RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9783
(726 letters)
>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId:
9606]}
Length = 426
Score = 152 bits (385), Expect = 1e-40
Identities = 84/283 (29%), Positives = 117/283 (41%), Gaps = 101/283 (35%)
Query: 12 DLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVG 71
L+ L+ KVLV+GAGG+GCELLKNL LSGF I ++D+DTIDVSNLNRQFL
Sbjct: 30 SLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFL------- 82
Query: 72 KSKAQVARNSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANI 131
F + +G+ KA+VA + P+ N+
Sbjct: 83 ---------------------------------FRPKDIGRPKAEVAAEFLNDRVPNCNV 109
Query: 132 VAHHTSIIRFLHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIISADFGVN 191
V H I DF
Sbjct: 110 VPHFNKI-----------------------------------------------QDFNDT 122
Query: 192 YFKQFTLVMNALDNRAARNHVNRMCL------------ASEVPLIESGTAGYEGQVELIK 239
+++QF +++ LD+ AR +N M + +S VPLI+ GT G++G +I
Sbjct: 123 FYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVIL 182
Query: 240 KGETKCYECDPK--PAAKTYPGCTIRNTPSEPIHCIVWAKHLF 280
G T C EC + P +P CTI + P P HCI + + L
Sbjct: 183 PGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQ 225
Score = 114 bits (285), Expect = 1e-27
Identities = 42/213 (19%), Positives = 77/213 (36%), Gaps = 22/213 (10%)
Query: 453 KFDAAVEKDEHLVWDKDDKPAMDFVAACANIRAHVFSIPEKSRFDIKSMAGNIIPAIATS 512
++ E + D DD + ++ + RA ++I + + + IIPA+A++
Sbjct: 225 QWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVAST 284
Query: 513 NAIVAGLVVLHAIHVLQARFSSCQTVYLRKKPNHRDQMIVPEKYLTAPNPTCPVCSPKPQ 572
NA++A + + + + + N D + + CP CS PQ
Sbjct: 285 NAVIAAVCATEVFKIATSAYIPLNNYLVF---NDVDGLYTY-TFEAERKENCPACSQLPQ 340
Query: 573 RTIGLDVTKMTVAEFEEAVLKK-TLNMSA-MVDVMVEASGSVI----ISSEEGETEANND 626
+ E + + +L M + + +E + ++S E T N
Sbjct: 341 NIQ--FSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLS 398
Query: 627 KPL-EHGLIISHRVSARDGPEFEILDQKDLPQP 658
K L E GL DG E + D PQ
Sbjct: 399 KTLKELGL--------VDGQELAVAD-VTTPQT 422
>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding
protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 529
Score = 150 bits (379), Expect = 3e-39
Identities = 43/291 (14%), Positives = 83/291 (28%), Gaps = 98/291 (33%)
Query: 8 VFEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHK 67
++ ++ ++ + V ++ A G E+LKNLVL G + I+D + + + F
Sbjct: 14 LWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQ- 72
Query: 68 QHVGKSKAQVARNSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNP 127
+ +GK++A+ A N
Sbjct: 73 ---------------------------------------RSSIGKNRAEAAMEFLQELNS 93
Query: 128 DANIVAHHTSIIRFLHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTSIISAD 187
D + S L D
Sbjct: 94 DVSGSFVEESPENLL--------------------------------------------D 109
Query: 188 FGVNYFKQFTLVMNALDNRAARNHVNRMCLASEVPLIESGTAGYEGQVELIKKGETKCYE 247
++F +FT+V+ + + + S++PL+ T G G + +I E E
Sbjct: 110 NDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRII-IKEHPVIE 168
Query: 248 CDPKPA------AKTYPG-------CTIRNTPSEPIHCIVWAKHLFNYLER 285
P A K +P + + + W + YL +
Sbjct: 169 SHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQ 219
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein
MoeB {Escherichia coli [TaxId: 562]}
Length = 247
Score = 72.7 bits (177), Expect = 8e-15
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 17 IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQ 76
+K S+VL+VG GG+GC + L +G N+ ++D DT+ +SNL RQ L VG+ K +
Sbjct: 28 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVE 87
Query: 77 VARNSALNFNPDANIYYQVDFHLNRQFLFHKQH 109
AR++ NP I + +
Sbjct: 88 SARDALTRINPHIAITPVNALLDDAELAALIAE 120
>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 209
Score = 38.4 bits (89), Expect = 0.001
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 10 EKDLEDLIK--KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNR 61
+K+L + ++ K+K+ VVG GG G + L + G + V ++T D L R
Sbjct: 4 DKELLEYLQQTKAKITVVGCGGAGNNTITRLKMEGIEGAKTVAINT-DAQQLIR 56
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant
arborvitae (Thuja plicata) [TaxId: 3316]}
Length = 312
Score = 36.3 bits (82), Expect = 0.011
Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 7/111 (6%)
Query: 18 KKSKVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQ 76
KKS+VL+VG G IG ++ + G + N + + + A+
Sbjct: 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFR----PEVVSNIDKVQMLLYFKQLGAK 57
Query: 77 VARNSALNFNPDANIYY--QVDFHLNRQFLFHKQHVGKSKAQVARNSALNF 125
+ S + + V + + + K A A N
Sbjct: 58 LIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNI 108
>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose
epimerase/reductase (GDP-fucose synthetase)
{Escherichia coli [TaxId: 562]}
Length = 315
Score = 35.6 bits (81), Expect = 0.015
Identities = 9/52 (17%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 19 KSKVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQH 69
K +V + G G +G + + L G + + D +++ + F
Sbjct: 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASE 53
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ
{Thermotoga maritima [TaxId: 2336]}
Length = 194
Score = 35.0 bits (80), Expect = 0.018
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKS 73
K+ V+G GG G + ++ G +E V ++T D+ L K +G++
Sbjct: 2 KIKVIGVGGAGNNAINRMIEIGIHGVEFVAVNT-DLQVLEASNADVKIQIGEN 53
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase
{Loblolly pine (Pinus taeda) [TaxId: 3352]}
Length = 307
Score = 34.8 bits (78), Expect = 0.028
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
Query: 19 KSKVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQV 77
+S++L++GA G IG + K + G +V T ++ Q L + G +
Sbjct: 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 62
Query: 78 ARNSALNFNPDANIYYQVDFHLNRQFLFHKQHV 110
+ + + V + + + ++
Sbjct: 63 SIDDHASLVEAVKNVDVVISTVGSLQIESQVNI 95
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 341
Score = 34.6 bits (78), Expect = 0.039
Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 8/149 (5%)
Query: 9 FEKDLEDLIKKSK-VLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFH 66
+E+ ++L + K L+ G G IG LL+ L+ + + + T NL+
Sbjct: 5 YEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV---- 60
Query: 67 KQHVGKSKAQVARNSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFN 126
+ V + + + + + V +S ++A N +
Sbjct: 61 RSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNID 120
Query: 127 PDANI--VAHHTSIIRFLHLNRQFLFHKQ 153
N+ A + F + +
Sbjct: 121 GFLNMLIAARDAKVQSFTYAASSSTYGDH 149
>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptomyces venezuelae [TaxId: 54571]}
Length = 322
Score = 34.4 bits (78), Expect = 0.039
Identities = 16/126 (12%), Positives = 37/126 (29%), Gaps = 6/126 (4%)
Query: 21 KVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVAR 79
++LV G G IG ++ L+ + ++ ++ +D + +
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 80 NSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIV--AHHTS 137
+ A VD ++ H + N ++ A
Sbjct: 62 GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTET---NVQGTQTLLQCAVDAG 118
Query: 138 IIRFLH 143
+ R +H
Sbjct: 119 VGRVVH 124
>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 198
Score = 33.7 bits (77), Expect = 0.045
Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVG 71
+ V+G GG G + ++ + +E + +T D L +G
Sbjct: 3 VIKVIGVGGGGGNAVNHMAKNNVEGVEFICANT-DAQALKNIAARTVLQLG 52
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Escherichia coli [TaxId:
562]}
Length = 338
Score = 33.8 bits (76), Expect = 0.068
Identities = 19/80 (23%), Positives = 28/80 (35%), Gaps = 2/80 (2%)
Query: 21 KVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVAR 79
+VLV G G IG L+ +G I + +L S L +H + + R
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDI-R 60
Query: 80 NSALNFNPDANIYYQVDFHL 99
N AL + H
Sbjct: 61 NEALMTEILHDHAIDTVIHF 80
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 363
Score = 33.8 bits (76), Expect = 0.068
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 17 IKKSKVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHK 67
+ K+ + GAGG I + + L G I ++ FH
Sbjct: 13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHL 64
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase
(acylating) {Pseudomonas sp. [TaxId: 306]}
Length = 157
Score = 32.4 bits (73), Expect = 0.081
Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 8/129 (6%)
Query: 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQV 77
+K KV ++G+G IG +L+ VL +E+ + ID ++
Sbjct: 3 QKLKVAIIGSGNIGTDLM-IKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVE 61
Query: 78 ARNSALNFNPD--ANIYYQVDFHLNRQFLFHKQHVGK-----SKAQVARNSALNFNPDAN 130
F H+ + L + G + A + N + +
Sbjct: 62 GLIKLPEFADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLTPAAIGPYCVPVVNLEEH 121
Query: 131 IVAHHTSII 139
+ + +++
Sbjct: 122 LGKLNVNMV 130
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain
{Archaeon Methanopyrus kandleri [TaxId: 2320]}
Length = 159
Score = 32.4 bits (73), Expect = 0.082
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 10 EKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFH 66
E++L L VLVVGAG +G + K+LV G + + + L R
Sbjct: 16 ERELGSL-HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE 71
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 32.4 bits (73), Expect = 0.092
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52
K+K+++VG+G IG + +V ++ + D+
Sbjct: 3 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 36
>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 347
Score = 33.1 bits (74), Expect = 0.099
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 20 SK-VLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHV 70
SK VLV G G IG + L+ +G+ + +L ++ R + K H+
Sbjct: 1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHI 53
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme
M oxidoreductase/carboxylase {Xanthobacter sp., py2
[TaxId: 35809]}
Length = 121
Score = 31.5 bits (70), Expect = 0.10
Identities = 10/37 (27%), Positives = 13/37 (35%), Gaps = 4/37 (10%)
Query: 6 PGVFE----KDLEDLIKKSKVLVVGAGGIGCELLKNL 38
GVF+ + D S V+VVG E
Sbjct: 5 KGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFF 41
>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 312
Score = 33.1 bits (75), Expect = 0.11
Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Query: 19 KSKVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHK 67
+ ++L+ G G +G L L++ G + + T N+
Sbjct: 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHEN 50
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice
blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 182
Score = 32.3 bits (72), Expect = 0.11
Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 1/89 (1%)
Query: 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARN 80
VL++G+G + L L SG + + L+ A +
Sbjct: 4 SVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALD 62
Query: 81 SALNFNPDANIYYQVDFHLNRQFLFHKQH 109
+ + + FH +Q
Sbjct: 63 AEVAKHDLVISLIPYTFHATVIKSAIRQK 91
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 32.0 bits (71), Expect = 0.16
Identities = 18/146 (12%), Positives = 34/146 (23%), Gaps = 9/146 (6%)
Query: 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVA 78
K+ V+V+GAG + L +G+ I + +R L ++
Sbjct: 3 KAPVVVLGAGLASVSFVAELRQAGY-QGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIR 61
Query: 79 RNSA--------LNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDAN 130
+ L + L+ + + R N
Sbjct: 62 LDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRAVLANDALARA 121
Query: 131 IVAHHTSIIRFLHLNRQFLFHKQHVG 156
I R +G
Sbjct: 122 AGLACDDGIFVDAYGRTTCPDVYALG 147
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 31.2 bits (70), Expect = 0.18
Identities = 17/121 (14%), Positives = 40/121 (33%), Gaps = 13/121 (10%)
Query: 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDT-------IDVSNLNRQFLFHKQHVG 71
+ K+ ++GAG +G L +I ++D+ +D+ + F + G
Sbjct: 1 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG 60
Query: 72 KSKAQVARNSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANI 131
+ NS + + + + ++ A +P+A I
Sbjct: 61 TNNYADTANSDVIVVTS--GAPRKPGMSREDLIKVNADITRACISQ----AAPLSPNAVI 114
Query: 132 V 132
+
Sbjct: 115 I 115
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like
protein HI0607 {Haemophilus influenzae [TaxId: 727]}
Length = 167
Score = 31.4 bits (70), Expect = 0.21
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 9 FEKDLE--DLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50
K +E L K +KV+V G+GG+ ++ SGF ++I
Sbjct: 5 IVKLIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYA 48
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 30.7 bits (69), Expect = 0.23
Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 19 KSKVLVVGAGGIGCELLKNLVLSG-FSNIEIVDLD 52
+SKV ++GAG +G + L + + ++D+
Sbjct: 1 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 35
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 31.1 bits (70), Expect = 0.24
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 14 EDLIKKSKVLVVGAGGIGCELLKNLVLSG-FSNIEIVDLD 52
ED + + K+ VVG G +G +++L G + +VD D
Sbjct: 14 EDKLSRCKITVVGVGDVGMACAISILLKGLADELALVDAD 53
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite
reductase {Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 31.2 bits (69), Expect = 0.26
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 20 SKVLVVGAGGIGCELLKNL 38
SKV++VG G G EL K L
Sbjct: 1 SKVVIVGNGPGGFELAKQL 19
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA
(PrmI) {Escherichia coli [TaxId: 562]}
Length = 342
Score = 31.9 bits (70), Expect = 0.31
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 21 KVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNL--NRQFLFHK 67
+VL++G G IG L + L+ + +D+ + +S + F F +
Sbjct: 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVE 51
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 31.7 bits (70), Expect = 0.32
Identities = 11/36 (30%), Positives = 24/36 (66%)
Query: 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDV 56
+++++GAG +G L LV G++NI ++D +++
Sbjct: 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNM 38
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia
pseudotuberculosis [TaxId: 633]}
Length = 356
Score = 31.4 bits (69), Expect = 0.34
Identities = 11/52 (21%), Positives = 16/52 (30%), Gaps = 2/52 (3%)
Query: 17 IKKSKVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHK 67
+ +V V G G G L L G ++ L V +L
Sbjct: 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVAD 56
>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 346
Score = 31.6 bits (70), Expect = 0.34
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Query: 19 KSKVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQV 77
KVLV G G IG + L+ +G+ + I + + + ++
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61
Query: 78 ARNSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKS 113
+ ++ + + VG+S
Sbjct: 62 FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGES 97
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 154
Score = 30.4 bits (68), Expect = 0.35
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52
++ KV ++G+G IG + L +++ + D+
Sbjct: 6 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 40
>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 198
Score = 30.3 bits (68), Expect = 0.51
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNR 61
+ VVG GG G + ++ G +E + ++T D L
Sbjct: 3 VIKVVGIGGGGVNAVNRMIEQGLKGVEFIAINT-DAQALLM 42
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 339
Score = 30.8 bits (68), Expect = 0.53
Identities = 20/140 (14%), Positives = 39/140 (27%), Gaps = 12/140 (8%)
Query: 19 KSKVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQV 77
+ L+ G G G L + L+ G+ ++ + + +V K+ ++
Sbjct: 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL 60
Query: 78 ARNSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTS 137
+ + L R K + A + + PD T
Sbjct: 61 HYADLTDAS-----------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATG 109
Query: 138 IIRFLHLNRQFLFHKQHVGK 157
+R L R K
Sbjct: 110 ALRLLEAVRSHTIDSGRTVK 129
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
salmonicolor [TaxId: 5005]}
Length = 342
Score = 30.6 bits (67), Expect = 0.61
Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 18 KKSKVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHK 67
+ S VLV GA G + +++ L+ G+ ++NL +++
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKY 59
>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase
{Escherichia coli [TaxId: 562]}
Length = 307
Score = 30.4 bits (66), Expect = 0.78
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 22 VLVVGAGG-IGCELLKNLVLSGFSNIEIVD 50
++V G G IG ++K L G ++I +VD
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVD 31
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 29.6 bits (66), Expect = 0.78
Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 16/136 (11%)
Query: 14 EDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQ---------FL 64
E + +K+ VVG G +G +++ ++ E+ L + L + FL
Sbjct: 15 EATVPNNKITVVGVGQVGMACAISILGKSLAD-ELA-LVDVLEDKLKGEMMDLQHGSLFL 72
Query: 65 FHKQHVGKSKAQVARNSALNFNPDANI--YYQVDFHLNRQFLFHKQHVGKSKAQVARNSA 122
+ V V NS + + +L ++ + + + + + +
Sbjct: 73 QTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCI 132
Query: 123 LNF--NPDANIVAHHT 136
+ NP +I+ + T
Sbjct: 133 IIVVSNP-VDILTYVT 147
>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter
jejuni [TaxId: 197]}
Length = 193
Score = 29.9 bits (66), Expect = 0.84
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50
+ K+ + GA G G G+ +D
Sbjct: 1 RTEKIYIYGASGHGLVCEDVAKNMGYKECIFLD 33
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId:
9823]}
Length = 196
Score = 29.3 bits (64), Expect = 1.1
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVD 50
+K+ ++GAG L G+S+I I +
Sbjct: 3 YSAKIALLGAGPASISCASFLARLGYSDITIFE 35
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi
[TaxId: 90370]}
Length = 338
Score = 29.7 bits (65), Expect = 1.1
Identities = 19/116 (16%), Positives = 32/116 (27%), Gaps = 24/116 (20%)
Query: 21 KVLVVGAGG-IGCELLKNLV-----------------------LSGFSNIEIVDLDTIDV 56
K+L+ G G +G L + LS N E V D +
Sbjct: 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61
Query: 57 SNLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIYYQVDFHLNRQFLFHKQHVGK 112
+++ R + A + NP + V LN + +
Sbjct: 62 NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 177
Score = 29.2 bits (64), Expect = 1.2
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 3/26 (11%)
Query: 9 FEKDLEDL---IKKSKVLVVGAGGIG 31
LE+ +K +++ GAGG
Sbjct: 5 ARMALEEEIGRVKDKNIVIYGAGGAA 30
>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId:
5691]}
Length = 383
Score = 29.8 bits (65), Expect = 1.2
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 21 KVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVAR 79
+VLV G G IG ++ L+ N +V +D++ ++ + +++V + Q
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDG 61
Query: 80 NSALNFNPDANIYY 93
+ A +
Sbjct: 62 PKPPWADRYAALEV 75
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 29.0 bits (63), Expect = 1.3
Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGK 72
V++VG G G E+ L SG I + V + L GK
Sbjct: 5 NVVIVGTGLAGVEVAFGLRASG-WEGNIRLVGDATVIPHHLPPLSKAYLAGK 55
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex
aeolicus [TaxId: 63363]}
Length = 171
Score = 28.8 bits (63), Expect = 1.4
Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 1/117 (0%)
Query: 21 KVLVVGAGGIGCELLKNLVLSGFS-NIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVAR 79
VL+VG G +G K+L SGF I D++ +S + + +K +
Sbjct: 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFS 62
Query: 80 NSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHT 136
+ + + ++ L+ + + L V H
Sbjct: 63 PDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHP 119
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB
{Escherichia coli [TaxId: 562]}
Length = 182
Score = 29.2 bits (64), Expect = 1.4
Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 9 FEKDLEDL---IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNL 59
+ +++ IK ++++GAGG + + G I++ +
Sbjct: 5 HIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKA 58
>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum
vulgare), chloroplast [TaxId: 4558]}
Length = 175
Score = 28.8 bits (64), Expect = 1.4
Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 8 VFEKDLEDLIKKSKVLVVGA-GGIGCELLKNLVLSG-FSNIEIVDLDTIDVSN 58
E + K + V GA G I LL L F + + L +
Sbjct: 13 KAEDKTKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSER 65
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 393
Score = 29.6 bits (64), Expect = 1.5
Identities = 11/74 (14%), Positives = 21/74 (28%), Gaps = 4/74 (5%)
Query: 21 KVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVAR 79
+V+V+G G G +L + E+ +D + + Q S
Sbjct: 3 RVMVIGGDGYCGWATALHLSKKNY---EVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS 59
Query: 80 NSALNFNPDANIYY 93
+Y
Sbjct: 60 RWKALTGKSIELYV 73
>d1ro7a_ c.130.1.1 (A:) Alpha-2,3/8-sialyltransferase CstII
{Campylobacter jejuni [TaxId: 197]}
Length = 258
Score = 29.2 bits (65), Expect = 1.7
Identities = 31/229 (13%), Positives = 65/229 (28%), Gaps = 34/229 (14%)
Query: 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVAR 79
KV++ G G LK + S N D D N+ + K ++GK V
Sbjct: 2 KKVIIAGNGPS----LKEIDYSRLPN----DFDVFRC---NQFYFEDKYYLGKKCKAVFY 50
Query: 80 NSALNFNPDANIYYQVDF------HLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVA 133
N +L F + + + + ++ + + + + +
Sbjct: 51 NPSLFFEQYYTLKHLIQNQEYETELIMCSNYNQAHLENENFVKTFYDYFPDAHLGYDFFK 110
Query: 134 HHTSIIRFLHLNRQFLFHKQHVGKSKAQVARN--------SALNFNPDANIVAHHTS--- 182
+ + + + G VA S ++F + + A T
Sbjct: 111 QLKDFNAYFKFHEIYFNQRITSGVYMCAVAIALGYKEIYLSGIDFYQNGSSYAFDTKQKN 170
Query: 183 --IISADFGVNYFK----QFTLVMNALDNRAARNHVNRMCLASEVPLIE 225
++ +F + + AL+ + CL L
Sbjct: 171 LLKLAPNFKNDNSHYIGHSKNTDIKALEFLEKTYKIKLYCLCPNSLLAN 219
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 29.0 bits (63), Expect = 1.7
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLD 52
KV+VVG G G K + L+ +IE+ ++
Sbjct: 4 KVVVVGGGTGGATAAKYIKLADP-SIEVTLIE 34
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 28.9 bits (63), Expect = 1.9
Identities = 12/93 (12%), Positives = 28/93 (30%), Gaps = 3/93 (3%)
Query: 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVA-- 78
L++G G +++ ++ + R L +
Sbjct: 6 PFLLIGGGTAAFAAARSIRARDP-GARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTL 64
Query: 79 RNSALNFNPDANIYYQVDFHLNRQFLFHKQHVG 111
R N + + F+++ Q L H ++ G
Sbjct: 65 RFKQWNGKERSIYFQPPSFYVSAQDLPHIENGG 97
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 361
Score = 29.0 bits (64), Expect = 1.9
Identities = 9/55 (16%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 21 KVLVVGAGG-IGCELLKNLVLSGFSNIEIVD-------LDTIDVSNLNRQFLFHK 67
K+L+ G G IG ++++++ + + +D L+++ + + ++ F
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEH 56
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 28.0 bits (62), Expect = 2.3
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 20 SKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFL 64
+K+ V+GAG +G L G + EIV L+ I + + L
Sbjct: 2 TKLAVIGAGAVGSTLAFAAAQRGIAR-EIV-LEDIAKERVEAEVL 44
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 28.4 bits (62), Expect = 2.3
Identities = 14/101 (13%), Positives = 27/101 (26%), Gaps = 10/101 (9%)
Query: 18 KKSKVLVVGAGGIGCE--------LLKNLVLSG-FSNIEIVDLDTIDVSNLNRQFLFHKQ 68
+++ +VG+G LK L+ G +N +++ F +
Sbjct: 4 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEG 63
Query: 69 HVGKSKAQVARNSALNFNPDANIYYQVDFHLNRQFLFHKQH 109
+G R + F V F
Sbjct: 64 ILGVELTDKFRKQSERFGTT-IFTETVTKVDFSSKPFKLFT 103
>d2o3ia1 e.73.1.1 (A:2-390) Hypothetical protein CV3147
{Chromobacterium violaceum [TaxId: 536]}
Length = 389
Score = 28.8 bits (64), Expect = 2.3
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Query: 10 EKDLEDLIKKSKVLVVGAGG---IGCELLKNLVLSGFSN---IEIVDLDTID 55
DLE L++ + G GG L N + + +VD+D
Sbjct: 6 PSDLEPLLQGACFFGSGGGGTMISARHLAANFRKGDYYPTDKVRVVDVDEAT 57
>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 172
Score = 28.3 bits (62), Expect = 2.4
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 18 KKSKVLVVGAGGIGCELLKNLV-LSGFSNIEIVDLD 52
K V+VVG G G L++L + + ++
Sbjct: 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFV 41
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 27.7 bits (61), Expect = 2.8
Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 16 LIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQ 68
+ KV++VG G +G + G E + + L +
Sbjct: 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGI--AEEFVIVDVVKDRTKGDALDLED 52
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE
{Escherichia coli [TaxId: 562]}
Length = 167
Score = 28.0 bits (61), Expect = 3.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 21 KVLVVGAGGIGCELLKNLVLSGFS 44
K+ V+G G +G L L G
Sbjct: 2 KITVLGCGALGQLWLTALCKQGHE 25
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 27.9 bits (60), Expect = 3.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 21 KVLVVGAGGIGCELLKNL 38
KV+V+G+ G E ++ L
Sbjct: 2 KVIVLGSSHGGYEAVEEL 19
>d1gtda_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 82
Score = 26.5 bits (59), Expect = 3.3
Identities = 9/41 (21%), Positives = 12/41 (29%), Gaps = 5/41 (12%)
Query: 189 GVNYFKQFTLVMNALDNRAARNHVNRMC---LASEVPLIES 226
+ T M+ A V MC L + V I
Sbjct: 35 DTDTTDVITFTMDEDSLEAVEREVEDMCQRLLCNPV--IHD 73
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE
{Escherichia coli [TaxId: 562]}
Length = 170
Score = 27.6 bits (60), Expect = 3.3
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Query: 9 FEKDLEDL---IKKSKVLVVGAGGIG 31
DLE L ++L++GAGG
Sbjct: 5 LLSDLERLSFIRPGLRILLIGAGGAS 30
>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 232
Score = 28.2 bits (61), Expect = 3.6
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 18 KKSKVLVVGAGG-IGCELLKNLVLSGFSN 45
+ V ++GA G G LLK ++ G +
Sbjct: 13 QNKSVFILGASGETGRVLLKEILEQGLFS 41
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 27.3 bits (60), Expect = 3.7
Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 7/119 (5%)
Query: 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFL--FHKQHVGKSKA 75
++V+V+GAG +G + L+ G ++ EIV L + S + H +
Sbjct: 5 GGARVVVIGAGFVGASYVFALMNQGIAD-EIV-LIDANESKAIGDAMDFNHGKVFAPKPV 62
Query: 76 QVARNSALNFNPDANIYYQ--VDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIV 132
+ + + + L + + + +
Sbjct: 63 DIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVES-VMASGFQGLFL 120
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE
{Haemophilus influenzae [TaxId: 727]}
Length = 171
Score = 27.6 bits (60), Expect = 3.8
Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 4/105 (3%)
Query: 9 FEKDLEDL---IKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLF 65
DL+ L VL++GAGG +L L+ + NI + + L +F
Sbjct: 5 LVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQP 63
Query: 66 HKQHVGKSKAQVARNSALNFNPDANIYYQVDFHLNRQFLFHKQHV 110
+ S + + + +
Sbjct: 64 YGNIQAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEILKLGSA 108
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 27.4 bits (60), Expect = 3.9
Identities = 9/33 (27%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 21 KVLVVGAGGIGCELLKNLVLSG-FSNIEIVDLD 52
K+ +VG G +G L++ G + ++D+D
Sbjct: 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA
{Aspergillus nidulans [TaxId: 162425]}
Length = 350
Score = 28.1 bits (61), Expect = 4.6
Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 18 KKSKVLVVGAGG-IGCELLKNLVLSGF 43
+K + VVGA G G L++ G
Sbjct: 2 QKKTIAVVGATGRQGASLIRVAAAVGH 28
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 205
Score = 27.3 bits (59), Expect = 5.2
Identities = 19/144 (13%), Positives = 37/144 (25%), Gaps = 14/144 (9%)
Query: 18 KKSKVLVVGA-GGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQ 76
K+ + GA G G L V +G+ + ++ D+ + + + A
Sbjct: 2 AVKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQAAD 60
Query: 77 VAR---------NSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNP 127
V + N + + N V VA SA
Sbjct: 61 VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGV---DKVVACTSAFLLWD 117
Query: 128 DANIVAHHTSIIRFLHLNRQFLFH 151
+ ++ + L
Sbjct: 118 PTKVPPRLQAVTDDHIRMHKVLRE 141
>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 321
Score = 27.7 bits (60), Expect = 5.2
Identities = 10/54 (18%), Positives = 17/54 (31%), Gaps = 7/54 (12%)
Query: 21 KVLVVGAGG-IGCELLKNLVLSGFSNIEIVDLDT------IDVSNLNRQFLFHK 67
LV G G G L K L+ G+ +V + + + +
Sbjct: 2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYED 55
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium
falciparum [TaxId: 5833]}
Length = 117
Score = 26.6 bits (58), Expect = 5.8
Identities = 8/38 (21%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 5 IPGVFE----KDLEDLIKKSKVLVVGAGGIGCELLKNL 38
+ G+ + ++ + K+ +VG+G I EL+ +
Sbjct: 4 VKGIENTISSDEFFNIKESKKIGIVGSGYIAVELINVI 41
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme)
{Thermotoga maritima [TaxId: 2336]}
Length = 222
Score = 27.3 bits (60), Expect = 5.9
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 2 ATKIPGVFEKDLEDLIKKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNR 61
A K+ K +E++ KV+V G G G ++K L+ G N+ VD I N
Sbjct: 16 ALKLTE---KKIEEV----KVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPE 68
Query: 62 QFLFHKQH 69
L
Sbjct: 69 TCLNEYHL 76
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 145
Score = 26.6 bits (58), Expect = 6.3
Identities = 12/66 (18%), Positives = 23/66 (34%)
Query: 658 PPAPDAAASTTDAAEEKMETNGNGNGDVGTPDSKKRKVDSSDESLPAKKVRTDEKSTDKV 717
P+P + E+K + G + S V + + P + +K T +
Sbjct: 80 IPSPLRLENIRIQQEQKRKRFHGGKSSGNSSSSLGEMVSGTFRATPTTTAKQKQKVTKHI 139
Query: 718 PEVEEV 723
P + V
Sbjct: 140 PPYDVV 145
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale
cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 27.2 bits (59), Expect = 6.7
Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 3/102 (2%)
Query: 10 EKDLEDLIKKS--KVLVVGAGGIGCELLKNLVLSGFSNIEIVD-LDTIDVSNLNRQFLFH 66
+ + D+I + V+VVGAG G + + + I++ + LF
Sbjct: 22 RRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFS 81
Query: 67 KQHVGKSKAQVARNSALNFNPDANIYYQVDFHLNRQFLFHKQ 108
V K + ++ L + K
Sbjct: 82 AMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKL 123
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 171
Score = 26.7 bits (58), Expect = 6.8
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 21 KVLVVGAGGIG--CELLKNLVLS-GFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQV 77
K+ ++GAG L+ +L + G S + +D ID L+ K++V + A +
Sbjct: 4 KIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMD-IDEERLDAILTIAKKYVEEVGADL 62
>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM
{Escherichia coli [TaxId: 562]}
Length = 164
Score = 26.9 bits (58), Expect = 6.9
Identities = 14/91 (15%), Positives = 28/91 (30%), Gaps = 1/91 (1%)
Query: 19 KSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVA 78
K ++ VVG GGI + VL+ S+ + + + + S + +A
Sbjct: 1 KLRIGVVGLGGIAQKAWLP-VLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLA 59
Query: 79 RNSALNFNPDANIYYQVDFHLNRQFLFHKQH 109
+ F + + H
Sbjct: 60 ASCDAVFVHSSTASHFDVVSTLLNAGVHVCV 90
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia
fasciculata [TaxId: 5656]}
Length = 117
Score = 26.3 bits (57), Expect = 7.1
Identities = 8/23 (34%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Query: 12 DLEDLIKKSKVLVVGAGGIGCEL 34
L++ K+ L VG G I E
Sbjct: 13 YLDEAPKR--ALCVGGGYISIEF 33
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic
enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Length = 308
Score = 27.2 bits (60), Expect = 7.2
Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 17/61 (27%)
Query: 2 ATKIPGVFEKDLEDLIKKSKVLVVGAG--GIGC-ELLKNLVLS-------GFSNIEIVDL 51
T++ K + K L GAG G E++ + + + + I ++D+
Sbjct: 15 CTRVTK---KLVSQE----KYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDI 67
Query: 52 D 52
D
Sbjct: 68 D 68
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 26.6 bits (58), Expect = 7.6
Identities = 7/71 (9%), Positives = 22/71 (30%)
Query: 21 KVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQVARN 80
K+ ++G G +G + L+ G ++ + ++ ++ + N
Sbjct: 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN 62
Query: 81 SALNFNPDANI 91
+
Sbjct: 63 DWAALADADVV 73
>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase
{Frog (Rana perezi) [TaxId: 8403]}
Length = 198
Score = 26.8 bits (58), Expect = 8.0
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 13 LEDLIKKSKVLVVGAGGIG 31
L+ + K ++L G G
Sbjct: 176 LDQINKAFELLSSGQGVRS 194
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240
(T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 252
Score = 27.1 bits (58), Expect = 8.0
Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 2/32 (6%)
Query: 22 VLVVGAGG-IGCELLKNLVLSGFSNIEIVDLD 52
VLV GA G G + K L L
Sbjct: 6 VLVTGASGRTGQIVYKKLKEGSD-KFVAKGLV 36
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 137
Score = 26.3 bits (57), Expect = 8.3
Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 11 KDLEDLIKKSK-VLVVGAGGIGCELLKNL 38
+ LE + ++ K + ++G G +G EL L
Sbjct: 28 RSLEKISREVKSITIIGGGFLGSELACAL 56
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 347
Score = 26.9 bits (58), Expect = 8.8
Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 8/135 (5%)
Query: 19 KSKVLVVGAGG-IGCELLKNLVLSGFSNIEIVDL-DTIDVSNLNRQFLFHKQHVGKSKAQ 76
++ L+ G G G L + L+ G+ IV + + + + + H+ + +
Sbjct: 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHI-EGNMK 59
Query: 77 VARNSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHT 136
+ + I +V + HV S + + D
Sbjct: 60 LHYGDLTDSTCLVKIINEVKPTEIYNL-GAQSHVKISF----DLAEYTADVDGVGTLRLL 114
Query: 137 SIIRFLHLNRQFLFH 151
++ L F+
Sbjct: 115 DAVKTCGLINSVKFY 129
>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex,
C-terminal domain {Thermus aquaticus [TaxId: 271]}
Length = 126
Score = 25.9 bits (57), Expect = 9.0
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 18 KKSKVLVVGAGGIGCELLKNLVLS-GFSNIEIVD 50
+K + +VG G +G L F D
Sbjct: 2 RKWGLCIVGMGRLGSALADYPGFGESFELRGFFD 35
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 26.8 bits (58), Expect = 9.4
Identities = 16/137 (11%), Positives = 37/137 (27%), Gaps = 4/137 (2%)
Query: 18 KKSKVLVVGAGGIGCELLKNLVLSGFSNIEIVDLDTIDVSNLNRQFLFHKQHVGKSKAQV 77
K + +G G G + + G +++ + + +N + K A
Sbjct: 1 KHYDYIAIGGGSGGIASINRAAMYG-QKCALIEAKELGGTCVNVGCVPKKVMW---HAAQ 56
Query: 78 ARNSALNFNPDANIYYQVDFHLNRQFLFHKQHVGKSKAQVARNSALNFNPDANIVAHHTS 137
R + + PD ++ + + N N D
Sbjct: 57 IREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFV 116
Query: 138 IIRFLHLNRQFLFHKQH 154
+ L +N + +
Sbjct: 117 DAKTLEVNGETITADHI 133
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional
dehydrogenase/ferrochelatase Met8p, N-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 150
Score = 26.3 bits (57), Expect = 9.8
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 17 IKKSKVLVVGAGGIGCELLKNLVLSG 42
+K ++L++G G +G L L+ +G
Sbjct: 11 LKDKRILLIGGGEVGLTRLYKLMPTG 36
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.132 0.385
Gapped
Lambda K H
0.267 0.0568 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,603,327
Number of extensions: 120905
Number of successful extensions: 567
Number of sequences better than 10.0: 1
Number of HSP's gapped: 556
Number of HSP's successfully gapped: 100
Length of query: 726
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 634
Effective length of database: 1,144,436
Effective search space: 725572424
Effective search space used: 725572424
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (25.7 bits)