Query psy9802
Match_columns 92
No_of_seqs 100 out of 113
Neff 4.1
Searched_HMMs 13730
Date Fri Aug 16 20:05:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9802.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9802hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t98a2 a.47.6.1 (A:119-281) C 41.6 45 0.0033 22.3 6.9 55 22-76 42-101 (163)
2 d1fxka_ a.2.5.1 (A:) Prefoldin 35.0 34 0.0025 20.2 4.6 39 21-59 58-96 (107)
3 d1sdia_ a.198.1.1 (A:) Hypothe 35.0 19 0.0014 24.9 3.8 71 8-78 48-119 (213)
4 d1nkpa_ a.38.1.1 (A:) Myc prot 32.4 41 0.0029 19.1 4.6 44 34-77 7-59 (88)
5 d1l0oc_ a.4.13.2 (C:) SigmaF { 30.9 30 0.0022 18.5 3.5 39 21-61 3-44 (57)
6 d1o57a1 a.4.5.40 (A:2-74) N-te 30.4 30 0.0022 20.4 3.6 41 14-54 13-53 (73)
7 d1t98a2 a.47.6.1 (A:119-281) C 27.8 80 0.0058 21.0 6.6 33 27-59 73-105 (163)
8 d1rmja_ g.28.1.1 (A:) Insulin- 27.3 14 0.00099 23.2 1.7 24 64-92 33-56 (107)
9 d1wa8a1 a.25.3.1 (A:1-99) ESAT 20.7 69 0.0051 17.8 6.2 40 22-61 3-45 (99)
10 d1dlya_ a.1.1.1 (A:) Protozoan 20.2 75 0.0055 18.0 5.3 42 41-82 77-118 (121)
11 d1xoub_ a.231.1.2 (B:) EspA ch 20.1 84 0.0061 18.5 6.3 31 27-57 10-43 (84)
No 1
>d1t98a2 a.47.6.1 (A:119-281) Chromosome partition protein MukF (KicB), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=41.63 E-value=45 Score=22.31 Aligned_cols=55 Identities=22% Similarity=0.229 Sum_probs=37.1
Q ss_pred ccccHHHHhHHHHHhhhHHHHhHHHHHHHHHHHHH-----HhhhhHHHHHHHHHHHHhhh
Q psy9802 22 LKVPYEILNKKFRAVQKTIDREVSYVQSAANELEK-----TIASSAQVLAKNLEVLFILQ 76 (92)
Q Consensus 22 LRVPyE~LrK~FRs~QK~IErE~~~V~~~l~el~k-----~ls~~~a~Ldsl~srl~gLK 76 (92)
||.....+=-..--.||.+|..-..|+..++++-+ +.++|..-|+.....||.|.
T Consensus 42 LkySVaeifd~Idl~QR~mDeQQ~~Vk~eIA~LL~qdW~~AI~~Ce~LL~eTs~tLRELq 101 (163)
T d1t98a2 42 LKYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQ 101 (163)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeHHHHHhhhhHHHHhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhHHHHH
Confidence 45666666666667788888888888888877765 35666655666655555543
No 2
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=35.04 E-value=34 Score=20.16 Aligned_cols=39 Identities=10% Similarity=0.226 Sum_probs=32.2
Q ss_pred cccccHHHHhHHHHHhhhHHHHhHHHHHHHHHHHHHHhh
Q psy9802 21 TLKVPYEILNKKFRAVQKTIDREVSYVQSAANELEKTIA 59 (92)
Q Consensus 21 lLRVPyE~LrK~FRs~QK~IErE~~~V~~~l~el~k~ls 59 (92)
+++.|.+.+......-...|+.++..+.+...++.+.+.
T Consensus 58 Lv~~~~~e~~~~l~~~~e~l~~~i~~l~~q~~~l~~~l~ 96 (107)
T d1fxka_ 58 LIRVAKDELTEELQEKLETLQLREKTIERQEERVMKKLQ 96 (107)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577888999999888888888888888888888877544
No 3
>d1sdia_ a.198.1.1 (A:) Hypothetical protein YcfC {Escherichia coli [TaxId: 562]}
Probab=34.96 E-value=19 Score=24.86 Aligned_cols=71 Identities=18% Similarity=0.151 Sum_probs=52.6
Q ss_pred cCCcchhhhhhcccccccHHHHhHHHHHhh-hHHHHhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhHh
Q psy9802 8 SHDYIFILCLEHSTLKVPYEILNKKFRAVQ-KTIDREVSYVQSAANELEKTIASSAQVLAKNLEVLFILQRW 78 (92)
Q Consensus 8 s~~~~~~l~LE~plLRVPyE~LrK~FRs~Q-K~IErE~~~V~~~l~el~k~ls~~~a~Ldsl~srl~gLKR~ 78 (92)
+.+.++++--+..-|++=++.|..-+-... ...+.|+..-.-++-.+++.+++.++.++.+-+|+..++|=
T Consensus 48 ~~s~~~vyg~~~~nL~~Gl~~L~~~L~~~~~~~~~~e~~RY~~sl~~LerkL~k~~~~l~~l~~ri~~~~~q 119 (213)
T d1sdia_ 48 PSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSAKGALDTLGNRINGLQRQ 119 (213)
T ss_dssp CSSHHHHTTSCGGGGHHHHHHHHHHHHCCCSSSHHHHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHTTHHH
T ss_pred CCCHHHHHCCcHHHHHHHHHHHHHHhcCCCcccccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 334444442233357888898888874332 34578888888889999999999888999999999988875
No 4
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.39 E-value=41 Score=19.07 Aligned_cols=44 Identities=16% Similarity=0.252 Sum_probs=28.8
Q ss_pred HHhhhHHHHh-HHHHHHHHHHHHHHhhhh--------HHHHHHHHHHHHhhhH
Q psy9802 34 RAVQKTIDRE-VSYVQSAANELEKTIASS--------AQVLAKNLEVLFILQR 77 (92)
Q Consensus 34 Rs~QK~IErE-~~~V~~~l~el~k~ls~~--------~a~Ldsl~srl~gLKR 77 (92)
|.+|..+||. -..+...+.+|.+.+.+. .++|...++-++-|+.
T Consensus 7 R~~Hn~~Er~RR~~in~~f~~Lr~llP~~~~~~k~sK~~iL~~A~~yI~~L~~ 59 (88)
T d1nkpa_ 7 RRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQA 59 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCccCHHHHHHHHHHHHHHHHH
Confidence 5678888888 677888888887654321 1256666666665553
No 5
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.92 E-value=30 Score=18.48 Aligned_cols=39 Identities=23% Similarity=0.338 Sum_probs=23.4
Q ss_pred ccccc---HHHHhHHHHHhhhHHHHhHHHHHHHHHHHHHHhhhh
Q psy9802 21 TLKVP---YEILNKKFRAVQKTIDREVSYVQSAANELEKTIASS 61 (92)
Q Consensus 21 lLRVP---yE~LrK~FRs~QK~IErE~~~V~~~l~el~k~ls~~ 61 (92)
++||| .|.++| .+.+++.++.+... ..+..|++..+.-+
T Consensus 3 ~IrvPr~~~e~~~k-i~~~~~~l~q~lgR-ePT~~EiA~~l~~~ 44 (57)
T d1l0oc_ 3 TVKVSRSLKEMGNK-IRKAKDELSKTRGR-APTVTEIADHLGIS 44 (57)
T ss_dssp CCTTHHHHHHHHHH-HHHHHHHHHHHHTS-CCBHHHHHHHHTSC
T ss_pred CEeCcHHHHHHHHH-HHHHHHHHHHHcCC-CCCHHHHHHHHCcC
Confidence 46777 344444 44556666666655 55567777766544
No 6
>d1o57a1 a.4.5.40 (A:2-74) N-terminal domain of Bacillus PurR {Bacillus subtilis [TaxId: 1423]}
Probab=30.43 E-value=30 Score=20.40 Aligned_cols=41 Identities=10% Similarity=0.353 Sum_probs=36.7
Q ss_pred hhhhhcccccccHHHHhHHHHHhhhHHHHhHHHHHHHHHHH
Q psy9802 14 ILCLEHSTLKVPYEILNKKFRAVQKTIDREVSYVQSAANEL 54 (92)
Q Consensus 14 ~l~LE~plLRVPyE~LrK~FRs~QK~IErE~~~V~~~l~el 54 (92)
..++|+|---+|...+-..|-+|.-+|--|+..|..++.+.
T Consensus 13 ~~L~~~P~~li~L~~F~e~~~~AKSsISEDl~iik~~~~~~ 53 (73)
T d1o57a1 13 NYLLTHPHELIPLTFFSERYESAKSSISEDLTIIKQTFEQQ 53 (73)
T ss_dssp HHHHTSTTCCBCHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCceEcHHHHHHHhchhhchhhhHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999888754
No 7
>d1t98a2 a.47.6.1 (A:119-281) Chromosome partition protein MukF (KicB), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.80 E-value=80 Score=21.01 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=20.1
Q ss_pred HHHhHHHHHhhhHHHHhHHHHHHHHHHHHHHhh
Q psy9802 27 EILNKKFRAVQKTIDREVSYVQSAANELEKTIA 59 (92)
Q Consensus 27 E~LrK~FRs~QK~IErE~~~V~~~l~el~k~ls 59 (92)
++|++..|++--+-|.=++....++.|+...+.
T Consensus 73 ~LL~qdW~~AI~~Ce~LL~eTs~tLRELqdtL~ 105 (163)
T d1t98a2 73 QLLNKDWRAAISSCELLLSETSGTLRELQDTLE 105 (163)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 457777776666666655555566666655433
No 8
>d1rmja_ g.28.1.1 (A:) Insulin-like growth factor binding protein 6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.32 E-value=14 Score=23.17 Aligned_cols=24 Identities=21% Similarity=0.221 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhhhHhhhhhccCCccccCC
Q psy9802 64 VLAKNLEVLFILQRWKLWRNENLGFYIPR 92 (92)
Q Consensus 64 ~Ldsl~srl~gLKR~~~~~~~~~~~~~~~ 92 (92)
.|++++++|+...+ ....|+|||.
T Consensus 33 el~~vl~~l~~~~~-----~~~~~~fiP~ 56 (107)
T d1rmja_ 33 HLDSVLQQLQTEVY-----RGAQTLYVPN 56 (107)
T ss_dssp HHHHHHHHHHHHST-----TTSSEEEEEC
T ss_pred HHHHHHHHHHhccc-----cCCCCcCCcC
Confidence 57777776666554 3456888884
No 9
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.70 E-value=69 Score=17.79 Aligned_cols=40 Identities=18% Similarity=0.325 Sum_probs=29.5
Q ss_pred ccccHHHHhH---HHHHhhhHHHHhHHHHHHHHHHHHHHhhhh
Q psy9802 22 LKVPYEILNK---KFRAVQKTIDREVSYVQSAANELEKTIASS 61 (92)
Q Consensus 22 LRVPyE~LrK---~FRs~QK~IErE~~~V~~~l~el~k~ls~~ 61 (92)
+||-+|.|+. .|+.....|+..+..+...+..+...-.|+
T Consensus 3 ikvd~~~l~~~A~~~~~~~~~l~~~l~~l~~~v~~l~~~W~G~ 45 (99)
T d1wa8a1 3 MKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGA 45 (99)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 5677777764 677888888888888888888887654443
No 10
>d1dlya_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Green alga (Chlamydomonas eugametos) [TaxId: 3054]}
Probab=20.20 E-value=75 Score=17.97 Aligned_cols=42 Identities=10% Similarity=0.032 Sum_probs=31.5
Q ss_pred HHhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhHhhhhh
Q psy9802 41 DREVSYVQSAANELEKTIASSAQVLAKNLEVLFILQRWKLWR 82 (92)
Q Consensus 41 ErE~~~V~~~l~el~k~ls~~~a~Ldsl~srl~gLKR~~~~~ 82 (92)
+.+...+...+.++.+.+..+.+.++.+++++..+|.+-.-+
T Consensus 77 ~~~f~~~~~~l~~al~~~~v~~~~~~e~~~~~~~~r~~ivn~ 118 (121)
T d1dlya_ 77 DVHFQAVARHLSDTLTELGVPPEDITDAMAVVASTRTEVLNM 118 (121)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 556667777777776666677778999999999998875544
No 11
>d1xoub_ a.231.1.2 (B:) EspA chaperone CesA {Escherichia coli [TaxId: 562]}
Probab=20.07 E-value=84 Score=18.52 Aligned_cols=31 Identities=39% Similarity=0.508 Sum_probs=19.3
Q ss_pred HHHhHHHHHhh---hHHHHhHHHHHHHHHHHHHH
Q psy9802 27 EILNKKFRAVQ---KTIDREVSYVQSAANELEKT 57 (92)
Q Consensus 27 E~LrK~FRs~Q---K~IErE~~~V~~~l~el~k~ 57 (92)
|+|-|..|+-- |-|=.|+..|...++.+...
T Consensus 10 elldkkirseie~ikkiiaefdvvkenvn~lsek 43 (84)
T d1xoub_ 10 ELLDKKIRSEIEAIKKIIAEFDVVKESVNELSEK 43 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777643 33445777777777776543
Done!