Query psy9795
Match_columns 337
No_of_seqs 243 out of 1237
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 19:55:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9795.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9795hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wa5_C Importin alpha RE-expor 100.0 1.1E-35 3.7E-40 319.4 28.9 242 37-281 7-248 (960)
2 4fdd_A Transportin-1; heat rep 99.9 1.3E-22 4.3E-27 214.7 19.9 151 33-190 11-162 (852)
3 1ibr_B P95, importin beta-1 su 99.9 2.6E-22 9E-27 195.2 13.8 151 38-189 4-163 (462)
4 3m1i_C Exportin-1; heat repeat 99.8 9.1E-20 3.1E-24 197.5 25.0 221 39-279 20-268 (1049)
5 3a6p_A Exportin-5; exportin-5, 99.8 8.7E-20 3E-24 200.5 23.0 230 32-274 12-259 (1204)
6 2x19_B Importin-13; nuclear tr 99.8 6.1E-20 2.1E-24 196.1 20.6 145 32-187 25-177 (963)
7 2bpt_A Importin beta-1 subunit 99.8 3E-20 1E-24 194.5 14.6 151 39-189 8-168 (861)
8 2x1g_F Cadmus; transport prote 99.8 1.7E-19 5.9E-24 193.2 16.2 193 43-250 15-217 (971)
9 4hat_C Exportin-1; heat repeat 99.8 2.2E-17 7.4E-22 178.6 20.5 222 32-277 17-266 (1023)
10 1qgr_A Protein (importin beta 99.7 3.4E-17 1.2E-21 171.6 19.3 148 39-187 5-161 (876)
11 3gjx_A Exportin-1; transport, 99.7 1.3E-16 4.5E-21 172.6 19.0 143 35-186 28-179 (1073)
12 3ibv_A Exportin-T; karyopherin 99.6 2.5E-14 8.5E-19 154.2 18.8 142 33-187 8-160 (980)
13 1u6g_C TIP120 protein, CAND1; 98.5 6.6E-07 2.3E-11 97.9 13.9 135 40-187 11-165 (1230)
14 4fdd_A Transportin-1; heat rep 96.6 0.059 2E-06 56.4 17.6 150 23-186 37-204 (852)
15 1b3u_A Protein (protein phosph 96.6 0.02 6.8E-07 56.3 13.2 129 46-187 98-234 (588)
16 4db6_A Armadillo repeat protei 96.6 0.028 9.5E-07 47.9 12.2 136 33-186 13-168 (210)
17 1u6g_C TIP120 protein, CAND1; 96.4 0.035 1.2E-06 60.6 14.6 109 70-187 9-117 (1230)
18 2qk2_A LP04448P; mini spindles 96.4 0.23 7.9E-06 43.5 17.5 130 46-187 26-164 (242)
19 1xqr_A HSPBP1 protein; armadil 96.4 0.29 9.8E-06 45.2 18.5 129 46-187 93-240 (296)
20 2vgl_B AP-2 complex subunit be 96.3 0.032 1.1E-06 56.3 12.9 127 45-186 59-190 (591)
21 2bpt_A Importin beta-1 subunit 96.3 0.53 1.8E-05 48.4 22.4 141 41-187 101-255 (861)
22 2qk2_A LP04448P; mini spindles 96.3 0.083 2.8E-06 46.5 13.8 143 30-188 54-208 (242)
23 2qk1_A Protein STU2; STU2P, XM 96.0 0.83 2.9E-05 40.7 20.7 136 45-187 26-177 (249)
24 1b3u_A Protein (protein phosph 95.9 0.062 2.1E-06 52.7 12.3 128 46-187 59-195 (588)
25 1qgr_A Protein (importin beta 95.8 0.045 1.6E-06 56.6 11.2 91 81-187 13-120 (876)
26 3ltj_A Alpharep-4; protein eng 95.7 0.23 7.8E-06 41.9 13.3 46 46-94 25-70 (201)
27 3ltm_A Alpha-REP4; protein eng 95.6 0.23 7.9E-06 42.2 13.1 120 33-183 20-139 (211)
28 3ltm_A Alpha-REP4; protein eng 95.3 0.48 1.7E-05 40.1 14.3 110 46-183 61-170 (211)
29 4hxt_A De novo protein OR329; 95.3 0.25 8.5E-06 42.6 12.5 126 46-186 13-158 (252)
30 3ltj_A Alpharep-4; protein eng 95.2 0.24 8.3E-06 41.7 11.9 110 46-183 56-165 (201)
31 1ibr_B P95, importin beta-1 su 94.9 0.2 6.9E-06 47.4 11.8 95 83-188 342-440 (462)
32 2jdq_A Importin alpha-1 subuni 94.8 0.064 2.2E-06 50.9 7.9 110 69-186 22-137 (450)
33 1oyz_A Hypothetical protein YI 94.8 0.31 1.1E-05 43.4 12.0 123 46-185 34-157 (280)
34 1oyz_A Hypothetical protein YI 94.7 0.31 1.1E-05 43.4 11.9 119 45-183 64-186 (280)
35 4hxt_A De novo protein OR329; 94.5 0.11 3.9E-06 44.8 8.2 129 46-189 97-245 (252)
36 4db6_A Armadillo repeat protei 94.5 0.17 5.8E-06 42.8 9.0 126 46-185 65-209 (210)
37 4db8_A Armadillo-repeat protei 94.3 0.1 3.6E-06 45.5 7.6 126 46-186 65-210 (252)
38 2jdq_A Importin alpha-1 subuni 94.1 1.2 4.1E-05 41.9 15.1 125 48-186 78-222 (450)
39 2vgl_B AP-2 complex subunit be 93.4 0.36 1.2E-05 48.5 10.3 125 46-187 24-152 (591)
40 4db8_A Armadillo-repeat protei 93.3 0.46 1.6E-05 41.2 9.7 127 46-186 23-168 (252)
41 2qk1_A Protein STU2; STU2P, XM 93.1 1.5 5E-05 39.1 13.0 148 30-187 58-222 (249)
42 2z6h_A Catenin beta-1, beta-ca 92.6 1.9 6.4E-05 43.5 14.4 134 35-185 17-169 (644)
43 3tpo_A Importin subunit alpha- 92.5 4.8 0.00016 39.4 17.0 128 45-186 261-407 (529)
44 1wa5_B Importin alpha subunit; 92.4 0.59 2E-05 45.8 10.2 131 46-186 184-329 (530)
45 4b8j_A Importin subunit alpha- 92.3 0.62 2.1E-05 45.5 10.1 131 46-188 297-446 (528)
46 4b8j_A Importin subunit alpha- 92.1 2.5 8.5E-05 41.1 14.3 123 49-186 132-274 (528)
47 1wa5_B Importin alpha subunit; 92.0 0.65 2.2E-05 45.5 9.9 129 46-187 310-459 (530)
48 1jdh_A Beta-catenin; beta-cate 91.9 2.3 7.8E-05 40.9 13.6 134 35-185 20-172 (529)
49 1te4_A Conserved protein MTH18 91.7 0.12 4.1E-06 41.1 3.4 118 33-182 13-130 (131)
50 1w63_A Adapter-related protein 91.1 1 3.4E-05 45.6 10.4 69 117-186 141-209 (618)
51 1xqr_A HSPBP1 protein; armadil 91.0 5 0.00017 36.7 14.2 123 50-186 55-197 (296)
52 2z6g_A B-catenin; FULL-length, 90.9 1.1 3.6E-05 46.8 10.6 132 37-185 155-305 (780)
53 2vgl_A Adaptor protein complex 90.3 1.6 5.5E-05 44.2 11.1 69 117-186 145-217 (621)
54 1w63_A Adapter-related protein 88.9 1.3 4.3E-05 44.9 9.0 122 49-187 291-416 (618)
55 3tpo_A Importin subunit alpha- 88.6 2.4 8.1E-05 41.7 10.6 128 46-187 304-451 (529)
56 1wa5_C Importin alpha RE-expor 88.5 22 0.00076 37.4 18.7 95 82-187 471-584 (960)
57 3ul1_B Importin subunit alpha- 88.3 3.1 0.00011 40.7 11.2 129 46-188 285-433 (510)
58 1jdh_A Beta-catenin; beta-cate 85.5 21 0.00073 33.9 15.4 127 46-186 154-296 (529)
59 3now_A UNC-45 protein, SD10334 85.5 36 0.0012 35.6 17.9 111 66-186 622-738 (810)
60 1xm9_A Plakophilin 1; armadill 84.8 10 0.00036 36.4 12.7 126 47-186 14-173 (457)
61 2vgl_A Adaptor protein complex 84.3 20 0.00069 36.0 15.0 131 41-188 44-180 (621)
62 3ul1_B Importin subunit alpha- 83.8 9.4 0.00032 37.2 12.0 135 45-186 153-304 (510)
63 3l6x_A Catenin delta-1; cateni 82.8 33 0.0011 34.5 15.7 107 69-186 310-433 (584)
64 2z6g_A B-catenin; FULL-length, 82.5 18 0.00062 37.4 14.1 127 47-186 288-429 (780)
65 2z6h_A Catenin beta-1, beta-ca 80.8 28 0.00094 34.7 14.5 126 47-186 152-293 (644)
66 3tjz_B Coatomer subunit gamma; 80.5 12 0.00041 35.2 10.9 129 43-186 76-206 (355)
67 3u0r_A Apoptosis inhibitor 5; 80.4 47 0.0016 32.7 18.5 98 74-186 33-130 (507)
68 2x1g_F Cadmus; transport prote 76.5 77 0.0026 33.1 20.5 55 131-188 519-575 (971)
69 1xm9_A Plakophilin 1; armadill 73.9 12 0.00039 36.1 8.9 110 66-186 282-407 (457)
70 3nmw_A APC variant protein; AR 73.8 30 0.001 32.2 11.6 130 47-186 183-335 (354)
71 1te4_A Conserved protein MTH18 72.8 7.8 0.00027 30.1 6.2 86 35-144 45-130 (131)
72 3nmw_A APC variant protein; AR 72.2 60 0.0021 30.1 13.3 127 46-185 138-292 (354)
73 3nmz_A APC variant protein; pr 71.6 31 0.0011 33.4 11.5 130 47-186 299-451 (458)
74 1uw4_B UPF2, regulator of nons 69.3 37 0.0013 30.3 10.4 148 92-273 24-186 (248)
75 3tt9_A Plakophilin-2; cell adh 67.4 32 0.0011 30.2 9.6 134 36-186 56-230 (233)
76 2of3_A ZYG-9; multifunctional 66.4 73 0.0025 28.6 13.7 166 12-187 25-198 (266)
77 3nmz_A APC variant protein; pr 62.5 91 0.0031 30.1 12.7 127 46-185 254-408 (458)
78 3now_A UNC-45 protein, SD10334 60.0 1.3E+02 0.0046 31.3 14.1 108 65-187 288-410 (810)
79 4f52_E Glomulin; cullin-ring E 59.9 63 0.0021 32.5 11.3 138 44-216 375-516 (596)
80 1vdy_A Hypothetical protein (R 59.7 6.1 0.00021 32.3 3.0 45 142-186 32-79 (140)
81 3l6x_A Catenin delta-1; cateni 56.7 90 0.0031 31.3 11.7 128 46-186 59-222 (584)
82 2of3_A ZYG-9; multifunctional 56.6 91 0.0031 27.9 10.7 90 82-186 145-237 (266)
83 3m1i_C Exportin-1; heat repeat 52.3 1.9E+02 0.0065 30.5 14.2 92 122-220 544-646 (1049)
84 2x19_B Importin-13; nuclear tr 50.4 2.3E+02 0.0079 29.2 23.6 181 47-250 461-652 (963)
85 3ibv_A Exportin-T; karyopherin 49.4 71 0.0024 34.0 10.1 80 130-224 713-795 (980)
86 1vsy_5 Proteasome activator BL 49.1 6.1 0.00021 42.5 1.8 99 85-190 817-929 (997)
87 3opb_A SWI5-dependent HO expre 48.2 2.2E+02 0.0077 29.5 13.3 117 66-185 605-728 (778)
88 4ffb_C Protein STU2; tubulin f 48.0 1.2E+02 0.0042 26.3 10.2 101 45-151 113-216 (278)
89 3tt9_A Plakophilin-2; cell adh 40.0 1.9E+02 0.0063 25.1 10.1 104 66-185 51-180 (233)
90 3o2t_A Symplekin; heat repeat, 38.6 66 0.0023 30.6 7.0 70 121-191 66-136 (386)
91 1vsy_5 Proteasome activator BL 38.4 41 0.0014 36.1 6.1 70 110-181 126-199 (997)
92 3oc3_A Helicase MOT1, MOT1; re 38.2 1.1E+02 0.0037 31.2 8.6 136 32-185 222-365 (800)
93 3clj_A Protein NRD1; CTD-inter 38.0 1.7E+02 0.0058 24.1 9.2 39 154-192 39-77 (157)
94 3u0r_A Apoptosis inhibitor 5; 37.6 3.1E+02 0.01 27.0 19.4 160 36-209 104-271 (507)
95 2qsb_A UPF0147 protein TA0600; 35.9 1.2E+02 0.004 22.6 6.5 44 43-86 24-75 (89)
96 4hat_C Exportin-1; heat repeat 35.8 4.3E+02 0.015 28.1 16.2 96 119-221 541-647 (1023)
97 4ady_A RPN2, 26S proteasome re 33.0 4E+02 0.014 28.4 12.5 120 46-185 553-676 (963)
98 1sz9_A PCF11 protein; RNA poly 31.4 2E+02 0.0068 23.0 9.1 58 152-221 39-96 (144)
99 2iw3_A Elongation factor 3A; a 30.6 5.2E+02 0.018 27.5 15.8 66 121-186 98-164 (986)
100 2qzg_A Conserved uncharacteriz 30.3 1.2E+02 0.0039 22.9 5.7 44 43-86 28-79 (94)
101 3d9j_A RNA-binding protein 16; 28.3 47 0.0016 26.8 3.6 50 140-190 27-76 (145)
102 3grl_A General vesicular trans 28.2 3.9E+02 0.013 27.1 11.0 39 60-100 115-153 (651)
103 2iw3_A Elongation factor 3A; a 26.4 6.1E+02 0.021 27.0 12.9 95 82-188 108-207 (986)
104 3oc3_A Helicase MOT1, MOT1; re 25.8 2.7E+02 0.0094 28.4 9.1 108 68-183 175-290 (800)
105 1n6j_G Calcineurin-binding pro 25.1 59 0.002 19.3 2.6 18 109-126 7-24 (35)
106 4ady_A RPN2, 26S proteasome re 23.4 6.9E+02 0.024 26.6 13.0 117 48-184 521-640 (963)
107 3dwl_F Actin-related protein 2 22.9 37 0.0013 28.2 1.9 43 19-62 119-168 (168)
108 1xgw_A Epsin 4; ENTH, enthopro 22.2 2E+02 0.0067 24.1 6.4 46 141-186 54-103 (176)
109 1eyh_A Epsin; superhelix of he 21.6 1.2E+02 0.0042 24.5 4.9 45 142-186 26-73 (144)
110 3tjz_B Coatomer subunit gamma; 21.3 3.8E+02 0.013 24.8 8.9 91 81-187 80-170 (355)
No 1
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=100.00 E-value=1.1e-35 Score=319.37 Aligned_cols=242 Identities=34% Similarity=0.631 Sum_probs=214.0
Q ss_pred HHhhcccCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHH
Q psy9795 37 TQGVPNHDKNIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDR 116 (337)
Q Consensus 37 l~~tL~~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K 116 (337)
+.++|.++.|||+++| ||++|++++++|||+.+|++++.+.+.+.++|++|+++|||.|+++|...++ ...+++++|
T Consensus 7 l~~~L~~~~spd~~~r--Ae~~L~~~~~~p~~~~~L~~il~~~~~~~~vR~~A~i~lkn~i~~~w~~~~~-~~~l~~~~k 83 (960)
T 1wa5_C 7 VAKFLAESVIASTAKT--SERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKWVDENG-NHLLPANNV 83 (960)
T ss_dssp HHHHHHHTTSGGGHHH--HHHHHHHHHTSTTHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHSBCSSS-CBSSCHHHH
T ss_pred HHHHHHHhcCCCHHHH--HHHHHHHhhcCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCCCccc-CCCCCHHHH
Confidence 3444555667888888 9999999999999999999999988788999999999999999999985432 247999999
Q ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy9795 117 EAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRYRHEFKSQKL 196 (337)
Q Consensus 117 ~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr~~~~s~~l 196 (337)
+.||+.|++++.++++.||++++.+|+.|+++|||++||+|++.|++.++++|...++++|.+|+++|++||+.+++++.
T Consensus 84 ~~ik~~ll~~l~~~~~~ir~~l~~~ia~ia~~d~p~~Wp~ll~~L~~~l~s~~~~~~~~aL~~l~~i~~~~~~~~~~~~~ 163 (960)
T 1wa5_C 84 ELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDEL 163 (960)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSTTTCTTHHHHHHTTCCSSCTTHHHHHHHHHHHHHGGGTTSCCCHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCccchhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhcChHH
Confidence 99999999999998899999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcccCCChhHHHHHHHHHHHHHHHhhhccccCChHHHHHhHHHHHHHHHHhhccC
Q psy9795 197 WTEIKFVLDNFAKPFTELFKATINLVGEHKDNPTALKVIYNSLVVSCKIFYSLNFQDLPEYFEDNMVVWMPALHNLLVTD 276 (337)
Q Consensus 197 ~~el~~il~~~~~~L~~lf~~l~~~~~~~~~~~~~~~~~~e~l~lilKif~~~~~~~lp~~~e~~l~~W~~~f~~iL~~~ 276 (337)
+.+++.++..+.++++++|..+.+.+.....+.+..+...++++.++|+|+++++.++|+++++++..|++.|..+|..+
T Consensus 164 ~~~l~~~l~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 243 (960)
T 1wa5_C 164 FLEIKLVLDVFTAPFLNLLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYLSYS 243 (960)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHTHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHcCC
Confidence 88999999999999999999887766543333333456788999999999999999999999999999999999999998
Q ss_pred CCCCC
Q psy9795 277 VPCLR 281 (337)
Q Consensus 277 ~p~l~ 281 (337)
.|.+.
T Consensus 244 ~p~~~ 248 (960)
T 1wa5_C 244 NPLLE 248 (960)
T ss_dssp SCCCC
T ss_pred CCccc
Confidence 77544
No 2
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=99.89 E-value=1.3e-22 Score=214.67 Aligned_cols=151 Identities=13% Similarity=0.201 Sum_probs=138.6
Q ss_pred HHHHHHhhcccCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHh-CCCChHHHHHHHHHHhccccccCcccCCCCCCC
Q psy9795 33 FFCSTQGVPNHDKNIQLESRSPTENFLESVETNQNYPLLILTLVER-ADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKI 111 (337)
Q Consensus 33 ~~~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~-~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i 111 (337)
-..-+.++|.++.|||+++|++||++|++++++|+|..+|+.++.+ .+.+..+|++|+++|||.|+++|. .+
T Consensus 11 ~~~~l~~~l~~~~s~d~~~r~~Ae~~L~~~~~~p~~~~~l~~il~~~~~~~~~vR~~a~~~Lkn~i~~~w~-------~~ 83 (852)
T 4fdd_A 11 GLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQ-------NF 83 (852)
T ss_dssp HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHTTSHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTTTSGG-------GC
T ss_pred hHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHccC-------CC
Confidence 3444555666777899999999999999999999999999999986 567899999999999999999997 68
Q ss_pred CHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhhhhh
Q psy9795 112 HASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRYRHE 190 (337)
Q Consensus 112 ~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr~~ 190 (337)
++++|..||+.++++|.+.++.||++++.+++.|+++|+|+.||++++.+++.+++++...+++++.+|+.+|+++...
T Consensus 84 ~~~~~~~ik~~ll~~l~~~~~~vr~~~a~~i~~ia~~~~~~~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~ 162 (852)
T 4fdd_A 84 PNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEI 162 (852)
T ss_dssp CHHHHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHTTTTTCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999888889999999999999999999999999999999999999999999999999999998653
No 3
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=99.88 E-value=2.6e-22 Score=195.15 Aligned_cols=151 Identities=17% Similarity=0.241 Sum_probs=134.7
Q ss_pred HhhcccCCCCChhhhHHHHHHHHHHHh--CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCC----CCCC
Q psy9795 38 QGVPNHDKNIQLESRSPTENFLESVET--NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDE----PDKI 111 (337)
Q Consensus 38 ~~tL~~~~spD~~~Rk~AE~~L~~~~~--~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~----~~~i 111 (337)
.++|.++.|||+++|++||++|+++++ .|+|+..|++++.+.+.+..+|++|+++|||.|+++|....+. +..+
T Consensus 4 ~~~L~~~~s~d~~~r~~Ae~~L~~~~~~~~~~~~~~L~~il~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~~~~l 83 (462)
T 1ibr_B 4 ITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAI 83 (462)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTS
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHcCCCChHHHHHHHHHHHHhccccchHHHHHHHhhhhcC
Confidence 345666778999999999999999987 5999999999999876789999999999999999998643221 3469
Q ss_pred CHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCC-CCChHHHHHHHHhhCCC--CHHHHHHHHHHHHHHHhhhh
Q psy9795 112 HASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFP-DKWPSLITDMVAKFGTG--DFHIINGVLHTAHSLFKRYR 188 (337)
Q Consensus 112 ~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP-~~WPeLl~~L~~~l~s~--d~~~~~~aL~~L~~i~k~yr 188 (337)
++++|+.||+.|++.|.+.+..+ ++++.+|+.|+++++| +.||++++.|++.++++ |...+++++.+|+.++++++
T Consensus 84 ~~~~~~~ik~~ll~~l~~~~~~v-~~~~~~i~~ia~~~~~~~~w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~ 162 (462)
T 1ibr_B 84 DANARREVKNYVLQTLGTETYRP-SSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDID 162 (462)
T ss_dssp CHHHHHHHHHHHHHHTTCCCSSS-CSHHHHHHHHHHHHGGGTCCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHhCCCCchh-hHHHHHHHHHHHHhccccccHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999988888 9999999999999999 59999999999999988 89999999999999999875
Q ss_pred h
Q psy9795 189 H 189 (337)
Q Consensus 189 ~ 189 (337)
+
T Consensus 163 ~ 163 (462)
T 1ibr_B 163 P 163 (462)
T ss_dssp G
T ss_pred c
Confidence 4
No 4
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=99.85 E-value=9.1e-20 Score=197.52 Aligned_cols=221 Identities=11% Similarity=0.214 Sum_probs=161.3
Q ss_pred hhcccCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHH
Q psy9795 39 GVPNHDKNIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREA 118 (337)
Q Consensus 39 ~tL~~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~ 118 (337)
+++....|||++.|++||++|++++++|+++..+.+++.++ .+..+|++|+++|||.|+++|. .+++++|..
T Consensus 20 ~~l~~~~~p~~~~r~~Ae~~L~~~~~~p~~~~~l~~iL~~s-~~~~vr~~aa~~Lk~~i~~~W~-------~l~~~~~~~ 91 (1049)
T 3m1i_C 20 QVVSTFYQGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS-TNPQSKFIALSILDKLITRKWK-------LLPNDHRIG 91 (1049)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHSTTGGGGHHHHHHHC-SCHHHHHHHHHHHHHHHHHTGG-------GSCHHHHHH
T ss_pred HHHHHHhCCChHHHHHHHHHHHHHHhCchHHHHHHHHHhhC-CCHHHHHHHHHHHHHHHHhhCc-------cCCHHHHHH
Confidence 33444556777899999999999999999999999999874 4899999999999999999997 799999999
Q ss_pred HHHHHHHHHccCC---------HHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhhhh
Q psy9795 119 IKGLILHLMLTSP---------EAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRYRH 189 (337)
Q Consensus 119 IK~~Ll~~L~~~~---------~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr~ 189 (337)
||+.|++.+.+.+ +.||++++.+++.|+++|||++||++++.+++.++ ++....+++|.+|..++++...
T Consensus 92 ir~~ll~~l~~~~~~~~~~~~~~~i~~kl~~~ia~Ia~~~~p~~Wp~ll~~L~~~~~-~~~~~~~~~l~~L~~l~eev~~ 170 (1049)
T 3m1i_C 92 IRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWPEFIPELIGSSS-SSVNVCENNMIVLKLLSEEVFD 170 (1049)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCCccccchhhHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHc-cChHHHHHHHHHHHHHHHHHHH
Confidence 9999999998742 68999999999999999999999999999999997 4555567777777777765421
Q ss_pred ---hhhhhhhHHHHHHHHHHhhHHHHHHHHHHHHHhcccCCChhHHHHHHHHHHHHHHHhhhc-cccCChHHH-------
Q psy9795 190 ---EFKSQKLWTEIKFVLDNFAKPFTELFKATINLVGEHKDNPTALKVIYNSLVVSCKIFYSL-NFQDLPEYF------- 258 (337)
Q Consensus 190 ---~~~s~~l~~el~~il~~~~~~L~~lf~~l~~~~~~~~~~~~~~~~~~e~l~lilKif~~~-~~~~lp~~~------- 258 (337)
......-+.+++. .+...+..+|..+.+++.... +. ++...+++++.++ .+.+++..+
T Consensus 171 ~~~~~~~~~r~~~lk~---~l~~~~~~i~~~~~~~l~~~~-~~-------~~~~~aL~~l~~~l~wi~~~~~~~~~ll~~ 239 (1049)
T 3m1i_C 171 FSAEQMTQAKALHLKN---SMSKEFEQIFKLCFQVLEQGS-SS-------SLIVATLESLLRYLHWIPYRYIYETNILEL 239 (1049)
T ss_dssp SCTTTSCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCC-CH-------HHHHHHHHHHHHHTTTSCTHHHHSSSHHHH
T ss_pred hcchhhhhHHHHHHHH---HHHHHHHHHHHHHHHHHHhcC-CH-------HHHHHHHHHHHHHHhhCCHHHHhhhhHHHH
Confidence 1011111223332 233334456666666554321 22 2346667777554 345544322
Q ss_pred --------HHhHHHHHHHHHHhhccCCCC
Q psy9795 259 --------EDNMVVWMPALHNLLVTDVPC 279 (337)
Q Consensus 259 --------e~~l~~W~~~f~~iL~~~~p~ 279 (337)
.+.-..|++.+..++....|+
T Consensus 240 l~~~~l~~~~~~~~a~~~L~~i~~~~~~~ 268 (1049)
T 3m1i_C 240 LSTKFMTSPDTRAITLKCLTEVSNLKIPQ 268 (1049)
T ss_dssp HHTHHHHSHHHHHHHHHHHHHHHHCCCCT
T ss_pred HHHHhCCCHhHHHHHHHHHHHHHhCCCCc
Confidence 123345889999999886554
No 5
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=99.84 E-value=8.7e-20 Score=200.47 Aligned_cols=230 Identities=12% Similarity=0.109 Sum_probs=157.4
Q ss_pred hHHHHHHhhcccCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCC
Q psy9795 32 EFFCSTQGVPNHDKNIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKI 111 (337)
Q Consensus 32 ~~~~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i 111 (337)
++.++++.+++++ +|++.|++||++|++++++|+++..+..++.+.+.+..+|++|++.|||.|+++|. .+
T Consensus 12 ~l~~~l~~~~~p~--~~~~~r~~Ae~~L~~~~~~p~~~~~~~~~L~~~s~~~~vR~~A~~~Lk~~I~~~W~-------~l 82 (1204)
T 3a6p_A 12 QLVKAVTVMMDPN--STQRYRLEALKFCEEFKEKCPICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWN-------GM 82 (1204)
T ss_dssp HHHHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHSGG-------GS
T ss_pred HHHHHHHHHhCCC--CChHHHHHHHHHHHHHHhCchHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhcc-------cC
Confidence 3555555555432 37789999999999999999777777776665556899999999999999999997 79
Q ss_pred CHHHHHHHHHHHHHHHccC-------CHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q psy9795 112 HASDREAIKGLILHLMLTS-------PEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLF 184 (337)
Q Consensus 112 ~~e~K~~IK~~Ll~~L~~~-------~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~ 184 (337)
++++|..||+.+++.+.+. ++.||++++.+++.|+++|||++||++++.+++.+++ +....+++|.+|..++
T Consensus 83 ~~e~k~~Ir~~ll~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~d~p~~Wp~ll~~L~~~~~~-~~~~~e~~L~iL~~L~ 161 (1204)
T 3a6p_A 83 SRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQ-GETQTELVMFILLRLA 161 (1204)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHHHSTTTCTTHHHHHHHHHHT-CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHhcC-CHHHHHHHHHHHHHHH
Confidence 9999999999999999753 5789999999999999999999999999999999976 5567899999999999
Q ss_pred hhhh-hhhhhhhhHHHHHHHHHHhhHHHHHHHHHHHHHhccc----------CCChhHHHHHHHHHHHHHHHhhhccccC
Q psy9795 185 KRYR-HEFKSQKLWTEIKFVLDNFAKPFTELFKATINLVGEH----------KDNPTALKVIYNSLVVSCKIFYSLNFQD 253 (337)
Q Consensus 185 k~yr-~~~~s~~l~~el~~il~~~~~~L~~lf~~l~~~~~~~----------~~~~~~~~~~~e~l~lilKif~~~~~~~ 253 (337)
++.. +......-+++++..+..-++ .+|+.+.+++... .++........++...+++++.+...--
T Consensus 162 Eev~~~~~~~~~r~~~l~~~l~~~~~---~I~~~~~~iL~~~~~~~~~~~~~~~~~~~~~~~~~l~~~aL~~l~~~l~Wi 238 (1204)
T 3a6p_A 162 EDVVTFQTLPPQRRRDIQQTLTQNME---RIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWV 238 (1204)
T ss_dssp HHHHTSCCSCHHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHHHHHTTCSTTHHHHHHHHHHHHHHHHHHHTTTTTS
T ss_pred HHHccccchHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHHHHHHHHHHHhcc
Confidence 8732 211111212233333332222 4444444433221 1111111223456678888887665421
Q ss_pred ChHHHHHhHHHHHHHHHHhhc
Q psy9795 254 LPEYFEDNMVVWMPALHNLLV 274 (337)
Q Consensus 254 lp~~~e~~l~~W~~~f~~iL~ 274 (337)
-..++.+.-..+++.+...+.
T Consensus 239 ~~~~i~~~~~~ll~~l~~~l~ 259 (1204)
T 3a6p_A 239 SMSHITAENCKLLEILCLLLN 259 (1204)
T ss_dssp CHHHHHTTTSHHHHHHHHGGG
T ss_pred CHHHHHhccchHHHHHHHHcC
Confidence 112222221235555555444
No 6
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=99.84 E-value=6.1e-20 Score=196.07 Aligned_cols=145 Identities=19% Similarity=0.270 Sum_probs=127.5
Q ss_pred hHHHHHHhhcccCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCC
Q psy9795 32 EFFCSTQGVPNHDKNIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKI 111 (337)
Q Consensus 32 ~~~~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i 111 (337)
++.+++++.. .+||++.|++||++|++++++|+++..+++++.+ +.+..+|++|+++|||.|+++|. .+
T Consensus 25 ~l~~~l~~l~---~~~~~~~r~~A~~~L~~~~~~p~~~~~~~~lL~~-~~~~~vr~~aa~~L~~~i~~~w~-------~l 93 (963)
T 2x19_B 25 NVEKALHQLY---YDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQP-DKVPEIQYFGASALHIKISRYWS-------DI 93 (963)
T ss_dssp HHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHSTTHHHHHHHHTST-TSCHHHHHHHHHHHHHHHHHCGG-------GS
T ss_pred HHHHHHHHHh---cCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHHHhCHH-------hC
Confidence 3444444433 3578899999999999999999999999999876 46899999999999999999997 79
Q ss_pred CHHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCC-----CCHHHHHHHHHHHHHH
Q psy9795 112 HASDREAIKGLILHLMLT---SPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGT-----GDFHIINGVLHTAHSL 183 (337)
Q Consensus 112 ~~e~K~~IK~~Ll~~L~~---~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s-----~d~~~~~~aL~~L~~i 183 (337)
++++|..||+.|++.+.+ .++.||++++.+++.|+++|||++||++++.+++.+++ ++.....++|.+|..+
T Consensus 94 ~~~~~~~ir~~ll~~l~~~~~~~~~ir~kl~~~la~i~~~~~p~~Wp~~l~~l~~~~~~~~~~~~~~~~~~~~l~iL~~l 173 (963)
T 2x19_B 94 PTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCAVADMVRLFQAEDSPVDGQGRCLALLELLTVL 173 (963)
T ss_dssp CGGGHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCC------CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCccccchHHHHHHHHHhhhccCCCcHHHHHHHHHHHHhC
Confidence 999999999999999988 36899999999999999999999999999999999986 3666789999999999
Q ss_pred Hhhh
Q psy9795 184 FKRY 187 (337)
Q Consensus 184 ~k~y 187 (337)
+++.
T Consensus 174 ~ee~ 177 (963)
T 2x19_B 174 PEEF 177 (963)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9753
No 7
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=99.83 E-value=3e-20 Score=194.52 Aligned_cols=151 Identities=15% Similarity=0.197 Sum_probs=134.5
Q ss_pred hhcccC-CCCChhhhHHHHHHHHHHHhC--CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCC----CCC-
Q psy9795 39 GVPNHD-KNIQLESRSPTENFLESVETN--QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDE----PDK- 110 (337)
Q Consensus 39 ~tL~~~-~spD~~~Rk~AE~~L~~~~~~--pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~----~~~- 110 (337)
++|.++ .|||+++|++||++|++++++ |+|+..|++++.+.+.+.++|++|+++|||.|+++|....+. +..
T Consensus 8 ~~L~~~~~s~d~~~r~~Ae~~L~~~~~~~~~~~~~~l~~il~~~~~~~~vR~~A~~~lk~~i~~~w~~~~~~~~~~~~~~ 87 (861)
T 2bpt_A 8 QLLENSILSPDQNIRLTSETQLKKLSNDNFLQFAGLSSQVLIDENTKLEGRILAALTLKNELVSKDSVKTQQFAQRWITQ 87 (861)
T ss_dssp HHHHHHHHCSSHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHTTTCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHcccCcCHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhccCcChHHHHHHHHhHhhh
Confidence 444455 678999999999999999886 999999999999876789999999999999999999643221 234
Q ss_pred CCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCC-CCChHHHHHHHHhhCCC-CHHHHHHHHHHHHHHHhhhh
Q psy9795 111 IHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFP-DKWPSLITDMVAKFGTG-DFHIINGVLHTAHSLFKRYR 188 (337)
Q Consensus 111 i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP-~~WPeLl~~L~~~l~s~-d~~~~~~aL~~L~~i~k~yr 188 (337)
+++++|..||+.+++.|.+.++.+|++++.+++.|+++||| +.||++++.|++.++++ |...+++++.+++.+++++.
T Consensus 88 l~~~~~~~ik~~ll~~l~~~~~~vr~~~~~~l~~i~~~~~p~~~w~~ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~~ 167 (861)
T 2bpt_A 88 VSPEAKNQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESAD 167 (861)
T ss_dssp SCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGTCCHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHhhCcccccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999998899999999999999999999 59999999999999998 99999999999999999875
Q ss_pred h
Q psy9795 189 H 189 (337)
Q Consensus 189 ~ 189 (337)
.
T Consensus 168 ~ 168 (861)
T 2bpt_A 168 P 168 (861)
T ss_dssp T
T ss_pred h
Confidence 3
No 8
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=99.81 E-value=1.7e-19 Score=193.20 Aligned_cols=193 Identities=11% Similarity=0.154 Sum_probs=137.0
Q ss_pred cCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHH
Q psy9795 43 HDKNIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGL 122 (337)
Q Consensus 43 ~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~ 122 (337)
...+||++.|++||+.|+++++.|+++..+++++.. +.+..+|++|+++|||.|+++|. .+++++|..||+.
T Consensus 15 ~~~~~d~~~r~~A~~~L~~~~~~p~~w~~~~~lL~~-~~~~~vr~~aa~~L~~~i~~~w~-------~l~~~~~~~ir~~ 86 (971)
T 2x1g_F 15 SFYRSNSQNQAITHEWLTDAEASPQAWQFSWQLMQL-GKSQEVQFFGAITLHSKLMKHWH-------EVPPENREELKQK 86 (971)
T ss_dssp HHHTSTTTC----CHHHHHTTTSTHHHHHHHHHTCT-TSCHHHHHHHHHHHHHHHHHCGG-------GCCGGGHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHccHh-------hCCHHHHHHHHHH
Confidence 344578899999999999999999999999999876 45899999999999999999997 7999999999999
Q ss_pred HHHHHccC---CHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCC------CHHHHHHHHHHHHHHHhh-hhhhhh
Q psy9795 123 ILHLMLTS---PEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTG------DFHIINGVLHTAHSLFKR-YRHEFK 192 (337)
Q Consensus 123 Ll~~L~~~---~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~------d~~~~~~aL~~L~~i~k~-yr~~~~ 192 (337)
|++.+.+. ++.||++++.+++.|++++|| .||++++.+++.++++ +......+|.+|..++++ +++.
T Consensus 87 ll~~l~~~~~~~~~vr~kl~~~la~i~~~~~p-~Wp~~l~~l~~~~~~~~~~~~~~~~~~~~~l~iL~~l~EEi~~~~-- 163 (971)
T 2x1g_F 87 ILESIVRFAGGPKIVLNRLCISLGAYIVHMLG-EWPGAIEEVINTFQNQRMPNVSADVQLWIMLEVLTAIPEEAQVIH-- 163 (971)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTC-C------HHHHHHHHTC----CHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHccc-cccHHHHHHHHHHhccccccCCCHHHHHHHHHHHHHhHHHHhccC--
Confidence 99999873 689999999999999999999 9999999999999875 567889999999999975 3332
Q ss_pred hhhhHHHHHHHHHHhhHHHHHHHHHHHHHhcccCCChhHHHHHHHHHHHHHHHhhhcc
Q psy9795 193 SQKLWTEIKFVLDNFAKPFTELFKATINLVGEHKDNPTALKVIYNSLVVSCKIFYSLN 250 (337)
Q Consensus 193 s~~l~~el~~il~~~~~~L~~lf~~l~~~~~~~~~~~~~~~~~~e~l~lilKif~~~~ 250 (337)
..+-+.+++..+....+.+..++..+++...+...+.. ..++...++|++.+..
T Consensus 164 ~~~~r~~~~~~l~~~~~~vl~ll~~~l~~~~~~~~~~~----~~~~~~~al~~l~~~~ 217 (971)
T 2x1g_F 164 TSVKRVVLRAEIAKRVQLVIHTVERYLKLQMNRVWDAE----AYSNMNRAVKCVGTWI 217 (971)
T ss_dssp CSSCHHHHHHHHHTTHHHHHHHHHHHHHHHTTSCCCHH----HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcc----chhHHHHHHHHHHHHH
Confidence 11222333444444455444455555443221111111 1234566666665433
No 9
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=99.76 E-value=2.2e-17 Score=178.60 Aligned_cols=222 Identities=10% Similarity=0.194 Sum_probs=155.9
Q ss_pred hHHHHHHhhcccCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCC
Q psy9795 32 EFFCSTQGVPNHDKNIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKI 111 (337)
Q Consensus 32 ~~~~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i 111 (337)
++-+++.... +|+++.|++|+++|+++++.|+++..+.+++.++ .+..+|++|+++|||.|+++|. .+
T Consensus 17 ~Le~av~~ly----~p~~~~r~~A~~~L~~~q~sp~aw~~~~~iL~~s-~~~~vR~faa~~Lk~~I~~~W~-------~L 84 (1023)
T 4hat_C 17 LLDQVVSTFY----QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS-TNPQSKFIALSILDKLITRKWK-------LL 84 (1023)
T ss_dssp HHHHHHHHHH----HCCHHHHHHHHHHHHHHHHCTTGGGGHHHHHHHC-CCHHHHHHHHHHHHHHHHHHGG-------GS
T ss_pred HHHHHHHHHh----CCChHHHHHHHHHHHHHHcCccHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHhhhh-------cC
Confidence 3444444444 4555799999999999999999999999999764 4789999999999999999997 79
Q ss_pred CHHHHHHHHHHHHHHHccC---------CHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy9795 112 HASDREAIKGLILHLMLTS---------PEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHS 182 (337)
Q Consensus 112 ~~e~K~~IK~~Ll~~L~~~---------~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~ 182 (337)
++++|..||+.+++.+.+. ++.++++++.+++.|+++|||++||++++.+++.++++ ......+|.+|..
T Consensus 85 ~~e~~~~Ir~~Ll~~l~~~~~~~~~i~~~~~i~nKLa~~la~I~~~~~p~~Wp~~l~dL~~~l~~~-~~~~~~~L~iL~~ 163 (1023)
T 4hat_C 85 PNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWPEFIPELIGSSSSS-VNVCENNMIVLKL 163 (1023)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSHHHHHHCHHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHTTTC-HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCcccccccHHHHHHHHHHHHHHHHHhChhhchHHHHHHHHHhcCC-HHHHHHHHHHHHH
Confidence 9999999999999999762 35688889999999999999999999999999999765 4567888888888
Q ss_pred HHhhh-hh--hhhhhhhHHHHHHHHHHhhHHHHHHHHHHHHHhcccCCChhHHHHHHHHHHHHHHHhhhcc-ccCChHHH
Q psy9795 183 LFKRY-RH--EFKSQKLWTEIKFVLDNFAKPFTELFKATINLVGEHKDNPTALKVIYNSLVVSCKIFYSLN-FQDLPEYF 258 (337)
Q Consensus 183 i~k~y-r~--~~~s~~l~~el~~il~~~~~~L~~lf~~l~~~~~~~~~~~~~~~~~~e~l~lilKif~~~~-~~~lp~~~ 258 (337)
+.++- ++ ..-+..-+..++..+..- +..++..+..++.... +++ +...++|++.+.+ |.++...+
T Consensus 164 L~EEV~~~~~~~l~~~r~~~lk~~l~~~---~~~I~~ll~~iL~~~~-~~~-------l~~~~L~~l~s~l~WI~i~~i~ 232 (1023)
T 4hat_C 164 LSEEVFDFSAEQMTQAKALHLKNSMSKE---FEQIFKLCFQVLEQGA-SSS-------LIVATLESLLRYLHWIPYRYIY 232 (1023)
T ss_dssp HHHHHHTSCTTTSCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCS-SCH-------HHHHHHHHHHHHTTTSCTHHHH
T ss_pred HHHHHHHhhhccchHHHHHHHHHHHHHH---HHHHHHHHHHHHhCCC-CHH-------HHHHHHHHHHHHHHhCCHHHhc
Confidence 88872 22 100111122333333333 3355555555554322 222 3456777776544 33332211
Q ss_pred H---------------HhHHHHHHHHHHhhccCC
Q psy9795 259 E---------------DNMVVWMPALHNLLVTDV 277 (337)
Q Consensus 259 e---------------~~l~~W~~~f~~iL~~~~ 277 (337)
. +.-..-++.+..++....
T Consensus 233 ~~~ll~~l~~~~L~~~~~r~~A~ecL~eIv~~~~ 266 (1023)
T 4hat_C 233 ETNILELLSTKFMTSPDTRAITLKCLTEVSNLKI 266 (1023)
T ss_dssp SSSHHHHHHTHHHHSHHHHHHHHHHHHHHHTSCC
T ss_pred chhHHHHHHHHHcCCHHHHHHHHHHHHHHHcccc
Confidence 1 122335667777777554
No 10
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=99.74 E-value=3.4e-17 Score=171.64 Aligned_cols=148 Identities=18% Similarity=0.273 Sum_probs=127.7
Q ss_pred hhcccCCCCChhhhHHHHHHHHHHHhC--CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccC----CCCCCCC
Q psy9795 39 GVPNHDKNIQLESRSPTENFLESVETN--QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVE----DEPDKIH 112 (337)
Q Consensus 39 ~tL~~~~spD~~~Rk~AE~~L~~~~~~--pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~----~~~~~i~ 112 (337)
++|....|||+++|++||++|+++..+ |+|+..|++++.+.+.+..+|++|+++|||.+...|...+ ..|..++
T Consensus 5 ~~L~~~~s~d~~~r~~A~~~L~~~~~~~~~~~~~~L~~~l~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~w~~l~ 84 (876)
T 1qgr_A 5 TILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAID 84 (876)
T ss_dssp HHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTSC
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHhcChhhHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHhHHHHHhhhccCC
Confidence 344555678999999999999999886 9999999999998666899999999999999864432100 0012799
Q ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCC-CCChHHHHHHHHhhCCC--CHHHHHHHHHHHHHHHhhh
Q psy9795 113 ASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFP-DKWPSLITDMVAKFGTG--DFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 113 ~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP-~~WPeLl~~L~~~l~s~--d~~~~~~aL~~L~~i~k~y 187 (337)
+++|..||+.+++.+.+.+..+ ++++.+++.|+++++| ++||++++.+.+.++++ +...+++++.+|..+++.+
T Consensus 85 ~~~~~~ik~~ll~~l~~~~~~~-~~~~~~l~~i~~~~~~~~~w~~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~ 161 (876)
T 1qgr_A 85 ANARREVKNYVLHTLGTETYRP-SSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDI 161 (876)
T ss_dssp HHHHHHHHHHHHHHTTTCCSSS-CHHHHHHHHHHHHHGGGTCCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhCCCcHHH-HHHHHHHHHHHHhhCcccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998877778 9999999999999999 89999999999999988 8889999999999999976
No 11
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=99.72 E-value=1.3e-16 Score=172.58 Aligned_cols=143 Identities=17% Similarity=0.246 Sum_probs=124.1
Q ss_pred HHHHhhcccCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHH
Q psy9795 35 CSTQGVPNHDKNIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHAS 114 (337)
Q Consensus 35 ~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e 114 (337)
+.+.+++.+..+||++.|++|+++|++++++|+++..+.+++.++ .+..+|++|++.|||.|+++|. .++++
T Consensus 28 ~~Le~lv~~ly~p~~~~r~qA~~~L~q~q~sp~aw~~~~~iL~~s-~~~~vR~fAa~~L~~~I~~~W~-------~L~~e 99 (1073)
T 3gjx_A 28 NLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAWTRVDTILEFS-QNMNTKYYGLQILENVIKTRWK-------ILPRN 99 (1073)
T ss_dssp HHHHHHHHTTTCSSHHHHHHHHHHHHTSSCCSCHHHHHTCC---C-CSHHHHHHHHHHHHHHHHHTGG-------GSCHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCchHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHhhhh-------hCCHH
Confidence 345555566667788999999999999999999999999998764 5899999999999999999997 79999
Q ss_pred HHHHHHHHHHHHHcc---------CCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Q psy9795 115 DREAIKGLILHLMLT---------SPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 115 ~K~~IK~~Ll~~L~~---------~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k 185 (337)
+|..||+.+++.+.+ .++.++++++.+++.|+++|||+.||++++++++.+++ +....+.+|.+|..+.+
T Consensus 100 ~~~~LR~~Ll~~l~~~~~~~~~~e~~~~vinKLa~~La~I~k~~~P~~Wp~fi~dLv~~~~~-~~~~~~~~L~IL~~L~E 178 (1073)
T 3gjx_A 100 QCEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRT-SESLCQNNMVILKLLSE 178 (1073)
T ss_dssp HHHHHHHHHHHHHHHHHTCGGGGTSCHHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCccccccchHHHHHHHHHHHHHHHHhChhhccHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 999999999999975 13678899999999999999999999999999999864 44678889999999999
Q ss_pred h
Q psy9795 186 R 186 (337)
Q Consensus 186 ~ 186 (337)
+
T Consensus 179 E 179 (1073)
T 3gjx_A 179 E 179 (1073)
T ss_dssp H
T ss_pred H
Confidence 8
No 12
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=99.59 E-value=2.5e-14 Score=154.24 Aligned_cols=142 Identities=8% Similarity=0.140 Sum_probs=119.8
Q ss_pred HHHHHHhhcccCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCC-ChHHHHHHHHHHhccccccCcccCCCCCCC
Q psy9795 33 FFCSTQGVPNHDKNIQLESRSPTENFLESVETNQNYPLLILTLVERADV-DMTIRIAGAVAFKNYVKRNWPLVEDEPDKI 111 (337)
Q Consensus 33 ~~~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~-~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i 111 (337)
..+.++.++++ ++|++.|++|++.|+++++.|+++..+..++.+++. +..+|.+|+..|||.|+ . +
T Consensus 8 v~~Al~~~~~p--~sd~~~r~~A~~~L~~~q~sp~aw~~~~~iL~~~~~~~~~vr~fa~~~L~~~I~-~----------l 74 (980)
T 3ibv_A 8 VENAVEAALDP--SVGPIIKQQATDFIGSLRSSSTGWKICHEIFSEKTKYKPSTRLICLQTLSEKVR-E----------W 74 (980)
T ss_dssp HHHHHHHHHCT--TSCHHHHHHHHHHHHHHHHSTTHHHHHHHHTTCTTTSCHHHHHHHHHHHHHHHH-H----------C
T ss_pred HHHHHHHHhCC--CCCHHHHHHHHHHHHHHHcChhHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH-h----------C
Confidence 34444444432 348899999999999999999999999999987653 89999999999999998 2 5
Q ss_pred CHH----HHHHHHHHHHHHHcc-----CCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCH-HHHHHHHHHHH
Q psy9795 112 HAS----DREAIKGLILHLMLT-----SPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDF-HIINGVLHTAH 181 (337)
Q Consensus 112 ~~e----~K~~IK~~Ll~~L~~-----~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~-~~~~~aL~~L~ 181 (337)
+++ +|..||+.|++.+.+ .++.||++++.+++.|++++||+.||++++.+++.+++++. ..+...|++|.
T Consensus 75 ~~e~~~~~~~~lr~~ll~~l~~~~~~~~~~~IrnKL~~~la~l~~~~~p~~Wp~~i~~l~~~~~~~~~~~~~~~~LriL~ 154 (980)
T 3ibv_A 75 NNESNLLELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQLYPSNWNDFFASLQGVIAASSQSEFSNFYLKVLL 154 (980)
T ss_dssp CTTTSHHHHHHHHHHHHHHHHHCCSTTSCTHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred ChhhhHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhCcccCchHHHHHHHHhcCCChhHHHHHHHHHHH
Confidence 677 999999999999986 35789999999999999999999999999999999987654 45677788888
Q ss_pred HHHhhh
Q psy9795 182 SLFKRY 187 (337)
Q Consensus 182 ~i~k~y 187 (337)
.+.++.
T Consensus 155 ~i~EEv 160 (980)
T 3ibv_A 155 SIGDEI 160 (980)
T ss_dssp HHHHHH
T ss_pred HhHHHH
Confidence 666664
No 13
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=98.51 E-value=6.6e-07 Score=97.91 Aligned_cols=135 Identities=14% Similarity=0.104 Sum_probs=108.8
Q ss_pred hcccCCCCChhhhHHHHHHHHHHHhCC----------ChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCC
Q psy9795 40 VPNHDKNIQLESRSPTENFLESVETNQ----------NYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPD 109 (337)
Q Consensus 40 tL~~~~spD~~~Rk~AE~~L~~~~~~p----------gf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~ 109 (337)
.|....|||++.|++|++.|.+.-+.+ .....|++.+.+ .+..+|.+|+..+.+.+.
T Consensus 11 lL~~l~s~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~d--~~~~vR~~A~~~L~~l~~----------- 77 (1230)
T 1u6g_C 11 LLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLED--KNGEVQNLAVKCLGPLVS----------- 77 (1230)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTC--SSHHHHHHHHHHHHHHHT-----------
T ss_pred HHHhcCCCCHhHHHHHHHHHHHHHcccccCCChhHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHH-----------
Confidence 345566899999999999998765443 245556666653 478999999999988764
Q ss_pred CCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCC---------CChHHHHHHHHhhC-CCCHHHHHHHHHH
Q psy9795 110 KIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPD---------KWPSLITDMVAKFG-TGDFHIINGVLHT 179 (337)
Q Consensus 110 ~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~---------~WPeLl~~L~~~l~-s~d~~~~~~aL~~ 179 (337)
.++++....|+..++..+.+.+..+|...+.+++.|+..-.|. .|++++|.+.+.++ +++...+.+++.+
T Consensus 78 ~~~~~~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~ 157 (1230)
T 1u6g_C 78 KVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDI 157 (1230)
T ss_dssp TSCHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHH
Confidence 2456778899999999998888889999999999999876665 49999999999998 5788899999999
Q ss_pred HHHHHhhh
Q psy9795 180 AHSLFKRY 187 (337)
Q Consensus 180 L~~i~k~y 187 (337)
+.++++.+
T Consensus 158 l~~~~~~~ 165 (1230)
T 1u6g_C 158 MADMLSRQ 165 (1230)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999754
No 14
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=96.64 E-value=0.059 Score=56.37 Aligned_cols=150 Identities=11% Similarity=0.006 Sum_probs=102.3
Q ss_pred HhhhccchhhHHHHHHhhcccCCCCChhhhHHHHHHHHHHHhC-----C-C----hHHHHHHHHHhCCCChHHHHHHHHH
Q psy9795 23 LEDMCDRNGEFFCSTQGVPNHDKNIQLESRSPTENFLESVETN-----Q-N----YPLLILTLVERADVDMTIRIAGAVA 92 (337)
Q Consensus 23 ~~~~~~~~~~~~~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~-----p-g----f~~~Ll~i~~~~~~~~~iRq~AaI~ 92 (337)
|+.... +.+|...+...+....+.|..+|..|--.|+..-+. + + .-..|++.+.+ .+..+|..++..
T Consensus 37 L~~~~~-~p~~~~~l~~il~~~~~~~~~vR~~a~~~Lkn~i~~~w~~~~~~~~~~ik~~ll~~l~~--~~~~vr~~~a~~ 113 (852)
T 4fdd_A 37 LEQLNQ-YPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGD--SSPLIRATVGIL 113 (852)
T ss_dssp HHHHTT-SHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTTTSGGGCCHHHHHHHHHHHHTTTTC--SSHHHHHHHHHH
T ss_pred HHHHHh-CCCHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHcC--CCHHHHHHHHHH
Confidence 444433 456666666677665678899999999988864321 1 1 22334444433 367999999998
Q ss_pred HhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCC--------CCChHHHHHHHHh
Q psy9795 93 FKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFP--------DKWPSLITDMVAK 164 (337)
Q Consensus 93 LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP--------~~WPeLl~~L~~~ 164 (337)
+...++..|.. ..+ .+-..|++.+.+.+..+|.....++..|+..--+ ..++.+++.+++.
T Consensus 114 i~~ia~~~~~~------~wp-----~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~~~ 182 (852)
T 4fdd_A 114 ITTIASKGELQ------NWP-----DLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQF 182 (852)
T ss_dssp HHHHHHHTTTT------TCT-----THHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHTTT
T ss_pred HHHHHHhcCcc------ccH-----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhchhhhcchHHHHHHHHHHH
Confidence 88887765431 111 2455667777776778888888888888754211 2378899999999
Q ss_pred hCCCCHHHHHHHHHHHHHHHhh
Q psy9795 165 FGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 165 l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
+++++...+..|+.+|..+++.
T Consensus 183 l~~~~~~vR~~A~~aL~~~~~~ 204 (852)
T 4fdd_A 183 FKHSSPKIRSHAVACVNQFIIS 204 (852)
T ss_dssp TTCSSHHHHHHHHHHHHTTTTT
T ss_pred hcCCCHHHHHHHHHHHHHHHhc
Confidence 9988888889999999877653
No 15
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=96.63 E-value=0.02 Score=56.33 Aligned_cols=129 Identities=9% Similarity=0.034 Sum_probs=92.6
Q ss_pred CCChhhhHHHHHHHHHHHhC-C------ChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHH
Q psy9795 46 NIQLESRSPTENFLESVETN-Q------NYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREA 118 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~~-p------gf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~ 118 (337)
++|..+|+.|...|..+... | .+...+..+..+ .+..+|..|+..+..... .+++..+..
T Consensus 98 ~~~~~vR~~a~~~L~~l~~~~~~~~~~~~l~~~l~~l~~~--~~~~~R~~a~~~l~~~~~-----------~~~~~~~~~ 164 (588)
T 1b3u_A 98 VEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGG--DWFTSRTSACGLFSVCYP-----------RVSSAVKAE 164 (588)
T ss_dssp SSCHHHHHHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHTC--SSHHHHHHHGGGHHHHTT-----------TSCHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHH-----------hcCHHHHHH
Confidence 56778898888888876553 2 122333333322 367888888877766532 344566777
Q ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCC-CChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhh
Q psy9795 119 IKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPD-KWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 119 IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~-~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~y 187 (337)
+...+...+.+.+..||...+.++..++..--++ .+++++|.+...+++++......++.+|..+++..
T Consensus 165 l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~ 234 (588)
T 1b3u_A 165 LRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLL 234 (588)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcHHhHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhC
Confidence 7777777777778899999999999998763222 35889999999999888888888899988887653
No 16
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=96.58 E-value=0.028 Score=47.89 Aligned_cols=136 Identities=11% Similarity=0.085 Sum_probs=100.8
Q ss_pred HHHHHHhhcccCCCCChhhhHHHHHHHHHHHhC----------CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCc
Q psy9795 33 FFCSTQGVPNHDKNIQLESRSPTENFLESVETN----------QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWP 102 (337)
Q Consensus 33 ~~~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~----------pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~ 102 (337)
....+...|. |+|+.+|..|=..|..+... .|.+..|++++.++ +..+|..|+-.|.|.....
T Consensus 13 ~~~~l~~LL~---s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~-- 85 (210)
T 4db6_A 13 ELPQMVQQLN---SPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGG-- 85 (210)
T ss_dssp CHHHHHHHTT---CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSC--
T ss_pred hhHHHHHHhc---CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhcCC--
Confidence 3445555564 56788999998888887642 26778888888764 6899999999999986321
Q ss_pred ccCCCCCCCCHHHHHHHH-----HHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCC-----ChHHHHHHHHhhCCCCHHH
Q psy9795 103 LVEDEPDKIHASDREAIK-----GLILHLMLTSPEAIQKQLSDATAIIGKSDFPDK-----WPSLITDMVAKFGTGDFHI 172 (337)
Q Consensus 103 ~~~~~~~~i~~e~K~~IK-----~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~-----WPeLl~~L~~~l~s~d~~~ 172 (337)
++.+..+. ..|+..|.+.+..+|...+.++..|+..+ ++. -.+.++.|++.+++++...
T Consensus 86 ----------~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~L~~ll~~~~~~v 154 (210)
T 4db6_A 86 ----------NEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG-NEQIQAVIDAGALPALVQLLSSPNEQI 154 (210)
T ss_dssp ----------HHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSC-HHHHHHHHHTTHHHHHHHHTTCSCHHH
T ss_pred ----------cHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCC-HHHHHHHHHcCcHHHHHHHHcCCCHHH
Confidence 33333333 35666676677899999999999998632 111 1358899999999999999
Q ss_pred HHHHHHHHHHHHhh
Q psy9795 173 INGVLHTAHSLFKR 186 (337)
Q Consensus 173 ~~~aL~~L~~i~k~ 186 (337)
...++.+|..++..
T Consensus 155 ~~~a~~aL~~l~~~ 168 (210)
T 4db6_A 155 LQEALWALSNIASG 168 (210)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999985
No 17
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=96.42 E-value=0.035 Score=60.57 Aligned_cols=109 Identities=7% Similarity=0.069 Sum_probs=85.1
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhh
Q psy9795 70 LLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSD 149 (337)
Q Consensus 70 ~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~D 149 (337)
..|++-+.+ .|..+|..|.--|.+.++.... .++++.-..+-..+++.+.+.+..+|...+.+++.++..-
T Consensus 9 ~~lL~~l~s--~d~~~R~~A~~~L~~~l~~~~~-------~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~ 79 (1230)
T 1u6g_C 9 SNLLEKMTS--SDKDFRFMATNDLMTELQKDSI-------KLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKV 79 (1230)
T ss_dssp HHHHHHTTC--SSHHHHHHHHHHHHHHTSSSCC-------SCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHhcCC--CCHhHHHHHHHHHHHHHccccc-------CCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhC
Confidence 344444333 4789999999989887765422 3444555567777889888778899999999999999765
Q ss_pred CCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhh
Q psy9795 150 FPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 150 fP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~y 187 (337)
-+..|+.+++.++..+.+++...+.++..+|..++..+
T Consensus 80 ~~~~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l 117 (1230)
T 1u6g_C 80 KEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGEL 117 (1230)
T ss_dssp CHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhC
Confidence 44678999999999998887777889999999999876
No 18
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=96.39 E-value=0.23 Score=43.54 Aligned_cols=130 Identities=11% Similarity=0.087 Sum_probs=94.8
Q ss_pred CCChhhhHHHHHHHHHHHhC-C--------ChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHH
Q psy9795 46 NIQLESRSPTENFLESVETN-Q--------NYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDR 116 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~~-p--------gf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K 116 (337)
|.|-..|+.|=..|..+-.. | ++...|...+.+ +.+..+|..|+..+....+. -.. .+ ...-
T Consensus 26 s~~w~~R~~a~~~L~~l~~~~~~~~~~~~~~i~~~L~~~l~k-d~~~~V~~~a~~~l~~la~~-l~~------~~-~~~~ 96 (242)
T 2qk2_A 26 EKKWTLRKESLEVLEKLLTDHPKLENGEYGALVSALKKVITK-DSNVVLVAMAGKCLALLAKG-LAK------RF-SNYA 96 (242)
T ss_dssp CSSHHHHHHHHHHHHHHHHHCSSBCCCCCHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHHHHH-HGG------GG-HHHH
T ss_pred cCCHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHH-Hhh------hH-HHHH
Confidence 56779999998888765332 2 235556666642 24789999999888888753 210 12 1222
Q ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhh
Q psy9795 117 EAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 117 ~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~y 187 (337)
..+=..|+..+.+....||...+.++..++..- .-+.+++.+...+++.++.....++..+..++..+
T Consensus 97 ~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~---~~~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~ 164 (242)
T 2qk2_A 97 SACVPSLLEKFKEKKPNVVTALREAIDAIYAST---SLEAQQESIVESLSNKNPSVKSETALFIARALTRT 164 (242)
T ss_dssp HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS---CHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHc
Confidence 344456666666667899999999999998763 24689999999999989989999999999998876
No 19
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=96.36 E-value=0.29 Score=45.18 Aligned_cols=129 Identities=14% Similarity=0.125 Sum_probs=96.4
Q ss_pred CCChhhhHHHHHHHHHHHh-C---------CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVET-N---------QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~-~---------pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
|+++.+|.+|=..|-.+.+ . .|.+..|++++.+. .+..+|-.|+-.|-|.++.+= +..
T Consensus 93 s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~-~~~~v~~~A~~ALsnl~~~~~-----------~~~ 160 (296)
T 1xqr_A 93 AGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRD-ACDTVRVKALFAISCLVREQE-----------AGL 160 (296)
T ss_dssp CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC-SCHHHHHHHHHHHHHHHTTCH-----------HHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccC-CCHHHHHHHHHHHHHHHcCCc-----------HHH
Confidence 6788999999888866543 2 37888999998863 367899999988988875431 111
Q ss_pred HHHHH----HHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCC-C----hHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 116 REAIK----GLILHLMLTSPEAIQKQLSDATAIIGKSDFPDK-W----PSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 116 K~~IK----~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~-W----PeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
+..+. ..|+.+|.+.+..++...+.+|+.++..+ |+. + .+.++.|+.++.++|...+..++.+|..+++.
T Consensus 161 ~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~-~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 161 LQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGH-PEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC-GGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC-hHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHHHhC
Confidence 12222 25566666677899999999999998762 321 1 25889999999999999999999999999987
Q ss_pred h
Q psy9795 187 Y 187 (337)
Q Consensus 187 y 187 (337)
.
T Consensus 240 ~ 240 (296)
T 1xqr_A 240 F 240 (296)
T ss_dssp C
T ss_pred C
Confidence 4
No 20
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=96.35 E-value=0.032 Score=56.32 Aligned_cols=127 Identities=7% Similarity=0.049 Sum_probs=87.2
Q ss_pred CCCChhhhHHHHHHHHHHHh-CCChHHHHHHHHHh--CCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHH
Q psy9795 45 KNIQLESRSPTENFLESVET-NQNYPLLILTLVER--ADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKG 121 (337)
Q Consensus 45 ~spD~~~Rk~AE~~L~~~~~-~pgf~~~Ll~i~~~--~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~ 121 (337)
.|+|...|+.+-..+..+.+ .|+........+.+ .+.++.+|..|.-.+=+.. +++--..+-.
T Consensus 59 ~s~~~~~Krl~yl~l~~~~~~~~e~~~l~~n~l~kdL~~~n~~ir~~AL~~L~~i~--------------~~~~~~~l~~ 124 (591)
T 2vgl_B 59 QTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIR--------------VDKITEYLCE 124 (591)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHSHHHHHTTHHHHGGGSSSSSHHHHHHHHHHHHTCC--------------SGGGHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHcCC--------------hHHHHHHHHH
Confidence 34556666666666665444 45543333333321 1234566666654443221 2233345556
Q ss_pred HHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCCh--HHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 122 LILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWP--SLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 122 ~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WP--eLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
.+..++.+.++.||+..+.++..|++. .|+.++ ++++.+.++++++|+..+.+|+.+|.+++++
T Consensus 125 ~l~~~L~d~~~~VRk~A~~al~~i~~~-~p~~~~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~ 190 (591)
T 2vgl_B 125 PLRKCLKDEDPYVRKTAAVCVAKLHDI-NAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISES 190 (591)
T ss_dssp HHHHHSSCSCHHHHHHHHHHHHHHHHS-SCCCHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHhh-ChhhcccccHHHHHHHHhCCCChhHHHHHHHHHHHHHhh
Confidence 677788778899999999999999995 499888 5999999999988999999999999999886
No 21
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=96.34 E-value=0.53 Score=48.41 Aligned_cols=141 Identities=9% Similarity=0.051 Sum_probs=97.2
Q ss_pred cccCCCCChhhhHHHHHHHHHHHhC-------CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCH
Q psy9795 41 PNHDKNIQLESRSPTENFLESVETN-------QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHA 113 (337)
Q Consensus 41 L~~~~spD~~~Rk~AE~~L~~~~~~-------pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~ 113 (337)
+..-.++++.+|+++-..|..+-.. |++...|++.+.++ .+..+|..|...++...+. +... ..+-.
T Consensus 101 l~~l~~~~~~vr~~~~~~l~~i~~~~~p~~~w~~ll~~L~~~l~~~-~~~~~r~~al~~l~~l~~~-~~~~----~~~~~ 174 (861)
T 2bpt_A 101 LTALVSIEPRIANAAAQLIAAIADIELPHGAWPELMKIMVDNTGAE-QPENVKRASLLALGYMCES-ADPQ----SQALV 174 (861)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHHHHHHGGGTCCHHHHHHHHHHTSTT-SCHHHHHHHHHHHHHHHHT-SSTT----SSTTG
T ss_pred HHHHCCCchHHHHHHHHHHHHHHHhhCcccccHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHc-CChh----hhHHH
Confidence 3333456788999998888775432 34555566655442 2678999998888777654 4311 00113
Q ss_pred HHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHh---hhCC--CCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 114 SDREAIKGLILHLMLTS--PEAIQKQLSDATAIIGK---SDFP--DKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 114 e~K~~IK~~Ll~~L~~~--~~~Ir~ql~~~i~~Ia~---~DfP--~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
.....+-..++..+.+. +..||.....++..++. ..+. ..|+.+++.+.+.+++++......++.+|..+++.
T Consensus 175 ~~~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~ 254 (861)
T 2bpt_A 175 SSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSK 254 (861)
T ss_dssp GGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHccChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 34556666777777775 67899999888887643 2222 13678999999999888999999999999999998
Q ss_pred h
Q psy9795 187 Y 187 (337)
Q Consensus 187 y 187 (337)
|
T Consensus 255 ~ 255 (861)
T 2bpt_A 255 Y 255 (861)
T ss_dssp H
T ss_pred H
Confidence 6
No 22
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=96.28 E-value=0.083 Score=46.49 Aligned_cols=143 Identities=10% Similarity=0.053 Sum_probs=101.1
Q ss_pred hhhHHHHHHhhcccCCCCChhhhHHHHHHHHHHHh--CCChHH---HHHHHHHh--CCCChHHHHHHHHHHhccccccCc
Q psy9795 30 NGEFFCSTQGVPNHDKNIQLESRSPTENFLESVET--NQNYPL---LILTLVER--ADVDMTIRIAGAVAFKNYVKRNWP 102 (337)
Q Consensus 30 ~~~~~~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~--~pgf~~---~Ll~i~~~--~~~~~~iRq~AaI~LKN~V~~~W~ 102 (337)
..++...+...+.. ++|..+|+.|=..|..+.. .+.|.. .++..+.. .+....+|..|...+++.+...
T Consensus 54 ~~~i~~~L~~~l~k--d~~~~V~~~a~~~l~~la~~l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~-- 129 (242)
T 2qk2_A 54 YGALVSALKKVITK--DSNVVLVAMAGKCLALLAKGLAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYAST-- 129 (242)
T ss_dssp CHHHHHHHHHHHHH--CSCHHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS--
T ss_pred HHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC--
Confidence 44555566555631 3577899999888887654 233322 22222221 1346899999999999987632
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhh-----CCCCChHHHHHHHHhhCCCCHHHHHHHH
Q psy9795 103 LVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSD-----FPDKWPSLITDMVAKFGTGDFHIINGVL 177 (337)
Q Consensus 103 ~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~D-----fP~~WPeLl~~L~~~l~s~d~~~~~~aL 177 (337)
.+ ..+=..++..+.+.+..+|......|..++..- +...++.++|.+...++..+...+..|.
T Consensus 130 -------~~-----~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l~~l~p~l~~~l~D~~~~VR~~A~ 197 (242)
T 2qk2_A 130 -------SL-----EAQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSA 197 (242)
T ss_dssp -------CH-----HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred -------CH-----HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHhcCCChHHHHHHH
Confidence 11 234466777777777899999999999976542 2246899999999999989999999999
Q ss_pred HHHHHHHhhhh
Q psy9795 178 HTAHSLFKRYR 188 (337)
Q Consensus 178 ~~L~~i~k~yr 188 (337)
.++..+++...
T Consensus 198 ~~l~~l~~~vg 208 (242)
T 2qk2_A 198 EALGTLIKLMG 208 (242)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHcC
Confidence 99999998763
No 23
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=95.96 E-value=0.83 Score=40.71 Aligned_cols=136 Identities=10% Similarity=0.045 Sum_probs=93.1
Q ss_pred CCCChhhhHHHHHHHHH-H-HhCC-------C---hHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCC
Q psy9795 45 KNIQLESRSPTENFLES-V-ETNQ-------N---YPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIH 112 (337)
Q Consensus 45 ~spD~~~Rk~AE~~L~~-~-~~~p-------g---f~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~ 112 (337)
.|++-..|++|-..|.. + ++.| + ++..|...+.+ ..+..+|..|+-.+....+.- .. ..+.
T Consensus 26 ~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~-D~n~~v~~~A~~al~~la~~l-~~-----~~f~ 98 (249)
T 2qk1_A 26 TSSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQK-DANIQAVALAAQSVELICDKL-KT-----PGFS 98 (249)
T ss_dssp TCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHHHHHH-CT-----TTSC
T ss_pred hcCCHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHhc-cc-----cccc
Confidence 36678999999988877 5 4422 2 34455556544 346788999988887776321 10 0222
Q ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCC-CC---ChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhh
Q psy9795 113 ASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFP-DK---WPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 113 ~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP-~~---WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~y 187 (337)
..--..+=..+++.+.+....|+.....++..|+.+--| .. =+.+++.|+..+++.++.....++.++..+++..
T Consensus 99 ~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~ 177 (249)
T 2qk1_A 99 KDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEE 177 (249)
T ss_dssp HHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHc
Confidence 111122333555555555678999999999999986433 11 4589999999999999999999999999999875
No 24
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=95.91 E-value=0.062 Score=52.73 Aligned_cols=128 Identities=8% Similarity=-0.037 Sum_probs=75.2
Q ss_pred CCChhhhHHHHHHHHHHHh---CCChHHHHHHHHHh--CCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHH
Q psy9795 46 NIQLESRSPTENFLESVET---NQNYPLLILTLVER--ADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIK 120 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~---~pgf~~~Ll~i~~~--~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK 120 (337)
+++.++|+.+-..|..+.. .+.+...++.++.. .+.+..+|..|+-.+++..... ++ +.++
T Consensus 59 d~~~~vr~~~~~~L~~~~~~~~~~~~~~~ll~~L~~l~~~~~~~vR~~a~~~L~~l~~~~-----------~~---~~~~ 124 (588)
T 1b3u_A 59 YDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEH-----------SP---SDLE 124 (588)
T ss_dssp CCCHHHHHHHHHHHTTCSGGGTSGGGGGGGHHHHHHHTTSSCHHHHHHHHHHHHHHHTTS-----------CH---HHHH
T ss_pred CCcHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHC-----------CH---HHHH
Confidence 4555666666655554322 12232333322210 1124566666666666554321 11 1233
Q ss_pred HHHHHHH----ccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhh
Q psy9795 121 GLILHLM----LTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 121 ~~Ll~~L----~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~y 187 (337)
+.+++.+ .+.+..+|...+.++..++.+--+..++++++.+.+.+++++...+..++.+|..+++..
T Consensus 125 ~~l~~~l~~l~~~~~~~~R~~a~~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~ 195 (588)
T 1b3u_A 125 AHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVL 195 (588)
T ss_dssp HTHHHHHHHHHTCSSHHHHHHHGGGHHHHTTTSCHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 3333333 233456787778888877755323468899999999998888888899999999998764
No 25
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=95.80 E-value=0.045 Score=56.65 Aligned_cols=91 Identities=7% Similarity=0.047 Sum_probs=70.2
Q ss_pred CChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHhhh-------CC
Q psy9795 81 VDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTS--PEAIQKQLSDATAIIGKSD-------FP 151 (337)
Q Consensus 81 ~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~--~~~Ir~ql~~~i~~Ia~~D-------fP 151 (337)
.+..+|+.|..+||+ |. ++++..+...|++.+.+. +..+|...+.++......+ ++
T Consensus 13 ~d~~~r~~A~~~L~~-----~~----------~~~~~~~~~~L~~~l~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~ 77 (876)
T 1qgr_A 13 PDRLELEAAQKFLER-----AA----------VENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQ 77 (876)
T ss_dssp SCHHHHHHHHHHHHH-----HH----------HHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-----HH----------hcChhhHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHhHHHHH
Confidence 478999999999988 32 234567888999999874 4688998899999877544 34
Q ss_pred CCChHHHHH--------HHHhhCCCCHHHHHHHHHHHHHHHhhh
Q psy9795 152 DKWPSLITD--------MVAKFGTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 152 ~~WPeLl~~--------L~~~l~s~d~~~~~~aL~~L~~i~k~y 187 (337)
..|+.+.+. +++.+.+++... ..+..++..+++..
T Consensus 78 ~~w~~l~~~~~~~ik~~ll~~l~~~~~~~-~~~~~~l~~i~~~~ 120 (876)
T 1qgr_A 78 QRWLAIDANARREVKNYVLHTLGTETYRP-SSASQCVAGIACAE 120 (876)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHTTTCCSSS-CHHHHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHHhCCCcHHH-HHHHHHHHHHHHhh
Confidence 578877666 888887776666 88999999998863
No 26
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=95.66 E-value=0.23 Score=41.92 Aligned_cols=46 Identities=15% Similarity=0.103 Sum_probs=21.9
Q ss_pred CCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHh
Q psy9795 46 NIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFK 94 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LK 94 (337)
++|+.+|..|=..|..+.. ++....|++.+.++ +..+|..|+-.|-
T Consensus 25 ~~~~~vr~~A~~~L~~~~~-~~~~~~L~~~l~~~--~~~vr~~a~~~L~ 70 (201)
T 3ltj_A 25 DDSYYVRRAAAYALGKIGD-ERAVEPLIKALKDE--DAWVRRAAADALG 70 (201)
T ss_dssp CSCHHHHHHHHHHHHHHCC-GGGHHHHHHHTTCS--SHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC-hhHHHHHHHHHcCC--CHHHHHHHHHHHH
Confidence 3445555555555554432 23444455544322 4455555554443
No 27
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=95.56 E-value=0.23 Score=42.20 Aligned_cols=120 Identities=9% Similarity=0.045 Sum_probs=88.0
Q ss_pred HHHHHHhhcccCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCC
Q psy9795 33 FFCSTQGVPNHDKNIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIH 112 (337)
Q Consensus 33 ~~~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~ 112 (337)
....+...|. ++|+.+|..|=..|..+.. ++....|++.+.++ +..+|..|+-.|.+.-.
T Consensus 20 ~~~~L~~~L~---~~~~~vR~~A~~~L~~~~~-~~~~~~L~~~l~~~--~~~vr~~a~~aL~~~~~-------------- 79 (211)
T 3ltm_A 20 KVEMYIKNLQ---DDSYYVRRAAAYALGKIGD-ERAVEPLIKALKDE--DAWVRRAAADALGQIGD-------------- 79 (211)
T ss_dssp GHHHHHHHTT---CSSHHHHHHHHHHHHHHCC-GGGHHHHHHHTTCS--CHHHHHHHHHHHHHHCC--------------
T ss_pred HHHHHHHHHc---CCCHHHHHHHHHHHHHhCC-ccHHHHHHHHHcCC--CHHHHHHHHHHHHhhCC--------------
Confidence 3334434454 6788999999999988754 56788888887753 78999999988866521
Q ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy9795 113 ASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSL 183 (337)
Q Consensus 113 ~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i 183 (337)
+ ..-..|+..+.+.+..+|...+.++..+.. ++.++.|...+.++|......++.+|..+
T Consensus 80 ~----~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~-------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~ 139 (211)
T 3ltm_A 80 E----RAVEPLIKALKDEDGWVRQSAAVALGQIGD-------ERAVEPLIKALKDEDWFVRIAAAFALGEI 139 (211)
T ss_dssp G----GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-------GGGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred H----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc-------HHHHHHHHHHHhCCCHHHHHHHHHHHHHc
Confidence 0 122455667777778899888888887743 56788888888888888888888888876
No 28
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=95.31 E-value=0.48 Score=40.14 Aligned_cols=110 Identities=10% Similarity=0.062 Sum_probs=86.5
Q ss_pred CCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHH
Q psy9795 46 NIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILH 125 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~ 125 (337)
++|+.+|..|=..|..+. .++....|...+.++ +..+|..|+-.|.+.-. + .....|+.
T Consensus 61 ~~~~~vr~~a~~aL~~~~-~~~~~~~L~~~l~~~--~~~vr~~a~~aL~~~~~--------------~----~~~~~L~~ 119 (211)
T 3ltm_A 61 DEDAWVRRAAADALGQIG-DERAVEPLIKALKDE--DGWVRQSAAVALGQIGD--------------E----RAVEPLIK 119 (211)
T ss_dssp CSCHHHHHHHHHHHHHHC-CGGGHHHHHHHTTCS--SHHHHHHHHHHHHHHCC--------------G----GGHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhC-CHHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCc--------------H----HHHHHHHH
Confidence 568899999999998875 466888888887653 68999999988876521 1 12345667
Q ss_pred HHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy9795 126 LMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSL 183 (337)
Q Consensus 126 ~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i 183 (337)
.+.+.+..||...+.++..+. -++.++.|...++++|......+..+|..+
T Consensus 120 ~l~d~~~~vr~~a~~aL~~~~-------~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~ 170 (211)
T 3ltm_A 120 ALKDEDWFVRIAAAFALGEIG-------DERAVEPLIKALKDEDGWVRQSAADALGEI 170 (211)
T ss_dssp HTTCSSHHHHHHHHHHHHHHC-------CGGGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHcC-------CHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 777777899999999998884 356889999999888888888888888876
No 29
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=95.26 E-value=0.25 Score=42.58 Aligned_cols=126 Identities=13% Similarity=0.169 Sum_probs=93.4
Q ss_pred CCChhhhHHHHHHHHHHHhC----------CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVETN----------QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~~----------pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
++|+++|..|-..|..+... .|.+..|++++.+. +..+|..|+-.|.|..... ++.
T Consensus 13 ~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~--~~~v~~~a~~~L~~l~~~~------------~~~ 78 (252)
T 4hxt_A 13 STDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTST--DSEVQKEAARALANIASGP------------DEA 78 (252)
T ss_dssp CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSC------------HHH
T ss_pred CCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCC--CHHHHHHHHHHHHHHHcCC------------hHH
Confidence 45678888888888776543 37888888888764 5899999999999986431 222
Q ss_pred HHHH-----HHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCC-----hHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Q psy9795 116 REAI-----KGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKW-----PSLITDMVAKFGTGDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 116 K~~I-----K~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~W-----PeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k 185 (337)
+..+ =..++..+.+.+..+|...+.++..++..+ |+.- .+.++.|++.+.+++......++.+|..++.
T Consensus 79 ~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~ 157 (252)
T 4hxt_A 79 IKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGP-DEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAS 157 (252)
T ss_dssp HHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSC-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence 2222 234555666667899999999999999532 1111 2578999999999999999999999999987
Q ss_pred h
Q psy9795 186 R 186 (337)
Q Consensus 186 ~ 186 (337)
.
T Consensus 158 ~ 158 (252)
T 4hxt_A 158 G 158 (252)
T ss_dssp S
T ss_pred C
Confidence 5
No 30
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=95.18 E-value=0.24 Score=41.75 Aligned_cols=110 Identities=10% Similarity=0.079 Sum_probs=86.5
Q ss_pred CCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHH
Q psy9795 46 NIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILH 125 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~ 125 (337)
++|+.+|..|-..|..+. .++....|...+.++ +..+|..|+-.|.+.-. + .....|+.
T Consensus 56 ~~~~~vr~~a~~~L~~~~-~~~~~~~L~~~l~d~--~~~vr~~a~~aL~~~~~--------------~----~~~~~L~~ 114 (201)
T 3ltj_A 56 DEDAWVRRAAADALGQIG-DERAVEPLIKALKDE--DGWVRQSAAVALGQIGD--------------E----RAVEPLIK 114 (201)
T ss_dssp CSSHHHHHHHHHHHHHHC-CGGGHHHHHHHTTCS--SHHHHHHHHHHHHHHCC--------------G----GGHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhC-CHHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCc--------------H----HHHHHHHH
Confidence 678899999999998774 467888888887653 78999999988876421 1 12345667
Q ss_pred HHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy9795 126 LMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSL 183 (337)
Q Consensus 126 ~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i 183 (337)
.+.+.+..||...+.++..+.. ++.++.|...+.+++......++.+|..+
T Consensus 115 ~l~d~~~~vr~~a~~aL~~~~~-------~~~~~~L~~~l~d~~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 115 ALKDEDWFVRIAAAFALGEIGD-------ERAVEPLIKALKDEDGWVRQSAADALGEI 165 (201)
T ss_dssp HTTCSSHHHHHHHHHHHHHHTC-------GGGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHhCC-------HHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 7777778999999999988853 57888999999988888888999988877
No 31
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=94.95 E-value=0.2 Score=47.37 Aligned_cols=95 Identities=6% Similarity=-0.078 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhh----CCCCChHHH
Q psy9795 83 MTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSD----FPDKWPSLI 158 (337)
Q Consensus 83 ~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~D----fP~~WPeLl 158 (337)
..+|..|+-.|+...... . +..-..+-..+.+.+.+.+..+|.....+++.|+..- +...-++++
T Consensus 342 ~~~r~~a~~~L~~l~~~~-~----------~~~~~~~~~~l~~~l~~~~~~~r~aal~~l~~l~~~~~~~~~~~~l~~~~ 410 (462)
T 1ibr_B 342 WNPCKAAGVCLMLLATCC-E----------DDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAM 410 (462)
T ss_dssp CSHHHHHHHHHHHHHHHT-T----------TTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHH
T ss_pred chHHHHHHHHHHHHHHhc-c----------HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 478888888888776542 1 1222344455556666667889999999999998632 223568999
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHHHHhhhh
Q psy9795 159 TDMVAKFGTGDFHIINGVLHTAHSLFKRYR 188 (337)
Q Consensus 159 ~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr 188 (337)
+.++..++++++..+..|..+|..+++...
T Consensus 411 ~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~~ 440 (462)
T 1ibr_B 411 PTLIELMKDPSVVVRDTAAWTVGRICELLP 440 (462)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999764
No 32
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=94.82 E-value=0.064 Score=50.88 Aligned_cols=110 Identities=4% Similarity=0.006 Sum_probs=80.9
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHH-HHHHHHHHHHccC-CHHHHHHHHHHHHHHH
Q psy9795 69 PLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDRE-AIKGLILHLMLTS-PEAIQKQLSDATAIIG 146 (337)
Q Consensus 69 ~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~-~IK~~Ll~~L~~~-~~~Ir~ql~~~i~~Ia 146 (337)
+..|++.+.++ +..+|..|+..|++.+...+.. .+..-.+. .+-..|++.|.+. +..+|...+.++..|+
T Consensus 22 l~~l~~~l~s~--~~~~r~~A~~~L~~l~~~~~~~------~~~~~~~~~~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~ 93 (450)
T 2jdq_A 22 TSDMIEMIFSK--SPEQQLSATQKFRKLLSKEPNP------PIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIA 93 (450)
T ss_dssp CHHHHHHHHSS--CHHHHHHHHHHHHHHHHSSSSC------CHHHHHTSTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC--CHHHHHHHHHHHHHHhcCCCCC------cHHHHHHcCCcHHHHHHHHCCCCCHHHHHHHHHHHHHHh
Confidence 55667776553 6899999999999988765531 22111122 4555677777776 6789999999999999
Q ss_pred hhhC--CCC--ChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 147 KSDF--PDK--WPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 147 ~~Df--P~~--WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
..+- ... ..+.++.+++.+++++....+.++.+|..++..
T Consensus 94 ~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~ 137 (450)
T 2jdq_A 94 SGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGD 137 (450)
T ss_dssp SSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccC
Confidence 7421 111 257999999999999999999999999999875
No 33
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=94.81 E-value=0.31 Score=43.41 Aligned_cols=123 Identities=10% Similarity=0.077 Sum_probs=86.2
Q ss_pred CCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHH
Q psy9795 46 NIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILH 125 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~ 125 (337)
++|+.+|..|-..|..+. .++....|+..+.++ +..+|..|+-.|-+.-. . + +.. ..+-..+..
T Consensus 34 ~~~~~vr~~A~~~L~~~~-~~~~~~~L~~~l~d~--~~~vR~~A~~aL~~l~~---~--~-------~~~-~~l~~~L~~ 97 (280)
T 1oyz_A 34 DHNSLKRISSARVLQLRG-GQDAVRLAIEFCSDK--NYIRRDIGAFILGQIKI---C--K-------KCE-DNVFNILNN 97 (280)
T ss_dssp CSSHHHHHHHHHHHHHHC-CHHHHHHHHHHHTCS--SHHHHHHHHHHHHHSCC---C--T-------TTH-HHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHccC-CchHHHHHHHHHcCC--CHHHHHHHHHHHHHhcc---c--c-------ccc-hHHHHHHHH
Confidence 568899999999998775 466788888887764 68999999988865421 0 0 111 112222332
Q ss_pred -HHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Q psy9795 126 -LMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 126 -~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k 185 (337)
++.+.+..+|...+.++..+...+ |...+++++.+...++++|......+..+|..+..
T Consensus 98 ~~~~d~~~~vr~~a~~aL~~l~~~~-~~~~~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~ 157 (280)
T 1oyz_A 98 MALNDKSACVRATAIESTAQRCKKN-PIYSPKIVEQSQITAFDKSTNVRRATAFAISVIND 157 (280)
T ss_dssp HHHHCSCHHHHHHHHHHHHHHHHHC-GGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC--
T ss_pred HHhcCCCHHHHHHHHHHHHHHhccC-CcccHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCC
Confidence 233456789999999999998654 33457899999999999888888888888876543
No 34
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=94.73 E-value=0.31 Score=43.36 Aligned_cols=119 Identities=9% Similarity=0.049 Sum_probs=83.5
Q ss_pred CCCChhhhHHHHHHHHHHHhCCChHHHHHHHH----HhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHH
Q psy9795 45 KNIQLESRSPTENFLESVETNQNYPLLILTLV----ERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIK 120 (337)
Q Consensus 45 ~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~----~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK 120 (337)
.++|+.+|..|-..|.++...+.....++.++ .+ +.+..+|..|+-.|-+.-... ......+-
T Consensus 64 ~d~~~~vR~~A~~aL~~l~~~~~~~~~l~~~L~~~~~~-d~~~~vr~~a~~aL~~l~~~~------------~~~~~~~~ 130 (280)
T 1oyz_A 64 SDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALN-DKSACVRATAIESTAQRCKKN------------PIYSPKIV 130 (280)
T ss_dssp TCSSHHHHHHHHHHHHHSCCCTTTHHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHHHHHC------------GGGHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhccccccchHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHhccC------------CcccHHHH
Confidence 36788999999999988765555444444433 23 347899999998887754221 00112344
Q ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy9795 121 GLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSL 183 (337)
Q Consensus 121 ~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i 183 (337)
..|+..+.+.+..+|...+.++..+.. |+.++.|...+++++......+...|..+
T Consensus 131 ~~L~~~l~d~~~~vR~~a~~aL~~~~~-------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~ 186 (280)
T 1oyz_A 131 EQSQITAFDKSTNVRRATAFAISVIND-------KATIPLLINLLKDPNGDVRNWAAFAININ 186 (280)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHTC----------CCHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHhcCC-------HHHHHHHHHHHcCCCHHHHHHHHHHHHhh
Confidence 567777777788999999988887754 34788888888888888888888888776
No 35
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=94.55 E-value=0.11 Score=44.83 Aligned_cols=129 Identities=11% Similarity=0.098 Sum_probs=96.5
Q ss_pred CCChhhhHHHHHHHHHHHh-C---------CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVET-N---------QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~-~---------pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
++|..+|..|=..|..+.. . .|.+..|++++.+. +..+|..|+-.|.|..... ++.
T Consensus 97 ~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~--~~~~~~~a~~~L~~l~~~~------------~~~ 162 (252)
T 4hxt_A 97 STDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST--DSEVQKEAARALANIASGP------------DEA 162 (252)
T ss_dssp CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSC------------HHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHcCC------------HHH
Confidence 5678999999998888773 2 36788888888764 5889999999999987531 222
Q ss_pred -HHH----HHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCC-----ChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Q psy9795 116 -REA----IKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDK-----WPSLITDMVAKFGTGDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 116 -K~~----IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~-----WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k 185 (337)
+.. +=..|++.+.+.+..+|...+.++..++..+ |+. =.+.++.+++.+++++......++.+|..++.
T Consensus 163 ~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~-~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 241 (252)
T 4hxt_A 163 IKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGP-TSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENIKS 241 (252)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSB-HHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHCCCcHHHHHHHHHHHHHHHc
Confidence 122 2345666666667899999999999998632 111 13578999999999999999999999999998
Q ss_pred hhhh
Q psy9795 186 RYRH 189 (337)
Q Consensus 186 ~yr~ 189 (337)
....
T Consensus 242 ~~~~ 245 (252)
T 4hxt_A 242 GGWL 245 (252)
T ss_dssp TCBC
T ss_pred CCCc
Confidence 7543
No 36
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=94.47 E-value=0.17 Score=42.84 Aligned_cols=126 Identities=11% Similarity=0.039 Sum_probs=91.4
Q ss_pred CCChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
++|+.+|..|=..|..+.. ..|.+..|+.++.+. +..+|..|+-.|.|..... ++.
T Consensus 65 ~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~------------~~~ 130 (210)
T 4db6_A 65 SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGG------------NEQ 130 (210)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSC------------HHH
T ss_pred CCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCC--cHHHHHHHHHHHHHHHcCC------------HHH
Confidence 4578999999888887653 246788888888764 6899999999999987431 222
Q ss_pred H-HHH----HHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCC----ChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Q psy9795 116 R-EAI----KGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDK----WPSLITDMVAKFGTGDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 116 K-~~I----K~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~----WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k 185 (337)
+ ..+ =..|++.+.+.+..++...+.++..++...-+.. =.+.++.|++.+++++......++.+|..++.
T Consensus 131 ~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 131 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQS 209 (210)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHhc
Confidence 2 222 2345566666678899999999999987521110 12578899999998888888999999888754
No 37
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=94.35 E-value=0.1 Score=45.46 Aligned_cols=126 Identities=11% Similarity=0.114 Sum_probs=93.1
Q ss_pred CCChhhhHHHHHHHHHHHhC----------CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVETN----------QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~~----------pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
++++++|..|=..|..+... .|.+..|++++.++ +..+|..|+-.|.|..... +..
T Consensus 65 ~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~------------~~~ 130 (252)
T 4db8_A 65 SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGG------------NEQ 130 (252)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS--CHHHHHHHHHHHHHHTTSC------------HHH
T ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHhhcCC------------chH
Confidence 45678999998888877652 56788888888774 6899999999999985321 222
Q ss_pred -HHHHH----HHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCC-----hHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Q psy9795 116 -REAIK----GLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKW-----PSLITDMVAKFGTGDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 116 -K~~IK----~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~W-----PeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k 185 (337)
+..++ ..|++.|.+.+..+|...+.++..++..+ |+.- .+.++.|++.+.+++......++.+|..++.
T Consensus 131 ~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 209 (252)
T 4db8_A 131 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG-NEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIAS 209 (252)
T ss_dssp HHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSC-HHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCC-hHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhc
Confidence 22233 34555555567889999999999998643 1111 3578999999999999999999999999986
Q ss_pred h
Q psy9795 186 R 186 (337)
Q Consensus 186 ~ 186 (337)
.
T Consensus 210 ~ 210 (252)
T 4db8_A 210 G 210 (252)
T ss_dssp S
T ss_pred C
Confidence 4
No 38
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=94.12 E-value=1.2 Score=41.87 Aligned_cols=125 Identities=10% Similarity=0.058 Sum_probs=94.6
Q ss_pred ChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHH
Q psy9795 48 QLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDRE 117 (337)
Q Consensus 48 D~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~ 117 (337)
|+.+|..|-..|..+.. ..|....|++++.++ +..+|..|+-.|.|..... ++.|.
T Consensus 78 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~--~~~vr~~a~~~L~~l~~~~------------~~~~~ 143 (450)
T 2jdq_A 78 NCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSE--FEDVQEQAVWALGNIAGDS------------TMCRD 143 (450)
T ss_dssp CHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHTTC------------HHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHccCC------------HHHHH
Confidence 67889999888877654 268889999988764 7899999999999886532 22222
Q ss_pred HH-----HHHHHHHHcc-CCHHHHHHHHHHHHHHHhhhCCC----CChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 118 AI-----KGLILHLMLT-SPEAIQKQLSDATAIIGKSDFPD----KWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 118 ~I-----K~~Ll~~L~~-~~~~Ir~ql~~~i~~Ia~~DfP~----~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
.+ -..++..+.+ .+..+|...+.++..++...-|. .-.++++.|++.+.++|...+..++.+|..++..
T Consensus 144 ~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~ 222 (450)
T 2jdq_A 144 YVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDG 222 (450)
T ss_dssp HHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSS
T ss_pred HHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHCC
Confidence 22 2345556654 46789999999999999765332 2368999999999999988888999999988864
No 39
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=93.37 E-value=0.36 Score=48.54 Aligned_cols=125 Identities=10% Similarity=-0.013 Sum_probs=84.7
Q ss_pred CCChhhhHHHHHHHHHHHh--C--CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHH
Q psy9795 46 NIQLESRSPTENFLESVET--N--QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKG 121 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~--~--pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~ 121 (337)
|+|...|+.|=..+-.+.. . +.....+++.+.+ .+..+|.++..+++++.+.. ++.-..+-+
T Consensus 24 ~~~~~~k~~~~~kli~~~~~G~d~~~~~~~vi~l~~s--~~~~~Krl~yl~l~~~~~~~------------~e~~~l~~n 89 (591)
T 2vgl_B 24 NEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT--DNLELKKLVYLYLMNYAKSQ------------PDMAIMAVN 89 (591)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTCCCGGGHHHHHHTTSS--SCHHHHHHHHHHHHHHHHHS------------HHHHHTTHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHcccC------------chHHHHHHH
Confidence 4566777777666654332 2 2334445555443 47899999999999876531 222222334
Q ss_pred HHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhh
Q psy9795 122 LILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 122 ~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~y 187 (337)
.+..-+.+.++.+|... +..++..--|+-++.+++.+.+++.++++.....|..++..+++.+
T Consensus 90 ~l~kdL~~~n~~ir~~A---L~~L~~i~~~~~~~~l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~ 152 (591)
T 2vgl_B 90 SFVKDCEDPNPLIRALA---VRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDIN 152 (591)
T ss_dssp HHGGGSSSSSHHHHHHH---HHHHHTCCSGGGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHcCCCCHHHHHHH---HHHHHcCChHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhC
Confidence 44445555667888544 5555555566789999999999999999999999999999999864
No 40
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=93.25 E-value=0.46 Score=41.21 Aligned_cols=127 Identities=10% Similarity=0.101 Sum_probs=90.6
Q ss_pred CCChhhhHHHHHHHHH-HH---------hCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLES-VE---------TNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~-~~---------~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
|+|+++|..|=..|.. +. ...|.+..|++++.+. +..+|..|+-.|.|..... ++.
T Consensus 23 s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~------------~~~ 88 (252)
T 4db8_A 23 SDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGG------------NEQ 88 (252)
T ss_dssp SSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCS--CHHHHHHHHHHHHHHTTSC------------HHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCC--CHHHHHHHHHHHHHHhcCC------------HHH
Confidence 3455788888887743 22 1357888898988775 4899999999999987532 222
Q ss_pred HHHH-----HHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCC----CChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 116 REAI-----KGLILHLMLTSPEAIQKQLSDATAIIGKSDFPD----KWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 116 K~~I-----K~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~----~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
+..+ -..|+..|.+.+..+|...+.++..|+..+-.. .=.+.++.|++.+++++......++.+|..++..
T Consensus 89 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~ 168 (252)
T 4db8_A 89 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG 168 (252)
T ss_dssp HHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcC
Confidence 2222 234555555667889999999999997542111 0125789999999999999999999999999975
No 41
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=93.12 E-value=1.5 Score=39.10 Aligned_cols=148 Identities=11% Similarity=0.050 Sum_probs=101.0
Q ss_pred hhhHHHHHHhhcccCCCCChhhhHHHHHHHHHHHh--C-CChH-HHHHH---HH-Hh-CCCChHHHHHHHHHHhcccccc
Q psy9795 30 NGEFFCSTQGVPNHDKNIQLESRSPTENFLESVET--N-QNYP-LLILT---LV-ER-ADVDMTIRIAGAVAFKNYVKRN 100 (337)
Q Consensus 30 ~~~~~~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~--~-pgf~-~~Ll~---i~-~~-~~~~~~iRq~AaI~LKN~V~~~ 100 (337)
+.++...+...+. .++|..+|..|=.-|.++.. . ++|. .+.-. .+ .. .+-...||-.|.-.+.+.+..-
T Consensus 58 ~~~~~~~L~~~l~--~D~n~~v~~~A~~al~~la~~l~~~~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~ 135 (249)
T 2qk1_A 58 YSNLLGIYGHIIQ--KDANIQAVALAAQSVELICDKLKTPGFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYY 135 (249)
T ss_dssp CHHHHHHHHHHHH--HCSCHHHHHHHHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHc
Confidence 4566666666663 23456788888888877554 4 5554 44322 22 21 2334788888888888887753
Q ss_pred CcccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCC---C----CC-hHHHHHHHHhhCCCCHHH
Q psy9795 101 WPLVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFP---D----KW-PSLITDMVAKFGTGDFHI 172 (337)
Q Consensus 101 W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP---~----~W-PeLl~~L~~~l~s~d~~~ 172 (337)
=. ......+ ..+=+.|+..|.+....+|.+...+|..++..- + . .- |+++|.+.+++..++...
T Consensus 136 ~~--~~~~~~l-----~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~-~~~~~~l~~~l~~~iip~l~~~l~D~~~~V 207 (249)
T 2qk1_A 136 DP--LASSGRN-----EDMLKDILEHMKHKTPQIRMECTQLFNASMKEE-KDGYSTLQRYLKDEVVPIVIQIVNDTQPAI 207 (249)
T ss_dssp CT--TCTTCTT-----HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHC-CSCSHHHHHHHTTTHHHHHHHHHTCSSHHH
T ss_pred cc--cccCCcH-----HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHc-CCcchhHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 10 0000012 346667888888777899999999999998652 2 1 35 899999999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q psy9795 173 INGVLHTAHSLFKRY 187 (337)
Q Consensus 173 ~~~aL~~L~~i~k~y 187 (337)
+..|..|+..+++..
T Consensus 208 R~aA~~~l~~i~~~v 222 (249)
T 2qk1_A 208 RTIGFESFAILIKIF 222 (249)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 42
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=92.56 E-value=1.9 Score=43.45 Aligned_cols=134 Identities=9% Similarity=0.019 Sum_probs=94.3
Q ss_pred HHHHhhcccCCCCChhhhHHHHHHHHHHHhCC----------ChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCccc
Q psy9795 35 CSTQGVPNHDKNIQLESRSPTENFLESVETNQ----------NYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLV 104 (337)
Q Consensus 35 ~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~p----------gf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~ 104 (337)
..+...|. ++|+.+|..|-..|..+.... |.+..|++.+.+. .+..+|..|+-.|++.....
T Consensus 17 ~~Lv~lL~---~~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~-~~~~~~~~A~~~L~~Ls~~~---- 88 (644)
T 2z6h_A 17 PELTKLLN---DEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNT-NDVETARCTAGTLHNLSHHR---- 88 (644)
T ss_dssp HHHHHHHT---CSCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHTTSH----
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcC-CCHHHHHHHHHHHHHHhcCh----
Confidence 34444554 568899999999998876533 5677788887763 37889999998998765431
Q ss_pred CCCCCCCCHHHHHHH-----HHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCC----ChHHHHHHHHhhCCCCHHHHHH
Q psy9795 105 EDEPDKIHASDREAI-----KGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDK----WPSLITDMVAKFGTGDFHIING 175 (337)
Q Consensus 105 ~~~~~~i~~e~K~~I-----K~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~----WPeLl~~L~~~l~s~d~~~~~~ 175 (337)
+.|..+ -..|+..|.+.+..++...+.++..|+..+-+.. =.+.++.|++.+++++......
T Consensus 89 ---------~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~ 159 (644)
T 2z6h_A 89 ---------EGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAI 159 (644)
T ss_dssp ---------HHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHH
T ss_pred ---------hhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHH
Confidence 122222 2346666666678999999999999998752211 1468899999999888776677
Q ss_pred HHHHHHHHHh
Q psy9795 176 VLHTAHSLFK 185 (337)
Q Consensus 176 aL~~L~~i~k 185 (337)
++.+|..++.
T Consensus 160 a~~~L~~La~ 169 (644)
T 2z6h_A 160 TTDCLQILAY 169 (644)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 7778877774
No 43
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=92.52 E-value=4.8 Score=39.42 Aligned_cols=128 Identities=12% Similarity=0.101 Sum_probs=90.5
Q ss_pred CCCChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHH
Q psy9795 45 KNIQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHAS 114 (337)
Q Consensus 45 ~spD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e 114 (337)
.++|++++..|=..|..+.. ..|....|.+++.+. +..++..|+-.+.|.+... ++
T Consensus 261 ~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~--~~~v~~~a~~aL~nl~~~~------------~~ 326 (529)
T 3tpo_A 261 HHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGAT--ELPIVTPALRAIGNIVTGT------------DE 326 (529)
T ss_dssp TSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCS--CHHHHHHHHHHHHHHTTSC------------HH
T ss_pred cCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCC--ChhHHHHHHHHHHHHHccc------------hH
Confidence 35677888887766655432 457788888888764 6889999999999986431 22
Q ss_pred HHHHHHH-----HHHHHHccCCHHHHHHHHHHHHHHHhhhCCCC--C--hHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Q psy9795 115 DREAIKG-----LILHLMLTSPEAIQKQLSDATAIIGKSDFPDK--W--PSLITDMVAKFGTGDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 115 ~K~~IK~-----~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~--W--PeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k 185 (337)
.+..+-+ .|+..|.+.+..+|...+.+++.|+...-... . .++++.++..+.+++......|..+|..++.
T Consensus 327 ~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~ 406 (529)
T 3tpo_A 327 QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTS 406 (529)
T ss_dssp HHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 2322222 35556666678899999999999986421100 0 2588999999999999888889999988876
Q ss_pred h
Q psy9795 186 R 186 (337)
Q Consensus 186 ~ 186 (337)
.
T Consensus 407 ~ 407 (529)
T 3tpo_A 407 G 407 (529)
T ss_dssp H
T ss_pred C
Confidence 4
No 44
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=92.43 E-value=0.59 Score=45.77 Aligned_cols=131 Identities=11% Similarity=0.028 Sum_probs=95.9
Q ss_pred CCChhhhHHHHHHHHHHHhC----------CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVETN----------QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~~----------pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
++++.+|.+|=..|..+... .|.+..|++++.+ .+..+|..|+-.|.|.....-. ......
T Consensus 184 ~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~--~~~~v~~~a~~~L~~L~~~~~~-------~~~~~~ 254 (530)
T 1wa5_B 184 TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNS--NKPSLIRTATWTLSNLCRGKKP-------QPDWSV 254 (530)
T ss_dssp HCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGS--CCHHHHHHHHHHHHHHHCCSSS-------CCCHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhCCCCC-------CCcHHH
Confidence 36789999998888877543 4778888888876 4789999999999998754211 122222
Q ss_pred HHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCC-----ChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 116 REAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDK-----WPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 116 K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~-----WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
...+=..|+..+.+.+..++...+.++..++... |+. ..++++.|++++.+++......++.+|..++..
T Consensus 255 ~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~-~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~ 329 (530)
T 1wa5_B 255 VSQALPTLAKLIYSMDTETLVDACWAISYLSDGP-QEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTG 329 (530)
T ss_dssp HGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSC-HHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTS
T ss_pred HHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCC-HHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcC
Confidence 2334456667776677899999999999998542 111 136789999999988888889999999998864
No 45
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=92.25 E-value=0.62 Score=45.49 Aligned_cols=131 Identities=15% Similarity=0.155 Sum_probs=96.0
Q ss_pred CCChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
+++..+|..|=..|..+.. ..|.+..|+.++.+. .+..+|..|+-.+.|..... ++..
T Consensus 297 ~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~-~~~~v~~~A~~~L~nl~~~~-----------~~~~ 364 (528)
T 4b8j_A 297 HPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQN-LKKSIKKEACWTISNITAGN-----------KDQI 364 (528)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSC-CCHHHHHHHHHHHHHHHTSC-----------HHHH
T ss_pred CCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCC-CcHHHHHHHHHHHHHHHCCC-----------HHHH
Confidence 4467888888888766543 367788899998764 26899999999999987421 0122
Q ss_pred HHHHH----HHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCCh-----HHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 116 REAIK----GLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWP-----SLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 116 K~~IK----~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WP-----eLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
+..+. ..|+..|.+.+..+|...+.++..++...-|+.-. +.++.|+.++.++|...+..++.+|..+++.
T Consensus 365 ~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~i~~L~~lL~~~d~~v~~~al~~L~~l~~~ 444 (528)
T 4b8j_A 365 QAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENILKV 444 (528)
T ss_dssp HHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 22233 34566666677899999999999999873232222 4688899999999999999999999999987
Q ss_pred hh
Q psy9795 187 YR 188 (337)
Q Consensus 187 yr 188 (337)
..
T Consensus 445 ~~ 446 (528)
T 4b8j_A 445 GE 446 (528)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 46
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=92.10 E-value=2.5 Score=41.09 Aligned_cols=123 Identities=8% Similarity=0.082 Sum_probs=91.7
Q ss_pred hhhhHHHHHHHHHHHhC----------CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHH
Q psy9795 49 LESRSPTENFLESVETN----------QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREA 118 (337)
Q Consensus 49 ~~~Rk~AE~~L~~~~~~----------pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~ 118 (337)
+.+|.+|=..|..+... .|.+..|+.++.++ +..+|..|+-.|.|..... ++.|..
T Consensus 132 ~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~--~~~v~~~a~~aL~~l~~~~------------~~~~~~ 197 (528)
T 4b8j_A 132 PQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSS--SDDVREQAVWALGNVAGDS------------PKCRDL 197 (528)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHTC------------HHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCC--CHHHHHHHHHHHHHHhCCC------------hhhHHH
Confidence 78888888888776553 36788888888763 6899999999999986321 233333
Q ss_pred HHH-----HHHHHHc-cCCHHHHHHHHHHHHHHHhhhCCC-C---ChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 119 IKG-----LILHLML-TSPEAIQKQLSDATAIIGKSDFPD-K---WPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 119 IK~-----~Ll~~L~-~~~~~Ir~ql~~~i~~Ia~~DfP~-~---WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
+.+ .|+..|. ..+..++...+.+++.++... |. . -.+.++.|+..+.++|...+..++.+|..++..
T Consensus 198 i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~-~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~ 274 (528)
T 4b8j_A 198 VLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGK-PQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDG 274 (528)
T ss_dssp HHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSS-SCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSS
T ss_pred HHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCC-CCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcC
Confidence 332 3455552 345789999999999999875 42 2 256899999999999999999999999988854
No 47
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=91.98 E-value=0.65 Score=45.49 Aligned_cols=129 Identities=14% Similarity=0.106 Sum_probs=93.9
Q ss_pred CCChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
++|..+|..|=..|..+.. ..|.+..|+.++.+. +..+|..|+-.+.|.....- +..
T Consensus 310 ~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~--~~~vr~~A~~aL~~l~~~~~-----------~~~ 376 (530)
T 1wa5_B 310 HESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP--KENIKKEACWTISNITAGNT-----------EQI 376 (530)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSCH-----------HHH
T ss_pred CCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCC--CHHHHHHHHHHHHHHHcCCH-----------HHH
Confidence 4677889888777766643 257888888888764 68999999999999864211 112
Q ss_pred HHHHH----HHHHHHHccCCHHHHHHHHHHHHHHHhhhCC--CCC-----hHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q psy9795 116 REAIK----GLILHLMLTSPEAIQKQLSDATAIIGKSDFP--DKW-----PSLITDMVAKFGTGDFHIINGVLHTAHSLF 184 (337)
Q Consensus 116 K~~IK----~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP--~~W-----PeLl~~L~~~l~s~d~~~~~~aL~~L~~i~ 184 (337)
+..+. ..|+..|.+.+..+|...+.++..++...-| +.- .+.++.|+..+.++|...+..++.+|..++
T Consensus 377 ~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~v~~~al~aL~~l~ 456 (530)
T 1wa5_B 377 QAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENIL 456 (530)
T ss_dssp HHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 22222 3456666666789999999999999876322 110 237888999999889999999999999999
Q ss_pred hhh
Q psy9795 185 KRY 187 (337)
Q Consensus 185 k~y 187 (337)
+..
T Consensus 457 ~~~ 459 (530)
T 1wa5_B 457 KMG 459 (530)
T ss_dssp HHH
T ss_pred Hhh
Confidence 865
No 48
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=91.91 E-value=2.3 Score=40.92 Aligned_cols=134 Identities=8% Similarity=-0.002 Sum_probs=93.9
Q ss_pred HHHHhhcccCCCCChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCccc
Q psy9795 35 CSTQGVPNHDKNIQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLV 104 (337)
Q Consensus 35 ~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~ 104 (337)
..+...|. ++|+.+|..|-..|..+.. .+|....|++.+.+. .+..+|..|+-.|++....
T Consensus 20 ~~Lv~lL~---~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~-~~~~~~~~a~~~L~~ls~~----- 90 (529)
T 1jdh_A 20 PELTKLLN---DEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNT-NDVETARCTAGTLHNLSHH----- 90 (529)
T ss_dssp HHHHHHHT---CSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTTS-----
T ss_pred HHHHHHhC---CCCHHHHHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcC-CCHHHHHHHHHHHHHHHcC-----
Confidence 34444554 5688999999988877643 346788888888764 3788999999999986432
Q ss_pred CCCCCCCCHHHHHHHH-----HHHHHHHccCCHHHHHHHHHHHHHHHhhhCCC-C---ChHHHHHHHHhhCCCCHHHHHH
Q psy9795 105 EDEPDKIHASDREAIK-----GLILHLMLTSPEAIQKQLSDATAIIGKSDFPD-K---WPSLITDMVAKFGTGDFHIING 175 (337)
Q Consensus 105 ~~~~~~i~~e~K~~IK-----~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~-~---WPeLl~~L~~~l~s~d~~~~~~ 175 (337)
++.|..+. ..|++.+.+.+..++...+.++..++..+-.. . =.+.++.+++.+.+++......
T Consensus 91 --------~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~ 162 (529)
T 1jdh_A 91 --------REGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAI 162 (529)
T ss_dssp --------HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHH
T ss_pred --------chhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHH
Confidence 22233322 25566666667889999999999999874211 0 1467899999999888777777
Q ss_pred HHHHHHHHHh
Q psy9795 176 VLHTAHSLFK 185 (337)
Q Consensus 176 aL~~L~~i~k 185 (337)
+..+|..++.
T Consensus 163 ~~~~L~~la~ 172 (529)
T 1jdh_A 163 TTDCLQILAY 172 (529)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 7777776664
No 49
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=91.65 E-value=0.12 Score=41.08 Aligned_cols=118 Identities=14% Similarity=0.046 Sum_probs=77.9
Q ss_pred HHHHHHhhcccCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCC
Q psy9795 33 FFCSTQGVPNHDKNIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIH 112 (337)
Q Consensus 33 ~~~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~ 112 (337)
+...+...|. ++|+.+|..|-..|..+.. +. ...|+..+.+ .+..+|..|+..|-+.-.
T Consensus 13 ~~~~l~~~L~---~~~~~vR~~A~~~L~~~~~-~~-~~~L~~~L~d--~~~~vR~~A~~aL~~~~~-------------- 71 (131)
T 1te4_A 13 GLVPRGSHMA---DENKWVRRDVSTALSRMGD-EA-FEPLLESLSN--EDWRIRGAAAWIIGNFQD-------------- 71 (131)
T ss_dssp --------CC---SSCCCSSSSCCSSTTSCSS-TT-HHHHHHGGGC--SCHHHHHHHHHHHGGGCS--------------
T ss_pred cHHHHHHHhc---CCCHHHHHHHHHHHHHhCc-hH-HHHHHHHHcC--CCHHHHHHHHHHHHhcCC--------------
Confidence 4444444443 4677888888777765533 33 4777777765 378999999988866421
Q ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy9795 113 ASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHS 182 (337)
Q Consensus 113 ~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~ 182 (337)
...-..|+..+.+.+..||...+.++..+. -++.++.|...++++|......+..+|..
T Consensus 72 ----~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~-------~~~a~~~L~~~l~d~~~~vr~~A~~aL~~ 130 (131)
T 1te4_A 72 ----ERAVEPLIKLLEDDSGFVRSGAARSLEQIG-------GERVRAAMEKLAETGTGFARKVAVNYLET 130 (131)
T ss_dssp ----HHHHHHHHHHHHHCCTHHHHHHHHHHHHHC-------SHHHHHHHHHHTTSCCTHHHHHHHHHGGG
T ss_pred ----HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC-------cHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 123455667777778899999999998885 25688888898887777777777766643
No 50
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=91.08 E-value=1 Score=45.59 Aligned_cols=69 Identities=10% Similarity=0.163 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 117 EAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 117 ~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
+.+-..+..++.+.++.||+..+.++..|.+.+ |+.=+++++.+..++.+.|+..+.+|+.+|.++++.
T Consensus 141 ~~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~-p~~v~~~~~~l~~lL~D~d~~V~~~Al~~L~~i~~~ 209 (618)
T 1w63_A 141 RDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKV-PELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCER 209 (618)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHC-GGGGGGGGGGTTTSTTCCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHC-hHHHHHHHHHHHHHhCCCCHhHHHHHHHHHHHHHHh
Confidence 344556666777778899999999999999863 654456777777888888888899999999999865
No 51
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=90.97 E-value=5 Score=36.69 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=84.5
Q ss_pred hhhHHHHHHHHHHHhC---------CChHHHHHH-HHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHH-
Q psy9795 50 ESRSPTENFLESVETN---------QNYPLLILT-LVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREA- 118 (337)
Q Consensus 50 ~~Rk~AE~~L~~~~~~---------pgf~~~Ll~-i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~- 118 (337)
+.|..|=..|.++-.+ -|-+..|+. ++.++ +..+|..|+-.+-|.+..+ ++.|..
T Consensus 55 e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~--~~~vr~~Aa~~Lg~ia~~n------------~~~~~~v 120 (296)
T 1xqr_A 55 QEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAG--AAGLRWRAAQLIGTCSQNV------------AAIQEQV 120 (296)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCS--SHHHHHHHHHHHHHHHTTC------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCC--CHHHHHHHHHHHHHHHhCC------------HHHHHHH
Confidence 4455555555544322 355677777 77653 6899999999999887532 223322
Q ss_pred HH----HHHHHHHccC-CHHHHHHHHHHHHHHHhhhCCC--CC--hHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 119 IK----GLILHLMLTS-PEAIQKQLSDATAIIGKSDFPD--KW--PSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 119 IK----~~Ll~~L~~~-~~~Ir~ql~~~i~~Ia~~DfP~--~W--PeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
++ ..|+..|.+. +..+|...+.+|+.|++..=|. .. -+.++.|+.+++++|......+..+|..++..
T Consensus 121 v~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~ 197 (296)
T 1xqr_A 121 LGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVG 197 (296)
T ss_dssp HHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 22 2455566543 5789999999999998743221 11 25788999999999999899999999999985
No 52
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=90.85 E-value=1.1 Score=46.76 Aligned_cols=132 Identities=6% Similarity=0.010 Sum_probs=93.2
Q ss_pred HHhhcccCCCCChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCC
Q psy9795 37 TQGVPNHDKNIQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVED 106 (337)
Q Consensus 37 l~~tL~~~~spD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~ 106 (337)
+...|. ++|+.+|..|-..|..+.. .+|.+..|++.+.+.. +..+|..|+-.|+|.....
T Consensus 155 Lv~lL~---~~d~~vr~~A~~~L~~L~~~~~~~~~i~~~~~~i~~Lv~~L~~~~-d~~vr~~Aa~aL~~Ls~~~------ 224 (780)
T 2z6g_A 155 LTKLLN---DEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTN-DVETARCTSGTLHNLSHHR------ 224 (780)
T ss_dssp HHHHHH---CSCHHHHHHHHHHHHHHHTSHHHHHHHTTCHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHTSH------
T ss_pred HHHHHC---CCCHHHHHHHHHHHHHHhCCChhHHHHHhccChHHHHHHHHcCCC-CHHHHHHHHHHHHHHhCCc------
Confidence 334454 5688999999998887764 3578889999987653 7899999999999853321
Q ss_pred CCCCCCHHHHHHH----HHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCC-----hHHHHHHHHhhCCCCHHHHHHHH
Q psy9795 107 EPDKIHASDREAI----KGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKW-----PSLITDMVAKFGTGDFHIINGVL 177 (337)
Q Consensus 107 ~~~~i~~e~K~~I----K~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~W-----PeLl~~L~~~l~s~d~~~~~~aL 177 (337)
+..+..+ =..|++.|.+.+..+|...+.++..|+.... +.. .+.++.++..+.+++......++
T Consensus 225 ------~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~-~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~ 297 (780)
T 2z6g_A 225 ------EGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQE-GAKMAVRLAGGLQKMVALLNKTNVKFLAITT 297 (780)
T ss_dssp ------HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHST-THHHHHHHTTHHHHHHHGGGCCCHHHHHHHH
T ss_pred ------hhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCh-hhHHHHHHcCCHHHHHHHHhcCCHHHHHHHH
Confidence 1111222 2345666666678899999999999997642 211 35788999999988877677777
Q ss_pred HHHHHHHh
Q psy9795 178 HTAHSLFK 185 (337)
Q Consensus 178 ~~L~~i~k 185 (337)
.+|..++.
T Consensus 298 ~aL~~La~ 305 (780)
T 2z6g_A 298 DCLQILAY 305 (780)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 77776653
No 53
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=90.29 E-value=1.6 Score=44.25 Aligned_cols=69 Identities=13% Similarity=0.238 Sum_probs=55.1
Q ss_pred HHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHhhhCCCCCh--HHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 117 EAIKGLILHLM--LTSPEAIQKQLSDATAIIGKSDFPDKWP--SLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 117 ~~IK~~Ll~~L--~~~~~~Ir~ql~~~i~~Ia~~DfP~~WP--eLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
+.+-..+..++ .+.++.||+..+.++..|.+.+ |+.=+ ++++.+..++.+.|+..+.+|+.++.+++++
T Consensus 145 ~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~-p~~~~~~~~~~~l~~lL~d~d~~V~~~a~~~l~~i~~~ 217 (621)
T 2vgl_A 145 EAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTS-PDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 217 (621)
T ss_dssp HHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHC-GGGCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhC-hhhcCchhHHHHHHHHhCCCCccHHHHHHHHHHHHHHh
Confidence 44555667777 5667899999999999999954 65444 6677778888888999999999999999875
No 54
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=88.93 E-value=1.3 Score=44.86 Aligned_cols=122 Identities=7% Similarity=0.065 Sum_probs=80.9
Q ss_pred hhhhHHHHHHHHHHHhCCC----hHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHH
Q psy9795 49 LESRSPTENFLESVETNQN----YPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLIL 124 (337)
Q Consensus 49 ~~~Rk~AE~~L~~~~~~pg----f~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll 124 (337)
..++-+|-..+-.+...|+ ....|...+.+ .+.++|.+|.-.+...+..+- +.-......++
T Consensus 291 ~aV~~ea~~~i~~l~~~~~l~~~a~~~L~~~L~~--~d~~vr~~aL~~L~~i~~~~p------------~~~~~~~~~i~ 356 (618)
T 1w63_A 291 NAILYETVLTIMDIKSESGLRVLAINILGRFLLN--NDKNIRYVALTSLLKTVQTDH------------NAVQRHRSTIV 356 (618)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTC--SSTTTHHHHHHHHHHHHHHHH------------HHHGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhC--CCCchHHHHHHHHHHHHhhCH------------HHHHHHHHHHH
Confidence 3445454444444333222 23444444444 256888888777776665421 11112344677
Q ss_pred HHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhh
Q psy9795 125 HLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 125 ~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~y 187 (337)
.++.+.+..||....+++..++.. .++.++++++...+.+.|.+.+..+...+..++.+|
T Consensus 357 ~~l~d~d~~Ir~~alelL~~l~~~---~nv~~iv~eL~~~l~~~d~e~r~~~v~~I~~la~k~ 416 (618)
T 1w63_A 357 DCLKDLDVSIKRRAMELSFALVNG---NNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKY 416 (618)
T ss_dssp HGGGSSCHHHHHHHHHHHHHHCCS---SSTHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHSS
T ss_pred HHccCCChhHHHHHHHHHHHHccc---ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 777777888998888888888875 468889999999888888888888888888888876
No 55
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=88.59 E-value=2.4 Score=41.67 Aligned_cols=128 Identities=12% Similarity=0.149 Sum_probs=91.0
Q ss_pred CCChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
+++..++..|-..|..+.. ..|.+..|..++.+. +..+|..|+-.|-|..... ++.
T Consensus 304 ~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~--~~~i~~~a~~aL~nl~~~~------------~~~ 369 (529)
T 3tpo_A 304 ATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP--KTNIQKEATWTMSNITAGR------------QDQ 369 (529)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCS--SHHHHHHHHHHHHHHHTSC------------HHH
T ss_pred CCChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHcCC--CHHHHHHHHHHHHHHhccc------------HHH
Confidence 4577888888777766532 246677787877653 6889999999998876431 222
Q ss_pred HHHHH-----HHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCC-----hHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Q psy9795 116 REAIK-----GLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKW-----PSLITDMVAKFGTGDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 116 K~~IK-----~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~W-----PeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k 185 (337)
+..+. ..|+..+.+.+..+|...+.+|..++...-++.- .+.++.|+.++.++|...+..+|.+|..|++
T Consensus 370 ~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i~~L~~LL~~~d~~i~~~~L~aL~nil~ 449 (529)
T 3tpo_A 370 IQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQ 449 (529)
T ss_dssp HHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 22222 3455666667788999999999998865322211 1357889999999999999999999999987
Q ss_pred hh
Q psy9795 186 RY 187 (337)
Q Consensus 186 ~y 187 (337)
-.
T Consensus 450 ~~ 451 (529)
T 3tpo_A 450 AA 451 (529)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 56
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=88.50 E-value=22 Score=37.40 Aligned_cols=95 Identities=5% Similarity=0.044 Sum_probs=66.1
Q ss_pred ChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhh---------h---
Q psy9795 82 DMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKS---------D--- 149 (337)
Q Consensus 82 ~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~---------D--- 149 (337)
.+.+|..|+-.+-++.. | ++++.-..+=..++..|.+++..||...|.++..++.. +
T Consensus 471 ~p~vr~~a~~~lg~~~~--~---------~~~~~l~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~~~~~~~~~~ 539 (960)
T 1wa5_C 471 HIILRVDAIKYIYTFRN--Q---------LTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHK 539 (960)
T ss_dssp CHHHHHHHHHHHHHTGG--G---------SCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCG
T ss_pred CceehHHHHHHHHHHHh--h---------CCHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHhcccccccccccccH
Confidence 67888888877766542 3 23343344445666777666788999999999998874 1
Q ss_pred --CCCCChHHHHHHHHhhCCCC-----HHHHHHHHHHHHHHHhhh
Q psy9795 150 --FPDKWPSLITDMVAKFGTGD-----FHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 150 --fP~~WPeLl~~L~~~l~s~d-----~~~~~~aL~~L~~i~k~y 187 (337)
.....+.+++.+++.++... ......++.++..++..+
T Consensus 540 ~~l~p~l~~ll~~L~~ll~~~~~~~~~~~~~e~l~~al~~vv~~~ 584 (960)
T 1wa5_C 540 EDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTS 584 (960)
T ss_dssp GGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHhhhhHHHHHHHHHHHHHhccCCCCcccccHHHHHHHHHHHHHH
Confidence 22467899999999887641 113467888888888876
No 57
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=88.35 E-value=3.1 Score=40.70 Aligned_cols=129 Identities=12% Similarity=0.144 Sum_probs=88.6
Q ss_pred CCChhhhHHHHHHHHHHHhC----------CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVETN----------QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~~----------pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
+++..++..|-..|..+... .|....|..++.+ .+..+|..|+-.+.|..... ++.
T Consensus 285 ~~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~--~~~~v~~~A~~aL~nl~a~~------------~~~ 350 (510)
T 3ul1_B 285 ATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTN--PKTNIQKEATWTMSNITAGR------------QDQ 350 (510)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-CTTC--SSHHHHHHHHHHHHHHTTSC------------HHH
T ss_pred CCChhhhhHHHHHHHHhhcCCHHHHHHHhhccchHHHHHHhcC--CCHHHHHHHHHHHHHHHcCc------------HHH
Confidence 45678888887777665332 3444555555544 36789999999999886431 222
Q ss_pred HHHHH-----HHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCC-----hHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Q psy9795 116 REAIK-----GLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKW-----PSLITDMVAKFGTGDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 116 K~~IK-----~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~W-----PeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k 185 (337)
+..+. ..|+..+.+.+..+|...+.+|..++...-++.- .+.++.|++++.++|...+..+|.+|..|++
T Consensus 351 ~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~~~d~~i~~~~L~aL~nil~ 430 (510)
T 3ul1_B 351 IQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQ 430 (510)
T ss_dssp HHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 33322 2455666667789999999999998875322111 1457889999999999999999999999998
Q ss_pred hhh
Q psy9795 186 RYR 188 (337)
Q Consensus 186 ~yr 188 (337)
..+
T Consensus 431 ~~~ 433 (510)
T 3ul1_B 431 AAE 433 (510)
T ss_dssp HHH
T ss_pred HhH
Confidence 643
No 58
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=85.54 E-value=21 Score=33.90 Aligned_cols=127 Identities=8% Similarity=0.083 Sum_probs=86.7
Q ss_pred CCChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
+++..+|..+-..|..+.. ..|....|++++.+.+ +...+..|+-.++|.... ++.
T Consensus 154 ~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~~-~~~~~~~a~~~L~~l~~~-------------~~~ 219 (529)
T 1jdh_A 154 KTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYT-YEKLLWTTSRVLKVLSVC-------------SSN 219 (529)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTTS-------------TTH
T ss_pred cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhCC-hHHHHHHHHHHHHHHhcC-------------ccc
Confidence 3566777777556654432 2477888889888753 556666666677777521 112
Q ss_pred H-HHHHHHHHHHHc----cCCHHHHHHHHHHHHHHHhhhCC-CCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 116 R-EAIKGLILHLML----TSPEAIQKQLSDATAIIGKSDFP-DKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 116 K-~~IK~~Ll~~L~----~~~~~Ir~ql~~~i~~Ia~~DfP-~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
| ..++...++.|. +.+..++...+.++..++...-+ ..-.+.++.+++.+.++|......+..+|..++..
T Consensus 220 ~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~ 296 (529)
T 1jdh_A 220 KPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCN 296 (529)
T ss_dssp HHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcCChhhHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcC
Confidence 2 223334444444 44578888899999999876422 23357999999999999999999999999999774
No 59
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=85.49 E-value=36 Score=35.62 Aligned_cols=111 Identities=11% Similarity=-0.000 Sum_probs=77.9
Q ss_pred CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Q psy9795 66 QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAII 145 (337)
Q Consensus 66 pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~I 145 (337)
.|.+..|.+++.+. +..+|..|+-.+-|.+...=... ..+ + ....+ ..|+..+.+.+..+|...+.+++.|
T Consensus 622 aG~l~~Lv~LL~s~--~~~Vq~~A~~~L~NLa~~~~~~~----~~v-~-~~g~l-~~Lv~LL~s~d~~vq~~Aa~ALanL 692 (810)
T 3now_A 622 EQGVSKIEYYLMED--HLYLTRAAAQCLCNLVMSEDVIK----MFE-G-NNDRV-KFLALLCEDEDEETATACAGALAII 692 (810)
T ss_dssp TTHHHHHHHHHHSC--CTTHHHHHHHHHHHHTTSHHHHH----HHH-S-SSSHH-HHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhCChHHHH----HHH-h-ccCcH-HHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 47888898888764 56899999999999875310000 000 0 00112 2455555556688999999999999
Q ss_pred Hhh-h-----CCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 146 GKS-D-----FPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 146 a~~-D-----fP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
+.. + ..+. ...++.|++++.++|....+.|+.++..++..
T Consensus 693 t~~s~~~~~~ii~~-~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~ 738 (810)
T 3now_A 693 TSVSVKCCEKILAI-ASWLDILHTLIANPSPAVQHRGIVIILNMINA 738 (810)
T ss_dssp HHHCHHHHHHHHTS-TTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTT
T ss_pred hCCCHHHHHHHHHH-cCCHHHHHHHHCCCCHHHHHHHHHHHHHHHhC
Confidence 872 1 1222 46788999999999999999999999999873
No 60
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=84.76 E-value=10 Score=36.36 Aligned_cols=126 Identities=13% Similarity=0.105 Sum_probs=87.6
Q ss_pred CChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHH
Q psy9795 47 IQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDR 116 (337)
Q Consensus 47 pD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K 116 (337)
+|+..+..|-..|..+.. ..|.+..|++++.++ +..++..|+-.|+|.... +++.|
T Consensus 14 ~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~--~~~~~~~A~~aL~nLa~~------------~~~~k 79 (457)
T 1xm9_A 14 QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP--NQNVQQAAAGALRNLVFR------------STTNK 79 (457)
T ss_dssp SCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSS--CHHHHHHHHHHHHHHHSS------------CHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhcC------------CHHHH
Confidence 355677777666666532 246678888888763 678999999999998652 25666
Q ss_pred HHHHH-----HHHHHHc-cCCHHHHHHHHHHHHHHHhhhCCC--CChHHHHHHHHhhC--------CC--------CHHH
Q psy9795 117 EAIKG-----LILHLML-TSPEAIQKQLSDATAIIGKSDFPD--KWPSLITDMVAKFG--------TG--------DFHI 172 (337)
Q Consensus 117 ~~IK~-----~Ll~~L~-~~~~~Ir~ql~~~i~~Ia~~DfP~--~WPeLl~~L~~~l~--------s~--------d~~~ 172 (337)
..|.+ .|++.|. +.+..++.+.+.++..|+..+-.. --.+.+|.|++++. ++ +...
T Consensus 80 ~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v 159 (457)
T 1xm9_A 80 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 159 (457)
T ss_dssp HHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHHHHHHHHHHHTTHHHHTCC---------CCCHHH
T ss_pred HHHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHHhccHHHHHHHHhccccccccCccchhcccccHHH
Confidence 66654 5777777 556889999999999999873221 01167888999882 22 3344
Q ss_pred HHHHHHHHHHHHhh
Q psy9795 173 INGVLHTAHSLFKR 186 (337)
Q Consensus 173 ~~~aL~~L~~i~k~ 186 (337)
...+..+|..++..
T Consensus 160 ~~~a~~aL~nLs~~ 173 (457)
T 1xm9_A 160 FFNATGCLRNLSSA 173 (457)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHccC
Confidence 56888999988874
No 61
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=84.29 E-value=20 Score=36.02 Aligned_cols=131 Identities=11% Similarity=0.023 Sum_probs=85.8
Q ss_pred cccCCCCChhhhHHHHHHHHHHH--hC--CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHH
Q psy9795 41 PNHDKNIQLESRSPTENFLESVE--TN--QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDR 116 (337)
Q Consensus 41 L~~~~spD~~~Rk~AE~~L~~~~--~~--pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K 116 (337)
+.++.+.|...|+.+=..|--+. +. .......+..++++ +...|.++-+++.++.+.+ ++.-
T Consensus 44 ~~~~~~~~~~~k~~~l~Kli~l~~~G~d~s~~~~~vvkl~~s~--~~~~Krl~YL~l~~~~~~~------------~e~~ 109 (621)
T 2vgl_A 44 FKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSN--RYTEKQIGYLFISVLVNSN------------SELI 109 (621)
T ss_dssp HHSSSCCCHHHHHHHHHHHHHHHHHSCCCCSCHHHHHHGGGCS--CHHHHHHHHHHHHHSCCCC------------HHHH
T ss_pred HhcCCCCCHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHhcCC--CHHHHHHHHHHHHHHccCC------------cHHH
Confidence 34333346666666655554322 22 22233344555543 7899999999999887442 2322
Q ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhh--CCCCHHHHHHHHHHHHHHHhhhh
Q psy9795 117 EAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKF--GTGDFHIINGVLHTAHSLFKRYR 188 (337)
Q Consensus 117 ~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l--~s~d~~~~~~aL~~L~~i~k~yr 188 (337)
-.+=+.+..-+.++++.+|.....+++.|.. |+--+.+++.+.+++ .+.++.....|..|+..+++.+.
T Consensus 110 ~L~iN~l~kDl~~~n~~ir~lALr~L~~i~~---~e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p 180 (621)
T 2vgl_A 110 RLINNAIKNDLASRNPTFMGLALHCIANVGS---REMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSP 180 (621)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHHHHCC---HHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHhhccCC---HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCh
Confidence 3344555566666777887766666666654 345678999999999 77788888999999999999764
No 62
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=83.81 E-value=9.4 Score=37.20 Aligned_cols=135 Identities=10% Similarity=0.082 Sum_probs=90.3
Q ss_pred CCCChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCC---ChHHHHHHHHHHhccccccCcccCCCCCCC
Q psy9795 45 KNIQLESRSPTENFLESVET----------NQNYPLLILTLVERADV---DMTIRIAGAVAFKNYVKRNWPLVEDEPDKI 111 (337)
Q Consensus 45 ~spD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~---~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i 111 (337)
.|+|..+|.+|-..|..+.. ..|....|+.++.+.+. ...+...|+-.+.|..+..-. ..
T Consensus 153 ~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~-------~~ 225 (510)
T 3ul1_B 153 ASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNP-------AP 225 (510)
T ss_dssp TCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSS-------CC
T ss_pred cCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHHhccchhhhHHHHHHHHHHHHHHhhcccc-------hh
Confidence 46888999999888877643 24677788888765432 234444555566666543211 22
Q ss_pred CHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCC----CChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 112 HASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPD----KWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 112 ~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~----~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
.-..-..+-..|+..+.+.+..++...+.+++.++...-.. .-..+++.|++++.+++......++.+|..++..
T Consensus 226 ~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~ 304 (510)
T 3ul1_B 226 PLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTG 304 (510)
T ss_dssp CHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcC
Confidence 22222334445666676777889999999999998542100 1235789999999999999899999999988653
No 63
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=82.83 E-value=33 Score=34.48 Aligned_cols=107 Identities=19% Similarity=0.233 Sum_probs=77.6
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHH-----HHHHHHHHccCCHHHHHHHHHHHH
Q psy9795 69 PLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAI-----KGLILHLMLTSPEAIQKQLSDATA 143 (337)
Q Consensus 69 ~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~I-----K~~Ll~~L~~~~~~Ir~ql~~~i~ 143 (337)
+..|+.++.+.. ...++-.|+-.|.|.....|.. +...+..| -..|+..|.+.+..++...+.+|+
T Consensus 310 v~~Ll~LL~~s~-~~~v~E~Aa~AL~nL~ag~~~~--------~~~~~~~v~~~~glp~Lv~LL~s~~~~v~~~A~~aL~ 380 (584)
T 3l6x_A 310 VRIYISLLKESK-TPAILEASAGAIQNLCAGRWTY--------GRYIRSALRQEKALSAIADLLTNEHERVVKAASGALR 380 (584)
T ss_dssp HHHHHHHHHHCC-CHHHHHHHHHHHHHHHSSCSHH--------HHHHHHHHTSHHHHHHHHHGGGCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCC-CHHHHHHHHHHHHHHHcCCccc--------cHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 456777876643 6889999999999998877752 12323333 334566666677889999999999
Q ss_pred HHHhhhCCCCCh----HHHHHHHHhhCCC--------CHHHHHHHHHHHHHHHhh
Q psy9795 144 IIGKSDFPDKWP----SLITDMVAKFGTG--------DFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 144 ~Ia~~DfP~~WP----eLl~~L~~~l~s~--------d~~~~~~aL~~L~~i~k~ 186 (337)
.++.. ++.+. ..++.|++++.++ +...+..++.+|+.++-.
T Consensus 381 nLs~~--~~~~~~I~~g~ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~ 433 (584)
T 3l6x_A 381 NLAVD--ARNKELIGKHAIPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAE 433 (584)
T ss_dssp HHHTT--CSCHHHHHHHHHHHHHHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTT
T ss_pred HHhCC--hhHHHHHHhCCHHHHHHHhcCCcccccccchHHHHHHHHHHHHHHhcC
Confidence 99975 45553 5689999999876 245678899999999854
No 64
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=82.47 E-value=18 Score=37.38 Aligned_cols=127 Identities=7% Similarity=0.068 Sum_probs=85.8
Q ss_pred CChhhhHHHHHHHHHHH----------hCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHH
Q psy9795 47 IQLESRSPTENFLESVE----------TNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDR 116 (337)
Q Consensus 47 pD~~~Rk~AE~~L~~~~----------~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K 116 (337)
++..+|..|-..|..+. ...|.+..|+.++.+.+ +...+..|+-.++|..... +.-.
T Consensus 288 ~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~~-~~~~~~~a~~aL~~Ls~~~------------~~~~ 354 (780)
T 2z6g_A 288 TNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYT-YEKLLWTTSRVLKVLSVCS------------SNKP 354 (780)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHTST------------THHH
T ss_pred CCHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHHHHHHHHhcCC-HHHHHHHHHHHHHHhhcCh------------HHHH
Confidence 56677777766665443 23577888888887643 4556666667777765311 1112
Q ss_pred HHHHHHHHHHHc----cCCHHHHHHHHHHHHHHHhhhCC-CCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 117 EAIKGLILHLML----TSPEAIQKQLSDATAIIGKSDFP-DKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 117 ~~IK~~Ll~~L~----~~~~~Ir~ql~~~i~~Ia~~DfP-~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
..++...+..|. +.+..++...+.++..++...-+ ..-.++++.|++.+.+++......+..+|..++..
T Consensus 355 ~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~ 429 (780)
T 2z6g_A 355 AIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCN 429 (780)
T ss_dssp HHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSS
T ss_pred HHHHhchHHHHHHHHcCCchHHHHHHHHHHHHHhccchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 333444444444 34567888889999999876522 23478999999999999998899999999988764
No 65
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=80.81 E-value=28 Score=34.74 Aligned_cols=126 Identities=9% Similarity=0.089 Sum_probs=86.5
Q ss_pred CChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHH
Q psy9795 47 IQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDR 116 (337)
Q Consensus 47 pD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K 116 (337)
++...+..|-..|..+.. ..|.+..|++++.+.. ...++..|+-.|+|.... ++.|
T Consensus 152 ~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL~~~~-~~~~~~~a~~~L~nLs~~-------------~~~~ 217 (644)
T 2z6h_A 152 TNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYT-YEKLLWTTSRVLKVLSVC-------------SSNK 217 (644)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTTCC-CHHHHHHHHHHHHHHTTC-------------TTHH
T ss_pred CCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHHHHcCC-hHHHHHHHHHHHHHHhcC-------------cccH
Confidence 345666666556655442 2477888899887753 567777777788887531 1223
Q ss_pred HH-HHHHHHHHHc----cCCHHHHHHHHHHHHHHHhhhCC-CCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 117 EA-IKGLILHLML----TSPEAIQKQLSDATAIIGKSDFP-DKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 117 ~~-IK~~Ll~~L~----~~~~~Ir~ql~~~i~~Ia~~DfP-~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
.. ++...+..|. +.+..++...+.++..+++..-+ ..-.+.++.|++.+.++|......+..+|..++..
T Consensus 218 ~~l~~~g~l~~L~~ll~~~~~~~~~~a~~~L~nL~~~~~~~~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~ 293 (644)
T 2z6h_A 218 PAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCN 293 (644)
T ss_dssp HHHHHTTHHHHHHTTTTCSCHHHHHHHHHHHHHHGGGCTTCCSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 33 3333444443 34578899999999999875322 23358999999999999998889999999988874
No 66
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=80.46 E-value=12 Score=35.24 Aligned_cols=129 Identities=7% Similarity=0.012 Sum_probs=84.8
Q ss_pred cCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHh--CCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHH
Q psy9795 43 HDKNIQLESRSPTENFLESVETNQNYPLLILTLVER--ADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIK 120 (337)
Q Consensus 43 ~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~--~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK 120 (337)
--.|+|...||-.--.++.+.+.|+-......-+.+ ++.++.+|-.|.=.|=+.... .+ -+.+-
T Consensus 76 l~~s~d~~lKrLvYLyl~~~~~~~~e~iLv~Nsl~kDl~~~N~~iR~lALRtL~~I~~~----------~m----~~~l~ 141 (355)
T 3tjz_B 76 LFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDSYRGPAVRALCQITDS----------TM----LQAIE 141 (355)
T ss_dssp GGGCCCHHHHHHHHHHHHHHTTTSSCGGGGHHHHHHHHHSSCHHHHHHHHHHHHHHCCT----------TT----HHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhhcCCCcHhHHHHHHHHHhcCCCH----------HH----HHHHH
Confidence 445778899999999999987776432222222221 123567777765555443211 22 23455
Q ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 121 GLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 121 ~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
..+-++|.+.++.||+..+-++..+...+ |+-=..+++.+.+.+.+.|+-.++.|+.+|+++.+.
T Consensus 142 ~~lk~~L~d~~pyVRk~A~l~~~kL~~~~-pe~v~~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~~ 206 (355)
T 3tjz_B 142 RYMKQAIVDKVPSVSSSALVSSLHLLKCS-FDVVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKN 206 (355)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHTTTC-HHHHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHhccC-HHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhh
Confidence 55667888888999999999988776442 321123456777777788988899999999999874
No 67
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=80.43 E-value=47 Score=32.71 Aligned_cols=98 Identities=14% Similarity=0.112 Sum_probs=66.8
Q ss_pred HHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCC
Q psy9795 74 TLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDK 153 (337)
Q Consensus 74 ~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~ 153 (337)
.|+.........+++||-.+-++.+.. | +-.+.-=+.++++.-+.+..||.|....+-.+++.+ .
T Consensus 33 ~Il~~~kg~~k~K~LaaQ~I~kffk~F-----------P-~l~~~Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~~---~ 97 (507)
T 3u0r_A 33 VILDGVKGGTKEKRLAAQFIPKFFKHF-----------P-ELADSAINAQLDLCEDEDVSIRRQAIKELPQFATGE---N 97 (507)
T ss_dssp HHHHGGGSCHHHHHHHHHHHHHHGGGC-----------G-GGHHHHHHHHHHHHTCSSHHHHHHHHHHGGGGCCTT---C
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHhhC-----------h-hhHHHHHHHHHHHHhcccHHHHHHHHHhhHHHhhhh---h
Confidence 343433447899999998877666543 1 112233356677777778899999888888888773 2
Q ss_pred ChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 154 WPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 154 WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
=+-..+.|+|++++++...+...=.+|.++++-
T Consensus 98 i~kiaDvL~QlLqtdd~~E~~~V~~sL~sllk~ 130 (507)
T 3u0r_A 98 LPRVADILTQLLQTDDSAEFNLVNNALLSIFKM 130 (507)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhccchHHHHHHHHHHHHHHhc
Confidence 468999999999998876655555555555553
No 68
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=76.52 E-value=77 Score=33.06 Aligned_cols=55 Identities=9% Similarity=0.023 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHHHHhhhC--CCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhhh
Q psy9795 131 PEAIQKQLSDATAIIGKSDF--PDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRYR 188 (337)
Q Consensus 131 ~~~Ir~ql~~~i~~Ia~~Df--P~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr 188 (337)
++.||...+.+++..+..-. |+..+.+++.++..++ +.....|-.++..+|+..+
T Consensus 519 ~~~vr~~a~~~l~~~~~~l~~~~~~l~~vl~~l~~~l~---~~v~~~A~~al~~l~~~~~ 575 (971)
T 2x1g_F 519 NVKLLGTALETMGSYCNWLMENPAYIPPAINLLVRGLN---SSMSAQATLGLKELCRDCQ 575 (971)
T ss_dssp CHHHHHHHHHHHHHTHHHHC----CHHHHHHHHHHHHH---SSCHHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHH
Confidence 67899999999999997644 5678899999998883 4456778888999998763
No 69
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=73.92 E-value=12 Score=36.05 Aligned_cols=110 Identities=10% Similarity=0.034 Sum_probs=78.9
Q ss_pred CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH-HHHHH-----HHHHHHHccCCHHHHHHHH
Q psy9795 66 QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD-REAIK-----GLILHLMLTSPEAIQKQLS 139 (337)
Q Consensus 66 pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~-K~~IK-----~~Ll~~L~~~~~~Ir~ql~ 139 (337)
+|.+..|+.++.+.. +..++-.|+-.|-|....+|.. +.+. |..|+ ..|++.|.+.+..++...+
T Consensus 282 ~~~l~~L~~lL~~~~-~~~~~e~a~~aL~nl~~~~~~~--------~~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~ 352 (457)
T 1xm9_A 282 SDAIRTYLNLMGKSK-KDATLEACAGALQNLTASKGLM--------SSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGA 352 (457)
T ss_dssp HHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTTCSSSH--------HHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHH
T ss_pred cchHHHHHHHHhhcC-CHHHHHHHHHHHHHhccCcCcc--------hHHHHHHHHHHcCCchHHHHHHhCCCHhHHHHHH
Confidence 445677888887753 6788888899999998877641 1122 33332 3677777777889999999
Q ss_pred HHHHHHHhhhCCCCC----hHHHHHHHHhhCCCCH------HHHHHHHHHHHHHHhh
Q psy9795 140 DATAIIGKSDFPDKW----PSLITDMVAKFGTGDF------HIINGVLHTAHSLFKR 186 (337)
Q Consensus 140 ~~i~~Ia~~DfP~~W----PeLl~~L~~~l~s~d~------~~~~~aL~~L~~i~k~ 186 (337)
.+++.++..+ +.+ .+.++.|++.+.+++. ..+..++.+|+.++..
T Consensus 353 ~aL~nls~~~--~~~~~i~~~~i~~Lv~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~ 407 (457)
T 1xm9_A 353 SLLSNMSRHP--LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 407 (457)
T ss_dssp HHHHHHHTSG--GGHHHHHHHTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCH--HHHHHHHHhhhHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHhc
Confidence 9999998743 333 3567889999987643 4566888889888864
No 70
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=73.81 E-value=30 Score=32.20 Aligned_cols=130 Identities=8% Similarity=0.072 Sum_probs=87.5
Q ss_pred CChhhhHHHHHHHHHHHh-----------CCChHHHHHHHHHhCCCC--hHHHHHHHHHHhccccccCcccCCCCCCCCH
Q psy9795 47 IQLESRSPTENFLESVET-----------NQNYPLLILTLVERADVD--MTIRIAGAVAFKNYVKRNWPLVEDEPDKIHA 113 (337)
Q Consensus 47 pD~~~Rk~AE~~L~~~~~-----------~pgf~~~Ll~i~~~~~~~--~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~ 113 (337)
++.++++.|-..|..+.. ..|.+..|.+++.+.... ..++.-|+-.|+|.-.. .. -++
T Consensus 183 ~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~-~a--------~~~ 253 (354)
T 3nmw_A 183 KKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSL-IA--------TNE 253 (354)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHH-HT--------TCH
T ss_pred CCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhh-cc--------CCH
Confidence 355677766555544322 467888888888754321 25777777778776421 10 135
Q ss_pred HHHHHHHH-----HHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCC-----hHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy9795 114 SDREAIKG-----LILHLMLTSPEAIQKQLSDATAIIGKSDFPDKW-----PSLITDMVAKFGTGDFHIINGVLHTAHSL 183 (337)
Q Consensus 114 e~K~~IK~-----~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~W-----PeLl~~L~~~l~s~d~~~~~~aL~~L~~i 183 (337)
+.|..+++ .|++.|.+.+..++...+.+|..++..+ |+.= -+.++.|++++++++......|..+|..+
T Consensus 254 ~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~-~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A~~aL~nL 332 (354)
T 3nmw_A 254 DHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARN-PKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNL 332 (354)
T ss_dssp HHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSC-HHHHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCC-HHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 55666553 4666666667789999999999998432 1111 14689999999999998899999999999
Q ss_pred Hhh
Q psy9795 184 FKR 186 (337)
Q Consensus 184 ~k~ 186 (337)
+..
T Consensus 333 ~~~ 335 (354)
T 3nmw_A 333 MAN 335 (354)
T ss_dssp HTT
T ss_pred HcC
Confidence 986
No 71
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=72.81 E-value=7.8 Score=30.09 Aligned_cols=86 Identities=12% Similarity=0.071 Sum_probs=61.3
Q ss_pred HHHHhhcccCCCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHH
Q psy9795 35 CSTQGVPNHDKNIQLESRSPTENFLESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHAS 114 (337)
Q Consensus 35 ~~l~~tL~~~~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e 114 (337)
..+...|. ++|+.+|..|-..|-.+. .++....|...+.++ +..||..|+-.|-+.- +
T Consensus 45 ~~L~~~L~---d~~~~vR~~A~~aL~~~~-~~~a~~~L~~~L~d~--~~~VR~~A~~aL~~~~--------------~-- 102 (131)
T 1te4_A 45 EPLLESLS---NEDWRIRGAAAWIIGNFQ-DERAVEPLIKLLEDD--SGFVRSGAARSLEQIG--------------G-- 102 (131)
T ss_dssp HHHHHGGG---CSCHHHHHHHHHHHGGGC-SHHHHHHHHHHHHHC--CTHHHHHHHHHHHHHC--------------S--
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHcCC--CHHHHHHHHHHHHHhC--------------c--
Confidence 44445554 578999999999888775 345778888888764 6799999998887642 0
Q ss_pred HHHHHHHHHHHHHccCCHHHHHHHHHHHHH
Q psy9795 115 DREAIKGLILHLMLTSPEAIQKQLSDATAI 144 (337)
Q Consensus 115 ~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~ 144 (337)
......|+..+.+.+..||...+.++..
T Consensus 103 --~~a~~~L~~~l~d~~~~vr~~A~~aL~~ 130 (131)
T 1te4_A 103 --ERVRAAMEKLAETGTGFARKVAVNYLET 130 (131)
T ss_dssp --HHHHHHHHHHTTSCCTHHHHHHHHHGGG
T ss_pred --HHHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 1234566677766677899888877654
No 72
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=72.22 E-value=60 Score=30.09 Aligned_cols=127 Identities=8% Similarity=0.024 Sum_probs=86.3
Q ss_pred CCChhhhHHHHHHHHHHHh-----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHH
Q psy9795 46 NIQLESRSPTENFLESVET-----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHAS 114 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~-----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e 114 (337)
|+|.+++.+|-..|..+.. ..|.+..|++++.+.. +..++..|+-.|.|.... .++
T Consensus 138 s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~-~~~~~~~A~~aL~nLs~~------------~~~ 204 (354)
T 3nmw_A 138 SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVK-KESTLKSVLSALWNLSAH------------CTE 204 (354)
T ss_dssp CSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHTT------------CHH
T ss_pred CCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCC-CHHHHHHHHHHHHHHHcc------------Chh
Confidence 6788999998888866543 2367888888765533 677888777777776431 233
Q ss_pred HHHHHH--HH----HHHHHccCC-H---HHHHHHHHHHHHHHhh--hCCCCC-----hHHHHHHHHhhCCCCHHHHHHHH
Q psy9795 115 DREAIK--GL----ILHLMLTSP-E---AIQKQLSDATAIIGKS--DFPDKW-----PSLITDMVAKFGTGDFHIINGVL 177 (337)
Q Consensus 115 ~K~~IK--~~----Ll~~L~~~~-~---~Ir~ql~~~i~~Ia~~--DfP~~W-----PeLl~~L~~~l~s~d~~~~~~aL 177 (337)
.|..|. .. |++.|.+.+ . .++...+.+++.++.+ .-++.- .+.++.|++.+.+++...+..|.
T Consensus 205 nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~ 284 (354)
T 3nmw_A 205 NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNAC 284 (354)
T ss_dssp HHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHH
T ss_pred hhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHH
Confidence 344443 23 444444332 2 5888888888888863 222211 24789999999999988999999
Q ss_pred HHHHHHHh
Q psy9795 178 HTAHSLFK 185 (337)
Q Consensus 178 ~~L~~i~k 185 (337)
.+|..++.
T Consensus 285 ~aL~nLa~ 292 (354)
T 3nmw_A 285 GTLWNLSA 292 (354)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHhC
Confidence 99999984
No 73
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=71.62 E-value=31 Score=33.44 Aligned_cols=130 Identities=8% Similarity=0.068 Sum_probs=87.6
Q ss_pred CChhhhHHHHHHHHHHHh-----------CCChHHHHHHHHHhCCCC--hHHHHHHHHHHhccccccCcccCCCCCCCCH
Q psy9795 47 IQLESRSPTENFLESVET-----------NQNYPLLILTLVERADVD--MTIRIAGAVAFKNYVKRNWPLVEDEPDKIHA 113 (337)
Q Consensus 47 pD~~~Rk~AE~~L~~~~~-----------~pgf~~~Ll~i~~~~~~~--~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~ 113 (337)
.+..+++.|-..|..+.. ..|.+..|.+++.+.... ..++.-|+-.|+|.-. +. .-++
T Consensus 299 ~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~-~~--------a~~~ 369 (458)
T 3nmz_A 299 KKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSS-LI--------ATNE 369 (458)
T ss_dssp CSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHH-HH--------TTCH
T ss_pred CCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHh-cc--------cCCH
Confidence 355777766555544332 568888888888764321 2477777777777642 11 0134
Q ss_pred HHHHHHHH-----HHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCC-----hHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy9795 114 SDREAIKG-----LILHLMLTSPEAIQKQLSDATAIIGKSDFPDKW-----PSLITDMVAKFGTGDFHIINGVLHTAHSL 183 (337)
Q Consensus 114 e~K~~IK~-----~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~W-----PeLl~~L~~~l~s~d~~~~~~aL~~L~~i 183 (337)
+.|+.+++ .|++.|.+.+..++...+.+|..++..+ |+.= -+.++.|++++.+++......|..+|..+
T Consensus 370 ~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~-~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL 448 (458)
T 3nmz_A 370 DHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARN-PKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNL 448 (458)
T ss_dssp HHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSC-HHHHHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 55666553 3666666667789999999999998532 1111 14688899999999998899999999999
Q ss_pred Hhh
Q psy9795 184 FKR 186 (337)
Q Consensus 184 ~k~ 186 (337)
+..
T Consensus 449 ~~~ 451 (458)
T 3nmz_A 449 MAN 451 (458)
T ss_dssp HTC
T ss_pred HcC
Confidence 975
No 74
>1uw4_B UPF2, regulator of nonsense transcripts 2; nonsense mediated mRNA decay protein, RNA-binding protein, N domain, MIF4G domain; 1.95A {Homo sapiens} SCOP: a.118.1.14
Probab=69.26 E-value=37 Score=30.29 Aligned_cols=148 Identities=9% Similarity=0.122 Sum_probs=80.6
Q ss_pred HHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCH---HHHHHHHHHHHHHHhhhCCCCChHHHHHHHHh----
Q psy9795 92 AFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPE---AIQKQLSDATAIIGKSDFPDKWPSLITDMVAK---- 164 (337)
Q Consensus 92 ~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~---~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~---- 164 (337)
.+|..-+-+|.. ..+++.++.++.++.. ..-..+|.+++.++++ .|+---..++.+++.
T Consensus 24 vlk~lrKl~W~D-------------~e~~~~l~k~l~~~~~~ky~nI~~lA~ll~~L~~~-~~~~~i~vVD~vlE~Ir~g 89 (248)
T 1uw4_B 24 VLRQMRKLPWQD-------------QEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLY-QEDVGIHVVDGVLEDIRLG 89 (248)
T ss_dssp HHHHHHTSCTTS-------------HHHHHHHHHHHHCGGGSCGGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCc-------------HHHHHHHHHHhcchhhcccchHHHHHHHHHHHHhh-ChHHhhhhHHHHHHHHHHH
Confidence 445555668961 1356778888877431 2345778888888876 233223444444444
Q ss_pred hCCCCHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHHHHHhc--c------cCCChhHHHHHH
Q psy9795 165 FGTGDFHIINGVLHTAHSLFKRYRHEFKSQKLWTEIKFVLDNFAKPFTELFKATINLVG--E------HKDNPTALKVIY 236 (337)
Q Consensus 165 l~s~d~~~~~~aL~~L~~i~k~yr~~~~s~~l~~el~~il~~~~~~L~~lf~~l~~~~~--~------~~~~~~~~~~~~ 236 (337)
+..++......-+...+.+-+=|.|..-+.. . +|..++.++. . ...|++. ..+
T Consensus 90 LE~n~~~~nQrRia~vkyLgELYny~lv~s~------v-----------If~~Ly~li~fg~~~~~~~~~~D~p~--d~F 150 (248)
T 1uw4_B 90 MEVNQPKFNQRRISSAKFLGELYNYRMVESA------V-----------IFRTLYSFTSFGVNPDGSPSSLDPPE--HLF 150 (248)
T ss_dssp HHHCCGGGHHHHHHHHHHHHHHHHTTSSCHH------H-----------HHHHHHHHHHTTCCTTSCCCSSSCTT--CCH
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHHhcCCChH------H-----------HHHHHHHHHcCCCCCCCCCCCCCCCc--cch
Confidence 4445554434444445555555555422111 1 1222222221 0 0111111 123
Q ss_pred HHHHHHHHHhhhccccCChHHHHHhHHHHHHHHHHhh
Q psy9795 237 NSLVVSCKIFYSLNFQDLPEYFEDNMVVWMPALHNLL 273 (337)
Q Consensus 237 e~l~lilKif~~~~~~~lp~~~e~~l~~W~~~f~~iL 273 (337)
. ++++|.+.-.|...--.......|+.++..|..++
T Consensus 151 R-IrLvCtLL~tcg~~f~~~~~~kkLd~fL~ffQ~Y~ 186 (248)
T 1uw4_B 151 R-IRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYV 186 (248)
T ss_dssp H-HHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHH
T ss_pred h-HHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHH
Confidence 3 48899999988765555556788999999999986
No 75
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=67.41 E-value=32 Score=30.21 Aligned_cols=134 Identities=10% Similarity=0.004 Sum_probs=84.5
Q ss_pred HHHhhcccCCCCChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccC
Q psy9795 36 STQGVPNHDKNIQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVE 105 (337)
Q Consensus 36 ~l~~tL~~~~spD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~ 105 (337)
.+.+.|. |++.+++.+|-..|..+.. ..|.+..|++++.+. .+..+|-.|+-.|.|.-.
T Consensus 56 ~LV~lL~---s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~~-~~~~~~e~a~~aL~nLS~------- 124 (233)
T 3tt9_A 56 KLLQLLK---VQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQT-RDLETKKQITGLLWNLSS------- 124 (233)
T ss_dssp HHHHGGG---CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHT-------
T ss_pred HHHHHHc---CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHccC-CCHHHHHHHHHHHHHHHc-------
Confidence 3444554 4678899999888887654 247888999999763 367888888877777632
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHcc--------------------CCHHHHHHHHHHHHHHHhhh--CC---CCChHHHHH
Q psy9795 106 DEPDKIHASDREAIKGLILHLMLT--------------------SPEAIQKQLSDATAIIGKSD--FP---DKWPSLITD 160 (337)
Q Consensus 106 ~~~~~i~~e~K~~IK~~Ll~~L~~--------------------~~~~Ir~ql~~~i~~Ia~~D--fP---~~WPeLl~~ 160 (337)
.++.|..|.+.-+..|.. .+..++...+.++..++..+ +- .+-+.+++.
T Consensus 125 ------~~~~k~~i~~~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L~nLss~~~~~R~~~r~~~Gli~~ 198 (233)
T 3tt9_A 125 ------NDKLKNLMITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDS 198 (233)
T ss_dssp ------SGGGHHHHHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHH
T ss_pred ------ChhhHHHHHhccHHHHHHHHhccccCCcccccccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCcHHH
Confidence 133444454444555543 12367777777777776532 11 134567777
Q ss_pred HHHhhCCC------CHHHHHHHHHHHHHHHhh
Q psy9795 161 MVAKFGTG------DFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 161 L~~~l~s~------d~~~~~~aL~~L~~i~k~ 186 (337)
|+..+++. |...++.++-+|+.++..
T Consensus 199 Lv~~l~~~~~~~~~~~k~~En~v~~L~nLs~~ 230 (233)
T 3tt9_A 199 LVHYVRGTIADYQPDDKATENCVCILHNLSYQ 230 (233)
T ss_dssp HHHHHHHHHHTTCTTCHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhhhhcccchhHHHHHHHHHHHHHHhh
Confidence 77776642 335677777777776543
No 76
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=66.42 E-value=73 Score=28.56 Aligned_cols=166 Identities=10% Similarity=0.033 Sum_probs=103.4
Q ss_pred hheeeCCCchhHhhhccchhh-HHHHHHhhcccCCCCChhhhHHHHHHHH-HHHhCCChHHHHHHHH----H--hCCCCh
Q psy9795 12 KFIVVDPTNQCLEDMCDRNGE-FFCSTQGVPNHDKNIQLESRSPTENFLE-SVETNQNYPLLILTLV----E--RADVDM 83 (337)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~tL~~~~spD~~~Rk~AE~~L~-~~~~~pgf~~~Ll~i~----~--~~~~~~ 83 (337)
|+..-.|+..+.++....-.. |..-+.. .-.|.|-..|-+|=+.|. .++..|.-....++++ . -.+.+.
T Consensus 25 ~w~f~~p~~e~v~~L~~~~~~~~~~~~~~---~lfs~d~k~~~~ale~L~~~l~~~~~~~~~~lDll~kw~~lr~~d~N~ 101 (266)
T 2of3_A 25 KWNFQAPTDEHISQLQTLLGNQAKVSLMS---QLFHKDFKQHLAALDSLVRLADTSPRSLLSNSDLLLKWCTLRFFETNP 101 (266)
T ss_dssp CSCCSSCCHHHHHHHHHHHHTTBCHHHHH---HHTCSCHHHHHHHHHHHHHHHHHCHHHHHHTHHHHHHHHHHHTTSCCH
T ss_pred cCCCCCCCHHHHHHHHHHHHHhccHHHHH---HhcCCCHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhCCCH
Confidence 344456777776654441111 1111111 123446677777766665 4555665433333333 2 011245
Q ss_pred HHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHH
Q psy9795 84 TIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVA 163 (337)
Q Consensus 84 ~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~ 163 (337)
.+=+.+.-++...+.+-=. . ...+++.+-..+=-.|++-+..+...+|.+.-.++..+... ||- .-+++.+++
T Consensus 102 ~v~~~~L~~L~~l~~~l~~-~---~y~~~~~ea~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v-~~~--~~v~~~l~~ 174 (266)
T 2of3_A 102 AALIKVLELCKVIVELIRD-T---ETPMSQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDV-VGP--LKMTPMLLD 174 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHH-T---TCCCCHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHH-HCH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh-c---cccchHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH-CCH--HHHHHHHHH
Confidence 5555565666665544211 1 13688877777777777777777789999999999888765 441 237788888
Q ss_pred hhCCCCHHHHHHHHHHHHHHHhhh
Q psy9795 164 KFGTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 164 ~l~s~d~~~~~~aL~~L~~i~k~y 187 (337)
.+.+.|...+.++|.++..++..|
T Consensus 175 g~ksKN~R~R~e~l~~l~~li~~~ 198 (266)
T 2of3_A 175 ALKSKNARQRSECLLVIEYYITNA 198 (266)
T ss_dssp GGGCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHccCCHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999987
No 77
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=62.54 E-value=91 Score=30.10 Aligned_cols=127 Identities=8% Similarity=0.039 Sum_probs=86.6
Q ss_pred CCChhhhHHHHHHHHHHHh-----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHH
Q psy9795 46 NIQLESRSPTENFLESVET-----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHAS 114 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~-----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e 114 (337)
|+|.+++..|-..|..+.. ..|.+..|++++.+.. +..++..|+-.+.|..... ++
T Consensus 254 s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~-~~~v~~~A~~aL~nLs~~~------------~~ 320 (458)
T 3nmz_A 254 SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVK-KESTLKSVLSALWNLSAHC------------TE 320 (458)
T ss_dssp CSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCC-SHHHHHHHHHHHHHHHHHC------------HH
T ss_pred CCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCC-CHHHHHHHHHHHHHHccCC------------HH
Confidence 6788999998887766543 2467788888766533 6788888888888876421 23
Q ss_pred HHHHHH--H----HHHHHHccCC-H---HHHHHHHHHHHHHHhh--hCCCCC-----hHHHHHHHHhhCCCCHHHHHHHH
Q psy9795 115 DREAIK--G----LILHLMLTSP-E---AIQKQLSDATAIIGKS--DFPDKW-----PSLITDMVAKFGTGDFHIINGVL 177 (337)
Q Consensus 115 ~K~~IK--~----~Ll~~L~~~~-~---~Ir~ql~~~i~~Ia~~--DfP~~W-----PeLl~~L~~~l~s~d~~~~~~aL 177 (337)
.|..|- . .|+..|.+.. . .++...+.+++.|+.+ .-|+.- .+.++.|++.+.+++...+..|.
T Consensus 321 nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~ 400 (458)
T 3nmz_A 321 NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNAC 400 (458)
T ss_dssp HHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHH
Confidence 333332 2 3444444432 2 4888888889888863 222222 24689999999999988999999
Q ss_pred HHHHHHHh
Q psy9795 178 HTAHSLFK 185 (337)
Q Consensus 178 ~~L~~i~k 185 (337)
.+|..++.
T Consensus 401 ~aL~nLa~ 408 (458)
T 3nmz_A 401 GTLWNLSA 408 (458)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHc
Confidence 99999984
No 78
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=59.97 E-value=1.3e+02 Score=31.33 Aligned_cols=108 Identities=11% Similarity=0.021 Sum_probs=75.5
Q ss_pred CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHH----HHHHHHHccCCHHHHHHHHH
Q psy9795 65 NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIK----GLILHLMLTSPEAIQKQLSD 140 (337)
Q Consensus 65 ~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK----~~Ll~~L~~~~~~Ir~ql~~ 140 (337)
..|+...|+..+.+. +..++..|.-.+-+.... ++-|..|+ ..|...+.+.+..+|..-+.
T Consensus 288 ~~G~v~~li~Ll~s~--~~~~q~~A~~al~~aa~~-------------~~~R~~I~~~gv~~L~~Ll~s~~~~vr~~Al~ 352 (810)
T 3now_A 288 REGILQMILAMATTD--DELQQRVACECLIAASSK-------------KDKAKALCEQGVDILKRLYHSKNDGIRVRALV 352 (810)
T ss_dssp TTTHHHHHHHHHHSS--CHHHHHHHHHHHHHHTTS-------------HHHHHTTHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred ccchHHHHHHHhCCC--CHHHHHHHHHHHHHHcCC-------------cHHHHHHHHcCcHHHHHHHcCCCHHHHHHHHH
Confidence 578999999998875 577777777666664322 22222222 44555554455678888788
Q ss_pred HHHHHHhh---hCCCC------ChHHHHHHHHhhCCC--CHHHHHHHHHHHHHHHhhh
Q psy9795 141 ATAIIGKS---DFPDK------WPSLITDMVAKFGTG--DFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 141 ~i~~Ia~~---DfP~~------WPeLl~~L~~~l~s~--d~~~~~~aL~~L~~i~k~y 187 (337)
++..++.. |.+.. =..+++.+..++.++ |.+....+..+|.+++.+.
T Consensus 353 ~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~~ 410 (810)
T 3now_A 353 GLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDA 410 (810)
T ss_dssp HHHHHHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSH
T ss_pred HHHHhccccccCccccchhhccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCc
Confidence 88888753 33311 246789999999887 8888999999999999875
No 79
>4f52_E Glomulin; cullin-ring E3 ligase, inhibitor, cell cycle-ligase-signalin complex; 3.00A {Homo sapiens}
Probab=59.90 E-value=63 Score=32.52 Aligned_cols=138 Identities=15% Similarity=0.091 Sum_probs=83.2
Q ss_pred CCCCChhhhHHHHHHHHHH-HhCC--ChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHH
Q psy9795 44 DKNIQLESRSPTENFLESV-ETNQ--NYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIK 120 (337)
Q Consensus 44 ~~spD~~~Rk~AE~~L~~~-~~~p--gf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK 120 (337)
+.+|+...|+.|-..+..+ .+.| |=...|-.++.+. ...++|-.+.-.+|+-|...|..........+
T Consensus 375 ~~~P~~~lR~~a~~vl~~~I~~~~~e~R~~iL~~LL~~~-~~~~v~~~lI~~~KdeI~~al~~~~~~~~F~~-------- 445 (596)
T 4f52_E 375 TLCPIETLRKKSLAMLQLYINKLDSQGKYTLFRCLLNTS-NHSGVEAFIIQNIKNQIDMSLKRTRNNKWFTG-------- 445 (596)
T ss_dssp HHCSCHHHHHHHHHHHHHHHHHBCHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHTCCC----CTTTS--------
T ss_pred HHCCcHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHhcCCCCCcccc--------
Confidence 5678999999999988764 4444 3333444555554 47899999999999999999974321111111
Q ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHhhhCC-CCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhhhhhhhhhhhHHH
Q psy9795 121 GLILHLMLTSPEAIQKQLSDATAIIGKSDFP-DKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRYRHEFKSQKLWTE 199 (337)
Q Consensus 121 ~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP-~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr~~~~s~~l~~e 199 (337)
.++.+.+..|.. .| +.+++|+ .+.+.+.+||.+++.++-+=.-.......++.
T Consensus 446 ---------------~~l~~ll~~vl~--lp~g~~tDL~---------~~~d~I~aaLNLlr~LlirD~~~~n~Tgiw~~ 499 (596)
T 4f52_E 446 ---------------PQLISLLDLVLF--LPEGAETDLL---------QNSDRIMASLNLLRYLVIKDNENDNQTGLWTE 499 (596)
T ss_dssp ---------------HHHHHHHHHHSC--CTTTTTCCTT---------TSHHHHHHHHHHHHHHHHHSCTTTCCSSGGGT
T ss_pred ---------------HHHHHHHHHHhc--CCCCCCCchh---------hhhHHHHHHHHHHHHHHhccccccCccchhhh
Confidence 122223333333 23 4666664 45567899999998887752110001124455
Q ss_pred HHHHHHHhhHHHHHHHH
Q psy9795 200 IKFVLDNFAKPFTELFK 216 (337)
Q Consensus 200 l~~il~~~~~~L~~lf~ 216 (337)
+..+=.+|..||.....
T Consensus 500 l~~i~~~fL~PLr~~l~ 516 (596)
T 4f52_E 500 LGNIENNFLKPLHIGLN 516 (596)
T ss_dssp HHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66677778877765543
No 80
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=59.67 E-value=6.1 Score=32.32 Aligned_cols=45 Identities=4% Similarity=-0.079 Sum_probs=36.5
Q ss_pred HHHHHhh--hCC-CCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 142 TAIIGKS--DFP-DKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 142 i~~Ia~~--DfP-~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
+..||.. +++ +.|.++++.|...++..+.+.++-+|++|..+|+.
T Consensus 32 m~EIA~~T~~s~~~~~~eim~~L~kRL~~k~~~vk~KaL~lL~yL~~~ 79 (140)
T 1vdy_A 32 LEEICDLLRSSHVSIVKEFSEFILKRLDNKSPIVKQKALRLIKYAVGK 79 (140)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHhcCCCcceeehHHHHHHHHHHh
Confidence 4455543 344 34699999999999999999999999999999986
No 81
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=56.70 E-value=90 Score=31.27 Aligned_cols=128 Identities=9% Similarity=0.072 Sum_probs=83.2
Q ss_pred CCChhhhHHHHHHHHHHHh----------CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHH
Q psy9795 46 NIQLESRSPTENFLESVET----------NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASD 115 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~----------~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~ 115 (337)
|+|..++.+|-..|..+.. ..|-+..|++++.+. +..+|..|+-.|+|..... +++.
T Consensus 59 s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~--~~~vq~~Aa~AL~nLa~~~-----------~~~n 125 (584)
T 3l6x_A 59 FRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHP--KKEVHLGACGALKNISFGR-----------DQDN 125 (584)
T ss_dssp CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCS--SHHHHHHHHHHHHHHTSSS-----------CHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCC--CHHHHHHHHHHHHHHHccC-----------CHHH
Confidence 4567777777777766543 247788899988764 6899999999999986320 2455
Q ss_pred HHHHHH-----HHHHHHcc-CCHHHHHHHHHHHHHHHhhhCCC--CChHHHHHHHHhh------------------CCCC
Q psy9795 116 REAIKG-----LILHLMLT-SPEAIQKQLSDATAIIGKSDFPD--KWPSLITDMVAKF------------------GTGD 169 (337)
Q Consensus 116 K~~IK~-----~Ll~~L~~-~~~~Ir~ql~~~i~~Ia~~DfP~--~WPeLl~~L~~~l------------------~s~d 169 (337)
|..|.+ .|+..|.+ .+..++.+.+.++..++.++-+. -=.+-++.|++++ .+.+
T Consensus 126 k~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d 205 (584)
T 3l6x_A 126 KIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEW 205 (584)
T ss_dssp HHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHHHTHHHHHHHTHHHHHCCC----------CCCC
T ss_pred HHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhccHHHHHHHHhccccccccccccccccccccc
Confidence 555544 36666665 35678888888888887755321 0023356666654 1224
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy9795 170 FHIINGVLHTAHSLFKR 186 (337)
Q Consensus 170 ~~~~~~aL~~L~~i~k~ 186 (337)
....+.+..||..+...
T Consensus 206 ~~V~~nAa~~L~NLs~~ 222 (584)
T 3l6x_A 206 ESVLTNTAGCLRNVSSE 222 (584)
T ss_dssp HHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 56677777777777653
No 82
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=56.63 E-value=91 Score=27.94 Aligned_cols=90 Identities=8% Similarity=-0.016 Sum_probs=62.1
Q ss_pred ChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHH---
Q psy9795 82 DMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLI--- 158 (337)
Q Consensus 82 ~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl--- 158 (337)
...+|..+--.++....- .. + ..+=..+++++.+.+...|.-+...+..+...-... =...+
T Consensus 145 k~~vR~~~r~il~~l~~v-~~----------~---~~v~~~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~-~~~~l~~~ 209 (266)
T 2of3_A 145 KDNMRTSVRDIVNVLSDV-VG----------P---LKMTPMLLDALKSKNARQRSECLLVIEYYITNAGIS-PLKSLSVE 209 (266)
T ss_dssp SHHHHHHHHHHHHHHHHH-HC----------H---HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHCSG-GGGGGCHH
T ss_pred hHHHHHHHHHHHHHHHHH-CC----------H---HHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCCC-ccccccch
Confidence 456777777666554322 11 1 234455667776666778888877777777654432 23467
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHHHHhh
Q psy9795 159 TDMVAKFGTGDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 159 ~~L~~~l~s~d~~~~~~aL~~L~~i~k~ 186 (337)
+.+..++++.|.+...+|+.|+-++++.
T Consensus 210 ~~ia~ll~D~d~~VR~aAl~~lve~y~~ 237 (266)
T 2of3_A 210 KTVAPFVGDKDVNVRNAAINVLVACFKF 237 (266)
T ss_dssp HHHGGGGGCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988765
No 83
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=52.29 E-value=1.9e+02 Score=30.54 Aligned_cols=92 Identities=12% Similarity=0.091 Sum_probs=56.7
Q ss_pred HHHHHHccCCHHHHHHHHHHHHHHHhhhCC-----------CCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhhhhh
Q psy9795 122 LILHLMLTSPEAIQKQLSDATAIIGKSDFP-----------DKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRYRHE 190 (337)
Q Consensus 122 ~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP-----------~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr~~ 190 (337)
.+++.|.++++.|+...|.++..++..--. ..-++++..+.+.++.-+.......+.++..++..-.
T Consensus 544 ~ll~~l~~~~~~V~~~A~~al~~l~~~~~~~l~~~~~~~~~p~~~~il~~l~~~~~~~~~~~~~~~~eai~~ii~~~~-- 621 (1049)
T 3m1i_C 544 KLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEER-- 621 (1049)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSSCHHHHHHHTHHHHHTTSCHHHHHHHHHHHHHHHHTCC--
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHcCC--
Confidence 445555555688999999999999874210 1245677777676666555556677778888776531
Q ss_pred hhhhhhHHHHHHHHHHhhHHHHHHHHHHHH
Q psy9795 191 FKSQKLWTEIKFVLDNFAKPFTELFKATIN 220 (337)
Q Consensus 191 ~~s~~l~~el~~il~~~~~~L~~lf~~l~~ 220 (337)
+.+ .....++.+.+++.+-+..+..
T Consensus 622 --~~~---~~~~~~~~l~~~~~~~~~~~~~ 646 (1049)
T 3m1i_C 622 --SVA---ERNRLLSDLMQLPNMAWDTIVE 646 (1049)
T ss_dssp --SHH---HHHHHHHHHTHHHHHHHHHHHH
T ss_pred --CHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 111 2234556666666555655544
No 84
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=50.38 E-value=2.3e+02 Score=29.21 Aligned_cols=181 Identities=13% Similarity=0.145 Sum_probs=99.0
Q ss_pred CChhhhHHHHHHHHHHHhC-----CChHHHHHHHHHhCC-CChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHH
Q psy9795 47 IQLESRSPTENFLESVETN-----QNYPLLILTLVERAD-VDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIK 120 (337)
Q Consensus 47 pD~~~Rk~AE~~L~~~~~~-----pgf~~~Ll~i~~~~~-~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK 120 (337)
+|-..|..|=-.+..+... ..+...++.++..-. .+..+|..|.-.+-++. .|-.. ..+-=..+=
T Consensus 461 ~~w~~~eaal~al~~i~~~~~~~~~~~l~~l~~~l~~l~~~~~~vr~~~~~~l~~~~--~~l~~-------~~~~l~~vl 531 (963)
T 2x19_B 461 YSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALS--EWLAD-------HPVMINSVL 531 (963)
T ss_dssp CCHHHHHHHHHHHHHHTTSCCSSCCSHHHHHHHHGGGSCCCSHHHHHHHHHHHHHTH--HHHHH-------CHHHHTTTH
T ss_pred CchHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH--HHHHh-------CHHHHHHHH
Confidence 4555555554444444331 245566666543211 24678888877776664 24211 011111223
Q ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHhh---hCCCCChHHHHHHHHhhCCC--CHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy9795 121 GLILHLMLTSPEAIQKQLSDATAIIGKS---DFPDKWPSLITDMVAKFGTG--DFHIINGVLHTAHSLFKRYRHEFKSQK 195 (337)
Q Consensus 121 ~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~---DfP~~WPeLl~~L~~~l~s~--d~~~~~~aL~~L~~i~k~yr~~~~s~~ 195 (337)
..|+..|.+ +.|+...+.++..++.. .+-...+++++.+.+.++++ +.......+.++..++.... .
T Consensus 532 ~~l~~~l~~--~~V~~~A~~al~~l~~~~~~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~~~~-----~- 603 (963)
T 2x19_B 532 PLVLHALGN--PELSVSSVSTLKKICRECKYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQ-----V- 603 (963)
T ss_dssp HHHHHHTTC--GGGHHHHHHHHHHHHHHTGGGCTTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTSC-----H-
T ss_pred HHHHHHhCC--chHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHhcCC-----H-
Confidence 355555533 67888999999999853 23346788888888888763 45667778888888886431 1
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhcccCCChhHHHHHHHHHHHHHHHhhhcc
Q psy9795 196 LWTEIKFVLDNFAKPFTELFKATINLVGEHKDNPTALKVIYNSLVVSCKIFYSLN 250 (337)
Q Consensus 196 l~~el~~il~~~~~~L~~lf~~l~~~~~~~~~~~~~~~~~~e~l~lilKif~~~~ 250 (337)
.+....++.+.+++...+..+. ++. .++.........+..+..+++.+.
T Consensus 604 --~~~~~~~~~l~~~l~~~l~~~~---~~~-~~~~~~~~~~~~l~~l~~i~~~~~ 652 (963)
T 2x19_B 604 --EEILKNLHSLISPYIQQLEKLA---EEI-PNPSNKLAIVHILGLLSNLFTTLD 652 (963)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHH---SSC-SCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred --HHHHHHHHHHHHHHHHHHHHHH---hCC-CCHHHHHHHHHHHHHHHHHHHHcC
Confidence 1233455666666655555442 221 233333323333344445555443
No 85
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=49.40 E-value=71 Score=34.04 Aligned_cols=80 Identities=18% Similarity=0.211 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHHHHHHHhhhCC---CCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHH
Q psy9795 130 SPEAIQKQLSDATAIIGKSDFP---DKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRYRHEFKSQKLWTEIKFVLDN 206 (337)
Q Consensus 130 ~~~~Ir~ql~~~i~~Ia~~DfP---~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr~~~~s~~l~~el~~il~~ 206 (337)
....||...+.+++.+...--+ ..=|.+++.++... +.......|.++++++.+|.. +. ..++++
T Consensus 713 ~~~~irea~~~~~~r~i~~lg~~~~p~lp~~i~~ll~~~---~~~e~~~fL~l~~qli~~f~~-----~~----~~~l~~ 780 (980)
T 3ibv_A 713 FNEDIRGAVRFTSGRIINVVGPDMLPKVPQLISILLNSI---DMNELVDVLSFISQLIHIYKD-----NM----MEITNR 780 (980)
T ss_dssp CSHHHHHHHHHHHHHHTTTTHHHHTTTHHHHHHHHHHHC---CTTTHHHHHHHHHHHHHHTTT-----TS----HHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHccHhHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHH-----HH----HHHHHH
Confidence 3567888888888888754322 23344444444322 444567789999999999843 22 234444
Q ss_pred hhHHHHHHHHHHHHHhcc
Q psy9795 207 FAKPFTELFKATINLVGE 224 (337)
Q Consensus 207 ~~~~L~~lf~~l~~~~~~ 224 (337)
+.+ .++..+..++++
T Consensus 781 ll~---~l~~~if~~l~~ 795 (980)
T 3ibv_A 781 MLP---TLLMRIFSSLSA 795 (980)
T ss_dssp HHH---HHHHHHHHHTTC
T ss_pred HHH---HHHHHHHHHhcC
Confidence 444 455566665544
No 86
>1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6
Probab=49.07 E-value=6.1 Score=42.46 Aligned_cols=99 Identities=7% Similarity=0.059 Sum_probs=73.0
Q ss_pred HHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCC-HHHHHHHHHHHHHHHhhh-CCCCChHHHHHHH
Q psy9795 85 IRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSP-EAIQKQLSDATAIIGKSD-FPDKWPSLITDMV 162 (337)
Q Consensus 85 iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~-~~Ir~ql~~~i~~Ia~~D-fP~~WPeLl~~L~ 162 (337)
+|+.+..++..++-+|.- .++.+++..|.+.++.+|.++. -.||...+.+++.|.+.- +...=.+++..+.
T Consensus 817 ~R~~~L~~lq~~~f~n~f-------~l~~~~~~~i~~~v~~~L~D~q~~EVRe~Aa~tLsgll~c~~~~~~~~~li~~f~ 889 (997)
T 1vsy_5 817 QTKLQLAFIQHFLSAELL-------QLTEEEKNKILEFVVSNLYNEQFVEVRVRAASILSDIVHNWKEEQPLLSLIERFA 889 (997)
T ss_dssp SHHHHHHHHHHHHHHHTT-------TSCTTHHHHTHHHHTTTTTCSSCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH-------HcCHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHcCCchhhHHHHHHHHH
Confidence 788877777777766653 7888899999999999999988 899999999999999874 3121124444444
Q ss_pred HhhCC------------CCHHHHHHHHHHHHHHHhhhhhh
Q psy9795 163 AKFGT------------GDFHIINGVLHTAHSLFKRYRHE 190 (337)
Q Consensus 163 ~~l~s------------~d~~~~~~aL~~L~~i~k~yr~~ 190 (337)
..... .+...+|+|...|..++..|-|.
T Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~rH~aVLgL~AlV~a~Py~ 929 (997)
T 1vsy_5 890 KGLDVNKYTSKERQKLSKTDIKIHGNVLGLGAIISAFPYV 929 (997)
T ss_dssp TSSTTTSSCHHHHHHHHHHCHHHHHHHHHHHHHHTTCSCC
T ss_pred HHHhhcccccccccccchHHHHHHHHHHHHHHHHhhCCCC
Confidence 44312 11146899999999999998873
No 87
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=48.24 E-value=2.2e+02 Score=29.53 Aligned_cols=117 Identities=14% Similarity=0.155 Sum_probs=75.5
Q ss_pred CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Q psy9795 66 QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAII 145 (337)
Q Consensus 66 pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~I 145 (337)
.|++..|.+++.+. ...+|..|+-.+-|.+..-=.....-...-.+..+..++ .|+..+...+..+|...+.+++.+
T Consensus 605 ~ga~~~L~~LL~s~--n~~VrrAA~elI~NL~~~~e~i~~k~~~~~~~~~~~rL~-lLV~Ll~s~D~~~r~AAagALAnL 681 (778)
T 3opb_A 605 KVYWSTIENLMLDE--NVPLQRSTLELISNMMSHPLTIAAKFFNLENPQSLRNFN-ILVKLLQLSDVESQRAVAAIFANI 681 (778)
T ss_dssp HHHHHHHHHGGGCS--SHHHHHHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHH-HHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCC--CHHHHHHHHHHHHHHhCCcHHHHHHHHhhcCchhhccHH-HHHHHHcCCCHHHHHHHHHHHHHh
Confidence 35777787777663 579999999999999863211000000000111122232 345555556788999998888888
Q ss_pred Hhh-hCC----CCChHHHHHHHHhhCC--CCHHHHHHHHHHHHHHHh
Q psy9795 146 GKS-DFP----DKWPSLITDMVAKFGT--GDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 146 a~~-DfP----~~WPeLl~~L~~~l~s--~d~~~~~~aL~~L~~i~k 185 (337)
... +.- -+=++.++.+++.++. ++...++.|+.+++-+++
T Consensus 682 ts~~~~ia~~ll~~~~gi~~Ll~lL~~~~~~~~l~~R~~~~l~NL~~ 728 (778)
T 3opb_A 682 ATTIPLIAKELLTKKELIENAIQVFADQIDDIELRQRLLMLFFGLFE 728 (778)
T ss_dssp HHHCHHHHHHHTTCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT
T ss_pred cCCChHHHHHHHHccccHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 532 210 0224688888888887 789999999999999997
No 88
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=47.98 E-value=1.2e+02 Score=26.30 Aligned_cols=101 Identities=9% Similarity=-0.060 Sum_probs=64.9
Q ss_pred CCCChhhhHHHHHHHHHHHhCCChHHHHHHHHHh--CCCChHHHHHHHHHHhccccccCcccCCCCCCCCH-HHHHHHHH
Q psy9795 45 KNIQLESRSPTENFLESVETNQNYPLLILTLVER--ADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHA-SDREAIKG 121 (337)
Q Consensus 45 ~spD~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~--~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~-e~K~~IK~ 121 (337)
.++.+.+|..|-+.+..+-........+++.+.. .+-.+.+|..+...|.+.+..+-. ..++. ..-..+-.
T Consensus 113 ~~~k~~~~~~a~~~l~~~~~~~~~~~~~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~fg~------~~~~~k~~l~~i~~ 186 (278)
T 4ffb_C 113 TSSRATTKTQSMSCILSLCGLDTSITQSVELVIPFFEKKLPKLIAAAANCVYELMAAFGL------TNVNVQTFLPELLK 186 (278)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTSSSSHHHHHHHGGGGGCSCHHHHHHHHHHHHHHHHHHTT------TTCCHHHHHHHHGG
T ss_pred cCccHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCC------CcCCchhHHHHHHH
Confidence 4566788888888776655443333333343321 133689999999999999987543 13332 12223444
Q ss_pred HHHHHHccCCHHHHHHHHHHHHHHHhhhCC
Q psy9795 122 LILHLMLTSPEAIQKQLSDATAIIGKSDFP 151 (337)
Q Consensus 122 ~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP 151 (337)
.+..++.++++.||.....++..+.++-.+
T Consensus 187 ~l~k~l~d~~~~VR~aA~~l~~~ly~~~G~ 216 (278)
T 4ffb_C 187 HVPQLAGHGDRNVRSQTMNLIVEIYKVTGN 216 (278)
T ss_dssp GHHHHHTCSSHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHhCc
Confidence 677777888899999999999999876543
No 89
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=39.97 E-value=1.9e+02 Score=25.13 Aligned_cols=104 Identities=15% Similarity=0.137 Sum_probs=70.3
Q ss_pred CChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHH-----HHHHHHcc-CCHHHHHHHH
Q psy9795 66 QNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKG-----LILHLMLT-SPEAIQKQLS 139 (337)
Q Consensus 66 pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~-----~Ll~~L~~-~~~~Ir~ql~ 139 (337)
.|.+..|.+++.+. +..+|..|+-.|+|.... +++.|..|.+ .|++.|.+ .+..++.+.+
T Consensus 51 ~G~Ip~LV~lL~s~--~~~vq~~Aa~aL~nLa~~------------~~~nk~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~ 116 (233)
T 3tt9_A 51 LRGILKLLQLLKVQ--NEDVQRAVCGALRNLVFE------------DNDNKLEVAELNGVPRLLQVLKQTRDLETKKQIT 116 (233)
T ss_dssp TTHHHHHHHGGGCC--CHHHHHHHHHHHHHHHTT------------CHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHH
T ss_pred cCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHhC------------CHHHHHHHHHcCCHHHHHHHHccCCCHHHHHHHH
Confidence 57788999998763 689999999999998642 2455666654 36666664 4678899999
Q ss_pred HHHHHHHhhhCCCCChH----HHHHHHHhhC----------------CCCHHHHHHHHHHHHHHHh
Q psy9795 140 DATAIIGKSDFPDKWPS----LITDMVAKFG----------------TGDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 140 ~~i~~Ia~~DfP~~WPe----Ll~~L~~~l~----------------s~d~~~~~~aL~~L~~i~k 185 (337)
.++-.++.++-- + +. -++.|++.+. +.+....+.+-.||..+.-
T Consensus 117 ~aL~nLS~~~~~-k-~~i~~~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L~nLss 180 (233)
T 3tt9_A 117 GLLWNLSSNDKL-K-NLMITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSS 180 (233)
T ss_dssp HHHHHHHTSGGG-H-HHHHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcChhh-H-HHHHhccHHHHHHHHhccccCCcccccccccccchHHHHHHHHHHHHHHhc
Confidence 888888876521 1 12 2344444331 1255677888888888754
No 90
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=38.65 E-value=66 Score=30.56 Aligned_cols=70 Identities=13% Similarity=0.148 Sum_probs=52.4
Q ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh-hhhhh
Q psy9795 121 GLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKR-YRHEF 191 (337)
Q Consensus 121 ~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~-yr~~~ 191 (337)
..|++.-...+..||+.+++.|...++.+ ++.=+..++.|..++.+.|+..+..+..|...+++- ++|-.
T Consensus 66 ~~il~f~~d~~~~vRk~~a~FieEa~~~~-~el~~~~l~~L~~LL~d~d~~V~K~~I~~~tslYpl~f~~i~ 136 (386)
T 3o2t_A 66 DEIIAFQADKSIEVRKFVIGFIEEACKRD-IELLLKLIANLNMLLRDENVNVVKKAILTMTQLYKVALQWMV 136 (386)
T ss_dssp HHHHGGGGCSCHHHHHHHHHHHHHHHHHC-GGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555555566789999999999999865 445588888888888888888888888887777643 45543
No 91
>1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6
Probab=38.44 E-value=41 Score=36.11 Aligned_cols=70 Identities=14% Similarity=0.142 Sum_probs=57.5
Q ss_pred CCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCC----CCHHHHHHHHHHHH
Q psy9795 110 KIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGT----GDFHIINGVLHTAH 181 (337)
Q Consensus 110 ~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s----~d~~~~~~aL~~L~ 181 (337)
..++-++..++ .|++.-.+.-..||.....++..+.+. ||+.++.++|.+++.++. .|.+.+.|||.+|.
T Consensus 126 ~~t~l~~~ll~-dL~~Ls~S~Y~~VR~~AQ~~L~~~~~~-~~gs~~~iip~ll~~L~~~~~~~~~~~iKGaLy~L~ 199 (997)
T 1vsy_5 126 KASKLENLLLV-DIIQLATSLYPDIYKPAQGTLVHCMKQ-LVGSYGVVINKIIPSLEKAIKDHDYMKIQVILNVLL 199 (997)
T ss_dssp CCCSHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHTT-BTTHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHTT
T ss_pred CCChHHHHHHH-HHHHHhcCchHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHhccccCCCHHHHHHHHHHHh
Confidence 46777877775 455555556789999999999999988 899999999999999875 37788999999887
No 92
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=38.18 E-value=1.1e+02 Score=31.22 Aligned_cols=136 Identities=12% Similarity=0.131 Sum_probs=93.4
Q ss_pred hHHHHHHhhcc--cCCCCC---hhhhHHHHHHHHHHHhCCChHHHHHHHHHh-CCCChHHHHHHHHHHhccccccCcccC
Q psy9795 32 EFFCSTQGVPN--HDKNIQ---LESRSPTENFLESVETNQNYPLLILTLVER-ADVDMTIRIAGAVAFKNYVKRNWPLVE 105 (337)
Q Consensus 32 ~~~~~l~~tL~--~~~spD---~~~Rk~AE~~L~~~~~~pgf~~~Ll~i~~~-~~~~~~iRq~AaI~LKN~V~~~W~~~~ 105 (337)
.+.|++ .|+ ++...| +.+|..|-+.|-.+...|+-...|.+++.. ....-++|+.|-+-+|-. +.
T Consensus 222 RLLCVL--ALDRFGDYVSDqVVAPVRETaAQtLGaL~hLp~e~~IL~qLV~~l~~~~WEVRHGGLLGLKYL-~D------ 292 (800)
T 3oc3_A 222 KIYEIL--VTDKFNDFVDDRTVAPVRDAAAYLLSRIYPLIGPNDIIEQLVGFLDSGDWQVQFSGLIALGYL-KE------ 292 (800)
T ss_dssp HHHHHH--HHBCCBBCSSSSCBCHHHHHHHHHHHHHTTTSCSCCHHHHHTTGGGCSCHHHHHHHHHHHHHT-GG------
T ss_pred HHHHHH--HhccccccccCeeeeehHHHHHHHHHHHHhCChhHHHHHHHHhhcCCCCeeehhhhHHHHHHH-HH------
Confidence 345555 333 344444 478999999998884445434555555421 123689999999999966 11
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCC-CHH-HHHHHHHHHHHH
Q psy9795 106 DEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTG-DFH-IINGVLHTAHSL 183 (337)
Q Consensus 106 ~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~-d~~-~~~~aL~~L~~i 183 (337)
.+.+ -..+-..++.+|.+.+.-||...|+++.-|+ .|+.-+.++..+-.++.+- |.. ..-..+..|..+
T Consensus 293 ----LL~~--Ld~Vv~aVL~GL~D~DDDVRAVAAetLiPIA---~p~~l~~LL~iLWd~L~~LDDLSASTgSVMdLLAkL 363 (800)
T 3oc3_A 293 ----FVED--KDGLCRKLVSLLSSPDEDIKLLSAELLCHFP---ITDSLDLVLEKCWKNIESEELISVSKTSNLSLLTKI 363 (800)
T ss_dssp ----GCCC--HHHHHHHHHHHTTCSSHHHHHHHHHHHTTSC---CSSTHHHHHHHHHHHHHTCCSCCTTHHHHHHHHHHH
T ss_pred ----HHHH--HHHHHHHHHhhcCCcccHHHHHHHHHhhhhc---chhhHHHHHHHHHHHhhhhcccchhhHHHHHHHHHH
Confidence 1211 5677788888888889999999999999999 6788999999999998763 322 344556666665
Q ss_pred Hh
Q psy9795 184 FK 185 (337)
Q Consensus 184 ~k 185 (337)
|.
T Consensus 364 ~s 365 (800)
T 3oc3_A 364 YR 365 (800)
T ss_dssp HH
T ss_pred Hc
Confidence 54
No 93
>3clj_A Protein NRD1; CTD-interacting domain, nucleus, phosphoprotein, RNA polymer binding protein, RNA binding protein; 2.10A {Saccharomyces cerevisiae}
Probab=37.97 E-value=1.7e+02 Score=24.07 Aligned_cols=39 Identities=15% Similarity=0.022 Sum_probs=32.4
Q ss_pred ChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhhhhhhh
Q psy9795 154 WPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRYRHEFK 192 (337)
Q Consensus 154 WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr~~~~ 192 (337)
..-++..|...+..--+....++|+++..|+|.|+.+.+
T Consensus 39 ~~~iv~~l~~~ikk~p~~hKL~~LYVvDSIvR~~~~~~~ 77 (157)
T 3clj_A 39 ESKIISLIIDYSRLCPDSHKLGSLYIIDSIGRAYLDETR 77 (157)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcceeeeeeehHHHHHHHHHHHH
Confidence 445888888888777778899999999999999987653
No 94
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=37.63 E-value=3.1e+02 Score=26.96 Aligned_cols=160 Identities=7% Similarity=-0.010 Sum_probs=91.7
Q ss_pred HHHhhcccCCCCChhhhHHHHHHHHHHHh-CC-ChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCH
Q psy9795 36 STQGVPNHDKNIQLESRSPTENFLESVET-NQ-NYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHA 113 (337)
Q Consensus 36 ~l~~tL~~~~spD~~~Rk~AE~~L~~~~~-~p-gf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~ 113 (337)
+|.++|+ +-|+..+....+.|.++-+ .| +.+..|+.-+.+. +..+|--+.-+++..+..-=. ..++.
T Consensus 104 vL~QlLq---tdd~~E~~~V~~sL~sllk~Dpk~tl~~lf~~i~~~--~e~~Rer~lkFi~~kl~~l~~------~~l~~ 172 (507)
T 3u0r_A 104 ILTQLLQ---TDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQILQG--EDIVRERAIKFLSTKLKTLPD------EVLTK 172 (507)
T ss_dssp HHHHHTT---CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHS--CHHHHHHHHHHHHHHGGGSCT------TTSCH
T ss_pred HHHHHHh---ccchHHHHHHHHHHHHHHhcChHHHHHHHHHHHccc--chHHHHHHHHHHHHHHhhcch------hhccH
Confidence 4444454 3466888888888877655 44 5555555544543 578888887778777766321 26789
Q ss_pred HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhh------CCCCHHHHHHHHHHHHHHHhhh
Q psy9795 114 SDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKF------GTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 114 e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l------~s~d~~~~~~aL~~L~~i~k~y 187 (337)
|....|...+..+|......=-..+-.++...--.+=|..-.+|++.+.+.. ...|.+.+..-+.|+..-.--|
T Consensus 173 E~E~~i~~~ikK~L~DVT~~EF~L~m~lL~~lkl~~t~~g~qeLv~ii~eQa~L~~~f~~sD~e~vdRlI~C~~~ALP~F 252 (507)
T 3u0r_A 173 EVEELILTESKKVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQCTRQAVPLF 252 (507)
T ss_dssp HHHHHHHHHHHHHTTSCCHHHHHHHHHHHHTSGGGSSHHHHHHHHHHHHHHHTTTSCCCSSCHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHhcccccCchHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999966543211112222211111111111124444444432 2357788888888888876554
Q ss_pred hhhhhhhhhHHHHHHHHHHhhH
Q psy9795 188 RHEFKSQKLWTEIKFVLDNFAK 209 (337)
Q Consensus 188 r~~~~s~~l~~el~~il~~~~~ 209 (337)
.-..+|.+ -++++.++++|
T Consensus 253 S~~v~Stk---Fv~y~~~kIlP 271 (507)
T 3u0r_A 253 SKNVHSTR---FVTYFCEQVLP 271 (507)
T ss_dssp BTTBCCHH---HHHHHHHHTGG
T ss_pred ccCCChHH---HHHHHHHhhcc
Confidence 33222332 34556665555
No 95
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=35.93 E-value=1.2e+02 Score=22.64 Aligned_cols=44 Identities=9% Similarity=0.134 Sum_probs=27.0
Q ss_pred cCCCCChhhhHHHHHHHHHHHhCC---C-----hHHHHHHHHHhCCCChHHH
Q psy9795 43 HDKNIQLESRSPTENFLESVETNQ---N-----YPLLILTLVERADVDMTIR 86 (337)
Q Consensus 43 ~~~spD~~~Rk~AE~~L~~~~~~p---g-----f~~~Ll~i~~~~~~~~~iR 86 (337)
++.|-=.++|+.|++..+.+.... + ....|=+|..+++.|.++|
T Consensus 24 ~D~sVPRNIRraA~ea~~~L~~e~~~~~vRAA~aIs~LDeISnDPNmP~h~R 75 (89)
T 2qsb_A 24 QDITVPKNVRKVAQDSKAKLSQENESLDLRCATVLSMLDEMANDPNVPAHGR 75 (89)
T ss_dssp TCTTSCHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHTCTTSCHHHH
T ss_pred cCCCCChHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHhhcCCCCChHHH
Confidence 344455689999999888775431 1 2334444555566666666
No 96
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=35.76 E-value=4.3e+02 Score=28.13 Aligned_cols=96 Identities=11% Similarity=0.129 Sum_probs=62.8
Q ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHHhh---hCC-----C---CChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhh
Q psy9795 119 IKGLILHLMLTSPEAIQKQLSDATAIIGKS---DFP-----D---KWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 119 IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~---DfP-----~---~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~y 187 (337)
+=+.|++.|....+.++...|.++..|+.. .+. + .-++++..+.+.+..-+.........++..+++..
T Consensus 541 vl~~L~~~l~~~~~~v~~~A~~al~~l~~~c~~~l~~~~~~e~~p~~~~il~~l~~~~~~l~~~~~~~lyeai~~vi~~~ 620 (1023)
T 4hat_C 541 VILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEE 620 (1023)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSSCHHHHHHHTHHHHHTTSCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 344566666555678999999999999863 221 1 12445555555555456777788999999999875
Q ss_pred hhhhhhhhhHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy9795 188 RHEFKSQKLWTEIKFVLDNFAKPFTELFKATINL 221 (337)
Q Consensus 188 r~~~~s~~l~~el~~il~~~~~~L~~lf~~l~~~ 221 (337)
.. + ......++.+.+++..-+..+.+.
T Consensus 621 ~~-----~--~~~~~~l~~L~~~~~~~~~~l~~~ 647 (1023)
T 4hat_C 621 RS-----V--AERNRLLSDLMQLPNMAWDTIVEQ 647 (1023)
T ss_dssp CS-----H--HHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CC-----H--hhHHHHHHHHHHhHHHHHHHHHHH
Confidence 21 1 123456777777777777777753
No 97
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=33.00 E-value=4e+02 Score=28.36 Aligned_cols=120 Identities=11% Similarity=-0.007 Sum_probs=81.9
Q ss_pred CCChhhhHHHHHHHHHHHh---CCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHH
Q psy9795 46 NIQLESRSPTENFLESVET---NQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGL 122 (337)
Q Consensus 46 spD~~~Rk~AE~~L~~~~~---~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~ 122 (337)
+.|+.+|..|--.+--... ++..+..||+++.+. .+..+|+.|++-|=...-.. . + .+ ..
T Consensus 553 ~~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~d-~~d~VRraAViaLGlI~~g~---~-e---~v---------~r 615 (963)
T 4ady_A 553 SDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSD-SNDDVRRAAVIALGFVLLRD---Y-T---TV---------PR 615 (963)
T ss_dssp CSCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHC-SCHHHHHHHHHHHHHHTSSS---C-S---SH---------HH
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHhhccCC---H-H---HH---------HH
Confidence 4577788877666654333 334567789988874 46789999998886442221 0 0 11 12
Q ss_pred HHHHHcc-CCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Q psy9795 123 ILHLMLT-SPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFK 185 (337)
Q Consensus 123 Ll~~L~~-~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k 185 (337)
+++.|.+ .++.||...+.++..|..-. |. ++.++.|..+.+.+|.....+|+..|..|.-
T Consensus 616 lv~~L~~~~d~~VR~gAalALGli~aGn-~~--~~aid~L~~L~~D~d~~Vrq~Ai~ALG~Ig~ 676 (963)
T 4ady_A 616 IVQLLSKSHNAHVRCGTAFALGIACAGK-GL--QSAIDVLDPLTKDPVDFVRQAAMIALSMILI 676 (963)
T ss_dssp HTTTGGGCSCHHHHHHHHHHHHHHTSSS-CC--HHHHHHHHHHHTCSSHHHHHHHHHHHHHHST
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHhccCC-Cc--HHHHHHHHHHccCCCHHHHHHHHHHHHHHhc
Confidence 3344444 56899999999999886433 33 6788888888888888888899998888763
No 98
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=31.38 E-value=2e+02 Score=22.97 Aligned_cols=58 Identities=12% Similarity=0.028 Sum_probs=42.6
Q ss_pred CCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy9795 152 DKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRYRHEFKSQKLWTEIKFVLDNFAKPFTELFKATINL 221 (337)
Q Consensus 152 ~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr~~~~s~~l~~el~~il~~~~~~L~~lf~~l~~~ 221 (337)
+.-+.++..+...+....+.+...+|.++..|++..... ....|.+.+..+|...+..
T Consensus 39 ~~a~~Iv~~i~~~i~k~~p~~KL~~LYL~DsIvkN~g~~------------y~~~F~~~l~~~f~~~~~~ 96 (144)
T 1sz9_A 39 SCAQYFVDAIESRIEKCMPKQKLYAFYALDSICKNVGSP------------YTIYFSRNLFNLYKRTYLL 96 (144)
T ss_dssp GGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCTT------------HHHHHHTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccCCHhhHHHHHHHHHHHHHhccch------------HHHHHHHHHHHHHHHHHHh
Confidence 355678888888887778899999999999999986321 1245555566777777653
No 99
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=30.58 E-value=5.2e+02 Score=27.55 Aligned_cols=66 Identities=12% Similarity=0.053 Sum_probs=53.5
Q ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhhCCC-CHHHHHHHHHHHHHHHhh
Q psy9795 121 GLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKFGTG-DFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 121 ~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~-d~~~~~~aL~~L~~i~k~ 186 (337)
..++++..+....||.....++..|+..-=|..=+.++|.|+..+.++ .-....+||.++..+++.
T Consensus 98 ~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~ 164 (986)
T 2iw3_A 98 PAICTNAGNKDKEIQSVASETLISIVNAVNPVAIKALLPHLTNAIVETNKWQEKIAILAAFSAMVDA 164 (986)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 344444454557899999999999998876666689999999999765 678899999999999986
No 100
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=30.29 E-value=1.2e+02 Score=22.90 Aligned_cols=44 Identities=11% Similarity=0.199 Sum_probs=24.8
Q ss_pred cCCCCChhhhHHHHHHHHHHHhCC---C-----hHHHHHHHHHhCCCChHHH
Q psy9795 43 HDKNIQLESRSPTENFLESVETNQ---N-----YPLLILTLVERADVDMTIR 86 (337)
Q Consensus 43 ~~~spD~~~Rk~AE~~L~~~~~~p---g-----f~~~Ll~i~~~~~~~~~iR 86 (337)
++.|-=.++|+.|++..+.+.... + .+..|=+|..+++.|.++|
T Consensus 28 ~D~sVPRNIRraA~ea~~~L~~e~~~~~vRAAtAIs~LDeISnDPNmP~htR 79 (94)
T 2qzg_A 28 EDTTVPRNIRAAADNAKNALHNEEQELIVRSATAIQYLDDISEDPNMPIHTR 79 (94)
T ss_dssp TCTTSCHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHTTCTTCCHHHH
T ss_pred cCCCCChHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHhhcCCCCChHHH
Confidence 344455689999998887765421 1 1233334444455555555
No 101
>3d9j_A RNA-binding protein 16; SCAF8, RNA polymerase II CTD interacting domain, arm repeats phospho-CTD, phosphoprotein, transcription; 1.60A {Homo sapiens} PDB: 3d9k_A* 3d9l_A* 3d9m_A* 3d9n_A* 3d9p_A* 3d9i_A 3d9o_A* 2diw_A
Probab=28.30 E-value=47 Score=26.84 Aligned_cols=50 Identities=8% Similarity=-0.005 Sum_probs=36.4
Q ss_pred HHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhhhhhh
Q psy9795 140 DATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSLFKRYRHE 190 (337)
Q Consensus 140 ~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr~~ 190 (337)
..++.+|.. ....-+.++..+.+.+....+....++|+++..|++.++.+
T Consensus 27 ~~LT~~a~~-~~~~~~~IV~~~~~~i~k~~~~~KL~~LYL~DsIvrn~~~k 76 (145)
T 3d9j_A 27 TQITKAAIK-AIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQ 76 (145)
T ss_dssp HHHHHHHHH-TGGGHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHhCCccceeehhhhhHHHHHHhhhh
Confidence 344444442 22345678888888787777888999999999999998764
No 102
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=28.20 E-value=3.9e+02 Score=27.07 Aligned_cols=39 Identities=26% Similarity=0.376 Sum_probs=30.1
Q ss_pred HHHHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhcccccc
Q psy9795 60 ESVETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRN 100 (337)
Q Consensus 60 ~~~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~ 100 (337)
+.+-+.++.+..|+.++.+ .+..+|..|.-.|...+..+
T Consensus 115 d~f~~~~~~i~~Ll~lL~~--~df~vR~~alqlL~~L~~~r 153 (651)
T 3grl_A 115 EIFIKQQENVTLLLSLLEE--FDFHVRWPGVKLLTSLLKQL 153 (651)
T ss_dssp HHHHHSTHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHcCCccHHHHHHHhcC--ccHHHHHHHHHHHHHHHhcC
Confidence 4566778899999999865 47899999987777776553
No 103
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=26.39 E-value=6.1e+02 Score=27.01 Aligned_cols=95 Identities=8% Similarity=0.069 Sum_probs=69.1
Q ss_pred ChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCH-HHHHHHHHHHHHHHhhhCC----CCChH
Q psy9795 82 DMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPE-AIQKQLSDATAIIGKSDFP----DKWPS 156 (337)
Q Consensus 82 ~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~-~Ir~ql~~~i~~Ia~~DfP----~~WPe 156 (337)
...||.+|.-..+-.++. ++++.-..+-..|+..|.++.+ +.+.....++..++..- | ..-|+
T Consensus 108 ~~~v~~aa~~~~~~~~~~-----------~~~~a~~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~-~~~~~~~~~~ 175 (986)
T 2iw3_A 108 DKEIQSVASETLISIVNA-----------VNPVAIKALLPHLTNAIVETNKWQEKIAILAAFSAMVDAA-KDQVALRMPE 175 (986)
T ss_dssp SHHHHHHHHHHHHHHHHH-----------SCGGGHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHS-HHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh-HHHHHHhccc
Confidence 478999998888777755 2333335555677777765543 56666666777777543 4 35799
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHHHHHHhhhh
Q psy9795 157 LITDMVAKFGTGDFHIINGVLHTAHSLFKRYR 188 (337)
Q Consensus 157 Ll~~L~~~l~s~d~~~~~~aL~~L~~i~k~yr 188 (337)
++|.+.+++...-......|..++..+|.-..
T Consensus 176 ~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~ 207 (986)
T 2iw3_A 176 LIPVLSETMWDTKKEVKAAATAAMTKATETVD 207 (986)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCC
T ss_pred hhcchHhhcccCcHHHHHHHHHHHHHHHhcCC
Confidence 99999999988888888899999999998753
No 104
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=25.77 E-value=2.7e+02 Score=28.36 Aligned_cols=108 Identities=12% Similarity=0.027 Sum_probs=68.3
Q ss_pred hHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHcc-----CC---HHHHHHHH
Q psy9795 68 YPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLT-----SP---EAIQKQLS 139 (337)
Q Consensus 68 f~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~-----~~---~~Ir~ql~ 139 (337)
+...|+.=+-+ ..-++|.-||+-||-.++.+=... ......+. --.+|=..+-+|-+ ++ ..||...|
T Consensus 175 fcE~L~~DLFd--p~WEiRHGAALGLREILR~hG~GA-GR~~~~N~--DLAvRLLCVLALDRFGDYVSDqVVAPVRETaA 249 (800)
T 3oc3_A 175 FFEQISDNLLS--YEWYKRHGAFLAFAAMFSEIDNGG-DIQIRVDS--KLFSKIYEILVTDKFNDFVDDRTVAPVRDAAA 249 (800)
T ss_dssp TTHHHHHHTTC--SSHHHHHHHHHHHHHHHHHCC-----CCCCCCT--THHHHHHHHHHHBCCBBCSSSSCBCHHHHHHH
T ss_pred HHHHHHHHhcC--cchhhhhHHHHHHHHHHHHhccCC-ceeccccH--HHHHHHHHHHHhccccccccCeeeeehHHHHH
Confidence 34444333333 357999999999999998863211 00111222 23455444444443 22 47999999
Q ss_pred HHHHHHHhhhCCCCChHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy9795 140 DATAIIGKSDFPDKWPSLITDMVAKFGTGDFHIINGVLHTAHSL 183 (337)
Q Consensus 140 ~~i~~Ia~~DfP~~WPeLl~~L~~~l~s~d~~~~~~aL~~L~~i 183 (337)
.+++.+ .-.|+. -..+..++..+..+.-...+|||..|+.+
T Consensus 250 QtLGaL--~hLp~e-~~IL~qLV~~l~~~~WEVRHGGLLGLKYL 290 (800)
T 3oc3_A 250 YLLSRI--YPLIGP-NDIIEQLVGFLDSGDWQVQFSGLIALGYL 290 (800)
T ss_dssp HHHHHH--TTTSCS-CCHHHHHTTGGGCSCHHHHHHHHHHHHHT
T ss_pred HHHHHH--HhCChh-HHHHHHHHhhcCCCCeeehhhhHHHHHHH
Confidence 999999 445655 34555565555667788999999999988
No 105
>1n6j_G Calcineurin-binding protein cabin 1; MADS-BOX, protein-DNA complex, histone deacetylases, transcription/DNA complex; 2.20A {Homo sapiens}
Probab=25.09 E-value=59 Score=19.33 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=15.2
Q ss_pred CCCCHHHHHHHHHHHHHH
Q psy9795 109 DKIHASDREAIKGLILHL 126 (337)
Q Consensus 109 ~~i~~e~K~~IK~~Ll~~ 126 (337)
..|++|.|+.+|+.|+..
T Consensus 7 gsiseetkqklk~~ils~ 24 (35)
T 1n6j_G 7 GSISEETKQKLKSAILSA 24 (35)
T ss_dssp SCCCHHHHHHHHHHHHTT
T ss_pred CcccHHHHHHHHHHHHhh
Confidence 479999999999888754
No 106
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=23.44 E-value=6.9e+02 Score=26.57 Aligned_cols=117 Identities=14% Similarity=0.062 Sum_probs=78.2
Q ss_pred ChhhhHHHHHHHHH-HHhCCChHHHHHHHHHhCCCChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHH
Q psy9795 48 QLESRSPTENFLES-VETNQNYPLLILTLVERADVDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHL 126 (337)
Q Consensus 48 D~~~Rk~AE~~L~~-~~~~pgf~~~Ll~i~~~~~~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~ 126 (337)
+..+|+.|=--|-- .-..++....+++.+... .++.+|..|+..+==- .-...+ ...|+ .|+..
T Consensus 521 ~e~vrR~aalgLGll~~g~~e~~~~li~~L~~~-~dp~vRygaa~alglA--yaGTGn-----------~~aIq-~LL~~ 585 (963)
T 4ady_A 521 HGNITRGLAVGLALINYGRQELADDLITKMLAS-DESLLRYGGAFTIALA--YAGTGN-----------NSAVK-RLLHV 585 (963)
T ss_dssp CHHHHHHHHHHHHHHTTTCGGGGHHHHHHHHHC-SCHHHHHHHHHHHHHH--TTTSCC-----------HHHHH-HHHHH
T ss_pred cHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhC-CCHHHHHHHHHHHHHH--hcCCCC-----------HHHHH-HHHHH
Confidence 44677777777764 345777888899988874 4789999988766211 111100 12333 45555
Q ss_pred Hcc-CCHHHHHHHHHHHHHHHhhhCCCCChHHHHHHHHhh-CCCCHHHHHHHHHHHHHHH
Q psy9795 127 MLT-SPEAIQKQLSDATAIIGKSDFPDKWPSLITDMVAKF-GTGDFHIINGVLHTAHSLF 184 (337)
Q Consensus 127 L~~-~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~L~~~l-~s~d~~~~~~aL~~L~~i~ 184 (337)
+.+ .+..||.....+++.|+-.+ |+.++.+++.+ ++.|+..++++-.+|..++
T Consensus 586 ~~~d~~d~VRraAViaLGlI~~g~-----~e~v~rlv~~L~~~~d~~VR~gAalALGli~ 640 (963)
T 4ady_A 586 AVSDSNDDVRRAAVIALGFVLLRD-----YTTVPRIVQLLSKSHNAHVRCGTAFALGIAC 640 (963)
T ss_dssp HHHCSCHHHHHHHHHHHHHHTSSS-----CSSHHHHTTTGGGCSCHHHHHHHHHHHHHHT
T ss_pred hccCCcHHHHHHHHHHHHhhccCC-----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhc
Confidence 554 56789988888888887655 35677777755 4568888888888887764
No 107
>3dwl_F Actin-related protein 2/3 complex subunit 4; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=22.90 E-value=37 Score=28.21 Aligned_cols=43 Identities=21% Similarity=0.236 Sum_probs=27.1
Q ss_pred CchhHhhhccchh------hHHHHHHhhccc-CCCCChhhhHHHHHHHHHH
Q psy9795 19 TNQCLEDMCDRNG------EFFCSTQGVPNH-DKNIQLESRSPTENFLESV 62 (337)
Q Consensus 19 ~~~~~~~~~~~~~------~~~~~l~~tL~~-~~spD~~~Rk~AE~~L~~~ 62 (337)
||.|+|.|-- +. +|..-+..-.+. -++-++-.|..||++|+++
T Consensus 119 tn~H~e~m~k-~kLvdFIi~FmeevdkeIsemKl~lnaRaR~~A~~fl~~f 168 (168)
T 3dwl_F 119 TNYHTEEMLK-HKLVDFIIEFMEEVDAEISEMKLFLNGRARLVAETYLSCF 168 (168)
T ss_dssp ETTHHHHSCH-HHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7899999976 33 345544443333 2444566777888888763
No 108
>1xgw_A Epsin 4; ENTH, enthoprotin, clathrin-associated, endocytosis; 1.90A {Homo sapiens} PDB: 2qy7_A 2v8s_E
Probab=22.18 E-value=2e+02 Score=24.11 Aligned_cols=46 Identities=15% Similarity=0.298 Sum_probs=36.1
Q ss_pred HHHHHHhhhCC-CCChHHHHHHHHhh-CC--CCHHHHHHHHHHHHHHHhh
Q psy9795 141 ATAIIGKSDFP-DKWPSLITDMVAKF-GT--GDFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 141 ~i~~Ia~~DfP-~~WPeLl~~L~~~l-~s--~d~~~~~~aL~~L~~i~k~ 186 (337)
.+..||..-|- ..+++.++.|...+ +. .+-..++-+|.+|..+++.
T Consensus 54 ~m~eIa~~T~~~~~~~~Im~~L~kRl~~~~~k~WR~vyKaL~LLeYLl~n 103 (176)
T 1xgw_A 54 LMGEIAKATFMYEQFPELMNMLWSRMLKDNKKNWRRVYKSLLLLAYLIRN 103 (176)
T ss_dssp HHHHHHHHTTCTTTHHHHHHHHHHHHHSSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHh
Confidence 45567665554 67899999998885 53 3778899999999999996
No 109
>1eyh_A Epsin; superhelix of helices, cell cycle; 1.56A {Rattus norvegicus} SCOP: a.118.9.1 PDB: 1h0a_A* 1edu_A
Probab=21.57 E-value=1.2e+02 Score=24.45 Aligned_cols=45 Identities=7% Similarity=0.185 Sum_probs=34.1
Q ss_pred HHHHHhhhCC-CCChHHHHHHHHhhCCC--CHHHHHHHHHHHHHHHhh
Q psy9795 142 TAIIGKSDFP-DKWPSLITDMVAKFGTG--DFHIINGVLHTAHSLFKR 186 (337)
Q Consensus 142 i~~Ia~~DfP-~~WPeLl~~L~~~l~s~--d~~~~~~aL~~L~~i~k~ 186 (337)
+..||..-|- ...++.++.|...+.+. +-..++-+|.+|..+++.
T Consensus 26 m~eIa~~T~~~~~~~~Im~~l~kRL~d~~k~Wr~vyKaL~lleyLl~n 73 (144)
T 1eyh_A 26 MSEIADLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAMTLMEYLIKT 73 (144)
T ss_dssp HHHHHHHTTSHHHHHHHHHHHHHHHSCCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHhhHHHHHHHHHHHHccCCcchHHHhHHHHHHHHHHHh
Confidence 4555554443 46778888888888765 567899999999999986
No 110
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=21.33 E-value=3.8e+02 Score=24.82 Aligned_cols=91 Identities=13% Similarity=0.039 Sum_probs=64.4
Q ss_pred CChHHHHHHHHHHhccccccCcccCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhhCCCCChHHHHH
Q psy9795 81 VDMTIRIAGAVAFKNYVKRNWPLVEDEPDKIHASDREAIKGLILHLMLTSPEAIQKQLSDATAIIGKSDFPDKWPSLITD 160 (337)
Q Consensus 81 ~~~~iRq~AaI~LKN~V~~~W~~~~~~~~~i~~e~K~~IK~~Ll~~L~~~~~~Ir~ql~~~i~~Ia~~DfP~~WPeLl~~ 160 (337)
.+...|.+.-.|++++-+. .++ .+ .+=+.|..=+.+.++.+|... |+.+++.--|+--+.+.+.
T Consensus 80 ~d~~lKrLvYLyl~~~~~~----~~e---~i------Lv~Nsl~kDl~~~N~~iR~lA---LRtL~~I~~~~m~~~l~~~ 143 (355)
T 3tjz_B 80 NDPTLRRMCYLTIKEMSCI----AED---VI------IVTSSLTKDMTGKEDSYRGPA---VRALCQITDSTMLQAIERY 143 (355)
T ss_dssp CCHHHHHHHHHHHHHHTTT----SSC---GG------GGHHHHHHHHHSSCHHHHHHH---HHHHHHHCCTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCC----HHH---HH------HHHHHHHhhcCCCcHhHHHHH---HHHHhcCCCHHHHHHHHHH
Confidence 4789999999999987554 111 11 233444555566667777544 4444444445567889999
Q ss_pred HHHhhCCCCHHHHHHHHHHHHHHHhhh
Q psy9795 161 MVAKFGTGDFHIINGVLHTAHSLFKRY 187 (337)
Q Consensus 161 L~~~l~s~d~~~~~~aL~~L~~i~k~y 187 (337)
+.+++.+.++-....|+.|...++...
T Consensus 144 lk~~L~d~~pyVRk~A~l~~~kL~~~~ 170 (355)
T 3tjz_B 144 MKQAIVDKVPSVSSSALVSSLHLLKCS 170 (355)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHTTTC
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999888764
Done!