Your job contains 1 sequence.
>psy9775
MRIATGASMVEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISL
EDVELVHFERVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWLKPHSHGSSEST
DMSSLSSNQMSFR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9775
(133 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002183 - symbol:dre4 "dre4" species:7227 "Drosoph... 456 4.9e-42 1
ZFIN|ZDB-GENE-031118-96 - symbol:supt16h "suppressor of T... 404 1.8e-36 1
UNIPROTKB|E1BNP8 - symbol:SUPT16H "Uncharacterized protei... 400 4.6e-36 1
UNIPROTKB|E2REU7 - symbol:SUPT16H "Uncharacterized protei... 400 4.6e-36 1
UNIPROTKB|Q9Y5B9 - symbol:SUPT16H "FACT complex subunit S... 400 4.6e-36 1
MGI|MGI:1890948 - symbol:Supt16 "suppressor of Ty 16" spe... 400 4.6e-36 1
RGD|1310032 - symbol:Supt16h "suppressor of Ty 16 homolog... 400 4.6e-36 1
UNIPROTKB|F1S8K5 - symbol:SUPT16H "Uncharacterized protei... 400 4.6e-36 1
UNIPROTKB|Q9W603 - symbol:supt16h "FACT complex subunit S... 396 1.2e-35 1
WB|WBGene00018849 - symbol:F55A3.3 species:6239 "Caenorha... 343 5.6e-30 1
POMBASE|SPBP8B7.19 - symbol:spt16 "FACT complex subunit S... 314 7.0e-27 1
ASPGD|ASPL0000031805 - symbol:AN5102 species:162425 "Emer... 303 1.0e-25 1
CGD|CAL0005222 - symbol:CDC68 species:5476 "Candida albic... 296 6.3e-25 1
UNIPROTKB|Q5A1D5 - symbol:SPT16 "FACT complex subunit SPT... 296 6.3e-25 1
DICTYBASE|DDB_G0282677 - symbol:spt16 "FACT complex subun... 265 1.3e-21 1
TAIR|locus:2132756 - symbol:SPT16 "global transcription f... 262 2.7e-21 1
SGD|S000003175 - symbol:SPT16 "Subunit of the heterodimer... 261 3.3e-21 1
TAIR|locus:2139217 - symbol:GTC2 species:3702 "Arabidopsi... 212 4.2e-17 1
>FB|FBgn0002183 [details] [associations]
symbol:dre4 "dre4" species:7227 "Drosophila melanogaster"
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0001672 "regulation of
chromatin assembly or disassembly" evidence=IMP] [GO:0035101 "FACT
complex" evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005694 EMBL:AE014296
GO:GO:0022008 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0003682 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0032968
GO:GO:0001672 GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 OMA:GARYKNY EMBL:AF023269
EMBL:AF023270 EMBL:BT010116 EMBL:AB083008 PIR:T13928 PIR:T13929
RefSeq:NP_476610.2 RefSeq:NP_728686.2 UniGene:Dm.5723
ProteinModelPortal:Q8IRG6 SMR:Q8IRG6 STRING:Q8IRG6 PaxDb:Q8IRG6
EnsemblMetazoa:FBtr0072865 GeneID:38248 KEGG:dme:Dmel_CG1828
CTD:38248 FlyBase:FBgn0002183 InParanoid:Q8IRG6 OrthoDB:EOG40CFXV
GenomeRNAi:38248 NextBio:807718 Bgee:Q8IRG6 GermOnline:CG1828
Uniprot:Q8IRG6
Length = 1083
Score = 456 (165.6 bits), Expect = 4.9e-42, P = 4.9e-42
Identities = 82/100 (82%), Positives = 93/100 (93%)
Query: 10 VEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFE 69
VE +TK +EFDTPFRELGFPGAP+RSTV LQPTSG LVNLTEWPPFVI+L+DVELVHFE
Sbjct: 793 VETMTKSVVEFDTPFRELGFPGAPFRSTVTLQPTSGSLVNLTEWPPFVITLDDVELVHFE 852
Query: 70 RVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
RVQF L+NFDM+FVFK+Y++KV M+NAIPMNMLDHVKEWL
Sbjct: 853 RVQFHLRNFDMIFVFKEYNKKVAMVNAIPMNMLDHVKEWL 892
>ZFIN|ZDB-GENE-031118-96 [details] [associations]
symbol:supt16h "suppressor of Ty 16 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0009987 "cellular
process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000994 Pfam:PF00557 ZFIN:ZDB-GENE-031118-96
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 EMBL:BX248243 EMBL:CABZ01078837
IPI:IPI00997833 Ensembl:ENSDART00000126840 ArrayExpress:E7F5E9
Bgee:E7F5E9 Uniprot:E7F5E9
Length = 1077
Score = 404 (147.3 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 71/100 (71%), Positives = 88/100 (88%)
Query: 10 VEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFE 69
VE +TK+E+EF+ PFR+LGF GAPYRST LLQPTS L N+TEWPPFV++L++VELVHFE
Sbjct: 832 VESLTKEELEFEVPFRDLGFQGAPYRSTCLLQPTSSSLCNVTEWPPFVVTLDEVELVHFE 891
Query: 70 RVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
RVQF LKNFD+V V+KDY++KV MINA+P+N LD +KEWL
Sbjct: 892 RVQFHLKNFDVVIVYKDYNKKVTMINAVPVNSLDPIKEWL 931
>UNIPROTKB|E1BNP8 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009987 "cellular process" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512 CTD:11198 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 GeneTree:ENSGT00390000014495
EMBL:DAAA02028315 IPI:IPI00696830 RefSeq:NP_001179321.1
UniGene:Bt.2157 PRIDE:E1BNP8 Ensembl:ENSBTAT00000027214
GeneID:514989 KEGG:bta:514989 NextBio:20871607 Uniprot:E1BNP8
Length = 1047
Score = 400 (145.9 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 72/100 (72%), Positives = 86/100 (86%)
Query: 10 VEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFE 69
VE +TK+E+EF+ PFR+LGF GAPYRST LLQPTS LVN TEWPPFV++L++VEL+HFE
Sbjct: 787 VEALTKEELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNATEWPPFVVTLDEVELIHFE 846
Query: 70 RVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
RVQF LKNFDMV V+KDY +KV MINAIP+ LD +KEWL
Sbjct: 847 RVQFHLKNFDMVIVYKDYSKKVTMINAIPVASLDPIKEWL 886
>UNIPROTKB|E2REU7 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0009987 "cellular process"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512
CTD:11198 OMA:MEIIDAD InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 EMBL:AAEX03009852 RefSeq:XP_851566.1
Ensembl:ENSCAFT00000009018 GeneID:612874 KEGG:cfa:612874
NextBio:20898360 Uniprot:E2REU7
Length = 1047
Score = 400 (145.9 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 72/100 (72%), Positives = 86/100 (86%)
Query: 10 VEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFE 69
VE +TK+E+EF+ PFR+LGF GAPYRST LLQPTS LVN TEWPPFV++L++VEL+HFE
Sbjct: 787 VEALTKEELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNATEWPPFVVTLDEVELIHFE 846
Query: 70 RVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
RVQF LKNFDMV V+KDY +KV MINAIP+ LD +KEWL
Sbjct: 847 RVQFHLKNFDMVIVYKDYSKKVTMINAIPVASLDPIKEWL 886
>UNIPROTKB|Q9Y5B9 [details] [associations]
symbol:SUPT16H "FACT complex subunit SPT16" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=TAS]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0050434 "positive regulation of viral transcription"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000994 Pfam:PF00557
Reactome:REACT_116125 GO:GO:0005694 GO:GO:0005654 GO:GO:0016032
GO:GO:0006260 GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0006337 Reactome:REACT_1788 GO:GO:0050434
Reactome:REACT_1892 GO:GO:0032786 InterPro:IPR013719 Pfam:PF08512
EMBL:AF152961 EMBL:BC000565 EMBL:BC014046 EMBL:BC064561
EMBL:BC073849 EMBL:AF164924 IPI:IPI00026970 RefSeq:NP_009123.1
UniGene:Hs.213724 ProteinModelPortal:Q9Y5B9 SMR:Q9Y5B9
DIP:DIP-42757N IntAct:Q9Y5B9 MINT:MINT-2823866 STRING:Q9Y5B9
MEROPS:M24.974 PhosphoSite:Q9Y5B9 DMDM:74753511 PaxDb:Q9Y5B9
PeptideAtlas:Q9Y5B9 PRIDE:Q9Y5B9 Ensembl:ENST00000216297
GeneID:11198 KEGG:hsa:11198 UCSC:uc001wao.2 CTD:11198
GeneCards:GC14M021819 HGNC:HGNC:11465 HPA:CAB022551 MIM:605012
neXtProt:NX_Q9Y5B9 PharmGKB:PA36251 eggNOG:COG5406
HOGENOM:HOG000209079 HOVERGEN:HBG092544 InParanoid:Q9Y5B9
OMA:MEIIDAD OrthoDB:EOG40K7Z3 PhylomeDB:Q9Y5B9 ChiTaRS:SUPT16H
GenomeRNAi:11198 NextBio:42621 ArrayExpress:Q9Y5B9 Bgee:Q9Y5B9
CleanEx:HS_SUPT16H Genevestigator:Q9Y5B9 GermOnline:ENSG00000092201
InterPro:IPR013953 Pfam:PF08644 Uniprot:Q9Y5B9
Length = 1047
Score = 400 (145.9 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 72/100 (72%), Positives = 86/100 (86%)
Query: 10 VEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFE 69
VE +TK+E+EF+ PFR+LGF GAPYRST LLQPTS LVN TEWPPFV++L++VEL+HFE
Sbjct: 787 VEALTKEELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNATEWPPFVVTLDEVELIHFE 846
Query: 70 RVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
RVQF LKNFDMV V+KDY +KV MINAIP+ LD +KEWL
Sbjct: 847 RVQFHLKNFDMVIVYKDYSKKVTMINAIPVASLDPIKEWL 886
>MGI|MGI:1890948 [details] [associations]
symbol:Supt16 "suppressor of Ty 16" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0009987 "cellular process" evidence=IEA] InterPro:IPR000994
Pfam:PF00557 MGI:MGI:1890948 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
Gene3D:3.90.230.10 SUPFAM:SSF55920 InterPro:IPR013719 Pfam:PF08512
UniGene:Mm.21662 MEROPS:M24.974 eggNOG:COG5406 HOGENOM:HOG000209079
HOVERGEN:HBG092544 OrthoDB:EOG40K7Z3 InterPro:IPR013953
Pfam:PF08644 EMBL:AF323667 EMBL:AK148506 EMBL:AK158116
EMBL:BC012433 IPI:IPI00120344 RefSeq:NP_291096.2 UniGene:Mm.489682
ProteinModelPortal:Q920B9 SMR:Q920B9 DIP:DIP-55972N IntAct:Q920B9
STRING:Q920B9 PhosphoSite:Q920B9 PaxDb:Q920B9 PRIDE:Q920B9
GeneID:114741 KEGG:mmu:114741 UCSC:uc007tor.1 CTD:114741
InParanoid:Q920B9 NextBio:368789 CleanEx:MM_SUPT16H
Genevestigator:Q920B9 GermOnline:ENSMUSG00000035726 Uniprot:Q920B9
Length = 1047
Score = 400 (145.9 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 72/100 (72%), Positives = 86/100 (86%)
Query: 10 VEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFE 69
VE +TK+E+EF+ PFR+LGF GAPYRST LLQPTS LVN TEWPPFV++L++VEL+HFE
Sbjct: 787 VEALTKEELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNATEWPPFVVTLDEVELIHFE 846
Query: 70 RVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
RVQF LKNFDMV V+KDY +KV MINAIP+ LD +KEWL
Sbjct: 847 RVQFHLKNFDMVIVYKDYSKKVTMINAIPVASLDPIKEWL 886
>RGD|1310032 [details] [associations]
symbol:Supt16h "suppressor of Ty 16 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0009987 "cellular process"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557 RGD:1310032
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 EMBL:CH474040
InterPro:IPR013719 Pfam:PF08512 CTD:11198 OMA:MEIIDAD
OrthoDB:EOG40K7Z3 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 IPI:IPI00869870 RefSeq:NP_001100731.1
UniGene:Rn.93187 Ensembl:ENSRNOT00000016288 GeneID:305851
KEGG:rno:305851 UCSC:RGD:1310032 NextBio:655127 Uniprot:D4A4J0
Length = 1047
Score = 400 (145.9 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 72/100 (72%), Positives = 86/100 (86%)
Query: 10 VEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFE 69
VE +TK+E+EF+ PFR+LGF GAPYRST LLQPTS LVN TEWPPFV++L++VEL+HFE
Sbjct: 787 VEALTKEELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNATEWPPFVVTLDEVELIHFE 846
Query: 70 RVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
RVQF LKNFDMV V+KDY +KV MINAIP+ LD +KEWL
Sbjct: 847 RVQFHLKNFDMVIVYKDYSKKVTMINAIPVASLDPIKEWL 886
>UNIPROTKB|F1S8K5 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009987 "cellular process" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 GeneTree:ENSGT00390000014495
EMBL:CT797461 Ensembl:ENSSSCT00000031400 Uniprot:F1S8K5
Length = 1048
Score = 400 (145.9 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 72/100 (72%), Positives = 86/100 (86%)
Query: 10 VEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFE 69
VE +TK+E+EF+ PFR+LGF GAPYRST LLQPTS LVN TEWPPFV++L++VEL+HFE
Sbjct: 788 VEALTKEELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNATEWPPFVVTLDEVELIHFE 847
Query: 70 RVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
RVQF LKNFDMV V+KDY +KV MINAIP+ LD +KEWL
Sbjct: 848 RVQFHLKNFDMVIVYKDYSKKVTMINAIPVASLDPIKEWL 887
>UNIPROTKB|Q9W603 [details] [associations]
symbol:supt16h "FACT complex subunit SPT16" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
Gene3D:3.90.230.10 SUPFAM:SSF55920 InterPro:IPR013719 Pfam:PF08512
CTD:11198 HOVERGEN:HBG092544 InterPro:IPR013953 Pfam:PF08644
EMBL:AB004794 EMBL:BC072746 RefSeq:NP_001084166.1 UniGene:Xl.7983
ProteinModelPortal:Q9W603 PRIDE:Q9W603 GeneID:399345
KEGG:xla:399345 Xenbase:XB-GENE-979310 Uniprot:Q9W603
Length = 1035
Score = 396 (144.5 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 72/100 (72%), Positives = 86/100 (86%)
Query: 10 VEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFE 69
VE +TK+++EF+ PFR+LGF GAPYRST LLQPTS LVN TEWPPFV++L++VELVHFE
Sbjct: 789 VESLTKEDLEFEIPFRDLGFNGAPYRSTCLLQPTSSSLVNTTEWPPFVVTLDEVELVHFE 848
Query: 70 RVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
RVQF LKNFDMV V+K+Y +KV MINAIPM LD +KEWL
Sbjct: 849 RVQFHLKNFDMVIVYKEYGKKVTMINAIPMASLDPIKEWL 888
>WB|WBGene00018849 [details] [associations]
symbol:F55A3.3 species:6239 "Caenorhabditis elegans"
[GO:0009987 "cellular process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0051301 "cell
division" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005694 GO:GO:0006355 GO:GO:0006260
GO:GO:0018996 GO:GO:0006281 GO:GO:0006351 GO:GO:0000910
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0006997 GO:GO:0001703
EMBL:FO080793 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406
HOGENOM:HOG000209079 InterPro:IPR013953 Pfam:PF08644
RefSeq:NP_492821.1 ProteinModelPortal:Q9N5R9 SMR:Q9N5R9
STRING:Q9N5R9 PaxDb:Q9N5R9 EnsemblMetazoa:F55A3.3.1
EnsemblMetazoa:F55A3.3.2 GeneID:172984 KEGG:cel:CELE_F55A3.3
UCSC:F55A3.3 CTD:172984 WormBase:F55A3.3
GeneTree:ENSGT00390000014495 InParanoid:Q9N5R9 OMA:GARYKNY
NextBio:877797 Uniprot:Q9N5R9
Length = 1030
Score = 343 (125.8 bits), Expect = 5.6e-30, P = 5.6e-30
Identities = 61/100 (61%), Positives = 75/100 (75%)
Query: 10 VEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFE 69
V +T + EFD+PF LGF G PYRS L+PT+ CLVNLTEWP F+++L +VELVHFE
Sbjct: 787 VSRLTNDQFEFDSPFAGLGFFGVPYRSATTLKPTASCLVNLTEWPTFIVTLSEVELVHFE 846
Query: 70 RVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
RV QLKNFDMVF+FKDY K M+ IPM+ +D +KEWL
Sbjct: 847 RVSLQLKNFDMVFIFKDYKIKPQMVAQIPMSSIDKIKEWL 886
>POMBASE|SPBP8B7.19 [details] [associations]
symbol:spt16 "FACT complex subunit Spt16" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=ISO] [GO:0035101 "FACT
complex" evidence=IDA] [GO:0043486 "histone exchange" evidence=IC]
[GO:0044732 "mitotic spindle pole body" evidence=IDA]
InterPro:IPR000994 Pfam:PF00557 PomBase:SPBP8B7.19 GO:GO:0006355
GO:GO:0044732 EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR
GO:GO:0006261 GO:GO:0000790 GO:GO:0006368 GO:GO:0043486
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0006334 GO:GO:0035101
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079
OMA:MEIIDAD InterPro:IPR013953 Pfam:PF08644 OrthoDB:EOG4QC4DF
PIR:T40813 RefSeq:NP_596526.1 PDB:3CB5 PDB:3CB6 PDBsum:3CB5
PDBsum:3CB6 ProteinModelPortal:O94267 SMR:O94267 DIP:DIP-44081N
STRING:O94267 EnsemblFungi:SPBP8B7.19.1 GeneID:2541355
KEGG:spo:SPBP8B7.19 EvolutionaryTrace:O94267 NextBio:20802464
Uniprot:O94267
Length = 1019
Score = 314 (115.6 bits), Expect = 7.0e-27, P = 7.0e-27
Identities = 58/103 (56%), Positives = 74/103 (71%)
Query: 7 ASMVEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELV 66
A + ++ IE D PFREL F G P+RS VLLQPT+ CLV LT+ P VI+L ++E+
Sbjct: 791 AEKIAEASEGRIELDIPFRELAFNGVPFRSNVLLQPTTDCLVQLTDTPFTVITLNEIEIA 850
Query: 67 HFERVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
H ERVQF LKNFD+VF+F+D+ R + IN IPM LD+VKEWL
Sbjct: 851 HLERVQFGLKNFDLVFIFQDFRRPPIHINTIPMEQLDNVKEWL 893
>ASPGD|ASPL0000031805 [details] [associations]
symbol:AN5102 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0009987 "cellular
process" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0035101 "FACT complex" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
EMBL:BN001305 Gene3D:3.90.230.10 SUPFAM:SSF55920 EMBL:AACD01000088
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079
InterPro:IPR013953 Pfam:PF08644 RefSeq:XP_662706.1 STRING:Q5B2X8
GeneID:2871397 KEGG:ani:AN5102.2 OMA:FENIKHV OrthoDB:EOG4QC4DF
Uniprot:Q5B2X8
Length = 1019
Score = 303 (111.7 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 61/105 (58%), Positives = 75/105 (71%)
Query: 7 ASMVEHVTKQE-IEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPF-VISLEDVE 64
A + K E ++ D PFRE+GF G P RS VL+QPT+ LV LTE PPF VISL ++E
Sbjct: 792 AEKIADAGKDEGVDVDIPFREIGFTGVPNRSNVLIQPTTDALVQLTE-PPFLVISLNEIE 850
Query: 65 LVHFERVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
+ H ERVQF LKNFD+VFVFKD+HR V IN IP+ L+ VK+WL
Sbjct: 851 IAHLERVQFGLKNFDLVFVFKDFHRAPVHINTIPVENLEGVKDWL 895
>CGD|CAL0005222 [details] [associations]
symbol:CDC68 species:5476 "Candida albicans" [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0008023 "transcription elongation factor complex"
evidence=IGI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IGI] [GO:0031298 "replication
fork protection complex" evidence=IEA] [GO:0005816 "spindle pole
body" evidence=IEA] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=IEA] [GO:0035101 "FACT complex" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0034401 "regulation of transcription by
chromatin organization" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0034724 "DNA replication-independent nucleosome
organization" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 CGD:CAL0005222 GO:GO:0005694
GO:GO:0006260 GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0008023 GO:GO:0032784 EMBL:AACQ01000084
EMBL:AACQ01000083 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406
InterPro:IPR013953 Pfam:PF08644 EMBL:AF253047 RefSeq:XP_715540.1
RefSeq:XP_715596.1 ProteinModelPortal:Q5A1D5 STRING:Q5A1D5
GeneID:3642741 GeneID:3642787 KEGG:cal:CaO19.10402
KEGG:cal:CaO19.2884 Uniprot:Q5A1D5
Length = 1060
Score = 296 (109.3 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 54/103 (52%), Positives = 74/103 (71%)
Query: 7 ASMVEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELV 66
A ++ + ++ D PFRELGF G P+RS+VL PT CLV L + P V++LE++E+
Sbjct: 833 AELIADSSHGMVDLDIPFRELGFQGVPFRSSVLCVPTRDCLVQLIDPPYLVVTLEEIEIA 892
Query: 67 HFERVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
H ERVQF LKNFD+VFVFKD+++ VV IN IP+ +L+ VK WL
Sbjct: 893 HLERVQFGLKNFDLVFVFKDFNKPVVHINTIPVELLEDVKSWL 935
>UNIPROTKB|Q5A1D5 [details] [associations]
symbol:SPT16 "FACT complex subunit SPT16" species:237561
"Candida albicans SC5314" [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IGI] [GO:0008023
"transcription elongation factor complex" evidence=IGI] [GO:0032784
"regulation of DNA-dependent transcription, elongation"
evidence=IGI] InterPro:IPR000994 Pfam:PF00557 CGD:CAL0005222
GO:GO:0005694 GO:GO:0006260 GO:GO:0006281 GO:GO:0006368
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0008023 GO:GO:0032784
EMBL:AACQ01000084 EMBL:AACQ01000083 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644 EMBL:AF253047
RefSeq:XP_715540.1 RefSeq:XP_715596.1 ProteinModelPortal:Q5A1D5
STRING:Q5A1D5 GeneID:3642741 GeneID:3642787 KEGG:cal:CaO19.10402
KEGG:cal:CaO19.2884 Uniprot:Q5A1D5
Length = 1060
Score = 296 (109.3 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 54/103 (52%), Positives = 74/103 (71%)
Query: 7 ASMVEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELV 66
A ++ + ++ D PFRELGF G P+RS+VL PT CLV L + P V++LE++E+
Sbjct: 833 AELIADSSHGMVDLDIPFRELGFQGVPFRSSVLCVPTRDCLVQLIDPPYLVVTLEEIEIA 892
Query: 67 HFERVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
H ERVQF LKNFD+VFVFKD+++ VV IN IP+ +L+ VK WL
Sbjct: 893 HLERVQFGLKNFDLVFVFKDFNKPVVHINTIPVELLEDVKSWL 935
>DICTYBASE|DDB_G0282677 [details] [associations]
symbol:spt16 "FACT complex subunit SPT16"
species:44689 "Dictyostelium discoideum" [GO:0009987 "cellular
process" evidence=IEA] [GO:0035101 "FACT complex" evidence=ISS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISS] [GO:0001672 "regulation of chromatin
assembly or disassembly" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557
dictyBase:DDB_G0282677 GO:GO:0005694 GO:GO:0006355
EMBL:AAFI02000047 GenomeReviews:CM000152_GR GO:GO:0006260
GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0001672 GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644 OMA:GARYKNY
RefSeq:XP_640196.1 ProteinModelPortal:Q54S43 STRING:Q54S43
EnsemblProtists:DDB0231753 GeneID:8623736 KEGG:ddi:DDB_G0282677
Uniprot:Q54S43
Length = 1072
Score = 265 (98.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 52/101 (51%), Positives = 70/101 (69%)
Query: 10 VEHVTKQE-IEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHF 68
VE + + +EFD P+RELGF G P STV +QP+ CL+++ E P FV++L+DVE+ F
Sbjct: 804 VEEIAPEPGLEFDVPYRELGFYGVPNVSTVFIQPSVHCLLSILEPPFFVLTLDDVEIACF 863
Query: 69 ERVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
ER LKNFD+ FVFKDY+R + I+ IP N + VKEWL
Sbjct: 864 ERAIRSLKNFDLSFVFKDYNRPPIRISVIPRNYFETVKEWL 904
>TAIR|locus:2132756 [details] [associations]
symbol:SPT16 "global transcription factor C" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0009987 "cellular process" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005719 "nuclear euchromatin"
evidence=IDA] [GO:0035101 "FACT complex" evidence=IDA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0007346
"regulation of mitotic cell cycle" evidence=RCA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR000994
Pfam:PF00557 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0010228 GO:GO:0005719 Gene3D:3.90.230.10 SUPFAM:SSF55920
EMBL:AF080119 EMBL:AL161518 GO:GO:0035101 InterPro:IPR013719
Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 EMBL:AB493678 IPI:IPI00520940
PIR:T01906 RefSeq:NP_192809.1 UniGene:At.27606
ProteinModelPortal:O82491 SMR:O82491 STRING:O82491 PaxDb:O82491
PRIDE:O82491 EnsemblPlants:AT4G10710.1 GeneID:826665
KEGG:ath:AT4G10710 TAIR:At4g10710 InParanoid:O82491
PhylomeDB:O82491 ProtClustDB:CLSN2686053 Genevestigator:O82491
GermOnline:AT4G10710 Uniprot:O82491
Length = 1074
Score = 262 (97.3 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 44/93 (47%), Positives = 68/93 (73%)
Query: 17 EIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFERVQFQLK 76
++EFD P RELGF G P++++ + PTS CLV L E+P V+SL ++E+V+ ERV F K
Sbjct: 821 DLEFDQPLRELGFHGVPHKTSAFIIPTSSCLVELIEYPFLVVSLSEIEIVNLERVGFGQK 880
Query: 77 NFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
NFDM +FKD+ + V+ ++++P + L+ +KEWL
Sbjct: 881 NFDMAIIFKDFKKDVLRVDSVPTSSLEGIKEWL 913
>SGD|S000003175 [details] [associations]
symbol:SPT16 "Subunit of the heterodimeric FACT complex
(Spt16p-Pob3p), which assoc" species:4932 "Saccharomyces
cerevisiae" [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IPI]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IDA]
[GO:0060261 "positive regulation of transcription initiation from
RNA polymerase II promoter" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=IDA] [GO:0031298 "replication fork protection complex"
evidence=IDA] [GO:0035101 "FACT complex" evidence=IGI;IPI]
[GO:0008023 "transcription elongation factor complex" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IPI] [GO:0034401 "regulation of transcription by
chromatin organization" evidence=IMP] [GO:0006334 "nucleosome
assembly" evidence=IDA] [GO:0009987 "cellular process"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0034724 "DNA
replication-independent nucleosome organization" evidence=IDA]
InterPro:IPR000994 Pfam:PF00557 SGD:S000003175 EMBL:BK006941
GO:GO:0006281 GO:GO:0006261 GO:GO:0000790 GO:GO:0034401
GO:GO:0006368 GO:GO:0045899 EMBL:M27174 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0006334 GO:GO:0031298 GO:GO:0060261
GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512 GO:GO:0034724
eggNOG:COG5406 HOGENOM:HOG000209079 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 OrthoDB:EOG4QC4DF EMBL:M73533
EMBL:Z72729 PIR:S18512 RefSeq:NP_011308.1 PDB:3BIP PDB:3BIQ
PDB:3BIT PDBsum:3BIP PDBsum:3BIQ PDBsum:3BIT
ProteinModelPortal:P32558 SMR:P32558 DIP:DIP-2546N IntAct:P32558
MINT:MINT-427889 STRING:P32558 PaxDb:P32558 PeptideAtlas:P32558
EnsemblFungi:YGL207W GeneID:852665 KEGG:sce:YGL207W CYGD:YGL207w
OMA:THEAVIS EvolutionaryTrace:P32558 NextBio:971957
Genevestigator:P32558 GermOnline:YGL207W Uniprot:P32558
Length = 1035
Score = 261 (96.9 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 52/104 (50%), Positives = 69/104 (66%)
Query: 7 ASMVEHVTKQEIEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPF-VISLEDVEL 65
A + + + + FR+LGF G P RS V PT+ CLV L E PPF VI+LE+VE+
Sbjct: 812 ADAIAEASNGLLTVENTFRDLGFQGVPNRSAVFCMPTTDCLVQLIE-PPFLVINLEEVEI 870
Query: 66 VHFERVQFQLKNFDMVFVFKDYHRKVVMINAIPMNMLDHVKEWL 109
ERVQF LKNFDMVFV+KD+++ V IN +P+ LD +K+WL
Sbjct: 871 CILERVQFGLKNFDMVFVYKDFNKPVTHINTVPIESLDFLKQWL 914
>TAIR|locus:2139217 [details] [associations]
symbol:GTC2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR013953 Pfam:PF08644 IPI:IPI00536333
RefSeq:NP_192805.2 UniGene:At.54263 EnsemblPlants:AT4G10670.1
GeneID:826660 KEGG:ath:AT4G10670 ArrayExpress:F4JME7 Uniprot:F4JME7
Length = 343
Score = 212 (79.7 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 18 IEFDTPFRELGFPGAPYRSTVLLQPTSGCLVNLTEWPPFVISLEDVELVHFERVQFQLKN 77
+EFD P RE GF G P++++ + PTS CLV LTE P V+ L ++E+V+ ERV F K+
Sbjct: 261 LEFDQPLREFGFNGVPHKTSTFIIPTSSCLVELTESPFLVVCLSEIEIVNLERVGFGQKS 320
Query: 78 FDMVFVFKDYHRKVVMINAIP 98
FDM +FKD + V+ ++++P
Sbjct: 321 FDMAIIFKDLKKDVLRVDSVP 341
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 133 121 0.00091 102 3 11 22 0.44 30
29 0.49 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 593 (63 KB)
Total size of DFA: 136 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 12.41u 0.06s 12.47t Elapsed: 00:00:27
Total cpu time: 12.41u 0.06s 12.47t Elapsed: 00:00:28
Start: Thu Aug 15 14:20:02 2013 End: Thu Aug 15 14:20:30 2013