Query psy978
Match_columns 695
No_of_seqs 306 out of 1898
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 19:23:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy978.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/978hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 3.7E-99 1E-103 863.0 53.7 515 22-611 1-546 (552)
2 3sqr_A Laccase; multicopper ox 100.0 3.4E-97 1E-101 841.5 54.2 492 22-608 65-566 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 1E-96 4E-101 828.0 49.9 479 25-609 4-494 (499)
4 3t6v_A Laccase; beta barrel, o 100.0 1.4E-96 5E-101 826.9 49.4 476 26-607 6-492 (495)
5 1zpu_A Iron transport multicop 100.0 3.4E-96 1E-100 833.1 51.0 512 23-657 1-533 (534)
6 1v10_A Laccase; multicopper bl 100.0 2.2E-93 7.6E-98 808.9 47.1 484 22-610 21-515 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 5.7E-92 1.9E-96 794.6 45.7 476 26-610 6-494 (503)
8 2q9o_A Laccase-1; multicopper 100.0 5.6E-91 1.9E-95 795.0 47.3 502 22-609 31-546 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 2E-80 6.9E-85 689.8 40.6 405 22-588 14-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 7.4E-79 2.5E-83 678.3 35.7 406 24-590 18-442 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 1.8E-77 6E-82 678.6 43.7 445 23-612 35-500 (534)
12 2wsd_A Spore coat protein A; o 100.0 3.3E-77 1.1E-81 675.6 43.3 417 57-589 39-510 (513)
13 3aw5_A Multicopper oxidase; be 100.0 9.8E-77 3.4E-81 660.3 31.7 393 65-588 26-448 (448)
14 3gyr_A PHS, phenoxazinone synt 100.0 8.3E-76 2.9E-80 680.6 39.9 460 57-592 46-594 (612)
15 3zx1_A Oxidoreductase, putativ 100.0 1.3E-74 4.6E-79 644.8 42.7 418 22-588 48-480 (481)
16 3od3_A Blue copper oxidase CUE 100.0 2.7E-72 9.2E-77 626.0 36.4 431 24-587 17-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 2.1E-70 7.1E-75 625.5 45.3 470 23-590 31-592 (612)
18 3g5w_A Multicopper oxidase typ 100.0 1.6E-50 5.5E-55 430.1 30.6 273 23-338 1-278 (318)
19 2zwn_A Two-domain type laccase 100.0 1.7E-49 5.8E-54 426.6 33.7 273 23-338 2-279 (339)
20 2j5w_A Ceruloplasmin, ferroxid 100.0 1.8E-49 6.2E-54 481.9 38.0 252 59-339 63-359 (1065)
21 3gdc_A Multicopper oxidase; be 100.0 4E-50 1.4E-54 421.8 27.3 141 22-193 32-175 (288)
22 2r7e_A Coagulation factor VIII 100.0 4.3E-52 1.5E-56 486.2 12.3 225 61-315 63-313 (742)
23 3kw8_A Laccase, putative coppe 100.0 1.1E-48 3.9E-53 408.3 24.1 120 22-168 5-143 (276)
24 2dv6_A Nitrite reductase; elec 100.0 2.9E-48 9.8E-53 433.1 26.0 383 63-589 43-433 (447)
25 3t9w_A Small laccase, multi-co 100.0 2.9E-48 1E-52 409.3 20.9 103 62-168 44-165 (299)
26 2j5w_A Ceruloplasmin, ferroxid 100.0 1.6E-48 5.5E-53 473.6 20.1 405 62-590 616-1059(1065)
27 1kbv_A ANIA, major outer membr 100.0 2.6E-46 8.8E-51 399.8 23.5 268 22-339 36-310 (327)
28 3tas_A Small laccase, multi-co 100.0 3.3E-45 1.1E-49 388.7 29.8 169 59-277 24-212 (313)
29 3cg8_A Laccase; oxidoreductase 100.0 1.7E-44 5.8E-49 387.5 22.8 119 22-168 46-184 (343)
30 1mzy_A Copper-containing nitri 100.0 1.4E-42 4.8E-47 372.3 27.7 272 22-338 30-320 (333)
31 1oe1_A Dissimilatory copper-co 100.0 2.7E-42 9.4E-47 370.5 28.2 274 22-339 30-321 (336)
32 2zoo_A Probable nitrite reduct 100.0 9.6E-43 3.3E-47 387.8 24.5 268 22-339 26-300 (442)
33 2bw4_A Copper-containing nitri 100.0 2.4E-41 8.1E-46 363.8 26.6 273 22-338 36-326 (340)
34 1sdd_A Coagulation factor V; c 100.0 4.2E-41 1.4E-45 356.3 8.7 219 64-316 49-285 (306)
35 1sdd_B Coagulation factor V; c 100.0 3.7E-39 1.3E-43 374.8 21.0 224 70-316 63-312 (647)
36 2r7e_B Coagulation factor VIII 100.0 1.2E-38 4E-43 373.3 16.4 267 22-316 131-441 (770)
37 2dv6_A Nitrite reductase; elec 100.0 8.4E-37 2.9E-41 340.5 27.1 248 60-338 179-435 (447)
38 2r7e_A Coagulation factor VIII 100.0 1.8E-36 6.2E-41 354.3 8.1 224 70-318 446-698 (742)
39 2zwn_A Two-domain type laccase 99.9 1.2E-25 4E-30 241.2 22.4 245 211-589 23-277 (339)
40 3g5w_A Multicopper oxidase typ 99.9 6.5E-25 2.2E-29 233.1 18.4 247 212-589 23-276 (318)
41 1sdd_B Coagulation factor V; c 99.8 3.9E-20 1.4E-24 214.8 18.8 247 234-589 66-327 (647)
42 1sdd_A Coagulation factor V; c 99.8 2E-21 6.8E-26 205.4 4.5 227 237-589 60-300 (306)
43 1kbv_A ANIA, major outer membr 99.8 1.7E-18 5.8E-23 184.6 21.4 246 212-589 59-307 (327)
44 2bw4_A Copper-containing nitri 99.8 5.1E-18 1.7E-22 182.0 21.7 91 474-589 231-324 (340)
45 2r7e_B Coagulation factor VIII 99.8 8.1E-20 2.8E-24 214.1 7.4 87 475-588 369-455 (770)
46 1mzy_A Copper-containing nitri 99.7 8.2E-16 2.8E-20 164.3 24.0 90 475-589 226-318 (333)
47 1oe1_A Dissimilatory copper-co 99.7 9E-15 3.1E-19 156.4 24.2 91 474-589 225-318 (336)
48 2zoo_A Probable nitrite reduct 99.7 2.7E-15 9.1E-20 166.5 20.3 93 475-590 205-298 (442)
49 2uxt_A Protein SUFI, SUFI; oxi 99.6 5.6E-15 1.9E-19 164.1 19.6 220 61-316 179-426 (451)
50 2xu9_A Laccase; oxidoreductase 99.6 4.8E-15 1.6E-19 164.2 15.6 221 61-316 174-425 (439)
51 3cvb_A Plastocyanin; cupredoxi 99.6 1.5E-15 5E-20 134.2 4.4 89 71-165 14-105 (105)
52 3kw8_A Laccase, putative coppe 99.5 2.2E-14 7.5E-19 149.1 10.1 102 67-171 157-271 (276)
53 1hfu_A Laccase 1; oxidoreducta 99.5 4.5E-13 1.5E-17 150.8 18.7 247 64-316 165-455 (503)
54 1v10_A Laccase; multicopper bl 99.5 5.2E-13 1.8E-17 150.8 18.5 245 64-316 191-476 (521)
55 2cal_A Rusticyanin; iron respi 99.4 1.1E-13 3.9E-18 130.7 8.3 100 60-164 46-154 (154)
56 3zx1_A Oxidoreductase, putativ 99.4 4.3E-12 1.5E-16 141.3 19.4 231 62-316 209-466 (481)
57 3t6v_A Laccase; beta barrel, o 99.4 2E-11 6.9E-16 136.7 22.2 245 64-316 168-456 (495)
58 1zpu_A Iron transport multicop 99.3 1.6E-11 5.6E-16 138.9 17.8 235 64-316 167-466 (534)
59 3pxl_A Laccase; 4-copper prote 99.3 4.8E-11 1.6E-15 133.6 21.2 243 64-315 166-455 (499)
60 1iby_A Nitrosocyanin; RED copp 99.3 3.1E-12 1.1E-16 114.3 8.7 92 59-165 20-112 (112)
61 3aw5_A Multicopper oxidase; be 99.3 3.6E-11 1.2E-15 133.3 19.0 214 61-315 166-433 (448)
62 1aoz_A Ascorbate oxidase; oxid 99.3 6.3E-11 2.2E-15 134.8 21.4 224 77-316 205-510 (552)
63 3od3_A Blue copper oxidase CUE 99.3 4E-11 1.4E-15 133.5 18.6 240 61-316 180-475 (488)
64 2q9o_A Laccase-1; multicopper 99.3 7.9E-11 2.7E-15 134.1 21.3 248 64-317 195-507 (559)
65 3tas_A Small laccase, multi-co 99.3 3.2E-11 1.1E-15 127.5 16.4 96 475-591 175-273 (313)
66 3cg8_A Laccase; oxidoreductase 99.3 5.5E-12 1.9E-16 134.9 9.4 101 67-170 198-311 (343)
67 1fwx_A Nitrous oxide reductase 99.2 2.7E-11 9.1E-16 136.6 11.6 94 60-166 497-593 (595)
68 2wsd_A Spore coat protein A; o 99.1 8.5E-10 2.9E-14 124.4 18.1 223 62-316 228-495 (513)
69 2g23_A PHS, phenoxazinone synt 99.1 2.6E-09 8.8E-14 122.0 21.7 238 62-316 252-576 (612)
70 3abg_A Bilirubin oxidase; clea 99.1 5.2E-10 1.8E-14 126.5 15.6 232 62-317 199-461 (534)
71 2ov0_A Amicyanin; beta-sandwic 99.1 3.1E-10 1.1E-14 100.0 10.8 83 66-164 23-105 (105)
72 3sqr_A Laccase; multicopper ox 99.0 1.3E-08 4.5E-13 115.5 23.1 245 65-315 226-528 (580)
73 3cvb_A Plastocyanin; cupredoxi 98.9 1.1E-09 3.7E-14 96.2 7.2 86 473-588 18-104 (105)
74 3gdc_A Multicopper oxidase; be 98.9 1.2E-09 4.3E-14 113.9 7.4 141 475-656 67-211 (288)
75 2aan_A Auracyanin A; cupredoxi 98.9 3.2E-09 1.1E-13 98.4 9.2 100 474-587 35-138 (139)
76 3t9w_A Small laccase, multi-co 98.9 4.7E-09 1.6E-13 110.0 11.0 102 67-170 179-292 (299)
77 2gim_A Plastocyanin; beta shee 98.9 3.1E-09 1.1E-13 93.5 8.1 82 75-164 19-105 (106)
78 2aan_A Auracyanin A; cupredoxi 98.8 2.2E-08 7.4E-13 92.7 11.7 91 72-164 31-139 (139)
79 3gyr_A PHS, phenoxazinone synt 98.8 2.5E-07 8.4E-12 106.6 20.5 238 61-317 251-577 (612)
80 4hci_A Cupredoxin 1; structura 98.6 5.5E-08 1.9E-12 84.6 7.8 85 64-164 16-100 (100)
81 2gim_A Plastocyanin; beta shee 98.6 1.4E-07 4.7E-12 82.8 9.0 86 473-588 19-105 (106)
82 1qhq_A Protein (auracyanin); e 98.6 4.1E-07 1.4E-11 84.2 12.4 93 72-165 29-140 (140)
83 2plt_A Plastocyanin; electron 98.6 6.6E-08 2.3E-12 83.6 6.1 80 76-164 18-98 (98)
84 1bxv_A Plastocyanin; copper pr 98.5 2E-07 6.7E-12 79.3 7.5 74 75-164 18-91 (91)
85 1pcs_A Plastocyanin; electron 98.5 2.7E-07 9.3E-12 79.7 8.4 81 75-164 18-98 (98)
86 3erx_A Pseudoazurin; copper pr 98.5 3.8E-07 1.3E-11 82.4 9.5 74 76-165 21-94 (123)
87 3tu6_A Pseudoazurin (blue copp 98.4 3.6E-07 1.2E-11 82.9 7.6 76 76-167 23-98 (127)
88 1qhq_A Protein (auracyanin); e 98.4 4.8E-07 1.7E-11 83.7 8.5 104 475-588 34-139 (140)
89 1b3i_A PETE protein, protein ( 98.4 4E-07 1.4E-11 78.5 7.4 77 76-164 19-97 (97)
90 1kdj_A Plastocyanin; electron 98.4 6.5E-07 2.2E-11 77.9 7.6 83 75-164 16-102 (102)
91 3ef4_A Pseudoazurin, blue copp 98.4 1.6E-06 5.6E-11 78.1 9.9 75 76-166 22-96 (124)
92 1byp_A Protein (plastocyanin); 98.3 1.4E-06 4.9E-11 75.2 9.2 77 76-164 17-99 (99)
93 1plc_A Plastocyanin; electron 98.3 1.6E-06 5.5E-11 75.0 9.1 77 76-164 17-99 (99)
94 1pcs_A Plastocyanin; electron 98.3 9E-07 3.1E-11 76.4 6.9 80 473-587 18-97 (98)
95 1bxv_A Plastocyanin; copper pr 98.2 5E-06 1.7E-10 70.5 9.3 73 473-587 18-90 (91)
96 1pmy_A Pseudoazurin; electron 98.2 4.3E-06 1.5E-10 75.5 9.1 75 76-166 21-95 (123)
97 2plt_A Plastocyanin; electron 98.2 3.9E-06 1.3E-10 72.3 8.5 81 473-587 17-97 (98)
98 1paz_A Pseudoazurin precursor; 98.2 4.8E-06 1.6E-10 75.2 9.0 76 75-166 20-95 (123)
99 1b3i_A PETE protein, protein ( 98.1 1.3E-06 4.5E-11 75.2 3.7 78 474-587 19-96 (97)
100 3c75_A Amicyanin; copper prote 98.1 1.3E-05 4.4E-10 73.3 10.4 79 70-164 54-132 (132)
101 1cuo_A Protein (azurin ISO-2); 98.1 2.2E-05 7.5E-10 71.3 11.3 93 72-165 14-129 (129)
102 1iby_A Nitrosocyanin; RED copp 98.1 1.2E-05 4.2E-10 71.1 9.4 74 474-588 38-111 (112)
103 1byp_A Protein (plastocyanin); 98.0 1.9E-05 6.6E-10 68.0 9.7 83 473-587 16-98 (99)
104 1iuz_A Plastocyanin; electron 98.0 9.7E-06 3.3E-10 69.9 7.0 78 75-164 17-98 (98)
105 3ay2_A Lipid modified azurin p 98.0 2.2E-05 7.7E-10 74.3 9.9 98 67-165 47-167 (167)
106 4hci_A Cupredoxin 1; structura 98.0 3.3E-05 1.1E-09 66.8 9.5 72 474-587 28-99 (100)
107 1kdj_A Plastocyanin; electron 97.9 2.7E-05 9.3E-10 67.5 8.1 86 473-587 16-101 (102)
108 1id2_A Amicyanin; beta barrel, 97.9 8E-05 2.7E-09 65.2 10.3 80 69-164 27-106 (106)
109 2ccw_A Azurin II, AZN-2; elect 97.8 0.00012 4E-09 66.5 10.8 92 72-164 14-128 (129)
110 2ux6_A Pseudoazurin; type-1 co 97.8 5.8E-05 2E-09 67.9 8.3 72 76-165 21-92 (122)
111 3sbq_A Nitrous-oxide reductase 97.7 0.00013 4.5E-09 80.8 11.8 94 59-165 539-637 (638)
112 1nwp_A Azurin; electron transp 97.7 0.0002 6.7E-09 64.9 10.4 91 72-164 14-128 (128)
113 2iaa_C Azurin; quinoprotein, t 97.7 0.00033 1.1E-08 63.4 11.6 91 72-164 13-127 (128)
114 1plc_A Plastocyanin; electron 97.7 0.00019 6.6E-09 61.7 9.4 83 473-587 16-98 (99)
115 1fwx_A Nitrous oxide reductase 97.6 0.0002 6.9E-09 80.8 10.7 78 473-589 512-592 (595)
116 2cal_A Rusticyanin; iron respi 97.4 0.00034 1.2E-08 65.5 8.7 91 474-587 61-153 (154)
117 2ov0_A Amicyanin; beta-sandwic 97.2 0.0012 4.2E-08 57.4 8.4 72 474-587 33-104 (105)
118 3fsa_A Azurin; copper, cupredo 96.8 0.0066 2.3E-07 54.2 9.9 89 72-164 14-125 (125)
119 2cua_A Protein (CUA); CUA cent 96.3 0.017 6E-07 52.5 9.7 73 76-165 60-135 (135)
120 1iuz_A Plastocyanin; electron 96.3 0.022 7.4E-07 48.6 9.8 81 473-587 17-97 (98)
121 3tu6_A Pseudoazurin (blue copp 96.3 0.0069 2.4E-07 54.6 6.7 37 550-590 61-97 (127)
122 3ef4_A Pseudoazurin, blue copp 96.3 0.0081 2.8E-07 53.9 6.9 75 474-590 22-96 (124)
123 3erx_A Pseudoazurin; copper pr 96.1 0.015 5.1E-07 52.1 7.8 36 550-589 59-94 (123)
124 3s8f_B Cytochrome C oxidase su 95.8 0.036 1.2E-06 52.3 9.4 85 65-164 82-167 (168)
125 1id2_A Amicyanin; beta barrel, 95.5 0.038 1.3E-06 47.9 7.9 72 474-587 34-105 (106)
126 3c75_A Amicyanin; copper prote 95.0 0.062 2.1E-06 48.6 7.9 72 474-587 60-131 (132)
127 1paz_A Pseudoazurin precursor; 94.4 0.067 2.3E-06 47.7 6.5 35 551-589 60-94 (123)
128 1pmy_A Pseudoazurin; electron 94.1 0.069 2.4E-06 47.7 5.9 36 550-589 59-94 (123)
129 3sbq_A Nitrous-oxide reductase 93.9 0.23 7.8E-06 55.3 10.6 79 473-588 557-636 (638)
130 1nwp_A Azurin; electron transp 93.0 0.15 5.3E-06 45.7 6.2 77 237-313 18-112 (128)
131 2cua_A Protein (CUA); CUA cent 92.9 0.41 1.4E-05 43.3 9.0 71 475-588 61-134 (135)
132 2ux6_A Pseudoazurin; type-1 co 91.9 0.24 8.1E-06 44.0 5.9 34 550-589 59-92 (122)
133 3ay2_A Lipid modified azurin p 89.0 0.85 2.9E-05 42.8 7.2 45 543-588 120-166 (167)
134 1cuo_A Protein (azurin ISO-2); 87.8 1.9 6.3E-05 38.6 8.4 102 474-588 18-128 (129)
135 3s8f_B Cytochrome C oxidase su 86.2 2.6 9E-05 39.4 8.8 73 475-588 94-167 (168)
136 3fsa_A Azurin; copper, cupredo 84.4 2.6 8.9E-05 37.4 7.4 101 473-588 17-125 (125)
137 2iaa_C Azurin; quinoprotein, t 80.7 5.4 0.00018 35.5 8.1 44 544-588 81-127 (128)
138 2ccw_A Azurin II, AZN-2; elect 78.8 6.3 0.00022 35.1 7.9 43 545-588 83-128 (129)
139 1cyx_A CYOA; electron transpor 70.4 13 0.00043 35.9 8.0 73 77-164 42-115 (205)
140 3isy_A Bsupi, intracellular pr 68.5 17 0.00058 31.9 7.8 71 243-315 16-101 (120)
141 2r39_A FIXG-related protein; s 66.5 11 0.00039 32.7 6.4 47 245-301 33-80 (118)
142 3hb3_B Cytochrome C oxidase su 55.6 24 0.00081 36.1 7.3 77 76-167 189-266 (298)
143 2gsm_B Cytochrome C oxidase su 51.7 22 0.00077 35.5 6.4 75 76-166 171-247 (262)
144 1v54_B Cytochrome C oxidase po 39.4 39 0.0013 33.0 5.8 75 76-166 140-216 (227)
145 2p9r_A Alpha-2-M, alpha-2-macr 37.4 38 0.0013 28.1 4.7 68 241-315 13-84 (102)
146 3isy_A Bsupi, intracellular pr 37.4 1.2E+02 0.0042 26.3 8.0 74 63-148 21-100 (120)
147 3rfr_A PMOB; membrane, oxidore 35.9 22 0.00076 37.3 3.4 41 114-156 101-143 (419)
148 1x9u_A Umecyanin; cupredoxin, 35.7 44 0.0015 28.9 4.9 36 133-168 72-108 (116)
149 3hb3_B Cytochrome C oxidase su 34.1 80 0.0027 32.1 7.3 76 473-589 188-264 (298)
150 1nep_A EPV20, BNPC2, epididyma 32.4 54 0.0019 28.8 5.1 69 67-137 18-94 (130)
151 1x9u_A Umecyanin; cupredoxin, 28.1 54 0.0018 28.4 4.2 34 558-591 73-107 (116)
152 1cyx_A CYOA; electron transpor 27.7 1.1E+02 0.0037 29.3 6.5 74 474-588 41-115 (205)
153 2x3c_A Toxic extracellular end 24.7 1.2E+02 0.0041 31.5 6.8 60 77-147 27-125 (343)
154 1gui_A Laminarinase 16A; carbo 24.3 3.6E+02 0.012 23.6 9.5 59 238-304 66-125 (155)
155 4ac7_B Urease subunit beta; hy 23.9 52 0.0018 28.8 3.1 27 77-104 18-47 (126)
156 4ubp_B Protein (urease (chain 23.9 52 0.0018 28.8 3.1 27 77-104 18-47 (126)
157 1fft_B Ubiquinol oxidase; elec 22.8 49 0.0017 34.0 3.3 73 77-164 152-225 (315)
158 1ws8_A Mavicyanin; oxidized fo 22.5 77 0.0026 27.0 4.0 45 124-168 63-107 (109)
159 4gio_A Putative lipoprotein; u 21.8 3.6E+02 0.012 22.7 8.3 68 473-564 27-94 (107)
160 1xwv_A DER F II; beta sheets, 20.9 48 0.0016 29.1 2.5 17 121-137 76-92 (129)
161 2gsm_B Cytochrome C oxidase su 20.7 1.8E+02 0.0062 28.8 7.0 76 473-589 170-246 (262)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=3.7e-99 Score=862.96 Aligned_cols=515 Identities=27% Similarity=0.482 Sum_probs=393.6
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceE
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSI 101 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~si 101 (695)
+++++|+|+|++.. +++||.++.+|+|||++|||+|+|++||+|+|+|+|+|..++++|
T Consensus 1 ~~~~~y~~~v~~~~---------------------~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsi 59 (552)
T 1aoz_A 1 SQIRHYKWEVEYMF---------------------WAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVI 59 (552)
T ss_dssp CCEEEEEEEEEEEE---------------------ECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCE
T ss_pred CeEEEEEEEEEEEE---------------------EcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeE
Confidence 47899999999853 578999999999999999999999999999999999996589999
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcCCCCceeEEEEeCCCCCCCCCCCCCCCCC
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLP 181 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~ 181 (695)
||||++|.+++||||+|++|||||+||++|+|+|+++++||||||||.+.|+++||+|+|||++++.. ..+|++|.
T Consensus 60 HwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~---~~~~~~d~- 135 (552)
T 1aoz_A 60 HWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGK---KEPFHYDG- 135 (552)
T ss_dssp EEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCTTC---CCSSCCSE-
T ss_pred EeCCCccCCCcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhccCeeeEEEeCCccc---CCCCCCCc-
Confidence 99999999999999999999999999999999999999999999999999999999999999987532 22356664
Q ss_pred ceEEEEeeecccchhhhhhcccCC--CCCCCCCeeeeCCCCCCcccC----------CCCC-cCCCCceeEEEecCcEEE
Q psy978 182 EHIMLITDWSHVLGVEMFNAHHHA--DGDNKPPTILMNGKGRFKEFR----------SNAT-VTYTPMEVFTVKQGHSYR 248 (695)
Q Consensus 182 e~~l~l~dw~~~~~~~~~~~~~~~--~~~~~~~~~lING~~~~~~~~----------~~~~-~~~~~~~~~~v~~G~~~r 248 (695)
|++|+|+||++++..+.+...... .....++++||||++.++|.. |... ....+.+.++|++|++||
T Consensus 136 e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~R 215 (552)
T 1aoz_A 136 EINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYR 215 (552)
T ss_dssp EEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEE
T ss_pred cceEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEE
Confidence 899999999998765544322111 112357899999998763310 0000 112234589999999999
Q ss_pred EEEEeCCCCCccEEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEEEEEEc-CCCCcceEEEEeeccCCCcccCCcc
Q psy978 249 FRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNA-THHVGNYWIKMRGLMDCDERFTSAY 327 (695)
Q Consensus 249 lRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a-~~~~g~Y~Ir~~~~~~~~~~~~~~~ 327 (695)
|||||++... .+.|+|+||+|+|||+||.+++|+.+++|.|+|||||||+|++ ++++|+|||++.... |.. ....
T Consensus 216 lRliNa~~~~-~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~~--~~~~ 291 (552)
T 1aoz_A 216 IRIASTTALA-ALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RHP--NTPP 291 (552)
T ss_dssp EEEEECCSSC-EEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SCC--CSCC
T ss_pred EEEEcccccc-eEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CCC--CCcc
Confidence 9999999886 7999999999999999999999999999999999999999999 566799999987654 321 2456
Q ss_pred eEEEEEEcCCCC-CCCCC-CccCCcccCCccccCCCCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEEeeeec
Q psy978 328 QTAVLRYEGAPD-ESPAG-EVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEI 405 (695)
Q Consensus 328 ~~ail~Y~~~~~-~~p~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~ 405 (695)
..|+|+|.++.. ..+.. .+.... .+. ....+...+..+..+. ....+..+|+++.+.+++...
T Consensus 292 ~~ail~y~~~~~~~~p~~~~p~~p~-------~~~-------~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~ 356 (552)
T 1aoz_A 292 GLTLLNYLPNSVSKLPTSPPPQTPA-------WDD-------FDRSKNFTYRITAAMG-SPKPPVKFNRRIFLLNTQNVI 356 (552)
T ss_dssp EEEEEEETTSCTTSCCSSCCCCCCC-------TTC-------HHHHHHHHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCc-------ccc-------ccccccccccccccCC-CCCCCCCCcEEEEEEEeeccC
Confidence 789999987653 11111 111000 000 0000001111111101 112345578888877665322
Q ss_pred CCCCcccccccccccccccccccccccCCccccCCCCccccccccCCccccccCC------------ccCCCCCCCcccc
Q psy978 406 DNPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNL------------TTDRCADSYCECT 473 (695)
Q Consensus 406 ~~~~~~~~~~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 473 (695)
+ ..+.|+|||++|..|+.|+|.+.+.-..+.|.... ....| ..+|.++
T Consensus 357 ~-------------------~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~t 416 (552)
T 1aoz_A 357 N-------------------GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTN-EKTRIGN 416 (552)
T ss_dssp T-------------------TEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCC-TTCEEEC
T ss_pred C-------------------CeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCcccccccccccccccc-ccccccc
Confidence 1 12368999999999999998764421112221100 00112 3567889
Q ss_pred eeeeeCCCCEEEEEEEeCCCCC---CCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeC
Q psy978 474 NVVNVPLESVVELIIIDEGVAY---DANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVP 550 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~---~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp 550 (695)
+++.++.|++|||+|+|.+... ...||||||||+||||+++. | .++. .....+|+.+|+|||||.||
T Consensus 417 ~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~-G-~~~~--------~~~~~~n~~~p~~RDTv~vp 486 (552)
T 1aoz_A 417 GVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD-G-KFSA--------EEESSLNLKNPPLRNTVVIF 486 (552)
T ss_dssp CCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEE-S-SCCG--------GGGGGSCCSSCCEESEEEEC
T ss_pred eEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEeccc-C-ccCc--------ccccccccCCCCccCeEEeC
Confidence 9999999999999999986322 45799999999999999863 2 3332 12346789999999999999
Q ss_pred CCCEEEEEEEecCceeeEEeecchhhhhcCceEEEEeccCCCCCCCCCCCCCCCCCCCCCC
Q psy978 551 DGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEHEDMAPVPKDFPTCGDYYNVDS 611 (695)
Q Consensus 551 ~~G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~~~~~~~~P~~~p~Cg~~~~~~~ 611 (695)
++||++|||+|||||.|||||||+||++.|||++|.|+.+ +++++|+++|+||++.+...
T Consensus 487 p~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-~~~~~P~~~~~C~~~~~~~~ 546 (552)
T 1aoz_A 487 PYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-KVGRIPTKALACGGTAKSLI 546 (552)
T ss_dssp TTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-GCCCCCHHHHSSHHHHHHHS
T ss_pred CCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-hhccCCcchhhhhccCcccc
Confidence 9999999999999999999999999999999999999876 78889999999999875443
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=3.4e-97 Score=841.47 Aligned_cols=492 Identities=31% Similarity=0.479 Sum_probs=376.9
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceE
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSI 101 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~si 101 (695)
+++++|+|+|++.. +++||++|.+|+|||++|||+|+|++||+|+|+|+|+|..++++|
T Consensus 65 ~~~~~~~l~v~~~~---------------------~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsI 123 (580)
T 3sqr_A 65 GVTREYWLSVENST---------------------ITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSI 123 (580)
T ss_dssp CCEEEEEEEEEEEE---------------------ECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCE
T ss_pred ceEEEEEEEEEEEE---------------------ecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceE
Confidence 45677888887743 478999999999999999999999999999999999996689999
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcCCCCceeEEEEeCCCCCCCCCCCCCCCCC
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLP 181 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~ 181 (695)
||||++|.+++||||+|++|||||+||++|+|+|+++|+||||||||.+.|+++||+|+|||+++... .||.|
T Consensus 124 HwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d-- 196 (580)
T 3sqr_A 124 HWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDED-- 196 (580)
T ss_dssp EETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEE--
T ss_pred EecccccCCCccccCCCccccCCCCCCCeEEEEEECCCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCcc--
Confidence 99999999999999999999999999999999999999999999999999999999999999987532 35554
Q ss_pred ceEEEEeeecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCC--CCCcCCCCceeEEEecCcEEEEEEEeCCCCCc
Q psy978 182 EHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRS--NATVTYTPMEVFTVKQGHSYRFRIINAGYLNC 259 (695)
Q Consensus 182 e~~l~l~dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~--~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~ 259 (695)
..+|+|+||+++...+.+.... ..+...++++||||++.++|... .......+.+.+.|++|++|||||||++...
T Consensus 197 ~~~l~l~Dw~~~~~~~~~~~~~-~~~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~- 274 (580)
T 3sqr_A 197 VGVIFLQDWAHESVFEIWDTAR-LGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDS- 274 (580)
T ss_dssp EEEEEEEEECSSCHHHHHHHHT-TSCCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSC-
T ss_pred ceEEEEEEEecCCHHHHHHHHh-ccCCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCc-
Confidence 2489999999998765544322 23467889999999987643110 0111233457999999999999999999987
Q ss_pred cEEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEEEEcCCCC
Q psy978 260 PIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPD 339 (695)
Q Consensus 260 ~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y~~~~~ 339 (695)
.+.|+|+||+|+|||+||.+++|+.+++|.|+|||||||+|++++++|+||||+....+|...+......|||+|.+++.
T Consensus 275 ~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~ 354 (580)
T 3sqr_A 275 HFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSI 354 (580)
T ss_dssp CEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCC
T ss_pred eeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCC
Confidence 79999999999999999999999999999999999999999999999999999988777753233446799999987654
Q ss_pred CCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEEeeeecCCCCcccccccccc
Q psy978 340 ESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGFD 419 (695)
Q Consensus 340 ~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~g~~ 419 (695)
..|...+ +.. ...|... ....|.++. ...++...+.++.+.++.
T Consensus 355 ~~P~~~~-~~~-----------~~~~~~~---~~~~L~P~~----~~~~~~~~~~~~~l~~~~----------------- 398 (580)
T 3sqr_A 355 ANPTSVG-TTP-----------RGTCEDE---PVASLVPHL----ALDVGGYSLVDEQVSSAF----------------- 398 (580)
T ss_dssp CCCCCCC-CCC-----------CCCSCCS---CGGGCCBSS----CCBCCSEEEEEEEEEEEE-----------------
T ss_pred CCCCCCC-CCc-----------cchhhcc---cccccccCC----CCCCCCccceEEEEEecc-----------------
Confidence 3333221 111 0011111 112232221 112223334444433320
Q ss_pred cccccccccccccCCccccC-CCCccccccccCCccccccCCccCCCCCCCcccceeeeeC----CCCEEEEEEEeCCCC
Q psy978 420 EVKRLEKVRTPQLNHLSFRF-PTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVP----LESVVELIIIDEGVA 494 (695)
Q Consensus 420 ~~~~~~~~~~~~iN~~s~~~-P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----~g~vVeivl~N~~~~ 494 (695)
+..+.|+|||++|.. |+.|+|.+.+. + ...+....+++.++ .|++|||+|+|.+..
T Consensus 399 -----~~~~~w~iN~~s~~~~~~~P~L~~~~~--g------------~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 399 -----TNYFTWTINSSSLLLDWSSPTTLKIFN--N------------ETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp -----SSSEEEEETTBCCCCCTTSCHHHHHHT--T------------CCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred -----CCceeEEECCEecccCCCCCchhhhhc--C------------CccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 123478999999975 68898865432 1 01222335566665 699999999997622
Q ss_pred CCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEeecch
Q psy978 495 YDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIE 574 (695)
Q Consensus 495 ~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~AdNPG~Wl~HCHi~ 574 (695)
...||||||||+||||++|. | +++.+ .+...+|+.+|++|||+.||++||++|||+|||||.|+|||||+
T Consensus 460 -~~~HP~HLHGh~F~vv~~g~-G-~f~~~-------~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~ 529 (580)
T 3sqr_A 460 -GIWHPIHLHGHDFFIVAQET-D-VFNSD-------ESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIA 529 (580)
T ss_dssp -CCCEEEEESSCCEEEEEEES-S-CCCTT-------TSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSH
T ss_pred -ccceeeEecCceEEEEecCC-C-ccCcc-------ccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcH
Confidence 46899999999999999873 2 44421 23356899999999999999999999999999999999999999
Q ss_pred hhhhcCceEEEEeccCCC--CCCCCCCC-CCCCCCCC
Q psy978 575 FHVETGMALVFKVGEHED--MAPVPKDF-PTCGDYYN 608 (695)
Q Consensus 575 ~H~~~GM~~v~~V~~~~~--~~~~P~~~-p~Cg~~~~ 608 (695)
||+++||+++|.|+.++- +.++|+++ ..|..|..
T Consensus 530 ~H~~~Gm~~~~~e~~~~i~~~~~~~~~~~~~C~~~~~ 566 (580)
T 3sqr_A 530 WHASEGLAMQFVESQSSIAVKMTDTAIFEDTCANWNA 566 (580)
T ss_dssp HHHHTTCEEEEEESGGGCCCCHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCcEEEEECHHHHhhccCCcHHHHHhhHHHhh
Confidence 999999999999976432 11245554 46987744
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1e-96 Score=828.02 Aligned_cols=479 Identities=32% Similarity=0.564 Sum_probs=372.3
Q ss_pred EEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCC----CCce
Q psy978 25 CTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLME----ESTS 100 (695)
Q Consensus 25 ~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~----~~~s 100 (695)
..|+|+|++.. +++||++|.+|+|||++|||+|+|++||+|+|+|+|+|.. ++++
T Consensus 4 ~~~~l~v~~~~---------------------~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~ts 62 (499)
T 3pxl_A 4 PVADLTITDAA---------------------VSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTS 62 (499)
T ss_dssp SEEEEEEEEEE---------------------ECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBC
T ss_pred ceEEEEEEEEE---------------------EcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceE
Confidence 46999999853 5889999999999999999999999999999999999964 5899
Q ss_pred EeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEc-CCCeeeEEEccccCcCCCCceeEEEEeCCCCCCCCCCCCCCC
Q psy978 101 IHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFD 179 (695)
Q Consensus 101 iH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d 179 (695)
|||||++|++++||||+|++|||||+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+ |...+|+.|
T Consensus 63 iHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~--~~~~~~~~d 140 (499)
T 3pxl_A 63 IHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPND--PHASRYDVD 140 (499)
T ss_dssp EEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTC--TTGGGCSBC
T ss_pred EEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcc--cccccCCCC
Confidence 9999999999999999999999999999999999999 7899999999999999999999999998763 444567777
Q ss_pred CCceEEEEeeecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCc
Q psy978 180 LPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNC 259 (695)
Q Consensus 180 ~~e~~l~l~dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~ 259 (695)
..|++|+|+||+++.... ....+..++++||||++++.+ . ...+.+.++|++|++|||||||++...
T Consensus 141 ~~~~~l~l~Dw~~~~~~~------~~~~p~~~d~~liNG~~~~~~--~----~~~~~~~~~v~~G~~~RlRliNa~~~~- 207 (499)
T 3pxl_A 141 NDDTVITLADWYHTAAKL------GPRFPGGADATLINGKGRAPS--D----SVAELSVIKVTKGKRYRFRLVSLSCNP- 207 (499)
T ss_dssp SGGGEEEEEEECSSCTTT------SCSSCSSCSEEEETTBCCCTT--C----TTCCCCEEEECTTCEEEEEEEECCSSC-
T ss_pred CceEEEEEEcccCCcccc------ccCCCCCCcEEEECCCCcCCC--C----CCCCcceEEEcCCCEEEEEEEecCCCe-
Confidence 657899999999986532 112234789999999987632 1 123446899999999999999999887
Q ss_pred cEEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEEEEcCCCC
Q psy978 260 PIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPD 339 (695)
Q Consensus 260 ~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y~~~~~ 339 (695)
.+.|+|+||+|+|||+||.+++|+.+++|.|+|||||||+|+++++.|+|||++.....+.. +......|||+|.+++.
T Consensus 208 ~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~ 286 (499)
T 3pxl_A 208 NHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVG-FDGGINSAILRYDGAPA 286 (499)
T ss_dssp CEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCS-CGGGTTEEEEEETTSCS
T ss_pred eEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEecccCccc-cCCCceEEEEEeCCCCC
Confidence 79999999999999999999999999999999999999999999988999999876544432 22344689999988654
Q ss_pred CCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCC-CCCCccccCCceEEEEEEeeeecCCCCccccccccc
Q psy978 340 ESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSA-SSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGF 418 (695)
Q Consensus 340 ~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~g~ 418 (695)
..|..... .. ..++ ...+|.++.+. .........+|.++.+.+.+..
T Consensus 287 ~~p~~~~~-~~-------~~~~----------~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~~-------------- 334 (499)
T 3pxl_A 287 VEPTTNQT-TS-------VKPL----------NEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFNG-------------- 334 (499)
T ss_dssp SCCCCCCC-CC-------SSBC----------CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEECS--------------
T ss_pred CCCCCCCC-CC-------Cccc----------ccccccccccccCCCcccCCCCcEEEEEEEEecC--------------
Confidence 33321100 00 0000 01123332211 1111233456777766654311
Q ss_pred ccccccccccccccCCccccCCCCccccccccCCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeCCCCCCCC
Q psy978 419 DEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVAYDAN 498 (695)
Q Consensus 419 ~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~~~~~ 498 (695)
..|+|||++|..|+.|+|.+...- .+. .........++.++.|++|||+|+|.+......
T Consensus 335 ---------~~w~iNg~s~~~~~~P~L~~~~~g---~~~--------~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~ 394 (499)
T 3pxl_A 335 ---------SNFFINGASFVPPTVPVLLQILSG---AQT--------AQDLLPSGSVYVLPSNASIEISFPATAAAPGAP 394 (499)
T ss_dssp ---------SCEEETTBCCCCCSSCHHHHHHTT---CCS--------TTTSSSTTSEEEECTTCEEEEEEECCTTSCSCS
T ss_pred ---------cEEEEcCEecCCCCCchhhhhhcC---Ccc--------ccccCCCceeEEecCCCEEEEEEecCcccCCCC
Confidence 157899999999999988764321 000 011122356899999999999999533223568
Q ss_pred CceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCC---CCEEEEEEEecCceeeEEeecchh
Q psy978 499 HPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPD---GGFTIIRFHATNPGYWLFHCHIEF 575 (695)
Q Consensus 499 HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~---~G~~vIRF~AdNPG~Wl~HCHi~~ 575 (695)
||||||||+||||+.+ | ...+|+.+|+||||+.||+ +||++|||+|||||.|+|||||+|
T Consensus 395 HP~HLHGh~F~Vl~~~--g---------------~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~ 457 (499)
T 3pxl_A 395 HPFHLHGHTFAVVRSA--G---------------STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDF 457 (499)
T ss_dssp CEEEETTCCEEEEECT--T---------------CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHH
T ss_pred ccceecCCcEEEEecc--C---------------CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChh
Confidence 9999999999999753 2 2357889999999999997 999999999999999999999999
Q ss_pred hhhcCceEEEEeccCCC--CCCCCCCC-CCCCCCCCC
Q psy978 576 HVETGMALVFKVGEHED--MAPVPKDF-PTCGDYYNV 609 (695)
Q Consensus 576 H~~~GM~~v~~V~~~~~--~~~~P~~~-p~Cg~~~~~ 609 (695)
|+++||+++|.++.++- ..++|+++ ..|..|...
T Consensus 458 H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~~~~ 494 (499)
T 3pxl_A 458 HLEGGFAVVMAEDTPDVKAVNPVPQAWSDLCPTYDAL 494 (499)
T ss_dssp HHHTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHHTS
T ss_pred HhhCCCcEEEEEChhHhccccCCCHHHHHhhhHhhcc
Confidence 99999999998876432 23456554 579888554
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.4e-96 Score=826.94 Aligned_cols=476 Identities=33% Similarity=0.577 Sum_probs=369.6
Q ss_pred EEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCC----CCceE
Q psy978 26 TYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLME----ESTSI 101 (695)
Q Consensus 26 ~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~----~~~si 101 (695)
.|+|+|++.. +++||++|.+|+|||++|||+|+|++||+|+|+|+|+|.. ++++|
T Consensus 6 ~~~l~i~~~~---------------------~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsi 64 (495)
T 3t6v_A 6 VTDLHIVNAD---------------------IVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSI 64 (495)
T ss_dssp EEEEEEEEEE---------------------ECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCE
T ss_pred eEEEEEEEEE---------------------EcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEE
Confidence 5899999853 5889999999999999999999999999999999999964 48999
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEc-CCCeeeEEEccccCcCCCCceeEEEEeCCCCCCCCCCCCCCCC
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDL 180 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~ 180 (695)
||||++|++++||||+|++|||||+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+ |...+|+.|.
T Consensus 65 HwHGl~~~~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~--~~~~~~~~d~ 142 (495)
T 3t6v_A 65 HWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPND--PDANLYDVDD 142 (495)
T ss_dssp EEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC--TTGGGCSBCS
T ss_pred EeCCcccCCCccccCCCccccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccc--cccccCCCCC
Confidence 999999999999999999999999999999999999 7899999999999999999999999998763 4445677776
Q ss_pred CceEEEEeeecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCcc
Q psy978 181 PEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCP 260 (695)
Q Consensus 181 ~e~~l~l~dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~ 260 (695)
.|++|+|+||+++..... ....+..++++||||++++.+ .. ...+.+.++|++|++|||||||++... .
T Consensus 143 ~e~~l~l~Dw~~~~~~~~-----~~~~p~~~d~~liNG~g~~~~--~~---~~~~~~~~~v~~G~~~RlRliN~~~~~-~ 211 (495)
T 3t6v_A 143 DTTIITLADWYHVLAKEM-----GAGGAITADSTLIDGLGRTHV--NV---AAVPLSVITVEVGKRYRMRLVSISCDP-N 211 (495)
T ss_dssp GGGEEEEEEECSSCGGGS-----CSSSCCCCSEEEETTBCCBSS--SC---CCCCCCEEEECTTCEEEEEEEECCSSC-C
T ss_pred ceeEEEEecccCCchhhh-----ccCCCCCCcEEEECCcCcCCC--Cc---ccCCceEEEEcCCCEEEEEEEecCCCe-e
Confidence 578999999999875432 112234789999999987632 11 023456899999999999999999886 7
Q ss_pred EEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEEEEcCCCCC
Q psy978 261 IELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDE 340 (695)
Q Consensus 261 ~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y~~~~~~ 340 (695)
+.|+|+||+|+|||+||.+++|+.+++|.|+|||||||+|+++++.|+||||+.....+.. +......|||+|.+++..
T Consensus 212 ~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~ 290 (495)
T 3t6v_A 212 YDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEG-FDGGINSAILRYDGATTA 290 (495)
T ss_dssp EEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCS-CGGGTTEEEEEETTSCSS
T ss_pred EEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEecccCccc-cCCCceEEEEEECCCCCC
Confidence 9999999999999999999999999999999999999999999988999999976544432 223345899999876543
Q ss_pred CCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCC-CCCCccccCCceEEEEEEeeeecCCCCcccccccccc
Q psy978 341 SPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSA-SSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGFD 419 (695)
Q Consensus 341 ~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~g~~ 419 (695)
.|..... . ....++ ...+|.++.+. .........+|.++.+.+++..
T Consensus 291 ~p~~~~~-~------~~~~~~----------~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~~--------------- 338 (495)
T 3t6v_A 291 DPVTVAS-T------VHTKCL----------IETDLHPLSRNGVPGNPHQGGADCNLNLSLGFAC--------------- 338 (495)
T ss_dssp CCCCCCC-S------SCSSBC----------CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEET---------------
T ss_pred CCCCCCC-C------CCcccc----------ccccccccccccCCCccCCCCCcEEEEEEEEecC---------------
Confidence 3321100 0 000000 01123333211 1111223456777766554311
Q ss_pred cccccccccccccCCccccCCCCccccccccCCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEe-CCCCCCCC
Q psy978 420 EVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIID-EGVAYDAN 498 (695)
Q Consensus 420 ~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N-~~~~~~~~ 498 (695)
..|+|||++|..|+.|+|.+... + .+. .........++.++.|++|||+|+| .. ...
T Consensus 339 --------~~w~iNg~s~~~~~~P~L~~~~~--g-~~~--------~~~~~~~~~v~~~~~g~~V~ivl~~n~~---~~~ 396 (495)
T 3t6v_A 339 --------GNFVINGVSFTPPTVPVLLQICS--G-ANT--------AADLLPSGSVISLPSNSTIEIALPAGAA---GGP 396 (495)
T ss_dssp --------TEEEETTBCCCCCSSCHHHHHHT--T-CCS--------STTSSSTTSEEEECTTCEEEEEEECCSS---SCC
T ss_pred --------cEEEEcCEecCCCCCcchhhhhc--C-CcC--------cccccCCcceEEecCCCEEEEEEccCCC---CCC
Confidence 15789999999999998876432 1 000 0112224568999999999999984 33 568
Q ss_pred CceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCC-CCEEEEEEEecCceeeEEeecchhhh
Q psy978 499 HPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPD-GGFTIIRFHATNPGYWLFHCHIEFHV 577 (695)
Q Consensus 499 HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~-~G~~vIRF~AdNPG~Wl~HCHi~~H~ 577 (695)
||||||||+||||+.+ | ...+|+.+|+|||||.||+ |||++|||+|||||.|||||||+||+
T Consensus 397 HP~HLHGh~F~vl~~~--g---------------~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~ 459 (495)
T 3t6v_A 397 HPFHLHGHDFAVSESA--S---------------NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHL 459 (495)
T ss_dssp CEEEETTCCEEEEECT--T---------------CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHH
T ss_pred cceeecCCcEEEEecC--C---------------CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHh
Confidence 9999999999999753 2 2357889999999999997 89999999999999999999999999
Q ss_pred hcCceEEEEeccCC--CCCCCCCCC-CCCCCCC
Q psy978 578 ETGMALVFKVGEHE--DMAPVPKDF-PTCGDYY 607 (695)
Q Consensus 578 ~~GM~~v~~V~~~~--~~~~~P~~~-p~Cg~~~ 607 (695)
++||+++|.++.++ +..++|+++ ..|..|.
T Consensus 460 ~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 460 DAGFAIVFAEDIPNTASANPVPEAWSNLCPSYD 492 (495)
T ss_dssp HTTCEEEEEETHHHHHHHCCCCHHHHHHHHHHH
T ss_pred hcCCeEEEEEChhHhccccCCCHHHHHHhhHhh
Confidence 99999999987642 123456554 4687663
No 5
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-96 Score=833.09 Aligned_cols=512 Identities=26% Similarity=0.444 Sum_probs=386.9
Q ss_pred ceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCC-ceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceE
Q psy978 23 RTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADG-VKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSI 101 (695)
Q Consensus 23 ~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG-~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~si 101 (695)
++++|+|+|++.. +++|| ++|.+|+|||++|||+|+|++||+|+|+|+|+|..++++|
T Consensus 1 ~~~~~~~~v~~~~---------------------~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsi 59 (534)
T 1zpu_A 1 ETHTFNWTTGWDY---------------------RNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSM 59 (534)
T ss_dssp CEEEEEEEEEEEE---------------------ECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCC
T ss_pred CEEEEEEEEEEEE---------------------ecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeE
Confidence 4789999999853 47899 7999999999999999999999999999999996599999
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcC-CCeeeEEEccccCcCCCCceeEEEEeCCCCCCCCCCCCCCCC
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNAD-SPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDL 180 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~-~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~ 180 (695)
||||++|.+++||||+|++|||||+||++|+|+|++. ++||||||||.+.|+.+||+|+|||+++.. | +++|.
T Consensus 60 HwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--p----~~~d~ 133 (534)
T 1zpu_A 60 HFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF--P----YDYDE 133 (534)
T ss_dssp EEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC--C----SCCSE
T ss_pred EcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC--C----CCCcc
Confidence 9999999999999999999999999999999999998 999999999999999999999999998753 3 24454
Q ss_pred CceEEEEeeecccchhhhhhc---ccCC-CCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCC
Q psy978 181 PEHIMLITDWSHVLGVEMFNA---HHHA-DGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGY 256 (695)
Q Consensus 181 ~e~~l~l~dw~~~~~~~~~~~---~~~~-~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~ 256 (695)
|++|+|+||+++...+.+.. .... .....++++||||+..+ .++|++|++|||||||++.
T Consensus 134 -e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~~~---------------~~~v~~g~~~RlRliNa~~ 197 (534)
T 1zpu_A 134 -ELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMNL---------------TWEVQPDTTYLLRIVNVGG 197 (534)
T ss_dssp -EEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBSSC---------------EEECCSSCEEEEEEEECCS
T ss_pred -eEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCCce---------------EEEEECCCEEEEEEEeccC
Confidence 79999999999876554322 1111 22357899999999653 8999999999999999999
Q ss_pred CCccEEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEEEEEEcCCC-CcceEEEEeeccCCCc---ccCCcceEEEE
Q psy978 257 LNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHH-VGNYWIKMRGLMDCDE---RFTSAYQTAVL 332 (695)
Q Consensus 257 ~~~~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~-~g~Y~Ir~~~~~~~~~---~~~~~~~~ail 332 (695)
.. .+.|+|+||+|+|||+||.+++|..++.|.|+|||||||+|++++. .++|||++.....+.. ........|+|
T Consensus 198 ~~-~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail 276 (534)
T 1zpu_A 198 FV-SQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYM 276 (534)
T ss_dssp SC-CEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEE
T ss_pred Cc-eEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEE
Confidence 87 7999999999999999999999999999999999999999999864 5799999865433211 01134567999
Q ss_pred EEcCCCCCCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEEeeeecCCCCccc
Q psy978 333 RYEGAPDESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHL 412 (695)
Q Consensus 333 ~Y~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 412 (695)
+|.++... +.. .... .+.+ +. +. ..+.++. ...++..+|+++.+.+.+....+
T Consensus 277 ~y~~~~~~-p~~-~~~~-------~~~~----~~--~~---~~l~p~~----~~~~~~~~~~~~~l~~~~~~~~~----- 329 (534)
T 1zpu_A 277 VYNKTAAL-PTQ-NYVD-------SIDN----FL--DD---FYLQPYE----KEAIYGEPDHVITVDVVMDNLKN----- 329 (534)
T ss_dssp ESCTTSCB-CCC-CCCS-------CSSC----SC--CG---GGCCBSS----CCCCCCSCSEEEEEEEEEEECTT-----
T ss_pred EeCCCCCC-CCC-Cccc-------cccc----cc--cc---ccceeCC----CCCCCCCCCeEEEEEEEeeccCC-----
Confidence 99875421 110 0000 0000 00 00 1122221 11233567788877776542111
Q ss_pred ccccccccccccccccccccCCccccCCCCccccccccCCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeCC
Q psy978 413 STLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEG 492 (695)
Q Consensus 413 ~~~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~ 492 (695)
+ ...|.|||++|..|+.|+|.+.... +.+... ...++.+++++.++.|++|||+|+|.+
T Consensus 330 ------------~-~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~~~------~~~~~~~~~~~~~~~g~~v~ivi~N~~ 388 (534)
T 1zpu_A 330 ------------G-VNYAFFNNITYTAPKVPTLMTVLSS--GDQANN------SEIYGSNTHTFILEKDEIVEIVLNNQD 388 (534)
T ss_dssp ------------S-CEEEEETTBCCCCCSSCHHHHHTTS--GGGTTC------GGGGCSSSCEEEECTTCEEEEEEEECS
T ss_pred ------------c-eeEEEECCCcccCCCCCceeeeccc--CcccCC------CcccCCCceEEEeCCCCEEEEEEeCCC
Confidence 0 1146899999999999988765331 122111 123344578899999999999999986
Q ss_pred CCCCCCCceeecCCCeEEEEEccc------CccccccchhcccccccccCCCCCCCccceeEeCCCCEEEEEEEecCcee
Q psy978 493 VAYDANHPFHLHGHPFRVVAMERV------AKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGY 566 (695)
Q Consensus 493 ~~~~~~HPfHLHG~~F~Vv~~g~~------g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~AdNPG~ 566 (695)
.+.||||||||+||||+++.. |.+..+ +... ...+..+|+|||||.||++||++|||+|||||.
T Consensus 389 ---~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~------~~~~-~~~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~ 458 (534)
T 1zpu_A 389 ---TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSF------DPDN-HPAFPEYPMRRDTLYVRPQSNFVIRFKADNPGV 458 (534)
T ss_dssp ---SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCC------BTTB-CCCCCSSCEEESEEEECTTCEEEEEEECCSCEE
T ss_pred ---CCCCCeEecCCceEEEeecCCccccccCccccc------Cccc-cccccCCCCeeeEEEeCCCCEEEEEEEeCCCee
Confidence 578999999999999998742 111111 1111 112356899999999999999999999999999
Q ss_pred eEEeecchhhhhcCceEEEEeccCCC--C--CCCCCC-CCCCCCCCCCCCCCccccccccccceeeeeeecccccceeec
Q psy978 567 WLFHCHIEFHVETGMALVFKVGEHED--M--APVPKD-FPTCGDYYNVDSVEDEDNEIGEIGEKKEVTTQGSVAGDEIIP 641 (695)
Q Consensus 567 Wl~HCHi~~H~~~GM~~v~~V~~~~~--~--~~~P~~-~p~Cg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (695)
|||||||+||+++|||++|.|..++. . .++|++ .+.|..|. +...||+.|+....
T Consensus 459 W~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~p~~~~~~C~~~~--------------------~~~~~n~~g~~~~~ 518 (534)
T 1zpu_A 459 WFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQLSENHLEVCQSCS--------------------VATEGNAAANTLDL 518 (534)
T ss_dssp EEEEECCHHHHHTTCEEEEEECHHHHHHCGGGSCCHHHHHHHHHTT--------------------CCCSSSSSCSSSCC
T ss_pred EEEEeCchhHhhcCCeEEEEECccccccccccCCChhHhhhhhccC--------------------CCCCCcccccccCc
Confidence 99999999999999999999865321 1 233443 45776662 22457777777666
Q ss_pred cccccccceeeccccC
Q psy978 642 GSDDLDKKVQYEVMPT 657 (695)
Q Consensus 642 ~~~~~~~~~~~~~~~~ 657 (695)
++|.|+++|++.||.
T Consensus 519 -~~~~~~~~~~~~~~~ 533 (534)
T 1zpu_A 519 -TDLTGENVQHAFIPT 533 (534)
T ss_dssp -CCCCCCCCCCC----
T ss_pred -ccCCCCccCCCCCCC
Confidence 699999999999884
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.2e-93 Score=808.90 Aligned_cols=484 Identities=30% Similarity=0.543 Sum_probs=371.2
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCc-eEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCC----
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGV-KRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLME---- 96 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~-~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~---- 96 (695)
+...+|+|+|++.. +++||+ ++.+|+|||++|||+|+|++||+|+|+|+|+|.+
T Consensus 21 ~~~~~~~l~i~~~~---------------------~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~ 79 (521)
T 1v10_A 21 AATVALDLHILNAN---------------------LDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMR 79 (521)
T ss_dssp -CCSEEEEEEEEEE---------------------ECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSC
T ss_pred ccCceEEEEEEEEE---------------------EcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCC
Confidence 56778999998853 578999 9999999999999999999999999999999953
Q ss_pred CCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEE-cCCCeeeEEEccccCcCCCCceeEEEEeCCCCCCCCCCC
Q psy978 97 ESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFN-ADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPL 175 (695)
Q Consensus 97 ~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~-~~~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~p~~~~ 175 (695)
++++|||||++|.+++||||+|++|||||+||++|+|+|+ ++++||||||||.+.|+++||+|+|||+++. ++....
T Consensus 80 ~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~--~~~~~~ 157 (521)
T 1v10_A 80 RATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN--DPHLSL 157 (521)
T ss_dssp CCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGG
T ss_pred CCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCc--cccccc
Confidence 8999999999999999999999999999999999999999 5889999999999999999999999999875 343445
Q ss_pred CCCCCCceEEEEeeecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCC
Q psy978 176 YDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAG 255 (695)
Q Consensus 176 ~d~d~~e~~l~l~dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~ 255 (695)
|+.|..|++|+|+||+++...+.... .......++++||||++.+.+ .. ...+.+.++|++|++|||||||++
T Consensus 158 ~~~d~~e~~l~l~D~~~~~~~~~~~~--~~~~~~~~d~~liNG~~~~~~---~~--~~~~~~~~~v~~G~~~RlRliNa~ 230 (521)
T 1v10_A 158 YDVDDASTVITIADWYHSLSTVLFPN--PNKAPPAPDTTLINGLGRNSA---NP--SAGQLAVVSVQSGKRYRFRIVSTS 230 (521)
T ss_dssp CSBCSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCSS---CG--GGSCCCEEEECTTCEEEEEEEECC
T ss_pred CCCCCceeEEEEcccccCCHHHHhhc--cCCCCCCCCEEEECCcccCCC---CC--CCCCceEEEECCCCEEEEEEEecC
Confidence 77664589999999999876544321 112245689999999987532 10 112346899999999999999999
Q ss_pred CCCccEEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEEEEc
Q psy978 256 YLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYE 335 (695)
Q Consensus 256 ~~~~~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y~ 335 (695)
... .+.|+|+||+|+||++||.+++|+.+++|.|+|||||||+|++++++|+|||++.....+.. +......|+|+|.
T Consensus 231 ~~~-~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~-~~~~~~~ail~y~ 308 (521)
T 1v10_A 231 CFP-NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNG-FTGGINSAIFRYQ 308 (521)
T ss_dssp SSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCS-CGGGTTEEEEEET
T ss_pred Ccc-cEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeecccccccc-CCCCceeEEEEEC
Confidence 987 79999999999999999999999999999999999999999999888999999876543321 2223347999999
Q ss_pred CCCCCCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCC-CCCCccccCCceEEEEEEeeeecCCCCccccc
Q psy978 336 GAPDESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSA-SSDVRLQDRANLTFYISYDFYEIDNPHFHLST 414 (695)
Q Consensus 336 ~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~ 414 (695)
+++...|...+. . ..++. ..+|.++.+. ..........+.++.+++.+.
T Consensus 309 ~~~~~~p~~~~~--~-------~~~~~----------~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~----------- 358 (521)
T 1v10_A 309 GAAVAEPTTSQN--S-------GTALN----------EANLIPLINPGAPGNPVPGGADINLNLRIGRN----------- 358 (521)
T ss_dssp TCCSCCCCCCCC--C-------SCBCC----------GGGCCBSSCCCCSSCSSTTCSSEEEECCEECC-----------
T ss_pred CCCCCCCCCCCC--c-------ccccc----------hhhcccCCcccCCCcccCCcceEEEEEEEecC-----------
Confidence 765432321110 0 00010 0112222110 001111224555554443221
Q ss_pred ccccccccccccccccccCCccccCCCCccccccccCCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeCCCC
Q psy978 415 LYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVA 494 (695)
Q Consensus 415 ~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~ 494 (695)
+..+.|+|||++|..|..|+|.+...- .+. ...++.+++++.++.|++|||+|+| .
T Consensus 359 ----------~~~~~~~iNg~~~~~~~~P~l~~~~~g---~~~--------~~~~~~~~~~~~v~~g~~vei~l~N-~-- 414 (521)
T 1v10_A 359 ----------ATTADFTINGAPFIPPTVPVLLQILSG---VTN--------PNDLLPGGAVISLPANQVIEISIPG-G-- 414 (521)
T ss_dssp ----------SSSSCCEESSCCCCCCSSCHHHHHHHT---CCC--------GGGSSSTTTEEEECTTCEEEEEEEC-C--
T ss_pred ----------CceeEEEECCCcccCCCCchhhhhhcC---Ccc--------cccCCCCceEEEecCCCEEEEEEcC-C--
Confidence 111357899999999988988664321 000 1123446788999999999999999 3
Q ss_pred CCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEe-CCCCEEEEEEEecCceeeEEeecc
Q psy978 495 YDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTV-PDGGFTIIRFHATNPGYWLFHCHI 573 (695)
Q Consensus 495 ~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~V-p~~G~~vIRF~AdNPG~Wl~HCHi 573 (695)
+.||||||||+||||+++. + ..+|+.+|+|||||.| |++||++|||+|||||.|||||||
T Consensus 415 --~~HP~HLHGh~F~Vl~~~~-~----------------~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi 475 (521)
T 1v10_A 415 --GNHPFHLHGHNFDVVRTPG-S----------------SVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHI 475 (521)
T ss_dssp --BSCEEEESSCCEEEEECTT-C----------------SCCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESC
T ss_pred --CCCCEEEccceEEEEecCC-C----------------CccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeCh
Confidence 5899999999999998752 1 1357789999999999 999999999999999999999999
Q ss_pred hhhhhcCceEEEEeccCC--CCCCCC-CCCCCCCCCCCCC
Q psy978 574 EFHVETGMALVFKVGEHE--DMAPVP-KDFPTCGDYYNVD 610 (695)
Q Consensus 574 ~~H~~~GM~~v~~V~~~~--~~~~~P-~~~p~Cg~~~~~~ 610 (695)
+||+++|||++|.|+.++ ++.++| ...+.|+.|....
T Consensus 476 ~~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~~~~ 515 (521)
T 1v10_A 476 DWHLEAGLAVVFAEDIPNIPIANAISPAWDDLCPKYNANN 515 (521)
T ss_dssp HHHHTTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHTTCC
T ss_pred HHHHhCCCeEEEEECCcchhhccCCChHHhhhchhhhccC
Confidence 999999999999997654 344455 4578999997654
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=5.7e-92 Score=794.63 Aligned_cols=476 Identities=32% Similarity=0.554 Sum_probs=366.2
Q ss_pred EEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCC----CCceE
Q psy978 26 TYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLME----ESTSI 101 (695)
Q Consensus 26 ~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~----~~~si 101 (695)
.|+|++++.. +++||+++.+|+|||++ ||+|+|++||+|+|+|+|+|.+ ++++|
T Consensus 6 ~~~l~i~~~~---------------------~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsi 63 (503)
T 1hfu_A 6 VDTMTLTNAN---------------------VSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSI 63 (503)
T ss_dssp EEEEEEEEEE---------------------ECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCE
T ss_pred eEEEEEEEEE---------------------ECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccE
Confidence 5888888743 57899999999999999 9999999999999999999953 89999
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEE-cCCCeeeEEEccccCcCCCCceeEEEEeCCCCCCCCCCCCCCCC
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFN-ADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDL 180 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~-~~~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~ 180 (695)
||||++|++++||||+|++|||||+||++|+|+|+ ++++||||||||.+.|+++||+|+|||+++.+ +....|+.|.
T Consensus 64 HwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~~~~~~~d~ 141 (503)
T 1hfu_A 64 HWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND--PHAALYDEDD 141 (503)
T ss_dssp EEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC--TTGGGCSBCS
T ss_pred eccceeccCCCccCCCcccccCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCC--CcccCCCCCC
Confidence 99999999999999999999999999999999999 58899999999999999999999999998753 3334567664
Q ss_pred CceEEEEeeecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCcc
Q psy978 181 PEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCP 260 (695)
Q Consensus 181 ~e~~l~l~dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~ 260 (695)
.|++|+|+||+++...+.. +...++++||||++.+.+ . ...+.+.++|++|++|||||||++... .
T Consensus 142 ~e~~l~l~Dw~~~~~~~~~-------~~~~~d~~liNG~~~~~~---~---~~~~~~~~~v~~g~~~RlRliN~~~~~-~ 207 (503)
T 1hfu_A 142 ENTIITLADWYHIPAPSIQ-------GAAQPDATLINGKGRYVG---G---PAAELSIVNVEQGKKYRMRLISLSCDP-N 207 (503)
T ss_dssp TTSEEEEEEECSSCGGGCC----------CCSEEEETTBCCBTT---C---CCCCCCEEEECTTCEEEEEEEECCSSC-C
T ss_pred ceEEEEEcccccCChHHhc-------CCCCCCEEEECcccccCC---C---CCCcceEEEEcCCCEEEEEEEecCCcc-c
Confidence 5899999999998764421 114689999999987532 1 123346899999999999999999987 7
Q ss_pred EEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCc---ccCCcceEEEEEEcCC
Q psy978 261 IELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDE---RFTSAYQTAVLRYEGA 337 (695)
Q Consensus 261 ~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~---~~~~~~~~ail~Y~~~ 337 (695)
+.|+|+||+|+|||+||.+++|+.+++|.|+|||||||+|++++++|+|||++.....+.. .+......|+|+|.++
T Consensus 208 ~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~ 287 (503)
T 1hfu_A 208 WQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGA 287 (503)
T ss_dssp EEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTS
T ss_pred EEEEEcCceEEEEeccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCC
Confidence 9999999999999999999999999999999999999999999888999999875533211 0122344799999876
Q ss_pred CCCCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCCC-CCCccccCCceEEEEEEeeeecCCCCccccccc
Q psy978 338 PDESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSAS-SDVRLQDRANLTFYISYDFYEIDNPHFHLSTLY 416 (695)
Q Consensus 338 ~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~ 416 (695)
+...|..... .. ..+++ ..+|.++.+.. .........+..+.+++.+.
T Consensus 288 ~~~~p~~~~~-~~-------~~~l~----------~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~------------- 336 (503)
T 1hfu_A 288 ANADPTTSAN-PN-------PAQLN----------EADLHALIDPAAPGIPTPGAADVNLRFQLGFS------------- 336 (503)
T ss_dssp CSSCCCCCCC-SS-------CCBCC----------GGGCBBSSSCSCSSCSSTTCSSEEEECCEEEE-------------
T ss_pred CCCCCCCCCC-Cc-------cCCCc----------cccccccCccCCCCcccCCcceEEEEEEeecc-------------
Confidence 5432221100 00 00010 01222221100 01111224455554433221
Q ss_pred ccccccccccccccccCCccccCCCCccccccccCCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeCCCCCC
Q psy978 417 GFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVAYD 496 (695)
Q Consensus 417 g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~~~ 496 (695)
+. .|+|||++|..|..|+|.+... + .+. ...++.+++++.++.|++|||+|+|... .
T Consensus 337 --------~~--~~~iNg~~~~~~~~P~l~~~~~--g-~~~--------~~~~~~~~~~~~v~~g~~vei~l~~n~~--~ 393 (503)
T 1hfu_A 337 --------GG--RFTINGTAYESPSVPTLLQIMS--G-AQS--------ANDLLPAGSVYELPRNQVVELVVPAGVL--G 393 (503)
T ss_dssp --------TT--EEEETTBCCCCCSSCHHHHHHT--T-CCS--------GGGSSSTTSEEEECSSCEEEEEEECCST--T
T ss_pred --------Cc--eEEECCCccCCCCCcchhhhhc--C-Ccc--------cccCCCCceEEEccCCCEEEEEEECCCC--C
Confidence 01 4689999999998898876432 1 100 1123456789999999999999996431 5
Q ss_pred CCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEe-CCCCEEEEEEEecCceeeEEeecchh
Q psy978 497 ANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTV-PDGGFTIIRFHATNPGYWLFHCHIEF 575 (695)
Q Consensus 497 ~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~V-p~~G~~vIRF~AdNPG~Wl~HCHi~~ 575 (695)
+.||||||||+||||+++. + ..+|+.+|+|||||.| |++||++|||+|||||.|||||||+|
T Consensus 394 ~~HP~HLHGh~F~Vl~~~~-~----------------~~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~ 456 (503)
T 1hfu_A 394 GPHPFHLHGHAFSVVRSAG-S----------------STYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEF 456 (503)
T ss_dssp CCCEEEETTCCEEEEECTT-C----------------CCCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHH
T ss_pred CCCCEEEecceEEEEecCC-C----------------CccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchh
Confidence 6899999999999998752 1 1357789999999999 99999999999999999999999999
Q ss_pred hhhcCceEEEEeccCC--CCCCCCC-CCCCCCCCCCCC
Q psy978 576 HVETGMALVFKVGEHE--DMAPVPK-DFPTCGDYYNVD 610 (695)
Q Consensus 576 H~~~GM~~v~~V~~~~--~~~~~P~-~~p~Cg~~~~~~ 610 (695)
|+++|||++|.|+.++ ++.++|. ..+.|+.|....
T Consensus 457 H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~~~~ 494 (503)
T 1hfu_A 457 HLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIYDDLP 494 (503)
T ss_dssp HHHTTCEEEEEECHHHHHHHCCCCHHHHHHHHHHHTCC
T ss_pred HhhCCCeEEEEECchhhhhccCCChHHhhhccchhhcC
Confidence 9999999999997643 3444564 477999997653
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=5.6e-91 Score=794.96 Aligned_cols=502 Identities=26% Similarity=0.445 Sum_probs=366.7
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCce-EEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCce
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVK-RAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTS 100 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~-~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~s 100 (695)
+++.+|+|++++... -+.+||++ +.+|+|||++|||+|+|++||+|+|+|+|+|..++++
T Consensus 31 ~~~~~~~l~~~~~~~-------------------~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~ts 91 (559)
T 2q9o_A 31 GVTQSYVFNLTEVDN-------------------WMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTS 91 (559)
T ss_dssp CCEEEEEEEEEEEEE-------------------EECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBC
T ss_pred CeEEEEEEEEEEeEe-------------------eECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCce
Confidence 557788888887531 14689999 9999999999999999999999999999999668999
Q ss_pred EeeCCCccCCCCCCCCCCCccccCCCC-CCeEEEEEEcCCCeeeEEEccccCcCCCCceeEEEEeCCCCCCCCCCCCCCC
Q psy978 101 IHWHGHHQVDSPYMDGVPHLTQCPVPP-RSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFD 179 (695)
Q Consensus 101 iH~HGl~~~~~~~~DG~p~vtqcpI~P-G~~~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d 179 (695)
|||||++|.+++||||+|++|||||+| |++|+|+|+++++||||||||.+.|+++||+|+|||+++... .||.|
T Consensus 92 iHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d 166 (559)
T 2q9o_A 92 IHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDID 166 (559)
T ss_dssp EEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEE
T ss_pred EEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCccc
Confidence 999999999999999999999999999 999999999999999999999999999999999999986532 35543
Q ss_pred CCceEEEEeeecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCc
Q psy978 180 LPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNC 259 (695)
Q Consensus 180 ~~e~~l~l~dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~ 259 (695)
..+|+|+||+++...+.+.... ......++++||||++.+.+ . .....+.++|++|++|||||||++...
T Consensus 167 --~~~l~l~Dw~~~~~~~~~~~~~-~~~~~~~d~~liNG~~~~~~---~---~~g~~~~~~v~~g~~~RlRliNa~~~~- 236 (559)
T 2q9o_A 167 --LGVFPITDYYYRAADDLVHFTQ-NNAPPFSDNVLINGTAVNPN---T---GEGQYANVTLTPGKRHRLRILNTSTEN- 236 (559)
T ss_dssp --EEEEEEEEECSSCHHHHHHHHT-TSCCCCBSEEEETTBCBCTT---T---CCBCCCEEEECTTCEEEEEEEECCSSC-
T ss_pred --ceEEEEeccccCCHHHHhhhhh-cCCCCccceeEECCccccCc---C---CCCCceEEEEcCCCEEEEEEEecCCCc-
Confidence 2389999999988765543222 22345789999999976521 1 111235899999999999999999987
Q ss_pred cEEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEee--ccCCCcccCCcceEEEEEEcCC
Q psy978 260 PIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRG--LMDCDERFTSAYQTAVLRYEGA 337 (695)
Q Consensus 260 ~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~--~~~~~~~~~~~~~~ail~Y~~~ 337 (695)
.+.|+|+||+|+|||+||.+++|+.+++|.|+|||||||+|++++++|+|||++.. ...|.. .......|+|+|.++
T Consensus 237 ~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~-~~~~~~~ail~y~~~ 315 (559)
T 2q9o_A 237 HFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGG-SLNPHPAAIFHYAGA 315 (559)
T ss_dssp CEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCC-BSSSCCEEEEEETTS
T ss_pred eEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCC-CCCCceeEEEEECCC
Confidence 79999999999999999999999999999999999999999999888999999976 444532 123456899999876
Q ss_pred CCCCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCC-CCCCCccccCCceEEEEEEeeeecCCCCccccccc
Q psy978 338 PDESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHS-ASSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLY 416 (695)
Q Consensus 338 ~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~ 416 (695)
+...|...+ ... ....|... ..+.++.+ +.....+....+..+.+.....
T Consensus 316 ~~~~P~~~~-~~~----------~~~~~~~~-----~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~------------- 366 (559)
T 2q9o_A 316 PGGLPTDEG-TPP----------VDHQCLDT-----LDVRPVVPRSVPVNSFVKRPDNTLPVALDLT------------- 366 (559)
T ss_dssp CCSCCCCCC-CCC----------CCCTTCCC-----SCCCBSSCCBCCCTTCCCCGGGEEEEEEECS-------------
T ss_pred CCCCCCCCC-CcC----------CCcccccc-----cccccCCCCCCCCcccccceeEEEEEEeecC-------------
Confidence 543332111 000 00001110 11111110 0000011122234444332210
Q ss_pred ccccccccccccccccCCccccCC-CCccccccccCCccccccCCccCCCCCCCcccceeeeeCCC-CEEEEEEEeCCC-
Q psy978 417 GFDEVKRLEKVRTPQLNHLSFRFP-TFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLE-SVVELIIIDEGV- 493 (695)
Q Consensus 417 g~~~~~~~~~~~~~~iN~~s~~~P-~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g-~vVeivl~N~~~- 493 (695)
....+.|+|||++|..+ ..|+|.+...- ...+..+.+++.++.+ ++++|+++|...
T Consensus 367 -------~~~~~~~~iNg~s~~~~~~~P~L~~~~~g--------------~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~ 425 (559)
T 2q9o_A 367 -------GTPLFVWKVNGSDINVDWGKPIIDYILTG--------------NTSYPVSDNIVQVDAVDQWTYWLIENDPEG 425 (559)
T ss_dssp -------SSSSCEEEETTBCCCCCTTSCHHHHHHHT--------------CCCCCGGGCEEEECCSSCEEEEEEEECTTS
T ss_pred -------CCceEEEEECCEecccCCCCCcHhHhhcC--------------CccCCCCceEEEcCCCCEEEEEEEeCCCcc
Confidence 01234688999999764 67877654321 1123345678888765 556666666431
Q ss_pred CCCCCCceeecCCCeEEEEEcccCccccccchhcccc-cccccCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEeec
Q psy978 494 AYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDA-KGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCH 572 (695)
Q Consensus 494 ~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~-~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~AdNPG~Wl~HCH 572 (695)
...+.||||||||+||||+++..+.+ ...+...++. .+...+|+.+|+|||||.||++||++|||+|||||.||||||
T Consensus 426 ~~~~~HP~HLHGh~F~Vl~~g~~~~~-~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCH 504 (559)
T 2q9o_A 426 PFSLPHPMHLHGHDFLVLGRSPDVPA-ASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCH 504 (559)
T ss_dssp SCCCCEEEEESSSCEEEEEESCCCCT-TSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEEC
T ss_pred ccCCCCcEEECCCceEEEeccccccc-ccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEec
Confidence 01468999999999999998731100 0001111111 012457889999999999999999999999999999999999
Q ss_pred chhhhhcCceEEEEeccCC--CCCCC--CC-CCCCCCCCCCC
Q psy978 573 IEFHVETGMALVFKVGEHE--DMAPV--PK-DFPTCGDYYNV 609 (695)
Q Consensus 573 i~~H~~~GM~~v~~V~~~~--~~~~~--P~-~~p~Cg~~~~~ 609 (695)
|+||+++|||++|.|+..+ ++.++ |+ .+++|++|...
T Consensus 505 il~H~~~GM~~~~~v~~~~~~~~~~~~~p~~~~~~C~~~~~~ 546 (559)
T 2q9o_A 505 IAWHVSGGLSVDFLERPADLRQRISQEDEDDFNRVCDEWRAY 546 (559)
T ss_dssp CHHHHHTTCEEEEEECHHHHGGGCCHHHHHHHHHHHHHHHHH
T ss_pred chhHhhcCCeEEEEECcchhhhccccCCchhhhhhccccccc
Confidence 9999999999999997532 33333 54 45799999654
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2e-80 Score=689.77 Aligned_cols=405 Identities=22% Similarity=0.358 Sum_probs=312.9
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceE
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSI 101 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~si 101 (695)
+.+.+|++++++.. +.+||.++.+|+|||++|||+|+|++||+|+|+|+|+|. ++++|
T Consensus 14 ~~~~~~~l~~~~~~---------------------~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsi 71 (439)
T 2xu9_A 14 GGLLSLKLSATPTP---------------------LAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLP-EPTNL 71 (439)
T ss_dssp TTEEEEEEEEEEEE---------------------EEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSS-SCBCC
T ss_pred CCeEEEEEEEEEEE---------------------EEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCC-CCcce
Confidence 45778999988753 355799999999999999999999999999999999995 89999
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEc--CCCeeeEEEccc----cCcCCCCceeEEEEeCCCCCCCCCCC
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNA--DSPGTHFWHSHT----GSQRGDGSFGAFIIRKPRPREVHAPL 175 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~--~~~GT~wYHsH~----~~q~~~Gl~G~lIV~~~~~~~p~~~~ 175 (695)
||||+++.+ ++||++ ++|+||++|+|+|++ +++||||||||. +.|+.+||+|+|||+++.+..|.
T Consensus 72 HwHG~~~~~--~~DG~~----~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~--- 142 (439)
T 2xu9_A 72 HWHGLPISP--KVDDPF----LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPE--- 142 (439)
T ss_dssp EEETCCCCT--TTSCTT----CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHH---
T ss_pred EeCCCCCCc--cccCCc----ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCcc---
Confidence 999999865 899986 359999999999997 479999999997 47999999999999986532221
Q ss_pred CCCCCCceEEEEeeecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCC
Q psy978 176 YDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAG 255 (695)
Q Consensus 176 ~d~d~~e~~l~l~dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~ 255 (695)
...|. |++|+|+||+++..............+..++.++|||+..+ .++|++| +|||||||++
T Consensus 143 ~~~~~-e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~~p---------------~l~v~~g-~~RlRliN~~ 205 (439)
T 2xu9_A 143 LREAE-EHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGALRP---------------TLVAQKA-TLRLRLLNAS 205 (439)
T ss_dssp HHTSE-EEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEESC---------------EEECSSS-EEEEEEEECC
T ss_pred CCCCC-cEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCccCC---------------cEEecCC-eEEEEEEecC
Confidence 12233 79999999998763100000000001245789999999654 8999999 9999999999
Q ss_pred CCCccEEEEEcCcceeEecCCCCcc-ceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcc------------
Q psy978 256 YLNCPIELSIANHTLTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDER------------ 322 (695)
Q Consensus 256 ~~~~~~~~~i~gh~~~Via~DG~~v-~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~------------ 322 (695)
... .+.|+|+||+|+||++||.++ +|+.+++|.|+|||||||+|++++ +|+|||++.....+...
T Consensus 206 ~~~-~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~ 283 (439)
T 2xu9_A 206 NAR-YYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMP 283 (439)
T ss_dssp SSC-CEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEE
T ss_pred CCc-eEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCcccccccccccccc
Confidence 887 799999999999999999997 899999999999999999999998 68999998644332210
Q ss_pred --cCCcceEEEEEEcCCCCCCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEE
Q psy978 323 --FTSAYQTAVLRYEGAPDESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISY 400 (695)
Q Consensus 323 --~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~ 400 (695)
.......++|+|.+++...+ .|. .+. .+..+. ....++++.++.
T Consensus 284 ~~~~~~~~~~~l~~~~~~~~~~--~p~---------~l~---------------~~~~l~--------~~~~~r~~~l~~ 329 (439)
T 2xu9_A 284 QGPSRPETLLYLIAPKNPKPLP--LPK---------ALS---------------PFPTLP--------APVVTRRLVLTE 329 (439)
T ss_dssp CCSCCCEEEEEEEECSSCCCCC--CCS---------CCC---------------CCCCCC--------CCSEEEEEEEEE
T ss_pred CCCCCcceeEEEEecCCCcccc--Ccc---------cCC---------------CcccCC--------CCCcceEEEEEe
Confidence 01234678899976542111 000 000 000100 011234555544
Q ss_pred eeeecCCCCcccccccccccccccccccccccCCccccCCCCccccccccCCccccccCCccCCCCCCCcccceeeeeCC
Q psy978 401 DFYEIDNPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPL 480 (695)
Q Consensus 401 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 480 (695)
+. . + ..|.|||++|..+.. .+.+++
T Consensus 330 ~~--~-------------------g--~~~~iNg~~~~~~~~--------------------------------~~~~~~ 354 (439)
T 2xu9_A 330 DM--M-------------------A--ARFFINGQVFDHRRV--------------------------------DLKGQA 354 (439)
T ss_dssp EG--G-------------------G--TEEEETTBCCCTTCC--------------------------------CEEECT
T ss_pred ec--c-------------------C--ceEeECCEECCCCCC--------------------------------ceecCC
Confidence 32 0 0 146799999853321 267889
Q ss_pred CCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCEEEEEEE
Q psy978 481 ESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFH 560 (695)
Q Consensus 481 g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~ 560 (695)
|++++|+|+|.+ .+.||||||||+||||+++ |.+ +.+|+|||||.||++||++|||+
T Consensus 355 g~~~~~~~~N~~---~~~HP~HLHG~~F~Vl~~~--g~~------------------~~~p~~rDTv~v~p~~~v~i~f~ 411 (439)
T 2xu9_A 355 QTVEVWEVENQG---DMDHPFHLHVHPFQVLSVG--GRP------------------FPYRAWKDVVNLKAGEVARLLVP 411 (439)
T ss_dssp TCEEEEEEEECS---SSCEEEEESSCCBEEEEET--TEE------------------CSSCCCBSEEEECTTCEEEEEEE
T ss_pred CCEEEEEEEcCC---CCCCCceeCCCcEEEEeeC--CCC------------------CCCCCCeEEEEeCCCCEEEEEEE
Confidence 999999999986 5789999999999999875 211 23689999999999999999999
Q ss_pred ecCceeeEEeecchhhhhcCceEEEEec
Q psy978 561 ATNPGYWLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 561 AdNPG~Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
|||||.|||||||+||++.|||++|+|+
T Consensus 412 adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 412 LREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp CCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred cCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 9999999999999999999999999986
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=7.4e-79 Score=678.33 Aligned_cols=406 Identities=18% Similarity=0.193 Sum_probs=308.4
Q ss_pred eEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEee
Q psy978 24 TCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHW 103 (695)
Q Consensus 24 ~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~ 103 (695)
+.+|+|++++... ...||.++.+|+|||++|||+|+|++||+|+|+|+|+| .++++|||
T Consensus 18 ~~~~~l~~~~~~~--------------------~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l-~~~tsiHw 76 (451)
T 2uxt_A 18 GQPLFMTVQRAHW--------------------SFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRL-TENVSMTV 76 (451)
T ss_dssp SCCEEEEEEECCG--------------------GGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECS-SSCBCEEE
T ss_pred ceEEEEEEEEEEE--------------------EcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECC-CCCccEEE
Confidence 4578999887431 12378999999999999999999999999999999999 58999999
Q ss_pred CCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCC-CeeeEEEccc----cCcCCCCceeEEEEeCCCCCC-CCCCCCC
Q psy978 104 HGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADS-PGTHFWHSHT----GSQRGDGSFGAFIIRKPRPRE-VHAPLYD 177 (695)
Q Consensus 104 HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~-~GT~wYHsH~----~~q~~~Gl~G~lIV~~~~~~~-p~~~~~d 177 (695)
||+++.++ |||+| ||||+||++|+|+|++++ +||||||||. +.|+.+||+|+|||+++.+.. +....|+
T Consensus 77 HG~~~~~~--~DG~~---~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~ 151 (451)
T 2uxt_A 77 AGLQVPGP--LMGGP---ARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYG 151 (451)
T ss_dssp ETCCCCGG--GSCSG---GGCBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBT
T ss_pred CCccCCCC--CCCCC---cCcCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCC
Confidence 99999875 99998 999999999999999986 9999999998 689999999999999865321 1112232
Q ss_pred CCCCceEEEEeeecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCC
Q psy978 178 FDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYL 257 (695)
Q Consensus 178 ~d~~e~~l~l~dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~ 257 (695)
. .|++|+|+||+++...+.... .....+..++++||||+..+ .++|++| +|||||||++..
T Consensus 152 ~--~e~~l~l~D~~~~~~~~~~~~-~~~~~~~~~d~~liNG~~~p---------------~~~v~~g-~~RlRliNa~~~ 212 (451)
T 2uxt_A 152 V--DDFPVIIQDKRLDNFGTPEYN-EPGSGGFVGDTLLVNGVQSP---------------YVEVSRG-WVRLRLLNASNS 212 (451)
T ss_dssp T--TEEEEEEEEEEECTTSCEECC-CCSSSCCCCSEEEETTEESC---------------EEEECSS-EEEEEEEECCSS
T ss_pred C--ceEEEEEEeeecCCCCceecc-cccCCCCcCCEEEECCcccc---------------eEEecCC-EEEEEEEccCCc
Confidence 2 279999999998765433221 12234567899999999764 8999999 999999999988
Q ss_pred CccEEEEE-cCcceeEecCCCCcc-ceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcc-------cCCcce
Q psy978 258 NCPIELSI-ANHTLTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDER-------FTSAYQ 328 (695)
Q Consensus 258 ~~~~~~~i-~gh~~~Via~DG~~v-~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~-------~~~~~~ 328 (695)
. .+.|+| +||+|+||++||.++ +|+.+++|.|+|||||||+|++++ +++|||++.....+... ......
T Consensus 213 ~-~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 290 (451)
T 2uxt_A 213 R-RYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVS 290 (451)
T ss_dssp C-CEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT-CCCEEEEC----------------CCCCSC
T ss_pred e-eEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCC
Confidence 6 799999 899999999999998 899999999999999999999996 48999987543322110 111234
Q ss_pred EEEEEEcCCCCCCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEEeeeecCCC
Q psy978 329 TAVLRYEGAPDESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNP 408 (695)
Q Consensus 329 ~ail~Y~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~ 408 (695)
.++++|.......+.. .. + + ..|.++.. . ..+...++.+.++
T Consensus 291 ~~il~~~~~~~~~~~~-~~-------------~------p-----~~L~~~~~-~---~~~~~~~~~~~l~--------- 332 (451)
T 2uxt_A 291 TLVLTLRPTGLLPLVT-DS-------------L------P-----MRLLPTEI-M---AGSPIRSRDISLG--------- 332 (451)
T ss_dssp CEEEEEEECSCCC-----C-------------C------C-----SCSSSSCC-C---CCCCSEEEEEEEC---------
T ss_pred cceEEEEecCCCcCcc-cc-------------C------c-----cccCCCCC-C---CCCCcceEEEEEe---------
Confidence 5788887543211100 00 0 0 00111110 0 0011222333221
Q ss_pred CcccccccccccccccccccccccCCccccCCCCccccccccCCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEE
Q psy978 409 HFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELII 488 (695)
Q Consensus 409 ~~~~~~~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl 488 (695)
+ .|.|||++|..+.. .+.++.|++|+|+|
T Consensus 333 ----------------~---~~~iNg~~f~~~~~--------------------------------~~~~~~G~~~~~~l 361 (451)
T 2uxt_A 333 ----------------D---DPGINGQLWDVNRI--------------------------------DVTAQQGTWERWTV 361 (451)
T ss_dssp ----------------S---SSSBTTBCCCTTCC--------------------------------CEEEETTCEEEEEE
T ss_pred ----------------e---EEEECCEeCCCCCC--------------------------------cEEcCCCCEEEEEE
Confidence 0 36899999863211 26788999999999
Q ss_pred EeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCEEEEEEEecCcee--
Q psy978 489 IDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGY-- 566 (695)
Q Consensus 489 ~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~AdNPG~-- 566 (695)
+|. +.||||||||+||||+++ |. ..++.+|.|||||.| +++++|||+|||||.
T Consensus 362 ~N~-----~~HP~HLHGh~F~Vl~~~--G~----------------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~ 416 (451)
T 2uxt_A 362 RAD-----EPQAFHIEGVMFQIRNVN--GA----------------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAH 416 (451)
T ss_dssp EEE-----EEEEEEETTCEEEEEEET--TB----------------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTT
T ss_pred ECC-----CCcCeEECCceEEEEeeC--Cc----------------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCC
Confidence 996 379999999999999875 31 134567899999999 899999999999988
Q ss_pred --eEEeecchhhhhcCceEEEEeccC
Q psy978 567 --WLFHCHIEFHVETGMALVFKVGEH 590 (695)
Q Consensus 567 --Wl~HCHi~~H~~~GM~~v~~V~~~ 590 (695)
|||||||++|++.|||++|+|...
T Consensus 417 g~w~~HCHil~H~d~GMm~~~~v~~~ 442 (451)
T 2uxt_A 417 FPFYFNSQTLEMADRGSIGQLLVNPV 442 (451)
T ss_dssp BCEEEEESSHHHHHTTCEEEEEEECS
T ss_pred CceEEeCCchhHHhCCCcEEEEEccC
Confidence 999999999999999999999753
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.8e-77 Score=678.57 Aligned_cols=445 Identities=21% Similarity=0.277 Sum_probs=322.3
Q ss_pred ceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEe
Q psy978 23 RTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIH 102 (695)
Q Consensus 23 ~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH 102 (695)
.+.+|+|+++.... .+.+||.++.+|+|||++|||+|+|++||+|+|+|+|+|. ++++||
T Consensus 35 ~~~~~~l~~~~~~~-------------------~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~-~~tsiH 94 (534)
T 3abg_A 35 EIWYYEVEIKPFTH-------------------QVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAE-APNSVH 94 (534)
T ss_dssp CCEEEEEEEECCEE-------------------CCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSS-SCBCEE
T ss_pred ceEEEEEEEEEEEE-------------------EecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCC-CCceEE
Confidence 35789999986332 2578898999999999999999999999999999999994 899999
Q ss_pred eCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCC-CeeeEEEcccc----CcCCCCceeEEEEeCCCCCCCC-CCCC
Q psy978 103 WHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADS-PGTHFWHSHTG----SQRGDGSFGAFIIRKPRPREVH-APLY 176 (695)
Q Consensus 103 ~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~-~GT~wYHsH~~----~q~~~Gl~G~lIV~~~~~~~p~-~~~~ 176 (695)
|||+++.+ +|||+ +||+|+||++|+|+|++++ +||||||||.. .|+.+||+|+|||+++.+.... ...|
T Consensus 95 wHGl~~~~--~~DG~---~~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~ 169 (534)
T 3abg_A 95 LHGSFSRA--AFDGW---AEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGY 169 (534)
T ss_dssp EETCCCCT--TTTTC---SSSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCH
T ss_pred ECCCcCCC--CCCCC---CCCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccC
Confidence 99999976 69997 4899999999999999976 68999999986 4778999999999987653211 0111
Q ss_pred -CCCCCceEEEEeeecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCC
Q psy978 177 -DFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAG 255 (695)
Q Consensus 177 -d~d~~e~~l~l~dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~ 255 (695)
++ |++|+|+||+++...+.+.. .....+..++.+||||+..+ .+.|++ ++|||||||++
T Consensus 170 ~~~---d~~l~l~d~~~~~~g~~~~~-~~~~~~~~gd~~lvNG~~~p---------------~~~v~~-~~~RlRliNa~ 229 (534)
T 3abg_A 170 GEF---DIPMILTSKQYTANGNLVTT-NGELNSFWGDVIHVNGQPWP---------------FKNVEP-RKYRFRFLDAA 229 (534)
T ss_dssp HHH---SCCEEEEEECBCSSSCBCCC-TTCSSCCCCSEEEETTEESC---------------BCBCCS-SEEEEEEEECC
T ss_pred Ccc---eEEEEEeeeeecCCCceecc-CCCCccccCceeccCCccCc---------------eEEecC-cEEEEEEEecC
Confidence 22 47899999988754333221 11122345789999999654 678888 59999999999
Q ss_pred CCCccEEEEEcC-------cceeEecCCCCc-cceeEEeEEEEcCCceEEEEEEcCCCCc-ceEEEEeec-cCCCc-ccC
Q psy978 256 YLNCPIELSIAN-------HTLTAINSDGGD-IKPISVGSIVSYAGERWDFILNATHHVG-NYWIKMRGL-MDCDE-RFT 324 (695)
Q Consensus 256 ~~~~~~~~~i~g-------h~~~Via~DG~~-v~p~~~d~l~l~pGeR~dVlv~a~~~~g-~Y~Ir~~~~-~~~~~-~~~ 324 (695)
... .+.|+|++ |+|+|||+||.+ ++|+.++.|.|+|||||||+|++++.+| +|||+.... ..|.. ...
T Consensus 230 ~~~-~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~ 308 (534)
T 3abg_A 230 VSR-SFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTD 308 (534)
T ss_dssp SSC-CEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSS
T ss_pred Ccc-eEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccC
Confidence 987 79999987 999999999984 6899999999999999999999998666 699986432 11211 001
Q ss_pred CcceEEEEEEcCCCCCCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEEeeee
Q psy978 325 SAYQTAVLRYEGAPDESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYE 404 (695)
Q Consensus 325 ~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~ 404 (695)
.....+|++|..+..... .+.. . + + ..|.+++.+. .....++.+.+...
T Consensus 309 ~~~~~~il~~~~~~~~~~------~~~~-----~--~------P-----~~L~~~~~p~----~~~~~~~~~~~~~~--- 357 (534)
T 3abg_A 309 YDNTDKVMRFVVADDTTQ------PDTS-----V--V------P-----ANLRDVPFPS----PTTNTPRQFRFGRT--- 357 (534)
T ss_dssp STTTSEEEEEECCCCSSC------SCCC-----C--C------C-----CCCCCCSCCC----CCCCCCEEEECSCC---
T ss_pred cCCcceeEEEecCCCCcC------CCCC-----C--C------c-----cccccCCCCC----CccccceEEEEecc---
Confidence 123458888875432100 0000 0 0 0 0111111000 11123444322100
Q ss_pred cCCCCcccccccccccccccccccccccCCccccCCCCccccccccCCccccccCCccCCCCCCCcccceeeeeCCCCEE
Q psy978 405 IDNPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVV 484 (695)
Q Consensus 405 ~~~~~~~~~~~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vV 484 (695)
...|.|||++|..+..|+| +.++.|+++
T Consensus 358 ----------------------~~~w~iNG~~f~~~~~p~l------------------------------~~v~~G~~~ 385 (534)
T 3abg_A 358 ----------------------GPTWTINGVAFADVQNRLL------------------------------ANVPVGTVE 385 (534)
T ss_dssp ----------------------CSTTCCCCBTTBCTTSCCC------------------------------CEECTTCEE
T ss_pred ----------------------CceeEECCcccCCCCCcce------------------------------eeccCCCEE
Confidence 0157899999975544432 357789999
Q ss_pred EEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCEEEEEEE-ecC
Q psy978 485 ELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFH-ATN 563 (695)
Q Consensus 485 eivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~-AdN 563 (695)
+|+|+|.+. .+.||||||||+||||+++..+.. ....++++ .|||||.|+++++++|||+ |||
T Consensus 386 ~w~i~N~~~--~~~HP~HLHG~~F~Vl~~~~g~~~-------------~~~~~~~~-~~rDTV~v~pg~~v~I~~~~adn 449 (534)
T 3abg_A 386 RWELINAGN--GWTHPIHIHLVDFKVISRTSGNNA-------------RTVMPYES-GLKDVVWLGRRETVVVEAHYAPF 449 (534)
T ss_dssp EEEEEECSS--SCCCCEEESSCCEEEEEESSCCSS-------------SCCCSGGG-SCBSEECCCSSEEEEEEEECCSC
T ss_pred EEEEEcCCC--CCCcCEEECCeeEEEEEEcCCCCc-------------CcCCcccc-CCcCeEEcCCCCEEEEEEEECCC
Confidence 999999762 358999999999999998532110 01233445 7999999999999999999 999
Q ss_pred ceeeEEeecchhhhhcCceEEEEeccCCCCCCCCCCC--CCCCCCCCCCCC
Q psy978 564 PGYWLFHCHIEFHVETGMALVFKVGEHEDMAPVPKDF--PTCGDYYNVDSV 612 (695)
Q Consensus 564 PG~Wl~HCHi~~H~~~GM~~v~~V~~~~~~~~~P~~~--p~Cg~~~~~~~~ 612 (695)
||.|||||||+||++.|||+.|.|...+++..+...+ |.|..|+.....
T Consensus 450 pG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~~~p~~~~w~~~~~~ 500 (534)
T 3abg_A 450 PGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPMEELWQARPYE 500 (534)
T ss_dssp CEEEEEEESCHHHHHTTCEEEEEECSSCCSSTTTTSCSSSSSCCCSSCCSC
T ss_pred CccEEEecChHHHHhcCCceEEEEEeccccCCCCcccCCCCCccccccccc
Confidence 9999999999999999999999998755321111222 466777666543
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=3.3e-77 Score=675.64 Aligned_cols=417 Identities=23% Similarity=0.310 Sum_probs=302.7
Q ss_pred eCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCC---------------------CCceEeeCCCccCCCCCCC
Q psy978 57 IPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLME---------------------ESTSIHWHGHHQVDSPYMD 115 (695)
Q Consensus 57 ~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~---------------------~~~siH~HGl~~~~~~~~D 115 (695)
+.+++.++.+|+|||++|||+|+|++||+|+|+|+|+|+. .+|+|||||+++.+ +||
T Consensus 39 ~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~~--~~D 116 (513)
T 2wsd_A 39 LHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPD--DSD 116 (513)
T ss_dssp SSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCCG--GGS
T ss_pred eCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCCC--ccC
Confidence 3456678999999999999999999999999999999963 28999999999974 799
Q ss_pred CCCC--ccccCCCCCCeE---EEEEEcC-CCeeeEEEcccc----CcCCCCceeEEEEeCCCCCCCCCCCCCCCCCceEE
Q psy978 116 GVPH--LTQCPVPPRSTF---RYKFNAD-SPGTHFWHSHTG----SQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIM 185 (695)
Q Consensus 116 G~p~--vtqcpI~PG~~~---tY~f~~~-~~GT~wYHsH~~----~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l 185 (695)
|+|+ ++||||+||++| +|+|+++ ++||||||||.. .|+++||+|+|||+++.+.... +...|. |++|
T Consensus 117 G~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~--lp~~d~-d~~l 193 (513)
T 2wsd_A 117 GYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLK--LPSDEY-DVPL 193 (513)
T ss_dssp CCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGGC--CCCGGG-EEEE
T ss_pred CCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccccc--CCCCCC-cEEE
Confidence 9995 899999999555 9999985 699999999985 4889999999999986542211 112233 6899
Q ss_pred EEeeecccchhhhhhccc-----------CCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeC
Q psy978 186 LITDWSHVLGVEMFNAHH-----------HADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINA 254 (695)
Q Consensus 186 ~l~dw~~~~~~~~~~~~~-----------~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa 254 (695)
+|+||+++...+.+.... ....+..++++||||+..+ .+.|++| +|||||||+
T Consensus 194 ~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~p---------------~~~v~~~-~~RlRliNa 257 (513)
T 2wsd_A 194 LITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWP---------------YLEVEPR-KYRFRVINA 257 (513)
T ss_dssp EEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESC---------------EEECCSS-EEEEEEEEC
T ss_pred EEEeeecCCCCceecccccccccccccccccccccccceEEECCcccc---------------eEEecCC-EEEEEEEcc
Confidence 999999876543322110 0012346799999999764 7889885 899999999
Q ss_pred CCCCccEEEEEcCc-ceeEecCCCCcc-ceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEE
Q psy978 255 GYLNCPIELSIANH-TLTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVL 332 (695)
Q Consensus 255 ~~~~~~~~~~i~gh-~~~Via~DG~~v-~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail 332 (695)
+... .+.|+|++| +|+|||+||.++ +|+.+++|.|+|||||||+|++++.+|+ ++++.....|...+......+++
T Consensus 258 ~~~~-~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~-~~~l~~~~~~~~~~~~~~~~~il 335 (513)
T 2wsd_A 258 SNTR-TYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGE-SIILANSAGCGGDVNPETDANIM 335 (513)
T ss_dssp CSSC-CEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTC-EEEEEECCCSSSSCCTTTTTEEE
T ss_pred CCcc-eEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCc-EEEEEecccccccCCCCCCcceE
Confidence 9886 799999999 999999999998 8999999999999999999999986676 44554444442222223446788
Q ss_pred EEcCCCCC-CCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEEeeeecCCCCcc
Q psy978 333 RYEGAPDE-SPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFH 411 (695)
Q Consensus 333 ~Y~~~~~~-~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 411 (695)
+|..+... .+.. .. + +. .+..+..++ . .....++.+.+...+...
T Consensus 336 ~~~~~~~~~~~~~-~~-------------~------p~--~l~~~~~~~--~----~~~~~~~~~~l~~~~~~~------ 381 (513)
T 2wsd_A 336 QFRVTKPLAQKDE-SR-------------K------PK--YLASYPSVQ--H----ERIQNIRTLKLAGTQDEY------ 381 (513)
T ss_dssp EEECCSCCSSCCC-CC-------------C------CS--BCSCCGGGC--C----CCEEEEEEEEEEEEECTT------
T ss_pred EEEeccCcccCcc-CC-------------C------Cc--cccCCCCcc--c----CCCcceEEEEEEeecCCC------
Confidence 88754311 1100 00 0 00 000011100 0 001223444443322110
Q ss_pred cccccccccccccccccccccCCccccCCCCccccccccCCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeC
Q psy978 412 LSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDE 491 (695)
Q Consensus 412 ~~~~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~ 491 (695)
....|.|||++|..|. .+.++.|++|+|+|+|.
T Consensus 382 --------------g~~~~~iNg~~~~~~~---------------------------------~~~~~~g~~~~w~l~N~ 414 (513)
T 2wsd_A 382 --------------GRPVLLLNNKRWHDPV---------------------------------TETPKVGTTEIWSIINP 414 (513)
T ss_dssp --------------SCEEEEETTBCTTSCC---------------------------------CBCCBTTCEEEEEEEEC
T ss_pred --------------CCceEeECCccCCCcc---------------------------------cEecCCCCEEEEEEEcC
Confidence 0113569998874221 24577899999999998
Q ss_pred CCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCC---------CCCccceeEeCCCCEEEEEEEe-
Q psy978 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLK---------DAPLKDTVTVPDGGFTIIRFHA- 561 (695)
Q Consensus 492 ~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~---------~P~~rDTv~Vp~~G~~vIRF~A- 561 (695)
+ .+.||||||||+||||+++.. + ...++..+ .+|+. ++.|||||.|+++++++|+|++
T Consensus 415 ~---~~~HP~HlHG~~F~Vl~~~~~----~---~~~~~~~~--~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~ 482 (513)
T 2wsd_A 415 T---RGTHPIHLHLVSFRVLDRRPF----D---IARYQESG--ELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFG 482 (513)
T ss_dssp S---SSCEEEEESSCCEEEEEEEEB----C---HHHHHHHC--CCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECC
T ss_pred C---CCCcCEeEeCceEEEEEecCc----c---cccccccc--cccccCCCCCCCccccCcccEEEeCCCCEEEEEEEec
Confidence 6 568999999999999998631 1 01112111 12233 3459999999999999999888
Q ss_pred cCceeeEEeecchhhhhcCceEEEEecc
Q psy978 562 TNPGYWLFHCHIEFHVETGMALVFKVGE 589 (695)
Q Consensus 562 dNPG~Wl~HCHi~~H~~~GM~~v~~V~~ 589 (695)
||||.|||||||+||++.|||++|+|.+
T Consensus 483 dnpG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 483 PYSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp SCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred CCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 8999999999999999999999999974
No 13
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=9.8e-77 Score=660.29 Aligned_cols=393 Identities=24% Similarity=0.334 Sum_probs=296.3
Q ss_pred EEEEEcCC-CCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcC-CCee
Q psy978 65 AITVVNRQ-LPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNAD-SPGT 142 (695)
Q Consensus 65 ~~~~iNG~-~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~-~~GT 142 (695)
.+|+|||+ +|||+|+|++||+|+|+|+|+|. ++++|||||+++.. +|||+|+ |||+||++|+|+|++. ++||
T Consensus 26 ~~~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT 99 (448)
T 3aw5_A 26 TASGYMAEGVLNPTIILRRGQRVDMTLKNKLT-EPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGT 99 (448)
T ss_dssp ETTEEEETTEESCEEEEETTCEEEEEEEECSS-SCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEE
T ss_pred EEEEECCccccCceEEEeCCCEEEEEEEECCC-CceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCc
Confidence 34899999 99999999999999999999994 89999999999964 7999998 9999999999999998 7999
Q ss_pred eEEEcc----ccCcCCCCceeEEEEeCCCCCCCCCCCCCCCCCceEEEEeeecccchhhhhhcc--cCCCCCCCCCeeee
Q psy978 143 HFWHSH----TGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAH--HHADGDNKPPTILM 216 (695)
Q Consensus 143 ~wYHsH----~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~dw~~~~~~~~~~~~--~~~~~~~~~~~~lI 216 (695)
|||||| ++.|+.+||+|+|||++++.. ....||. .|++|+|+||+++. .+..... .....+..++.+||
T Consensus 100 ~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~--~~l~~d~--~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~li 174 (448)
T 3aw5_A 100 YLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD--LGFKYGV--NDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLV 174 (448)
T ss_dssp EEEEECCTTTHHHHHHTTCCEEEEEECTTTT--TTCCBTT--TEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEE
T ss_pred eEeccCCCCchHHHHhccceEEEEEeCCccc--cCCCCCC--ceEEEEEEeeccCC-CcccccccccccccCccccEEEE
Confidence 999999 779999999999999987653 1112442 37999999999887 3322100 00112346799999
Q ss_pred CCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEE--cC---cceeEecCCCCccc-eeEEeEEEE
Q psy978 217 NGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSI--AN---HTLTAINSDGGDIK-PISVGSIVS 290 (695)
Q Consensus 217 NG~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i--~g---h~~~Via~DG~~v~-p~~~d~l~l 290 (695)
||+..+ .++|++| +|||||||++... .+.|+| +| |+|+|||+||.+++ |+.++.|.|
T Consensus 175 NG~~~p---------------~~~v~~g-~~RlRliNa~~~~-~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l 237 (448)
T 3aw5_A 175 NGVKDA---------------VFKLSGG-SYRLRLVNGSNAR-LYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFL 237 (448)
T ss_dssp TTEETC---------------EEEEEEE-EEEEEEEECSSSC-CEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEE
T ss_pred CCcccc---------------eEEECCC-eEEEEEEcCCCcc-eEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEE
Confidence 999764 8999999 9999999999987 799999 99 99999999999998 999999999
Q ss_pred cCCceEEEEEEcCCCCcceEEEEeeccCCCc----------ccCCcceEEEEEEcCCCCCCCCCCccCCcccCCccccCC
Q psy978 291 YAGERWDFILNATHHVGNYWIKMRGLMDCDE----------RFTSAYQTAVLRYEGAPDESPAGEVDYDATRTSGTVLNP 360 (695)
Q Consensus 291 ~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~----------~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~l~~ 360 (695)
+|||||||+|++++ +.|||++.....+.. ........++|+|.++... +. | . .+.
T Consensus 238 ~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--p---~------~L~- 302 (448)
T 3aw5_A 238 APAERAEVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEA-VP--V---E------ALS- 302 (448)
T ss_dssp CTTCEEEEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCC-CC--C---C------CCS-
T ss_pred CCcceEEEEEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCC-CC--c---c------ccC-
Confidence 99999999999983 689999875543211 0112345778888754321 10 0 0 000
Q ss_pred CCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEEeeeecCCCCcccccccccccccccccccccccCCccccCC
Q psy978 361 LNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFP 440 (695)
Q Consensus 361 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~iN~~s~~~P 440 (695)
.+.. . .+....++++.+..+ ...|.|||++|..+
T Consensus 303 --------------~lp~----~---~~~~~~~~~~~l~~~-------------------------~~~~~iNg~~~~~~ 336 (448)
T 3aw5_A 303 --------------DPPP----E---PPKPTRTRRFALSLS-------------------------GMQWTINGMFWNAS 336 (448)
T ss_dssp --------------CCCC----C---CCCCSEEEEEEEEEE-------------------------TTEEEETTBCCCTT
T ss_pred --------------CCCC----C---CCCCCceEEEEEeCC-------------------------CceeeECCCcCCCC
Confidence 0110 0 112234455554321 01478999998632
Q ss_pred CCccccccccCCccccccCCccCCCCCCCcccceeee-eCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCcc
Q psy978 441 TFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVN-VPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKN 519 (695)
Q Consensus 441 ~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~ 519 (695)
. | .+. ++.|++|+|+|+|.+. .+.||||||||+||||+++ |..
T Consensus 337 ~-p-------------------------------~~~~~~~g~~v~~~i~N~~~--~~~HP~HLHG~~F~Vl~~~--G~~ 380 (448)
T 3aw5_A 337 N-P-------------------------------LFEHVSVEGVELWEIVNDKA--SMPHPMHLHGFPMWIIERK--DSP 380 (448)
T ss_dssp C-T-------------------------------TCCCEEECEEEEEEEEECSS--SCCEEEEESSSCBEEEEEE--SCC
T ss_pred C-C-------------------------------ceeccCCCCeEEEEEEcCCC--CCCcCEEECCceEEEEEec--CCC
Confidence 1 1 134 7889999999999751 4689999999999999984 321
Q ss_pred ccccchhcccccccccCCCCCCCccceeEeCCCCEEEE--EEE---ecCceeeEEeecchhhhhcCceEEEEec
Q psy978 520 ITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTII--RFH---ATNPGYWLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 520 ~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~~vI--RF~---AdNPG~Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
...++...+ ....+..+|.|||||.||++|+++| ||+ |||| |||||||+||++.|||++|+|.
T Consensus 381 ~~~~~~~~~----~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 381 RQVAELAVD----NRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp HHHHTTCCS----TTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred ccccccccc----ccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 111111100 0112234557999999999999955 599 9999 9999999999999999999983
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=8.3e-76 Score=680.60 Aligned_cols=460 Identities=16% Similarity=0.181 Sum_probs=290.4
Q ss_pred eCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCC----------------------------------------
Q psy978 57 IPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLME---------------------------------------- 96 (695)
Q Consensus 57 ~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~---------------------------------------- 96 (695)
+.+|+....+|+|||++|||+|+|++||+|+|+|+|+|+.
T Consensus 46 ~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (612)
T 3gyr_A 46 LHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALP 125 (612)
T ss_dssp SCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCC
T ss_pred ecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccCC
Confidence 4567778899999999999999999999999999999942
Q ss_pred CCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCC-CeeeEEEccc----cCcCCCCceeEEEEeCCCCCCC
Q psy978 97 ESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADS-PGTHFWHSHT----GSQRGDGSFGAFIIRKPRPREV 171 (695)
Q Consensus 97 ~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~-~GT~wYHsH~----~~q~~~Gl~G~lIV~~~~~~~p 171 (695)
+.|+|||||+++.+ +|||++ ||||+||++|+|+|++++ +||||||||. +.|+.+||+|+|||+++++...
T Consensus 126 ~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~~ 200 (612)
T 3gyr_A 126 AWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDAL 200 (612)
T ss_dssp CCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTT
T ss_pred CCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCcccccc
Confidence 34789999999854 799865 999999999999999976 6999999996 5899999999999998765332
Q ss_pred CCCCCCCCCCceEEEEeeecccchhhhhhcc-----------c------CCCCCCCCCeeeeCCCCCCcccCCCCCcCCC
Q psy978 172 HAPLYDFDLPEHIMLITDWSHVLGVEMFNAH-----------H------HADGDNKPPTILMNGKGRFKEFRSNATVTYT 234 (695)
Q Consensus 172 ~~~~~d~d~~e~~l~l~dw~~~~~~~~~~~~-----------~------~~~~~~~~~~~lING~~~~~~~~~~~~~~~~ 234 (695)
... ..|. |++|+|+||+++...+..... . ....+..++.++|||+..+
T Consensus 201 ~~p--~~d~-e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~p------------ 265 (612)
T 3gyr_A 201 GLP--SGDR-EIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIWP------------ 265 (612)
T ss_dssp TCC--CGGG-EEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEESC------------
T ss_pred CCC--CCCc-cEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCccc------------
Confidence 211 2333 799999999876543221110 0 0111245688999999654
Q ss_pred CceeEEEecCcEEEEEEEeCCCCCccEEEEEcCc-------ceeEecCCCCcc-ceeEE------eEEEEcCCceEEEEE
Q psy978 235 PMEVFTVKQGHSYRFRIINAGYLNCPIELSIANH-------TLTAINSDGGDI-KPISV------GSIVSYAGERWDFIL 300 (695)
Q Consensus 235 ~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh-------~~~Via~DG~~v-~p~~~------d~l~l~pGeR~dVlv 300 (695)
.+.|+. ++|||||||+++.+ .+.|+|++| +|+|||+||.++ +|+.+ +.|.|+|||||||||
T Consensus 266 ---~~~v~~-~~yRlRliNas~~~-~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV 340 (612)
T 3gyr_A 266 ---YADVDD-GWYRLRLVNASNAR-IYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLV 340 (612)
T ss_dssp ---EEEEES-SEEEEEEEECCSSC-CEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEE
T ss_pred ---eEeccC-cEEEEEEEeccCCc-ceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEE
Confidence 677765 68999999999987 799999998 499999999998 46655 479999999999999
Q ss_pred EcCCCCcceEEEEeecc-CCCcc---cCCcceEEEEEEcCCCCCCC--CCCccCCcccCCccccCCCCCCcCCCcccccc
Q psy978 301 NATHHVGNYWIKMRGLM-DCDER---FTSAYQTAVLRYEGAPDESP--AGEVDYDATRTSGTVLNPLNTPSRQAKSTLIS 374 (695)
Q Consensus 301 ~a~~~~g~Y~Ir~~~~~-~~~~~---~~~~~~~ail~Y~~~~~~~p--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 374 (695)
++++..+.+++...... .+... .......++++|.......+ ...+....... .... ...+......
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-----~~~~--~~~~~~~~~~ 413 (612)
T 3gyr_A 341 DFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSF-----RRMS--HDIPHGHRLI 413 (612)
T ss_dssp ECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSC-----CCCC--TTSCCEEEEE
T ss_pred ECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccc-----cccc--cccccccccc
Confidence 99998776554332221 11110 01122345555553222111 11111000000 0000 0000000000
Q ss_pred cccccCCCCCCCccccCCceEEEEEEeeeecCCCCcccccccccccccccccccccccCCccccCCCCccccccccCCcc
Q psy978 375 ELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDES 454 (695)
Q Consensus 375 ~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~ 454 (695)
.+... ... ........+.+. .. .+...+..+....+... .....
T Consensus 414 ~~~~~---~~~--~~~~~~~~~~~~----~~--------------------------~~~~~~~~~~~~~~~~~-~~~~~ 457 (612)
T 3gyr_A 414 VLTPP---GTK--GSGGHPEIWEMA----EV--------------------------EDPADVQVPAEGVIQVT-GADGR 457 (612)
T ss_dssp EEECT---TCT--TTTTCCEEEEEE----EC--------------------------C-----CCSCTTEEEEE-CTTSC
T ss_pred ccccc---ccc--cccccccccccc----cc--------------------------cccccccccccceeeec-cCCCc
Confidence 00000 000 000000000000 00 00000001100000000 00000
Q ss_pred ccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCcc-cccc-----chhcc
Q psy978 455 TFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKN-ITRQ-----DVIDM 528 (695)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~-~~~~-----~~~~~ 528 (695)
... ...+.........+.+++|++|+|+|+|.+ .+.||||||||+||||+++..... .+.. .....
T Consensus 458 ~~~-----~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~ 529 (612)
T 3gyr_A 458 TKT-----YRRTARTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRL 529 (612)
T ss_dssp EEE-----EEEEECSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEE
T ss_pred ccc-----ccccCccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCcccccccccccccccc
Confidence 000 000001111234578999999999999987 678999999999999987632111 0000 00111
Q ss_pred cccccccCCCCCCCccceeEeCCCCEEEEEEE-ecCceeeEEeecchhhhhcCceEEEEeccCCC
Q psy978 529 DAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFH-ATNPGYWLFHCHIEFHVETGMALVFKVGEHED 592 (695)
Q Consensus 529 ~~~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~-AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~~~~ 592 (695)
+.......+..++.|||||.||++||++|||+ +||||.|||||||++|++.|||+.|+|.+++.
T Consensus 530 ~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 530 DPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp EEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred ccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 12223445677899999999999999999998 89999999999999999999999999986543
No 15
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.3e-74 Score=644.82 Aligned_cols=418 Identities=22% Similarity=0.311 Sum_probs=303.6
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceE
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSI 101 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~si 101 (695)
+.+.+|+++++.... .-.+|.++.+|+|||++|||+|+|++||+|+|+|+|+| .++|+|
T Consensus 48 ~~~~~~~L~~~~~~~--------------------~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l-~~~tsi 106 (481)
T 3zx1_A 48 KNIFHATLEIKENHI--------------------ELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKL-KEATTI 106 (481)
T ss_dssp TTEEEEEEEEEEEEE--------------------CCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECS-SSCBCC
T ss_pred CCeEEEEEEEEEEEE--------------------EccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCC-CCCeeE
Confidence 688999999998542 12478999999999999999999999999999999999 589999
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCC--CeeeEEEccc----cCcCCCCceeEEEEeCCCCCCCCCCC
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADS--PGTHFWHSHT----GSQRGDGSFGAFIIRKPRPREVHAPL 175 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~--~GT~wYHsH~----~~q~~~Gl~G~lIV~~~~~~~p~~~~ 175 (695)
||||+++. ++|||+| ||||+||++|+|+|++.+ +||||||||. +.|+.+||+|+|||+++++. .
T Consensus 107 HwHGl~~~--~~~DG~p---q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~-----~ 176 (481)
T 3zx1_A 107 HWHGVPVP--PDQDGSP---HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDA-----L 176 (481)
T ss_dssp EEETCCCC--GGGSCCT---TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCT-----T
T ss_pred EecCcccC--CccCCCc---cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCcccc-----c
Confidence 99999985 4899986 999999999999999976 8999999996 58999999999999987642 1
Q ss_pred CCCCCCceEEEEeeecccchhhhhhcc-cCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeC
Q psy978 176 YDFDLPEHIMLITDWSHVLGVEMFNAH-HHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINA 254 (695)
Q Consensus 176 ~d~d~~e~~l~l~dw~~~~~~~~~~~~-~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa 254 (695)
++.+ +..|+|+||+++...+..... .....+..++.+||||+..+ .++|++|+ ||||||+
T Consensus 177 ~~~~--~~~l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~~p---------------~l~v~~g~--RlRliNa 237 (481)
T 3zx1_A 177 SHLK--EKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKP---------------KIKLATNE--RIRIYNA 237 (481)
T ss_dssp TTSE--EEEEEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEESC---------------EEEEETTE--EEEEEEC
T ss_pred cCCC--ceeEEEEEEeccCCCccccccchhhccCCcCCEEEECCccCc---------------eEEecCCC--EEEEEec
Confidence 3444 345999999987543221000 00012346789999999654 89999999 9999999
Q ss_pred CCCCccEEEEEcCcceeEecCCCCcc-ceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcc---cCCcceEE
Q psy978 255 GYLNCPIELSIANHTLTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDER---FTSAYQTA 330 (695)
Q Consensus 255 ~~~~~~~~~~i~gh~~~Via~DG~~v-~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~---~~~~~~~a 330 (695)
+... .+.|+|+||+|+||++||.++ +|+.++.|.|+|||||||+|++++ .+.|.|........... .......+
T Consensus 238 ~~~~-~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~ 315 (481)
T 3zx1_A 238 TAAR-YLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLA 315 (481)
T ss_dssp CSSC-CEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEE
T ss_pred CCCe-EEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEE
Confidence 9987 799999999999999997665 899999999999999999999986 46788765322211000 01112233
Q ss_pred EEEEcCCCCCCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEEeeeecCCCCc
Q psy978 331 VLRYEGAPDESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHF 410 (695)
Q Consensus 331 il~Y~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~ 410 (695)
.+++.+... ..|. .+..+..++ ....++++.++.+. .+-.
T Consensus 316 ~~~~~~~~~----~lP~------------------------~l~~~~~~~--------~~~~~r~~~l~~~~--~~~~-- 355 (481)
T 3zx1_A 316 NINLKKENV----ELPK------------------------NLKIFKPSE--------EPKEFKEIIMSEDH--MQMH-- 355 (481)
T ss_dssp EEEEECCCC----CCCS------------------------CSCCCCCCC--------CCCEEEEEEEEECC--STTT--
T ss_pred EEecCCCCc----cCCc------------------------cccCCCCCC--------CCCcEEEEEEeccc--hhcc--
Confidence 333332110 0000 000011111 01123333333211 0000
Q ss_pred ccccccccccccccc----cccccccCCccccCCCCccccccccCCccccccCCccCCCCCCCcccceeeeeCCCCEEEE
Q psy978 411 HLSTLYGFDEVKRLE----KVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVEL 486 (695)
Q Consensus 411 ~~~~~~g~~~~~~~~----~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVei 486 (695)
++......+ ....|.|||+.|.. . ...+.++.|++|+|
T Consensus 356 ------~~~~~~~~~~~~~~~~~~~iNG~~~~~-~-------------------------------~~~~~~~~G~~v~w 397 (481)
T 3zx1_A 356 ------GMMGKSEGELKIALASMFLINRKSYDL-K-------------------------------RIDLSSKLGVVEDW 397 (481)
T ss_dssp ------TGGGCCHHHHHHHHHTTEEETTBCCCT-T-------------------------------CCCEEEETTCCEEE
T ss_pred ------cccccccccccccccceeEECCEeCCC-C-------------------------------CceEEeCCCCEEEE
Confidence 000000000 00137889887741 1 12377899999999
Q ss_pred EEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCEEEEEEEecCcee
Q psy978 487 IIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGY 566 (695)
Q Consensus 487 vl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~AdNPG~ 566 (695)
+|.|.+ .+.|||||||+.|||++++..|... ....+.|||||.|+|+++++|+|+|||||.
T Consensus 398 ~l~N~~---~~~Hp~HlHG~~F~vl~~~~~g~~~----------------~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~ 458 (481)
T 3zx1_A 398 IVINKS---HMDHPFHIHGTQFELISSKLNGKVQ----------------KAEFRALRDTINVRPNEELRLRMKQDFKGL 458 (481)
T ss_dssp EEEECS---SSCEEEEETTCCEEEEEEEETTEEE----------------ECSSCCEESEEEECTTCEEEEEECCCSCEE
T ss_pred EEEcCC---CCceeEEEeccEEEEEEecccCCCC----------------CcccCcccceEEECCCCEEEEEEEcCCCee
Confidence 999976 6799999999999999873222111 122467999999999999999999999999
Q ss_pred eEEeecchhhhhcCceEEEEec
Q psy978 567 WLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 567 Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
||||||+++|++.|||..|+|.
T Consensus 459 w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 459 RMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EEEEESSHHHHHTTCEEEEEEE
T ss_pred EEEEcCChHHHhcCCceEEEEe
Confidence 9999999999999999999986
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.7e-72 Score=626.03 Aligned_cols=431 Identities=23% Similarity=0.300 Sum_probs=299.1
Q ss_pred eEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEee
Q psy978 24 TCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHW 103 (695)
Q Consensus 24 ~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~ 103 (695)
...|+|+++.... ..+|.++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++++|||
T Consensus 17 ~~~~~l~~~~~~~---------------------~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHw 74 (488)
T 3od3_A 17 RNRIQLTIGAGQS---------------------TFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT-EETTLHW 74 (488)
T ss_dssp TSEEEEEEEEEEE---------------------EETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSS-SCBCCEE
T ss_pred CeeEEEEEEEEEE---------------------ccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCc-CceeEee
Confidence 4569999987542 33899999999999999999999999999999999994 8999999
Q ss_pred CCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCC-CeeeEEEccc----cCcCCCCceeEEEEeCCCCCC-CCCCCCC
Q psy978 104 HGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADS-PGTHFWHSHT----GSQRGDGSFGAFIIRKPRPRE-VHAPLYD 177 (695)
Q Consensus 104 HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~-~GT~wYHsH~----~~q~~~Gl~G~lIV~~~~~~~-p~~~~~d 177 (695)
||+++.+ ++||+| ||+|+||++|+|+|++++ +||||||||. +.|+.+||+|+|||+++.+.. +....|+
T Consensus 75 HG~~~~~--~~DG~p---~~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~ 149 (488)
T 3od3_A 75 HGLEVPG--EVDGGP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWG 149 (488)
T ss_dssp ETCCCCH--HHHCCT---TCCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBT
T ss_pred cccccCc--ccCCCC---cCcCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCC
Confidence 9999975 699987 999999999999999986 7999999996 579999999999999875422 1223344
Q ss_pred CCCCceEEEEeeecccchhhhhhccc--CCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCC
Q psy978 178 FDLPEHIMLITDWSHVLGVEMFNAHH--HADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAG 255 (695)
Q Consensus 178 ~d~~e~~l~l~dw~~~~~~~~~~~~~--~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~ 255 (695)
.| |++|+|+||+++...+...... ....+..++.+||||+..+ .+.+ +|++|||||||++
T Consensus 150 ~~--d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~p---------------~~~v-~g~~~RlRliNas 211 (488)
T 3od3_A 150 ID--DVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYP---------------QHAA-PRGWLRLRLLNGC 211 (488)
T ss_dssp TT--EEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBSSC---------------EEEE-EEEEEEEEEEECC
T ss_pred cc--ceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCcCc---------------cEec-CCCEEEEEEEccC
Confidence 44 7999999999865433211100 0012346789999999764 4555 6789999999999
Q ss_pred CCCccEEEEE-cCcceeEecCCCCcc-ceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCc---ccCCcceEE
Q psy978 256 YLNCPIELSI-ANHTLTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDE---RFTSAYQTA 330 (695)
Q Consensus 256 ~~~~~~~~~i-~gh~~~Via~DG~~v-~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~---~~~~~~~~a 330 (695)
+.. .+.|+| +||+|+|||+||.++ +|+.+++|.|+|||||||+|++++ .+.|+|+......... .|.. ...
T Consensus 212 ~~~-~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~--~~~ 287 (488)
T 3od3_A 212 NAR-SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDK--PHP 287 (488)
T ss_dssp SSC-CEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTTS--CEE
T ss_pred CCc-eeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccccC--ccc
Confidence 886 799999 699999999999986 899999999999999999999996 4788887643221100 0111 122
Q ss_pred EEEEcCCCCCCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEEeeee------
Q psy978 331 VLRYEGAPDESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYE------ 404 (695)
Q Consensus 331 il~Y~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~------ 404 (695)
+++........+...|. .+..+..++ .+....++++.+.++...
T Consensus 288 ~~~~~~~~~~~~~~~P~------------------------~L~~~~~~~------~~~~~~~r~~~l~~~~~~~~~~~~ 337 (488)
T 3od3_A 288 VMRIQPIAISASGALPD------------------------TLSSLPALP------SLEGLTVRKLQLSMDPMLDMMGMQ 337 (488)
T ss_dssp EEEEEEEEEECCCCCCS------------------------CCCCCCCCC------CCTTCCEEEEEEEECHHHHHHHHH
T ss_pred eeEecccccCCCCCCCc------------------------ccccCCCCc------ccccccceEEEEEecccccccccc
Confidence 22222100000000000 000011100 111223455555442100
Q ss_pred -------c-CCCCcc-----cccccc-ccccccccccc----ccccCCccccCCCCccccccccCCccccccCCccCCCC
Q psy978 405 -------I-DNPHFH-----LSTLYG-FDEVKRLEKVR----TPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCA 466 (695)
Q Consensus 405 -------~-~~~~~~-----~~~~~g-~~~~~~~~~~~----~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~ 466 (695)
. .-..+. ....-| +.... .+..+ .|.|||++|...
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~g~~~~~~~~~~ING~~~~~~-------------------------- 390 (488)
T 3od3_A 338 MLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMN-HGGKFDFHHANKINGQAFDMN-------------------------- 390 (488)
T ss_dssp HHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSC-CCGGGCGGGCEEETTBCCCTT--------------------------
T ss_pred cccccccccccccccccccccccccCcccccc-ccccccccceeeECCeeCCCC--------------------------
Confidence 0 000000 000000 00000 00011 257888887421
Q ss_pred CCCcccceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccce
Q psy978 467 DSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDT 546 (695)
Q Consensus 467 ~~~~~~~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDT 546 (695)
...+.++.|++|+|.|.|.+. .+.|||||||+.|+|++++ |.... ...+.||||
T Consensus 391 ------~~~~~~~~G~~e~w~l~N~~~--~~~Hp~HlHg~~F~Vl~~~--g~~~~----------------~~~~~~kDT 444 (488)
T 3od3_A 391 ------KPMFAAAKGQYERWVISGVGD--MMLHPFHIHGTQFRILSEN--GKPPA----------------AHRAGWKDT 444 (488)
T ss_dssp ------CCSEECCBSSCEEEEEECTTC--CCCEEEEETTCCBEEEEBT--TBCCC----------------GGGSSSBSE
T ss_pred ------CCceEcCCCCEEEEEEEeCCC--CCCccEEEcCceEEEeccC--CCccc----------------cccCCceeE
Confidence 113678999999999999862 3589999999999999864 32111 113459999
Q ss_pred eEeCCCCEEEEEEEe----cCceeeEEeecchhhhhcCceEEEEe
Q psy978 547 VTVPDGGFTIIRFHA----TNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 547 v~Vp~~G~~vIRF~A----dNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
|.|+ |+.+.|+|++ +|||.||||||++.|++.|||..|.|
T Consensus 445 V~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 445 VKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp EEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred EEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 9999 9999999997 46789999999999999999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=2.1e-70 Score=625.48 Aligned_cols=470 Identities=17% Similarity=0.217 Sum_probs=306.4
Q ss_pred ceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCC-----
Q psy978 23 RTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEE----- 97 (695)
Q Consensus 23 ~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~----- 97 (695)
.+.+|++++..... .+.+|+.++.+|+|||++|||+|+|++||+|+|+|+|+|+..
T Consensus 31 ~~~~~~l~~~~~~~-------------------~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~ 91 (612)
T 2g23_A 31 VTRETEIALRPTWV-------------------RLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPV 91 (612)
T ss_dssp TTBCEEEEEEEEEE-------------------CSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSE
T ss_pred CeEEEEEEEEEEEE-------------------EECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccc
Confidence 35678898887542 134566799999999999999999999999999999999632
Q ss_pred -----------------------------------CceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcC-CCe
Q psy978 98 -----------------------------------STSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNAD-SPG 141 (695)
Q Consensus 98 -----------------------------------~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~-~~G 141 (695)
+++|||||+++.+ .+||+| ||+|+||++|+|+|++. ++|
T Consensus 92 ~~~~~p~~~~g~p~~~~~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~--~~DG~p---~~~i~PG~s~~Y~f~~~~~aG 166 (612)
T 2g23_A 92 TSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQAT 166 (612)
T ss_dssp EEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSC
T ss_pred cccccccccCCCcccccccccccccccccccccCCceEEEcCCCCCCC--ccCCCC---cCCCCCCCeEEEEEEecCCCc
Confidence 2899999999976 499986 99999999999999996 699
Q ss_pred eeEEEccccC----cCCCCceeEEEEeCCCCCCCCCCCCCCCCCceEEEEeeecccchhh------hhhc-----ccCCC
Q psy978 142 THFWHSHTGS----QRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVE------MFNA-----HHHAD 206 (695)
Q Consensus 142 T~wYHsH~~~----q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~dw~~~~~~~------~~~~-----~~~~~ 206 (695)
|||||||... |+.+||+|+|||+++++.......+ |. |++|+|+||+++...+ .... .....
T Consensus 167 T~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~--d~-d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~ 243 (612)
T 2g23_A 167 QWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSG--DR-EIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPE 243 (612)
T ss_dssp EEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCG--GG-EEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSS
T ss_pred eEEEecccCCcchhhhhccceeEEEEcCcccccccCCCC--cc-eEEEEEEEEeccCCcccccccccccccccccccccc
Confidence 9999999864 9999999999999865422111123 33 6999999999975321 1000 00001
Q ss_pred ------CCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCc-------ceeEe
Q psy978 207 ------GDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANH-------TLTAI 273 (695)
Q Consensus 207 ------~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh-------~~~Vi 273 (695)
.+..++.+||||+..+ .++|++| +|||||||+++.+ .+.|+|++| +|+||
T Consensus 244 ~g~p~~~~~~gd~~lVNG~~~p---------------~~~V~~g-~yRlRliNas~~r-~~~l~i~~h~g~~~~~~~~vI 306 (612)
T 2g23_A 244 TGKPVSIPFFGPYTTVNGRIWP---------------YADVDDG-WYRLRLVNASNAR-IYNLVLIDEDDRPVPGVVHQI 306 (612)
T ss_dssp SSCCEECCCCCSEEEETTEESC---------------EEEEESS-EEEEEEEECCSSC-CEEEEEECTTSCBCTTSEEEE
T ss_pred cCcccccCCcCCEEEECCccCC---------------eEEecCC-eEEEEEEecCCCe-EEEEEEcCCCCccCCCcEEEE
Confidence 1246799999999764 8999999 9999999999987 799999999 89999
Q ss_pred cCCCCcc-ceeEEe------EEEEcCCceEEEEEEcCCCCc-ceEEEEeeccCCCcc---c--CCcceEEEEEEcCCCCC
Q psy978 274 NSDGGDI-KPISVG------SIVSYAGERWDFILNATHHVG-NYWIKMRGLMDCDER---F--TSAYQTAVLRYEGAPDE 340 (695)
Q Consensus 274 a~DG~~v-~p~~~d------~l~l~pGeR~dVlv~a~~~~g-~Y~Ir~~~~~~~~~~---~--~~~~~~ail~Y~~~~~~ 340 (695)
|+||.++ +|+.++ .|.|+|||||||+|++++.+| +|+|+.......... . .......-+++......
T Consensus 307 a~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~ 386 (612)
T 2g23_A 307 GSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEE 386 (612)
T ss_dssp EETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCC
T ss_pred EeCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCC
Confidence 9999999 599999 999999999999999998655 688775432110000 0 00112333444432211
Q ss_pred CCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEEeeeecCCCCccccccccccc
Q psy978 341 SPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGFDE 420 (695)
Q Consensus 341 ~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~g~~~ 420 (695)
.+...|.. ... ....+.. ..+... .+..+.++...... .....+.+. .......-.-...+...
T Consensus 387 ~~~~~P~~---L~~--~~~~l~~--~~~~~~---r~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~ 450 (612)
T 2g23_A 387 DSFALPEV---LSG--SFRRMSH--DIPHGH---RLIVLTPPGTKGSG--GHPEIWEMA----EVEDPADVQVPAEGVIQ 450 (612)
T ss_dssp CCCCCCSS---CCS--SCCCCCT--TSCCEE---EEEEECCTTCTTST--TCCCEEEEE----EEC-----CCSCTTEEE
T ss_pred CCCCCChh---hcc--ccccCCc--ccccce---eEEeeccccccccc--cccceeecc----cccccccccccccccee
Confidence 11111100 000 0000000 000000 00000000000000 000011110 00000000000000000
Q ss_pred c-cccccccccccCCccccCCCCccccccccCCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeCCCCCCCCC
Q psy978 421 V-KRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVAYDANH 499 (695)
Q Consensus 421 ~-~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~~~~~H 499 (695)
. ...+....+.|||+.|.. ...+.++.|++|+|.|+|.+ .+.|
T Consensus 451 ~~~~~g~~~~~~iNG~~~~~---------------------------------~~~~~v~~G~~v~w~l~N~~---~~~H 494 (612)
T 2g23_A 451 VTGADGRTKTYRRTAATFND---------------------------------GLGFTIGEGTHEQWTFLNLS---PILH 494 (612)
T ss_dssp EECTTSCEEEEEEEECSTTS---------------------------------CCCEEEETTCEEEEEEEECS---SSCE
T ss_pred eeccCCceeEEEECCccCCC---------------------------------CCceEecCCCEEEEEEEeCC---CCCC
Confidence 0 112223345677766531 12478899999999999987 5789
Q ss_pred ceeecCCCeEEEEEcccCcccc-ccch-------hcccccccccCCCCCCCccceeEeCCCCEEEEEEEec-CceeeEEe
Q psy978 500 PFHLHGHPFRVVAMERVAKNIT-RQDV-------IDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHAT-NPGYWLFH 570 (695)
Q Consensus 500 PfHLHG~~F~Vv~~g~~g~~~~-~~~~-------~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~Ad-NPG~Wl~H 570 (695)
||||||+.|||++++.. +++ .+.. ..+........+..++.|||||.|+++++++|+|+|+ |||.||||
T Consensus 495 PiHlHg~~F~Vl~r~~~--~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~H 572 (612)
T 2g23_A 495 PMHIHLADFQVLGRDAY--DASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYH 572 (612)
T ss_dssp EEEESSCCEEEEEEEEE--ECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEE
T ss_pred CeEEcCceEEEecccCc--ccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEE
Confidence 99999999999987521 111 0000 0000000123455667799999999999999999999 99999999
Q ss_pred ecchhhhhcCceEEEEeccC
Q psy978 571 CHIEFHVETGMALVFKVGEH 590 (695)
Q Consensus 571 CHi~~H~~~GM~~v~~V~~~ 590 (695)
|||++|++.|||..|+|...
T Consensus 573 CHil~Hed~GMm~~f~V~p~ 592 (612)
T 2g23_A 573 CHLLEHEDMGMMRPFVVMPP 592 (612)
T ss_dssp ESSHHHHTTTCEEEEEEECH
T ss_pred eCchhHhhcCCceEEEECch
Confidence 99999999999999999653
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.6e-50 Score=430.14 Aligned_cols=273 Identities=26% Similarity=0.373 Sum_probs=222.3
Q ss_pred ceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEe
Q psy978 23 RTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIH 102 (695)
Q Consensus 23 ~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH 102 (695)
.+++|+|+++.... ...+|.++.+|+|||++|||+|+|++||+|+|+|+|.+ ..+++||
T Consensus 1 ~~~~~~l~~~~~~~--------------------~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l-~~~~siH 59 (318)
T 3g5w_A 1 EKREFDLSIEDTRI--------------------VLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMT-TLPHTIH 59 (318)
T ss_dssp CEEEEEEEEEEEEE--------------------EEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECS-SSCBCCE
T ss_pred CeEEEEEEEEEEEE--------------------EcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCC-CCceeEE
Confidence 37889999988542 12468899999999999999999999999999999999 5899999
Q ss_pred eCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcC---CCCceeEEEEeCCCCCCCCCCCCCCC
Q psy978 103 WHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQR---GDGSFGAFIIRKPRPREVHAPLYDFD 179 (695)
Q Consensus 103 ~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~---~~Gl~G~lIV~~~~~~~p~~~~~d~d 179 (695)
|||+++.+++++||+|++|||+|+||++++|+|+++++||||||||...+. .+||+|+|||++++... ...++|
T Consensus 60 ~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~---~~~~~d 136 (318)
T 3g5w_A 60 WHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLP---IEKTVT 136 (318)
T ss_dssp EETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCH---HHHTCC
T ss_pred ecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCCCccc---cccccc
Confidence 999999988899999999999999999999999999999999999987554 48999999999764321 111344
Q ss_pred CCceEEEEeeecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCc
Q psy978 180 LPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNC 259 (695)
Q Consensus 180 ~~e~~l~l~dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~ 259 (695)
. |++|+|+||+++..... .........++.++|||+..+.. ..++|++|++|||||+|++..
T Consensus 137 ~-e~~l~l~dw~~~~~~~~---~~~~~~~~~~d~~~ING~~~~~~------------~~l~v~~G~~vrlrliN~~~~-- 198 (318)
T 3g5w_A 137 K-DYILMLSDWVSSWANKP---GEGGIPGDVFDYYTINAKSFPET------------QPIRVKKGDVIRLRLIGAGDH-- 198 (318)
T ss_dssp E-EEEEEEEEECGGGTTCT---TCCCCTTCCCCEEEETTBCBTSS------------CCEEECTTCEEEEEEEECSSS--
T ss_pred c-eeEEEEEeecccccccc---ccCCCCCCcCcEEEEcCcCCCCC------------ccEEeCCCCEEEEEEEeCCCc--
Confidence 4 79999999998653221 01111224678999999976521 358999999999999999975
Q ss_pred cEEEEEcCcceeEecCCCCcc-ceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcc-cCCcceEEEEEEcCC
Q psy978 260 PIELSIANHTLTAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDER-FTSAYQTAVLRYEGA 337 (695)
Q Consensus 260 ~~~~~i~gh~~~Via~DG~~v-~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~-~~~~~~~ail~Y~~~ 337 (695)
.+.|||+||.|+||+.||.++ +|..+|+|.|.||||+||+++++++ |.|.+..+.......+ .......++|+|++.
T Consensus 199 ~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~~p-G~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 199 VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNP-GLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCSC-SEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred eEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECCCC-eeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 478999999999999999998 7999999999999999999999975 9999998765443211 001234788999876
Q ss_pred C
Q psy978 338 P 338 (695)
Q Consensus 338 ~ 338 (695)
+
T Consensus 278 ~ 278 (318)
T 3g5w_A 278 G 278 (318)
T ss_dssp C
T ss_pred C
Confidence 5
No 19
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1.7e-49 Score=426.55 Aligned_cols=273 Identities=27% Similarity=0.430 Sum_probs=221.2
Q ss_pred ceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEe
Q psy978 23 RTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIH 102 (695)
Q Consensus 23 ~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH 102 (695)
++.+|+|++++... ...||+++.+|+|||++|||+|+|++||+|+|+|+|.+ ..+++||
T Consensus 2 ~~~~~~l~~~~~~~--------------------~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l-~~~~siH 60 (339)
T 2zwn_A 2 AEREFDMTIEEVTI--------------------KVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNT-SLPHTIH 60 (339)
T ss_dssp CEEEEEEEEEEEEE--------------------EEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEES-SSCBCCE
T ss_pred ceEEEEEEEEEEEE--------------------EcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECC-CCCccEE
Confidence 46789999988542 12368999999999999999999999999999999999 5899999
Q ss_pred eCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccC--cCC-CCceeEEEEeCCCCCCCCCCCCCCC
Q psy978 103 WHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGS--QRG-DGSFGAFIIRKPRPREVHAPLYDFD 179 (695)
Q Consensus 103 ~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~--q~~-~Gl~G~lIV~~~~~~~p~~~~~d~d 179 (695)
|||+++.+++||||+|++|||+|+||++|+|+|+++++||||||||... |+. +||+|+|||+++.... ...+.|
T Consensus 61 ~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~---~~~~~d 137 (339)
T 2zwn_A 61 WHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLP---IEKRVT 137 (339)
T ss_dssp EETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCT---TGGGCS
T ss_pred eCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCchhhhhcCCceEeEEecCCCccc---ccccCC
Confidence 9999999999999999999999999999999999999999999999875 787 9999999999754321 112234
Q ss_pred CCceEEEEeeecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCc
Q psy978 180 LPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNC 259 (695)
Q Consensus 180 ~~e~~l~l~dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~ 259 (695)
. |++|+|+||++...... .........++.++|||+..+.. ..+.|++|++|||||+|++..
T Consensus 138 ~-e~~l~l~d~~~~~~~~~---~~~g~~~~~~~~~~ING~~~~~~------------~~~~v~~G~~vrlrliN~~~~-- 199 (339)
T 2zwn_A 138 K-DVIMMMSTWESAVADKY---GEGGTPMNVADYFSVNAKSFPLT------------QPLRVKKGDVVKIRFFGAGGG-- 199 (339)
T ss_dssp E-EEEEEEEEECGGGTTCT---TCCCSTTSCCCEEEETTBCTTSS------------CCEEECTTCEEEEEEEECSSS--
T ss_pred c-eEEEEeeheeccccccc---CCCCCCccccceEEEccccCCCc------------ccEEECCCCEEEEEEEeCCCc--
Confidence 3 78999999997432111 00011112578899999965411 368999999999999999954
Q ss_pred cEEEEEcCcceeEecCCCCccc-eeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCccc-CCcceEEEEEEcCC
Q psy978 260 PIELSIANHTLTAINSDGGDIK-PISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERF-TSAYQTAVLRYEGA 337 (695)
Q Consensus 260 ~~~~~i~gh~~~Via~DG~~v~-p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~-~~~~~~ail~Y~~~ 337 (695)
.+.|||+||.|+||+.||.+++ |..+|++.|.||||+||+++++++ |.|+++++....+.... ......++|+|++.
T Consensus 200 ~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~~p-G~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 200 IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADNP-GRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCSC-SEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeCCC-eeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 6889999999999999999986 889999999999999999999976 88888887654322111 12334789999875
Q ss_pred C
Q psy978 338 P 338 (695)
Q Consensus 338 ~ 338 (695)
.
T Consensus 279 ~ 279 (339)
T 2zwn_A 279 P 279 (339)
T ss_dssp C
T ss_pred C
Confidence 4
No 20
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.8e-49 Score=481.93 Aligned_cols=252 Identities=17% Similarity=0.231 Sum_probs=194.8
Q ss_pred CCCceEEEE-------EEcCC--------CCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccC----CCCCCCCCCC
Q psy978 59 ADGVKRAIT-------VVNRQ--------LPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQV----DSPYMDGVPH 119 (695)
Q Consensus 59 ~dG~~~~~~-------~iNG~--------~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~----~~~~~DG~p~ 119 (695)
..|+.+..+ +||+. +|||+|+|++||+|+|+|+|.|. ++++|||||+++. +.+|+||+++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PGP~Ir~~~GD~v~v~v~N~l~-~~tsiHwHGl~~~~~~DG~~~~dg~~g 141 (1065)
T 2j5w_A 63 IGRLYKKALYLQYTDETFRTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLAS-RPYTFHSHGITYYKEHEGAIYPDNTTD 141 (1065)
T ss_dssp CCSEEEEEEEEEESSSSTTSBCCCCGGGTTSCCCEEEETTCEEEEEEEEESS-SCBCCEESSSBCCGGGCCCCSCCCCCG
T ss_pred cCCeEeEEEEEEecceeecCCcccccccCCcCCeEEEeCCeEEEEEEEECCC-CCeeEEeCCccCCcccCCcccCCCCCc
Confidence 345666666 58877 99999999999999999999994 8999999999997 5588999998
Q ss_pred --ccccCCCCCCeEEEEEEcCC----------CeeeEEEccccCc--CCCCceeEEEEeCCCCCCCCCCCCCCCCCceEE
Q psy978 120 --LTQCPVPPRSTFRYKFNADS----------PGTHFWHSHTGSQ--RGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIM 185 (695)
Q Consensus 120 --vtqcpI~PG~~~tY~f~~~~----------~GT~wYHsH~~~q--~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l 185 (695)
+|||||+||++|+|+|++.+ +||||||||.+.| +++||+|+|||++++.... ...+++|. |++|
T Consensus 142 ~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~-p~~~~~d~-e~~l 219 (1065)
T 2j5w_A 142 FQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDK-EKEKHIDR-EFVV 219 (1065)
T ss_dssp GGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSS-SSBTTCCE-EEEE
T ss_pred ccccccccCCCCEEEEEEEeccccCCccCCCCceEEEEEeccCchhHhhCccEEEEEEecCcccCC-CccCCCcc-ceEE
Confidence 89999999999999999976 3999999999855 5799999999998764321 12345555 7999
Q ss_pred EEe------eecccchhhhhhcccC---CCCC---CCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEe
Q psy978 186 LIT------DWSHVLGVEMFNAHHH---ADGD---NKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIIN 253 (695)
Q Consensus 186 ~l~------dw~~~~~~~~~~~~~~---~~~~---~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN 253 (695)
+|+ ||++......+..... ..+. ..++.++|||+.... .+.+.|++|++|||||||
T Consensus 220 ~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~iNG~~~~~------------~~~l~v~~Ge~vRlRliN 287 (1065)
T 2j5w_A 220 MFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMYSVNGYTFGS------------LSGLSMCAEDRVKWYLFG 287 (1065)
T ss_dssp EEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEEETTEETTC------------CCCCEEETTCEEEEEEEE
T ss_pred EeeeecCCccccccchhhhhhcCccccccccccccccCcEEEECCccCCC------------CcceEECCCCEEEEEEEc
Confidence 999 6776544333211000 0000 123468999996321 147899999999999999
Q ss_pred CCCCCccEEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEEE
Q psy978 254 AGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLR 333 (695)
Q Consensus 254 a~~~~~~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail~ 333 (695)
++.....+.|+|+||.|+ ++|..+|+|.|+|||||||+|++++ +|.|+|+++...... ....++++
T Consensus 288 ag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~dVlv~~~~-pG~y~i~~h~~~h~~-----~Gm~~~~~ 353 (1065)
T 2j5w_A 288 MGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLFDAYMVAQN-PGEWMLSCQNLNHLK-----AGLQAFFQ 353 (1065)
T ss_dssp CSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCEEEEEEECCS-CEEEEEEECSHHHHH-----TTCEEEEE
T ss_pred CCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcEEEEEEEeCC-CeeEEEEecCcchhh-----CCCEEEEE
Confidence 997533689999999999 3678999999999999999999998 599999987553221 22467788
Q ss_pred EcCCCC
Q psy978 334 YEGAPD 339 (695)
Q Consensus 334 Y~~~~~ 339 (695)
|.+...
T Consensus 354 V~~~~~ 359 (1065)
T 2j5w_A 354 VQECNK 359 (1065)
T ss_dssp EECSCC
T ss_pred EecCCC
Confidence 876443
No 21
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=4e-50 Score=421.80 Aligned_cols=141 Identities=26% Similarity=0.438 Sum_probs=122.2
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceE
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSI 101 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~si 101 (695)
..+.+|+++++.... ...+|..+.+|+|||++|||+|+|++||+|+|+|+|.+ .++++|
T Consensus 32 ~~~~~~~l~~~~~~~--------------------~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~-~~~~~i 90 (288)
T 3gdc_A 32 RTLREWDIVAVDKDF--------------------EIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAG-AHPHTI 90 (288)
T ss_dssp CEEEEEEEEEEEEEE--------------------EEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECS-SSCBCC
T ss_pred CcEEEEEEEEEEEEE--------------------EeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCC-CCcccE
Confidence 456788998887432 12348999999999999999999999999999999999 589999
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEcccc---CcCCCCceeEEEEeCCCCCCCCCCCCCC
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTG---SQRGDGSFGAFIIRKPRPREVHAPLYDF 178 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~---~q~~~Gl~G~lIV~~~~~~~p~~~~~d~ 178 (695)
||||+++ .++||+|++|||+|+||++++|+|+++++||||||||.. .|+.+||+|+|||+++... .+.
T Consensus 91 H~HG~~~---~~~DG~p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~------~~~ 161 (288)
T 3gdc_A 91 HFHGVHR---ATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR------PPA 161 (288)
T ss_dssp EESSCCC---GGGSCCTTSTTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC------CCC
T ss_pred Eeccccc---cccCCCCCccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC------CCC
Confidence 9999983 479999999999999999999999999999999999987 6899999999999986542 123
Q ss_pred CCCceEEEEeeeccc
Q psy978 179 DLPEHIMLITDWSHV 193 (695)
Q Consensus 179 d~~e~~l~l~dw~~~ 193 (695)
|. |++|+++||+.+
T Consensus 162 d~-e~~l~~~d~~~~ 175 (288)
T 3gdc_A 162 DD-EMVMVMNGYNTD 175 (288)
T ss_dssp SE-EEEEEEEEECCS
T ss_pred cc-eEEEEEeeEecC
Confidence 33 799999999865
No 22
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=4.3e-52 Score=486.23 Aligned_cols=225 Identities=17% Similarity=0.142 Sum_probs=168.8
Q ss_pred CceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCC--------ccccCCCCCCeEE
Q psy978 61 GVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPH--------LTQCPVPPRSTFR 132 (695)
Q Consensus 61 G~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~--------vtqcpI~PG~~~t 132 (695)
|..++.|+ ++|||+|+|++||+|+|+|+|.| .++++|||||+++.. +|||+|+ +|||||+||++|+
T Consensus 63 ~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l-~~~tsIHwHGl~~~~--~~DG~p~~Dg~~~~~vtq~~I~PG~s~t 136 (742)
T 2r7e_A 63 AKPRPPWM---GLLGPTIQAEVYDTVVITLKNMA-SHPVSLHAVGVSYWK--ASEGAEYDDQTSQREKEDDKVFPGGSHT 136 (742)
T ss_dssp SSCSTTTT---TTSEEEEEECSEEEEECCEECCS-SSCCCCCCSSSCCCS--SSSCCCSSCSCCSSSSSSSSCCTTCEEC
T ss_pred Cccccccc---CCcCCeEEEECCCEEEEEEEECC-CCCEeEEecCcccCc--cccCCccCCCCcccccccCcCCCCCeEE
Confidence 44454443 89999999999999999999999 599999999999864 4555554 9999999999999
Q ss_pred EEEEcC----------CCeeeEEEccccC--cCCCCceeEEEEeCCCCCCCCCCCCCCCCCceEEEEee------ecccc
Q psy978 133 YKFNAD----------SPGTHFWHSHTGS--QRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLITD------WSHVL 194 (695)
Q Consensus 133 Y~f~~~----------~~GT~wYHsH~~~--q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~d------w~~~~ 194 (695)
|+|++. ++||||||||.+. |+.+||+|+|||+++...++.. ..+ ..|++|++++ |+++.
T Consensus 137 Y~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~-~~~--~~e~~l~~~~~de~~~w~~~~ 213 (742)
T 2r7e_A 137 YVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEK-TQT--LHKFILLFAVFDEGKSWHSET 213 (742)
T ss_dssp CEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTT-TTC--CCEECCCEECCCCSSSSCCCC
T ss_pred EEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCccc-Cce--eeEEEEEeecccCCccccccc
Confidence 999984 4699999999886 7999999999999876533211 112 2377777754 55544
Q ss_pred hhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEec
Q psy978 195 GVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAIN 274 (695)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via 274 (695)
....+............+.++|||+...+ .+.+.|++|++|||||+|++.....+.|||+||.|+|++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ING~~~~~------------~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg 281 (742)
T 2r7e_A 214 KNSLMQDRDAASARAWPKMHTVNGYVNRS------------LPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRN 281 (742)
T ss_dssp CC-------CCSCCCCCCCCEETTBCTBC------------CCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETT
T ss_pred cccccccCCCccccccCceEEECCccCCC------------CcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEe
Confidence 32211100011112235678999995421 147899999999999999997643467999999999985
Q ss_pred CCCCccceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEee
Q psy978 275 SDGGDIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRG 315 (695)
Q Consensus 275 ~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~ 315 (695)
. .+|++.|.|||+++|+++++++ |.|++..+.
T Consensus 282 ~--------~~Dtv~v~Pg~~~~v~~~~~~p-G~w~~hCH~ 313 (742)
T 2r7e_A 282 H--------RQASLEISPITFLTAQTLLMDL-GQFLLFCHI 313 (742)
T ss_dssp E--------ECCSCCCCTTCCCEEEECCCSC-SEECCCCCS
T ss_pred E--------ecceEEeCCCcEEEEEEEeCCC-eeEEEEeCC
Confidence 2 4688889999999999999875 888776553
No 23
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.1e-48 Score=408.27 Aligned_cols=120 Identities=21% Similarity=0.369 Sum_probs=105.6
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceE
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSI 101 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~si 101 (695)
.++++|+|+++.. ..+......+++||++|||+|+|++||+|+|+|+|.| .++++|
T Consensus 5 g~~~~~~l~~~~~-----------------------~~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~-~~~~si 60 (276)
T 3kw8_A 5 GEVRHLKMYAEKL-----------------------ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTM-DVRASL 60 (276)
T ss_dssp CCEEEEEEEEEEC-----------------------TTSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECS-SSCBCC
T ss_pred ceEEEEEEEEEeC-----------------------CCCceecceeccCCcccCCeEEEECCCEEEEEEEECC-CCCccE
Confidence 5788999999872 1233445667899999999999999999999999999 599999
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCC-------------CeeeEEEcccc------CcCCCCceeEEE
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADS-------------PGTHFWHSHTG------SQRGDGSFGAFI 162 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~-------------~GT~wYHsH~~------~q~~~Gl~G~lI 162 (695)
||||+++.. ++||++ +|||+|+||++|+|+|++.+ +||||||||.. .|+.+||+|+||
T Consensus 61 H~HG~~~~~--~~DG~~-~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~li 137 (276)
T 3kw8_A 61 HVHGLDYEI--SSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVI 137 (276)
T ss_dssp EESSSBCCG--GGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEE
T ss_pred eecCcccCC--ccCCCc-CCcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEE
Confidence 999999976 699999 99999999999999999964 69999999984 589999999999
Q ss_pred EeCCCC
Q psy978 163 IRKPRP 168 (695)
Q Consensus 163 V~~~~~ 168 (695)
|+++..
T Consensus 138 V~~~~~ 143 (276)
T 3kw8_A 138 VRRKGD 143 (276)
T ss_dssp EECTTC
T ss_pred EecCCC
Confidence 998653
No 24
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=2.9e-48 Score=433.07 Aligned_cols=383 Identities=17% Similarity=0.123 Sum_probs=245.4
Q ss_pred eEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCee
Q psy978 63 KRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGT 142 (695)
Q Consensus 63 ~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT 142 (695)
...+++|||++ ||+|+|++||+|+|+|+|.+. ..++|||||.. ..+||+|.||++++|.|++.++||
T Consensus 43 ~g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~-~~h~~~~~g~~-----------~~~~~~i~pG~~~~~~f~~~~~Gt 109 (447)
T 2dv6_A 43 IGVGGDIDHKI-NPTLVVHEGETVQVNLVNGEG-AQHDVVVDQYA-----------ARSAIVNGKNASSTFSFVASKVGE 109 (447)
T ss_dssp EEESGGGTTCB-SCCEEEETTCEEEEEEECSSS-SCBCCEETTTT-----------EECCCBCSTTBEEEEEEECCSCEE
T ss_pred eccceeecCCc-CCeEEEcCCCEEEEEEEcCCC-CceEEEEccCC-----------cccceecCCCCeEEEEEEcCCCEE
Confidence 45577999999 999999999999999999985 45999999863 237999999999999999999999
Q ss_pred eEEEccccCcCCCCceeEEEEeCCCCCCCCCCCCCC---CCCceEEEEeeecccchhhhhh----cccCCCCCCCCCeee
Q psy978 143 HFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDF---DLPEHIMLITDWSHVLGVEMFN----AHHHADGDNKPPTIL 215 (695)
Q Consensus 143 ~wYHsH~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~---d~~e~~l~l~dw~~~~~~~~~~----~~~~~~~~~~~~~~l 215 (695)
||||||...|+.+||.|+|||+++....... .++. +..+....+ |+.......... .......+...+.++
T Consensus 110 ~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~-~~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~ 187 (447)
T 2dv6_A 110 FNYYCSIAGHRQAGMEGNIQVLPGNRAEMKS-SGADITRDPADLPGPI-GPRQAKTVRIDLETVEVKGQLDDNTTYTYWT 187 (447)
T ss_dssp EEEECCSTTHHHHTCEEEEEEESSCCCCCCC-SSBCCBCCTTCSCCCC-CSCCCCEEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEeCCCChhhCCCEEEEEEeCCccccCCC-cchhhccChhhcCCcc-ccCCCcEEEEEEEEEEEEEeccCCceeEEEE
Confidence 9999999999999999999999866432110 0000 000000000 111000000000 000000122346789
Q ss_pred eCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCccceeEEeEEEEcCCce
Q psy978 216 MNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGER 295 (695)
Q Consensus 216 ING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR 295 (695)
|||+.. .++++|++|++|||||+|++.....+.++++| + ++.||.+ +.+.|.||||
T Consensus 188 ~NG~~p--------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg--~--~~~DG~~------~~~~i~pG~~ 243 (447)
T 2dv6_A 188 FNGKVP--------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHG--A--TGPGGAA------AFTQTDPGEE 243 (447)
T ss_dssp ETTBBS--------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETT--C--CSGGGGG------GGCCBCTTCE
T ss_pred ECCccC--------------CCeEEecCCCEEEEEEEeCCCCceeEEEeecc--c--cCCCCCC------ccEEeCCCCE
Confidence 999841 15899999999999999997532244555555 3 3679873 2345999999
Q ss_pred EEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEEEEcCCCCCCCCCCccCCcccCCccccCCCCCCcCCCccccccc
Q psy978 296 WDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISE 375 (695)
Q Consensus 296 ~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 375 (695)
++++++++++ |+||++.+........ .....+.|.|.+.. . .|.++... .+.+.+
T Consensus 244 ~~~~~~~~~~-G~~~yh~h~~~~~~~~--~~Gl~g~l~v~~~~-~----~P~~d~~~-----------------~~~~~~ 298 (447)
T 2dv6_A 244 TVVTFKALIP-GIYVYHCATPSVPTHI--TNGMYGLLLVEPEG-G----LPQVDREF-----------------YVMQGE 298 (447)
T ss_dssp EEEEEECCSC-EEEEEECCSSSHHHHH--HTTCEEEEEEECTT-C----SCCCSEEE-----------------EEEEEE
T ss_pred EEEEEECCCC-eEEEEEeCCCChHHHH--hCCCEEEEEEeCCC-C----CCCCCeeE-----------------EEEecc
Confidence 9999999875 9999997642100000 11124556665321 1 11111100 000000
Q ss_pred ccccCCCCCCCccccCCceEEEEEEeeeecCCCCcccccccccccccccccccccccCCccccCCCCccccccccCCccc
Q psy978 376 LSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDEST 455 (695)
Q Consensus 376 l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~ 455 (695)
..... . . ...... .++ ..... ......+.|||+++...
T Consensus 299 ~~~~~--~----~--~~~g~~--~~~----------------~~~~~-~~~~~~~~iNG~~~~~~--------------- 336 (447)
T 2dv6_A 299 IYTVK--S----F--GTSGEQ--EMD----------------YEKLI-NEKPEYFLFNGSVGSLT--------------- 336 (447)
T ss_dssp ECBSS--C----T--TCCEEC--CBB----------------HHHHH-TTCCSEEEETTSTTCCC---------------
T ss_pred cccCC--c----c--cccccc--cCC----------------hHHhh-ccCCCEEEECCcccCCC---------------
Confidence 00000 0 0 000000 000 00000 00011346777665311
Q ss_pred cccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhccccccccc
Q psy978 456 FCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIR 535 (695)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~ 535 (695)
...++.++.|++|+|+|+|.+. ...||||||||+|+||+.+ |..
T Consensus 337 ----------------~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~~d--G~~---------------- 380 (447)
T 2dv6_A 337 ----------------RSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVYSL--GSV---------------- 380 (447)
T ss_dssp ----------------CCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEECGG--GCS----------------
T ss_pred ----------------CCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEEcC--Ccc----------------
Confidence 0135889999999999999863 4589999999999999764 211
Q ss_pred CCCCCCC-ccceeEeCCCCEEEEEEEecCceeeEEeecchhhhhcCceEEEEecc
Q psy978 536 RNLKDAP-LKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGE 589 (695)
Q Consensus 536 ~n~~~P~-~rDTv~Vp~~G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~ 589 (695)
+..|. +|||+.|++|+++.|+|++||||.|+||||+++|++.||+++|.|..
T Consensus 381 --~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~ 433 (447)
T 2dv6_A 381 --VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDG 433 (447)
T ss_dssp --SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECS
T ss_pred --cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeC
Confidence 12343 69999999999999999999999999999999999999999999964
No 25
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=2.9e-48 Score=409.25 Aligned_cols=103 Identities=24% Similarity=0.421 Sum_probs=91.0
Q ss_pred ceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcC---
Q psy978 62 VKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNAD--- 138 (695)
Q Consensus 62 ~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~--- 138 (695)
....+++.||++|||+|+|++||+|+|+|+|+| .+++||||||+++.. +|||++ +|||+|+||++|+|+|++.
T Consensus 44 ~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l-~~~~siH~HG~~~~~--~~DG~~-~~~~~i~PG~t~~Y~~~~~~~~ 119 (299)
T 3t9w_A 44 YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTT-DRVLSLHPHGVDYDV--NSDGTL-MNGSAVMPGQTRRYTWRSHVGY 119 (299)
T ss_dssp EEEESSTTCCBSSCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG--GGSCCT-TTTCCBCTTCEEEEEEBCCCCE
T ss_pred eeeeecCCCCCccCceEEEECCeEEEEEEEECC-CCCccEEeCCcccCC--ccCCCc-cccCccCCCCeEEEEEEeeccc
Confidence 345566679999999999999999999999999 589999999999864 699997 8999999999999999985
Q ss_pred ----------CCeeeEEEccccC------cCCCCceeEEEEeCCCC
Q psy978 139 ----------SPGTHFWHSHTGS------QRGDGSFGAFIIRKPRP 168 (695)
Q Consensus 139 ----------~~GT~wYHsH~~~------q~~~Gl~G~lIV~~~~~ 168 (695)
++||||||||... |+.+||+|+|||+++..
T Consensus 120 ~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~ 165 (299)
T 3t9w_A 120 RRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD 165 (299)
T ss_dssp ECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred ccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc
Confidence 5799999999754 56779999999997653
No 26
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.6e-48 Score=473.62 Aligned_cols=405 Identities=15% Similarity=0.195 Sum_probs=263.2
Q ss_pred ceEEEEEEcCCCCC--CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCC-CCCCCCCCCccccCCCCCCeEEEEEEcC
Q psy978 62 VKRAITVVNRQLPG--PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVD-SPYMDGVPHLTQCPVPPRSTFRYKFNAD 138 (695)
Q Consensus 62 ~~~~~~~iNG~~PG--P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~-~~~~DG~p~vtqcpI~PG~~~tY~f~~~ 138 (695)
..+.+.+|||++|| |+|+||+||+|+|+|.|. ++.+||||++|.+ ++++||++.+| |+|.||.+++|+|+++
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~----g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA----GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWPD 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC----CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECCC
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC----CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEecC
Confidence 57899999999999 889999999999999965 3459999999999 99999999999 9999999999999999
Q ss_pred CCeeeEEEccccCcCCCCceeEEEEeCCCCCCCCCCCCCCCCCceEEEE----eeecccchhhhhhcccCCCCCCCCCee
Q psy978 139 SPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLI----TDWSHVLGVEMFNAHHHADGDNKPPTI 214 (695)
Q Consensus 139 ~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l----~dw~~~~~~~~~~~~~~~~~~~~~~~~ 214 (695)
++||||||||.+.|+.+||+|+++|+++...+. ..+++|. |++++| +||+++..........+..+.. |.++
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~--~~~~yd~-e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~-p~~~ 766 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSE--DSTFYLG-ERTYYIAAVEVEWDYSPQREWEKELHHLQEQN-VSNA 766 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCS--CCCCCSE-EEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC-CCCT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccC--CccCCCc-ceEEEEeeeeccccCCcchhhhhhccCCCccC-ccce
Confidence 999999999999999999999999998754322 2366775 789999 8999987654322111111222 5666
Q ss_pred eeCCCCC----------CcccCCCC-----------CcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEe
Q psy978 215 LMNGKGR----------FKEFRSNA-----------TVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAI 273 (695)
Q Consensus 215 lING~~~----------~~~~~~~~-----------~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Vi 273 (695)
++|+... +..+.... +....+.++|.+++|+++++|++|.... .+.++.+| +++.
T Consensus 767 ~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~~--~~sih~HG--l~~~ 842 (1065)
T 2j5w_A 767 FLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATR--PYSIHAHG--VQTE 842 (1065)
T ss_dssp TTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSS--CBCCEESS--CBCS
T ss_pred eecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCCC--CceEeecc--cccc
Confidence 6665421 10111100 0013455799999999999999999754 44555544 5555
Q ss_pred cCCCCccceeEEeEEEEcCCceEEEEEEcCCC---------CcceEEEEeeccCCCcccCCcceEEEEEEcCCCCCCCCC
Q psy978 274 NSDGGDIKPISVGSIVSYAGERWDFILNATHH---------VGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAG 344 (695)
Q Consensus 274 a~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~---------~g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~ 344 (695)
..+. ..+.|||++...+.+.+. .|.||...+... ...+.... .+.|.+......
T Consensus 843 ~~~~----------~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~--~~q~~~GL-~G~liV~~~~~l---- 905 (1065)
T 2j5w_A 843 SSTV----------TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQ--VKDLYSGL-IGPLIVCRRPYL---- 905 (1065)
T ss_dssp CSCC----------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTH--HHHHHTTC-EEEEEEECCC------
T ss_pred CCCC----------ceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCCh--HHhhhccc-cceeEecCcccc----
Confidence 4422 245799987777766542 257887643211 00000111 112222110000
Q ss_pred CccCCcccCCccccCCCCCCcCCCcccccccccccCCCCCCCccccCCceEEEEEEeeeecCCCCccccccccccccccc
Q psy978 345 EVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGFDEVKRL 424 (695)
Q Consensus 345 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~ 424 (695)
.. + ....|..+.+.+.....+. . .
T Consensus 906 --------------------------------~~-~--------~~~~d~D~~l~~~~~d~~~-~-----~--------- 929 (1065)
T 2j5w_A 906 --------------------------------KV-F--------NPRRKLEFALLFLVFDENE-S-----W--------- 929 (1065)
T ss_dssp --------------------------------------------CCCCEEEEEEEEEEEEGGG-S-----T---------
T ss_pred --------------------------------cc-c--------CCCcceEEEEEEEeecCCc-c-----e---------
Confidence 00 0 0011222322222111000 0 0
Q ss_pred ccccccccCCccccC--CCCccccccccCCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeCCCCCCCCCcee
Q psy978 425 EKVRTPQLNHLSFRF--PTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFH 502 (695)
Q Consensus 425 ~~~~~~~iN~~s~~~--P~~PlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~~~~~HPfH 502 (695)
....|+.+|.. +.++++..........+. . +......++.+.++.|++|+|+|+|.+. ....||||
T Consensus 930 ----y~~~n~~~~~~~P~~v~~~~~~~~~~~~~~~-----i--NG~~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfH 997 (1065)
T 2j5w_A 930 ----YLDDNIKTYSDHPEKVNKDDEEFIESNKMHA-----I--NGRMFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVH 997 (1065)
T ss_dssp ----THHHHHHHHCSCGGGCCTTCHHHHHHTEEEE-----E--TTBCTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEE
T ss_pred ----eeccCcccccCCccccCcchhhhhccCceEE-----E--CCccCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEE
Confidence 00122333321 122322110000000000 0 0111112456899999999999999862 24689999
Q ss_pred ecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEeecchhhhhcCce
Q psy978 503 LHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMA 582 (695)
Q Consensus 503 LHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~ 582 (695)
||||.|+|++.+ |.+||||.|+++++++|||+|||||.|+||||+++|++.|||
T Consensus 998 lHG~~F~vv~~~--------------------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~ 1051 (1065)
T 2j5w_A 998 FHGHSFQYKHRG--------------------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGME 1051 (1065)
T ss_dssp ESSCCEEETTTT--------------------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCE
T ss_pred EcccEEEEEecC--------------------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCc
Confidence 999999998421 569999999999999999999999999999999999999999
Q ss_pred EEEEeccC
Q psy978 583 LVFKVGEH 590 (695)
Q Consensus 583 ~v~~V~~~ 590 (695)
++|.|.+.
T Consensus 1052 ~~~~V~~~ 1059 (1065)
T 2j5w_A 1052 TTYTVLQN 1059 (1065)
T ss_dssp EEEEEECC
T ss_pred EEEEEecC
Confidence 99999753
No 27
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=2.6e-46 Score=399.83 Aligned_cols=268 Identities=18% Similarity=0.211 Sum_probs=216.2
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCC-CCce
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLME-ESTS 100 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~-~~~s 100 (695)
+++.+|+|++++... ...||.++.+|+|||++|||+|+|++||+|+|+|+|.+.. .+++
T Consensus 36 ~~~~~~~l~~~~~~~--------------------~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ 95 (327)
T 1kbv_A 36 PAKVRVKMETVEKTM--------------------KMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHN 95 (327)
T ss_dssp CCEEEEEEEEEEEEE--------------------EEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBC
T ss_pred CCEEEEEEEEEEEEE--------------------EeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCcee
Confidence 678899999988542 1237999999999999999999999999999999999852 6899
Q ss_pred EeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccc---cCcCCCCceeEEEEeCCCCCCCCCCCCC
Q psy978 101 IHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHT---GSQRGDGSFGAFIIRKPRPREVHAPLYD 177 (695)
Q Consensus 101 iH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~---~~q~~~Gl~G~lIV~~~~~~~p~~~~~d 177 (695)
|||||+. .+||++..+ .|.||++++|+|+++++||||||||. +.|+.+||+|+|||++++. .| +
T Consensus 96 ih~HG~~-----~~dG~~~~~--~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~-~p-----~ 162 (327)
T 1kbv_A 96 VDFHAAT-----GQGGGAAAT--FTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG-LP-----K 162 (327)
T ss_dssp CEETTCC-----SGGGGTTTT--CBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC-CC-----C
T ss_pred eEeCccc-----cCCCCCcce--eecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC-CC-----C
Confidence 9999986 379988755 59999999999999999999999996 5799999999999998542 12 2
Q ss_pred CCCCceEEEEeeecccchhhhh---hcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeC
Q psy978 178 FDLPEHIMLITDWSHVLGVEMF---NAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINA 254 (695)
Q Consensus 178 ~d~~e~~l~l~dw~~~~~~~~~---~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa 254 (695)
+|. |.+|+++||++....... ........+..++.++|||+..+.. ..+.++|++|++|||||+|+
T Consensus 163 ~d~-e~~l~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~----------~~~~l~v~~G~~vRlRliN~ 231 (327)
T 1kbv_A 163 VDK-EFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALT----------GDNALKAKAGETVRMYVGNG 231 (327)
T ss_dssp CSE-EEEEEEEEECBSSCTTCCEEECBCHHHHHHTCCSEEEETTSTTTTS----------GGGCEEEETTEEEEEEEEEE
T ss_pred Cce-EEEEEeeeeeccCccccccccccChhHhccCCCceEEEcCcccCCC----------CceeEEeCCCCEEEEEEECC
Confidence 343 689999999987531100 0000000123578999999976521 11479999999999999999
Q ss_pred CCCCccEEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEEEE
Q psy978 255 GYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRY 334 (695)
Q Consensus 255 ~~~~~~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y 334 (695)
+... .+.|||+||.|+||+.||.+++|..+++|.|+||||+||+|+++++ |.|||+++....+. .....|+|+|
T Consensus 232 ~~~~-~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~p-G~y~l~~h~~~~~~----~~g~~a~l~~ 305 (327)
T 1kbv_A 232 GPNL-VSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIP-GNYTLVDHSIFRAF----NKGALGQLKV 305 (327)
T ss_dssp ESSC-CEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECSC-EEEEEEESSTHHHH----HSSCEEEEEE
T ss_pred CCCC-ceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCCC-eEEEEEeccccccc----cCCcEEEEEE
Confidence 9765 7899999999999999999999999999999999999999999974 99999987654321 2235899999
Q ss_pred cCCCC
Q psy978 335 EGAPD 339 (695)
Q Consensus 335 ~~~~~ 339 (695)
++.+.
T Consensus 306 ~g~~~ 310 (327)
T 1kbv_A 306 EGAEN 310 (327)
T ss_dssp ESCCC
T ss_pred CCCCC
Confidence 87653
No 28
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=3.3e-45 Score=388.73 Aligned_cols=169 Identities=21% Similarity=0.352 Sum_probs=139.3
Q ss_pred CCCc-eEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEc
Q psy978 59 ADGV-KRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNA 137 (695)
Q Consensus 59 ~dG~-~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~ 137 (695)
+||. ...++..||++|||+|+|++||+|+|+|+|+| .++++|||||+++.. .|||++ ++||+|+||++|+|+|++
T Consensus 24 ~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~--~~dG~~-~~~~~i~PG~~~~Y~~~~ 99 (313)
T 3tas_A 24 GGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTM-DVPVSLHVHGLDYEI--SSDGTK-QSRSDVEPGGTRTYTWRT 99 (313)
T ss_dssp GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG--GGSCST-TTTCCBCTTCEEEEEEBC
T ss_pred CCCceeeeeecCCccccCCeEEEECCCEEEEEEEECC-CCCccEeecCCcCCc--cCCCCc-cccCCcCCCCEEEEEEEe
Confidence 4553 45566789999999999999999999999999 589999999999865 699998 699999999999999987
Q ss_pred C-------------CCeeeEEEccccCc------CCCCceeEEEEeCCCCCCCCCCCCCCCCCceEEEEeeecccchhhh
Q psy978 138 D-------------SPGTHFWHSHTGSQ------RGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEM 198 (695)
Q Consensus 138 ~-------------~~GT~wYHsH~~~q------~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~dw~~~~~~~~ 198 (695)
. ++||||||||...+ +.+||+|+|||+++... ..|. |++|+++||+
T Consensus 100 ~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-------~~d~-e~~l~~~d~t------- 164 (313)
T 3tas_A 100 HVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-------LPDR-THTIVFNDMT------- 164 (313)
T ss_dssp CCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-------CCSE-EEEEEEETTE-------
T ss_pred ccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-------cccc-cceeeccchh-------
Confidence 4 57999999997643 57899999999987643 2344 7999998874
Q ss_pred hhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCC
Q psy978 199 FNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDG 277 (695)
Q Consensus 199 ~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG 277 (695)
+||+.... .+.+.++.|++|||||+|++.. .+.|||+||.|+|++.||
T Consensus 165 -----------------~Ng~~~~~------------~~~l~v~~Ge~vr~~liN~g~~--~hpfHlHGh~F~v~~~~~ 212 (313)
T 3tas_A 165 -----------------INNRPAHT------------GPDFEATVGDRVEFVMITHGEY--YHTFHLHGHRWADNRTGM 212 (313)
T ss_dssp -----------------ETTCCTTC------------CCCEEEETTCEEEEEEEEESSC--CEEEEETTCCEESSTTSS
T ss_pred -----------------cccCCccc------------ccccccccCCEEEEEEeccccc--ceeeeecCCeeEEEEECC
Confidence 56654331 1478999999999999999965 468999999998765543
No 29
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1.7e-44 Score=387.47 Aligned_cols=119 Identities=24% Similarity=0.415 Sum_probs=100.4
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceE-EEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCce
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKR-AITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTS 100 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~-~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~s 100 (695)
.++.+|+|++++. ++|... .++.+||++|||+|+|++||+|+|+|+|.+ .++++
T Consensus 46 g~~~~~~l~~~~~------------------------~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l-~~~~s 100 (343)
T 3cg8_A 46 GEVRHLKMYAEKL------------------------ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTM-DVRAS 100 (343)
T ss_dssp CCEEEEEEEEEEC------------------------GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECS-SSCBC
T ss_pred CeEEEEEEEEEEc------------------------cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECC-CCCee
Confidence 5678899998862 123222 223358999999999999999999999999 58999
Q ss_pred EeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCC-------------CeeeEEEccc------cCcCCCCceeEE
Q psy978 101 IHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADS-------------PGTHFWHSHT------GSQRGDGSFGAF 161 (695)
Q Consensus 101 iH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~-------------~GT~wYHsH~------~~q~~~Gl~G~l 161 (695)
|||||+++. .++||++ ++||+|+||++|+|+|++.+ +||||||||. ..|+.+||+|+|
T Consensus 101 ih~HG~~~~--~~~DG~~-~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~ 177 (343)
T 3cg8_A 101 LHVHGLDYE--ISSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPV 177 (343)
T ss_dssp CEESSSBCC--GGGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEE
T ss_pred EEecCcccC--CcCCCcc-cccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEE
Confidence 999999987 4899999 89999999999999999965 4899999996 368899999999
Q ss_pred EEeCCCC
Q psy978 162 IIRKPRP 168 (695)
Q Consensus 162 IV~~~~~ 168 (695)
||+++..
T Consensus 178 iV~~~~~ 184 (343)
T 3cg8_A 178 IVRRKGD 184 (343)
T ss_dssp EEECTTC
T ss_pred EEecCCC
Confidence 9987653
No 30
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=1.4e-42 Score=372.28 Aligned_cols=272 Identities=16% Similarity=0.096 Sum_probs=209.8
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceE
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSI 101 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~si 101 (695)
+++++|+|++++... ...||.++.+|+|||++|||+|+|++||+|+|+|+|. .+++
T Consensus 30 ~~~~~~~l~~~~~~~--------------------~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~----~~~~ 85 (333)
T 1mzy_A 30 PVINEFEMRIIEKEV--------------------QLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP----PENT 85 (333)
T ss_dssp CCEEEEEEEEEEEEE--------------------EEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC----TTCC
T ss_pred CcEEEEEEEEEEEEE--------------------EcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC----CCCc
Confidence 789999999998542 1236899999999999999999999999999999999 3789
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEcccc-----CcCCCCceeEEEEeCCCCC-CCCCCC
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTG-----SQRGDGSFGAFIIRKPRPR-EVHAPL 175 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~-----~q~~~Gl~G~lIV~~~~~~-~p~~~~ 175 (695)
||||+++.+...+||.+.++| |+||++++|+|+++++||||||||.. .|+.+||+|+|||++++.. ++...+
T Consensus 86 h~Hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p 163 (333)
T 1mzy_A 86 MPHNIDFHAATGALGGGGLTL--INPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKP 163 (333)
T ss_dssp SCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCB
T ss_pred ccccceecCCCCCCCCCceeE--eCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCC
Confidence 999999887656677777875 99999999999999999999999986 6999999999999975432 122223
Q ss_pred CCCCCCceEEEEeeecccchh-hhhh---c-------ccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecC
Q psy978 176 YDFDLPEHIMLITDWSHVLGV-EMFN---A-------HHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQG 244 (695)
Q Consensus 176 ~d~d~~e~~l~l~dw~~~~~~-~~~~---~-------~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G 244 (695)
+++|. |++|+++||++.... ..+. . ......+..++.++|||+... + ...+.++|++|
T Consensus 164 ~~~d~-e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~--~--------~~~~~l~v~~G 232 (333)
T 1mzy_A 164 VRYDT-VYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGA--L--------TGEGALKAKVG 232 (333)
T ss_dssp CCCSE-EEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHHTTTCCSEEEETTSTTT--T--------SGGGCEEEETT
T ss_pred Cccch-heeeeeeeeccCccccccccccccccccccchhHHhhccCCcEEEECCcccc--c--------CCCcceEecCC
Confidence 45565 789999999984211 0000 0 000011356789999999632 0 01247999999
Q ss_pred cEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCccce-e-EEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcc
Q psy978 245 HSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKP-I-SVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDER 322 (695)
Q Consensus 245 ~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p-~-~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~ 322 (695)
+|||||++|++... .+ +.|++|.++|++ ||.++++ . .++++.|.||||+||+++++++ |+|++.++......
T Consensus 233 er~Rl~n~~~~~~~-~~-h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~p-G~y~~~ch~~~h~~-- 306 (333)
T 1mzy_A 233 DNVLFVHSQPNRDS-RP-HLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQP-GVYAYVNHNLIEAV-- 306 (333)
T ss_dssp CEEEEEEEESSSCB-CE-EEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCSC-EEEEEEESSHHHHH--
T ss_pred CEEEEEECCCCCcc-cc-EEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCCC-EEEEEecChhhhHh--
Confidence 99999888876543 33 348999999999 9999974 3 5899999999999999999975 99999988764320
Q ss_pred cCCcceEEEEEEcCCC
Q psy978 323 FTSAYQTAVLRYEGAP 338 (695)
Q Consensus 323 ~~~~~~~ail~Y~~~~ 338 (695)
.....++++|.+..
T Consensus 307 --~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 307 --HKGATAHVLVEGEW 320 (333)
T ss_dssp --TTCCEEEEEEESCC
T ss_pred --hCCCEEEEEEcCCC
Confidence 12346889998644
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=2.7e-42 Score=370.53 Aligned_cols=274 Identities=19% Similarity=0.169 Sum_probs=207.9
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceE
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSI 101 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~si 101 (695)
+++.+|+|++++... .+.+||.++.+|+|||++|||+|+|++||+|+|+|+|.+ +++
T Consensus 30 ~~~~~~~l~~~~~~~-------------------~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~~~ 86 (336)
T 1oe1_A 30 PKVVEFTMTIEEKKM-------------------VIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA----TNA 86 (336)
T ss_dssp CCEEEEEEEEEEEEE-------------------ECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECT----TCC
T ss_pred CcEEEEEEEEEEEEE-------------------EECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCC----CCC
Confidence 678999999988542 246789999999999999999999999999999999997 346
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEcccc----CcCCCCceeEEEEeCCCCC-CCCCCCC
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTG----SQRGDGSFGAFIIRKPRPR-EVHAPLY 176 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~----~q~~~Gl~G~lIV~~~~~~-~p~~~~~ 176 (695)
||||+++.+.+++||.+.++| |+||++++|+|+++++||||||||.. .|+.+||+|+|||++++.. ++....+
T Consensus 87 ~~h~~~~h~~~~~~~~~~~~~--i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~ 164 (336)
T 1oe1_A 87 MPHNVDFHGATGALGGAKLTN--VNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL 164 (336)
T ss_dssp SCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC
T ss_pred ccccceECCCCCCCCCcceEE--eCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc
Confidence 777777776667888888886 99999999999999999999999974 6899999999999976532 2222334
Q ss_pred CCCCCceEEEEeeecccchhh-hhhcccC----------CCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCc
Q psy978 177 DFDLPEHIMLITDWSHVLGVE-MFNAHHH----------ADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGH 245 (695)
Q Consensus 177 d~d~~e~~l~l~dw~~~~~~~-~~~~~~~----------~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~ 245 (695)
++|. |++|+++||++..... .+..-.. ...+..++.++|||+....+ ..+.+.|++|+
T Consensus 165 ~~D~-e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~----------~~~~l~v~~Ge 233 (336)
T 1oe1_A 165 HYDR-AYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALT----------GANALTAKVGE 233 (336)
T ss_dssp CCSE-EEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTS----------GGGCEEEETTC
T ss_pred cCCc-eeEeeeeeeeeccccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCC----------CCcceEcCCCC
Confidence 5565 7899999999852211 0100000 01134678999999975410 11479999999
Q ss_pred EEEEEEEeCCCCCccEEEEEcCcceeEecCCCCcccee--EEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCccc
Q psy978 246 SYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPI--SVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERF 323 (695)
Q Consensus 246 ~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p~--~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~ 323 (695)
||||+..+++... ..+.|++|.|+|++ ||.+++|. .++++.|.||||+||+|+++++ |+|+|+.+......
T Consensus 234 rvRlin~~~~~~~--~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~p-G~y~~~~h~~~~~~--- 306 (336)
T 1oe1_A 234 TVLLIHSQANRDT--RPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQP-GVYAYLNHNLIEAF--- 306 (336)
T ss_dssp EEEEEEEESSSCB--CEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCSC-EEEEEEESSHHHHH---
T ss_pred EEEEEecCCCCcc--ceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCCC-ceEEEEechhhccc---
Confidence 8887555544322 22557999999998 99999875 4689999999999999999985 99999987653321
Q ss_pred CCcceEEEEEEcCCCC
Q psy978 324 TSAYQTAVLRYEGAPD 339 (695)
Q Consensus 324 ~~~~~~ail~Y~~~~~ 339 (695)
.....|+++|++...
T Consensus 307 -~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 307 -ELGAAGHIKVEGKWN 321 (336)
T ss_dssp -TTSCEEEEEEESCCC
T ss_pred -cCCCeEEEEECCCCC
Confidence 123578999986543
No 32
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=9.6e-43 Score=387.78 Aligned_cols=268 Identities=19% Similarity=0.224 Sum_probs=216.4
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCC-CCCce
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLM-EESTS 100 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~-~~~~s 100 (695)
+.+.+|+|++++... ..+||.++.+|+|||++|||+|+|++||+|+|+|+|.+. ..+++
T Consensus 26 ~~~~~~~l~~~~~~~--------------------~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~ 85 (442)
T 2zoo_A 26 SAKVVINLETREQVG--------------------RIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHN 85 (442)
T ss_dssp CCEEEEEEEEEEEEE--------------------EEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBC
T ss_pred CcEEEEEEEEEEEEE--------------------EcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCC
Confidence 678899999998542 124799999999999999999999999999999999985 36999
Q ss_pred EeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEcc---ccCcCCCCceeEEEEeCCCCCCCCCCCCC
Q psy978 101 IHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSH---TGSQRGDGSFGAFIIRKPRPREVHAPLYD 177 (695)
Q Consensus 101 iH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH---~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d 177 (695)
|||||+++ +||++..+ +|+||++++|+|+++++|||||||| +..|+.+||+|+|||++++. .| .|
T Consensus 86 iH~HG~~~-----~dG~~~~~--~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~-~~---~~- 153 (442)
T 2zoo_A 86 IDLHAVTG-----PGGGAESS--FTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG-LA---PV- 153 (442)
T ss_dssp CEETTCCS-----GGGGGGGC--CBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC-CC---CC-
T ss_pred EEecCCcC-----CCCCCccE--EECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCccEEEEEEeCCCC-CC---CC-
Confidence 99999874 79988765 6999999999999999999999997 45899999999999997542 12 23
Q ss_pred CCCCceEEEEeeecccchhhhh-hc--ccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeC
Q psy978 178 FDLPEHIMLITDWSHVLGVEMF-NA--HHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINA 254 (695)
Q Consensus 178 ~d~~e~~l~l~dw~~~~~~~~~-~~--~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa 254 (695)
|. |++|+++||++....... .. ......+..++.++|||+.... ...+.+.|++|++|||||+|+
T Consensus 154 -d~-e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~----------~~~~~l~v~~G~~vrlrliN~ 221 (442)
T 2zoo_A 154 -DR-EYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGST----------TDENSLTAKVGETVRLYIGNG 221 (442)
T ss_dssp -SE-EEEEEEEEECBSSCTTCCEEECBCHHHHHTTCCSEEEETTSTTTT----------SGGGCEEEETTCEEEEEEEEE
T ss_pred -Cc-eEEEEeeeeeccCcccccccccCChhHhccCCCCEEEECCCcCCC----------CCCCceEeCCCCEEEEEEEeC
Confidence 43 799999999987542100 00 0001113567899999996531 011479999999999999999
Q ss_pred CCCCccEEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEEEE
Q psy978 255 GYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRY 334 (695)
Q Consensus 255 ~~~~~~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y 334 (695)
+... .+.|+|+||.|+||+.||.+++|..++++.|.||||+||+|+++++ |.|+++......+. .....++|+|
T Consensus 222 ~~~~-~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~~-G~y~~~~~~~~~~~----~~g~~a~l~v 295 (442)
T 2zoo_A 222 GPNL-VSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEVP-GTFILVDHSIFRAF----NKGALAMLKV 295 (442)
T ss_dssp ESSC-CEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCSC-EEEEEEESSTHHHH----TTSCEEEEEE
T ss_pred CCCC-ceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCCC-CeEEEEeccccccc----ccCceEEEEe
Confidence 8765 6899999999999999999999999999999999999999999974 99999986543310 2346899999
Q ss_pred cCCCC
Q psy978 335 EGAPD 339 (695)
Q Consensus 335 ~~~~~ 339 (695)
.+...
T Consensus 296 ~~~~~ 300 (442)
T 2zoo_A 296 EGPDD 300 (442)
T ss_dssp ESCCC
T ss_pred cCCCC
Confidence 87653
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=2.4e-41 Score=363.82 Aligned_cols=273 Identities=18% Similarity=0.131 Sum_probs=206.3
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCcccCcceeeCCCCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceE
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSI 101 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~~~~~~~~~dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~si 101 (695)
+++.+|+|++++... .+.+||.++.+|+|||++|||+|+|++||+|+|+|+|.+ +++
T Consensus 36 ~~~~~~~l~~~~~~~-------------------~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~~~ 92 (340)
T 2bw4_A 36 PRVVEFTMTIEEKKL-------------------VIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD----TNT 92 (340)
T ss_dssp CCEEEEEEEEEEEEE-------------------ECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT----TCC
T ss_pred CcEEEEEEEEEEEEE-------------------EECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC----CCC
Confidence 678999999988542 235689999999999999999999999999999999997 679
Q ss_pred eeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEcccc----CcCCCCceeEEEEeCCCCC-CCCCCCC
Q psy978 102 HWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTG----SQRGDGSFGAFIIRKPRPR-EVHAPLY 176 (695)
Q Consensus 102 H~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~----~q~~~Gl~G~lIV~~~~~~-~p~~~~~ 176 (695)
||||+++.+....||.+.++| |.||++++|+|+++++||||||||.. .|+.+||+|+|||++++.. +....+.
T Consensus 93 ~~hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~ 170 (340)
T 2bw4_A 93 LLHNIDFHAATGALGGGALTQ--VNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL 170 (340)
T ss_dssp SCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE
T ss_pred ccCcceeCCcCCCCCCccceE--eCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc
Confidence 999999876544555566665 99999999999999999999999975 6999999999999986531 1111123
Q ss_pred CCCCCceEEEEeeecccc-hhhhhh----------cccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCc
Q psy978 177 DFDLPEHIMLITDWSHVL-GVEMFN----------AHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGH 245 (695)
Q Consensus 177 d~d~~e~~l~l~dw~~~~-~~~~~~----------~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~ 245 (695)
++|. |.+|+++||++.. ....+. .......+..++.++|||+.... ...+.++|++|+
T Consensus 171 ~~d~-e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~----------~~~~~l~v~~G~ 239 (340)
T 2bw4_A 171 TYDK-IYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGAL----------TGDHALTAAVGE 239 (340)
T ss_dssp CCSE-EEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTT----------SGGGCEEEETTC
T ss_pred Ccce-eEEEeeeeeeeccccCCcccccccccccccchhhHhhcCCCCEEEECCccCCc----------cCCCceEcCCCC
Confidence 4454 7889999999841 110000 00000013467899999996421 012589999999
Q ss_pred EEEEEEEeCCCCCccEEEEEcCcceeEecCCCCccce-e-EEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccCCCccc
Q psy978 246 SYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKP-I-SVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERF 323 (695)
Q Consensus 246 ~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p-~-~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~ 323 (695)
+|||+++|++... . .+++++|.|+|++ ||.++.+ . .+++|.|.||||+||+|+++++ |+|+++.+...+..
T Consensus 240 r~Rl~n~~~~~~~-~-~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~p-G~y~~~~h~~~~h~--- 312 (340)
T 2bw4_A 240 RVLVVHSQANRDT-R-PHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQP-GVYAYVNHNLIEAF--- 312 (340)
T ss_dssp EEEEEEEESSSCB-C-EEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCSC-EEEEEEESSHHHHH---
T ss_pred EEEEEECCCCCcc-c-eEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCCC-eeeEEEcCchHHHH---
Confidence 9988888776543 2 3458999999997 9998864 3 5899999999999999999985 99999987653211
Q ss_pred CCcceEEEEEEcCCC
Q psy978 324 TSAYQTAVLRYEGAP 338 (695)
Q Consensus 324 ~~~~~~ail~Y~~~~ 338 (695)
.....++++|.+..
T Consensus 313 -~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 313 -ELGAAGHFKVTGEW 326 (340)
T ss_dssp -TTSCEEEEEEESCC
T ss_pred -hCCCEEEEEECCCC
Confidence 12246889998644
No 34
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=4.2e-41 Score=356.27 Aligned_cols=219 Identities=16% Similarity=0.194 Sum_probs=160.9
Q ss_pred EEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCc----cCCCCCCCCCCCcc--ccCCCCCCeEEEEEEc
Q psy978 64 RAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHH----QVDSPYMDGVPHLT--QCPVPPRSTFRYKFNA 137 (695)
Q Consensus 64 ~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~----~~~~~~~DG~p~vt--qcpI~PG~~~tY~f~~ 137 (695)
++.+++| ++|||+|+|++||+|+|+|+|.| .++++|||||++ +.+.+++||+++++ ||+|+||++|+|+|++
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECS-SSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECC-CCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 4566799 69999999999999999999998 599999999999 44555556655555 7999999999999999
Q ss_pred CCC----------eeeEEEccccC--cCCCCceeEEEEeCCCCCCCCCCCCCCCCCceEEEEeeecccchhhhhhcccCC
Q psy978 138 DSP----------GTHFWHSHTGS--QRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHA 205 (695)
Q Consensus 138 ~~~----------GT~wYHsH~~~--q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~dw~~~~~~~~~~~~~~~ 205 (695)
.+. ||||||||... |+.+||+|+|||+++...+....+++.|. |++|+++||.....
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~-e~~l~~~d~d~~~~---------- 195 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEK-QHVLMFAVFDESKS---------- 195 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCC-CCCCBCCEEETTSS----------
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccc-eEEEEEEecccccc----------
Confidence 653 89999999876 88999999999998764432223344554 78999999842211
Q ss_pred CCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCccceeEE
Q psy978 206 DGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISV 285 (695)
Q Consensus 206 ~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p~~~ 285 (695)
.....++.++|||+.... .+.++|++|++|||||+|++.....+.|||+||.|.+ || ..+
T Consensus 196 ~~~~~~~~~~ING~~~~~------------~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~ 255 (306)
T 1sdd_A 196 WNQTSSLMYTVNGYVNGT------------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKI 255 (306)
T ss_dssp SSCCCCEEECSSSCCSSC------------CCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EEC
T ss_pred cccCCCcceeeCCEecCC------------CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEc
Confidence 012345789999996521 1468999999999999999976324569999999986 77 358
Q ss_pred eEEEEcCCceEEEEEEcCCCCcceEEEEeec
Q psy978 286 GSIVSYAGERWDFILNATHHVGNYWIKMRGL 316 (695)
Q Consensus 286 d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~ 316 (695)
|++.|.||||+||+++++++ |.|++..+..
T Consensus 256 dtv~l~pger~~v~~~~~~p-G~~~~hch~~ 285 (306)
T 1sdd_A 256 SAITLVSATSTTANMTVSPE-GRWTIASLIP 285 (306)
T ss_dssp SCCCEETTCCBC---------CCCCCBCCST
T ss_pred ceEEECCCcEEEEEEEcCCC-eEEEEEeCCh
Confidence 99999999999999999875 8898876543
No 35
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=3.7e-39 Score=374.79 Aligned_cols=224 Identities=17% Similarity=0.202 Sum_probs=166.1
Q ss_pred cCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCcc--------ccCCCCCCeEEEEEEcCC--
Q psy978 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLT--------QCPVPPRSTFRYKFNADS-- 139 (695)
Q Consensus 70 NG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vt--------qcpI~PG~~~tY~f~~~~-- 139 (695)
|+++|||+|+|++||+|+|+|+|.| .++++|||||+++.. +|||+|++| ||||+||++|+|+|++.+
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l-~~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~ 139 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLA-SRPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRS 139 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCS-SSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTT
T ss_pred ccCCcCceEEEeCCCEEEEEEEECC-CCceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCccc
Confidence 6789999999999999999999999 589999999999964 799999987 999999999999999976
Q ss_pred ----Ce----eeEEEcccc--CcCCCCceeEEEEeCCCCCCCCCCCCCCCCCceEEEEe------eecccchhhhhhccc
Q psy978 140 ----PG----THFWHSHTG--SQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLIT------DWSHVLGVEMFNAHH 203 (695)
Q Consensus 140 ----~G----T~wYHsH~~--~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~------dw~~~~~~~~~~~~~ 203 (695)
+| |||||||.. .|+.+||+|+|||+++........ .+.+..|++|+|+ ||+++..........
T Consensus 140 gp~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~-~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~ 218 (647)
T 1sdd_B 140 GPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETN-MPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA 218 (647)
T ss_dssp SCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSC-CCSSCCEEEEEEEEEEGGGSSCCC----------
T ss_pred CCCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccC-CCCcceeEEEEEEeecCccccccccCcccccccC
Confidence 58 999999985 799999999999998764321111 1222238999999 677764322101001
Q ss_pred CCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCcccee
Q psy978 204 HADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPI 283 (695)
Q Consensus 204 ~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p~ 283 (695)
.......++.++|||+... .+.+.|++|++|||||+|++.....+.|||+||.|+|++.|| .
T Consensus 219 ~~~~~~~~~~~~iNG~~~~-------------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~ 280 (647)
T 1sdd_B 219 SSEVKNSHEFHAINGMIYN-------------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----H 280 (647)
T ss_dssp -----CCCEEEEETTBSSC-------------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----E
T ss_pred CcchhhcCceeccCCEecC-------------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----c
Confidence 1111345688999999641 147899999999999999997644688999999999999986 4
Q ss_pred EEeEEEEcCCceEEEEEEcCCCCcceEEEEeec
Q psy978 284 SVGSIVSYAGERWDFILNATHHVGNYWIKMRGL 316 (695)
Q Consensus 284 ~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~ 316 (695)
.+|++.|.||||+||+|+++++ |.|.+..+..
T Consensus 281 ~~d~v~l~pg~r~~v~~~~~~p-G~w~~hch~~ 312 (647)
T 1sdd_B 281 QLGVWPLLPGSFKTLEMKASKP-GWWLLDTEVG 312 (647)
T ss_dssp EESSEEECTTEEEEEEEECCSS-EEEEEECCCH
T ss_pred ccceEEECCCeEEEEEEEeccc-eEeecccCcc
Confidence 7899999999999999999986 8888876643
No 36
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=1.2e-38 Score=373.29 Aligned_cols=267 Identities=13% Similarity=0.095 Sum_probs=196.3
Q ss_pred CceEEEEEEEEEEEeecccccCCCCCCccc-CcceeeCCCCc--eEEEE------EEcC-----------CCCCCeEEEE
Q psy978 22 TRTCTYDFHIEWYYTMSKACYDCPFNVTDC-GRLHCIPADGV--KRAIT------VVNR-----------QLPGPAVDVC 81 (695)
Q Consensus 22 ~~~~~~~~~v~~~~~~~~~~~~~~~n~t~~-~~~~~~~~dG~--~~~~~------~iNG-----------~~PGP~I~v~ 81 (695)
..+++|.+.+++. +.++-.+.+++ ....|...+|. ++.++ ++++ ++|||+|+|+
T Consensus 131 g~~r~y~i~a~e~------~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~ 204 (770)
T 2r7e_B 131 KKTRHYFIAAVER------LWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAE 204 (770)
T ss_dssp CCCEEEEEEEEEC------CCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCC
T ss_pred CCEEEEEEEEEEE------EEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEE
Confidence 4678888888773 24444444432 23344555662 33333 2333 6899999999
Q ss_pred eCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcC----------CCeeeEEEccccC
Q psy978 82 VGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNAD----------SPGTHFWHSHTGS 151 (695)
Q Consensus 82 ~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~----------~~GT~wYHsH~~~ 151 (695)
+||+|+|+|+|.| .++++|||||+++..... ||+|+ +||||+||++|+|+|++. ++||||||||...
T Consensus 205 ~GD~v~v~~~N~l-~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~ 281 (770)
T 2r7e_B 205 VEDNIMVTFRNQA-SRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDL 281 (770)
T ss_dssp SSSCEEEEEECCS-SSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSS
T ss_pred cCCEEEEEEEECC-CCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCc
Confidence 9999999999999 589999999999988743 69998 999999999999999997 8999999999986
Q ss_pred --cCCCCceeEEEEeCCCCCCCCCCCCCCCCCceEEEEee------ecccchhhhhhcccCC---CC---CCCCCeeeeC
Q psy978 152 --QRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLITD------WSHVLGVEMFNAHHHA---DG---DNKPPTILMN 217 (695)
Q Consensus 152 --q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~d------w~~~~~~~~~~~~~~~---~~---~~~~~~~lIN 217 (695)
|+.+||+|+|||+++....+.......|. |++|++++ |+++.....+...... .. ....+.++||
T Consensus 282 ~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~-E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~~~~~~~~~IN 360 (770)
T 2r7e_B 282 EKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQ-EFALFFTIFDETKSWYFTENMERNCRAPCNIQMEDPTFKENYRFHAIN 360 (770)
T ss_dssp SHHHHTSCCEEEEEECSTTSCSSSCCCCSSE-EEECCCCEECCSSSSCTTGGGSSCSCCSSCCCSSSSSSTTTSCEECTT
T ss_pred HHHHhCCceeeEEECCCcccccccCCCccce-EEEEEEeecCccccchhccchhhcccCccccccCCccccccCCccccC
Confidence 78999999999998765432211112233 78777643 6665433222110000 00 1123468999
Q ss_pred CCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCccceeEEeEEEEcCCceEE
Q psy978 218 GKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWD 297 (695)
Q Consensus 218 G~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~pGeR~d 297 (695)
|+.... .+.+.|++|++|||||+|++.....+.|||+||.|+|++.||. .+|+|.|.||||++
T Consensus 361 G~~~~~------------~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~ 423 (770)
T 2r7e_B 361 GYIMDT------------LPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFET 423 (770)
T ss_dssp SCTTTT------------CCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCE
T ss_pred CccCCC------------CCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEE
Confidence 995421 1468899999999999999875435789999999999999974 89999999999999
Q ss_pred EEEEcCCCCcceEEEEeec
Q psy978 298 FILNATHHVGNYWIKMRGL 316 (695)
Q Consensus 298 Vlv~a~~~~g~Y~Ir~~~~ 316 (695)
|+|+++++ |.|.|..+..
T Consensus 424 v~~~ad~p-G~w~~hcH~~ 441 (770)
T 2r7e_B 424 VEMLPSKA-GIWRVECLIG 441 (770)
T ss_dssp EEECCSSC-BCCCBCCCSH
T ss_pred EEEEeCCC-CceEEEeccc
Confidence 99999975 8887776543
No 37
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=8.4e-37 Score=340.46 Aligned_cols=248 Identities=19% Similarity=0.215 Sum_probs=197.4
Q ss_pred CCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCC-CCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcC
Q psy978 60 DGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLM-EESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNAD 138 (695)
Q Consensus 60 dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~-~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~ 138 (695)
+|..+.+++|||++|||+|+|++||+++|+|+|.+. ...++|||||+. .+||+|..+| |.||++++|.|+++
T Consensus 179 ~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~~~--i~pG~~~~~~~~~~ 251 (447)
T 2dv6_A 179 DNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAFTQ--TDPGEETVVTFKAL 251 (447)
T ss_dssp TTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGGCC--BCTTCEEEEEEECC
T ss_pred CCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCccEE--eCCCCEEEEEEECC
Confidence 588899999999999999999999999999999984 367999999985 3799998775 99999999999999
Q ss_pred CCeeeEEEcccc---CcCCCCceeEEEEeCCCCCCCCCCCCCCCCCceEEEEeeecccchhhhhh---cccCCCCCCCCC
Q psy978 139 SPGTHFWHSHTG---SQRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVLGVEMFN---AHHHADGDNKPP 212 (695)
Q Consensus 139 ~~GT~wYHsH~~---~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~dw~~~~~~~~~~---~~~~~~~~~~~~ 212 (695)
++||||||||.. .|+.+||+|+|||+++.. .| ++|. |.+++++||++........ .......+..++
T Consensus 252 ~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~-~P-----~~d~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 324 (447)
T 2dv6_A 252 IPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG-LP-----QVDR-EFYVMQGEIYTVKSFGTSGEQEMDYEKLINEKPE 324 (447)
T ss_dssp SCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC-SC-----CCSE-EEEEEEEEECBSSCTTCCEECCBBHHHHHTTCCS
T ss_pred CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC-CC-----CCCe-eEEEEecccccCCcccccccccCChHHhhccCCC
Confidence 999999999974 678899999999987542 22 2333 6889999999753211000 000000113468
Q ss_pred eeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCcccee--EEeEEEE
Q psy978 213 TILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPI--SVGSIVS 290 (695)
Q Consensus 213 ~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p~--~~d~l~l 290 (695)
.++|||+..... +...+.|++|++|||||+|++... .+.|||+||.|+||+.||.+++|. .+|++.|
T Consensus 325 ~~~iNG~~~~~~----------~~~~~~v~~g~~vrlrliN~~~~~-~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l 393 (447)
T 2dv6_A 325 YFLFNGSVGSLT----------RSHPLYASVGETVRIFFGVGGPNF-TSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSV 393 (447)
T ss_dssp EEEETTSTTCCC----------CCCCEEECTTCEEEEEEEEEESSC-CEEEEEETCCEEEECGGGCSSSCCEEEESEEEE
T ss_pred EEEECCcccCCC----------CCcceEECCCCEEEEEEEeCCCCc-eEeEEEcCcEEEEEEcCCcccCCCcccccEEEE
Confidence 899999976411 113789999999999999998654 689999999999999999998755 5899999
Q ss_pred cCCceEEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEEEEcCCC
Q psy978 291 YAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAP 338 (695)
Q Consensus 291 ~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y~~~~ 338 (695)
.||||++|+++++++ |.|+|+++..... .....++++|.+.+
T Consensus 394 ~pg~r~~i~~~~~~p-G~~~~hch~~~h~-----~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 394 PPGGATIVDFKIDRA-GRYILVDHALSRL-----EHGLVGFLNVDGPK 435 (447)
T ss_dssp CTTEEEEEEEECCSC-EEEEEEESSGGGG-----GGTCCEEEEECSCS
T ss_pred CCCcEEEEEEECCCC-EEEEEEecCcCcc-----ccCCEEEEEEeCCC
Confidence 999999999999975 9999998765432 22347899998654
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.8e-36 Score=354.29 Aligned_cols=224 Identities=16% Similarity=0.214 Sum_probs=173.6
Q ss_pred cCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCC-----CCCCccccCCCCCCeEEEEEEcCC-C---
Q psy978 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMD-----GVPHLTQCPVPPRSTFRYKFNADS-P--- 140 (695)
Q Consensus 70 NG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~D-----G~p~vtqcpI~PG~~~tY~f~~~~-~--- 140 (695)
...+|||+|++++||+|+|+|+|.+ +++++|||||+++. ++|+| |+++++||+|+||++|+|+|++.+ +
T Consensus 446 ~~g~pGP~Ir~~~GD~v~v~~~N~l-~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg 523 (742)
T 2r7e_A 446 ESGILGPLLYGEVGDTLLIIFKNQA-SRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPT 523 (742)
T ss_dssp SSCSCCCCCCCBTTCEEECCEECCS-SSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCC
T ss_pred ccCCCCCeEEEECCCEEEEEEEeCC-CCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCc
Confidence 3468999999999999999999999 58999999999985 56776 567889999999999999999964 3
Q ss_pred ------eeeEEEccccC--cCCCCceeEEEEeCCCCCCCCCCCCCCCCCceEEEEe------eecccchhhhhhcccCCC
Q psy978 141 ------GTHFWHSHTGS--QRGDGSFGAFIIRKPRPREVHAPLYDFDLPEHIMLIT------DWSHVLGVEMFNAHHHAD 206 (695)
Q Consensus 141 ------GT~wYHsH~~~--q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~------dw~~~~~~~~~~~~~~~~ 206 (695)
||||||||... |+.+||+|+|||+++...++...+++.|. |++|+++ +|++......+.......
T Consensus 524 ~~d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~-E~~l~~~~fde~~~wy~~~~~~~~~~~p~~v 602 (742)
T 2r7e_A 524 KSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDK-RNVILFSVFDENRSWYLTENIQRFLPNPAGV 602 (742)
T ss_dssp SSSCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSC-CCEEEECBCCGGGSSCSHHHHHHHSSSSSCS
T ss_pred ccCCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCc-eEEEEeeccccccccccccchhhcccCchhc
Confidence 49999999874 67899999999998765544444556666 7899985 466544333322110000
Q ss_pred CCC------CCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCcc
Q psy978 207 GDN------KPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDI 280 (695)
Q Consensus 207 ~~~------~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v 280 (695)
... ....++|||+...+ . .+.|++|++|||||+|++.....+.|||+||.|+|+
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~~~------------~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~------- 662 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVFDS------------L-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK------- 662 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCSSC------------C-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB-------
T ss_pred ccccccccccCceeeecCcCCCC------------C-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe-------
Confidence 000 11247899996421 1 378999999999999988654356799999999987
Q ss_pred ceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeeccC
Q psy978 281 KPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMD 318 (695)
Q Consensus 281 ~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~ 318 (695)
+..+|+|.|.||||++|+++++++ |.|.+..+.+..
T Consensus 663 -~~~~Dtv~l~Pg~~~~v~~~ad~p-G~w~~hcH~~~H 698 (742)
T 2r7e_A 663 -MVYEDTLTLFPFSGETVFMSMENP-GLWILGCHNSDF 698 (742)
T ss_dssp -SSSBCSSCCCCCSSEECCEECCCC-CCSCCEECCCST
T ss_pred -ccceeEEEECCCcEEEEEEEcCCC-eEEEEEeCCchH
Confidence 578899999999999999999976 899888875543
No 39
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.94 E-value=1.2e-25 Score=241.19 Aligned_cols=245 Identities=21% Similarity=0.269 Sum_probs=158.1
Q ss_pred CCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecC---CCCccceeEEeE
Q psy978 211 PPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINS---DGGDIKPISVGS 287 (695)
Q Consensus 211 ~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~---DG~~v~p~~~d~ 287 (695)
...+++||+.. .++|+|++|+++|+|++|..... ++|+.|.+.+.+. ||.+. ++.
T Consensus 23 ~~~~~~NG~~p--------------GP~I~v~~Gd~v~v~v~N~l~~~----~siH~HG~~~~~~~~~DGvp~----vtq 80 (339)
T 2zwn_A 23 YKVFGFNGQVP--------------GPLIHVQEGDDVIVNVTNNTSLP----HTIHWHGVHQKGTWRSDGVPG----VTQ 80 (339)
T ss_dssp EEEEEETTBSS--------------CCEEEEETTCEEEEEEEEESSSC----BCCEEETCCCTTCGGGSCCBT----TTB
T ss_pred EEEEEECCccC--------------CCeEEEECCCEEEEEEEECCCCC----ccEEeCCCCcCCCcccCCCCc----ccc
Confidence 35789999832 25999999999999999998543 4566777888875 99863 234
Q ss_pred EEEcCCceEEEEEEcCCCCcceEEEEeeccCCCccc-CCcceEEEEEEcCCCCCCCCCCccCCcccCCccccCCCCCCcC
Q psy978 288 IVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERF-TSAYQTAVLRYEGAPDESPAGEVDYDATRTSGTVLNPLNTPSR 366 (695)
Q Consensus 288 l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~-~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~ 366 (695)
..|.||||+++.+++++ +|+||.+.+..... ... .... .+++.....+. .
T Consensus 81 ~~I~PG~~~~y~f~~~~-~Gt~wyH~H~~~~~-q~~~~Gl~-G~liV~p~~~~----~---------------------- 131 (339)
T 2zwn_A 81 QPIEAGDSYTYKFKADR-IGTLWYHCHVNVNE-HVGVRGMW-GPLIVDPKQPL----P---------------------- 131 (339)
T ss_dssp CCBCTTCEEEEEEECCS-CEEEEEECCSSHHH-HTTTSCCE-EEEEEECSSCC----T----------------------
T ss_pred CccCCCCeEEEEEECCC-CEEEEEEecCCchh-hhhcCCce-EeEEecCCCcc----c----------------------
Confidence 56899999999999985 69999986542200 000 1111 22222110000 0
Q ss_pred CCcccccccccccCCCCCCCccccCCceEEEEEEeeeecCCCCcccccccccccccccccccccccCCccccCCCCcccc
Q psy978 367 QAKSTLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLS 446 (695)
Q Consensus 367 ~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~ 446 (695)
++...|..+.+.++-+....... .+.... .....-.+.|||+.+.
T Consensus 132 ---------------------~~~~~d~e~~l~l~d~~~~~~~~-----~~~~g~-~~~~~~~~~ING~~~~-------- 176 (339)
T 2zwn_A 132 ---------------------IEKRVTKDVIMMMSTWESAVADK-----YGEGGT-PMNVADYFSVNAKSFP-------- 176 (339)
T ss_dssp ---------------------TGGGCSEEEEEEEEEECGGGTTC-----TTCCCS-TTSCCCEEEETTBCTT--------
T ss_pred ---------------------ccccCCceEEEEeeheecccccc-----cCCCCC-CccccceEEEccccCC--------
Confidence 00001222222221110000000 000000 0000012346665431
Q ss_pred ccccCCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchh
Q psy978 447 QRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVI 526 (695)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~ 526 (695)
...++.++.|++|+|+|+|.+ ...||||||||.|+||+.+ |.+
T Consensus 177 -------------------------~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~D--G~~------- 219 (339)
T 2zwn_A 177 -------------------------LTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKD--GLP------- 219 (339)
T ss_dssp -------------------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEET--TEE-------
T ss_pred -------------------------CcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeC--Cee-------
Confidence 123478999999999999987 4589999999999999874 211
Q ss_pred cccccccccCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEeecchhh------hhcCceEEEEecc
Q psy978 527 DMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFH------VETGMALVFKVGE 589 (695)
Q Consensus 527 ~~~~~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~AdNPG~Wl~HCHi~~H------~~~GM~~v~~V~~ 589 (695)
+.+|.++||+.|++|+.+.|+|++||||.|+||||+++| ...||+++|.+..
T Consensus 220 -----------~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g 277 (339)
T 2zwn_A 220 -----------LDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDG 277 (339)
T ss_dssp -----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETT
T ss_pred -----------cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECC
Confidence 123668999999999999999999999999999999999 7889999998864
No 40
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.92 E-value=6.5e-25 Score=233.07 Aligned_cols=247 Identities=19% Similarity=0.260 Sum_probs=159.0
Q ss_pred CeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCccee-EecCCCCccceeEEeEEEE
Q psy978 212 PTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLT-AINSDGGDIKPISVGSIVS 290 (695)
Q Consensus 212 ~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~-Via~DG~~v~p~~~d~l~l 290 (695)
..+++||+.. .++|++++|+++++|+.|.... +..+|.+|.... ..+.||.+.. ....|
T Consensus 23 ~~~~~ng~~p--------------GP~i~~~~Gd~v~v~~~N~l~~--~~siH~HG~~~~~~~~~DG~p~~----t~~~i 82 (318)
T 3g5w_A 23 HTFAFNGQVP--------------APLIHVMEGDDVTVNVTNMTTL--PHTIHWHGMLQRGTWQSDGVPHA----TQHAI 82 (318)
T ss_dssp EEEEETTBSS--------------CCEEEEETTCEEEEEEEECSSS--CBCCEEETCCCTTCGGGSCCBTT----TBCCB
T ss_pred EEEEECCccC--------------CceEEEeCCCEEEEEEEeCCCC--ceeEEecCcCCCCCcccCCCccc----ccccC
Confidence 5789999832 2699999999999999999865 467888886544 3478997642 23568
Q ss_pred cCCceEEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEEEEcCCCCCCCCCCccCCcccCCccccCCCCCCcCCCcc
Q psy978 291 YAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATRTSGTVLNPLNTPSRQAKS 370 (695)
Q Consensus 291 ~pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 370 (695)
.|||+++..+++++ +|+||...+............ ..++|.....+. .
T Consensus 83 ~PG~~~~y~f~~~~-~Gt~wYH~H~~~~~~~~~~Gl-~G~lIV~~~~~~-------~----------------------- 130 (318)
T 3g5w_A 83 EPGDTFTYKFKAEP-AGTMWYHCHVNVNEHVTMRGM-WGPLIVEPKNPL-------P----------------------- 130 (318)
T ss_dssp CTTCEEEEEEECCS-CEEEEEECCSSHHHHHHHSCC-EEEEEEECSSCC-------H-----------------------
T ss_pred CCCCEEEEEEEcCC-CEEEEEEccCChhhhhccCCC-EEEEEEcCCCcc-------c-----------------------
Confidence 99999999999975 599998765421100000011 123332211000 0
Q ss_pred cccccccccCCCCCCCccccCCceEEEEEEeeeecCCCCcccccccccccccccccccccccCCccccCCCCcccccccc
Q psy978 371 TLISELSTVHSASSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQ 450 (695)
Q Consensus 371 ~~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~ 450 (695)
++...|+.+.+.++-+..... ..++.... .....-.+.|||+.|.
T Consensus 131 -----------------~~~~~d~e~~l~l~dw~~~~~-----~~~~~~~~-~~~~~d~~~ING~~~~------------ 175 (318)
T 3g5w_A 131 -----------------IEKTVTKDYILMLSDWVSSWA-----NKPGEGGI-PGDVFDYYTINAKSFP------------ 175 (318)
T ss_dssp -----------------HHHTCCEEEEEEEEEECGGGT-----TCTTCCCC-TTCCCCEEEETTBCBT------------
T ss_pred -----------------ccccccceeEEEEEeeccccc-----cccccCCC-CCCcCcEEEEcCcCCC------------
Confidence 000112222222211110000 00000000 0000012457776541
Q ss_pred CCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccc
Q psy978 451 IDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDA 530 (695)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~ 530 (695)
.+..+.++.|++|+|+|+|.+ ...||||||||.|+||+.+ |.+
T Consensus 176 ---------------------~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~d--G~~----------- 218 (318)
T 3g5w_A 176 ---------------------ETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKD--GFP----------- 218 (318)
T ss_dssp ---------------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEET--TEE-----------
T ss_pred ---------------------CCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecC--Ccc-----------
Confidence 122478999999999999987 4579999999999999875 211
Q ss_pred cccccCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEeecchhhhh------cCceEEEEecc
Q psy978 531 KGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVE------TGMALVFKVGE 589 (695)
Q Consensus 531 ~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~AdNPG~Wl~HCHi~~H~~------~GM~~v~~V~~ 589 (695)
+..|.+|||+.|++|+.+.|+|+|+|||.|+||||+++|++ .|||.+|++..
T Consensus 219 -------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g 276 (318)
T 3g5w_A 219 -------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEE 276 (318)
T ss_dssp -------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETT
T ss_pred -------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECC
Confidence 12466899999999999999999999999999999999998 57899999864
No 41
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.83 E-value=3.9e-20 Score=214.83 Aligned_cols=247 Identities=13% Similarity=0.153 Sum_probs=141.3
Q ss_pred CCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCccce----eEEeEEEEcCCceEEEEEEcCCC----
Q psy978 234 TPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKP----ISVGSIVSYAGERWDFILNATHH---- 305 (695)
Q Consensus 234 ~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p----~~~d~l~l~pGeR~dVlv~a~~~---- 305 (695)
.|.|+|++++|+++++||.|.... +..+|.||.... .+.||.+... ..+....|.|||+++..++++++
T Consensus 66 ~pGP~I~~~~Gd~v~v~~~N~l~~--~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~ 142 (647)
T 1sdd_B 66 ILGPVIRAEVDDVIQVRFKNLASR--PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPE 142 (647)
T ss_dssp TSCCCEEEETTCEEEEEECCCSSS--CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCC
T ss_pred CcCceEEEeCCCEEEEEEEECCCC--ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCC
Confidence 345799999999999999999864 456777775543 5789986432 22345679999999999999874
Q ss_pred -Cc----ceEEEEeeccCCCcccCCcceEEEEEEcCCCCCCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccC
Q psy978 306 -VG----NYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVH 380 (695)
Q Consensus 306 -~g----~Y~Ir~~~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 380 (695)
+| +||.+.+..... .. ......++|.............+. .
T Consensus 143 ~~G~~c~T~wYHsH~~~~~-q~-~~GL~G~lIV~~~~~~~~~~~~~~-~------------------------------- 188 (647)
T 1sdd_B 143 NPGSACRAWAYYSAVNPEK-DI-HSGLIGPLLICRKGTLDKETNMPV-D------------------------------- 188 (647)
T ss_dssp SSSCSEEEEEEECCSSHHH-HH-TTTCEEEEEEECTTSSCTTSCCCS-S-------------------------------
T ss_pred CCCCCceEEEEccCCCCcc-cc-cccCccCEEEeeCCCcccccCCCC-c-------------------------------
Confidence 47 999987642110 00 112223444332111000000000 0
Q ss_pred CCCCCCccccCCceEEEEEEeeeecCCCCccccc--ccccccccccccccccccCCccccCCCCccccccccCCcccccc
Q psy978 381 SASSDVRLQDRANLTFYISYDFYEIDNPHFHLST--LYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCS 458 (695)
Q Consensus 381 ~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~ 458 (695)
..+..+.+. .+.......+.... .+.............+.|||+.+.
T Consensus 189 ----------~~e~~l~l~-~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~-------------------- 237 (647)
T 1sdd_B 189 ----------MREFVLLFM-VFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYN-------------------- 237 (647)
T ss_dssp ----------CCEEEEEEE-EEEGGGSSCCC---------------CCCEEEEETTBSSC--------------------
T ss_pred ----------ceeEEEEEE-eecCccccccccCcccccccCCcchhhcCceeccCCEecC--------------------
Confidence 001111111 01000000000000 000000000000012345665431
Q ss_pred CCccCCCCCCCcccceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCC
Q psy978 459 NLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNL 538 (695)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~ 538 (695)
.+.+.++.|++|.|+|+|.+.. ...||||||||.|+|++.+
T Consensus 238 --------------~p~l~v~~G~~vrlrliN~~~~-~~~h~~hlhG~~f~vi~~d------------------------ 278 (647)
T 1sdd_B 238 --------------LPGLRMYEQEWVRLHLLNLGGS-RDIHVVHFHGQTLLENGTQ------------------------ 278 (647)
T ss_dssp --------------CCCCEEETTCEEEEEEEECCCT-TCCEEEEETTCCEEECSSS------------------------
T ss_pred --------------CCCeEEcCCCEEEEEEEeCCCC-CcceeEEEcCcEEEEecCC------------------------
Confidence 1247789999999999998731 2479999999999998421
Q ss_pred CCCCccceeEeCCCCEEEEEEEecCceeeEEeecchhhhhcCceEEEEecc
Q psy978 539 KDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGE 589 (695)
Q Consensus 539 ~~P~~rDTv~Vp~~G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~ 589 (695)
|.++||+.|+||+.+.|+|+|++||.|+||||+++|++.||+++|.|.+
T Consensus 279 --~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 279 --QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp --CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred --CcccceEEECCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 3389999999999999999999999999999999999999999999953
No 42
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.82 E-value=2e-21 Score=205.35 Aligned_cols=227 Identities=12% Similarity=0.132 Sum_probs=129.2
Q ss_pred eeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCccc----eeEEeEEEEcCCceEEEEEEcCCCC------
Q psy978 237 EVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIK----PISVGSIVSYAGERWDFILNATHHV------ 306 (695)
Q Consensus 237 ~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~----p~~~d~l~l~pGeR~dVlv~a~~~~------ 306 (695)
++|++++|+++++|++|.... ++.+|.+|..+. .+.||.+.. +...+...|.||||++..++++++.
T Consensus 60 P~I~v~~Gd~v~v~~~N~l~~--~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d 136 (306)
T 1sdd_A 60 PTLYAEVGDIMKVHFKNKAHK--PLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDD 136 (306)
T ss_dssp CCEEEETTCEEEEEEEECSSS--CBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSS
T ss_pred CEEEEeCCCEEEEEEEECCCC--cccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCC
Confidence 589999999999999998753 556777776632 368998752 2233356789999999999998754
Q ss_pred ---cceEEEEeeccCCCcccCCcceEEEEEEcCCC-CCCCCCCccCCcccCCccccCCCCCCcCCCcccccccccccCCC
Q psy978 307 ---GNYWIKMRGLMDCDERFTSAYQTAVLRYEGAP-DESPAGEVDYDATRTSGTVLNPLNTPSRQAKSTLISELSTVHSA 382 (695)
Q Consensus 307 ---g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y~~~~-~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 382 (695)
|+||.+.+..... .. ......++|.+.... ...+. ...++. .-...+.+
T Consensus 137 ~~~GT~wYHsH~~~~~-q~-~~GL~G~liV~~~~~~~~~~~-~~~~d~-----------------e~~l~~~d------- 189 (306)
T 1sdd_A 137 PPCLTHIYYSYVNLVE-DF-NSGLIGPLLICKKGTLTEDGT-QKMFEK-----------------QHVLMFAV------- 189 (306)
T ss_dssp CSEEEEEEECCSSSHH-HH-HTTCCEEEEEECTTCBCTTSS-BSSSCC-----------------CCCCBCCE-------
T ss_pred CCceEEEEeccCCchh-hh-ccCceEEEEEccCCCCCccCC-cCcccc-----------------eEEEEEEe-------
Confidence 6999987642210 00 012223455443211 00000 000000 00000000
Q ss_pred CCCCccccCCceEEEEEEeeeecCCCCcccccccccccccccccccccccCCccccCCCCccccccccCCccccccCCcc
Q psy978 383 SSDVRLQDRANLTFYISYDFYEIDNPHFHLSTLYGFDEVKRLEKVRTPQLNHLSFRFPTFPLLSQRDQIDESTFCSNLTT 462 (695)
Q Consensus 383 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~iN~~s~~~P~~PlL~~~~~~~~~~~~~~~~~ 462 (695)
+.. ..++ ++ ..+ ..+.|||+.+. .
T Consensus 190 -------------------~d~--~~~~-----~~-----~~~--~~~~ING~~~~--~--------------------- 213 (306)
T 1sdd_A 190 -------------------FDE--SKSW-----NQ-----TSS--LMYTVNGYVNG--T--------------------- 213 (306)
T ss_dssp -------------------EET--TSSS-----SC-----CCC--EEECSSSCCSS--C---------------------
T ss_pred -------------------ccc--cccc-----cc-----CCC--cceeeCCEecC--C---------------------
Confidence 000 0000 00 000 12467886652 0
Q ss_pred CCCCCCCcccceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCC
Q psy978 463 DRCADSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAP 542 (695)
Q Consensus 463 ~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~ 542 (695)
...+.++.|++|.|.|+|.+.. ...||||||||.|++ . | .
T Consensus 214 ----------~p~l~v~~G~~vrlrliN~g~~-~~~h~~hlhG~~~~~---d--G------------------------~ 253 (306)
T 1sdd_A 214 ----------MPDITVCAHDHISWHLIGMSSG-PELFSIHFNGQVLEQ---N--H------------------------H 253 (306)
T ss_dssp ----------CCCCCCCCC------BBCCCSS-SCEECCBCSSTTCEE---T--T------------------------E
T ss_pred ----------CcceEEcCCCEEEEEEEeCCCC-CccEEEEECCcEeee---C--C------------------------E
Confidence 1136678899999999998731 246999999999986 1 1 1
Q ss_pred ccceeEeCCCCEEEEEEEecCceeeEEeecchhhhhcCceEEEEecc
Q psy978 543 LKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGE 589 (695)
Q Consensus 543 ~rDTv~Vp~~G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~ 589 (695)
++||+.|.+|+.+.|+|++++||.|+||||+++|++.||+.+|.|.+
T Consensus 254 ~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 254 KISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp ECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC----
T ss_pred EcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEec
Confidence 69999999999999999999999999999999999999999999963
No 43
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.80 E-value=1.7e-18 Score=184.56 Aligned_cols=246 Identities=18% Similarity=0.206 Sum_probs=154.1
Q ss_pred CeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCccceeEEeEEEEc
Q psy978 212 PTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSY 291 (695)
Q Consensus 212 ~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~ 291 (695)
..|++||+.. .++++|++|+++++|++|.......+.+|+||.. +.||... ...|.
T Consensus 59 ~~~~~ng~~p--------------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~ 114 (327)
T 1kbv_A 59 RYWTFDGDVP--------------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTA 114 (327)
T ss_dssp EEEEETTBSS--------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBC
T ss_pred EEEEECCccC--------------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeec
Confidence 5689999732 2689999999999999999753225567777752 6788653 12489
Q ss_pred CCceEEEEEEcCCCCcceEEEEeeccCCCcccCCcceEEEEEEcCCCCCCCCCCccCCcccCCccccCCCCCCcCCCccc
Q psy978 292 AGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATRTSGTVLNPLNTPSRQAKST 371 (695)
Q Consensus 292 pGeR~dVlv~a~~~~g~Y~Ir~~~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 371 (695)
|||++++.+++++ +|+||.+.+........ ......+++.... .. .|.++
T Consensus 115 PG~~~~y~f~~~~-~Gt~wyH~h~~~~~~~~-~~Gl~G~~iV~~~--~~----~p~~d---------------------- 164 (327)
T 1kbv_A 115 PGRTSTFSFKALQ-PGLYIYHCAVAPVGMHI-ANGMYGLILVEPK--EG----LPKVD---------------------- 164 (327)
T ss_dssp TTEEEEEEEECCS-CEEEEEECCCSSHHHHH-HTTCEEEEEEECT--TC----CCCCS----------------------
T ss_pred CCCEEEEEEECCC-CeEEEEEeCCCChhhhh-hcceEEEEEEecC--CC----CCCCc----------------------
Confidence 9999999999987 59999986532100000 0112233443321 10 11111
Q ss_pred ccccccccCCCCCCCccccCCceEEEEEEe-eeecCCCCcccccccccccc-cccccccccccCCccccCCCCccccccc
Q psy978 372 LISELSTVHSASSDVRLQDRANLTFYISYD-FYEIDNPHFHLSTLYGFDEV-KRLEKVRTPQLNHLSFRFPTFPLLSQRD 449 (695)
Q Consensus 372 ~~~~l~~~~~~~~~~~~~~~~d~~~~l~~~-~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~iN~~s~~~P~~PlL~~~~ 449 (695)
..+.+.++ ++............+..... ...+ -.+.|||+.+..
T Consensus 165 ----------------------~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~iNG~~~~~---------- 210 (327)
T 1kbv_A 165 ----------------------KEFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQP--EYVVFNGHVGAL---------- 210 (327)
T ss_dssp ----------------------EEEEEEEEEECBSSCTTCCEEECBCHHHHHHTCC--SEEEETTSTTTT----------
T ss_pred ----------------------eEEEEEeeeeeccCccccccccccChhHhccCCC--ceEEEcCcccCC----------
Confidence 11111110 00000000000000000000 0000 123466654321
Q ss_pred cCCccccccCCccCCCCCCCcccceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhccc
Q psy978 450 QIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMD 529 (695)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~ 529 (695)
+. ...+.++.|+++.|.|+|.+. ...|+||||||.|+||+.+ |.
T Consensus 211 --------------------~~-~~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~D--G~----------- 254 (327)
T 1kbv_A 211 --------------------TG-DNALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVE--GG----------- 254 (327)
T ss_dssp --------------------SG-GGCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGG--GS-----------
T ss_pred --------------------CC-ceeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcC--CC-----------
Confidence 01 135789999999999999863 4579999999999999865 21
Q ss_pred ccccccCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEeecchhhh-hcCceEEEEecc
Q psy978 530 AKGLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHV-ETGMALVFKVGE 589 (695)
Q Consensus 530 ~~g~~~~n~~~P~~rDTv~Vp~~G~~vIRF~AdNPG~Wl~HCHi~~H~-~~GM~~v~~V~~ 589 (695)
+..|.++||+.|.+|+...|.|++++||.|+||||+.+|. ..||+++|.+..
T Consensus 255 --------~~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g 307 (327)
T 1kbv_A 255 --------KLINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEG 307 (327)
T ss_dssp --------SCEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEES
T ss_pred --------cCCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECC
Confidence 1126689999999999999999999999999999999995 889999999964
No 44
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.78 E-value=5.1e-18 Score=182.01 Aligned_cols=91 Identities=22% Similarity=0.306 Sum_probs=75.1
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCC--ccceeEeCC
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAP--LKDTVTVPD 551 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~--~rDTv~Vp~ 551 (695)
..+.++.|+++.|++.|.+ ...|++|+|||.|+|+.. |. +..++ ++||+.|++
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d---G~-------------------~~~~p~~~~dtv~l~p 285 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT---GK-------------------FRNPPDLDQETWLIPG 285 (340)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT---CC-------------------TTSCCEEEESCCCBCT
T ss_pred CceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC---Cc-------------------ccCCccccceEEEeCC
Confidence 3578899999988877765 457899999999999842 21 11233 479999999
Q ss_pred CCEEEEEEEecCceeeEEeecchh-hhhcCceEEEEecc
Q psy978 552 GGFTIIRFHATNPGYWLFHCHIEF-HVETGMALVFKVGE 589 (695)
Q Consensus 552 ~G~~vIRF~AdNPG~Wl~HCHi~~-H~~~GM~~v~~V~~ 589 (695)
|+.+.|.|++++||.|+||||+++ |++.||+++|+|..
T Consensus 286 Ger~~v~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~ 324 (340)
T 2bw4_A 286 GTAGAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTG 324 (340)
T ss_dssp TEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred CceEEEEEECCCCeeeEEEcCchHHHHhCCCEEEEEECC
Confidence 999999999999999999999995 99999999999964
No 45
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.78 E-value=8.1e-20 Score=214.10 Aligned_cols=87 Identities=22% Similarity=0.389 Sum_probs=77.3
Q ss_pred eeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCE
Q psy978 475 VVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGF 554 (695)
Q Consensus 475 ~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~ 554 (695)
.+.++.|++|.|+|+|.+. ....||||||||.|+|++.+ +.++||+.|++|+.
T Consensus 369 ~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d--------------------------g~~~Dtv~l~Pg~~ 421 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE--------------------------EYKMALYNLYPGVF 421 (770)
T ss_dssp CCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS--------------------------CCEESEEECCTTCC
T ss_pred CeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC--------------------------CceeeEEEECCCeE
Confidence 4778999999999999873 13479999999999998532 12899999999999
Q ss_pred EEEEEEecCceeeEEeecchhhhhcCceEEEEec
Q psy978 555 TIIRFHATNPGYWLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 555 ~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
+.|+|+|||||.|+||||+++|++.||+++|.|.
T Consensus 422 ~~v~~~ad~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 422 ETVEMLPSKAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp CEEEECCSSCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred EEEEEEeCCCCceEEEeccccccccccccccccc
Confidence 9999999999999999999999999999999984
No 46
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.71 E-value=8.2e-16 Score=164.32 Aligned_cols=90 Identities=17% Similarity=0.209 Sum_probs=71.0
Q ss_pred eeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCC--ccceeEeCCC
Q psy978 475 VVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAP--LKDTVTVPDG 552 (695)
Q Consensus 475 ~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~--~rDTv~Vp~~ 552 (695)
.+.++.|+++.|++.|.+ ...|++++|||.|+|++ + |. +..++ ++||+.|++|
T Consensus 226 ~l~v~~Ger~Rl~n~~~~---~~~~~h~i~~h~~~Vi~-d--G~-------------------~~~~p~~~~dtv~l~pG 280 (333)
T 1mzy_A 226 ALKAKVGDNVLFVHSQPN---RDSRPHLIGGHGDLVWE-T--GK-------------------FHNAPERDLETWFIRGG 280 (333)
T ss_dssp CEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEET-T--CC-------------------TTSCCEEEESBCCBCTT
T ss_pred ceEecCCCEEEEEECCCC---CccccEEECCCCeEEEe-C--Cc-------------------ccCCCccCcceEEECCC
Confidence 478899999988777654 22344446778888875 2 21 11222 5899999999
Q ss_pred CEEEEEEEecCceeeEEeecchhhh-hcCceEEEEecc
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEFHV-ETGMALVFKVGE 589 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~H~-~~GM~~v~~V~~ 589 (695)
+.+.|.|.+++||.|+||||++.|+ +.|||.+|+|..
T Consensus 281 er~~v~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 281 TAGAALYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEG 318 (333)
T ss_dssp EEEEEEEECCSCEEEEEEESSHHHHHTTCCEEEEEEES
T ss_pred ceEEEEEEcCCCEEEEEecChhhhHhhCCCEEEEEEcC
Confidence 9999999999999999999999997 999999999964
No 47
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.66 E-value=9e-15 Score=156.44 Aligned_cols=91 Identities=22% Similarity=0.260 Sum_probs=72.4
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCC--ccceeEeCC
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAP--LKDTVTVPD 551 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~--~rDTv~Vp~ 551 (695)
..+.++.|+++.|+..+.+ ...+++++|||.|.|+. + |. +..|+ ++||+.|++
T Consensus 225 ~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~-D--G~-------------------~~~p~~~~~dtv~i~p 279 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE-T--GK-------------------FANPPQRDLETWFIRG 279 (336)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET-T--CC-------------------TTSCCEEEESBCCBCT
T ss_pred cceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC-C--Cc-------------------CcCCccccceEEEECC
Confidence 4588999999987655543 33466667999999984 2 21 11233 479999999
Q ss_pred CCEEEEEEEecCceeeEEeecchhhh-hcCceEEEEecc
Q psy978 552 GGFTIIRFHATNPGYWLFHCHIEFHV-ETGMALVFKVGE 589 (695)
Q Consensus 552 ~G~~vIRF~AdNPG~Wl~HCHi~~H~-~~GM~~v~~V~~ 589 (695)
|+...+.|.+++||.|+||||.+.|. +.||+++|.|..
T Consensus 280 Ger~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~ 318 (336)
T 1oe1_A 280 GSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEG 318 (336)
T ss_dssp TEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred CCcEEEEEEcCCCceEEEEechhhccccCCCeEEEEECC
Confidence 99999999999999999999999986 999999999964
No 48
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.65 E-value=2.7e-15 Score=166.55 Aligned_cols=93 Identities=25% Similarity=0.396 Sum_probs=80.2
Q ss_pred eeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCE
Q psy978 475 VVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGF 554 (695)
Q Consensus 475 ~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~ 554 (695)
.+.++.|++|.|.|+|.+. ...|+||+||+.|.|++.+ |.. ..|.+.|++.|.+|+.
T Consensus 205 ~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~D--G~~-------------------~~p~~~~~~~l~pg~r 261 (442)
T 2zoo_A 205 SLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVE--GGS-------------------LKNHNVQTTLIPAGGA 261 (442)
T ss_dssp CEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGG--GSS-------------------CEECSBSEEEECTTEE
T ss_pred ceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecC--Ccc-------------------CCCccceEEEECCCee
Confidence 4788999999999999762 3579999999999999865 211 1266899999999999
Q ss_pred EEEEEEecCceeeEEeecchhh-hhcCceEEEEeccC
Q psy978 555 TIIRFHATNPGYWLFHCHIEFH-VETGMALVFKVGEH 590 (695)
Q Consensus 555 ~vIRF~AdNPG~Wl~HCHi~~H-~~~GM~~v~~V~~~ 590 (695)
..|.|++++||.|++|||...| ...||+++|.|...
T Consensus 262 ~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~ 298 (442)
T 2zoo_A 262 AIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGP 298 (442)
T ss_dssp EEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESC
T ss_pred EEEEEEcCCCCeEEEEecccccccccCceEEEEecCC
Confidence 9999999999999999999999 58999999999654
No 49
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.63 E-value=5.6e-15 Score=164.08 Aligned_cols=220 Identities=12% Similarity=0.027 Sum_probs=145.0
Q ss_pred CceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEee-CCCccCCCCCCCCCC-----CccccCCCCCCeEEEE
Q psy978 61 GVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHW-HGHHQVDSPYMDGVP-----HLTQCPVPPRSTFRYK 134 (695)
Q Consensus 61 G~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~-HGl~~~~~~~~DG~p-----~vtqcpI~PG~~~tY~ 134 (695)
|.....++|||+. .|+|+|++| ++++||.|........+|+ ||..+... ..||.+ .+++..|.|||++++.
T Consensus 179 ~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi-~~DG~~~~~P~~~~~l~l~pgeR~dvl 255 (451)
T 2uxt_A 179 GFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVI-SGDQGFLPAPVSVKQLSLAPGERREIL 255 (451)
T ss_dssp CCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEE-ECSSSEEEEEEEESSEEECTTCEEEEE
T ss_pred CCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEE-EeCCCccCCceEeceEEECceeEEEEE
Confidence 4455789999985 699999999 9999999999777899999 89776543 589964 3567889999999999
Q ss_pred EEcCCCeeeEEEccccCcCCCCce------------eEEEEeCCCCCCCCCCCCCCCCCceEEEEeeecccc--h--hhh
Q psy978 135 FNADSPGTHFWHSHTGSQRGDGSF------------GAFIIRKPRPREVHAPLYDFDLPEHIMLITDWSHVL--G--VEM 198 (695)
Q Consensus 135 f~~~~~GT~wYHsH~~~q~~~Gl~------------G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~dw~~~~--~--~~~ 198 (695)
+++++.|+||++++........+. ..+-+.......+.....+.. |..+.... . ...
T Consensus 256 v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~p~~-------L~~~~~~~~~~~~~~~ 328 (451)
T 2uxt_A 256 VDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMR-------LLPTEIMAGSPIRSRD 328 (451)
T ss_dssp EECTTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----CCCSC-------SSSSCCCCCCCSEEEE
T ss_pred EEeCCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccccCccc-------cCCCCCCCCCCcceEE
Confidence 999989999999986543222111 111121111000000000000 00000000 0 000
Q ss_pred hhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCC
Q psy978 199 FNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGG 278 (695)
Q Consensus 199 ~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~ 278 (695)
+. .. ..|+|||+.... +...+.++.|++++|+|+|. . .+.|||+||.|+|++.||.
T Consensus 329 ~~--l~-------~~~~iNg~~f~~-----------~~~~~~~~~G~~~~~~l~N~--~--~HP~HLHGh~F~Vl~~~G~ 384 (451)
T 2uxt_A 329 IS--LG-------DDPGINGQLWDV-----------NRIDVTAQQGTWERWTVRAD--E--PQAFHIEGVMFQIRNVNGA 384 (451)
T ss_dssp EE--EC-------SSSSBTTBCCCT-----------TCCCEEEETTCEEEEEEEEE--E--EEEEEETTCEEEEEEETTB
T ss_pred EE--Ee-------eEEEECCEeCCC-----------CCCcEEcCCCCEEEEEEECC--C--CcCeEECCceEEEEeeCCc
Confidence 00 00 047899985431 11358899999999999998 2 4679999999999999998
Q ss_pred cc---ceeEEeEEEEcCCceEEEEEEcCCCC---cceEEEEeec
Q psy978 279 DI---KPISVGSIVSYAGERWDFILNATHHV---GNYWIKMRGL 316 (695)
Q Consensus 279 ~v---~p~~~d~l~l~pGeR~dVlv~a~~~~---g~Y~Ir~~~~ 316 (695)
++ +|...|+|.| ||++.|+++++++. |.|.+.++-+
T Consensus 385 ~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil 426 (451)
T 2uxt_A 385 MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTL 426 (451)
T ss_dssp CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSH
T ss_pred CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCch
Confidence 76 4789999999 99999999998752 3377777644
No 50
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.60 E-value=4.8e-15 Score=164.21 Aligned_cols=221 Identities=12% Similarity=0.100 Sum_probs=154.6
Q ss_pred CceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCC-----ccccCCCCCCeEEEEE
Q psy978 61 GVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPH-----LTQCPVPPRSTFRYKF 135 (695)
Q Consensus 61 G~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~-----vtqcpI~PG~~~tY~f 135 (695)
|.....++|||+. .|.|+|++| ++++|+.|........+|++|...... +.||.+- +..-.|.|||+++..+
T Consensus 174 g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi-~~DG~~~~~p~~~~~l~l~pgeR~dv~v 250 (439)
T 2xu9_A 174 GKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLI-AADGGFLEEPLEVSELLLAPGERAEVLV 250 (439)
T ss_dssp CCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEE-EETTEEEEEEEEESCEEECTTCEEEEEE
T ss_pred CCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEE-ecCCCCCCCceEeceEEECCceeEEEEE
Confidence 3445689999987 699999999 999999999877789999999876544 5799762 3445689999999999
Q ss_pred EcCCCeeeEEEccccCcCCC---Cc--------------eeEEEEeCCCC--CCCCC-CC---CCCCCC--ceEEEEeee
Q psy978 136 NADSPGTHFWHSHTGSQRGD---GS--------------FGAFIIRKPRP--REVHA-PL---YDFDLP--EHIMLITDW 190 (695)
Q Consensus 136 ~~~~~GT~wYHsH~~~q~~~---Gl--------------~G~lIV~~~~~--~~p~~-~~---~d~d~~--e~~l~l~dw 190 (695)
+++++|.||++|+....-.. || ....+++-... ..+.. .+ .+...+ ...+.+.-
T Consensus 251 ~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~l~~~~~l~~~~~~r~~~l~~- 329 (439)
T 2xu9_A 251 RLRKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKALSPFPTLPAPVVTRRLVLTE- 329 (439)
T ss_dssp ECCSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCCCCCSCCCCCCCCCCCSEEEEEEEEE-
T ss_pred EcCCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccccCcccCCCcccCCCCCcceEEEEEe-
Confidence 99999999999984311100 21 22233332111 11100 00 000000 01111110
Q ss_pred cccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcce
Q psy978 191 SHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTL 270 (695)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~ 270 (695)
. . .+..|+|||+.... +...+.++.|++++|+|.|.+... +-||||||.|
T Consensus 330 ----~-------~------~g~~~~iNg~~~~~-----------~~~~~~~~~g~~~~~~~~N~~~~~--HP~HLHG~~F 379 (439)
T 2xu9_A 330 ----D-------M------MAARFFINGQVFDH-----------RRVDLKGQAQTVEVWEVENQGDMD--HPFHLHVHPF 379 (439)
T ss_dssp ----E-------G------GGTEEEETTBCCCT-----------TCCCEEECTTCEEEEEEEECSSSC--EEEEESSCCB
T ss_pred ----e-------c------cCceEeECCEECCC-----------CCCceecCCCCEEEEEEEcCCCCC--CCceeCCCcE
Confidence 0 0 11368999995431 113478999999999999998765 5699999999
Q ss_pred eEecCCCCcc-ceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeec
Q psy978 271 TAINSDGGDI-KPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGL 316 (695)
Q Consensus 271 ~Via~DG~~v-~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~ 316 (695)
.|++.+|... .|...|++.|.||+++.|.++++++ |.|.+.++-+
T Consensus 380 ~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adnp-G~w~~HCHil 425 (439)
T 2xu9_A 380 QVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLREK-GRTVFHCHIV 425 (439)
T ss_dssp EEEEETTEECSSCCCBSEEEECTTCEEEEEEECCSC-EEEEEEESSH
T ss_pred EEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCCC-CCEEEECCcc
Confidence 9999999765 5889999999999999999998865 8888887644
No 51
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.55 E-value=1.5e-15 Score=134.19 Aligned_cols=89 Identities=20% Similarity=0.275 Sum_probs=71.9
Q ss_pred CCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCC--CCCCCCCCccccCCCCCCeEEEEEEc-CCCeeeEEEc
Q psy978 71 RQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDS--PYMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHS 147 (695)
Q Consensus 71 G~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~--~~~DG~p~vtqcpI~PG~~~tY~f~~-~~~GT~wYHs 147 (695)
-+|++|+|+|++||+|+ ++|.+ ..++++||||..++.. ..+||.+ .+++.|.||++++|.|++ +++|+|||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~-~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C 89 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNK-LPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYC 89 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECS-SCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEEC
T ss_pred cEEeCCEEEEcCCCEEE--EEECC-CCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEe
Confidence 36788999999999975 57986 4789999999876431 0133332 467899999999999999 7999999999
Q ss_pred cccCcCCCCceeEEEEeC
Q psy978 148 HTGSQRGDGSFGAFIIRK 165 (695)
Q Consensus 148 H~~~q~~~Gl~G~lIV~~ 165 (695)
| .+...||.|.|+|.+
T Consensus 90 ~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 90 A--PHRGAGMVGKITVEG 105 (105)
T ss_dssp T--TTGGGTCEEEEEECC
T ss_pred C--CchhcCCEEEEEEcC
Confidence 9 566789999999964
No 52
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.52 E-value=2.2e-14 Score=149.12 Aligned_cols=102 Identities=25% Similarity=0.445 Sum_probs=87.2
Q ss_pred EEEcCCC--CCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCC--------CCccccCCCCCCeEEEEEE
Q psy978 67 TVVNRQL--PGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGV--------PHLTQCPVPPRSTFRYKFN 136 (695)
Q Consensus 67 ~~iNG~~--PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~--------p~vtqcpI~PG~~~tY~f~ 136 (695)
|+|||+. ++|.|+|++||+|+++|.|... ..+++||||...... .+|. ....++.|.||++++|.|+
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~ 233 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQII 233 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEE
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCC-cceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEE
Confidence 5899998 8999999999999999999974 799999999876442 3442 1345677999999999999
Q ss_pred cC---CCeeeEEEccccCcCCCCceeEEEEeCCCCCCC
Q psy978 137 AD---SPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREV 171 (695)
Q Consensus 137 ~~---~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~p 171 (695)
++ ++|+||||||...+...||.|.|+|.+++...|
T Consensus 234 ~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~~~p 271 (276)
T 3kw8_A 234 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIP 271 (276)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCCT
T ss_pred eccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCCCCC
Confidence 97 699999999999999999999999998765443
No 53
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.49 E-value=4.5e-13 Score=150.80 Aligned_cols=247 Identities=11% Similarity=0.097 Sum_probs=153.7
Q ss_pred EEEEEEcCCCC--------CCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC----CccccCCCCCCeE
Q psy978 64 RAITVVNRQLP--------GPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP----HLTQCPVPPRSTF 131 (695)
Q Consensus 64 ~~~~~iNG~~P--------GP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p----~vtqcpI~PG~~~ 131 (695)
-..++|||+.. .|+|+|++|+++++||.|........+|++|..+... ..||.+ .+..-.|.|||++
T Consensus 165 ~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi-~~DG~~~~p~~~~~l~l~pgeR~ 243 (503)
T 1hfu_A 165 PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTII-EVDGELTEPHTVDRLQIFTGQRY 243 (503)
T ss_dssp CSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEE-EETTEEEEEEEESBEEECTTCEE
T ss_pred CCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEE-eccCccccccccCeEEEcccceE
Confidence 35789999753 3899999999999999999877789999999876544 589965 2333458999999
Q ss_pred EEEEEcCC-CeeeEEEccccC--c-----CCCCceeEEEEeCCC-CCCCCCCCCCC--CCCceEEEEeeecccchhh-hh
Q psy978 132 RYKFNADS-PGTHFWHSHTGS--Q-----RGDGSFGAFIIRKPR-PREVHAPLYDF--DLPEHIMLITDWSHVLGVE-MF 199 (695)
Q Consensus 132 tY~f~~~~-~GT~wYHsH~~~--q-----~~~Gl~G~lIV~~~~-~~~p~~~~~d~--d~~e~~l~l~dw~~~~~~~-~~ 199 (695)
+..+++++ +|+||.+++... + ...|+..+++..... ...|....... .+.+.. |.......... ..
T Consensus 244 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~l~~~~--l~p~~~~~~p~~~~ 321 (503)
T 1hfu_A 244 SFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEAD--LHALIDPAAPGIPT 321 (503)
T ss_dssp EEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSCCBCCGGG--CBBSSSCSCSSCSS
T ss_pred EEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCccCCCcccc--ccccCccCCCCccc
Confidence 99999976 799999998541 1 223443344443322 11121110000 000000 00000000000 00
Q ss_pred h-c---ccCCCCCCCCCeeeeCCCCCCcccC-------CCC---CcCCCCceeEEEecCcEEEEEEEe-CCCCCccEEEE
Q psy978 200 N-A---HHHADGDNKPPTILMNGKGRFKEFR-------SNA---TVTYTPMEVFTVKQGHSYRFRIIN-AGYLNCPIELS 264 (695)
Q Consensus 200 ~-~---~~~~~~~~~~~~~lING~~~~~~~~-------~~~---~~~~~~~~~~~v~~G~~~rlRliN-a~~~~~~~~~~ 264 (695)
. . ............|+|||+....... ... .........+.++.|++++++++| .+.. .+.||
T Consensus 322 ~~~~~~~~~l~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~--~HP~H 399 (503)
T 1hfu_A 322 PGAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGG--PHPFH 399 (503)
T ss_dssp TTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTC--CCEEE
T ss_pred CCcceEEEEEEeeccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCC--CCCEE
Confidence 0 0 0000000011268899985431100 000 000011357899999999999995 4444 45699
Q ss_pred EcCcceeEecCCCCc----cceeEEeEEEE-cCCceEEEEEEcCCCCcceEEEEeec
Q psy978 265 IANHTLTAINSDGGD----IKPISVGSIVS-YAGERWDFILNATHHVGNYWIKMRGL 316 (695)
Q Consensus 265 i~gh~~~Via~DG~~----v~p~~~d~l~l-~pGeR~dVlv~a~~~~g~Y~Ir~~~~ 316 (695)
||||.|.|++.+|.. ..|...|++.| .||+++.|.++++++ |.|.++.+-.
T Consensus 400 LHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adnP-G~W~~HCHil 455 (503)
T 1hfu_A 400 LHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNP-GPWFFHCHIE 455 (503)
T ss_dssp ETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCSC-EEEEEEESSH
T ss_pred EecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCCC-eeeeEecCch
Confidence 999999999999865 36889999999 899999999999876 8888887654
No 54
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.48 E-value=5.2e-13 Score=150.85 Aligned_cols=245 Identities=12% Similarity=0.106 Sum_probs=153.7
Q ss_pred EEEEEEcCCCC---------CCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC----CccccCCCCCCe
Q psy978 64 RAITVVNRQLP---------GPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP----HLTQCPVPPRST 130 (695)
Q Consensus 64 ~~~~~iNG~~P---------GP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p----~vtqcpI~PG~~ 130 (695)
...++|||+.. -|+|+|++|+++++||.|........+|++|...... ..||.+ .+..-.|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi-~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVI-EVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEE-EETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEE-ecCCccccceeeeeEEEcccce
Confidence 35789999753 2899999999999999999877788999999876543 589965 234456899999
Q ss_pred EEEEEEcCC-CeeeEEEccccC---cCCCCceeEEEEeCCCC-CCCCCCCCC-CCCCceEE-EEeeecc-cch---hhhh
Q psy978 131 FRYKFNADS-PGTHFWHSHTGS---QRGDGSFGAFIIRKPRP-REVHAPLYD-FDLPEHIM-LITDWSH-VLG---VEMF 199 (695)
Q Consensus 131 ~tY~f~~~~-~GT~wYHsH~~~---q~~~Gl~G~lIV~~~~~-~~p~~~~~d-~d~~e~~l-~l~dw~~-~~~---~~~~ 199 (695)
++..+++++ +|+||.+++... ....|+..+++...... ..|.....+ ....+.-| -+..... ... ....
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~ 349 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADI 349 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSSE
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcccccchhhcccCCcccCCCcccCCcceE
Confidence 999999976 699999998542 12234434444433221 112111000 00000000 0000000 000 0000
Q ss_pred hcccCCCCCCCCCeeeeCCCCCCcccCCCC------------CcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcC
Q psy978 200 NAHHHADGDNKPPTILMNGKGRFKEFRSNA------------TVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIAN 267 (695)
Q Consensus 200 ~~~~~~~~~~~~~~~lING~~~~~~~~~~~------------~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~g 267 (695)
..............|.|||+..... ... .........+.++.|++++|+++| ... +-|||||
T Consensus 350 ~~~l~~~~~~~~~~~~iNg~~~~~~--~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N--~~~--HP~HLHG 423 (521)
T 1v10_A 350 NLNLRIGRNATTADFTINGAPFIPP--TVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG--GGN--HPFHLHG 423 (521)
T ss_dssp EEECCEECCSSSSCCEESSCCCCCC--SSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC--CBS--CEEEESS
T ss_pred EEEEEEecCCceeEEEECCCcccCC--CCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC--CCC--CCEEEcc
Confidence 0000000011113688999854311 000 000012357899999999999999 343 5699999
Q ss_pred cceeEecCCCCc----cceeEEeEEEE-cCCceEEEEEEcCCCCcceEEEEeec
Q psy978 268 HTLTAINSDGGD----IKPISVGSIVS-YAGERWDFILNATHHVGNYWIKMRGL 316 (695)
Q Consensus 268 h~~~Via~DG~~----v~p~~~d~l~l-~pGeR~dVlv~a~~~~g~Y~Ir~~~~ 316 (695)
|.|.|++.+|.. ..|...|++.| .||+++.|.++++++ |.|.++.+-.
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNP-G~W~~HCHi~ 476 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNP-GPWFLHCHID 476 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSC-EEEEEEESCH
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCCC-eeEEEeeChH
Confidence 999999999865 36889999999 799999999999876 8888887654
No 55
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.45 E-value=1.1e-13 Score=130.66 Aligned_cols=100 Identities=15% Similarity=0.193 Sum_probs=76.3
Q ss_pred CCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCC------CCcc-ccCCCCCC--e
Q psy978 60 DGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGV------PHLT-QCPVPPRS--T 130 (695)
Q Consensus 60 dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~------p~vt-qcpI~PG~--~ 130 (695)
.|+..+-+.++|. |+|+|+|++||+|+|+|+|... ...|++.+.+.++++.+.. ++.. .-+|.||+ +
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~---~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt 121 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK---GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGY 121 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT---TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC---CeeeEEEEeecCcchhccccccccccccccccccCCCCceE
Confidence 4455555667776 6799999999999999999732 4467777776655443311 0100 01689999 9
Q ss_pred EEEEEEcCCCeeeEEEccccCcCCCCceeEEEEe
Q psy978 131 FRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIR 164 (695)
Q Consensus 131 ~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~lIV~ 164 (695)
++|.|++ ++||||||||...|+..||+|.|||+
T Consensus 122 ~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 122 TDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999999 99999999999999999999999984
No 56
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.41 E-value=4.3e-12 Score=141.33 Aligned_cols=231 Identities=12% Similarity=0.066 Sum_probs=152.1
Q ss_pred ceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC-----CccccCCCCCCeEEEEEE
Q psy978 62 VKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP-----HLTQCPVPPRSTFRYKFN 136 (695)
Q Consensus 62 ~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p-----~vtqcpI~PG~~~tY~f~ 136 (695)
.....++|||+. .|+|.|++|+ ++|+.|........+|++|...... +.||.. .++.-.|.|||+++..++
T Consensus 209 ~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vI-a~DGg~~~~P~~~~~l~l~pgeR~dvlv~ 284 (481)
T 3zx1_A 209 REGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILV-GTDGGLIEKTIYKEELFLSPASRVEVLID 284 (481)
T ss_dssp CCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEE-EETTEEEEEEEEESSEEECTTCEEEEEEE
T ss_pred CcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEE-EcCCCccCCceEeCeEEECCccEEEEEEE
Confidence 344689999986 5899999999 9999999988899999999886544 689733 234456999999999999
Q ss_pred cCCCeeeEEEccccCcCC------CCceeEEEEeCC--CCCCCCC----CCCCCCCCceEEEEeeecccchhhhhhcccC
Q psy978 137 ADSPGTHFWHSHTGSQRG------DGSFGAFIIRKP--RPREVHA----PLYDFDLPEHIMLITDWSHVLGVEMFNAHHH 204 (695)
Q Consensus 137 ~~~~GT~wYHsH~~~q~~------~Gl~G~lIV~~~--~~~~p~~----~~~d~d~~e~~l~l~dw~~~~~~~~~~~~~~ 204 (695)
+.+.|+|..-++...... ..-.-.+.++.. ....|.. ...+.....+.+.++....+.. .+.
T Consensus 285 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~~--~~~---- 358 (481)
T 3zx1_A 285 APKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMH--GMM---- 358 (481)
T ss_dssp CSSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCCCCCCCCEEEEEEEEECCSTTT--TGG----
T ss_pred cCCCcEEEEEEecccccCccccCCCCceeEEEEecCCCCccCCccccCCCCCCCCCcEEEEEEeccchhcc--ccc----
Confidence 998898887775432210 000112222211 1111110 0001000123344432211000 000
Q ss_pred CCCCC-----CCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecC--CC
Q psy978 205 ADGDN-----KPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINS--DG 277 (695)
Q Consensus 205 ~~~~~-----~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~--DG 277 (695)
..+.. ....++|||+.... ..+.+.++.|++++|+|+|.+... +.||||||.|+|++. +|
T Consensus 359 ~~~~~~~~~~~~~~~~iNG~~~~~-----------~~~~~~~~~G~~v~w~l~N~~~~~--Hp~HlHG~~F~vl~~~~~g 425 (481)
T 3zx1_A 359 GKSEGELKIALASMFLINRKSYDL-----------KRIDLSSKLGVVEDWIVINKSHMD--HPFHIHGTQFELISSKLNG 425 (481)
T ss_dssp GCCHHHHHHHHHTTEEETTBCCCT-----------TCCCEEEETTCCEEEEEEECSSSC--EEEEETTCCEEEEEEEETT
T ss_pred ccccccccccccceeEECCEeCCC-----------CCceEEeCCCCEEEEEEEcCCCCc--eeEEEeccEEEEEEecccC
Confidence 00000 01348999995431 113689999999999999987654 679999999999999 99
Q ss_pred Ccc---ceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeec
Q psy978 278 GDI---KPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGL 316 (695)
Q Consensus 278 ~~v---~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~ 316 (695)
... ++.+.|+|.|.|||++.|.++|+++ |.|.+.++.+
T Consensus 426 ~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~p-G~w~~HCHil 466 (481)
T 3zx1_A 426 KVQKAEFRALRDTINVRPNEELRLRMKQDFK-GLRMYHCHIL 466 (481)
T ss_dssp EEEECSSCCEESEEEECTTCEEEEEECCCSC-EEEEEEESSH
T ss_pred CCCCcccCcccceEEECCCCEEEEEEEcCCC-eeEEEEcCCh
Confidence 766 3578999999999999999999765 8888877543
No 57
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.38 E-value=2e-11 Score=136.66 Aligned_cols=245 Identities=11% Similarity=0.086 Sum_probs=152.3
Q ss_pred EEEEEEcCCC---------CCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC----CccccCCCCCCe
Q psy978 64 RAITVVNRQL---------PGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP----HLTQCPVPPRST 130 (695)
Q Consensus 64 ~~~~~iNG~~---------PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p----~vtqcpI~PG~~ 130 (695)
...++|||+- +-|.|+|++|+++++|+.|........+|++|..+... ..||.+ .+..-.|.|||+
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~vi-a~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTII-ETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEE-EETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEE-EeCCcccCCEEeeeEEEcCceE
Confidence 4689999963 34799999999999999999876788999999876544 589975 233456899999
Q ss_pred EEEEEEcCC-CeeeEEEcccc--C-cCCCCceeEEEEeCCCC-CCCCCCCCCCCCCceEEEEeeecccchhhh------h
Q psy978 131 FRYKFNADS-PGTHFWHSHTG--S-QRGDGSFGAFIIRKPRP-REVHAPLYDFDLPEHIMLITDWSHVLGVEM------F 199 (695)
Q Consensus 131 ~tY~f~~~~-~GT~wYHsH~~--~-q~~~Gl~G~lIV~~~~~-~~p~~~~~d~d~~e~~l~l~dw~~~~~~~~------~ 199 (695)
++..+++++ +|.||.++... . ....|...+++...... ..|.......+. .. +.+.....-... .
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~--~~--~~~~~L~p~~~~~~p~~~~ 322 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHT--KC--LIETDLHPLSRNGVPGNPH 322 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS--SB--CCGGGCCBSSCCCCSSCSS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc--cc--cccccccccccccCCCccC
Confidence 999999986 59999998743 1 12223333444443221 122111100000 00 000000000000 0
Q ss_pred hc----ccCCCCCCCCCeeeeCCCCCCccc--------CCC--CCcCCCCceeEEEecCcEEEEEEE-eCCCCCccEEEE
Q psy978 200 NA----HHHADGDNKPPTILMNGKGRFKEF--------RSN--ATVTYTPMEVFTVKQGHSYRFRII-NAGYLNCPIELS 264 (695)
Q Consensus 200 ~~----~~~~~~~~~~~~~lING~~~~~~~--------~~~--~~~~~~~~~~~~v~~G~~~rlRli-Na~~~~~~~~~~ 264 (695)
.. .....-......|+|||+.....- ... .........++.++.|++++|.|. |..... +.||
T Consensus 323 ~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~--HP~H 400 (495)
T 3t6v_A 323 QGGADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGP--HPFH 400 (495)
T ss_dssp TTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCC--CEEE
T ss_pred CCCCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCC--ccee
Confidence 00 000000001236889998543110 000 000011124789999999999998 555544 5699
Q ss_pred EcCcceeEecCCCCcc----ceeEEeEEEEcC-CceEEEEEEcCCCCcceEEEEeec
Q psy978 265 IANHTLTAINSDGGDI----KPISVGSIVSYA-GERWDFILNATHHVGNYWIKMRGL 316 (695)
Q Consensus 265 i~gh~~~Via~DG~~v----~p~~~d~l~l~p-GeR~dVlv~a~~~~g~Y~Ir~~~~ 316 (695)
+|||.|.|++.+|... .|...|++.|.+ |+.+.|.++++++ |.+.++.+..
T Consensus 401 LHGh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnP-G~W~~HCHi~ 456 (495)
T 3t6v_A 401 LHGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNP-GPWFLHCHID 456 (495)
T ss_dssp ETTCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCSC-EEEEEEESCH
T ss_pred ecCCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCCC-eeEEEEecch
Confidence 9999999999988654 688999999997 9999999999976 8887887643
No 58
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.6e-11 Score=138.91 Aligned_cols=235 Identities=11% Similarity=0.074 Sum_probs=150.0
Q ss_pred EEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC----CccccCCCCCCeEEEEEEcCC
Q psy978 64 RAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP----HLTQCPVPPRSTFRYKFNADS 139 (695)
Q Consensus 64 ~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p----~vtqcpI~PG~~~tY~f~~~~ 139 (695)
...++|||+. .|+|+|++|+++++||.|........+|++|..+... ..||.+ .+..-.|.|||+++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi-~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVV-EIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEE-EETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEE-eccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4588999986 5999999999999999999877788999999776543 578865 234456899999999999964
Q ss_pred --CeeeEEEccccCcC----CC--CceeEEEEe-CCCCCCCCCC---CCC--CC---C-----------CceEEEEeeec
Q psy978 140 --PGTHFWHSHTGSQR----GD--GSFGAFIIR-KPRPREVHAP---LYD--FD---L-----------PEHIMLITDWS 191 (695)
Q Consensus 140 --~GT~wYHsH~~~q~----~~--Gl~G~lIV~-~~~~~~p~~~---~~d--~d---~-----------~e~~l~l~dw~ 191 (695)
.|.||..+...... .. ...+..|++ ......|... .++ .+ + .+..+.+.--
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~- 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVV- 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEE-
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEE-
Confidence 57999998754211 11 122223332 2211111000 000 00 0 0011111000
Q ss_pred ccchhhhhhcccCCCCCCCCCeeeeCCCCCCcc-c-------CC----CCCcCCC-CceeEEEecCcEEEEEEEeCCCCC
Q psy978 192 HVLGVEMFNAHHHADGDNKPPTILMNGKGRFKE-F-------RS----NATVTYT-PMEVFTVKQGHSYRFRIINAGYLN 258 (695)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~-~-------~~----~~~~~~~-~~~~~~v~~G~~~rlRliNa~~~~ 258 (695)
... .......++|||+..... . .. ....... ....+.++.|++++|.|.|.+...
T Consensus 324 -----------~~~-~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~ 391 (534)
T 1zpu_A 324 -----------MDN-LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGT 391 (534)
T ss_dssp -----------EEE-CTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSSC
T ss_pred -----------eec-cCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCCC
Confidence 000 011123578999853210 0 00 0000000 124688999999999999998664
Q ss_pred ccEEEEEcCcceeEecCCCC-----------c---------cceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeec
Q psy978 259 CPIELSIANHTLTAINSDGG-----------D---------IKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGL 316 (695)
Q Consensus 259 ~~~~~~i~gh~~~Via~DG~-----------~---------v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~ 316 (695)
+-||||||.|.|++.++. + ..|...|++.|.||+.+.|.++++++ |.|.++.+-.
T Consensus 392 --HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDNP-G~W~~HCHi~ 466 (534)
T 1zpu_A 392 --HPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNP-GVWFFHCHIE 466 (534)
T ss_dssp --EEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCSC-EEEEEEECCH
T ss_pred --CCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCCC-eeEEEEeCch
Confidence 569999999999998753 1 24789999999999999999999876 8888887644
No 59
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.33 E-value=4.8e-11 Score=133.64 Aligned_cols=243 Identities=12% Similarity=0.127 Sum_probs=150.0
Q ss_pred EEEEEEcCCC--------CCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC----CccccCCCCCCeE
Q psy978 64 RAITVVNRQL--------PGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP----HLTQCPVPPRSTF 131 (695)
Q Consensus 64 ~~~~~iNG~~--------PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p----~vtqcpI~PG~~~ 131 (695)
...++|||+- +-|.|+|++|+++++||.|........+|++|..+... ..||.+ .+..-.|.|||++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi-a~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTII-EVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEE-EETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEE-EECCcccCceEeeeEEECCCcEE
Confidence 4688999973 34799999999999999999877788999999876544 589875 2233458999999
Q ss_pred EEEEEcCC-CeeeEEEcccc--CcC-CCCceeEEEEeCCC-CCCCCCCCCCCCCCceEEEEeeecccchhhh------hh
Q psy978 132 RYKFNADS-PGTHFWHSHTG--SQR-GDGSFGAFIIRKPR-PREVHAPLYDFDLPEHIMLITDWSHVLGVEM------FN 200 (695)
Q Consensus 132 tY~f~~~~-~GT~wYHsH~~--~q~-~~Gl~G~lIV~~~~-~~~p~~~~~d~d~~e~~l~l~dw~~~~~~~~------~~ 200 (695)
+..+++++ +|.||..+... .+. ..|..-+++..... ...|...... +. .. +.+.....-... ..
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~-~~--~~--~~~~~L~p~~~~~~p~~~~~ 319 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTT-SV--KP--LNEVDLHPLVSTPVPGAPSS 319 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCC-CS--SB--CCGGGCCBSSCCCCSSCSST
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCC-CC--cc--cccccccccccccCCCcccC
Confidence 99999986 59999998742 111 12222233333321 1122111000 00 00 000000000000 00
Q ss_pred c----ccCCCCCCCCCeeeeCCCCCCccc--------CCCCC--cCCCCceeEEEecCcEEEEEEE---eCCCCCccEEE
Q psy978 201 A----HHHADGDNKPPTILMNGKGRFKEF--------RSNAT--VTYTPMEVFTVKQGHSYRFRII---NAGYLNCPIEL 263 (695)
Q Consensus 201 ~----~~~~~~~~~~~~~lING~~~~~~~--------~~~~~--~~~~~~~~~~v~~G~~~rlRli---Na~~~~~~~~~ 263 (695)
. .....-......|+|||+.....- ..... ........+.++.|++++|.|. |..... +.|
T Consensus 320 ~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~--HP~ 397 (499)
T 3pxl_A 320 GGVDKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAP--HPF 397 (499)
T ss_dssp TCSSEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCS--CEE
T ss_pred CCCcEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCC--ccc
Confidence 0 000000001236889998542100 00000 0011124789999999999999 444443 569
Q ss_pred EEcCcceeEecCCCCcc----ceeEEeEEEEcC---CceEEEEEEcCCCCcceEEEEee
Q psy978 264 SIANHTLTAINSDGGDI----KPISVGSIVSYA---GERWDFILNATHHVGNYWIKMRG 315 (695)
Q Consensus 264 ~i~gh~~~Via~DG~~v----~p~~~d~l~l~p---GeR~dVlv~a~~~~g~Y~Ir~~~ 315 (695)
|+|||.|.|++.+|... .|...|++.|.+ |+.+.|.++++++ |.+.++.+-
T Consensus 398 HLHGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnP-G~W~~HCHi 455 (499)
T 3pxl_A 398 HLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNP-GPWFLHCHI 455 (499)
T ss_dssp EETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSC-EEEEEEESS
T ss_pred eecCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCCC-ceEEEEeCC
Confidence 99999999999888543 689999999986 9999999999976 887787754
No 60
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.32 E-value=3.1e-12 Score=114.30 Aligned_cols=92 Identities=21% Similarity=0.105 Sum_probs=73.1
Q ss_pred CCCceEEE-EEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEc
Q psy978 59 ADGVKRAI-TVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNA 137 (695)
Q Consensus 59 ~dG~~~~~-~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~ 137 (695)
.+|..-.. ..+|++|++|.|+|++||+|+++++|... . +||+.... .|. ++.|.||++++|.|++
T Consensus 20 ~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~-~-----~H~~~i~~----~~~----~~~i~pG~~~~~~f~~ 85 (112)
T 1iby_A 20 VEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSP-I-----SEGFSIDA----FGV----QEVIKAGETKTISFTA 85 (112)
T ss_dssp ETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSS-S-----CEEEEEGG----GTE----EEEECTTCEEEEEEEC
T ss_pred eccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCC-C-----eEEEEEcC----CCc----eeEeCCCCEEEEEEEC
Confidence 45655555 48899999999999999999999999973 3 56655432 122 4579999999999999
Q ss_pred CCCeeeEEEccccCcCCCCceeEEEEeC
Q psy978 138 DSPGTHFWHSHTGSQRGDGSFGAFIIRK 165 (695)
Q Consensus 138 ~~~GT~wYHsH~~~q~~~Gl~G~lIV~~ 165 (695)
+++|+||||||...... +|.|.|+|.+
T Consensus 86 ~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 86 DKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp CSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred CCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 99999999999765543 3999999964
No 61
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.31 E-value=3.6e-11 Score=133.27 Aligned_cols=214 Identities=12% Similarity=0.054 Sum_probs=140.7
Q ss_pred CceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEee--CC---CccCCCCCCCCCC-----CccccCCCCCCe
Q psy978 61 GVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHW--HG---HHQVDSPYMDGVP-----HLTQCPVPPRST 130 (695)
Q Consensus 61 G~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~--HG---l~~~~~~~~DG~p-----~vtqcpI~PG~~ 130 (695)
|.....++|||+. .|+|+|++| ++++|+.|........+|+ +| ...... ..||.+ .+..-.|.|||+
T Consensus 166 ~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~vi-a~DG~~~~~P~~~~~l~l~pgeR 242 (448)
T 3aw5_A 166 GFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLI-AVDQGFLARPIEVRALFLAPAER 242 (448)
T ss_dssp CCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEE-EETTEEEEEEEEESCEEECTTCE
T ss_pred CccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEE-EeCCCccCCceEeceEEECCcce
Confidence 3445689999986 599999999 9999999998778899999 87 544332 479864 233456899999
Q ss_pred EEEEEEcCCCeeeEEEccccCcCCC------------C-ceeEEEEe--CCCCC-CCCCCCCCC---C---CCceEEEEe
Q psy978 131 FRYKFNADSPGTHFWHSHTGSQRGD------------G-SFGAFIIR--KPRPR-EVHAPLYDF---D---LPEHIMLIT 188 (695)
Q Consensus 131 ~tY~f~~~~~GT~wYHsH~~~q~~~------------G-l~G~lIV~--~~~~~-~p~~~~~d~---d---~~e~~l~l~ 188 (695)
++..++++ .|.||..++....... + -...++++ ..... .|. .+.+. + ..++.+.|+
T Consensus 243 ~dvlv~~~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~L~~lp~~~~~~~~~~~~~l~ 320 (448)
T 3aw5_A 243 AEVVVELG-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVE-ALSDPPPEPPKPTRTRRFALS 320 (448)
T ss_dssp EEEEEEEC-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCC-CCSCCCCCCCCCSEEEEEEEE
T ss_pred EEEEEECC-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCcc-ccCCCCCCCCCCCceEEEEEe
Confidence 99999887 5889999874321100 0 12222222 11110 010 00000 0 001111111
Q ss_pred eecccchhhhhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEE-EecCcEEEEEEEeCC-CCCccEEEEEc
Q psy978 189 DWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFT-VKQGHSYRFRIINAG-YLNCPIELSIA 266 (695)
Q Consensus 189 dw~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~-v~~G~~~rlRliNa~-~~~~~~~~~i~ 266 (695)
. ....|+|||+..... .+.+. ++.|++++|+|.|.+ ... +.||||
T Consensus 321 ~--------------------~~~~~~iNg~~~~~~-----------~p~~~~~~~g~~v~~~i~N~~~~~~--HP~HLH 367 (448)
T 3aw5_A 321 L--------------------SGMQWTINGMFWNAS-----------NPLFEHVSVEGVELWEIVNDKASMP--HPMHLH 367 (448)
T ss_dssp E--------------------ETTEEEETTBCCCTT-----------CTTCCCEEECEEEEEEEEECSSSCC--EEEEES
T ss_pred C--------------------CCceeeECCCcCCCC-----------CCceeccCCCCeEEEEEEcCCCCCC--cCEEEC
Confidence 0 012589999964311 12456 889999999999998 554 679999
Q ss_pred CcceeEecCCCCcc------------ce---eEEeEEEEcCCceEEEEEEc-----CCCCcceEEEEee
Q psy978 267 NHTLTAINSDGGDI------------KP---ISVGSIVSYAGERWDFILNA-----THHVGNYWIKMRG 315 (695)
Q Consensus 267 gh~~~Via~DG~~v------------~p---~~~d~l~l~pGeR~dVlv~a-----~~~~g~Y~Ir~~~ 315 (695)
||.|+|++.+|... .| ...|++.|.||+++.|++++ +++ |.+.++-
T Consensus 368 G~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp---w~~HCHi 433 (448)
T 3aw5_A 368 GFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL---FPFHCHN 433 (448)
T ss_dssp SSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE---EEEEESS
T ss_pred CceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc---EEEEcCC
Confidence 99999999999764 23 58999999999999999555 433 5566654
No 62
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.31 E-value=6.3e-11 Score=134.84 Aligned_cols=224 Identities=9% Similarity=0.019 Sum_probs=138.6
Q ss_pred eEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC----CccccCCCCCCeEEEEEEc-CC-CeeeEEEcccc
Q psy978 77 AVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP----HLTQCPVPPRSTFRYKFNA-DS-PGTHFWHSHTG 150 (695)
Q Consensus 77 ~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p----~vtqcpI~PG~~~tY~f~~-~~-~GT~wYHsH~~ 150 (695)
+|+|++|+++++||.|........+|++|..+... ..||.+ .+..-.|.|||+++..+++ ++ +|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi-~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV-EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE-EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE-EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 89999999999999999876778899999876543 589964 2344568999999999999 44 79999999864
Q ss_pred CcCCCCce--eEEEEeCCCC-CCCC-----CCCCCC---------------------CCCceEEEEeeecccchhhhhhc
Q psy978 151 SQRGDGSF--GAFIIRKPRP-REVH-----APLYDF---------------------DLPEHIMLITDWSHVLGVEMFNA 201 (695)
Q Consensus 151 ~q~~~Gl~--G~lIV~~~~~-~~p~-----~~~~d~---------------------d~~e~~l~l~dw~~~~~~~~~~~ 201 (695)
.--.+... +.|-...... ..|. ...++. ...+..+.+.--.
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~---------- 353 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQ---------- 353 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEE----------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEee----------
Confidence 21111222 3333322221 1110 000000 0000111110000
Q ss_pred ccCCCCCCCCCeeeeCCCCCCcc----------------------------cCCCCC----cCCCCceeEEEecCcEEEE
Q psy978 202 HHHADGDNKPPTILMNGKGRFKE----------------------------FRSNAT----VTYTPMEVFTVKQGHSYRF 249 (695)
Q Consensus 202 ~~~~~~~~~~~~~lING~~~~~~----------------------------~~~~~~----~~~~~~~~~~v~~G~~~rl 249 (695)
. .......|.|||+..... ++.... ........+.++.|++++|
T Consensus 354 --~--~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~i 429 (552)
T 1aoz_A 354 --N--VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDV 429 (552)
T ss_dssp --E--EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEE
T ss_pred --c--cCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEE
Confidence 0 000012366777632100 000000 0000013588999999999
Q ss_pred EEEeCCCC----CccEEEEEcCcceeEecCC-CCc----------cceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEe
Q psy978 250 RIINAGYL----NCPIELSIANHTLTAINSD-GGD----------IKPISVGSIVSYAGERWDFILNATHHVGNYWIKMR 314 (695)
Q Consensus 250 RliNa~~~----~~~~~~~i~gh~~~Via~D-G~~----------v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~ 314 (695)
.|.|.+.+ ...+-||||||.|.|++.. |.+ ..|...|++.|.+|+.+.|.++|+++ |.+.++.+
T Consensus 430 vi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNP-G~W~~HCH 508 (552)
T 1aoz_A 430 ILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNP-GVWAFHCH 508 (552)
T ss_dssp EEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSC-EEEEEEES
T ss_pred EEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCC-eEEEEEee
Confidence 99998743 1246799999999999983 553 35889999999999999999999976 88878876
Q ss_pred ec
Q psy978 315 GL 316 (695)
Q Consensus 315 ~~ 316 (695)
-.
T Consensus 509 i~ 510 (552)
T 1aoz_A 509 IE 510 (552)
T ss_dssp SH
T ss_pred eh
Confidence 44
No 63
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.30 E-value=4e-11 Score=133.50 Aligned_cols=240 Identities=15% Similarity=0.133 Sum_probs=148.2
Q ss_pred CceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEee-CCCccCCCCCCCCCC-----CccccCCCCCCeEEEE
Q psy978 61 GVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHW-HGHHQVDSPYMDGVP-----HLTQCPVPPRSTFRYK 134 (695)
Q Consensus 61 G~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~-HGl~~~~~~~~DG~p-----~vtqcpI~PG~~~tY~ 134 (695)
|.....++|||+. .|.+.+ +|+++++||.|........+++ +|...... ..||.+ .+++-.|.|||+++..
T Consensus 180 g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vI-a~DG~~l~~P~~~~~l~l~pGeR~dvl 256 (488)
T 3od3_A 180 GWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVI-ASDGGLLPEPVKVSELPVLMGERFEVL 256 (488)
T ss_dssp CCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEE-EETTEEEEEEEEESCEEECTTCEEEEE
T ss_pred CCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEE-EeCCCcccCccEeceEEECCCCEEEEE
Confidence 3445689999986 488876 6789999999998777888888 67654333 579853 2445669999999999
Q ss_pred EEcCCCeeeEEEccccCcCC------CCceeEEEEeC----CCCCCCCC-----CCCCC-CCCceEEEE--eeecccchh
Q psy978 135 FNADSPGTHFWHSHTGSQRG------DGSFGAFIIRK----PRPREVHA-----PLYDF-DLPEHIMLI--TDWSHVLGV 196 (695)
Q Consensus 135 f~~~~~GT~wYHsH~~~q~~------~Gl~G~lIV~~----~~~~~p~~-----~~~d~-d~~e~~l~l--~dw~~~~~~ 196 (695)
+++.+.++++.-+....... +.-.-.+-|++ ....-|.. .+-+. ....+.+.+ ..-....+.
T Consensus 257 v~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~ 336 (488)
T 3od3_A 257 VEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGM 336 (488)
T ss_dssp EEECTTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHH
T ss_pred EEeCCCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcccccCCCCcccccccceEEEEEeccccccccc
Confidence 99998888887765322110 00011222332 11111110 00010 111222222 210000000
Q ss_pred hhh----h----ccc--------CCCCCC-------CC---CeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEE
Q psy978 197 EMF----N----AHH--------HADGDN-------KP---PTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFR 250 (695)
Q Consensus 197 ~~~----~----~~~--------~~~~~~-------~~---~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlR 250 (695)
..+ . ... ...|.. .. ..|+|||+.... ..+.+.++.|+++||+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~-----------~~~~~~~~~G~~e~w~ 405 (488)
T 3od3_A 337 QMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDM-----------NKPMFAAAKGQYERWV 405 (488)
T ss_dssp HHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCT-----------TCCSEECCBSSCEEEE
T ss_pred ccccccccccccccccccccccccccCccccccccccccccceeeECCeeCCC-----------CCCceEcCCCCEEEEE
Confidence 000 0 000 000100 01 137999996431 1135899999999999
Q ss_pred EEeCCCCCccEEEEEcCcceeEecCCCCccce---eEEeEEEEcCCceEEEEEEcCCC---CcceEEEEeec
Q psy978 251 IINAGYLNCPIELSIANHTLTAINSDGGDIKP---ISVGSIVSYAGERWDFILNATHH---VGNYWIKMRGL 316 (695)
Q Consensus 251 liNa~~~~~~~~~~i~gh~~~Via~DG~~v~p---~~~d~l~l~pGeR~dVlv~a~~~---~g~Y~Ir~~~~ 316 (695)
|+|.+... .+.||||||.|+|++.||....+ .+.|+|.|. ||++.|+++++++ +|.|.+.++.+
T Consensus 406 l~N~~~~~-~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 406 ISGVGDMM-LHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp EECTTCCC-CEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSH
T ss_pred EEeCCCCC-CccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCch
Confidence 99998433 46799999999999999987754 479999999 9999999999864 36787777644
No 64
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.30 E-value=7.9e-11 Score=134.07 Aligned_cols=248 Identities=10% Similarity=0.034 Sum_probs=150.0
Q ss_pred EEEEEEcCCCC--------CCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC----CccccCCCCCCeE
Q psy978 64 RAITVVNRQLP--------GPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP----HLTQCPVPPRSTF 131 (695)
Q Consensus 64 ~~~~~iNG~~P--------GP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p----~vtqcpI~PG~~~ 131 (695)
...++|||+.. -|+|.|++|+++++||.|........+|++|..+... ..||.+ .+..-.|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi-~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVI-AADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEE-EETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEE-ecCCcccCceEeCeEEEccEEEE
Confidence 45789999873 3799999999999999999877788999999876543 579876 2344568999999
Q ss_pred EEEEEcCC-CeeeEEEccc--cC---cCCCC-ceeEEEEeCCCCCCCCCCCCC-CC---CCceEEEEeeecccc---h--
Q psy978 132 RYKFNADS-PGTHFWHSHT--GS---QRGDG-SFGAFIIRKPRPREVHAPLYD-FD---LPEHIMLITDWSHVL---G-- 195 (695)
Q Consensus 132 tY~f~~~~-~GT~wYHsH~--~~---q~~~G-l~G~lIV~~~~~~~p~~~~~d-~d---~~e~~l~l~dw~~~~---~-- 195 (695)
+..+++++ +|.||..+.. .. ..... ..+.|.........|...... .+ ..+. .+....... .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~--~l~p~~~~~~p~~~~ 351 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTL--DVRPVVPRSVPVNSF 351 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCS--CCCBSSCCBCCCTTC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCccccccc--ccccCCCCCCCCccc
Confidence 99999976 7899999875 21 01111 123333322221112111110 00 0000 000000000 0
Q ss_pred ---hhh-hhcccCCCCCCCCCeeeeCCCCCCcccCCC--------CCcCCCCceeEEEecCcEEEEEEEeCCC----CCc
Q psy978 196 ---VEM-FNAHHHADGDNKPPTILMNGKGRFKEFRSN--------ATVTYTPMEVFTVKQGHSYRFRIINAGY----LNC 259 (695)
Q Consensus 196 ---~~~-~~~~~~~~~~~~~~~~lING~~~~~~~~~~--------~~~~~~~~~~~~v~~G~~~rlRliNa~~----~~~ 259 (695)
... +.... ..+......++|||+.....+... ...-......+.++.++++++.++|... ..
T Consensus 352 ~~~~~~~~~~~~-~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~- 429 (559)
T 2q9o_A 352 VKRPDNTLPVAL-DLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSL- 429 (559)
T ss_dssp CCCGGGEEEEEE-ECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCC-
T ss_pred ccceeEEEEEEe-ecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCC-
Confidence 000 00000 001122346899998542110000 0000001236788888888877777643 22
Q ss_pred cEEEEEcCcceeEecCCC---------Cc------------cceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeecc
Q psy978 260 PIELSIANHTLTAINSDG---------GD------------IKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLM 317 (695)
Q Consensus 260 ~~~~~i~gh~~~Via~DG---------~~------------v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~~ 317 (695)
.+-||||||.|.|++.++ .. ..|...|++.|.+|+++.|.++++++ |.|.++.+-..
T Consensus 430 ~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNP-G~W~~HCHil~ 507 (559)
T 2q9o_A 430 PHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNP-GAWLFHCHIAW 507 (559)
T ss_dssp CEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSC-EEEEEEECCHH
T ss_pred CCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCC-eeEEEEecchh
Confidence 567999999999999986 22 24779999999999999999999876 88888876543
No 65
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.29 E-value=3.2e-11 Score=127.45 Aligned_cols=96 Identities=23% Similarity=0.445 Sum_probs=78.9
Q ss_pred eeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCE
Q psy978 475 VVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGF 554 (695)
Q Consensus 475 ~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~ 554 (695)
.+.++.|++|+|+|+|.+ ...||||||||.|+|+..+... .....|.++||+.|.++..
T Consensus 175 ~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~------------------~~~~~~~~~Dtv~l~Pger 233 (313)
T 3tas_A 175 DFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT------------------GPDDPSQVIDNKICGPADS 233 (313)
T ss_dssp CEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC------------------STTCCCCEESEEEECTTCE
T ss_pred ccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc------------------CCCCCCeeeeEEEeCCCcc
Confidence 478889999999999987 5689999999999998644111 1123567999999999977
Q ss_pred EEEEE---EecCceeeEEeecchhhhhcCceEEEEeccCC
Q psy978 555 TIIRF---HATNPGYWLFHCHIEFHVETGMALVFKVGEHE 591 (695)
Q Consensus 555 ~vIRF---~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~~~ 591 (695)
..++| +++|||.|+||||+++|++.|||.+|.|...+
T Consensus 234 ~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 234 FGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 273 (313)
T ss_dssp EEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred eEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCC
Confidence 65555 45799999999999999999999999997643
No 66
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.28 E-value=5.5e-12 Score=134.92 Aligned_cols=101 Identities=27% Similarity=0.492 Sum_probs=83.5
Q ss_pred EEEcCCC--CCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCC---C-----CccccCCCCCCeEEEEEE
Q psy978 67 TVVNRQL--PGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGV---P-----HLTQCPVPPRSTFRYKFN 136 (695)
Q Consensus 67 ~~iNG~~--PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~---p-----~vtqcpI~PG~~~tY~f~ 136 (695)
|+|||+. ..|.|+|++||+|+++|.|.. ...+.+|+||...... .+|. | ....+.|.||++++|.|+
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g-~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~ 274 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHG-EYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQII 274 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEES-SCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEE
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCC-ccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEE
Confidence 5799986 478999999999999999997 4899999999875432 2332 1 124467999999999999
Q ss_pred c---CCCeeeEEEccccCcCCCCceeEEEEeCCCCCC
Q psy978 137 A---DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPRE 170 (695)
Q Consensus 137 ~---~~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~ 170 (695)
+ +++|+|+||||...+...||.|.|+|.+++...
T Consensus 275 ~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~~ 311 (343)
T 3cg8_A 275 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 311 (343)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCC
T ss_pred ECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCCC
Confidence 6 689999999999999999999999999866543
No 67
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.22 E-value=2.7e-11 Score=136.58 Aligned_cols=94 Identities=20% Similarity=0.214 Sum_probs=74.7
Q ss_pred CCceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCC
Q psy978 60 DGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADS 139 (695)
Q Consensus 60 dG~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~ 139 (695)
++++..++++|++||+|.|+|++||+|+++|+|.+....+ +||+.... .|+ ++.|.||++++|.|++++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv---~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL---THGFTMGN----YGV----AMEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC---CEEEEETT----TTE----EEEECTTCEEEEEEECCS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc---eeeEEecC----CCc----ceeeCCCCeEEEEEECCC
Confidence 5678889999999999999999999999999998631111 35554432 222 247999999999999999
Q ss_pred CeeeEEEccc--c-CcCCCCceeEEEEeCC
Q psy978 140 PGTHFWHSHT--G-SQRGDGSFGAFIIRKP 166 (695)
Q Consensus 140 ~GT~wYHsH~--~-~q~~~Gl~G~lIV~~~ 166 (695)
+|+||||||. + .+ .||+|.|+|.++
T Consensus 566 pGtY~yhC~e~Cg~~H--~gM~G~IiV~p~ 593 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALH--MEMRGRMLVEPK 593 (595)
T ss_dssp CEEEEEECCSCCSTTC--TTCEEEEEEECC
T ss_pred CEEEEEECCCCCCCCc--cCCEEEEEEEcC
Confidence 9999999993 2 33 399999999875
No 68
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.13 E-value=8.5e-10 Score=124.38 Aligned_cols=223 Identities=13% Similarity=0.112 Sum_probs=141.0
Q ss_pred ceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCC-ccCCCCCCCCCC-----CccccCCCCCCeEEEEE
Q psy978 62 VKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGH-HQVDSPYMDGVP-----HLTQCPVPPRSTFRYKF 135 (695)
Q Consensus 62 ~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl-~~~~~~~~DG~p-----~vtqcpI~PG~~~tY~f 135 (695)
..-..++|||+. .|.|.|+.| ++++|+.|........+|+.|. .+... ..||.+ .+..-.|.|||+++..+
T Consensus 228 ~~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~vi-a~DG~~~~~P~~~~~l~l~pgeR~dvlv 304 (513)
T 2wsd_A 228 FCGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQI-GSDGGLLPRSVKLNSFSLAPAERYDIII 304 (513)
T ss_dssp CCCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEE-EETTEEEEEEEEESEEEECTTCEEEEEE
T ss_pred cccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEE-ccCCCcccCceEeCeEEECCeeeEEEEE
Confidence 445789999986 599999875 9999999998777789999887 44332 579943 23456689999999999
Q ss_pred EcCC-CeeeEE-Ecccc--CcCCCCc-eeEEEEeCCC-CCCCCC-----CCCCCCC-------CceEEEEeeecccchhh
Q psy978 136 NADS-PGTHFW-HSHTG--SQRGDGS-FGAFIIRKPR-PREVHA-----PLYDFDL-------PEHIMLITDWSHVLGVE 197 (695)
Q Consensus 136 ~~~~-~GT~wY-HsH~~--~q~~~Gl-~G~lIV~~~~-~~~p~~-----~~~d~d~-------~e~~l~l~dw~~~~~~~ 197 (695)
++++ +|.++. .+-.. .....+. ...+.++... ...+.. .+...+. .++.+.|...
T Consensus 305 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~------- 377 (513)
T 2wsd_A 305 DFTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT------- 377 (513)
T ss_dssp ECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE-------
T ss_pred ECCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee-------
Confidence 9876 576333 21111 0100111 2333333221 011100 0000000 0111111110
Q ss_pred hhhcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCC
Q psy978 198 MFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDG 277 (695)
Q Consensus 198 ~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG 277 (695)
... .....++|||+...+. ..+.++.|++++|+|+|.+... +.||||||.|+|++.+|
T Consensus 378 -----~~~---~g~~~~~iNg~~~~~~------------~~~~~~~g~~~~w~l~N~~~~~--HP~HlHG~~F~Vl~~~~ 435 (513)
T 2wsd_A 378 -----QDE---YGRPVLLLNNKRWHDP------------VTETPKVGTTEIWSIINPTRGT--HPIHLHLVSFRVLDRRP 435 (513)
T ss_dssp -----ECT---TSCEEEEETTBCTTSC------------CCBCCBTTCEEEEEEEECSSSC--EEEEESSCCEEEEEEEE
T ss_pred -----cCC---CCCceEeECCccCCCc------------ccEecCCCCEEEEEEEcCCCCC--cCEeEeCceEEEEEecC
Confidence 000 0112578999864311 2467899999999999998654 67999999999999875
Q ss_pred C---------------c------cceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEeec
Q psy978 278 G---------------D------IKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRGL 316 (695)
Q Consensus 278 ~---------------~------v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~~ 316 (695)
. + -++...|++.|.||+++.|++.++..+|.|.+.++-+
T Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 436 FDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp BCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred cccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 1 1 1235899999999999999999965569888887654
No 69
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.12 E-value=2.6e-09 Score=122.04 Aligned_cols=238 Identities=13% Similarity=0.088 Sum_probs=146.0
Q ss_pred ceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCC-------ccCCCCCCCCCCC-----cc------cc
Q psy978 62 VKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGH-------HQVDSPYMDGVPH-----LT------QC 123 (695)
Q Consensus 62 ~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl-------~~~~~~~~DG~p~-----vt------qc 123 (695)
.....++|||+. .|.|.|++| ++++||.|........+++.|. .+... ..||.+- ++ .-
T Consensus 252 ~~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vI-a~DG~~l~~P~~~~~~~~~~~l 328 (612)
T 2g23_A 252 FFGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQI-GSDGGLLPRPVPVDFDDTLPVL 328 (612)
T ss_dssp CCCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEE-EETTEEEEEEEEECSSSSSSSE
T ss_pred CcCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEE-EeCCeEccCCEEecccCcccEE
Confidence 345688999985 599999999 9999999998878889999765 11111 3788642 23 45
Q ss_pred CCCCCCeEEEEEEcCC-Ce-eeEEEccccCcCC----------CCceeEEEEeCCCCCCC---CCCCC------CCCCCc
Q psy978 124 PVPPRSTFRYKFNADS-PG-THFWHSHTGSQRG----------DGSFGAFIIRKPRPREV---HAPLY------DFDLPE 182 (695)
Q Consensus 124 pI~PG~~~tY~f~~~~-~G-T~wYHsH~~~q~~----------~Gl~G~lIV~~~~~~~p---~~~~~------d~d~~e 182 (695)
.|.|||+++.-+++.+ +| +++...-...... .+..=-|.|......++ ...+. ..+.++
T Consensus 329 ~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~ 408 (612)
T 2g23_A 329 SAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPH 408 (612)
T ss_dssp EECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCC
T ss_pred EECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCccccc
Confidence 6899999999999865 56 4666654321111 01111244543321111 11110 111111
Q ss_pred --eEEEEe------------eecccchhhhhhcccCC-------CCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEE
Q psy978 183 --HIMLIT------------DWSHVLGVEMFNAHHHA-------DGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTV 241 (695)
Q Consensus 183 --~~l~l~------------dw~~~~~~~~~~~~~~~-------~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v 241 (695)
..+++. -|-.............. ........++|||+...+ ...+.+
T Consensus 409 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~------------~~~~~v 476 (612)
T 2g23_A 409 GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFND------------GLGFTI 476 (612)
T ss_dssp EEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTS------------CCCEEE
T ss_pred ceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCC------------CCceEe
Confidence 223331 01100000000000000 000112357899985432 247899
Q ss_pred ecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCC------------------------cc---ceeEEeEEEEcCCc
Q psy978 242 KQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGG------------------------DI---KPISVGSIVSYAGE 294 (695)
Q Consensus 242 ~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~------------------------~v---~p~~~d~l~l~pGe 294 (695)
+.|++++|+|+|.+... +.||||||.|+|++.+|. .+ ++.+.|++.|.|||
T Consensus 477 ~~G~~v~w~l~N~~~~~--HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~ 554 (612)
T 2g23_A 477 GEGTHEQWTFLNLSPIL--HPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQ 554 (612)
T ss_dssp ETTCEEEEEEEECSSSC--EEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSE
T ss_pred cCCCEEEEEEEeCCCCC--CCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCc
Confidence 99999999999998664 679999999999986431 11 23479999999999
Q ss_pred eEEEEEEcCCCCcceEEEEeec
Q psy978 295 RWDFILNATHHVGNYWIKMRGL 316 (695)
Q Consensus 295 R~dVlv~a~~~~g~Y~Ir~~~~ 316 (695)
++.|.++|+..+|.|.+.++.+
T Consensus 555 ~~~i~~~~~~~pG~w~~HCHil 576 (612)
T 2g23_A 555 GLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EEEEEEECCSCCEEEEEEESSH
T ss_pred EEEEEEEeCCCCccEEEEeCch
Confidence 9999999995569998888654
No 70
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.11 E-value=5.2e-10 Score=126.47 Aligned_cols=232 Identities=16% Similarity=0.095 Sum_probs=140.0
Q ss_pred ceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCC-------CccCCCCCCCCCC-----CccccCCCCCC
Q psy978 62 VKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHG-------HHQVDSPYMDGVP-----HLTQCPVPPRS 129 (695)
Q Consensus 62 ~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HG-------l~~~~~~~~DG~p-----~vtqcpI~PG~ 129 (695)
.....++|||+. .|.|.|+.| ++++||.|........++++| ..+... ..||.. .+++-.|.|||
T Consensus 199 ~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vI-a~DG~~~~~P~~~~~l~l~pge 275 (534)
T 3abg_A 199 FWGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVI-ASDSGLLEHPADTSLLYISMAE 275 (534)
T ss_dssp CCCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEE-EETTEEEEEEEEESCEEECTTC
T ss_pred ccCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEE-EeCCCcccCceEeceEEECCcc
Confidence 335689999985 699999885 999999999877788999976 333222 478853 24456699999
Q ss_pred eEEEEEEcCC-Ce-eeEEEccccCcCC-------CCceeEEEEeCCCCC-CCCCCCCCCCCCceEEEEeeecccchhhhh
Q psy978 130 TFRYKFNADS-PG-THFWHSHTGSQRG-------DGSFGAFIIRKPRPR-EVHAPLYDFDLPEHIMLITDWSHVLGVEMF 199 (695)
Q Consensus 130 ~~tY~f~~~~-~G-T~wYHsH~~~q~~-------~Gl~G~lIV~~~~~~-~p~~~~~d~d~~e~~l~l~dw~~~~~~~~~ 199 (695)
+++..+++++ +| +||..+....... ....+.+-++..... .+.......++.... ..+ ........+
T Consensus 276 R~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~--~p~-~~~~~~~~~ 352 (534)
T 3abg_A 276 RYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVP--FPS-PTTNTPRQF 352 (534)
T ss_dssp EEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCS--CCC-CCCCCCEEE
T ss_pred EEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCC--CCC-CccccceEE
Confidence 9999999876 67 6887663211100 011233333221110 000000000000000 000 000000000
Q ss_pred hcccCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCceeEEEecCcEEEEEEEeCCCC-CccEEEEEcCcceeEecC-CC
Q psy978 200 NAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYL-NCPIELSIANHTLTAINS-DG 277 (695)
Q Consensus 200 ~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliNa~~~-~~~~~~~i~gh~~~Via~-DG 277 (695)
. .. .....|+|||+..... .....+.++.|++++|.|.|.+.. .| -||||||.|.|++. +|
T Consensus 353 ~--~~----~~~~~w~iNG~~f~~~---------~~p~l~~v~~G~~~~w~i~N~~~~~~H--P~HLHG~~F~Vl~~~~g 415 (534)
T 3abg_A 353 R--FG----RTGPTWTINGVAFADV---------QNRLLANVPVGTVERWELINAGNGWTH--PIHIHLVDFKVISRTSG 415 (534)
T ss_dssp E--CS----CCCSTTCCCCBTTBCT---------TSCCCCEECTTCEEEEEEEECSSSCCC--CEEESSCCEEEEEESSC
T ss_pred E--Ee----ccCceeEECCcccCCC---------CCcceeeccCCCEEEEEEEcCCCCCCc--CEEECCeeEEEEEEcCC
Confidence 0 00 0123578999864310 001245789999999999998743 44 59999999999988 66
Q ss_pred C---ccce---eEEeEEEEcCCceEEEEEE-cCCCCcceEEEEeecc
Q psy978 278 G---DIKP---ISVGSIVSYAGERWDFILN-ATHHVGNYWIKMRGLM 317 (695)
Q Consensus 278 ~---~v~p---~~~d~l~l~pGeR~dVlv~-a~~~~g~Y~Ir~~~~~ 317 (695)
. ...+ ...|++.|.||+++.|.+. ++++ |.|.++++-+.
T Consensus 416 ~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adnp-G~w~~HCHil~ 461 (534)
T 3abg_A 416 NNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFP-GVYMFHCHNLI 461 (534)
T ss_dssp CSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSCC-EEEEEEESCHH
T ss_pred CCcCcCCccccCCcCeEEcCCCCEEEEEEEECCCC-ccEEEecChHH
Confidence 3 1112 5789999999999999998 5654 88888887543
No 71
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.11 E-value=3.1e-10 Score=100.04 Aligned_cols=83 Identities=18% Similarity=0.262 Sum_probs=66.9
Q ss_pred EEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEE
Q psy978 66 ITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFW 145 (695)
Q Consensus 66 ~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wY 145 (695)
+..-+..|..+.|+|++||+|++ .|.. ..++++|+++. +||.....+..|.||++++|.| +++|+|||
T Consensus 23 V~~~~~~F~P~~i~v~~Gd~V~~--~N~d-~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf--~~~G~y~y 90 (105)
T 2ov0_A 23 VDIAKMKYETPELHVKVGDTVTW--INRE-AMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF--TEAGTYDY 90 (105)
T ss_dssp EEEETTEESSSEEEECTTCEEEE--EECS-SSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEE
T ss_pred EEEeecEEcCCEEEECCCCEEEE--EECC-CCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe--CCCEEEEE
Confidence 33356678889999999999655 6886 46899998852 4677666677899999999988 79999999
Q ss_pred EccccCcCCCCceeEEEEe
Q psy978 146 HSHTGSQRGDGSFGAFIIR 164 (695)
Q Consensus 146 HsH~~~q~~~Gl~G~lIV~ 164 (695)
||+... ||.|.|+|+
T Consensus 91 ~C~~H~----gM~G~i~V~ 105 (105)
T 2ov0_A 91 HCTPHP----FMRGKVVVE 105 (105)
T ss_dssp ECSSCT----TCEEEEEEC
T ss_pred EeCCCC----CCEEEEEEC
Confidence 998743 999999984
No 72
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.04 E-value=1.3e-08 Score=115.48 Aligned_cols=245 Identities=9% Similarity=0.028 Sum_probs=144.6
Q ss_pred EEEEEcCCCC----------------CCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC----CccccC
Q psy978 65 AITVVNRQLP----------------GPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP----HLTQCP 124 (695)
Q Consensus 65 ~~~~iNG~~P----------------GP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p----~vtqcp 124 (695)
..++|||+.. .++|.|++|+++++|++|........+|++|+.+... ..||.+ .+..-.
T Consensus 226 d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VI-a~DG~~v~P~~~~~l~ 304 (580)
T 3sqr_A 226 ENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVI-ANDLVPIVPYTTDTLL 304 (580)
T ss_dssp SEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEE-EETTEEEEEEEESSEE
T ss_pred ceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEE-EeCCccCCceEeeEEE
Confidence 4678999742 3799999999999999999876778999999886554 579976 233346
Q ss_pred CCCCCeEEEEEEcCC-CeeeEEEccccCc--C-CC-CceeEEEEeCC-CCCCCCCCCCCCCCCceEEEEee--ecccchh
Q psy978 125 VPPRSTFRYKFNADS-PGTHFWHSHTGSQ--R-GD-GSFGAFIIRKP-RPREVHAPLYDFDLPEHIMLITD--WSHVLGV 196 (695)
Q Consensus 125 I~PG~~~tY~f~~~~-~GT~wYHsH~~~q--~-~~-Gl~G~lIV~~~-~~~~p~~~~~d~d~~e~~l~l~d--w~~~~~~ 196 (695)
|.|||+++..+++++ +|.||..+..... . .. +..-+++.+.. ....|....++... .. +.+ .......
T Consensus 305 i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~--~~--~~~~~~~L~P~~ 380 (580)
T 3sqr_A 305 IGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRG--TC--EDEPVASLVPHL 380 (580)
T ss_dssp ECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCC--CS--CCSCGGGCCBSS
T ss_pred EccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccc--hh--hcccccccccCC
Confidence 899999999999975 6999999875321 0 11 11123333322 11222221111110 00 000 0000000
Q ss_pred hh-hh-----cccCCCCCCCCCeeeeCCCCCCcccCCC-------CCcCCCC-ceeEEE----ecCcEEEEEEEeCCCCC
Q psy978 197 EM-FN-----AHHHADGDNKPPTILMNGKGRFKEFRSN-------ATVTYTP-MEVFTV----KQGHSYRFRIINAGYLN 258 (695)
Q Consensus 197 ~~-~~-----~~~~~~~~~~~~~~lING~~~~~~~~~~-------~~~~~~~-~~~~~v----~~G~~~rlRliNa~~~~ 258 (695)
.. .. ......+......|.|||......+... ......+ ...+.+ +.|+++.|.|.|.+...
T Consensus 381 ~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~ 460 (580)
T 3sqr_A 381 ALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG 460 (580)
T ss_dssp CCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC
T ss_pred CCCCCCccceEEEEEeccCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc
Confidence 00 00 0000000111234678887432100000 0000000 123444 35999999999987222
Q ss_pred ccEEEEEcCcceeEecCC-CC-----------ccceeEEeEEEEcCCceEEEEEEcCCCCcceEEEEee
Q psy978 259 CPIELSIANHTLTAINSD-GG-----------DIKPISVGSIVSYAGERWDFILNATHHVGNYWIKMRG 315 (695)
Q Consensus 259 ~~~~~~i~gh~~~Via~D-G~-----------~v~p~~~d~l~l~pGeR~dVlv~a~~~~g~Y~Ir~~~ 315 (695)
..+.||+|||.|.||+.+ |. +..|...|++.+.||+.+.|.++++++ |.+.++.+-
T Consensus 461 ~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNP-G~W~~HCHi 528 (580)
T 3sqr_A 461 IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNP-GSWLLHCHI 528 (580)
T ss_dssp CCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSC-EEEEEEECS
T ss_pred cceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCC-eeeEEEECc
Confidence 256799999999999884 22 235889999999999999999999976 877777753
No 73
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.94 E-value=1.1e-09 Score=96.18 Aligned_cols=86 Identities=16% Similarity=0.161 Sum_probs=66.2
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
...+.++.|++|+| .|.+ ...|++|+||..|... .|. +..+ ...++..|++|
T Consensus 18 p~~i~v~~Gd~V~~--~N~~---~~~H~v~~~~~~~~~~----~g~----------~~~~---------~~~~~~~i~pG 69 (105)
T 3cvb_A 18 PANVTVHPGDTVKW--VNNK---LPPHNILFDDKQVPGA----SKE----------LADK---------LSHSQLMFSPG 69 (105)
T ss_dssp SSEEEECTTEEEEE--EECS---SCCEEEEECTTSSGGG----CHH----------HHHH---------HCEEEEECSTT
T ss_pred CCEEEEcCCCEEEE--EECC---CCCCeEEEeCCCCCcc----ccc----------cccc---------ccccccccCCC
Confidence 34689999999876 4765 4689999999876431 010 0000 12578899999
Q ss_pred CEEEEEEEe-cCceeeEEeecchhhhhcCceEEEEec
Q psy978 553 GFTIIRFHA-TNPGYWLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 553 G~~vIRF~A-dNPG~Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
....++|.+ +.||.|.|||| .|...||...|.|.
T Consensus 70 ~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 70 ESYEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp CEEEEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CeEEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 999999999 79999999999 79999999999985
No 74
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=98.91 E-value=1.2e-09 Score=113.87 Aligned_cols=141 Identities=19% Similarity=0.278 Sum_probs=93.4
Q ss_pred eeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCE
Q psy978 475 VVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGF 554 (695)
Q Consensus 475 ~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~ 554 (695)
++.++.|+.|+|.+.|.. ...|++|+||... ... .| .+..+...|+||+.
T Consensus 67 ~i~~~~Gd~v~v~~~N~~---~~~~~iH~HG~~~-----~~~--------------DG--------~p~~~~~~i~PG~~ 116 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNAG---AHPHTIHFHGVHR-----ATM--------------DG--------TPGIGAGSIAPGQS 116 (288)
T ss_dssp EEEEETTCEEEEEEEECS---SSCBCCEESSCCC-----GGG--------------SC--------CTTSTTCSBCTTCE
T ss_pred cEEEeCCCEEEEEEEeCC---CCcccEEeccccc-----ccc--------------CC--------CCCccceeECCCCE
Confidence 589999999999999986 5789999999752 110 01 01224466899999
Q ss_pred EEEEEEecCceeeEEeecch---hhhhcCceEEEEeccCCCCCCCCCCCC-CCCCCCCCCCCCccccccccccceeeeee
Q psy978 555 TIIRFHATNPGYWLFHCHIE---FHVETGMALVFKVGEHEDMAPVPKDFP-TCGDYYNVDSVEDEDNEIGEIGEKKEVTT 630 (695)
Q Consensus 555 ~vIRF~AdNPG~Wl~HCHi~---~H~~~GM~~v~~V~~~~~~~~~P~~~p-~Cg~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (695)
...+|.+++||.|.||||.. .|...||+..|.|.+....++.-.++. .-..|.... +. .....++
T Consensus 117 ~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~~~d~e~~l~~~d~~~~~---------g~--~~~~~~i 185 (288)
T 3gdc_A 117 FTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRPPADDEMVMVMNGYNTDG---------GD--DNEFYSV 185 (288)
T ss_dssp EEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCCCCSEEEEEEEEEECCSS---------TT--CCSEEEE
T ss_pred EEEEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCCCCcceEEEEEeeEecCC---------CC--CcceEEE
Confidence 99999999999999999997 799999999999976533322111111 111121110 01 1234567
Q ss_pred ecccccceeeccccccccceeecccc
Q psy978 631 QGSVAGDEIIPGSDDLDKKVQYEVMP 656 (695)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (695)
||.+-+....+..++.|++|.+..+-
T Consensus 186 NG~~~~~~~~~l~v~~Ge~vr~~l~N 211 (288)
T 3gdc_A 186 NGLPFHFMDFPVKVKQHELVRIHLIN 211 (288)
T ss_dssp TTSTTHHHHSCEEEETTCCEEEEEEE
T ss_pred CcccccccCcccccCCCCEEEEEEEe
Confidence 78654433344567788877776654
No 75
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.90 E-value=3.2e-09 Score=98.41 Aligned_cols=100 Identities=15% Similarity=0.140 Sum_probs=70.8
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCC-CCceeecCCCeEEEEEcccCccccccchhccccccc-ccCCC--CCCCccceeEe
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDA-NHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGL-IRRNL--KDAPLKDTVTV 549 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~-~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~-~~~n~--~~P~~rDTv~V 549 (695)
..+.++.|++|+|+|.|.+ .. .|.||+|+..+.+.. .. + .+.. ..+. ..+.. ....++||..|
T Consensus 35 ~~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~-~~----~--~~~~---~~g~~~~~~p~~~~~~~~~t~~l 101 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAA-NI----A--NAGL---SAGPAANYLPADKSNIIAESPLA 101 (139)
T ss_dssp SEEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHH-HH----H--HHHH---HHCGGGTTCCSCCTTEEEECCCB
T ss_pred CeEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccch-hh----h--hhhh---cccccccccCccccccccccccc
Confidence 3588999999999999987 45 799999986531100 00 0 0000 0000 00000 12347899999
Q ss_pred CCCCEEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 550 PDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 550 p~~G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
.+|....|.|.+++||.|.||||+..|.. ||...|.|
T Consensus 102 ~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 102 NGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp CTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred CCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 99999999999999999999999999999 99999987
No 76
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.89 E-value=4.7e-09 Score=110.05 Aligned_cols=102 Identities=20% Similarity=0.337 Sum_probs=79.6
Q ss_pred EEEcCCCC--CCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC-------CccccCCCCCCeEEEEEEc
Q psy978 67 TVVNRQLP--GPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP-------HLTQCPVPPRSTFRYKFNA 137 (695)
Q Consensus 67 ~~iNG~~P--GP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p-------~vtqcpI~PG~~~tY~f~~ 137 (695)
|.+||+.- -|.|+++.||+|+++|.|.. ....++|+||...... ..+|.. ...-..|.||+++++.+.+
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~-~~~HpfHlHGh~F~v~-~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via 256 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHG-SNFHTFHLHGHRWLDN-RTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIA 256 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEES-SCCCEEEETTCCEESS-SSSSCCSTTCCCCEESEEECCTTCEEEEEEET
T ss_pred eeecCccccccccceecCCCEEEEEEEecc-ccceeeeEecceEEEE-ecccccCCcCCCCceeeEEeCCceeEEEEEEE
Confidence 46888753 47899999999999999997 5789999999775322 122211 1222358999999999876
Q ss_pred ---CCCeeeEEEccccCcCCCCceeEEEEeCCCCCC
Q psy978 138 ---DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPRE 170 (695)
Q Consensus 138 ---~~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~~~ 170 (695)
+.+|+|+||||...+...||.|.|.|++++..-
T Consensus 257 ~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~~~ 292 (299)
T 3t9w_A 257 GEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADGTM 292 (299)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCC
T ss_pred eeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCCCC
Confidence 468999999999999999999999999876543
No 77
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.89 E-value=3.1e-09 Score=93.51 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=61.9
Q ss_pred CCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC----CccccCCCCCCeEEEEEEc-CCCeeeEEEccc
Q psy978 75 GPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP----HLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHT 149 (695)
Q Consensus 75 GP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p----~vtqcpI~PG~~~tY~f~~-~~~GT~wYHsH~ 149 (695)
.+.|+|++||+|++ .|.. ..++++|+|+..... .+|.. ..+.-.|.||++++|.|++ +++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~-~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNK-VPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECS-SSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-
T ss_pred CCEEEECCCCEEEE--EECC-CCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-
Confidence 38999999999755 5875 467888888764321 12320 0122358999999999998 79999999999
Q ss_pred cCcCCCCceeEEEEe
Q psy978 150 GSQRGDGSFGAFIIR 164 (695)
Q Consensus 150 ~~q~~~Gl~G~lIV~ 164 (695)
.|...||.|.|+|.
T Consensus 92 -~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 92 -PHRGAGMVGKITVA 105 (106)
T ss_dssp -TTGGGTCEEEEEEC
T ss_pred -ChhhcCcEEEEEEc
Confidence 67777999999996
No 78
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.82 E-value=2.2e-08 Score=92.75 Aligned_cols=91 Identities=12% Similarity=0.154 Sum_probs=67.1
Q ss_pred CCCCCeEEEEeCCEEEEEEeeCCCCC-CceEeeCCCccC-----------C---CCCC-CCCCC--ccccCCCCCCeEEE
Q psy978 72 QLPGPAVDVCVGDHVIVNLHNGLMEE-STSIHWHGHHQV-----------D---SPYM-DGVPH--LTQCPVPPRSTFRY 133 (695)
Q Consensus 72 ~~PGP~I~v~~GD~v~V~v~N~l~~~-~~siH~HGl~~~-----------~---~~~~-DG~p~--vtqcpI~PG~~~tY 133 (695)
+|--+.|+|++||+|+++++|.. .. +++++.|+.... . ..+. ++.+. ...--|.||+++++
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~-~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNS-AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCC-SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCC-CCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEE
Confidence 45558999999999999999985 35 788888874310 0 0000 01010 01123899999999
Q ss_pred EEEcCCCeeeEEEccccCcCCCCceeEEEEe
Q psy978 134 KFNADSPGTHFWHSHTGSQRGDGSFGAFIIR 164 (695)
Q Consensus 134 ~f~~~~~GT~wYHsH~~~q~~~Gl~G~lIV~ 164 (695)
.|+++++|+|+||||...+.. ||.|.|+|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999988888 999999984
No 79
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.76 E-value=2.5e-07 Score=106.59 Aligned_cols=238 Identities=15% Similarity=0.121 Sum_probs=134.1
Q ss_pred CceEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCc---------cCCCCCCCCCC-----------Cc
Q psy978 61 GVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHH---------QVDSPYMDGVP-----------HL 120 (695)
Q Consensus 61 G~~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~---------~~~~~~~DG~p-----------~v 120 (695)
|.....+++||+. -|.+.|. |.++++||+|........+.+-|.. +. ..||.. .+
T Consensus 251 ~~~gd~~~vNG~~-~p~~~v~-~~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vI---a~DG~~l~~Pv~v~~p~~~ 325 (612)
T 3gyr_A 251 PFFGPYTTVNGRI-WPYADVD-DGWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQI---GSDGGLLPRPVPVDFDDTL 325 (612)
T ss_dssp CCCCSEEEETTEE-SCEEEEE-SSEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEE---EETTEEEEEEEEECSSSSS
T ss_pred CccCceeeecCCc-cceEecc-CcEEEEEEEeccCCcceeEEEccCCCccCCceEEEE---EeCCCccccceeccCcccc
Confidence 3445678999986 5999986 5589999999987677777774432 22 368832 12
Q ss_pred cccCCCCCCeEEEEEEcCC-CeeeEEEccccCcCCC-------C--ceeE--EEEeCCCCCCCCCC---------CCCCC
Q psy978 121 TQCPVPPRSTFRYKFNADS-PGTHFWHSHTGSQRGD-------G--SFGA--FIIRKPRPREVHAP---------LYDFD 179 (695)
Q Consensus 121 tqcpI~PG~~~tY~f~~~~-~GT~wYHsH~~~q~~~-------G--l~G~--lIV~~~~~~~p~~~---------~~d~d 179 (695)
+.-.|.|||+++.-+++++ .|.+|+-......... + .... +.+......+.... ....+
T Consensus 326 ~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 405 (612)
T 3gyr_A 326 PVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHD 405 (612)
T ss_dssp SSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTT
T ss_pred cEEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccc
Confidence 3456899999999998876 4554443322111100 0 0111 12222111111000 00011
Q ss_pred CC--ceEEEEeeecccchh---hhhh--cc--------------cCCCCCCCCCeeeeCCCCCCcccCCCCCcCCCCcee
Q psy978 180 LP--EHIMLITDWSHVLGV---EMFN--AH--------------HHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEV 238 (695)
Q Consensus 180 ~~--e~~l~l~dw~~~~~~---~~~~--~~--------------~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~ 238 (695)
.+ ...+.+..-...... ..+. .. ...........+.+||+...+ ...
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~------------~~~ 473 (612)
T 3gyr_A 406 IPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFND------------GLG 473 (612)
T ss_dssp SCCEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTTS------------CCC
T ss_pred cccccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccCCC------------Ccc
Confidence 10 111111100000000 0000 00 000011122345566653321 146
Q ss_pred EEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCcc---------------------------ceeEEeEEEEc
Q psy978 239 FTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDI---------------------------KPISVGSIVSY 291 (695)
Q Consensus 239 ~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v---------------------------~p~~~d~l~l~ 291 (695)
+.++.|++++|.|+|.+... +-||||||.|+|++.+|... ++...|+|.|.
T Consensus 474 ~~~~~g~~~~w~i~N~~~~~--HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~ 551 (612)
T 3gyr_A 474 FTIGEGTHEQWTFLNLSPIL--HPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVP 551 (612)
T ss_dssp EEEETTCEEEEEEEECSSSC--EEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEEC
T ss_pred eEeCCCCEEEEEEEcCCCCC--cCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEEC
Confidence 88999999999999999775 56999999999998765321 23358999999
Q ss_pred CCceEEEEEEcCCCCcceEEEEeecc
Q psy978 292 AGERWDFILNATHHVGNYWIKMRGLM 317 (695)
Q Consensus 292 pGeR~dVlv~a~~~~g~Y~Ir~~~~~ 317 (695)
+|+.+.|.+++...+|.|.+.++-+.
T Consensus 552 ~~~~v~i~~rfadnpG~w~~HCHil~ 577 (612)
T 3gyr_A 552 GPQGLRVMGKFDGAYGRFMYHCHLLE 577 (612)
T ss_dssp SSEEEEEEEECCSCCEEEEEEESSHH
T ss_pred CCCEEEEEEEeCCCCcceEEcCCChH
Confidence 99999999996555698888887543
No 80
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.64 E-value=5.5e-08 Score=84.64 Aligned_cols=85 Identities=11% Similarity=0.061 Sum_probs=66.0
Q ss_pred EEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeee
Q psy978 64 RAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTH 143 (695)
Q Consensus 64 ~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~ 143 (695)
-.+-.-|..|-...|+|++||+|++.++|.. ...+++...+.... -.+.||++.+|.|+++++|+|
T Consensus 16 v~V~~~~~~F~P~~i~v~~G~tV~~~~~n~d-~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 16 IEVELNDDYFNPNVITIPINESTTLLLKNKG-KSEHTFTIKKLGID-------------VVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEEEETTEEESSEEEECTTSCEEEEEEECS-SSCEEEEEGGGTEE-------------EEECTTCEEEEEECCCSCEEE
T ss_pred EEEEEECCEEeCCEEEECCCCEEEEEEEcCC-CceEEEEEecCCcc-------------eeecCCcceeEEEecccCceE
Confidence 3344446667557999999999999999986 35566666554321 137899999999999999999
Q ss_pred EEEccccCcCCCCceeEEEEe
Q psy978 144 FWHSHTGSQRGDGSFGAFIIR 164 (695)
Q Consensus 144 wYHsH~~~q~~~Gl~G~lIV~ 164 (695)
.|+|. .+...||.|.|||+
T Consensus 82 ~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEECc--cccCCCCEEEEEEC
Confidence 99996 45667999999995
No 81
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.59 E-value=1.4e-07 Score=82.85 Aligned_cols=86 Identities=20% Similarity=0.234 Sum_probs=63.8
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
...+.++.|++|+|+ |.+ ...|+||+|+..+.. ..|. +.. ...+|++.+.+|
T Consensus 19 P~~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~----~~g~----------~~~---------~~~~~~~~~~pG 70 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA----KSAD----------LAK---------SLSHKQLLMSPG 70 (106)
T ss_dssp SSEEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT----CCHH----------HHH---------HHCBCSCCCSTT
T ss_pred CCEEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc----cccc----------cch---------hccccceeeCCC
Confidence 346899999999886 665 457999999865421 0010 000 002467778899
Q ss_pred CEEEEEEEe-cCceeeEEeecchhhhhcCceEEEEec
Q psy978 553 GFTIIRFHA-TNPGYWLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 553 G~~vIRF~A-dNPG~Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
....++|.+ +.||.|.|||| .|.+.||...|.|.
T Consensus 71 ~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 71 QSTSTTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CEEEEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 888899988 89999999999 89999999999985
No 82
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.58 E-value=4.1e-07 Score=84.17 Aligned_cols=93 Identities=12% Similarity=0.084 Sum_probs=67.0
Q ss_pred CCCCCeEEEEeCCEEEEEEee--CCCCCCceEeeCCCc------------c----CCCCCCCCCCC-ccccCCCCCCeEE
Q psy978 72 QLPGPAVDVCVGDHVIVNLHN--GLMEESTSIHWHGHH------------Q----VDSPYMDGVPH-LTQCPVPPRSTFR 132 (695)
Q Consensus 72 ~~PGP~I~v~~GD~v~V~v~N--~l~~~~~siH~HGl~------------~----~~~~~~DG~p~-vtqcpI~PG~~~t 132 (695)
+|-.+.|+|++||+|+++++| .. ...++++.++.. . ...+..|.... ...-.|.||++.+
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~-~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~ 107 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNL-GVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGS 107 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSS-CCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCC-CCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeE
Confidence 555589999999999999999 54 467777776321 0 00000011000 0012489999999
Q ss_pred EEEEcCCCeeeEEEccccCcCCCCceeEEEEeC
Q psy978 133 YKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRK 165 (695)
Q Consensus 133 Y~f~~~~~GT~wYHsH~~~q~~~Gl~G~lIV~~ 165 (695)
+.|+++.+|+|||||+...+...||.|.|+|.+
T Consensus 108 ~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 108 VTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 999999999999999998888889999999963
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.56 E-value=6.6e-08 Score=83.62 Aligned_cols=80 Identities=15% Similarity=0.251 Sum_probs=58.0
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCC-CCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcCC
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDG-VPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRG 154 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG-~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~ 154 (695)
+.|+|++||+|+ +.|.. ..++++|+|+...+.. .|. ....+.-.+.||+++++.|. ++|+|+|||+ .+..
T Consensus 18 ~~i~v~~G~~V~--~~n~~-~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~--~~G~y~y~C~--~H~~ 88 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNA-GFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT--AAGEYGYYCE--PHQG 88 (98)
T ss_dssp SEEEECTTCEEE--EEECS-SCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC--SCEEEEEECG--GGGG
T ss_pred CEEEECCCCEEE--EEECC-CCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC--CCeEEEEEcC--Cccc
Confidence 789999999876 47885 4689999998643210 110 00011235899999999885 8999999999 5666
Q ss_pred CCceeEEEEe
Q psy978 155 DGSFGAFIIR 164 (695)
Q Consensus 155 ~Gl~G~lIV~ 164 (695)
.||.|.|+|.
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 2plt_A 89 AGMVGKIIVQ 98 (98)
T ss_dssp GTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 7999999984
No 84
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.51 E-value=2e-07 Score=79.32 Aligned_cols=74 Identities=22% Similarity=0.389 Sum_probs=55.7
Q ss_pred CCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcCC
Q psy978 75 GPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRG 154 (695)
Q Consensus 75 GP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~ 154 (695)
.+.|+|++||+|++ .|.. ..+++++.++.. ++. .....+.||+++++.| +++|+|||||+ .+..
T Consensus 18 P~~i~v~~Gd~V~~--~n~~-~~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f--~~~G~y~~~C~--~H~~ 81 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNK-LAPHNVVVEGQP----ELS-----HKDLAFSPGETFEATF--SEPGTYTYYCE--PHRG 81 (91)
T ss_dssp SSEEEECTTCEEEE--EECS-SCCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEE--EECC-CCCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe--CCCEEEEEEeC--CCcc
Confidence 47899999999765 4764 367889888721 010 1223589999999887 78999999999 4555
Q ss_pred CCceeEEEEe
Q psy978 155 DGSFGAFIIR 164 (695)
Q Consensus 155 ~Gl~G~lIV~ 164 (695)
.||.|.|+|.
T Consensus 82 ~gM~g~i~V~ 91 (91)
T 1bxv_A 82 AGMVGKIVVQ 91 (91)
T ss_dssp GTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 6999999984
No 85
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.50 E-value=2.7e-07 Score=79.71 Aligned_cols=81 Identities=17% Similarity=0.262 Sum_probs=57.7
Q ss_pred CCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcCC
Q psy978 75 GPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRG 154 (695)
Q Consensus 75 GP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~ 154 (695)
.+.|+|++||+|++ .|.. ..++++|.++...++. .+++.. .+...+.||+++++.| +++|+|+|||+ .+..
T Consensus 18 P~~i~v~~G~~V~~--~n~~-~~~H~~~~~~~~~pg~-~~~~~~-~~~~~~~pG~~~~~tf--~~~G~y~~~C~--~H~~ 88 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNK-LSPHNIVFDADGVPAD-TAAKLS-HKGLLFAAGESFTSTF--TEPGTYTYYCE--PHRG 88 (98)
T ss_dssp SSEEEECTTCEEEE--EECS-SCCEEEEECCSSSCHH-HHHHHC-EEEEECSTTCEEEEEC--CSCEEEEEECG--GGTT
T ss_pred CCEEEECCCCEEEE--EECC-CCCcEEEEeCCCCCcc-cccccc-ccccccCCCCEEEEEc--CCCeEEEEEcC--Cccc
Confidence 37899999999765 4764 3678999887532100 000000 1223589999999988 68999999999 5677
Q ss_pred CCceeEEEEe
Q psy978 155 DGSFGAFIIR 164 (695)
Q Consensus 155 ~Gl~G~lIV~ 164 (695)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 1pcs_A 89 AGMVGKVVVE 98 (98)
T ss_dssp TTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 8999999984
No 86
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.50 E-value=3.8e-07 Score=82.36 Aligned_cols=74 Identities=15% Similarity=0.127 Sum_probs=53.8
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcCCC
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGD 155 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~~ 155 (695)
..|+|++||+|++.+.|. ++++..+.. .+-+|... .-+.||++++|.| +.+|+|||+|- .+...
T Consensus 21 ~~i~V~~GdtV~f~~~~~----~H~v~~~~~-----~~P~g~~~---f~~~pg~t~s~TF--~~pG~y~y~C~--~H~~~ 84 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK----SHNVEAIKE-----ILPEGVES---FKSKINESYTLTV--TEPGLYGVKCT--PHFGM 84 (123)
T ss_dssp SEEEECTTEEEEEEESST----TCCCEECTT-----SSCTTCCC---CBCCTTCCEEEEE--CSCEEEEEECG--GGTTT
T ss_pred CEEEECCCCEEEEEECCC----CceEEEcCC-----cCCCCccc---eecCCCCEEEEEe--CCCeEEEEEeC--CCCcC
Confidence 799999999988877762 233333321 12234322 2367999999988 68999999998 56778
Q ss_pred CceeEEEEeC
Q psy978 156 GSFGAFIIRK 165 (695)
Q Consensus 156 Gl~G~lIV~~ 165 (695)
||.|.|+|.+
T Consensus 85 GM~G~I~V~~ 94 (123)
T 3erx_A 85 GMVGLVQVGD 94 (123)
T ss_dssp TCEEEEEESS
T ss_pred CcEEEEEECC
Confidence 9999999986
No 87
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.43 E-value=3.6e-07 Score=82.92 Aligned_cols=76 Identities=14% Similarity=0.236 Sum_probs=53.3
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcCCC
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGD 155 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~~ 155 (695)
+.|+|++||+|++.+.|. ++++..+.-. +-+|... .-+.||++++|.| +.+|+|||||. .+...
T Consensus 23 ~~i~V~~GDtVtf~n~~~----~H~v~~~~~~-----~P~g~~~---f~s~pGet~s~TF--~~pG~y~y~C~--~H~~~ 86 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK----GHNSALMKGG-----APEGAET---WKGKINEEITVTL--SKPGVYMYQCA--PHVGM 86 (127)
T ss_dssp SEEEECTTCEEEEECSSS----SCCCEECTTC-----SCTTCCC---CBCCTTCCCEEEC--CSCEEEEEECT--TTGGG
T ss_pred CEEEECCCCEEEEEECCC----CceEEEccCc-----CCCCccc---eecCCCCEEEEEe--CCCeEEEEEeC--CCCcC
Confidence 799999999977666553 3444333211 1233221 2357999988888 78999999998 45667
Q ss_pred CceeEEEEeCCC
Q psy978 156 GSFGAFIIRKPR 167 (695)
Q Consensus 156 Gl~G~lIV~~~~ 167 (695)
||.|.|+|.++.
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999998754
No 88
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.42 E-value=4.8e-07 Score=83.68 Aligned_cols=104 Identities=20% Similarity=0.285 Sum_probs=69.6
Q ss_pred eeeeCCCCEEEEEEEeCCCCCCCCCceeecCCC--eEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 475 VVNVPLESVVELIIIDEGVAYDANHPFHLHGHP--FRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 475 ~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~--F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
.+.++.|++|.|++.|.+. ....|.||++... |.-+. . .+. ....+. +..+..-....+++|..|.+|
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~-~-~~~------~~~~~~-~~~~~~~~~~~~~~t~~l~pG 103 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAV-N-TAA------QNNADA-LFVPPPDTPNALAWTAMLNAG 103 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHH-H-HHH------HTCGGG-TTCCCTTCTTEEEECCCBCTT
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhh-h-hhh------hhcccc-cccCccccccccccceeeCCC
Confidence 5889999999999999321 1568999998531 21000 0 000 000000 000000001236789999999
Q ss_pred CEEEEEEEecCceeeEEeecchhhhhcCceEEEEec
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
....+.|.++.||.|.|||++..|...||...+.|.
T Consensus 104 ~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 104 ESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999999885
No 89
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.42 E-value=4e-07 Score=78.49 Aligned_cols=77 Identities=19% Similarity=0.362 Sum_probs=55.8
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCC--ccccCCCCCCeEEEEEEcCCCeeeEEEccccCcC
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPH--LTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQR 153 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~--vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~ 153 (695)
+.|+|++||+| ++.|.. ..+++++.++... .+|... ...-.+.||+++++.| +++|+|+|||+ .+.
T Consensus 19 ~~i~v~~G~~V--~~~n~~-~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNK-VGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL--GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECS-SCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC--CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECC-CCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe--CCCeEEEEEcc--Chh
Confidence 78999999996 455764 3567777776432 122111 1122488999999988 79999999999 666
Q ss_pred CCCceeEEEEe
Q psy978 154 GDGSFGAFIIR 164 (695)
Q Consensus 154 ~~Gl~G~lIV~ 164 (695)
..||.|.|+|.
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 67999999984
No 90
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.37 E-value=6.5e-07 Score=77.90 Aligned_cols=83 Identities=13% Similarity=0.173 Sum_probs=55.4
Q ss_pred CCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCC-C-CCCCCCCCc--cccCCCCCCeEEEEEEcCCCeeeEEEcccc
Q psy978 75 GPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVD-S-PYMDGVPHL--TQCPVPPRSTFRYKFNADSPGTHFWHSHTG 150 (695)
Q Consensus 75 GP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~-~-~~~DG~p~v--tqcpI~PG~~~tY~f~~~~~GT~wYHsH~~ 150 (695)
.+.|+|++||+|+ +.|.. ..+++++++.-.... . ..++..+.+ +.-.+.||+++++.| +++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~-~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C~-- 88 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVG-ETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV--STPGTYTFYCT-- 88 (102)
T ss_dssp SSEEEECTTCCEE--EEECS-SSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CSCEEEEEECS--
T ss_pred CCEEEECCCCEEE--EEECC-CCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe--CCCeEEEEEeC--
Confidence 3789999999976 45774 356777776210000 0 000000111 222478999999987 79999999999
Q ss_pred CcCCCCceeEEEEe
Q psy978 151 SQRGDGSFGAFIIR 164 (695)
Q Consensus 151 ~q~~~Gl~G~lIV~ 164 (695)
.+...||.|.|+|+
T Consensus 89 ~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 89 PHKSANMKGTLTVK 102 (102)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CCcccCCeEEEEEC
Confidence 66777999999984
No 91
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.35 E-value=1.6e-06 Score=78.14 Aligned_cols=75 Identities=17% Similarity=0.119 Sum_probs=53.8
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcCCC
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGD 155 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~~ 155 (695)
..|+|++||+|++. |.. .++++..+... +-+|... .-+.||++++|.| +.+|+|||||- .+...
T Consensus 22 ~~i~V~~GDTV~f~--n~~--~~Hnv~~~~~~-----~p~g~~~---~~~~pg~t~s~TF--~~~G~y~Y~C~--~H~~~ 85 (124)
T 3ef4_A 22 GFVKVEAGDTVKFV--PTD--KSHNAESVREV-----WPEGVAP---VKGGFSKEVVFNA--EKEGLYVLKCA--PHYGM 85 (124)
T ss_dssp SEEEECTTCEEEEE--CSS--SSCCCEECTTT-----SCTTSCC---CBCCTTCCEEEEC--CSSEEEEEECT--TTGGG
T ss_pred CEEEECCCCEEEEE--ECC--CCccEEEeCCc-----CCCCccc---cccCCCCEEEEEe--CCCeEEEEEcC--CCCcC
Confidence 79999999996554 552 35566555221 1233322 2367999988888 68999999995 66777
Q ss_pred CceeEEEEeCC
Q psy978 156 GSFGAFIIRKP 166 (695)
Q Consensus 156 Gl~G~lIV~~~ 166 (695)
||.|.|+|.+|
T Consensus 86 GM~G~I~V~~p 96 (124)
T 3ef4_A 86 GMVVLVQVGKP 96 (124)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 99999999874
No 92
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.35 E-value=1.4e-06 Score=75.25 Aligned_cols=77 Identities=13% Similarity=0.225 Sum_probs=56.6
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCC------ccccCCCCCCeEEEEEEcCCCeeeEEEccc
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPH------LTQCPVPPRSTFRYKFNADSPGTHFWHSHT 149 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~------vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~ 149 (695)
+.|+|++||+|+ +.|.. ..++++|+++... .+|... ...-.+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~-~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~--~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKIT--FKNNA-GFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT--EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEEE--EEECS-SCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC--SCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECC-CCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC--CCcEEEEEcC-
Confidence 689999999864 57885 4678888887432 122210 11124789999999884 8999999999
Q ss_pred cCcCCCCceeEEEEe
Q psy978 150 GSQRGDGSFGAFIIR 164 (695)
Q Consensus 150 ~~q~~~Gl~G~lIV~ 164 (695)
.+...||.|.|+|.
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 56777999999984
No 93
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.34 E-value=1.6e-06 Score=75.01 Aligned_cols=77 Identities=14% Similarity=0.252 Sum_probs=55.9
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCC------ccccCCCCCCeEEEEEEcCCCeeeEEEccc
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPH------LTQCPVPPRSTFRYKFNADSPGTHFWHSHT 149 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~------vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~ 149 (695)
+.|+|++||+|++ .|.. ..+++++.++.... +|... .+.-.+.||+++++.| +++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~~--~n~~-~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf--~~~G~y~~~C~- 85 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNA-GFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL--SNKGEYSFYCS- 85 (99)
T ss_dssp SEEEECTTCEEEE--EECS-SCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC--CSCEEEEEECG-
T ss_pred CEEEECCCCEEEE--EECC-CCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE--CCCceEEEEcC-
Confidence 7899999998654 7875 45788887764321 22110 0112478999999887 49999999999
Q ss_pred cCcCCCCceeEEEEe
Q psy978 150 GSQRGDGSFGAFIIR 164 (695)
Q Consensus 150 ~~q~~~Gl~G~lIV~ 164 (695)
.+...||.|.|+|.
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 -PHQGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CCcccCCEEEEEEC
Confidence 56777999999984
No 94
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.31 E-value=9e-07 Score=76.42 Aligned_cols=80 Identities=18% Similarity=0.235 Sum_probs=59.9
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
...+.++.|+.|.|+ |.+ ...|.+|+|+..+- +. +..+ ..+|++.+.+|
T Consensus 18 P~~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p----g~-------------~~~~---------~~~~~~~~~pG 66 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP----AD-------------TAAK---------LSHKGLLFAAG 66 (98)
T ss_dssp SSEEEECTTCEEEEE--ECS---SCCEEEEECCSSSC----HH-------------HHHH---------HCEEEEECSTT
T ss_pred CCEEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC----cc-------------cccc---------ccccccccCCC
Confidence 346899999999886 655 35799999875321 10 0000 02577888999
Q ss_pred CEEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
....++| +.||.|.|||| .|...||...+.|
T Consensus 67 ~~~~~tf--~~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 67 ESFTSTF--TEPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp CEEEEEC--CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CEEEEEc--CCCeEEEEEcC--CccccCCeEEEEE
Confidence 8888877 79999999999 7999999999987
No 95
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.21 E-value=5e-06 Score=70.45 Aligned_cols=73 Identities=18% Similarity=0.319 Sum_probs=57.0
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
...+.++.|+.|+|+ |.+ ...|.+|+|+. . +...++..+++|
T Consensus 18 P~~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~-------~--------------------------~~~~~~~~~~~g 59 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWV--NNK---LAPHNVVVEGQ-------P--------------------------ELSHKDLAFSPG 59 (91)
T ss_dssp SSEEEECTTCEEEEE--ECS---SCCEEEEETTC-------G--------------------------GGCEEEEECSTT
T ss_pred CCEEEECCCCEEEEE--ECC---CCCcEEEEeCC-------C--------------------------ccCcccceeCCC
Confidence 346899999999876 554 35799998872 0 002466778888
Q ss_pred CEEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
....+.| +.||.|.|||| .|...||...+.|
T Consensus 60 ~~~~~~f--~~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 60 ETFEATF--SEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp CEEEEEC--CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CEEEEEe--CCCEEEEEEeC--CCccCCCEEEEEE
Confidence 8777777 89999999999 7999999999887
No 96
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.20 E-value=4.3e-06 Score=75.49 Aligned_cols=75 Identities=13% Similarity=0.091 Sum_probs=51.3
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcCCC
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGD 155 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~~ 155 (695)
+.|+|++||+|+ ++|.. .++++..+. ..+-||.... -+.||++++|.| +.+|+|+|+|. .+...
T Consensus 21 ~~i~V~~GdtV~--f~n~~--~~H~v~~~~-----~~~p~~~~~~---~~~pG~t~~~tF--~~~G~y~y~C~--~H~~~ 84 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTD--KGHNVETIK-----GMAPDGADYV---KTTVGQEAVVKF--DKEGVYGFKCA--PHYMM 84 (123)
T ss_dssp SEEEECTTCEEE--EECSS--SSCCCEECT-----TSSCTTCCCC---BCCTTSCEEEEC--CSCEEEEEECS--TTTTT
T ss_pred CEEEECCCCEEE--EEECC--CCcEEEEec-----ccCCCCccce---ecCCCCEEEEEe--CCCeEEEEEeC--Ccccc
Confidence 799999999965 45553 234443331 1122332222 357999988887 68999999997 46677
Q ss_pred CceeEEEEeCC
Q psy978 156 GSFGAFIIRKP 166 (695)
Q Consensus 156 Gl~G~lIV~~~ 166 (695)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999863
No 97
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.20 E-value=3.9e-06 Score=72.32 Aligned_cols=81 Identities=16% Similarity=0.254 Sum_probs=60.3
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
...+.++.|++|+| .|.+ ...|.||+|+..+- .+ ++ . + ..++|+..+.+|
T Consensus 17 P~~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~p------~~--~~--------~-~--------~~~~~~~~~~pG 66 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNA---GFPHNIVFDEDAIP------SG--VN--------A-D--------AISRDDYLNAPG 66 (98)
T ss_dssp SSEEEECTTCEEEE--EECS---SCCEEEEECGGGSC------TT--CC--------H-H--------HHCEEEEECSTT
T ss_pred CCEEEECCCCEEEE--EECC---CCceEEEEeCCCCC------Cc--cc--------c-c--------cccccceecCCC
Confidence 34689999999987 5765 45899999874220 00 00 0 0 014688899999
Q ss_pred CEEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
....++| +.||.|.|||| .|.+.||...+.|
T Consensus 67 ~~~~~tf--~~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 67 ETYSVKL--TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CEEEEEC--CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred CEEEEEe--CCCeEEEEEcC--CccccCCeEEEEE
Confidence 8888877 58999999999 6999999999887
No 98
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.18 E-value=4.8e-06 Score=75.17 Aligned_cols=76 Identities=9% Similarity=0.095 Sum_probs=51.0
Q ss_pred CCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcCC
Q psy978 75 GPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRG 154 (695)
Q Consensus 75 GP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~ 154 (695)
.+.|+|++||+|++ +|... ++++..+- ...-||.... -..||++++|.| +.+|+|+|+|. .+..
T Consensus 20 P~~i~V~~GdtV~f--~~~~~--~H~v~~~~-----~~~p~~~~~~---~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1paz_A 20 PAYIKANPGDTVTF--IPVDK--GHNVESIK-----DMIPEGAEKF---KSKINENYVLTV--TQPGAYLVKCT--PHYA 83 (123)
T ss_dssp SSEEEECTTCEEEE--EESSS--SCCCEECT-----TCSCTTCCCC---BCCTTCCEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEE--EECCC--CeEEEEec-----ccCCCCccce---ecCCCCEEEEEe--CCCEEEEEEeC--Cccc
Confidence 37999999999765 45431 34443321 1112332222 246899988887 68999999997 4666
Q ss_pred CCceeEEEEeCC
Q psy978 155 DGSFGAFIIRKP 166 (695)
Q Consensus 155 ~Gl~G~lIV~~~ 166 (695)
.||.|.|+|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1paz_A 84 MGMIALIAVGDS 95 (123)
T ss_dssp GTCEEEEEESSS
T ss_pred CCCEEEEEEcCC
Confidence 799999999863
No 99
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.12 E-value=1.3e-06 Score=75.23 Aligned_cols=78 Identities=19% Similarity=0.325 Sum_probs=57.9
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCC
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGG 553 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G 553 (695)
..+.++.|+.|.|+ |.+ ...|.+++++..+. .+ . . ...+++..+.+|.
T Consensus 19 ~~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~~------~~----~--------~---------~~~~~~~~~~~g~ 66 (97)
T 1b3i_A 19 KALSISAGDTVEFV--MNK---VGPHNVIFDKVPAG------ES----A--------P---------ALSNTKLAIAPGS 66 (97)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCCCBEEEECCTT------SC----H--------H---------HHCBCCCCCSCSC
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCCCCc------cc----c--------c---------cccccceecCCCC
Confidence 35899999998876 655 35799998875541 00 0 0 0014666778888
Q ss_pred EEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 554 FTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 554 ~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
...+.| +.||.|.|||+ .|.++||...+.|
T Consensus 67 ~~~~tf--~~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 67 FYSVTL--GTPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp CEEEEC--CSCSEEEEECS--STTTTTCEEEEEE
T ss_pred EEEEEe--CCCeEEEEEcc--ChhhcCCEEEEEE
Confidence 777777 89999999999 8999999999887
No 100
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.11 E-value=1.3e-05 Score=73.29 Aligned_cols=79 Identities=14% Similarity=0.191 Sum_probs=57.0
Q ss_pred cCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccc
Q psy978 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHT 149 (695)
Q Consensus 70 NG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~ 149 (695)
+..|=.+.|+|++||+|++ +|.. ..++++++... .+|......-.|.||++++|.| +++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d-~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF--~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGE-VMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECS-SSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECC-CCceEEEEeCC-------CCCcccccccccCCCCEEEEEc--CCCEEEEEEeCC
Confidence 4455558999999999765 5875 35677766432 2233333333588999999998 689999999976
Q ss_pred cCcCCCCceeEEEEe
Q psy978 150 GSQRGDGSFGAFIIR 164 (695)
Q Consensus 150 ~~q~~~Gl~G~lIV~ 164 (695)
+ . ||.|.|+|+
T Consensus 122 H--~--gM~G~I~V~ 132 (132)
T 3c75_A 122 H--P--FMRGKVIVE 132 (132)
T ss_dssp C--T--TCEEEEEEC
T ss_pred C--c--CCEEEEEEC
Confidence 3 2 999999984
No 101
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.09 E-value=2.2e-05 Score=71.34 Aligned_cols=93 Identities=8% Similarity=-0.026 Sum_probs=61.2
Q ss_pred CCCCCeEEEEeC-CEEEEEEeeCCCC------CCceEeeCCCcc-------CCCCCCCCC----CC-c-cccCCCCCCeE
Q psy978 72 QLPGPAVDVCVG-DHVIVNLHNGLME------ESTSIHWHGHHQ-------VDSPYMDGV----PH-L-TQCPVPPRSTF 131 (695)
Q Consensus 72 ~~PGP~I~v~~G-D~v~V~v~N~l~~------~~~siH~HGl~~-------~~~~~~DG~----p~-v-tqcpI~PG~~~ 131 (695)
+|=-..|.|++| |+|+|+|+|...- ....|--+|..+ ...+.++=+ +. + ..--|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343468999999 9999999998521 222333233110 000001100 10 0 01137899999
Q ss_pred EEEEEcC---CCeeeEEEccccCcCCCCceeEEEEeC
Q psy978 132 RYKFNAD---SPGTHFWHSHTGSQRGDGSFGAFIIRK 165 (695)
Q Consensus 132 tY~f~~~---~~GT~wYHsH~~~q~~~Gl~G~lIV~~ 165 (695)
++.|+++ ++|+|||.|-...++. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999997 9999999998887877 8999999963
No 102
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.08 E-value=1.2e-05 Score=71.08 Aligned_cols=74 Identities=14% Similarity=0.239 Sum_probs=56.5
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCC
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGG 553 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G 553 (695)
..+.++.|+.|.|.+.|.+ ...|-|++.+. .-+..++||.
T Consensus 38 ~~i~v~~G~~V~~~~~n~d---~~~H~~~i~~~-------------------------------------~~~~~i~pG~ 77 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKS---PISEGFSIDAF-------------------------------------GVQEVIKAGE 77 (112)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCEEEEEGGG-------------------------------------TEEEEECTTC
T ss_pred CEEEEeCCCEEEEEEEECC---CCeEEEEEcCC-------------------------------------CceeEeCCCC
Confidence 3589999999999999986 23333332211 1145688999
Q ss_pred EEEEEEEecCceeeEEeecchhhhhcCceEEEEec
Q psy978 554 FTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 554 ~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
...+.|.++.||.|.||||+.-|... |...+.|.
T Consensus 78 ~~~~~f~~~~~G~y~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 78 TKTISFTADKAGAFTIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp EEEEEEECCSCEEEEEBCSSSCTTTB-CCEEEEEE
T ss_pred EEEEEEECCCCEEEEEECCCCCchHH-CEEEEEEe
Confidence 99999999999999999999877543 88888875
No 103
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.04 E-value=1.9e-05 Score=68.02 Aligned_cols=83 Identities=12% Similarity=0.157 Sum_probs=59.5
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
...+.++.|++|.| .|.+ ...|.+|+|+..|- .+ .... .. ...+|++.+.+|
T Consensus 16 P~~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p------~g--~~~~------~~---------~~~~~~~~~~~G 67 (99)
T 1byp_A 16 PSDLSIASGEKITF--KNNA---GFPHNDLFDKKEVP------AG--VDVT------KI---------SMPEEDLLNAPG 67 (99)
T ss_dssp SSEEEECTTEEEEE--EECS---SCCBCCEECTTSSC------TT--CCHH------HH---------SCCTTCCBCSTT
T ss_pred CCEEEECCCCEEEE--EECC---CCcceEEEeCCCCc------cc--cccc------cc---------cccccceeeCCC
Confidence 44688999999877 5765 45899999985441 01 0000 00 012566778888
Q ss_pred CEEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
....++| +.||.|.|||+ .|.+.||...+.|
T Consensus 68 ~~~~~~f--~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 68 EEYSVTL--TEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp CEEEEEE--CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CEEEEEe--CCCcEEEEEcC--CccccCCEEEEEE
Confidence 8777777 59999999999 7999999999887
No 104
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.01 E-value=9.7e-06 Score=69.95 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=54.9
Q ss_pred CCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCC----ccccCCCCCCeEEEEEEcCCCeeeEEEcccc
Q psy978 75 GPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPH----LTQCPVPPRSTFRYKFNADSPGTHFWHSHTG 150 (695)
Q Consensus 75 GP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~----vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~ 150 (695)
.+.|+|++||+|++ .|.. ..++++....-.. -+|... .+.-.+.||+++++.| +++|+|+|+|-.
T Consensus 17 P~~i~v~~GdtV~~--~n~~-~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNA-GFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL--STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEEE--EECS-SCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC--CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEEE--EECC-CCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc--CCCEEEEEEchh-
Confidence 37999999999655 5774 3577777664211 122210 0112488999999888 799999999975
Q ss_pred CcCCCCceeEEEEe
Q psy978 151 SQRGDGSFGAFIIR 164 (695)
Q Consensus 151 ~q~~~Gl~G~lIV~ 164 (695)
+...||.|.|+|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 5556999999984
No 105
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.00 E-value=2.2e-05 Score=74.28 Aligned_cols=98 Identities=8% Similarity=-0.040 Sum_probs=63.3
Q ss_pred EEEc-C-CCCCCeEEE-EeCCEEEEEEeeCCCC------CCceEeeCCCcc------------CCCCCCCCCCCccccCC
Q psy978 67 TVVN-R-QLPGPAVDV-CVGDHVIVNLHNGLME------ESTSIHWHGHHQ------------VDSPYMDGVPHLTQCPV 125 (695)
Q Consensus 67 ~~iN-G-~~PGP~I~v-~~GD~v~V~v~N~l~~------~~~siH~HGl~~------------~~~~~~DG~p~vtqcpI 125 (695)
+..+ + +|=-..|.| +.||+|+|+|+|.... ....|--+|..+ .-.+..|..-....--|
T Consensus 47 I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l 126 (167)
T 3ay2_A 47 VESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLI 126 (167)
T ss_dssp EEECTTSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCB
T ss_pred EEeCCCceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceee
Confidence 4445 3 554468999 9999999999998631 122222233110 00000111000001137
Q ss_pred CCCCeEEEEEEcC--CCeeeEEEccccCcCCCCceeEEEEeC
Q psy978 126 PPRSTFRYKFNAD--SPGTHFWHSHTGSQRGDGSFGAFIIRK 165 (695)
Q Consensus 126 ~PG~~~tY~f~~~--~~GT~wYHsH~~~q~~~Gl~G~lIV~~ 165 (695)
.||++.++.|++. ++|+|||+|-...|+. ||.|-|+|.+
T Consensus 127 ~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999999999987 8999999998877777 8999999963
No 106
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.95 E-value=3.3e-05 Score=66.82 Aligned_cols=72 Identities=24% Similarity=0.478 Sum_probs=56.9
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCC
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGG 553 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G 553 (695)
..+.++.|+.|.|++.|.+ ...|.|.+.+..+ ...+++|.
T Consensus 28 ~~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~-------------------------------------~~~~~pg~ 67 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKG---KSEHTFTIKKLGI-------------------------------------DVVVESGK 67 (100)
T ss_dssp SEEEECTTSCEEEEEEECS---SSCEEEEEGGGTE-------------------------------------EEEECTTC
T ss_pred CEEEECCCCEEEEEEEcCC---CceEEEEEecCCc-------------------------------------ceeecCCc
Confidence 3589999999999999987 3456665543322 12356777
Q ss_pred EEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 554 FTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 554 ~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
...+.|.++.||.|.|+|. .|...||...+.|
T Consensus 68 ~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 68 EKNITVKPKSAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp EEEEEECCCSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred ceeEEEecccCceEEEECc--cccCCCCEEEEEE
Confidence 8889999999999999997 5999999998887
No 107
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=97.90 E-value=2.7e-05 Score=67.46 Aligned_cols=86 Identities=15% Similarity=0.190 Sum_probs=58.3
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
...+.++.|+.|+|+ |.+ ...|.++++.-... .+ .+... +.. .....+++.+.+|
T Consensus 16 P~~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~------~~-~~~~~-----~~~--------~~~~~~~~~~~pG 70 (102)
T 1kdj_A 16 PDSITVSAGEAVEFT--LVG---ETGHNIVFDIPAGA------PG-TVASE-----LKA--------ASMDENDLLSEDE 70 (102)
T ss_dssp SSEEEECTTCCEEEE--ECS---SSCBCCEECCCTTC------CH-HHHHH-----HHH--------TSCCTTCCBBTTB
T ss_pred CCEEEECCCCEEEEE--ECC---CCCeEEEEeCcccc------cc-cccch-----hhc--------ccccccceecCCC
Confidence 446899999999876 665 45799998731100 00 00000 000 0112467778888
Q ss_pred CEEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
....+.| +.||.|.|||+ .|.+.||...+.|
T Consensus 71 ~~~~~tf--~~~G~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 71 PSFKAKV--STPGTYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp CEEEECC--CSCEEEEEECS--TTGGGTCEEEEEE
T ss_pred CEEEEEe--CCCeEEEEEeC--CCcccCCeEEEEE
Confidence 8777777 89999999999 8999999999987
No 108
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.86 E-value=8e-05 Score=65.19 Aligned_cols=80 Identities=14% Similarity=0.161 Sum_probs=54.1
Q ss_pred EcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEcc
Q psy978 69 VNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSH 148 (695)
Q Consensus 69 iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH 148 (695)
-+..|=-+.|+|++||+|++ .|.. ...+++...... .|......-.|.||+++++.| +++|+|+|+|-
T Consensus 27 ~~~~F~P~~i~V~~G~tV~~--~N~d-~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf--~~~G~y~~~C~ 94 (106)
T 1id2_A 27 EKMKYLTPEVTIKAGETVYW--VNGE-VMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCT 94 (106)
T ss_dssp ETTEESSSEEEECTTCEEEE--EECS-SSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE--CSCEEEEEECS
T ss_pred EecEEeCCEEEECCCCEEEE--EECC-CCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe--CCCEEEEEEeC
Confidence 34455447999999999765 4775 345555544321 111111112478999999988 68999999997
Q ss_pred ccCcCCCCceeEEEEe
Q psy978 149 TGSQRGDGSFGAFIIR 164 (695)
Q Consensus 149 ~~~q~~~Gl~G~lIV~ 164 (695)
.+ . ||.|.|+|+
T Consensus 95 ~H--~--~M~G~I~V~ 106 (106)
T 1id2_A 95 PH--P--FMRGKVIVE 106 (106)
T ss_dssp SC--T--TCEEEEEEC
T ss_pred CC--C--CCEEEEEEC
Confidence 63 2 999999984
No 109
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.80 E-value=0.00012 Score=66.49 Aligned_cols=92 Identities=9% Similarity=-0.052 Sum_probs=59.3
Q ss_pred CCCCCeEEE-EeCCEEEEEEeeCCCC------CCceEeeCCCcc-------------CCCCCCCCCCCccccCCCCCCeE
Q psy978 72 QLPGPAVDV-CVGDHVIVNLHNGLME------ESTSIHWHGHHQ-------------VDSPYMDGVPHLTQCPVPPRSTF 131 (695)
Q Consensus 72 ~~PGP~I~v-~~GD~v~V~v~N~l~~------~~~siH~HGl~~-------------~~~~~~DG~p~vtqcpI~PG~~~ 131 (695)
+|=-..|.| ++||+|+|+|+|...- ....|-=+|..+ .-.+..|..-....--|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 443368999 9999999999998631 222222232110 00000111000001137999999
Q ss_pred EEEEEcC--CCee-eEEEccccCcCCCCceeEEEEe
Q psy978 132 RYKFNAD--SPGT-HFWHSHTGSQRGDGSFGAFIIR 164 (695)
Q Consensus 132 tY~f~~~--~~GT-~wYHsH~~~q~~~Gl~G~lIV~ 164 (695)
++.|++. .+|+ |||.|-...|+. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 9999997 7766 999998877777 899999995
No 110
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.78 E-value=5.8e-05 Score=67.91 Aligned_cols=72 Identities=14% Similarity=0.141 Sum_probs=49.1
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccccCcCCC
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGD 155 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~~ 155 (695)
+.|+|++||+|++ .|.. .+++++...- ..-+|.... -+.||++++|.| +++|+|||+|-.+ ..
T Consensus 21 ~~i~V~~GdtV~f--~n~d--~~H~v~~~~~-----~~p~~~~~~---~~~~g~t~~~tF--~~~G~y~y~C~~H--~~- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTD--KGHNVETIKG-----MIPDGAEAF---KSKINENYKVTF--TAPGVYGVKCTPH--PF- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESS--SSCCCEECTT-----CSCTTCCCC---BCCTTCCEEEEE--CSCEEEEEEETTE--EE-
T ss_pred CEEEECCCCEEEE--EECC--CCcEEEEccc-----ccCCCccee---ecCCCCEEEEEe--CCCEEEEEEeCCC--cc-
Confidence 7999999998655 5553 2444444321 112332222 357899999988 6899999999763 32
Q ss_pred CceeEEEEeC
Q psy978 156 GSFGAFIIRK 165 (695)
Q Consensus 156 Gl~G~lIV~~ 165 (695)
|.|.|+|.+
T Consensus 84 -M~G~I~V~~ 92 (122)
T 2ux6_A 84 -MVGVVQVGD 92 (122)
T ss_dssp -EEEEEEESS
T ss_pred -CEEEEEEeC
Confidence 999999986
No 111
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.73 E-value=0.00013 Score=80.77 Aligned_cols=94 Identities=23% Similarity=0.254 Sum_probs=66.6
Q ss_pred CCCce--EEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCC--CCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEE
Q psy978 59 ADGVK--RAITVVNRQLPGPAVDVCVGDHVIVNLHNGLM--EESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYK 134 (695)
Q Consensus 59 ~dG~~--~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~--~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~ 134 (695)
.+|.+ -.+...+-+|-.+.|+|.+||+|++.|+|... +..++....++. +- .-+.||++.++.
T Consensus 539 RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslG---------IK----~DaiPGrtnsvt 605 (638)
T 3sbq_A 539 RDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHG---------VS----MEISPQQTSSIT 605 (638)
T ss_dssp EETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT---------EE----EEECTTCEEEEE
T ss_pred cCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCCC---------ce----eeeCCCCeEEEE
Confidence 45543 34455666777789999999999999999631 233333333221 11 137899999999
Q ss_pred EEcCCCeeeEEEcccc-CcCCCCceeEEEEeC
Q psy978 135 FNADSPGTHFWHSHTG-SQRGDGSFGAFIIRK 165 (695)
Q Consensus 135 f~~~~~GT~wYHsH~~-~q~~~Gl~G~lIV~~ 165 (695)
|+++++|+|||||..- ...-.+|.|.|+|++
T Consensus 606 FtadkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 606 FVADKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp EECCSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred EEcCCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 9999999999999853 222247999999986
No 112
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.69 E-value=0.0002 Score=64.92 Aligned_cols=91 Identities=7% Similarity=-0.002 Sum_probs=59.6
Q ss_pred CCCCCeEEE-EeCCEEEEEEeeCCCCCC-----ceEee--CCCcc-------CCCCCCCCC----C-Cc-cccCCCCCCe
Q psy978 72 QLPGPAVDV-CVGDHVIVNLHNGLMEES-----TSIHW--HGHHQ-------VDSPYMDGV----P-HL-TQCPVPPRST 130 (695)
Q Consensus 72 ~~PGP~I~v-~~GD~v~V~v~N~l~~~~-----~siH~--HGl~~-------~~~~~~DG~----p-~v-tqcpI~PG~~ 130 (695)
+|=-..|.| ++||+|+|+|+|... .+ +++-+ .|..+ ...+.++=+ + .+ ..--|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~-~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet 92 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGS-LPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEK 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSS-CCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cEecCEEEEecCCCEEEEEEEECCC-CcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCE
Confidence 444468999 999999999999862 22 33322 22110 000001100 1 00 0113799999
Q ss_pred EEEEEEcC--CCee-eEEEccccCcCCCCceeEEEEe
Q psy978 131 FRYKFNAD--SPGT-HFWHSHTGSQRGDGSFGAFIIR 164 (695)
Q Consensus 131 ~tY~f~~~--~~GT-~wYHsH~~~q~~~Gl~G~lIV~ 164 (695)
.++.|++. .+|+ |||.|-...|+. ||.|.|+|.
T Consensus 93 ~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 93 DSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999997 7877 999999888887 899999983
No 113
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.68 E-value=0.00033 Score=63.45 Aligned_cols=91 Identities=10% Similarity=-0.018 Sum_probs=59.8
Q ss_pred CCCCCeEEE-EeCCEEEEEEeeCCCCCC-----ceEee--CCCc-------------cCCCCCCCCCCCccccCCCCCCe
Q psy978 72 QLPGPAVDV-CVGDHVIVNLHNGLMEES-----TSIHW--HGHH-------------QVDSPYMDGVPHLTQCPVPPRST 130 (695)
Q Consensus 72 ~~PGP~I~v-~~GD~v~V~v~N~l~~~~-----~siH~--HGl~-------------~~~~~~~DG~p~vtqcpI~PG~~ 130 (695)
+|=-..|.| +.|++|+|+|+|... .+ +++-+ .+.. ..-.+..|..-....--|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~-~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGK-LPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSC-SCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEECCC-CcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCE
Confidence 444468999 999999999999862 32 33322 1100 00000011100000113799999
Q ss_pred EEEEEEcC--CCee-eEEEccccCcCCCCceeEEEEe
Q psy978 131 FRYKFNAD--SPGT-HFWHSHTGSQRGDGSFGAFIIR 164 (695)
Q Consensus 131 ~tY~f~~~--~~GT-~wYHsH~~~q~~~Gl~G~lIV~ 164 (695)
+++.|++. ++|+ |+|.|-...|++ ||.|.|+|.
T Consensus 92 ~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 92 DSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999998 8995 999999888887 999999995
No 114
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.65 E-value=0.00019 Score=61.67 Aligned_cols=83 Identities=12% Similarity=0.178 Sum_probs=58.2
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
...+.++.|++|+| .|.+ ...|.++++...+- .+ .+. . .. ...++.+.+.+|
T Consensus 16 P~~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p------~~--~~~-----~-~~---------~~~~~~~~~~~G 67 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP------SG--VDA-----S-KI---------SMSEEDLLNAKG 67 (99)
T ss_dssp SSEEEECTTCEEEE--EECS---SCCBCCEECTTSSC------TT--CCH-----H-HH---------CCCTTCCBCSTT
T ss_pred CCEEEECCCCEEEE--EECC---CCceEEEEeCCCCc------cc--ccc-----c-cc---------ccccCccccCCC
Confidence 44689999999887 5765 45799998875431 00 000 0 00 012455667888
Q ss_pred CEEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
....++| +.||.|.|||+ .|..+||...+.|
T Consensus 68 ~~~~~tf--~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 68 ETFEVAL--SNKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp CEEEEEC--CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CEEEEEE--CCCceEEEEcC--CCcccCCEEEEEE
Confidence 8777776 59999999999 7999999999887
No 115
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.58 E-value=0.0002 Score=80.80 Aligned_cols=78 Identities=19% Similarity=0.273 Sum_probs=62.3
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
...+.++.|+.|+|.+.|.+...+..|.|+++++.+. ..+.||
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~-------------------------------------~~i~PG 554 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA-------------------------------------MEIGPQ 554 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE-------------------------------------EEECTT
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc-------------------------------------eeeCCC
Confidence 4578999999999999997532245799988875432 236778
Q ss_pred CEEEEEEEecCceeeEEeec---chhhhhcCceEEEEecc
Q psy978 553 GFTIIRFHATNPGYWLFHCH---IEFHVETGMALVFKVGE 589 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCH---i~~H~~~GM~~v~~V~~ 589 (695)
....++|.++.||.|.|||| ...|. ||...+.|.+
T Consensus 555 ~t~t~~Fta~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 555 MTSSVTFVAANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp CEEEEEEECCSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CeEEEEEECCCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 88899999999999999999 45675 9999999864
No 116
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.45 E-value=0.00034 Score=65.54 Aligned_cols=91 Identities=18% Similarity=0.295 Sum_probs=59.1
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCC
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGG 553 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G 553 (695)
..+.++.|+.|.+++.|.+. ...|-|-++.. + .++... . . ....... ..-+..|.||.
T Consensus 61 p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~-------~---~~~~~~--~-~-~~~~~~~------~~~~~~i~PG~ 118 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNK--GFGHSFDITKK-------G---PPYAVM--P-V-IDPIVAG------TGFSPVPKDGK 118 (154)
T ss_dssp CEEEECTTCEEEEEEEECCT--TCCCCCEEESC-------C---SCCCSS--C-C-CCSEEEE------BCCCCCCBTTB
T ss_pred CEEEEeCCCEEEEEEEcCCC--CeeeEEEEeec-------C---cchhcc--c-c-ccccccc------cccccccCCCC
Confidence 35899999999999999741 34565554421 1 011000 0 0 0000000 00112567888
Q ss_pred --EEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 554 --FTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 554 --~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
...++|.+ .||.+.||||+--|...||-..+.|
T Consensus 119 sgt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 119 FGYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred ceEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 88999999 9999999999999999999998887
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.15 E-value=0.0012 Score=57.37 Aligned_cols=72 Identities=18% Similarity=0.216 Sum_probs=49.8
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCC
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGG 553 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G 553 (695)
..+.++.|+.|+|+ |.+ ...|.+|+|+.. .|.. .-++-.+++|.
T Consensus 33 ~~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~--------~g~~-----------------------~~~~~~~~pG~ 76 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NRE---AMPHNVHFVAGV--------LGEA-----------------------ALKGPMMKKEQ 76 (105)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT--------SSSS-----------------------CEECCCBCTTE
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEcCCC--------CCcc-----------------------cccccccCCCC
Confidence 46899999999885 765 457999987521 0100 00111256776
Q ss_pred EEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 554 FTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 554 ~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
...+.| +.||.+.|||++ |. ||...+.|
T Consensus 77 ~~~~tf--~~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 77 AYSLTF--TEAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEEEEE--CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred EEEEEe--CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 666666 899999999998 65 99988877
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=96.80 E-value=0.0066 Score=54.25 Aligned_cols=89 Identities=12% Similarity=0.112 Sum_probs=54.8
Q ss_pred CCCCCeEEEEe-CCEEEEEEeeCCCC------CCceEeeC---------CCccC-CCCCCC-CCCCc--cccCCCCCCeE
Q psy978 72 QLPGPAVDVCV-GDHVIVNLHNGLME------ESTSIHWH---------GHHQV-DSPYMD-GVPHL--TQCPVPPRSTF 131 (695)
Q Consensus 72 ~~PGP~I~v~~-GD~v~V~v~N~l~~------~~~siH~H---------Gl~~~-~~~~~D-G~p~v--tqcpI~PG~~~ 131 (695)
+|=-..|.|.+ |++|+|+|.|...- ....|--- |+..- ...++. +-+.+ -.--|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 34447899986 99999999999621 22222211 11100 001110 11111 11127999999
Q ss_pred EEEEEcC---CCeeeEEEccccCcCCCCceeEEEEe
Q psy978 132 RYKFNAD---SPGTHFWHSHTGSQRGDGSFGAFIIR 164 (695)
Q Consensus 132 tY~f~~~---~~GT~wYHsH~~~q~~~Gl~G~lIV~ 164 (695)
+..|++. ++|+|.|-|. .++ ||.|.|+|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999997 8999999999 555 899999983
No 119
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.31 E-value=0.017 Score=52.50 Aligned_cols=73 Identities=15% Similarity=0.323 Sum_probs=53.6
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccc--c-Cc
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHT--G-SQ 152 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~--~-~q 152 (695)
..|.|..|++|++.++|.. ..++.-.-++.. . .-+.||+.-++.|+++++|+|+|+|.. + .+
T Consensus 60 ~~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~---------k----~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD--VIHGFHVEGTNI---------N----VEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS--SCEEEEETTSSC---------E----EEECBTBCEEEEEECCSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC--ccceEEecCCCc---------e----eEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc
Confidence 5899999999999999973 333333222211 1 126789989999999999999999964 2 33
Q ss_pred CCCCceeEEEEeC
Q psy978 153 RGDGSFGAFIIRK 165 (695)
Q Consensus 153 ~~~Gl~G~lIV~~ 165 (695)
.+|.|.++|.+
T Consensus 125 --~~M~g~v~V~~ 135 (135)
T 2cua_A 125 --QNMFGTIVVKE 135 (135)
T ss_dssp --TTCEEEEEEEC
T ss_pred --CCCEEEEEEEC
Confidence 48999999863
No 120
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=96.31 E-value=0.022 Score=48.56 Aligned_cols=81 Identities=16% Similarity=0.321 Sum_probs=53.8
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
...+.++.|+.|+|+ |.+ ...|-+.++...+ ..| ++. + ....+...+.+|
T Consensus 17 P~~i~v~~GdtV~~~--n~~---~~~H~v~~~~~~~------p~g--~~~---------~--------~~~~~~~~~~~g 66 (98)
T 1iuz_A 17 PSKISVAAGEAIEFV--NNA---GFPHNIVFDEDAV------PAG--VDA---------D--------AISYDDYLNSKG 66 (98)
T ss_dssp SSEEEECTTCEEEEE--ECS---SCCEEEEECTTSS------CTT--CCH---------H--------HHCEEEEECSTT
T ss_pred CCEEEECCCCEEEEE--ECC---CCCEEEEEeCCCC------ccc--ccc---------c--------cccccccccCCC
Confidence 446899999999886 654 3467666543110 000 000 0 001334567888
Q ss_pred CEEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
....+.| +.||.+.|+|-+ |..+||...+.|
T Consensus 67 ~~~~~tf--~~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 67 ETVVRKL--STPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp CEEEEEC--CSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred CEEEEEc--CCCEEEEEEchh--hccCCCEEEEEE
Confidence 8777777 899999999986 999999998887
No 121
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.28 E-value=0.0069 Score=54.58 Aligned_cols=37 Identities=27% Similarity=0.506 Sum_probs=30.2
Q ss_pred CCCCEEEEEEEecCceeeEEeecchhhhhcCceEEEEeccC
Q psy978 550 PDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEH 590 (695)
Q Consensus 550 p~~G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~~ 590 (695)
.+|....+.| +.||.|.|||- .|..+||...+.|++.
T Consensus 61 ~pGet~s~TF--~~pG~y~y~C~--~H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 61 KINEEITVTL--SKPGVYMYQCA--PHVGMGMIGAIVVGEP 97 (127)
T ss_dssp CTTCCCEEEC--CSCEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred CCCCEEEEEe--CCCeEEEEEeC--CCCcCCcEEEEEECcC
Confidence 3455555555 89999999999 6999999999999863
No 122
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=96.25 E-value=0.0081 Score=53.87 Aligned_cols=75 Identities=17% Similarity=0.247 Sum_probs=50.5
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCC
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGG 553 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G 553 (695)
..+.++.|++|+|+..+ ..|-+..+...+ |.-.+.+.+.+|.
T Consensus 22 ~~i~V~~GDTV~f~n~~------~~Hnv~~~~~~~--------------------------------p~g~~~~~~~pg~ 63 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD------KSHNAESVREVW--------------------------------PEGVAPVKGGFSK 63 (124)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTTTS--------------------------------CTTSCCCBCCTTC
T ss_pred CEEEECCCCEEEEEECC------CCccEEEeCCcC--------------------------------CCCccccccCCCC
Confidence 36899999999988543 257666542100 0000111234566
Q ss_pred EEEEEEEecCceeeEEeecchhhhhcCceEEEEeccC
Q psy978 554 FTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEH 590 (695)
Q Consensus 554 ~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~~ 590 (695)
...+.| +.||.|.|||- .|..+||...+.|+++
T Consensus 64 t~s~TF--~~~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 64 EVVFNA--EKEGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp CEEEEC--CSSEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred EEEEEe--CCCeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 555666 89999999995 8999999999999863
No 123
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.08 E-value=0.015 Score=52.09 Aligned_cols=36 Identities=25% Similarity=0.421 Sum_probs=30.6
Q ss_pred CCCCEEEEEEEecCceeeEEeecchhhhhcCceEEEEecc
Q psy978 550 PDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGE 589 (695)
Q Consensus 550 p~~G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~ 589 (695)
.+|....++| +.||.|.|+|- .|...||-..+.|++
T Consensus 59 ~pg~t~s~TF--~~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 59 KINESYTLTV--TEPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CTTCCEEEEE--CSCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CCCCEEEEEe--CCCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 4566566666 89999999999 799999999999985
No 124
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.80 E-value=0.036 Score=52.29 Aligned_cols=85 Identities=12% Similarity=0.195 Sum_probs=60.4
Q ss_pred EEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeE
Q psy978 65 AITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHF 144 (695)
Q Consensus 65 ~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~w 144 (695)
.+...+-+|-...|.+..|++|++.++|.. ..++...-++..+ + -+.||+.-++.|+++++|+|+
T Consensus 82 ~m~a~~~~f~Pn~l~VP~G~~Vr~~vTS~D--ViHsf~IP~lgik----~---------da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 82 YVLAFAFGYQPNPIEVPQGAEIVFKITSPD--VIHGFHVEGTNIN----V---------EVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEEETTEEESSSEEEETTSEEEEEEECSS--SCEEEEETTSSCE----E---------EECTTBCEEEEEECCSCEEEE
T ss_pred EEEEEeceEecCEEEEeCCCeEEEEEecCC--ceEEEEECCCCeE----E---------EecCCceeEEEEEeCCCEEEE
Confidence 344444455446899999999999999973 4444433332211 1 256899999999999999999
Q ss_pred EEccc-cCcCCCCceeEEEEe
Q psy978 145 WHSHT-GSQRGDGSFGAFIIR 164 (695)
Q Consensus 145 YHsH~-~~q~~~Gl~G~lIV~ 164 (695)
+.|.. -...-.+|.|-++|.
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99984 333445799999986
No 125
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=95.50 E-value=0.038 Score=47.86 Aligned_cols=72 Identities=15% Similarity=0.098 Sum_probs=48.4
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCC
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGG 553 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G 553 (695)
..+.++.|+.|+|+ |.+ ...|-+++.... .+ . . .-++-.+.+|.
T Consensus 34 ~~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~--------~~-~--------------~--------~~~s~~l~~g~ 77 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI--------VG-E--------------D--------AFRGEMMTKDQ 77 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT--------SS-S--------------S--------CEECCCBCTTE
T ss_pred CEEEECCCCEEEEE--ECC---CCcEEEEEeCCC--------CC-c--------------c--------cccccccCCCC
Confidence 46899999999887 665 346766654321 00 0 0 01222356676
Q ss_pred EEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 554 FTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 554 ~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
...+.| +.||.+.|+|-+ |. ||...+.|
T Consensus 78 ~~~~tf--~~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 78 AYAITF--NEAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEEEEE--CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred EEEEEe--CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 666666 899999999987 76 99998887
No 126
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.99 E-value=0.062 Score=48.58 Aligned_cols=72 Identities=15% Similarity=0.114 Sum_probs=49.1
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCC
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGG 553 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G 553 (695)
..+.++.|+.|+|+ |.+ ...|-+++.... .|. ..-++-.+++|.
T Consensus 60 ~~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~--------~g~-----------------------~~~~s~~l~pG~ 103 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI--------VGE-----------------------DAFRGEMMTKDQ 103 (132)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT--------SSS-----------------------SCEECCCBCTTE
T ss_pred CEEEECCCCEEEEE--ECC---CCceEEEEeCCC--------CCc-----------------------ccccccccCCCC
Confidence 46899999999886 665 346777664321 000 011222356777
Q ss_pred EEEEEEEecCceeeEEeecchhhhhcCceEEEEe
Q psy978 554 FTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587 (695)
Q Consensus 554 ~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V 587 (695)
...+.| +.||.+.|||-+ |. ||...+.|
T Consensus 104 t~~~tF--~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 104 AYAITF--NEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp EEEEEE--CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred EEEEEc--CCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 666777 799999999987 76 99998887
No 127
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=94.42 E-value=0.067 Score=47.75 Aligned_cols=35 Identities=29% Similarity=0.537 Sum_probs=28.5
Q ss_pred CCCEEEEEEEecCceeeEEeecchhhhhcCceEEEEecc
Q psy978 551 DGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGE 589 (695)
Q Consensus 551 ~~G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~ 589 (695)
+|....+.| +.||.|.|+|- .|..+||...+.|++
T Consensus 60 pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 60 INENYVLTV--TQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp TTCCEEEEC--CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCEEEEEe--CCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 455444555 89999999997 599999999999975
No 128
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=94.10 E-value=0.069 Score=47.68 Aligned_cols=36 Identities=28% Similarity=0.560 Sum_probs=29.2
Q ss_pred CCCCEEEEEEEecCceeeEEeecchhhhhcCceEEEEecc
Q psy978 550 PDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGE 589 (695)
Q Consensus 550 p~~G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~ 589 (695)
.+|....+.| +.||.|.|+|- .|..+||...+.|++
T Consensus 59 ~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 59 TVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp CTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred CCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 3555555555 79999999998 599999999999975
No 129
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.92 E-value=0.23 Score=55.30 Aligned_cols=79 Identities=20% Similarity=0.249 Sum_probs=59.1
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
...+.++.|+.|+|+|.|.+...+..|.|.+.++... +.+.||
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK-------------------------------------~DaiPG 599 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS-------------------------------------MEISPQ 599 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE-------------------------------------EEECTT
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce-------------------------------------eeeCCC
Confidence 4568899999999999997422245777776654321 135667
Q ss_pred CEEEEEEEecCceeeEEeecchhhh-hcCceEEEEec
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEFHV-ETGMALVFKVG 588 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~H~-~~GM~~v~~V~ 588 (695)
....+.|.++.||.|.+||...-|. ..+|...+.|.
T Consensus 600 rtnsvtFtadkPGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 600 QTSSITFVADKPGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp CEEEEEEECCSCEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CeEEEEEEcCCCEEEEEECCCcCCCCcccceEEEEEe
Confidence 7889999999999999999975543 25798888875
No 130
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=93.01 E-value=0.15 Score=45.72 Aligned_cols=77 Identities=17% Similarity=0.184 Sum_probs=46.9
Q ss_pred eeEEE-ecCcEEEEEEEeCCCCC---ccEEEEEcCcc-eeEe-------cCCCCcccee----EEeEEEEcCCceEEEEE
Q psy978 237 EVFTV-KQGHSYRFRIINAGYLN---CPIELSIANHT-LTAI-------NSDGGDIKPI----SVGSIVSYAGERWDFIL 300 (695)
Q Consensus 237 ~~~~v-~~G~~~rlRliNa~~~~---~~~~~~i~gh~-~~Vi-------a~DG~~v~p~----~~d~l~l~pGeR~dVlv 300 (695)
..++| ++|++++|.+.|.+... ..+.|.|.... +.-+ +.+-.++.+. ...+-.|.|||++++.+
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEE
Confidence 48999 99999999999998652 01233333211 1000 1122333221 22333689999999999
Q ss_pred EcC--CCCcceEEEE
Q psy978 301 NAT--HHVGNYWIKM 313 (695)
Q Consensus 301 ~a~--~~~g~Y~Ir~ 313 (695)
+++ +++++|+...
T Consensus 98 ~~~~l~~G~~Y~f~C 112 (128)
T 1nwp_A 98 DVSKLAAGEKYGFFC 112 (128)
T ss_dssp EGGGSCTTSCEEEEC
T ss_pred eccccCCCceEEEEE
Confidence 987 5655698764
No 131
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=92.89 E-value=0.41 Score=43.33 Aligned_cols=71 Identities=23% Similarity=0.328 Sum_probs=50.5
Q ss_pred eeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCE
Q psy978 475 VVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGF 554 (695)
Q Consensus 475 ~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~ 554 (695)
.+.++.|+.|+|++.|.+ ..|- |.|- ..+ .| +.+.||..
T Consensus 61 ~l~Vp~G~~V~~~vts~D----V~Hs-------f~ip---~~~-------------------------~k--~d~~PG~~ 99 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD----VIHG-------FHVE---GTN-------------------------IN--VEVLPGEV 99 (135)
T ss_dssp SEEEETTSEEEEEEEBSS----SCEE-------EEET---TSS-------------------------CE--EEECBTBC
T ss_pred EEEEcCCCEEEEEEEeCC----ccce-------EEec---CCC-------------------------ce--eEeCCCCc
Confidence 388999999999998864 3343 4431 111 01 23455666
Q ss_pred EEEEEEecCceeeEEeecc---hhhhhcCceEEEEec
Q psy978 555 TIIRFHATNPGYWLFHCHI---EFHVETGMALVFKVG 588 (695)
Q Consensus 555 ~vIRF~AdNPG~Wl~HCHi---~~H~~~GM~~v~~V~ 588 (695)
..+.|.++.||.+.++|.. ..| .+|-..+.|.
T Consensus 100 ~~~~~~~~~~G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 100 STVRYTFKRPGEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCEEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEEcCCCEEEEEECcccCCCCc--CCCEEEEEEE
Confidence 7899999999999999977 667 4888888774
No 132
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=91.88 E-value=0.24 Score=44.05 Aligned_cols=34 Identities=29% Similarity=0.396 Sum_probs=26.8
Q ss_pred CCCCEEEEEEEecCceeeEEeecchhhhhcCceEEEEecc
Q psy978 550 PDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGE 589 (695)
Q Consensus 550 p~~G~~vIRF~AdNPG~Wl~HCHi~~H~~~GM~~v~~V~~ 589 (695)
.+|....+.| +.||.|.|+|-+ |.. |...+.|.+
T Consensus 59 ~~g~t~~~tF--~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 59 KINENYKVTF--TAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp CTTCCEEEEE--CSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred CCCCEEEEEe--CCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 3555555666 899999999987 776 999999975
No 133
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=88.98 E-value=0.85 Score=42.78 Aligned_cols=45 Identities=16% Similarity=0.171 Sum_probs=38.5
Q ss_pred ccceeEeCCCCEEEEEEEec--CceeeEEeecchhhhhcCceEEEEec
Q psy978 543 LKDTVTVPDGGFTIIRFHAT--NPGYWLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 543 ~rDTv~Vp~~G~~vIRF~Ad--NPG~Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
+..|..|.+|....|.|.++ .||.+-|+|-+=-|.. ||-..|.|.
T Consensus 120 l~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 120 VAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred hccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 34566788999999999988 8999999999888888 999998885
No 134
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=87.75 E-value=1.9 Score=38.61 Aligned_cols=102 Identities=19% Similarity=0.247 Sum_probs=61.6
Q ss_pred eeeeeCCC-CEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccch-hcccccccccCCCC---C-CCcccee
Q psy978 474 NVVNVPLE-SVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDV-IDMDAKGLIRRNLK---D-APLKDTV 547 (695)
Q Consensus 474 ~~~~v~~g-~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~-~~~~~~g~~~~n~~---~-P~~rDTv 547 (695)
..+.++.| +.|.+++.|.+. . |---=+|.|-+...+. .+.+ .+.-..+. ..++. + -....|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~---~--~~~~m~H~~vi~~~~~------~~~~~~~~m~~~~-~~~~v~~~~~~~~~~t~ 85 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGH---M--PKTGMGHNWVLAKSAD------VGDVAKEGAHAGA-DNNFVTPGDKRVIAFTP 85 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSS---S--CHHHHCBCCEEEEGGG------HHHHHHHHHTTCG-GGTTSCTTCTTCSEECC
T ss_pred CeEEEcCCCeEEEEEEEECCC---C--cccccccceEEecCcc------hhhhHHHhhhccc-cccccccccccceeeee
Confidence 35889999 999999999872 1 1000123444443221 0000 00000000 00000 0 1133456
Q ss_pred EeCCCCEEEEEEEec---CceeeEEeecchhhhhcCceEEEEec
Q psy978 548 TVPDGGFTIIRFHAT---NPGYWLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 548 ~Vp~~G~~vIRF~Ad---NPG~Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
.|.+|....|.|.++ .||.+-|.|-+--|.. ||-..+.|.
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 688999999999997 9999999999888888 899988875
No 135
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=86.24 E-value=2.6 Score=39.42 Aligned_cols=73 Identities=22% Similarity=0.316 Sum_probs=52.5
Q ss_pred eeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCCE
Q psy978 475 VVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGF 554 (695)
Q Consensus 475 ~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G~ 554 (695)
.+.+|.|+.|.+.+.|.+ ..|.|.+=+.... +.+-||-.
T Consensus 94 ~l~VP~G~~Vr~~vTS~D----ViHsf~IP~lgik-------------------------------------~da~PG~~ 132 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPD----VIHGFHVEGTNIN-------------------------------------VEVLPGEV 132 (168)
T ss_dssp SEEEETTSEEEEEEECSS----SCEEEEETTSSCE-------------------------------------EEECTTBC
T ss_pred EEEEeCCCeEEEEEecCC----ceEEEEECCCCeE-------------------------------------EEecCCce
Confidence 388999999999999864 4566544322111 22345666
Q ss_pred EEEEEEecCceeeEEeecc-hhhhhcCceEEEEec
Q psy978 555 TIIRFHATNPGYWLFHCHI-EFHVETGMALVFKVG 588 (695)
Q Consensus 555 ~vIRF~AdNPG~Wl~HCHi-~~H~~~GM~~v~~V~ 588 (695)
..+.|.++.||.+.+.|.. --+...+|...+.|.
T Consensus 133 n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 133 STVRYTFKRPGEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEEECCSCEEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred eEEEEEeCCCEEEEEECCcCCCCCcCCCEEEEEEe
Confidence 7899999999999999984 445557888888775
No 136
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=84.44 E-value=2.6 Score=37.40 Aligned_cols=101 Identities=20% Similarity=0.265 Sum_probs=60.8
Q ss_pred ceeeeeCC-CCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchh-cccccccc-cCC-C-CCCCcccee
Q psy978 473 TNVVNVPL-ESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVI-DMDAKGLI-RRN-L-KDAPLKDTV 547 (695)
Q Consensus 473 ~~~~~v~~-g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~-~~~~~g~~-~~n-~-~~P~~rDTv 547 (695)
..-+.++. |+.|.++|.|.+. =|--.=||+|-+...+ +...+. +....++. .|- . +....-.|.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~-----~p~~~M~Hn~Vl~~~~------~~~~~~~~~m~~~~~~~y~~~~d~~via~t~ 85 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGN-----LPKNVMGHNWVLSTAA------DMQGVVTDGMASGLDKDYLKPDDSRVIAHTK 85 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSS-----CCHHHHCBCCEEEEHH------HHHHHHHHHHHHCGGGTTSCTTCTTCCEECC
T ss_pred cCEEEEecCCCEEEEEEEECCc-----ccccccCceEEEcccc------hHHHHHHHHHhcChhhccCCCCCccceeccc
Confidence 34588876 9999999999872 2222224565544221 111110 00011110 110 0 122455677
Q ss_pred EeCCCCEEEEEEEec---CceeeEEeecchhhhhcCceEEEEec
Q psy978 548 TVPDGGFTIIRFHAT---NPGYWLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 548 ~Vp~~G~~vIRF~Ad---NPG~Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
.|.+|....|-|.+. .||.+-|-|- -|. ||-..+.|.
T Consensus 86 ~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 86 LIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp CBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred eeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 799999999999987 8999999999 888 999888773
No 137
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=80.65 E-value=5.4 Score=35.49 Aligned_cols=44 Identities=20% Similarity=0.354 Sum_probs=37.5
Q ss_pred cceeEeCCCCEEEEEEEec--Ccee-eEEeecchhhhhcCceEEEEec
Q psy978 544 KDTVTVPDGGFTIIRFHAT--NPGY-WLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 544 rDTv~Vp~~G~~vIRF~Ad--NPG~-Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
..|..|.+|....|.|.+. .||. +-|.|-+--|.. ||-..+.|.
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 3455688999999999998 8995 999999888888 999998885
No 138
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=78.82 E-value=6.3 Score=35.06 Aligned_cols=43 Identities=21% Similarity=0.368 Sum_probs=36.3
Q ss_pred ceeEeCCCCEEEEEEEec--Ccee-eEEeecchhhhhcCceEEEEec
Q psy978 545 DTVTVPDGGFTIIRFHAT--NPGY-WLFHCHIEFHVETGMALVFKVG 588 (695)
Q Consensus 545 DTv~Vp~~G~~vIRF~Ad--NPG~-Wl~HCHi~~H~~~GM~~v~~V~ 588 (695)
.|..|.+|....|-|.++ .||. +-|.|-+--|.. ||-..+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 455688999999999998 7866 889999888888 899998885
No 139
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=70.36 E-value=13 Score=35.90 Aligned_cols=73 Identities=12% Similarity=-0.028 Sum_probs=52.3
Q ss_pred eEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccc-cCcCCC
Q psy978 77 AVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHT-GSQRGD 155 (695)
Q Consensus 77 ~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~-~~q~~~ 155 (695)
.|.+..|+.|++.|++.. .-++.-.-.+..+ +| +-||..-+..|.++++|+|+..|.. -...-.
T Consensus 42 ~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK----~d---------aiPGr~n~l~~~~~~pG~y~g~CsE~CG~~Hs 106 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQ----IY---------AMAGMQTRLHLIANEPGTYDGICAEICGPGHS 106 (205)
T ss_dssp EEEEETTSCEEEEEEESS--SCEEEEEGGGTEE----EE---------ECTTCCEEEEECCSSSEEEEEEECSCCSTTST
T ss_pred eEEEeCCCEEEEEEecCC--ceeeEEecccCcE----EE---------ecCCceEEEEEEeCCCeEEEEEcccccccchh
Confidence 689999999999999984 3333333322211 23 5588999999999999999999984 222334
Q ss_pred CceeEEEEe
Q psy978 156 GSFGAFIIR 164 (695)
Q Consensus 156 Gl~G~lIV~ 164 (695)
.|.+.++|.
T Consensus 107 ~M~~~v~vv 115 (205)
T 1cyx_A 107 GMKFKAIAT 115 (205)
T ss_dssp TCCEEEEEE
T ss_pred hceEEEEEE
Confidence 578888887
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=68.55 E-value=17 Score=31.89 Aligned_cols=71 Identities=17% Similarity=0.217 Sum_probs=48.8
Q ss_pred cCcEE--EEEEEeCCCCCccEEEEEc-Ccc--eeEecCCCCccc--------eeEEeEEEEcCCceEEEEEEcCC--CCc
Q psy978 243 QGHSY--RFRIINAGYLNCPIELSIA-NHT--LTAINSDGGDIK--------PISVGSIVSYAGERWDFILNATH--HVG 307 (695)
Q Consensus 243 ~G~~~--rlRliNa~~~~~~~~~~i~-gh~--~~Via~DG~~v~--------p~~~d~l~l~pGeR~dVlv~a~~--~~g 307 (695)
.|+.+ .|.+.|.+... ..|.+. |++ |.|...+|..+- ........|.|||...+-...++ ++|
T Consensus 16 ~g~~v~~~ltv~N~s~~~--v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG 93 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERA--IEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPG 93 (120)
T ss_dssp CSSCEEEEEEEEECSSSC--EEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSE
T ss_pred CCCeEEEEEEEEcCCCCc--EEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCc
Confidence 45554 57778988765 445554 554 555555676552 33567899999999998888874 479
Q ss_pred ceEEEEee
Q psy978 308 NYWIKMRG 315 (695)
Q Consensus 308 ~Y~Ir~~~ 315 (695)
.|.+.+.-
T Consensus 94 ~Ytl~a~l 101 (120)
T 3isy_A 94 TYEVKVTF 101 (120)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEE
Confidence 99887643
No 141
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=66.54 E-value=11 Score=32.68 Aligned_cols=47 Identities=15% Similarity=0.230 Sum_probs=34.3
Q ss_pred cEEEEEEEeCCCCCccEEEEEcCc-ceeEecCCCCccceeEEeEEEEcCCceEEEEEE
Q psy978 245 HSYRFRIINAGYLNCPIELSIANH-TLTAINSDGGDIKPISVGSIVSYAGERWDFILN 301 (695)
Q Consensus 245 ~~~rlRliNa~~~~~~~~~~i~gh-~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~ 301 (695)
-.|+|+|+|.+...+.+.|++.|. .+.+++ +. .+.|.|||..++-|.
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~~---~i~v~~g~~~~~~v~ 80 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------KQ---TIQVEPGEVLNLPMS 80 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-------CC---EEEECTTCEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-------CC---cEEECCCCEEEEEEE
Confidence 479999999998887788888773 355443 11 389999997666554
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=55.62 E-value=24 Score=36.07 Aligned_cols=77 Identities=16% Similarity=0.035 Sum_probs=54.5
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccc-cCcCC
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHT-GSQRG 154 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~-~~q~~ 154 (695)
..|.+..|+.|++.+++.. .-++.....+..+ +| +-||..-+..|.++++|+|+..|.. -...-
T Consensus 189 N~lvlP~g~~V~~~ltS~D--ViHsf~iP~lg~k----~d---------aiPG~~n~~~~~~~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD--VIHAWTIPAFAVK----QD---------AVPGRIAQLWFSVDQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEESS--SCEEEEEGGGTEE----EE---------ECTTCCEEEEEECSSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeCC--ccceeeEcccCce----EE---------ecCCceEEEEEEeCCCEEEEEEcccccCcCc
Confidence 4699999999999999974 3344333333221 33 4578888999999999999999984 23333
Q ss_pred CCceeEEEEeCCC
Q psy978 155 DGSFGAFIIRKPR 167 (695)
Q Consensus 155 ~Gl~G~lIV~~~~ 167 (695)
..|.+.++|.+++
T Consensus 254 s~M~~~v~vvs~~ 266 (298)
T 3hb3_B 254 AYMPIVVKAVSQE 266 (298)
T ss_dssp TSCCEEEEEECHH
T ss_pred cCCeeEEEEEcHH
Confidence 4578888887643
No 143
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=51.67 E-value=22 Score=35.54 Aligned_cols=75 Identities=17% Similarity=0.082 Sum_probs=53.0
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccc--cCcC
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHT--GSQR 153 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~--~~q~ 153 (695)
..|.+..|+.|++.++... .-++....++..+ +| +-||..-+..|.++++|+|+..|.. |..-
T Consensus 171 n~l~lP~g~~v~~~~tS~D--ViHsf~ip~l~~k----~d---------a~PG~~n~~~~~~~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD--VIHSWTVPAFGVK----QD---------AVPGRLAQLWFRAEREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEESS--SCEEEEEGGGTEE----EE---------ECBTCCEEEEEECCSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEECc--ccceeeecccCce----EE---------ecCCceeEEEEecCCcEEEEEEChHhcccCc
Confidence 3699999999999999884 4344443333221 33 4578888899999999999999983 3222
Q ss_pred CCCceeEEEEeCC
Q psy978 154 GDGSFGAFIIRKP 166 (695)
Q Consensus 154 ~~Gl~G~lIV~~~ 166 (695)
..|.+.++|.++
T Consensus 236 -~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 -AYMPITVKVVSE 247 (262)
T ss_dssp -GGCCEEEEEECH
T ss_pred -ccCeEEEEEEcH
Confidence 357777877654
No 144
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=39.37 E-value=39 Score=32.99 Aligned_cols=75 Identities=11% Similarity=-0.051 Sum_probs=52.5
Q ss_pred CeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccc--cCcC
Q psy978 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHT--GSQR 153 (695)
Q Consensus 76 P~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~--~~q~ 153 (695)
..+.+..|..|++.++... .-++.....+..+ +| .-||..-+..|.++++|+|+..|.. |..-
T Consensus 140 n~lvlP~~~~Vr~~vtS~D--ViHsf~vP~lg~K----~D---------aiPGr~n~~~~~~~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED--VLHSWAVPSLGLK----TD---------AIPGRLNQTTLMSSRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEESS--SCEEEEEGGGTEE----EE---------ECTTCCEEEEECCSSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeCc--ccceeeecccCcE----EE---------ecCCceEEEEEecCCcEEEEEEehhhccccc
Confidence 5799999999999999974 4444444333322 34 3468888889999999999999974 3222
Q ss_pred CCCceeEEEEeCC
Q psy978 154 GDGSFGAFIIRKP 166 (695)
Q Consensus 154 ~~Gl~G~lIV~~~ 166 (695)
..|.+.+.+.++
T Consensus 205 -s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 -SFMPIVLELVPL 216 (227)
T ss_dssp -GGCCEEEEEECH
T ss_pred -ccCeEEEEEEcH
Confidence 246677776653
No 145
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=37.42 E-value=38 Score=28.13 Aligned_cols=68 Identities=16% Similarity=0.273 Sum_probs=35.9
Q ss_pred EecCcEEEEEEEeCCCCCccEEEEEcC--cceeEecCCCCccceeEEeEEEEcCCceEEEEEEc--CCCCcceEEEEee
Q psy978 241 VKQGHSYRFRIINAGYLNCPIELSIAN--HTLTAINSDGGDIKPISVGSIVSYAGERWDFILNA--THHVGNYWIKMRG 315 (695)
Q Consensus 241 v~~G~~~rlRliNa~~~~~~~~~~i~g--h~~~Via~DG~~v~p~~~d~l~l~pGeR~dVlv~a--~~~~g~Y~Ir~~~ 315 (695)
-+||++++||++-......+. .+ -.++|..-+|..+.-.. +.......+..-+.. +...|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~p~----~~~~~~v~l~dp~g~~v~~~~---~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFHPL----NELIPLVYIQDPKGNRIAQWQ---SFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGCBC----CCEEEEEEEECTTSCEEEEEE---EEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCcCC----CCCceEEEEECCCCCEEEEEE---eecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 478999999987553221121 11 14566666676443211 111222334444444 4456899888753
No 146
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=37.40 E-value=1.2e+02 Score=26.30 Aligned_cols=74 Identities=11% Similarity=0.112 Sum_probs=45.2
Q ss_pred eEEEEEEcCCCCCCeEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCC---ccccCCCCCCeEEEEEEcC-
Q psy978 63 KRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPH---LTQCPVPPRSTFRYKFNAD- 138 (695)
Q Consensus 63 ~~~~~~iNG~~PGP~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~---vtqcpI~PG~~~tY~f~~~- 138 (695)
...+...|-+-=.=+|+...|.+..+.|.+..+ + ..| -|+||-.+ +.+-.|+||++.+|++..+
T Consensus 21 ~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G-~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 21 KFNMSLKNQSERAIEFQFSTGQKFELVVYDSEH-K---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKE 88 (120)
T ss_dssp EEEEEEEECSSSCEEEEESSSCCEEEEEECTTC-C---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESS
T ss_pred EEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCC-C---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCC
Confidence 334444443332346667777777777776532 1 222 15776542 2334589999999999986
Q ss_pred --CCeeeEEEcc
Q psy978 139 --SPGTHFWHSH 148 (695)
Q Consensus 139 --~~GT~wYHsH 148 (695)
.+|+|..+.-
T Consensus 89 ~~~pG~Ytl~a~ 100 (120)
T 3isy_A 89 VPEPGTYEVKVT 100 (120)
T ss_dssp CCCSEEEEEEEE
T ss_pred CCCCccEEEEEE
Confidence 4899987754
No 147
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=35.89 E-value=22 Score=37.29 Aligned_cols=41 Identities=15% Similarity=0.316 Sum_probs=28.4
Q ss_pred CCCCCCccccCCCCCCeEEEEEEc--CCCeeeEEEccccCcCCCC
Q psy978 114 MDGVPHLTQCPVPPRSTFRYKFNA--DSPGTHFWHSHTGSQRGDG 156 (695)
Q Consensus 114 ~DG~p~vtqcpI~PG~~~tY~f~~--~~~GT~wYHsH~~~q~~~G 156 (695)
+.|.|....-.|..|..+.|+..+ ..+|+ ||-|...++.++
T Consensus 101 ing~p~~~s~~l~~G~~Y~fki~lkaR~PG~--~HVH~~lNV~~~ 143 (419)
T 3rfr_A 101 IGEQFAPRSVSLEIGKDYAFSINLRGRRAGR--WHVHAQINVEGG 143 (419)
T ss_dssp ETTEECSSCBCCCTTCEEEEEEEEEECSCEE--EEEEEEEEETTT
T ss_pred hcCcCCcceEEecCCCeEeEEEEEecccCcc--cccceeEeeccC
Confidence 334443333469999998888876 68999 588877666653
No 148
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=35.73 E-value=44 Score=28.93 Aligned_cols=36 Identities=11% Similarity=0.225 Sum_probs=29.4
Q ss_pred EEEEcCCCeeeEEEccccCcCCCCceeEE-EEeCCCC
Q psy978 133 YKFNADSPGTHFWHSHTGSQRGDGSFGAF-IIRKPRP 168 (695)
Q Consensus 133 Y~f~~~~~GT~wYHsH~~~q~~~Gl~G~l-IV~~~~~ 168 (695)
..|+++.+|++||-|-...+=..||..++ .|..+..
T Consensus 72 ~~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 72 VKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp EEEECCSCEEEEEECCSTTTTTTTCEEEEEEECC---
T ss_pred eEEEECCCCCEEEECCCCCccccCCEEEEEEECCCCC
Confidence 56788999999999999888888999999 8876443
No 149
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=34.10 E-value=80 Score=32.11 Aligned_cols=76 Identities=18% Similarity=0.253 Sum_probs=52.4
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
.+.+.+|.|+.|.+.+.+.+ ..|-|.+=.... ..| +-||
T Consensus 188 dN~lvlP~g~~V~~~ltS~D----ViHsf~iP~lg~----------------------------------k~d---aiPG 226 (298)
T 3hb3_B 188 DNPVVVPVGKKVLVQVTATD----VIHAWTIPAFAV----------------------------------KQD---AVPG 226 (298)
T ss_dssp SSCEEEESSSEEEEEEEESS----SCEEEEEGGGTE----------------------------------EEE---ECTT
T ss_pred cceEEEEcCCEEEEEEEeCC----ccceeeEcccCc----------------------------------eEE---ecCC
Confidence 45699999999999999865 456554422211 122 2345
Q ss_pred CEEEEEEEecCceeeEEeecchh-hhhcCceEEEEecc
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEF-HVETGMALVFKVGE 589 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~-H~~~GM~~v~~V~~ 589 (695)
-...+.|.++.||.+...|.-.- .-...|-..++|..
T Consensus 227 ~~n~~~~~~~~~G~y~g~CsE~CG~~Hs~M~~~v~vvs 264 (298)
T 3hb3_B 227 RIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAVS 264 (298)
T ss_dssp CCEEEEEECSSSEEEEECCCSCCSTTTTSCCEEEEEEC
T ss_pred ceEEEEEEeCCCEEEEEEcccccCcCccCCeeEEEEEc
Confidence 66789999999999999998542 33456777777754
No 150
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=32.36 E-value=54 Score=28.81 Aligned_cols=69 Identities=22% Similarity=0.277 Sum_probs=36.0
Q ss_pred EEEcCCCCCCeEEEEeCCEEEEEEe---eCCCCCCceEee----CCCccC-CCCCCCCCCCccccCCCCCCeEEEEEEc
Q psy978 67 TVVNRQLPGPAVDVCVGDHVIVNLH---NGLMEESTSIHW----HGHHQV-DSPYMDGVPHLTQCPVPPRSTFRYKFNA 137 (695)
Q Consensus 67 ~~iNG~~PGP~I~v~~GD~v~V~v~---N~l~~~~~siH~----HGl~~~-~~~~~DG~p~vtqcpI~PG~~~tY~f~~ 137 (695)
+.|+|= +.+.=.+.+|..+.|.+. |.- ........ .|+..+ ..+..|+=..-+.|||.+|+.++|.+.+
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~-~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQ-SQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSC-BSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccc-cceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEe
Confidence 345541 234445567777666664 221 12222222 233321 1122454433358999999999998765
No 151
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=28.11 E-value=54 Score=28.38 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=27.9
Q ss_pred EEEecCceeeEEeecchhhhhcCceEEE-EeccCC
Q psy978 558 RFHATNPGYWLFHCHIEFHVETGMALVF-KVGEHE 591 (695)
Q Consensus 558 RF~AdNPG~Wl~HCHi~~H~~~GM~~v~-~V~~~~ 591 (695)
+|..+.+|...|=|=...|=..||-+.+ .|....
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 4556889999999999999999999999 776543
No 152
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=27.75 E-value=1.1e+02 Score=29.35 Aligned_cols=74 Identities=18% Similarity=0.182 Sum_probs=49.8
Q ss_pred eeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCCC
Q psy978 474 NVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGG 553 (695)
Q Consensus 474 ~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~G 553 (695)
+.+.+|.|+.|.+.|.+.+ ..|- |+|-+ .|. ..| +-||-
T Consensus 41 n~l~lP~g~~V~~~lTS~D----ViHS-------F~IP~---lgv------------------------K~d---aiPGr 79 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS----VMHS-------FFIPR---LGS------------------------QIY---AMAGM 79 (205)
T ss_dssp SEEEEETTSCEEEEEEESS----SCEE-------EEEGG---GTE------------------------EEE---ECTTC
T ss_pred ceEEEeCCCEEEEEEecCC----ceee-------EEecc---cCc------------------------EEE---ecCCc
Confidence 4589999999999999875 3454 45421 110 111 23466
Q ss_pred EEEEEEEecCceeeEEeecchhhh-hcCceEEEEec
Q psy978 554 FTIIRFHATNPGYWLFHCHIEFHV-ETGMALVFKVG 588 (695)
Q Consensus 554 ~~vIRF~AdNPG~Wl~HCHi~~H~-~~GM~~v~~V~ 588 (695)
...+.|.++.||.+...|--.-.. ...|-..++|.
T Consensus 80 ~n~l~~~~~~pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 80 QTRLHLIANEPGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp CEEEEECCSSSEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred eEEEEEEeCCCeEEEEEcccccccchhhceEEEEEE
Confidence 678899999999999999755433 23576777765
No 153
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=24.69 E-value=1.2e+02 Score=31.47 Aligned_cols=60 Identities=8% Similarity=0.045 Sum_probs=0.0
Q ss_pred eEEE----EeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCC-----------------------------Ccccc
Q psy978 77 AVDV----CVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP-----------------------------HLTQC 123 (695)
Q Consensus 77 ~I~v----~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p-----------------------------~vtqc 123 (695)
.|.+ ...-.|.++|+|.....-.-++|+ . .|+.| +++
T Consensus 27 ~Ls~~~~~~~~~~vk~tvtN~g~~~~~lLk~~-~-------lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~-- 96 (343)
T 2x3c_A 27 QLTLVDGSTDDVRVNLTLTNTGDKPIRLLKWQ-L-------PGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQL-- 96 (343)
T ss_dssp EEEECCCSSSCCEEEEEEEECSSSCEEEEGGG-S-------CSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEE--
T ss_pred EEEecccCCCCeEEEEEEEeCCCCceEeeccC-C-------CCcCccceEEEEeCCcccceeeEEEeccCCChhhcEE--
Q ss_pred CCCCCCeEEEEEEc------CCCeeeEEEc
Q psy978 124 PVPPRSTFRYKFNA------DSPGTHFWHS 147 (695)
Q Consensus 124 pI~PG~~~tY~f~~------~~~GT~wYHs 147 (695)
|+||++.+.+|.+ .+.|+|-++.
T Consensus 97 -L~pG~Sve~~~dla~~ydLs~gG~y~v~~ 125 (343)
T 2x3c_A 97 -LKAGQSLTVQAEVSGLYDMSAQGQYSIRY 125 (343)
T ss_dssp -ECTTCEEEEEEECTTTBTCCSCEEEEEEE
T ss_pred -eCCCCeEEEEEehhhccccCCCceEEEEE
No 154
>1gui_A Laminarinase 16A; carbohydrate binding module, CBM, glucan, cellulose; HET: BGC; 1.9A {Thermotoga maritima} SCOP: b.18.1.14
Probab=24.25 E-value=3.6e+02 Score=23.61 Aligned_cols=59 Identities=12% Similarity=0.153 Sum_probs=33.4
Q ss_pred eEEEecCcEEEEEEEeCCCCCccEEEEEcCcceeEecCCCCccceeEEeEEEEcC-CceEEEEEEcCC
Q psy978 238 VFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYA-GERWDFILNATH 304 (695)
Q Consensus 238 ~~~v~~G~~~rlRliNa~~~~~~~~~~i~gh~~~Via~DG~~v~p~~~d~l~l~p-GeR~dVlv~a~~ 304 (695)
.+.+++|++|+|.+--.+.....+.+.|.. .+.....+...++.+.. =++|++.+++..
T Consensus 66 ~i~l~~G~~Y~lsf~aka~~~~~i~v~l~~--------~~~~~~~~~~~~~~lt~~w~~~~~~ft~~~ 125 (155)
T 1gui_A 66 WIGLYRGKTYTISFKAKADTPRPINVKILQ--------NHDPWTNYFAQTVNLTADWQTFTFTYTHPD 125 (155)
T ss_dssp EEECCTTCEEEEEEEEEESSCEEEEEEEEC--------SSTTCCEEEEEEEEECSSCEEEEEEEECCT
T ss_pred cEEeCCCCEEEEEEEEEeCCCCcEEEEEEc--------CCCChHHheeccEeeCCCCEEEEEEEEcCC
Confidence 478899999998886665443334443322 22222333334455555 356777777664
No 155
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=23.92 E-value=52 Score=28.76 Aligned_cols=27 Identities=15% Similarity=0.448 Sum_probs=20.8
Q ss_pred eEEEEeC-CEEEEEEeeCCCCCCceE--eeC
Q psy978 77 AVDVCVG-DHVIVNLHNGLMEESTSI--HWH 104 (695)
Q Consensus 77 ~I~v~~G-D~v~V~v~N~l~~~~~si--H~H 104 (695)
.|++++| .++.|+|.|.. +++.-+ |+|
T Consensus 18 ~I~lN~gr~~~~l~V~NtG-DRPIQVGSHyH 47 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTG-DRPIQVGSHIH 47 (126)
T ss_dssp EEETTTTSCEEEEEEEECS-SSCEEEETTSC
T ss_pred CEEeCCCCcEEEEEEEeCC-CCCEEEccccc
Confidence 4777777 58999999996 688766 555
No 156
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=23.92 E-value=52 Score=28.76 Aligned_cols=27 Identities=15% Similarity=0.448 Sum_probs=20.8
Q ss_pred eEEEEeC-CEEEEEEeeCCCCCCceE--eeC
Q psy978 77 AVDVCVG-DHVIVNLHNGLMEESTSI--HWH 104 (695)
Q Consensus 77 ~I~v~~G-D~v~V~v~N~l~~~~~si--H~H 104 (695)
.|++++| .++.|+|.|.. +++.-+ |+|
T Consensus 18 ~I~lN~gr~~~~l~V~NtG-DRPIQVGSHyH 47 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTG-DRPIQVGSHIH 47 (126)
T ss_dssp EEETTTTSCEEEEEEEECS-SSCEEEETTSC
T ss_pred CEEeCCCCcEEEEEEEeCC-CCCEEEccccc
Confidence 4777777 58999999996 688766 555
No 157
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=22.84 E-value=49 Score=33.98 Aligned_cols=73 Identities=14% Similarity=-0.014 Sum_probs=50.4
Q ss_pred eEEEEeCCEEEEEEeeCCCCCCceEeeCCCccCCCCCCCCCCCccccCCCCCCeEEEEEEcCCCeeeEEEccc-cCcCCC
Q psy978 77 AVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHT-GSQRGD 155 (695)
Q Consensus 77 ~I~v~~GD~v~V~v~N~l~~~~~siH~HGl~~~~~~~~DG~p~vtqcpI~PG~~~tY~f~~~~~GT~wYHsH~-~~q~~~ 155 (695)
.|.+..|..|++.++... .-++.....+..+ +| +-||..-+..|.++++|+|+..|.. -...-.
T Consensus 152 ~l~lP~g~~V~~~lTS~D--ViHsf~IP~lg~k----~D---------aiPGr~n~~~~~~~~~G~y~g~CsE~CG~~Hs 216 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNS--VMNSFFIPRLGSQ----IY---------AMAGMQTRLHLIANEPGTYDGISASYSGPGFS 216 (315)
T ss_dssp BCCCCSSSEEEEEECBSS--SCEEEEEGGGTEE----EE---------ECBTSCEEEEEECCSCBCCEEBCCSCCSTTTT
T ss_pred eEEEeCCCEEEEEEEeCC--ccceeeecccCcE----Ee---------ecCCcceeeEEecCCCeEEEEeccccchhhHH
Confidence 577889999999998874 4444443333221 34 4578888899999999999999973 222223
Q ss_pred CceeEEEEe
Q psy978 156 GSFGAFIIR 164 (695)
Q Consensus 156 Gl~G~lIV~ 164 (695)
.|.+.++|.
T Consensus 217 ~M~~~v~vv 225 (315)
T 1fft_B 217 GMKFKAIAT 225 (315)
T ss_dssp TCCEECCBC
T ss_pred hccceEEEe
Confidence 577777776
No 158
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=22.52 E-value=77 Score=27.04 Aligned_cols=45 Identities=11% Similarity=0.109 Sum_probs=0.0
Q ss_pred CCCCCCeEEEEEEcCCCeeeEEEccccCcCCCCceeEEEEeCCCC
Q psy978 124 PVPPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRP 168 (695)
Q Consensus 124 pI~PG~~~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~lIV~~~~~ 168 (695)
||....+=...|+++.+|++||-|-...+=..||..++.|.....
T Consensus 63 p~~~~~~G~~~v~L~~~G~~yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 63 PAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp CSEEECSSEEEEECCSSEEEEEECCSTTTTTTTCEEEEEECC---
T ss_pred cccccCCCCEEEEECCCcCEEEECCCCCcccCCCEEEEEEcCCCC
No 159
>4gio_A Putative lipoprotein; unknown function; 1.90A {Campylobacter jejuni subsp}
Probab=21.77 E-value=3.6e+02 Score=22.70 Aligned_cols=68 Identities=15% Similarity=0.233 Sum_probs=0.0
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
........+...+..+.+.. .++.+|| |.|+-. |++|..-.....-+|| ++.|+++
T Consensus 27 ~~~~~~~~nG~l~v~v~~~s-----~~~~~l~-Yrf~Wy-----------------D~~G~~v~~~~~~~W~-~~~l~g~ 82 (107)
T 4gio_A 27 QFQKRINSNGYLEFEVILRS-----TFAKDVI-YKVDWL-----------------DKDGFVLRDVLNEDYQ-ALRIPAG 82 (107)
T ss_dssp EEEEEECTTSCEEEEEEECC-----SSCEEEE-EEEEEE-----------------CTTSCBCCSSCCCCCE-EEEECTT
T ss_pred ccceEEccCCEEEEEEEecC-----CCceEEE-EEEEEE-----------------CCCCCCcCCCCCCCCE-EEEEcCC
Q ss_pred CEEEEEEEecCc
Q psy978 553 GFTIIRFHATNP 564 (695)
Q Consensus 553 G~~vIRF~AdNP 564 (695)
+-+.|...|-||
T Consensus 83 ~~~~i~~vap~~ 94 (107)
T 4gio_A 83 QEVILRKLASDT 94 (107)
T ss_dssp CCEEEEEECSST
T ss_pred CeEEEEEECCCC
No 160
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=20.90 E-value=48 Score=29.14 Aligned_cols=17 Identities=18% Similarity=0.518 Sum_probs=15.3
Q ss_pred cccCCCCCCeEEEEEEc
Q psy978 121 TQCPVPPRSTFRYKFNA 137 (695)
Q Consensus 121 tqcpI~PG~~~tY~f~~ 137 (695)
+.|||.+|+.++|.+..
T Consensus 76 ~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 76 MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp SCSSBCTTCEEEEEEEE
T ss_pred ccCcccCCEEEEEEEEe
Confidence 68999999999999765
No 161
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=20.71 E-value=1.8e+02 Score=28.81 Aligned_cols=76 Identities=17% Similarity=0.289 Sum_probs=50.4
Q ss_pred ceeeeeCCCCEEEEEEEeCCCCCCCCCceeecCCCeEEEEEcccCccccccchhcccccccccCCCCCCCccceeEeCCC
Q psy978 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDG 552 (695)
Q Consensus 473 ~~~~~v~~g~vVeivl~N~~~~~~~~HPfHLHG~~F~Vv~~g~~g~~~~~~~~~~~~~~g~~~~n~~~P~~rDTv~Vp~~ 552 (695)
.+.+.+|.|+.|.+.+.+.+ ..|-|-+=.... ..| +-||
T Consensus 170 dn~l~lP~g~~v~~~~tS~D----ViHsf~ip~l~~----------------------------------k~d---a~PG 208 (262)
T 2gsm_B 170 DTAMVVPVNKTVVVQVTGAD----VIHSWTVPAFGV----------------------------------KQD---AVPG 208 (262)
T ss_dssp SSCEEEETTSEEEEEEEESS----SCEEEEEGGGTE----------------------------------EEE---ECBT
T ss_pred cceEEEecCCEEEEEEEECc----ccceeeecccCc----------------------------------eEE---ecCC
Confidence 45689999999999999875 345544332211 122 2235
Q ss_pred CEEEEEEEecCceeeEEeecchhhh-hcCceEEEEecc
Q psy978 553 GFTIIRFHATNPGYWLFHCHIEFHV-ETGMALVFKVGE 589 (695)
Q Consensus 553 G~~vIRF~AdNPG~Wl~HCHi~~H~-~~GM~~v~~V~~ 589 (695)
-...+.|.++.||.+...|--.--. ...|-..++|..
T Consensus 209 ~~n~~~~~~~~~G~y~g~Cse~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 209 RLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVVS 246 (262)
T ss_dssp CCEEEEEECCSCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred ceeEEEEecCCcEEEEEEChHhcccCcccCeEEEEEEc
Confidence 5667899999999999999754322 235666666653
Done!