BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy978
(695 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 168/551 (30%), Positives = 240/551 (43%), Gaps = 98/551 (17%)
Query: 60 DGVKRAITVVNRQLPGPAVDVCVGD----HVIVNLHNGLMEESTSIHWHGHHQVDSPYMD 115
DG R VVN P P + GD +V+ L N M +STSIHWHG Q + + D
Sbjct: 18 DGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWAD 77
Query: 116 GVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAP 174
G + QCP+ +F Y F+ D GT ++HSH +Q DG G F++ P++ HA
Sbjct: 78 GPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYD--PKDPHAS 135
Query: 175 LYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYT 234
YD D ++ +TDW H AD L+NG GR +A+
Sbjct: 136 RYDVDNESTVITLTDWYHTAARLGPRFPLGADA------TLINGLGR------SASTPTA 183
Query: 235 PMEVFTVKQGHSYRFRIINAGYLNCP--IELSIANHTLTAINSDGGDIKPISVGSIVSYA 292
+ V V+ G YRFR+++ ++C SI H LT I DG + +P+ V SI +A
Sbjct: 184 ALAVINVQHGKRYRFRLVS---ISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFA 240
Query: 293 GERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATR 352
+R+ F+LNA VGNYWI+ F +A+LRY+GAP P T
Sbjct: 241 AQRYSFVLNANQTVGNYWIRANPNFGT-VGFAGGINSAILRYQGAPVAEP--------TT 291
Query: 353 TSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHL 412
T T + PL + + + V + + + NL F +F+
Sbjct: 292 TQTTSVIPLIETNLHPLARM-----PVPGSPTPGGVDKALNLAF------------NFNG 334
Query: 413 STLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCEC 472
+ + +N+ SF PT P+L Q L+ + A
Sbjct: 335 TNFF---------------INNASFTPPTVPVLLQI-----------LSGAQTAQDLLPA 368
Query: 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKG 532
+V +P S +E+ + +A A HPFHLHGH F VV + G
Sbjct: 369 GSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVV-----------------RSAG 411
Query: 533 LIRRNLKDAPLKDTVT--VPDGGFTI-IRFHATNPGYWLFHCHIEFHVETGMALVFK--V 587
N D +D V+ P G + IRF NPG W HCHI+FH+E G A+VF V
Sbjct: 412 STTYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAEDV 471
Query: 588 GEHEDMAPVPK 598
+ + PVPK
Sbjct: 472 ADVKAANPVPK 482
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 166/558 (29%), Positives = 244/558 (43%), Gaps = 107/558 (19%)
Query: 57 IPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGL----MEESTSIHWHGHHQVDSP 112
I DG +RA VVN P P + +GD+ +NL N + M ++TSIHWHG Q +
Sbjct: 15 IVPDGFERAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTN 74
Query: 113 YMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFW-HSHTGSQRGDGSFGAFIIRKPRPREV 171
+ DG + QCP+ ++F Y F FW HSH +Q DG G F++ P +
Sbjct: 75 WADGPAFINQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVVYDPN--DP 132
Query: 172 HAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATV 231
HA LYD D ++ + DW HV AD + L+NG GR S +T
Sbjct: 133 HANLYDVDDESTVITLADWYHVAAKLGPRFPKGAD------STLINGLGR-----STSTP 181
Query: 232 TYTPMEVFTVKQGHSYRFRIINAGYLNCP--IELSIANHTLTAINSDGGDIKPISVGSIV 289
T + V +V +G YRFR+++ L+C SI +H LT I +DG +P++V SI
Sbjct: 182 T-ADLAVISVTKGKRYRFRLVS---LSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQ 237
Query: 290 SYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYD 349
+A +R+ F+LNA V NYWI+ F +A+LRY+ A
Sbjct: 238 IFAAQRYSFVLNANQDVDNYWIRANPNFGT-TGFADGVNSAILRYDDA------------ 284
Query: 350 ATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASS----DVRLQDRANLTFYISYDFYEI 405
+P+ + Q +TL+ E + +H +S Q A+L ++++F
Sbjct: 285 ---------DPVEPVTNQTGTTLLLE-TDLHPLTSMPVPGNPTQGGADLNLNMAFNF--- 331
Query: 406 DNPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRC 465
D +F +N SF PT P+L Q ++
Sbjct: 332 DGTNFF--------------------INGESFTPPTVPVLLQI-----------ISGANT 360
Query: 466 ADSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDV 525
A +V ++P S +E+ A A HPFHLHGH F VV
Sbjct: 361 AQDLLPSGSVYSLPSNSSIEITFPATTAAPGAPHPFHLHGHVFAVVR------------- 407
Query: 526 IDMDAKGLIRRNLKDAPLKDTVT--VPDGGFTI-IRFHATNPGYWLFHCHIEFHVETGMA 582
+ G N D +D V+ P G + IRF NPG W HCHI+FH++ G A
Sbjct: 408 ----SAGSTSYNYDDPVWRDVVSTGTPQAGDNVTIRFQTDNPGPWFLHCHIDFHLDAGFA 463
Query: 583 LVFK--VGEHEDMAPVPK 598
+V + + PVP+
Sbjct: 464 VVMAEDIPNTVNANPVPQ 481
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 242/557 (43%), Gaps = 105/557 (18%)
Query: 56 CIPADGVKRAITVVNRQLPGPAVDVCVGD----HVIVNLHNGLMEESTSIHWHGHHQVDS 111
+ DG R +VN P P + GD +VI N+ N M +STSIHWHG Q +
Sbjct: 14 AVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGT 73
Query: 112 PYMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPRE 170
+ DG + QCP+ F Y F D GT ++HSH +Q DG G ++ P+ +
Sbjct: 74 NWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPQ--D 131
Query: 171 VHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNAT 230
H LYD D ++ + DW H L ++ + AD L+NG GR + NA
Sbjct: 132 PHKSLYDVDDDSTVITLADWYH-LAAKVGSPVPTADA------TLINGLGRSID-TLNAD 183
Query: 231 VTYTPMEVFTVKQGHSYRFRIINAGYLNCPIE--LSIANHTLTAINSDGGDIKPISVGSI 288
+ V TV +G YRFR+++ L+C SI H+LT I +D ++KP +V SI
Sbjct: 184 -----LAVITVTKGKRYRFRLVS---LSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSI 235
Query: 289 VSYAGERWDFILNATHHVGNYWIKMRGLMDCDER-FTSAYQTAVLRYEGAPDESPAGEVD 347
+A +R+ F+LNA VGNYWI R L + R F +A+LRY+GA P
Sbjct: 236 QIFAAQRYSFVLNADQDVGNYWI--RALPNSGTRNFDGGVNSAILRYDGAAPVEP----- 288
Query: 348 YDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDN 407
T + NPL A +TL + A V L
Sbjct: 289 ---TTSQTPSTNPL---VESALTTLEGTAAPGSPAPGGVDLA------------------ 324
Query: 408 PHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCAD 467
L+ +GF K +N SF PT P+L Q L+ + A
Sbjct: 325 ----LNMAFGFAGGKF-------TINGASFTPPTVPVLLQI-----------LSGAQSAQ 362
Query: 468 SYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVA----KNITRQ 523
+V ++P + +E+ + A HPFHLHGH F VV + +N +
Sbjct: 363 DLLPSGSVYSLPANADIEISLPATAAAPGFPHPFHLHGHTFAVVRSAGSSTYNYENPVYR 422
Query: 524 DVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMAL 583
DV+ + G D VT IRF NPG W HCHI+FH+E G A+
Sbjct: 423 DVVSTGSPG------------DNVT--------IRFRTDNPGPWFLHCHIDFHLEAGFAV 462
Query: 584 VFK--VGEHEDMAPVPK 598
V + E PVP+
Sbjct: 463 VMAEDIPEVAATNPVPQ 479
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/558 (29%), Positives = 234/558 (41%), Gaps = 102/558 (18%)
Query: 56 CIPADGVKRAITVVNRQLPGPAVDVCVGD----HVIVNLHNGLMEESTSIHWHGHHQVDS 111
+ ADG R VVN PGP + GD +VI NL N M +STS+HWHG Q +
Sbjct: 14 AVAADGHSRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGT 73
Query: 112 PYMDGVPHLTQCPVPPRSTFRYKFNAD-SPGTHFWHSHTGSQRGDGSFGAFIIRKPRPRE 170
+ DG + QCP+ S+F Y F+ GT ++HSH +Q DG G F++ P +
Sbjct: 74 NWADGPAFVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHLSTQYCDGDRGPFVVYD--PND 131
Query: 171 VHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP---TILMNGKGRFKEFRS 227
A LYD D ++ +TDW H +G KP L+NG+GR S
Sbjct: 132 PSANLYDVDNLNTVITLTDWYHTAA---------QNGPAKPGGADATLINGQGRGPSSPS 182
Query: 228 NATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGS 287
+ V +V G YRFR++ + + SI H +T I D +++P+ V
Sbjct: 183 ------ADLAVISVTAGKRYRFRLV-SNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLK 235
Query: 288 IVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVD 347
I YA +R+ FILNA V NYWI+ + FT+ +A+LRY GA P
Sbjct: 236 IQIYAAQRYSFILNANQAVNNYWIRAN-PNQGNVGFTNGINSAILRYSGAAATQPTTSQT 294
Query: 348 YDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDN 407
T L+PL +A + NL +++F +
Sbjct: 295 SSVQPLDQTNLHPLTA-----------------TAVPGSPVAGGVNLAINQAFNFNGTN- 336
Query: 408 PHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCAD 467
HF ++ SF PT P+LSQ ++ + A
Sbjct: 337 -HF---------------------VDGASFVPPTVPVLSQI-----------VSGAQSAA 363
Query: 468 SYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVID 527
V ++P ++ +E+ A HPFHLHGH F VV
Sbjct: 364 DLLASGLVYSLPSDANIEISFPATSAAAGGPHPFHLHGHAFAVV---------------- 407
Query: 528 MDAKGLIRRNLKDAPLKDTVT--VPDGGFTI-IRFHATNPGYWLFHCHIEFHVETGMALV 584
+ G N D +DTV+ P + IRF NPG W HCHI+FH+E G A+V
Sbjct: 408 -RSAGSTTYNYNDPIFRDTVSTGTPAANDNVTIRFKTNNPGPWFLHCHIDFHLEAGFAVV 466
Query: 585 FKVGEHEDMAPVPKDFPT 602
F +D+ V PT
Sbjct: 467 FA----QDIPDVASANPT 480
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 170/553 (30%), Positives = 242/553 (43%), Gaps = 97/553 (17%)
Query: 57 IPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEES----TSIHWHGHHQVDSP 112
I DG R PGP + VGD+ + N L+E S TSIHWHG Q +
Sbjct: 16 IVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTN 75
Query: 113 YMDGVPHLTQCPVPPRSTFRYKFNADS-PGTHFWHSHTGSQRGDGSFGAFIIRKPRPREV 171
+ DG +TQCP+ ++F Y FN GT+++HSH +Q DG G F++ P +
Sbjct: 76 WADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPD- 134
Query: 172 HAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATV 231
A LYD D I+ + DW HVL EM A G + L++G GR ++ V
Sbjct: 135 -ANLYDVDDDTTIITLADWYHVLAKEM-----GAGGAITADSTLIDGLGR-----THVNV 183
Query: 232 TYTPMEVFTVKQGHSYRFRIINAGYLNCP--IELSIANHTLTAINSDGGDIKPISVGSIV 289
P+ V TV+ G YR R+++ ++C + SI H +T I +DG D + ++V I
Sbjct: 184 AAVPLSVITVEVGKRYRMRLVS---ISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQ 240
Query: 290 SYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYD 349
+A +R+ F+LNA VGNYWI+ E F +A+LRY+GA P
Sbjct: 241 IFAAQRYSFVLNANQPVGNYWIRAN-PNSGGEGFDGGINSAILRYDGATTADPVTVASTV 299
Query: 350 ATRT-SGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNP 408
T+ T L+PL SR H +D L NL+ + + I
Sbjct: 300 HTKCLIETDLHPL---SRNGVP------GNPHQGGADCNL----NLSLGFACGNFVI--- 343
Query: 409 HFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADS 468
N +SF PT P+L Q CS T A
Sbjct: 344 ------------------------NGVSFTPPTVPVLLQ--------ICSGANT---AAD 368
Query: 469 YCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDM 528
+V+++P S +E+ + A HPFHLHGH F A+ A N T
Sbjct: 369 LLPSGSVISLPSNSTIEIAL--PAGAAGGPHPFHLHGHDF---AVSESASNST------- 416
Query: 529 DAKGLIRRNLKDAPLKDTVTVPDGGFTI-IRFHATNPGYWLFHCHIEFHVETGMALVFK- 586
N D +D V++ G + IRF NPG W HCHI++H++ G A+VF
Sbjct: 417 -------SNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAE 469
Query: 587 -VGEHEDMAPVPK 598
+ PVP+
Sbjct: 470 DIPNTASANPVPE 482
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 165/557 (29%), Positives = 242/557 (43%), Gaps = 107/557 (19%)
Query: 60 DGVKRAITVVNRQLPGPAVDVCVGDH----VIVNLHNGLMEESTSIHWHGHHQVDSPYMD 115
DG RA V N PGP + GD+ VI NL N M ++T+IHWHG Q + + D
Sbjct: 18 DGFTRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGLFQHGTNWAD 77
Query: 116 GVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAP 174
G + QCP+ ++F Y F D GT ++HSH +Q DG G ++ P + +A
Sbjct: 78 GPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYD--PSDPYAS 135
Query: 175 LYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYT 234
+YD D ++ ++DW H +AD ++L+NG GRF + +
Sbjct: 136 MYDVDDDTTVITLSDWYHTAAKLGPAFPPNAD------SVLINGLGRFAGGNA------S 183
Query: 235 PMEVFTVKQGHSYRFRIINAGYLNCP--IELSIANHTLTAINSDGGDIKPISVGSIVSYA 292
+ V TV+Q YRFR+++ L+C SI H +T I DG + +P+ V SI +A
Sbjct: 184 DLAVITVEQNKRYRFRLVS---LSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFA 240
Query: 293 GERWDFILNATHHVGNYWIKM---RGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYD 349
+R+ F+LNAT V NYWI+ G +D T +A+LRY GA P
Sbjct: 241 SQRYSFVLNATQSVDNYWIRAIPNTGTIDT----TGGLNSAILRYSGADIVDPTANATTS 296
Query: 350 ATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPH 409
T L PL++P+ + + ++ DF
Sbjct: 297 VIPLVETDLVPLDSPAAPGDPVV-------------------GGVDLAMNLDF------S 331
Query: 410 FHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSY 469
F+ + + +N+ + PT P+L Q L+ + A
Sbjct: 332 FNGTNFF---------------INNETLIPPTVPVLLQI-----------LSGAQSASDL 365
Query: 470 CECTNVVNVPLESVVEL---IIIDEGV--AYDANHPFHLHGHPFRVVAMERVAKNITRQD 524
+V +PL S +EL I GV A A HPFHLHGH F VV
Sbjct: 366 LPTGSVYTLPLNSTIELSFPITTVNGVTNAPGAPHPFHLHGHAFSVVR------------ 413
Query: 525 VIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTI-IRFHATNPGYWLFHCHIEFHVETGMAL 583
+ G N + +DTV+ + G + IRF N G W HCHI+FH+E G A+
Sbjct: 414 -----SAGSSDYNYVNPVRRDTVSTGNPGDNVTIRFTTDNAGPWFLHCHIDFHLEAGFAI 468
Query: 584 VFK--VGEHEDMAPVPK 598
VF + + PVP
Sbjct: 469 VFAEDTPDTASVNPVPT 485
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 168/557 (30%), Positives = 237/557 (42%), Gaps = 105/557 (18%)
Query: 56 CIPADGVKRAITVVNRQLPGPAVDVCVGD----HVIVNLHNGLMEESTSIHWHGHHQVDS 111
+ DG R +VN P P + GD +VI N+ N M +STSIHWHG Q +
Sbjct: 14 AVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGT 73
Query: 112 PYMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPRE 170
+ DG + QCP+ F Y F D GT ++HSH +Q DG G ++ P +
Sbjct: 74 NWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYD--PND 131
Query: 171 VHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNAT 230
HA LYD D ++ + DW H L ++ AD L+NG GR +A
Sbjct: 132 PHASLYDVDDDSTVITLADWYH-LAAKVGAPVPTADA------TLINGLGR------SAA 178
Query: 231 VTYTPMEVFTVKQGHSYRFRIINAGYLNCP--IELSIANHTLTAINSDGGDIKPISVGSI 288
+ V TV +G YRFR+++ L+C SI H+LT I +D ++KP +V S+
Sbjct: 179 TLAADLAVITVTKGKRYRFRLVS---LSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSL 235
Query: 289 VSYAGERWDFILNATHHVGNYWIKMRGLMDCD-ERFTSAYQTAVLRYEGAPDESPAGEVD 347
+A +R+ F+LNA V NYWI R L + + F +A+LRY+GA P
Sbjct: 236 QIFAAQRYSFVLNADQDVDNYWI--RALPNSGTQNFAGGTNSAILRYDGAAPVEP----- 288
Query: 348 YDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDN 407
T + NPL +S L + T S D A
Sbjct: 289 ---TTSQTPSTNPL------VESALTTLKGTAAPGSPTPGGVDLA--------------- 324
Query: 408 PHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCAD 467
L+ +GF +N SF PT P+L Q L+ + A
Sbjct: 325 ----LNMAFGFAGGNF-------TINGASFTPPTVPVLLQI-----------LSGAQSAA 362
Query: 468 SYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVA----KNITRQ 523
+V ++P + +E+ + A HPFHLHGH F VV + N +
Sbjct: 363 DLLPAGSVYSLPANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSAGSSTYNYANPVYR 422
Query: 524 DVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMAL 583
DV+ A G D VT IRF NPG W HCHI+FH+E G A+
Sbjct: 423 DVVSTGAPG------------DNVT--------IRFRTDNPGPWFLHCHIDFHLEAGFAV 462
Query: 584 VFK--VGEHEDMAPVPK 598
V + + PVP+
Sbjct: 463 VMAEDIPDVAATNPVPQ 479
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 168/557 (30%), Positives = 237/557 (42%), Gaps = 105/557 (18%)
Query: 56 CIPADGVKRAITVVNRQLPGPAVDVCVGD----HVIVNLHNGLMEESTSIHWHGHHQVDS 111
+ DG R +VN P P + GD +VI N+ N M +STSIHWHG Q +
Sbjct: 14 AVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGT 73
Query: 112 PYMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPRE 170
+ DG + QCP+ F Y F D GT ++HSH +Q DG G ++ P +
Sbjct: 74 NWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYD--PND 131
Query: 171 VHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNAT 230
HA LYD D ++ + DW H L ++ AD L+NG GR +A
Sbjct: 132 PHASLYDVDDDSTVITLADWYH-LAAKVGAPVPTADA------TLINGLGR------SAA 178
Query: 231 VTYTPMEVFTVKQGHSYRFRIINAGYLNCP--IELSIANHTLTAINSDGGDIKPISVGSI 288
+ V TV +G YRFR+++ L+C SI H+LT I +D ++KP +V S+
Sbjct: 179 TLAADLAVITVTKGKRYRFRLVS---LSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSL 235
Query: 289 VSYAGERWDFILNATHHVGNYWIKMRGLMDCD-ERFTSAYQTAVLRYEGAPDESPAGEVD 347
+A +R+ F+LNA V NYWI R L + + F +A+LRY+GA P
Sbjct: 236 QIFAAQRYSFVLNADQDVDNYWI--RALPNSGTQNFAGGTNSAILRYDGAAPVEP----- 288
Query: 348 YDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDN 407
T + NPL +S L + T S D A
Sbjct: 289 ---TTSQTPSTNPL------VESALTTLKGTAAPGSPTPGGVDLA--------------- 324
Query: 408 PHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCAD 467
L+ +GF +N SF PT P+L Q L+ + A
Sbjct: 325 ----LNMAFGFAGGNF-------TINGASFTPPTVPVLLQI-----------LSGAQSAA 362
Query: 468 SYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVA----KNITRQ 523
+V ++P + +E+ + A HPFHLHGH F VV + N +
Sbjct: 363 DLLPAGSVYSLPANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSAGSSTYNYANPVYR 422
Query: 524 DVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMAL 583
DV+ A G D VT IRF NPG W HCHI+FH+E G A+
Sbjct: 423 DVVSTGAPG------------DNVT--------IRFRTDNPGPWFLHCHIDFHLEAGFAV 462
Query: 584 VFK--VGEHEDMAPVPK 598
V + + PVP+
Sbjct: 463 VMAEDIPDVAATNPVPQ 479
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 237/549 (43%), Gaps = 96/549 (17%)
Query: 60 DGVKRAITVVNRQLPGPAVDVCVGD----HVIVNLHNGLMEESTSIHWHGHHQVDSPYMD 115
DG R VVN P P + GD +VI L N M +++SIHWHG Q + + D
Sbjct: 18 DGFAREAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWAD 77
Query: 116 GVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAP 174
G + QCP+ +F Y F D GT ++HSH +Q DG G F++ P + HA
Sbjct: 78 GPAFVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN--DPHAS 135
Query: 175 LYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYT 234
LYD D + ++ + DW HV +D + L+NG GR + +
Sbjct: 136 LYDIDNDDTVITLADWYHVAAKLGPRFPFGSD------STLINGLGR------TTGIAPS 183
Query: 235 PMEVFTVKQGHSYRFRIINAGYLNCPIE--LSIANHTLTAINSDGGDIKPISVGSIVSYA 292
+ V V QG YRFR+++ L+C SI NHT+T I +D + +P+ V SI +A
Sbjct: 184 DLAVIKVTQGKRYRFRLVS---LSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFA 240
Query: 293 GERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATR 352
+R+ F+L+A+ V NYWI+ + F +A+LRY+GAP+ P T
Sbjct: 241 AQRYSFVLDASQPVDNYWIRANPAF-GNTGFAGGINSAILRYDGAPEIEP--------TS 291
Query: 353 TSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHL 412
T PLN +V L + + S + +D P L
Sbjct: 292 VQTTPTKPLN----------------------EVDLHPLSPMPVPGSPEPGGVDKP---L 326
Query: 413 STLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCEC 472
+ ++ F+ +N +F P+ P+L Q L+ + A
Sbjct: 327 NLVFNFNGTNFF-------INDHTFVPPSVPVLLQI-----------LSGAQAAQDLVPE 368
Query: 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKG 532
+V +P S +E+ A HPFHLHGH F VV + G
Sbjct: 369 GSVFVLPSNSSIEISFPATANAPGFPHPFHLHGHAFAVVR-----------------SAG 411
Query: 533 LIRRNLKDAPLKDTVTVPDGGFTI-IRFHATNPGYWLFHCHIEFHVETGMALVFKVGEHE 591
N + +D V+ G + IRF NPG W HCHI+FH++ G A+V +
Sbjct: 412 SSVYNYDNPIFRDVVSTGQPGDNVTIRFETNNPGPWFLHCHIDFHLDAGFAVVMAEDTPD 471
Query: 592 DMA--PVPK 598
A PVP+
Sbjct: 472 TKAANPVPQ 480
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 163/552 (29%), Positives = 238/552 (43%), Gaps = 110/552 (19%)
Query: 57 IPADGVKRAITVVNRQLPGPAVDVCVGDH----VIVNLHNGLMEESTSIHWHGHHQVDSP 112
+ DG RA +VN + GP + D+ V+ +L N M TSIHWHG Q +
Sbjct: 16 VSPDGFTRAGILVN-GVHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTN 74
Query: 113 YMDGVPHLTQCPVPPRSTFRYKFN-ADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREV 171
+ DG + QCP+ P F YKF A GT ++HSH G+Q DG G +I +
Sbjct: 75 WADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYD--DNDP 132
Query: 172 HAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATV 231
HA LYD D I+ + DW H+ + G +P L+NGKGR+ +
Sbjct: 133 HAALYDEDDENTIITLADWYHIPAPSI-------QGAAQPDATLINGKGRYVGGPA---- 181
Query: 232 TYTPMEVFTVKQGHSYRFRIINAGYLNCP--IELSIANHTLTAINSDGGDIKPISVGSIV 289
+ + V+QG YR R+I+ L+C + SI H LT I DG +P +V +
Sbjct: 182 --AELSIVNVEQGKKYRMRLIS---LSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQ 236
Query: 290 SYAGERWDFILNATHHVGNYWIKM---RGLMDCDERFTSAYQTAVLRYEGAPDESPAGEV 346
+ G+R+ F+L+A V NYWI+ +G F + +A+LRY GA + P
Sbjct: 237 IFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSA 296
Query: 347 DYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEID 406
+ + + + L+ L P+ T ++DV NL F + +
Sbjct: 297 NPNPAQLNEADLHALIDPAAPGIPT---------PGAADV------NLRFQLGFSGGRF- 340
Query: 407 NPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCA 466
+N ++ P+ P L Q ++ + A
Sbjct: 341 ------------------------TINGTAYESPSVPTLLQI-----------MSGAQSA 365
Query: 467 DSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAK----NITR 522
+ +V +P VVEL ++ GV HPFHLHGH F VV + N +
Sbjct: 366 NDLLPAGSVYELPRNQVVEL-VVPAGV-LGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVK 423
Query: 523 QDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMA 582
+DV+ + G D VT IRF NPG W FHCHIEFH+ G+A
Sbjct: 424 RDVVSLGVTG------------DEVT--------IRFVTDNPGPWFFHCHIEFHLMNGLA 463
Query: 583 LVFKVGEHEDMA 594
+VF EDMA
Sbjct: 464 IVFA----EDMA 471
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 163/552 (29%), Positives = 238/552 (43%), Gaps = 110/552 (19%)
Query: 57 IPADGVKRAITVVNRQLPGPAVDVCVGDH----VIVNLHNGLMEESTSIHWHGHHQVDSP 112
+ DG RA +VN + GP + D+ V+ +L N M TSIHWHG Q +
Sbjct: 16 VSPDGFTRAGILVN-GVHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTN 74
Query: 113 YMDGVPHLTQCPVPPRSTFRYKFN-ADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREV 171
+ DG + QCP+ P F YKF A GT ++HSH G+Q DG G +I +
Sbjct: 75 WADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYD--DNDP 132
Query: 172 HAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATV 231
HA LYD D I+ + DW H+ + G +P L+NGKGR+ +
Sbjct: 133 HAALYDEDDENTIITLADWYHIPAPSI-------QGAAQPDATLINGKGRYVGGPA---- 181
Query: 232 TYTPMEVFTVKQGHSYRFRIINAGYLNCP--IELSIANHTLTAINSDGGDIKPISVGSIV 289
+ + V+QG YR R+I+ L+C + SI H LT I DG +P +V +
Sbjct: 182 --AELSIVNVEQGKKYRMRLIS---LSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQ 236
Query: 290 SYAGERWDFILNATHHVGNYWIKM---RGLMDCDERFTSAYQTAVLRYEGAPDESPAGEV 346
+ G+R+ F+L+A V NYWI+ +G F + +A+LRY GA + P
Sbjct: 237 IFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSA 296
Query: 347 DYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEID 406
+ + + + L+ L P+ T ++DV NL F + +
Sbjct: 297 NPNPAQLNEADLHALIDPAAPGIPT---------PGAADV------NLRFQLGFSGGRF- 340
Query: 407 NPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCA 466
+N ++ P+ P L Q ++ + A
Sbjct: 341 ------------------------TINGTAYESPSVPTLLQI-----------MSGAQSA 365
Query: 467 DSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAK----NITR 522
+ +V +P VVEL ++ GV HPFHLHGH F VV + N +
Sbjct: 366 NDLLPAGSVYELPRNQVVEL-VVPAGV-LGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVK 423
Query: 523 QDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMA 582
+DV+ + G D VT IRF NPG W FHCHIEFH+ G+A
Sbjct: 424 RDVVSLGVTG------------DEVT--------IRFVTDNPGPWFFHCHIEFHLMNGLA 463
Query: 583 LVFKVGEHEDMA 594
+VF EDMA
Sbjct: 464 IVFA----EDMA 471
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 239/552 (43%), Gaps = 100/552 (18%)
Query: 60 DGVKRAITVVNRQLPGPAVDVCVGD----HVIVNLHNGLMEESTSIHWHGHHQVDSPYMD 115
DG R VVN PGP V +GD +VI NL N M ++TS+HWHG Q + + D
Sbjct: 18 DGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWAD 77
Query: 116 GVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAP 174
G + QCP+ P +F Y F + GT ++HSH +Q DG G F++ P + HA
Sbjct: 78 GPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPN--DPHAS 135
Query: 175 LYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYT 234
YD D + ++ + DW H A D L+NGKGR + T
Sbjct: 136 RYDVDNDDTVITLADWYHT--AAKLGPRFPAGAD----ATLINGKGRAP------SDTSA 183
Query: 235 PMEVFTVKQGHSYRFRIINAGYLNCP--IELSIANHTLTAINSDGGDIKPISVGSIVSYA 292
+ V V +G RFR+++ L+C SI H LT I D + +P+SV SI +A
Sbjct: 184 ELSVIKVTKGKRXRFRLVS---LSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFA 240
Query: 293 GERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATR 352
+R+ F+LNA V NYWI+ + F +A+LRY+GAP P T
Sbjct: 241 AQRYSFVLNANQAVDNYWIRANPNFG-NVGFNGGINSAILRYDGAPAVEP--------TT 291
Query: 353 TSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRA-NLTFYISYDFYEIDNPHFH 411
T + PLN + L +ST S D+A N+ F +F+
Sbjct: 292 NQTTSVKPLN------EVNLHPLVSTPVPGSPSSGGVDKAINMAF------------NFN 333
Query: 412 LSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCE 471
S + +N SF P+ P+L Q L+ + A
Sbjct: 334 GSNFF---------------INGASFVPPSVPVLLQI-----------LSGAQTAQDLLP 367
Query: 472 CTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAK 531
+V +P + +E+ A A HPFHLHGH F VV +
Sbjct: 368 SGSVXVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVV-----------------RSA 410
Query: 532 GLIRRNLKDAPLKDTVT--VPDGGFTI-IRFHATNPGYWLFHCHIEFHVETGMALVFK-- 586
G N + +D V+ P G + IRF NPG W HCHI+FH+E G A+V
Sbjct: 411 GSTVYNYSNPIFRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAVVQAED 470
Query: 587 VGEHEDMAPVPK 598
V + + PVP+
Sbjct: 471 VPDVKATNPVPQ 482
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 239/555 (43%), Gaps = 98/555 (17%)
Query: 56 CIPADGVKRAITVVNRQLPGPAVDVCVGD----HVIVNLHNGLMEESTSIHWHGHHQVDS 111
+ DG R VVN PGP V +GD +VI NL N M +STSIHWHG Q +
Sbjct: 14 AVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGT 73
Query: 112 PYMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPRE 170
+ DG + QCP+ P +F Y F D GT ++HSH +Q DG G F++ P +
Sbjct: 74 NWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN--D 131
Query: 171 VHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNAT 230
HA YD D + ++ + DW H AD L+NGKGR +
Sbjct: 132 PHASRYDVDNDDTVITLADWYHTAAKLGPRFPGGADA------TLINGKGRAP------S 179
Query: 231 VTYTPMEVFTVKQGHSYRFRIINAGYLNCPIE--LSIANHTLTAINSDGGDIKPISVGSI 288
+ + V V +G YRFR+++ L+C SI H LT I D + +P+ V SI
Sbjct: 180 DSVAELSVIKVTKGKRYRFRLVS---LSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSI 236
Query: 289 VSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDY 348
+A +R+ F+L+A V NYWI+ + F +A+LRY+GAP P
Sbjct: 237 QIFAAQRYSFVLDANQAVDNYWIRANPNFG-NVGFDGGINSAILRYDGAPAVEP------ 289
Query: 349 DATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNP 408
T T + PLN L+S + V A S + N+ F
Sbjct: 290 --TTNQTTSVKPLNEVDLHP---LVS--TPVPGAPSSGGVDKAINMAF------------ 330
Query: 409 HFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADS 468
+F+ S + +N SF PT P+L Q L+ + A
Sbjct: 331 NFNGSNFF---------------INGASFVPPTVPVLLQI-----------LSGAQTAQD 364
Query: 469 YCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDM 528
+V +P + +E+ A A HPFHLHGH F VV
Sbjct: 365 LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVR---------------- 408
Query: 529 DAKGLIRRNLKDAPLKDTVT--VPDGGFTI-IRFHATNPGYWLFHCHIEFHVETGMALVF 585
+ G N + +D V+ P G + IRF NPG W HCHI+FH+E G A+V
Sbjct: 409 -SAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVM 467
Query: 586 K--VGEHEDMAPVPK 598
+ + + PVP+
Sbjct: 468 AEDTPDVKAVNPVPQ 482
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 222/523 (42%), Gaps = 105/523 (20%)
Query: 85 HVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTH 143
+VI L + M +TSIHWHG Q + MDG + QCP+ P +F Y F GT+
Sbjct: 68 NVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTY 127
Query: 144 FWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHH 203
++HSH +Q DG GAF++ P + H LYD D ++ I DW H L +F +
Sbjct: 128 WYHSHLSTQYCDGLRGAFVVYD--PNDPHLSLYDVDDASTVITIADWYHSLSTVLFPNPN 185
Query: 204 HADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIEL 263
A T L+NG G R++A + + V +V+ G YRFRI++
Sbjct: 186 KAPPAPD--TTLINGLG-----RNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPN-YAF 237
Query: 264 SIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERF 323
SI H +T I DG +P++V S+ +AG+R+ ++ A VGNYWI+ + F
Sbjct: 238 SIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANP-SNGRNGF 296
Query: 324 TSAYQTAVLRYEGAPDESPAGEVDYDATRTSGTVLN-----PLNTPSRQAKSTLISELST 378
T +A+ RY+GA P ++ SGT LN PL P
Sbjct: 297 TGGINSAIFRYQGAAVAEPT------TSQNSGTALNEANLIPLINPGAPGNPV------- 343
Query: 379 VHSASSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFR 438
+D+ L R + R +N F
Sbjct: 344 --PGGADINLNLR-----------------------------IGRNATTADFTINGAPFI 372
Query: 439 FPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVAYDAN 498
PT P+L Q S +T + V+++P V+E+ I G N
Sbjct: 373 PPTVPVLLQ--------ILSGVTN---PNDLLPGGAVISLPANQVIEISIPGGG-----N 416
Query: 499 HPFHLHGHPFRVVAMERVA----KNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGF 554
HPFHLHGH F VV + N R+DV+ + G D VT
Sbjct: 417 HPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGG------------DNVT------ 458
Query: 555 TIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEHEDMAPVP 597
RF NPG W HCHI++H+E G+A+VF ED+ +P
Sbjct: 459 --FRFVTDNPGPWFLHCHIDWHLEAGLAVVFA----EDIPNIP 495
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 170/556 (30%), Positives = 240/556 (43%), Gaps = 100/556 (17%)
Query: 56 CIPADGVKRAITVVNRQLPGPAVDVCVGD----HVIVNLHNGLMEESTSIHWHGHHQVDS 111
+ DG R VVN PGP V +GD +VI NL N M +STSIHWHG Q +
Sbjct: 14 AVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGT 73
Query: 112 PYMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPRE 170
+ DG + QCP+ P +F Y F D GT ++HSH +Q DG G F++ P +
Sbjct: 74 NWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN--D 131
Query: 171 VHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNAT 230
HA YD D + ++ + DW H AD L+NGKGR +
Sbjct: 132 PHASRYDVDNDDTVITLADWYHTAAKLGPRFPGGADA------TLINGKGRAP------S 179
Query: 231 VTYTPMEVFTVKQGHSYRFRIINAGYLNCPIE--LSIANHTLTAINSDGGDIKPISVGSI 288
+ + V V +G YRFR+++ L+C SI H LT I D + +P+ V SI
Sbjct: 180 DSVAELSVIKVTKGKRYRFRLVS---LSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSI 236
Query: 289 VSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDY 348
+A +R+ F+L+A V NYWI+ + F +A+LRY+GAP P
Sbjct: 237 QIFAAQRYSFVLDANQAVDNYWIRANPNFG-NVGFDGGINSAILRYDGAPAVEP------ 289
Query: 349 DATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRA-NLTFYISYDFYEIDN 407
T T + PLN + L +ST S D+A N+ F
Sbjct: 290 --TTNQTTSVKPLN------EVDLHPLVSTPVPGSPSSGGVDKAINMAF----------- 330
Query: 408 PHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCAD 467
+F+ S + +N SF PT P+L Q L+ + A
Sbjct: 331 -NFNGSNFF---------------INGASFVPPTVPVLLQI-----------LSGAQTAQ 363
Query: 468 SYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVID 527
+V +P + +E+ A A HPFHLHGH F VV
Sbjct: 364 DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVR--------------- 408
Query: 528 MDAKGLIRRNLKDAPLKDTVT--VPDGGFTI-IRFHATNPGYWLFHCHIEFHVETGMALV 584
+ G N + +D V+ P G + IRF NPG W HCHI+FH+E G A+V
Sbjct: 409 --SAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVV 466
Query: 585 FK--VGEHEDMAPVPK 598
+ + + PVP+
Sbjct: 467 MAEDTPDVKAVNPVPQ 482
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 162/555 (29%), Positives = 237/555 (42%), Gaps = 98/555 (17%)
Query: 56 CIPADGVKRAITVVNRQLPGPAVDVCVGD----HVIVNLHNGLMEESTSIHWHGHHQVDS 111
+ DG R VVN PGP + +GD +VI NL N M +STSIHWHG Q +
Sbjct: 14 AVSPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGT 73
Query: 112 PYMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPRE 170
+ DG + QCP+ +F Y F D GT ++HSH +Q DG G F++ P +
Sbjct: 74 NWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYD--PND 131
Query: 171 VHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNAT 230
A LYD D + ++ + DW HV AD L+NGKGR + +
Sbjct: 132 PAADLYDVDNDDTVITLVDWYHVAAKLGPAFPLGADA------TLINGKGR------SPS 179
Query: 231 VTYTPMEVFTVKQGHSYRFRIINAGYLNCP--IELSIANHTLTAINSDGGDIKPISVGSI 288
T + V +V G YRFR+++ L+C SI H +T I +D + P+ V SI
Sbjct: 180 TTTADLSVISVTPGKRYRFRLVS---LSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSI 236
Query: 289 VSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDY 348
+A +R+ F+L A V NYWI+ + FT +A+LRY+GA P
Sbjct: 237 QIFAAQRYSFVLEANQAVDNYWIRANPNFG-NVGFTGGINSAILRYDGAAAVEPTTTQTT 295
Query: 349 DATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNP 408
+ L+PL V +A + +L ++++F +
Sbjct: 296 STAPLNEVNLHPL-----------------VATAVPGSPVAGGVDLAINMAFNF---NGT 335
Query: 409 HFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADS 468
+F +N SF PT P+L Q ++ + A
Sbjct: 336 NFF--------------------INGASFTPPTVPVLLQI-----------ISGAQNAQD 364
Query: 469 YCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDM 528
+V ++P + +E+ A A HPFHLHGH F VV
Sbjct: 365 LLPSGSVYSLPSNADIEISFPATAAAPGAPHPFHLHGHAFAVVR---------------- 408
Query: 529 DAKGLIRRNLKDAPLKDTVT--VPDGGFTI-IRFHATNPGYWLFHCHIEFHVETGMALVF 585
+ G N + +D V+ P G + IRF NPG W HCHI+FH+E G A+VF
Sbjct: 409 -SAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVF 467
Query: 586 K--VGEHEDMAPVPK 598
+ + PVP+
Sbjct: 468 AEDIPDVASANPVPQ 482
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 240/555 (43%), Gaps = 106/555 (19%)
Query: 60 DGVKRAITVVNRQLPGPAVDVCVGD----HVIVNLHNGLMEESTSIHWHGHHQVDSPYMD 115
DG R VVN PGP V +GD +VI NL N M ++TS+HWHG Q + + D
Sbjct: 18 DGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWAD 77
Query: 116 GVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAP 174
G + QCP+ P +F Y F + GT ++HSH +Q DG G F++ P + HA
Sbjct: 78 GPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYD--PNDPHAS 135
Query: 175 LYDFDLPEHIMLITDWSHV---LGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATV 231
YD D + + + DW H LG N AD + L+NGKGR S
Sbjct: 136 RYDVDNDDTTITLADWYHTAAKLGPAFPNG---AD------STLINGKGRAPSDSS---- 182
Query: 232 TYTPMEVFTVKQGHSYRFRIINAGYLNCP--IELSIANHTLTAINSDGGDIKPISVGSIV 289
+ V +V +G RFR+++ L+C SI H T I +D + +P++ SI
Sbjct: 183 --AQLSVVSVTKGKRXRFRLVS---LSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQ 237
Query: 290 SYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYD 349
+A +R+ F LNA V NYWI+ + F +A+LRY+GAP P
Sbjct: 238 IFAAQRYSFTLNANQAVDNYWIRANPNFG-NVGFNGGINSAILRYDGAPAVEP------- 289
Query: 350 ATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRA-NLTFYISYDFYEIDNP 408
T T PLN ++ L +ST S D+A N+ F
Sbjct: 290 -TTNQSTSTQPLN------ETNLHPLVSTPVPGSPAAGGVDKAINMAF------------ 330
Query: 409 HFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADS 468
+F+ S + +N SF P+ P+L Q L+ + A
Sbjct: 331 NFNGSNFF---------------INGASFTPPSVPVLLQI-----------LSGAQTAQD 364
Query: 469 YCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDM 528
+V +P + +E+ A A HPFHLHGH F VV
Sbjct: 365 LLPSGSVXTLPSNASIEISFPATAAAPGAPHPFHLHGHVFAVVR---------------- 408
Query: 529 DAKGLIRRNLKDAPLKDTVT--VPDGGFTI-IRFHATNPGYWLFHCHIEFHVETGMALVF 585
+ G N + +D V+ P G + IRF NPG W HCHI+FH+E G A+V
Sbjct: 409 -SAGSTVYNYSNPIFRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAVVQ 467
Query: 586 K--VGEHEDMAPVPK 598
V + + PVP+
Sbjct: 468 AEDVPDVKATNPVPQ 482
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 156/566 (27%), Positives = 240/566 (42%), Gaps = 83/566 (14%)
Query: 69 VNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPR 128
+N Q PGP + GD V+V L N L E IHWHG Q +P+ DG ++QC + P
Sbjct: 27 INGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPG 86
Query: 129 STFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPL-YDFDLPEHIMLI 187
TF Y F D+PGT F+H H G QR G +G+ I+ P+ ++ P YD ++ +L+
Sbjct: 87 ETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKK--EPFHYDGEI---NLLL 141
Query: 188 TDWSH--VLGVEMFNAHHHADGDNKPPTILMNGKGRF-----KEFRSN-------ATVTY 233
+DW H + E+ + +P TIL+NG+G+F ++ SN + +
Sbjct: 142 SDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESC 201
Query: 234 TPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAG 293
P +F V +YR RI + L + +I NH L + +DG ++P I Y+G
Sbjct: 202 APY-IFHVSPKKTYRIRIASTTALAA-LNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSG 259
Query: 294 ERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATRT 353
E + L+ D+ + Y +V P+ P
Sbjct: 260 ESYSV-----------------LITTDQNPSENYWVSVGTRARHPNTPPGL--------- 293
Query: 354 SGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRA-NLTFYISYDFYEIDNPHFHL 412
T+LN L + S L + A D DR+ N T+ I+ P
Sbjct: 294 --TLLNYL----PNSVSKLPTSPPPQTPAWDDF---DRSKNFTYRITAAMGSPKPPVKFN 344
Query: 413 STLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSY--- 469
++ + + +N +S P P L F N + + Y
Sbjct: 345 RRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDID 404
Query: 470 ----CECTNVVN----VPLESVVELIIIDEGVAYD---ANHPFHLHGHPFRVVAMERVAK 518
E T + N + VV++I+ + + + HP+HLHGH F V+
Sbjct: 405 TPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKF 464
Query: 519 NITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVE 578
+ + + NLK+ PL++TV + G+T IRF A NPG W FHCHIE H+
Sbjct: 465 SAEEESSL----------NLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLH 514
Query: 579 TGMALVFKVGEHEDMAPVPKDFPTCG 604
GM +VF G E + +P CG
Sbjct: 515 MGMGVVFAEGV-EKVGRIPTKALACG 539
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 155/596 (26%), Positives = 245/596 (41%), Gaps = 83/596 (13%)
Query: 4 MYHYKDKHSCQRECIEGDTRTC---TYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPAD 60
M + C R C +D + ++ + + +T + + I D
Sbjct: 32 MLQVLEARQSGPTCNTPSNRACWTNGFDINTDYEVSTPNTGRTVAYQLTLTEKENWIGPD 91
Query: 61 GV-KRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPH 119
GV K + +VN ++ GP + GD++ V + N L TS+HWHG Q+ + + DG
Sbjct: 92 GVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANG 151
Query: 120 LTQCPVPPRSTFR-YKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDF 178
+T+CP+PP+ + YKF A GT ++HSH +Q G+G G I P YD
Sbjct: 152 VTECPIPPKGGRKTYKFRATQYGTSWYHSHFSAQYGNGVVGTIQIDGPASLP-----YDI 206
Query: 179 DLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPT--ILMNGKGRFKEFRSNA--TVTYT 234
DL + + D+ + E+ H + PP+ +L NG R E + VT T
Sbjct: 207 DL--GVFPLMDYYYRSADELV---HFTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTLT 261
Query: 235 PMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGE 294
P G +R RIIN N ++S+ H +T I +D + +V S+ G+
Sbjct: 262 P--------GKRHRLRIINTSTDNH-FQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQ 312
Query: 295 RWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATRTS 354
R+D ++A VGNYW + + + A+ RY+GAP P D +
Sbjct: 313 RYDVTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAPATLPT---DQGLPVPN 369
Query: 355 GTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHLST 414
L+ LN +S ++ S + V L F + I+
Sbjct: 370 HMCLDNLNLTPVVTRSAPVNNFVKRPSNTLGVTLDIGGTPLFVWKVNGSAIN-------- 421
Query: 415 LYGFDEVKRLEKVRTPQLNHLSFRFPTFPL---LSQRDQIDESTFCSNLTTDRCADSYCE 471
D K P L+++ ++P+ + Q D +D+ T+
Sbjct: 422 ---VDWGK-------PILDYVMSGNTSYPVSDNIVQVDAVDQWTYWL------------- 458
Query: 472 CTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDV--IDMD 529
+ N P +V L HP HLHGH F V+ R + V I
Sbjct: 459 ---IENDPTNPIVSL-----------PHPMHLHGHDFLVLG--RSPDELPSAGVRHIFDP 502
Query: 530 AKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVF 585
AK L R + +D +P GG+ ++ F NPG WLFHCHI +HV G+++ F
Sbjct: 503 AKDLPRLKGNNPVRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDF 558
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 142/291 (48%), Gaps = 17/291 (5%)
Query: 57 IPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDG 116
I DG R+ N +PGPA+ GD++I+++ N L TSIHWHG Q+ S DG
Sbjct: 79 ITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDG 138
Query: 117 VPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLY 176
VP +TQCP+ P T YKF GT ++HSH Q GDG FG II P
Sbjct: 139 VPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPATA------- 191
Query: 177 DFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTI---LMNGKGRFKEFRSNATVTY 233
D+D ++ + DW+H E+++ PP + LMNG F S
Sbjct: 192 DYDEDVGVIFLQDWAHESVFEIWDTARLG----APPALENTLMNGTNTFDCSASTDPNCV 247
Query: 234 TPMEVF--TVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSY 291
+ F T +G YR R+IN G ++ E +I NHTLT I +D I P + +++
Sbjct: 248 GGGKKFELTFVEGTKYRLRLINVG-IDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIG 306
Query: 292 AGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESP 342
G+R+D I+ A NYWI+ C +A T +LRY+ + +P
Sbjct: 307 IGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANP 357
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 488 IIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTV 547
+I++ + HP HLHGH F +VA E DV + D + + NL + P +D
Sbjct: 452 VIEDLTGFGIWHPIHLHGHDFFIVAQET--------DVFNSD-ESPAKFNLVNPPRRDVA 502
Query: 548 TVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVF 585
+P G+ I F NPG WL HCHI +H G+A+ F
Sbjct: 503 ALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQF 540
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 142/291 (48%), Gaps = 17/291 (5%)
Query: 57 IPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDG 116
I DG R+ N +PGPA+ GD++I+++ N L TSIHWHG Q+ S DG
Sbjct: 79 ITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDG 138
Query: 117 VPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLY 176
VP +TQCP+ P T YKF GT ++HSH Q GDG FG II P
Sbjct: 139 VPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPATA------- 191
Query: 177 DFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTI---LMNGKGRFKEFRSNATVTY 233
D+D ++ + DW+H E+++ PP + LMNG F S
Sbjct: 192 DYDEDVGVIFLQDWAHESVFEIWDTARLG----APPALENTLMNGTNTFDCSASTDPNCV 247
Query: 234 TPMEVF--TVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSY 291
+ F T +G YR R+IN G ++ E +I NHTLT I +D I P + +++
Sbjct: 248 GGGKKFELTFVEGTKYRLRLINVG-IDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIG 306
Query: 292 AGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESP 342
G+R+D I+ A NYWI+ C +A T +LRY+ + +P
Sbjct: 307 IGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANP 357
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 488 IIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTV 547
+I++ + HP HLHGH F +VA E DV + D + + NL + P +D
Sbjct: 452 VIEDLTGFGIWHPIHLHGHDFFIVAQET--------DVFNSD-ESPAKFNLVNPPRRDVA 502
Query: 548 TVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVF 585
+P G+ I F NPG WL HCHI +H GMA+ F
Sbjct: 503 ALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGMAMQF 540
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 216/526 (41%), Gaps = 81/526 (15%)
Query: 59 ADGVK-RAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGV 117
DG+K R + N Q P P + V GD V + L NG+ +TS+H+HG Q + MDGV
Sbjct: 16 VDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGV 75
Query: 118 PHLTQCPVPPRSTFRYKFNAD-SPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLY 176
P LTQCP+ P ST Y F D + GT+++HSHT Q DG G FII+ + Y
Sbjct: 76 PFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKD------DSFPY 129
Query: 177 DFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPM 236
D+D E + +++W H L ++ K + N G + N V T
Sbjct: 130 DYD-EELSLSLSEWYHDLVTDL----------TKSFMSVYNPTGA-EPIPQNLIVNNTMN 177
Query: 237 EVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERW 296
+ V+ +Y RI+N G I +H +T + DG + + +R+
Sbjct: 178 LTWEVQPDTTYLLRIVNVGGF-VSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRY 236
Query: 297 DFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATRTSGT 356
++ H N D D+ F + + P D TS
Sbjct: 237 TVLV----HTKN---------DTDKNFAIMQKFDDTMLDVIPS-------DLQLNATSYM 276
Query: 357 VLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLY 416
V N + A + + ++ + D LQ Y P ++
Sbjct: 277 VYN------KTAALPTQNYVDSIDNFLDDFYLQPYEKEAIY--------GEPDHVITVDV 322
Query: 417 GFDEVKRLEKVRTPQLNHLSFRFPTFP----LLSQRDQIDESTFCSNLTTDRCADSYCEC 472
D +K V N++++ P P +LS DQ + S + Y
Sbjct: 323 VMDNLKN--GVNYAFFNNITYTAPKVPTLMTVLSSGDQANNS------------EIYGSN 368
Query: 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKG 532
T+ + + +VE+++ ++ HPFHLHGH F+ + +R + + D
Sbjct: 369 THTFILEKDEIVEIVLNNQDT---GTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDN 425
Query: 533 LIRRNLKDAPL-KDTVTV-PDGGFTIIRFHATNPGYWLFHCHIEFH 576
+ P+ +DT+ V P F +IRF A NPG W FHCHIE+H
Sbjct: 426 --HPAFPEYPMRRDTLYVRPQSNF-VIRFKADNPGVWFFHCHIEWH 468
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 145/308 (47%), Gaps = 30/308 (9%)
Query: 46 FNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHG 105
FN+T+ P VK + ++N + GP + GD V V + N L+ TSIHWHG
Sbjct: 38 FNLTEVDNWMG-PDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHG 96
Query: 106 HHQVDSPYMDGVPHLTQCPVPPRSTFR-YKFNADSPGTHFWHSHTGSQRGDGSFGAFIIR 164
HQ D+ DG +T+CP+PP+ R Y++ A GT ++HSH +Q G+G G I
Sbjct: 97 IHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQIN 156
Query: 165 KPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP---TILMNGKGR 221
P YD DL + ITD+ + ++ H +N PP +L+NG
Sbjct: 157 GPASLP-----YDIDL--GVFPITDYYYRAADDLV----HFTQNNAPPFSDNVLINGTAV 205
Query: 222 FKEFRSN--ATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGD 279
A VT TP G +R RI+N N ++S+ NHT+T I +D
Sbjct: 206 NPNTGEGQYANVTLTP--------GKRHRLRILNTSTENH-FQVSLVNHTMTVIAADMVP 256
Query: 280 IKPISVGSIVSYAGERWDFILNATHHVGNYW--IKMRGLMDCDERFTSAYQTAVLRYEGA 337
+ ++V S+ G+R+D +++A+ NYW + G C + + A+ Y GA
Sbjct: 257 VNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSL-NPHPAAIFHYAGA 315
Query: 338 PDESPAGE 345
P P E
Sbjct: 316 PGGLPTDE 323
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 468 SYCECTNVVNVPL--ESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDV 525
SY N+V V + LI D + HP HLHGH F V+ ++Q
Sbjct: 398 SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRF 457
Query: 526 IDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVF 585
+ A L R N + P +DT +P GG+ ++ F NPG WLFHCHI +HV G+++ F
Sbjct: 458 VFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDF 517
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 145/308 (47%), Gaps = 30/308 (9%)
Query: 46 FNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHG 105
FN+T+ P VK + ++N + GP + GD V V + N L+ TSIHWHG
Sbjct: 38 FNLTEVDNWMG-PDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHG 96
Query: 106 HHQVDSPYMDGVPHLTQCPVPPRSTFR-YKFNADSPGTHFWHSHTGSQRGDGSFGAFIIR 164
HQ D+ DG +T+CP+PP+ R Y++ A GT ++HSH +Q G+G G I
Sbjct: 97 IHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQIN 156
Query: 165 KPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP---TILMNGKGR 221
P YD DL + ITD+ + ++ H +N PP +L+NG
Sbjct: 157 GPASLP-----YDIDL--GVFPITDYYYRAADDLV----HFTQNNAPPFSDNVLINGTAV 205
Query: 222 FKEFRSN--ATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGD 279
A VT TP G +R RI+N N ++S+ NHT+T I +D
Sbjct: 206 NPNTGEGQYANVTLTP--------GKRHRLRILNTSTENH-FQVSLVNHTMTVIAADMVP 256
Query: 280 IKPISVGSIVSYAGERWDFILNATHHVGNYW--IKMRGLMDCDERFTSAYQTAVLRYEGA 337
+ ++V S+ G+R+D +++A+ NYW + G C + + A+ Y GA
Sbjct: 257 VNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSL-NPHPAAIFHYAGA 315
Query: 338 PDESPAGE 345
P P E
Sbjct: 316 PGGLPTDE 323
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 468 SYCECTNVVNVPL--ESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDV 525
SY N+V V + LI D + HP HLHGH F V+ ++Q
Sbjct: 398 SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRF 457
Query: 526 IDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVF 585
+ A L R N + P +DT +P GG+ ++ F NPG WLFHCHI +HV G+++ F
Sbjct: 458 VFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDF 517
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 144/308 (46%), Gaps = 30/308 (9%)
Query: 46 FNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHG 105
FN+T+ P VK + ++N + GP + GD V V + N L+ TSIHWHG
Sbjct: 38 FNLTEVDNWMG-PDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHG 96
Query: 106 HHQVDSPYMDGVPHLTQCPVPPRSTFR-YKFNADSPGTHFWHSHTGSQRGDGSFGAFIIR 164
Q D+ DG +T+CP+PP+ R Y++ A GT ++HSH +Q G+G G I
Sbjct: 97 IXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQIN 156
Query: 165 KPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP---TILMNGKGR 221
P YD DL + ITD+ + ++ H +N PP +L+NG
Sbjct: 157 GPASLP-----YDIDL--GVFPITDYYYRAADDLV----HFTQNNAPPFSDNVLINGTAV 205
Query: 222 FKEFRSN--ATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGD 279
A VT TP G +R RI+N N ++S+ NHT+T I +D
Sbjct: 206 NPNTGEGQYANVTLTP--------GKRHRLRILNTSTENH-FQVSLVNHTMTVIAADMVP 256
Query: 280 IKPISVGSIVSYAGERWDFILNATHHVGNYW--IKMRGLMDCDERFTSAYQTAVLRYEGA 337
+ ++V S+ G+R+D +++A+ NYW + G C + + A+ Y GA
Sbjct: 257 VNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSL-NPHPAAIFHYAGA 315
Query: 338 PDESPAGE 345
P P E
Sbjct: 316 PGGLPTDE 323
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 468 SYCECTNVVNVPL--ESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDV 525
SY N+V V + LI D + HP HLHGH F V+ ++Q
Sbjct: 398 SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRF 457
Query: 526 IDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVF 585
+ A L R N + P +DT +P GG+ ++ F NPG WLFHCHI +HV G+++ F
Sbjct: 458 VFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDF 517
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 105/236 (44%), Gaps = 26/236 (11%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRS 129
N Q+P P + V GD V VN+ N + +IHWHG Q + DGVPH TQ + P
Sbjct: 28 NGQVPAPLIHVMEGDDVTVNVTN-MTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGD 86
Query: 130 TFRYKFNADSPGTHFWHSHTGSQR---GDGSFGAFIIRKPRPREVHAPLYDFDLPEHIML 186
TF YKF A+ GT ++H H G +G I+ P P+ ++I++
Sbjct: 87 TFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNP----LPIEKTVTKDYILM 142
Query: 187 ITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHS 246
++DW + NKP + G F + NA ++ + VK+G
Sbjct: 143 LSDWV-------------SSWANKPGEGGIPGD-VFDYYTINAK-SFPETQPIRVKKGDV 187
Query: 247 YRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KPISVGSIVSYAGERWDFILN 301
R R+I AG + + H DG + KPI +++ GER+D ILN
Sbjct: 188 IRLRLIGAG--DHVHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILN 241
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 26/116 (22%)
Query: 466 ADSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDV 525
A S+ E T + V V+ L +I G D H H HGH I +D
Sbjct: 171 AKSFPE-TQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGH----------ISQIAFKDG 216
Query: 526 IDMDAKGLIRRNLKDAPLK-DTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETG 580
+D P+K DTV + G + + NPG W+ H H++ H G
Sbjct: 217 FPLDK-----------PIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNG 261
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 51/256 (19%)
Query: 61 GVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHG---HHQVDSPYMDGV 117
G + + PGP + V D V + L N L E T++HWHG +VD P+++
Sbjct: 32 GQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRL-PEPTNLHWHGLPISPKVDDPFLE-- 88
Query: 118 PHLTQCPVPPRSTFRYKFNA--DSPGTHFWHSH----TGSQRGDGSFGAFIIRK-----P 166
+PP ++ Y+F + GT ++H H Q G GA ++ P
Sbjct: 89 -------IPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIP 141
Query: 167 RPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFR 226
RE EH++++ D L ++ H D MNGK
Sbjct: 142 ELREAE---------EHLLVLKD----LALQGGRPAPHTPMD------WMNGK------E 176
Query: 227 SNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KPISV 285
+ + + V Q + R R++NA L++ +H L I +DGG + +P+ V
Sbjct: 177 GDLVLVNGALRPTLVAQKATLRLRLLNASNARY-YRLALQDHPLYLIAADGGFLEEPLEV 235
Query: 286 GSIVSYAGERWDFILN 301
++ GER + ++
Sbjct: 236 SELLLAPGERAEVLVR 251
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 22/94 (23%)
Query: 496 DANHPFHLHGHPFRVVAM-ERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGF 554
D +HPFHLH HPF+V+++ R +DV+++ A G + R L PL++
Sbjct: 367 DMDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKA-GEVARLL--VPLREK-------- 415
Query: 555 TIIRFHATNPGYWLFHCHIEFHVETGMALVFKVG 588
G +FHCHI H + GM V +VG
Sbjct: 416 ----------GRTVFHCHIVEHEDRGMMGVLEVG 439
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 95/236 (40%), Gaps = 42/236 (17%)
Query: 55 HCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYM 114
H G K N +P P ++V GD + + + N L +E+T+IHWHG P
Sbjct: 61 HIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKL-KEATTIHWHG--VPVPPDQ 117
Query: 115 DGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSH----TGSQRGDGSFGAFIIRKPRPRE 170
DG PH R +R++ DS GT+++H H Q G GAF+I+ +
Sbjct: 118 DGSPHDPILAGEER-IYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDAL 176
Query: 171 VHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNG--KGRFKEFRSN 228
H L E ++I+D D + + P +N GR EF
Sbjct: 177 SH-------LKEKDLMISDL-------------RLDENAQIPNNNLNDWLNGREGEFVL- 215
Query: 229 ATVTYTPMEVFTVKQGHSYRFRIINAG---YLNCPIELSIANHTLTAINSDGGDIK 281
+ P +K + R RI NA YLN L I + +DGG I+
Sbjct: 216 INGQFKP----KIKLATNERIRIYNATAARYLN----LRIQGAKFILVGTDGGLIE 263
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 16/92 (17%)
Query: 498 NHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTII 557
+HPFH+HG F +++ ++ + + + L+DT+ V +
Sbjct: 406 DHPFHIHGTQFELIS-SKLNGKVQKAEF---------------RALRDTINVRPNEELRL 449
Query: 558 RFHATNPGYWLFHCHIEFHVETGMALVFKVGE 589
R G ++HCHI H + GM +V E
Sbjct: 450 RMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE 481
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRS 129
N ++PGP + GD + ++ N T IH+HG H+ MDG P + + P
Sbjct: 60 NGRIPGPTLWAREGDALRIHFTNAGAHPHT-IHFHGVHRAT---MDGTPGIGAGSIAPGQ 115
Query: 130 TFRYKFNADSPGTHFWHSHT---GSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIML 186
+F Y+F+A GTH +H H G +G FI+ P+E P D E +M+
Sbjct: 116 SFTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIV---EPKEGRPPADD----EMVMV 168
Query: 187 ITDWS 191
+ ++
Sbjct: 169 MNGYN 173
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 18/117 (15%)
Query: 480 LESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLK 539
L VE I I G + H FHLHGH R N T + D LI ++K
Sbjct: 196 LGERVEWIAIGHGSNF---HTFHLHGH--------RWLDNRTGMRTSEYDPSPLI--DIK 242
Query: 540 DAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEHEDMAPV 596
D L V+ GF +I PG W++HCH++ H + GMA +F V + P
Sbjct: 243 D--LNPGVSF---GFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADGTMPA 294
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 73 LPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFR 132
+PGP +++ GD + ++L N + S+H HG VD + V P T R
Sbjct: 55 VPGPVLEMWEGDTLEIDLVN-TTDRVLSLHPHG---VDYDVNSDGTLMNGSAVMPGQTRR 110
Query: 133 YKFNADSPGTHFWHSHTGSQRGDGSF 158
Y W SH G +R DGS+
Sbjct: 111 YT----------WRSHVGYRRADGSW 126
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 98/258 (37%), Gaps = 69/258 (26%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSP-YMDGVPHLTQCPVPPR 128
N L GPAV + G V V+++N L EE T++HWHG ++ P +DG P Q +PP
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEE-TTLHWHG---LEVPGEVDGGP---QGIIPPG 94
Query: 129 STFRYKFNADSPGTHFW-----HSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEH 183
N D P W H TG Q G G +I D
Sbjct: 95 GKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIED-------------DEILK 141
Query: 184 IMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQ 243
+ML W G + P I+ + K+F ++ + Y ++V T
Sbjct: 142 LMLPKQW----------------GIDDVPVIVQD-----KKFSADGQIDYQ-LDVMTAAV 179
Query: 244 G---------------HS-----YRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KP 282
G H+ R R++N + N L I SDGG + +P
Sbjct: 180 GWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239
Query: 283 ISVGSIVSYAGERWDFIL 300
+ V + GER++ ++
Sbjct: 240 VKVSELPVLMGERFEVLV 257
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 23/100 (23%)
Query: 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPD 551
GV HPFH+HG FR+++ R A KDTV V +
Sbjct: 408 GVGDMMLHPFHIHGTQFRILSENGKPPAAHR------------------AGWKDTVKV-E 448
Query: 552 GGFT--IIRFHATNPG--YWLFHCHIEFHVETGMALVFKV 587
G + +++F+ P ++ HCH+ H +TGM L F V
Sbjct: 449 GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 98/258 (37%), Gaps = 69/258 (26%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSP-YMDGVPHLTQCPVPPR 128
N L GPAV + G V V+++N L EE T++HWHG ++ P +DG P Q +PP
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEE-TTLHWHG---LEVPGEVDGGP---QGIIPPG 94
Query: 129 STFRYKFNADSPGTHFW-----HSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEH 183
N D P W H TG Q G G +I D
Sbjct: 95 GKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIED-------------DEILK 141
Query: 184 IMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQ 243
+ML W G + P I+ + K+F ++ + Y ++V T
Sbjct: 142 LMLPKQW----------------GIDDVPVIVQD-----KKFSADGQIDYQ-LDVMTAAV 179
Query: 244 G---------------HS-----YRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KP 282
G H+ R R++N + N L I SDGG + +P
Sbjct: 180 GWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239
Query: 283 ISVGSIVSYAGERWDFIL 300
+ V + GER++ ++
Sbjct: 240 VKVSELPVLMGERFEVLV 257
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 23/103 (22%)
Query: 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPD 551
GV HPFH+HG FR+++ R A KDTV V +
Sbjct: 360 GVGDMMLHPFHIHGTQFRILSENGKPPAAHR------------------AGWKDTVKV-E 400
Query: 552 GGFT--IIRFHATNPG--YWLFHCHIEFHVETGMALVFKVGEH 590
G + +++F+ P ++ HCH+ H +TGM L F VG H
Sbjct: 401 GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVGHH 443
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 98/258 (37%), Gaps = 69/258 (26%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSP-YMDGVPHLTQCPVPPR 128
N L GPAV + G V V+++N L EE T++HWHG ++ P +DG P Q +PP
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEE-TTLHWHG---LEVPGEVDGGP---QGIIPPG 94
Query: 129 STFRYKFNADSPGTHFW-----HSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEH 183
N D P W H TG Q G G +I D
Sbjct: 95 GKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIED-------------DEILK 141
Query: 184 IMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQ 243
+ML W G + P I+ + K+F ++ + Y ++V T
Sbjct: 142 LMLPKQW----------------GIDDVPVIVQD-----KKFSADGQIDYQ-LDVMTAAV 179
Query: 244 G---------------HS-----YRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KP 282
G H+ R R++N + N L I SDGG + +P
Sbjct: 180 GWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239
Query: 283 ISVGSIVSYAGERWDFIL 300
+ V + GER++ ++
Sbjct: 240 VKVSELPVLMGERFEVLV 257
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 25/105 (23%)
Query: 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPD 551
GV HPFH+HG FR+++ R A KDTV V +
Sbjct: 408 GVGDMMLHPFHIHGTQFRILSENGKPPAAHR------------------AGWKDTVKV-E 448
Query: 552 GGFT--IIRFHATNPG--YWLFHCHIEFHVETGMALVFKV--GEH 590
G + +++F+ P ++ HCH+ H +TGM L F V G+H
Sbjct: 449 GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVLQGDH 493
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 98/258 (37%), Gaps = 69/258 (26%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSP-YMDGVPHLTQCPVPPR 128
N L GPAV + G V V+++N L EE T++HWHG ++ P +DG P Q +PP
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEE-TTLHWHG---LEVPGEVDGGP---QGIIPPG 94
Query: 129 STFRYKFNADSPGTHFW-----HSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEH 183
N D P W H TG Q G G +I D
Sbjct: 95 GKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIED-------------DEILK 141
Query: 184 IMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQ 243
+ML W G + P I+ + K+F ++ + Y ++V T
Sbjct: 142 LMLPKQW----------------GIDDVPVIVQD-----KKFSADGQIDYQ-LDVMTAAV 179
Query: 244 G---------------HS-----YRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KP 282
G H+ R R++N + N L I SDGG + +P
Sbjct: 180 GWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239
Query: 283 ISVGSIVSYAGERWDFIL 300
+ V + GER++ ++
Sbjct: 240 VKVSELPVLMGERFEVLV 257
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 25/105 (23%)
Query: 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPD 551
GV HPFH+HG FR+++ R A KDTV V +
Sbjct: 408 GVGDMMLHPFHIHGTQFRILSENGKPPAAHR------------------AGWKDTVKV-E 448
Query: 552 GGFT--IIRFHATNPG--YWLFHCHIEFHVETGMALVFKV--GEH 590
G + +++F+ P ++ HCH+ H +TGM L F V G+H
Sbjct: 449 GNVSEVLVKFNHDAPKEHAYMAHCHLLEHDDTGMMLGFTVLQGDH 493
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 98/258 (37%), Gaps = 69/258 (26%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSP-YMDGVPHLTQCPVPPR 128
N L GPAV + G V V+++N L EE T++HWHG ++ P +DG P Q +PP
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEE-TTLHWHG---LEVPGEVDGGP---QGIIPPG 94
Query: 129 STFRYKFNADSPGTHFW-----HSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEH 183
N D P W H TG Q G G +I D
Sbjct: 95 GKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIED-------------DEILK 141
Query: 184 IMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQ 243
+ML W G + P I+ + K+F ++ + Y ++V T
Sbjct: 142 LMLPKQW----------------GIDDVPVIVQD-----KKFSADGQIDYQ-LDVMTAAV 179
Query: 244 G---------------HS-----YRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KP 282
G H+ R R++N + N L I SDGG + +P
Sbjct: 180 GWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239
Query: 283 ISVGSIVSYAGERWDFIL 300
+ V + GER++ ++
Sbjct: 240 VKVSELPVLMGERFEVLV 257
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 23/101 (22%)
Query: 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPD 551
GV HPFH+HG FR+++ R A KDTV V +
Sbjct: 408 GVGDMMLHPFHIHGTQFRILSENGKPPAAHR------------------AGWKDTVKV-E 448
Query: 552 GGFT--IIRFHATNPG--YWLFHCHIEFHVETGMALVFKVG 588
G + +++F+ P ++ H H+ H +TGM L F VG
Sbjct: 449 GNVSEVLVKFNHDAPKEHAYMAHSHLLEHQDTGMMLGFTVG 489
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 98/258 (37%), Gaps = 69/258 (26%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSP-YMDGVPHLTQCPVPPR 128
N L GPAV + G V V+++N L EE T++HWHG ++ P +DG P Q +PP
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEE-TTLHWHG---LEVPGEVDGGP---QGIIPPG 94
Query: 129 STFRYKFNADSPGTHFW-----HSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEH 183
N D P W H TG Q G G +I D
Sbjct: 95 GKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIED-------------DEILK 141
Query: 184 IMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQ 243
+ML W G + P I+ + K+F ++ + Y ++V T
Sbjct: 142 LMLPKQW----------------GIDDVPVIVQD-----KKFSADGQIDYQ-LDVMTAAV 179
Query: 244 G---------------HS-----YRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KP 282
G H+ R R++N + N L I SDGG + +P
Sbjct: 180 GWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239
Query: 283 ISVGSIVSYAGERWDFIL 300
+ V + GER++ ++
Sbjct: 240 VKVSELPVLMGERFEVLV 257
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 23/100 (23%)
Query: 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPD 551
GV HPFH+HG FR+++ R A KDTV V +
Sbjct: 408 GVGDMLLHPFHIHGTQFRILSENGKPPAAHR------------------AGWKDTVKV-E 448
Query: 552 GGFT--IIRFHATNPG--YWLFHCHIEFHVETGMALVFKV 587
G + +++F+ P ++ HCH+ H +TGM L F V
Sbjct: 449 GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 98/258 (37%), Gaps = 69/258 (26%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSP-YMDGVPHLTQCPVPPR 128
N L GPAV + G V V+++N L EE T++HWHG ++ P +DG P Q +PP
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEE-TTLHWHG---LEVPGEVDGGP---QGIIPPG 94
Query: 129 STFRYKFNADSPGTHFW-----HSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEH 183
N D P W H TG Q G G +I D
Sbjct: 95 GKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIED-------------DEILK 141
Query: 184 IMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQ 243
+ML W G + P I+ + K+F ++ + Y ++V T
Sbjct: 142 LMLPKQW----------------GIDDVPVIVQD-----KKFSADGQIDYQ-LDVMTAAV 179
Query: 244 G---------------HS-----YRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KP 282
G H+ R R++N + N L I SDGG + +P
Sbjct: 180 GWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239
Query: 283 ISVGSIVSYAGERWDFIL 300
+ V + GER++ ++
Sbjct: 240 VKVSELPVLMGERFEVLV 257
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 25/105 (23%)
Query: 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPD 551
GV HPFH+HG FR+++ R A KDTV V +
Sbjct: 408 GVGDMMLHPFHIHGTQFRILSENGKPPAAHR------------------AGWKDTVKV-E 448
Query: 552 GGFT--IIRFHATNPG--YWLFHCHIEFHVETGMALVFKV--GEH 590
G + +++F+ P ++ H H+ H +TGM L F V G+H
Sbjct: 449 GNVSEVLVKFNHDAPKEHAYMAHSHLLEHEDTGMMLGFTVLQGDH 493
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 98/258 (37%), Gaps = 69/258 (26%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSP-YMDGVPHLTQCPVPPR 128
N L GPAV + G V V+++N L EE T++HWHG ++ P +DG P Q +PP
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEE-TTLHWHG---LEVPGEVDGGP---QGIIPPG 94
Query: 129 STFRYKFNADSPGTHFW-----HSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEH 183
N D P W H TG Q G G +I D
Sbjct: 95 GKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIED-------------DEILK 141
Query: 184 IMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQ 243
+ML W G + P I+ + K+F ++ + Y ++V T
Sbjct: 142 LMLPKQW----------------GIDDVPVIVQD-----KKFSADGQIDYQ-LDVMTAAV 179
Query: 244 G---------------HS-----YRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KP 282
G H+ R R++N + N L I SDGG + +P
Sbjct: 180 GWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239
Query: 283 ISVGSIVSYAGERWDFIL 300
+ V + GER++ ++
Sbjct: 240 VKVSELPVLMGERFEVLV 257
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 25/105 (23%)
Query: 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPD 551
GV HPFH+HG FR+++ R A KDTV V +
Sbjct: 408 GVGDMMLHPFHIHGTQFRILSENGKPPAAHR------------------AGWKDTVKV-E 448
Query: 552 GGFT--IIRFHATNPG--YWLFHCHIEFHVETGMALVFKV--GEH 590
G + +++F+ P ++ HCH+ H +TGM L F V G+H
Sbjct: 449 GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVLQGDH 493
>pdb|4AKO|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: E498l Mutant
Length = 507
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 105/280 (37%), Gaps = 66/280 (23%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHW----HGHHQVDSPYMDGVPHLTQCPV 125
N PGP ++V ++V V N L S H+ H H + P + V HL
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNL----PSTHFLPIDHTIHHSEEPEVKTVVHLHGGVT 107
Query: 126 P------PRSTFRYKFNADSP--------------GTHFW-HSH----TGSQRGDGSFGA 160
P P + F F P G W H H T G GA
Sbjct: 108 PDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 167
Query: 161 FIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP-------- 212
+II P+ + + P ++D+P +LITD + +F + P
Sbjct: 168 YIIHDPKEKRLKLPSDEYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAF 224
Query: 213 ---TILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHT 269
TIL+NGK + +EV + YRFR+INA LS+ N
Sbjct: 225 CGETILVNGK------------VWPYLEV----EPRKYRFRVINASNTRT-YNLSLDNGG 267
Query: 270 -LTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVG 307
I SDGG + + + + S ER+D I++ T + G
Sbjct: 268 DFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG 307
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 497 ANHPFHLHGHPFRVVAMERVAKNITR-QDVIDMDAKG-LIRRNLKDAPLKDTVTVPDGGF 554
HP HLH FRV ++R +I R Q+ ++ G + + KDT+ G
Sbjct: 413 GTHPIHLHLVSFRV--LDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAG-- 468
Query: 555 TIIRFHAT---NPGYWLFHCHIEFHVETGM 581
++R AT G +++HCHI H++ M
Sbjct: 469 EVLRIAATFGPYSGRYVWHCHILEHLDYDM 498
>pdb|4AKQ|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: E498d Mutant
Length = 513
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 106/281 (37%), Gaps = 64/281 (22%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGL-----MEESTSIHWHGHHQVDSPYMDGVPHLTQCP 124
N PGP ++V ++V V N L + +IH H Q + P + V HL
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIH-HSDSQHEEPEVKTVVHLHGGV 110
Query: 125 VP------PRSTFRYKFNADSP--------------GTHFW-HSH----TGSQRGDGSFG 159
P P + F F P G W H H T G G
Sbjct: 111 TPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVG 170
Query: 160 AFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP------- 212
A+II P+ + + P ++D+P +LITD + +F + P
Sbjct: 171 AYIIHDPKEKRLKLPSDEYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPA 227
Query: 213 ----TILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANH 268
TIL+NGK + +EV + YRFR+INA LS+ N
Sbjct: 228 FCGETILVNGK------------VWPYLEV----EPRKYRFRVINASNTRT-YNLSLDNG 270
Query: 269 T-LTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVG 307
I SDGG + + + + S ER+D I++ T + G
Sbjct: 271 GDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG 311
>pdb|1GSK|A Chain A, Crystal Structure Of Cota, An Endospore Coat Protein From
Bacillus Subtilis
pdb|1OF0|A Chain A, Crystal Structure Of Bacillus Subtilis Cota After 1h
Soaking With Ebs
pdb|1W6L|A Chain A, 3d Structure Of Cota Incubated With Cucl2
pdb|1W6W|A Chain A, 3d Structure Of Cota Incubated With Sodium Azide
pdb|1W8E|A Chain A, 3d Structure Of Cota Incubated With Hydrogen Peroxide
pdb|2BHF|A Chain A, 3d Structure Of The Reduced Form Of Cota
pdb|2X88|A Chain A, Crystal Structure Of Holocota
pdb|3ZDW|A Chain A, Substrate And Dioxygen Binding To The Endospore Coat
Laccase Cota From Bacillus Subtilis
Length = 513
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 106/281 (37%), Gaps = 64/281 (22%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGL-----MEESTSIHWHGHHQVDSPYMDGVPHLTQCP 124
N PGP ++V ++V V N L + +IH H Q + P + V HL
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIH-HSDSQHEEPEVKTVVHLHGGV 110
Query: 125 VP------PRSTFRYKFNADSP--------------GTHFW-HSH----TGSQRGDGSFG 159
P P + F F P G W H H T G G
Sbjct: 111 TPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVG 170
Query: 160 AFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP------- 212
A+II P+ + + P ++D+P +LITD + +F + P
Sbjct: 171 AYIIHDPKEKRLKLPSDEYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPA 227
Query: 213 ----TILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANH 268
TIL+NGK + +EV + YRFR+INA LS+ N
Sbjct: 228 FCGETILVNGK------------VWPYLEV----EPRKYRFRVINASNTRT-YNLSLDNG 270
Query: 269 T-LTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVG 307
I SDGG + + + + S ER+D I++ T + G
Sbjct: 271 GDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG 311
>pdb|4A68|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116n Mutant
Length = 513
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 106/281 (37%), Gaps = 64/281 (22%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGL-----MEESTSIHWHGHHQVDSPYMDGVPHLTQCP 124
N PGP ++V ++V V N L + +IH H Q + P + V HL
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIH-HSDSQHEEPEVKTVVHLHGGV 110
Query: 125 VP------PRSTFRYKFNADSP--------------GTHFW-HSH----TGSQRGDGSFG 159
P P + F F P G W H H T G G
Sbjct: 111 TPDDSNGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVG 170
Query: 160 AFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP------- 212
A+II P+ + + P ++D+P +LITD + +F + P
Sbjct: 171 AYIIHDPKEKRLKLPSDEYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPA 227
Query: 213 ----TILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANH 268
TIL+NGK + +EV + YRFR+INA LS+ N
Sbjct: 228 FCGETILVNGK------------VWPYLEV----EPRKYRFRVINASNTRT-YNLSLDNG 270
Query: 269 T-LTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVG 307
I SDGG + + + + S ER+D I++ T + G
Sbjct: 271 GDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG 311
>pdb|4A66|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116a Mutant
Length = 513
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 106/281 (37%), Gaps = 64/281 (22%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGL-----MEESTSIHWHGHHQVDSPYMDGVPHLTQCP 124
N PGP ++V ++V V N L + +IH H Q + P + V HL
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIH-HSDSQHEEPEVKTVVHLHGGV 110
Query: 125 VP------PRSTFRYKFNADSP--------------GTHFW-HSH----TGSQRGDGSFG 159
P P + F F P G W H H T G G
Sbjct: 111 TPDDSAGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVG 170
Query: 160 AFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP------- 212
A+II P+ + + P ++D+P +LITD + +F + P
Sbjct: 171 AYIIHDPKEKRLKLPSDEYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPA 227
Query: 213 ----TILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANH 268
TIL+NGK + +EV + YRFR+INA LS+ N
Sbjct: 228 FCGETILVNGK------------VWPYLEV----EPRKYRFRVINASNTRT-YNLSLDNG 270
Query: 269 T-LTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVG 307
I SDGG + + + + S ER+D I++ T + G
Sbjct: 271 GDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG 311
>pdb|4A67|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116e Mutant
Length = 513
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 106/281 (37%), Gaps = 64/281 (22%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGL-----MEESTSIHWHGHHQVDSPYMDGVPHLTQCP 124
N PGP ++V ++V V N L + +IH H Q + P + V HL
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIH-HSDSQHEEPEVKTVVHLHGGV 110
Query: 125 VP------PRSTFRYKFNADSP--------------GTHFW-HSH----TGSQRGDGSFG 159
P P + F F P G W H H T G G
Sbjct: 111 TPDDSEGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVG 170
Query: 160 AFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP------- 212
A+II P+ + + P ++D+P +LITD + +F + P
Sbjct: 171 AYIIHDPKEKRLKLPSDEYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPA 227
Query: 213 ----TILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANH 268
TIL+NGK + +EV + YRFR+INA LS+ N
Sbjct: 228 FCGETILVNGK------------VWPYLEV----EPRKYRFRVINASNTRT-YNLSLDNG 270
Query: 269 T-LTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVG 307
I SDGG + + + + S ER+D I++ T + G
Sbjct: 271 GDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG 311
>pdb|4AKP|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site:e498t Mutant
Length = 513
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 106/281 (37%), Gaps = 64/281 (22%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGL-----MEESTSIHWHGHHQVDSPYMDGVPHLTQCP 124
N PGP ++V ++V V N L + +IH H Q + P + V HL
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIH-HSDSQHEEPEVKTVVHLHGGV 110
Query: 125 VP------PRSTFRYKFNADSP--------------GTHFW-HSH----TGSQRGDGSFG 159
P P + F F P G W H H T G G
Sbjct: 111 TPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVG 170
Query: 160 AFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP------- 212
A+II P+ + + P ++D+P +LITD + +F + P
Sbjct: 171 AYIIHDPKEKRLKLPSDEYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPA 227
Query: 213 ----TILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANH 268
TIL+NGK + +EV + YRFR+INA LS+ N
Sbjct: 228 FCGETILVNGK------------VWPYLEV----EPRKYRFRVINASNTRT-YNLSLDNG 270
Query: 269 T-LTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVG 307
I SDGG + + + + S ER+D I++ T + G
Sbjct: 271 GDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG 311
>pdb|2WSD|A Chain A, Proximal Mutations At The Type 1 Cu Site Of Cota-Laccase:
I494a Mutant
Length = 513
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 106/281 (37%), Gaps = 64/281 (22%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGL-----MEESTSIHWHGHHQVDSPYMDGVPHLTQCP 124
N PGP ++V ++V V N L + +IH H Q + P + V HL
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIH-HSDSQHEEPEVKTVVHLHGGV 110
Query: 125 VP------PRSTFRYKFNADSP--------------GTHFW-HSH----TGSQRGDGSFG 159
P P + F F P G W H H T G G
Sbjct: 111 TPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVG 170
Query: 160 AFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP------- 212
A+II P+ + + P ++D+P +LITD + +F + P
Sbjct: 171 AYIIHDPKEKRLKLPSDEYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPA 227
Query: 213 ----TILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANH 268
TIL+NGK + +EV + YRFR+INA LS+ N
Sbjct: 228 FCGETILVNGK------------VWPYLEV----EPRKYRFRVINASNTRT-YNLSLDNG 270
Query: 269 T-LTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVG 307
I SDGG + + + + S ER+D I++ T + G
Sbjct: 271 GDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG 311
>pdb|2X87|A Chain A, Crystal Structure Of The Reconstituted Cota
Length = 513
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 106/281 (37%), Gaps = 64/281 (22%)
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGL-----MEESTSIHWHGHHQVDSPYMDGVPHLTQCP 124
N PGP ++V ++V V N L + +IH H Q + P + V HL
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIH-HSDSQHEEPEVKTVVHLHGGV 110
Query: 125 VP------PRSTFRYKFNADSP--------------GTHFW-HSH----TGSQRGDGSFG 159
P P + F F P G W H H T G G
Sbjct: 111 TPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVG 170
Query: 160 AFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPP------- 212
A+II P+ + + P ++D+P +LITD + +F + P
Sbjct: 171 AYIIHDPKEKRLKLPSDEYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPA 227
Query: 213 ----TILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANH 268
TIL+NGK + +EV + YRFR+INA LS+ N
Sbjct: 228 FCGETILVNGK------------VWPYLEV----EPRKYRFRVINASNTRT-YNLSLDNG 270
Query: 269 T-LTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVG 307
I SDGG + + + + S ER+D I++ T + G
Sbjct: 271 GDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG 311
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 18/112 (16%)
Query: 484 VELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPL 543
VE+++I G Y H FH+HGH R A N T D +I +
Sbjct: 182 VEIVMITHGEYY---HTFHMHGH--------RWADNRTGILTGPDDPSRVIDNKI----- 225
Query: 544 KDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEHEDMAP 595
T GF II G W++HCH++ H + GM +F V + + P
Sbjct: 226 --TGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIP 275
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 18/112 (16%)
Query: 484 VELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPL 543
VE+++I G Y H FH+HGH R A N T D +I +
Sbjct: 181 VEIVMITHGEYY---HTFHMHGH--------RWADNRTGILTGPDDPSRVIDNKI----- 224
Query: 544 KDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEHEDMAP 595
T GF II G W++HCH++ H + GM +F V + + P
Sbjct: 225 --TGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIP 274
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 18/112 (16%)
Query: 484 VELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPL 543
VE+++I G Y H FH+HGH R A N T D +I +
Sbjct: 178 VEIVMITHGEYY---HTFHMHGH--------RWADNRTGILTGPDDPSRVIDNKI----- 221
Query: 544 KDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEHEDMAP 595
T GF II G W++HCH++ H + GM +F V + + P
Sbjct: 222 --TGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIP 271
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 18/104 (17%)
Query: 484 VELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPL 543
VE+++I G Y H FH+HGH R A N T D +I +
Sbjct: 219 VEIVMITHGEYY---HTFHMHGH--------RWADNRTGILTGPDDPSRVIDNKI----- 262
Query: 544 KDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587
T GF II G W++HCH++ H + GM +F V
Sbjct: 263 --TGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLV 304
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 18/104 (17%)
Query: 484 VELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPL 543
VE ++I G Y H FHLHGH R A N T D +I +
Sbjct: 184 VEFVMITHGEYY---HTFHLHGH--------RWADNRTGMLTGPDDPSQVIDNKI--CGP 230
Query: 544 KDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587
D+ GF +I G W++HCH++ H + GM +F V
Sbjct: 231 ADSF-----GFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLV 269
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 26/94 (27%)
Query: 499 HPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIR 558
H H HGH F+ + + DV D + G + +
Sbjct: 994 HTVHFHGHSFQYKH-----RGVYSSDVFD---------------------IFPGTYQTLE 1027
Query: 559 FHATNPGYWLFHCHIEFHVETGMALVFKVGEHED 592
PG WL HCH+ H+ GM + V ++ED
Sbjct: 1028 MFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 26/94 (27%)
Query: 499 HPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIR 558
H H HGH F+ + + DV D + G + +
Sbjct: 975 HTVHFHGHSFQYKH-----RGVYSSDVFD---------------------IFPGTYQTLE 1008
Query: 559 FHATNPGYWLFHCHIEFHVETGMALVFKVGEHED 592
PG WL HCH+ H+ GM + V ++ED
Sbjct: 1009 MFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1042
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Query: 546 TVTVPDGG----FT------IIRFHATNPGYWLFHCH---IEFHVETGMALVFKVGEHED 592
VT P GG FT F A NPG +++HC + H+ GM + V E
Sbjct: 90 AVTGPGGGAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG 149
Query: 593 MAPVPKDFPTC-GDYY 607
+APV +++ GD+Y
Sbjct: 150 LAPVDREYYLVQGDFY 165
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 12/120 (10%)
Query: 59 ADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP 118
ADGV+ +PG + V GD + NL N S H H V P
Sbjct: 43 ADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSN--HPSSKMPHNIDLHAVTGPGGGAES 100
Query: 119 HLTQCPVPPRSTFRYKFNADSPGTHFWHSHT---GSQRGDGSFGAFIIRKPRPREVHAPL 175
T P T + F A +PG + +H T G +G +G ++ P+E AP+
Sbjct: 101 SFTA----PGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILV---EPKEGLAPV 153
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 499 HPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFT--I 556
HP HLHG P ++ + + + + +D +G R D LKDTV + G +
Sbjct: 362 HPMHLHGFPMWIIERKDSPRQVAE---LAVDNRG---RLPTDLGLKDTVLIWPGETVKIV 415
Query: 557 IRFHATNPGYWL-FHCHIEFHVETGMALVFKV 587
+ F A G FHCH H + GM + V
Sbjct: 416 VNFDAKKRGQLFPFHCHNLEHEDGGMMINIAV 447
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 39/218 (17%)
Query: 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKF 135
P + + G V + L N L E T +HWHG + + D P + P ++ Y F
Sbjct: 38 PTIILRRGQRVDMTLKNKL-TEPTIVHWHGFDV--NWHNDAHPSFA---ITPGESYNYSF 91
Query: 136 N-ADSPGTHFWHSH----TGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLITDW 190
+ + GT+ +H H T Q G G I+ ++ DLP ++I+D
Sbjct: 92 DVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVED-SGSDLGFKYGVNDLP---LVISDR 147
Query: 191 SHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFR 250
+ G ++N P ++ G F NA + + G SYR R
Sbjct: 148 RFIGGAPVYNPT---------PMEMIAG------FLGNAVLVNGVKDAVFKLSGGSYRLR 192
Query: 251 IINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSI 288
++N S A + +I GD+ P+ + ++
Sbjct: 193 LVNG---------SNARLYMLSIVKKNGDVVPMRLIAV 221
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 475 VVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLI 534
+ NVP+ +V +I+ G + HP H+H F+V++ R + N R V+ ++
Sbjct: 376 LANVPVGTVERWELINAGNGW--THPIHIHLVDFKVIS--RTSGNNART-VMPYESG--- 427
Query: 535 RRNLKDAPLKDTVTVPDGGFTIIRFH-ATNPGYWLFHCHIEFHVETGMALVFKV 587
LKD V + ++ H A PG ++FHCH H + M F
Sbjct: 428 --------LKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNA 473
>pdb|1ET7|A Chain A, Crystal Structure Of Nitrite Reductase His255asp Mutant
From Alcaligenes Faecalis S-6
Length = 341
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|1ET8|A Chain A, Crystal Structure Of Nitrite Reductase His255asn Mutant
From Alcaligenes Faecalis
pdb|1J9S|A Chain A, Crystal Structure Of Nitrite Soaked Oxidized H255n Afnir
pdb|1J9S|B Chain B, Crystal Structure Of Nitrite Soaked Oxidized H255n Afnir
pdb|1J9S|C Chain C, Crystal Structure Of Nitrite Soaked Oxidized H255n Afnir
pdb|1J9T|A Chain A, Crystal Structure Of Nitrite Soaked Reduced H255n Afnir
pdb|1J9T|B Chain B, Crystal Structure Of Nitrite Soaked Reduced H255n Afnir
pdb|1J9T|C Chain C, Crystal Structure Of Nitrite Soaked Reduced H255n Afnir
Length = 341
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|2AFN|A Chain A, Structure Of Alcaligenes Faecalis Nitrite Reductase And A
Copper Site Mutant, M150e, That Contains Zinc
pdb|2AFN|B Chain B, Structure Of Alcaligenes Faecalis Nitrite Reductase And A
Copper Site Mutant, M150e, That Contains Zinc
pdb|2AFN|C Chain C, Structure Of Alcaligenes Faecalis Nitrite Reductase And A
Copper Site Mutant, M150e, That Contains Zinc
pdb|1AQ8|A Chain A, Structure Of Alcaligenes Faecalis Nitrite Reductase
Reduced With Ascorbate
pdb|1AQ8|B Chain B, Structure Of Alcaligenes Faecalis Nitrite Reductase
Reduced With Ascorbate
pdb|1AQ8|C Chain C, Structure Of Alcaligenes Faecalis Nitrite Reductase
Reduced With Ascorbate
pdb|1AS6|A Chain A, Structure Of Nitrite Bound To Oxidized Alcaligenes
Faecalis Nitrite Reductase At Cryo Temperature
pdb|1AS6|B Chain B, Structure Of Nitrite Bound To Oxidized Alcaligenes
Faecalis Nitrite Reductase At Cryo Temperature
pdb|1AS6|C Chain C, Structure Of Nitrite Bound To Oxidized Alcaligenes
Faecalis Nitrite Reductase At Cryo Temperature
pdb|1AS7|A Chain A, Structure Of Alcaligenes Faecalis Nitrite Reductase At
Cryo Temperature
pdb|1AS7|B Chain B, Structure Of Alcaligenes Faecalis Nitrite Reductase At
Cryo Temperature
pdb|1AS7|C Chain C, Structure Of Alcaligenes Faecalis Nitrite Reductase At
Cryo Temperature
pdb|1AS8|A Chain A, Structure Of Nitrite Bound To Reduced Alcaligenes Faecalis
Nitrite Reductase At Cryo Temperature
pdb|1AS8|B Chain B, Structure Of Nitrite Bound To Reduced Alcaligenes Faecalis
Nitrite Reductase At Cryo Temperature
pdb|1AS8|C Chain C, Structure Of Nitrite Bound To Reduced Alcaligenes Faecalis
Nitrite Reductase At Cryo Temperature
Length = 343
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 120 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 153
>pdb|3H4H|A Chain A, Met94thrPHE312CYS VARIANT OF NITRITE REDUCTASE FROM
Alcaligenes Faecalis
pdb|3H4H|B Chain B, Met94thrPHE312CYS VARIANT OF NITRITE REDUCTASE FROM
Alcaligenes Faecalis
pdb|3H4H|C Chain C, Met94thrPHE312CYS VARIANT OF NITRITE REDUCTASE FROM
Alcaligenes Faecalis
Length = 335
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 113 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 146
>pdb|2FJS|A Chain A, Crystal Structure Of Anaerobically Reduced Wild Type
Nitrite Reductase From A. Faecalis
pdb|2FJS|B Chain B, Crystal Structure Of Anaerobically Reduced Wild Type
Nitrite Reductase From A. Faecalis
pdb|2FJS|C Chain C, Crystal Structure Of Anaerobically Reduced Wild Type
Nitrite Reductase From A. Faecalis
pdb|2E86|A Chain A, Azide Bound To Copper Containing Nitrite Reductase From A.
Faecalis S- 6
pdb|2E86|B Chain B, Azide Bound To Copper Containing Nitrite Reductase From A.
Faecalis S- 6
pdb|2E86|C Chain C, Azide Bound To Copper Containing Nitrite Reductase From A.
Faecalis S- 6
Length = 337
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|1L9O|A Chain A, Crystal Structure Of Nitrite Soaked I257a Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalis
pdb|1L9O|B Chain B, Crystal Structure Of Nitrite Soaked I257a Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalis
pdb|1L9O|C Chain C, Crystal Structure Of Nitrite Soaked I257a Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalis
Length = 341
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|1L9T|A Chain A, Crystal Structure Of The I257v Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9T|B Chain B, Crystal Structure Of The I257v Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9T|C Chain C, Crystal Structure Of The I257v Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|1SJM|A Chain A, Nitrite Bound Copper Containing Nitrite Reductase
pdb|1SJM|B Chain B, Nitrite Bound Copper Containing Nitrite Reductase
pdb|1SJM|C Chain C, Nitrite Bound Copper Containing Nitrite Reductase
pdb|1SNR|A Chain A, Nitric Oxide Bound To Cu Nitrite Reductase
pdb|1SNR|B Chain B, Nitric Oxide Bound To Cu Nitrite Reductase
pdb|1SNR|C Chain C, Nitric Oxide Bound To Cu Nitrite Reductase
pdb|2P80|A Chain A, Solution Structure Of The Complex Between Nitrite
Reductase And Pseudoazurin From A. Faecalis
pdb|2P80|B Chain B, Solution Structure Of The Complex Between Nitrite
Reductase And Pseudoazurin From A. Faecalis
pdb|2P80|C Chain C, Solution Structure Of The Complex Between Nitrite
Reductase And Pseudoazurin From A. Faecalis
pdb|2PP7|A Chain A, Crystal Structure Of Anaerobically Manipulated Wild Type
Oxidized Afnir (acetate Bound)
pdb|2PP7|B Chain B, Crystal Structure Of Anaerobically Manipulated Wild Type
Oxidized Afnir (acetate Bound)
pdb|2PP7|C Chain C, Crystal Structure Of Anaerobically Manipulated Wild Type
Oxidized Afnir (acetate Bound)
pdb|2PP8|A Chain A, Formate Bound To Oxidized Wild Type Afnir
pdb|2PP8|B Chain B, Formate Bound To Oxidized Wild Type Afnir
pdb|2PP8|C Chain C, Formate Bound To Oxidized Wild Type Afnir
pdb|2PP9|A Chain A, Nitrate Bound Wild Type Oxidized Afnir
pdb|2PP9|B Chain B, Nitrate Bound Wild Type Oxidized Afnir
pdb|2PP9|C Chain C, Nitrate Bound Wild Type Oxidized Afnir
pdb|2PPA|A Chain A, Anaerobically Manipulated Wild Type Oxidized Afnir Bound
To Nitrous Oxide
pdb|2PPA|B Chain B, Anaerobically Manipulated Wild Type Oxidized Afnir Bound
To Nitrous Oxide
pdb|2PPA|C Chain C, Anaerobically Manipulated Wild Type Oxidized Afnir Bound
To Nitrous Oxide
pdb|2PPC|A Chain A, Oxidized Wild Type Afnir Exposed To No (Nitrite Bound)
pdb|2PPC|B Chain B, Oxidized Wild Type Afnir Exposed To No (Nitrite Bound)
pdb|2PPC|C Chain C, Oxidized Wild Type Afnir Exposed To No (Nitrite Bound)
Length = 341
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|1L9S|A Chain A, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9S|B Chain B, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9S|C Chain C, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|3H4F|A Chain A, Met62leu Variant Of Nitrite Reductase From Alcaligenes
Faeclis
pdb|3H4F|B Chain B, Met62leu Variant Of Nitrite Reductase From Alcaligenes
Faeclis
pdb|3H4F|C Chain C, Met62leu Variant Of Nitrite Reductase From Alcaligenes
Faeclis
Length = 336
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|1L9Q|A Chain A, Crystal Structure Of The I257l Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9Q|B Chain B, Crystal Structure Of The I257l Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9Q|C Chain C, Crystal Structure Of The I257l Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|1L9R|A Chain A, Crystal Structure Of The I257m Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9R|B Chain B, Crystal Structure Of The I257m Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9R|C Chain C, Crystal Structure Of The I257m Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|1ET5|A Chain A, Crystal Structure Of Nitrite Reductase Asp98asn Mutant
From Alcaligenes Faecalis S-6
pdb|1J9Q|A Chain A, Crystal Structure Of Nitrite Soaked Oxidized D98n Afnir
pdb|1J9Q|B Chain B, Crystal Structure Of Nitrite Soaked Oxidized D98n Afnir
pdb|1J9Q|C Chain C, Crystal Structure Of Nitrite Soaked Oxidized D98n Afnir
pdb|1J9R|A Chain A, Crystal Structure Of Nitrite Soaked Reduced D98n Afnir
pdb|1J9R|B Chain B, Crystal Structure Of Nitrite Soaked Reduced D98n Afnir
pdb|1J9R|C Chain C, Crystal Structure Of Nitrite Soaked Reduced D98n Afnir
pdb|2PPF|A Chain A, Reduced Mutant D98n Of Afnir Exposed To Nitric Oxide
pdb|2PPF|B Chain B, Reduced Mutant D98n Of Afnir Exposed To Nitric Oxide
pdb|2PPF|C Chain C, Reduced Mutant D98n Of Afnir Exposed To Nitric Oxide
Length = 341
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|1L9P|A Chain A, Crystal Structure Of Nitrite Soaked I257g Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalies S-6
pdb|1L9P|B Chain B, Crystal Structure Of Nitrite Soaked I257g Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalies S-6
pdb|1L9P|C Chain C, Crystal Structure Of Nitrite Soaked I257g Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalies S-6
Length = 341
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +GM
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGM 147
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 559 FHATNPGYWLFHCHIE---FHVETGMALVFKVGEHEDMAPVPKDFPTC-GDYY 607
F A PG +++HC + H+ GM + V E + V K+F GD+Y
Sbjct: 123 FKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFY 175
>pdb|1KCB|A Chain A, Crystal Structure Of A No-Forming Nitrite Reductase
Mutant: An Analog Of A Transition State In Enzymatic
Reaction
Length = 340
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHCHIE----FHVETGM 581
G T +RF AT PG +++HC E +HV +GM
Sbjct: 117 GEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGM 150
>pdb|1NIB|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIB|B Chain B, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIB|C Chain C, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|A Chain A, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|B Chain B, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|C Chain C, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2BW4|A Chain A, Atomic Resolution Structure Of Resting State Of The
Achromobacter Cycloclastes Cu Nitrite Reductase
pdb|2BW5|A Chain A, Atomic Resolution Structure Of No-Bound Achromobacter
Cycloclastes Cu Nitrite Reductase
pdb|2BWD|A Chain A, Atomic Resolution Structure Of Achromobacter Cycloclastes
Cu Nitrite Reductase With Endogenously Bound Nitrite And
No
pdb|2BWI|A Chain A, Atomic Resolution Structure Of Nitrite -Soaked
Achromobacter Cycloclastes Cu Nitrite Reductase
pdb|1NIC|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NID|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIE|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIF|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2NRD|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2Y1A|A Chain A, Crystal Structure Of Achromobacter Cycloclastes Cu Nitrite
Reductase With Bound No
Length = 340
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHCHIE----FHVETGM 581
G T +RF AT PG +++HC E +HV +GM
Sbjct: 117 GEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGM 150
>pdb|3H56|A Chain A, Met150leuPHE312CYS VARIANT OF NITRITE REDUCTASE FROM
Alcaligenes Faecalis
Length = 336
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETGM 581
G TI+RF AT PG +++HC + +HV +G+
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSGL 147
>pdb|1RZP|A Chain A, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZP|B Chain B, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZP|C Chain C, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZQ|A Chain A, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
pdb|1RZQ|B Chain B, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
pdb|1RZQ|C Chain C, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
Length = 335
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHCHIE----FHVETGM 581
G T +RF AT PG +++HC E +HV +GM
Sbjct: 117 GEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGM 150
>pdb|2AVF|A Chain A, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|B Chain B, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|C Chain C, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|D Chain D, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|E Chain E, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|F Chain F, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
Length = 329
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 552 GGFTIIRFHATNPGYWLFHCHIE----FHVETGM 581
G T +RF AT PG +++HC E +HV +GM
Sbjct: 117 GEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGM 150
>pdb|1NTD|A Chain A, Structure Of Alcaligenes Faecalis Nitrite Reductase Mutant
M150e That Contains Zinc
Length = 343
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETG 580
G TI+RF AT PG +++HC + +HV +G
Sbjct: 120 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSG 152
>pdb|2B08|A Chain A, Reduced Acetamide-Bound M150g Nitrite Reductase From
Alcaligenes Faecalis
pdb|2B08|B Chain B, Reduced Acetamide-Bound M150g Nitrite Reductase From
Alcaligenes Faecalis
pdb|2B08|C Chain C, Reduced Acetamide-Bound M150g Nitrite Reductase From
Alcaligenes Faecalis
Length = 340
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETG 580
G TI+RF AT PG +++HC + +HV +G
Sbjct: 117 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSG 149
>pdb|1ZDQ|A Chain A, Crystal Structure Of Met150gly Afnir With Methylsulfanyl
Methane Bound
pdb|1ZDQ|B Chain B, Crystal Structure Of Met150gly Afnir With Methylsulfanyl
Methane Bound
pdb|1ZDQ|C Chain C, Crystal Structure Of Met150gly Afnir With Methylsulfanyl
Methane Bound
pdb|1ZDS|A Chain A, Crystal Structure Of Met150gly Afnir With Acetamide Bound
pdb|1ZDS|B Chain B, Crystal Structure Of Met150gly Afnir With Acetamide Bound
pdb|1ZDS|C Chain C, Crystal Structure Of Met150gly Afnir With Acetamide Bound
Length = 336
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 552 GGFTIIRFHATNPGYWLFHC----HIEFHVETG 580
G TI+RF AT PG +++HC + +HV +G
Sbjct: 114 GEKTILRFKATKPGVFVYHCAPPGMVPWHVVSG 146
>pdb|1NPJ|A Chain A, Crystal Structure Of H145a Mutant Of Nitrite Reductase
From Alcaligenes Faecalis
pdb|1NPJ|B Chain B, Crystal Structure Of H145a Mutant Of Nitrite Reductase
From Alcaligenes Faecalis
pdb|1NPJ|C Chain C, Crystal Structure Of H145a Mutant Of Nitrite Reductase
From Alcaligenes Faecalis
pdb|1NPN|A Chain A, Crystal Structure Of A Copper Reconstituted H145a Mutant
Of Nitrite Reductase From Alcaligenes Faecalis
pdb|1NPN|B Chain B, Crystal Structure Of A Copper Reconstituted H145a Mutant
Of Nitrite Reductase From Alcaligenes Faecalis
pdb|1NPN|C Chain C, Crystal Structure Of A Copper Reconstituted H145a Mutant
Of Nitrite Reductase From Alcaligenes Faecalis
pdb|2PPD|A Chain A, Oxidized H145a Mutant Of Afnir Bound To Nitric Oxide
pdb|2PPD|B Chain B, Oxidized H145a Mutant Of Afnir Bound To Nitric Oxide
pdb|2PPD|C Chain C, Oxidized H145a Mutant Of Afnir Bound To Nitric Oxide
pdb|2PPE|A Chain A, Reduced H145a Mutant Of Afnir Exposed To No
pdb|2PPE|B Chain B, Reduced H145a Mutant Of Afnir Exposed To No
pdb|2PPE|C Chain C, Reduced H145a Mutant Of Afnir Exposed To No
Length = 343
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 552 GGFTIIRFHATNPGYWLFHC 571
G TI+RF AT PG +++HC
Sbjct: 120 GEKTILRFKATKPGVFVYHC 139
>pdb|1DLM|A Chain A, Structure Of Catechol 1,2-Dioxygenase From Acinetobacter
Calcoaceticus Native Data
pdb|1DLM|B Chain B, Structure Of Catechol 1,2-Dioxygenase From Acinetobacter
Calcoaceticus Native Data
pdb|1DLQ|A Chain A, Structure Of Catechol 1,2-Dioxygenase From Acinetobacter
Sp. Adp1 Inhibited By Bound Mercury
pdb|1DLQ|B Chain B, Structure Of Catechol 1,2-Dioxygenase From Acinetobacter
Sp. Adp1 Inhibited By Bound Mercury
pdb|1DLT|A Chain A, Structure Of Catechol 1,2-Dioxygenase From Acinetobacter
Sp. Adp1 With Bound Catechol
pdb|1DLT|B Chain B, Structure Of Catechol 1,2-Dioxygenase From Acinetobacter
Sp. Adp1 With Bound Catechol
pdb|1DMH|A Chain A, Structure Of Catechol 1,2-Dioxygenase From Acinetobacter
Sp. Adp1 With Bound 4-Methylcatechol
pdb|1DMH|B Chain B, Structure Of Catechol 1,2-Dioxygenase From Acinetobacter
Sp. Adp1 With Bound 4-Methylcatechol
Length = 311
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 57/161 (35%), Gaps = 21/161 (13%)
Query: 113 YMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVH 172
Y GV +L Q + SPG F H R D A I PR +
Sbjct: 55 YWAGVAYLNQLGANQEAGLL------SPGLGF--DHYLDMRMDAEDAALGIENATPRTIE 106
Query: 173 APLYDFDLPEHI--MLITDWSHVLGVEMFNAHHHADGDNKP-PTILM-----NGKGRFKE 224
PLY PE + + D S G + D D KP P + N KG +
Sbjct: 107 GPLYVAGAPESVGYARMDDGSDPNGHTLILHGTIFDADGKPLPNAKVEIWHANTKGFYSH 166
Query: 225 FRSNATVTYTPME--VFTVKQGHSYRFR-IINAGYLNCPIE 262
F M + T + G YR R I+ AGY CP E
Sbjct: 167 FDPTGEQQAFNMRRSIITDENGQ-YRVRTILPAGY-GCPPE 205
>pdb|2DV6|A Chain A, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|B Chain B, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|C Chain C, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|D Chain D, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|E Chain E, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|F Chain F, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
Length = 447
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 555 TIIRFHATNPGYWLFHC---HIEFHVETGMALVFKVGEHEDMAPVPKDFPTC-GDYYNVD 610
T++ F A PG +++HC + H+ GM + V + V ++F G+ Y V
Sbjct: 244 TVVTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGLPQVDREFYVMQGEIYTVK 303
Query: 611 S 611
S
Sbjct: 304 S 304
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,133,721
Number of Sequences: 62578
Number of extensions: 1029732
Number of successful extensions: 2422
Number of sequences better than 100.0: 88
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2083
Number of HSP's gapped (non-prelim): 206
length of query: 695
length of database: 14,973,337
effective HSP length: 106
effective length of query: 589
effective length of database: 8,340,069
effective search space: 4912300641
effective search space used: 4912300641
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)