Query psy9783
Match_columns 726
No_of_seqs 332 out of 1960
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 19:29:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9783.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9783hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1y8q_B Anthracycline-, ubiquit 100.0 4E-113 1E-117 980.9 43.2 530 5-661 3-559 (640)
2 3cmm_A Ubiquitin-activating en 100.0 1.8E-98 6E-103 898.0 31.9 516 2-653 408-1000(1015)
3 1tt5_B Ubiquitin-activating en 100.0 1.9E-60 6.5E-65 526.9 26.3 356 10-632 30-407 (434)
4 2nvu_B Maltose binding protein 100.0 2.2E-57 7.5E-62 534.9 32.8 360 6-632 397-778 (805)
5 1z7l_A Ubiquitin-activating en 100.0 3.3E-44 1.1E-48 375.6 6.2 216 253-506 10-276 (276)
6 1y8q_A Ubiquitin-like 1 activa 100.0 3.7E-37 1.3E-41 331.9 19.5 162 2-251 19-180 (346)
7 1tt5_A APPBP1, amyloid protein 100.0 6.6E-35 2.3E-39 330.1 10.0 187 2-275 15-201 (531)
8 3h8v_A Ubiquitin-like modifier 100.0 9.2E-34 3.1E-38 299.2 15.3 160 6-251 22-195 (292)
9 1zud_1 Adenylyltransferase THI 100.0 7E-33 2.4E-37 285.8 14.1 164 2-251 9-175 (251)
10 3rui_A Ubiquitin-like modifier 100.0 3.1E-32 1.1E-36 292.5 13.9 173 6-251 21-201 (340)
11 1jw9_B Molybdopterin biosynthe 100.0 1.4E-31 5E-36 275.6 14.3 164 2-251 12-178 (249)
12 3h5n_A MCCB protein; ubiquitin 100.0 2.1E-30 7.2E-35 279.9 17.6 163 2-250 95-265 (353)
13 4gsl_A Ubiquitin-like modifier 100.0 8.9E-31 3E-35 298.0 14.0 171 7-250 314-492 (615)
14 3cmm_A Ubiquitin-activating en 100.0 1.8E-30 6.1E-35 311.6 13.3 182 2-278 10-194 (1015)
15 3vh1_A Ubiquitin-like modifier 100.0 9.7E-30 3.3E-34 289.3 14.3 171 7-250 315-493 (598)
16 1z7l_A Ubiquitin-activating en 98.2 2.8E-07 9.7E-12 96.6 1.8 66 440-505 100-179 (276)
17 3ic5_A Putative saccharopine d 97.3 0.00079 2.7E-08 58.7 8.7 34 19-52 5-38 (118)
18 2g1u_A Hypothetical protein TM 96.8 0.0075 2.6E-07 56.3 10.9 39 14-53 14-52 (155)
19 3jyo_A Quinate/shikimate dehyd 96.8 0.0019 6.6E-08 67.5 7.5 36 17-52 125-160 (283)
20 2hmt_A YUAA protein; RCK, KTN, 96.6 0.0099 3.4E-07 53.4 9.6 36 16-52 3-38 (144)
21 3dfz_A SIRC, precorrin-2 dehyd 96.5 0.0053 1.8E-07 62.3 8.2 36 16-52 28-63 (223)
22 3llv_A Exopolyphosphatase-rela 96.5 0.013 4.5E-07 53.4 10.1 34 18-52 5-38 (141)
23 1y8x_B Ubiquitin-activating en 96.4 0.001 3.4E-08 59.6 1.9 64 566-632 1-71 (98)
24 4ina_A Saccharopine dehydrogen 96.3 0.012 4E-07 64.3 10.2 33 20-52 2-36 (405)
25 3abi_A Putative uncharacterize 96.2 0.0088 3E-07 64.0 7.9 36 191-227 73-108 (365)
26 3e8x_A Putative NAD-dependent 95.8 0.069 2.4E-06 52.4 12.0 40 11-51 13-53 (236)
27 1lss_A TRK system potassium up 95.7 0.02 6.7E-07 51.3 7.0 32 20-52 5-36 (140)
28 1hdo_A Biliverdin IX beta redu 95.5 0.08 2.7E-06 50.1 10.7 34 19-53 3-37 (206)
29 3c85_A Putative glutathione-re 95.3 0.087 3E-06 50.1 10.2 35 17-52 37-72 (183)
30 3tum_A Shikimate dehydrogenase 95.3 0.05 1.7E-06 56.5 9.1 34 17-50 123-156 (269)
31 3dhn_A NAD-dependent epimerase 95.2 0.092 3.1E-06 50.9 10.5 33 20-53 5-38 (227)
32 1kyq_A Met8P, siroheme biosynt 95.1 0.043 1.5E-06 57.3 8.1 36 17-53 11-46 (274)
33 2ph5_A Homospermidine synthase 95.1 0.07 2.4E-06 59.9 10.1 35 19-53 13-50 (480)
34 1pjq_A CYSG, siroheme synthase 95.0 0.082 2.8E-06 58.7 10.5 35 17-52 10-44 (457)
35 3gpi_A NAD-dependent epimerase 95.0 0.1 3.5E-06 52.7 10.2 34 18-52 2-35 (286)
36 2z2v_A Hypothetical protein PH 94.7 0.034 1.2E-06 60.0 6.2 32 18-51 15-46 (365)
37 3onh_A Ubiquitin-activating en 94.4 0.055 1.9E-06 50.4 6.0 61 574-640 9-81 (127)
38 2bka_A CC3, TAT-interacting pr 94.2 0.57 2E-05 45.7 13.4 36 17-52 16-53 (242)
39 3dqp_A Oxidoreductase YLBE; al 94.2 0.2 7E-06 48.5 9.9 31 21-52 2-33 (219)
40 3l4b_C TRKA K+ channel protien 94.1 0.079 2.7E-06 52.0 7.0 32 20-52 1-32 (218)
41 3ruf_A WBGU; rossmann fold, UD 94.1 0.23 7.8E-06 51.4 10.7 36 15-51 21-57 (351)
42 2pzm_A Putative nucleotide sug 94.0 0.14 4.9E-06 52.9 9.0 37 15-52 16-53 (330)
43 4id9_A Short-chain dehydrogena 94.0 0.24 8.1E-06 51.2 10.6 41 11-52 11-52 (347)
44 4egb_A DTDP-glucose 4,6-dehydr 94.0 0.23 7.8E-06 51.3 10.4 35 17-51 22-58 (346)
45 3i6i_A Putative leucoanthocyan 93.9 0.27 9.2E-06 51.1 10.9 35 17-52 8-43 (346)
46 3rku_A Oxidoreductase YMR226C; 93.9 0.26 9E-06 50.7 10.7 41 11-51 25-68 (287)
47 1y1p_A ARII, aldehyde reductas 93.9 0.61 2.1E-05 47.6 13.3 34 17-51 9-43 (342)
48 2gn4_A FLAA1 protein, UDP-GLCN 93.9 0.38 1.3E-05 50.5 12.1 36 17-52 19-56 (344)
49 3h2s_A Putative NADH-flavin re 93.9 0.3 1E-05 47.0 10.4 31 20-51 1-32 (224)
50 2axq_A Saccharopine dehydrogen 93.7 0.093 3.2E-06 58.6 7.3 36 16-51 20-55 (467)
51 1sb8_A WBPP; epimerase, 4-epim 93.5 0.33 1.1E-05 50.4 10.7 34 17-51 25-59 (352)
52 3kkj_A Amine oxidase, flavin-c 93.4 0.07 2.4E-06 49.9 4.8 33 19-52 2-34 (336)
53 3r6d_A NAD-dependent epimerase 93.4 0.37 1.3E-05 46.7 10.1 32 20-52 6-39 (221)
54 3nzo_A UDP-N-acetylglucosamine 93.4 0.71 2.4E-05 49.7 13.3 37 15-51 31-68 (399)
55 1id1_A Putative potassium chan 93.3 0.074 2.5E-06 49.3 4.8 34 18-52 2-35 (153)
56 3fwz_A Inner membrane protein 93.2 0.094 3.2E-06 48.1 5.3 34 19-53 7-40 (140)
57 3slg_A PBGP3 protein; structur 93.2 0.2 6.9E-06 52.4 8.5 39 13-52 18-58 (372)
58 3m2p_A UDP-N-acetylglucosamine 92.9 0.52 1.8E-05 48.0 10.9 33 19-52 2-35 (311)
59 2x6t_A ADP-L-glycero-D-manno-h 92.9 0.52 1.8E-05 49.0 11.1 37 16-52 43-80 (357)
60 3qsg_A NAD-binding phosphogluc 92.9 0.22 7.5E-06 52.1 8.2 34 19-52 24-57 (312)
61 3tnl_A Shikimate dehydrogenase 92.9 0.086 3E-06 56.0 5.1 36 17-52 152-187 (315)
62 3oj0_A Glutr, glutamyl-tRNA re 92.8 0.045 1.5E-06 50.3 2.5 39 13-52 15-53 (144)
63 2egg_A AROE, shikimate 5-dehyd 92.6 0.079 2.7E-06 55.5 4.3 36 17-52 139-174 (297)
64 1ff9_A Saccharopine reductase; 92.5 0.24 8.3E-06 54.8 8.3 34 18-52 2-35 (450)
65 2b69_A UDP-glucuronate decarbo 92.5 0.91 3.1E-05 46.9 12.2 39 12-51 20-59 (343)
66 3t4e_A Quinate/shikimate dehyd 92.4 0.11 3.7E-06 55.2 5.1 35 17-51 146-180 (312)
67 3sxp_A ADP-L-glycero-D-mannohe 92.4 0.51 1.7E-05 49.3 10.2 35 17-52 8-45 (362)
68 2x4g_A Nucleoside-diphosphate- 92.4 0.6 2E-05 47.9 10.6 32 20-52 14-46 (342)
69 3pwz_A Shikimate dehydrogenase 92.4 0.11 3.6E-06 54.1 4.9 35 17-51 118-152 (272)
70 1vl6_A Malate oxidoreductase; 92.3 0.12 4.1E-06 56.5 5.4 37 16-52 189-225 (388)
71 3don_A Shikimate dehydrogenase 92.3 0.093 3.2E-06 54.7 4.3 37 17-53 115-151 (277)
72 3ko8_A NAD-dependent epimerase 92.2 0.92 3.1E-05 45.9 11.6 31 20-51 1-32 (312)
73 2hk9_A Shikimate dehydrogenase 92.2 0.13 4.3E-06 53.0 5.2 35 17-52 127-161 (275)
74 2q1w_A Putative nucleotide sug 92.2 0.5 1.7E-05 48.8 9.8 36 16-52 18-54 (333)
75 3o8q_A Shikimate 5-dehydrogena 92.0 0.11 3.9E-06 54.1 4.6 35 17-51 124-158 (281)
76 2a9f_A Putative malic enzyme ( 91.9 0.14 4.9E-06 56.1 5.4 38 16-53 185-222 (398)
77 3fbt_A Chorismate mutase and s 91.9 0.12 4.1E-06 54.1 4.6 35 17-51 120-154 (282)
78 2hun_A 336AA long hypothetical 91.7 0.76 2.6E-05 47.1 10.4 35 18-52 2-38 (336)
79 3nyw_A Putative oxidoreductase 91.6 0.38 1.3E-05 48.2 7.9 34 17-51 5-39 (250)
80 3u62_A Shikimate dehydrogenase 91.6 0.15 5.2E-06 52.3 4.8 35 17-52 107-141 (253)
81 1xg5_A ARPG836; short chain de 91.5 0.64 2.2E-05 46.9 9.5 36 16-52 29-65 (279)
82 2dvm_A Malic enzyme, 439AA lon 91.4 0.14 4.7E-06 56.9 4.7 35 16-50 183-219 (439)
83 1nyt_A Shikimate 5-dehydrogena 91.4 0.15 5.3E-06 52.2 4.7 34 17-51 117-150 (271)
84 4hb9_A Similarities with proba 91.3 0.17 5.8E-06 52.9 5.1 33 19-52 1-33 (412)
85 3t4x_A Oxidoreductase, short c 91.3 0.46 1.6E-05 47.9 8.1 34 17-51 8-42 (267)
86 2ywl_A Thioredoxin reductase r 91.2 0.2 6.9E-06 46.9 5.0 32 21-53 3-34 (180)
87 2q1s_A Putative nucleotide sug 91.2 0.76 2.6E-05 48.4 10.0 37 16-52 29-66 (377)
88 3dtt_A NADP oxidoreductase; st 91.1 0.21 7.3E-06 50.2 5.3 39 13-52 13-51 (245)
89 3lf2_A Short chain oxidoreduct 91.1 0.55 1.9E-05 47.3 8.4 35 17-52 6-41 (265)
90 3qvo_A NMRA family protein; st 91.0 0.8 2.7E-05 45.0 9.4 36 17-52 21-57 (236)
91 1gpj_A Glutamyl-tRNA reductase 91.0 0.17 6E-06 55.0 4.9 35 17-51 165-199 (404)
92 1lld_A L-lactate dehydrogenase 90.8 0.21 7.2E-06 51.8 5.2 35 18-52 6-41 (319)
93 3ehe_A UDP-glucose 4-epimerase 90.7 0.38 1.3E-05 49.0 6.9 29 20-50 2-31 (313)
94 1rkx_A CDP-glucose-4,6-dehydra 90.6 1.1 3.7E-05 46.5 10.3 37 15-52 5-42 (357)
95 3d4o_A Dipicolinate synthase s 90.4 0.23 7.9E-06 51.4 5.0 36 16-52 152-187 (293)
96 1npy_A Hypothetical shikimate 90.4 0.22 7.5E-06 51.6 4.8 33 18-50 118-150 (271)
97 2ewd_A Lactate dehydrogenase,; 90.3 0.25 8.4E-06 51.8 5.1 34 19-52 4-37 (317)
98 1orr_A CDP-tyvelose-2-epimeras 90.3 1 3.5E-05 46.1 9.8 31 20-51 2-33 (347)
99 1p77_A Shikimate 5-dehydrogena 90.3 0.18 6E-06 51.9 3.9 35 17-52 117-151 (272)
100 1ek6_A UDP-galactose 4-epimera 90.2 1.1 3.8E-05 46.1 9.9 33 19-52 2-35 (348)
101 1r6d_A TDP-glucose-4,6-dehydra 90.2 1.6 5.4E-05 44.8 11.1 32 21-52 2-39 (337)
102 2d5c_A AROE, shikimate 5-dehyd 90.2 0.21 7.3E-06 50.7 4.4 33 17-51 115-147 (263)
103 3i83_A 2-dehydropantoate 2-red 90.2 0.25 8.5E-06 51.6 5.0 32 20-52 3-34 (320)
104 3e48_A Putative nucleoside-dip 90.1 1.7 5.9E-05 43.5 11.1 33 20-52 1-34 (289)
105 2raf_A Putative dinucleotide-b 90.1 0.28 9.4E-06 48.3 5.1 36 16-52 16-51 (209)
106 3ghy_A Ketopantoate reductase 90.1 0.23 7.9E-06 52.2 4.8 32 19-51 3-34 (335)
107 3phh_A Shikimate dehydrogenase 90.1 0.27 9.1E-06 51.2 5.1 32 19-51 118-149 (269)
108 3o26_A Salutaridine reductase; 90.1 0.8 2.7E-05 46.2 8.6 36 16-52 9-45 (311)
109 3gvi_A Malate dehydrogenase; N 90.0 0.27 9.2E-06 52.3 5.1 37 16-52 4-40 (324)
110 3g17_A Similar to 2-dehydropan 90.0 0.23 7.7E-06 51.3 4.5 33 19-52 2-34 (294)
111 2c5a_A GDP-mannose-3', 5'-epim 90.0 1.5 5.1E-05 46.2 10.9 33 19-52 29-62 (379)
112 2rir_A Dipicolinate synthase, 89.9 0.27 9.1E-06 51.1 5.0 36 16-52 154-189 (300)
113 1xq6_A Unknown protein; struct 89.9 0.94 3.2E-05 44.0 8.6 35 18-52 3-39 (253)
114 1iy8_A Levodione reductase; ox 89.9 0.94 3.2E-05 45.4 8.9 35 16-51 10-45 (267)
115 1oc2_A DTDP-glucose 4,6-dehydr 89.9 1.4 4.8E-05 45.3 10.4 33 20-52 5-39 (348)
116 1ks9_A KPA reductase;, 2-dehyd 89.9 0.28 9.7E-06 49.4 5.0 32 21-53 2-33 (291)
117 1hyh_A L-hicdh, L-2-hydroxyiso 89.8 0.28 9.7E-06 51.1 5.1 33 20-52 2-35 (309)
118 3hn2_A 2-dehydropantoate 2-red 89.7 0.23 8E-06 51.7 4.3 32 20-52 3-34 (312)
119 3qiv_A Short-chain dehydrogena 89.6 0.94 3.2E-05 44.8 8.5 36 16-52 6-42 (253)
120 4e12_A Diketoreductase; oxidor 89.6 0.3 1E-05 50.2 5.0 32 20-52 5-36 (283)
121 3p7m_A Malate dehydrogenase; p 89.6 0.27 9.3E-06 52.2 4.8 36 17-52 3-38 (321)
122 2c20_A UDP-glucose 4-epimerase 89.5 1.7 5.7E-05 44.3 10.6 32 20-52 2-34 (330)
123 2hjr_A Malate dehydrogenase; m 89.5 0.31 1E-05 51.7 5.1 38 15-52 10-47 (328)
124 3rft_A Uronate dehydrogenase; 89.5 0.51 1.7E-05 47.4 6.6 34 19-53 3-37 (267)
125 2ew2_A 2-dehydropantoate 2-red 89.5 0.31 1.1E-05 49.6 5.1 31 20-51 4-34 (316)
126 1e6u_A GDP-fucose synthetase; 89.5 1.1 3.7E-05 45.5 9.1 32 19-51 3-35 (321)
127 3d1l_A Putative NADP oxidoredu 89.5 0.36 1.2E-05 48.6 5.4 35 17-51 8-42 (266)
128 2rcy_A Pyrroline carboxylate r 89.3 0.27 9.1E-06 49.3 4.3 34 19-52 4-40 (262)
129 2bll_A Protein YFBG; decarboxy 89.2 1.6 5.4E-05 44.6 10.2 32 20-52 1-34 (345)
130 1f0y_A HCDH, L-3-hydroxyacyl-C 89.2 0.33 1.1E-05 50.1 5.1 32 20-52 16-47 (302)
131 1nvt_A Shikimate 5'-dehydrogen 89.2 0.19 6.4E-06 52.0 3.1 33 17-51 126-158 (287)
132 1n2s_A DTDP-4-, DTDP-glucose o 89.1 1.3 4.6E-05 44.4 9.3 31 21-53 2-33 (299)
133 2z1n_A Dehydrogenase; reductas 88.8 1.3 4.3E-05 44.3 8.8 34 17-51 5-39 (260)
134 2jl1_A Triphenylmethane reduct 88.7 0.66 2.2E-05 46.4 6.7 31 20-51 1-34 (287)
135 3enk_A UDP-glucose 4-epimerase 88.7 1.8 6E-05 44.4 10.1 32 19-51 5-37 (341)
136 3svt_A Short-chain type dehydr 88.6 1.4 4.7E-05 44.6 9.1 36 16-52 8-44 (281)
137 1bg6_A N-(1-D-carboxylethyl)-L 88.6 0.39 1.3E-05 50.1 5.1 33 19-52 4-36 (359)
138 2vhw_A Alanine dehydrogenase; 88.6 0.35 1.2E-05 52.1 4.9 36 16-52 165-200 (377)
139 3st7_A Capsular polysaccharide 88.6 0.87 3E-05 47.7 7.8 33 20-52 1-34 (369)
140 3vku_A L-LDH, L-lactate dehydr 88.5 0.39 1.3E-05 51.2 5.1 34 18-51 8-42 (326)
141 3tl2_A Malate dehydrogenase; c 88.5 0.33 1.1E-05 51.4 4.5 35 18-52 7-41 (315)
142 1yvv_A Amine oxidase, flavin-c 88.5 0.4 1.4E-05 49.0 5.0 33 20-53 3-35 (336)
143 1np3_A Ketol-acid reductoisome 88.5 0.48 1.7E-05 50.2 5.8 36 15-51 12-47 (338)
144 2vns_A Metalloreductase steap3 88.5 0.44 1.5E-05 47.0 5.2 33 19-52 28-60 (215)
145 2cul_A Glucose-inhibited divis 88.4 0.45 1.6E-05 47.0 5.2 34 18-52 2-35 (232)
146 3ioy_A Short-chain dehydrogena 88.4 0.79 2.7E-05 47.8 7.2 35 17-52 6-41 (319)
147 3ego_A Probable 2-dehydropanto 88.2 0.41 1.4E-05 49.9 4.9 32 19-52 2-33 (307)
148 1pzg_A LDH, lactate dehydrogen 88.2 0.43 1.5E-05 50.7 5.1 33 20-52 10-42 (331)
149 3dje_A Fructosyl amine: oxygen 88.2 0.47 1.6E-05 50.8 5.5 36 19-54 6-41 (438)
150 1pjc_A Protein (L-alanine dehy 88.1 0.4 1.4E-05 51.3 4.9 35 17-52 165-199 (361)
151 2eez_A Alanine dehydrogenase; 88.0 0.4 1.4E-05 51.4 4.9 34 17-51 164-197 (369)
152 2hrz_A AGR_C_4963P, nucleoside 88.0 1.4 4.9E-05 45.2 8.9 36 17-52 12-54 (342)
153 1yqg_A Pyrroline-5-carboxylate 88.0 0.48 1.6E-05 47.4 5.1 31 21-51 2-32 (263)
154 3ond_A Adenosylhomocysteinase; 88.0 0.38 1.3E-05 54.1 4.8 35 17-52 263-297 (488)
155 3c96_A Flavin-containing monoo 88.0 0.47 1.6E-05 50.6 5.4 35 19-53 4-38 (410)
156 1vl0_A DTDP-4-dehydrorhamnose 87.9 1.3 4.3E-05 44.5 8.2 35 17-52 10-45 (292)
157 2v6b_A L-LDH, L-lactate dehydr 87.8 0.47 1.6E-05 49.6 5.1 33 20-52 1-34 (304)
158 2f1k_A Prephenate dehydrogenas 87.8 0.48 1.6E-05 47.9 5.1 30 21-51 2-31 (279)
159 1c0p_A D-amino acid oxidase; a 87.7 0.52 1.8E-05 49.2 5.3 36 19-55 6-41 (363)
160 3sc6_A DTDP-4-dehydrorhamnose 87.7 1.2 4.1E-05 44.5 7.9 31 20-51 6-37 (287)
161 1lu9_A Methylene tetrahydromet 87.6 0.42 1.4E-05 49.1 4.5 34 17-51 117-151 (287)
162 3sju_A Keto reductase; short-c 87.5 1.4 4.9E-05 44.7 8.4 37 15-52 20-57 (279)
163 3pqe_A L-LDH, L-lactate dehydr 87.5 0.51 1.7E-05 50.3 5.2 34 19-52 5-39 (326)
164 1y56_B Sarcosine oxidase; dehy 87.5 0.53 1.8E-05 49.2 5.3 36 19-55 5-40 (382)
165 3d1c_A Flavin-containing putat 87.4 0.38 1.3E-05 49.9 4.0 35 19-53 4-38 (369)
166 3nv9_A Malic enzyme; rossmann 87.4 0.43 1.5E-05 53.3 4.6 40 15-54 215-256 (487)
167 3d0o_A L-LDH 1, L-lactate dehy 87.4 0.46 1.6E-05 50.0 4.7 36 17-52 4-40 (317)
168 3fi9_A Malate dehydrogenase; s 87.3 0.45 1.5E-05 51.1 4.7 37 16-52 5-43 (343)
169 4dqv_A Probable peptide synthe 87.2 2.4 8.3E-05 46.6 10.6 34 18-51 72-108 (478)
170 2g5c_A Prephenate dehydrogenas 87.2 0.58 2E-05 47.5 5.2 32 20-51 2-34 (281)
171 2x0j_A Malate dehydrogenase; o 87.1 0.51 1.7E-05 49.6 4.9 32 20-51 1-33 (294)
172 3rp8_A Flavoprotein monooxygen 87.1 0.56 1.9E-05 49.8 5.3 38 15-53 19-56 (407)
173 2yy7_A L-threonine dehydrogena 87.0 1.3 4.5E-05 44.7 7.7 34 19-52 2-37 (312)
174 2izz_A Pyrroline-5-carboxylate 86.9 0.52 1.8E-05 49.4 4.8 36 17-52 20-58 (322)
175 3tjr_A Short chain dehydrogena 86.9 1.7 5.8E-05 44.7 8.7 34 17-51 29-63 (301)
176 3g0o_A 3-hydroxyisobutyrate de 86.9 0.58 2E-05 48.3 5.1 33 19-52 7-39 (303)
177 1ryi_A Glycine oxidase; flavop 86.9 0.54 1.8E-05 49.0 4.9 36 19-55 17-52 (382)
178 3h5n_A MCCB protein; ubiquitin 86.8 0.53 1.8E-05 50.5 4.9 34 136-169 150-183 (353)
179 1sby_A Alcohol dehydrogenase; 86.8 0.61 2.1E-05 46.3 5.1 36 17-52 3-39 (254)
180 3pef_A 6-phosphogluconate dehy 86.8 0.6 2E-05 47.8 5.1 33 20-53 2-34 (287)
181 1a5z_A L-lactate dehydrogenase 86.7 0.59 2E-05 49.1 5.1 33 20-52 1-34 (319)
182 1jay_A Coenzyme F420H2:NADP+ o 86.6 0.58 2E-05 45.2 4.7 30 21-51 2-32 (212)
183 3cgv_A Geranylgeranyl reductas 86.6 0.4 1.4E-05 50.1 3.7 34 19-53 4-37 (397)
184 2uzz_A N-methyl-L-tryptophan o 86.4 0.42 1.4E-05 49.6 3.8 35 19-54 2-36 (372)
185 3cky_A 2-hydroxymethyl glutara 86.3 0.56 1.9E-05 47.9 4.6 33 19-52 4-36 (301)
186 3o38_A Short chain dehydrogena 86.2 0.43 1.5E-05 47.8 3.6 36 16-52 19-56 (266)
187 3doj_A AT3G25530, dehydrogenas 86.2 0.64 2.2E-05 48.4 5.0 35 18-53 20-54 (310)
188 3ew7_A LMO0794 protein; Q8Y8U8 86.2 0.77 2.6E-05 43.8 5.2 32 20-52 1-33 (221)
189 3ggo_A Prephenate dehydrogenas 86.1 0.67 2.3E-05 48.7 5.2 33 20-52 34-67 (314)
190 3qy9_A DHPR, dihydrodipicolina 86.1 2.5 8.7E-05 43.1 9.3 32 20-52 4-36 (243)
191 2uyy_A N-PAC protein; long-cha 86.1 0.63 2.2E-05 48.1 4.9 32 20-52 31-62 (316)
192 2d4a_B Malate dehydrogenase; a 86.0 0.64 2.2E-05 48.8 4.9 32 21-52 1-32 (308)
193 3fbs_A Oxidoreductase; structu 85.9 0.72 2.5E-05 45.8 5.1 32 20-52 3-34 (297)
194 4ezb_A Uncharacterized conserv 85.9 0.42 1.4E-05 50.1 3.5 47 6-52 11-57 (317)
195 2xdo_A TETX2 protein; tetracyc 85.9 0.56 1.9E-05 49.8 4.5 35 18-53 25-59 (398)
196 2gf3_A MSOX, monomeric sarcosi 85.8 0.66 2.3E-05 48.4 4.9 34 20-54 4-37 (389)
197 3hwr_A 2-dehydropantoate 2-red 85.7 0.72 2.5E-05 48.2 5.1 31 18-49 18-48 (318)
198 4f3y_A DHPR, dihydrodipicolina 85.7 0.88 3E-05 47.3 5.7 38 192-231 70-107 (272)
199 3evt_A Phosphoglycerate dehydr 85.7 0.69 2.4E-05 49.2 5.0 37 15-52 133-169 (324)
200 2dbq_A Glyoxylate reductase; D 85.6 0.64 2.2E-05 49.3 4.7 35 16-51 147-181 (334)
201 3ay3_A NAD-dependent epimerase 85.6 1.4 4.9E-05 43.7 7.1 32 20-52 3-35 (267)
202 3oz2_A Digeranylgeranylglycero 85.6 0.64 2.2E-05 48.0 4.7 30 21-51 6-35 (397)
203 1txg_A Glycerol-3-phosphate de 85.6 0.67 2.3E-05 47.9 4.8 30 21-51 2-31 (335)
204 1ldn_A L-lactate dehydrogenase 85.6 0.73 2.5E-05 48.5 5.1 33 20-52 7-40 (316)
205 2ekl_A D-3-phosphoglycerate de 85.5 0.66 2.3E-05 48.9 4.8 35 16-51 139-173 (313)
206 3tri_A Pyrroline-5-carboxylate 85.5 0.66 2.3E-05 47.8 4.7 34 18-51 2-37 (280)
207 1j4a_A D-LDH, D-lactate dehydr 85.5 0.74 2.5E-05 48.9 5.2 35 16-51 143-177 (333)
208 3uve_A Carveol dehydrogenase ( 85.5 3.2 0.00011 41.9 9.8 36 16-52 8-44 (286)
209 3gvx_A Glycerate dehydrogenase 85.5 0.68 2.3E-05 48.5 4.7 36 16-52 119-154 (290)
210 1t2d_A LDH-P, L-lactate dehydr 85.4 0.75 2.6E-05 48.6 5.2 33 20-52 5-37 (322)
211 4da9_A Short-chain dehydrogena 85.4 2.8 9.4E-05 42.6 9.2 34 16-50 26-60 (280)
212 3vrd_B FCCB subunit, flavocyto 85.4 0.77 2.6E-05 48.6 5.3 34 19-52 2-36 (401)
213 2gf2_A Hibadh, 3-hydroxyisobut 85.4 0.64 2.2E-05 47.3 4.5 31 21-52 2-32 (296)
214 2d0i_A Dehydrogenase; structur 85.4 0.55 1.9E-05 49.9 4.1 35 16-51 143-177 (333)
215 2h78_A Hibadh, 3-hydroxyisobut 85.4 0.65 2.2E-05 47.7 4.5 32 20-52 4-35 (302)
216 3alj_A 2-methyl-3-hydroxypyrid 85.3 0.75 2.6E-05 48.4 5.1 36 17-53 9-44 (379)
217 1z82_A Glycerol-3-phosphate de 85.2 0.77 2.6E-05 48.1 5.1 33 18-51 13-45 (335)
218 1x13_A NAD(P) transhydrogenase 85.1 0.65 2.2E-05 50.6 4.6 35 17-52 170-204 (401)
219 2dpo_A L-gulonate 3-dehydrogen 85.1 0.76 2.6E-05 48.6 5.0 33 19-52 6-38 (319)
220 2z1m_A GDP-D-mannose dehydrata 85.1 0.82 2.8E-05 46.7 5.1 34 18-52 2-36 (345)
221 1k0i_A P-hydroxybenzoate hydro 85.0 0.76 2.6E-05 48.4 5.0 34 19-53 2-35 (394)
222 2gcg_A Glyoxylate reductase/hy 85.0 0.6 2E-05 49.4 4.1 36 16-52 152-187 (330)
223 3nix_A Flavoprotein/dehydrogen 84.9 0.65 2.2E-05 49.2 4.4 35 19-54 5-39 (421)
224 4a9w_A Monooxygenase; baeyer-v 84.9 0.56 1.9E-05 47.8 3.8 33 19-52 3-35 (357)
225 3gt0_A Pyrroline-5-carboxylate 84.8 0.78 2.7E-05 45.9 4.7 32 20-51 3-37 (247)
226 1leh_A Leucine dehydrogenase; 84.8 0.74 2.5E-05 49.8 4.8 35 17-52 171-205 (364)
227 1p9l_A Dihydrodipicolinate red 84.8 2.4 8.3E-05 43.3 8.4 31 21-51 2-34 (245)
228 4aj2_A L-lactate dehydrogenase 84.8 0.73 2.5E-05 49.2 4.7 38 15-52 15-53 (331)
229 3ihm_A Styrene monooxygenase A 84.8 0.77 2.6E-05 49.7 5.0 33 20-53 23-55 (430)
230 3dme_A Conserved exported prot 84.8 0.77 2.6E-05 47.1 4.8 33 19-52 4-36 (369)
231 1wwk_A Phosphoglycerate dehydr 84.7 0.76 2.6E-05 48.2 4.7 35 16-51 139-173 (307)
232 4f6c_A AUSA reductase domain p 84.7 3.1 0.00011 44.6 9.6 30 20-50 70-100 (427)
233 3ldh_A Lactate dehydrogenase; 84.6 0.89 3E-05 48.6 5.2 33 19-51 21-54 (330)
234 1ur5_A Malate dehydrogenase; o 84.5 0.9 3.1E-05 47.6 5.2 33 20-52 3-35 (309)
235 1vpd_A Tartronate semialdehyde 84.5 0.77 2.6E-05 46.8 4.6 32 20-52 6-37 (299)
236 2o7s_A DHQ-SDH PR, bifunctiona 84.5 0.67 2.3E-05 52.2 4.4 35 16-51 361-395 (523)
237 3d3w_A L-xylulose reductase; u 84.4 0.93 3.2E-05 44.4 5.0 35 17-52 5-40 (244)
238 2j6i_A Formate dehydrogenase; 84.4 0.66 2.2E-05 50.0 4.2 36 16-51 161-196 (364)
239 3pp8_A Glyoxylate/hydroxypyruv 84.4 0.73 2.5E-05 48.8 4.5 37 15-52 135-171 (315)
240 2cuk_A Glycerate dehydrogenase 84.3 0.81 2.8E-05 48.2 4.7 36 16-52 141-176 (311)
241 3l6d_A Putative oxidoreductase 84.3 0.78 2.7E-05 47.7 4.6 34 18-52 8-41 (306)
242 2vou_A 2,6-dihydroxypyridine h 84.3 0.85 2.9E-05 48.4 4.9 34 19-53 5-38 (397)
243 3ius_A Uncharacterized conserv 84.2 0.83 2.8E-05 45.7 4.6 32 19-51 5-36 (286)
244 4b1b_A TRXR, thioredoxin reduc 84.2 0.92 3.2E-05 51.4 5.5 33 20-53 224-256 (542)
245 1dxy_A D-2-hydroxyisocaproate 84.2 0.93 3.2E-05 48.2 5.2 36 16-52 142-177 (333)
246 3fg2_P Putative rubredoxin red 84.1 0.94 3.2E-05 48.4 5.2 35 19-53 1-36 (404)
247 4dll_A 2-hydroxy-3-oxopropiona 84.1 0.78 2.7E-05 48.0 4.5 34 18-52 30-63 (320)
248 1cyd_A Carbonyl reductase; sho 84.0 1 3.4E-05 44.1 5.0 35 17-52 5-40 (244)
249 2cvz_A Dehydrogenase, 3-hydrox 84.0 0.67 2.3E-05 46.8 3.9 30 20-51 2-31 (289)
250 1x0v_A GPD-C, GPDH-C, glycerol 84.0 0.47 1.6E-05 49.7 2.8 34 19-52 8-47 (354)
251 2aef_A Calcium-gated potassium 84.0 0.35 1.2E-05 47.8 1.7 33 18-52 8-40 (234)
252 3vps_A TUNA, NAD-dependent epi 84.0 0.98 3.3E-05 45.6 5.1 37 16-53 4-41 (321)
253 2oln_A NIKD protein; flavoprot 84.0 0.98 3.3E-05 47.6 5.2 34 20-54 5-38 (397)
254 1xdw_A NAD+-dependent (R)-2-hy 84.0 0.83 2.8E-05 48.5 4.7 36 16-52 143-178 (331)
255 1oju_A MDH, malate dehydrogena 83.9 0.98 3.4E-05 47.3 5.1 33 20-52 1-34 (294)
256 3ba1_A HPPR, hydroxyphenylpyru 83.9 0.73 2.5E-05 49.1 4.2 36 16-52 161-196 (333)
257 2pv7_A T-protein [includes: ch 83.8 0.82 2.8E-05 47.3 4.5 32 20-52 22-54 (298)
258 2aqj_A Tryptophan halogenase, 83.7 0.97 3.3E-05 50.4 5.3 35 19-54 5-42 (538)
259 1yb4_A Tartronic semialdehyde 83.7 0.61 2.1E-05 47.4 3.4 30 20-50 4-33 (295)
260 2pi1_A D-lactate dehydrogenase 83.6 1 3.5E-05 48.0 5.2 35 16-51 138-172 (334)
261 3c24_A Putative oxidoreductase 83.6 0.97 3.3E-05 46.1 4.9 31 20-51 12-43 (286)
262 2zcu_A Uncharacterized oxidore 83.6 1.7 5.9E-05 43.2 6.6 30 21-51 1-33 (286)
263 1zej_A HBD-9, 3-hydroxyacyl-CO 83.5 0.97 3.3E-05 47.4 4.9 32 18-51 11-42 (293)
264 1jw9_B Molybdopterin biosynthe 83.5 0.83 2.8E-05 46.4 4.3 39 136-174 63-101 (249)
265 3nep_X Malate dehydrogenase; h 83.5 1 3.5E-05 47.6 5.1 33 20-52 1-34 (314)
266 1y6j_A L-lactate dehydrogenase 83.4 1.1 3.8E-05 47.2 5.3 34 19-52 7-41 (318)
267 1oaa_A Sepiapterin reductase; 83.4 1.6 5.5E-05 43.4 6.3 34 17-51 4-41 (259)
268 2gag_B Heterotetrameric sarcos 83.3 0.9 3.1E-05 47.6 4.6 37 19-55 21-58 (405)
269 4huj_A Uncharacterized protein 83.3 0.82 2.8E-05 45.1 4.1 31 19-50 23-54 (220)
270 3hg7_A D-isomer specific 2-hyd 83.3 0.96 3.3E-05 48.2 4.8 36 16-52 137-172 (324)
271 3ado_A Lambda-crystallin; L-gu 83.2 1.1 3.6E-05 47.8 5.1 93 191-283 83-179 (319)
272 1gdh_A D-glycerate dehydrogena 83.2 0.83 2.8E-05 48.2 4.3 35 16-51 143-177 (320)
273 3ksu_A 3-oxoacyl-acyl carrier 83.2 2.3 7.8E-05 42.8 7.4 34 17-51 9-43 (262)
274 3pdu_A 3-hydroxyisobutyrate de 83.1 0.92 3.1E-05 46.3 4.5 32 20-52 2-33 (287)
275 1l7d_A Nicotinamide nucleotide 83.1 0.91 3.1E-05 48.9 4.6 35 17-52 170-204 (384)
276 1ez4_A Lactate dehydrogenase; 82.9 1.1 3.9E-05 47.2 5.2 33 19-51 5-38 (318)
277 3i3l_A Alkylhalidase CMLS; fla 82.8 0.93 3.2E-05 51.8 4.8 37 17-54 21-57 (591)
278 3awd_A GOX2181, putative polyo 82.8 1.2 4E-05 44.0 5.0 35 17-52 11-46 (260)
279 3ce6_A Adenosylhomocysteinase; 82.7 0.98 3.3E-05 50.9 4.8 35 17-52 272-306 (494)
280 2yq5_A D-isomer specific 2-hyd 82.7 1.2 3.9E-05 47.9 5.2 36 16-52 145-180 (343)
281 3f1l_A Uncharacterized oxidore 82.7 1.3 4.3E-05 44.2 5.2 36 16-52 9-45 (252)
282 4dgs_A Dehydrogenase; structur 82.6 0.88 3E-05 48.8 4.2 35 16-51 168-202 (340)
283 1guz_A Malate dehydrogenase; o 82.6 1.2 4E-05 46.7 5.1 33 20-52 1-34 (310)
284 3f8d_A Thioredoxin reductase ( 82.6 1.2 4.2E-05 44.6 5.1 33 19-52 15-47 (323)
285 2w2k_A D-mandelate dehydrogena 82.6 0.91 3.1E-05 48.5 4.3 35 16-51 160-195 (348)
286 2weu_A Tryptophan 5-halogenase 82.5 0.94 3.2E-05 49.8 4.6 34 20-54 3-39 (511)
287 3ajr_A NDP-sugar epimerase; L- 82.5 4.8 0.00017 40.6 9.6 32 21-52 1-34 (317)
288 2zyd_A 6-phosphogluconate dehy 82.5 0.86 2.9E-05 50.9 4.3 36 15-51 11-46 (480)
289 3l9w_A Glutathione-regulated p 82.5 1.2 4.3E-05 48.6 5.5 33 19-52 4-36 (413)
290 1qp8_A Formate dehydrogenase; 82.4 1 3.5E-05 47.3 4.6 36 16-52 121-156 (303)
291 3g3e_A D-amino-acid oxidase; F 82.4 1.1 3.7E-05 46.5 4.7 34 21-54 2-40 (351)
292 1evy_A Glycerol-3-phosphate de 82.4 0.6 2.1E-05 49.4 2.9 30 21-51 17-46 (366)
293 1mx3_A CTBP1, C-terminal bindi 82.4 0.92 3.2E-05 48.6 4.3 35 16-51 165-199 (347)
294 2x3n_A Probable FAD-dependent 82.3 1.1 3.7E-05 47.4 4.8 34 19-53 6-39 (399)
295 2e4g_A Tryptophan halogenase; 82.3 1.2 4.1E-05 49.9 5.4 35 19-54 25-62 (550)
296 2q0l_A TRXR, thioredoxin reduc 82.2 1.2 4E-05 45.0 4.8 32 21-52 3-34 (311)
297 3axb_A Putative oxidoreductase 82.2 0.77 2.6E-05 49.4 3.6 39 17-55 21-60 (448)
298 3gg9_A D-3-phosphoglycerate de 82.1 1 3.5E-05 48.4 4.6 35 15-50 156-190 (352)
299 1pj5_A N,N-dimethylglycine oxi 82.1 1.1 3.9E-05 52.8 5.3 36 19-54 4-39 (830)
300 1i36_A Conserved hypothetical 82.1 1.1 3.6E-05 45.0 4.4 29 21-50 2-30 (264)
301 3s55_A Putative short-chain de 82.1 0.87 3E-05 46.0 3.8 37 15-52 6-43 (281)
302 3pwk_A Aspartate-semialdehyde 82.1 3 0.0001 45.2 8.1 35 193-228 62-96 (366)
303 1xhc_A NADH oxidase /nitrite r 82.0 1.5 5.2E-05 46.5 5.8 33 19-52 143-175 (367)
304 2qcu_A Aerobic glycerol-3-phos 82.0 1.1 3.9E-05 49.4 5.0 36 19-55 3-38 (501)
305 1xu9_A Corticosteroid 11-beta- 82.0 1.1 3.8E-05 45.4 4.6 36 16-52 25-61 (286)
306 2dkn_A 3-alpha-hydroxysteroid 82.0 1.4 4.9E-05 42.9 5.2 32 20-52 2-34 (255)
307 3b1f_A Putative prephenate deh 81.9 1.3 4.5E-05 45.0 5.1 33 19-51 6-39 (290)
308 3p2y_A Alanine dehydrogenase/p 81.9 1.1 3.6E-05 49.0 4.6 35 17-52 182-216 (381)
309 2i99_A MU-crystallin homolog; 81.9 0.84 2.9E-05 47.8 3.7 35 17-51 133-168 (312)
310 4e21_A 6-phosphogluconate dehy 81.9 1.3 4.3E-05 47.7 5.1 36 16-52 19-54 (358)
311 2ahr_A Putative pyrroline carb 81.8 0.93 3.2E-05 45.3 3.9 31 20-51 4-34 (259)
312 2bgk_A Rhizome secoisolaricire 81.8 1.4 4.9E-05 43.9 5.2 35 16-51 13-48 (278)
313 3ijp_A DHPR, dihydrodipicolina 81.7 1.7 5.9E-05 45.6 6.0 39 191-231 84-122 (288)
314 2o4c_A Erythronate-4-phosphate 81.7 1.2 4.2E-05 48.4 5.0 35 16-51 113-147 (380)
315 3itj_A Thioredoxin reductase 1 81.7 0.85 2.9E-05 46.2 3.6 35 18-53 21-55 (338)
316 3klj_A NAD(FAD)-dependent dehy 81.7 1.8 6.1E-05 46.4 6.3 33 19-52 146-178 (385)
317 1yj8_A Glycerol-3-phosphate de 81.7 0.81 2.8E-05 48.7 3.5 33 20-52 22-60 (375)
318 1z7e_A Protein aRNA; rossmann 81.6 3.8 0.00013 46.9 9.3 36 16-52 312-349 (660)
319 1zcj_A Peroxisomal bifunctiona 81.5 1.1 3.6E-05 49.8 4.5 32 20-52 38-69 (463)
320 2pd6_A Estradiol 17-beta-dehyd 81.4 1.4 4.8E-05 43.6 4.9 35 17-52 5-40 (264)
321 2zqz_A L-LDH, L-lactate dehydr 81.4 1.4 4.7E-05 46.8 5.1 33 19-51 9-42 (326)
322 3oet_A Erythronate-4-phosphate 81.3 1.3 4.5E-05 48.3 5.0 35 16-51 116-150 (381)
323 4e6p_A Probable sorbitol dehyd 81.3 1.5 5.2E-05 43.8 5.2 36 16-52 5-41 (259)
324 3i1j_A Oxidoreductase, short c 81.3 1.2 4.1E-05 43.8 4.4 36 16-52 11-47 (247)
325 3ak4_A NADH-dependent quinucli 81.2 1.4 4.9E-05 43.9 5.0 35 17-52 10-45 (263)
326 2yjz_A Metalloreductase steap4 82.0 0.31 1.1E-05 48.0 0.0 34 17-51 17-50 (201)
327 2y0c_A BCEC, UDP-glucose dehyd 81.1 1.3 4.6E-05 49.3 5.1 34 18-52 7-40 (478)
328 4g65_A TRK system potassium up 81.0 0.61 2.1E-05 51.8 2.3 41 19-60 3-43 (461)
329 2bd0_A Sepiapterin reductase; 81.0 1.5 5.1E-05 42.9 4.9 33 19-51 2-41 (244)
330 3qha_A Putative oxidoreductase 80.9 0.88 3E-05 47.0 3.4 34 19-53 15-48 (296)
331 3k96_A Glycerol-3-phosphate de 80.9 1.2 4E-05 47.8 4.4 33 19-52 29-61 (356)
332 1s6y_A 6-phospho-beta-glucosid 80.8 6.5 0.00022 43.6 10.5 34 19-52 7-45 (450)
333 3rkr_A Short chain oxidoreduct 80.8 1.1 3.7E-05 45.0 3.9 36 16-52 26-62 (262)
334 3lzw_A Ferredoxin--NADP reduct 80.8 1.4 4.7E-05 44.5 4.8 33 19-52 7-39 (332)
335 2bry_A NEDD9 interacting prote 80.8 1.5 5.1E-05 48.7 5.4 33 19-52 92-124 (497)
336 1dih_A Dihydrodipicolinate red 80.7 1.6 5.3E-05 45.2 5.2 39 191-231 68-106 (273)
337 3c4n_A Uncharacterized protein 80.7 1.4 4.6E-05 47.2 4.9 35 20-55 37-73 (405)
338 3gg2_A Sugar dehydrogenase, UD 80.6 1.4 4.9E-05 48.7 5.1 32 20-52 3-34 (450)
339 4g2n_A D-isomer specific 2-hyd 80.6 1.1 3.9E-05 48.0 4.2 35 16-51 170-204 (345)
340 2qyt_A 2-dehydropantoate 2-red 80.6 1.2 4.1E-05 45.5 4.2 31 20-50 9-44 (317)
341 4gcm_A TRXR, thioredoxin reduc 80.5 1.1 3.8E-05 45.5 4.0 33 17-50 143-175 (312)
342 4fc7_A Peroxisomal 2,4-dienoyl 80.5 1.4 4.8E-05 44.7 4.7 36 16-52 24-60 (277)
343 1mv8_A GMD, GDP-mannose 6-dehy 80.5 1.2 4.3E-05 48.6 4.6 31 21-52 2-32 (436)
344 4dio_A NAD(P) transhydrogenase 80.5 1.3 4.3E-05 48.8 4.6 35 17-52 188-222 (405)
345 2ydy_A Methionine adenosyltran 80.5 1.3 4.3E-05 45.0 4.3 32 19-51 2-34 (315)
346 3n58_A Adenosylhomocysteinase; 80.5 1.3 4.5E-05 49.4 4.7 35 17-52 245-279 (464)
347 2zbw_A Thioredoxin reductase; 80.4 1.5 5.2E-05 44.7 5.0 33 19-52 5-37 (335)
348 3h9u_A Adenosylhomocysteinase; 80.4 1.3 4.6E-05 49.0 4.8 35 17-52 209-243 (436)
349 1o5i_A 3-oxoacyl-(acyl carrier 80.4 1.3 4.6E-05 44.1 4.4 40 13-53 13-53 (249)
350 3h7a_A Short chain dehydrogena 80.4 1.5 5.2E-05 43.8 4.8 35 17-52 5-40 (252)
351 3rd5_A Mypaa.01249.C; ssgcid, 80.4 1.6 5.4E-05 44.4 5.0 36 16-52 13-49 (291)
352 2iz1_A 6-phosphogluconate dehy 80.3 1.2 4.1E-05 49.4 4.4 32 19-51 5-36 (474)
353 2xxj_A L-LDH, L-lactate dehydr 80.3 1.6 5.4E-05 45.9 5.1 33 20-52 1-34 (310)
354 3h8v_A Ubiquitin-like modifier 80.3 0.61 2.1E-05 49.0 1.9 39 137-176 69-107 (292)
355 2gqw_A Ferredoxin reductase; f 80.3 2.5 8.6E-05 45.3 6.8 33 19-52 145-177 (408)
356 2zat_A Dehydrogenase/reductase 80.3 1.4 4.6E-05 44.0 4.4 36 16-52 11-47 (260)
357 2rgh_A Alpha-glycerophosphate 80.3 1.9 6.4E-05 48.9 6.1 36 19-55 32-67 (571)
358 3l6e_A Oxidoreductase, short-c 80.2 1.8 6.3E-05 42.7 5.3 34 18-52 2-36 (235)
359 3ppi_A 3-hydroxyacyl-COA dehyd 80.2 1.5 5.2E-05 44.1 4.8 36 16-52 27-63 (281)
360 3cty_A Thioredoxin reductase; 80.2 1.6 5.6E-05 44.3 5.1 33 19-52 16-48 (319)
361 4g65_A TRK system potassium up 80.2 6.6 0.00023 43.4 10.3 36 191-226 296-331 (461)
362 4eso_A Putative oxidoreductase 80.1 1.8 6.1E-05 43.4 5.2 36 16-52 5-41 (255)
363 3gvp_A Adenosylhomocysteinase 80.1 1.4 4.8E-05 48.8 4.8 35 17-52 218-252 (435)
364 2g76_A 3-PGDH, D-3-phosphoglyc 80.0 1.2 4.2E-05 47.4 4.2 34 16-50 162-195 (335)
365 4e5n_A Thermostable phosphite 80.0 0.91 3.1E-05 48.3 3.2 35 16-51 142-176 (330)
366 4dqx_A Probable oxidoreductase 79.9 1.7 5.9E-05 44.2 5.1 35 17-52 25-60 (277)
367 3ktd_A Prephenate dehydrogenas 79.8 1.6 5.4E-05 46.7 5.0 32 20-52 9-40 (341)
368 1v8b_A Adenosylhomocysteinase; 79.8 1.4 4.8E-05 49.4 4.7 36 16-52 254-289 (479)
369 3ai3_A NADPH-sorbose reductase 79.8 1.7 5.9E-05 43.3 5.0 35 17-52 5-40 (263)
370 3rwb_A TPLDH, pyridoxal 4-dehy 79.8 1.5 5.3E-05 43.5 4.6 36 16-52 3-39 (247)
371 3v76_A Flavoprotein; structura 79.8 1.5 5.2E-05 47.7 5.0 34 19-53 27-60 (417)
372 3nyc_A D-arginine dehydrogenas 79.8 1.3 4.4E-05 45.8 4.2 34 19-54 9-43 (381)
373 3fef_A Putative glucosidase LP 79.7 1.2 4E-05 49.6 4.1 32 191-222 71-104 (450)
374 2ejw_A HDH, homoserine dehydro 79.7 4.6 0.00016 43.0 8.5 32 195-226 66-97 (332)
375 3e03_A Short chain dehydrogena 79.6 1.7 5.9E-05 43.9 5.0 36 17-53 4-40 (274)
376 1hdc_A 3-alpha, 20 beta-hydrox 79.6 1.7 5.7E-05 43.4 4.8 35 17-52 3-38 (254)
377 2r00_A Aspartate-semialdehyde 79.5 5.6 0.00019 42.2 9.2 36 192-228 62-97 (336)
378 4a5l_A Thioredoxin reductase; 79.5 1.2 4.1E-05 44.9 3.8 32 18-50 151-182 (314)
379 3pk0_A Short-chain dehydrogena 79.5 1.3 4.5E-05 44.5 4.0 35 17-52 8-43 (262)
380 3mog_A Probable 3-hydroxybutyr 79.5 1.6 5.3E-05 48.9 5.0 33 19-52 5-37 (483)
381 1w6u_A 2,4-dienoyl-COA reducta 79.4 1.8 6.3E-05 43.8 5.2 35 16-51 23-58 (302)
382 1h5q_A NADP-dependent mannitol 79.4 1.3 4.4E-05 43.8 3.9 34 17-51 12-46 (265)
383 1eq2_A ADP-L-glycero-D-mannohe 79.4 1.6 5.6E-05 43.8 4.7 32 21-52 1-33 (310)
384 2jah_A Clavulanic acid dehydro 79.4 2 6.7E-05 42.7 5.2 34 17-51 5-39 (247)
385 4ea9_A Perosamine N-acetyltran 79.3 2 6.7E-05 42.2 5.2 35 18-52 11-45 (220)
386 2gv8_A Monooxygenase; FMO, FAD 79.3 1.5 5.1E-05 47.5 4.7 34 19-52 6-40 (447)
387 3c4a_A Probable tryptophan hyd 79.3 1.7 5.7E-05 45.9 5.0 33 20-53 1-35 (381)
388 3dii_A Short-chain dehydrogena 79.3 2 7E-05 42.6 5.3 33 19-52 2-35 (247)
389 1ooe_A Dihydropteridine reduct 79.2 1.4 4.9E-05 43.2 4.1 35 18-53 2-37 (236)
390 1fmc_A 7 alpha-hydroxysteroid 79.2 1.2 4E-05 43.8 3.5 34 17-51 9-43 (255)
391 3rih_A Short chain dehydrogena 79.2 1.3 4.4E-05 45.7 4.0 35 17-52 39-74 (293)
392 3n74_A 3-ketoacyl-(acyl-carrie 79.1 1.7 5.8E-05 43.2 4.7 35 17-52 7-42 (261)
393 1yo6_A Putative carbonyl reduc 79.1 1.2 4E-05 43.4 3.5 35 18-52 2-38 (250)
394 3tz6_A Aspartate-semialdehyde 79.1 5.7 0.0002 42.6 9.1 37 192-229 60-96 (344)
395 2eq6_A Pyruvate dehydrogenase 79.1 1.6 5.6E-05 47.6 5.0 32 20-52 170-201 (464)
396 3h8l_A NADH oxidase; membrane 79.1 1.7 5.8E-05 46.3 5.0 33 20-53 2-37 (409)
397 3hsk_A Aspartate-semialdehyde 79.1 3.9 0.00013 44.5 7.8 35 192-227 90-124 (381)
398 1rp0_A ARA6, thiazole biosynth 79.0 1.5 5.2E-05 44.6 4.4 35 18-53 38-73 (284)
399 3tzq_B Short-chain type dehydr 79.0 2 6.8E-05 43.4 5.2 36 16-52 8-44 (271)
400 2wsb_A Galactitol dehydrogenas 79.0 1.9 6.5E-05 42.3 5.0 34 17-51 9-43 (254)
401 3k6j_A Protein F01G10.3, confi 78.9 1.7 5.8E-05 48.5 5.1 32 20-52 55-86 (460)
402 2q7v_A Thioredoxin reductase; 78.8 1.8 6.3E-05 44.0 5.0 33 19-52 8-40 (325)
403 1pgj_A 6PGDH, 6-PGDH, 6-phosph 78.8 1.6 5.4E-05 48.6 4.8 32 20-52 2-33 (478)
404 3jtm_A Formate dehydrogenase, 78.8 1.2 4E-05 47.9 3.6 35 16-51 161-195 (351)
405 3p19_A BFPVVD8, putative blue 78.8 2 6.8E-05 43.4 5.2 37 15-52 12-49 (266)
406 2dtx_A Glucose 1-dehydrogenase 78.7 2.1 7.3E-05 43.0 5.4 35 17-52 6-41 (264)
407 2gas_A Isoflavone reductase; N 78.7 1.8 6.1E-05 43.7 4.8 33 19-52 2-35 (307)
408 3lyl_A 3-oxoacyl-(acyl-carrier 78.7 1.6 5.6E-05 42.9 4.4 34 17-51 3-37 (247)
409 1yb1_A 17-beta-hydroxysteroid 78.7 1.9 6.6E-05 43.3 5.0 35 17-52 29-64 (272)
410 2d1y_A Hypothetical protein TT 78.6 2 7E-05 42.7 5.1 35 17-52 4-39 (256)
411 3ijr_A Oxidoreductase, short c 78.6 2 6.8E-05 44.0 5.1 36 16-52 44-80 (291)
412 3afn_B Carbonyl reductase; alp 78.6 1.6 5.6E-05 42.7 4.4 35 17-52 5-40 (258)
413 4fgs_A Probable dehydrogenase 78.5 1.5 5.3E-05 45.3 4.3 43 9-52 19-62 (273)
414 3orf_A Dihydropteridine reduct 78.5 1.9 6.3E-05 43.0 4.8 41 12-53 15-56 (251)
415 3kd9_A Coenzyme A disulfide re 78.5 1.9 6.3E-05 46.8 5.1 36 18-53 2-38 (449)
416 2ag5_A DHRS6, dehydrogenase/re 78.5 1.7 5.7E-05 43.0 4.4 35 17-52 4-39 (246)
417 3nkl_A UDP-D-quinovosamine 4-d 78.4 1.4 4.8E-05 39.8 3.5 34 19-52 4-38 (141)
418 1mxh_A Pteridine reductase 2; 78.4 1.6 5.6E-05 43.7 4.4 37 14-51 6-43 (276)
419 3uf0_A Short-chain dehydrogena 78.4 1.8 6.2E-05 43.9 4.7 33 17-50 29-62 (273)
420 3f9i_A 3-oxoacyl-[acyl-carrier 78.3 1.5 5.1E-05 43.2 4.0 35 16-51 11-46 (249)
421 3grp_A 3-oxoacyl-(acyl carrier 78.3 0.87 3E-05 46.1 2.3 42 9-51 17-59 (266)
422 3pxx_A Carveol dehydrogenase; 78.3 2.2 7.4E-05 42.9 5.2 36 16-52 7-43 (287)
423 2qa1_A PGAE, polyketide oxygen 78.2 1.9 6.6E-05 47.8 5.3 35 18-53 10-44 (500)
424 2gqw_A Ferredoxin reductase; f 78.2 2 6.9E-05 46.1 5.3 36 18-53 6-42 (408)
425 2ae2_A Protein (tropinone redu 78.2 2.1 7.1E-05 42.7 5.0 35 17-52 7-42 (260)
426 2pgd_A 6-phosphogluconate dehy 78.1 1.7 5.8E-05 48.3 4.8 32 20-52 3-34 (482)
427 1nff_A Putative oxidoreductase 78.1 2.2 7.5E-05 42.8 5.2 35 17-52 5-40 (260)
428 1gq2_A Malic enzyme; oxidoredu 78.1 1.8 6E-05 49.3 4.8 40 15-54 278-327 (555)
429 3g79_A NDP-N-acetyl-D-galactos 78.1 1.7 5.9E-05 48.6 4.8 42 12-53 11-53 (478)
430 1q1r_A Putidaredoxin reductase 78.1 2 6.8E-05 46.5 5.2 35 19-53 4-39 (431)
431 3v8b_A Putative dehydrogenase, 78.0 2.2 7.4E-05 43.6 5.2 35 16-51 25-60 (283)
432 1vl8_A Gluconate 5-dehydrogena 78.0 2.1 7E-05 43.2 5.0 37 15-52 17-54 (267)
433 3un1_A Probable oxidoreductase 78.0 1.8 6.2E-05 43.5 4.6 38 16-54 25-63 (260)
434 3atr_A Conserved archaeal prot 78.0 1.2 4.1E-05 48.4 3.4 34 19-53 6-39 (453)
435 2o23_A HADH2 protein; HSD17B10 77.9 2.2 7.4E-05 42.2 5.0 35 17-52 10-45 (265)
436 3zv4_A CIS-2,3-dihydrobiphenyl 77.9 2.2 7.6E-05 43.3 5.2 35 17-52 3-38 (281)
437 1yxm_A Pecra, peroxisomal tran 77.8 2.2 7.6E-05 43.3 5.2 35 16-51 15-50 (303)
438 4gx0_A TRKA domain protein; me 77.8 7 0.00024 43.8 9.7 35 20-55 349-383 (565)
439 2ew8_A (S)-1-phenylethanol deh 77.8 2.3 7.7E-05 42.2 5.1 35 17-52 5-40 (249)
440 3ihg_A RDME; flavoenzyme, anth 77.8 1.5 5.2E-05 48.6 4.2 35 19-54 5-39 (535)
441 3qlj_A Short chain dehydrogena 77.7 0.97 3.3E-05 46.9 2.5 38 14-52 22-60 (322)
442 4hy3_A Phosphoglycerate oxidor 77.7 1.3 4.5E-05 47.9 3.6 34 16-50 173-206 (365)
443 3qj4_A Renalase; FAD/NAD(P)-bi 77.7 1.3 4.6E-05 45.7 3.5 32 20-52 2-36 (342)
444 3pvc_A TRNA 5-methylaminomethy 77.6 1.7 5.7E-05 50.2 4.7 33 19-52 264-296 (689)
445 3e9n_A Putative short-chain de 77.6 1.7 5.8E-05 42.9 4.1 33 17-51 3-36 (245)
446 2v6g_A Progesterone 5-beta-red 77.5 4 0.00014 42.0 7.2 33 20-52 2-39 (364)
447 3gaf_A 7-alpha-hydroxysteroid 77.5 1.6 5.4E-05 43.7 3.9 34 17-51 10-44 (256)
448 3ftp_A 3-oxoacyl-[acyl-carrier 77.5 1.7 5.8E-05 44.1 4.2 35 16-51 25-60 (270)
449 2cdc_A Glucose dehydrogenase g 77.4 1.9 6.5E-05 45.6 4.7 33 19-52 181-213 (366)
450 2bc0_A NADH oxidase; flavoprot 77.4 2.8 9.5E-05 46.1 6.2 34 18-52 193-226 (490)
451 4imr_A 3-oxoacyl-(acyl-carrier 77.4 1.9 6.3E-05 43.9 4.5 39 12-51 26-65 (275)
452 3ek2_A Enoyl-(acyl-carrier-pro 77.4 1.8 6.1E-05 43.0 4.3 36 15-51 10-48 (271)
453 3sx2_A Putative 3-ketoacyl-(ac 77.4 2.1 7E-05 43.1 4.8 36 16-52 10-46 (278)
454 2pnf_A 3-oxoacyl-[acyl-carrier 77.4 1.7 5.7E-05 42.5 4.0 34 17-51 5-39 (248)
455 1zk7_A HGII, reductase, mercur 77.4 2.2 7.6E-05 46.4 5.4 33 19-52 4-36 (467)
456 2wyu_A Enoyl-[acyl carrier pro 77.3 2.1 7E-05 42.9 4.7 35 17-52 6-43 (261)
457 2cfc_A 2-(R)-hydroxypropyl-COM 77.3 2.5 8.5E-05 41.4 5.2 33 19-52 2-35 (250)
458 3gem_A Short chain dehydrogena 77.3 2 6.7E-05 43.3 4.6 36 16-52 24-60 (260)
459 3lxd_A FAD-dependent pyridine 77.2 1.9 6.4E-05 46.2 4.6 35 19-53 9-44 (415)
460 3r9u_A Thioredoxin reductase; 77.2 2.3 7.8E-05 42.6 5.0 34 20-54 5-39 (315)
461 1qyc_A Phenylcoumaran benzylic 77.2 2 6.8E-05 43.3 4.6 32 19-51 4-36 (308)
462 2p4q_A 6-phosphogluconate dehy 77.1 2 6.7E-05 48.2 4.9 34 18-52 9-42 (497)
463 3gvc_A Oxidoreductase, probabl 77.1 1.6 5.3E-05 44.6 3.8 36 16-52 26-62 (277)
464 3v2h_A D-beta-hydroxybutyrate 77.0 2 6.8E-05 43.8 4.6 36 15-51 21-57 (281)
465 3k7m_X 6-hydroxy-L-nicotine ox 77.0 2.1 7.1E-05 45.5 4.9 33 21-54 3-36 (431)
466 1xq1_A Putative tropinone redu 77.0 1.7 5.9E-05 43.2 4.0 35 17-52 12-47 (266)
467 3guy_A Short-chain dehydrogena 76.9 2.6 8.8E-05 41.1 5.2 32 20-52 2-34 (230)
468 2pd4_A Enoyl-[acyl-carrier-pro 76.9 1.9 6.4E-05 43.5 4.3 35 17-52 4-41 (275)
469 1mld_A Malate dehydrogenase; o 76.9 1.7 5.9E-05 45.7 4.1 34 20-53 1-36 (314)
470 2gqf_A Hypothetical protein HI 76.9 1.7 6E-05 46.8 4.3 34 19-53 4-37 (401)
471 2rhc_B Actinorhodin polyketide 76.9 2.5 8.5E-05 42.8 5.2 35 17-52 20-55 (277)
472 1nhp_A NADH peroxidase; oxidor 76.8 3.3 0.00011 44.7 6.5 34 18-52 148-181 (447)
473 3d1c_A Flavin-containing putat 76.8 2 6.8E-05 44.3 4.6 35 17-52 164-198 (369)
474 3imf_A Short chain dehydrogena 76.8 1.6 5.5E-05 43.6 3.7 36 16-52 3-39 (257)
475 1zk4_A R-specific alcohol dehy 76.8 1.6 5.5E-05 42.8 3.7 35 17-52 4-39 (251)
476 1cjc_A Protein (adrenodoxin re 76.8 1.7 5.9E-05 47.8 4.3 35 18-52 144-198 (460)
477 2qq5_A DHRS1, dehydrogenase/re 76.8 2 6.8E-05 42.9 4.4 35 17-52 3-38 (260)
478 3ef6_A Toluene 1,2-dioxygenase 76.8 2.5 8.4E-05 45.4 5.4 34 20-53 3-37 (410)
479 1ae1_A Tropinone reductase-I; 76.7 2.4 8.2E-05 42.7 5.0 35 17-52 19-54 (273)
480 3k5p_A D-3-phosphoglycerate de 76.7 2.1 7.1E-05 47.2 4.9 36 16-52 153-188 (416)
481 1d7o_A Enoyl-[acyl-carrier pro 76.7 2 6.8E-05 43.7 4.5 33 17-50 6-41 (297)
482 3h28_A Sulfide-quinone reducta 76.7 2.3 8E-05 45.7 5.2 33 20-52 3-36 (430)
483 3l77_A Short-chain alcohol deh 76.6 2.3 8E-05 41.4 4.8 33 19-52 2-35 (235)
484 1dlj_A UDP-glucose dehydrogena 76.6 1.6 5.5E-05 47.3 3.9 30 21-52 2-31 (402)
485 3fmw_A Oxygenase; mithramycin, 76.6 2.1 7.1E-05 48.6 5.0 35 19-54 49-83 (570)
486 2a4k_A 3-oxoacyl-[acyl carrier 76.5 2.6 8.8E-05 42.5 5.2 35 17-52 4-39 (263)
487 3c1o_A Eugenol synthase; pheny 76.5 2.3 7.8E-05 43.3 4.8 32 19-51 4-36 (321)
488 3e1t_A Halogenase; flavoprotei 76.5 2.5 8.5E-05 46.8 5.5 35 19-54 7-41 (512)
489 3r1i_A Short-chain type dehydr 76.4 2.4 8.1E-05 43.1 5.0 36 16-52 29-65 (276)
490 1ebd_A E3BD, dihydrolipoamide 76.4 2.3 7.9E-05 46.1 5.2 33 19-52 170-202 (455)
491 2yyy_A Glyceraldehyde-3-phosph 76.4 2.5 8.5E-05 45.3 5.3 38 191-228 77-114 (343)
492 4fs3_A Enoyl-[acyl-carrier-pro 76.4 2.2 7.5E-05 43.0 4.6 35 17-52 4-41 (256)
493 1vdc_A NTR, NADPH dependent th 76.4 1.8 6.3E-05 44.0 4.1 32 19-51 8-39 (333)
494 1uay_A Type II 3-hydroxyacyl-C 76.3 2.8 9.6E-05 40.6 5.3 34 19-53 2-36 (242)
495 2fwm_X 2,3-dihydro-2,3-dihydro 76.3 2.5 8.6E-05 41.9 5.0 35 17-52 5-40 (250)
496 1v59_A Dihydrolipoamide dehydr 76.3 2.2 7.5E-05 46.5 5.0 33 19-52 183-215 (478)
497 2qa2_A CABE, polyketide oxygen 76.3 2 6.7E-05 47.7 4.6 35 18-53 11-45 (499)
498 1sny_A Sniffer CG10964-PA; alp 76.3 1.7 5.9E-05 43.0 3.8 38 15-52 17-57 (267)
499 3ab1_A Ferredoxin--NADP reduct 76.2 2.2 7.6E-05 44.2 4.8 33 19-52 14-46 (360)
500 4iiu_A 3-oxoacyl-[acyl-carrier 76.2 1.6 5.6E-05 43.7 3.6 32 14-45 21-53 (267)
No 1
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=100.00 E-value=3.7e-113 Score=980.95 Aligned_cols=530 Identities=52% Similarity=0.881 Sum_probs=428.2
Q ss_pred cccccCHHHHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHHHHhhh
Q psy9783 5 IPGVFEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARNSALN 84 (726)
Q Consensus 5 ~~~~~g~~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~~~l~~ 84 (726)
|+++||.++|++|++++|+||||||+||++|++|+++|||+|+|+|+|+|+.|||+|||||+.+|||++||++|+++|++
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~ 82 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQ 82 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHT
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999965555
Q ss_pred cCCCCceeeeeccccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcchhhhHH
Q psy9783 85 FNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSKAQVAR 164 (726)
Q Consensus 85 ~np~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk~~~ak 164 (726)
+|
T Consensus 83 iN------------------------------------------------------------------------------ 84 (640)
T 1y8q_B 83 FY------------------------------------------------------------------------------ 84 (640)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred HC------------------------------------------------------------------------------
Confidence 54
Q ss_pred HHHHhhCCCCeEEEEecccccccccccccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCccceEEEEeCCCCc
Q psy9783 165 NSALNFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGYEGQVELIKKGETK 244 (726)
Q Consensus 165 ~~~~~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~~G~v~~i~p~~t~ 244 (726)
|+++|+++..++++..+..+|+.++|+||+|+||+++|.++|++|+.+++|+|++|+.|+.|++.++.|+.++
T Consensus 85 -------P~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~~t~ 157 (640)
T 1y8q_B 85 -------PKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKGVTE 157 (640)
T ss_dssp -------TTCEEEEEESCTTSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTTTSC
T ss_pred -------CCCeEEEEecccchhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCCCCC
Confidence 5556666666666655667889999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCCCCCCCCCCccccCCCCCcchhhhhHhHHhHHHHHHHhhhcchhHHHHHHHHhhhhhhhhhcccchHHHHHHHh
Q psy9783 245 CYECDPKPAAKTYPGCTIRNTPSEPIHCIVWAKHLFNYLERLMLMKRCPLILKIQKLLERLSAMNVIRSQLPKLIQAVQL 324 (726)
Q Consensus 245 cy~C~~~~~~~~~p~Cti~~~p~~~~h~i~~a~~lf~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 324 (726)
||+|.+.++++++|.||++++|+.|+|||+||+++|+.||+. ....+++ .++
T Consensus 158 Cy~C~~~p~~~~~p~Cti~~~p~~~~hci~~a~~~f~~lf~~-----------------~~~~~~~----~~~------- 209 (640)
T 1y8q_B 158 CYECHPKPTQRTFPGATIRNTPSEPIHCIVWAKYLFNQLFGE-----------------EDADQEV----SPD------- 209 (640)
T ss_dssp CTTSSCCCCCCCCCTTTTTSCCCSHHHHHHHHHHHHHHHHSC-----------------CCGGGCC----SCC-------
T ss_pred CcccCCCCCCcccceeeecCCCCchHHHHHHHHHHHHHHhCC-----------------cchhhhh----ccc-------
Confidence 999999888899999999999999999999999999999993 2222222 111
Q ss_pred hhccCCccccccccccccchhhhhHhhhhhhhcCCccccccccchhhcccchH-HHHHHHhHHHHHHHHcCCcccCCCCC
Q psy9783 325 GILRLNPFTVLSGLNICSSDAGAKAAASEATANGDVVRTSTRAWASACGYDPR-KLFAKFFDADIRYLISMSDLWKTRKA 403 (726)
Q Consensus 325 G~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~w~~~c~~~~~-~~f~~~F~~~I~~Ll~~~~~w~~~~~ 403 (726)
..+|+.... ......+.......+.+.+...+.|+ .|+.||+ .+|+++|+++|++||+|++||+++|+
T Consensus 210 ---~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~~f~k~F~~~I~~Ll~~~~fW~~kr~ 278 (640)
T 1y8q_B 210 ---RADPEAAWE-------PTEAEARARASNEDGDIKRISTKEWA-KSTGYDPVKLFTKLFKDDIRYLLTMDKLWRKRKP 278 (640)
T ss_dssp ---TTCTTSCCC----------------------------CHHHH-HHTTSCHHHHHHHHHTHHHHHHTTCGGGCSSSCC
T ss_pred ---ccchhhhhh-------hhhhhhhhhhhhhhhHHHHHhhhhHH-HhHhHHHHHHHHHHHhhHHHHHHhCcccccCCCC
Confidence 123322100 00001111122233445555567897 6777776 59999999999999999999999999
Q ss_pred CCCcccCCCch-hhcCC-Cc--ccCCCCCCcccccChHHHHHHHHHHHHHHHHHhhhhhccCCCccccCCChhhHHHHHH
Q psy9783 404 PQPLVWDTLSD-AVAGS-SK--ETDGGGLKDQRVWSVAECARVFERSVRELKTKFDAAVEKDEHLVWDKDDKPAMDFVAA 479 (726)
Q Consensus 404 P~pl~~~~~~~-~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~f~~s~~~L~~~l~~~~~~~~~l~FDKDDd~hmDFVtA 479 (726)
|+||.||.... +.... .. .....+++++++|++.++.++|.+++++|.+++.. .....+++|||||+.|||||+|
T Consensus 279 P~pl~fd~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~FdKDDd~h~dFV~a 357 (640)
T 1y8q_B 279 PVPLDWAEVQSQGEETNASDQQNEPQLGLKDQQVLDVKSYARLFSKSIETLRVHLAE-KGDGAELIWDKDDPSAMDFVTS 357 (640)
T ss_dssp CCCCCHHHHHHC--------------CCCGGGSCCCHHHHHHHHHHHHHHHHHHHHH-TCTTCCCCCCTTCHHHHHHHHH
T ss_pred CCCcccCccccccccccccccccccccCCChhhhcChhhhhhhHHHHHHHHHHHhhh-cccCCCcccCCCCHHHHHHHHH
Confidence 99999998643 22111 00 01235778899999999999999999999999876 3457799999999999999999
Q ss_pred HHHHhHHhcCCCCCCHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhcccchhhhccCCCCCCccccccccCCC
Q psy9783 480 CANIRAHVFSIPEKSRFDIKSMAGNIIPAIATSNAIVAGLVVLHAIHVLQARFSSCQTVYLRKKPNHRDQMIVPEKYLTA 559 (726)
Q Consensus 480 AANLRA~nY~Ip~~s~~~vK~IAGnIIPAIATTnAIVAGLvvlEl~KlL~~k~e~~rn~flnl~pn~~~~~~vP~~~~~e 559 (726)
||||||+||+||++|||++|+|||||||||||||||||||+|+|+||++++.++.|||+|+|++++++++++.+ ..+.+
T Consensus 358 aaNlRA~~y~I~~~~~~~~K~iAG~IIPAIATTnAiVaGl~~lE~~Kvl~~~~~~~kn~f~n~a~~~~~~~~~~-~~p~~ 436 (640)
T 1y8q_B 358 AANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVP-CALDP 436 (640)
T ss_dssp HHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHTTCGGGCEEEEECSSCCTTSEEEEE-EECCC
T ss_pred HHHHHHHHcCCCcCCHHHHHHHhCCcccchhhHHHHHHHHHHHHHHHHHhccHHhhhhhheeeccCCCCcEEee-cccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888888 67789
Q ss_pred CCCCCCCCCCCCeEEEEEECCCCcHHHHHHHHHhcccCCccceeEEE-ecCCeEEEeccccccccccCCchhhh-h----
Q psy9783 560 PNPTCPVCSPKPQRTIGLDVTKMTVAEFEEAVLKKTLNMSAMVDVMV-EASGSVIISSEEGETEANNDKPLEHG-L---- 633 (726)
Q Consensus 560 Pnp~C~vC~~~~~~tl~id~~~~TL~~lid~ilk~~l~m~~~pdV~~-~~~G~ll~ss~e~e~~~nl~k~L~el-v---- 633 (726)
|+|+|++|+..+++++++++++|||++|+++|++++|||.. |.|+. .+.+++||+++++++++||+|+|+|+ |
T Consensus 437 p~~~c~vc~~~~~~~~~~~~~~~TL~~li~~~~~~~~~l~~-~~is~~~~~~~~ly~~~~~~~~~~l~~~l~el~v~~~~ 515 (640)
T 1y8q_B 437 PNPNCYVCASKPEVTVRLNVHKVTVLTLQDKIVKEKFAMVA-PDVQIEDGKGTILISSEEGETEANNHKKLSEFGIRNGS 515 (640)
T ss_dssp CCTTCTTTSSSCEEEEEECTTTCBHHHHHHCCCCCCTCCSS-CEEEESSSSCCEEECSSSSSSTTGGGSBGGGGTCCTTC
T ss_pred CCCCCcccCCccEEEEEEeCCCCcHHHHHHHHHHHhhCCCC-ceEEEEcCCCcEEEeccchhhHHhhhCcHHHhCccCCc
Confidence 99999999766788999999999999999998788999998 99988 33458999999899999999999993 2
Q ss_pred ---------------hhcccCCCCCCCeEEEEec-CCCCCCCCc
Q psy9783 634 ---------------IISHRVSARDGPEFEILDQ-KDLPQPPAP 661 (726)
Q Consensus 634 ---------------~v~~~~~~~~~~~feV~~~-~~~~~p~~~ 661 (726)
.+.|+++.++...|+|.++ |.+.+|+++
T Consensus 516 ~~~v~d~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (640)
T 1y8q_B 516 RLQADDFLQDYTLLINILHSEDLGKDVEFEVVGDAPEKVGPKQA 559 (640)
T ss_dssp EEEEEETTTTEEEEEEEEECSCCCTTCCEEETTCC---------
T ss_pred EEEecCCCccEEEEEEEEecCcccCCCCeEEecCCccccCCCcc
Confidence 2345555555567777776 555555544
No 2
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-98 Score=898.03 Aligned_cols=516 Identities=27% Similarity=0.412 Sum_probs=397.3
Q ss_pred CcccccccCHHHHHHHhcCcEEEEcCchHHHHHHHHHHHhCC-----CeEEEEeCCccCccCCCcCCCCCCCccChhHHH
Q psy9783 2 ATKIPGVFEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGF-----SNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQ 76 (726)
Q Consensus 2 ~~~~~~~~g~~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv-----~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~ 76 (726)
+.||+++||.++|++|++++|+||||||+||++|++||++|| |+|+|+|+|+|+.|||||||||+.+|||++||+
T Consensus 408 y~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dvG~~Ka~ 487 (1015)
T 3cmm_A 408 YDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSE 487 (1015)
T ss_dssp THHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHH
T ss_pred hhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccCChhhCCCHHHH
Confidence 568999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCceeeeeccccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccC
Q psy9783 77 VARNSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVG 156 (726)
Q Consensus 77 va~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg 156 (726)
+|+++++++||++..
T Consensus 488 ~aa~~l~~iNP~v~~----------------------------------------------------------------- 502 (1015)
T 3cmm_A 488 VAAEAVCAMNPDLKG----------------------------------------------------------------- 502 (1015)
T ss_dssp HHHHHHHHHCGGGTT-----------------------------------------------------------------
T ss_pred HHHHHHHHHCCCCcc-----------------------------------------------------------------
Confidence 999777766666500
Q ss_pred cchhhhHHHHHHhhCCCCeEEEEeccccc---ccccccccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCccc
Q psy9783 157 KSKAQVARNSALNFNPDANIVAHHTSIIS---ADFGVNYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGYEG 233 (726)
Q Consensus 157 ~sk~~~ak~~~~~~np~~~i~~~~~~i~~---~~~~~~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~~G 233 (726)
+|++++.++.. ..++.+|++++|+||+|+||+++|.++|++|+.+++|+|++|+.|+.|
T Consensus 503 ------------------~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~~g~~G~~G 564 (1015)
T 3cmm_A 503 ------------------KINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTLGTKG 564 (1015)
T ss_dssp ------------------TEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEETTEE
T ss_pred ------------------eEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEEeCCCcccc
Confidence 44444444432 134568899999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCcceecCCCCCCCCCCCccccCCCCCcchhhhhHhHHhHHHHHHHhhhcchhHHHHHHHHhhhhhhhhhcc
Q psy9783 234 QVELIKKGETKCYECDPKPAAKTYPGCTIRNTPSEPIHCIVWAKHLFNYLERLMLMKRCPLILKIQKLLERLSAMNVIRS 313 (726)
Q Consensus 234 ~v~~i~p~~t~cy~C~~~~~~~~~p~Cti~~~p~~~~h~i~~a~~lf~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (726)
+++++.|+.++||+|.++|+++++|+||++++|+.|+|||+||+++|+.||+... +..+.|++..
T Consensus 565 ~v~v~~p~~t~cy~c~~dp~~~~~P~Ctl~~~P~~~~h~i~wa~~~f~~lf~~~~-------~~~~~~l~~~-------- 629 (1015)
T 3cmm_A 565 NTQVIIPRLTESYSSSRDPPEKSIPLCTLRSFPNKIDHTIAWAKSLFQGYFTDSA-------ENVNMYLTQP-------- 629 (1015)
T ss_dssp EEEEECTTTBCCGGGSCCCCCCCCCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHH-------HHHHHHHHCT--------
T ss_pred ceEEEeCCCCCccCCCCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHHHHhhhh-------hhhhhhccCc--------
Confidence 9999999999999999988889999999999999999999999999999999532 2222333211
Q ss_pred cchHHHHHHHhhhccCCccccccccccccchhhhhHhhhhhhhcCCccccccccchhhcccchHHHHHHHhHHHHHHHHc
Q psy9783 314 QLPKLIQAVQLGILRLNPFTVLSGLNICSSDAGAKAAASEATANGDVVRTSTRAWASACGYDPRKLFAKFFDADIRYLIS 393 (726)
Q Consensus 314 ~~~~~~~~v~~G~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~w~~~c~~~~~~~f~~~F~~~I~~Ll~ 393 (726)
++.+.+. ..... . ...+..-.. .+ ...++.|. +|+.||+.+|+++|+++|++||+
T Consensus 630 ---~~~~~~~----~~~~~-----------~--~~~l~~~~~---~l-~~~~~~~~-~c~~~a~~~f~~~F~~~I~~Ll~ 684 (1015)
T 3cmm_A 630 ---NFVEQTL----KQSGD-----------V--KGVLESISD---SL-SSKPHNFE-DCIKWARLEFEKKFNHDIKQLLF 684 (1015)
T ss_dssp ---THHHHHH----C---C-----------C--HHHHHHHHH---HH-HSCCSSHH-HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred ---hhHHHHH----hccch-----------h--HHHHHHHHH---Hh-hcCCCcHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111110 00000 0 001100000 01 12245675 89999999999999999999998
Q ss_pred C----------CcccCC-CCCCCCcccCCCchh-h----cCCCcccCCCCCCcc-cccCh-------------------H
Q psy9783 394 M----------SDLWKT-RKAPQPLVWDTLSDA-V----AGSSKETDGGGLKDQ-RVWSV-------------------A 437 (726)
Q Consensus 394 ~----------~~~w~~-~~~P~pl~~~~~~~~-~----~~~~~~~~~~~~~~~-~~~~~-------------------~ 437 (726)
| ++||++ ||+|+||.||..+.. . +.+...+..+|++.+ ..|+. .
T Consensus 685 ~~p~d~~~~~g~~fW~~~kr~P~pl~fd~~~~~h~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~f~~~ 764 (1015)
T 3cmm_A 685 NFPKDAKTSNGEPFWSGAKRAPTPLEFDIYNNDHFHFVVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPEFTPN 764 (1015)
T ss_dssp HSCTTCBCSTTCBSSCTTCCCCCCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSSTTSSCCHHHHHHHHTTCCCCCCCCC
T ss_pred hCCcccccccCcccccCCCCCCCCcccCCCCHHHHHHHHHHHHhHHHhcCCCCccccccCCHHHHHHHHhhCcCCCcCCc
Confidence 7 899999 799999999986431 1 111100111122211 11110 0
Q ss_pred --------------HHHHH-HHHHHHHHHHHhhhhh----ccCCCccccCCChh--hHHHHHHHHHHhHHhcCCCCCCHH
Q psy9783 438 --------------ECARV-FERSVRELKTKFDAAV----EKDEHLVWDKDDKP--AMDFVAACANIRAHVFSIPEKSRF 496 (726)
Q Consensus 438 --------------~~~~~-f~~s~~~L~~~l~~~~----~~~~~l~FDKDDd~--hmDFVtAAANLRA~nY~Ip~~s~~ 496 (726)
+...+ |.+++++|.++++... ....|++||||||. |||||+|||||||+||+||++|||
T Consensus 765 ~~~ki~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~FeKDDd~n~h~dFi~aasNlRa~ny~I~~~~~~ 844 (1015)
T 3cmm_A 765 ANLKIQVNDDDPDPNANAANGSDEIDQLVSSLPDPSTLAGFKLEPVDFEKDDDTNHHIEFITACSNCRAQNYFIETADRQ 844 (1015)
T ss_dssp SSCCCCSSTTSSCC---------CCHHHHTTSCCGGGGTTCCCCCCCCCTTCTTSSHHHHHHHHHHHHHHHTTCCCCCHH
T ss_pred cCceeccchhhhcccccccccHHHHHHHHHHhccchhcccCCCCceeeecCCCchhHHHHHHHHHHHHHHHcCCCccCHH
Confidence 01122 5567778887776532 14678999999997 999999999999999999999999
Q ss_pred HHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhh--hhcccchhhhccCCCCCCccccccccCCCCCCCCCCCCCCCeE-
Q psy9783 497 DIKSMAGNIIPAIATSNAIVAGLVVLHAIHVLQA--RFSSCQTVYLRKKPNHRDQMIVPEKYLTAPNPTCPVCSPKPQR- 573 (726)
Q Consensus 497 ~vK~IAGnIIPAIATTnAIVAGLvvlEl~KlL~~--k~e~~rn~flnl~pn~~~~~~vP~~~~~ePnp~C~vC~~~~~~- 573 (726)
++|+|||||||||||||||||||+|+|+||+|+| +++.|||+|+|++++. +++...+.+|+++|..|. |
T Consensus 845 ~~k~iaG~IIPAIaTT~AivaGl~~lE~~K~~~~~~~~~~~kn~f~nla~~~----~~~~~p~~~~~~~~~~~~----~~ 916 (1015)
T 3cmm_A 845 KTKFIAGRIIPAIATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPF----FGFSEPIASPKGEYNNKK----YD 916 (1015)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHTTCCCGGGCCEEEEETTTTE----EEEECCCBCCEEEETTEE----EE
T ss_pred HHHHHhCCcCccchhHHHHHHHHHHHHHHHHHhcccchhhhhhHHHhccCCc----eeecCCCCCCCCCCCCCC----CC
Confidence 9999999999999999999999999999999998 6999999999998642 233233445556676553 3
Q ss_pred EE--EEECC-CCcHHHHHHHHHhcccCCccceeEEEecCC-eEEEecccc--ccccccCCchhhhhhhcccC---CCCCC
Q psy9783 574 TI--GLDVT-KMTVAEFEEAVLKKTLNMSAMVDVMVEASG-SVIISSEEG--ETEANNDKPLEHGLIISHRV---SARDG 644 (726)
Q Consensus 574 tl--~id~~-~~TL~~lid~ilk~~l~m~~~pdV~~~~~G-~ll~ss~e~--e~~~nl~k~L~elv~v~~~~---~~~~~ 644 (726)
|+ +++++ ++||++|+++| ++++||.. +.|+ .| +++|++++. ++++|++++|+|++.-+.+. ++.++
T Consensus 917 t~wd~~~v~~~~Tl~~li~~~-~~~~~~~~-~~i~---~~~~~ly~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~ 991 (1015)
T 3cmm_A 917 KIWDRFDIKGDIKLSDLIEHF-EKDEGLEI-TMLS---YGVSLLYASFFPPKKLKERLNLPITQLVKLVTKKDIPAHVST 991 (1015)
T ss_dssp TTTCEEEEESCCBHHHHHHHH-HHTTCCEE-EEEE---ETTEEEEETTCCHHHHHHHTTSBHHHHHHHHSSSCCCSSCCE
T ss_pred eEEEEEEECCCCcHHHHHHHH-HHHhCCcc-eeec---cCCcEEEecCCCchhhHHhccCCHHHHHHhhccCcCCCCceE
Confidence 33 66666 99999999998 56888755 4444 34 799998874 78899999999999987765 46778
Q ss_pred CeEEEEecC
Q psy9783 645 PEFEILDQK 653 (726)
Q Consensus 645 ~~feV~~~~ 653 (726)
+.|||+|++
T Consensus 992 ~~~~~~~~d 1000 (1015)
T 3cmm_A 992 MILEICADD 1000 (1015)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecC
Confidence 999999984
No 3
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=1.9e-60 Score=526.93 Aligned_cols=356 Identities=32% Similarity=0.554 Sum_probs=277.6
Q ss_pred CHHHHH-HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHHHHhhhcCCC
Q psy9783 10 EKDLED-LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARNSALNFNPD 88 (726)
Q Consensus 10 g~~~q~-kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~~~l~~~np~ 88 (726)
|.+.++ +|++++|+||||||+||+++++|+++|||+|+|+|.|+|+.|||+|||||+.+|||++||++++++++++||+
T Consensus 30 g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~ 109 (434)
T 1tt5_B 30 STESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN 109 (434)
T ss_dssp CSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCC
Confidence 444454 5699999999999999999999999999999999999999999999999999999999999999777766666
Q ss_pred CceeeeeccccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcchhhhHHHHHH
Q psy9783 89 ANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSKAQVARNSAL 168 (726)
Q Consensus 89 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk~~~ak~~~~ 168 (726)
++|
T Consensus 110 v~v----------------------------------------------------------------------------- 112 (434)
T 1tt5_B 110 CNV----------------------------------------------------------------------------- 112 (434)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred CEE-----------------------------------------------------------------------------
Confidence 544
Q ss_pred hhCCCCeEEEEecccccccccccccccccEEEEccCcHHHHHHHHHHhhhc------------CCcEEEEccCCccceEE
Q psy9783 169 NFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALDNRAARNHVNRMCLAS------------EVPLIESGTAGYEGQVE 236 (726)
Q Consensus 169 ~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alDn~~aR~~in~~c~~~------------~iPlI~sg~~G~~G~v~ 236 (726)
+++..++.+. +.++++++|+||+|+||+++|.++|++|+.+ ++|+|++|+.|+.|++.
T Consensus 113 --------~~~~~~i~~~--~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~~~~~g~~G~v~ 182 (434)
T 1tt5_B 113 --------VPHFNKIQDF--NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR 182 (434)
T ss_dssp --------EEEESCGGGB--CHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEEEEEETTEEEEE
T ss_pred --------EEEecccchh--hHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccCCcEEEeccccceeEEE
Confidence 4444444432 3578899999999999999999999999874 99999999999999999
Q ss_pred EEeCCCCcceecCCC--CCCCCCCCccccCCCCCcchhhhhHhHHhHHHHHHHhhhcchhHHHHHHHHhhhhhhhhhccc
Q psy9783 237 LIKKGETKCYECDPK--PAAKTYPGCTIRNTPSEPIHCIVWAKHLFNYLERLMLMKRCPLILKIQKLLERLSAMNVIRSQ 314 (726)
Q Consensus 237 ~i~p~~t~cy~C~~~--~~~~~~p~Cti~~~p~~~~h~i~~a~~lf~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (726)
++.|+.++||+|... |++..+|.||++++|..|.|||+||+.+ +|.
T Consensus 183 v~~p~~t~Cy~C~~~~~p~~~~~p~Ct~~~~p~~~~h~i~~a~~i---~~~----------------------------- 230 (434)
T 1tt5_B 183 VILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRML---QWP----------------------------- 230 (434)
T ss_dssp EECTTTSCCGGGGGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHT---HHH-----------------------------
T ss_pred EECCCCCCCcccccCCCCCcCCCcccccccCCcchhHHHHHHHHH---HHh-----------------------------
Confidence 999999999999854 5678899999999999999999999742 011
Q ss_pred chHHHHHHHhhhccCCccccccccccccchhhhhHhhhhhhhcCCccccccccchhhcccchHHHHHHHhHHHHHHHHcC
Q psy9783 315 LPKLIQAVQLGILRLNPFTVLSGLNICSSDAGAKAAASEATANGDVVRTSTRAWASACGYDPRKLFAKFFDADIRYLISM 394 (726)
Q Consensus 315 ~~~~~~~v~~G~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~w~~~c~~~~~~~f~~~F~~~I~~Ll~~ 394 (726)
.
T Consensus 231 -------------------------------------------------------~------------------------ 231 (434)
T 1tt5_B 231 -------------------------------------------------------K------------------------ 231 (434)
T ss_dssp -------------------------------------------------------H------------------------
T ss_pred -------------------------------------------------------h------------------------
Confidence 0
Q ss_pred CcccCCCCCCCCcccCCCchhhcCCCcccCCCCCCcccccChHHHHHHHHHHHHHHHHHhhhhhccCCCccccCCChhhH
Q psy9783 395 SDLWKTRKAPQPLVWDTLSDAVAGSSKETDGGGLKDQRVWSVAECARVFERSVRELKTKFDAAVEKDEHLVWDKDDKPAM 474 (726)
Q Consensus 395 ~~~w~~~~~P~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~L~~~l~~~~~~~~~l~FDKDDd~hm 474 (726)
. .|. ..++.||+||+.|+
T Consensus 232 ------~-~~~-------------------------------------------------------~~~~~~d~d~~~~~ 249 (434)
T 1tt5_B 232 ------E-QPF-------------------------------------------------------GEGVPLDGDDPEHI 249 (434)
T ss_dssp ------S-CTT-------------------------------------------------------CTTCCCCTTCHHHH
T ss_pred ------h-ccc-------------------------------------------------------ccccccCCCcHHHH
Confidence 0 000 01235999999999
Q ss_pred HHHHHHHHHhHHhcCCCCCCHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhcccchhhhccCCCCCCcccccc
Q psy9783 475 DFVAACANIRAHVFSIPEKSRFDIKSMAGNIIPAIATSNAIVAGLVVLHAIHVLQARFSSCQTVYLRKKPNHRDQMIVPE 554 (726)
Q Consensus 475 DFVtAAANLRA~nY~Ip~~s~~~vK~IAGnIIPAIATTnAIVAGLvvlEl~KlL~~k~e~~rn~flnl~pn~~~~~~vP~ 554 (726)
+||++++|+||..|+|+..+++.+++++|+||||||||||||+|++++|++|+|.|.-+...+ |+-.. ........
T Consensus 250 ~~v~~~a~~~~~~~gi~~~~~~~~~gv~~~iipaia~t~aiig~l~a~EaiK~l~g~~~~l~~-~l~~d--~~~~~~~~- 325 (434)
T 1tt5_B 250 QWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNN-YLVFN--DVDGLYTY- 325 (434)
T ss_dssp HHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTCSCCCCS-EEEEE--CSBSCEEE-
T ss_pred HHHHHHHHHHHHHcCCCccCHHHHHhHhhccCcccccHHHHHHHHHHHHHHHHHhCCCcccCc-eEEEE--cCCCceeE-
Confidence 999999999999999999999999999999999999999999999999999999985433333 32111 10011111
Q ss_pred ccCCCCCCCCCCCCCCCeEEEEEECCCCcHHHHHHHHHhc-ccCCccceeEEEe--cCCeEEEecc----ccccccccCC
Q psy9783 555 KYLTAPNPTCPVCSPKPQRTIGLDVTKMTVAEFEEAVLKK-TLNMSAMVDVMVE--ASGSVIISSE----EGETEANNDK 627 (726)
Q Consensus 555 ~~~~ePnp~C~vC~~~~~~tl~id~~~~TL~~lid~ilk~-~l~m~~~pdV~~~--~~G~ll~ss~----e~e~~~nl~k 627 (726)
....+|+|.|.+|+..+ ..+.++. ++||++|++.+.++ +++|.. |+|+.. +.+.+||.++ +.++++||+|
T Consensus 326 ~~~~~~~~~C~vC~~~~-~~~~~~~-~~tl~~~~~~l~~~~~~~~~~-~~is~~~~~~~~~ly~~~~~~~~~~~~~~l~~ 402 (434)
T 1tt5_B 326 TFEAERKENCPACSQLP-QNIQFSP-SAKLQEVLDYLTNSASLQMKS-PAITATLEGKNRTLYLQSVTSIEERTRPNLSK 402 (434)
T ss_dssp EECCCCCTTCTTTCSSC-BCCCC------CTTHHHHHHHCSSCCCSS-CCCEET----TEECCCCCCTTTTTTSCC-CCC
T ss_pred EEeccCCCCCCccCCCC-ceEEECC-CccHHHHHHHHhccCccceEc-cEEEEEccCCCcEEEecCCcchhhhhHhhhcC
Confidence 12346899999998644 2334443 57999999999776 688888 999873 2336777654 3468899999
Q ss_pred chhhh
Q psy9783 628 PLEHG 632 (726)
Q Consensus 628 ~L~el 632 (726)
+|+||
T Consensus 403 ~l~~l 407 (434)
T 1tt5_B 403 TLKEL 407 (434)
T ss_dssp -----
T ss_pred CHHHc
Confidence 99997
No 4
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=100.00 E-value=2.2e-57 Score=534.95 Aligned_cols=360 Identities=31% Similarity=0.532 Sum_probs=294.9
Q ss_pred ccccCHHHHHHH-hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHHHHhhh
Q psy9783 6 PGVFEKDLEDLI-KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARNSALN 84 (726)
Q Consensus 6 ~~~~g~~~q~kL-~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~~~l~~ 84 (726)
-.++|.+.|+++ ++++|+||||||+||+++++|+++|||+|+|+|.|+|+.|||+|||||+.+|||++|+++++++|++
T Consensus 397 ~~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~ 476 (805)
T 2nvu_B 397 DFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLND 476 (805)
T ss_dssp TCCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHH
Confidence 346799999988 9999999999999999999999999999999999999999999999999999999999999966666
Q ss_pred cCCCCceeeeeccccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcchhhhHH
Q psy9783 85 FNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSKAQVAR 164 (726)
Q Consensus 85 ~np~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk~~~ak 164 (726)
+||++
T Consensus 477 ~np~~--------------------------------------------------------------------------- 481 (805)
T 2nvu_B 477 RVPNC--------------------------------------------------------------------------- 481 (805)
T ss_dssp HSTTC---------------------------------------------------------------------------
T ss_pred HCCCC---------------------------------------------------------------------------
Confidence 65554
Q ss_pred HHHHhhCCCCeEEEEecccccccccccccccccEEEEccCcHHHHHHHHHHhhh------------cCCcEEEEccCCcc
Q psy9783 165 NSALNFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALDNRAARNHVNRMCLA------------SEVPLIESGTAGYE 232 (726)
Q Consensus 165 ~~~~~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alDn~~aR~~in~~c~~------------~~iPlI~sg~~G~~ 232 (726)
+|+++..++.+. +.++++++|+||+|+||+++|.++|++|+. +++|+|++|+.|+.
T Consensus 482 ----------~v~~~~~~~~~~--~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~~~~~g~~ 549 (805)
T 2nvu_B 482 ----------NVVPHFNKIQDF--NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFK 549 (805)
T ss_dssp ----------EEEEEESCGGGS--CHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEEEEETTE
T ss_pred ----------EEEEEecccccc--HHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEEeccccCc
Confidence 555555555442 357889999999999999999999999987 49999999999999
Q ss_pred ceEEEEeCCCCcceecCCC--CCCCCCCCccccCCCCCcchhhhhHhHHhHHHHHHHhhhcchhHHHHHHHHhhhhhhhh
Q psy9783 233 GQVELIKKGETKCYECDPK--PAAKTYPGCTIRNTPSEPIHCIVWAKHLFNYLERLMLMKRCPLILKIQKLLERLSAMNV 310 (726)
Q Consensus 233 G~v~~i~p~~t~cy~C~~~--~~~~~~p~Cti~~~p~~~~h~i~~a~~lf~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (726)
|++.++.|+.++||+|... |++..+|.||++++|+.|.|||.||+.+ +|.
T Consensus 550 G~~~~~~p~~~~c~~c~~~~~p~~~~~~~c~~~~~~~~~~~~i~~a~~~---~~~------------------------- 601 (805)
T 2nvu_B 550 GNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRML---QWP------------------------- 601 (805)
T ss_dssp EEEEEECTTTSCCTTTSGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHT---HHH-------------------------
T ss_pred eeEEEECCCCCCceeccCCCCCCCCCCCccccCCCCCCccHHHHHHHHh---hcc-------------------------
Confidence 9999999999999999854 5677899999999999999999998742 011
Q ss_pred hcccchHHHHHHHhhhccCCccccccccccccchhhhhHhhhhhhhcCCccccccccchhhcccchHHHHHHHhHHHHHH
Q psy9783 311 IRSQLPKLIQAVQLGILRLNPFTVLSGLNICSSDAGAKAAASEATANGDVVRTSTRAWASACGYDPRKLFAKFFDADIRY 390 (726)
Q Consensus 311 ~~~~~~~~~~~v~~G~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~w~~~c~~~~~~~f~~~F~~~I~~ 390 (726)
..
T Consensus 602 -----------------------------------------------------------~~------------------- 603 (805)
T 2nvu_B 602 -----------------------------------------------------------KE------------------- 603 (805)
T ss_dssp -----------------------------------------------------------HH-------------------
T ss_pred -----------------------------------------------------------cc-------------------
Confidence 00
Q ss_pred HHcCCcccCCCCCCCCcccCCCchhhcCCCcccCCCCCCcccccChHHHHHHHHHHHHHHHHHhhhhhccCCCccccCCC
Q psy9783 391 LISMSDLWKTRKAPQPLVWDTLSDAVAGSSKETDGGGLKDQRVWSVAECARVFERSVRELKTKFDAAVEKDEHLVWDKDD 470 (726)
Q Consensus 391 Ll~~~~~w~~~~~P~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~s~~~L~~~l~~~~~~~~~l~FDKDD 470 (726)
.|. ..++.||+||
T Consensus 604 ------------~~~-------------------------------------------------------~~~~~~d~~~ 616 (805)
T 2nvu_B 604 ------------QPF-------------------------------------------------------GEGVPLDGDD 616 (805)
T ss_dssp ------------CTT-------------------------------------------------------STTCCCCTTC
T ss_pred ------------cCC-------------------------------------------------------CCcccCCCCC
Confidence 000 1134599999
Q ss_pred hhhHHHHHHHHHHhHHhcCCCCCCHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhhhcccchhhhccCCCCCCcc
Q psy9783 471 KPAMDFVAACANIRAHVFSIPEKSRFDIKSMAGNIIPAIATSNAIVAGLVVLHAIHVLQARFSSCQTVYLRKKPNHRDQM 550 (726)
Q Consensus 471 d~hmDFVtAAANLRA~nY~Ip~~s~~~vK~IAGnIIPAIATTnAIVAGLvvlEl~KlL~~k~e~~rn~flnl~pn~~~~~ 550 (726)
+.|++||++++|+||..|+|+..+++.+++++|+||||||||||||+|++++|++|+|.|.-+...+ |+-.- .....
T Consensus 617 ~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e~ik~l~~~~~~l~~-~~~~~--~~~~~ 693 (805)
T 2nvu_B 617 PEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNN-YLVFN--DVDGL 693 (805)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHCSSCCCCS-EEEEE--CSBSC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhccccccCc-eEEec--CCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999986443343 32111 11011
Q ss_pred ccccccCCCCCCCCCCCCCCCeEEEEEECCCCcHHHHHHHHHhc-ccCCccceeEEEe-cCC-eEEEeccc----ccccc
Q psy9783 551 IVPEKYLTAPNPTCPVCSPKPQRTIGLDVTKMTVAEFEEAVLKK-TLNMSAMVDVMVE-ASG-SVIISSEE----GETEA 623 (726)
Q Consensus 551 ~vP~~~~~ePnp~C~vC~~~~~~tl~id~~~~TL~~lid~ilk~-~l~m~~~pdV~~~-~~G-~ll~ss~e----~e~~~ 623 (726)
... ....+|+|.|.+|+..+ ..+.++. ++||++|++.+.++ ++++.. |+|+.. ..| ++||.++. .++++
T Consensus 694 ~~~-~~~~~~~~~C~~C~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ly~~~~~~~~~~~~~ 769 (805)
T 2nvu_B 694 YTY-TFEAERKENCPACSQLP-QNIQFSP-SAKLQEVLDYLTNSASLQMKS-PAITATLEGKNRTLYLQSVTSIEERTRP 769 (805)
T ss_dssp EEE-EECCCCCTTCTTTSCCC-EEEEECT-TSBHHHHHHHHHHCTTTCCSS-CEEEEEETTEEEEEECCSSHHHHHHHGG
T ss_pred ccc-cccCCCCCCCCeeCcee-EEEEECC-cChHHHHHHHHHhhhccCccc-ceEEEEccCCCcEEEecCccchhhhhHh
Confidence 111 12346899999998644 3556664 68999999999876 678888 999874 223 77887653 34889
Q ss_pred ccCCchhhh
Q psy9783 624 NNDKPLEHG 632 (726)
Q Consensus 624 nl~k~L~el 632 (726)
||+|+|+||
T Consensus 770 ~l~~~l~~l 778 (805)
T 2nvu_B 770 NLSKTLKEL 778 (805)
T ss_dssp GGGSBTTTT
T ss_pred hhcCCHHHc
Confidence 999999997
No 5
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=100.00 E-value=3.3e-44 Score=375.61 Aligned_cols=216 Identities=24% Similarity=0.390 Sum_probs=138.8
Q ss_pred CCCCCCCccccCCCCCcchhhhhHhHHhHHHHHHHhhhcchhHHHHHHHHhhhhhhhhhcccchHHHHHHHhhhccCCcc
Q psy9783 253 AAKTYPGCTIRNTPSEPIHCIVWAKHLFNYLERLMLMKRCPLILKIQKLLERLSAMNVIRSQLPKLIQAVQLGILRLNPF 332 (726)
Q Consensus 253 ~~~~~p~Cti~~~p~~~~h~i~~a~~lf~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~p~ 332 (726)
-++++|+|||||||+.|+|||+|||++|++||+... +..+.|++. |++++.+.. ....
T Consensus 10 ~~ks~P~CTlrsfP~~i~HcI~WAr~lFe~lF~~~~-------~~~n~~l~d-----------p~~~~~~~~----~~~~ 67 (276)
T 1z7l_A 10 FEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPA-------ENVNQYLTD-----------SKFVERTLR----LAGT 67 (276)
T ss_dssp ----CCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHH-------HHHHHHTTC-----------SHHHHHHHT----SSTT
T ss_pred CCCCCceeccCCCCCChhHHHHHHHHHHHHHHcCCH-------HHHHHhhcC-----------hHHHHHHHh----ccch
Confidence 368899999999999999999999999999999432 222222221 122111110 0000
Q ss_pred ccccccccccchhhhhHhhhhhhhcCCccccccccchhhcccchHHHHHHHhHHHHHHHHcC----------CcccCC-C
Q psy9783 333 TVLSGLNICSSDAGAKAAASEATANGDVVRTSTRAWASACGYDPRKLFAKFFDADIRYLISM----------SDLWKT-R 401 (726)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~w~~~c~~~~~~~f~~~F~~~I~~Ll~~----------~~~w~~-~ 401 (726)
.. ...+..- ...+....++.|. +|+.||+.+|+++|+++|++||+| ++||++ |
T Consensus 68 -----------~~-~~~l~~i---~~~L~~~~p~~~~-~c~~~Ar~~F~k~F~~~I~qLL~~fP~D~~t~~G~~fWsg~K 131 (276)
T 1z7l_A 68 -----------QP-LEVLEAV---QRSLVLQRPQTWG-DCVTWACHHWHTQYCNNIRQLLHNFPPDQLTSSGAPFWSGPK 131 (276)
T ss_dssp -----------HH-HHHHHHH---HHHHTTTCCSSHH-HHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCTTSCBSSCSSC
T ss_pred -----------hh-HHHHHHH---HHHHhhcCCCcHH-HHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCcccCCCC
Confidence 00 0011100 0112223455674 799999999999999999999998 899999 8
Q ss_pred CCCCCcccCCCchhh-----cCCCcccCCCCCCc----ccc-----------cChHH--------------HHHHHHHHH
Q psy9783 402 KAPQPLVWDTLSDAV-----AGSSKETDGGGLKD----QRV-----------WSVAE--------------CARVFERSV 447 (726)
Q Consensus 402 ~~P~pl~~~~~~~~~-----~~~~~~~~~~~~~~----~~~-----------~~~~~--------------~~~~f~~s~ 447 (726)
|+|+||+||..+..+ +.+...+..+|++. +.+ |++.+ ...++.+++
T Consensus 132 r~P~PL~fd~~~~~h~~fI~aaa~L~A~~~gi~~~~d~~~i~~~~~~~~vp~f~p~~~~ki~~~e~~~~~~~~~~~~~~~ 211 (276)
T 1z7l_A 132 RCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLTGSQDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVDDSRL 211 (276)
T ss_dssp CCCCCCCCCTTSHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHHTCCCCCCCCCSSCCCCSSSCCC------CCSHHH
T ss_pred CCCCCcccCCCchHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHhcCCCCCcCCccccccccchhhhchhcccccHHHH
Confidence 999999999864311 11100000111110 001 11111 113355688
Q ss_pred HHHHHHhhhhh----ccCCCccccCCChh--hHHHHHHHHHHhHHhcCCCCCCHHHHHHhhcCCC
Q psy9783 448 RELKTKFDAAV----EKDEHLVWDKDDKP--AMDFVAACANIRAHVFSIPEKSRFDIKSMAGNII 506 (726)
Q Consensus 448 ~~L~~~l~~~~----~~~~~l~FDKDDd~--hmDFVtAAANLRA~nY~Ip~~s~~~vK~IAGnII 506 (726)
++|.+++.+.. ....+++||||||. |||||+|||||||+||+||++|||++|+||||||
T Consensus 212 ~~L~~~l~~~~~~~~~~~~pl~FeKDDd~N~hmdFItAaSNLRA~nY~I~~~dr~~~K~IAG~II 276 (276)
T 1z7l_A 212 EELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPADRHKSKLIAGKII 276 (276)
T ss_dssp HHHHHHSCCGGGSTTCCCCCCCCCSSCTTSSHHHHHHHHHHHHHHHTTCCCCCHHHHHHHTTC--
T ss_pred HHHHHHhhhhhhcccccCCCcceecCCCcccHHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCcC
Confidence 88988886532 14678999999997 9999999999999999999999999999999998
No 6
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=3.7e-37 Score=331.86 Aligned_cols=162 Identities=23% Similarity=0.396 Sum_probs=145.5
Q ss_pred CcccccccCHHHHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHHHH
Q psy9783 2 ATKIPGVFEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARNS 81 (726)
Q Consensus 2 ~~~~~~~~g~~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~~~ 81 (726)
+.||+++||.++|++|++++|+||||||+||++|++|+++|||+|+|+|.|+|+.+||+|||||+.+|||++||++++++
T Consensus 19 Y~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~ 98 (346)
T 1y8q_A 19 YDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLER 98 (346)
T ss_dssp HHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHH
T ss_pred HHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhhcCCCCceeeeeccccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcchhh
Q psy9783 82 ALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSKAQ 161 (726)
Q Consensus 82 l~~~np~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk~~ 161 (726)
|+++||++++..
T Consensus 99 l~~lnp~v~v~~-------------------------------------------------------------------- 110 (346)
T 1y8q_A 99 AQNLNPMVDVKV-------------------------------------------------------------------- 110 (346)
T ss_dssp HHHTCTTSEEEE--------------------------------------------------------------------
T ss_pred HHhHCCCeEEEE--------------------------------------------------------------------
Confidence 777777765554
Q ss_pred hHHHHHHhhCCCCeEEEEecccccccccccccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCccceEEEEeCC
Q psy9783 162 VARNSALNFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGYEGQVELIKKG 241 (726)
Q Consensus 162 ~ak~~~~~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~~G~v~~i~p~ 241 (726)
+...+.+ ...+++++||+||+|+||.++|.++|++|+.+++|+|.+++.|+.|++.+..+
T Consensus 111 -----------------~~~~~~~--~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v~~d~~- 170 (346)
T 1y8q_A 111 -----------------DTEDIEK--KPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTFANLG- 170 (346)
T ss_dssp -----------------ECSCGGG--CCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEEEEECS-
T ss_pred -----------------EecccCc--chHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEEEEecC-
Confidence 3333322 23578899999999999999999999999999999999999999999998886
Q ss_pred CCcceecCCC
Q psy9783 242 ETKCYECDPK 251 (726)
Q Consensus 242 ~t~cy~C~~~ 251 (726)
...|+.|.+.
T Consensus 171 ~~~~~~~~~~ 180 (346)
T 1y8q_A 171 EHEFVEEKTK 180 (346)
T ss_dssp EEEEEEECC-
T ss_pred CCCEEEcCCC
Confidence 5889999765
No 7
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=6.6e-35 Score=330.13 Aligned_cols=187 Identities=21% Similarity=0.319 Sum_probs=165.0
Q ss_pred CcccccccCHHHHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHHHH
Q psy9783 2 ATKIPGVFEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARNS 81 (726)
Q Consensus 2 ~~~~~~~~g~~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~~~ 81 (726)
+.||+++||.++|++|++++|+||||||+||++|++|+++|||+|+|+|.|+|+.|||+|||||+.+|||++||++++++
T Consensus 15 Y~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~ 94 (531)
T 1tt5_A 15 YDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEF 94 (531)
T ss_dssp THHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHH
T ss_pred hhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCceeeeeccccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcchhh
Q psy9783 82 ALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSKAQ 161 (726)
Q Consensus 82 l~~~np~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk~~ 161 (726)
|+++||++++......+
T Consensus 95 l~~lNp~v~v~~~~~~~--------------------------------------------------------------- 111 (531)
T 1tt5_A 95 LQELNSDVSGSFVEESP--------------------------------------------------------------- 111 (531)
T ss_dssp HHTTCTTSBCCEESSCH---------------------------------------------------------------
T ss_pred HHHhCCCCeEEEeCCCc---------------------------------------------------------------
Confidence 99999988776532210
Q ss_pred hHHHHHHhhCCCCeEEEEecccccccccccccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCccceEEEEeCC
Q psy9783 162 VARNSALNFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGYEGQVELIKKG 241 (726)
Q Consensus 162 ~ak~~~~~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~~G~v~~i~p~ 241 (726)
..+. .+..+++++||+||+|+||.++|.++|++|+.+++|+|.+|+.|+.|++.++.|
T Consensus 112 ---~~~~------------------~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~~~p- 169 (531)
T 1tt5_A 112 ---ENLL------------------DNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIK- 169 (531)
T ss_dssp ---HHHH------------------HSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEEEEECS-
T ss_pred ---chhh------------------hhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEEEEEcC-
Confidence 1110 123478899999999999999999999999999999999999999999999999
Q ss_pred CCcceecCCCCCCCCCCCccccCCCCCcchhhhh
Q psy9783 242 ETKCYECDPKPAAKTYPGCTIRNTPSEPIHCIVW 275 (726)
Q Consensus 242 ~t~cy~C~~~~~~~~~p~Cti~~~p~~~~h~i~~ 275 (726)
...|++|.+. +..++.|+++.+|..|.||-.+
T Consensus 170 ~~~~~d~~~~--~~~~~lr~~~p~P~~~~~~~~~ 201 (531)
T 1tt5_A 170 EHPVIESHPD--NALEDLRLDKPFPELREHFQSY 201 (531)
T ss_dssp CEEESCCCCS--SCCCCCCSSSCCHHHHHHHHTC
T ss_pred CceeccCCCC--CCCCcccccCCCCCchhhhhcc
Confidence 4556666543 5678999999999999999654
No 8
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=9.2e-34 Score=299.19 Aligned_cols=160 Identities=29% Similarity=0.497 Sum_probs=120.1
Q ss_pred ccccCH-HHHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHHHHhhh
Q psy9783 6 PGVFEK-DLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARNSALN 84 (726)
Q Consensus 6 ~~~~g~-~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~~~l~~ 84 (726)
++-||. ++|++|++++|+||||||+||+++++|+++|||+|+|+|.|+||.|||+||| |+.+|||++|+++++++|++
T Consensus 22 L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~-~~~~diG~~Ka~aa~~~L~~ 100 (292)
T 3h8v_A 22 LKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQAGLSKVQAAEHTLRN 100 (292)
T ss_dssp ----------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCTTSBHHHHHHHHHHH
T ss_pred ccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhccccc-CChhhcCchHHHHHHHHHHh
Confidence 456998 8999999999999999999999999999999999999999999999999997 68999999999999988777
Q ss_pred cCCCCceeeeeccccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcchhhhHH
Q psy9783 85 FNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSKAQVAR 164 (726)
Q Consensus 85 ~np~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk~~~ak 164 (726)
+||+++|...
T Consensus 101 iNP~v~v~~~---------------------------------------------------------------------- 110 (292)
T 3h8v_A 101 INPDVLFEVH---------------------------------------------------------------------- 110 (292)
T ss_dssp HCTTSEEEEE----------------------------------------------------------------------
T ss_pred hCCCcEEEEe----------------------------------------------------------------------
Confidence 7777666543
Q ss_pred HHHHhhCCCCeEEEEeccccccccccccc-----------ccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCC--c
Q psy9783 165 NSALNFNPDANIVAHHTSIISADFGVNYF-----------KQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAG--Y 231 (726)
Q Consensus 165 ~~~~~~np~~~i~~~~~~i~~~~~~~~~~-----------~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G--~ 231 (726)
..++++...-..|+ +++|+||+|+||+++|.++|++|+.+++|+|++|+.| +
T Consensus 111 ---------------~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pli~~gv~~~~~ 175 (292)
T 3h8v_A 111 ---------------NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAV 175 (292)
T ss_dssp ---------------CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEECTTSS
T ss_pred ---------------cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCEEEeeeeccee
Confidence 22222211011222 6899999999999999999999999999999999875 8
Q ss_pred cceEEEEeCCCCcceecCCC
Q psy9783 232 EGQVELIKKGETKCYECDPK 251 (726)
Q Consensus 232 ~G~v~~i~p~~t~cy~C~~~ 251 (726)
.||+.++.|+.++||+|.+.
T Consensus 176 ~Gqv~~~~pg~t~Cy~Cl~p 195 (292)
T 3h8v_A 176 SGHIQLIIPGESACFACAPP 195 (292)
T ss_dssp EEEEEEECTTTSCCTTSSSC
T ss_pred EEEEEEECCCCCCCHhhcCC
Confidence 99999999999999999854
No 9
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=100.00 E-value=7e-33 Score=285.84 Aligned_cols=164 Identities=26% Similarity=0.443 Sum_probs=146.2
Q ss_pred Ccccccc--cCHHHHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHH
Q psy9783 2 ATKIPGV--FEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVAR 79 (726)
Q Consensus 2 ~~~~~~~--~g~~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~ 79 (726)
+.||+++ ||.++|++|++++|+|||+||+||+++++|+++||++|+|+|.|.|+.|||+||+||+.+|||++|+++++
T Consensus 9 y~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~ 88 (251)
T 1zud_1 9 YSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQ 88 (251)
T ss_dssp THHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHH
T ss_pred hhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHH
Confidence 5789999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCCceeeeeccccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcch
Q psy9783 80 NSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSK 159 (726)
Q Consensus 80 ~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk 159 (726)
++++++||++++..
T Consensus 89 ~~l~~~np~~~v~~------------------------------------------------------------------ 102 (251)
T 1zud_1 89 QRLTQLNPDIQLTA------------------------------------------------------------------ 102 (251)
T ss_dssp HHHHHHCTTSEEEE------------------------------------------------------------------
T ss_pred HHHHHHCCCCEEEE------------------------------------------------------------------
Confidence 87777777766554
Q ss_pred hhhHHHHHHhhCCCCeEEEEecccccccccccccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCccceEEEEe
Q psy9783 160 AQVARNSALNFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGYEGQVELIK 239 (726)
Q Consensus 160 ~~~ak~~~~~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~~G~v~~i~ 239 (726)
+...+... ....+++++|+||+|+||+++|..+|+.|+.+++|+|.+++.|+.|++.++.
T Consensus 103 -------------------~~~~~~~~-~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G~v~~~~ 162 (251)
T 1zud_1 103 -------------------LQQRLTGE-ALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLT 162 (251)
T ss_dssp -------------------ECSCCCHH-HHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEEEEEEEC
T ss_pred -------------------EeccCCHH-HHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccceEEEEEc
Confidence 22222211 1235678899999999999999999999999999999999999999999999
Q ss_pred CCC-CcceecCCC
Q psy9783 240 KGE-TKCYECDPK 251 (726)
Q Consensus 240 p~~-t~cy~C~~~ 251 (726)
|+. ++||.|...
T Consensus 163 p~~~~~c~~cl~~ 175 (251)
T 1zud_1 163 PPWEQGCYRCLWP 175 (251)
T ss_dssp TTCTTCCHHHHCC
T ss_pred cCCCCCcEEEeCC
Confidence 987 799999864
No 10
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.97 E-value=3.1e-32 Score=292.54 Aligned_cols=173 Identities=23% Similarity=0.307 Sum_probs=141.3
Q ss_pred ccccCHHHHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHHHHhhhc
Q psy9783 6 PGVFEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARNSALNF 85 (726)
Q Consensus 6 ~~~~g~~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~~~l~~~ 85 (726)
.|+|+..++++|++++|+||||||+||+++++|+++|||+|+|+|.|+|+.|||+|||||+.+|+|++|+++++++++++
T Consensus 21 wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~i 100 (340)
T 3rui_A 21 WRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI 100 (340)
T ss_dssp HHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHH
T ss_pred HhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHh
Confidence 37788878899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeeec-cccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcchhhhHH
Q psy9783 86 NPDANIYYQVD-FHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSKAQVAR 164 (726)
Q Consensus 86 np~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk~~~ak 164 (726)
||++++..... +.+..+++. . ..+
T Consensus 101 nP~v~v~~~~~~i~~~g~~~~---------------------------------------------------~----~~~ 125 (340)
T 3rui_A 101 FPLMDATGVKLSIPMIGHKLV---------------------------------------------------N----EEA 125 (340)
T ss_dssp CTTCEEEEECCCCCCTTSCCS---------------------------------------------------C----HHH
T ss_pred CCCCEEEEEeccccccCcccc---------------------------------------------------h----hhh
Confidence 99888765321 111111000 0 000
Q ss_pred HHHHhhCCCCeEEEEecccccccccccccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCccceEEEEe-----
Q psy9783 165 NSALNFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGYEGQVELIK----- 239 (726)
Q Consensus 165 ~~~~~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~~G~v~~i~----- 239 (726)
..+ +.+...++++++|+|++|+||+++|.++|++|+.+++|+|+++ .|+.||+.+..
T Consensus 126 ~~~-----------------~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa-~G~~G~l~v~~g~~~~ 187 (340)
T 3rui_A 126 QHK-----------------DFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFDSYLVMRHGNRDE 187 (340)
T ss_dssp HHH-----------------HHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE-ECSSEEEEEECCCCCS
T ss_pred hcC-----------------CHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee-ecceEEEEEeeccccc
Confidence 000 0011246789999999999999999999999999999999986 99999998864
Q ss_pred --CCCCcceecCCC
Q psy9783 240 --KGETKCYECDPK 251 (726)
Q Consensus 240 --p~~t~cy~C~~~ 251 (726)
|+.++||+|.+.
T Consensus 188 ~~~~~~~Cy~C~~~ 201 (340)
T 3rui_A 188 QSSKQLGCYFCHDV 201 (340)
T ss_dssp SCCCCBCCGGGGSS
T ss_pred CCCCCCCeeeeCCC
Confidence 567899999853
No 11
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.97 E-value=1.4e-31 Score=275.55 Aligned_cols=164 Identities=32% Similarity=0.548 Sum_probs=145.3
Q ss_pred Ccccccc--cCHHHHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHH
Q psy9783 2 ATKIPGV--FEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVAR 79 (726)
Q Consensus 2 ~~~~~~~--~g~~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~ 79 (726)
+.||+++ ||.+.|++|++++|+|||+||+|++++++|+++|+++|+|+|.|.|+.|||+||+||+.+|||++|+++++
T Consensus 12 y~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~ 91 (249)
T 1jw9_B 12 YNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESAR 91 (249)
T ss_dssp THHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHH
T ss_pred hhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHH
Confidence 6799999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCCceeeeeccccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcch
Q psy9783 80 NSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSK 159 (726)
Q Consensus 80 ~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk 159 (726)
+++.++||++++..
T Consensus 92 ~~l~~~np~~~v~~------------------------------------------------------------------ 105 (249)
T 1jw9_B 92 DALTRINPHIAITP------------------------------------------------------------------ 105 (249)
T ss_dssp HHHHHHCTTSEEEE------------------------------------------------------------------
T ss_pred HHHHHHCCCcEEEE------------------------------------------------------------------
Confidence 77777777665543
Q ss_pred hhhHHHHHHhhCCCCeEEEEecccccccccccccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCccceEEEEe
Q psy9783 160 AQVARNSALNFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGYEGQVELIK 239 (726)
Q Consensus 160 ~~~ak~~~~~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~~G~v~~i~ 239 (726)
+...+... ...+++.++|+||+|+||.++|..++++|+..++|+|.+++.|+.|++.++.
T Consensus 106 -------------------~~~~~~~~-~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~v~~~~ 165 (249)
T 1jw9_B 106 -------------------VNALLDDA-ELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFT 165 (249)
T ss_dssp -------------------ECSCCCHH-HHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEEEEEEC
T ss_pred -------------------EeccCCHh-HHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEEEEEEe
Confidence 22222211 1134678999999999999999999999999999999999999999999999
Q ss_pred CCC-CcceecCCC
Q psy9783 240 KGE-TKCYECDPK 251 (726)
Q Consensus 240 p~~-t~cy~C~~~ 251 (726)
|+. ++||.|...
T Consensus 166 p~~~~~c~~c~~~ 178 (249)
T 1jw9_B 166 YQDGEPCYRCLSR 178 (249)
T ss_dssp CCTTCCCTHHHHT
T ss_pred CCCCCCceEEECC
Confidence 876 799999853
No 12
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.97 E-value=2.1e-30 Score=279.93 Aligned_cols=163 Identities=28% Similarity=0.414 Sum_probs=139.7
Q ss_pred Cccccc---ccC--HHH-HHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHH
Q psy9783 2 ATKIPG---VFE--KDL-EDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKA 75 (726)
Q Consensus 2 ~~~~~~---~~g--~~~-q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka 75 (726)
+.||+. +|| .+. |++|++++|+|||+||+||+++++|+++|||+|+|+|.|+|+.|||+||+||+.+|||++|+
T Consensus 95 Y~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka 174 (353)
T 3h5n_A 95 YSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKT 174 (353)
T ss_dssp THHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHH
T ss_pred hhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHH
Confidence 456654 455 456 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCceeeeeccccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhcccc
Q psy9783 76 QVARNSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHV 155 (726)
Q Consensus 76 ~va~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hv 155 (726)
+++++++.++||+
T Consensus 175 ~~~~~~l~~~np~------------------------------------------------------------------- 187 (353)
T 3h5n_A 175 EVIKRELLKRNSE------------------------------------------------------------------- 187 (353)
T ss_dssp HHHHHHHHHHCTT-------------------------------------------------------------------
T ss_pred HHHHHHHHHHCCC-------------------------------------------------------------------
Confidence 9999666655555
Q ss_pred CcchhhhHHHHHHhhCCCCeEEEEecccccccccccccccccEEEEccCcHH-HHHHHHHHhhhcCCcEEEEccCCccce
Q psy9783 156 GKSKAQVARNSALNFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALDNRA-ARNHVNRMCLASEVPLIESGTAGYEGQ 234 (726)
Q Consensus 156 g~sk~~~ak~~~~~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alDn~~-aR~~in~~c~~~~iPlI~sg~~G~~G~ 234 (726)
++|+++...+.+...-.. ++++|+||+|+||+. +|.++|++|+.+++|+|.+|+.|..|+
T Consensus 188 ------------------v~v~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~~g~~g~ 248 (353)
T 3h5n_A 188 ------------------ISVSEIALNINDYTDLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAV 248 (353)
T ss_dssp ------------------SEEEEEECCCCSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEEETTEEE
T ss_pred ------------------CeEEEeecccCchhhhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEEeCCEEE
Confidence 455555555544331233 889999999999999 999999999999999999999999999
Q ss_pred EEE-EeCCCCcceecCC
Q psy9783 235 VEL-IKKGETKCYECDP 250 (726)
Q Consensus 235 v~~-i~p~~t~cy~C~~ 250 (726)
+.. +.|+.++||+|..
T Consensus 249 ~g~~~~p~~~~C~~C~~ 265 (353)
T 3h5n_A 249 FGPLYVPGKTGCYECQK 265 (353)
T ss_dssp EEEEECTTTSCCTTTTC
T ss_pred EEEEEcCCCCCChhhcC
Confidence 865 4699999999974
No 13
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.97 E-value=8.9e-31 Score=298.04 Aligned_cols=171 Identities=23% Similarity=0.317 Sum_probs=140.2
Q ss_pred cccCHHHHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHHHHhhhcC
Q psy9783 7 GVFEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARNSALNFN 86 (726)
Q Consensus 7 ~~~g~~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~~~l~~~n 86 (726)
|+|+..++++|++++|+||||||+||++|++|+++|||+|+|+|.|+|+.|||+||+||+.+|||++|+++|+++++++|
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN 393 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF 393 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC
Confidence 67888888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeec-cccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcchhhhHHH
Q psy9783 87 PDANIYYQVD-FHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSKAQVARN 165 (726)
Q Consensus 87 p~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk~~~ak~ 165 (726)
|++++..... +.+..++ ++.. .+.
T Consensus 394 P~V~v~~~~~~Ipm~gh~---------------------------------------------------v~~e----~~~ 418 (615)
T 4gsl_A 394 PLMDATGVKLSIPMIGHK---------------------------------------------------LVNE----EAQ 418 (615)
T ss_dssp TTCEEEEECCCCCCTTCC---------------------------------------------------CSCH----HHH
T ss_pred CCcEEEEeeccccccCcc---------------------------------------------------ccch----hhh
Confidence 9988775321 1111110 0000 000
Q ss_pred HHHhhCCCCeEEEEecccccccccccccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCccceEEEEe------
Q psy9783 166 SALNFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGYEGQVELIK------ 239 (726)
Q Consensus 166 ~~~~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~~G~v~~i~------ 239 (726)
.+ +.+...+++.++|+||+|+||+++|.++|++|+.+++|+|+++ .|+.||+.+..
T Consensus 419 ~l-----------------~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aa-lG~~Gql~v~~g~~~~~ 480 (615)
T 4gsl_A 419 HK-----------------DFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFDSYLVMRHGNRDEQ 480 (615)
T ss_dssp HH-----------------HHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEE-ECSSEEEEEECCC----
T ss_pred cC-----------------CHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEE-ccceeEEEEeecccccC
Confidence 00 0011246788999999999999999999999999999999986 99999998764
Q ss_pred -CCCCcceecCC
Q psy9783 240 -KGETKCYECDP 250 (726)
Q Consensus 240 -p~~t~cy~C~~ 250 (726)
|+.++||.|.+
T Consensus 481 ~~~~~~CY~Cl~ 492 (615)
T 4gsl_A 481 SSKQLGCYFCHD 492 (615)
T ss_dssp --CCCCCTTTSC
T ss_pred CCCCCCceeeCC
Confidence 46789999985
No 14
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.8e-30 Score=311.59 Aligned_cols=182 Identities=20% Similarity=0.320 Sum_probs=158.0
Q ss_pred CcccccccCHHHHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHHHH
Q psy9783 2 ATKIPGVFEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARNS 81 (726)
Q Consensus 2 ~~~~~~~~g~~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~~~ 81 (726)
+.||+++||.++|++|++++|+||||||+||++|++|+++|||+|+|+|.|+|+.+||+|||||+.+|||++||++++++
T Consensus 10 Y~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~a~~~~ 89 (1015)
T 3cmm_A 10 YSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAK 89 (1015)
T ss_dssp HHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHHHHHHH
T ss_pred ccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhcCCCCceeeeeccccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcchhh
Q psy9783 82 ALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSKAQ 161 (726)
Q Consensus 82 l~~~np~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk~~ 161 (726)
|+++||+++|..
T Consensus 90 L~~lNP~v~v~~-------------------------------------------------------------------- 101 (1015)
T 3cmm_A 90 LAELNAYVPVNV-------------------------------------------------------------------- 101 (1015)
T ss_dssp HTTSCTTSCEEE--------------------------------------------------------------------
T ss_pred HHHHCCCCeEEE--------------------------------------------------------------------
Confidence 888877766553
Q ss_pred hHHHHHHhhCCCCeEEEEecccccccccccccccccEEEEccC-cHHHHHHHHHHhhhcCCcEEEEccCCccceEEEEeC
Q psy9783 162 VARNSALNFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALD-NRAARNHVNRMCLASEVPLIESGTAGYEGQVELIKK 240 (726)
Q Consensus 162 ~ak~~~~~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alD-n~~aR~~in~~c~~~~iPlI~sg~~G~~G~v~~i~p 240 (726)
+...++ .+++.+||+||+|+| |.++|..+|++|+.+++|+|.+++.|+.|++.+.
T Consensus 102 -----------------~~~~l~-----~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~d-- 157 (1015)
T 3cmm_A 102 -----------------LDSLDD-----VTQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGNTFVD-- 157 (1015)
T ss_dssp -----------------CCCCCC-----STTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEE--
T ss_pred -----------------ecCCCC-----HHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEEEEEec--
Confidence 222222 257889999999999 9999999999999999999999999999998663
Q ss_pred CCCcceecCCC--CCCCCCCCccccCCCCCcchhhhhHhH
Q psy9783 241 GETKCYECDPK--PAAKTYPGCTIRNTPSEPIHCIVWAKH 278 (726)
Q Consensus 241 ~~t~cy~C~~~--~~~~~~p~Cti~~~p~~~~h~i~~a~~ 278 (726)
.++||.|... ..+.+...|+| +.|. ++||+.+.++
T Consensus 158 -~~~~~~c~~~~~~~p~~~~i~~i-~~p~-~v~~l~~~~h 194 (1015)
T 3cmm_A 158 -LGDEFTVLDPTGEEPRTGMVSDI-EPDG-TVTMLDDNRH 194 (1015)
T ss_dssp -CCSCEEESBSSCCCCCEEEEEEE-CTTC-EEEESTTCCC
T ss_pred -CCCceEEeeCCCCCCccccccCC-CCCc-eeEeeecccc
Confidence 3679999853 23456667888 5564 7999886653
No 15
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.96 E-value=9.7e-30 Score=289.34 Aligned_cols=171 Identities=23% Similarity=0.316 Sum_probs=137.6
Q ss_pred cccCHHHHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCCcCCCCCCCccChhHHHHHHHHhhhcC
Q psy9783 7 GVFEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARNSALNFN 86 (726)
Q Consensus 7 ~~~g~~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLnRQfLf~~~dvGk~Ka~va~~~l~~~n 86 (726)
|++|..+|++|++++|+||||||+||++|++|+++|||+|+|+|.|+|+.|||+||+||+.+|||++||++|+++|+++|
T Consensus 315 rll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iN 394 (598)
T 3vh1_A 315 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF 394 (598)
T ss_dssp HHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHC
T ss_pred hccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHC
Confidence 46777778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeecc-ccchhhhhhccccCchhhhHhhccccCCCCCCeEeeecchhhhhhhhchhhhhhccccCcchhhhHHH
Q psy9783 87 PDANIYYQVDF-HLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIIRFLHLNRQFLFHKQHVGKSKAQVARN 165 (726)
Q Consensus 87 p~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~q~l~~~~hvg~sk~~~ak~ 165 (726)
|++++...... .+++++ ++.+.. .
T Consensus 395 P~v~v~~~~~~I~~pgh~---------------------------------------------------i~~~~~----~ 419 (598)
T 3vh1_A 395 PLMDATGVKLSIPMIGHK---------------------------------------------------LVNEEA----Q 419 (598)
T ss_dssp TTCEEEEECCCCCCSSCC---------------------------------------------------CCSHHH----H
T ss_pred CCcEEEEEeccccccCcc---------------------------------------------------cccccc----c
Confidence 98887753321 011000 000000 0
Q ss_pred HHHhhCCCCeEEEEecccccccccccccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCccceEEEEeC-----
Q psy9783 166 SALNFNPDANIVAHHTSIISADFGVNYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGYEGQVELIKK----- 240 (726)
Q Consensus 166 ~~~~~np~~~i~~~~~~i~~~~~~~~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~~G~v~~i~p----- 240 (726)
.+ +.+...++++++|+||+|+||+++|..+|++|+.+++|+|.+ +.|+.|++.+..+
T Consensus 420 ~l-----------------~~~~l~~li~~~DvVvdatDn~~tR~lin~~c~~~~~plI~a-a~G~~Gqv~v~~g~~p~~ 481 (598)
T 3vh1_A 420 HK-----------------DFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINA-ALGFDSYLVMRHGNRDEQ 481 (598)
T ss_dssp HH-----------------HHHHHHHHHHHCSEEEECCSBGGGTHHHHHHHHHTTCEEEEE-EECSSEEEEEEEC-----
T ss_pred cc-----------------CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHhcCCCEEEE-EECCccEEEEEccCCCcc
Confidence 00 001123678899999999999999999999999999999986 5899999987752
Q ss_pred --CCCcceecCC
Q psy9783 241 --GETKCYECDP 250 (726)
Q Consensus 241 --~~t~cy~C~~ 250 (726)
+.++||+|..
T Consensus 482 ~~~~~~Cy~Cl~ 493 (598)
T 3vh1_A 482 SSKQLGCYFCHD 493 (598)
T ss_dssp ---CBCCTTTSC
T ss_pred CCCCCCceeecC
Confidence 3578999974
No 16
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=98.21 E-value=2.8e-07 Score=96.59 Aligned_cols=66 Identities=20% Similarity=0.371 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHhhhh---------hc----cCCCccccCCChhhHHHHHHHHHHhHHhcCCCC-CCHHHHHHhhcCC
Q psy9783 440 ARVFERSVRELKTKFDAA---------VE----KDEHLVWDKDDKPAMDFVAACANIRAHVFSIPE-KSRFDIKSMAGNI 505 (726)
Q Consensus 440 ~~~f~~s~~~L~~~l~~~---------~~----~~~~l~FDKDDd~hmDFVtAAANLRA~nY~Ip~-~s~~~vK~IAGnI 505 (726)
.++|...+++|...++.- |+ ...||.||..|+.|++||.|||||||.+|||+. .++-.+..++.++
T Consensus 100 ~k~F~~~I~qLL~~fP~D~~t~~G~~fWsg~Kr~P~PL~fd~~~~~h~~fI~aaa~L~A~~~gi~~~~d~~~i~~~~~~~ 179 (276)
T 1z7l_A 100 HTQYCNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLTGSQDRAAVASLLQSV 179 (276)
T ss_dssp HHHHTHHHHHHHHHSCTTCBCTTSCBSSCSSCCCCCCCCCCTTSHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCccccccCCCcccCCCCCCCCCcccCCCchHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHhcC
Confidence 355778888888775531 21 356899999999999999999999999999986 5665555555443
No 17
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.29 E-value=0.00079 Score=58.75 Aligned_cols=34 Identities=32% Similarity=0.400 Sum_probs=30.3
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|+|+|++|..+++.|...|..+++++|.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4689999999999999999999997789998854
No 18
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.79 E-value=0.0075 Score=56.35 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=32.7
Q ss_pred HHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 14 EDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 14 q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
-+++.+.+|+|+|+|.+|..+++.|...|. +++++|.+.
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~ 52 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNE 52 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH
Confidence 356678899999999999999999999996 799998763
No 19
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.79 E-value=0.0019 Score=67.54 Aligned_cols=36 Identities=39% Similarity=0.658 Sum_probs=32.9
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.+++|+|+|+||+|..++..|+..|+++|+|++.+
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 567899999999999999999999999999998654
No 20
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.56 E-value=0.0099 Score=53.40 Aligned_cols=36 Identities=31% Similarity=0.526 Sum_probs=29.9
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
++...+|+|+|+|++|..+++.|...|. +++++|.+
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~ 38 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDIN 38 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESC
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3556789999999999999999999996 58888865
No 21
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.50 E-value=0.0053 Score=62.32 Aligned_cols=36 Identities=33% Similarity=0.468 Sum_probs=32.5
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|||+|.+|...++.|..+|. +++||+.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 3788999999999999999999999996 69999864
No 22
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.50 E-value=0.013 Score=53.41 Aligned_cols=34 Identities=24% Similarity=0.441 Sum_probs=29.8
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
...+|+|+|+|.+|..+++.|...|. +++++|.|
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 45689999999999999999999996 68899964
No 23
>1y8x_B Ubiquitin-activating enzyme E1C; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: c.111.1.2 PDB: 3fn1_A
Probab=96.42 E-value=0.001 Score=59.62 Aligned_cols=64 Identities=19% Similarity=0.231 Sum_probs=45.5
Q ss_pred CCCCCCeEEEEEECCCCcHHHHHHHHHhc-ccCCccceeEEEe--cCC-eEEEec---cccccccccCCchhhh
Q psy9783 566 VCSPKPQRTIGLDVTKMTVAEFEEAVLKK-TLNMSAMVDVMVE--ASG-SVIISS---EEGETEANNDKPLEHG 632 (726)
Q Consensus 566 vC~~~~~~tl~id~~~~TL~~lid~ilk~-~l~m~~~pdV~~~--~~G-~ll~ss---~e~e~~~nl~k~L~el 632 (726)
+|++.+ ..+.++. ++||++|||.+.+. .|.|.. |+|+.. +.| +||+.+ .|..|+.||+|+|.||
T Consensus 1 ~Cg~~~-~~l~v~~-~~TL~~lid~L~~~p~~qlk~-PSltt~~~~~~k~LYmq~pp~Lee~Tr~NL~k~l~eL 71 (98)
T 1y8x_B 1 GSSQLP-QNIQFSP-SAKLQEVLDYLTNSASLQMKS-PAITATLEGKNRTLYMQSVTSIEERTRPNLSKTLKEL 71 (98)
T ss_dssp ----CC-CCEECCT-TCBHHHHHHHHHHCTTCCCSS-CEEEEEETTEEEEEECSSCHHHHHHHHHHHHSBSGGG
T ss_pred CCCCCc-EEEEECC-chhHHHHHHHHHhChHhhccC-CeeeeecCCCCCeEEEeCcHHHHHHhHhhhhCCHHHh
Confidence 476533 3445553 78999999999765 789998 999875 223 677664 4677999999999998
No 24
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.34 E-value=0.012 Score=64.33 Aligned_cols=33 Identities=30% Similarity=0.581 Sum_probs=28.8
Q ss_pred CcEEEEcCchHHHHHHHHHHHhC-C-CeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSG-F-SNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~G-v-~~i~iiD~D 52 (726)
++|+|+|+|++|..+++.|+..| + ..+.+.|.+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~ 36 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT 36 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC
Confidence 48999999999999999999988 3 689888753
No 25
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.16 E-value=0.0088 Score=64.01 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=29.6
Q ss_pred cccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEc
Q psy9783 191 NYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESG 227 (726)
Q Consensus 191 ~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg 227 (726)
.+++++|+||+|+..+- -..+.+.|.++++.+++..
T Consensus 73 ~~~~~~DvVi~~~p~~~-~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 73 EVMKEFELVIGALPGFL-GFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp HHHTTCSEEEECCCGGG-HHHHHHHHHHHTCEEEECC
T ss_pred HHHhCCCEEEEecCCcc-cchHHHHHHhcCcceEeee
Confidence 45788999999998763 4567889999999999854
No 26
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.79 E-value=0.069 Score=52.45 Aligned_cols=40 Identities=28% Similarity=0.250 Sum_probs=28.9
Q ss_pred HHHHHHHhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 11 KDLEDLIKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 11 ~~~q~kL~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~ 51 (726)
......|.+++|+|.|+ |+||.++++.|+..|. ++++++.
T Consensus 13 ~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R 53 (236)
T 3e8x_A 13 GRENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVR 53 (236)
T ss_dssp --------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEEC
Confidence 34456789999999997 9999999999999995 6888774
No 27
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.71 E-value=0.02 Score=51.29 Aligned_cols=32 Identities=31% Similarity=0.648 Sum_probs=28.5
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|+|+|+|.+|..+++.|...|. +++++|.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 589999999999999999999994 68888853
No 28
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.48 E-value=0.08 Score=50.09 Aligned_cols=34 Identities=26% Similarity=0.442 Sum_probs=29.2
Q ss_pred cCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
.++|+|.|+ |+||.++++.|+..| .++++++.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~ 37 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDS 37 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCh
Confidence 368999997 999999999999999 5788887653
No 29
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.27 E-value=0.087 Score=50.12 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=30.5
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHh-CCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLS-GFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~-Gv~~i~iiD~D 52 (726)
+.+.+|+|+|+|.+|..+++.|... |. .++++|.|
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~ 72 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIR 72 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECC
Confidence 4467999999999999999999999 96 58888864
No 30
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.26 E-value=0.05 Score=56.52 Aligned_cols=34 Identities=29% Similarity=0.608 Sum_probs=31.4
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEe
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD 50 (726)
+..++++|+|+||.+..++-.|+..|+.+|+|++
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~n 156 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCD 156 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeC
Confidence 3568999999999999999999999999999975
No 31
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.25 E-value=0.092 Score=50.93 Aligned_cols=33 Identities=24% Similarity=0.453 Sum_probs=28.6
Q ss_pred CcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 20 SKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 20 ~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
++|+|.| .|+||.++++.|+..| .++++++.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCc
Confidence 5899999 5999999999999999 5788887653
No 32
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.12 E-value=0.043 Score=57.30 Aligned_cols=36 Identities=28% Similarity=0.600 Sum_probs=32.5
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
|++++|+|||+|.+|...++.|...|. +++|||.+.
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCC
Confidence 578999999999999999999999994 699999754
No 33
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=95.07 E-value=0.07 Score=59.88 Aligned_cols=35 Identities=20% Similarity=0.402 Sum_probs=30.0
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhC-C--CeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSG-F--SNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~G-v--~~i~iiD~D~ 53 (726)
..||+|||+||||..++..|++.+ + ..|+++|.+.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~ 50 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEG 50 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccch
Confidence 468999999999999999999864 5 5899998654
No 34
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.00 E-value=0.082 Score=58.65 Aligned_cols=35 Identities=20% Similarity=0.420 Sum_probs=31.8
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|++++|+|||.|.+|...++.|...|. +++++|.+
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~ 44 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALT 44 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCC
Confidence 568899999999999999999999994 79999964
No 35
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.95 E-value=0.1 Score=52.68 Aligned_cols=34 Identities=29% Similarity=0.525 Sum_probs=29.0
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.++|||.|+|.||.++++.|+..|. ++++++.+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRRS 35 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 35789999999999999999999996 57777643
No 36
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=94.67 E-value=0.034 Score=59.96 Aligned_cols=32 Identities=34% Similarity=0.497 Sum_probs=27.8
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
++++|+|+|+|++|..+++.|+.. ..+++.|.
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R 46 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDV 46 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEES
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEEC
Confidence 578999999999999999999987 67888774
No 37
>3onh_A Ubiquitin-activating enzyme E1-like; ligase, SUMO conjugation, UBC9; 1.60A {Saccharomyces cerevisiae} PDB: 3ong_A
Probab=94.44 E-value=0.055 Score=50.42 Aligned_cols=61 Identities=18% Similarity=0.327 Sum_probs=44.3
Q ss_pred EEEEEC---CCCcHHHHHHHHHhcccCCccceeEEEec--CCeEEEeccccccccccCCchhh-------hhhhcccCC
Q psy9783 574 TIGLDV---TKMTVAEFEEAVLKKTLNMSAMVDVMVEA--SGSVIISSEEGETEANNDKPLEH-------GLIISHRVS 640 (726)
Q Consensus 574 tl~id~---~~~TL~~lid~ilk~~l~m~~~pdV~~~~--~G~ll~ss~e~e~~~nl~k~L~e-------lv~v~~~~~ 640 (726)
.+.++. .++||++|++.+ +.+||+.. ++++.. ...++| ..++++|++|+|++ +++|++.++
T Consensus 9 vl~v~~~dl~~~TL~dLV~~l-~~~~gy~~--eiSV~~~~~~rLLy---D~DfDDnl~k~L~dLgv~~gsfLtv~DEdd 81 (127)
T 3onh_A 9 VIKLSSDCLNKMKLSDFVVLI-REKYSYPQ--DISLLDASNQRLLF---DYDFEDLNDRTLSEINLGNGSIILFSDEEG 81 (127)
T ss_dssp EEEECHHHHHHCBHHHHHHHH-HHHHTCCS--SEEEEETTTTEEEE---ETTBCTTTTSBTTTTTCCTTCEEEEEESCC
T ss_pred EEEeCcccccccCHHHHHHHH-HHhcCCCC--cEEEEecCCCCeEe---CCCccccccCcHHHcCcCCCcEEEEEcccc
Confidence 445554 579999999995 77788754 777762 336765 35689999999999 566666553
No 38
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=94.22 E-value=0.57 Score=45.69 Aligned_cols=36 Identities=22% Similarity=0.537 Sum_probs=31.0
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCC-eEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFS-NIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~-~i~iiD~D 52 (726)
+..++|+|.| .|+||.++++.|+..|.. ++.++|.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 6678999999 699999999999999963 78888754
No 39
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.19 E-value=0.2 Score=48.47 Aligned_cols=31 Identities=32% Similarity=0.475 Sum_probs=27.2
Q ss_pred cEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 21 KVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 21 kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+|+|.| .|+||.++++.|+..| .++.+++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARK 33 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEESS
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 799999 7999999999999999 568888754
No 40
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.14 E-value=0.079 Score=52.03 Aligned_cols=32 Identities=19% Similarity=0.442 Sum_probs=28.5
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|+|+|+|.+|..+++.|...|. .++++|.|
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKY-GVVIINKD 32 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTC-CEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 379999999999999999999996 68899854
No 41
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.11 E-value=0.23 Score=51.44 Aligned_cols=36 Identities=28% Similarity=0.329 Sum_probs=30.0
Q ss_pred HHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 15 DLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 15 ~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
..+..++|||.| .|.||.++++.|...| .+++++|.
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 57 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDN 57 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 356788999999 5999999999999999 46777764
No 42
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.05 E-value=0.14 Score=52.88 Aligned_cols=37 Identities=22% Similarity=0.425 Sum_probs=31.3
Q ss_pred HHHhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 15 DLIKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 15 ~kL~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.+.+++|||.|+ |+||.++++.|+..| .++.++|.+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r~ 53 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQG-HEILVIDNF 53 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEECC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 3567789999996 999999999999999 468888754
No 43
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.03 E-value=0.24 Score=51.25 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=27.2
Q ss_pred HHHHHHHhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 11 KDLEDLIKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 11 ~~~q~kL~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
...+..+..++|||.|+ |.||.++++.|+..|. ++.++|..
T Consensus 11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 52 (347)
T 4id9_A 11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLR 52 (347)
T ss_dssp ----------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCcccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 34566788899999996 9999999999999995 57777754
No 44
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=93.95 E-value=0.23 Score=51.31 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=27.0
Q ss_pred HhcCcEEEEcC-chHHHHHHHHHHHhCCC-eEEEEeC
Q psy9783 17 IKKSKVLVVGA-GGIGCELLKNLVLSGFS-NIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGa-GgiGceiaknLal~Gv~-~i~iiD~ 51 (726)
+..++|||.|+ |.||.++++.|+..|.. ++..+|.
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 45678999997 99999999999999953 4555553
No 45
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.94 E-value=0.27 Score=51.15 Aligned_cols=35 Identities=26% Similarity=0.223 Sum_probs=27.8
Q ss_pred HhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+..++|+|.|+ |.||.++++.|+..| .++.+++.+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~ 43 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARP 43 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECC
Confidence 44679999997 999999999999999 567777644
No 46
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=93.93 E-value=0.26 Score=50.70 Aligned_cols=41 Identities=17% Similarity=0.301 Sum_probs=34.2
Q ss_pred HHHHHHHhcCcEEEEc-CchHHHHHHHHHHHhCCC--eEEEEeC
Q psy9783 11 KDLEDLIKKSKVLVVG-AGGIGCELLKNLVLSGFS--NIEIVDL 51 (726)
Q Consensus 11 ~~~q~kL~~~kVlvVG-aGgiGceiaknLal~Gv~--~i~iiD~ 51 (726)
......|.+++++|.| .||||.++++.|+..|.+ ++.++|.
T Consensus 25 ~~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r 68 (287)
T 3rku_A 25 RKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAAR 68 (287)
T ss_dssp HHHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEES
T ss_pred ccchhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEEC
Confidence 3445678899999998 689999999999999985 7777764
No 47
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.90 E-value=0.61 Score=47.64 Aligned_cols=34 Identities=26% Similarity=0.395 Sum_probs=28.4
Q ss_pred HhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++|||.|+ |+||.++++.|+..|. +++++|.
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r 43 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTAR 43 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeC
Confidence 45678999996 9999999999999995 6776653
No 48
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=93.90 E-value=0.38 Score=50.51 Aligned_cols=36 Identities=17% Similarity=0.411 Sum_probs=31.6
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHh-CCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLS-GFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~-Gv~~i~iiD~D 52 (726)
+.+++|||.| .|+||.++++.|+.. |..++.+++.+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~ 56 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRD 56 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 5678999999 599999999999999 98889888754
No 49
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.88 E-value=0.3 Score=47.04 Aligned_cols=31 Identities=26% Similarity=0.368 Sum_probs=26.4
Q ss_pred CcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.||+|.|+ |+||.++++.|+..|. ++.+++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~-~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH-EVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEe
Confidence 36999997 9999999999999995 6777763
No 50
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.72 E-value=0.093 Score=58.56 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=28.6
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.+..++|+|+|+|++|..+++.|+..|-.+|+++|.
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R 55 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACR 55 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEES
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEEC
Confidence 456779999999999999999999984347888874
No 51
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=93.48 E-value=0.33 Score=50.40 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=29.3
Q ss_pred HhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+..++|||.|+ |+||..+++.|+..|. ++.++|.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 59 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN 59 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56789999996 9999999999999994 6777774
No 52
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.43 E-value=0.07 Score=49.89 Aligned_cols=33 Identities=18% Similarity=0.403 Sum_probs=29.3
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+..|+|||+|..|+.+|..|++.|+ +++|+|..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 3569999999999999999999998 49999853
No 53
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=93.36 E-value=0.37 Score=46.69 Aligned_cols=32 Identities=22% Similarity=0.416 Sum_probs=26.8
Q ss_pred CcEEEEc-CchHHHHHHHHHH-HhCCCeEEEEeCC
Q psy9783 20 SKVLVVG-AGGIGCELLKNLV-LSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVG-aGgiGceiaknLa-l~Gv~~i~iiD~D 52 (726)
++|+|.| .|+||.++++.|+ ..|. ++++++.+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~ 39 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQ 39 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESS
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecC
Confidence 3599999 5999999999999 8887 67877654
No 54
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=93.36 E-value=0.71 Score=49.70 Aligned_cols=37 Identities=30% Similarity=0.590 Sum_probs=32.3
Q ss_pred HHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 15 DLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 15 ~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
..+.+++|||.| .|+||+++++.|+..|..++.++|.
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r 68 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDI 68 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECS
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEEC
Confidence 457789999999 6899999999999999888888864
No 55
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.34 E-value=0.074 Score=49.27 Aligned_cols=34 Identities=18% Similarity=0.283 Sum_probs=30.1
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+.+|+|+|+|.+|..+++.|...|. .++++|.|
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 45789999999999999999999995 68999865
No 56
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.20 E-value=0.094 Score=48.09 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=30.3
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
+.+|+|+|+|.+|..+++.|...|. .++++|.|.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCH
Confidence 4589999999999999999999996 699999763
No 57
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.20 E-value=0.2 Score=52.40 Aligned_cols=39 Identities=28% Similarity=0.364 Sum_probs=29.4
Q ss_pred HHHHHhcCcEEEEc-CchHHHHHHHHHHHh-CCCeEEEEeCC
Q psy9783 13 LEDLIKKSKVLVVG-AGGIGCELLKNLVLS-GFSNIEIVDLD 52 (726)
Q Consensus 13 ~q~kL~~~kVlvVG-aGgiGceiaknLal~-Gv~~i~iiD~D 52 (726)
+...+..++|||.| .|.||.++++.|+.. | .+++++|..
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~ 58 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTD-WEVFGMDMQ 58 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHHSS-CEEEEEESC
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHHhCCC-CEEEEEeCC
Confidence 34567788999999 699999999999998 6 468888754
No 58
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=92.94 E-value=0.52 Score=48.01 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=28.5
Q ss_pred cCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.++|||.| .|.||..+++.|+..|. ++++++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRS 35 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 46899999 69999999999999995 68887765
No 59
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=92.93 E-value=0.52 Score=49.01 Aligned_cols=37 Identities=32% Similarity=0.448 Sum_probs=28.4
Q ss_pred HHhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+.+++|||.|+ |+||..+++.|+..|..+++++|..
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 356689999996 9999999999999996678888754
No 60
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.92 E-value=0.22 Score=52.08 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=30.7
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|.|||+|.+|..++++|+..|...++++|.+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999998789999865
No 61
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.86 E-value=0.086 Score=56.00 Aligned_cols=36 Identities=28% Similarity=0.452 Sum_probs=32.6
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.+++++|+|+||+|..++..|+..|+.+|+|++.+
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 467899999999999999999999999999998643
No 62
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.81 E-value=0.045 Score=50.33 Aligned_cols=39 Identities=15% Similarity=0.324 Sum_probs=33.0
Q ss_pred HHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 13 LEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 13 ~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
........+|+|+|+|++|..+++.|...|+. ++++|.+
T Consensus 15 ~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~ 53 (144)
T 3oj0_A 15 IVRKNGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRN 53 (144)
T ss_dssp HHHHHCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESC
T ss_pred HHHhccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCC
Confidence 33445588999999999999999999999987 9998843
No 63
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.64 E-value=0.079 Score=55.45 Aligned_cols=36 Identities=22% Similarity=0.440 Sum_probs=32.5
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+..++|+|+|+||+|..++..|+..|+.+|+|+|.+
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 457899999999999999999999999999998744
No 64
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=92.50 E-value=0.24 Score=54.80 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=29.3
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..++|+|+|+|++|..+++.|+..|. +++++|.+
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~ 35 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRT 35 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECC
Confidence 35789999999999999999999995 58888754
No 65
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=92.47 E-value=0.91 Score=46.88 Aligned_cols=39 Identities=23% Similarity=0.474 Sum_probs=28.1
Q ss_pred HHHHHHhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 12 DLEDLIKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 12 ~~q~kL~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.....+..++|||.|+ |.||.++++.|+..|. ++.++|.
T Consensus 20 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 59 (343)
T 2b69_A 20 QGHMEKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN 59 (343)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred ccccccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3445677889999996 9999999999999994 6777764
No 66
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=92.44 E-value=0.11 Score=55.18 Aligned_cols=35 Identities=17% Similarity=0.477 Sum_probs=32.1
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++++|+|+||+|..++..|+..|+++|+|++.
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nR 180 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNR 180 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEEC
Confidence 46789999999999999999999999999999863
No 67
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=92.41 E-value=0.51 Score=49.27 Aligned_cols=35 Identities=20% Similarity=0.352 Sum_probs=28.7
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHH--hCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVL--SGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal--~Gv~~i~iiD~D 52 (726)
+..++|||.| .|+||.++++.|+. .|. ++.++|..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKF 45 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECC
Confidence 4568999997 69999999999999 674 57777753
No 68
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=92.39 E-value=0.6 Score=47.87 Aligned_cols=32 Identities=19% Similarity=0.383 Sum_probs=27.6
Q ss_pred CcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|||.| .|.||.++++.|+..| .+++++|.+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecC
Confidence 4799999 5999999999999999 478888754
No 69
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.38 E-value=0.11 Score=54.06 Aligned_cols=35 Identities=29% Similarity=0.467 Sum_probs=31.8
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++++|+|+||+|..++..|+..|+.+|+|++.
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R 152 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANR 152 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeC
Confidence 45789999999999999999999999999999753
No 70
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.31 E-value=0.12 Score=56.52 Aligned_cols=37 Identities=35% Similarity=0.486 Sum_probs=35.0
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+|...||+|+|+|..|..+++.|+.+|+++|+++|..
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5788999999999999999999999999999999976
No 71
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.26 E-value=0.093 Score=54.71 Aligned_cols=37 Identities=19% Similarity=0.334 Sum_probs=33.7
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
+.+++|+|+|+||+|..++..|+..|+++|+|++.+.
T Consensus 115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 5788999999999999999999999999999987553
No 72
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=92.24 E-value=0.92 Score=45.92 Aligned_cols=31 Identities=35% Similarity=0.654 Sum_probs=26.6
Q ss_pred CcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~ 51 (726)
++|||.|+ |+||.++++.|+..|. +++++|.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeC
Confidence 47999997 9999999999999995 6777764
No 73
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.23 E-value=0.13 Score=53.02 Aligned_cols=35 Identities=29% Similarity=0.494 Sum_probs=31.5
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+..++|+|||+|++|..+++.|...|+ +++++|.+
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r~ 161 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNRT 161 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEECC
Confidence 567899999999999999999999998 89988743
No 74
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=92.21 E-value=0.5 Score=48.84 Aligned_cols=36 Identities=25% Similarity=0.336 Sum_probs=28.9
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+..++|||.| .|+||.++++.|+..| .+++++|.+
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 54 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNF 54 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECC
Confidence 45678999998 6999999999999999 578888754
No 75
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.01 E-value=0.11 Score=54.10 Aligned_cols=35 Identities=29% Similarity=0.489 Sum_probs=32.0
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++|+|+|+||+|..++..|+..|+.+|+|++.
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R 158 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNR 158 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEES
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEEC
Confidence 46789999999999999999999999999999864
No 76
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.91 E-value=0.14 Score=56.08 Aligned_cols=38 Identities=21% Similarity=0.440 Sum_probs=35.8
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
+|...||+|+|+|..|+.+++.|+.+|+++|+++|..-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 57889999999999999999999999999999999875
No 77
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.89 E-value=0.12 Score=54.07 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=32.1
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++++|+|+||.|..++..|+..|+++|+|++.
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC
Confidence 45789999999999999999999999999999863
No 78
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=91.69 E-value=0.76 Score=47.08 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=28.4
Q ss_pred hcCcEEEEc-CchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 18 KKSKVLVVG-AGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVG-aGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
.+++|||.| .|+||.++++.|+..|- .++.++|..
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 356899999 59999999999999984 368887753
No 79
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=91.62 E-value=0.38 Score=48.16 Aligned_cols=34 Identities=21% Similarity=0.500 Sum_probs=28.9
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r 39 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIAR 39 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 5667888888 68999999999999997 6888774
No 80
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=91.55 E-value=0.15 Score=52.31 Aligned_cols=35 Identities=34% Similarity=0.561 Sum_probs=31.7
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.+ +|+|+|+||.|..++..|+..|+++|+|++.+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 356 99999999999999999999999999998754
No 81
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.55 E-value=0.64 Score=46.93 Aligned_cols=36 Identities=28% Similarity=0.455 Sum_probs=29.8
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~ 65 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCART 65 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECC
Confidence 46778899997 78999999999999996 57777643
No 82
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=91.45 E-value=0.14 Score=56.94 Aligned_cols=35 Identities=29% Similarity=0.509 Sum_probs=32.7
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCC--CeEEEEe
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGF--SNIEIVD 50 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv--~~i~iiD 50 (726)
.|.+.+|+|+|+||.|..+++.|+.+|+ ++|+|+|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 3567899999999999999999999999 8999998
No 83
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.42 E-value=0.15 Score=52.24 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=30.3
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+..++|+|+|+||+|..++..|+..| .+++++|.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R 150 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNR 150 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEEC
Confidence 45789999999999999999999999 78988763
No 84
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=91.33 E-value=0.17 Score=52.90 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=29.9
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.||+|||+|..|+.+|-.|++.|+ +++|+|.+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~-~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI-KVTIYERN 33 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEecC
Confidence 4689999999999999999999998 58999865
No 85
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=91.31 E-value=0.46 Score=47.94 Aligned_cols=34 Identities=35% Similarity=0.509 Sum_probs=28.1
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r 42 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGR 42 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4567788888 68999999999999996 5777764
No 86
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=91.22 E-value=0.2 Score=46.93 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=29.1
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
+|+|||+|.+|+++|..|++.|. +++|+|...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~-~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGL-KVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 69999999999999999999997 699999754
No 87
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=91.19 E-value=0.76 Score=48.41 Aligned_cols=37 Identities=32% Similarity=0.557 Sum_probs=30.5
Q ss_pred HHhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+..++|||.|+ |.||.++++.|+..|..+++++|..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECC
Confidence 356678999995 9999999999999995578877643
No 88
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.10 E-value=0.21 Score=50.20 Aligned_cols=39 Identities=23% Similarity=0.312 Sum_probs=30.1
Q ss_pred HHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 13 LEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 13 ~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
....+...+|.|||+|.+|..++++|+..|. ++++.|.+
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~ 51 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRD 51 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3457889999999999999999999999996 68888754
No 89
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.07 E-value=0.55 Score=47.28 Aligned_cols=35 Identities=23% Similarity=0.436 Sum_probs=29.1
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.++.++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~ 41 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARD 41 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5677888887 68999999999999997 47787743
No 90
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=91.02 E-value=0.8 Score=44.99 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=28.9
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.-++|+|.| .|+||.++++.|+..|-.++.+++.+
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcC
Confidence 3456899999 69999999999999994477777754
No 91
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=90.97 E-value=0.17 Score=55.00 Aligned_cols=35 Identities=34% Similarity=0.543 Sum_probs=32.3
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++|+|+|+|++|..+++.|...|+++++++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 57889999999999999999999999999999874
No 92
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.84 E-value=0.21 Score=51.77 Aligned_cols=35 Identities=31% Similarity=0.525 Sum_probs=29.9
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
...||+|||+|++|+.++..|+..|. ++++++|.+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999995 478998854
No 93
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=90.69 E-value=0.38 Score=48.96 Aligned_cols=29 Identities=34% Similarity=0.571 Sum_probs=23.5
Q ss_pred CcEEEEcC-chHHHHHHHHHHHhCCCeEEEEe
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD 50 (726)
++|||.|+ |+||.++++.|+..| ++.+++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 37999995 999999999999999 455544
No 94
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=90.62 E-value=1.1 Score=46.52 Aligned_cols=37 Identities=24% Similarity=0.214 Sum_probs=31.4
Q ss_pred HHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 15 DLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 15 ~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+.+++|||.| .|+||.++++.|+..|. +++++|.+
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 457788999999 69999999999999995 68887754
No 95
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.43 E-value=0.23 Score=51.42 Aligned_cols=36 Identities=19% Similarity=0.407 Sum_probs=32.1
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|..++|+|||+|++|..+++.|...|. ++.++|..
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~ 187 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARE 187 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 3678899999999999999999999998 88888854
No 96
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=90.40 E-value=0.22 Score=51.63 Aligned_cols=33 Identities=33% Similarity=0.613 Sum_probs=30.5
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEe
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD 50 (726)
..++|+|+|+||.|..++..|...|+.+|+|++
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~n 150 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYA 150 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 357899999999999999999999999999975
No 97
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.31 E-value=0.25 Score=51.81 Aligned_cols=34 Identities=21% Similarity=0.467 Sum_probs=30.6
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..||.|||+|.+|+.++..|+..|+.+++++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 3689999999999999999999998679999865
No 98
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=90.28 E-value=1 Score=46.08 Aligned_cols=31 Identities=26% Similarity=0.489 Sum_probs=26.5
Q ss_pred CcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 20 SKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 20 ~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
++|||.| .|+||.++++.|+..|. +++++|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeC
Confidence 4799999 69999999999999994 6777764
No 99
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.28 E-value=0.18 Score=51.89 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=31.1
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+..++|+|+|+||+|..++..|+..| .+++|++.+
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~ 151 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRT 151 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECC
Confidence 35689999999999999999999999 899998743
No 100
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=90.20 E-value=1.1 Score=46.07 Aligned_cols=33 Identities=36% Similarity=0.481 Sum_probs=27.6
Q ss_pred cCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.++|+|.| .|+||.++++.|+..|. ++.++|..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 35 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNF 35 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence 46899998 59999999999999994 57777753
No 101
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=90.19 E-value=1.6 Score=44.79 Aligned_cols=32 Identities=28% Similarity=0.533 Sum_probs=26.3
Q ss_pred cEEEEc-CchHHHHHHHHHHHh---CC--CeEEEEeCC
Q psy9783 21 KVLVVG-AGGIGCELLKNLVLS---GF--SNIEIVDLD 52 (726)
Q Consensus 21 kVlvVG-aGgiGceiaknLal~---Gv--~~i~iiD~D 52 (726)
+|||.| .|+||.++++.|+.. |+ .+++++|..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~ 39 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSL 39 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECC
Confidence 699998 699999999999996 53 478887743
No 102
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.17 E-value=0.21 Score=50.65 Aligned_cols=33 Identities=30% Similarity=0.461 Sum_probs=29.7
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.. +|+|||+|++|..+++.|...|+ +++++|.
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r 147 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNR 147 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 456 99999999999999999999998 8988874
No 103
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.16 E-value=0.25 Score=51.63 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=28.6
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.||+|||+|++|+.++..|+..|. +++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 689999999999999999999994 78888754
No 104
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=90.14 E-value=1.7 Score=43.50 Aligned_cols=33 Identities=15% Similarity=0.362 Sum_probs=26.1
Q ss_pred CcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|+|.|+ |+||..+++.|...+-.++.+++.+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~ 34 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRN 34 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESS
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECC
Confidence 37999994 9999999999998833567776654
No 105
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.13 E-value=0.28 Score=48.30 Aligned_cols=36 Identities=14% Similarity=0.372 Sum_probs=29.0
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+...+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 5778899999999999999999999995 68888754
No 106
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.09 E-value=0.23 Score=52.21 Aligned_cols=32 Identities=31% Similarity=0.518 Sum_probs=28.0
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
..||+|||+|++|+.++..|+..|. .++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE-AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4689999999999999999999996 6777763
No 107
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.07 E-value=0.27 Score=51.16 Aligned_cols=32 Identities=25% Similarity=0.425 Sum_probs=29.8
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.++|+|+|+||.|..++..|+..| .+|+|++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nR 149 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNR 149 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 789999999999999999999999 99999753
No 108
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.06 E-value=0.8 Score=46.25 Aligned_cols=36 Identities=31% Similarity=0.467 Sum_probs=27.9
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+++++|+|.| .||||.++++.|+..|. ++.+++.+
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~ 45 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRD 45 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 45677888888 58999999999999996 68887654
No 109
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.97 E-value=0.27 Score=52.35 Aligned_cols=37 Identities=22% Similarity=0.434 Sum_probs=31.9
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
++...||.|||+|.+|..++..|+..|.++++++|-+
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~ 40 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIA 40 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 3567899999999999999999999998889998854
No 110
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.96 E-value=0.23 Score=51.32 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=29.1
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..||+|||+|++|+.++..|+..|. +++++|.+
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESS
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCC-eEEEEEec
Confidence 3689999999999999999999995 78888865
No 111
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=89.96 E-value=1.5 Score=46.22 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=28.3
Q ss_pred cCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.++|||.|+ |+||.++++.|+..|. +++++|.+
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH-YVIASDWK 62 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECC
Confidence 468999996 9999999999999994 68888754
No 112
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.92 E-value=0.27 Score=51.08 Aligned_cols=36 Identities=25% Similarity=0.400 Sum_probs=32.0
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|..++|+|||+|++|..+++.|...|. +++++|..
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~ 189 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARS 189 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECC
Confidence 3678899999999999999999999997 78888854
No 113
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=89.90 E-value=0.94 Score=43.97 Aligned_cols=35 Identities=23% Similarity=0.146 Sum_probs=28.2
Q ss_pred hcCcEEEEc-CchHHHHHHHHHHHhC-CCeEEEEeCC
Q psy9783 18 KKSKVLVVG-AGGIGCELLKNLVLSG-FSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVG-aGgiGceiaknLal~G-v~~i~iiD~D 52 (726)
..++|+|.| .|+||.++++.|+..| -.++.+++.+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 356899998 6999999999999995 2467777754
No 114
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=89.89 E-value=0.94 Score=45.44 Aligned_cols=35 Identities=26% Similarity=0.470 Sum_probs=29.1
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 45 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDV 45 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36678888887 78999999999999996 5777764
No 115
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=89.88 E-value=1.4 Score=45.25 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=27.1
Q ss_pred CcEEEEc-CchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 20 SKVLVVG-AGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVG-aGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
++|||.| .|+||.++++.|+..|- .+++++|..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 5799999 69999999999999953 368887753
No 116
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=89.86 E-value=0.28 Score=49.41 Aligned_cols=32 Identities=25% Similarity=0.313 Sum_probs=28.7
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
||.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCc
Confidence 79999999999999999999996 788887653
No 117
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.82 E-value=0.28 Score=51.08 Aligned_cols=33 Identities=21% Similarity=0.554 Sum_probs=29.4
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
.||.|||+|.+|+.++..|+..|+ .+++++|.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 479999999999999999999997 678888853
No 118
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.67 E-value=0.23 Score=51.66 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=27.7
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.||+|||+|++|+.++..|++.|. +++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 689999999999999999999995 68887754
No 119
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.62 E-value=0.94 Score=44.82 Aligned_cols=36 Identities=25% Similarity=0.469 Sum_probs=29.8
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~ 42 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADIN 42 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCC
Confidence 35678899998 68999999999999996 47777643
No 120
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.60 E-value=0.3 Score=50.20 Aligned_cols=32 Identities=25% Similarity=0.573 Sum_probs=28.6
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 589999999999999999999997 68888754
No 121
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.57 E-value=0.27 Score=52.18 Aligned_cols=36 Identities=25% Similarity=0.541 Sum_probs=31.9
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+...||.|||+|.+|..++..|+..|+++|+++|-+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~ 38 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIA 38 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 345799999999999999999999998889998864
No 122
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=89.55 E-value=1.7 Score=44.33 Aligned_cols=32 Identities=38% Similarity=0.552 Sum_probs=26.9
Q ss_pred CcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
++|+|.| .|.||.++++.|+..| .+++++|..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDNL 34 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 4799998 5999999999999999 467777743
No 123
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.51 E-value=0.31 Score=51.71 Aligned_cols=38 Identities=24% Similarity=0.439 Sum_probs=31.2
Q ss_pred HHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 15 DLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 15 ~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+....||.|||+|.+|..++..|+..|...++++|.|
T Consensus 10 ~~~~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 10 TVIMRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 34455799999999999999999999999569999854
No 124
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=89.51 E-value=0.51 Score=47.41 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=28.1
Q ss_pred cCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
.++|+|.| .|+||.++++.|+..|. ++.++|.+.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSP 37 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCC
Confidence 45789998 79999999999999984 678877553
No 125
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.50 E-value=0.31 Score=49.60 Aligned_cols=31 Identities=29% Similarity=0.500 Sum_probs=27.7
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.+|+|||+|.+|+.++..|+..|. +++++|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEEC
Confidence 589999999999999999999995 6888764
No 126
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=89.46 E-value=1.1 Score=45.54 Aligned_cols=32 Identities=22% Similarity=0.372 Sum_probs=26.1
Q ss_pred cCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 19 KSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.++|||.| .|.||.++++.|+..|. ++++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r 35 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRT 35 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEec
Confidence 46899999 59999999999999885 4666553
No 127
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.46 E-value=0.36 Score=48.56 Aligned_cols=35 Identities=26% Similarity=0.556 Sum_probs=30.0
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+...+|.|||+|.+|..+++.|+..|+..+.++|.
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~ 42 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSR 42 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeC
Confidence 44579999999999999999999999765777763
No 128
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.28 E-value=0.27 Score=49.26 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=30.2
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCC---CeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGF---SNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv---~~i~iiD~D 52 (726)
..+|.|||+|.+|+.+++.|+..|+ ..++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 3589999999999999999999996 579998865
No 129
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=89.23 E-value=1.6 Score=44.64 Aligned_cols=32 Identities=28% Similarity=0.436 Sum_probs=26.6
Q ss_pred CcEEEEcC-chHHHHHHHHHHHh-CCCeEEEEeCC
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLS-GFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~-Gv~~i~iiD~D 52 (726)
++|||.|+ |.||.++++.|+.. | .+++++|..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH-YEVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT-CEEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 37999996 99999999999998 6 467777753
No 130
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.21 E-value=0.33 Score=50.09 Aligned_cols=32 Identities=25% Similarity=0.470 Sum_probs=28.4
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 479999999999999999999996 68888754
No 131
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.20 E-value=0.19 Score=51.96 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=29.6
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+..++++|+|+||+|..+++.|+..| +++++|.
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r 158 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANR 158 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC--CEEEEEC
Confidence 46789999999999999999999999 8988763
No 132
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=89.06 E-value=1.3 Score=44.40 Aligned_cols=31 Identities=29% Similarity=0.590 Sum_probs=26.0
Q ss_pred cEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 21 KVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 21 kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
+|+|.|+ |.||.++++.|. .| .+++++|.+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~~ 33 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PV-GNLIALDVHS 33 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TT-SEEEEECTTC
T ss_pred eEEEECCCCHHHHHHHHHhh-cC-CeEEEecccc
Confidence 7999996 999999999999 78 5688877543
No 133
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=88.81 E-value=1.3 Score=44.33 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=28.4
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA-RLLLFSR 39 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 4567888887 68999999999999996 5777764
No 134
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=88.71 E-value=0.66 Score=46.40 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=25.9
Q ss_pred CcEEEEcC-chHHHHHHHHHHHh--CCCeEEEEeC
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLS--GFSNIEIVDL 51 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~--Gv~~i~iiD~ 51 (726)
++|+|.|+ |.||.++++.|+.. | .++.+++.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r 34 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA-SQIIAIVR 34 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG-GGEEEEES
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC-CeEEEEEc
Confidence 47999996 99999999999988 7 46777764
No 135
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=88.69 E-value=1.8 Score=44.41 Aligned_cols=32 Identities=38% Similarity=0.614 Sum_probs=26.9
Q ss_pred cCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 19 KSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+++|||.| .|+||.++++.|+..|. ++.++|.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEec
Confidence 46899998 69999999999999995 5777664
No 136
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=88.59 E-value=1.4 Score=44.62 Aligned_cols=36 Identities=31% Similarity=0.463 Sum_probs=30.3
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 44 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRN 44 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56778899997 78999999999999996 57887744
No 137
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.59 E-value=0.39 Score=50.08 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=28.7
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..||+|||+|.+|+.++..|+..|. +++++|.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 3689999999999999999999995 58888754
No 138
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.58 E-value=0.35 Score=52.12 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=32.4
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+..++|+|+|+|++|..+++.+..+|. +++++|.+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~ 200 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDIN 200 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 4778999999999999999999999998 79998843
No 139
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=88.57 E-value=0.87 Score=47.72 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=27.8
Q ss_pred CcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+||||.| .|.||..+++.|+..|.-++..+|.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~ 34 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ 34 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 3799999 69999999999999997567776654
No 140
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.55 E-value=0.39 Score=51.17 Aligned_cols=34 Identities=38% Similarity=0.715 Sum_probs=30.6
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDL 51 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~ 51 (726)
...||.|+|+|.+|..++..|+..|+ ++|.++|.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 45689999999999999999999998 58999985
No 141
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.51 E-value=0.33 Score=51.39 Aligned_cols=35 Identities=31% Similarity=0.442 Sum_probs=31.7
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
...||.|||+|.+|+.++-.|+..|+++++++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 35689999999999999999999999889999865
No 142
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=88.51 E-value=0.4 Score=48.95 Aligned_cols=33 Identities=18% Similarity=0.400 Sum_probs=29.9
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
..|+|||+|..|+.+|..|++.|+ +++|+|...
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~-~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCC-cEEEEECCC
Confidence 579999999999999999999998 699999763
No 143
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.49 E-value=0.48 Score=50.18 Aligned_cols=36 Identities=28% Similarity=0.354 Sum_probs=31.3
Q ss_pred HHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 15 DLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 15 ~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
..|...+|.|||+|.+|..+++.|...|+ ++.+.|.
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~ 47 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLR 47 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECC
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEEC
Confidence 46788999999999999999999999996 5777664
No 144
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=88.49 E-value=0.44 Score=46.95 Aligned_cols=33 Identities=30% Similarity=0.459 Sum_probs=28.2
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|||+|.+|..+++.|+..|. +++++|.+
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~-~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGF-KVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3689999999999999999999996 57787743
No 145
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=88.41 E-value=0.45 Score=47.00 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=30.2
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
....|+|||+|..|++.|..|++.|. +++|+|..
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~-~v~lie~~ 35 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGV-RVGLLTQS 35 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEecC
Confidence 35689999999999999999999997 58898875
No 146
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=88.37 E-value=0.79 Score=47.79 Aligned_cols=35 Identities=29% Similarity=0.590 Sum_probs=28.9
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~ 41 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIR 41 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECC
Confidence 4567899998 58999999999999996 57777643
No 147
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.21 E-value=0.41 Score=49.91 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=27.1
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..||+|||+|++|+.++..|+ .| .++++++.+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g-~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LY-HDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT-SEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cC-CceEEEECC
Confidence 468999999999999999999 88 467777643
No 148
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=88.21 E-value=0.43 Score=50.67 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=29.9
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.||.|||+|.+|..++..|+..|..+++++|.|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998559999865
No 149
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=88.16 E-value=0.47 Score=50.80 Aligned_cols=36 Identities=31% Similarity=0.553 Sum_probs=32.8
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCcc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTI 54 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~I 54 (726)
...|+|||+|..|+..|-.|++.|..+++|+|.+.+
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 457999999999999999999999878999998766
No 150
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.06 E-value=0.4 Score=51.26 Aligned_cols=35 Identities=34% Similarity=0.577 Sum_probs=31.7
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+...+|+|+|+|++|..++..|..+|. +++++|.+
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~ 199 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDIN 199 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 567899999999999999999999999 89998743
No 151
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.04 E-value=0.4 Score=51.36 Aligned_cols=34 Identities=24% Similarity=0.483 Sum_probs=31.2
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+..++|+|+|+|++|..+++.|...|. +++++|.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~ 197 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV 197 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 678899999999999999999999998 7888874
No 152
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=88.02 E-value=1.4 Score=45.21 Aligned_cols=36 Identities=25% Similarity=0.495 Sum_probs=29.8
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCC------CeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGF------SNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv------~~i~iiD~D 52 (726)
+..++|||.| .|+||.++++.|+..|. .+++++|.+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 4556899999 69999999999999994 578887754
No 153
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=88.01 E-value=0.48 Score=47.43 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=27.2
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+|.|||+|.+|+.++..|+..|..+++++|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r 32 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANR 32 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECC
Confidence 7999999999999999999999656777763
No 154
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.00 E-value=0.38 Score=54.08 Aligned_cols=35 Identities=23% Similarity=0.384 Sum_probs=31.5
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|+|+|+||..+++.|+..|. ++.++|.+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 567899999999999999999999998 78888754
No 155
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=87.99 E-value=0.47 Score=50.58 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=31.7
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
..+|+|||+|..|+.+|..|++.|+.+++|+|...
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 46899999999999999999999987799999754
No 156
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=87.93 E-value=1.3 Score=44.53 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=27.9
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
=..++|||.| .|.||.++++.|+..| .+++++|.+
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 45 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKN-VEVIPTDVQ 45 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTT
T ss_pred cccceEEEECCCChHHHHHHHHHHhCC-CeEEeccCc
Confidence 3457899998 6999999999999998 467777754
No 157
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.81 E-value=0.47 Score=49.59 Aligned_cols=33 Identities=45% Similarity=0.529 Sum_probs=29.3
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
.||.|||+|.+|..++..|+..|. ++++++|.|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 379999999999999999999995 579999865
No 158
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.80 E-value=0.48 Score=47.92 Aligned_cols=30 Identities=37% Similarity=0.373 Sum_probs=26.9
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+|.|||+|.+|+.+++.|+..|. +++++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 79999999999999999999997 6777764
No 159
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=87.70 E-value=0.52 Score=49.17 Aligned_cols=36 Identities=28% Similarity=0.480 Sum_probs=31.8
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTID 55 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie 55 (726)
...|+|||+|.+|+.+|-.|++.|. +++|+|.+.+-
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~~ 41 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGY-SVHILARDLPE 41 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCCC
Confidence 4579999999999999999999996 69999987653
No 160
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=87.69 E-value=1.2 Score=44.52 Aligned_cols=31 Identities=26% Similarity=0.479 Sum_probs=26.5
Q ss_pred CcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 20 SKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 20 ~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.+|||.| .|.||.++++.|+..|. ++++++.
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEY-DIYPFDK 37 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTE-EEEEECT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC-EEEEecc
Confidence 3799999 59999999999999884 6777775
No 161
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=87.59 E-value=0.42 Score=49.14 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=30.2
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+..++++|+| +||+|..+++.|+..|.. ++++|.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R 151 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGR 151 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEEC
Confidence 4678999999 999999999999999976 888874
No 162
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=87.50 E-value=1.4 Score=44.68 Aligned_cols=37 Identities=22% Similarity=0.419 Sum_probs=26.8
Q ss_pred HHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 15 DLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 15 ~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+..++++|.| .||||.++++.|+..|.. +.++|.+
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~ 57 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCARD 57 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 345667788887 689999999999999964 7777643
No 163
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.49 E-value=0.51 Score=50.26 Aligned_cols=34 Identities=26% Similarity=0.532 Sum_probs=30.3
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
..||.|||+|.+|+.++..|+..|+ ++|+++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4689999999999999999999997 589999853
No 164
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=87.47 E-value=0.53 Score=49.18 Aligned_cols=36 Identities=25% Similarity=0.519 Sum_probs=31.9
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTID 55 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie 55 (726)
...|+|||+|.+|+.+|..|++.|.. ++|+|.+.+-
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~-V~lle~~~~~ 40 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEE-VTVIEKRFIG 40 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCCCC
Confidence 46899999999999999999999975 9999987543
No 165
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=87.36 E-value=0.38 Score=49.86 Aligned_cols=35 Identities=29% Similarity=0.460 Sum_probs=31.3
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
..+|+|||+|..|..+|..|++.|..+++|+|.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 45799999999999999999999975799999764
No 166
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=87.35 E-value=0.43 Score=53.31 Aligned_cols=40 Identities=23% Similarity=0.368 Sum_probs=36.4
Q ss_pred HHHhcCcEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCcc
Q psy9783 15 DLIKKSKVLVVGAGGIGCELLKNLVLSGF--SNIEIVDLDTI 54 (726)
Q Consensus 15 ~kL~~~kVlvVGaGgiGceiaknLal~Gv--~~i~iiD~D~I 54 (726)
++|.+.||++.|+|+.|+.+++.|+..|+ ++|.++|..-+
T Consensus 215 k~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 215 KDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 36888999999999999999999999999 79999997654
No 167
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.35 E-value=0.46 Score=50.04 Aligned_cols=36 Identities=33% Similarity=0.611 Sum_probs=31.4
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
+...||.|||+|.+|..++-.|+..|. .+|.++|-+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 456799999999999999999999986 679999854
No 168
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=87.31 E-value=0.45 Score=51.09 Aligned_cols=37 Identities=24% Similarity=0.422 Sum_probs=32.2
Q ss_pred HHhcCcEEEEcC-chHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 16 LIKKSKVLVVGA-GGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGa-GgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
.+...||.|||+ |.+|..++-.|+..|. .+|.++|-+
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 356789999997 9999999999999997 589999854
No 169
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=87.18 E-value=2.4 Score=46.56 Aligned_cols=34 Identities=21% Similarity=0.167 Sum_probs=27.3
Q ss_pred hcCcEEEEc-CchHHHHHHHHHHHhCC--CeEEEEeC
Q psy9783 18 KKSKVLVVG-AGGIGCELLKNLVLSGF--SNIEIVDL 51 (726)
Q Consensus 18 ~~~kVlvVG-aGgiGceiaknLal~Gv--~~i~iiD~ 51 (726)
..++|||.| .|+||.++++.|+..+- .++.+++.
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R 108 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVR 108 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 467899999 59999999999999831 46777663
No 170
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.17 E-value=0.58 Score=47.47 Aligned_cols=32 Identities=41% Similarity=0.572 Sum_probs=27.7
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDL 51 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~ 51 (726)
++|.|||+|.+|..+++.|+..|.. ++.++|.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4799999999999999999999963 6777764
No 171
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=87.14 E-value=0.51 Score=49.62 Aligned_cols=32 Identities=31% Similarity=0.379 Sum_probs=28.7
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDL 51 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~ 51 (726)
.||.|||+|+||..++-.|+..|. ++|.|+|-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di 33 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 489999999999999999999886 78999983
No 172
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=87.09 E-value=0.56 Score=49.78 Aligned_cols=38 Identities=24% Similarity=0.269 Sum_probs=31.2
Q ss_pred HHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 15 DLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 15 ~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
+.....+|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~E~~~ 56 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGI-DCDVYEAVK 56 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 44567799999999999999999999997 599999764
No 173
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=87.00 E-value=1.3 Score=44.67 Aligned_cols=34 Identities=38% Similarity=0.618 Sum_probs=27.5
Q ss_pred cCcEEEEcC-chHHHHHHHHHHHh-CCCeEEEEeCC
Q psy9783 19 KSKVLVVGA-GGIGCELLKNLVLS-GFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGa-GgiGceiaknLal~-Gv~~i~iiD~D 52 (726)
+++|||.|+ |.||.++++.|+.. |-.+++++|.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 37 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIR 37 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 468999996 99999999999998 32468887754
No 174
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.94 E-value=0.52 Score=49.39 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=29.4
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCC---CeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGF---SNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv---~~i~iiD~D 52 (726)
+...+|.|||+|.+|+.++..|+..|+ ..++++|.+
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 344689999999999999999999995 578887643
No 175
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=86.93 E-value=1.7 Score=44.70 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=28.7
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r 63 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDV 63 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 5677899998 68999999999999996 5777764
No 176
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=86.88 E-value=0.58 Score=48.34 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=28.9
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 4689999999999999999999996 68887754
No 177
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=86.85 E-value=0.54 Score=49.01 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=31.6
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTID 55 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie 55 (726)
...|+|||+|..|+.+|..|++.|. +++|+|.+.+-
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~-~V~llE~~~~~ 52 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENK-NTALFESGTMG 52 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCCCC
Confidence 4579999999999999999999997 69999987543
No 178
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=86.81 E-value=0.53 Score=50.49 Aligned_cols=34 Identities=35% Similarity=0.536 Sum_probs=26.4
Q ss_pred chhhhhhhhchhhhhhccccCcchhhhHHHHHHh
Q psy9783 136 TSIIRFLHLNRQFLFHKQHVGKSKAQVARNSALN 169 (726)
Q Consensus 136 ~~~~~~~~l~~q~l~~~~hvg~sk~~~ak~~~~~ 169 (726)
....+..|||||++|...++|++|+.++++.+..
T Consensus 150 ~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~ 183 (353)
T 3h5n_A 150 NDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLK 183 (353)
T ss_dssp CCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred CCcCcccccccccCCChHHCCChHHHHHHHHHHH
Confidence 3445677888888888888888888888777754
No 179
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=86.79 E-value=0.61 Score=46.30 Aligned_cols=36 Identities=31% Similarity=0.507 Sum_probs=30.6
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|...+.++|.+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~ 39 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRV 39 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecC
Confidence 4567899997 78999999999999998778888743
No 180
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=86.78 E-value=0.6 Score=47.75 Aligned_cols=33 Identities=30% Similarity=0.463 Sum_probs=29.0
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
.+|.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 589999999999999999999995 688887653
No 181
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=86.70 E-value=0.59 Score=49.12 Aligned_cols=33 Identities=30% Similarity=0.633 Sum_probs=28.7
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
.||.|||+|.+|+.++..|+..|. ++++++|.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 379999999999999999999995 478888754
No 182
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.62 E-value=0.58 Score=45.23 Aligned_cols=30 Identities=27% Similarity=0.421 Sum_probs=26.7
Q ss_pred cEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 21 KVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 21 kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
||+|+| +|.+|+.+++.|+..|. +++++|.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r 32 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSR 32 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 799999 99999999999999995 6777764
No 183
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=86.56 E-value=0.4 Score=50.06 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=30.9
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
...|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~-~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGL-KTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 4579999999999999999999998 699999876
No 184
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=86.41 E-value=0.42 Score=49.62 Aligned_cols=35 Identities=20% Similarity=0.401 Sum_probs=31.0
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCcc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTI 54 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~I 54 (726)
...|+|||+|.+|+.+|..|++.|. +++|+|.+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~-~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGL-NVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTC-CEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCC
Confidence 3579999999999999999999997 5999998754
No 185
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=86.31 E-value=0.56 Score=47.89 Aligned_cols=33 Identities=27% Similarity=0.420 Sum_probs=28.6
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 3589999999999999999999996 68887753
No 186
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.24 E-value=0.43 Score=47.77 Aligned_cols=36 Identities=39% Similarity=0.595 Sum_probs=30.4
Q ss_pred HHhcCcEEEEcC-c-hHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGA-G-GIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGa-G-giGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.|+ | |||.++++.|+..|.. +.++|.+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecCC
Confidence 367889999998 7 8999999999999964 7787754
No 187
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=86.18 E-value=0.64 Score=48.35 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=30.3
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
.-.+|.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 34689999999999999999999996 688888653
No 188
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.18 E-value=0.77 Score=43.81 Aligned_cols=32 Identities=22% Similarity=0.419 Sum_probs=27.0
Q ss_pred CcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+||+|.|+ |+||.++++.|+..| .++++++.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEcC
Confidence 37999995 999999999999999 467777643
No 189
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.10 E-value=0.67 Score=48.68 Aligned_cols=33 Identities=39% Similarity=0.577 Sum_probs=29.3
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~D 52 (726)
.+|.|||+|.+|..+++.|...|.. ++.++|.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 6899999999999999999999974 78887744
No 190
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=86.10 E-value=2.5 Score=43.07 Aligned_cols=32 Identities=19% Similarity=0.377 Sum_probs=26.1
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEE-EEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIE-IVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~-iiD~D 52 (726)
.||+|+|||.+|..+++.+...+- .|. ++|.+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~ 36 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIENT 36 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSS
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecC
Confidence 589999999999999999998875 554 35543
No 191
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=86.09 E-value=0.63 Score=48.08 Aligned_cols=32 Identities=22% Similarity=0.430 Sum_probs=28.6
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 689999999999999999999997 58888754
No 192
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=85.97 E-value=0.64 Score=48.85 Aligned_cols=32 Identities=19% Similarity=0.503 Sum_probs=29.1
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
||.|||+|.+|..++-.|+..|+++|.++|-+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 69999999999999999999999669999854
No 193
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=85.91 E-value=0.72 Score=45.84 Aligned_cols=32 Identities=25% Similarity=0.256 Sum_probs=29.4
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|+|||+|..|...|..|++.|+ +++|+|..
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARK-NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence 579999999999999999999996 79999965
No 194
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=85.89 E-value=0.42 Score=50.13 Aligned_cols=47 Identities=13% Similarity=0.065 Sum_probs=34.5
Q ss_pred ccccCHHHHHHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 6 PGVFEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 6 ~~~~g~~~q~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+.+..-.-...+|.|||+|.+|..++++|+..|..+++++|.+
T Consensus 11 ~~~~~~~~~~~~M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 11 VDLGTENLYFQSMMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp ----CCCHHHHTSCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred cccCcccCcccccCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34555555433345789999999999999999999995578888855
No 195
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=85.87 E-value=0.56 Score=49.80 Aligned_cols=35 Identities=23% Similarity=0.520 Sum_probs=31.1
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
...+|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 59 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGI-DVSVYERDN 59 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 45689999999999999999999997 799999763
No 196
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=85.81 E-value=0.66 Score=48.37 Aligned_cols=34 Identities=32% Similarity=0.362 Sum_probs=30.6
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCcc
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTI 54 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~I 54 (726)
..|+|||+|.+|+.+|..|++.|. +++|+|.+.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~-~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCC
Confidence 479999999999999999999996 5999998754
No 197
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=85.70 E-value=0.72 Score=48.18 Aligned_cols=31 Identities=29% Similarity=0.567 Sum_probs=25.7
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEE
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIV 49 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~ii 49 (726)
...||+|||+|++|+.++..|+..|. .++++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE
Confidence 56789999999999999999999995 56554
No 198
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=85.70 E-value=0.88 Score=47.26 Aligned_cols=38 Identities=16% Similarity=0.172 Sum_probs=28.5
Q ss_pred ccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCc
Q psy9783 192 YFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGY 231 (726)
Q Consensus 192 ~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~ 231 (726)
.+.++|+||+++. .++-...-..|.++++|+|- ||.|+
T Consensus 70 ll~~~DVVIDfT~-p~a~~~~~~~al~~G~~vVi-gTTG~ 107 (272)
T 4f3y_A 70 VCAEADYLIDFTL-PEGTLVHLDAALRHDVKLVI-GTTGF 107 (272)
T ss_dssp HHHHCSEEEECSC-HHHHHHHHHHHHHHTCEEEE-CCCCC
T ss_pred HhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEE-ECCCC
Confidence 4557899999984 45555566789999999885 66665
No 199
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=85.66 E-value=0.69 Score=49.17 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=32.0
Q ss_pred HHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 15 DLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 15 ~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..|.+++|.|||+|.||..+++.|...|+ ++..+|..
T Consensus 133 ~~l~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr~ 169 (324)
T 3evt_A 133 STLTGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNTT 169 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccccCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECCC
Confidence 35788999999999999999999999987 57777754
No 200
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=85.63 E-value=0.64 Score=49.32 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=30.6
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|..++|.|||+|.+|..+++.|...|. ++.++|.
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~ 181 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSR 181 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECC
Confidence 4778899999999999999999999885 5777764
No 201
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=85.62 E-value=1.4 Score=43.74 Aligned_cols=32 Identities=28% Similarity=0.567 Sum_probs=26.6
Q ss_pred CcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
++|+|.|+ |+||.++++.|+..| .+++++|.+
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDIV 35 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTE-EEEEECCSS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 47999996 999999999999988 467776643
No 202
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=85.61 E-value=0.64 Score=47.97 Aligned_cols=30 Identities=27% Similarity=0.381 Sum_probs=27.3
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
-|+|||+|..|+.+|..|++.|+. ++|+|.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~-V~v~Er 35 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLK-TLMIEK 35 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc-EEEEeC
Confidence 499999999999999999999985 888885
No 203
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=85.57 E-value=0.67 Score=47.89 Aligned_cols=30 Identities=33% Similarity=0.458 Sum_probs=27.1
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
||.|||+|.+|+.++..|+..|. +++++|.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEEc
Confidence 79999999999999999999995 6888775
No 204
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=85.57 E-value=0.73 Score=48.45 Aligned_cols=33 Identities=30% Similarity=0.606 Sum_probs=29.4
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
.||.|||+|.+|..++..|+..|. ++|.++|-+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 689999999999999999999885 689999854
No 205
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=85.54 E-value=0.66 Score=48.87 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=30.4
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.||..+++.|...|. ++..+|.
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 173 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDI 173 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECC
Confidence 4778999999999999999999999995 5777763
No 206
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=85.51 E-value=0.66 Score=47.76 Aligned_cols=34 Identities=18% Similarity=0.505 Sum_probs=29.3
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCC--eEEEEeC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFS--NIEIVDL 51 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~--~i~iiD~ 51 (726)
...+|.|||+|.+|..+++.|+..|+. +++++|.
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr 37 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNR 37 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeC
Confidence 357899999999999999999999962 6888764
No 207
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=85.51 E-value=0.74 Score=48.89 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=30.7
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.||..+++.|...|+ ++..+|.
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~ 177 (333)
T 1j4a_A 143 EVRDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDI 177 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 4788999999999999999999998886 5777764
No 208
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=85.49 E-value=3.2 Score=41.93 Aligned_cols=36 Identities=28% Similarity=0.326 Sum_probs=30.5
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.++.++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~ 44 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC 44 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence 46778899998 68999999999999996 58888865
No 209
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=85.45 E-value=0.68 Score=48.53 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=31.8
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|.|||+|.||..+++.|...|+ ++..+|..
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~ 154 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRS 154 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred eeecchheeeccCchhHHHHHHHHhhCc-EEEEEecc
Confidence 4788999999999999999999999997 57787754
No 210
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.44 E-value=0.75 Score=48.62 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=29.7
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.||.|||+|.+|..++..|+..|...+.++|-|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 589999999999999999999998559999854
No 211
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=85.42 E-value=2.8 Score=42.64 Aligned_cols=34 Identities=32% Similarity=0.555 Sum_probs=28.0
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEe
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD 50 (726)
.+.++.++|.| .||||.++++.|+..|. ++.++|
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~ 60 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF-DIAITG 60 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEe
Confidence 34567788887 68999999999999996 577776
No 212
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=85.39 E-value=0.77 Score=48.60 Aligned_cols=34 Identities=29% Similarity=0.447 Sum_probs=31.0
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~D 52 (726)
.+||+|||+|.-|...|+.|.+.|-+ +|+|||..
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCC
Confidence 58999999999999999999999975 89999864
No 213
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=85.39 E-value=0.64 Score=47.33 Aligned_cols=31 Identities=32% Similarity=0.522 Sum_probs=27.5
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 79999999999999999999996 58887754
No 214
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.36 E-value=0.55 Score=49.91 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=30.8
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.+|..+++.|...|. ++.++|.
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~ 177 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSR 177 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 5788999999999999999999998886 6777774
No 215
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=85.36 E-value=0.65 Score=47.68 Aligned_cols=32 Identities=25% Similarity=0.606 Sum_probs=28.6
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999996 68888754
No 216
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=85.28 E-value=0.75 Score=48.38 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=30.5
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
+...+|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~-~v~viE~~~ 44 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGW-DVRLHEKSS 44 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence 345789999999999999999999996 699998654
No 217
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=85.22 E-value=0.77 Score=48.07 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=28.1
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
...||.|||+|.+|+.++..|+..|. +++++|.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~-~V~~~~r 45 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGE-EVILWAR 45 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCC-eEEEEeC
Confidence 45789999999999999999999995 6777763
No 218
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=85.09 E-value=0.65 Score=50.62 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=31.4
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+...+|+|+|+|++|..+++.+..+|. +++++|..
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~ 204 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTR 204 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 557899999999999999999999997 79998854
No 219
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.08 E-value=0.76 Score=48.63 Aligned_cols=33 Identities=27% Similarity=0.568 Sum_probs=28.6
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
-.+|.|||+|.+|+.++..|+..|+ +++++|.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4689999999999999999999997 58888754
No 220
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=85.08 E-value=0.82 Score=46.71 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=28.2
Q ss_pred hcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+++|||.|+ |+||.++++.|+..|. ++.++|.+
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 36 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRR 36 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 4678999996 9999999999999994 67777643
No 221
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=85.01 E-value=0.76 Score=48.36 Aligned_cols=34 Identities=32% Similarity=0.423 Sum_probs=30.1
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
+.+|+|||+|..|+.+|..|++.|+ +++|+|...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGI-DNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 3589999999999999999999997 489998654
No 222
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=84.95 E-value=0.6 Score=49.41 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=31.4
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|.|||+|.+|..+++.|...|+ ++.++|..
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~ 187 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGR 187 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 4778899999999999999999999887 58888843
No 223
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=84.92 E-value=0.65 Score=49.18 Aligned_cols=35 Identities=37% Similarity=0.545 Sum_probs=31.2
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCcc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTI 54 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~I 54 (726)
+..|+|||+|..|+.+|..|++.|+ +++|+|.+..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGF-KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTC-CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCCC
Confidence 3589999999999999999999998 6999998753
No 224
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=84.86 E-value=0.56 Score=47.77 Aligned_cols=33 Identities=30% Similarity=0.381 Sum_probs=29.7
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|||+|..|+.+|..|++.|+ +++|+|..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~vie~~ 35 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGL-SYVILDAE 35 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSC-CEEEECCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 4589999999999999999999997 59999865
No 225
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=84.85 E-value=0.78 Score=45.88 Aligned_cols=32 Identities=19% Similarity=0.466 Sum_probs=28.2
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCC---CeEEEEeC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGF---SNIEIVDL 51 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv---~~i~iiD~ 51 (726)
.||.|||+|.+|..+++.|+..|. .+++++|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeC
Confidence 589999999999999999999997 37777764
No 226
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=84.82 E-value=0.74 Score=49.83 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=31.0
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|..++|+|+|+|.+|..+++.|...|. ++++.|.|
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~ 205 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVN 205 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 677899999999999999999999998 57788843
No 227
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=84.81 E-value=2.4 Score=43.28 Aligned_cols=31 Identities=23% Similarity=0.439 Sum_probs=24.8
Q ss_pred cEEEEcC-chHHHHHHHHHHHh-CCCeEEEEeC
Q psy9783 21 KVLVVGA-GGIGCELLKNLVLS-GFSNIEIVDL 51 (726)
Q Consensus 21 kVlvVGa-GgiGceiaknLal~-Gv~~i~iiD~ 51 (726)
||+|+|| |.+|..+++.+... |+.=+-++|.
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 7999997 99999999998866 7654456664
No 228
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=84.80 E-value=0.73 Score=49.19 Aligned_cols=38 Identities=21% Similarity=0.520 Sum_probs=31.9
Q ss_pred HHHhcCcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 15 DLIKKSKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 15 ~kL~~~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
......||.|||+|.+|..++-.|+..|. .++.++|-+
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 35567899999999999999999999997 479999853
No 229
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=84.78 E-value=0.77 Score=49.71 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=30.1
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
.+|+|||+|..|+.+|..|++.|+ +++|+|...
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDV-DVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCC-eEEEEcCCC
Confidence 589999999999999999999997 699999764
No 230
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=84.77 E-value=0.77 Score=47.09 Aligned_cols=33 Identities=21% Similarity=0.490 Sum_probs=30.1
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
...|+|||+|..|+.+|..|++.|. +++|+|.+
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~-~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGH-EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 3579999999999999999999997 69999987
No 231
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=84.68 E-value=0.76 Score=48.24 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=30.6
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|..++|.|||+|.||..+++.|...|. ++..+|.
T Consensus 139 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~ 173 (307)
T 1wwk_A 139 ELEGKTIGIIGFGRIGYQVAKIANALGM-NILLYDP 173 (307)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred ccCCceEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 5788999999999999999999999885 5777764
No 232
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=84.65 E-value=3.1 Score=44.56 Aligned_cols=30 Identities=27% Similarity=0.286 Sum_probs=24.3
Q ss_pred CcEEEEcC-chHHHHHHHHHHHhCCCeEEEEe
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD 50 (726)
++|||.|+ |+||.++++.|+..|. ++.+++
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~ 100 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGYSH-RIYCFI 100 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTTEE-EEEEEE
T ss_pred CEEEEecCCcHHHHHHHHHHHcCCC-EEEEEE
Confidence 37999995 9999999999977774 566654
No 233
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=84.57 E-value=0.89 Score=48.60 Aligned_cols=33 Identities=21% Similarity=0.471 Sum_probs=30.1
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~ 51 (726)
..||.|||+|.+|..++-.|+..|+ +++.++|-
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di 54 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDV 54 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 4689999999999999999999998 68999985
No 234
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.50 E-value=0.9 Score=47.61 Aligned_cols=33 Identities=24% Similarity=0.437 Sum_probs=29.4
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.||.|||+|.+|..++-.|+..|.-.+.++|-|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 589999999999999999999997459999854
No 235
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=84.49 E-value=0.77 Score=46.82 Aligned_cols=32 Identities=31% Similarity=0.523 Sum_probs=28.2
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.|||+|.+|+.+++.|+..|. ++.++|.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 589999999999999999999996 57887754
No 236
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=84.46 E-value=0.67 Score=52.15 Aligned_cols=35 Identities=29% Similarity=0.413 Sum_probs=27.0
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.+.+++++|+|+||+|..+++.|+..|+ ++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~G~-~V~i~~R 395 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEKGA-KVVIANR 395 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHHCC--CEEEES
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 3567899999999999999999999998 7888764
No 237
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=84.42 E-value=0.93 Score=44.39 Aligned_cols=35 Identities=31% Similarity=0.452 Sum_probs=29.3
Q ss_pred HhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~ 40 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRT 40 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46778999985 8999999999999996 57777643
No 238
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=84.42 E-value=0.66 Score=50.03 Aligned_cols=36 Identities=28% Similarity=0.376 Sum_probs=31.5
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.||..+++.|...|..++..+|.
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~ 196 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDY 196 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECS
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 478899999999999999999999888765877774
No 239
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=84.40 E-value=0.73 Score=48.78 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=31.5
Q ss_pred HHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 15 DLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 15 ~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..|.+++|.|||+|.||..+++.|...|+ ++..+|..
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~ 171 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRS 171 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 34778999999999999999999998887 57777753
No 240
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=84.33 E-value=0.81 Score=48.19 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=31.6
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|.|||+|.||..+++.|...|. ++..+|..
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~ 176 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGM-RVVYHART 176 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCC-EEEEECCC
Confidence 4788999999999999999999999886 68888754
No 241
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=84.27 E-value=0.78 Score=47.66 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=29.4
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
...+|.|||+|.+|..++++|+..|. +++++|.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~ 41 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRS 41 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 35689999999999999999999997 57787754
No 242
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=84.26 E-value=0.85 Score=48.40 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=30.4
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
..+|+|||+|..|+.+|..|++.|+ +++|+|...
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 4689999999999999999999997 699998754
No 243
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=84.18 E-value=0.83 Score=45.73 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=27.5
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.++|||.|+|.||.++++.|...|. +++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSR 36 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEES
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEc
Confidence 4789999999999999999999985 5777653
No 244
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=84.16 E-value=0.92 Score=51.38 Aligned_cols=33 Identities=27% Similarity=0.289 Sum_probs=29.0
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
.+++|||.|.||+|++..|++.|.. +||+..+.
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~-VTii~~~~ 256 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYD-VTVAVRSI 256 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCC-EEEEESSC
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCe-EEEecccc
Confidence 6899999999999999999999975 78876543
No 245
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=84.16 E-value=0.93 Score=48.18 Aligned_cols=36 Identities=25% Similarity=0.201 Sum_probs=31.5
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|..++|.|||+|.||..+++.|...|+ ++..+|..
T Consensus 142 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~ 177 (333)
T 1dxy_A 142 ELGQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPY 177 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 4788999999999999999999998886 47787754
No 246
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=84.13 E-value=0.94 Score=48.40 Aligned_cols=35 Identities=23% Similarity=0.475 Sum_probs=31.9
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~D~ 53 (726)
+++|+|||+|..|...|..|.+.|.. +|+|+|...
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 36899999999999999999999985 899999765
No 247
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=84.10 E-value=0.78 Score=47.98 Aligned_cols=34 Identities=18% Similarity=0.479 Sum_probs=29.4
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
...+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 34589999999999999999999996 58887754
No 248
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=84.03 E-value=1 Score=44.10 Aligned_cols=35 Identities=34% Similarity=0.447 Sum_probs=29.4
Q ss_pred HhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.|+ |+||.++++.|+..|. ++.++|.+
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~ 40 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRT 40 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56788999985 9999999999999996 57887743
No 249
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=84.03 E-value=0.67 Score=46.85 Aligned_cols=30 Identities=23% Similarity=0.392 Sum_probs=26.2
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.+|.|||+|.+|+.+++.|+. |. +++++|.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeC
Confidence 479999999999999999999 86 4777764
No 250
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=84.03 E-value=0.47 Score=49.73 Aligned_cols=34 Identities=21% Similarity=0.315 Sum_probs=29.3
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCC------CeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGF------SNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv------~~i~iiD~D 52 (726)
..||.|||+|.+|+.++..|+..|. .+++++|.+
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 3589999999999999999999993 468888754
No 251
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=84.01 E-value=0.35 Score=47.78 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=28.2
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+.+|+|+|+|.+|..+++.|...|. ++++|.|
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~ 40 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV--FVLAEDE 40 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE--EEEESCG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe--EEEEECC
Confidence 35689999999999999999999887 8898865
No 252
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=84.00 E-value=0.98 Score=45.63 Aligned_cols=37 Identities=32% Similarity=0.445 Sum_probs=29.3
Q ss_pred HHhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 16 LIKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 16 kL~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
.+..++|||.|+ |.||.++++.|+..|. +++++|...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCC
Confidence 356789999997 9999999999999995 677776543
No 253
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=83.96 E-value=0.98 Score=47.58 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=30.6
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCcc
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTI 54 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~I 54 (726)
..|+|||+|.+|+.+|..|++.|.. ++|+|...+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~-V~vlE~~~~ 38 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHR-VLVLERHTF 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEESSCT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCCC
Confidence 5799999999999999999999974 999997754
No 254
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=83.96 E-value=0.83 Score=48.48 Aligned_cols=36 Identities=25% Similarity=0.174 Sum_probs=31.5
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|..++|.|||+|.||..+++.|...|+ ++..+|..
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~ 178 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGA-TVIGEDVF 178 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 5788999999999999999999998886 47787754
No 255
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=83.88 E-value=0.98 Score=47.32 Aligned_cols=33 Identities=30% Similarity=0.350 Sum_probs=29.2
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~D 52 (726)
.||.|+|+|.+|..++..|+..|.. +++++|-+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 3799999999999999999999974 89998854
No 256
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=83.85 E-value=0.73 Score=49.13 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=31.1
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|..++|.|||+|.+|..+++.|...|. ++.++|..
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~dr~ 196 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDC-PISYFSRS 196 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 4778899999999999999999998886 57887754
No 257
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=83.75 E-value=0.82 Score=47.29 Aligned_cols=32 Identities=34% Similarity=0.625 Sum_probs=28.9
Q ss_pred CcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.||| +|.+|..+++.|+..|. +++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 5899999 99999999999999997 68888855
No 258
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=83.73 E-value=0.97 Score=50.35 Aligned_cols=35 Identities=26% Similarity=0.406 Sum_probs=31.3
Q ss_pred cCcEEEEcCchHHHHHHHHHHH---hCCCeEEEEeCCcc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVL---SGFSNIEIVDLDTI 54 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal---~Gv~~i~iiD~D~I 54 (726)
..+|+|||+|..|+.+|-.|++ .|+ +++|||.+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQA-NITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSC-EEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCC-EEEEECCCCC
Confidence 4689999999999999999999 897 7999998754
No 259
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=83.72 E-value=0.61 Score=47.39 Aligned_cols=30 Identities=23% Similarity=0.428 Sum_probs=27.1
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEe
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD 50 (726)
.+|.|||+|.+|+.+++.|+..|. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC-EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc
Confidence 489999999999999999999996 678877
No 260
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=83.62 E-value=1 Score=48.04 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=30.8
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.||..+|+.|...|. ++..+|.
T Consensus 138 ~l~g~tvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~ 172 (334)
T 2pi1_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGM-KVLCYDV 172 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred eccCceEEEECcCHHHHHHHHHHHHCcC-EEEEECC
Confidence 5789999999999999999999998886 5777764
No 261
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=83.60 E-value=0.97 Score=46.15 Aligned_cols=31 Identities=19% Similarity=0.517 Sum_probs=27.3
Q ss_pred CcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.+|.|||+ |.+|+.+++.|+..|. +++++|.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 48999999 9999999999999996 6777763
No 262
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=83.56 E-value=1.7 Score=43.18 Aligned_cols=30 Identities=20% Similarity=0.368 Sum_probs=25.4
Q ss_pred cEEEEcC-chHHHHHHHHHHHh--CCCeEEEEeC
Q psy9783 21 KVLVVGA-GGIGCELLKNLVLS--GFSNIEIVDL 51 (726)
Q Consensus 21 kVlvVGa-GgiGceiaknLal~--Gv~~i~iiD~ 51 (726)
+|+|.|+ |+||.++++.|+.. |. ++++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEc
Confidence 5899996 99999999999988 74 6777774
No 263
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=83.54 E-value=0.97 Score=47.38 Aligned_cols=32 Identities=28% Similarity=0.472 Sum_probs=28.0
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
..++|.|||+|-+|+-+|.+|+ +|+ .++++|.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~ 42 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDV 42 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECS
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEEC
Confidence 4679999999999999999999 997 6888874
No 264
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.50 E-value=0.83 Score=46.38 Aligned_cols=39 Identities=28% Similarity=0.440 Sum_probs=34.5
Q ss_pred chhhhhhhhchhhhhhccccCcchhhhHHHHHHhhCCCC
Q psy9783 136 TSIIRFLHLNRQFLFHKQHVGKSKAQVARNSALNFNPDA 174 (726)
Q Consensus 136 ~~~~~~~~l~~q~l~~~~hvg~sk~~~ak~~~~~~np~~ 174 (726)
...++..|||||++|...++|++|+..+++.+...||++
T Consensus 63 ~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~ 101 (249)
T 1jw9_B 63 FDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHI 101 (249)
T ss_dssp CCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTS
T ss_pred CCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCc
Confidence 345677899999999999999999999999999999874
No 265
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=83.46 E-value=1 Score=47.65 Aligned_cols=33 Identities=27% Similarity=0.533 Sum_probs=29.5
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
.||.|+|+|.+|..++..|+..|+ ++++++|-+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIK 34 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCc
Confidence 479999999999999999999997 589999854
No 266
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=83.44 E-value=1.1 Score=47.22 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=30.4
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
..||.|||+|.+|..++-.|+..|. ++|.++|-|
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999886 689999965
No 267
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=83.42 E-value=1.6 Score=43.43 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=27.2
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHH---hCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVL---SGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal---~Gv~~i~iiD~ 51 (726)
|.+++++|.| .||||.++++.|+. .|. ++.++|.
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r 41 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSAR 41 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEES
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeC
Confidence 4556777777 78999999999998 786 6777764
No 268
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=83.32 E-value=0.9 Score=47.63 Aligned_cols=37 Identities=22% Similarity=0.416 Sum_probs=32.2
Q ss_pred cCcEEEEcCchHHHHHHHHHHH-hCCCeEEEEeCCccC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVL-SGFSNIEIVDLDTID 55 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal-~Gv~~i~iiD~D~Ie 55 (726)
...|+|||+|..|+.+|..|++ .|.-+++|+|.+.+-
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~ 58 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLA 58 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 4579999999999999999999 994479999987654
No 269
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=83.30 E-value=0.82 Score=45.10 Aligned_cols=31 Identities=23% Similarity=0.378 Sum_probs=26.2
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEE-Ee
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEI-VD 50 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~i-iD 50 (726)
-.||.|||+|.+|..+++.|+..|. ++++ +|
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~-~V~~v~~ 54 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQI-PAIIANS 54 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTC-CEEEECT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 3689999999999999999999997 3554 44
No 270
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=83.29 E-value=0.96 Score=48.15 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=31.5
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|.|||+|.||..+++.|...|+ ++..+|..
T Consensus 137 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~ 172 (324)
T 3hg7_A 137 GLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRS 172 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred ccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcCC
Confidence 5788999999999999999999998887 57777754
No 271
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=83.19 E-value=1.1 Score=47.77 Aligned_cols=93 Identities=8% Similarity=0.036 Sum_probs=52.3
Q ss_pred cccccccEEEEcc-CcHHHHHHHHHHhhhcCC--cEEEEccCCccce-EEEEeCCCCcceecCCCCCCCCCCCccccCCC
Q psy9783 191 NYFKQFTLVMNAL-DNRAARNHVNRMCLASEV--PLIESGTAGYEGQ-VELIKKGETKCYECDPKPAAKTYPGCTIRNTP 266 (726)
Q Consensus 191 ~~~~~~DlVi~al-Dn~~aR~~in~~c~~~~i--PlI~sg~~G~~G~-v~~i~p~~t~cy~C~~~~~~~~~p~Cti~~~p 266 (726)
+-++++|+|+.|+ .+.+....+=+-.-.+-. -+|.+.|.++.-. +.-..++...|...++-.+..-.|..-|-..+
T Consensus 83 ~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~ 162 (319)
T 3ado_A 83 EAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHP 162 (319)
T ss_dssp HHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECT
T ss_pred hHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCC
Confidence 3478899999985 566665544443333322 2677777765321 00001111234445554444455666666667
Q ss_pred CCcchhhhhHhHHhHHH
Q psy9783 267 SEPIHCIVWAKHLFNYL 283 (726)
Q Consensus 267 ~~~~h~i~~a~~lf~~l 283 (726)
.+....+..+..++..+
T Consensus 163 ~Ts~~~~~~~~~~~~~~ 179 (319)
T 3ado_A 163 ETSPATVDRTHALMRKI 179 (319)
T ss_dssp TCCHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHh
Confidence 77777788877776655
No 272
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=83.18 E-value=0.83 Score=48.24 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=30.3
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|..++|.|||+|.||..+++.|...|. ++..+|.
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 177 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDT 177 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECC
Confidence 4788999999999999999999998884 6777764
No 273
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=83.16 E-value=2.3 Score=42.76 Aligned_cols=34 Identities=18% Similarity=0.338 Sum_probs=27.9
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r 43 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYH 43 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEec
Confidence 5677888888 68999999999999996 4666653
No 274
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=83.13 E-value=0.92 Score=46.33 Aligned_cols=32 Identities=25% Similarity=0.469 Sum_probs=28.3
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCC
Confidence 479999999999999999999995 58888755
No 275
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=83.08 E-value=0.91 Score=48.94 Aligned_cols=35 Identities=23% Similarity=0.341 Sum_probs=31.3
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+...+|+|+|+|++|..+++.+..+|. +++++|..
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~ 204 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVR 204 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 568899999999999999999999998 58888854
No 276
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=82.94 E-value=1.1 Score=47.16 Aligned_cols=33 Identities=30% Similarity=0.568 Sum_probs=28.9
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~ 51 (726)
+.||.|||+|.+|..++-.|+..|. .+|.++|-
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 3689999999999999999999885 57888884
No 277
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=82.80 E-value=0.93 Score=51.80 Aligned_cols=37 Identities=24% Similarity=0.389 Sum_probs=32.9
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCcc
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTI 54 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~I 54 (726)
+....|+|||+|..|+.+|-.|++.|+ +++|+|.+.+
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~-~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGH-DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCC-CEEEEcCCCC
Confidence 456789999999999999999999997 7999998754
No 278
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=82.77 E-value=1.2 Score=44.02 Aligned_cols=35 Identities=31% Similarity=0.487 Sum_probs=29.3
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~ 46 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLD 46 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4677899997 69999999999999996 68887643
No 279
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=82.68 E-value=0.98 Score=50.86 Aligned_cols=35 Identities=26% Similarity=0.469 Sum_probs=31.3
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+..++|+|+|+|.||..+++.|...|. ++.++|.+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~ 306 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEID 306 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467899999999999999999999997 78888865
No 280
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=82.68 E-value=1.2 Score=47.89 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=31.5
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|.|||+|.||..+++.|...|+ ++..+|..
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~-~V~~~d~~ 180 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGA-KVIAYDVA 180 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCC-EEEEECCC
Confidence 4788999999999999999999998886 57777754
No 281
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=82.66 E-value=1.3 Score=44.23 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=30.4
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 45 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRN 45 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46788899998 58999999999999997 58887743
No 282
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=82.64 E-value=0.88 Score=48.76 Aligned_cols=35 Identities=23% Similarity=0.277 Sum_probs=30.6
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|..++|.|||+|.||..+|+.|...|+ ++...|.
T Consensus 168 ~l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr 202 (340)
T 4dgs_A 168 SPKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNR 202 (340)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECS
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 5788999999999999999999998886 5777764
No 283
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=82.61 E-value=1.2 Score=46.65 Aligned_cols=33 Identities=24% Similarity=0.434 Sum_probs=28.6
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
.||.|||+|.+|+.++..|+..|. .+++++|.|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 379999999999999999998764 479999865
No 284
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=82.55 E-value=1.2 Score=44.64 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=29.9
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|||+|..|...|..|++.|.. ++|+|.+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLK-TLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCc-EEEEecc
Confidence 35899999999999999999999975 9999976
No 285
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=82.55 E-value=0.91 Score=48.51 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=30.3
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHH-HhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLV-LSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLa-l~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.||..+++.|. ..|. ++.++|.
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~ 195 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDV 195 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECC
Confidence 478899999999999999999998 7886 6777774
No 286
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=82.54 E-value=0.94 Score=49.84 Aligned_cols=34 Identities=21% Similarity=0.398 Sum_probs=29.2
Q ss_pred CcEEEEcCchHHHHHHHHHHH---hCCCeEEEEeCCcc
Q psy9783 20 SKVLVVGAGGIGCELLKNLVL---SGFSNIEIVDLDTI 54 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal---~Gv~~i~iiD~D~I 54 (726)
.+|+|||+|..|+.+|-.|++ .|+ +++|||.+.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~-~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRI-DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGS-EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCC-EEEEEecCCC
Confidence 579999999999999999999 998 7999998754
No 287
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=82.54 E-value=4.8 Score=40.61 Aligned_cols=32 Identities=38% Similarity=0.539 Sum_probs=25.9
Q ss_pred cEEEEc-CchHHHHHHHHHHHh-CCCeEEEEeCC
Q psy9783 21 KVLVVG-AGGIGCELLKNLVLS-GFSNIEIVDLD 52 (726)
Q Consensus 21 kVlvVG-aGgiGceiaknLal~-Gv~~i~iiD~D 52 (726)
+|||.| .|+||.++++.|+.. |-.++.++|..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 34 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIV 34 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESS
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCC
Confidence 589998 599999999999998 32468887743
No 288
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=82.52 E-value=0.86 Score=50.86 Aligned_cols=36 Identities=25% Similarity=0.419 Sum_probs=28.8
Q ss_pred HHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 15 DLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 15 ~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
..+.+++|.|||+|.+|+.++.+|+..|+ +++++|.
T Consensus 11 ~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r 46 (480)
T 2zyd_A 11 HHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNR 46 (480)
T ss_dssp ----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred cccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeC
Confidence 45778899999999999999999999997 5777764
No 289
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.51 E-value=1.2 Score=48.64 Aligned_cols=33 Identities=27% Similarity=0.429 Sum_probs=29.8
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.+|+|+|+|-+|..+++.|...|+ .+++||.|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d 36 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHD 36 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 4579999999999999999999996 59999977
No 290
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=82.44 E-value=1 Score=47.26 Aligned_cols=36 Identities=33% Similarity=0.389 Sum_probs=31.2
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|..++|.|||+|.||..+++.|...|. ++..+|..
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~dr~ 156 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRT 156 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 4788999999999999999999998886 57777753
No 291
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=82.42 E-value=1.1 Score=46.49 Aligned_cols=34 Identities=24% Similarity=0.193 Sum_probs=30.4
Q ss_pred cEEEEcCchHHHHHHHHHHHhC-----CCeEEEEeCCcc
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSG-----FSNIEIVDLDTI 54 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~G-----v~~i~iiD~D~I 54 (726)
.|+|||+|.+|+.+|-.|++.| -.+++|+|.+.+
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 6999999999999999999998 247999998765
No 292
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=82.41 E-value=0.6 Score=49.35 Aligned_cols=30 Identities=23% Similarity=0.337 Sum_probs=26.4
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+|.|||+|.+|+.++..|+..|. +++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~-~V~~~~r 46 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHM 46 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEE-EEEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 89999999999999999999884 5777764
No 293
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=82.35 E-value=0.92 Score=48.62 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=30.3
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.||..+++.|...|+ ++..+|.
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~ 199 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDP 199 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECT
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECC
Confidence 4788999999999999999999998886 5777763
No 294
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=82.31 E-value=1.1 Score=47.38 Aligned_cols=34 Identities=26% Similarity=0.280 Sum_probs=30.1
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
..+|+|||+|..|+.+|..|++.|+. ++|+|.+.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~-V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHR-VVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC-EEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCc-EEEEeCCC
Confidence 35799999999999999999999975 89998763
No 295
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=82.31 E-value=1.2 Score=49.94 Aligned_cols=35 Identities=26% Similarity=0.346 Sum_probs=31.3
Q ss_pred cCcEEEEcCchHHHHHHHHHHH---hCCCeEEEEeCCcc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVL---SGFSNIEIVDLDTI 54 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal---~Gv~~i~iiD~D~I 54 (726)
..+|+|||+|..|+.+|..|++ .|+ +++|||.+.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTA-DITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSS-EEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCC-cEEEEeCCCC
Confidence 4679999999999999999999 786 7999998764
No 296
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=82.19 E-value=1.2 Score=45.00 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=29.6
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+|+|||+|..|...|..|++.|..+++|+|.+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 69999999999999999999998579999976
No 297
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=82.17 E-value=0.77 Score=49.38 Aligned_cols=39 Identities=23% Similarity=0.262 Sum_probs=33.4
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC-CccC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL-DTID 55 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~-D~Ie 55 (726)
+....|+|||+|..|+.+|..|++.|..+++|+|. +.+-
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~ 60 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPG 60 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCC
Confidence 34568999999999999999999999448999998 6653
No 298
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=82.14 E-value=1 Score=48.39 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=30.2
Q ss_pred HHHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEe
Q psy9783 15 DLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 15 ~kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD 50 (726)
..|.+++|.|||+|.||..+++.|...|. ++..+|
T Consensus 156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d 190 (352)
T 3gg9_A 156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWG 190 (352)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEC
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEC
Confidence 35788999999999999999999998886 566666
No 299
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=82.14 E-value=1.1 Score=52.75 Aligned_cols=36 Identities=31% Similarity=0.698 Sum_probs=32.9
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCcc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTI 54 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~I 54 (726)
...|+|||+|.+|+.+|..|++.|..+++|+|.+.+
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 468999999999999999999999867999998765
No 300
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=82.08 E-value=1.1 Score=44.98 Aligned_cols=29 Identities=21% Similarity=0.257 Sum_probs=25.4
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEe
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD 50 (726)
+|.|||+|.+|+.+++.|+..|+ ++++.|
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~ 30 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSL 30 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECC
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeC
Confidence 79999999999999999999996 566644
No 301
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=82.07 E-value=0.87 Score=46.04 Aligned_cols=37 Identities=27% Similarity=0.335 Sum_probs=31.5
Q ss_pred HHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 15 DLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 15 ~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 43 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC 43 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence 457788899998 78999999999999996 48888864
No 302
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=82.05 E-value=3 Score=45.18 Aligned_cols=35 Identities=6% Similarity=0.185 Sum_probs=28.7
Q ss_pred cccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEcc
Q psy9783 193 FKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGT 228 (726)
Q Consensus 193 ~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~ 228 (726)
+.++|+|+.|+....++.+...+ .+.+..+|+...
T Consensus 62 ~~~~Dvvf~a~~~~~s~~~a~~~-~~~G~~vIDlSa 96 (366)
T 3pwk_A 62 FEGVDIALFSAGSSTSAKYAPYA-VKAGVVVVDNTS 96 (366)
T ss_dssp TTTCSEEEECSCHHHHHHHHHHH-HHTTCEEEECSS
T ss_pred hcCCCEEEECCChHhHHHHHHHH-HHCCCEEEEcCC
Confidence 57899999999999988887765 567888887664
No 303
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=82.03 E-value=1.5 Score=46.50 Aligned_cols=33 Identities=27% Similarity=0.620 Sum_probs=29.7
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.++|+|||+|.+|+|+|..|+..|. ++++++..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~ 175 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRG 175 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 4899999999999999999999996 69998754
No 304
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=82.03 E-value=1.1 Score=49.42 Aligned_cols=36 Identities=17% Similarity=0.395 Sum_probs=31.5
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTID 55 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie 55 (726)
...|+|||+|.+|+.+|..|++.|.. ++|+|.+.+-
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~-V~llE~~~~~ 38 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLS-VLMLEAQDLA 38 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCC-EEEEECCCCC
Confidence 45799999999999999999999975 9999986553
No 305
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=81.98 E-value=1.1 Score=45.35 Aligned_cols=36 Identities=31% Similarity=0.505 Sum_probs=30.1
Q ss_pred HHhcCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~ 61 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARS 61 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 367788999985 8999999999999996 58887753
No 306
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=81.97 E-value=1.4 Score=42.90 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=27.3
Q ss_pred CcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
++|+|.|+ |+||.++++.|+..|. ++.++|.+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~ 34 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRG 34 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 36899985 9999999999999995 68888764
No 307
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=81.95 E-value=1.3 Score=45.01 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=27.8
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~ 51 (726)
..+|.|||+|.+|..+++.|+..|.+ ++.++|.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 39 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNR 39 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcC
Confidence 46899999999999999999999753 5777663
No 308
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=81.92 E-value=1.1 Score=49.01 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=31.6
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+...+|+|+|+|.+|..+++.|..+|. +++++|..
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~ 216 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGA-KTTGYDVR 216 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467899999999999999999999998 69998855
No 309
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=81.90 E-value=0.84 Score=47.78 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=30.7
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHh-CCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLS-GFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~-Gv~~i~iiD~ 51 (726)
....+|.|||+|.+|..++++|... |+.++.++|.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 3567899999999999999999988 8888998763
No 310
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=81.88 E-value=1.3 Score=47.66 Aligned_cols=36 Identities=19% Similarity=0.506 Sum_probs=29.5
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
-+...+|.|||+|.+|..++++|+..|. .++++|.+
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~ 54 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLN 54 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 3556899999999999999999999994 68888754
No 311
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=81.82 E-value=0.93 Score=45.35 Aligned_cols=31 Identities=19% Similarity=0.363 Sum_probs=27.0
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.+|.|||+|.+|..+++.|...| ..+.++|.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v~~~~~ 34 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HELIISGS 34 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeEEEECC
Confidence 58999999999999999999988 46777764
No 312
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=81.76 E-value=1.4 Score=43.86 Aligned_cols=35 Identities=31% Similarity=0.511 Sum_probs=29.6
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.+.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 48 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADI 48 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 46778899998 68999999999999996 6777764
No 313
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=81.75 E-value=1.7 Score=45.58 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=29.5
Q ss_pred cccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCc
Q psy9783 191 NYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGY 231 (726)
Q Consensus 191 ~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~ 231 (726)
+++.++|+||+++. +.+-...-..|.++++|+| .||.|+
T Consensus 84 ~ll~~aDVvIDFT~-p~a~~~~~~~~l~~Gv~vV-iGTTG~ 122 (288)
T 3ijp_A 84 SAFSNTEGILDFSQ-PQASVLYANYAAQKSLIHI-IGTTGF 122 (288)
T ss_dssp HHTTSCSEEEECSC-HHHHHHHHHHHHHHTCEEE-ECCCCC
T ss_pred HHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEE-EECCCC
Confidence 34568999999984 4555556678999999999 566676
No 314
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=81.74 E-value=1.2 Score=48.38 Aligned_cols=35 Identities=29% Similarity=0.388 Sum_probs=30.8
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.||..+++.|...|+ ++.+.|.
T Consensus 113 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~ 147 (380)
T 2o4c_A 113 DLAERTYGVVGAGQVGGRLVEVLRGLGW-KVLVCDP 147 (380)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTC-EEEEECH
T ss_pred ccCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 5789999999999999999999999886 5777764
No 315
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=81.73 E-value=0.85 Score=46.22 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=30.8
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
...+|+|||+|..|...|..|++.|+. ++|+|...
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~-v~vie~~~ 55 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIK-PILYEGMM 55 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC-CEEECCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEecCC
Confidence 456899999999999999999999975 89998753
No 316
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=81.71 E-value=1.8 Score=46.42 Aligned_cols=33 Identities=30% Similarity=0.434 Sum_probs=29.6
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.++|+|||+|.+|+|+|..|+..|. ++++++..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~-~Vtvv~~~ 178 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGT-PASIGIIL 178 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-eEEEEEcC
Confidence 6899999999999999999999995 68888754
No 317
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=81.67 E-value=0.81 Score=48.74 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=28.6
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCC------CeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGF------SNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv------~~i~iiD~D 52 (726)
.||.|||+|.+|+.++..|+..|. .+++++|.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~ 60 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRD 60 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECC
Confidence 479999999999999999999992 468888754
No 318
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=81.56 E-value=3.8 Score=46.93 Aligned_cols=36 Identities=25% Similarity=0.493 Sum_probs=28.5
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHh-CCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLS-GFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~-Gv~~i~iiD~D 52 (726)
.+..++|+|.| .|+||.++++.|+.. |. +++++|..
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~-~V~~~~r~ 349 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIG 349 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSE-EEEEEESC
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCC-EEEEEEcC
Confidence 34667899999 599999999999998 64 68887754
No 319
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=81.45 E-value=1.1 Score=49.77 Aligned_cols=32 Identities=28% Similarity=0.422 Sum_probs=28.4
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.|||+|.+|+.++..|+..|+ .++++|.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 579999999999999999999996 68888754
No 320
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=81.38 E-value=1.4 Score=43.59 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=29.4
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~ 40 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLD 40 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5567899997 68999999999999995 68887753
No 321
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=81.37 E-value=1.4 Score=46.76 Aligned_cols=33 Identities=39% Similarity=0.731 Sum_probs=28.8
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~ 51 (726)
..||.|||+|.+|..++-.|+..|. .+|.++|-
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 3689999999999999999998885 57888884
No 322
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=81.31 E-value=1.3 Score=48.25 Aligned_cols=35 Identities=23% Similarity=0.422 Sum_probs=30.7
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.||..+++.|...|+ ++...|.
T Consensus 116 ~l~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~ 150 (381)
T 3oet_A 116 SLRDRTIGIVGVGNVGSRLQTRLEALGI-RTLLCDP 150 (381)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTC-EEEEECH
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECC
Confidence 4788999999999999999999999987 5777764
No 323
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=81.28 E-value=1.5 Score=43.75 Aligned_cols=36 Identities=31% Similarity=0.541 Sum_probs=30.1
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 41 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADID 41 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46678899998 68999999999999996 57887753
No 324
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=81.26 E-value=1.2 Score=43.76 Aligned_cols=36 Identities=28% Similarity=0.471 Sum_probs=30.3
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~ 47 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRT 47 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecC
Confidence 46778889888 58999999999999996 58887754
No 325
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=81.19 E-value=1.4 Score=43.89 Aligned_cols=35 Identities=34% Similarity=0.619 Sum_probs=29.4
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 45 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLD 45 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4567899997 78999999999999996 68887754
No 326
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=82.05 E-value=0.31 Score=47.98 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=28.9
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+...+|.|||+|.+|..+++.|...|. +++++|.
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~-~V~~~~r 50 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGY-SVVFGSR 50 (201)
Confidence 667799999999999999999999985 4666654
No 327
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=81.07 E-value=1.3 Score=49.28 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=30.2
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+.||.|||+|.+|+.++..|+..|. +++++|.|
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~ 40 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVD 40 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 36799999999999999999999996 58888865
No 328
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.01 E-value=0.61 Score=51.78 Aligned_cols=41 Identities=37% Similarity=0.566 Sum_probs=33.4
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccCccCCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLN 60 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie~sNLn 60 (726)
..||+|+|+|-+|..+++.|...| ..+++||.|.=....+.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~-~~v~vId~d~~~~~~~~ 43 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGEN-NDITIVDKDGDRLRELQ 43 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTT-EEEEEEESCHHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHH
Confidence 458999999999999999999888 46999998854444443
No 329
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=80.95 E-value=1.5 Score=42.93 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=27.9
Q ss_pred cCcEEEEc-CchHHHHHHHHHHHhCCC------eEEEEeC
Q psy9783 19 KSKVLVVG-AGGIGCELLKNLVLSGFS------NIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVG-aGgiGceiaknLal~Gv~------~i~iiD~ 51 (726)
+++|+|.| .||||.++++.|+..|.. ++.++|.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r 41 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR 41 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC
Confidence 45788887 789999999999999985 7888774
No 330
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=80.94 E-value=0.88 Score=46.95 Aligned_cols=34 Identities=15% Similarity=0.270 Sum_probs=29.5
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
..+|.|||+|.+|..++++|+..|. +++++|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4689999999999999999999996 588887543
No 331
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=80.88 E-value=1.2 Score=47.81 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=28.3
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..||.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 3589999999999999999999995 57777643
No 332
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=80.84 E-value=6.5 Score=43.57 Aligned_cols=34 Identities=24% Similarity=0.459 Sum_probs=27.8
Q ss_pred cCcEEEEcCchH-HHHHHHHHHH--hCC--CeEEEEeCC
Q psy9783 19 KSKVLVVGAGGI-GCELLKNLVL--SGF--SNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgi-GceiaknLal--~Gv--~~i~iiD~D 52 (726)
..||.|||+|+. |..++..|+. .++ .+|.++|-|
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~ 45 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIP 45 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcC
Confidence 458999999999 8888888887 565 579998843
No 333
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.84 E-value=1.1 Score=44.97 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=29.5
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+.+++|+|.| .||||.++++.|+..|.. +.++|.+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~ 62 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTARD 62 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEECC
Confidence 35677888888 699999999999999964 7787753
No 334
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=80.79 E-value=1.4 Score=44.53 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=29.4
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|||+|..|...|..|++.|+ +++|+|..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQA-SVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCC-CEEEEEcC
Confidence 3589999999999999999999996 68999864
No 335
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=80.77 E-value=1.5 Score=48.70 Aligned_cols=33 Identities=36% Similarity=0.504 Sum_probs=29.7
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|||+|..|..+|..|++.|+ +++|||..
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~-~V~liEk~ 124 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGA-RVVLVEKR 124 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCC-eEEEEEec
Confidence 4689999999999999999999996 69999864
No 336
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=80.73 E-value=1.6 Score=45.22 Aligned_cols=39 Identities=10% Similarity=0.191 Sum_probs=29.2
Q ss_pred cccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccCCc
Q psy9783 191 NYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGY 231 (726)
Q Consensus 191 ~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~G~ 231 (726)
..+.++|+||+++ ++.+-...-..|.++++|+|..-+ |+
T Consensus 68 ~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vVigTt-G~ 106 (273)
T 1dih_A 68 AVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMVIGTT-GF 106 (273)
T ss_dssp TTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEEECCC-CC
T ss_pred HHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEEEECC-CC
Confidence 3456789999988 566667777899999999765443 54
No 337
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=80.71 E-value=1.4 Score=47.18 Aligned_cols=35 Identities=23% Similarity=0.341 Sum_probs=31.0
Q ss_pred CcEEEEcCchHHHHHHHHHHHh--CCCeEEEEeCCccC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLS--GFSNIEIVDLDTID 55 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~--Gv~~i~iiD~D~Ie 55 (726)
..|+|||+|.+|+.+|..|++. |. +++|+|...+-
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~-~V~vlE~~~~~ 73 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGR-SLLLVEEGGLP 73 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTS-CEEEECSSCSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCC-eEEEEeCCCCC
Confidence 5799999999999999999999 97 59999986543
No 338
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=80.64 E-value=1.4 Score=48.68 Aligned_cols=32 Identities=28% Similarity=0.373 Sum_probs=28.9
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.||.|||+|.+|..++..|+..|. +++++|.|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECC
Confidence 689999999999999999999996 68888855
No 339
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=80.64 E-value=1.1 Score=47.96 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=30.2
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.||..+++.|...|+ ++..+|.
T Consensus 170 ~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr 204 (345)
T 4g2n_A 170 GLTGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNR 204 (345)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECS
T ss_pred ccCCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECC
Confidence 4778999999999999999999997776 5777764
No 340
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=80.57 E-value=1.2 Score=45.54 Aligned_cols=31 Identities=29% Similarity=0.463 Sum_probs=25.9
Q ss_pred CcEEEEcCchHHHHHHHHHHHh-----CCCeEEEEe
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLS-----GFSNIEIVD 50 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~-----Gv~~i~iiD 50 (726)
.+|.|||+|.+|+.++..|+.. |..+++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 3799999999999999999999 722566664
No 341
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=80.53 E-value=1.1 Score=45.47 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=28.9
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEe
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD 50 (726)
+..++|+|||.|-+|+|+|..|++.| .+++|+.
T Consensus 143 ~~~k~vvViGgG~ig~E~A~~l~~~g-~~Vtlv~ 175 (312)
T 4gcm_A 143 FKNKRLFVIGGGDSAVEEGTFLTKFA-DKVTIVH 175 (312)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTC-SEEEEEC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcC-CEEEEEe
Confidence 45689999999999999999999888 4688875
No 342
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=80.51 E-value=1.4 Score=44.66 Aligned_cols=36 Identities=19% Similarity=0.432 Sum_probs=30.3
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~ 60 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRS 60 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46778899998 67999999999999997 68887753
No 343
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=80.49 E-value=1.2 Score=48.58 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=28.0
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~-~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 79999999999999999999996 58888755
No 344
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=80.48 E-value=1.3 Score=48.80 Aligned_cols=35 Identities=23% Similarity=0.380 Sum_probs=31.6
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+...+|+|+|+|.+|..+++.+..+|. +++++|..
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~ 222 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVR 222 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 567899999999999999999999998 78888855
No 345
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=80.46 E-value=1.3 Score=45.03 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=27.3
Q ss_pred cCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 19 KSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+++|||.|+ |+||.++++.|+..| .+++++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCGF 34 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEcc
Confidence 468999996 999999999999999 56888774
No 346
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=80.46 E-value=1.3 Score=49.38 Aligned_cols=35 Identities=20% Similarity=0.411 Sum_probs=31.0
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|..++|+|+|+|.||..+++.|...|. ++.++|.|
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~d 279 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVD 279 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 677899999999999999999999997 68888754
No 347
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=80.43 E-value=1.5 Score=44.66 Aligned_cols=33 Identities=30% Similarity=0.361 Sum_probs=29.5
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|||+|..|...|..|++.|. +++|+|..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 37 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGL-SFRFVDPL 37 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence 4579999999999999999999997 59999964
No 348
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=80.42 E-value=1.3 Score=49.02 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=31.1
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|.|+|+|.||..+++.|..+|. ++.++|.+
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~ 243 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVD 243 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 567899999999999999999999997 58888864
No 349
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=80.42 E-value=1.3 Score=44.05 Aligned_cols=40 Identities=28% Similarity=0.374 Sum_probs=31.4
Q ss_pred HHHHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 13 LEDLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 13 ~q~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
....+.+++|+|.| .||||.++++.|+..|. ++.++|.+.
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~ 53 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNE 53 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 34567888999998 58999999999999996 588887553
No 350
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=80.39 E-value=1.5 Score=43.80 Aligned_cols=35 Identities=26% Similarity=0.423 Sum_probs=29.4
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~ 40 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRN 40 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5667888888 67999999999999997 58888753
No 351
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=80.38 E-value=1.6 Score=44.45 Aligned_cols=36 Identities=19% Similarity=0.369 Sum_probs=30.5
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~ 49 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRD 49 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 46778899998 68999999999999995 68888754
No 352
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=80.29 E-value=1.2 Score=49.42 Aligned_cols=32 Identities=25% Similarity=0.381 Sum_probs=28.1
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
..+|.|||+|.+|+.++.+|+..|+ +++++|.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcC
Confidence 4689999999999999999999997 5777764
No 353
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=80.28 E-value=1.6 Score=45.90 Aligned_cols=33 Identities=39% Similarity=0.578 Sum_probs=28.5
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
.||.|||+|.+|..++-.|+..|. ++|.++|-|
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 34 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 489999999999999999998875 579998854
No 354
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=80.27 E-value=0.61 Score=49.03 Aligned_cols=39 Identities=33% Similarity=0.553 Sum_probs=24.1
Q ss_pred hhhhhhhhchhhhhhccccCcchhhhHHHHHHhhCCCCeE
Q psy9783 137 SIIRFLHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANI 176 (726)
Q Consensus 137 ~~~~~~~l~~q~l~~~~hvg~sk~~~ak~~~~~~np~~~i 176 (726)
..++..|||||+ |...++|++|+.++++.+..+||+++|
T Consensus 69 D~Ve~sNL~Rq~-~~~~diG~~Ka~aa~~~L~~iNP~v~v 107 (292)
T 3h8v_A 69 DKVELANMNRLF-FQPHQAGLSKVQAAEHTLRNINPDVLF 107 (292)
T ss_dssp CBC-------------CCTTSBHHHHHHHHHHHHCTTSEE
T ss_pred CccChhhccccc-CChhhcCchHHHHHHHHHHhhCCCcEE
Confidence 346778999985 899999999999999999999999765
No 355
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=80.27 E-value=2.5 Score=45.31 Aligned_cols=33 Identities=33% Similarity=0.617 Sum_probs=29.9
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.++|+|||+|.+|+|++..|...|. ++++++..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~ 177 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGV-HVSLVETQ 177 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-EEEEEEeC
Confidence 5899999999999999999999996 78998864
No 356
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=80.26 E-value=1.4 Score=43.99 Aligned_cols=36 Identities=19% Similarity=0.376 Sum_probs=29.8
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 47 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRK 47 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46677888887 78999999999999996 68887753
No 357
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=80.25 E-value=1.9 Score=48.87 Aligned_cols=36 Identities=17% Similarity=0.427 Sum_probs=31.6
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTID 55 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie 55 (726)
...|+|||+|.+|+.+|..|+..|. +++|+|.+.+-
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~-~V~LlE~~~~~ 67 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGI-KTGLIEMQDFA 67 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCCC
Confidence 4689999999999999999999997 59999977554
No 358
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=80.22 E-value=1.8 Score=42.72 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=27.6
Q ss_pred hcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~ 36 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRR 36 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 356788888 68999999999999996 57787753
No 359
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=80.22 E-value=1.5 Score=44.14 Aligned_cols=36 Identities=31% Similarity=0.576 Sum_probs=30.1
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~ 63 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLA 63 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56778889998 68999999999999997 57887753
No 360
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=80.20 E-value=1.6 Score=44.25 Aligned_cols=33 Identities=33% Similarity=0.509 Sum_probs=29.9
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|||+|..|...|..|++.|. +++|+|.+
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGF-SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeCC
Confidence 4679999999999999999999997 59999975
No 361
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=80.20 E-value=6.6 Score=43.41 Aligned_cols=36 Identities=3% Similarity=-0.017 Sum_probs=30.8
Q ss_pred cccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEE
Q psy9783 191 NYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIES 226 (726)
Q Consensus 191 ~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~s 226 (726)
.-+.++|+++.++++-+.-..+..+|.+++++-+-+
T Consensus 296 e~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 296 ENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp TTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 346789999999999999999999999999885543
No 362
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=80.07 E-value=1.8 Score=43.39 Aligned_cols=36 Identities=22% Similarity=0.430 Sum_probs=30.3
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 41 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRN 41 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46678899998 68999999999999997 68887753
No 363
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=80.06 E-value=1.4 Score=48.84 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=30.8
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|..++|+|+|+|.||..+++.|...|. ++.++|.|
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~d 252 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEID 252 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 567899999999999999999999998 58888754
No 364
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=80.03 E-value=1.2 Score=47.42 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=29.3
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEe
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD 50 (726)
.|..++|.|||+|.||..+++.|...|. ++..+|
T Consensus 162 ~l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d 195 (335)
T 2g76_A 162 ELNGKTLGILGLGRIGREVATRMQSFGM-KTIGYD 195 (335)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEC
T ss_pred CCCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEEC
Confidence 4788999999999999999999997774 577766
No 365
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=79.99 E-value=0.91 Score=48.27 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=29.8
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.||..+++.|...|. ++..+|.
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~ 176 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEA 176 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECS
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECC
Confidence 3788999999999999999999987776 5777664
No 366
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=79.92 E-value=1.7 Score=44.18 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=29.1
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~ 60 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVN 60 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5667888887 68999999999999997 67787743
No 367
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=79.81 E-value=1.6 Score=46.73 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=27.9
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.|||+|.+|..+++.|...|. ++.++|.+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~ 40 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRS 40 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 589999999999999999999994 57777744
No 368
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=79.80 E-value=1.4 Score=49.42 Aligned_cols=36 Identities=25% Similarity=0.396 Sum_probs=32.1
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|..++|.|||.|.||..+|+.|...|. +++++|.+
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~ 289 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEID 289 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSC
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCC
Confidence 3678999999999999999999999996 68888865
No 369
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=79.79 E-value=1.7 Score=43.29 Aligned_cols=35 Identities=23% Similarity=0.437 Sum_probs=29.0
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 40 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQ 40 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence 4567889998 68999999999999996 67777643
No 370
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=79.76 E-value=1.5 Score=43.55 Aligned_cols=36 Identities=28% Similarity=0.474 Sum_probs=29.8
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 39 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDIN 39 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46778899998 58999999999999996 57777643
No 371
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=79.76 E-value=1.5 Score=47.68 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=29.6
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
...|+|||+|..|+..|..|++.|. +++|+|...
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~-~V~llEk~~ 60 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGR-RVLVIDHAR 60 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 4689999999999999999999997 589988654
No 372
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=79.75 E-value=1.3 Score=45.84 Aligned_cols=34 Identities=21% Similarity=0.226 Sum_probs=29.8
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC-cc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD-TI 54 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D-~I 54 (726)
+..|+|||+|..|+.+|..|+ .|. +++|+|.. .+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~-~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHG-RVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTS-CEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCC-CEEEEECCCCc
Confidence 578999999999999999999 585 69999986 45
No 373
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=79.74 E-value=1.2 Score=49.62 Aligned_cols=32 Identities=3% Similarity=-0.055 Sum_probs=27.0
Q ss_pred cccccccEEEEcc--CcHHHHHHHHHHhhhcCCc
Q psy9783 191 NYFKQFTLVMNAL--DNRAARNHVNRMCLASEVP 222 (726)
Q Consensus 191 ~~~~~~DlVi~al--Dn~~aR~~in~~c~~~~iP 222 (726)
+-++++|+||.++ ...++|..--++.+++|+-
T Consensus 71 eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~ 104 (450)
T 3fef_A 71 KALSAADIVIISILPGSLDDMEVDVHLPERCGIY 104 (450)
T ss_dssp HHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCC
T ss_pred HHhcCCCEEEeccccCCcccchhhhhhhhccCcc
Confidence 3468999999998 7889999888899998873
No 374
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=79.67 E-value=4.6 Score=43.00 Aligned_cols=32 Identities=25% Similarity=0.331 Sum_probs=24.9
Q ss_pred cccEEEEccCcHHHHHHHHHHhhhcCCcEEEE
Q psy9783 195 QFTLVMNALDNRAARNHVNRMCLASEVPLIES 226 (726)
Q Consensus 195 ~~DlVi~alDn~~aR~~in~~c~~~~iPlI~s 226 (726)
..|+|+.|+.+...-...-..|+++++.++.+
T Consensus 66 ~iDvVve~t~~~~~a~~~~~~AL~aGKhVVta 97 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRLVLPALEAGIPLITA 97 (332)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHcCCeEEEC
Confidence 78999999998754444455688999998874
No 375
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=79.60 E-value=1.7 Score=43.90 Aligned_cols=36 Identities=19% Similarity=0.393 Sum_probs=30.6
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 40 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSA 40 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccc
Confidence 4667888887 78999999999999996 688888654
No 376
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=79.59 E-value=1.7 Score=43.43 Aligned_cols=35 Identities=26% Similarity=0.512 Sum_probs=28.8
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 38 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVL 38 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4567899998 58999999999999996 57777643
No 377
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=79.54 E-value=5.6 Score=42.21 Aligned_cols=36 Identities=8% Similarity=0.131 Sum_probs=28.2
Q ss_pred ccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEcc
Q psy9783 192 YFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGT 228 (726)
Q Consensus 192 ~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~ 228 (726)
.|.++|+|+.|+....++.+... +.+.++.+|+...
T Consensus 62 ~~~~vDvVf~a~g~~~s~~~a~~-~~~~G~~vId~s~ 97 (336)
T 2r00_A 62 DWSQVHIALFSAGGELSAKWAPI-AAEAGVVVIDNTS 97 (336)
T ss_dssp CGGGCSEEEECSCHHHHHHHHHH-HHHTTCEEEECSS
T ss_pred HhcCCCEEEECCCchHHHHHHHH-HHHcCCEEEEcCC
Confidence 35789999999999988887765 4567888887553
No 378
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=79.54 E-value=1.2 Score=44.90 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=28.4
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEe
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD 50 (726)
+.++|+|||.|.+|+|+|..|++.|. +++|+.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~-~Vt~v~ 182 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGS-KVIILH 182 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSS-EEEEEC
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCC-eeeeec
Confidence 46899999999999999999999994 688875
No 379
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.53 E-value=1.3 Score=44.49 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=29.5
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 43 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRS 43 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5677888887 78999999999999997 68888754
No 380
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=79.47 E-value=1.6 Score=48.89 Aligned_cols=33 Identities=21% Similarity=0.442 Sum_probs=28.7
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
-.+|.|||+|.+|+.++..|+..|+ .++++|.+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGH-QVLLYDIS 37 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 4589999999999999999999997 58887743
No 381
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=79.45 E-value=1.8 Score=43.77 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=29.6
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.+.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r 58 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASR 58 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 36678899998 68999999999999996 5888774
No 382
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=79.37 E-value=1.3 Score=43.76 Aligned_cols=34 Identities=21% Similarity=0.471 Sum_probs=28.7
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 46 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYR 46 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeC
Confidence 4567899997 78999999999999996 6888774
No 383
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=79.35 E-value=1.6 Score=43.80 Aligned_cols=32 Identities=34% Similarity=0.523 Sum_probs=27.6
Q ss_pred cEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 21 KVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 21 kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+|||.|+ |.||.++++.|+..|..++++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence 5899996 9999999999999996678887753
No 384
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=79.35 E-value=2 Score=42.70 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=28.8
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r 39 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA-AVAIAAR 39 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 5677899997 78999999999999996 5777764
No 385
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=79.34 E-value=2 Score=42.20 Aligned_cols=35 Identities=29% Similarity=0.444 Sum_probs=31.2
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..++++|+|||+-|-+++..|...|..-+-++|.|
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd~ 45 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRACGETVAAIVDAD 45 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 34589999999999999999999998888999966
No 386
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=79.30 E-value=1.5 Score=47.52 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=30.5
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~D 52 (726)
..+|+|||+|..|...|..|++.|.. +++|+|..
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~ 40 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERR 40 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecC
Confidence 46899999999999999999999974 79999864
No 387
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=79.27 E-value=1.7 Score=45.90 Aligned_cols=33 Identities=33% Similarity=0.516 Sum_probs=29.1
Q ss_pred CcEEEEcCchHHHHHHHHHHHh--CCCeEEEEeCCc
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLS--GFSNIEIVDLDT 53 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~--Gv~~i~iiD~D~ 53 (726)
.+|+|||+|..|+.+|..|++. |+ +++|+|...
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~-~V~v~E~~~ 35 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLW-AIDIVEKND 35 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTS-EEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCC-CEEEEECCC
Confidence 3699999999999999999999 86 699998653
No 388
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=79.25 E-value=2 Score=42.57 Aligned_cols=33 Identities=27% Similarity=0.543 Sum_probs=27.9
Q ss_pred cCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 35 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46788887 68999999999999996 68888754
No 389
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=79.23 E-value=1.4 Score=43.16 Aligned_cols=35 Identities=29% Similarity=0.588 Sum_probs=29.1
Q ss_pred hcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 18 KKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 18 ~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
.+++|+|.| .||||.++++.|+..|. ++.++|.+.
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~ 37 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSA 37 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCc
Confidence 456788887 68999999999999995 688888654
No 390
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=79.19 E-value=1.2 Score=43.82 Aligned_cols=34 Identities=21% Similarity=0.481 Sum_probs=28.7
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 43 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDI 43 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcC
Confidence 5678889888 58999999999999995 6778773
No 391
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=79.17 E-value=1.3 Score=45.69 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=29.3
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~ 74 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARS 74 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 5667788887 68999999999999997 68888754
No 392
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=79.15 E-value=1.7 Score=43.15 Aligned_cols=35 Identities=29% Similarity=0.504 Sum_probs=29.5
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~ 42 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRD 42 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence 5678899998 57999999999999996 58888753
No 393
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=79.15 E-value=1.2 Score=43.36 Aligned_cols=35 Identities=31% Similarity=0.402 Sum_probs=29.1
Q ss_pred hcCcEEEEc-CchHHHHHHHHHHHhCC-CeEEEEeCC
Q psy9783 18 KKSKVLVVG-AGGIGCELLKNLVLSGF-SNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVG-aGgiGceiaknLal~Gv-~~i~iiD~D 52 (726)
..++|+|.| .||||.++++.|+..|- .++.++|.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 356788887 78999999999999995 578888864
No 394
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=79.14 E-value=5.7 Score=42.56 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=30.1
Q ss_pred ccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEccC
Q psy9783 192 YFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTA 229 (726)
Q Consensus 192 ~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~~ 229 (726)
.+.++|+|+.|+....++.+...+ .+.+..+|+....
T Consensus 60 ~~~~~Dvvf~a~~~~~s~~~a~~~-~~~G~~vID~Sa~ 96 (344)
T 3tz6_A 60 DPSGLDIALFSAGSAMSKVQAPRF-AAAGVTVIDNSSA 96 (344)
T ss_dssp CCTTCSEEEECSCHHHHHHHHHHH-HHTTCEEEECSST
T ss_pred HhccCCEEEECCChHHHHHHHHHH-HhCCCEEEECCCc
Confidence 357899999999999998887765 5678889987653
No 395
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=79.12 E-value=1.6 Score=47.60 Aligned_cols=32 Identities=25% Similarity=0.496 Sum_probs=29.2
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
++|+|||+|.+|+|+|..|.+.|. +++|++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~ 201 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGA-EVTLIEYM 201 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 799999999999999999999996 79998764
No 396
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=79.11 E-value=1.7 Score=46.26 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=29.1
Q ss_pred CcEEEEcCchHHHHHHHHHHH---hCCCeEEEEeCCc
Q psy9783 20 SKVLVVGAGGIGCELLKNLVL---SGFSNIEIVDLDT 53 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal---~Gv~~i~iiD~D~ 53 (726)
++|+|||+|..|.+.|..|++ .|. +++|||...
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~-~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKA-DVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGS-EEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCC-eEEEEeCCC
Confidence 479999999999999999999 664 799999765
No 397
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=79.10 E-value=3.9 Score=44.48 Aligned_cols=35 Identities=14% Similarity=0.318 Sum_probs=29.2
Q ss_pred ccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEc
Q psy9783 192 YFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESG 227 (726)
Q Consensus 192 ~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg 227 (726)
.+.++|+|+.|+....++.+...+ .+.+..+|+..
T Consensus 90 ~~~~~Dvvf~alp~~~s~~~~~~~-~~~G~~VIDlS 124 (381)
T 3hsk_A 90 NFLECDVVFSGLDADVAGDIEKSF-VEAGLAVVSNA 124 (381)
T ss_dssp TGGGCSEEEECCCHHHHHHHHHHH-HHTTCEEEECC
T ss_pred hcccCCEEEECCChhHHHHHHHHH-HhCCCEEEEcC
Confidence 468899999999999999888765 66788888865
No 398
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=79.04 E-value=1.5 Score=44.59 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=30.2
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHh-CCCeEEEEeCCc
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLS-GFSNIEIVDLDT 53 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~-Gv~~i~iiD~D~ 53 (726)
....|+|||+|.+|+.+|..|++. |+ +++|+|...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~-~V~viEk~~ 73 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSV 73 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCC-eEEEEECCC
Confidence 456899999999999999999996 86 589998653
No 399
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=78.96 E-value=2 Score=43.36 Aligned_cols=36 Identities=28% Similarity=0.521 Sum_probs=30.5
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 44 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA-RVVLADLP 44 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 46778899998 58999999999999996 58888854
No 400
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=78.96 E-value=1.9 Score=42.31 Aligned_cols=34 Identities=26% Similarity=0.486 Sum_probs=28.7
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r 43 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGA-RLILIDR 43 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5667899997 69999999999999995 5777764
No 401
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=78.94 E-value=1.7 Score=48.48 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=29.1
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.|||+|.+|+-+|..|+..|+ .++++|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECc
Confidence 589999999999999999999997 68888855
No 402
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=78.81 E-value=1.8 Score=44.01 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=30.0
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|||+|..|...|..|++.|. +++|+|..
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQL-STLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCC-cEEEEeCC
Confidence 3579999999999999999999997 59999987
No 403
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=78.80 E-value=1.6 Score=48.59 Aligned_cols=32 Identities=31% Similarity=0.516 Sum_probs=27.9
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.|||+|.+|+.++.+|+..|. +++++|.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~-~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGF-KVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 479999999999999999999997 58887743
No 404
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=78.76 E-value=1.2 Score=47.94 Aligned_cols=35 Identities=31% Similarity=0.328 Sum_probs=30.2
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|.|||+|.||..+++.|...|+. +..+|.
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~G~~-V~~~dr 195 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPFGCN-LLYHDR 195 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCE-EEEECS
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHCCCE-EEEeCC
Confidence 37899999999999999999999988875 666663
No 405
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=78.75 E-value=2 Score=43.43 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=29.1
Q ss_pred HHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 15 DLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 15 ~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 49 (266)
T 3p19_A 12 RGSMKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARR 49 (266)
T ss_dssp ---CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 346778889988 68999999999999996 57787754
No 406
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=78.74 E-value=2.1 Score=43.01 Aligned_cols=35 Identities=23% Similarity=0.426 Sum_probs=30.0
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 41 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIH 41 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence 6678899998 78999999999999996 68888765
No 407
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=78.73 E-value=1.8 Score=43.65 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=27.3
Q ss_pred cCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.++|+|.|+ |+||..+++.|+..|. ++.+++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~ 35 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRK 35 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECC
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECC
Confidence 368999996 9999999999999994 57776643
No 408
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=78.68 E-value=1.6 Score=42.90 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=28.1
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r 37 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTAT 37 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 4567888887 68999999999999996 5777764
No 409
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=78.67 E-value=1.9 Score=43.35 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=29.6
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 64 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDIN 64 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcC
Confidence 6678899998 78999999999999996 57787743
No 410
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=78.63 E-value=2 Score=42.73 Aligned_cols=35 Identities=31% Similarity=0.485 Sum_probs=29.2
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 39 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLR 39 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5667899998 68999999999999995 67787743
No 411
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=78.60 E-value=2 Score=43.98 Aligned_cols=36 Identities=36% Similarity=0.515 Sum_probs=30.2
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~ 80 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLD 80 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46778899998 68999999999999996 57777754
No 412
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=78.59 E-value=1.6 Score=42.72 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=29.1
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~ 40 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRK 40 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCC
Confidence 5677888887 69999999999999996 57777753
No 413
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=78.54 E-value=1.5 Score=45.34 Aligned_cols=43 Identities=19% Similarity=0.350 Sum_probs=31.2
Q ss_pred cCHHHHHHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 9 FEKDLEDLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 9 ~g~~~q~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|-..+-+||.++.++|-| .+|||-++++.|+..|. ++.++|.+
T Consensus 19 ~~~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~ 62 (273)
T 4fgs_A 19 YFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRR 62 (273)
T ss_dssp ------CTTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred chhhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 334444578888888887 67999999999999997 58888743
No 414
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=78.53 E-value=1.9 Score=42.99 Aligned_cols=41 Identities=20% Similarity=0.346 Sum_probs=29.3
Q ss_pred HHHHHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 12 DLEDLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 12 ~~q~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
..+....+++|+|.| .||||.++++.|+..|.. +.++|.+.
T Consensus 15 ~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~ 56 (251)
T 3orf_A 15 VPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWN-TISIDFRE 56 (251)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSC
T ss_pred cccccccCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCc
Confidence 334445567899998 689999999999999964 88888654
No 415
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=78.47 E-value=1.9 Score=46.77 Aligned_cols=36 Identities=14% Similarity=0.300 Sum_probs=31.3
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCc
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLDT 53 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~D~ 53 (726)
...+|+|||+|..|...|..|.+.|.+ +++|+|...
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 357899999999999999999999764 899998764
No 416
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=78.46 E-value=1.7 Score=43.03 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=29.5
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 39 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDIN 39 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 5667888888 58999999999999995 68888765
No 417
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=78.44 E-value=1.4 Score=39.77 Aligned_cols=34 Identities=41% Similarity=0.576 Sum_probs=27.9
Q ss_pred cCcEEEEcCchHHHHHHHHHHHh-CCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLS-GFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~-Gv~~i~iiD~D 52 (726)
..+|+|||+|+.|..+++.|... |+.-+-++|.|
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~ 38 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDD 38 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECC
Confidence 46899999999999999999876 65556677755
No 418
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=78.39 E-value=1.6 Score=43.70 Aligned_cols=37 Identities=19% Similarity=0.290 Sum_probs=27.4
Q ss_pred HHHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 14 EDLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 14 q~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+..|.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 6 ~~~~~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r 43 (276)
T 1mxh_A 6 HEASECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYR 43 (276)
T ss_dssp -----CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3456777888887 78999999999999995 6888774
No 419
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=78.36 E-value=1.8 Score=43.90 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=28.4
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEe
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD 50 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~ 62 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWG 62 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEc
Confidence 5677889998 68999999999999997 577776
No 420
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=78.35 E-value=1.5 Score=43.20 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=29.6
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.+.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r 46 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGS 46 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 45778899998 78999999999999995 5778774
No 421
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=78.31 E-value=0.87 Score=46.12 Aligned_cols=42 Identities=21% Similarity=0.245 Sum_probs=30.8
Q ss_pred cCHHHHHHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 9 FEKDLEDLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 9 ~g~~~q~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
+|+.....|.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 17 ~g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r 59 (266)
T 3grp_A 17 QGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGT 59 (266)
T ss_dssp ----CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 344334457778888887 68999999999999996 5777764
No 422
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=78.29 E-value=2.2 Score=42.92 Aligned_cols=36 Identities=31% Similarity=0.389 Sum_probs=30.5
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEccc
Confidence 46778899998 68999999999999996 58888854
No 423
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=78.23 E-value=1.9 Score=47.83 Aligned_cols=35 Identities=31% Similarity=0.481 Sum_probs=30.9
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
....|+|||+|..|+.+|..|++.|+. ++|+|...
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~-v~vlE~~~ 44 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVE-VVVLERLV 44 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCC-EEEEESCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence 456899999999999999999999985 88998653
No 424
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=78.22 E-value=2 Score=46.08 Aligned_cols=36 Identities=28% Similarity=0.441 Sum_probs=32.0
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCc
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLDT 53 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~D~ 53 (726)
...+|+|||+|..|...|..|++.|.. +++|+|.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA 42 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC
Confidence 346899999999999999999999985 899999753
No 425
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=78.16 E-value=2.1 Score=42.69 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=29.1
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~ 42 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRN 42 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5667889988 68999999999999996 57777743
No 426
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=78.12 E-value=1.7 Score=48.32 Aligned_cols=32 Identities=19% Similarity=0.359 Sum_probs=28.1
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+|.|||+|.+|+.++.+|+..|+ +++++|.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~-~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 579999999999999999999997 58887743
No 427
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=78.10 E-value=2.2 Score=42.77 Aligned_cols=35 Identities=26% Similarity=0.440 Sum_probs=29.1
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 40 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDIL 40 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5677899998 78999999999999996 57777643
No 428
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=78.09 E-value=1.8 Score=49.30 Aligned_cols=40 Identities=25% Similarity=0.398 Sum_probs=35.6
Q ss_pred HHHhcCcEEEEcCchHHHHHHHHHHH----hCC------CeEEEEeCCcc
Q psy9783 15 DLIKKSKVLVVGAGGIGCELLKNLVL----SGF------SNIEIVDLDTI 54 (726)
Q Consensus 15 ~kL~~~kVlvVGaGgiGceiaknLal----~Gv------~~i~iiD~D~I 54 (726)
++|.+.||++.|||+.|+.+++.|+. .|+ ++|.++|..-+
T Consensus 278 k~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gl 327 (555)
T 1gq2_A 278 NRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGL 327 (555)
T ss_dssp SCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCe
Confidence 36888999999999999999999998 896 69999997655
No 429
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=78.08 E-value=1.7 Score=48.62 Aligned_cols=42 Identities=17% Similarity=0.119 Sum_probs=34.0
Q ss_pred HHHHHHhcCcEEEEcCchHHHHHHHHHHHh-CCCeEEEEeCCc
Q psy9783 12 DLEDLIKKSKVLVVGAGGIGCELLKNLVLS-GFSNIEIVDLDT 53 (726)
Q Consensus 12 ~~q~kL~~~kVlvVGaGgiGceiaknLal~-Gv~~i~iiD~D~ 53 (726)
-+.++-.-.||.|||+|.+|+-+|.+|+.. |...++++|.|.
T Consensus 11 ~~~~~~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 11 LLKERGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp HHHHHCSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCC
T ss_pred HHhhcCCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 334444456899999999999999999999 875789988663
No 430
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=78.07 E-value=2 Score=46.55 Aligned_cols=35 Identities=37% Similarity=0.538 Sum_probs=31.5
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~D~ 53 (726)
..+|+|||+|..|...|..|++.|.. +++|+|.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT 39 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCC
Confidence 46899999999999999999999985 899999753
No 431
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=78.05 E-value=2.2 Score=43.56 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=28.4
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.+.++.++|.| .||||.++++.|+..|. ++.++|.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV-TVGALGR 60 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 35677888887 68999999999999997 6888774
No 432
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=78.04 E-value=2.1 Score=43.23 Aligned_cols=37 Identities=19% Similarity=0.363 Sum_probs=30.4
Q ss_pred HHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 15 DLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 15 ~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 54 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRN 54 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 456778899997 78999999999999996 57777643
No 433
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=78.01 E-value=1.8 Score=43.52 Aligned_cols=38 Identities=16% Similarity=0.287 Sum_probs=31.4
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCCcc
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLDTI 54 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D~I 54 (726)
.+.+++|+|.| .||||.++++.|+..|. ++.++|.+.-
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~ 63 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIK 63 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCC
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChh
Confidence 46677888887 68999999999999996 6888886543
No 434
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=77.95 E-value=1.2 Score=48.37 Aligned_cols=34 Identities=32% Similarity=0.460 Sum_probs=30.2
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
...|+|||+|..|+.+|..|++.|+ +++|+|...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~-~V~vlE~~~ 39 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGL-KILLVDSKP 39 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSC-CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCC
Confidence 4689999999999999999999997 589998764
No 435
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=77.90 E-value=2.2 Score=42.23 Aligned_cols=35 Identities=29% Similarity=0.454 Sum_probs=29.3
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~ 45 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLP 45 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5677899997 78999999999999996 57777754
No 436
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=77.89 E-value=2.2 Score=43.31 Aligned_cols=35 Identities=26% Similarity=0.547 Sum_probs=29.1
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~ 38 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKS 38 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCC
Confidence 5677888887 78999999999999996 67787643
No 437
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=77.82 E-value=2.2 Score=43.29 Aligned_cols=35 Identities=34% Similarity=0.526 Sum_probs=29.8
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r 50 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASR 50 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46778899997 68999999999999995 5887774
No 438
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=77.81 E-value=7 Score=43.78 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=31.2
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCccC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTID 55 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~Ie 55 (726)
.+|+|+|+|-+|..+++.|...|.. +++||.|.-.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~-v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVP-FILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-EEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCC-EEEEECChHH
Confidence 7899999999999999999999965 8999988543
No 439
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=77.80 E-value=2.3 Score=42.24 Aligned_cols=35 Identities=31% Similarity=0.586 Sum_probs=29.4
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 40 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLV 40 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 5677889997 78999999999999996 58887754
No 440
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=77.76 E-value=1.5 Score=48.62 Aligned_cols=35 Identities=31% Similarity=0.298 Sum_probs=30.6
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCcc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTI 54 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~I 54 (726)
...|+|||+|..|+.+|..|++.|+. ++|+|.+..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~-v~viEr~~~ 39 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVR-VLVVERRPG 39 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCC-EEEECSSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCC-EEEEeCCCC
Confidence 35799999999999999999999984 899987653
No 441
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=77.70 E-value=0.97 Score=46.94 Aligned_cols=38 Identities=24% Similarity=0.428 Sum_probs=31.4
Q ss_pred HHHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 14 EDLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 14 q~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
...|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~ 60 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIG 60 (322)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCc
Confidence 3456777888887 68999999999999996 68888865
No 442
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=77.69 E-value=1.3 Score=47.93 Aligned_cols=34 Identities=32% Similarity=0.394 Sum_probs=28.6
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEe
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD 50 (726)
.|.+++|.|||+|.||..+++.|...|. ++...|
T Consensus 173 ~l~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d 206 (365)
T 4hy3_A 173 LIAGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFD 206 (365)
T ss_dssp CSSSSEEEEECCSHHHHHHHHHHTTSCC-EEEEEC
T ss_pred ccCCCEEEEecCCcccHHHHHhhhhCCC-EEEEEC
Confidence 4778999999999999999999987775 566665
No 443
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=77.67 E-value=1.3 Score=45.68 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=28.7
Q ss_pred CcEEEEcCchHHHHHHHHHHH---hCCCeEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVL---SGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal---~Gv~~i~iiD~D 52 (726)
.+|+|||+|..|+.+|..|++ .|+ +++|+|..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~-~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPL-YLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCE-EEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCc-eEEEEECC
Confidence 369999999999999999999 886 79999865
No 444
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=77.59 E-value=1.7 Score=50.23 Aligned_cols=33 Identities=15% Similarity=0.194 Sum_probs=30.2
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
...|+|||+|..|+.+|..|++.|. +++|+|.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~-~V~vlEk~ 296 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGA-VVTLYCAD 296 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCC-cEEEEeCC
Confidence 3689999999999999999999997 69999985
No 445
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=77.58 E-value=1.7 Score=42.88 Aligned_cols=33 Identities=30% Similarity=0.523 Sum_probs=25.0
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
|.+++|+|.| .||||.++++.|+. | .++.++|.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g-~~v~~~~r 36 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-D-HIVYALGR 36 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-T-SEEEEEES
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-C-CeEEEEeC
Confidence 5677889988 68999999999987 7 46777764
No 446
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=77.55 E-value=4 Score=42.00 Aligned_cols=33 Identities=33% Similarity=0.302 Sum_probs=27.6
Q ss_pred CcEEEEc-CchHHHHHHHHHHHhCC----CeEEEEeCC
Q psy9783 20 SKVLVVG-AGGIGCELLKNLVLSGF----SNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVG-aGgiGceiaknLal~Gv----~~i~iiD~D 52 (726)
++|||.| .|.||.++++.|+..|- .+++++|.+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~ 39 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARR 39 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCC
Confidence 5799998 59999999999999882 468888754
No 447
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=77.52 E-value=1.6 Score=43.73 Aligned_cols=34 Identities=29% Similarity=0.549 Sum_probs=28.7
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
|.+++++|.| .||||.++++.|+..|.. +.++|.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 44 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTDL 44 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCE-EEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 5677888887 689999999999999965 777774
No 448
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=77.51 E-value=1.7 Score=44.06 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=28.6
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.|.++.++|.| .||||.++++.|+..|. ++.++|.
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTAT 60 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46667777777 68999999999999997 6777764
No 449
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=77.45 E-value=1.9 Score=45.59 Aligned_cols=33 Identities=30% Similarity=0.379 Sum_probs=29.5
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|+|+|++|..++..+..+|. ++.++|.+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 7899999999999999999999998 88888743
No 450
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=77.43 E-value=2.8 Score=46.13 Aligned_cols=34 Identities=35% Similarity=0.520 Sum_probs=30.2
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..++|+|||+|.+|+|+|..|+..|. +++|++..
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~-~Vtlv~~~ 226 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGK-EVVLIDVV 226 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC-eEEEEEcc
Confidence 46899999999999999999999995 78998754
No 451
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=77.42 E-value=1.9 Score=43.89 Aligned_cols=39 Identities=21% Similarity=0.331 Sum_probs=31.3
Q ss_pred HHHHHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 12 DLEDLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 12 ~~q~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
...-.|.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 65 (275)
T 4imr_A 26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGV 65 (275)
T ss_dssp HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 334456778888887 68999999999999997 5888775
No 452
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=77.42 E-value=1.8 Score=42.98 Aligned_cols=36 Identities=14% Similarity=0.291 Sum_probs=30.7
Q ss_pred HHHhcCcEEEEcC---chHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 15 DLIKKSKVLVVGA---GGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 15 ~kL~~~kVlvVGa---GgiGceiaknLal~Gv~~i~iiD~ 51 (726)
..+.+++|+|.|+ ||||.++++.|+..|. ++.++|.
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r 48 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYV 48 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEec
Confidence 4567899999995 6999999999999996 6888774
No 453
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=77.39 E-value=2.1 Score=43.11 Aligned_cols=36 Identities=28% Similarity=0.310 Sum_probs=30.6
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.| .||||.++++.|+..|.. +.++|.+
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~ 46 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGAD-IIAVDLC 46 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecc
Confidence 57788899998 689999999999999965 7888754
No 454
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=77.37 E-value=1.7 Score=42.48 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=28.1
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 39 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGT 39 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 4567788887 78999999999999995 5777764
No 455
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=77.36 E-value=2.2 Score=46.41 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=30.1
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|||+|..|...|..|++.|. +++|||.+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGA-QVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4689999999999999999999996 79999965
No 456
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=77.35 E-value=2.1 Score=42.85 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=29.1
Q ss_pred HhcCcEEEEcC---chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGA---GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGa---GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~ 43 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQA 43 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCC
Confidence 45678999997 6999999999999995 57787743
No 457
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=77.34 E-value=2.5 Score=41.40 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=27.5
Q ss_pred cCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~ 35 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLS 35 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46788887 68999999999999995 68887743
No 458
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=77.25 E-value=2 Score=43.34 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=28.4
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 60 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGH-RVIISYRT 60 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 36678889888 68999999999999996 58888754
No 459
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=77.19 E-value=1.9 Score=46.18 Aligned_cols=35 Identities=26% Similarity=0.499 Sum_probs=31.5
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~D~ 53 (726)
..+|+|||+|..|...|..|++.|.. +|+|+|...
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 44 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREP 44 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSS
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCC
Confidence 46899999999999999999999985 799999764
No 460
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=77.18 E-value=2.3 Score=42.56 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=29.0
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCCeEEE-EeCCcc
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEI-VDLDTI 54 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~~i~i-iD~D~I 54 (726)
.+|+|||+|..|...|..|++.|.. ++| +|.+.+
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g~~-v~li~e~~~~ 39 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGGLK-NVVMFEKGMP 39 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCS-CEEEECSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCCCC
Confidence 5899999999999999999999976 555 887543
No 461
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=77.17 E-value=2 Score=43.33 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=26.8
Q ss_pred cCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 19 KSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.++|+|.|+ |.||.++++.|+..| .++.+++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 36 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVR 36 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEEC
Confidence 368999996 999999999999999 45666654
No 462
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=77.11 E-value=2 Score=48.22 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=29.5
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.+.+|.|||+|.+|+.++.+|+..|+ +++++|.+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~dr~ 42 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGF-TVCAYNRT 42 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46799999999999999999999997 57787643
No 463
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=77.10 E-value=1.6 Score=44.58 Aligned_cols=36 Identities=25% Similarity=0.443 Sum_probs=29.4
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~ 62 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADID 62 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 46777888887 68999999999999996 68887743
No 464
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=77.05 E-value=2 Score=43.76 Aligned_cols=36 Identities=22% Similarity=0.457 Sum_probs=29.4
Q ss_pred HHHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 15 DLIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 15 ~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
..|.+++++|.| .||||.++++.|+..|. ++.++|.
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r 57 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGF 57 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 346677889998 68999999999999997 6777764
No 465
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=77.05 E-value=2.1 Score=45.48 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=29.5
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeC-Ccc
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDL-DTI 54 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~-D~I 54 (726)
.|+|||+|..|...|..|++.|. +++|++. |.+
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~-~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGK-KVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTC-CEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCC-eEEEEecCCCc
Confidence 69999999999999999999997 7999986 443
No 466
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=77.03 E-value=1.7 Score=43.16 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=28.8
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~ 47 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARN 47 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4567888887 78999999999999995 67777643
No 467
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=76.94 E-value=2.6 Score=41.14 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=26.5
Q ss_pred CcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 20 SKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
++|+|.| .||||.++++.|+..|.. +.++|.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~ 34 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKA-TYLTGRS 34 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCE-EEEEeCC
Confidence 3688887 689999999999999965 8888754
No 468
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=76.93 E-value=1.9 Score=43.49 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=29.3
Q ss_pred HhcCcEEEEcC---chHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGA---GGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGa---GgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~ 41 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLN 41 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCC
Confidence 45678999997 6999999999999995 58887743
No 469
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=76.92 E-value=1.7 Score=45.65 Aligned_cols=34 Identities=41% Similarity=0.531 Sum_probs=29.6
Q ss_pred CcEEEEcC-chHHHHHHHHHHHhCC-CeEEEEeCCc
Q psy9783 20 SKVLVVGA-GGIGCELLKNLVLSGF-SNIEIVDLDT 53 (726)
Q Consensus 20 ~kVlvVGa-GgiGceiaknLal~Gv-~~i~iiD~D~ 53 (726)
.||+|+|+ |.+|..++..|+..|+ .+|.++|-|.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 37999998 9999999999998885 6799999764
No 470
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=76.88 E-value=1.7 Score=46.81 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=30.1
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
...|+|||+|..|+..|..|++.|. +++|+|...
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~-~V~vlEk~~ 37 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGK 37 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 4689999999999999999999997 699998643
No 471
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=76.86 E-value=2.5 Score=42.78 Aligned_cols=35 Identities=26% Similarity=0.418 Sum_probs=29.2
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 55 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARG 55 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5677888887 78999999999999996 57787743
No 472
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=76.84 E-value=3.3 Score=44.74 Aligned_cols=34 Identities=26% Similarity=0.517 Sum_probs=30.5
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
...+|+|||+|.+|+|+|..|...|. +++|++..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~-~Vtlv~~~ 181 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDIL 181 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecC
Confidence 46899999999999999999999996 78998865
No 473
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=76.83 E-value=2 Score=44.34 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=30.1
Q ss_pred HhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+..++|+|||.|.+|+|++..|+..|. +++++...
T Consensus 164 ~~~~~vvVvG~G~~g~e~a~~l~~~g~-~V~lv~~~ 198 (369)
T 3d1c_A 164 FNKGQYVVIGGNESGFDAAYQLAKNGS-DIALYTST 198 (369)
T ss_dssp SCSSEEEEECCSHHHHHHHHHHHHTTC-EEEEECC-
T ss_pred cCCCEEEEECCCcCHHHHHHHHHhcCC-eEEEEecC
Confidence 456799999999999999999999985 78888754
No 474
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=76.82 E-value=1.6 Score=43.64 Aligned_cols=36 Identities=19% Similarity=0.404 Sum_probs=29.4
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 39 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRT 39 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 35677888887 68999999999999996 57787743
No 475
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=76.82 E-value=1.6 Score=42.76 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=29.1
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++|+|.| .||||.++++.|+..|. ++.++|.+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~ 39 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRH 39 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5677888887 68999999999999996 57787743
No 476
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=76.78 E-value=1.7 Score=47.81 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=31.3
Q ss_pred hcCcEEEEcCchHHHHHHHHHH--------------------HhCCCeEEEEeCC
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLV--------------------LSGFSNIEIVDLD 52 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLa--------------------l~Gv~~i~iiD~D 52 (726)
..++|+|||.|-+|+|+|..|+ .+|+.+++|+...
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~ 198 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRR 198 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcC
Confidence 5689999999999999999999 6899899999754
No 477
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=76.76 E-value=2 Score=42.87 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=28.4
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 38 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRH 38 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4567778887 78999999999999995 57777744
No 478
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=76.76 E-value=2.5 Score=45.36 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=30.8
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCc
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLDT 53 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~D~ 53 (726)
.+|+|||+|..|...|..|.+.|.. +|+|+|...
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 5899999999999999999999985 799999754
No 479
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=76.74 E-value=2.4 Score=42.74 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=29.1
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 54 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRN 54 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5677888888 68999999999999996 57777643
No 480
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=76.68 E-value=2.1 Score=47.20 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=31.5
Q ss_pred HHhcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++|.|||+|.||..+++.|...|. ++...|..
T Consensus 153 el~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~yd~~ 188 (416)
T 3k5p_A 153 EVRGKTLGIVGYGNIGSQVGNLAESLGM-TVRYYDTS 188 (416)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCc
Confidence 4788999999999999999999999986 57788754
No 481
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=76.67 E-value=2 Score=43.75 Aligned_cols=33 Identities=21% Similarity=0.457 Sum_probs=28.4
Q ss_pred HhcCcEEEEcC---chHHHHHHHHHHHhCCCeEEEEe
Q psy9783 17 IKKSKVLVVGA---GGIGCELLKNLVLSGFSNIEIVD 50 (726)
Q Consensus 17 L~~~kVlvVGa---GgiGceiaknLal~Gv~~i~iiD 50 (726)
|.+++++|.|+ ||||.++++.|+..|. ++.++|
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~-~V~~~~ 41 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGT 41 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEee
Confidence 46678999997 7999999999999996 577776
No 482
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=76.66 E-value=2.3 Score=45.69 Aligned_cols=33 Identities=24% Similarity=0.203 Sum_probs=29.2
Q ss_pred CcEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q psy9783 20 SKVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLD 52 (726)
Q Consensus 20 ~kVlvVGaGgiGceiaknLal~Gv~-~i~iiD~D 52 (726)
.+|+|||+|..|.+.|..|++.|-+ +++|||..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~ 36 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 6899999999999999999996544 89999875
No 483
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=76.61 E-value=2.3 Score=41.42 Aligned_cols=33 Identities=18% Similarity=0.429 Sum_probs=26.9
Q ss_pred cCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.++++|.| .||||.++++.|+..|.. +.++|.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYA-LALGARS 35 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 35688887 689999999999999964 7777643
No 484
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=76.57 E-value=1.6 Score=47.33 Aligned_cols=30 Identities=37% Similarity=0.489 Sum_probs=26.9
Q ss_pred cEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 21 kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
+|.|||+|.+|+.++..|+. | .+++++|.+
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G-~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-Q-NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-T-SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-C-CEEEEEECC
Confidence 79999999999999999998 8 578888855
No 485
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=76.57 E-value=2.1 Score=48.58 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=29.8
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCcc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTI 54 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~I 54 (726)
...|+|||+|..|+.+|-.|++.|+ +++|+|....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~-~V~VlEr~~~ 83 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGV-GALVLEKLVE 83 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTC-CEEEEBSCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCCC
Confidence 4579999999999999999999998 5999997643
No 486
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=76.54 E-value=2.6 Score=42.46 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=29.2
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~ 39 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDRE 39 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5677889998 68999999999999996 67777643
No 487
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=76.50 E-value=2.3 Score=43.33 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=27.1
Q ss_pred cCcEEEEcC-chHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 19 KSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGa-GgiGceiaknLal~Gv~~i~iiD~ 51 (726)
.++|+|.|+ |+||..+++.|+..| .++.+++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYAR 36 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEEC
Confidence 367999995 999999999999999 45777764
No 488
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=76.46 E-value=2.5 Score=46.78 Aligned_cols=35 Identities=17% Similarity=0.402 Sum_probs=31.3
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCcc
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTI 54 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~I 54 (726)
+..|+|||+|..|+.+|..|++.|+ +++|+|.+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~-~V~liE~~~~ 41 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGH-RVLLLEREAF 41 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTC-CEEEECSSCS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC-CEEEEccCCC
Confidence 4589999999999999999999997 6999998764
No 489
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=76.45 E-value=2.4 Score=43.11 Aligned_cols=36 Identities=17% Similarity=0.333 Sum_probs=30.0
Q ss_pred HHhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 16 LIKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 16 kL~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~ 65 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARH 65 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 36678899998 68999999999999996 58887753
No 490
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=76.42 E-value=2.3 Score=46.08 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=29.7
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.++|+|||+|.+|+|++..|+..|. +++|++..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~ 202 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGT-KVTILEGA 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEEcC
Confidence 4789999999999999999999996 79999864
No 491
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=76.40 E-value=2.5 Score=45.28 Aligned_cols=38 Identities=11% Similarity=0.277 Sum_probs=28.6
Q ss_pred cccccccEEEEccCcHHHHHHHHHHhhhcCCcEEEEcc
Q psy9783 191 NYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGT 228 (726)
Q Consensus 191 ~~~~~~DlVi~alDn~~aR~~in~~c~~~~iPlI~sg~ 228 (726)
.++.+.|+|+.|+.....+.+....+.+.|+++|.++.
T Consensus 77 ~~~~~vDiV~eatg~~~s~~~a~~~~l~aG~~VI~sap 114 (343)
T 2yyy_A 77 DIIEDADIVVDGAPKKIGKQNLENIYKPHKVKAILQGG 114 (343)
T ss_dssp GTGGGCSEEEECCCTTHHHHHHHHTTTTTTCEEEECTT
T ss_pred HhccCCCEEEECCCccccHHHHHHHHHHCCCEEEECCC
Confidence 34568999999998877666655566778888887654
No 492
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=76.37 E-value=2.2 Score=42.95 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=29.8
Q ss_pred HhcCcEEEEcCc---hHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVGAG---GIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVGaG---giGceiaknLal~Gv~~i~iiD~D 52 (726)
|+++.++|-|++ |||-++++.|+..|. ++.++|.+
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~ 41 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRK 41 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECC
Confidence 678889999974 899999999999996 68888753
No 493
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=76.36 E-value=1.8 Score=44.01 Aligned_cols=32 Identities=9% Similarity=0.125 Sum_probs=28.8
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDL 51 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~ 51 (726)
..+|+|||+|..|..+|..|++.|.. ++|+|.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~-v~lie~ 39 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELK-PLLFEG 39 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC-CEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCe-EEEEec
Confidence 45899999999999999999999974 889986
No 494
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=76.34 E-value=2.8 Score=40.59 Aligned_cols=34 Identities=29% Similarity=0.532 Sum_probs=28.3
Q ss_pred cCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 19 KSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 19 ~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
+++|+|.| .||||.++++.|+..|. ++.++|.+.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~ 36 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRR 36 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCc
Confidence 46789998 68999999999999995 578877553
No 495
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=76.34 E-value=2.5 Score=41.92 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=29.5
Q ss_pred HhcCcEEEEc-CchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 17 IKKSKVLVVG-AGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 17 L~~~kVlvVG-aGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
|.+++++|.| .||||.++++.|+..|. ++.++|.+
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~ 40 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQA 40 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCc
Confidence 4567889998 68999999999999995 68888765
No 496
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=76.33 E-value=2.2 Score=46.53 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=29.8
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
.++|+|||+|.+|+|++..|+..|. +++|++..
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~ 215 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQ 215 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC-EEEEEEeC
Confidence 5799999999999999999999996 79998754
No 497
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=76.31 E-value=2 Score=47.73 Aligned_cols=35 Identities=31% Similarity=0.482 Sum_probs=31.0
Q ss_pred hcCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCc
Q psy9783 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT 53 (726)
Q Consensus 18 ~~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D~ 53 (726)
....|+|||+|..|+.+|-.|++.|+. ++|+|...
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~-v~vlE~~~ 45 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVD-VMVLEQLP 45 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC-EEEEESCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEECCC
Confidence 566899999999999999999999985 88998753
No 498
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=76.31 E-value=1.7 Score=43.05 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=29.7
Q ss_pred HHHhcCcEEEEc-CchHHHHHHHHHHHhCC--CeEEEEeCC
Q psy9783 15 DLIKKSKVLVVG-AGGIGCELLKNLVLSGF--SNIEIVDLD 52 (726)
Q Consensus 15 ~kL~~~kVlvVG-aGgiGceiaknLal~Gv--~~i~iiD~D 52 (726)
..+..++|+|.| .||||.++++.|+..|. .++.++|.+
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecC
Confidence 346677888887 79999999999999995 578888754
No 499
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=76.22 E-value=2.2 Score=44.16 Aligned_cols=33 Identities=12% Similarity=0.193 Sum_probs=29.5
Q ss_pred cCcEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q psy9783 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52 (726)
Q Consensus 19 ~~kVlvVGaGgiGceiaknLal~Gv~~i~iiD~D 52 (726)
..+|+|||+|..|...|..|++.|+ +++|+|..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 46 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNI-SCRIIESM 46 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence 4689999999999999999999997 58999864
No 500
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=76.22 E-value=1.6 Score=43.68 Aligned_cols=32 Identities=31% Similarity=0.516 Sum_probs=24.6
Q ss_pred HHHHhcCcEEEEc-CchHHHHHHHHHHHhCCCe
Q psy9783 14 EDLIKKSKVLVVG-AGGIGCELLKNLVLSGFSN 45 (726)
Q Consensus 14 q~kL~~~kVlvVG-aGgiGceiaknLal~Gv~~ 45 (726)
+..+.+++|+|.| .||||.++++.|+..|..-
T Consensus 21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v 53 (267)
T 4iiu_A 21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNI 53 (267)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 3456778888887 6899999999999999763
Done!