RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy978
(695 letters)
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 168
Score = 131 bits (331), Expect = 3e-36
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 15/183 (8%)
Query: 176 YDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTP 235
YD D ++ I DW H L +F + A P T L+NG GR +A +
Sbjct: 1 YDVDDASTVITIADWYHSLSTVLFPNPNKAPP--APDTTLINGLGRN-----SANPSAGQ 53
Query: 236 MEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGER 295
+ V +V+ G YRFRI++ SI H +T I DG +P++V S+ +AG+R
Sbjct: 54 LAVVSVQSGKRYRFRIVSTS-CFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQR 112
Query: 296 WDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATRTSG 355
+ ++ A VGNYWI+ + FT +A+ RY+GA P ++ SG
Sbjct: 113 YSVVVEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGAAVAEPT------TSQNSG 165
Query: 356 TVL 358
T L
Sbjct: 166 TAL 168
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 170
Score = 130 bits (327), Expect = 1e-35
Identities = 61/190 (32%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 172 HAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATV 231
HA YD D ++ +TDW H A L+NG GR A+
Sbjct: 3 HASRYDVDNESTVITLTDWYHT------AARLGPRFPLGADATLINGLGRS------AST 50
Query: 232 TYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSY 291
+ V V+ G YRFR+++ + SI H LT I DG + +P+ V SI +
Sbjct: 51 PTAALAVINVQHGKRYRFRLVSIS-CDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIF 109
Query: 292 AGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDAT 351
A +R+ F+LNA VGNYWI+ F +A+LRY+GAP P T
Sbjct: 110 AAQRYSFVLNANQTVGNYWIRANPNFGTVG-FAGGINSAILRYQGAPVAEP--------T 160
Query: 352 RTSGTVLNPL 361
T T + PL
Sbjct: 161 TTQTTSVIPL 170
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 172
Score = 127 bits (320), Expect = 1e-34
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 172 HAPLYDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATV 231
HA LYD D I+ + DW H+ G +P L+NGKGR+
Sbjct: 2 HAALYDEDDENTIITLADWYHI-------PAPSIQGAAQPDATLINGKGRY------VGG 48
Query: 232 TYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSY 291
+ + V+QG YR R+I+ + + SI H LT I DG +P +V + +
Sbjct: 49 PAAELSIVNVEQGKKYRMRLISLS-CDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIF 107
Query: 292 AGERWDFILNATHHVGNYWIKMR---GLMDCDERFTSAYQTAVLRYEGAPDESPA 343
G+R+ F+L+A V NYWI+ + G F + +A+LRY GA + P
Sbjct: 108 TGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPT 162
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 181
Score = 126 bits (318), Expect = 3e-34
Identities = 42/189 (22%), Positives = 75/189 (39%), Gaps = 13/189 (6%)
Query: 176 YDFDLPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTP 235
YD DL + ITD+ + ++ + + +L+NG N
Sbjct: 1 YDIDL--GVFPITDYYYRAADDLVHFTQNN-APPFSDNVLINGTAV------NPNTGEGQ 51
Query: 236 MEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGER 295
T+ G +R RI+N ++S+ NHT+T I +D + ++V S+ G+R
Sbjct: 52 YANVTLTPGKRHRLRILNTS-TENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQR 110
Query: 296 WDFILNATHHVGNYWIKMRGLMDCDER-FTSAYQTAVLRYEGAPDESPA--GEVDYDATR 352
+D +++A+ NYW + + + A+ Y GAP P G D
Sbjct: 111 YDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQC 170
Query: 353 TSGTVLNPL 361
+ P+
Sbjct: 171 LDTLDVRPV 179
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 130
Score = 120 bits (302), Expect = 1e-32
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 57 IPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGL----MEESTSIHWHGHHQVDSP 112
+ DG R VVN P P + GD +N+ + L M +STSIHWHG Q +
Sbjct: 15 VSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTN 74
Query: 113 YMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPR 167
+ DG + QCP+ +F Y F+ D GT ++HSH +Q DG G F++ P+
Sbjct: 75 WADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130
Score = 28.1 bits (62), Expect = 1.7
Identities = 7/44 (15%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 540 DAPLKDTVTVPDGGFTIIRFHATN-PGYWLFHCHIEFHVETGMA 582
+ + G + FH + G + +H H+ G+
Sbjct: 78 GPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLR 121
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita
pepo var. medullosa) [TaxId: 3663]}
Length = 214
Score = 123 bits (308), Expect = 1e-32
Identities = 55/189 (29%), Positives = 77/189 (40%), Gaps = 25/189 (13%)
Query: 432 LNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSY-----------CECTNVVNVPL 480
+N +S P P L F N + + Y V +
Sbjct: 26 INDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKI 85
Query: 481 ESVVELIIIDEGVAY---DANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRN 537
VV++I+ + + HP+HLHGH F V+ A+ N
Sbjct: 86 GEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGY----------GDGKFSAEEESSLN 135
Query: 538 LKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEHEDMAPVP 597
LK+ PL++TV + G+T IRF A NPG W FHCHIE H+ GM +VF G E + +P
Sbjct: 136 LKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV-EKVGRIP 194
Query: 598 KDFPTCGDY 606
CG
Sbjct: 195 TKALACGGT 203
Score = 31.8 bits (71), Expect = 0.22
Identities = 17/74 (22%), Positives = 24/74 (32%), Gaps = 14/74 (18%)
Query: 89 NLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLT--------------QCPVPPRSTFRYK 134
N+ + E+ H HGH Y DG + P +
Sbjct: 97 NMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIR 156
Query: 135 FNADSPGTHFWHSH 148
F AD+PG +H H
Sbjct: 157 FVADNPGVWAFHCH 170
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 131
Score = 117 bits (294), Expect = 1e-31
Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 57 IPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLME----ESTSIHWHGHHQVDSP 112
+ DG RA +VN GP + D+ +N+ N L TSIHWHG Q +
Sbjct: 16 VSPDGFTRAGILVNGV-HGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTN 74
Query: 113 YMDGVPHLTQCPVPPRSTFRYKFN-ADSPGTHFWHSHTGSQRGDGSFGAFIIRKP 166
+ DG + QCP+ P F YKF A GT ++HSH G+Q DG G +I
Sbjct: 75 WADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDD 129
Score = 28.4 bits (63), Expect = 1.4
Identities = 8/43 (18%), Positives = 14/43 (32%)
Query: 550 PDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEHED 592
P F A + G + +H H G+ + + D
Sbjct: 89 PGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND 131
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 136
Score = 115 bits (288), Expect = 9e-31
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 57 IPADGV-KRAITVVNRQLPGPAVDVCVGDHVIVNLHN----GLMEESTSIHWHGHHQVDS 111
+ DG R+ P + + D +N+ + M +TSIHWHG Q +
Sbjct: 14 LDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGT 73
Query: 112 PYMDGVPHLTQCPVPPRSTFRYKFNA-DSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPRE 170
MDG + QCP+ P +F Y F GT+++HSH +Q DG GAF++ P +
Sbjct: 74 TEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYD--PND 131
Query: 171 VHAPL 175
H L
Sbjct: 132 PHLSL 136
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita
pepo var. medullosa) [TaxId: 3663]}
Length = 129
Score = 113 bits (283), Expect = 3e-30
Identities = 43/111 (38%), Positives = 62/111 (55%)
Query: 60 DGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPH 119
+ + + +N Q PGP + GD V+V L N L E IHWHG Q +P+ DG
Sbjct: 18 NCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTAS 77
Query: 120 LTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPRE 170
++QC + P TF Y F D+PGT F+H H G QR G +G+ I+ P+ ++
Sbjct: 78 ISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKK 128
Score = 30.0 bits (67), Expect = 0.38
Identities = 9/43 (20%), Positives = 14/43 (32%)
Query: 545 DTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587
+ G F NPG + +H H+ G+ V
Sbjct: 79 SQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIV 121
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 216
Score = 110 bits (276), Expect = 3e-28
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 476 VNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIR 535
V+ + LI D + HP HLHGH F V+ ++Q + A L R
Sbjct: 65 VDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLAR 124
Query: 536 RNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVF-----KVGEH 590
N + P +DT +P GG+ ++ F NPG WLFHCHI +HV G+++ F + +
Sbjct: 125 LNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQR 184
Query: 591 EDMAPVPKDFPTCGDY 606
C ++
Sbjct: 185 ISQEDEDDFNRVCDEW 200
Score = 36.4 bits (83), Expect = 0.005
Identities = 24/133 (18%), Positives = 37/133 (27%), Gaps = 27/133 (20%)
Query: 82 VGDHVIVNLHNGLMEESTSIHWHGHH-----------------QVDSPYMDGVPHLTQCP 124
+I N G +H HGH V P +D P
Sbjct: 71 WTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNP 130
Query: 125 -------VPPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYD 177
+P F D+PG +H H G F+ RP ++ +
Sbjct: 131 PRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLE---RPADLRQRISQ 187
Query: 178 FDLPEHIMLITDW 190
D + + +W
Sbjct: 188 EDEDDFNRVCDEW 200
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 162
Score = 106 bits (266), Expect = 2e-27
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 5/161 (3%)
Query: 14 QRECIEGDTRTCT---YDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGV-KRAITVV 69
+ C R C +D + ++ + + + + DGV K + ++
Sbjct: 1 EPTCNTPSNRACWSDGFDINTDYEVSTPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLI 60
Query: 70 NRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQC-PVPPR 128
N + GP + GD V V + N L+ TSIHWHG HQ D+ DG +T+C P
Sbjct: 61 NGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKG 120
Query: 129 STFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPR 169
Y++ A GT ++HSH +Q G+G G I P
Sbjct: 121 GQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPASL 161
Score = 35.5 bits (81), Expect = 0.008
Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Query: 549 VPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEHEDMAPVP 597
P GG R+ A G +H H G+ ++ A +P
Sbjct: 117 PPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQI---NGPASLP 162
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 199
Score = 104 bits (259), Expect = 3e-26
Identities = 59/181 (32%), Positives = 77/181 (42%), Gaps = 34/181 (18%)
Query: 432 LNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDE 491
+N+ SF PT P+L Q L+ + A +V +P S +E+ +
Sbjct: 39 INNASFTPPTVPVLLQ-----------ILSGAQTAQDLLPAGSVYPLPAHSTIEITLPAT 87
Query: 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKD---TVT 548
+A A HPFHLHGH F VV G N D +D T T
Sbjct: 88 ALAPGAPHPFHLHGHAFAVVRSA-----------------GSTTYNYNDPIFRDVVSTGT 130
Query: 549 VPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVF--KVGEHEDMAPVPKDFP-TCGD 605
G IRF NPG W HCHI+FH+E G A+VF V + + PVPK + C
Sbjct: 131 PAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADVKAANPVPKAWSDLCPI 190
Query: 606 Y 606
Y
Sbjct: 191 Y 191
Score = 36.4 bits (83), Expect = 0.005
Identities = 14/104 (13%), Positives = 22/104 (21%), Gaps = 10/104 (9%)
Query: 86 VIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCP----------VPPRSTFRYKF 135
+ + H HGH + P +F
Sbjct: 82 ITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRF 141
Query: 136 NADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFD 179
D+PG F H H G F + + +
Sbjct: 142 QTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADVKAANPVPKAWS 185
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita
pepo var. medullosa) [TaxId: 3663]}
Length = 209
Score = 104 bits (259), Expect = 5e-26
Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 17/180 (9%)
Query: 176 YDFDLPEHIMLITDWSH--VLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSN----- 228
+ +D E +L++DW H + E+ + +P TIL+NG+G+F +
Sbjct: 2 FHYD-GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSN 60
Query: 229 ------ATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKP 282
+F V +YR RI + + +I NH L + +DG ++P
Sbjct: 61 LEPCKLKGSESCAPYIFHVSPKKTYRIRIASTT-ALAALNFAIGNHQLLVVEADGNYVQP 119
Query: 283 ISVGSIVSYAGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESP 342
I Y+GE + ++ + + G + +L Y
Sbjct: 120 FYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARH--PNTPPGLTLLNYLPNSVSKL 177
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 200
Score = 101 bits (251), Expect = 4e-25
Identities = 51/179 (28%), Positives = 74/179 (41%), Gaps = 34/179 (18%)
Query: 432 LNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDE 491
+N ++ P+ P L Q ++ + A+ +V +P VVEL++
Sbjct: 39 INGTAYESPSVPTLLQ-----------IMSGAQSANDLLPAGSVYELPRNQVVELVVPAG 87
Query: 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVP- 550
+ HPFHLHGH F VV G N + +D V++
Sbjct: 88 VLGG--PHPFHLHGHAFSVVRSA-----------------GSSTYNFVNPVKRDVVSLGV 128
Query: 551 DGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVF--KVGEHEDMAPVPKDF-PTCGDY 606
G IRF NPG W FHCHIEFH+ G+A+VF + D P ++ C Y
Sbjct: 129 TGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIY 187
Score = 34.0 bits (77), Expect = 0.030
Identities = 18/105 (17%), Positives = 31/105 (29%), Gaps = 8/105 (7%)
Query: 83 GDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPV--------PPRSTFRYK 134
V + + G++ H HGH + PV +
Sbjct: 77 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIR 136
Query: 135 FNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFD 179
F D+PG F+H H +G F + + P ++
Sbjct: 137 FVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWA 181
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus
subtilis [TaxId: 1423]}
Length = 154
Score = 97.8 bits (243), Expect = 2e-24
Identities = 22/113 (19%), Positives = 37/113 (32%), Gaps = 4/113 (3%)
Query: 478 VPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRN 537
+ + II+ HP HLH FRV+ ++ +
Sbjct: 45 PKVGTTEIWSIINPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPP 101
Query: 538 LKDAPLKDTVTVPDGGFTIIRFH-ATNPGYWLFHCHIEFHVETGMALVFKVGE 589
+ KDT+ G I G +++HCHI H + M + +
Sbjct: 102 PSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHILEHEDYDMMRPMDITD 154
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria
gonorrhoeae, AniA [TaxId: 485]}
Length = 151
Score = 91.3 bits (226), Expect = 3e-22
Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 11/116 (9%)
Query: 59 ADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP 118
DGV+ + +PG + V GD V V N +S H + G
Sbjct: 41 DDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSN----NPSSTVPHNVDFHAATGQGGGA 96
Query: 119 HLTQCPVPPRSTFRYKFNADSPGTHFWHSH---TGSQRGDGSFGAFII--RKPRPR 169
P T + F A PG + +H G +G +G ++ ++ P+
Sbjct: 97 --AATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPK 150
Score = 36.2 bits (83), Expect = 0.004
Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 8/128 (6%)
Query: 475 VVNVPLESVVELIIIDEGVAYDA---NHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAK 531
V V +E+V + + +D+GV Y + G RV + V + +
Sbjct: 26 KVRVKMETVEKTMKMDDGVEYRYWTFDGDVP--GRMIRVREGDTVEVEFSNNPSSTVPHN 83
Query: 532 GLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCH---IEFHVETGMALVFKVG 588
G + F A PG +++HC + H+ GM + V
Sbjct: 84 VDFHAATGQGGGAAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVE 143
Query: 589 EHEDMAPV 596
E + V
Sbjct: 144 PKEGLPKV 151
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 159
Score = 87.9 bits (217), Expect = 6e-21
Identities = 23/118 (19%), Positives = 35/118 (29%), Gaps = 10/118 (8%)
Query: 57 IPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDG 116
I G N +PGP + V GD+V + L N + H +
Sbjct: 46 IDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT----NAMPHNVEFHGAT--GA 99
Query: 117 VPHLTQCPVPPRSTFRYKFNADSPGTHFWHSH----TGSQRGDGSFGAFIIRKPRPRE 170
+ V P +F AD GT +H G G ++ +
Sbjct: 100 LGGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLK 157
Score = 33.9 bits (77), Expect = 0.026
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 548 TVPDGGFTIIRFHATNPGYWLFHCH----IEFHVETGMA 582
V G +RF A G +++HC + +HV +GM+
Sbjct: 107 NVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMS 145
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 190
Score = 87.6 bits (216), Expect = 2e-20
Identities = 50/179 (27%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 432 LNHLSFRFPTFPLLSQRDQIDESTFCSNLTTDRCADSYCECTNVVNVPLESVVELIIIDE 491
+N F PT P+L Q L+ + V+++P V+E+ I
Sbjct: 41 INGAPFIPPTVPVLLQ-----------ILSGVTNPNDLLPGGAVISLPANQVIEISIPGG 89
Query: 492 GVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPD 551
G NHPFHLHGH F VV G N + +D V++
Sbjct: 90 G-----NHPFHLHGHNFDVVRTP-----------------GSSVYNYVNPVRRDVVSIGG 127
Query: 552 GGFT-IIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEHE--DMAPVPKDF-PTCGDY 606
GG RF NPG W HCHI++H+E G+A+VF + + C Y
Sbjct: 128 GGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDDLCPKY 186
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 157
Score = 84.0 bits (207), Expect = 1e-19
Identities = 25/118 (21%), Positives = 38/118 (32%), Gaps = 13/118 (11%)
Query: 57 IPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDG 116
I +G + N +PGP + V D+V + L N T+ H +
Sbjct: 45 IDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD----TNTLLHNIDFHAATGAL- 99
Query: 117 VPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGS----QRGDGSFGAFIIRKPRPRE 170
V P +F A PG +H G GA ++ PR+
Sbjct: 100 -GGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV---LPRD 153
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 192
Score = 80.2 bits (197), Expect = 6e-18
Identities = 26/114 (22%), Positives = 32/114 (28%), Gaps = 19/114 (16%)
Query: 73 LPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDS----PYMDGVPH--LTQCPVP 126
GP + GD V V+L N + H HG Y D V
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLAS-RPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVY 131
Query: 127 PRSTFRYKFNAD----------SPGTHFWHSH--TGSQRGDGSFGAFIIRKPRP 168
P + Y A + T +HSH G G II K
Sbjct: 132 PGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDS 185
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 140
Score = 78.6 bits (193), Expect = 6e-18
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 60 DGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPH 119
G N L GPAV + G V V+++N L E T++HWHG +DG P
Sbjct: 30 GGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT-EETTLHWHGLEV--PGEVDGGP- 85
Query: 120 LTQCPVPPRSTFRYKFNADSP-GTHFWHSH----TGSQRGDGSFGAFIIRKPRPREV 171
Q +PP N D P T ++H H TG Q G G +I ++
Sbjct: 86 --QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKL 140
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 153
Score = 77.5 bits (190), Expect = 2e-17
Identities = 23/117 (19%), Positives = 37/117 (31%), Gaps = 14/117 (11%)
Query: 59 ADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVP 118
+ + +PGP + V GD+V + L N + H + G
Sbjct: 45 DEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLIN----PPENTMPHNIDFHAATGALGGG 100
Query: 119 HLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGS-----QRGDGSFGAFIIRKPRPRE 170
LT + P +F A G +H G G G ++ PR+
Sbjct: 101 GLT--LINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMV---LPRD 152
Score = 37.0 bits (85), Expect = 0.002
Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 10/121 (8%)
Query: 475 VVNVPLESVVELIIIDEGVAYDA---NHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAK 531
+ + + + + +DE A + + G V + V + M
Sbjct: 30 INEFEMRIIEKEVQLDEDAYLQAMTFDG--SIPGPLMIVHEGDYVELTLINPPENTMPHN 87
Query: 532 GLIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCH-----IEFHVETGMALVFK 586
+ G ++RF AT G +++HC I +HV +GMA
Sbjct: 88 IDFHAATGALGGGGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIM 147
Query: 587 V 587
V
Sbjct: 148 V 148
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus)
[TaxId: 9913]}
Length = 180
Score = 77.8 bits (191), Expect = 4e-17
Identities = 24/112 (21%), Positives = 38/112 (33%), Gaps = 19/112 (16%)
Query: 73 LPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHH----QVDSPYMDGVPHLTQC--PVP 126
L GP + VGD + V+ N + SIH G + Y D + + V
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVA 115
Query: 127 PRSTFRYKFNAD----------SPGTHFWHSHTGSQR--GDGSFGAFIIRKP 166
P + Y++ TH ++S+ G G +I K
Sbjct: 116 PGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKK 167
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus
subtilis [TaxId: 1423]}
Length = 181
Score = 77.2 bits (189), Expect = 6e-17
Identities = 27/139 (19%), Positives = 38/139 (27%), Gaps = 29/139 (20%)
Query: 57 IPADGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEE------------------- 97
+ D + N PGP ++V ++V V N L
Sbjct: 38 LHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEP 97
Query: 98 --STSIHWHGHHQVDSPYMDGVPHLTQCPVPP---RSTFRYKFNADSPGTHFW-HSH--- 148
T +H HG D ++ Y + G W H H
Sbjct: 98 EVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMA 157
Query: 149 -TGSQRGDGSFGAFIIRKP 166
T G GA+II P
Sbjct: 158 LTRLNVYAGLVGAYIIHDP 176
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 165
Score = 73.5 bits (180), Expect = 6e-16
Identities = 24/170 (14%), Positives = 48/170 (28%), Gaps = 22/170 (12%)
Query: 177 DFDLPEHIMLITDWSHVLGVEMFNAHHHADGDN--KPPTILMNGKGRFKEFRSNATVTYT 234
D+P +++ D ++ T+L NG
Sbjct: 8 IDDVP---VIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYP------------ 52
Query: 235 PMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KPISVGSIVSYAG 293
R R++N + N L I SDGG + +P+ V + G
Sbjct: 53 ----QHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMG 108
Query: 294 ERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPA 343
ER++ ++ + + + V+R + +
Sbjct: 109 ERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASG 158
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 181
Score = 73.6 bits (180), Expect = 1e-15
Identities = 27/113 (23%), Positives = 38/113 (33%), Gaps = 23/113 (20%)
Query: 478 VPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRN 537
+I G HPFH+HG FR+++
Sbjct: 89 AAKGQYERWVISGVGDMM--LHPFHIHGTQFRILSENGK------------------PPA 128
Query: 538 LKDAPLKDTVTVPDGGFTII---RFHATNPGYWLFHCHIEFHVETGMALVFKV 587
A KDTV V ++ A ++ HCH+ H +TGM L F V
Sbjct: 129 AHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 181
Score = 37.3 bits (86), Expect = 0.002
Identities = 12/97 (12%), Positives = 22/97 (22%), Gaps = 9/97 (9%)
Query: 76 PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHH-QVDSPYMDGVPHLTQCP-----VPPRS 129
P G + + H HG ++ S V
Sbjct: 85 PMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGNV 144
Query: 130 TF---RYKFNADSPGTHFWHSHTGSQRGDGSFGAFII 163
+ ++ +A + H H G F +
Sbjct: 145 SEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 181
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId:
920]}
Length = 153
Score = 72.6 bits (177), Expect = 1e-15
Identities = 14/97 (14%), Positives = 25/97 (25%), Gaps = 5/97 (5%)
Query: 73 LPGPAVDVCVGDHVIVNLHN--GLMEESTSIHWHGHH--QVDSPYMDGVPHLTQCPVPPR 128
P +++ G V V N S I G +
Sbjct: 57 KKNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDG 116
Query: 129 STFRYKFN-ADSPGTHFWHSHTGSQRGDGSFGAFIIR 164
F + GT+++ G FG +++
Sbjct: 117 KFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVVK 153
Score = 42.5 bits (99), Expect = 3e-05
Identities = 18/90 (20%), Positives = 22/90 (24%), Gaps = 21/90 (23%)
Query: 499 HPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIR 558
H F + M VID A + DG F
Sbjct: 83 HSFDITKKGPPYAVM----------PVIDPI----------VAGTGFSPVPKDGKFGYTN 122
Query: 559 FH-ATNPGYWLFHCHIEFHVETGMALVFKV 587
F G + + C I H TG V
Sbjct: 123 FTWHPTAGTYYYVCQIPGHAATGQFGKIVV 152
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 207
Score = 74.0 bits (181), Expect = 1e-15
Identities = 22/127 (17%), Positives = 34/127 (26%), Gaps = 23/127 (18%)
Query: 62 VKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQ----------VDS 111
+R + + GP + VGD + V HN SI G +
Sbjct: 72 KERGPEEEHLGILGPVIWAEVGDTIRVTFHNKG-AYPLSIEPIGVRFNKNNEGTYYSPNY 130
Query: 112 PYMDGVPHLTQCPVPPRSTFRYKFNADSPG----------THFWHSHTGSQR--GDGSFG 159
+ V P TF Y++ ++S + G G
Sbjct: 131 NPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIG 190
Query: 160 AFIIRKP 166
I K
Sbjct: 191 PMKICKK 197
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus
subtilis [TaxId: 1423]}
Length = 174
Score = 72.1 bits (176), Expect = 3e-15
Identities = 32/171 (18%), Positives = 58/171 (33%), Gaps = 12/171 (7%)
Query: 174 PLYDFDLPEHIMLITDWSHVL-GVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVT 232
P ++D+P +LITD + G + + + P ++ V
Sbjct: 3 PSDEYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAF-----CGETILVN 54
Query: 233 YTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDI-KPISVGSIVSY 291
V+ YRFR+INA I SDGG + + + + S
Sbjct: 55 GKVWPYLEVE-PRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLA 113
Query: 292 AGERWDFILNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESP 342
ER+D I++ T + G I + C ++++ +
Sbjct: 114 PAERYDIIIDFTAYEGESII-LANSAGCGGDVNPETDANIMQFRVTKPLAQ 163
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos
taurus) [TaxId: 9913]}
Length = 139
Score = 68.3 bits (166), Expect = 3e-14
Identities = 19/100 (19%), Positives = 30/100 (30%), Gaps = 1/100 (1%)
Query: 64 RAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQC 123
+ P + + + V ++L N L H H Q L
Sbjct: 40 EFHAINGMIYNLPGLRMYEQEWVRLHLLN-LGGSRDIHVVHFHGQTLLENGTQQHQLGVW 98
Query: 124 PVPPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFII 163
P+ P S + A PG + G + G F+I
Sbjct: 99 PLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLI 138
Score = 60.2 bits (145), Expect = 2e-11
Identities = 14/92 (15%), Positives = 22/92 (23%), Gaps = 26/92 (28%)
Query: 496 DANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFT 555
H H HG ++ + G F
Sbjct: 73 RDIHVVHFHGQTLLENGTQQ--------------------------HQLGVWPLLPGSFK 106
Query: 556 IIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587
+ A+ PG+WL + GM F +
Sbjct: 107 TLEMKASKPGWWLLDTEVGEIQRAGMQTPFLI 138
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 179
Score = 68.5 bits (167), Expect = 4e-14
Identities = 23/108 (21%), Positives = 32/108 (29%), Gaps = 23/108 (21%)
Query: 73 LPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFR 132
+ GP + VGD V + N SIH HG T P P T
Sbjct: 83 ILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQ---------TESSTVTPTLPGETLT 132
Query: 133 YKFNADSPG----------THFWHSHTGSQR--GDGSFGAFIIRKPRP 168
Y + ++S + G G I+ + RP
Sbjct: 133 YVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCR-RP 179
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 149
Score = 67.9 bits (165), Expect = 5e-14
Identities = 23/134 (17%), Positives = 41/134 (30%), Gaps = 9/134 (6%)
Query: 33 WYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPG--PAVDVCVGDHVIVNL 90
WY + Y + + +N ++ G + + VGD V L
Sbjct: 19 WYLDDNIKTYSDHPEKVNK----DDEEFIESNKMHAINGRMFGNLQGLTMHVGDEVNWYL 74
Query: 91 HN-GLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHT 149
G + ++H+HGH GV + P + + +PG H H
Sbjct: 75 MGMGNEIDLHTVHFHGHSF--QYKHRGVYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHV 132
Query: 150 GSQRGDGSFGAFII 163
G + +
Sbjct: 133 TDHIHAGMETTYTV 146
Score = 59.4 bits (143), Expect = 4e-11
Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 27/115 (23%)
Query: 476 VNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIR 535
+ + + V ++ G H H HGH F+
Sbjct: 62 LTMHVGDEVNWYLMGMG-NEIDLHTVHFHGHSFQY------------------------- 95
Query: 536 RNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGEH 590
+ D + G + + PG WL HCH+ H+ GM + V ++
Sbjct: 96 -KHRGVYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQN 149
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 145
Score = 64.4 bits (156), Expect = 6e-13
Identities = 20/142 (14%), Positives = 45/142 (31%), Gaps = 12/142 (8%)
Query: 27 YDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPG--PAVDVCVGD 84
+D + + + + D + +N + G P + +C GD
Sbjct: 12 FDENESLLLEDNIRMFTTAPDQVDKE----DEDFQESNKMHSMNGFMYGNQPGLTMCKGD 67
Query: 85 HVIVNLHNGLME-ESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYKFNADSPGTH 143
V+ L + E + I++ G+ Y+ + P+++ D+ GT
Sbjct: 68 SVVWYLFSAGNEADVHGIYFSGNT-----YLWRGERRDTANLFPQTSLTLHMWPDTEGTF 122
Query: 144 FWHSHTGSQRGDGSFGAFIIRK 165
T G + + +
Sbjct: 123 NVECLTTDHYTGGMKQKYTVNQ 144
Score = 54.0 bits (129), Expect = 3e-09
Identities = 8/44 (18%), Positives = 13/44 (29%)
Query: 544 KDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587
+DT + + G + C H GM + V
Sbjct: 99 RDTANLFPQTSLTLHMWPDTEGTFNVECLTTDHYTGGMKQKYTV 142
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 146
Score = 59.5 bits (143), Expect = 4e-11
Identities = 15/99 (15%), Positives = 28/99 (28%), Gaps = 7/99 (7%)
Query: 492 GVAYDANHPFHLH-GHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVP 550
G + + + + + A + DT+ +
Sbjct: 53 GYTFGSLPGLSMCAEDRVKWYLFGMGNEVDVHA------AFFHGQALTNKNYRIDTINLF 106
Query: 551 DGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKVGE 589
A NPG W+ C H++ G+ F+V E
Sbjct: 107 PATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQE 145
Score = 56.0 bits (134), Expect = 5e-10
Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 6/100 (6%)
Query: 68 VVNRQLPG--PAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPV 125
VN G P + +C D V L E H + + +
Sbjct: 50 SVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEV----DVHAAFFHGQALTNKNYRIDTINL 105
Query: 126 PPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRK 165
P + F A +PG + G F +++
Sbjct: 106 FPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQE 145
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus)
[TaxId: 9913]}
Length = 116
Score = 57.8 bits (139), Expect = 6e-11
Identities = 17/95 (17%), Positives = 28/95 (29%), Gaps = 8/95 (8%)
Query: 69 VNRQLPG--PAVDVCVGDHVIVNLHNGLME-ESTSIHWHGHHQVDSPYMDGVPHLTQCPV 125
VN + G P + VC DH+ +L E SIH++G ++ +
Sbjct: 26 VNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQV-----LEQNHHKISAITL 80
Query: 126 PPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGA 160
++ G S G
Sbjct: 81 VSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAY 115
Score = 45.5 bits (107), Expect = 2e-06
Identities = 12/109 (11%), Positives = 22/109 (20%), Gaps = 30/109 (27%)
Query: 473 TNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKG 532
+ V + +I + H +G
Sbjct: 34 MPDITVCAHDHISWHLIG-MSSGPELFSIHFNGQVLEQ---------------------- 70
Query: 533 LIRRNLKDAPLKDTVTVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGM 581
+ +T+ T + G W I H + GM
Sbjct: 71 -------NHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGM 112
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId:
1108]}
Length = 139
Score = 51.4 bits (122), Expect = 2e-08
Identities = 15/90 (16%), Positives = 23/90 (25%)
Query: 498 NHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTII 557
N H + +V + + L T + G +
Sbjct: 48 NQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 107
Query: 558 RFHATNPGYWLFHCHIEFHVETGMALVFKV 587
F PG +L+ C H GM V
Sbjct: 108 TFRTPAPGTYLYICTFPGHYLAGMKGTLTV 137
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria
gonorrhoeae, AniA [TaxId: 485]}
Length = 151
Score = 47.4 bits (112), Expect = 6e-07
Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 6/108 (5%)
Query: 69 VNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDG----VPHLTQCP 124
V A+ G+ V + + NG +S H G D Y++G ++
Sbjct: 44 VGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIF-DKVYVEGGKLINENVQSTI 102
Query: 125 VPPRSTFRYKFNADSPGTHFWHSHTGSQRGD-GSFGAFIIRKPRPREV 171
VP + +F D PG + H+ + + G+ G + E+
Sbjct: 103 VPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAENPEI 150
Score = 39.0 bits (90), Expect = 5e-04
Identities = 20/96 (20%), Positives = 26/96 (27%), Gaps = 22/96 (22%)
Query: 498 NHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTII 557
FH+ G F V +E + VP GG I+
Sbjct: 73 VSSFHVIGEIFDKVYVEGGKLIN---------------------ENVQSTIVPAGGSAIV 111
Query: 558 RFHATNPGYWLFHCHIEFH-VETGMALVFKVGEHED 592
F PG + H F G KV E+
Sbjct: 112 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 147
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 173
Score = 46.0 bits (109), Expect = 2e-06
Identities = 18/91 (19%), Positives = 25/91 (27%), Gaps = 20/91 (21%)
Query: 498 NHPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTII 557
+ HL G V +N D +T +P G
Sbjct: 86 DTRPHLIGGHGDYVWATGKFRNPPDLDQ-------------------ETWLIPGGTAGAA 126
Query: 558 RFHATNPGYWLFHCHIEF-HVETGMALVFKV 587
+ PG + + H E G A FKV
Sbjct: 127 FYTFRQPGVYAYVNHNLIEAFELGAAGHFKV 157
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos
taurus) [TaxId: 9913]}
Length = 67
Score = 41.8 bits (98), Expect = 8e-06
Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 17/70 (24%)
Query: 124 PVPPRSTFRYKFNADSPG----------THFWHSH--TGSQRGDGSFGAFIIRKPRPREV 171
+ P T+ Y ++A + ++S G G +I +
Sbjct: 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRK----- 56
Query: 172 HAPLYDFDLP 181
+ ++P
Sbjct: 57 GTLDKETNMP 66
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 177
Score = 42.1 bits (99), Expect = 5e-05
Identities = 19/110 (17%), Positives = 30/110 (27%), Gaps = 29/110 (26%)
Query: 499 HPFHLHGHPFRVVAMERVAKNITRQDVIDMDAKGLIRRNLKDAPLKDTVTVPDGGFTIIR 558
HL G V N ++D+ +T + G
Sbjct: 87 TRPHLIGGHGDWVWETGKFANPPQRDL-------------------ETWFIRGGSAGAAL 127
Query: 559 FHATNPGYWLFHCHIEF-HVETGMALVFKVGEHED---------MAPVPK 598
+ PG + + H E G A KV + AP+P+
Sbjct: 128 YTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIPR 177
>d2ot2a1 b.40.14.1 (A:1-90) Hydrogenase expression/formation
protein HypC {Escherichia coli [TaxId: 562]}
Length = 90
Score = 28.6 bits (64), Expect = 0.59
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 60 DGVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNG 93
G++R + + VG V+V H G
Sbjct: 22 CGIQRDVDLTLVGSCDENGQPRVGQWVLV--HVG 53
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas
europaea [TaxId: 915]}
Length = 112
Score = 28.6 bits (63), Expect = 1.1
Identities = 17/93 (18%), Positives = 23/93 (24%), Gaps = 15/93 (16%)
Query: 57 IPADGVK-RAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMD 115
+ +GV + I N + V GD V V + N G
Sbjct: 18 LNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI------SEGFSIDAFGV-- 69
Query: 116 GVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSH 148
Q + T F AD G
Sbjct: 70 ------QEVIKAGETKTISFTADKAGAFTIWCQ 96
>d1rm6a2 d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reductase alpha
subunit HrcA, C-terminal domain {Thauera aromatica
[TaxId: 59405]}
Length = 636
Score = 29.2 bits (64), Expect = 2.0
Identities = 29/362 (8%), Positives = 67/362 (18%), Gaps = 9/362 (2%)
Query: 1 MEFMYHYKDKHSCQRECIEGDTRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPAD 60
+ + + I T + + + N CG +
Sbjct: 171 ALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTV 230
Query: 61 GVKRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDG-VPH 119
+ A + ++ + + +N+ + + + V
Sbjct: 231 DTRAAFEALLTEMG-EELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAAS 289
Query: 120 LTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYDFD 179
+ R A S + + + + D
Sbjct: 290 GWEERKGKLPKGRGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIG 349
Query: 180 LPEHIMLITDWSHVLGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVF 239
+ M S V + + + G + S T +
Sbjct: 350 QGSNTM----ASQVAAEVLGVRLSRIRVISADSALTPKDNGSY---SSRVTFMVGNASIS 402
Query: 240 TVKQGHSYRFRIINAGYLNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFI 299
++ + ++ + + S + V
Sbjct: 403 AAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVK 462
Query: 300 LNATHHVGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATRTSGTVLN 359
T K Y V+ G LN
Sbjct: 463 GTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALN 522
Query: 360 PL 361
PL
Sbjct: 523 PL 524
>d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 359
Score = 28.3 bits (62), Expect = 3.0
Identities = 23/156 (14%), Positives = 41/156 (26%), Gaps = 7/156 (4%)
Query: 3 FMYHYKDKHSCQRECIEGDTRTCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGV 62
+ E +E D F Y+ S R +
Sbjct: 98 GFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSL----NAIYRYYNQVGRKP 153
Query: 63 KRAITVVNRQLPGPAVDVCVGDHVIVNLHNGLME--ESTSIHWHGHHQVDSPYMDGVPHL 120
+ ++R + C DH++ L + +E I + H S G P+
Sbjct: 154 TMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYP 213
Query: 121 TQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGDG 156
+ + + +P W S G G
Sbjct: 214 QEVSATVQKVME-RLEYCNPYRLVWQSKVGPMPWLG 248
>d1x82a_ b.82.1.7 (A:) Glucose-6-phosphate isomerase, GPI {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 190
Score = 27.7 bits (61), Expect = 3.2
Identities = 23/153 (15%), Positives = 37/153 (24%), Gaps = 16/153 (10%)
Query: 159 GAFIIRKPRPREVHAPLYDFDLPEH-------IMLITDWSHVLGVEMFNAHHHADGDNKP 211
A+ + V +Y + E ++ H HA D
Sbjct: 39 RAWKELVEKEDPVVYEVYAVEQEEKEGDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAE 98
Query: 212 PTILMNGKGRF---KEFRSNATVTYTPMEVFTVKQGHSYRFRIINAGYLNCPIELSIANH 268
+ + GKG ++ P V V ++ R +N G
Sbjct: 99 VYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAH--RTVNIG----DEPFIFLAI 152
Query: 269 TLTAINSDGGDIKPISVGSIVSYAGERWDFILN 301
D G I IV + N
Sbjct: 153 YPADAGHDYGTIAEKGFSKIVIEENGEVKVVDN 185
>d1to4a_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Blood fluke
(Schistosoma mansoni) [TaxId: 6183]}
Length = 156
Score = 27.7 bits (61), Expect = 3.4
Identities = 11/45 (24%), Positives = 15/45 (33%)
Query: 116 GVPHLTQCPVPPRSTFRYKFNADSPGTHFWHSHTGSQRGDGSFGA 160
GV TQ +F+ G H +H H +G A
Sbjct: 18 GVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSA 62
>d1r89a2 d.218.1.7 (A:1-142) tRNA nucleotidyltransferase, N-terminal
domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 27.1 bits (60), Expect = 3.7
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Query: 601 PTCGDYYNVDSVEDEDNEIGEIGEKKEVTTQGSVAGDEIIPGSDDLDKKVQYEVMPTDDV 660
P + E+E + E GS A + + GS ++D + + P +
Sbjct: 16 PDEEEVRKGREAEEELRRRLDE-LGVEYVFVGSYARNTWLKGSLEIDVFL---LFPEEFS 71
Query: 661 RVNTSDEHLDFTHNR 675
+ + L+
Sbjct: 72 KEELRERGLEIGKAV 86
>d1dcea2 b.7.4.1 (A:242-350) Rab geranylgeranyltransferase
alpha-subunit, insert domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 109
Score = 26.0 bits (57), Expect = 7.2
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 164 RKPRPREVHAPLYDFDLPEH 183
R P R + ++ DLP
Sbjct: 47 RTPDGRNRPSHVWLCDLPAA 66
>d1v97a5 d.133.1.1 (A:695-1332) Xanthine oxidase, C-terminal domain
{Cow (Bos taurus) [TaxId: 9913]}
Length = 638
Score = 27.2 bits (59), Expect = 7.6
Identities = 32/356 (8%), Positives = 60/356 (16%), Gaps = 18/356 (5%)
Query: 24 TCTYDFHIEWYYTMSKACYDCPFNVTDCGRLHCIPADGVKRAITVVNRQLPGPAVDVCVG 83
T H + +
Sbjct: 140 LITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPN 199
Query: 84 DHVIVNLHNGLMEESTSIHWHGHHQVDSPYMDGVPHLTQCPVPPRSTFRYK---FNADSP 140
L + +T+ G Q + + + P R+K D
Sbjct: 200 IRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLT 259
Query: 141 GTHFWHSHTGSQRGDGSFGAFIIRKPRPREVHAPLYD-------FDLPEHIMLITDWSHV 193
+ R R EV + + I+
Sbjct: 260 HFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPF 319
Query: 194 LGVEMFNAHHHADGDNKPPTILMNGKGRFKEFRSNATVTYTPMEVFTVKQGHSYRFRIIN 253
L H + DG + + + + + N
Sbjct: 320 LNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPN 379
Query: 254 AGY--------LNCPIELSIANHTLTAINSDGGDIKPISVGSIVSYAGERWDFILNATHH 305
+ + L + S V A + + +
Sbjct: 380 SSPTAASVSTDIYGQAVYEACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFY 439
Query: 306 VGNYWIKMRGLMDCDERFTSAYQTAVLRYEGAPDESPAGEVDYDATRTSGTVLNPL 361
+ Y A E + D G+ LNP
Sbjct: 440 RTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPA 495
>d1jera_ b.6.1.1 (A:) Stellacyanin {Cucumber (Cucumis sativus)
[TaxId: 3659]}
Length = 110
Score = 25.7 bits (56), Expect = 8.8
Identities = 10/40 (25%), Positives = 11/40 (27%), Gaps = 2/40 (5%)
Query: 548 TVPDGGFTIIRFHATNPGYWLFHCHIEFHVETGMALVFKV 587
V I R G F C + H G L V
Sbjct: 69 DVERTSPVIERL--DELGMHYFVCTVGTHCSNGQKLSINV 106
>d2nr4a1 b.45.1.4 (A:19-210) Hypothetical protein MM1853
{Methanosarcina mazei [TaxId: 2209]}
Length = 192
Score = 26.4 bits (58), Expect = 9.1
Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
Query: 463 DRCADSYCECTNVVNVPLESVVELIIIDEGVAYDANHPFHLHGHPFRVVAMERVAKNITR 522
+ A EC N+ N V +L+ ++ G + F V + TR
Sbjct: 96 EAIAWVVFECINLRNTDQSLVADLVPLNAGFNERNIKELPVPNRGFNAVL--EATVHATR 153
Query: 523 QDVIDMD 529
+ +
Sbjct: 154 YQLTGEE 160
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.435
Gapped
Lambda K H
0.267 0.0464 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,822,768
Number of extensions: 141268
Number of successful extensions: 550
Number of sequences better than 10.0: 1
Number of HSP's gapped: 455
Number of HSP's successfully gapped: 86
Length of query: 695
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 603
Effective length of database: 1,144,436
Effective search space: 690094908
Effective search space used: 690094908
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.0 bits)