BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy979
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y169|EXT2_DROME Exostosin-2 OS=Drosophila melanogaster GN=Ext2 PE=1 SV=1
Length = 717
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 107/180 (59%), Gaps = 48/180 (26%)
Query: 27 DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRF 86
DRV SLFLL+++LA+VPS+ ILVIWNNQ KSPP +S +P ISK I +T ENKLS RF
Sbjct: 463 DRVESLFLLIQKLAVVPSLQSILVIWNNQKKSPPHLSTFPSISKPLKIRQTKENKLSNRF 522
Query: 87 YPYAEIETEAVLSIDDDITMLTPDELEFGFE----------------------------- 117
YPY EIETEA+L+IDDDI MLT DEL+FG+E
Sbjct: 523 YPYPEIETEAILTIDDDIIMLTTDELDFGYEVWREFPDHIVGFPSRIHVWENVTMRWHYE 582
Query: 118 -------------------YWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
YW++MYT MP I+ +VD HMNCEDIAMNFLVA+IT P
Sbjct: 583 SEWTNQISMVLTGAAFHHKYWSHMYTHAMPGDIKDWVDEHMNCEDIAMNFLVANITNNPP 642
>sp|P70428|EXT2_MOUSE Exostosin-2 OS=Mus musculus GN=Ext2 PE=1 SV=2
Length = 718
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 106/179 (59%), Gaps = 48/179 (26%)
Query: 27 DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRF 86
DRV SLF ++ +++ VPS+SK+LV+WNNQ K+PP S WPKI ++RT ENKLS RF
Sbjct: 464 DRVESLFRVITEVSKVPSLSKLLVVWNNQNKNPPEESLWPKIRVPLKVVRTAENKLSNRF 523
Query: 87 YPYAEIETEAVLSIDDDITMLTPDELEFGFEYW--------------------------- 119
+PY EIETEAVL+IDDDI MLT DEL+FG+E W
Sbjct: 524 FPYDEIETEAVLAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHEMNKWKYE 583
Query: 120 ---------------------NYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKA 157
NY+YT MP I+ +VD+HMNCEDIAMNFLVA++T KA
Sbjct: 584 SEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKNWVDTHMNCEDIAMNFLVANVTGKA 642
>sp|Q93063|EXT2_HUMAN Exostosin-2 OS=Homo sapiens GN=EXT2 PE=1 SV=1
Length = 718
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 106/179 (59%), Gaps = 48/179 (26%)
Query: 27 DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRF 86
DRV SLF ++ +++ VPS+SK+LV+WNNQ K+PP S WPKI ++RT ENKLS RF
Sbjct: 464 DRVESLFRVITEVSKVPSLSKLLVVWNNQNKNPPEDSLWPKIRVPLKVVRTAENKLSNRF 523
Query: 87 YPYAEIETEAVLSIDDDITMLTPDELEFGFEYW--------------------------- 119
+PY EIETEAVL+IDDDI MLT DEL+FG+E W
Sbjct: 524 FPYDEIETEAVLAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHEMNKWKYE 583
Query: 120 ---------------------NYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKA 157
NY+YT MP I+ +VD+HMNCEDIAMNFLVA++T KA
Sbjct: 584 SEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKNWVDAHMNCEDIAMNFLVANVTGKA 642
>sp|O77783|EXT2_BOVIN Exostosin-2 OS=Bos taurus GN=EXT2 PE=1 SV=1
Length = 718
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 106/179 (59%), Gaps = 48/179 (26%)
Query: 27 DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRF 86
DRV SLF ++ +++ VPS+SK+LV+WNNQ K+PP S WPKI ++RT ENKLS RF
Sbjct: 464 DRVESLFRVITEVSKVPSLSKLLVVWNNQNKNPPEDSLWPKIRVPLKVVRTAENKLSNRF 523
Query: 87 YPYAEIETEAVLSIDDDITMLTPDELEFGFEYW--------------------------- 119
+PY EIETEAVL+IDDDI MLT DEL+FG+E W
Sbjct: 524 FPYDEIETEAVLAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHEMNKWKYE 583
Query: 120 ---------------------NYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKA 157
NY+YT MP I+ +VD+HMNCEDIAMNFLVA++T KA
Sbjct: 584 SEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKNWVDAHMNCEDIAMNFLVANVTGKA 642
>sp|Q9WVL6|EXTL3_MOUSE Exostosin-like 3 OS=Mus musculus GN=Extl3 PE=2 SV=2
Length = 918
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 87/180 (48%), Gaps = 50/180 (27%)
Query: 27 DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRF 86
+R L +E+L +P ++K++V+WN+ K P WP I ++RT++N L+ RF
Sbjct: 670 EREEVLMNSLERLNGLPYLNKVVVVWNS-PKLPSEDLLWPDIGVPIMVVRTEKNSLNNRF 728
Query: 87 YPYAEIETEAVLSIDDDITMLTPDELEFGFEYWN-------------------------- 120
P+ EIETEA+LSIDDD L DE+ FGF W
Sbjct: 729 LPWNEIETEAILSIDDD-AHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDIPHQSWLYN 787
Query: 121 ----------------------YMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
Y+Y+ MP IR VD ++NCEDIAMNFLV+HIT K P
Sbjct: 788 SNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLVSHITRKPP 847
>sp|O43909|EXTL3_HUMAN Exostosin-like 3 OS=Homo sapiens GN=EXTL3 PE=2 SV=1
Length = 919
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 87/180 (48%), Gaps = 50/180 (27%)
Query: 27 DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRF 86
+R L +E+L +P ++K++V+WN+ K P WP I ++RT++N L+ RF
Sbjct: 671 EREEVLMNSLERLNGLPYLNKVVVVWNS-PKLPSEDLLWPDIGVPIMVVRTEKNSLNNRF 729
Query: 87 YPYAEIETEAVLSIDDDITMLTPDELEFGFEYWN-------------------------- 120
P+ EIETEA+LSIDDD L DE+ FGF W
Sbjct: 730 LPWNEIETEAILSIDDD-AHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDIPHQSWLYN 788
Query: 121 ----------------------YMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
Y+Y+ MP IR VD ++NCEDIAMNFLV+HIT K P
Sbjct: 789 SNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLVSHITRKPP 848
>sp|O01705|EXT2_CAEEL Exostosin-2 OS=Caenorhabditis elegans GN=rib-2 PE=2 SV=2
Length = 814
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 81/169 (47%), Gaps = 49/169 (28%)
Query: 36 MEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIETE 95
+E+L +P ++KI+V+WNN + PP WP + IR EN L+ RF P+ IETE
Sbjct: 578 LERLHQLPYLNKIIVVWNNVNRDPP--DTWPSLHIPVEFIRVAENNLNNRFVPWDRIETE 635
Query: 96 AVLSIDDDITMLTPDELEFGFEYW------------------------------------ 119
AVLS+DDDI ++ E+ F W
Sbjct: 636 AVLSLDDDIDLMQ-QEIILAFRVWRENRDRIVGFPARHHARYGDSMFYNSNHTCQMSMIL 694
Query: 120 --------NYM--YTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
NY+ YT MP IR +V+S NCEDIAMN+LV+H+T K P
Sbjct: 695 TGAAFIHKNYLTAYTYEMPAEIREHVNSIKNCEDIAMNYLVSHLTRKPP 743
>sp|Q9XZ08|EXT3_DROME Exostosin-3 OS=Drosophila melanogaster GN=botv PE=1 SV=1
Length = 972
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 81/182 (44%), Gaps = 52/182 (28%)
Query: 27 DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRF 86
+R L + +L +P + K++V+WN+ K P +WP I ++R N L+ RF
Sbjct: 722 EREQVLMDSLGRLYGLPYLHKVVVVWNS-PKPPLDDLRWPDIGVPVAVLRAPRNSLNNRF 780
Query: 87 YPYAEIETEAVLSIDDDITMLTPDELEFGFEYW--------------------------- 119
P+ IETEAVLS+DDD L DE+ FGF W
Sbjct: 781 LPFDVIETEAVLSVDDD-AHLRHDEILFGFRVWREHRDRVVGFPGRYHAWDLGNPNGQWH 839
Query: 120 -NYMYTAHM----------------------PTPIRTYVDSHMNCEDIAMNFLVAHITAK 156
N Y+ + P IR VD +MNCEDIAMNFLV+HIT K
Sbjct: 840 YNSNYSCELSMVLTGAAFVHKYYLYLYTYHLPQAIRDKVDEYMNCEDIAMNFLVSHITRK 899
Query: 157 AP 158
P
Sbjct: 900 PP 901
>sp|Q5IGR6|EXT1C_DANRE Exostosin-1c OS=Danio rerio GN=ext1c PE=2 SV=1
Length = 737
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 51/172 (29%)
Query: 35 LMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIET 94
L++ ++ S+I+++WN++ KSPP SKWP + T+ K S RF P+A IET
Sbjct: 492 LLQVVSKSKYCSQIIILWNSE-KSPPQRSKWPPMPVPLTVT-DGRRKTSSRFLPHAAIET 549
Query: 95 EAVLSIDDDITMLTPDELEFGF-------------------------------------- 116
EAVLS+D+D +LT E+ F F
Sbjct: 550 EAVLSLDEDTVLLT-SEINFAFHVWRSFPDRIVGYPPRSHFWDPVKKAWGYTSKWTNEYS 608
Query: 117 ----------EYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
Y++++++ ++P+ +R VD NCEDI MNFLV+ + P
Sbjct: 609 IILTGAAFYHRYYHHLFSHYLPSSLRALVDHSCNCEDILMNFLVSSVAHLPP 660
>sp|Q5IGR8|EXT1A_DANRE Exostosin-1a OS=Danio rerio GN=ext1a PE=2 SV=1
Length = 730
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 50/181 (27%)
Query: 26 IDRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKR 85
+ + +F L+ +A ++I+V+WN K P +WP S +I + +S R
Sbjct: 475 VSQSQPIFKLLVAVAKSQFCAQIMVLWNCD-KPLPSKHRWPATSVPVIVIEGESKVMSSR 533
Query: 86 FYPYAEIETEAVLSIDDDITMLTPDELEFGF----------------------------- 116
F PY I T+AVLS+D+D T+L+ E++F F
Sbjct: 534 FLPYENIITDAVLSLDED-TVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDSNKERWGY 592
Query: 117 -------------------EYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKA 157
Y+NY+YT ++P ++ VD NCEDI MNFLV+ +T
Sbjct: 593 TSKWTNDYSMVLTGAAFYHRYYNYLYTHYLPGSLKGLVDQLSNCEDILMNFLVSAVTKMP 652
Query: 158 P 158
P
Sbjct: 653 P 653
>sp|Q5IGR7|EXT1B_DANRE Exostosin-1b OS=Danio rerio GN=ext1b PE=2 SV=1
Length = 741
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 60/188 (31%)
Query: 29 VHSLFLLMEQ----LALVPSVSK------ILVIWNNQAKSPPPVSKWPKISKSWTIIRTD 78
+H++ L+ Q L L+ SV++ I+V+WN K P +WP + +I +
Sbjct: 479 IHAVTPLVSQSQPILKLIVSVARSQYCAQIIVLWNCD-KPLPAKQRWPATAVPIIVIEGE 537
Query: 79 ENKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGF---------------------- 116
+S RF PY + ++AVLS+D+D T+L+ E++F F
Sbjct: 538 NKVMSSRFQPYESLISDAVLSLDED-TVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDN 596
Query: 117 --------------------------EYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLV 150
Y++++YT +P+ +++ VD NCEDI MNFLV
Sbjct: 597 NKERWGYTSKWTNDYSMVLTGAAIYHRYYHFLYTHFLPSSLKSMVDQLANCEDILMNFLV 656
Query: 151 AHITAKAP 158
+ +T P
Sbjct: 657 SAVTKLPP 664
>sp|Q9JKV7|EXTL1_MOUSE Exostosin-like 1 OS=Mus musculus GN=Extl1 PE=2 SV=2
Length = 669
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 53/176 (30%)
Query: 31 SLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYA 90
SL L++++A ++IL++WN++ K PP +WP+ + T+I+ K+S RF+PY+
Sbjct: 424 SLLKLIQEVAGSRHCAQILILWNSE-KLPP--DRWPETAVPLTVIK-GHRKVSNRFFPYS 479
Query: 91 EIETEAVLSIDDDITMLTPDELEFGF---------------------------------- 116
I T +LS+D T L+ E++F F
Sbjct: 480 NISTNVILSLDAQST-LSTSEVDFAFVVWQSFPERMVGFLSGSHFWDEAQGGWGYRTGMT 538
Query: 117 --------------EYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
Y++ ++T +P +RT D C D+ MNFLVA +T P
Sbjct: 539 NEFSMVLTTAAFYHRYYHTLFTHSLPKALRTIADETPTCVDVLMNFLVATVTKLPP 594
>sp|Q92935|EXTL1_HUMAN Exostosin-like 1 OS=Homo sapiens GN=EXTL1 PE=2 SV=2
Length = 676
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 53/172 (30%)
Query: 35 LMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIET 94
L++ +A ++ILV+W+N+ P S+WP+ + T+I K+S RFYPY+ I T
Sbjct: 435 LIQAVAGSQHCAQILVLWSNERPLP---SRWPETAVPLTVI-DGHRKVSDRFYPYSTIRT 490
Query: 95 EAVLSIDDDITMLTPDELEFGF-------------------------------------- 116
+A+LS+D + L+ E++F F
Sbjct: 491 DAILSLDAR-SSLSTSEVDFAFLVWQSFPERMVGFLTSSHFWDEAHGGWGYTAERTNEFS 549
Query: 117 ----------EYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
Y++ ++T +P +RT D C D+ MNF+VA +T P
Sbjct: 550 MVLTTAAFYHRYYHTLFTHSLPKALRTLADEAPTCVDVLMNFIVAAVTKLPP 601
>sp|Q9V730|EXT1_DROME Exostosin-1 OS=Drosophila melanogaster GN=ttv PE=1 SV=1
Length = 760
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 79/195 (40%), Gaps = 70/195 (35%)
Query: 31 SLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSK-WPKIS----------------KSWT 73
+L+ L+ + V +ILV+W A P P+ K WP S +
Sbjct: 494 ALYKLVRTITKSQFVERILVLW--AADRPLPLKKRWPPTSHIPLHVISLGGSTRSQGAGP 551
Query: 74 IIRTDENK--LSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGF--------------- 116
+T E + +S+RF PY EI+T+AVLS+D+D +L DEL+F +
Sbjct: 552 TSQTTEGRPSISQRFLPYDEIQTDAVLSLDED-AILNTDELDFAYTVWRDFPERIVGYPA 610
Query: 117 ---------------------------------EYWNYMYTAHMPTPIRTYVDSHMNCED 143
Y+NY+YT + + V NCED
Sbjct: 611 RAHFWDDSKNAWGYTSKWTNYYSIVLTGAAFYHRYYNYLYTNWLSLLLLKTVQQSSNCED 670
Query: 144 IAMNFLVAHITAKAP 158
I MN LV+H+T K P
Sbjct: 671 ILMNLLVSHVTRKPP 685
>sp|A5D7I4|EXT1_BOVIN Exostosin-1 OS=Bos taurus GN=EXT1 PE=2 SV=1
Length = 746
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 50/161 (31%)
Query: 46 SKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDIT 105
++I+V+WN K P +WP S +I + +S RF PY I T+AVLS+D+D T
Sbjct: 511 AQIIVLWNCD-KPLPAKHRWPATSVPVIVIEGESKVMSSRFLPYDNIITDAVLSLDED-T 568
Query: 106 MLTPDELEFGFEYWN----------------------YMYTAH----------------- 126
+L+ E++F F W + YT+
Sbjct: 569 VLSTTEVDFAFTVWQSFPERIVGYPARSHFWDNSKERWGYTSKWTNDYSMVLTGAAIYHK 628
Query: 127 ---------MPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
+P ++ VD NCEDI MNFLV+ +T P
Sbjct: 629 YYHYLYTHYLPASLKNMVDQLANCEDILMNFLVSAVTKLPP 669
>sp|Q16394|EXT1_HUMAN Exostosin-1 OS=Homo sapiens GN=EXT1 PE=1 SV=2
Length = 746
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 50/161 (31%)
Query: 46 SKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDIT 105
++I+V+WN K P +WP + +I + +S RF PY I T+AVLS+D+D T
Sbjct: 511 AQIIVLWNCD-KPLPAKHRWPATAVPVVVIEGESKVMSSRFLPYDNIITDAVLSLDED-T 568
Query: 106 MLTPDELEFGFEYWN----------------------YMYTAH----------------- 126
+L+ E++F F W + YT+
Sbjct: 569 VLSTTEVDFAFTVWQSFPERIVGYPARSHFWDNSKERWGYTSKWTNDYSMVLTGAAIYHK 628
Query: 127 ---------MPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
+P ++ VD NCEDI MNFLV+ +T P
Sbjct: 629 YYHYLYSHYLPASLKNMVDQLANCEDILMNFLVSAVTKLPP 669
>sp|P97464|EXT1_MOUSE Exostosin-1 OS=Mus musculus GN=Ext1 PE=1 SV=1
Length = 746
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 50/161 (31%)
Query: 46 SKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDIT 105
++I+V+WN K P +WP + +I + +S RF PY I T+AVLS+D+D T
Sbjct: 511 AQIIVLWNCD-KPLPAKHRWPATAVPVIVIEGESKVMSSRFLPYDNIITDAVLSLDED-T 568
Query: 106 MLTPDELEFGFEYWN----------------------YMYTAH----------------- 126
+L+ E++F F W + YT+
Sbjct: 569 VLSTTEVDFAFTVWQSFPERIVGYPARSHFWDNSKERWGYTSKWTNDYSMVLTGAAIYHK 628
Query: 127 ---------MPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
+P ++ VD NCEDI MNFLV+ +T P
Sbjct: 629 YYHYLYSHYLPASLKNMVDQLANCEDILMNFLVSAVTKLPP 669
>sp|Q9JK82|EXT1_CRIGR Exostosin-1 OS=Cricetulus griseus GN=EXT1 PE=1 SV=1
Length = 746
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 50/161 (31%)
Query: 46 SKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDIT 105
++I+V+WN K P +WP + +I + +S RF PY I T+AVLS+D+D T
Sbjct: 511 AQIIVLWNCD-KPLPAKHRWPATAVPVIVIEGESKVMSSRFLPYDNIITDAVLSLDED-T 568
Query: 106 MLTPDELEFGFEYWN----------------------YMYTAH----------------- 126
+L+ E++F F W + YT+
Sbjct: 569 VLSTTEVDFAFTVWQSFPERIVGYPARSHFWDNSKERWGYTSKWTNDYSMVLTGAAIYHK 628
Query: 127 ---------MPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
+P ++ VD NCEDI MNFLV+ +T P
Sbjct: 629 YYHYLYTHYLPASLKNMVDQLANCEDILMNFLVSAVTKLPP 669
>sp|Q5RBC3|EXT1_PONAB Exostosin-1 OS=Pongo abelii GN=EXT1 PE=2 SV=1
Length = 746
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 50/161 (31%)
Query: 46 SKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDIT 105
++I+V+WN K P +WP + +I + +S RF PY I T+AVLS+D+D T
Sbjct: 511 AQIIVLWNCD-KPLPAKHRWPATAVPVIVIEGESKVMSSRFLPYDNIITDAVLSLDED-T 568
Query: 106 MLTPDELEFGFEYW----------------------NYMYTAH----------------- 126
+L+ E++F F W + YT+
Sbjct: 569 VLSTTEVDFAFTVWRSFPERIVGYPARSHFWDNSKERWGYTSKWTNDYSMVLTGAAIYHK 628
Query: 127 ---------MPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
+P ++ VD NCEDI MNFLV+ +T P
Sbjct: 629 YYHYLYSHYLPASLKNMVDQLANCEDILMNFLVSAVTKLPP 669
>sp|A9X1C8|EXT1_PAPAN Exostosin-1 OS=Papio anubis GN=EXT1 PE=3 SV=1
Length = 746
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 50/161 (31%)
Query: 46 SKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDIT 105
++I+V+WN K P +WP + +I + +S RF PY I T+AVLS+D+D T
Sbjct: 511 AQIIVLWNCD-KPLPAKHRWPATAVPVIVIEGESKVMSSRFLPYDNIITDAVLSLDED-T 568
Query: 106 MLTPDELEFGFEYWN----------------------YMYTAH----------------- 126
+L+ E++F F W + YT+
Sbjct: 569 VLSTTEVDFAFTVWQSFPERIVGYPARSHFWDNSKERWGYTSKWTNDYSMVLTGAAIYHK 628
Query: 127 ---------MPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
+P ++ VD NCEDI MNFLV+ +T P
Sbjct: 629 YYHYLYSHYLPASLKNMVDQLANCEDILMNFLVSAVTKLPP 669
>sp|Q9ES89|EXTL2_MOUSE Exostosin-like 2 OS=Mus musculus GN=Extl2 PE=1 SV=1
Length = 330
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 69/194 (35%), Gaps = 73/194 (37%)
Query: 27 DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPP----------PVSKWPKISKSWTIIR 76
+R L L+ VPS+ K++V+WNN + P P+ P I K T
Sbjct: 75 NRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPI---PVIFKPQT--- 128
Query: 77 TDENKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWN---------------- 120
NK+ R + E+ET AVL +DDD T+++ +L F F W
Sbjct: 129 --ANKMRNRLQVFPEVETNAVLMVDDD-TLISAQDLVFAFSIWQQFPDQIIGFVPRKHVS 185
Query: 121 -----YMYTA---------------------------------HMPTPIRTYVDSHMNCE 142
Y Y P + +D NC+
Sbjct: 186 TSSGIYSYGGFELQTPGPGNGDQYSMVLIGASFFNSKYLELFQKQPAAVHALIDETQNCD 245
Query: 143 DIAMNFLVAHITAK 156
DIAMNFLV T K
Sbjct: 246 DIAMNFLVTRHTGK 259
>sp|Q9UBQ6|EXTL2_HUMAN Exostosin-like 2 OS=Homo sapiens GN=EXTL2 PE=1 SV=1
Length = 330
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 70/198 (35%), Gaps = 73/198 (36%)
Query: 27 DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPP----------PVSKWPKISKSWTIIR 76
+R L L+ VP++ K++V+WNN + P P+ P I K T
Sbjct: 74 NRTDLLLKLLNHYQAVPNLHKVIVVWNNIGEKAPDELWNSLGPHPI---PVIFKQQT--- 127
Query: 77 TDENKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWN---------------- 120
N++ R + E+ET AVL +DDD + TPD L F F W
Sbjct: 128 --ANRMRNRLQVFPELETNAVLMVDDDTLISTPD-LVFAFSVWQQFPDQIVGFVPRKHVS 184
Query: 121 -----YMYTA---------------------------------HMPTPIRTYVDSHMNCE 142
Y Y + P + +D NC+
Sbjct: 185 TSSGIYSYGSFEMQAPGSGNGDQYSMVLIGASFFNSKYLELFQRQPAAVHALIDDTQNCD 244
Query: 143 DIAMNFLVAHITAKAPFI 160
DIAMNF++A K I
Sbjct: 245 DIAMNFIIAKHIGKTSGI 262
>sp|A1SSV6|RUVB_PSYIN Holliday junction ATP-dependent DNA helicase RuvB OS=Psychromonas
ingrahamii (strain 37) GN=ruvB PE=3 SV=1
Length = 334
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 80 NKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWNYMYTAHMPTPIRTYVDSHM 139
N+L +R YA+++ V IDDD+ L D LE E ++YM + + T++ +
Sbjct: 224 NRLLRRVRDYAQVKKANV--IDDDVAKLALDMLEVDNEGFDYMDRKLLMAILDTFMGGPV 281
Query: 140 NCEDIA 145
+++A
Sbjct: 282 GLDNLA 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,322,506
Number of Sequences: 539616
Number of extensions: 2559023
Number of successful extensions: 5171
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5109
Number of HSP's gapped (non-prelim): 47
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)