTAV 106 (286)
T ss_dssp TTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGG
T ss_pred ccccHHHHHHHHHHHhhcCCceEEEEeeccee
Confidence 11222334555555443 12233444554443
No 373
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=66.13 E-value=15 Score=31.91 Aligned_cols=87 Identities=14% Similarity=0.145 Sum_probs=50.2
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEcccccc-CC--------
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENV-EL-------- 105 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~-~~-------- 105 (252)
....++.+||-+|++.|--.. ....+...|+ +|++++. ...... .|..+. ..
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~-------~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~ 235 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSL-------AVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVF-IDFTKEKDIVGAVLKAT 235 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHH-------HHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEE-EETTTCSCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHH-------HHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceE-EecCccHhHHHHHHHHh
Confidence 367889999999984331133 0233344665 7888886 111111 133211 10
Q ss_pred CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+.+|+|+.... ....+..+.+.|+++|+++....
T Consensus 236 ~~~~D~vi~~~g---------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 236 DGGAHGVINVSV---------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp TSCEEEEEECSS---------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred CCCCCEEEECCC---------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 026999977331 12356777899999999987543
No 374
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=65.50 E-value=17 Score=31.45 Aligned_cols=85 Identities=15% Similarity=0.151 Sum_probs=48.9
Q ss_pred CCCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeCC--------c-eEEEEccccccCC-------
Q psy9773 44 NPNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQYL--------I-LEVIQNKIENVEL------- 105 (252)
Q Consensus 44 ~~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~~--------~-i~~~~~d~~~~~~------- 105 (252)
.... +|.+||-+|+|. | .+ ...+++ .|+.+|++++.. . ... ..|..+..+
T Consensus 160 ~~~~-~g~~VlV~GaG~vG--~~--------~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~-v~~~~~~~~~~~~~~~ 227 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIG--LM--------AAMVVRASGAGPILVSDPNPYRLAFARPYADR-LVNPLEEDLLEVVRRV 227 (343)
T ss_dssp TTCC-TTSCEEEECCSHHH--HH--------HHHHHHHTTCCSEEEECSCHHHHGGGTTTCSE-EECTTTSCHHHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHH--HH--------HHHHHHHcCCCEEEEECCCHHHHHHHHHhHHh-ccCcCccCHHHHHHHh
Confidence 3556 899999999843 3 33 333333 676579999871 1 111 112211110
Q ss_pred -CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 -PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 -~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
...+|+|+-... . ...+..+.++|+++|+++....
T Consensus 228 ~~~g~D~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 228 TGSGVEVLLEFSG-----N----EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HSSCEEEEEECSC-----C----HHHHHHHHHHEEEEEEEEECCC
T ss_pred cCCCCCEEEECCC-----C----HHHHHHHHHHHhcCCEEEEEec
Confidence 236999976221 1 1345666788899999987643
No 375
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=65.34 E-value=19 Score=29.63 Aligned_cols=94 Identities=10% Similarity=0.058 Sum_probs=58.0
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCCC--------
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVELP-------- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~~-------- 106 (252)
..++++|=.|++.| += --++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 6 l~gk~~lVTGas~g--IG-----~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 6 YQGKKAIVIGGTHG--MG-----LATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTTCEEEEETCSSH--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH--HH-----HHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHH
Confidence 56789999998877 21 112455666775 6888887 3678899999776321
Q ss_pred ---CceeEEEecccccccC-----Chhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 107 ---EKVDIIVSEWMGFYLL-----HESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ---~~fDlIv~~~~~~~l~-----~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+..|++|.+-...... ...+ ...+++.+.+.++.+|.++....
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 5799998843211110 1112 22344556677777888876544
No 376
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=64.71 E-value=5.5 Score=34.62 Aligned_cols=83 Identities=13% Similarity=0.055 Sum_probs=48.0
Q ss_pred CCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-c--CCCcEEEeeC-----------CceEEEEc----cc-cccCC
Q psy9773 46 NIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-V--HPLDHYAPQY-----------LILEVIQN----KI-ENVEL 105 (252)
Q Consensus 46 ~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~--g~~~v~gvD~-----------~~i~~~~~----d~-~~~~~ 105 (252)
.. +|.+||-+|+|. | .+ ...+++ . |+ +|++++. ..-.++.. +. ..+..
T Consensus 168 ~~-~g~~VlV~GaG~vG--~~--------aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~ 235 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLA--VY--------TIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTD 235 (344)
T ss_dssp TC-SSCEEEEECCSHHH--HH--------HHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHT
T ss_pred CC-CCCEEEEECCCHHH--HH--------HHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhc
Confidence 45 899999999863 3 33 344444 5 75 5999986 11122211 10 01111
Q ss_pred CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
...+|+|+-... . ...+..+.++|+|+|+++....
T Consensus 236 g~g~D~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 236 GLGASIAIDLVG-----T----EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp TCCEEEEEESSC-----C----HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCccEEEECCC-----C----hHHHHHHHHHhhcCCEEEEeCC
Confidence 136999976321 1 1245666788999999987543
No 377
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=64.52 E-value=57 Score=26.59 Aligned_cols=94 Identities=9% Similarity=-0.008 Sum_probs=57.5
Q ss_pred CCCCEEEEEcCC--cCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC--
Q psy9773 48 FAGKTVLDVGTG--TGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP-- 106 (252)
Q Consensus 48 ~~~~~VLDlGcG--tG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~-- 106 (252)
..++++|=.|++ +| += -.++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 5 l~~k~vlVTGasg~~G--IG-----~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 76 (266)
T 3oig_A 5 LEGRNIVVMGVANKRS--IA-----WGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIET 76 (266)
T ss_dssp CTTCEEEEECCCSTTS--HH-----HHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHH
T ss_pred cCCCEEEEEcCCCCCc--HH-----HHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHH
Confidence 467899999987 45 21 111455666775 5887765 2688999999876311
Q ss_pred ---------CceeEEEecccccc-------c--CChhhH-----------HHHHHHHhccccCCeEEEeecc
Q psy9773 107 ---------EKVDIIVSEWMGFY-------L--LHESMI-----------DSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ---------~~fDlIv~~~~~~~-------l--~~~~~~-----------~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+..|++|.+-.... + .....+ ..+++.+.+.|+++|.++....
T Consensus 77 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 77 CFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 47899887432111 0 111122 2355666778888888886554
No 378
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=63.36 E-value=18 Score=30.77 Aligned_cols=95 Identities=13% Similarity=0.015 Sum_probs=59.4
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCCC-------
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVELP------- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~~------- 106 (252)
...|+++|=-|+++| += --++..+++.|+ +|+.++. .++..+++|+.+...-
T Consensus 26 rL~gKvalVTGas~G--IG-----~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 26 RLNAKIAVITGATSG--IG-----LAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp TTTTCEEEEESCSSH--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred hhCCCEEEEeCcCCH--HH-----HHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHH
Confidence 367899999999888 31 122555677775 6888887 4677888998766311
Q ss_pred ----CceeEEEecccccccC-----Chhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 107 ----EKVDIIVSEWMGFYLL-----HESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ----~~fDlIv~~~~~~~l~-----~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+..|++|.+-...... ...+ ...+.+.+.+.|+.+|.++....
T Consensus 98 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS 160 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS 160 (273)
T ss_dssp HHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence 6899998843221110 1112 23344555677888777765543
No 379
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=63.14 E-value=12 Score=32.74 Aligned_cols=86 Identities=20% Similarity=0.138 Sum_probs=48.2
Q ss_pred CCCCCCCEEEEEcCCc-CchhhhhccCccchHHHh-hcCCCcEEEeeC-----------CceEEEEcccc-cc--CCCCc
Q psy9773 45 PNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCT-KVHPLDHYAPQY-----------LILEVIQNKIE-NV--ELPEK 108 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a-~~g~~~v~gvD~-----------~~i~~~~~d~~-~~--~~~~~ 108 (252)
....+|.+||-+|+|. | .+ ...++ ..|+ +|++++. ..-.++...-. ++ ...+.
T Consensus 175 ~~~~~g~~VlV~GaG~vG--~~--------~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~ 243 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIG--SM--------GTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDT 243 (360)
T ss_dssp TTCSTTCEEEEECCSHHH--HH--------HHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSC
T ss_pred cCCCCCCEEEEECCCHHH--HH--------HHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcC
Confidence 5678899999999853 3 33 33333 3676 5999986 11112211111 11 01147
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+|+|+..... . .. ..+..+.++|+++|+++...
T Consensus 244 ~D~vid~~g~--~-~~----~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 244 FDLIVVCASS--L-TD----IDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEEEECCSC--S-TT----CCTTTGGGGEEEEEEEEECC
T ss_pred CCEEEECCCC--C-cH----HHHHHHHHHhcCCCEEEEec
Confidence 9999863321 0 00 12345568899999998654
No 380
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=63.12 E-value=31 Score=30.35 Aligned_cols=55 Identities=9% Similarity=0.214 Sum_probs=36.8
Q ss_pred ceEEEEccccccC----------CC-CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 92 ILEVIQNKIENVE----------LP-EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 92 ~i~~~~~d~~~~~----------~~-~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+..++.+|+.+.. ++ ...-++++..++.++.. .....+|..+.... |+|.+++..
T Consensus 164 ~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~-~~~~~ll~~ia~~f-~~~~~i~yE 229 (334)
T 3iei_A 164 RYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTP-EQSANLLKWAANSF-ERAMFINYE 229 (334)
T ss_dssp SEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCH-HHHHHHHHHHHHHC-SSEEEEEEE
T ss_pred ceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCH-HHHHHHHHHHHHhC-CCceEEEEe
Confidence 3567888887631 22 45778888888887744 36788888887665 556555443
No 381
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=63.03 E-value=15 Score=27.62 Aligned_cols=84 Identities=7% Similarity=-0.060 Sum_probs=50.8
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC--------------ceEEEEccccccCC----C-Ccee
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL--------------ILEVIQNKIENVEL----P-EKVD 110 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~--------------~i~~~~~d~~~~~~----~-~~fD 110 (252)
..+|+=+|+|.=+..+ ...+...| ..|+.+|.. .+.++.+|..+... . ..+|
T Consensus 3 ~~~vlI~G~G~vG~~l--------a~~L~~~g-~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad 73 (153)
T 1id1_A 3 KDHFIVCGHSILAINT--------ILQLNQRG-QNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCR 73 (153)
T ss_dssp CSCEEEECCSHHHHHH--------HHHHHHTT-CCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCS
T ss_pred CCcEEEECCCHHHHHH--------HHHHHHCC-CCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCC
Confidence 4568888887554444 45555555 468888762 36788888865421 1 5789
Q ss_pred EEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 111 IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 111 lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+|++.. .+ ......+....+.+.|...++...
T Consensus 74 ~vi~~~-----~~-d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 74 AILALS-----DN-DADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp EEEECS-----SC-HHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred EEEEec-----CC-hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 888733 11 223344444556677777776643
No 382
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=62.87 E-value=26 Score=30.06 Aligned_cols=89 Identities=11% Similarity=-0.011 Sum_probs=50.7
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------C-c--eEEEEcccccc-CC---
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------L-I--LEVIQNKIENV-EL--- 105 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------~-~--i~~~~~d~~~~-~~--- 105 (252)
+.+.....+|.+||-.||+.|--.. ....+...|+ +|++++. . . ... ..|..+. ..
T Consensus 147 l~~~~~~~~g~~vlI~Ga~g~iG~~-------~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~ 217 (345)
T 2j3h_A 147 FYEVCSPKEGETVYVSAASGAVGQL-------VGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAA 217 (345)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHH-------HHHHHHHTTC-EEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHH
T ss_pred HHHHhCCCCCCEEEEECCCcHHHHH-------HHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHH
Confidence 3344567889999999983331133 0233344665 6888886 1 1 111 1132221 11
Q ss_pred -----CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 106 -----PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 106 -----~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.+.+|+|+.... . ..+..+.++|+++|+++...
T Consensus 218 ~~~~~~~~~d~vi~~~g--------~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 218 LKRCFPNGIDIYFENVG--------G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp HHHHCTTCEEEEEESSC--------H--HHHHHHHTTEEEEEEEEECC
T ss_pred HHHHhCCCCcEEEECCC--------H--HHHHHHHHHHhcCCEEEEEc
Confidence 136999976321 1 25667778999999998754
No 383
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=61.76 E-value=24 Score=30.41 Aligned_cols=86 Identities=13% Similarity=-0.006 Sum_probs=48.5
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC----------ceEEEEccccccC--------CC
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL----------ILEVIQNKIENVE--------LP 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~----------~i~~~~~d~~~~~--------~~ 106 (252)
....++.+||-.|++.|--.. ....+...|+ +|++++.. ....+ .|..+.. ..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~-------~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~-~d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVA-------AIQIAKLFGA-RVIATAGSEDKLRRAKALGADET-VNYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHH-------HHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEE-EETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHH-------HHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEE-EcCCcccHHHHHHHHhC
Confidence 467789999999983331133 0233334665 79888870 11111 1322211 11
Q ss_pred -CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 107 -EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 -~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
..+|+|+.... - . .+..+.++|+++|+++....
T Consensus 233 ~~~~d~vi~~~g---~---~----~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 233 GKGADKVVDHTG---A---L----YFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp TTCEEEEEESSC---S---S----SHHHHHHHEEEEEEEEESSC
T ss_pred CCCceEEEECCC---H---H----HHHHHHHhhccCCEEEEEec
Confidence 36999987331 1 1 24555678899999987643
No 384
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=61.27 E-value=21 Score=30.11 Aligned_cols=94 Identities=17% Similarity=0.115 Sum_probs=56.9
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCC-----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVEL----- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~----- 105 (252)
..+++||=.|++.| += --++..+++.|+ +|+.++. .++.++.+|+.+...
T Consensus 45 l~gk~vlVTGas~G--IG-----~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 116 (291)
T 3ijr_A 45 LKGKNVLITGGDSG--IG-----RAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIV 116 (291)
T ss_dssp TTTCEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCcH--HH-----HHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 46789999998877 21 112445666774 5777765 367888999977531
Q ss_pred C------CceeEEEeccccccc-C-----Chhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 106 P------EKVDIIVSEWMGFYL-L-----HESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ~------~~fDlIv~~~~~~~l-~-----~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
. +..|++|.+-..... . ...+ ...+++.+.+.|+.+|+++....
T Consensus 117 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 117 QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 0 578999874321110 0 1112 23455566777788888776543
No 385
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=60.84 E-value=28 Score=25.02 Aligned_cols=80 Identities=14% Similarity=0.054 Sum_probs=45.5
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEccccccC----C-CCceeEEE
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENVE----L-PEKVDIIV 113 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~~----~-~~~fDlIv 113 (252)
+.+|+=+|+|.=+..+ +..+...| .+|+.+|. ..+.++.+|..+.. . -..+|+|+
T Consensus 4 ~m~i~IiG~G~iG~~~--------a~~L~~~g-~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTL--------AKSLSEKG-HDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECCSHHHHHH--------HHHHHHTT-CEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECCCHHHHHH--------HHHHHhCC-CeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 3678889987644444 45555566 46888887 24556777765431 1 14689988
Q ss_pred ecccccccCChhhHHHHHHHHhccccCCeEE
Q psy9773 114 SEWMGFYLLHESMIDSVIFARDKFLKPEGVM 144 (252)
Q Consensus 114 ~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~l 144 (252)
... ... .....+..+.+.+.++-++
T Consensus 75 ~~~-----~~~-~~~~~~~~~~~~~~~~~ii 99 (140)
T 1lss_A 75 AVT-----GKE-EVNLMSSLLAKSYGINKTI 99 (140)
T ss_dssp ECC-----SCH-HHHHHHHHHHHHTTCCCEE
T ss_pred Eee-----CCc-hHHHHHHHHHHHcCCCEEE
Confidence 732 111 2223344445557776433
No 386
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=60.61 E-value=4.6 Score=31.17 Aligned_cols=39 Identities=15% Similarity=0.054 Sum_probs=27.0
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEe
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYP 146 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~ 146 (252)
.+||+|+...-... ....-...++..+.+.|+|||.|..
T Consensus 58 stYD~V~~lt~~~~-~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 58 AKYETVHYLTPEAQ-TDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp SSCCSEEEECCCSS-CSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred ccccEEEEecCCcc-chhhcCHHHHHHHHHHhCCCCEEEe
Confidence 78999977221110 1112237899999999999999986
No 387
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=60.27 E-value=11 Score=34.27 Aligned_cols=84 Identities=12% Similarity=0.069 Sum_probs=55.4
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccCC----C-CceeEEEe
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVEL----P-EKVDIIVS 114 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~----~-~~fDlIv~ 114 (252)
+.+|+=+|+|.=+..+ +..+...| ..|+++|. ..+.++.+|..+... . ..+|+||+
T Consensus 4 ~~~viIiG~Gr~G~~v--------a~~L~~~g-~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQIT--------GRLLLSSG-VKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECCSHHHHHH--------HHHHHHTT-CCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCeEEEECCCHHHHHH--------HHHHHHCC-CCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 3568899998754555 55666666 56999998 457788999877631 1 57898877
Q ss_pred cccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 115 EWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 115 ~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.. .+. .....+....+.+.|+..++...
T Consensus 75 ~~-----~~~-~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 75 AI-----DDP-QTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp CC-----SSH-HHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CC-----CCh-HHHHHHHHHHHHhCCCCeEEEEE
Confidence 32 222 23334444557788987777654
No 388
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=59.82 E-value=14 Score=32.02 Aligned_cols=79 Identities=20% Similarity=0.188 Sum_probs=44.5
Q ss_pred CCCEEEEEc-CCc-CchhhhhccCccchHH-HhhcCCCcEEEeeC-----------CceEEEEcccccc------CCCCc
Q psy9773 49 AGKTVLDVG-TGT-GKSILLQGHGVDHHSF-CTKVHPLDHYAPQY-----------LILEVIQNKIENV------ELPEK 108 (252)
Q Consensus 49 ~~~~VLDlG-cGt-G~~~ll~~~~v~~s~~-~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~------~~~~~ 108 (252)
+|.+||=+| +|. | .+ +.. +...|+ +|++++. ..-.++..+ .++ .....
T Consensus 150 ~g~~VlV~gg~G~vG--~~--------a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~-~~~~~~~~~~~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVG--SI--------ATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHK-ESLLNQFKTQGIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHH--HH--------HHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTT-SCHHHHHHHHTCCC
T ss_pred CCCEEEEEcCCCHHH--HH--------HHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECC-ccHHHHHHHhCCCC
Confidence 889999995 432 3 33 333 334675 7999987 111122111 011 01146
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+|+|+.... -...+..+.++|+++|+++...
T Consensus 218 ~Dvv~d~~g---------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 218 VDYVFCTFN---------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEEEEESSC---------HHHHHHHHHHHEEEEEEEEESS
T ss_pred ccEEEECCC---------chHHHHHHHHHhccCCEEEEEC
Confidence 999976221 1234566678899999997643
No 389
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=59.50 E-value=23 Score=29.39 Aligned_cols=95 Identities=19% Similarity=0.060 Sum_probs=56.9
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC---
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP--- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~--- 106 (252)
...++++|=.|++.| += --++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 15 ~l~~k~~lVTGas~g--IG-----~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 86 (270)
T 3is3_A 15 RLDGKVALVTGSGRG--IG-----AAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKL 86 (270)
T ss_dssp CCTTCEEEESCTTSH--HH-----HHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred CcCCCEEEEECCCch--HH-----HHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence 456789999998877 21 112455666775 5777654 4578889999876310
Q ss_pred --------CceeEEEecccccccC-----Chhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 107 --------EKVDIIVSEWMGFYLL-----HESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 --------~~fDlIv~~~~~~~l~-----~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+..|++|.+-...... ...+ ...+++.+.+.|+++|.++....
T Consensus 87 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 87 FDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 4789998743221110 1112 22344556677777888876554
No 390
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=59.18 E-value=17 Score=32.90 Aligned_cols=16 Identities=19% Similarity=0.212 Sum_probs=13.0
Q ss_pred CCEEEEEcCCcCchhh
Q psy9773 50 GKTVLDVGTGTGKSIL 65 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~l 65 (252)
..+|||+.||.|+..+
T Consensus 10 ~lrvldLFsGiGG~~~ 25 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFK 25 (403)
T ss_dssp EEEEEEETCTTCHHHH
T ss_pred cceEEEEecCcCHHHH
Confidence 4689999999995555
No 391
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=59.04 E-value=25 Score=30.13 Aligned_cols=90 Identities=11% Similarity=0.089 Sum_probs=50.6
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC----------ceEEEEccccccC------
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL----------ILEVIQNKIENVE------ 104 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~----------~i~~~~~d~~~~~------ 104 (252)
+.......++.+||-.|++.|--.. ....+...|+ +|++++.. ..... .|..+..
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~-------~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~i~ 207 (333)
T 1wly_A 137 LHQTHKVKPGDYVLIHAAAGGMGHI-------MVPWARHLGA-TVIGTVSTEEKAETARKLGCHHT-INYSTQDFAEVVR 207 (333)
T ss_dssp HHTTSCCCTTCEEEETTTTSTTHHH-------HHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHH
T ss_pred HHHhhCCCCCCEEEEECCccHHHHH-------HHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE-EECCCHHHHHHHH
Confidence 3334567889999999964331132 0233444675 79998871 11111 1222211
Q ss_pred ---CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 ---LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ---~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
....+|+++.... . ..+..+.++|+++|+++....
T Consensus 208 ~~~~~~~~d~vi~~~g-~---------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 208 EITGGKGVDVVYDSIG-K---------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HHHTTCCEEEEEECSC-T---------TTHHHHHHTEEEEEEEEECCC
T ss_pred HHhCCCCCeEEEECCc-H---------HHHHHHHHhhccCCEEEEEec
Confidence 0136999986332 1 235566688999999987643
No 392
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=58.89 E-value=34 Score=27.89 Aligned_cols=97 Identities=12% Similarity=0.024 Sum_probs=57.8
Q ss_pred CCCCCCCEEEEEcCC--cCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccccccCCC-
Q psy9773 45 PNIFAGKTVLDVGTG--TGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIENVELP- 106 (252)
Q Consensus 45 ~~~~~~~~VLDlGcG--tG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~~~~~- 106 (252)
.....+++||=.|++ .| += -.++..+++.|+ +|+.++. ..+.++.+|+.+...-
T Consensus 9 ~~~~~~k~vlITGa~~~~g--iG-----~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 80 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRS--IA-----YGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQID 80 (271)
T ss_dssp CCTTTTCEEEECCCCSTTS--HH-----HHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred ccccCCCEEEEeCCCCCCc--HH-----HHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHH
Confidence 345678999999976 45 21 112455666775 6888865 3577889999776310
Q ss_pred ----------CceeEEEeccccccc----------CChhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 107 ----------EKVDIIVSEWMGFYL----------LHESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ----------~~fDlIv~~~~~~~l----------~~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+..|++|.+-..... ....+ ...+++.+.+.|+++|.++....
T Consensus 81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 81 ALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 578999984322110 11112 22345556677777788776543
No 393
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=58.56 E-value=15 Score=31.53 Aligned_cols=87 Identities=9% Similarity=0.023 Sum_probs=49.4
Q ss_pred CCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC----------ceEEEEccccccC---------
Q psy9773 44 NPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL----------ILEVIQNKIENVE--------- 104 (252)
Q Consensus 44 ~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~----------~i~~~~~d~~~~~--------- 104 (252)
.....++++||-.|++.|--.. ....+...|+ +|++++.. ..... .|..+..
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~-------~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLI-------ACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQV-INYREEDLVERLKEIT 205 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHH-------HHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHT
T ss_pred hhCCCCCCEEEEECCCCHHHHH-------HHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEE-EECCCccHHHHHHHHh
Confidence 4567889999999954331122 1233444675 69888871 11111 1222111
Q ss_pred CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
....+|+++.... . ..+..+.++|+++|+++....
T Consensus 206 ~~~~~D~vi~~~g------~----~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 206 GGKKVRVVYDSVG------R----DTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp TTCCEEEEEECSC------G----GGHHHHHHTEEEEEEEEECCC
T ss_pred CCCCceEEEECCc------h----HHHHHHHHHhcCCCEEEEEec
Confidence 0136999987331 1 235566688899999987643
No 394
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=58.46 E-value=48 Score=27.86 Aligned_cols=94 Identities=12% Similarity=0.041 Sum_probs=56.7
Q ss_pred CCCCCEEEEEcCC--cC-chhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccccccCCC--
Q psy9773 47 IFAGKTVLDVGTG--TG-KSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIENVELP-- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcG--tG-~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~~~~~-- 106 (252)
...++++|=.|++ .| +..+ +..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 28 ~l~gk~~lVTGasg~~GIG~ai--------a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 98 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGI--------AKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDA 98 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHH--------HHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHH--------HHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHH
Confidence 4567899999976 34 1122 455666775 5877765 4578889999776310
Q ss_pred ---------CceeEEEecccccc---------cCChhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 107 ---------EKVDIIVSEWMGFY---------LLHESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ---------~~fDlIv~~~~~~~---------l~~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+..|++|.+-.... -....+ ...+++.+.+.|+.+|+++....
T Consensus 99 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 99 VFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 57899988432211 001111 22344555667777888876554
No 395
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=58.34 E-value=30 Score=29.44 Aligned_cols=84 Identities=18% Similarity=0.101 Sum_probs=47.4
Q ss_pred CCCCCCCCEEEEEc-CC-cCchhhhhccCccchHHHhh-cCCCcEEEeeC----------CceEEEEccccc-cCCC-Cc
Q psy9773 44 NPNIFAGKTVLDVG-TG-TGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LILEVIQNKIEN-VELP-EK 108 (252)
Q Consensus 44 ~~~~~~~~~VLDlG-cG-tG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i~~~~~d~~~-~~~~-~~ 108 (252)
.....+|.+||=+| +| .| .+ +..+++ .|+ +|++++. .--.++..+-.+ +... ..
T Consensus 147 ~~~~~~g~~vlV~Ga~G~vG--~~--------a~q~a~~~Ga-~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g 215 (321)
T 3tqh_A 147 QAEVKQGDVVLIHAGAGGVG--HL--------AIQLAKQKGT-TVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTP 215 (321)
T ss_dssp HTTCCTTCEEEESSTTSHHH--HH--------HHHHHHHTTC-EEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSC
T ss_pred hcCCCCCCEEEEEcCCcHHH--HH--------HHHHHHHcCC-EEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccC
Confidence 36788999999997 44 34 33 334444 665 6887765 111122211111 1111 46
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+|+|+-... . .. +..+.++|+++|+++...
T Consensus 216 ~D~v~d~~g------~---~~-~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 216 VDAVIDLVG------G---DV-GIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp EEEEEESSC------H---HH-HHHHGGGEEEEEEEEECC
T ss_pred CCEEEECCC------c---HH-HHHHHHhccCCCEEEEeC
Confidence 999976221 1 12 256679999999998753
No 396
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=58.06 E-value=25 Score=30.45 Aligned_cols=85 Identities=12% Similarity=0.111 Sum_probs=48.7
Q ss_pred CCCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC----------Cce-EEEEccc-ccc-------
Q psy9773 45 PNIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LIL-EVIQNKI-ENV------- 103 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i-~~~~~d~-~~~------- 103 (252)
....+|.+||-+|+|. | .+ ...+++ .|++ |++++. ... .++..+- .++
T Consensus 164 ~~~~~g~~VlV~GaG~vG--~~--------a~qla~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~ 232 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIG--LV--------SVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIER 232 (352)
T ss_dssp HTCCTTCEEEEECCSHHH--HH--------HHHHHHHTTCE-EEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHH
Confidence 4577899999999864 3 33 334443 6654 999886 111 2222110 111
Q ss_pred CC---CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 104 EL---PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 104 ~~---~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.. ...+|+|+-... . ...+..+.++|+|+|+++....
T Consensus 233 ~~~~~g~g~D~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 233 IRSAIGDLPNVTIDCSG-----N----EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHHHSSSCCSEEEECSC-----C----HHHHHHHHHHSCTTCEEEECSC
T ss_pred hccccCCCCCEEEECCC-----C----HHHHHHHHHHHhcCCEEEEEec
Confidence 00 135899976221 1 1245566688999999987643
No 397
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=57.91 E-value=23 Score=29.29 Aligned_cols=94 Identities=15% Similarity=0.060 Sum_probs=56.7
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------------------CceEEEEcc
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------------------LILEVIQNK 99 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------------------~~i~~~~~d 99 (252)
..+++||=.|++.| += -.++..++..|+ +|+.+|. .++.++.+|
T Consensus 8 l~gk~vlVTGas~g--IG-----~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 79 (287)
T 3pxx_A 8 VQDKVVLVTGGARG--QG-----RSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVD 79 (287)
T ss_dssp TTTCEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECC
T ss_pred cCCCEEEEeCCCCh--HH-----HHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEcc
Confidence 46789999998876 21 112455666774 5887753 357788999
Q ss_pred ccccCCC-----------CceeEEEeccccccc---CChhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 100 IENVELP-----------EKVDIIVSEWMGFYL---LHESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 100 ~~~~~~~-----------~~fDlIv~~~~~~~l---~~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+.+...- +..|++|.+-..... ....+ ...+++.+.+.|+.+|.++....
T Consensus 80 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 80 VRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 8766311 478999884322111 11122 23344566777778888776543
No 398
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=57.76 E-value=23 Score=30.51 Aligned_cols=83 Identities=12% Similarity=0.065 Sum_probs=48.2
Q ss_pred CCCCCCEEEEEcCCc-CchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccCCC-------C
Q psy9773 46 NIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVELP-------E 107 (252)
Q Consensus 46 ~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~~-------~ 107 (252)
...++.+||-+|+|. | .+ ...++...|+ +|++++. ...... .|..+.... +
T Consensus 161 ~~~~g~~VlV~GaG~vG--~~-------~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~-~d~~~~~~~~~~~~~~~ 229 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLG--HV-------AVQYAKAMGL-NVVAVDIGDEKLELAKELGADLV-VNPLKEDAAKFMKEKVG 229 (339)
T ss_dssp TCCTTCEEEEECCSTTH--HH-------HHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEE-ECTTTSCHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCHHH--HH-------HHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEE-ecCCCccHHHHHHHHhC
Confidence 577899999999853 3 33 0233334665 7999986 111111 132211110 4
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.+|+|+.... . ...+..+.++|+++|+++...
T Consensus 230 ~~d~vid~~g-----~----~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 230 GVHAAVVTAV-----S----KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp SEEEEEESSC-----C----HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCC-----C----HHHHHHHHHHhhcCCEEEEec
Confidence 6999976321 1 124566678889999998754
No 399
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=57.69 E-value=12 Score=31.41 Aligned_cols=61 Identities=13% Similarity=0.004 Sum_probs=40.5
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEcccccc-CC----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENV-EL---- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~-~~---- 105 (252)
..+++||=.|++.| += -.++..+++.|+ +|+.++. .++.++.+|+.+. ..
T Consensus 10 ~~~k~vlITGas~G--IG-----~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~ 81 (311)
T 3o26_A 10 TKRRCAVVTGGNKG--IG-----FEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSL 81 (311)
T ss_dssp --CCEEEESSCSSH--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHH
T ss_pred CCCcEEEEecCCch--HH-----HHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHH
Confidence 45788999998776 21 122455666775 6888876 3688999999886 21
Q ss_pred -C------CceeEEEecc
Q psy9773 106 -P------EKVDIIVSEW 116 (252)
Q Consensus 106 -~------~~fDlIv~~~ 116 (252)
. +..|++|.+-
T Consensus 82 ~~~~~~~~g~iD~lv~nA 99 (311)
T 3o26_A 82 ADFIKTHFGKLDILVNNA 99 (311)
T ss_dssp HHHHHHHHSSCCEEEECC
T ss_pred HHHHHHhCCCCCEEEECC
Confidence 0 5799999844
No 400
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=57.25 E-value=22 Score=26.10 Aligned_cols=56 Identities=11% Similarity=0.004 Sum_probs=38.6
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccCC----C-CceeEEEe
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVEL----P-EKVDIIVS 114 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~----~-~~fDlIv~ 114 (252)
..+|+=+|||.=+..+ +..+...| .+|+++|. ..+.++.+|..+... . ..+|+|++
T Consensus 6 ~~~v~I~G~G~iG~~l--------a~~L~~~g-~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGL--------VRELTAAG-KKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCSHHHHHH--------HHHHHHTT-CCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCCHHHHHH--------HHHHHHCC-CeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 3579999997643344 55566666 46999998 457788888876421 1 46898877
No 401
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=57.12 E-value=21 Score=30.97 Aligned_cols=86 Identities=10% Similarity=-0.006 Sum_probs=49.9
Q ss_pred CCCCCC--CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC-----------ceEEEEccccccCC------
Q psy9773 45 PNIFAG--KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL-----------ILEVIQNKIENVEL------ 105 (252)
Q Consensus 45 ~~~~~~--~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~-----------~i~~~~~d~~~~~~------ 105 (252)
....++ .+||-.|++.|--.. ....+...|+.+|++++.. .... ..|..+...
T Consensus 154 ~~~~~g~~~~vlI~GasggiG~~-------~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~ 225 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAAGACGSV-------AGQIGHFLGCSRVVGICGTHEKCILLTSELGFDA-AINYKKDNVAEQLRE 225 (357)
T ss_dssp SCCCTTSCCEEEESSTTBHHHHH-------HHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSE-EEETTTSCHHHHHHH
T ss_pred cCCCCCCccEEEEECCCcHHHHH-------HHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCce-EEecCchHHHHHHHH
Confidence 567788 999999985441132 1233444675479888871 1111 123222110
Q ss_pred --CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 106 --PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 106 --~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.+.+|+++.... ...+..+.++|+++|+++...
T Consensus 226 ~~~~~~d~vi~~~G----------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 226 SCPAGVDVYFDNVG----------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HCTTCEEEEEESCC----------HHHHHHHHHTEEEEEEEEECC
T ss_pred hcCCCCCEEEECCC----------HHHHHHHHHHhccCcEEEEEC
Confidence 125899976331 134666778999999998754
No 402
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=57.10 E-value=18 Score=31.27 Aligned_cols=84 Identities=12% Similarity=0.038 Sum_probs=50.5
Q ss_pred CCCCCCEEEEEcCCc-CchhhhhccCccchHHHhh-cCCCcEEEeeC-----------CceEEEEcccccc-------CC
Q psy9773 46 NIFAGKTVLDVGTGT-GKSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------LILEVIQNKIENV-------EL 105 (252)
Q Consensus 46 ~~~~~~~VLDlGcGt-G~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------~~i~~~~~d~~~~-------~~ 105 (252)
...++.+||-+|+|. | .+ +..+++ .|..+|+++|. ..-.++..+- ++ ..
T Consensus 168 ~~~~g~~vlv~GaG~vG--~~--------a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~~t~ 236 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLG--HV--------GIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-GAADAIRELTG 236 (345)
T ss_dssp GCCTTCEEEEECCSHHH--HH--------HHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-THHHHHHHHHG
T ss_pred CCCCCCEEEEECCCHHH--HH--------HHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHHHhC
Confidence 578899999999864 4 33 444444 54568999987 1112222111 11 00
Q ss_pred CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 106 PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
...+|+|+-... . ...+..+.++|+++|+++....
T Consensus 237 g~g~d~v~d~~G-----~----~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 237 GQGATAVFDFVG-----A----QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GGCEEEEEESSC-----C----HHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCeEEEECCC-----C----HHHHHHHHHHHhcCCEEEEECC
Confidence 136999976221 1 1356666789999999987643
No 403
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=56.34 E-value=28 Score=30.35 Aligned_cols=34 Identities=26% Similarity=0.420 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY 90 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~ 90 (252)
.|++|+=||+|.|+... +..+++.+. .+|+-+|.
T Consensus 1 aGKkVvIIG~G~AG~~a--------A~~L~~~~~~~~Vtlie~ 35 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATA--------AKYIKLADPSIEVTLIEP 35 (401)
T ss_dssp -CCEEEEECCSHHHHHH--------HHHHHHHCTTSEEEEECS
T ss_pred CcCEEEEECCcHHHHHH--------HHHHHhcCcCCeEEEEeC
Confidence 37899999999997666 555655543 36888876
No 404
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=56.27 E-value=22 Score=30.02 Aligned_cols=81 Identities=12% Similarity=-0.015 Sum_probs=46.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHH-HhhcCCCcEEEeeC----------CceEEEEccccc-cCCC---CceeE
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSF-CTKVHPLDHYAPQY----------LILEVIQNKIEN-VELP---EKVDI 111 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~-~a~~g~~~v~gvD~----------~~i~~~~~d~~~-~~~~---~~fDl 111 (252)
..+|.+||-+|++.|--.. ... +...|+ +|++++. .....+ .|..+ .... +.+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~--------~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~~~~~~~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTA--------AVQVARAMGL-RVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHH--------HHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEE
T ss_pred CCCCCEEEEECCCcHHHHH--------HHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEE-EECCcchhHHHHhcCceE
Confidence 7789999999983331133 333 334665 7999887 111111 12211 1000 46999
Q ss_pred EEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 112 IVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 112 Iv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
|+. .. . ..+..+.+.|+++|+++...
T Consensus 193 vid-~g-~---------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 193 VLE-VR-G---------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEE-CS-C---------TTHHHHHTTEEEEEEEEEC-
T ss_pred EEE-CC-H---------HHHHHHHHhhccCCEEEEEe
Confidence 976 32 1 13456678999999998654
No 405
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=55.79 E-value=28 Score=30.19 Aligned_cols=88 Identities=14% Similarity=-0.075 Sum_probs=48.8
Q ss_pred hCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC----------ceEEEEccccccC--------
Q psy9773 43 DNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL----------ILEVIQNKIENVE-------- 104 (252)
Q Consensus 43 ~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~----------~i~~~~~d~~~~~-------- 104 (252)
......+|.+||-.|++.|--.. ....+...|+ +|++++.. ..... .|..+..
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~-------~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTA-------AIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAG-FNYKKEDFSEATLKF 226 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHH-------HHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEE-EETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCccHHHHH-------HHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEE-EecCChHHHHHHHHH
Confidence 34567889999999954331122 0233444665 69998861 11111 1222111
Q ss_pred C-CCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 L-PEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ~-~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
. ...+|+++.... . . .+..+.++|+++|+++....
T Consensus 227 ~~~~~~d~vi~~~G-~-----~----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 227 TKGAGVNLILDCIG-G-----S----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp TTTSCEEEEEESSC-G-----G----GHHHHHHHEEEEEEEEECCC
T ss_pred hcCCCceEEEECCC-c-----h----HHHHHHHhccCCCEEEEEec
Confidence 1 136999987332 1 1 24455688899999987643
No 406
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=55.64 E-value=25 Score=28.95 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=55.4
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEe-eC----------------CceEEEEccccccCCC----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAP-QY----------------LILEVIQNKIENVELP---- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gv-D~----------------~~i~~~~~d~~~~~~~---- 106 (252)
..++++|=.|++.| += --++..+++.|+ +|+.+ +. .++.++.+|+.+...-
T Consensus 6 l~~k~vlVTGas~G--IG-----~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 77 (259)
T 3edm_A 6 FTNRTIVVAGAGRD--IG-----RACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAI 77 (259)
T ss_dssp TTTCEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEECCCch--HH-----HHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 46789999998877 21 112455666775 57766 32 4578889999776310
Q ss_pred -------CceeEEEeccccc-c---cC--Chhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 107 -------EKVDIIVSEWMGF-Y---LL--HESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 -------~~fDlIv~~~~~~-~---l~--~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+..|++|.+-... . +. ...+ ...+++.+.+.|+++|.++....
T Consensus 78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 144 (259)
T 3edm_A 78 SAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS 144 (259)
T ss_dssp HHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 5799998743211 0 00 1111 23344555667777777776543
No 407
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=55.46 E-value=31 Score=28.50 Aligned_cols=94 Identities=15% Similarity=0.047 Sum_probs=55.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------------CceEEEEccccccCCC-
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------------LILEVIQNKIENVELP- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------------~~i~~~~~d~~~~~~~- 106 (252)
...++++|=.|++.| += --++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 8 ~l~~k~vlVTGas~G--IG-----~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 79 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKN--LG-----ALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVA 79 (262)
T ss_dssp CCTTCEEEEETCSSH--HH-----HHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHH
T ss_pred CCCCCEEEEECCCch--HH-----HHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 356789999998877 21 112445566664 5777643 3578889999776311
Q ss_pred ----------CceeEEEecccccccC-----Chhh-----------HHHHHHHHhccccCCeEEEeec
Q psy9773 107 ----------EKVDIIVSEWMGFYLL-----HESM-----------IDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 107 ----------~~fDlIv~~~~~~~l~-----~~~~-----------~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+..|++|.+-...... ...+ ...+++.+.+.|+++|.++...
T Consensus 80 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 80 KLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 5799998843211110 1112 2234445566677778877654
No 408
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=54.99 E-value=11 Score=38.66 Aligned_cols=89 Identities=12% Similarity=0.033 Sum_probs=57.5
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC-----------Cc-eEEEEccccccCCC--CceeEE
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY-----------LI-LEVIQNKIENVELP--EKVDII 112 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~-----------~~-i~~~~~d~~~~~~~--~~fDlI 112 (252)
..+..+||+|+|.= +..+...+. ..|+.+|. .. -.|++.|......- .++|++
T Consensus 826 ~~~~~~lDLGTGPE------------cRiLsliP~~~pvtmvD~RP~ae~~~~w~~~~T~yi~~DYl~~~~~~~~~~d~v 893 (1299)
T 3iyl_W 826 PNLAHLLDLGTGPE------------CRILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYSTAAFWNGIRCDSA 893 (1299)
T ss_dssp GGGCSEEEETCCSS------------CSGGGSSCTTSCEEEEESSCCSSCGGGBCTTTEEEEESCSSSGGGGSSCCCSEE
T ss_pred CCCCEEEEcCCCcc------------ceeeecCCCCCceEEEecCCccccccccccccceeEEeccccceeEecCCCCEE
Confidence 34588999999887 333333333 47999999 44 78999998776543 689999
Q ss_pred Eeccccccc--CChhhHHHHHHHHhccccCCe--EEEeec
Q psy9773 113 VSEWMGFYL--LHESMIDSVIFARDKFLKPEG--VMYPYK 148 (252)
Q Consensus 113 v~~~~~~~l--~~~~~~~~~l~~l~~~LkpgG--~lv~~~ 148 (252)
.|...+... ...-++...++.+.+.+++.| .+++.-
T Consensus 894 tailSLGAA~a~a~~tl~~~l~~~l~~~~~~~v~~l~lQL 933 (1299)
T 3iyl_W 894 TAIFTIGAAAAAAGTDLIAFVQQLIPRIVAAGGTRMWLQL 933 (1299)
T ss_dssp EETTTHHHHHHHTTCCHHHHHHHHHHHHHHTTCSEEEECC
T ss_pred EEeeechhhhhhCCCcHHHHHHHHHHHHHhcCceEEEEEe
Confidence 984433111 111257777777777777655 344443
No 409
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=54.78 E-value=63 Score=27.11 Aligned_cols=94 Identities=7% Similarity=0.016 Sum_probs=56.7
Q ss_pred CCCCEEEEEcCCc--CchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccccccCCC----
Q psy9773 48 FAGKTVLDVGTGT--GKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIENVELP---- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGt--G~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~~~~~---- 106 (252)
..++++|=.|+++ | += -.++..++..|+ +|+.++. ..+.++++|+.+...-
T Consensus 28 l~~k~vlVTGasg~~G--IG-----~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 99 (296)
T 3k31_A 28 MEGKKGVIIGVANDKS--LA-----WGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMF 99 (296)
T ss_dssp TTTCEEEEECCCSTTS--HH-----HHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCC--HH-----HHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHH
Confidence 4578999999864 4 21 111555666775 5888876 3467889999776310
Q ss_pred -------CceeEEEecccccc---------cCChhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 107 -------EKVDIIVSEWMGFY---------LLHESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 -------~~fDlIv~~~~~~~---------l~~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+..|++|.+-.... -....+ ...+++.+.+.|+.+|.++....
T Consensus 100 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 100 KVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 57899998442211 011112 23345556677777888876544
No 410
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=54.48 E-value=33 Score=29.56 Aligned_cols=89 Identities=19% Similarity=0.132 Sum_probs=49.9
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHh-hcCCCcEEEeeC---------CceEEEEccccccC------
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCT-KVHPLDHYAPQY---------LILEVIQNKIENVE------ 104 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a-~~g~~~v~gvD~---------~~i~~~~~d~~~~~------ 104 (252)
+.+.....+|.+||-+|++.|--.+ ...++ ..|+ +|+++.- .....+. +-.++.
T Consensus 142 l~~~~~~~~g~~VlV~Ga~g~iG~~--------~~q~a~~~Ga-~Vi~~~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~ 211 (343)
T 3gaz_A 142 LVDRAQVQDGQTVLIQGGGGGVGHV--------AIQIALARGA-RVFATARGSDLEYVRDLGATPID-ASREPEDYAAEH 211 (343)
T ss_dssp HTTTTCCCTTCEEEEETTTSHHHHH--------HHHHHHHTTC-EEEEEECHHHHHHHHHHTSEEEE-TTSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEecCCCHHHHH--------HHHHHHHCCC-EEEEEeCHHHHHHHHHcCCCEec-cCCCHHHHHHHH
Confidence 3344677899999999954331133 33333 4665 6888732 1122222 111111
Q ss_pred -CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 -LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 -~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
....+|+|+-... . ..+..+.+.|+++|+++....
T Consensus 212 ~~~~g~D~vid~~g-----~-----~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 212 TAGQGFDLVYDTLG-----G-----PVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp HTTSCEEEEEESSC-----T-----HHHHHHHHHEEEEEEEEESCC
T ss_pred hcCCCceEEEECCC-----c-----HHHHHHHHHHhcCCeEEEEcc
Confidence 1146999976221 1 245666688999999987543
No 411
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=54.47 E-value=59 Score=27.78 Aligned_cols=86 Identities=13% Similarity=0.109 Sum_probs=49.6
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEE------cccc---ccCCCCc
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQ------NKIE---NVELPEK 108 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~------~d~~---~~~~~~~ 108 (252)
+...+|.=+|+|.=+..+ +..+++.| ..|+.+ . ..+.+.. ..+. +...-..
T Consensus 17 ~~~~kI~IiGaGa~G~~~--------a~~L~~~G-~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYY--------GGMLARAG-HEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQG 86 (318)
T ss_dssp ---CEEEEESCSHHHHHH--------HHHHHHTT-CEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGGTT
T ss_pred ccCCcEEEECcCHHHHHH--------HHHHHHCC-CeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHcCC
Confidence 455789999999876666 66666665 356666 4 1111110 0000 0000156
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+|+|+... .......++..+...++|+..++....
T Consensus 87 ~D~vilav------k~~~~~~~l~~l~~~l~~~~~iv~~~n 121 (318)
T 3hwr_A 87 ADLVLFCV------KSTDTQSAALAMKPALAKSALVLSLQN 121 (318)
T ss_dssp CSEEEECC------CGGGHHHHHHHHTTTSCTTCEEEEECS
T ss_pred CCEEEEEc------ccccHHHHHHHHHHhcCCCCEEEEeCC
Confidence 89987722 112567888888889999887775443
No 412
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=53.51 E-value=25 Score=30.51 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=45.6
Q ss_pred CEEEEEcCCc-CchhhhhccCccch-HHHh-h-cCCCcEEEeeCC-----c--------eEEEEccccccCC------CC
Q psy9773 51 KTVLDVGTGT-GKSILLQGHGVDHH-SFCT-K-VHPLDHYAPQYL-----I--------LEVIQNKIENVEL------PE 107 (252)
Q Consensus 51 ~~VLDlGcGt-G~~~ll~~~~v~~s-~~~a-~-~g~~~v~gvD~~-----~--------i~~~~~d~~~~~~------~~ 107 (252)
.+||-+|+|. | .+ + ..++ + .|+++|++++.. + ...+ |..+... .+
T Consensus 174 ~~VlV~GaG~vG--~~--------a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~~g 241 (357)
T 2b5w_A 174 SSAFVLGNGSLG--LL--------TLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDVYE 241 (357)
T ss_dssp CEEEEECCSHHH--HH--------HHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHHSC
T ss_pred CEEEEECCCHHH--HH--------HHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHhCC
Confidence 9999999842 3 44 4 4444 4 566559999872 2 1222 2221110 13
Q ss_pred ceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 108 KVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+|+|+-... . ...+..+.++|+++|+++....
T Consensus 242 g~Dvvid~~g-----~----~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 242 QMDFIYEATG-----F----PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp CEEEEEECSC-----C----HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCEEEECCC-----C----hHHHHHHHHHHhcCCEEEEEeC
Confidence 6899875221 1 1245666788999999987654
No 413
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=53.49 E-value=43 Score=27.63 Aligned_cols=59 Identities=24% Similarity=0.115 Sum_probs=39.3
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCCCCceeEEEe
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVELPEKVDIIVS 114 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~~~~fDlIv~ 114 (252)
...+++||=+|+|.=+... ...+...|+ .|+.++. ..+.++......-.+ ..+|+||+
T Consensus 28 ~L~gk~VLVVGgG~va~~k--------a~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL-~~adLVIa 97 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRR--------IKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDL-LNVFFIVV 97 (223)
T ss_dssp CCTTCCEEEECCSHHHHHH--------HHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGS-SSCSEEEE
T ss_pred EcCCCEEEEECCCHHHHHH--------HHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHh-CCCCEEEE
Confidence 3578899999999765554 555666775 5877766 356666554433222 46899987
Q ss_pred c
Q psy9773 115 E 115 (252)
Q Consensus 115 ~ 115 (252)
.
T Consensus 98 A 98 (223)
T 3dfz_A 98 A 98 (223)
T ss_dssp C
T ss_pred C
Confidence 3
No 414
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=53.42 E-value=55 Score=27.80 Aligned_cols=84 Identities=11% Similarity=0.018 Sum_probs=49.9
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------CceEEEE--cccc--cc---CCC---CceeEE
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------LILEVIQ--NKIE--NV---ELP---EKVDII 112 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------~~i~~~~--~d~~--~~---~~~---~~fDlI 112 (252)
.+|+=+|+|.-+..+ +..+++.| ..|+.++. ..+.+.. ++.. .. ..+ ..+|+|
T Consensus 3 mkI~IiGaGaiG~~~--------a~~L~~~g-~~V~~~~r~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~v 73 (312)
T 3hn2_A 3 LRIAIVGAGALGLYY--------GALLQRSG-EDVHFLLRRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLV 73 (312)
T ss_dssp -CEEEECCSTTHHHH--------HHHHHHTS-CCEEEECSTTHHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEE
T ss_pred CEEEEECcCHHHHHH--------HHHHHHCC-CeEEEEEcCcHHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEE
Confidence 468889999887777 66677666 35777765 2222221 1110 00 001 568999
Q ss_pred EecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 113 VSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 113 v~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+...=. .....++..+...++|+..++...+
T Consensus 74 ilavk~------~~~~~~l~~l~~~l~~~~~iv~l~n 104 (312)
T 3hn2_A 74 LVGLKT------FANSRYEELIRPLVEEGTQILTLQN 104 (312)
T ss_dssp EECCCG------GGGGGHHHHHGGGCCTTCEEEECCS
T ss_pred EEecCC------CCcHHHHHHHHhhcCCCCEEEEecC
Confidence 873221 2344677888888888887776543
No 415
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=52.46 E-value=15 Score=31.40 Aligned_cols=47 Identities=17% Similarity=0.020 Sum_probs=31.0
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 36 AYRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 36 ~~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
-+.+.+.+......++++|=+|+|-.+-.. ...++..|+.+++-++.
T Consensus 111 Gf~~~L~~~g~~~~~~~~lilGaGGaarai--------~~aL~~~g~~~i~i~nR 157 (269)
T 3tum_A 111 GFLGAAHKHGFEPAGKRALVIGCGGVGSAI--------AYALAEAGIASITLCDP 157 (269)
T ss_dssp HHHHHHHHTTCCCTTCEEEEECCSHHHHHH--------HHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHhCCCcccCeEEEEecHHHHHHH--------HHHHHHhCCCeEEEeCC
Confidence 344555554455678999999998664333 45556677777777765
No 416
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=51.83 E-value=74 Score=27.43 Aligned_cols=19 Identities=16% Similarity=0.354 Sum_probs=14.3
Q ss_pred HHhCCCCCCCCEEEEEcCC
Q psy9773 41 ICDNPNIFAGKTVLDVGTG 59 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcG 59 (252)
+.......+|.+||=+|++
T Consensus 159 l~~~~~~~~g~~VlV~Ga~ 177 (357)
T 1zsy_A 159 LMDFEQLQPGDSVIQNASN 177 (357)
T ss_dssp HHHSSCCCTTCEEEESSTT
T ss_pred HHHHhccCCCCEEEEeCCc
Confidence 3344567899999999973
No 417
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=51.45 E-value=41 Score=28.97 Aligned_cols=85 Identities=11% Similarity=0.050 Sum_probs=52.3
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------CceEEEEc------cccccCCC---CceeEE
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------LILEVIQN------KIENVELP---EKVDII 112 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------~~i~~~~~------d~~~~~~~---~~fDlI 112 (252)
.+|+=+|+|.=+..+ +..+++.| ..|+.++. ..+.+... .+.....+ ..+|+|
T Consensus 4 mkI~IiGaG~~G~~~--------a~~L~~~g-~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~V 74 (335)
T 3ghy_A 4 TRICIVGAGAVGGYL--------GARLALAG-EAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAALGEQDVV 74 (335)
T ss_dssp CCEEEESCCHHHHHH--------HHHHHHTT-CCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHHHCCCSEE
T ss_pred CEEEEECcCHHHHHH--------HHHHHHCC-CEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHHcCCCCEE
Confidence 578999999765666 66666666 36888876 22222110 01000001 568999
Q ss_pred EecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 113 VSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 113 v~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+... .......++..+...|+|+..++...+.
T Consensus 75 ilav------k~~~~~~~~~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 75 IVAV------KAPALESVAAGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp EECC------CHHHHHHHHGGGSSSCCTTCEEEECCSS
T ss_pred EEeC------CchhHHHHHHHHHhhCCCCCEEEEECCC
Confidence 8722 2235778888898999999888765544
No 418
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=51.02 E-value=43 Score=28.16 Aligned_cols=94 Identities=9% Similarity=-0.004 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------------CceEEEEccccccCC----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------------LILEVIQNKIENVEL---- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------------~~i~~~~~d~~~~~~---- 105 (252)
..++++|=.|++.| += -.++..+++.|+ +|+.++. .++.++.+|+.+...
T Consensus 47 l~~k~vlVTGas~G--IG-----~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 118 (294)
T 3r3s_A 47 LKDRKALVTGGDSG--IG-----RAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSL 118 (294)
T ss_dssp TTTCEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHH
T ss_pred CCCCEEEEeCCCcH--HH-----HHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHH
Confidence 45789999998776 21 112455666674 5777654 357788888876531
Q ss_pred -C------CceeEEEecccccc-cC-----Chhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 106 -P------EKVDIIVSEWMGFY-LL-----HESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 -~------~~fDlIv~~~~~~~-l~-----~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
. +..|++|.+-.... .. ...+ ...+++.+.+.++.+|.++....
T Consensus 119 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 119 VHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 0 57899988433211 10 1111 23455566777888888876554
No 419
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=50.90 E-value=35 Score=29.44 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=47.8
Q ss_pred HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeCC--------ce-EEEEccccccC------
Q psy9773 41 ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQYL--------IL-EVIQNKIENVE------ 104 (252)
Q Consensus 41 l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~~--------~i-~~~~~d~~~~~------ 104 (252)
+.+.....+|.+||=.|++.|--.+ +..+++ .|..+|++++.. .. .++. .-.++.
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~--------a~qla~~~g~~~V~~~~~~~~~~~~~~ga~~~~~-~~~~~~~~~~~~ 204 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQA--------VAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFD-RNADYVQEVKRI 204 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHH--------HHHHHTTSTTCEEEEEECGGGHHHHGGGSSEEEE-TTSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHH--------HHHHHHHcCCcEEEEeCCHHHHHHHHcCCcEEEc-CCccHHHHHHHh
Confidence 4344678899999999984331144 444444 445678877640 01 1221 111110
Q ss_pred CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 105 LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 105 ~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.++.+|+|+-... . . .+..+.++|+++|+++....
T Consensus 205 ~~~g~Dvv~d~~g-----~-~----~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 205 SAEGVDIVLDCLC-----G-D----NTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp CTTCEEEEEEECC-----------------CTTEEEEEEEEEEC-
T ss_pred cCCCceEEEECCC-----c-h----hHHHHHHHhhcCCEEEEECC
Confidence 1246999976221 1 1 12456799999999987643
No 420
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=50.45 E-value=64 Score=27.13 Aligned_cols=62 Identities=13% Similarity=0.154 Sum_probs=42.6
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCC----
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELP---- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~---- 106 (252)
...+++||=.|++.| += -.++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 28 ~l~gk~vlVTGas~g--IG-----~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~ 99 (301)
T 3tjr_A 28 GFDGRAAVVTGGASG--IG-----LATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLA 99 (301)
T ss_dssp CSTTCEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCCH--HH-----HHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 357789999999877 21 112455666774 6888877 3678899999876321
Q ss_pred -------CceeEEEecc
Q psy9773 107 -------EKVDIIVSEW 116 (252)
Q Consensus 107 -------~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 100 ~~~~~~~g~id~lvnnA 116 (301)
T 3tjr_A 100 DEAFRLLGGVDVVFSNA 116 (301)
T ss_dssp HHHHHHHSSCSEEEECC
T ss_pred HHHHHhCCCCCEEEECC
Confidence 4789998843
No 421
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=50.32 E-value=65 Score=28.58 Aligned_cols=84 Identities=14% Similarity=0.070 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEcccccc-CCCCceeEEEeccc
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENV-ELPEKVDIIVSEWM 117 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~-~~~~~fDlIv~~~~ 117 (252)
.+.+||.++-+-| .+ ++.+.. ..+++.+.- ..+..... ..+ ..+..||+|+..+-
T Consensus 45 ~~~~~l~~n~~~g--~~--------~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~d~v~~~~P 110 (381)
T 3dmg_A 45 FGERALDLNPGVG--WG--------SLPLEG--RMAVERLETSRAAFRCLTASGLQARLA--LPWEAAAGAYDLVVLALP 110 (381)
T ss_dssp CSSEEEESSCTTS--TT--------TGGGBT--TBEEEEEECBHHHHHHHHHTTCCCEEC--CGGGSCTTCEEEEEEECC
T ss_pred hCCcEEEecCCCC--cc--------ccccCC--CCceEEEeCcHHHHHHHHHcCCCcccc--CCccCCcCCCCEEEEECC
Confidence 4479999999999 54 333331 134555533 22221111 112 23478999976331
Q ss_pred ccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 118 GFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 118 ~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
-. -........|..+.+.|+|||.+++..
T Consensus 111 k~--k~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 111 AG--RGTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp GG--GCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc--hhHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 00 011346788888899999999998765
No 422
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=50.09 E-value=31 Score=28.64 Aligned_cols=94 Identities=12% Similarity=-0.012 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP---- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~---- 106 (252)
..++++|=.|++.| += --++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 25 ~~~k~~lVTGas~G--IG-----~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~ 96 (267)
T 3u5t_A 25 ETNKVAIVTGASRG--IG-----AAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLF 96 (267)
T ss_dssp --CCEEEEESCSSH--HH-----HHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred cCCCEEEEeCCCCH--HH-----HHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence 45789999998877 21 112455666775 5666533 4677889999776310
Q ss_pred -------CceeEEEecccccccC-----Chhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 107 -------EKVDIIVSEWMGFYLL-----HESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 -------~~fDlIv~~~~~~~l~-----~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+..|++|.+-...... ...+ ...+++.+.+.|+++|.++....
T Consensus 97 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 97 ATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 5799998843221110 1111 22344455666777888876543
No 423
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=49.80 E-value=5.4 Score=35.36 Aligned_cols=88 Identities=9% Similarity=0.011 Sum_probs=45.6
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC-------------ceEEEEccccccCCC-CceeEEEe
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL-------------ILEVIQNKIENVELP-EKVDIIVS 114 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~-------------~i~~~~~d~~~~~~~-~~fDlIv~ 114 (252)
++.+||=+|+|.=+... ...+...|+ +|+++|.. .+..+..+..++... ..+|+||.
T Consensus 166 ~~~~VlViGaGgvG~~a--------a~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~ 236 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEA--------AKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIG 236 (361)
T ss_dssp CCCEEEEECCSHHHHHH--------HHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEECCCHHHHHH--------HHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEE
Confidence 45899999996432223 344555776 79999871 121221111111000 36899987
Q ss_pred cccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 115 EWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 115 ~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
....... ..+.-+.....+.|+|||+++-..
T Consensus 237 ~~~~~~~---~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 237 AVLVPGR---RAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp CCCCTTS---SCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCCcCCC---CCCeecCHHHHhhCCCCCEEEEEe
Confidence 3321110 000001233457789999888654
No 424
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=49.75 E-value=89 Score=25.88 Aligned_cols=83 Identities=16% Similarity=0.076 Sum_probs=49.9
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEc------ccc--cc-CCCC---c
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQN------KIE--NV-ELPE---K 108 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~------d~~--~~-~~~~---~ 108 (252)
.+|.=+|+|.=+..+ +..+++.| .+|+.+|. ..+.+... .+. .. .... .
T Consensus 4 m~i~iiG~G~~G~~~--------a~~l~~~g-~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRL--------GIMLHQGG-NDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECCSHHHHHH--------HHHHHHTT-CEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECcCHHHHHH--------HHHHHhCC-CcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCC
Confidence 478899998765555 56666666 46888877 12222210 111 11 1112 6
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+|+|+... .......++..+...|+|+..++...
T Consensus 75 ~d~vi~~v------~~~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 75 VDLIIALT------KAQQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp CSEEEECS------CHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred CCEEEEEe------ccccHHHHHHHHHHhcCCCCEEEEec
Confidence 89998732 12356778888888899888776543
No 425
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=49.13 E-value=71 Score=25.98 Aligned_cols=61 Identities=23% Similarity=0.276 Sum_probs=41.0
Q ss_pred CCCCEEEEEcC-CcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC---
Q psy9773 48 FAGKTVLDVGT-GTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP--- 106 (252)
Q Consensus 48 ~~~~~VLDlGc-GtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~--- 106 (252)
..+++||=.|+ |+| += -.++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 20 l~~k~vlITGasg~G--IG-----~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~ 91 (266)
T 3o38_A 20 LKGKVVLVTAAAGTG--IG-----STTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDAL 91 (266)
T ss_dssp TTTCEEEESSCSSSS--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEECCCCCc--hH-----HHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHH
Confidence 46789999998 666 21 111455666774 5888876 3688999999875310
Q ss_pred --------CceeEEEecc
Q psy9773 107 --------EKVDIIVSEW 116 (252)
Q Consensus 107 --------~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 92 ~~~~~~~~g~id~li~~A 109 (266)
T 3o38_A 92 ITQTVEKAGRLDVLVNNA 109 (266)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHhCCCcEEEECC
Confidence 4789998843
No 426
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=48.13 E-value=72 Score=26.26 Aligned_cols=77 Identities=13% Similarity=-0.013 Sum_probs=46.5
Q ss_pred EEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC----------ceE-EEEccccccCCCCceeEEEecccccc
Q psy9773 52 TVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL----------ILE-VIQNKIENVELPEKVDIIVSEWMGFY 120 (252)
Q Consensus 52 ~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~----------~i~-~~~~d~~~~~~~~~fDlIv~~~~~~~ 120 (252)
+|.=+|||.=+..+ +..+...|. +|+++|.. .+. ....+.... ...|+|+...
T Consensus 2 ~i~iiG~G~~G~~~--------a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~D~vi~av---- 65 (279)
T 2f1k_A 2 KIGVVGLGLIGASL--------AGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLSLL---QTAKIIFLCT---- 65 (279)
T ss_dssp EEEEECCSHHHHHH--------HHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGGGG---TTCSEEEECS----
T ss_pred EEEEEcCcHHHHHH--------HHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccCCHHHh---CCCCEEEEEC----
Confidence 57778988644444 555555663 68888871 111 112233332 4689998732
Q ss_pred cCChhhHHHHHHHHhccccCCeEEEe
Q psy9773 121 LLHESMIDSVIFARDKFLKPEGVMYP 146 (252)
Q Consensus 121 l~~~~~~~~~l~~l~~~LkpgG~lv~ 146 (252)
.......++..+...++|+.+++-
T Consensus 66 --~~~~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 66 --PIQLILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp --CHHHHHHHHHHHGGGSCTTCEEEE
T ss_pred --CHHHHHHHHHHHHhhCCCCCEEEE
Confidence 123566778888888888887654
No 427
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=47.45 E-value=64 Score=27.27 Aligned_cols=94 Identities=14% Similarity=0.074 Sum_probs=48.5
Q ss_pred HHHHHH-HHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------Cc--eEEEEcc
Q psy9773 35 EAYRAA-ICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LI--LEVIQNK 99 (252)
Q Consensus 35 ~~~~~~-l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~--i~~~~~d 99 (252)
.-+... +........++++|=+|+|--+-.. ...++..|+.+|+.++. .. +.. ..
T Consensus 104 ~G~~~~lL~~~~~~l~~k~~lvlGaGg~~~ai--------a~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~--~~ 173 (272)
T 3pwz_A 104 IGLLRDIEENLGEPLRNRRVLLLGAGGAVRGA--------LLPFLQAGPSELVIANRDMAKALALRNELDHSRLRI--SR 173 (272)
T ss_dssp HHHHHHHHTTSCCCCTTSEEEEECCSHHHHHH--------HHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEE--EC
T ss_pred HHHHHHHHHHcCCCccCCEEEEECccHHHHHH--------HHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeE--ee
Confidence 334454 4332334578999999987221122 34455677667877766 11 222 23
Q ss_pred ccccCCCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEE
Q psy9773 100 IENVELPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMY 145 (252)
Q Consensus 100 ~~~~~~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv 145 (252)
+.++.. ..+|+||+.....+....+. + -...|+++..++
T Consensus 174 ~~~l~~-~~~DivInaTp~gm~~~~~~----i--~~~~l~~~~~V~ 212 (272)
T 3pwz_A 174 YEALEG-QSFDIVVNATSASLTADLPP----L--PADVLGEAALAY 212 (272)
T ss_dssp SGGGTT-CCCSEEEECSSGGGGTCCCC----C--CGGGGTTCSEEE
T ss_pred HHHhcc-cCCCEEEECCCCCCCCCCCC----C--CHHHhCcCCEEE
Confidence 333322 57999998543332211110 1 124577777664
No 428
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=46.78 E-value=18 Score=34.55 Aligned_cols=79 Identities=15% Similarity=0.149 Sum_probs=45.8
Q ss_pred CccchHHHhhcCCCcEEEeeC-------CceEEEEccc--------ccc--CCC--CceeEEEecccccccCCh-h----
Q psy9773 70 GVDHHSFCTKVHPLDHYAPQY-------LILEVIQNKI--------ENV--ELP--EKVDIIVSEWMGFYLLHE-S---- 125 (252)
Q Consensus 70 ~v~~s~~~a~~g~~~v~gvD~-------~~i~~~~~d~--------~~~--~~~--~~fDlIv~~~~~~~l~~~-~---- 125 (252)
+-+...++.+....+|.-+-. .+++++. ++ .++ -+| +.||+|+++.-..+-.|+ +
T Consensus 165 ~~~~~~~~~k~~g~~vl~v~~~~~~~p~krv~wi~-p~~~~ga~~~~~l~lG~p~~~ryDlvfvn~~t~yr~HHyqQCeD 243 (670)
T 4gua_A 165 PGPVKKFLNQFKHHSVLVVSEEKIEAPRKRIEWIA-PIGIAGADKNYNLAFGFPPQARYDLVFINIGTKYRNHHFQQCED 243 (670)
T ss_dssp CCCTHHHHTTSCCSEEEEECSSCCCCTTSEEEEEE-CTTCTTCSEECCGGGCCCCCCCEEEEEECCCCCCCSCHHHHHHH
T ss_pred CccHHHHHHhccCceEEEEecccccCCCceEEEec-CCCCCCCceeeeccCCCCCCCcccEEEEecCCCcccchHHHHHH
Confidence 556666666654455555542 5666653 21 111 122 789999995443222221 1
Q ss_pred ---hHHHHHHHHhccccCCeEEEeecc
Q psy9773 126 ---MIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 126 ---~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+..+-....+.|+|||.+++...
T Consensus 244 Ha~~l~ml~~~al~~l~pGGt~v~~~Y 270 (670)
T 4gua_A 244 HAATLKTLSRSALNCLNPGGTLVVKSY 270 (670)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred HHHHHHHHhHHHHhhcCCCceEEEEEe
Confidence 344555667899999999988654
No 429
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=46.77 E-value=18 Score=33.58 Aligned_cols=86 Identities=15% Similarity=0.090 Sum_probs=55.0
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccccccCCCCcee
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIENVELPEKVD 110 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~~~~~~~fD 110 (252)
....+++|.=||||+=+... ++=+...|..-++|+-. ... ...++.+.. ...|
T Consensus 33 ~~lkgK~IaVIGyGsQG~Aq--------AlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf--~v~~~~eA~--~~AD 100 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQ--------GLNMRDSGLDISYALRKEAIAEKRASWRKATENGF--KVGTYEELI--PQAD 100 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHH--------HHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTC--EEEEHHHHG--GGCS
T ss_pred HHHcCCEEEEeCCChHhHHH--------HhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCC--EecCHHHHH--HhCC
Confidence 45678999999999976555 55566677544445431 111 122222211 4679
Q ss_pred EEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 111 IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 111 lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+|+. +..+.....+...+...|+||..|++++.
T Consensus 101 vV~~------L~PD~~q~~vy~~I~p~lk~G~~L~faHG 133 (491)
T 3ulk_A 101 LVIN------LTPDKQHSDVVRTVQPLMKDGAALGYSHG 133 (491)
T ss_dssp EEEE------CSCGGGHHHHHHHHGGGSCTTCEEEESSC
T ss_pred EEEE------eCChhhHHHHHHHHHhhCCCCCEEEecCc
Confidence 9865 22233455667889999999999999885
No 430
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=46.11 E-value=1.1e+02 Score=25.45 Aligned_cols=62 Identities=16% Similarity=0.111 Sum_probs=42.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCCC-------
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVELP------- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~~------- 106 (252)
...++++|=.|++.| += --++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 26 ~l~gk~vlVTGas~g--IG-----~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 97 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAG--IG-----LAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDAC 97 (277)
T ss_dssp -CTTCEEEETTTTST--HH-----HHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcH--HH-----HHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHH
Confidence 356789999998877 21 112455666775 6888887 3678889999876310
Q ss_pred ----CceeEEEecc
Q psy9773 107 ----EKVDIIVSEW 116 (252)
Q Consensus 107 ----~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 98 ~~~~g~iD~lvnnA 111 (277)
T 3gvc_A 98 VAAFGGVDKLVANA 111 (277)
T ss_dssp HHHHSSCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 5789998843
No 431
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=45.58 E-value=66 Score=30.97 Aligned_cols=33 Identities=21% Similarity=-0.014 Sum_probs=25.1
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
+.+||=+|||.=+..+ +..++..|..+++.+|.
T Consensus 17 ~s~VlVVGaGGLGsev--------ak~La~aGVG~ItlvD~ 49 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCEL--------LKNLVLTGFSHIDLIDL 49 (640)
T ss_dssp HCEEEEECCSHHHHHH--------HHHHHHHTCCEEEEEEC
T ss_pred cCeEEEECcCHHHHHH--------HHHHHHcCCCeEEEecC
Confidence 3789999997544444 56677788888999987
No 432
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=45.29 E-value=47 Score=27.66 Aligned_cols=62 Identities=11% Similarity=0.055 Sum_probs=42.2
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC---
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP--- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~--- 106 (252)
...++++|=.|++.| += --++..++..|+ +|+.++. .++.++.+|+.+...-
T Consensus 26 ~~~~k~~lVTGas~G--IG-----~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 97 (280)
T 4da9_A 26 QKARPVAIVTGGRRG--IG-----LGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQAT 97 (280)
T ss_dssp CCCCCEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHH
T ss_pred ccCCCEEEEecCCCH--HH-----HHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 456789999998877 21 111455666775 5887774 3678899999876421
Q ss_pred --------CceeEEEecc
Q psy9773 107 --------EKVDIIVSEW 116 (252)
Q Consensus 107 --------~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 98 ~~~~~~~~g~iD~lvnnA 115 (280)
T 4da9_A 98 VDAVVAEFGRIDCLVNNA 115 (280)
T ss_dssp HHHHHHHHSCCCEEEEEC
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 4789998844
No 433
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=44.66 E-value=24 Score=28.70 Aligned_cols=93 Identities=15% Similarity=0.084 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC----------------CceEEEEccccccCCC-----
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------------LILEVIQNKIENVELP----- 106 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~----- 106 (252)
.+++||=.|++.| += -.++..++. .|+ +|+.++. .++.++.+|+.+...-
T Consensus 3 ~~k~vlITGasgg--IG-----~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~ 74 (276)
T 1wma_A 3 GIHVALVTGGNKG--IG-----LAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRD 74 (276)
T ss_dssp CCCEEEESSCSSH--HH-----HHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcH--HH-----HHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHH
Confidence 4678888886554 11 112444555 664 6887766 2578889998765210
Q ss_pred ------CceeEEEecccccccC----C-hhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 107 ------EKVDIIVSEWMGFYLL----H-ESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 107 ------~~fDlIv~~~~~~~l~----~-~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+.+|+||.+-...... . ..+ ...++..+.+.++++|++++...
T Consensus 75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 75 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 3799998743211100 0 111 22345556667777788776543
No 434
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=44.63 E-value=64 Score=28.04 Aligned_cols=85 Identities=16% Similarity=0.001 Sum_probs=45.4
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHh-hcCCCcEEEeeC---------Cce-EEEEcccccc----CCCCceeE
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCT-KVHPLDHYAPQY---------LIL-EVIQNKIENV----ELPEKVDI 111 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a-~~g~~~v~gvD~---------~~i-~~~~~d~~~~----~~~~~fDl 111 (252)
..+|.+||=.|++.|--.+ ...++ ..|+ +|++++. ... .++..+-.++ .....+|+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~--------~~qla~~~Ga-~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTF--------AIQVMKAWDA-HVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp TCTTCEEEEETTTSHHHHH--------HHHHHHHTTC-EEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSE
T ss_pred cCCCCEEEEECCCCHHHHH--------HHHHHHhCCC-EEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCE
Confidence 6789999999943221133 33333 3565 6877765 111 1121111111 00146899
Q ss_pred EEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 112 IVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 112 Iv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
|+-... .....+....++|+++|+++...
T Consensus 252 vid~~g--------~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 252 ILDNVG--------GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEESSC--------TTHHHHGGGGBCSSSCCEEEESC
T ss_pred EEECCC--------ChhhhhHHHHHhhcCCcEEEEeC
Confidence 876221 11123566678999999998754
No 435
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=44.58 E-value=37 Score=30.63 Aligned_cols=32 Identities=16% Similarity=0.086 Sum_probs=22.2
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
..+|+|+-... . ..+..+.++|+++|+++...
T Consensus 313 ~g~Dvvid~~G--------~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 313 EDIDIVFEHPG--------R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp CCEEEEEECSC--------H--HHHHHHHHHEEEEEEEEESC
T ss_pred CCCcEEEEcCC--------c--hhHHHHHHHhhCCcEEEEEe
Confidence 47999976221 1 34566678999999998754
No 436
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=43.94 E-value=39 Score=26.94 Aligned_cols=82 Identities=13% Similarity=-0.026 Sum_probs=48.8
Q ss_pred EEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEccccccCC----C-CceeEEEec
Q psy9773 52 TVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNKIENVEL----P-EKVDIIVSE 115 (252)
Q Consensus 52 ~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d~~~~~~----~-~~fDlIv~~ 115 (252)
+|+=+|+|.=+..+ +..+...| ..|+.+|. ..+.++.+|..+... . ..+|+|++.
T Consensus 2 ~iiIiG~G~~G~~l--------a~~L~~~g-~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGGETTAYYL--------ARSMLSRK-YGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECCHHHHHHH--------HHHHHHTT-CCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECCCHHHHHH--------HHHHHhCC-CeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 46777876543344 45555565 46999987 356788898876421 1 568998873
Q ss_pred ccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 116 WMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 116 ~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
. .. .....++..+.+.+.|...++...
T Consensus 73 ~-----~~-d~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 73 T-----PR-DEVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp C-----SC-HHHHHHHHHHHHHTSCCCEEEECC
T ss_pred c-----CC-cHHHHHHHHHHHHHcCCCeEEEEE
Confidence 2 11 223334444455566766666543
No 437
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=43.91 E-value=8 Score=33.21 Aligned_cols=46 Identities=9% Similarity=0.004 Sum_probs=27.6
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 37 YRAAICDNPNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 37 ~~~~l~~~~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
+...+........++++|=+|+|--+-.. ...++..|+.+|+.++.
T Consensus 114 ~~~~l~~~~~~l~~k~vlVlGaGG~g~ai--------a~~L~~~G~~~v~i~~R 159 (283)
T 3jyo_A 114 FGRGMEEGLPNAKLDSVVQVGAGGVGNAV--------AYALVTHGVQKLQVADL 159 (283)
T ss_dssp HHHHHHHHCTTCCCSEEEEECCSHHHHHH--------HHHHHHTTCSEEEEECS
T ss_pred HHHHHHHhCcCcCCCEEEEECCcHHHHHH--------HHHHHHCCCCEEEEEEC
Confidence 44444433345678999999997221222 34455677767877766
No 438
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=43.77 E-value=20 Score=24.99 Aligned_cols=59 Identities=10% Similarity=0.055 Sum_probs=36.7
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccCC----CCceeEEEe
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVEL----PEKVDIIVS 114 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~----~~~fDlIv~ 114 (252)
.+.+|+=+|+|.=+..+ ...+...|..+|+++|. ..+.++..|+.+... -..+|+|+.
T Consensus 4 ~~~~v~I~G~G~iG~~~--------~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMI--------AALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp TCEEEEEECCSHHHHHH--------HHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CcCeEEEECCCHHHHHH--------HHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 34689999995433333 44555566456888887 356677777765321 146888877
Q ss_pred c
Q psy9773 115 E 115 (252)
Q Consensus 115 ~ 115 (252)
.
T Consensus 76 ~ 76 (118)
T 3ic5_A 76 A 76 (118)
T ss_dssp C
T ss_pred C
Confidence 3
No 439
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=43.69 E-value=52 Score=26.53 Aligned_cols=94 Identities=13% Similarity=-0.053 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------CceEEEEccccccCC---------CCceeEEE
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------LILEVIQNKIENVEL---------PEKVDIIV 113 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------~~i~~~~~d~~~~~~---------~~~fDlIv 113 (252)
.++++|=.|++.| += --++..+++.+...|+.++. ..+.++.+|+.+... .+..|++|
T Consensus 3 ~~k~vlITGas~g--IG-----~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv 75 (244)
T 4e4y_A 3 AMANYLVTGGSKG--IG-----KAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFDGIF 75 (244)
T ss_dssp CCEEEEEETTTSH--HH-----HHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEE
T ss_pred CCCeEEEeCCCCh--HH-----HHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCCEEE
Confidence 4578999998877 32 01133344422346777776 457788999876521 14789998
Q ss_pred ecccccc---cC--Chhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 114 SEWMGFY---LL--HESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 114 ~~~~~~~---l~--~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+-.... +. ...+ ...+++.+.+.|+++|.++....
T Consensus 76 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS 127 (244)
T 4e4y_A 76 LNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGS 127 (244)
T ss_dssp ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECC
T ss_pred ECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECC
Confidence 8432211 00 1111 22344555667777777776543
No 440
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=43.51 E-value=36 Score=29.08 Aligned_cols=84 Identities=12% Similarity=-0.032 Sum_probs=48.5
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC--------ceEEEE---ccc-------cccC--CCCcee
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL--------ILEVIQ---NKI-------ENVE--LPEKVD 110 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~--------~i~~~~---~d~-------~~~~--~~~~fD 110 (252)
.+|+=+|+|.-+..+ +..+++.| ..|+.++.. .+.+.. ++. .... ....+|
T Consensus 3 mkI~IiGaGaiG~~~--------a~~L~~~g-~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFY--------GALLAKTG-HCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHH--------HHHHHHTT-CEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCS
T ss_pred CEEEEECcCHHHHHH--------HHHHHhCC-CeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCC
Confidence 478889999776666 66666666 467777662 112211 110 0000 013789
Q ss_pred EEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 111 IIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 111 lIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+|+...=.+ ....++..+...++|+..++....
T Consensus 74 lVilavK~~------~~~~~l~~l~~~l~~~t~Iv~~~n 106 (320)
T 3i83_A 74 CTLLCIKVV------EGADRVGLLRDAVAPDTGIVLISN 106 (320)
T ss_dssp EEEECCCCC------TTCCHHHHHTTSCCTTCEEEEECS
T ss_pred EEEEecCCC------ChHHHHHHHHhhcCCCCEEEEeCC
Confidence 998733212 233567778888888887765443
No 441
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=42.94 E-value=51 Score=31.61 Aligned_cols=54 Identities=20% Similarity=0.181 Sum_probs=37.6
Q ss_pred ceEEEEccccccC------------CCCceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 92 ILEVIQNKIENVE------------LPEKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 92 ~i~~~~~d~~~~~------------~~~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+..++.+|+.+.. .+...-++++..++.++... ....+|..+.++ |+|.+++..
T Consensus 189 ~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~-~~~~ll~~~~~~--~~~~~~~~e 254 (695)
T 2zwa_A 189 KYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPE-RSDSIIEATSKM--ENSHFIILE 254 (695)
T ss_dssp SEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHH-HHHHHHHHHHTS--SSEEEEEEE
T ss_pred CeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHH-HHHHHHHHHhhC--CCceEEEEE
Confidence 6778899998741 12456788888888877444 688888888754 677666543
No 442
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=42.63 E-value=33 Score=28.13 Aligned_cols=62 Identities=11% Similarity=0.077 Sum_probs=41.4
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCC----
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELP---- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~---- 106 (252)
...+++||=.|++.| +- -.++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 26 ~l~~k~vlITGas~g--IG-----~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 97 (262)
T 3rkr_A 26 SLSGQVAVVTGASRG--IG-----AAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFA 97 (262)
T ss_dssp TTTTCEEEESSTTSH--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEECCCCh--HH-----HHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHH
Confidence 356789999998776 21 112445566675 5888876 3678889998766310
Q ss_pred -------CceeEEEecc
Q psy9773 107 -------EKVDIIVSEW 116 (252)
Q Consensus 107 -------~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 98 ~~~~~~~g~id~lv~~A 114 (262)
T 3rkr_A 98 TGVLAAHGRCDVLVNNA 114 (262)
T ss_dssp HHHHHHHSCCSEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 4689998843
No 443
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=42.54 E-value=23 Score=31.17 Aligned_cols=33 Identities=12% Similarity=-0.150 Sum_probs=24.4
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
+.+||=+|||.=+..+ +..++..|..+++-+|.
T Consensus 36 ~~~VlivG~GGlG~~i--------a~~La~~Gvg~itlvD~ 68 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEI--------AKNLILAGVKGLTMLDH 68 (346)
T ss_dssp TCEEEEECCSHHHHHH--------HHHHHHHTCSEEEEECC
T ss_pred CCeEEEECCCHHHHHH--------HHHHHHcCCCEEEEEEC
Confidence 4789999997433333 56677788888999987
No 444
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=42.05 E-value=57 Score=26.87 Aligned_cols=60 Identities=10% Similarity=0.069 Sum_probs=41.3
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCC--------C
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVEL--------P 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~--------~ 106 (252)
..++++|=.|++.| += -.++..+++.|+ +|+.++. .++.++.+|+.+... .
T Consensus 28 l~~k~vlVTGas~G--IG-----~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 99 (281)
T 3ppi_A 28 FEGASAIVSGGAGG--LG-----EATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAAN 99 (281)
T ss_dssp GTTEEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCh--HH-----HHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 46788999998877 21 112455666775 6888887 468899999976531 1
Q ss_pred --CceeEEEec
Q psy9773 107 --EKVDIIVSE 115 (252)
Q Consensus 107 --~~fDlIv~~ 115 (252)
+..|++|.+
T Consensus 100 ~~~~id~lv~~ 110 (281)
T 3ppi_A 100 QLGRLRYAVVA 110 (281)
T ss_dssp TSSEEEEEEEC
T ss_pred HhCCCCeEEEc
Confidence 478998875
No 445
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=41.76 E-value=55 Score=27.23 Aligned_cols=62 Identities=13% Similarity=0.115 Sum_probs=42.3
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCC-----C--
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVEL-----P-- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~-----~-- 106 (252)
...++++|=.|++.| += --++..+++.|+ +|+.++. .++.++.+|+.+... .
T Consensus 24 ~l~~k~vlVTGas~G--IG-----~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSG--IG-----RATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKT 95 (277)
T ss_dssp TTTTCEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcH--HH-----HHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Confidence 456789999998877 21 112455666775 6888887 467888999977531 0
Q ss_pred ----CceeEEEecc
Q psy9773 107 ----EKVDIIVSEW 116 (252)
Q Consensus 107 ----~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 96 ~~~~g~iD~lv~nA 109 (277)
T 4dqx_A 96 TAKWGRVDVLVNNA 109 (277)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 4789998843
No 446
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=41.38 E-value=31 Score=31.52 Aligned_cols=33 Identities=15% Similarity=-0.090 Sum_probs=25.1
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
+.+||=+|||.=+..+ +..++..|..+++.+|.
T Consensus 40 ~~~VlvvG~GGlGs~v--------a~~La~aGvg~i~ivD~ 72 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCEL--------LKNLALSGFRQIHVIDM 72 (434)
T ss_dssp TCCEEEECSSTHHHHH--------HHHHHHTTCCCEEEEEC
T ss_pred CCEEEEECcCHHHHHH--------HHHHHHcCCCEEEEEcC
Confidence 4689999997544444 56777788888999987
No 447
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=41.27 E-value=8.7 Score=34.27 Aligned_cols=89 Identities=12% Similarity=0.114 Sum_probs=46.3
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCCc-------------eEEEEccccccCCC-CceeEEE
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYLI-------------LEVIQNKIENVELP-EKVDIIV 113 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~~-------------i~~~~~d~~~~~~~-~~fDlIv 113 (252)
.++++|+=+|+|.=+... +..+...|+ +|+++|... +.....+..++..- ..+|+|+
T Consensus 166 l~g~~V~ViG~G~iG~~~--------a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi 236 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNA--------ARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVI 236 (377)
T ss_dssp BCCCEEEEECCSHHHHHH--------HHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEECCCHHHHHH--------HHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEE
Confidence 467899999996533333 444555776 799999711 11110011111000 4589998
Q ss_pred ecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 114 SEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 114 ~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.... .+......-+.....+.|+|||+++-..
T Consensus 237 ~~~~---~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 237 GAVL---VPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp ECCC---CTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred ECCC---cCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 7321 1110001111334457789999988654
No 448
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=41.15 E-value=7.8 Score=35.01 Aligned_cols=33 Identities=9% Similarity=0.063 Sum_probs=24.0
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
++.+|+=+|+|.=+... ...+...|+ +|+++|.
T Consensus 183 ~~~kV~ViG~G~iG~~a--------a~~a~~lGa-~V~v~D~ 215 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQA--------LATAKRLGA-KTTGYDV 215 (381)
T ss_dssp CCCEEEEESCSHHHHHH--------HHHHHHHTC-EEEEECS
T ss_pred CCCEEEEECchHHHHHH--------HHHHHHCCC-EEEEEeC
Confidence 67899999998643333 445555776 6999998
No 449
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=41.09 E-value=64 Score=27.96 Aligned_cols=78 Identities=18% Similarity=0.129 Sum_probs=45.5
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCCc-------------eEEEEccccccCCC-------Cce
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYLI-------------LEVIQNKIENVELP-------EKV 109 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~~-------------i~~~~~d~~~~~~~-------~~f 109 (252)
|.+||-+|+| |--.+ ...++...|+ +|++++... ...+ | .+ ... +.+
T Consensus 181 g~~VlV~GaG-~vG~~-------~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~-~~~~~~~~~~~~~ 247 (366)
T 2cdc_A 181 CRKVLVVGTG-PIGVL-------FTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY--N-SS-NGYDKLKDSVGKF 247 (366)
T ss_dssp TCEEEEESCH-HHHHH-------HHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE--E-CT-TCSHHHHHHHCCE
T ss_pred CCEEEEECCC-HHHHH-------HHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee--c-hH-HHHHHHHHhCCCC
Confidence 8999999983 21122 0233444676 788887632 2222 3 22 211 359
Q ss_pred eEEEecccccccCChhhHHHHH-HHHhccccCCeEEEeecc
Q psy9773 110 DIIVSEWMGFYLLHESMIDSVI-FARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 110 DlIv~~~~~~~l~~~~~~~~~l-~~l~~~LkpgG~lv~~~~ 149 (252)
|+|+.... .. ..+ ..+.+.|+++|+++....
T Consensus 248 d~vid~~g-----~~----~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 248 DVIIDATG-----AD----VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEEEECCC-----CC----THHHHHHGGGEEEEEEEEECSC
T ss_pred CEEEECCC-----Ch----HHHHHHHHHHHhcCCEEEEEec
Confidence 99986331 11 134 666789999999987643
No 450
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=40.07 E-value=92 Score=26.64 Aligned_cols=80 Identities=11% Similarity=0.017 Sum_probs=49.0
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCC-cEEEeeCCc-----------eEEEEccccc-cCCCCceeEEEeccc
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPL-DHYAPQYLI-----------LEVIQNKIEN-VELPEKVDIIVSEWM 117 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~-~v~gvD~~~-----------i~~~~~d~~~-~~~~~~fDlIv~~~~ 117 (252)
.+|.=||+|.=+..+ +..+...|.. .|+++|... +.....+... . -...|+||...
T Consensus 34 ~kI~IIG~G~mG~sl--------A~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~--~~~aDvVilav- 102 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSF--------AKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVE--DFSPDFVMLSS- 102 (314)
T ss_dssp SEEEEESCSHHHHHH--------HHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGG--GGCCSEEEECS-
T ss_pred CEEEEEeeCHHHHHH--------HHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHh--hccCCEEEEeC-
Confidence 689999988643344 5566666642 799999821 1112223332 1 13579998732
Q ss_pred ccccCChhhHHHHHHHHhccccCCeEEEe
Q psy9773 118 GFYLLHESMIDSVIFARDKFLKPEGVMYP 146 (252)
Q Consensus 118 ~~~l~~~~~~~~~l~~l~~~LkpgG~lv~ 146 (252)
.......++..+...|+||.+++-
T Consensus 103 -----p~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 103 -----PVRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp -----CGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred -----CHHHHHHHHHHHhhccCCCcEEEE
Confidence 123466788888888999887653
No 451
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=39.73 E-value=1.4e+02 Score=24.31 Aligned_cols=56 Identities=14% Similarity=0.126 Sum_probs=35.7
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC------CceEEEEccccccCC-C----CceeEEEe
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------LILEVIQNKIENVEL-P----EKVDIIVS 114 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------~~i~~~~~d~~~~~~-~----~~fDlIv~ 114 (252)
+++||=.|| | .+ |-.+...+...| .+|++++. .++.++.+|+.+... . +.+|+||.
T Consensus 3 ~~~ilVtGa--G--~i----G~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih 69 (286)
T 3gpi_A 3 LSKILIAGC--G--DL----GLELARRLTAQG-HEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVY 69 (286)
T ss_dssp CCCEEEECC--S--HH----HHHHHHHHHHTT-CCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEE
T ss_pred CCcEEEECC--C--HH----HHHHHHHHHHCC-CEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEE
Confidence 357898895 4 22 111134445556 46988877 478899999976532 1 34999987
No 452
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=39.53 E-value=9.1 Score=34.84 Aligned_cols=33 Identities=9% Similarity=0.085 Sum_probs=24.2
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
++.+|+=+|+|.=+... +..+...|+ +|+++|.
T Consensus 189 ~~~kV~ViG~G~iG~~a--------a~~a~~lGa-~V~v~D~ 221 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQA--------IATARRLGA-VVSATDV 221 (405)
T ss_dssp CCCEEEEECCSHHHHHH--------HHHHHHTTC-EEEEECS
T ss_pred CCCEEEEECCcHHHHHH--------HHHHHHCCC-EEEEEcC
Confidence 56899999998654444 445555776 6999998
No 453
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=39.50 E-value=1.3e+02 Score=23.25 Aligned_cols=41 Identities=10% Similarity=0.037 Sum_probs=29.1
Q ss_pred HHHhhcCCCcEEEeeC----------CceEEEEccccccCCC--CceeEEEecc
Q psy9773 75 SFCTKVHPLDHYAPQY----------LILEVIQNKIENVELP--EKVDIIVSEW 116 (252)
Q Consensus 75 ~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~~--~~fDlIv~~~ 116 (252)
..++..| .+|++++. .++.++.+|+.+.... ..+|+||...
T Consensus 18 ~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~a 70 (224)
T 3h2s_A 18 AEARRRG-HEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDAL 70 (224)
T ss_dssp HHHHHTT-CEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECC
T ss_pred HHHHHCC-CEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECC
Confidence 4445556 46888876 4788999999876433 5689998843
No 454
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=38.87 E-value=11 Score=33.50 Aligned_cols=34 Identities=15% Similarity=0.082 Sum_probs=23.5
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
.++.+|+=+|+|.=+... ...+...|+ +|+++|.
T Consensus 170 l~g~~V~ViGaG~iG~~a--------a~~a~~~Ga-~V~~~d~ 203 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQA--------IATAKRLGA-VVMATDV 203 (384)
T ss_dssp ECCCEEEEECCSHHHHHH--------HHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEECCCHHHHHH--------HHHHHHCCC-EEEEEeC
Confidence 368899999998543333 344455776 5999998
No 455
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=38.83 E-value=63 Score=27.13 Aligned_cols=83 Identities=12% Similarity=0.062 Sum_probs=48.0
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC--ceEEEEcc------c--cccCC-CCceeEEEeccccc
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL--ILEVIQNK------I--ENVEL-PEKVDIIVSEWMGF 119 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~--~i~~~~~d------~--~~~~~-~~~fDlIv~~~~~~ 119 (252)
.+|+=+|+|.=+..+ +..+++.| ..|+.++.. .+.....+ + ..... ...+|+|+...
T Consensus 3 mkI~iiGaGa~G~~~--------a~~L~~~g-~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilav--- 70 (294)
T 3g17_A 3 LSVAIIGPGAVGTTI--------AYELQQSL-PHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAV--- 70 (294)
T ss_dssp CCEEEECCSHHHHHH--------HHHHHHHC-TTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECS---
T ss_pred cEEEEECCCHHHHHH--------HHHHHHCC-CeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeC---
Confidence 468889999766666 66666666 357777662 12211100 0 00011 14689987722
Q ss_pred ccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 120 YLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 120 ~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
...+...++..+...++|+..++...
T Consensus 71 ---k~~~~~~~l~~l~~~l~~~~~iv~~~ 96 (294)
T 3g17_A 71 ---KTHQLDAVIPHLTYLAHEDTLIILAQ 96 (294)
T ss_dssp ---CGGGHHHHGGGHHHHEEEEEEEEECC
T ss_pred ---CccCHHHHHHHHHHhhCCCCEEEEec
Confidence 22356678888888888877766544
No 456
>3g2e_A OORC subunit of 2-oxoglutarate:acceptor oxidoredu; structural genomics, PSI-2, protein structure initiative; 2.00A {Campylobacter jejuni}
Probab=38.80 E-value=1e+02 Score=24.55 Aligned_cols=33 Identities=15% Similarity=0.067 Sum_probs=22.6
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+.+|++++.. ...+ .+....|+|||++++.+..
T Consensus 69 g~~D~lv~~d----------~~~~-~~~~~~l~~gg~vi~ns~~ 101 (194)
T 3g2e_A 69 GEVDFMLSTA----------DKGY-KGFRGGVKEGGIIVVEPNL 101 (194)
T ss_dssp TCEEEEEECC----------HHHH-HHHGGGEEEEEEEEECTTT
T ss_pred CCCCEEEEcC----------HHHH-HHHHhccCCCeEEEEeCCC
Confidence 4899998822 1222 3345789999999988654
No 457
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=38.52 E-value=79 Score=25.69 Aligned_cols=61 Identities=16% Similarity=0.153 Sum_probs=41.3
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCCC--------
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVELP-------- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~~-------- 106 (252)
..++++|=.|++.| += -.++..+++.|+ +|+.++. .++.++++|+.+...-
T Consensus 6 l~~k~vlVTGas~g--IG-----~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 6 LEGKSALITGSARG--IG-----RAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTTCEEEEETCSSH--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH--HH-----HHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHH
Confidence 45789999998776 21 112455666774 6888886 4678889999765310
Q ss_pred ---CceeEEEecc
Q psy9773 107 ---EKVDIIVSEW 116 (252)
Q Consensus 107 ---~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 78 ~~~g~id~lv~~A 90 (259)
T 4e6p_A 78 EHAGGLDILVNNA 90 (259)
T ss_dssp HHSSSCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 4799998843
No 458
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=38.52 E-value=48 Score=30.76 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=37.5
Q ss_pred CCCCEEEEEc-CCcCchhhhhccCccchHHHhhcCCCcEEEeeC------------CceEEEEccccccCCCCceeEEEe
Q psy9773 48 FAGKTVLDVG-TGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY------------LILEVIQNKIENVELPEKVDIIVS 114 (252)
Q Consensus 48 ~~~~~VLDlG-cGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~------------~~i~~~~~d~~~~~~~~~fDlIv~ 114 (252)
+.+++|.=+| ||+|...+ +.++...|. +|++.|. ..+.+..+.-.. .....+|+||.
T Consensus 17 ~~~~~i~~iGiGg~Gms~l--------A~~l~~~G~-~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~-~~~~~~d~vV~ 86 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSL--------ALLARALGH-TVTGSDANIYPPMSTQLEQAGVTIEEGYLIA-HLQPAPDLVVV 86 (524)
T ss_dssp --CCEEEEETTTSHHHHHH--------HHHHHHTTC-EEEEEESCCCTTHHHHHHHTTCEEEESCCGG-GGCSCCSEEEE
T ss_pred ecCCEEEEEEecHhhHHHH--------HHHHHhCCC-EEEEECCCCCcHHHHHHHHCCCEEECCCCHH-HcCCCCCEEEE
Confidence 5668899999 57775556 677777884 6999998 245555442111 11235898887
Q ss_pred ccc
Q psy9773 115 EWM 117 (252)
Q Consensus 115 ~~~ 117 (252)
++.
T Consensus 87 Spg 89 (524)
T 3hn7_A 87 GNA 89 (524)
T ss_dssp CTT
T ss_pred CCC
Confidence 554
No 459
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=38.17 E-value=14 Score=32.75 Aligned_cols=88 Identities=10% Similarity=0.016 Sum_probs=45.0
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCCc-----------eEEEEcccccc-CCC---CceeEE
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYLI-----------LEVIQNKIENV-ELP---EKVDII 112 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~~-----------i~~~~~d~~~~-~~~---~~fDlI 112 (252)
..+++|+=+|+|.=+... +..+...|+ +|+++|... .. +..+.... ... ..+|+|
T Consensus 164 l~~~~V~ViGaG~iG~~~--------a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNA--------AKIALGMGA-QVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp BCCCEEEEECCSHHHHHH--------HHHHHHTTC-EEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCEEEEECCCHHHHHH--------HHHHHhCCC-EEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEE
Confidence 356899999986322222 444555776 799998711 11 11111111 011 468999
Q ss_pred EecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 113 VSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 113 v~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+...... .......+...+.+.|+|||+++...
T Consensus 234 i~~~g~~---~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVP---GAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC----------CCSCHHHHTTSCTTCEEEECC
T ss_pred EECCCCC---ccccchhHHHHHHHhhcCCCEEEEEe
Confidence 8733211 00011112344567789999887554
No 460
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=38.17 E-value=84 Score=26.43 Aligned_cols=81 Identities=15% Similarity=0.094 Sum_probs=48.3
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC----------ceEEEEccccccCCCCceeEEEecccccc
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL----------ILEVIQNKIENVELPEKVDIIVSEWMGFY 120 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~----------~i~~~~~d~~~~~~~~~fDlIv~~~~~~~ 120 (252)
.+|.=||+|.=+..+ +..+++.| ..|+++|.. .+.....+..+.- ...|+|+...
T Consensus 8 ~~I~iIG~G~mG~~~--------a~~l~~~G-~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~--~~aDvvi~~v---- 72 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGA--------ARSCLRAG-LSTWGADLNPQACANLLAEGACGAAASAREFA--GVVDALVILV---- 72 (303)
T ss_dssp CEEEEECCSHHHHHH--------HHHHHHTT-CEEEEECSCHHHHHHHHHTTCSEEESSSTTTT--TTCSEEEECC----
T ss_pred CeEEEECCCHHHHHH--------HHHHHHCC-CeEEEEECCHHHHHHHHHcCCccccCCHHHHH--hcCCEEEEEC----
Confidence 578889998654455 56666666 469999881 1211122222221 4579997722
Q ss_pred cCChhhHHHHH---HHHhccccCCeEEEee
Q psy9773 121 LLHESMIDSVI---FARDKFLKPEGVMYPY 147 (252)
Q Consensus 121 l~~~~~~~~~l---~~l~~~LkpgG~lv~~ 147 (252)
+.......++ ..+...|+||.+++-.
T Consensus 73 -p~~~~~~~v~~~~~~l~~~l~~g~ivv~~ 101 (303)
T 3g0o_A 73 -VNAAQVRQVLFGEDGVAHLMKPGSAVMVS 101 (303)
T ss_dssp -SSHHHHHHHHC--CCCGGGSCTTCEEEEC
T ss_pred -CCHHHHHHHHhChhhHHhhCCCCCEEEec
Confidence 3333455665 5667788888877644
No 461
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=37.86 E-value=79 Score=27.79 Aligned_cols=85 Identities=15% Similarity=0.162 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC-----------CceEEEEccccccCCCCceeEEEec
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY-----------LILEVIQNKIENVELPEKVDIIVSE 115 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~-----------~~i~~~~~d~~~~~~~~~fDlIv~~ 115 (252)
..|++|+=.|+|+.+.++ ...+ ..+. .-...+|. .++.++.-+.... ...|.|+..
T Consensus 317 ~~gk~v~~yGa~~~g~~l--------~~~~-~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~p~~~~~---~~~d~vl~~ 384 (416)
T 4e2x_A 317 AEGRSVVGYGATAKSATV--------TNFC-GIGPDLVHSVYDTTPDKQNRLTPGAHIPVRPASAFSD---PYPDYALLF 384 (416)
T ss_dssp HTTCCEEEECCCSHHHHH--------HHHH-TCCTTTSCCEEESCGGGTTEECTTTCCEEEEGGGCCS---SCCSEEEES
T ss_pred HcCCeEEEEccccHHHHH--------HHhc-CCCcceeeEEEeCCccccCccCCCCCCcCCCHHHHhh---cCCCEEEEe
Confidence 457899999999875555 2222 1221 12234555 2355544332111 356876552
Q ss_pred ccccccCChhhHHHHHHHHhccccCCeEEEeecccc
Q psy9773 116 WMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCIL 151 (252)
Q Consensus 116 ~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~~ 151 (252)
. .+ -...++..+..++.-||.|++..+..
T Consensus 385 ~-~~------~~~ei~~~~~~~~~~g~~~~~~~p~~ 413 (416)
T 4e2x_A 385 A-WN------HAEEIMAKEQEFHQAGGRWILYVPEV 413 (416)
T ss_dssp C-GG------GHHHHHHHCHHHHHTTCEEEECSSSC
T ss_pred c-ch------hHHHHHHHHHHHHhcCCEEEEECCce
Confidence 1 11 25678888888889999999987754
No 462
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=37.34 E-value=1.2e+02 Score=25.64 Aligned_cols=61 Identities=16% Similarity=0.093 Sum_probs=42.1
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------C--ceEEEEccccccCC----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------L--ILEVIQNKIENVEL---- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~--~i~~~~~d~~~~~~---- 105 (252)
..+++||=.|++.| += -.++..++..|+ +|++++. . ++.++.+|+.+...
T Consensus 6 l~~k~vlVTGas~g--IG-----~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~ 77 (319)
T 3ioy_A 6 FAGRTAFVTGGANG--VG-----IGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMA 77 (319)
T ss_dssp CTTCEEEEETTTST--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEcCCchH--HH-----HHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHH
Confidence 46789999999877 31 122455666775 5888877 1 78889999987531
Q ss_pred -------CCceeEEEecc
Q psy9773 106 -------PEKVDIIVSEW 116 (252)
Q Consensus 106 -------~~~fDlIv~~~ 116 (252)
-+..|++|.+-
T Consensus 78 ~~~~~~~~g~id~lv~nA 95 (319)
T 3ioy_A 78 ADEVEARFGPVSILCNNA 95 (319)
T ss_dssp HHHHHHHTCCEEEEEECC
T ss_pred HHHHHHhCCCCCEEEECC
Confidence 05789998844
No 463
>3on3_A Keto/oxoacid ferredoxin oxidoreductase, gamma SUB; structural genomics, PSI-2, protein structure initiative; 2.19A {Geobacter sulfurreducens}
Probab=37.14 E-value=75 Score=25.01 Aligned_cols=33 Identities=15% Similarity=0.085 Sum_probs=22.0
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
..+|++++.. ... +.+....|+|||++++.+..
T Consensus 69 ~~~D~lv~~~----------~~~-~~~~~~~l~~gg~vi~ns~~ 101 (183)
T 3on3_A 69 TQCDALLALT----------QEA-CDKYSADLKEGGVLLVDSDL 101 (183)
T ss_dssp -CCSEEEESS----------HHH-HHHSTTTSCTTCEEEEETTT
T ss_pred CCCCEEEEcC----------HHH-HHHHHhccCCCeEEEEeCCC
Confidence 5689998822 112 23345789999999998754
No 464
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=37.05 E-value=28 Score=29.15 Aligned_cols=62 Identities=19% Similarity=0.270 Sum_probs=44.2
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccCC-----C--Cc
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVEL-----P--EK 108 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~~-----~--~~ 108 (252)
..+.|+++|=-|+++| += --++..+++.|+ +|+.+|. .++..+++|+.+... . ++
T Consensus 7 dlf~GK~alVTGas~G--IG-----~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~ 78 (242)
T 4b79_A 7 DIYAGQQVLVTGGSSG--IG-----AAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPR 78 (242)
T ss_dssp TTTTTCEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSC
T ss_pred CCCCCCEEEEeCCCCH--HH-----HHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCC
Confidence 3468999999999888 31 122455667775 5888887 567888899876521 1 68
Q ss_pred eeEEEec
Q psy9773 109 VDIIVSE 115 (252)
Q Consensus 109 fDlIv~~ 115 (252)
.|++|.+
T Consensus 79 iDiLVNN 85 (242)
T 4b79_A 79 LDVLVNN 85 (242)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9999884
No 465
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=36.32 E-value=1.1e+02 Score=25.60 Aligned_cols=79 Identities=8% Similarity=-0.060 Sum_probs=43.9
Q ss_pred EEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC-----------CceEEEE-cccccc-C-CCCceeEEEecc
Q psy9773 52 TVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY-----------LILEVIQ-NKIENV-E-LPEKVDIIVSEW 116 (252)
Q Consensus 52 ~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~-----------~~i~~~~-~d~~~~-~-~~~~fDlIv~~~ 116 (252)
+||=.|++.|--.+ +..+++ .|+ +|++++. ..-.++. .+.... . ..+.+|+|+-..
T Consensus 149 ~VlV~Ga~G~vG~~--------aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~ 219 (324)
T 3nx4_A 149 EVVVTGASGGVGST--------AVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTV 219 (324)
T ss_dssp CEEESSTTSHHHHH--------HHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESS
T ss_pred eEEEECCCcHHHHH--------HHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECC
Confidence 49999973331144 444444 676 7999886 1111221 111111 0 115799986522
Q ss_pred cccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 117 MGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 117 ~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.. ..+..+.+.|+|+|+++....
T Consensus 220 ------g~----~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 220 ------GD----KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp ------CH----HHHHHHHHTEEEEEEEEECCC
T ss_pred ------Cc----HHHHHHHHHHhcCCEEEEEec
Confidence 11 156777789999999987643
No 466
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=36.32 E-value=87 Score=26.64 Aligned_cols=82 Identities=11% Similarity=0.020 Sum_probs=47.6
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------CceEEEEcc------c-ccc-CC-C--Cc
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------LILEVIQNK------I-ENV-EL-P--EK 108 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------~~i~~~~~d------~-~~~-~~-~--~~ 108 (252)
.+|.=+|+|.=+..+ +..++..| ..|+.+|. ..+.+...+ + ... .. . ..
T Consensus 5 mki~iiG~G~~G~~~--------a~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAF--------AAYLALKG-QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD 75 (359)
T ss_dssp CEEEEECCSHHHHHH--------HHHHHHTT-CEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTT
T ss_pred CeEEEECCCHHHHHH--------HHHHHhCC-CEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhc
Confidence 579999998754455 55566666 46888877 122221100 0 000 00 0 46
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEee
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPY 147 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~ 147 (252)
+|+|+...- . .....++..+...|++|..++..
T Consensus 76 ~D~vi~~v~-----~-~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 76 ADVILIVVP-----A-IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp CSEEEECSC-----G-GGHHHHHHHHGGGCCTTCEEEES
T ss_pred CCEEEEeCC-----c-hHHHHHHHHHHHhCCCCCEEEEc
Confidence 899887331 1 23467778888889998876655
No 467
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=36.04 E-value=45 Score=27.75 Aligned_cols=61 Identities=10% Similarity=0.037 Sum_probs=40.2
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCCC--------
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVELP-------- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~~-------- 106 (252)
..++++|=.|++.| += -.++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 26 ~~~k~~lVTGas~G--IG-----~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 97 (272)
T 4dyv_A 26 TGKKIAIVTGAGSG--VG-----RAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATV 97 (272)
T ss_dssp --CCEEEETTTTSH--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH--HH-----HHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHH
Confidence 45688998898776 21 112455666775 5888877 4678899999775310
Q ss_pred ---CceeEEEecc
Q psy9773 107 ---EKVDIIVSEW 116 (252)
Q Consensus 107 ---~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 98 ~~~g~iD~lVnnA 110 (272)
T 4dyv_A 98 EKFGRVDVLFNNA 110 (272)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 5799999843
No 468
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=35.88 E-value=54 Score=27.16 Aligned_cols=94 Identities=18% Similarity=0.050 Sum_probs=52.9
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCC-----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVEL----- 105 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~----- 105 (252)
..++++|=.|++.| += -.++..+++.|+ +|+.++. .++.++.+|+.+...
T Consensus 27 ~~~k~vlVTGas~g--IG-----~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 98 (283)
T 1g0o_A 27 LEGKVALVTGAGRG--IG-----REMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMF 98 (283)
T ss_dssp CTTCEEEETTTTSH--HH-----HHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEeCCCcH--HH-----HHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHH
Confidence 35688999898776 21 112444556664 5777654 246778888876521
Q ss_pred C------CceeEEEecccccccC-----ChhhH-----------HHHHHHHhccccCCeEEEeecc
Q psy9773 106 P------EKVDIIVSEWMGFYLL-----HESMI-----------DSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 106 ~------~~fDlIv~~~~~~~l~-----~~~~~-----------~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
. +..|++|.+-...... ...++ ..+++.+.+.|+.+|+++....
T Consensus 99 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 99 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 0 4689998843221110 11122 2234555566667777776543
No 469
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=35.81 E-value=92 Score=25.46 Aligned_cols=82 Identities=7% Similarity=-0.030 Sum_probs=47.8
Q ss_pred EEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--CceEEEEccc---c------ccCCC---CceeEEEeccc
Q psy9773 52 TVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--LILEVIQNKI---E------NVELP---EKVDIIVSEWM 117 (252)
Q Consensus 52 ~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--~~i~~~~~d~---~------~~~~~---~~fDlIv~~~~ 117 (252)
+|.=+|+|.=+..+ +..+++.| ..|+.+|. ..+.-+...- . ....+ ..+|+|+...-
T Consensus 2 ~i~iiG~G~~G~~~--------a~~l~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 72 (291)
T 1ks9_A 2 KITVLGCGALGQLW--------LTALCKQG-HEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLK 72 (291)
T ss_dssp EEEEECCSHHHHHH--------HHHHHHTT-CEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSC
T ss_pred eEEEECcCHHHHHH--------HHHHHhCC-CCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEec
Confidence 57788998654455 55666666 46888877 2222111100 0 00111 45899887332
Q ss_pred ccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 118 GFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 118 ~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
......++..+...++|+..++...
T Consensus 73 ------~~~~~~v~~~l~~~l~~~~~vv~~~ 97 (291)
T 1ks9_A 73 ------AWQVSDAVKSLASTLPVTTPILLIH 97 (291)
T ss_dssp ------GGGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred ------HHhHHHHHHHHHhhCCCCCEEEEec
Confidence 1246778888888898888776543
No 470
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=35.54 E-value=39 Score=29.31 Aligned_cols=86 Identities=10% Similarity=0.022 Sum_probs=45.4
Q ss_pred CCCC-CCCEEEEEcCCcCchhhhhccCccchHHH-hhcCCCcEEEeeC--Cce----------EEEEc-ccccc-CCCCc
Q psy9773 45 PNIF-AGKTVLDVGTGTGKSILLQGHGVDHHSFC-TKVHPLDHYAPQY--LIL----------EVIQN-KIENV-ELPEK 108 (252)
Q Consensus 45 ~~~~-~~~~VLDlGcGtG~~~ll~~~~v~~s~~~-a~~g~~~v~gvD~--~~i----------~~~~~-d~~~~-~~~~~ 108 (252)
.... +|.+||-+|+|.=+ .+ +..+ ...|+ +|++++. .+. .++.. +...+ ...+.
T Consensus 175 ~~~~~~g~~VlV~GaG~vG-~~--------a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g 244 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVG-HM--------GVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244 (357)
T ss_dssp TSTTSTTCEEEEECCSHHH-HH--------HHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTT
T ss_pred cCCCCCCCEEEEECCCHHH-HH--------HHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCC
Confidence 3456 89999999975311 22 2333 33675 6888887 111 11111 00000 01146
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeecc
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
+|+|+-... . .. .+....++|+|+|+++....
T Consensus 245 ~D~vid~~g-~----~~----~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 245 LDYVIDTVP-V----HH----ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp EEEEEECCC-S----CC----CSHHHHTTEEEEEEEEECSC
T ss_pred CCEEEECCC-C----hH----HHHHHHHHhccCCEEEEeCC
Confidence 999976221 1 11 13344588999999987543
No 471
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=35.17 E-value=55 Score=26.29 Aligned_cols=84 Identities=4% Similarity=-0.095 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC---------CceEEEEccccccC----CC-CceeEEEe
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------LILEVIQNKIENVE----LP-EKVDIIVS 114 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------~~i~~~~~d~~~~~----~~-~~fDlIv~ 114 (252)
...+|+=+|||.=+..+ +..+...| . |+++|. ..+.++.+|..+.. .. ..+|+|++
T Consensus 8 ~~~~viI~G~G~~G~~l--------a~~L~~~g-~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 8 KSRHVVICGWSESTLEC--------LRELRGSE-V-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIV 77 (234)
T ss_dssp --CEEEEESCCHHHHHH--------HHHSTTSE-E-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred CCCEEEEECCChHHHHH--------HHHHHhCC-e-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence 44689999987532333 33344444 3 888887 25778899987542 11 56898887
Q ss_pred cccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 115 EWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 115 ~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.. ... .....+....+.+.|+..++...
T Consensus 78 ~~-----~~d-~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 78 DL-----ESD-SETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp CC-----SCH-HHHHHHHHHHHHHCSSSEEEEEC
T ss_pred cC-----CCc-HHHHHHHHHHHHHCCCCeEEEEE
Confidence 32 121 22333344456678876666544
No 472
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=35.08 E-value=14 Score=32.01 Aligned_cols=25 Identities=12% Similarity=0.173 Sum_probs=22.0
Q ss_pred hHHHHHHHHhccccCCeEEEeeccc
Q psy9773 126 MIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 126 ~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+..+|..+..+|+|||+|++.+.+
T Consensus 211 ~L~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 211 ALKEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecC
Confidence 6888999999999999999887765
No 473
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=34.99 E-value=1.5e+02 Score=24.59 Aligned_cols=63 Identities=16% Similarity=0.159 Sum_probs=41.8
Q ss_pred CCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------------------CceEEEE
Q psy9773 46 NIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------------------LILEVIQ 97 (252)
Q Consensus 46 ~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------------------~~i~~~~ 97 (252)
....++++|=.|++.| += --++..+++.|+ +|+.+|. .++.++.
T Consensus 24 ~~l~gk~~lVTGas~G--IG-----~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (299)
T 3t7c_A 24 GKVEGKVAFITGAARG--QG-----RSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQ 95 (299)
T ss_dssp CTTTTCEEEEESTTSH--HH-----HHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccCCCEEEEECCCCH--HH-----HHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEE
Confidence 3456789999999887 21 112455666775 5777653 3677889
Q ss_pred ccccccCCC-----------CceeEEEecc
Q psy9773 98 NKIENVELP-----------EKVDIIVSEW 116 (252)
Q Consensus 98 ~d~~~~~~~-----------~~fDlIv~~~ 116 (252)
+|+.+...- +..|++|.+-
T Consensus 96 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA 125 (299)
T 3t7c_A 96 VDVRDFDAMQAAVDDGVTQLGRLDIVLANA 125 (299)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 999775310 5789998743
No 474
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=34.97 E-value=56 Score=28.69 Aligned_cols=33 Identities=9% Similarity=-0.049 Sum_probs=25.4
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
+.+||=+|||.=+... +..++..|..+++.+|.
T Consensus 118 ~~~VlvvG~GglGs~v--------a~~La~aGvg~i~lvD~ 150 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHV--------SVILATSGIGEIILIDN 150 (353)
T ss_dssp TCEEEEECCSHHHHHH--------HHHHHHHTCSEEEEEEC
T ss_pred CCeEEEECCCHHHHHH--------HHHHHhCCCCeEEEECC
Confidence 5789999997544444 66777888888988886
No 475
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=34.93 E-value=61 Score=26.67 Aligned_cols=61 Identities=13% Similarity=0.125 Sum_probs=39.5
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCC-----C---
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVEL-----P--- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~-----~--- 106 (252)
..++++|=.|++.| += -.++..+++.|+ +|+.++. .++.++.+|+.+... .
T Consensus 4 l~~k~vlITGas~g--IG-----~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (263)
T 2a4k_A 4 LSGKTILVTGAASG--IG-----RAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEAL 75 (263)
T ss_dssp TTTCEEEEESTTSH--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH--HH-----HHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHH
Confidence 35678999998766 21 112444556664 6888876 257788899876531 0
Q ss_pred ---CceeEEEecc
Q psy9773 107 ---EKVDIIVSEW 116 (252)
Q Consensus 107 ---~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 76 ~~~g~iD~lvnnA 88 (263)
T 2a4k_A 76 EEFGRLHGVAHFA 88 (263)
T ss_dssp HHHSCCCEEEEGG
T ss_pred HHcCCCcEEEECC
Confidence 4689998843
No 476
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=34.89 E-value=73 Score=26.21 Aligned_cols=62 Identities=11% Similarity=0.035 Sum_probs=41.7
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-------------CceEEEEccccccCCC-------
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-------------LILEVIQNKIENVELP------- 106 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-------------~~i~~~~~d~~~~~~~------- 106 (252)
...++++|=.|++.| += --++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 8 ~l~~k~vlVTGas~g--IG-----~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (271)
T 3tzq_B 8 ELENKVAIITGACGG--IG-----LETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFT 79 (271)
T ss_dssp TTTTCEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcH--HH-----HHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHH
Confidence 356789999998776 21 112455666775 6888876 3577888998765210
Q ss_pred ----CceeEEEecc
Q psy9773 107 ----EKVDIIVSEW 116 (252)
Q Consensus 107 ----~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 80 ~~~~g~id~lv~nA 93 (271)
T 3tzq_B 80 IDTFGRLDIVDNNA 93 (271)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 4789998843
No 477
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=34.69 E-value=78 Score=25.65 Aligned_cols=93 Identities=15% Similarity=0.063 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----CceEEEEccccccCC-----------CCceeEEE
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----LILEVIQNKIENVEL-----------PEKVDIIV 113 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----~~i~~~~~d~~~~~~-----------~~~fDlIv 113 (252)
-+++||=.|++.| += -.++..+++.|+ +|++++. ..-..+..|+.+... -+.+|++|
T Consensus 21 m~k~vlITGas~g--IG-----~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li 92 (251)
T 3orf_A 21 MSKNILVLGGSGA--LG-----AEVVKFFKSKSW-NTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV 92 (251)
T ss_dssp -CCEEEEETTTSH--HH-----HHHHHHHHHTTC-EEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred cCCEEEEECCCCH--HH-----HHHHHHHHHCCC-EEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3678999998876 21 112445666674 5888887 222344555544311 15789998
Q ss_pred ecccccc----cCC--hhh-----------HHHHHHHHhccccCCeEEEeecc
Q psy9773 114 SEWMGFY----LLH--ESM-----------IDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 114 ~~~~~~~----l~~--~~~-----------~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
.+-.... +.. ..+ ...+++.+.+.++++|.+++...
T Consensus 93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (251)
T 3orf_A 93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGA 145 (251)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEec
Confidence 8443211 111 111 22344555666777788876554
No 478
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=34.58 E-value=1e+02 Score=25.27 Aligned_cols=62 Identities=19% Similarity=0.162 Sum_probs=41.4
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------------------CceEEEEc
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------------------LILEVIQN 98 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------------------~~i~~~~~ 98 (252)
...++++|=.|++.| += -.++..+++.|+ +|+.++. .++.++.+
T Consensus 10 ~l~gk~vlVTGas~g--IG-----~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (278)
T 3sx2_A 10 PLTGKVAFITGAARG--QG-----RAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQA 81 (278)
T ss_dssp TTTTCEEEEESTTSH--HH-----HHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCCEEEEECCCCh--HH-----HHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeC
Confidence 356789999998776 21 112455666774 5887763 36788899
Q ss_pred cccccCCC-----------CceeEEEecc
Q psy9773 99 KIENVELP-----------EKVDIIVSEW 116 (252)
Q Consensus 99 d~~~~~~~-----------~~fDlIv~~~ 116 (252)
|+.+...- +..|++|.+-
T Consensus 82 D~~~~~~v~~~~~~~~~~~g~id~lv~nA 110 (278)
T 3sx2_A 82 DVRDRESLSAALQAGLDELGRLDIVVANA 110 (278)
T ss_dssp CTTCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 99765310 4789999844
No 479
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=34.50 E-value=1.5e+02 Score=24.76 Aligned_cols=84 Identities=10% Similarity=0.016 Sum_probs=47.7
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC----------ceEEEE-ccccccCCCCceeEEE
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL----------ILEVIQ-NKIENVELPEKVDIIV 113 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~----------~i~~~~-~d~~~~~~~~~fDlIv 113 (252)
.....+++|+=+|+|.=+..+ +..+...|+ +|+++|.. .+.+.. .++..+ -...|+|+
T Consensus 150 ~~~l~g~~v~IiG~G~iG~~~--------a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~--l~~aDvVi 218 (293)
T 3d4o_A 150 DFTIHGANVAVLGLGRVGMSV--------ARKFAALGA-KVKVGARESDLLARIAEMGMEPFHISKAAQE--LRDVDVCI 218 (293)
T ss_dssp SSCSTTCEEEEECCSHHHHHH--------HHHHHHTTC-EEEEEESSHHHHHHHHHTTSEEEEGGGHHHH--TTTCSEEE
T ss_pred CCCCCCCEEEEEeeCHHHHHH--------HHHHHhCCC-EEEEEECCHHHHHHHHHCCCeecChhhHHHH--hcCCCEEE
Confidence 345678999999988643333 445555675 79999872 122221 111111 15689998
Q ss_pred ecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 114 SEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 114 ~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
...-.+.+ +. . ..+.++||++++-..
T Consensus 219 ~~~p~~~i-~~----~----~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 219 NTIPALVV-TA----N----VLAEMPSHTFVIDLA 244 (293)
T ss_dssp ECCSSCCB-CH----H----HHHHSCTTCEEEECS
T ss_pred ECCChHHh-CH----H----HHHhcCCCCEEEEec
Confidence 85432222 11 1 234678998887544
No 480
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=34.21 E-value=2.2e+02 Score=24.26 Aligned_cols=89 Identities=13% Similarity=0.049 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCC-CcEEEeeC--------------------CceEEEEccccccCCCC
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHP-LDHYAPQY--------------------LILEVIQNKIENVELPE 107 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~-~~v~gvD~--------------------~~i~~~~~d~~~~~~~~ 107 (252)
...+|.=+|+|.-+..+ +..++..+. ..+..+|+ .++.+...+...+ .
T Consensus 5 ~~~KI~IIGaG~vG~~l--------a~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~---~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSY--------AFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDC---H 73 (317)
T ss_dssp CCCEEEEECCSHHHHHH--------HHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGG---T
T ss_pred CCCEEEEECCCHHHHHH--------HHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHh---C
Confidence 34689999998766555 555555543 46888887 1122222221111 4
Q ss_pred ceeEEEecccccccCCh----------hhHHHHHHHHhccccCCeEEEeecc
Q psy9773 108 KVDIIVSEWMGFYLLHE----------SMIDSVIFARDKFLKPEGVMYPYKC 149 (252)
Q Consensus 108 ~fDlIv~~~~~~~l~~~----------~~~~~~l~~l~~~LkpgG~lv~~~~ 149 (252)
..|+|+...-....+.. +-+..+...+.+. .|+|++++.++
T Consensus 74 ~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN 124 (317)
T 3d0o_A 74 DADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATN 124 (317)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSS
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence 68998873321111111 2244455555454 89999988654
No 481
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=33.88 E-value=40 Score=30.20 Aligned_cols=32 Identities=9% Similarity=-0.023 Sum_probs=21.8
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
..+|+|+-... . ..+....++|+++|+++...
T Consensus 305 ~g~Dvvid~~G--------~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 305 REPDIVFEHTG--------R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp SCCSEEEECSC--------H--HHHHHHHHHSCTTCEEEESC
T ss_pred CCceEEEECCC--------c--hHHHHHHHHHhcCCEEEEEe
Confidence 46899976221 1 24556668899999998764
No 482
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=33.54 E-value=35 Score=33.43 Aligned_cols=34 Identities=15% Similarity=-0.090 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY 90 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~ 90 (252)
...+||=+|||.=+..+ +..+++.|..+++.+|.
T Consensus 410 ~~~~vlvvG~GglG~~~--------~~~L~~~Gvg~i~l~D~ 443 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCEL--------LKNLALSGFRQIHVIDM 443 (805)
T ss_dssp HTCCEEEECCSSHHHHH--------HHHHHTTTCCEEEEEEC
T ss_pred hCCeEEEECCCHHHHHH--------HHHHHHcCCCcEEEECC
Confidence 35789999997543444 56677788888999988
No 483
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=33.50 E-value=45 Score=29.04 Aligned_cols=83 Identities=13% Similarity=0.053 Sum_probs=44.1
Q ss_pred CCC-CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC--c---------e-EEEEcccccc----CCCCc
Q psy9773 46 NIF-AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL--I---------L-EVIQNKIENV----ELPEK 108 (252)
Q Consensus 46 ~~~-~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~--~---------i-~~~~~d~~~~----~~~~~ 108 (252)
... +|.+||-+|+|.=+ .+ ...++...|+ +|++++.. + . .++ |..+. ...+.
T Consensus 183 ~~~~~g~~VlV~GaG~vG-~~-------~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~--~~~~~~~~~~~~~~ 251 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLG-HV-------AVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFL--VSRDQEQMQAAAGT 251 (366)
T ss_dssp TCCCTTCEEEEECCSHHH-HH-------HHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEE--ETTCHHHHHHTTTC
T ss_pred CcCCCCCEEEEECCCHHH-HH-------HHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEE--eccCHHHHHHhhCC
Confidence 455 88999999975311 22 0233334665 68888761 1 1 111 11110 01146
Q ss_pred eeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 109 VDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 109 fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+|+|+..... ... +..+.++|+++|+++...
T Consensus 252 ~D~vid~~g~-----~~~----~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 252 LDGIIDTVSA-----VHP----LLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEEEECCSS-----CCC----SHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCc-----HHH----HHHHHHHHhcCCEEEEEc
Confidence 9999863211 111 233457789999988654
No 484
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=33.35 E-value=1.1e+02 Score=25.14 Aligned_cols=60 Identities=12% Similarity=0.003 Sum_probs=39.6
Q ss_pred CCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCCC------
Q psy9773 49 AGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVELP------ 106 (252)
Q Consensus 49 ~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~~------ 106 (252)
.++++|=.|++.| += --++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 3 ~~k~~lVTGas~G--IG-----~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 74 (264)
T 3tfo_A 3 MDKVILITGASGG--IG-----EGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA 74 (264)
T ss_dssp TTCEEEESSTTSH--HH-----HHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCccH--HH-----HHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4678999998876 21 112455666775 5888876 3567888998765310
Q ss_pred -----CceeEEEecc
Q psy9773 107 -----EKVDIIVSEW 116 (252)
Q Consensus 107 -----~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 75 ~~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 75 AVDTWGRIDVLVNNA 89 (264)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 5789998843
No 485
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=33.19 E-value=88 Score=25.66 Aligned_cols=61 Identities=20% Similarity=0.114 Sum_probs=37.9
Q ss_pred CCCCEEEEEcCC--cCchhhhhccCccchHHHhhcCCCcEEEeeC---------------CceEEEEccccccCC-----
Q psy9773 48 FAGKTVLDVGTG--TGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------------LILEVIQNKIENVEL----- 105 (252)
Q Consensus 48 ~~~~~VLDlGcG--tG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------------~~i~~~~~d~~~~~~----- 105 (252)
..+++||=.|++ .| += --++..+++.|+ +|+.++. ..+.++.+|+.+...
T Consensus 4 l~~k~vlVTGas~~~g--IG-----~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~ 75 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKS--IA-----YGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLY 75 (275)
T ss_dssp TTTCEEEEECCCSTTS--HH-----HHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEECCCCCCc--HH-----HHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHH
Confidence 356889999986 44 11 111444556664 5887764 236778888876521
Q ss_pred ------CCceeEEEecc
Q psy9773 106 ------PEKVDIIVSEW 116 (252)
Q Consensus 106 ------~~~fDlIv~~~ 116 (252)
-+..|++|.+-
T Consensus 76 ~~~~~~~g~id~lv~nA 92 (275)
T 2pd4_A 76 NSVKKDLGSLDFIVHSV 92 (275)
T ss_dssp HHHHHHTSCEEEEEECC
T ss_pred HHHHHHcCCCCEEEECC
Confidence 04789998844
No 486
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=32.83 E-value=91 Score=22.19 Aligned_cols=57 Identities=9% Similarity=0.091 Sum_probs=34.6
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------CceEEEEccccccC----CC-CceeEEEe
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------LILEVIQNKIENVE----LP-EKVDIIVS 114 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------~~i~~~~~d~~~~~----~~-~~fDlIv~ 114 (252)
+++|+=+|+|.=+..+ ...+...|. +|+.+|. ....++.+|..+.. .. ..+|+|+.
T Consensus 6 ~~~v~I~G~G~iG~~~--------a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 76 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSI--------VKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIV 76 (144)
T ss_dssp CCSEEEECCSHHHHHH--------HHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred CCcEEEECCCHHHHHH--------HHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEE
Confidence 4679999986543333 445555663 5888877 23456667765431 11 46899987
Q ss_pred c
Q psy9773 115 E 115 (252)
Q Consensus 115 ~ 115 (252)
.
T Consensus 77 ~ 77 (144)
T 2hmt_A 77 A 77 (144)
T ss_dssp C
T ss_pred C
Confidence 3
No 487
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=32.54 E-value=16 Score=32.52 Aligned_cols=25 Identities=16% Similarity=0.162 Sum_probs=22.0
Q ss_pred hHHHHHHHHhccccCCeEEEeeccc
Q psy9773 126 MIDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 126 ~~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
.+..+|..+.++|+|||+|++.+.+
T Consensus 252 ~L~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 252 EIEQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecC
Confidence 6888899999999999999988765
No 488
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=32.52 E-value=1.7e+02 Score=22.43 Aligned_cols=55 Identities=15% Similarity=0.201 Sum_probs=36.0
Q ss_pred EEEEEcCC--cCchhhhhccCccchHHHhhcCCCcEEEeeC---------CceEEEEccccccCCC--CceeEEEecc
Q psy9773 52 TVLDVGTG--TGKSILLQGHGVDHHSFCTKVHPLDHYAPQY---------LILEVIQNKIENVELP--EKVDIIVSEW 116 (252)
Q Consensus 52 ~VLDlGcG--tG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~---------~~i~~~~~d~~~~~~~--~~fDlIv~~~ 116 (252)
+||=.|+. .|+.+ ...++..| .+|++++. .++.++.+|+.+.... ..+|+||...
T Consensus 2 kvlVtGatG~iG~~l---------~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~a 69 (221)
T 3ew7_A 2 KIGIIGATGRAGSRI---------LEEAKNRG-HEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAY 69 (221)
T ss_dssp EEEEETTTSHHHHHH---------HHHHHHTT-CEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECC
T ss_pred eEEEEcCCchhHHHH---------HHHHHhCC-CEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECC
Confidence 57777753 23222 34455566 46888876 4688999999876433 5689998743
No 489
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=32.51 E-value=45 Score=28.34 Aligned_cols=85 Identities=14% Similarity=0.037 Sum_probs=44.8
Q ss_pred CCCCCCC-EEEEEcCCcCchhhhhccCccchHHHhh-cCCCcEEEeeC----------Cce-EEEEc-cc-cc-c-CC-C
Q psy9773 45 PNIFAGK-TVLDVGTGTGKSILLQGHGVDHHSFCTK-VHPLDHYAPQY----------LIL-EVIQN-KI-EN-V-EL-P 106 (252)
Q Consensus 45 ~~~~~~~-~VLDlGcGtG~~~ll~~~~v~~s~~~a~-~g~~~v~gvD~----------~~i-~~~~~-d~-~~-~-~~-~ 106 (252)
....++. +||-+|++.|--.+ ...+++ .|+ +|++++. ... .++.. +. .. . .. .
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~--------~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~ 214 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSL--------AVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDK 214 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHH--------HHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC---------CCS
T ss_pred cCCCCCCceEEEecCCCHHHHH--------HHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcC
Confidence 3456665 89999983331133 333333 665 5888876 111 11211 11 00 0 01 1
Q ss_pred CceeEEEecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 107 EKVDIIVSEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 107 ~~fDlIv~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
+.+|+|+-... . . .+..+.++|+++|+++...
T Consensus 215 ~~~d~vid~~g-----~-~----~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 215 QRWAAAVDPVG-----G-R----TLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CCEEEEEECST-----T-T----THHHHHHTEEEEEEEEECS
T ss_pred CcccEEEECCc-----H-H----HHHHHHHhhccCCEEEEEe
Confidence 46999876321 1 1 2455568899999998754
No 490
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=31.97 E-value=77 Score=26.45 Aligned_cols=62 Identities=15% Similarity=0.086 Sum_probs=43.4
Q ss_pred CCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC----------------CceEEEEccccccCC-----
Q psy9773 47 IFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY----------------LILEVIQNKIENVEL----- 105 (252)
Q Consensus 47 ~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~----------------~~i~~~~~d~~~~~~----- 105 (252)
...|+++|=-|++.| += --++..+++.|+ +|+.+|. .++.++++|+.+...
T Consensus 6 ~L~gKvalVTGas~G--IG-----~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~ 77 (255)
T 4g81_D 6 DLTGKTALVTGSARG--LG-----FAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAF 77 (255)
T ss_dssp CCTTCEEEETTCSSH--HH-----HHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCcH--HH-----HHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence 457899999998887 31 122555677775 6888887 467788888876521
Q ss_pred -----C-CceeEEEecc
Q psy9773 106 -----P-EKVDIIVSEW 116 (252)
Q Consensus 106 -----~-~~fDlIv~~~ 116 (252)
. +..|++|.+-
T Consensus 78 ~~~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 78 SKLDAEGIHVDILINNA 94 (255)
T ss_dssp HHHHHTTCCCCEEEECC
T ss_pred HHHHHHCCCCcEEEECC
Confidence 1 6799999843
No 491
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=31.92 E-value=1.8e+02 Score=23.51 Aligned_cols=82 Identities=10% Similarity=0.012 Sum_probs=47.8
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC-----------ceEEEEccccccCCCCceeEEEecccc
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL-----------ILEVIQNKIENVELPEKVDIIVSEWMG 118 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~-----------~i~~~~~d~~~~~~~~~fDlIv~~~~~ 118 (252)
+.+|.=+|||.=+..+ +..++..|...|+.+|.. .+.+ ..+..... ...|+|+...-
T Consensus 10 ~m~i~iiG~G~mG~~~--------a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~--~~~Dvvi~av~- 77 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNL--------AKALYRKGFRIVQVYSRTEESARELAQKVEAEY-TTDLAEVN--PYAKLYIVSLK- 77 (266)
T ss_dssp GCCEEEECCSHHHHHH--------HHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEE-ESCGGGSC--SCCSEEEECCC-
T ss_pred CCeEEEEcCCHHHHHH--------HHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCce-eCCHHHHh--cCCCEEEEecC-
Confidence 4578899998643444 455555664337788771 3322 12322221 45899987331
Q ss_pred cccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 119 FYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 119 ~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
......++..+...+++|.+++-..
T Consensus 78 -----~~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 78 -----DSAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp -----HHHHHHHHHHHHTTCCTTCEEEECC
T ss_pred -----HHHHHHHHHHHHhhcCCCcEEEECC
Confidence 1234677777877888887766543
No 492
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=31.89 E-value=1.4e+02 Score=23.74 Aligned_cols=95 Identities=15% Similarity=-0.056 Sum_probs=53.8
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP---- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~---- 106 (252)
..++++|=.|++.| += -.++..+++.|+ +|+.++. .++.++.+|+.+...-
T Consensus 5 l~~k~vlITGas~g--IG-----~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 76 (255)
T 3icc_A 5 LKGKVALVTGASRG--IG-----RAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALY 76 (255)
T ss_dssp TTTCEEEETTCSSH--HH-----HHHHHHHHHTTC-EEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred cCCCEEEEECCCCh--HH-----HHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHH
Confidence 45788999998876 21 112455666774 5666533 3567788888765210
Q ss_pred -------------CceeEEEecccccccC-----Chhh-----------HHHHHHHHhccccCCeEEEeeccc
Q psy9773 107 -------------EKVDIIVSEWMGFYLL-----HESM-----------IDSVIFARDKFLKPEGVMYPYKCI 150 (252)
Q Consensus 107 -------------~~fDlIv~~~~~~~l~-----~~~~-----------~~~~l~~l~~~LkpgG~lv~~~~~ 150 (252)
+..|++|.+-...... .... ...+++.+.+.|+++|+++.....
T Consensus 77 ~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~ 149 (255)
T 3icc_A 77 SSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA 149 (255)
T ss_dssp HHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred HHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCCh
Confidence 2389998843221110 1111 223445556677778888765543
No 493
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=31.85 E-value=94 Score=25.40 Aligned_cols=62 Identities=15% Similarity=0.170 Sum_probs=38.3
Q ss_pred CCCCEEEEEcC-CcCchhhhhccCccchHHHhhcCCCcEEEeeC--------------CceEEEEccccccCC-----C-
Q psy9773 48 FAGKTVLDVGT-GTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------------LILEVIQNKIENVEL-----P- 106 (252)
Q Consensus 48 ~~~~~VLDlGc-GtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------------~~i~~~~~d~~~~~~-----~- 106 (252)
..++++|=.|+ |+|++-. .++..+++.|+ +|+.++. .++.++.+|+.+... .
T Consensus 5 l~~k~vlVTGa~~s~gIG~------aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAF------HIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGR 77 (269)
T ss_dssp TTTCEEEECCCSSTTSHHH------HHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCchHH------HHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHH
Confidence 45788999998 2332211 12445566674 5877765 246678888876521 0
Q ss_pred -----C---ceeEEEecc
Q psy9773 107 -----E---KVDIIVSEW 116 (252)
Q Consensus 107 -----~---~fDlIv~~~ 116 (252)
+ .+|++|.+-
T Consensus 78 ~~~~~g~~~~iD~lv~nA 95 (269)
T 2h7i_A 78 VTEAIGAGNKLDGVVHSI 95 (269)
T ss_dssp HHHHHCTTCCEEEEEECC
T ss_pred HHHHhCCCCCceEEEECC
Confidence 3 799998843
No 494
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=31.85 E-value=54 Score=27.37 Aligned_cols=50 Identities=12% Similarity=-0.051 Sum_probs=28.3
Q ss_pred CCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCCceEEEEccccccCCC-----CceeEEEe
Q psy9773 50 GKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYLILEVIQNKIENVELP-----EKVDIIVS 114 (252)
Q Consensus 50 ~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~~i~~~~~d~~~~~~~-----~~fDlIv~ 114 (252)
..+++||-||-|+ -|..+|... + .-.....++.+|+.++... +.+|+|+.
T Consensus 33 ~~~vidLFaGig~--Gl~~aGf~~-----~--------~N~~~~~~~~~DI~~i~~~~i~~~~~~DlliG 87 (230)
T 2qrv_B 33 PVRVLSLFEDIKK--ELTSLGFLE-----S--------GSDPGQLKHVVDVTDTVRKDVEEWGPFDLVYG 87 (230)
T ss_dssp CCCEEEESSCCTT--TTTTTTSCC------------------CCEEEESCCTTCCHHHHHHTCCCSEEEE
T ss_pred CceEEEeccChhH--HHHHCCCch-----h--------hcCCCCcEecCChhhCCHhHhcccCCCCEEEE
Confidence 4579999999872 222222221 0 0001223567888887432 47999988
No 495
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=31.61 E-value=2.1e+02 Score=23.23 Aligned_cols=61 Identities=11% Similarity=0.047 Sum_probs=40.7
Q ss_pred CCCCCEEEEEcCCc--CchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCC--
Q psy9773 47 IFAGKTVLDVGTGT--GKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVEL-- 105 (252)
Q Consensus 47 ~~~~~~VLDlGcGt--G~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~-- 105 (252)
...|+++|=-|+++ | += --++..+++.|+ +|+.++. .++.++++|+.+...
T Consensus 3 ~l~gK~alVTGaa~~~G--IG-----~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 74 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRS--IA-----FGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVI 74 (256)
T ss_dssp CCTTCEEEEECCCSTTC--HH-----HHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHH
T ss_pred CCCCCEEEEECCCCCch--HH-----HHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHH
Confidence 35789999999643 4 11 011556677885 5887776 367788999876521
Q ss_pred -------C--CceeEEEec
Q psy9773 106 -------P--EKVDIIVSE 115 (252)
Q Consensus 106 -------~--~~fDlIv~~ 115 (252)
. +..|+++.+
T Consensus 75 ~~~~~~~~~~G~iD~lvnn 93 (256)
T 4fs3_A 75 NGFEQIGKDVGNIDGVYHS 93 (256)
T ss_dssp HHHHHHHHHHCCCSEEEEC
T ss_pred HHHHHHHHHhCCCCEEEec
Confidence 0 689999874
No 496
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=31.50 E-value=1.2e+02 Score=25.40 Aligned_cols=84 Identities=11% Similarity=0.135 Sum_probs=48.4
Q ss_pred CCCCCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC----------ceEEEE-ccccccCCCCceeEEE
Q psy9773 45 PNIFAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL----------ILEVIQ-NKIENVELPEKVDIIV 113 (252)
Q Consensus 45 ~~~~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~----------~i~~~~-~d~~~~~~~~~fDlIv 113 (252)
.....+++|+=+|+|.=+..+ +..+...|+ +|+++|.. .+.... .++..+ -...|+|+
T Consensus 152 ~~~l~g~~v~IiG~G~iG~~~--------a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~--l~~aDvVi 220 (300)
T 2rir_A 152 DYTIHGSQVAVLGLGRTGMTI--------ARTFAALGA-NVKVGARSSAHLARITEMGLVPFHTDELKEH--VKDIDICI 220 (300)
T ss_dssp SSCSTTSEEEEECCSHHHHHH--------HHHHHHTTC-EEEEEESSHHHHHHHHHTTCEEEEGGGHHHH--STTCSEEE
T ss_pred CCCCCCCEEEEEcccHHHHHH--------HHHHHHCCC-EEEEEECCHHHHHHHHHCCCeEEchhhHHHH--hhCCCEEE
Confidence 345678999999997643333 444555665 79999872 122221 111111 15689998
Q ss_pred ecccccccCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 114 SEWMGFYLLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 114 ~~~~~~~l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
.....+.+ .. ...+.++||++++-..
T Consensus 221 ~~~p~~~i-~~--------~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 221 NTIPSMIL-NQ--------TVLSSMTPKTLILDLA 246 (300)
T ss_dssp ECCSSCCB-CH--------HHHTTSCTTCEEEECS
T ss_pred ECCChhhh-CH--------HHHHhCCCCCEEEEEe
Confidence 85543322 11 1236789998876544
No 497
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=31.20 E-value=1.2e+02 Score=27.15 Aligned_cols=61 Identities=15% Similarity=0.022 Sum_probs=38.7
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC--------------CceEEEEccccccCCCCceeEEE
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY--------------LILEVIQNKIENVELPEKVDIIV 113 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~--------------~~i~~~~~d~~~~~~~~~fDlIv 113 (252)
..+++|+=+|.|..+... +.++++.| .+|++.|. ..+.+..+....-.+.+.+|+||
T Consensus 7 ~~~k~v~viG~G~sG~s~--------A~~l~~~G-~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv 77 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAA--------ARLLAKLG-AIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMI 77 (451)
T ss_dssp TTTCEEEEECCTTTHHHH--------HHHHHHTT-CEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEE
T ss_pred cCCCEEEEEeeCHHHHHH--------HHHHHhCC-CEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEE
Confidence 467899999987664444 66777787 57999997 23555544322111112389998
Q ss_pred eccc
Q psy9773 114 SEWM 117 (252)
Q Consensus 114 ~~~~ 117 (252)
.++.
T Consensus 78 ~spg 81 (451)
T 3lk7_A 78 KNPG 81 (451)
T ss_dssp ECTT
T ss_pred ECCc
Confidence 8554
No 498
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=31.00 E-value=64 Score=27.17 Aligned_cols=80 Identities=14% Similarity=0.081 Sum_probs=50.0
Q ss_pred CEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeCC----------ceEEEEccccccCCCCceeEEEecccccc
Q psy9773 51 KTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYL----------ILEVIQNKIENVELPEKVDIIVSEWMGFY 120 (252)
Q Consensus 51 ~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~----------~i~~~~~d~~~~~~~~~fDlIv~~~~~~~ 120 (252)
.+|.=||+|.=+..+ +..+++.| .+|+++|.. .+.+ ..+..++. . .|+|+..
T Consensus 16 ~~I~vIG~G~mG~~~--------A~~l~~~G-~~V~~~dr~~~~~~~~~~~g~~~-~~~~~~~~--~-aDvvi~~----- 77 (296)
T 3qha_A 16 LKLGYIGLGNMGAPM--------ATRMTEWP-GGVTVYDIRIEAMTPLAEAGATL-ADSVADVA--A-ADLIHIT----- 77 (296)
T ss_dssp CCEEEECCSTTHHHH--------HHHHTTST-TCEEEECSSTTTSHHHHHTTCEE-CSSHHHHT--T-SSEEEEC-----
T ss_pred CeEEEECcCHHHHHH--------HHHHHHCC-CeEEEEeCCHHHHHHHHHCCCEE-cCCHHHHH--h-CCEEEEE-----
Confidence 578889999765555 66666666 469998881 1211 11111111 4 7998762
Q ss_pred cCChhhHHHHHHHHhccccCCeEEEeec
Q psy9773 121 LLHESMIDSVIFARDKFLKPEGVMYPYK 148 (252)
Q Consensus 121 l~~~~~~~~~l~~l~~~LkpgG~lv~~~ 148 (252)
++.......++..+...|+||.+++-..
T Consensus 78 vp~~~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 78 VLDDAQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp CSSHHHHHHHHHHHHTTCCTTCEEEECS
T ss_pred CCChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 2334456777888888899888776543
No 499
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=30.86 E-value=1.2e+02 Score=24.66 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=41.4
Q ss_pred CCCCEEEEEcCCcCchhhhhccCccchHHHhhcCCCcEEEeeC-----------------CceEEEEccccccCCC----
Q psy9773 48 FAGKTVLDVGTGTGKSILLQGHGVDHHSFCTKVHPLDHYAPQY-----------------LILEVIQNKIENVELP---- 106 (252)
Q Consensus 48 ~~~~~VLDlGcGtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~-----------------~~i~~~~~d~~~~~~~---- 106 (252)
..++++|=.|++.| += --++..+++.|+ +|+.++. .++.++++|+.+...-
T Consensus 18 l~~k~vlVTGas~g--IG-----~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~ 89 (266)
T 4egf_A 18 LDGKRALITGATKG--IG-----ADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELA 89 (266)
T ss_dssp CTTCEEEETTTTSH--HH-----HHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHH
T ss_pred CCCCEEEEeCCCcH--HH-----HHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence 46789999998776 21 112455666775 5888876 3578899999876421
Q ss_pred -------CceeEEEecc
Q psy9773 107 -------EKVDIIVSEW 116 (252)
Q Consensus 107 -------~~fDlIv~~~ 116 (252)
+..|++|.+-
T Consensus 90 ~~~~~~~g~id~lv~nA 106 (266)
T 4egf_A 90 RRAAEAFGGLDVLVNNA 106 (266)
T ss_dssp HHHHHHHTSCSEEEEEC
T ss_pred HHHHHHcCCCCEEEECC
Confidence 4789998843
No 500
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=30.84 E-value=1.1e+02 Score=25.40 Aligned_cols=81 Identities=14% Similarity=0.104 Sum_probs=46.3
Q ss_pred CEEEEEcC-CcCchhhhhccCccchHHHhhcCCCcEEEeeCCc--eEEE--E-ccccccCC-CCceeEEEecccccccCC
Q psy9773 51 KTVLDVGT-GTGKSILLQGHGVDHHSFCTKVHPLDHYAPQYLI--LEVI--Q-NKIENVEL-PEKVDIIVSEWMGFYLLH 123 (252)
Q Consensus 51 ~~VLDlGc-GtG~~~ll~~~~v~~s~~~a~~g~~~v~gvD~~~--i~~~--~-~d~~~~~~-~~~fDlIv~~~~~~~l~~ 123 (252)
.+|.=+|+ |.=+..+ +..++..| .+|+++|... ..-. . .+..+... -...|+|+... .
T Consensus 12 m~I~iIG~tG~mG~~l--------a~~l~~~g-~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av------~ 76 (286)
T 3c24_A 12 KTVAILGAGGKMGARI--------TRKIHDSA-HHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLAL------P 76 (286)
T ss_dssp CEEEEETTTSHHHHHH--------HHHHHHSS-SEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECS------C
T ss_pred CEEEEECCCCHHHHHH--------HHHHHhCC-CEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcC------C
Confidence 47999999 8643444 45555666 4688888711 0000 0 01111110 14689998732 1
Q ss_pred hhhHHHHHHHHhccccCCeEEEe
Q psy9773 124 ESMIDSVIFARDKFLKPEGVMYP 146 (252)
Q Consensus 124 ~~~~~~~l~~l~~~LkpgG~lv~ 146 (252)
......++..+...++||.+++-
T Consensus 77 ~~~~~~v~~~l~~~l~~~~ivv~ 99 (286)
T 3c24_A 77 DNIIEKVAEDIVPRVRPGTIVLI 99 (286)
T ss_dssp HHHHHHHHHHHGGGSCTTCEEEE
T ss_pred chHHHHHHHHHHHhCCCCCEEEE
Confidence 23467788888888888877664
Done!