Query psy9807
Match_columns 561
No_of_seqs 350 out of 2955
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 20:12:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9807.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9807hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0628|consensus 100.0 1.2E-91 2.7E-96 694.0 40.5 471 17-556 1-475 (511)
2 PLN02590 probable tyrosine dec 100.0 1.6E-89 3.4E-94 730.5 48.2 469 16-556 53-536 (539)
3 PLN02880 tyrosine decarboxylas 100.0 2.1E-84 4.5E-89 692.3 48.4 469 16-556 9-488 (490)
4 TIGR03799 NOD_PanD_pyr putativ 100.0 1.6E-70 3.4E-75 586.2 43.7 468 20-545 22-518 (522)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 1.9E-71 4.1E-76 574.3 31.5 367 51-426 1-373 (373)
6 TIGR03811 tyr_de_CO2_Ent tyros 100.0 3.9E-65 8.5E-70 547.8 45.7 502 7-554 5-604 (608)
7 KOG0629|consensus 100.0 1.2E-65 2.5E-70 503.4 27.9 465 20-552 31-509 (510)
8 COG0076 GadB Glutamate decarbo 100.0 1.3E-55 2.9E-60 463.1 36.3 439 33-553 4-450 (460)
9 TIGR01788 Glu-decarb-GAD gluta 100.0 4.1E-54 8.8E-59 451.3 39.5 399 59-553 14-430 (431)
10 PLN02263 serine decarboxylase 100.0 4.3E-54 9.3E-59 447.2 36.5 310 68-424 74-397 (470)
11 PLN03032 serine decarboxylase; 100.0 3E-46 6.5E-51 384.0 33.4 310 69-424 8-330 (374)
12 PRK02769 histidine decarboxyla 100.0 2.2E-45 4.8E-50 380.5 35.5 306 70-423 8-326 (380)
13 cd06450 DOPA_deC_like DOPA dec 100.0 7E-42 1.5E-46 354.0 33.4 340 92-548 1-344 (345)
14 PRK13520 L-tyrosine decarboxyl 100.0 5.7E-32 1.2E-36 282.8 34.9 365 67-551 2-370 (371)
15 COG0520 csdA Selenocysteine ly 100.0 8.7E-32 1.9E-36 280.2 32.9 348 91-551 24-404 (405)
16 TIGR03812 tyr_de_CO2_Arch tyro 100.0 7.9E-31 1.7E-35 274.4 35.6 364 69-548 2-372 (373)
17 KOG1383|consensus 100.0 7.4E-30 1.6E-34 255.3 31.3 386 59-558 53-452 (491)
18 COG1104 NifS Cysteine sulfinat 100.0 4.1E-29 8.8E-34 250.7 31.7 342 90-555 2-380 (386)
19 TIGR00461 gcvP glycine dehydro 100.0 1.3E-26 2.9E-31 257.5 37.4 380 68-555 467-870 (939)
20 PRK05367 glycine dehydrogenase 100.0 1.9E-26 4.1E-31 260.9 37.0 381 67-555 478-878 (954)
21 PRK10874 cysteine sulfinate de 100.0 1.2E-25 2.5E-30 237.6 32.6 351 90-552 20-398 (401)
22 TIGR01977 am_tr_V_EF2568 cyste 100.0 8.1E-26 1.8E-30 236.8 30.9 311 127-548 42-375 (376)
23 PLN02651 cysteine desulfurase 100.0 5.6E-26 1.2E-30 236.9 28.8 285 92-425 2-302 (364)
24 PRK09295 bifunctional cysteine 99.9 1.3E-25 2.8E-30 237.6 31.5 351 90-551 24-403 (406)
25 PRK04366 glycine dehydrogenase 99.9 3.1E-25 6.7E-30 238.2 34.6 387 61-557 45-453 (481)
26 TIGR01979 sufS cysteine desulf 99.9 2.3E-25 5E-30 235.5 32.8 351 91-553 20-402 (403)
27 TIGR03402 FeS_nifS cysteine de 99.9 2.2E-25 4.9E-30 233.7 32.1 273 92-416 2-284 (379)
28 TIGR03392 FeS_syn_CsdA cystein 99.9 2.4E-25 5.2E-30 235.0 31.9 351 90-552 17-395 (398)
29 cd06453 SufS_like Cysteine des 99.9 4.9E-25 1.1E-29 230.6 31.5 294 92-423 2-312 (373)
30 PF00266 Aminotran_5: Aminotra 99.9 9.9E-25 2.1E-29 228.1 31.2 285 92-414 2-301 (371)
31 TIGR02006 IscS cysteine desulf 99.9 2.5E-25 5.3E-30 235.0 26.6 277 90-415 4-290 (402)
32 TIGR03531 selenium_SpcS O-phos 99.9 1.2E-24 2.6E-29 227.6 29.1 244 123-415 99-355 (444)
33 PLN02855 Bifunctional selenocy 99.9 7.4E-24 1.6E-28 225.4 32.2 353 90-553 33-419 (424)
34 PRK00451 glycine dehydrogenase 99.9 2.9E-23 6.3E-28 222.4 32.8 378 51-549 32-445 (447)
35 KOG1549|consensus 99.9 7.8E-24 1.7E-28 213.3 25.5 209 86-332 40-257 (428)
36 cd06451 AGAT_like Alanine-glyo 99.9 1.5E-23 3.3E-28 217.9 28.4 341 94-550 2-355 (356)
37 TIGR03403 nifS_epsilon cystein 99.9 8.6E-23 1.9E-27 214.3 34.0 275 92-416 2-287 (382)
38 PRK02948 cysteine desulfurase; 99.9 2.5E-23 5.3E-28 218.4 29.6 346 92-555 3-377 (381)
39 TIGR01814 kynureninase kynuren 99.9 1.2E-22 2.7E-27 214.7 32.2 349 88-550 26-405 (406)
40 PLN02409 serine--glyoxylate am 99.9 8.1E-23 1.7E-27 215.5 27.6 322 123-552 36-372 (401)
41 PRK14012 cysteine desulfurase; 99.9 5.5E-23 1.2E-27 217.3 26.4 276 90-414 4-291 (404)
42 TIGR01976 am_tr_V_VC1184 cyste 99.9 5.6E-22 1.2E-26 209.3 31.0 339 91-546 19-397 (397)
43 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.7E-21 3.8E-26 204.5 34.4 310 130-552 64-381 (387)
44 COG0156 BioF 7-keto-8-aminopel 99.9 7.1E-22 1.5E-26 202.2 28.4 334 84-549 41-387 (388)
45 COG0075 Serine-pyruvate aminot 99.9 4.3E-22 9.3E-27 201.8 26.3 321 122-553 31-364 (383)
46 TIGR02326 transamin_PhnW 2-ami 99.9 5.5E-22 1.2E-26 206.8 28.0 321 124-550 30-360 (363)
47 cd00613 GDC-P Glycine cleavage 99.9 1.7E-21 3.7E-26 205.7 31.5 313 124-546 59-398 (398)
48 PRK03080 phosphoserine aminotr 99.9 1.1E-21 2.5E-26 205.0 27.2 315 122-553 41-374 (378)
49 COG2008 GLY1 Threonine aldolas 99.9 6.6E-22 1.4E-26 194.7 22.6 303 117-550 27-341 (342)
50 TIGR03235 DNA_S_dndA cysteine 99.9 5.8E-21 1.3E-25 198.3 28.6 277 92-416 1-288 (353)
51 PLN02414 glycine dehydrogenase 99.9 8.7E-21 1.9E-25 214.0 31.1 326 125-555 564-910 (993)
52 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 9.8E-21 2.1E-25 196.5 29.3 341 96-549 4-354 (355)
53 PLN02724 Molybdenum cofactor s 99.9 6.6E-21 1.4E-25 216.3 29.9 305 90-428 35-394 (805)
54 PTZ00094 serine hydroxymethylt 99.9 4.8E-21 1E-25 204.8 25.3 239 123-414 74-328 (452)
55 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.3E-19 2.8E-24 188.8 33.5 306 132-550 47-360 (361)
56 KOG1368|consensus 99.9 6.1E-21 1.3E-25 180.7 20.5 302 118-547 49-363 (384)
57 PRK13479 2-aminoethylphosphona 99.9 5.2E-20 1.1E-24 192.3 29.9 322 124-552 32-363 (368)
58 PRK12566 glycine dehydrogenase 99.9 1.2E-19 2.5E-24 201.1 32.2 389 66-555 478-879 (954)
59 cd00611 PSAT_like Phosphoserin 99.9 5.9E-20 1.3E-24 190.6 25.4 332 95-549 3-353 (355)
60 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.1E-18 2.3E-23 182.4 32.4 307 132-552 54-368 (370)
61 PRK07179 hypothetical protein; 99.9 4.2E-19 9.1E-24 187.9 29.2 329 87-552 59-398 (407)
62 PLN02721 threonine aldolase 99.8 6.6E-19 1.4E-23 182.8 28.2 305 121-551 36-351 (353)
63 PRK05355 3-phosphoserine/phosp 99.8 4.4E-19 9.6E-24 183.8 23.3 304 122-551 41-357 (360)
64 TIGR01364 serC_1 phosphoserine 99.8 9.5E-19 2.1E-23 180.4 25.3 305 123-551 31-347 (349)
65 TIGR01366 serC_3 phosphoserine 99.8 8.6E-19 1.9E-23 181.9 24.6 312 122-552 34-360 (361)
66 cd00609 AAT_like Aspartate ami 99.8 3.6E-18 7.9E-23 176.4 28.8 316 112-547 23-349 (350)
67 cd06502 TA_like Low-specificit 99.8 1E-18 2.2E-23 180.3 24.3 242 130-424 33-282 (338)
68 PRK13580 serine hydroxymethylt 99.8 1.6E-18 3.4E-23 181.8 25.4 327 121-553 87-446 (493)
69 TIGR01822 2am3keto_CoA 2-amino 99.8 1.1E-17 2.5E-22 176.2 31.0 296 131-552 85-389 (393)
70 PLN02955 8-amino-7-oxononanoat 99.8 1.2E-17 2.7E-22 174.9 30.5 300 130-553 148-462 (476)
71 PRK05937 8-amino-7-oxononanoat 99.8 1.4E-17 3.1E-22 173.9 29.9 335 84-553 6-351 (370)
72 TIGR01437 selA_rel uncharacter 99.8 2E-17 4.4E-22 171.9 30.0 240 128-415 44-290 (363)
73 cd06454 KBL_like KBL_like; thi 99.8 2.5E-17 5.4E-22 170.6 29.8 296 128-549 45-348 (349)
74 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.2E-17 2.6E-22 173.2 27.0 239 122-415 15-259 (352)
75 PRK13034 serine hydroxymethylt 99.8 1.9E-17 4E-22 175.1 28.2 241 124-422 69-320 (416)
76 KOG2862|consensus 99.8 2.5E-17 5.5E-22 157.3 25.8 340 95-551 21-381 (385)
77 TIGR01821 5aminolev_synth 5-am 99.8 3.8E-17 8.3E-22 172.7 29.2 295 132-553 93-397 (402)
78 PLN03226 serine hydroxymethylt 99.8 2.5E-17 5.5E-22 175.7 27.5 260 123-423 74-349 (475)
79 PRK09064 5-aminolevulinate syn 99.8 4.8E-17 1E-21 172.2 29.2 299 124-553 90-398 (407)
80 PLN02483 serine palmitoyltrans 99.8 9.9E-17 2.1E-21 172.6 31.5 343 84-553 102-467 (489)
81 PLN02822 serine palmitoyltrans 99.8 1.9E-16 4E-21 170.1 33.2 310 128-555 153-480 (481)
82 cd00378 SHMT Serine-glycine hy 99.8 2.3E-17 4.9E-22 174.5 25.8 246 123-424 59-315 (402)
83 KOG0630|consensus 99.8 1.6E-17 3.5E-22 166.5 22.6 401 126-558 162-700 (838)
84 PRK00011 glyA serine hydroxyme 99.8 1E-16 2.3E-21 170.2 27.2 234 124-414 66-308 (416)
85 PRK13392 5-aminolevulinate syn 99.8 5.5E-16 1.2E-20 164.3 30.1 294 133-553 95-398 (410)
86 PRK13393 5-aminolevulinate syn 99.8 6.4E-16 1.4E-20 163.5 29.4 297 130-553 91-397 (406)
87 COG1168 MalY Bifunctional PLP- 99.7 4.3E-16 9.3E-21 154.1 24.7 324 106-550 43-384 (388)
88 PRK05958 8-amino-7-oxononanoat 99.7 1.1E-15 2.4E-20 160.4 29.3 292 129-549 84-384 (385)
89 PRK15029 arginine decarboxylas 99.7 2.7E-16 5.8E-21 173.4 25.0 230 130-409 206-466 (755)
90 PRK06939 2-amino-3-ketobutyrat 99.7 1.7E-15 3.7E-20 159.8 29.8 302 127-552 85-393 (397)
91 PLN03227 serine palmitoyltrans 99.7 3.3E-15 7E-20 156.9 31.5 313 121-554 39-384 (392)
92 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 6.2E-17 1.4E-21 166.9 17.2 234 130-418 67-331 (417)
93 PRK08361 aspartate aminotransf 99.7 1.9E-15 4E-20 159.2 28.4 259 104-415 49-320 (391)
94 cd00615 Orn_deC_like Ornithine 99.7 1.5E-16 3.3E-21 160.8 18.6 225 130-405 60-293 (294)
95 PLN02414 glycine dehydrogenase 99.7 3.6E-15 7.8E-20 168.9 31.2 355 60-548 76-465 (993)
96 cd00614 CGS_like CGS_like: Cys 99.7 6.9E-16 1.5E-20 161.0 23.5 219 123-413 38-263 (369)
97 PRK06108 aspartate aminotransf 99.7 5.8E-15 1.3E-19 155.0 29.5 258 106-415 42-313 (382)
98 PRK05764 aspartate aminotransf 99.7 7.9E-15 1.7E-19 154.6 30.4 329 105-552 48-391 (393)
99 KOG1359|consensus 99.7 3.7E-15 7.9E-20 141.3 24.6 293 128-552 111-412 (417)
100 PRK07504 O-succinylhomoserine 99.7 4.6E-15 1E-19 155.9 27.9 219 123-412 63-287 (398)
101 TIGR01825 gly_Cac_T_rel pyrido 99.7 1.1E-14 2.4E-19 153.1 30.5 300 126-552 75-381 (385)
102 TIGR01328 met_gam_lyase methio 99.7 2.9E-15 6.4E-20 157.0 25.8 223 121-413 55-283 (391)
103 PLN02452 phosphoserine transam 99.7 2.1E-15 4.5E-20 155.7 24.2 339 90-551 6-362 (365)
104 PRK05367 glycine dehydrogenase 99.7 1.7E-14 3.7E-19 164.2 33.4 355 61-547 53-437 (954)
105 PRK06767 methionine gamma-lyas 99.7 2.8E-15 6E-20 157.2 24.2 220 123-414 59-285 (386)
106 PRK13238 tnaA tryptophanase/L- 99.7 2.4E-14 5.2E-19 152.6 31.5 192 108-337 61-279 (460)
107 PRK08134 O-acetylhomoserine am 99.7 7.3E-15 1.6E-19 155.4 26.9 236 122-413 61-319 (433)
108 PLN02271 serine hydroxymethylt 99.7 4.3E-15 9.3E-20 156.5 24.4 261 122-423 187-470 (586)
109 PRK08861 cystathionine gamma-s 99.7 9.6E-15 2.1E-19 152.3 26.6 223 119-413 47-276 (388)
110 PRK08133 O-succinylhomoserine 99.7 1.5E-14 3.2E-19 151.8 27.9 221 121-413 57-283 (390)
111 TIGR00858 bioF 8-amino-7-oxono 99.7 1.7E-14 3.8E-19 149.9 28.3 288 131-546 63-359 (360)
112 TIGR01329 cysta_beta_ly_E cyst 99.7 6.9E-15 1.5E-19 153.6 24.9 215 123-410 45-266 (378)
113 TIGR01324 cysta_beta_ly_B cyst 99.7 6.5E-15 1.4E-19 153.4 24.6 218 121-411 46-270 (377)
114 KOG1360|consensus 99.7 1E-14 2.2E-19 143.6 24.2 300 124-553 215-525 (570)
115 PRK05613 O-acetylhomoserine am 99.7 7.9E-15 1.7E-19 155.0 25.2 238 123-412 67-327 (437)
116 TIGR01141 hisC histidinol-phos 99.7 1.8E-14 3.9E-19 149.2 27.5 282 133-547 58-346 (346)
117 TIGR03588 PseC UDP-4-keto-6-de 99.7 3E-14 6.4E-19 149.5 29.3 249 122-415 26-286 (380)
118 PF01212 Beta_elim_lyase: Beta 99.7 1.7E-16 3.6E-21 158.5 11.2 254 113-423 17-285 (290)
119 TIGR01365 serC_2 phosphoserine 99.7 6E-15 1.3E-19 152.4 22.8 339 101-550 14-371 (374)
120 PRK07812 O-acetylhomoserine am 99.7 1.5E-14 3.2E-19 152.9 25.5 239 123-413 67-323 (436)
121 PRK13578 ornithine decarboxyla 99.7 8.8E-15 1.9E-19 159.9 24.3 232 131-416 176-448 (720)
122 PRK08249 cystathionine gamma-s 99.7 1.5E-14 3.3E-19 151.8 25.2 220 121-412 60-285 (398)
123 PRK06225 aspartate aminotransf 99.7 5.9E-14 1.3E-18 147.3 29.6 295 132-553 69-377 (380)
124 PRK07811 cystathionine gamma-s 99.7 1.7E-14 3.7E-19 151.2 25.3 219 123-413 59-284 (388)
125 PRK05968 hypothetical protein; 99.7 1.3E-14 2.8E-19 152.2 24.2 220 122-414 60-286 (389)
126 PRK10534 L-threonine aldolase; 99.7 2.1E-14 4.6E-19 147.9 25.4 310 101-550 12-331 (333)
127 PRK08114 cystathionine beta-ly 99.7 2.5E-14 5.4E-19 148.7 25.7 221 119-412 56-285 (395)
128 PRK08248 O-acetylhomoserine am 99.7 2.9E-14 6.3E-19 150.9 25.8 238 120-413 59-319 (431)
129 PRK08045 cystathionine gamma-s 99.7 4.6E-14 1E-18 147.6 26.9 221 121-413 48-275 (386)
130 TIGR03576 pyridox_MJ0158 pyrid 99.7 8.8E-14 1.9E-18 143.4 28.2 210 69-338 7-223 (346)
131 PRK08776 cystathionine gamma-s 99.7 4.9E-14 1.1E-18 148.2 26.7 221 120-412 55-282 (405)
132 PRK15399 lysine decarboxylase 99.7 5.5E-14 1.2E-18 153.6 27.8 229 131-415 197-456 (713)
133 PLN02509 cystathionine beta-ly 99.7 3.1E-14 6.8E-19 151.0 25.3 161 212-412 192-354 (464)
134 PRK07050 cystathionine beta-ly 99.6 2.9E-14 6.2E-19 149.6 24.8 223 120-414 60-289 (394)
135 PRK09028 cystathionine beta-ly 99.6 6.8E-14 1.5E-18 145.8 27.1 218 122-412 58-282 (394)
136 PRK08574 cystathionine gamma-s 99.6 3.1E-14 6.7E-19 148.9 24.7 220 121-412 49-274 (385)
137 PRK08064 cystathionine beta-ly 99.6 5.1E-14 1.1E-18 147.7 26.3 218 121-411 50-274 (390)
138 PRK05957 aspartate aminotransf 99.6 2.7E-13 5.9E-18 142.7 31.7 314 120-554 60-387 (389)
139 PRK06207 aspartate aminotransf 99.6 3.5E-13 7.6E-18 142.5 32.3 245 120-415 73-332 (405)
140 TIGR02618 tyr_phenol_ly tyrosi 99.6 1.4E-13 3.1E-18 142.7 27.9 281 90-426 38-346 (450)
141 PRK06234 methionine gamma-lyas 99.6 7.1E-14 1.5E-18 147.1 26.2 219 123-412 62-289 (400)
142 PRK07810 O-succinylhomoserine 99.6 1.1E-13 2.4E-18 145.6 27.3 222 120-413 65-293 (403)
143 COG1103 Archaea-specific pyrid 99.6 1.9E-13 4.1E-18 128.5 25.3 239 137-423 69-316 (382)
144 PRK15400 lysine decarboxylase 99.6 4.5E-14 9.7E-19 154.3 24.6 229 132-416 198-457 (714)
145 PRK09082 methionine aminotrans 99.6 1.3E-13 2.9E-18 144.9 27.6 255 108-414 50-315 (386)
146 TIGR01325 O_suc_HS_sulf O-succ 99.6 9.5E-14 2.1E-18 145.3 25.6 219 123-413 52-276 (380)
147 PRK11658 UDP-4-amino-4-deoxy-L 99.6 1.8E-13 3.9E-18 143.3 27.7 238 123-409 31-276 (379)
148 PRK06084 O-acetylhomoserine am 99.6 6.3E-14 1.4E-18 148.2 24.2 235 123-413 56-314 (425)
149 TIGR02080 O_succ_thio_ly O-suc 99.6 1.6E-13 3.5E-18 143.4 26.7 222 120-413 46-274 (382)
150 PRK07503 methionine gamma-lyas 99.6 1.1E-13 2.4E-18 145.8 25.4 221 122-413 62-289 (403)
151 COG0436 Aspartate/tyrosine/aro 99.6 6.6E-13 1.4E-17 138.9 30.3 328 103-552 43-391 (393)
152 cd00610 OAT_like Acetyl ornith 99.6 2.8E-13 6.1E-18 143.7 28.1 307 128-549 78-412 (413)
153 PF00155 Aminotran_1_2: Aminot 99.6 2.8E-13 6.1E-18 141.1 27.1 313 118-546 37-363 (363)
154 PRK13237 tyrosine phenol-lyase 99.6 3.8E-13 8.2E-18 139.9 27.4 274 91-421 46-348 (460)
155 PRK03244 argD acetylornithine 99.6 1.3E-12 2.7E-17 138.1 32.1 288 132-553 88-395 (398)
156 PRK05994 O-acetylhomoserine am 99.6 1.3E-13 2.8E-18 146.2 24.4 236 123-413 61-318 (427)
157 PRK07309 aromatic amino acid a 99.6 1.2E-12 2.6E-17 137.9 31.6 188 121-337 63-257 (391)
158 PRK00950 histidinol-phosphate 99.6 2E-13 4.3E-18 142.3 25.2 162 132-330 72-237 (361)
159 PRK07682 hypothetical protein; 99.6 6.6E-13 1.4E-17 139.2 28.9 310 120-552 52-376 (378)
160 PRK07324 transaminase; Validat 99.6 9.5E-13 2.1E-17 137.7 29.8 237 120-415 57-303 (373)
161 PRK06460 hypothetical protein; 99.6 4.3E-13 9.3E-18 140.0 27.1 222 119-413 39-267 (376)
162 PLN00175 aminotransferase fami 99.6 1.3E-12 2.8E-17 138.4 30.8 258 105-415 71-339 (413)
163 PRK08912 hypothetical protein; 99.6 1.7E-12 3.7E-17 136.5 31.6 244 120-415 58-312 (387)
164 PRK08363 alanine aminotransfer 99.6 1.1E-12 2.5E-17 138.4 30.2 253 120-423 65-330 (398)
165 cd01494 AAT_I Aspartate aminot 99.6 1.7E-14 3.6E-19 132.7 14.3 163 132-331 3-170 (170)
166 cd00617 Tnase_like Tryptophana 99.6 7.2E-13 1.6E-17 139.5 28.3 252 119-425 47-327 (431)
167 PRK12462 phosphoserine aminotr 99.6 3.6E-13 7.7E-18 137.8 25.1 337 92-551 5-361 (364)
168 PRK07671 cystathionine beta-ly 99.6 2.8E-13 6.1E-18 141.4 24.9 219 122-413 47-272 (377)
169 COG1003 GcvP Glycine cleavage 99.6 4.7E-13 1E-17 134.0 24.9 327 124-557 104-452 (496)
170 PRK14807 histidinol-phosphate 99.6 2.8E-12 6.1E-17 133.0 31.8 222 134-413 64-288 (351)
171 PRK06176 cystathionine gamma-s 99.6 4.5E-13 9.7E-18 139.9 25.5 220 121-413 46-272 (380)
172 TIGR01265 tyr_nico_aTase tyros 99.6 5.1E-12 1.1E-16 133.6 33.8 254 121-420 69-334 (403)
173 PLN02187 rooty/superroot1 99.6 3.9E-12 8.5E-17 136.4 32.9 321 120-555 103-441 (462)
174 COG0399 WecE Predicted pyridox 99.6 2.2E-12 4.7E-17 131.6 29.3 253 108-416 19-277 (374)
175 PRK05939 hypothetical protein; 99.6 2.6E-13 5.7E-18 142.3 23.2 237 122-411 44-288 (397)
176 PRK06290 aspartate aminotransf 99.6 2.3E-12 5E-17 136.3 30.4 314 125-554 81-407 (410)
177 PTZ00433 tyrosine aminotransfe 99.6 3.1E-12 6.7E-17 135.7 31.2 353 88-552 31-408 (412)
178 TIGR01326 OAH_OAS_sulfhy OAH/O 99.6 4.1E-13 9E-18 142.2 24.4 239 120-413 52-311 (418)
179 PLN02656 tyrosine transaminase 99.6 2.9E-12 6.3E-17 135.7 30.8 263 105-420 52-335 (409)
180 PRK08247 cystathionine gamma-s 99.6 4.4E-13 9.6E-18 139.6 23.9 232 122-426 49-288 (366)
181 PRK07777 aminotransferase; Val 99.6 2.8E-12 6.1E-17 134.9 30.1 246 119-415 55-312 (387)
182 PRK12414 putative aminotransfe 99.6 1.9E-12 4.1E-17 136.0 28.6 181 120-331 61-250 (384)
183 PRK07269 cystathionine gamma-s 99.6 3.4E-13 7.5E-18 139.9 22.5 233 120-426 49-288 (364)
184 PLN02242 methionine gamma-lyas 99.6 9.1E-13 2E-17 139.1 25.9 222 123-415 74-304 (418)
185 PLN00145 tyrosine/nicotianamin 99.6 3.4E-12 7.5E-17 135.8 29.9 252 120-420 89-356 (430)
186 PRK02731 histidinol-phosphate 99.6 1.5E-12 3.2E-17 136.1 26.6 287 133-550 71-364 (367)
187 PRK00854 rocD ornithine--oxo-a 99.6 3.9E-12 8.4E-17 134.5 30.1 296 124-550 82-399 (401)
188 PRK05387 histidinol-phosphate 99.6 3.7E-12 8.1E-17 132.3 29.2 283 133-550 64-351 (353)
189 PRK07337 aminotransferase; Val 99.6 4.6E-12 1E-16 133.3 29.8 190 107-331 49-247 (388)
190 PRK07550 hypothetical protein; 99.5 5.6E-12 1.2E-16 132.6 30.3 241 120-412 62-314 (386)
191 TIGR03537 DapC succinyldiamino 99.5 4.4E-12 9.5E-17 131.6 28.7 243 120-414 31-284 (350)
192 PRK04311 selenocysteine syntha 99.5 5.6E-12 1.2E-16 133.9 29.7 161 133-332 131-307 (464)
193 PRK08960 hypothetical protein; 99.5 4.4E-12 9.5E-17 133.5 28.9 192 106-331 50-249 (387)
194 PF00464 SHMT: Serine hydroxym 99.5 1.3E-12 2.9E-17 134.5 24.2 278 92-423 22-335 (399)
195 PRK07681 aspartate aminotransf 99.5 6.5E-12 1.4E-16 132.7 30.2 323 104-550 48-386 (399)
196 COG2873 MET17 O-acetylhomoseri 99.5 2.4E-12 5.2E-17 126.8 24.3 236 118-415 55-319 (426)
197 PTZ00125 ornithine aminotransf 99.5 1.4E-11 3.1E-16 130.2 32.2 171 130-332 74-263 (400)
198 PRK07582 cystathionine gamma-l 99.5 1.4E-12 3E-17 135.8 24.0 216 122-414 48-271 (366)
199 PRK08056 threonine-phosphate d 99.5 5.7E-12 1.2E-16 131.1 28.5 286 132-550 58-353 (356)
200 PRK05942 aspartate aminotransf 99.5 1.1E-11 2.4E-16 130.7 31.0 247 120-419 68-326 (394)
201 PRK06702 O-acetylhomoserine am 99.5 2.4E-12 5.3E-17 135.4 25.5 239 123-413 59-316 (432)
202 TIGR00474 selA seryl-tRNA(sec) 99.5 9.4E-12 2E-16 131.8 30.1 163 131-332 124-302 (454)
203 TIGR03540 DapC_direct LL-diami 99.5 1.3E-11 2.7E-16 129.8 30.8 241 126-416 68-318 (383)
204 PRK07568 aspartate aminotransf 99.5 1.2E-11 2.6E-16 130.6 30.7 240 121-413 62-314 (397)
205 PRK01688 histidinol-phosphate 99.5 1.6E-12 3.5E-17 134.9 23.6 282 132-546 60-350 (351)
206 PRK07505 hypothetical protein; 99.5 5.8E-12 1.2E-16 133.2 28.1 172 127-336 89-268 (402)
207 PLN00143 tyrosine/nicotianamin 99.5 2.9E-11 6.3E-16 128.1 32.9 196 105-333 53-259 (409)
208 PTZ00377 alanine aminotransfer 99.5 2.6E-11 5.6E-16 131.1 33.1 147 119-290 109-262 (481)
209 PRK07683 aminotransferase A; V 99.5 1.6E-11 3.5E-16 129.1 30.7 255 106-413 46-311 (387)
210 PLN03026 histidinol-phosphate 99.5 7.9E-12 1.7E-16 131.1 27.6 286 133-549 90-379 (380)
211 PRK06107 aspartate aminotransf 99.5 1.9E-11 4.1E-16 129.3 30.6 262 106-420 51-326 (402)
212 KOG1357|consensus 99.5 5.2E-13 1.1E-17 134.0 17.4 343 85-552 139-502 (519)
213 TIGR03246 arg_catab_astC succi 99.5 1.9E-11 4E-16 129.0 30.4 295 132-552 80-395 (397)
214 TIGR01885 Orn_aminotrans ornit 99.5 5.3E-11 1.1E-15 125.8 33.9 299 130-550 80-400 (401)
215 PRK03158 histidinol-phosphate 99.5 9.3E-12 2E-16 129.6 27.5 284 133-549 68-358 (359)
216 PF01041 DegT_DnrJ_EryC1: DegT 99.5 1.5E-11 3.2E-16 128.2 28.6 237 124-415 24-268 (363)
217 PRK04870 histidinol-phosphate 99.5 1.5E-11 3.2E-16 127.9 28.5 283 133-549 67-355 (356)
218 COG3844 Kynureninase [Amino ac 99.5 5.4E-12 1.2E-16 121.9 22.8 311 124-553 71-403 (407)
219 PRK06434 cystathionine gamma-l 99.5 5.4E-12 1.2E-16 131.3 24.6 217 120-412 59-283 (384)
220 TIGR01264 tyr_amTase_E tyrosin 99.5 3.1E-11 6.8E-16 127.6 30.6 316 121-552 69-399 (401)
221 PRK06836 aspartate aminotransf 99.5 5.9E-11 1.3E-15 125.2 32.4 196 104-332 49-260 (394)
222 PRK15407 lipopolysaccharide bi 99.5 1.9E-11 4.1E-16 129.9 28.5 246 124-409 62-330 (438)
223 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 9.4E-12 2E-16 129.2 25.2 224 118-412 48-279 (386)
224 PRK05967 cystathionine beta-ly 99.5 9E-12 1.9E-16 129.8 24.9 217 122-411 61-284 (395)
225 COG0112 GlyA Glycine/serine hy 99.5 7.5E-12 1.6E-16 124.7 22.7 239 120-415 63-310 (413)
226 TIGR01140 L_thr_O3P_dcar L-thr 99.5 8.7E-12 1.9E-16 128.2 24.3 214 132-412 50-269 (330)
227 PRK07908 hypothetical protein; 99.5 2.4E-11 5.2E-16 126.0 27.5 278 133-550 62-345 (349)
228 PLN02376 1-aminocyclopropane-1 99.5 3.4E-11 7.5E-16 129.9 29.4 181 126-334 95-297 (496)
229 PRK04635 histidinol-phosphate 99.5 8.9E-12 1.9E-16 129.5 23.9 221 134-414 65-293 (354)
230 PRK09276 LL-diaminopimelate am 99.5 6.2E-11 1.3E-15 124.6 30.2 237 127-415 71-319 (385)
231 PRK04073 rocD ornithine--oxo-a 99.5 3.4E-11 7.4E-16 127.0 28.1 224 131-407 84-326 (396)
232 PRK06348 aspartate aminotransf 99.5 7.3E-11 1.6E-15 124.1 30.3 263 103-420 45-319 (384)
233 PRK06358 threonine-phosphate d 99.5 7.2E-11 1.6E-15 122.7 29.8 283 133-550 58-353 (354)
234 PRK09265 aminotransferase AlaT 99.5 5.1E-11 1.1E-15 126.1 29.0 177 120-330 67-254 (404)
235 PRK08068 transaminase; Reviewe 99.5 9.3E-11 2E-15 123.5 30.8 254 107-413 51-318 (389)
236 PRK08175 aminotransferase; Val 99.5 1.4E-10 3.1E-15 122.3 32.2 257 120-424 62-326 (395)
237 TIGR02379 ECA_wecE TDP-4-keto- 99.5 7.6E-11 1.7E-15 123.1 29.5 237 123-408 29-272 (376)
238 PRK13355 bifunctional HTH-doma 99.5 7E-11 1.5E-15 128.9 30.3 178 120-331 180-368 (517)
239 PRK03715 argD acetylornithine 99.4 9.9E-11 2.2E-15 123.0 30.0 228 127-407 76-317 (395)
240 PRK03317 histidinol-phosphate 99.4 1.1E-10 2.3E-15 122.1 29.7 293 125-551 65-363 (368)
241 PRK09105 putative aminotransfe 99.4 1.1E-10 2.5E-15 121.8 29.0 281 132-550 81-368 (370)
242 PRK05166 histidinol-phosphate 99.4 4E-11 8.7E-16 125.4 25.6 223 133-412 75-306 (371)
243 TIGR00707 argD acetylornithine 99.4 1.4E-10 3E-15 121.7 29.6 227 129-407 69-309 (379)
244 PRK05964 adenosylmethionine--8 99.4 2.4E-10 5.3E-15 121.5 31.7 308 129-552 85-422 (423)
245 PRK01533 histidinol-phosphate 99.4 6.2E-11 1.3E-15 123.6 26.4 281 134-554 69-357 (366)
246 TIGR02617 tnaA_trp_ase tryptop 99.4 3.4E-11 7.4E-16 123.8 23.8 254 117-414 66-350 (467)
247 PLN02624 ornithine-delta-amino 99.4 4.3E-10 9.3E-15 121.0 33.2 171 130-332 118-309 (474)
248 PRK08153 histidinol-phosphate 99.4 1.1E-10 2.3E-15 122.1 27.5 290 134-553 72-366 (369)
249 PRK02936 argD acetylornithine 99.4 1E-10 2.2E-15 122.7 27.4 163 128-331 70-250 (377)
250 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.4 4.9E-11 1.1E-15 124.9 24.9 228 132-408 34-271 (375)
251 PRK07366 succinyldiaminopimela 99.4 2.1E-10 4.5E-15 120.8 29.6 242 120-415 63-319 (388)
252 PLN02231 alanine transaminase 99.4 6.6E-10 1.4E-14 120.8 33.5 149 118-291 161-316 (534)
253 PRK08636 aspartate aminotransf 99.4 4.9E-10 1.1E-14 118.5 31.0 267 103-415 49-328 (403)
254 PRK03321 putative aminotransfe 99.4 1.4E-10 3E-15 120.5 26.2 168 133-336 61-235 (352)
255 PRK04781 histidinol-phosphate 99.4 2.7E-10 5.9E-15 118.8 28.4 287 132-550 62-361 (364)
256 PLN02450 1-aminocyclopropane-1 99.4 1.8E-10 3.9E-15 123.8 27.7 248 126-420 87-358 (468)
257 PRK09148 aminotransferase; Val 99.4 6.9E-10 1.5E-14 117.4 31.6 244 120-413 63-316 (405)
258 PRK15481 transcriptional regul 99.4 2.8E-10 6E-15 121.5 28.4 293 127-550 123-429 (431)
259 PRK01278 argD acetylornithine 99.4 4.4E-10 9.5E-15 118.4 29.3 156 157-332 90-259 (389)
260 PRK06425 histidinol-phosphate 99.4 3E-10 6.5E-15 117.0 27.3 279 132-549 43-330 (332)
261 PRK02627 acetylornithine amino 99.4 6.3E-10 1.4E-14 117.4 30.4 173 128-332 80-266 (396)
262 PRK12381 bifunctional succinyl 99.4 4.8E-10 1E-14 118.6 29.1 298 132-556 84-403 (406)
263 TIGR00461 gcvP glycine dehydro 99.4 5.5E-10 1.2E-14 125.7 30.5 352 61-547 41-426 (939)
264 PRK09264 diaminobutyrate--2-ox 99.4 1.1E-09 2.4E-14 116.4 31.3 314 129-560 82-424 (425)
265 PRK05093 argD bifunctional N-s 99.4 1.7E-09 3.6E-14 114.5 32.3 294 133-553 86-401 (403)
266 PLN02607 1-aminocyclopropane-1 99.4 5.7E-10 1.2E-14 119.1 28.7 184 127-335 97-298 (447)
267 TIGR03538 DapC_gpp succinyldia 99.4 9.5E-10 2.1E-14 116.0 29.8 202 104-336 44-263 (393)
268 PRK07049 methionine gamma-lyas 99.3 3.3E-10 7.2E-15 120.1 26.0 226 122-413 80-317 (427)
269 PF05889 SLA_LP_auto_ag: Solub 99.3 1.6E-10 3.5E-15 116.8 22.1 226 128-406 55-293 (389)
270 PLN02760 4-aminobutyrate:pyruv 99.3 2.5E-09 5.4E-14 115.4 33.0 328 129-556 133-495 (504)
271 PRK09147 succinyldiaminopimela 99.3 8.8E-10 1.9E-14 116.4 29.0 201 105-336 46-264 (396)
272 PRK02610 histidinol-phosphate 99.3 1.4E-09 3E-14 113.9 29.7 178 125-336 66-253 (374)
273 PRK11522 putrescine--2-oxoglut 99.3 3.8E-09 8.2E-14 112.9 32.6 308 129-555 124-454 (459)
274 PRK04260 acetylornithine amino 99.3 1E-09 2.2E-14 115.0 26.6 149 158-332 87-249 (375)
275 PRK08117 4-aminobutyrate amino 99.3 3.5E-09 7.5E-14 113.0 30.8 308 129-553 86-430 (433)
276 PF02347 GDC-P: Glycine cleava 99.3 1.8E-09 3.9E-14 111.8 27.0 289 60-407 41-364 (429)
277 PRK07865 N-succinyldiaminopime 99.3 1E-09 2.2E-14 114.6 25.6 235 120-414 57-301 (364)
278 COG1982 LdcC Arginine/lysine/o 99.3 1E-10 2.3E-15 123.3 17.8 231 132-417 73-322 (557)
279 COG0626 MetC Cystathionine bet 99.3 1.6E-09 3.5E-14 111.4 25.1 221 121-413 59-288 (396)
280 PRK05769 4-aminobutyrate amino 99.3 1.1E-08 2.5E-13 109.0 31.3 308 128-553 96-440 (441)
281 PRK06855 aminotransferase; Val 99.2 5.7E-09 1.2E-13 111.4 29.0 253 120-420 68-337 (433)
282 TIGR03372 putres_am_tran putre 99.2 1.2E-08 2.7E-13 108.2 31.2 173 129-332 117-309 (442)
283 PRK03967 histidinol-phosphate 99.2 1.3E-08 2.7E-13 105.1 30.2 161 134-336 60-223 (337)
284 TIGR03539 DapC_actino succinyl 99.2 3.8E-09 8.2E-14 109.9 26.5 239 121-422 52-302 (357)
285 COG4992 ArgD Ornithine/acetylo 99.2 3.7E-09 8.1E-14 107.1 25.0 296 130-554 85-400 (404)
286 PRK13360 omega amino acid--pyr 99.2 1.7E-08 3.8E-13 107.5 31.6 312 129-553 89-441 (442)
287 PRK12403 putative aminotransfe 99.2 3.5E-08 7.6E-13 105.8 33.4 178 129-332 98-307 (460)
288 PRK08593 4-aminobutyrate amino 99.2 2E-08 4.3E-13 107.3 31.3 312 129-555 85-432 (445)
289 PRK09221 beta alanine--pyruvat 99.2 5.5E-08 1.2E-12 103.8 34.5 313 129-553 92-444 (445)
290 KOG2040|consensus 99.2 1.9E-09 4.2E-14 112.4 21.8 254 123-414 576-841 (1001)
291 PRK06541 hypothetical protein; 99.2 3.2E-08 6.9E-13 106.0 32.0 325 129-554 95-457 (460)
292 TIGR02407 ectoine_ectB diamino 99.2 1.6E-08 3.6E-13 107.0 29.5 179 128-333 77-280 (412)
293 PLN02672 methionine S-methyltr 99.2 9.3E-09 2E-13 117.7 29.0 314 129-550 734-1078(1082)
294 PRK14809 histidinol-phosphate 99.2 2.1E-08 4.7E-13 104.3 29.5 162 133-331 69-237 (357)
295 PRK14808 histidinol-phosphate 99.2 2.2E-08 4.7E-13 103.2 29.0 226 125-421 56-284 (335)
296 COG0160 GabT 4-aminobutyrate a 99.2 2E-08 4.3E-13 104.7 28.4 313 130-553 100-446 (447)
297 COG0001 HemL Glutamate-1-semia 99.2 1E-08 2.3E-13 104.9 25.6 201 84-333 59-284 (432)
298 PLN02482 glutamate-1-semialdeh 99.2 2.1E-08 4.6E-13 107.3 29.2 222 128-407 138-387 (474)
299 PRK08360 4-aminobutyrate amino 99.2 4.2E-08 9E-13 104.7 31.1 310 129-554 84-428 (443)
300 PRK04612 argD acetylornithine 99.2 7.2E-08 1.6E-12 101.8 32.1 304 129-555 82-406 (408)
301 PRK07590 L,L-diaminopimelate a 99.2 3.5E-08 7.6E-13 104.6 29.9 228 66-336 14-268 (409)
302 PRK07678 aminotransferase; Val 99.2 4.8E-08 1E-12 104.5 31.0 321 129-553 89-450 (451)
303 PRK09440 avtA valine--pyruvate 99.2 3.4E-08 7.3E-13 105.0 29.2 201 104-336 48-267 (416)
304 PRK00062 glutamate-1-semialdeh 99.2 1.9E-08 4.1E-13 107.1 27.2 227 128-406 89-337 (426)
305 PRK06062 hypothetical protein; 99.1 7.3E-08 1.6E-12 103.0 31.1 173 128-332 94-299 (451)
306 KOG0259|consensus 99.1 1.6E-07 3.4E-12 93.3 30.5 372 68-554 43-435 (447)
307 PRK08637 hypothetical protein; 99.1 2.8E-08 6.1E-13 104.6 27.5 154 157-331 71-242 (388)
308 PLN02368 alanine transaminase 99.1 1.9E-08 4.2E-13 106.0 26.2 258 120-423 102-392 (407)
309 COG0079 HisC Histidinol-phosph 99.1 4.3E-08 9.2E-13 101.1 28.0 244 198-551 101-353 (356)
310 PRK06105 aminotransferase; Pro 99.1 1.1E-07 2.3E-12 102.0 32.0 324 128-556 91-453 (460)
311 PRK06148 hypothetical protein; 99.1 9.2E-08 2E-12 111.6 33.4 312 128-553 662-1011(1013)
312 KOG0256|consensus 99.1 1.3E-08 2.8E-13 101.7 22.3 321 127-552 123-461 (471)
313 TIGR00713 hemL glutamate-1-sem 99.1 2.5E-08 5.5E-13 106.2 26.6 165 130-332 89-278 (423)
314 PRK07392 threonine-phosphate d 99.1 8.1E-08 1.8E-12 100.0 29.7 224 133-413 61-292 (360)
315 KOG0053|consensus 99.1 2.2E-08 4.8E-13 101.9 24.0 217 123-412 75-299 (409)
316 PTZ00376 aspartate aminotransf 99.1 2.9E-08 6.2E-13 105.1 26.2 188 120-334 67-271 (404)
317 PRK05639 4-aminobutyrate amino 99.1 1.2E-07 2.5E-12 101.6 30.7 310 130-555 97-446 (457)
318 PRK05839 hypothetical protein; 99.1 6.4E-08 1.4E-12 101.4 28.1 177 126-336 61-251 (374)
319 PRK00615 glutamate-1-semialdeh 99.1 3.2E-08 7E-13 105.0 25.8 172 128-332 92-284 (433)
320 PRK06058 4-aminobutyrate amino 99.1 1.1E-07 2.4E-12 101.7 29.8 313 128-552 98-442 (443)
321 TIGR00508 bioA adenosylmethion 99.1 8.1E-08 1.8E-12 102.1 28.5 233 131-407 90-353 (427)
322 PRK07495 4-aminobutyrate amino 99.1 3.2E-07 6.8E-12 97.5 33.0 308 129-553 83-422 (425)
323 PRK09792 4-aminobutyrate trans 99.1 1.6E-07 3.5E-12 99.8 30.6 175 128-332 82-282 (421)
324 COG1167 ARO8 Transcriptional r 99.1 4.7E-07 1E-11 97.1 34.2 182 119-332 126-314 (459)
325 TIGR03542 DAPAT_plant LL-diami 99.1 9.1E-08 2E-12 101.2 28.5 171 121-331 71-261 (402)
326 PRK08088 4-aminobutyrate amino 99.1 1.4E-07 3E-12 100.5 29.7 171 131-331 86-282 (425)
327 PRK06082 4-aminobutyrate amino 99.1 1.5E-07 3.3E-12 100.8 29.9 307 128-556 112-455 (459)
328 PRK12389 glutamate-1-semialdeh 99.1 1.1E-07 2.4E-12 101.2 28.5 220 128-406 92-340 (428)
329 TIGR00699 GABAtrns_euk 4-amino 99.1 1.2E-07 2.7E-12 101.0 28.6 84 230-320 237-325 (464)
330 TIGR00700 GABAtrnsam 4-aminobu 99.1 2.8E-07 6.1E-12 98.0 31.5 173 130-332 77-281 (420)
331 PRK06943 adenosylmethionine--8 99.1 4.1E-07 8.8E-12 97.3 32.7 318 129-556 97-450 (453)
332 PRK07036 hypothetical protein; 99.1 5.1E-07 1.1E-11 96.9 33.4 323 128-556 94-456 (466)
333 PRK06173 adenosylmethionine--8 99.1 2.4E-07 5.1E-12 98.5 30.2 308 129-554 87-427 (429)
334 PRK07986 adenosylmethionine--8 99.1 2E-07 4.4E-12 98.8 29.5 235 129-407 86-350 (428)
335 TIGR00709 dat 2,4-diaminobutyr 99.0 1.2E-07 2.7E-12 101.2 27.6 224 249-556 206-439 (442)
336 TIGR03801 asp_4_decarbox aspar 99.0 9.6E-08 2.1E-12 102.8 26.6 198 104-332 110-326 (521)
337 PRK07480 putative aminotransfe 99.0 5.2E-07 1.1E-11 96.6 31.9 179 129-333 94-305 (456)
338 KOG2467|consensus 99.0 8.7E-08 1.9E-12 94.4 23.3 275 121-427 78-360 (477)
339 PRK05664 threonine-phosphate d 99.0 3.1E-07 6.7E-12 94.5 28.9 206 133-410 53-264 (330)
340 PRK06149 hypothetical protein; 99.0 2E-07 4.3E-12 108.7 30.4 312 130-552 625-970 (972)
341 PLN00144 acetylornithine trans 99.0 2.7E-07 5.8E-12 96.8 28.6 176 129-332 57-251 (382)
342 PRK09257 aromatic amino acid a 99.0 1.4E-07 3.1E-12 99.6 26.5 198 104-330 47-260 (396)
343 PRK05965 hypothetical protein; 99.0 6.8E-07 1.5E-11 95.9 31.9 329 129-557 90-452 (459)
344 PRK06959 putative threonine-ph 99.0 3.6E-07 7.8E-12 94.4 28.5 275 132-555 56-336 (339)
345 PRK06777 4-aminobutyrate amino 99.0 9.7E-07 2.1E-11 93.8 32.2 228 130-407 84-337 (421)
346 PRK06917 hypothetical protein; 99.0 5.2E-07 1.1E-11 96.4 30.3 325 128-556 73-441 (447)
347 PRK09275 aspartate aminotransf 99.0 2E-07 4.3E-12 100.5 27.1 199 103-332 115-327 (527)
348 PRK07482 hypothetical protein; 99.0 5.7E-07 1.2E-11 96.5 30.4 180 128-333 93-306 (461)
349 PRK08354 putative aminotransfe 99.0 2.8E-07 6E-12 94.0 26.2 147 134-330 45-196 (311)
350 PRK07483 hypothetical protein; 99.0 1E-06 2.2E-11 94.0 31.0 327 129-555 73-440 (443)
351 PRK07481 hypothetical protein; 99.0 1.1E-06 2.3E-11 94.2 31.0 245 129-407 86-360 (449)
352 PRK06938 diaminobutyrate--2-ox 99.0 4.1E-07 8.9E-12 97.6 27.7 99 230-333 214-316 (464)
353 KOG0257|consensus 99.0 2.4E-07 5.1E-12 93.6 23.8 272 101-421 44-339 (420)
354 PRK07030 adenosylmethionine--8 99.0 1.4E-06 3.1E-11 93.5 31.4 317 128-554 89-448 (466)
355 PRK04013 argD acetylornithine/ 98.9 5.5E-07 1.2E-11 93.4 26.8 144 157-332 83-245 (364)
356 PRK06931 diaminobutyrate--2-ox 98.9 5.6E-07 1.2E-11 96.4 27.6 319 128-555 100-457 (459)
357 KOG1358|consensus 98.9 5E-08 1.1E-12 97.0 17.6 249 121-427 135-395 (467)
358 COG0403 GcvP Glycine cleavage 98.9 2.3E-06 5E-11 86.7 29.2 306 65-422 55-394 (450)
359 PRK07046 aminotransferase; Val 98.9 2.2E-06 4.7E-11 91.7 30.5 164 128-333 114-301 (453)
360 PRK06916 adenosylmethionine--8 98.9 2.2E-06 4.7E-11 92.0 30.0 240 128-407 98-371 (460)
361 TIGR03251 LAT_fam L-lysine 6-t 98.9 8.3E-07 1.8E-11 94.5 26.6 69 248-319 217-289 (431)
362 PLN02397 aspartate transaminas 98.9 1.3E-06 2.9E-11 92.9 27.8 126 198-329 144-282 (423)
363 PRK08297 L-lysine aminotransfe 98.9 1.3E-06 2.9E-11 93.2 27.6 222 231-553 212-442 (443)
364 PRK06918 4-aminobutyrate amino 98.9 4.4E-06 9.4E-11 89.7 31.5 174 129-332 97-303 (451)
365 PRK05630 adenosylmethionine--8 98.9 2.4E-06 5.1E-11 90.7 28.7 174 129-332 83-286 (422)
366 PRK08742 adenosylmethionine--8 98.8 7.3E-06 1.6E-10 88.0 32.0 183 129-333 107-323 (472)
367 PRK06209 glutamate-1-semialdeh 98.8 1.4E-06 2.9E-11 92.9 24.8 171 128-332 87-266 (431)
368 PLN02590 probable tyrosine dec 98.8 6.9E-09 1.5E-13 112.0 6.9 88 422-509 395-485 (539)
369 KOG1404|consensus 98.8 4.6E-06 9.9E-11 83.4 25.9 211 250-546 213-432 (442)
370 COG1932 SerC Phosphoserine ami 98.8 1.1E-06 2.5E-11 87.5 21.5 335 90-551 4-362 (365)
371 COG3977 Alanine-alpha-ketoisov 98.7 1E-05 2.2E-10 78.2 25.3 196 106-336 54-267 (417)
372 COG0161 BioA Adenosylmethionin 98.7 2.3E-05 4.9E-10 81.7 27.9 302 157-556 107-447 (449)
373 KOG3846|consensus 98.6 2.9E-06 6.3E-11 81.9 18.5 331 130-554 112-463 (465)
374 PRK12566 glycine dehydrogenase 98.6 3.7E-05 8.1E-10 86.9 29.2 291 61-416 56-383 (954)
375 KOG0634|consensus 98.4 0.00085 1.8E-08 68.4 29.5 143 121-289 96-247 (472)
376 PLN02880 tyrosine decarboxylas 98.4 4.6E-07 1E-11 97.7 6.5 88 422-509 347-437 (490)
377 PF00202 Aminotran_3: Aminotra 98.4 8.7E-05 1.9E-09 76.5 23.0 179 129-333 59-262 (339)
378 PF00282 Pyridoxal_deC: Pyrido 98.3 4.6E-07 1E-11 94.4 5.3 70 424-493 304-373 (373)
379 KOG3843|consensus 98.3 1.9E-05 4.1E-10 74.9 14.3 180 198-406 104-295 (432)
380 COG1921 SelA Selenocysteine sy 98.3 3.5E-05 7.6E-10 78.5 17.4 117 206-336 122-240 (395)
381 COG3033 TnaA Tryptophanase [Am 98.3 6.5E-05 1.4E-09 74.5 18.1 206 197-422 124-360 (471)
382 KOG0628|consensus 98.2 1.2E-06 2.6E-11 89.2 4.8 61 422-482 341-401 (511)
383 KOG1402|consensus 98.2 0.00039 8.5E-09 68.3 20.9 223 133-408 105-348 (427)
384 PLN02974 adenosylmethionine-8- 98.2 0.0025 5.3E-08 72.6 30.3 99 232-333 567-671 (817)
385 KOG1401|consensus 98.2 0.0018 3.9E-08 65.7 25.7 159 157-333 118-291 (433)
386 PF03841 SelA: L-seryl-tRNA se 97.9 1.1E-05 2.3E-10 81.5 3.7 161 133-332 51-227 (367)
387 COG1448 TyrB Aspartate/tyrosin 97.8 0.0035 7.6E-08 63.4 19.8 212 157-406 96-331 (396)
388 KOG0258|consensus 97.7 0.00074 1.6E-08 67.9 13.3 147 117-289 105-258 (475)
389 TIGR03799 NOD_PanD_pyr putativ 97.7 4.2E-05 9.1E-10 83.0 4.9 69 426-494 371-439 (522)
390 PF06838 Met_gamma_lyase: Meth 97.7 0.015 3.2E-07 58.8 22.0 161 137-339 62-245 (403)
391 COG0076 GadB Glutamate decarbo 97.6 9.3E-05 2E-09 78.9 6.7 84 437-520 324-407 (460)
392 TIGR03811 tyr_de_CO2_Ent tyros 97.6 0.00011 2.4E-09 80.6 7.1 59 436-494 435-503 (608)
393 KOG0633|consensus 97.6 0.006 1.3E-07 58.3 17.4 72 212-289 128-201 (375)
394 KOG1403|consensus 97.4 0.024 5.2E-07 55.3 18.6 241 231-555 193-440 (452)
395 KOG2790|consensus 97.2 0.091 2E-06 51.1 20.4 340 94-551 10-367 (370)
396 KOG0629|consensus 96.9 0.0011 2.3E-08 67.5 5.0 83 412-494 351-435 (510)
397 TIGR01788 Glu-decarb-GAD gluta 96.8 0.0011 2.3E-08 70.5 4.5 66 431-496 301-368 (431)
398 PLN02263 serine decarboxylase 96.4 0.0035 7.7E-08 66.6 4.9 108 430-553 336-444 (470)
399 KOG1412|consensus 95.3 1.6 3.4E-05 43.4 17.2 156 157-337 101-276 (410)
400 KOG1405|consensus 95.3 0.99 2.2E-05 45.5 16.0 82 231-314 255-341 (484)
401 PF12897 Aminotran_MocR: Alani 95.0 5 0.00011 41.3 28.7 179 133-330 73-267 (425)
402 PLN03032 serine decarboxylase; 93.5 0.078 1.7E-06 55.3 4.3 104 429-548 268-372 (374)
403 COG4100 Cystathionine beta-lya 91.7 6.8 0.00015 38.8 14.4 145 138-321 74-237 (416)
404 KOG2040|consensus 85.6 63 0.0014 35.7 24.6 152 250-416 248-422 (1001)
405 PRK02769 histidine decarboxyla 78.6 2 4.4E-05 45.0 3.6 104 431-551 267-371 (380)
406 KOG1411|consensus 67.5 34 0.00074 34.8 8.8 174 214-407 165-359 (427)
407 KOG1383|consensus 65.7 7 0.00015 41.1 3.9 50 441-490 340-389 (491)
408 cd01455 vWA_F11C1-5a_type Von 63.7 17 0.00038 33.9 5.8 55 232-286 95-149 (191)
409 COG2515 Acd 1-aminocyclopropan 51.7 1.2E+02 0.0027 30.4 9.6 133 120-287 42-188 (323)
410 TIGR01361 DAHP_synth_Bsub phos 39.5 70 0.0015 31.5 6.0 64 225-291 138-206 (260)
411 COG0108 RibB 3,4-dihydroxy-2-b 39.2 54 0.0012 30.7 4.7 50 231-283 140-189 (203)
412 COG0721 GatC Asp-tRNAAsn/Glu-t 35.4 1.7E+02 0.0037 24.0 6.6 69 7-76 9-80 (96)
413 PRK13396 3-deoxy-7-phosphohept 34.9 89 0.0019 32.3 6.0 61 228-291 218-283 (352)
414 COG1954 GlpP Glycerol-3-phosph 33.9 57 0.0012 29.7 3.9 47 230-289 12-60 (181)
415 PF00926 DHBP_synthase: 3,4-di 33.3 74 0.0016 29.9 4.7 50 231-283 136-185 (194)
416 cd06450 DOPA_deC_like DOPA dec 32.9 50 0.0011 33.6 4.0 57 438-494 231-287 (345)
417 TIGR00135 gatC glutamyl-tRNA(G 32.5 2.2E+02 0.0047 23.0 6.9 66 9-75 9-77 (93)
418 COG2870 RfaE ADP-heptose synth 32.4 46 0.00099 34.7 3.4 44 258-301 150-199 (467)
419 PLN02994 1-aminocyclopropane-1 32.3 90 0.0019 28.0 5.0 44 126-174 93-136 (153)
420 PF02603 Hpr_kinase_N: HPr Ser 31.2 55 0.0012 28.3 3.4 48 228-285 64-111 (127)
421 PRK13397 3-deoxy-7-phosphohept 30.6 1.3E+02 0.0027 29.6 6.0 64 225-291 128-196 (250)
422 PF01301 Glyco_hydro_35: Glyco 29.1 1.1E+02 0.0023 31.3 5.5 59 225-285 17-82 (319)
423 smart00642 Aamy Alpha-amylase 28.9 35 0.00077 31.1 1.8 30 260-289 64-93 (166)
424 PF14488 DUF4434: Domain of un 28.6 1.5E+02 0.0033 27.0 5.9 56 228-285 16-84 (166)
425 TIGR00506 ribB 3,4-dihydroxy-2 27.7 1.2E+02 0.0025 28.7 5.1 49 231-282 141-189 (199)
426 PRK08057 cobalt-precorrin-6x r 27.5 43 0.00093 32.8 2.3 29 262-290 48-76 (248)
427 COG1184 GCD2 Translation initi 26.8 6.3E+02 0.014 25.5 10.3 98 156-285 120-227 (301)
428 PF12162 STAT1_TAZ2bind: STAT1 26.2 74 0.0016 18.6 2.1 16 12-27 5-20 (23)
429 KOG0630|consensus 26.1 72 0.0016 34.0 3.6 50 432-481 391-440 (838)
430 KOG3413|consensus 25.7 82 0.0018 27.8 3.3 34 11-44 36-69 (156)
431 PRK12595 bifunctional 3-deoxy- 25.3 1.2E+02 0.0026 31.5 5.2 64 225-291 231-299 (360)
432 PF02571 CbiJ: Precorrin-6x re 25.0 51 0.0011 32.3 2.3 30 261-290 48-77 (249)
433 PF05670 DUF814: Domain of unk 24.7 18 0.0004 29.2 -0.8 24 269-292 20-44 (90)
434 TIGR00334 5S_RNA_mat_M5 ribonu 24.5 1E+02 0.0022 28.4 3.9 57 219-291 5-61 (174)
435 PRK11633 cell division protein 24.2 4E+02 0.0087 25.7 8.1 51 497-549 161-213 (226)
436 PF00128 Alpha-amylase: Alpha 23.6 46 0.00099 33.0 1.8 33 257-289 43-75 (316)
437 COG2099 CobK Precorrin-6x redu 23.5 1E+02 0.0023 30.1 4.0 30 262-291 49-78 (257)
438 TIGR00381 cdhD CO dehydrogenas 23.3 3E+02 0.0065 28.8 7.4 49 225-285 197-246 (389)
439 PRK03353 ribB 3,4-dihydroxy-2- 23.2 1.5E+02 0.0033 28.3 5.1 51 233-287 153-203 (217)
440 COG0329 DapA Dihydrodipicolina 22.7 90 0.0019 31.5 3.6 52 225-278 18-69 (299)
441 PLN00125 Succinyl-CoA ligase [ 22.7 1.6E+02 0.0034 29.8 5.3 53 231-289 79-131 (300)
442 PRK04366 glycine dehydrogenase 22.6 1.2E+02 0.0026 32.8 4.8 41 438-480 332-372 (481)
443 PRK09441 cytoplasmic alpha-amy 22.4 55 0.0012 35.5 2.1 31 258-288 73-103 (479)
444 TIGR01362 KDO8P_synth 3-deoxy- 22.0 2.2E+02 0.0048 27.9 5.9 77 206-289 106-185 (258)
445 TIGR01019 sucCoAalpha succinyl 21.9 1.5E+02 0.0032 29.8 4.9 52 231-289 73-124 (286)
446 TIGR02717 AcCoA-syn-alpha acet 21.9 2.6E+02 0.0057 29.9 7.2 56 231-289 74-131 (447)
447 cd00950 DHDPS Dihydrodipicolin 21.9 1.2E+02 0.0025 30.2 4.3 52 225-278 14-65 (284)
448 COG1504 Uncharacterized conser 21.8 1.5E+02 0.0032 25.0 3.9 48 227-284 47-94 (121)
449 PRK12821 aspartyl/glutamyl-tRN 21.7 4.1E+02 0.0088 28.4 8.0 67 8-75 396-466 (477)
450 PF03599 CdhD: CO dehydrogenas 21.7 1.5E+02 0.0033 30.9 5.0 44 230-285 107-150 (386)
451 PF02638 DUF187: Glycosyl hydr 21.5 1.5E+02 0.0032 30.2 4.9 19 265-283 69-87 (311)
452 KOG0622|consensus 21.4 6.9E+02 0.015 26.4 9.5 79 197-285 123-217 (448)
453 COG0367 AsnB Asparagine syntha 21.2 6.3E+02 0.014 27.9 10.0 107 156-291 232-349 (542)
454 PRK00685 metal-dependent hydro 20.8 5.2E+02 0.011 24.2 8.5 58 214-278 155-213 (228)
455 TIGR02026 BchE magnesium-proto 20.2 2.9E+02 0.0064 30.0 7.2 66 215-290 35-103 (497)
456 PRK00910 ribB 3,4-dihydroxy-2- 20.2 2E+02 0.0043 27.5 5.1 50 233-286 154-203 (218)
No 1
>KOG0628|consensus
Probab=100.00 E-value=1.2e-91 Score=694.03 Aligned_cols=471 Identities=58% Similarity=1.045 Sum_probs=453.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccC
Q psy9807 17 GDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYF 96 (561)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~ 96 (561)
||.++||+.+++|||+|++|+++++++||.|.++|+++++++|...|++|+++++|++|+++.|.||.+||+||+||+|+
T Consensus 1 Md~~efR~~gk~mVD~IadY~e~ir~r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyf 80 (511)
T KOG0628|consen 1 MDSEEFREEGKEMVDYIADYLENIRKRRVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYF 80 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHH
Q psy9807 97 PTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAK 176 (561)
Q Consensus 97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar 176 (561)
|++.+++++++|++...++..+++|.+||+++|||..+.+||++++++|..|...+.+.++|++.+++|++++.++++||
T Consensus 81 pa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR 160 (511)
T KOG0628|consen 81 PAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAAR 160 (511)
T ss_pred cCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877888999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEE
Q psy9807 177 AKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQ 252 (561)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~ 252 (561)
...+.+.+...|.++++.+..++|+|+|+ +|++|||.+++++++.+|+ .+..|+.+.|+++|++ |++.|..|++
T Consensus 161 ~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~--D~arGlIPf~ 238 (511)
T KOG0628|consen 161 TEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEE--DIARGLIPFF 238 (511)
T ss_pred HHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHH--HHhCCCccEE
Confidence 99999999999999999899999999999 9999999999999999999 8999999999999999 9999999999
Q ss_pred EEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 253 VVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 253 vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
|++|.|||.++++|+|.+|+.+|+++|+||||||||+|.++.||++|.++.|++.|||+.+++|||+.+-+.|+.+|+|+
T Consensus 239 v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd 318 (511)
T KOG0628|consen 239 VCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKD 318 (511)
T ss_pred EEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 333 PSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
...+..+++.++-||.+...+..+++++|++..+|||+++++|+.++.+|.+++++.++++.++++.|.+.+.+.+.||+
T Consensus 319 ~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~ 398 (511)
T KOG0628|consen 319 GTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEI 398 (511)
T ss_pred CceeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCccee
Confidence 98888889999999999877778999999999999999999999999999999999999999999999999999888888
Q ss_pred eccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeec
Q psy9807 413 IYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL 492 (561)
Q Consensus 413 ~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~ 492 (561)
.++...++ ||||.
T Consensus 399 ~~~~~lgL-------------------------------------------------------------------vcFRl 411 (511)
T KOG0628|consen 399 VNKRILGL-------------------------------------------------------------------VCFRL 411 (511)
T ss_pred ecccccce-------------------------------------------------------------------eEEee
Confidence 87776666 45555
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 493 KGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 493 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
++.|+.|++++++++.+|++++.++...|+.+||++|+++.|+++||++.++.|.+.+..+.+.
T Consensus 412 k~~N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~ 475 (511)
T KOG0628|consen 412 KGDNEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA 475 (511)
T ss_pred cCCcHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 5679999999999999999999999999999999999999999999999999999999886554
No 2
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=1.6e-89 Score=730.52 Aligned_cols=469 Identities=37% Similarity=0.711 Sum_probs=429.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCcc
Q psy9807 16 MGDVNEFKDFAKAMVDYVGNYLENIRD----RRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPK 91 (561)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~ 91 (561)
.||+++||+++++++|++.+|++++.+ +||.+.++|+++++.++.++|++|++++++++++.+.+.|++++|+||+
T Consensus 53 ~m~~~~~r~~~~~~~d~i~~~~~~~~~~~~~~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~ 132 (539)
T PLN02590 53 PMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHWQSPS 132 (539)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcCCCCC
Confidence 499999999999999999999999887 7999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVA 171 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~a 171 (561)
||+|++++++++++++|++++++|+++++|..||+++++|+++++|+++++|+|+.|.. .+.++|+||+|||+||++|
T Consensus 133 f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~--~~~~gG~~~sGgSeAnl~a 210 (539)
T PLN02590 133 YFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLS--TGNGGGVIQGTGCEAVLVV 210 (539)
T ss_pred eeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCccccc--CCCCceEEcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987542 2346899999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccC---CeEEeeC-C--CCccChhhHHHHHhhhc
Q psy9807 172 LLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLG---KMLDLPK-E--FLACSGGKGGGVIQRKS 242 (561)
Q Consensus 172 l~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~---~v~~v~~-~--~g~~d~~~Le~~i~~~~ 242 (561)
|.+||++.....+.. ..+++++|+|+ +|+.||+++.|. +++.||+ . +++||+++|+++|++
T Consensus 211 l~aAR~~~~~~~g~~--------~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~-- 280 (539)
T PLN02590 211 VLAARDRILKKVGKT--------LLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISH-- 280 (539)
T ss_pred HHHHHHHHHhhhccc--------CCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHH--
Confidence 999999876432111 13578999998 999999998876 5999999 3 579999999999999
Q ss_pred hhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc
Q psy9807 243 DREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT 322 (561)
Q Consensus 243 ~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P 322 (561)
++++|..|++||+|+|||.+|++|||++|+++|++||+|+||||||||+++++|++++++.|+++||||++|+||||++|
T Consensus 281 d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p 360 (539)
T PLN02590 281 DLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFAN 360 (539)
T ss_pred HHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEecChhhHHHhhccCCCccccCC--CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy9807 323 FDCSAMWLKDPSWVVNAFNVDPLYLKHDQ--QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEF 400 (561)
Q Consensus 323 ~g~g~l~~r~~~~l~~~~~~~~~yl~~~~--~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l 400 (561)
++||++++|++..+..++...+.|+.... .+...++.+|++++|||++++++|++|+.+|.+|+++++++++++|++|
T Consensus 361 ~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~ 440 (539)
T PLN02590 361 QTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHF 440 (539)
T ss_pred cCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888999999996432 2345789999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhh
Q psy9807 401 EQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 480 (561)
Q Consensus 401 ~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~ 480 (561)
.+.|++.|+||++.++.+++||||++|.....
T Consensus 441 ~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~------------------------------------------------ 472 (539)
T PLN02590 441 EDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDE------------------------------------------------ 472 (539)
T ss_pred HHHHhcCCCeEEecCCceEEEEEEecCCCCCH------------------------------------------------
Confidence 99999999999999999999999987621000
Q ss_pred hhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 481 YEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 481 ~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
...+++|.++.++|+++|.++++++.++|+.+||++++||.|+++||+.+++.|.+.+.++.++
T Consensus 473 ------------~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~~ 536 (539)
T PLN02590 473 ------------DQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTRN 536 (539)
T ss_pred ------------HHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhccc
Confidence 0135678999999999999999999999999999999999999999999999999998887654
No 3
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=2.1e-84 Score=692.29 Aligned_cols=469 Identities=42% Similarity=0.763 Sum_probs=427.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCcccccc
Q psy9807 16 MGDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAY 95 (561)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~ 95 (561)
.||+++||++++++++.+.+|++++.++||.|..+|+++++.++..+|++|.+++++++++.+.+.|++.+|+||+||+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~ 88 (490)
T PLN02880 9 PMDAEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYFAY 88 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEe
Confidence 39999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHH
Q psy9807 96 FPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGA 175 (561)
Q Consensus 96 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~a 175 (561)
++++++++++++|++.+++|+++.+|+.||.++++|+++++|+++++|+|+.|.. .+.++|+||+|||+||++||++|
T Consensus 89 ~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~--~~~~gG~~tsggs~anl~al~~A 166 (490)
T PLN02880 89 YPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLS--TGNGGGVIQGTASEAVLVVLLAA 166 (490)
T ss_pred ccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhc--CCCCceEEcCccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987542 23468999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccC---CeEEeeC-C--CCccChhhHHHHHhhhchhhc
Q psy9807 176 KAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLG---KMLDLPK-E--FLACSGGKGGGVIQRKSDREM 246 (561)
Q Consensus 176 r~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~---~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~ 246 (561)
|++.....+..+ .+++++|+|+ +|+.||+++.|. .++.||+ . +++||+++|+++|++ ++++
T Consensus 167 R~~~~~~~g~~~--------~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~--~~~~ 236 (490)
T PLN02880 167 RDRVLRKVGKNA--------LEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAIST--DLSS 236 (490)
T ss_pred HHHHHHHhcccc--------cCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHH--HHHC
Confidence 998764422111 2468999987 999999998876 4899999 3 579999999999999 9999
Q ss_pred CCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccce
Q psy9807 247 CSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCS 326 (561)
Q Consensus 247 g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g 326 (561)
|..|++||+|+|||.+|++|||++|+++|++||+|+||||||||+++++|++++.++|+++|||+++|+||||++|++||
T Consensus 237 g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g 316 (490)
T PLN02880 237 GLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCS 316 (490)
T ss_pred CCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecChhhHHHhhccCCCccccCCC--CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q psy9807 327 AMWLKDPSWVVNAFNVDPLYLKHDQQ--GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLV 404 (561)
Q Consensus 327 ~l~~r~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l 404 (561)
++++|+...+...+...+.|+..... ....++.+++++++||++++++|++++.+|.+|+++++++++++++++.+.|
T Consensus 317 ~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l 396 (490)
T PLN02880 317 LLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLV 396 (490)
T ss_pred EEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987777788888999876432 2356788899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhh
Q psy9807 405 RSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL 484 (561)
Q Consensus 405 ~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~ 484 (561)
++.|+|+++.++.+++||||++|.....
T Consensus 397 ~~~~~~el~~~~~~~iv~Fr~~~~~~~~---------------------------------------------------- 424 (490)
T PLN02880 397 AQDSRFEVVTPRIFSLVCFRLVPPKNNE---------------------------------------------------- 424 (490)
T ss_pred hcCCCEEEecCCceEEEEEEEeCCCCCh----------------------------------------------------
Confidence 9999999999999999999987521100
Q ss_pred hcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 485 MGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 485 ~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
...+++|.++.++|+++|.++++++.++|+.++|+|+++|+|+++||+.+++.|.++++++..+
T Consensus 425 --------~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~~ 488 (490)
T PLN02880 425 --------DNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLGK 488 (490)
T ss_pred --------hhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 0136678899999999999999999999999999999999999999999999999999887653
No 4
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=1.6e-70 Score=586.18 Aligned_cols=468 Identities=17% Similarity=0.211 Sum_probs=379.2
Q ss_pred HHHHHHHHHHHHHHHHHHHh--cCCCCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCC
Q psy9807 20 NEFKDFAKAMVDYVGNYLEN--IRDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFP 97 (561)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~ 97 (561)
..+..+.+++.+.+++|+.+ ....|+.+.+.++.. ...+|++|.+.+++++++.+.+.+++++|+||+||||++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~ 97 (522)
T TIGR03799 22 STLGRIEQKISQNLAGFLQEHIVAIEKPLSEIEKDFS----SAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMT 97 (522)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhccCCCchhhhhccc----ccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEecc
Confidence 45666777777777777666 444566665544332 457899999999999999999999999999999999999
Q ss_pred CC-CChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCC-Cccccc---cCCCCCCeEEeCChhHHHHHHH
Q psy9807 98 TA-NSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDL-PKEFLA---CSGGKGGGVIQGTASEATLVAL 172 (561)
Q Consensus 98 ~~-~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~-~~~~~~---~~~~~~~g~~t~ggT~anl~al 172 (561)
++ +.+...+++ +.+++|+|...|+.||++++||+++++|++++++. ++.|+. ...+.++|+||+|||+||++|+
T Consensus 98 ~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al 176 (522)
T TIGR03799 98 SALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITAL 176 (522)
T ss_pred CCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHH
Confidence 86 333334677 67789999999999999999999999999999963 322211 0122367999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCccc--------ccceEEeccc---chHHHHHHhccC---CeEEeeC-CCCccChhhHHHH
Q psy9807 173 LGAKAKTMQRVKEAHPDWKDSDI--------IANLIASPAC---TELEVVMLDWLG---KMLDLPK-EFLACSGGKGGGV 237 (561)
Q Consensus 173 ~~ar~~~~~~~~~~~~~~~~~~~--------~~~~vv~~s~---~s~~kaa~~~g~---~v~~v~~-~~g~~d~~~Le~~ 237 (561)
++||++.....+. +.+....++ .++.+||+|+ +|+.|++++.|. +++.||+ ++++||+++|+++
T Consensus 177 ~~AR~~~~~~~~~-~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~ 255 (522)
T TIGR03799 177 WVARNRLLKADGD-FKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDK 255 (522)
T ss_pred HHHHHHhcccccc-ccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHH
Confidence 9999986543111 111222221 2467888887 999999988776 7999999 8899999999999
Q ss_pred HhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCc
Q psy9807 238 IQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHK 317 (561)
Q Consensus 238 i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK 317 (561)
|++ +++++..|++|++++|||.+|++|||++|+++|++||+|+||||||||+.++++++++++.+++.|||+++|+||
T Consensus 256 i~~--~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK 333 (522)
T TIGR03799 256 CAE--LAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHK 333 (522)
T ss_pred HHH--HHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhh
Confidence 998 888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy9807 318 WMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLA 397 (561)
Q Consensus 318 ~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la 397 (561)
||++|+|||++++|++..+ ..+...+.|+.... ..++.+++++++|+++++++|++++.+|..|+++++++.++++
T Consensus 334 ~l~~P~g~G~llvr~~~~~-~~~~~~~~Yl~~~~---~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la 409 (522)
T TIGR03799 334 QLYVPMGAGMVLFKDPALM-SAIEHHAEYILRKG---SKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKA 409 (522)
T ss_pred cCCcCcccEEEEEeCHHHH-HHhccCcchhcCCC---CCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999999999998654 45777788985432 2456788999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchh
Q psy9807 398 KEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRF 477 (561)
Q Consensus 398 ~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~ 477 (561)
++|.+.|++.|+|+++.++.+++||||+.|..+...... +- .+.....+
T Consensus 410 ~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~---------------~~--------------~~~~~~~~-- 458 (522)
T TIGR03799 410 KYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAK---------------AD--------------EEQREKIN-- 458 (522)
T ss_pred HHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccc---------------cc--------------hhhhhhHH--
Confidence 999999999999999999999999999876432110000 00 00000000
Q ss_pred hhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeEC-------CEEEEEEEecCCCCCHHHHHHHHHH
Q psy9807 478 EVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIR-------DVYFLRMAVCSRYSESSDMIYSWNE 545 (561)
Q Consensus 478 ~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-------g~~~lR~~~~~~~t~~~di~~l~~~ 545 (561)
...+++|+.+.++++++|..+++.|..+ +..++|++++||.|+++||+.+++.
T Consensus 459 ---------------~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 459 ---------------ELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred ---------------HHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 0136778999999999999999988765 4578999999999999999998764
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=1.9e-71 Score=574.25 Aligned_cols=367 Identities=37% Similarity=0.640 Sum_probs=327.5
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHH
Q psy9807 51 PGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTEL 130 (561)
Q Consensus 51 ~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~l 130 (561)
|++|++.++..+|++|.++++|++++.+.+.+++.+|+||+||+|+++++++++++++++++.+|+|...|+.+|.++++
T Consensus 1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~ 80 (373)
T PF00282_consen 1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI 80 (373)
T ss_dssp TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---ch
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TE 207 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s 207 (561)
|+++++|+++++|+|..+... +.++|+||+|||+||++|+++||++..++.+..+.. + .+++++|+|+ ||
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~--~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~--~---~~~~~i~~s~~aH~S 153 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFS--KDAGGVFTSGGTEANLYALLAARERALPRSKAKGVE--E---IPKPVIYVSEQAHYS 153 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTST--TTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTT--H---CSSEEEEEETTS-TH
T ss_pred hHHHHHHHHHHhCCccccccc--CCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccc--c---ccccccccccccccH
Confidence 999999999999999764321 126899999999999999999999988776554421 0 3468888888 99
Q ss_pred HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech
Q psy9807 208 LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 208 ~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa 286 (561)
+.|++.+.|..++.||+ ++++||+++|+++|++ +.++|..|++|++|+|||.+|++|||++|+++|++||+|+||||
T Consensus 154 ~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~--~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDa 231 (373)
T PF00282_consen 154 IEKAARILGLGVRKIPTDEDGRMDIEALEKALEK--DIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDA 231 (373)
T ss_dssp HHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHH--HHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEE
T ss_pred HHHhcceeeeEEEEecCCcchhhhHHHhhhhhcc--cccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecc
Confidence 99999999999999999 8899999999999999 99999999999999999999999999999999999999999999
Q ss_pred hcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCC--CCCCCCCCccccc
Q psy9807 287 AYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQ--QGSAPDYRHWQIP 364 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~--~~~~~~~~~~~~~ 364 (561)
||||.++++|.++++..++++||||++|+||||++|++||++++|++..+...+...+.|+.... .+...++.+++++
T Consensus 232 A~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~ 311 (373)
T PF00282_consen 232 AYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQ 311 (373)
T ss_dssp TTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSS
T ss_pred cccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999988888888899998543 1334567889999
Q ss_pred CcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecc
Q psy9807 365 LGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLK 426 (561)
Q Consensus 365 ~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~ 426 (561)
+||+++++++|++++.+|.+|+++++++.+++|++|++.|++.|+|+++.++.+++|||||+
T Consensus 312 ~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 312 GSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp SSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred ccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999985
No 6
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=3.9e-65 Score=547.81 Aligned_cols=502 Identities=18% Similarity=0.214 Sum_probs=386.9
Q ss_pred HhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCC
Q psy9807 7 KKIKNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTH 86 (561)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~ 86 (561)
++.|+||+- -+.+.|++++.++++.+.++..+..... .+..++++++. ..+.+...+++++++++.+.+.+++.+
T Consensus 5 ~a~flgpk~-en~~~~~~~~~~~~~~~~~~r~~~~p~d-~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~ 79 (608)
T TIGR03811 5 NALFIGDKA-ENGQLYKDLLNKLVDEHLGWRQNYMPQD-KPVISPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVP 79 (608)
T ss_pred hheeecCcc-cCHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCC
Confidence 578999998 7888899999999999999998832211 13456666555 345666678999999999999999999
Q ss_pred CCCc-cccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh
Q psy9807 87 WHSP-KFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 165 (561)
Q Consensus 87 ~~~p-~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT 165 (561)
|+|| ||+||+++++++|+++++++.+++|+|+..|+.||.++++|+++++|+++++|+++. +|+||+|||
T Consensus 80 ~~~P~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~---------~G~~TsGGT 150 (608)
T TIGR03811 80 WHSAGRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG---------WGHIVADGS 150 (608)
T ss_pred CCCccceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC---------CeEEeCChH
Confidence 9999 999999999999999999999999999999999999999999999999999999863 799999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHhcCC-------CC------------------------CC----c-ccccce-EEeccc-
Q psy9807 166 EATLVALLGAKAKTMQR--VKEAHP-------DW------------------------KD----S-DIIANL-IASPAC- 205 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~--~~~~~~-------~~------------------------~~----~-~~~~~~-vv~~s~- 205 (561)
+||+.||++||+..... .+...+ +| .. . ....++ ++++|.
T Consensus 151 ~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~ 230 (608)
T TIGR03811 151 LANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQT 230 (608)
T ss_pred HHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCC
Confidence 99999999999864110 000000 00 00 0 001122 566666
Q ss_pred --chHHHHHHhccC---CeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH---h
Q psy9807 206 --TELEVVMLDWLG---KMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC---R 276 (561)
Q Consensus 206 --~s~~kaa~~~g~---~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia---~ 276 (561)
||+.||+.+.|. +++.||+ ++++||+++|+++|++ +.++|..|++||+|+|||.+|+||||++|+++| +
T Consensus 231 aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~--~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~ 308 (608)
T TIGR03811 231 KHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRK--LAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLM 308 (608)
T ss_pred ccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHH--HHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHH
Confidence 999999988776 6999999 8999999999999999 888998899999999999999999999999999 6
Q ss_pred hcCc--eEEechhccccc--ccC------------------------------ccccccccCccccceeeecCCcccccc
Q psy9807 277 QKDV--WLHVDAAYAGSA--FIC------------------------------PENRYLMKGVELADSFNFNPHKWMLVT 322 (561)
Q Consensus 277 ~~~~--~lhVDaA~gg~~--~~~------------------------------~~~~~~~~gi~~aDsi~~~~HK~l~~P 322 (561)
++|+ |+||||||||.+ ++. ++.++.++++++||||++|+|||+++|
T Consensus 309 ~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~P 388 (608)
T TIGR03811 309 KEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIP 388 (608)
T ss_pred HcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccC
Confidence 7898 699999999975 222 356677889999999999999999999
Q ss_pred ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHh--hHHHHHHHHHHHHHHHHH
Q psy9807 323 FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLL--GVKYLQEYIRKQISLAKE 399 (561)
Q Consensus 323 ~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~ 399 (561)
++||++++|+.. +...+...++|+.............++++++|+ ++++++|++++.+ |.+|+.+++++++++|++
T Consensus 389 y~~G~ll~Rd~~-~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~ 467 (608)
T TIGR03811 389 YSAGGIVIQDIR-MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHR 467 (608)
T ss_pred CCeEEEEEeCHH-HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 999999999986 566778889999754322112456678899986 7799999999999 999999999999999999
Q ss_pred HHHHHhc------CCCeEE--eccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHh
Q psy9807 400 FEQLVRS------DDRFEV--IYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLV 471 (561)
Q Consensus 400 l~~~l~~------~~g~~l--~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l 471 (561)
+.+.|++ .|.|++ +.+|++++||||+.+... ..+.+.-++.+.+++..
T Consensus 468 ~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~------------------------~~l~~~n~ln~~i~~~~ 523 (608)
T TIGR03811 468 FYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGN------------------------DDLVKMNKLNHAFYDYA 523 (608)
T ss_pred HHHHHHhcccccCCCCeeEEecCCCCcceEEEEEecCCC------------------------ccHHHHHHHHHHHHHhh
Confidence 9999998 567887 788999999999976431 11234445666666666
Q ss_pred ccCchhhhhhhhhh--cceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCH-HHHHHHHHHHHH
Q psy9807 472 RSDDRFEVIYEVLM--GLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSES-SDMIYSWNEIKT 548 (561)
Q Consensus 472 ~~~~~~~~~~~~~~--~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~-~di~~l~~~l~~ 548 (561)
.=.++= ++.+++ +-..|...+-......+++++.-...-+ ....+..+||.++|+|..++ +.++.+++.|++
T Consensus 524 ~~~~g~--~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~---~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~ 598 (608)
T TIGR03811 524 SYVKGS--IYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEW---QRAGKVTILRASVMTPYMNDKENFDEYAPKIKA 598 (608)
T ss_pred ccccCC--CCCcceEeeecccccchhhhhHHHHHHHcCCChhhh---ccCCceEEEEEEecCcccCChhhHHHHHHHHHH
Confidence 632210 112222 1133433332333333555542221101 12245779999999997666 677777777777
Q ss_pred HHHHHH
Q psy9807 549 LTEELL 554 (561)
Q Consensus 549 ~~~~~~ 554 (561)
+..+.+
T Consensus 599 ~~~~~~ 604 (608)
T TIGR03811 599 AMQEKL 604 (608)
T ss_pred HHHHHH
Confidence 655443
No 7
>KOG0629|consensus
Probab=100.00 E-value=1.2e-65 Score=503.36 Aligned_cols=465 Identities=21% Similarity=0.309 Sum_probs=401.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCC
Q psy9807 20 NEFKDFAKAMVDYVGNYLENIRD--RRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFP 97 (561)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~ 97 (561)
+..+.++.++++.+.+|...--+ ..|.+...|++|+..++.++|++++++++|+++.++.+..+ +...|||||+...
T Consensus 31 ~~te~fl~~v~~~ll~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl~qil~~cr~tl~y~-vKTgHprffNQl~ 109 (510)
T KOG0629|consen 31 EVTEPFLRAVVDILLDYVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESLAQILEDCRDTLKYS-VKTGHPRFFNQLS 109 (510)
T ss_pred hhhHhhhHHHHHHHHHhhccCCcccceeecccChHHHHHHhCcccCCChhhHHHHHHHHHHHHHhh-hccCCCcchhhhc
Confidence 33488899999999999665444 47888999999999999999999999999999999987654 4579999999999
Q ss_pred CCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHH
Q psy9807 98 TANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKA 177 (561)
Q Consensus 98 ~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~ 177 (561)
++-.+.+++++|++++.|.|.++|+.+|.++-+|.++...+.++.||+.. ++|+|++||+.||++|+.+||.
T Consensus 110 ~glD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~--------~DgIf~pggsisn~Ya~~~Ary 181 (510)
T KOG0629|consen 110 SGLDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEG--------GDGIFAPGGSISNMYAMNCARY 181 (510)
T ss_pred cCCCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCC--------CCceecCCchhHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999874 5899999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhcc---CCeEEeeC-CCCccChhhHHHHHhhhchhhcCCce
Q psy9807 178 KTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWL---GKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDL 250 (561)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g---~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p 250 (561)
+..++.+..|- ...+++++|+|+ ||+.|++...| ..++.|++ ..|.|++++||+.|.+ .+++|..|
T Consensus 182 k~~Pe~K~~Gm-----~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile--~k~kg~~P 254 (510)
T KOG0629|consen 182 KNFPEVKTKGM-----FALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILE--AKAKGGVP 254 (510)
T ss_pred hcCchhhhhhh-----hcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccccCccchHHHHHHHHH--HHhcCCCC
Confidence 98776554321 124689999999 99999997665 47999999 9999999999999999 99999999
Q ss_pred EEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEe
Q psy9807 251 LQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWL 330 (561)
Q Consensus 251 ~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~ 330 (561)
++|.+|+|||+.|++|||..|+++|++|++|+||||||||+.+++..+|+.+.|+++|||+++++||++++|..|+++++
T Consensus 255 f~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~ 334 (510)
T KOG0629|consen 255 FFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLT 334 (510)
T ss_pred eEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhHHHhhccCCCccccCCC--CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 331 KDPSWVVNAFNVDPLYLKHDQQ--GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD 408 (561)
Q Consensus 331 r~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 408 (561)
|....+....+..+.||+.++- ....|..+..++|+|+.+.+++|..+++-|..|+++.++++.++|+||.++|++.+
T Consensus 335 r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~ 414 (510)
T KOG0629|consen 335 REEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLRERE 414 (510)
T ss_pred HHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999888877889999987652 33567889999999999999999999999999999999999999999999999999
Q ss_pred CeEEecc--ccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhc
Q psy9807 409 RFEVIYE--VLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 486 (561)
Q Consensus 409 g~~l~~~--~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~ 486 (561)
+++.+.. |+...|||-|.| ...|.- +..+++. .
T Consensus 415 ~~~~l~~~~pe~~nv~fw~vp----~~lR~~----------------------------------~~~~e~~----~--- 449 (510)
T KOG0629|consen 415 GFEMLFELEPEHVNVCFWYVP----PSLRGW----------------------------------QENPERD----S--- 449 (510)
T ss_pred cceehhcCCCceEEEeeccCc----hHhccC----------------------------------cccchhh----h---
Confidence 9888754 666777884443 322210 0011100 0
Q ss_pred ceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeEC-CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 487 LVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIR-DVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 487 ~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
....+...+..++.++|...++..... ...++|+.+.++..+++|++.+++.|..++++
T Consensus 450 -------rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 450 -------RLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred -------HHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhccC
Confidence 011223477889999999888765442 24589999999999999999999999988764
No 8
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-55 Score=463.12 Aligned_cols=439 Identities=20% Similarity=0.199 Sum_probs=354.9
Q ss_pred HHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHh-hcCCCCCCCCccccccCCCCCChHHHHHHHHH
Q psy9807 33 VGNYLENIRDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERV-IMPGVTHWHSPKFHAYFPTANSYPAIVADILS 111 (561)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~ 111 (561)
+.++....+.+...+...|.+-.......+|+.+.+.++++.++... +.+...++.||+++.|..+++.++.++.+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~ 83 (460)
T COG0076 4 LIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLV 83 (460)
T ss_pred HHHHHHhhccCCCccccccchhhhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHH
Confidence 44455554555544555555555556678999999999999999987 56666667799999999999999999999999
Q ss_pred hhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy9807 112 DSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWK 191 (561)
Q Consensus 112 ~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~ 191 (561)
..+|+|.+.|..+|.++++|++++.|+++++|+|.. ..|+||+|||+||++|+++||++..+...... ..
T Consensus 84 ~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~--------~~G~~t~GgTean~lal~aar~~~~~~~~~~~--~~ 153 (460)
T COG0076 84 SALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEE--------ASGTFTSGGTEANLLALLAARERWRKRALAES--GK 153 (460)
T ss_pred HHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCC--------CceEEEcChHHHHHHHHHHHHHHHHHHhhhcc--cc
Confidence 999999999999999999999999999999999865 47999999999999999999999875432210 00
Q ss_pred CcccccceEEeccc---chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc
Q psy9807 192 DSDIIANLIASPAC---TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD 266 (561)
Q Consensus 192 ~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id 266 (561)
. .+...|++|. +|+.|++++.|..++.+|+ . +.+||+++|+++|++ +...| +||+++|||.+|.+|
T Consensus 154 ~---~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~--~t~~g----~vV~~aGtT~~G~iD 224 (460)
T COG0076 154 P---GGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDE--NTIGG----VVVGTAGTTDTGSID 224 (460)
T ss_pred c---CCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHh--hccCc----eEEEEecCCCCCccC
Confidence 0 1122455554 9999999999999999999 5 899999999999999 66555 799999999999999
Q ss_pred CHHHHHHHHhhcCceEEechhcccccccCcccccc-ccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCC
Q psy9807 267 CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL-MKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPL 345 (561)
Q Consensus 267 pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~-~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~ 345 (561)
||++|+++|++|++|+|||||+||+.+...+.+.. ..+++.+|||++|+|||+++|++||++++||++.+.+.......
T Consensus 225 di~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~ 304 (460)
T COG0076 225 DIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADY 304 (460)
T ss_pred CHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccc
Confidence 99999999999999999999999999877777776 57899999999999999999999999999999878777777777
Q ss_pred ccccCCCCCCCCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeee
Q psy9807 346 YLKHDQQGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 424 (561)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~ 424 (561)
|+... ....+++.++|.. .++++|+.++.+|.+||+++++++.++++++++.|++.+.|+++++|.+++||||
T Consensus 305 yl~~~------~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr 378 (460)
T COG0076 305 YLPGG------GIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFR 378 (460)
T ss_pred cCCCC------CcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEE
Confidence 76542 2345667778875 7899999999999999999999999999999999999988999999999999999
Q ss_pred cccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHH
Q psy9807 425 LKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLK 504 (561)
Q Consensus 425 ~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~ 504 (561)
+++..-......+ ..+..+..+..
T Consensus 379 ~~~~~~~~~~~~~--------------------------------------------------------~~~~~gw~v~~ 402 (460)
T COG0076 379 LKDDEDTLADLSE--------------------------------------------------------RLDRRGWQVPA 402 (460)
T ss_pred cCCcccchhchHH--------------------------------------------------------HHHhcCceeec
Confidence 8552100000000 00111223445
Q ss_pred HHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 505 RINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 505 ~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.+...|..++..+...++..+++.+.++.++..+ +.+...+.+.++++
T Consensus 403 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 450 (460)
T COG0076 403 QLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE-ESLLALIEEPGREI 450 (460)
T ss_pred ccCCccceeeeeeEEeeeeeehhhcchhhhhhhh-HHHHHHhhhhhhhh
Confidence 5556666777777778888999998888877776 66666666555544
No 9
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=4.1e-54 Score=451.33 Aligned_cols=399 Identities=17% Similarity=0.173 Sum_probs=326.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHH
Q psy9807 59 PETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWL 138 (561)
Q Consensus 59 ~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~l 138 (561)
...+|++|.+.+++++++...+.. .+..||+|++|+++++.+. +.+++...+|++.+.|..+|..+++|+++++|+
T Consensus 14 ~~~~p~~~~~~~~~~~~~~~~iyl--d~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~l 89 (431)
T TIGR01788 14 KYRMPEEEMPPDAAYQLIHDELSL--DGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCVNML 89 (431)
T ss_pred cccCCCCCCCHHHHHHHHHHHhhh--cCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHHHHH
Confidence 358999999999999999987643 4567899999998766554 578888999988888889999999999999999
Q ss_pred HHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhc
Q psy9807 139 GKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDW 215 (561)
Q Consensus 139 a~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~ 215 (561)
++++|+++. .....|+|||||||||++|+.++|++...+.+..+. ...+..+++|. +|+.|+++..
T Consensus 90 a~llg~~~~-----~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~------~~~~~~ii~s~~~H~sv~ka~~~l 158 (431)
T TIGR01788 90 ADLWHAPAK-----DAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGK------PTDKPNLVMGSNVQVCWEKFARYF 158 (431)
T ss_pred HHHhCCCCC-----CCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCC------CCCCcEEEEcCcchHHHHHHHHHc
Confidence 999999821 001467889999999999999998654332221111 01234666666 9999999988
Q ss_pred cCCeEEeeC-CC-CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc------CceEEechh
Q psy9807 216 LGKMLDLPK-EF-LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK------DVWLHVDAA 287 (561)
Q Consensus 216 g~~v~~v~~-~~-g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~------~~~lhVDaA 287 (561)
|.+++.||+ .+ +.+|+++|+++|.+ .+++|++++|+|.+|++||+++|+++|+++ |+|+|||||
T Consensus 159 g~~v~~i~~d~~~~~vd~~~L~~~i~~--------~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaa 230 (431)
T TIGR01788 159 DVELREVPMDPGRYVIDPEQVVEAVDE--------NTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAA 230 (431)
T ss_pred CceeEEEecCCCceeeCHHHHHHHHhh--------CCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecc
Confidence 999999999 54 58999999999987 578999999999999999999999999999 999999999
Q ss_pred cccccc--cCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccC
Q psy9807 288 YAGSAF--ICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPL 365 (561)
Q Consensus 288 ~gg~~~--~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (561)
|||+++ ..++.+..+. ++.+||+++|+|||+++|+|||++++|+...+...+...+.|+... ..+.++++
T Consensus 231 q~g~~~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~-------~~~~t~~~ 302 (431)
T TIGR01788 231 SGGFIAPFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGD-------EPTFTLNF 302 (431)
T ss_pred cHHHHHHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCC-------CCCcceec
Confidence 998775 2444544443 6678999999999999999999999999766656667777887532 12357889
Q ss_pred cCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-ccccceeeecccCccccccccchhhHHH
Q psy9807 366 GRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCFRLKHWQIPLGRRFRSLKLWF 443 (561)
Q Consensus 366 sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~k~w~ 443 (561)
+|++ +++++|+.++.+|..|++++++++++++++|.+.|++.|+|+++.+ +..++||||+++..
T Consensus 303 sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~-------------- 368 (431)
T TIGR01788 303 SRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA-------------- 368 (431)
T ss_pred CchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC--------------
Confidence 9986 7899999999999999999999999999999999999999999987 78899888876421
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEE---EEeeeEC
Q psy9807 444 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIH---LVPSKIR 520 (561)
Q Consensus 444 ~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~---~~~~~~~ 520 (561)
+.+..+.++.++|.++|+++ .+|+.++
T Consensus 369 --------------------------------------------------~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~ 398 (431)
T TIGR01788 369 --------------------------------------------------DPGYTLYDLSHRLRERGWIVPAYTLPKNAE 398 (431)
T ss_pred --------------------------------------------------CCCcCHHHHHHHHHHCCCcccCCCCCCccC
Confidence 01122567899999999864 4566688
Q ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 521 DVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 521 g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
|..++|++++ ++++.+.++.+++.|+++...+
T Consensus 399 ~~~~lR~~~~-~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 399 DIVVMRIVVR-EGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CeEEEEEEec-CCCCHHHHHHHHHHHHHHHHhh
Confidence 9999999975 6778889999999999887654
No 10
>PLN02263 serine decarboxylase
Probab=100.00 E-value=4.3e-54 Score=447.18 Aligned_cols=310 Identities=16% Similarity=0.206 Sum_probs=269.9
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCccccccCCCCCCh-HHHHHHHHHhhccccccccccCh---hhHHHHHHHHHHHHHhcC
Q psy9807 68 TWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSY-PAIVADILSDSIACIGFTWIASP---ACTELEVVMLDWLGKMLD 143 (561)
Q Consensus 68 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~sp---~~~~lE~~~~~~la~l~g 143 (561)
.++++|+++.+.+.++..+ |||| |...++ ++.+++++...+|+.++.|..+| .++++|+++++|+++++|
T Consensus 74 ~~~~~l~~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g 147 (470)
T PLN02263 74 YMASVLARYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE 147 (470)
T ss_pred hHHHHHHHHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhC
Confidence 3699999999999887654 9999 777777 89999999999999999999998 799999999999999999
Q ss_pred CCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeE
Q psy9807 144 LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKML 220 (561)
Q Consensus 144 ~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~ 220 (561)
+|++ ..+|+||+|||+||++|+++||+.. ++.++|+|+ +|+.||+++.|.+++
T Consensus 148 ~p~~-------~~~G~vtsGGTEaNL~Al~aARe~~-----------------~~~vvy~S~~aH~Sv~KAa~llgi~~~ 203 (470)
T PLN02263 148 IEKN-------EYWGYITNCGTEGNLHGILVGREVF-----------------PDGILYASRESHYSVFKAARMYRMECV 203 (470)
T ss_pred CCCC-------CCeEEEeCcHHHHHHHHHHHHHhhc-----------------CCcEEEEcCCccHHHHHHHHhcCCcce
Confidence 9863 1379999999999999999999863 134677777 999999999999999
Q ss_pred EeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCc-----eEEechhccccccc
Q psy9807 221 DLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDV-----WLHVDAAYAGSAFI 294 (561)
Q Consensus 221 ~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~-----~lhVDaA~gg~~~~ 294 (561)
.||+ ++++||+++|+++|.+ +. .+|++|++|+|||.+|++|||++|+++|++||+ |+||||||||..+.
T Consensus 204 ~Vp~d~~g~mD~~aL~~aI~~--d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lP 278 (470)
T PLN02263 204 KVDTLVSGEIDCADFKAKLLA--NK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMP 278 (470)
T ss_pred EeccCCCCcCcHHHHHHHHHh--CC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhh
Confidence 9999 8999999999999987 53 379999999999999999999999999999997 99999999998774
Q ss_pred CccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc-chHH
Q psy9807 295 CPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF-RSLK 373 (561)
Q Consensus 295 ~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~-~al~ 373 (561)
..+....+.+.+.+|||++|+|||+++|++||++++|+.. ...+...+.|+... +.++.+||++ .+++
T Consensus 279 f~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~--~~~~~~~~~Yl~~~---------d~ti~gSR~g~~al~ 347 (470)
T PLN02263 279 FVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASR---------DATIMGSRNGHAPIF 347 (470)
T ss_pred hcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhh--HhhhccChHhhCCC---------CCCcCCCCCcHHHHH
Confidence 3333334556666999999999999999999999999643 25677888998653 2467899997 5899
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeee
Q psy9807 374 LWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 424 (561)
Q Consensus 374 lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~ 424 (561)
+|++|+.+|.+|++++++++.++|+++.++|++. +++++.+|..++|+|+
T Consensus 348 lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~ 397 (470)
T PLN02263 348 LWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFE 397 (470)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEe
Confidence 9999999999999999999999999999999998 7887777778887773
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=3e-46 Score=383.99 Aligned_cols=310 Identities=17% Similarity=0.215 Sum_probs=250.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccc---cChhhHHHHHHHHHHHHHhcCCC
Q psy9807 69 WQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWI---ASPACTELEVVMLDWLGKMLDLP 145 (561)
Q Consensus 69 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~---~sp~~~~lE~~~~~~la~l~g~~ 145 (561)
..++++.+.+.+. -++..|+||......-++.+..++....|+-+..+. .+..+.++|+++++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~-----~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~ 82 (374)
T PLN03032 8 MADILASYDKLLA-----EKSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE 82 (374)
T ss_pred HHHHHHHHHHHHH-----HhhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC
Confidence 4566777776654 356788999877666667787777776654333333 34478999999999999999998
Q ss_pred ccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEEe
Q psy9807 146 KEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLDL 222 (561)
Q Consensus 146 ~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v 222 (561)
++ ..+|+||+||||||++|+.++|+... +.++++|. +|+.|++++.+..++.|
T Consensus 83 ~~-------~~~G~fTsGGTEaNl~al~~ar~~~~-----------------~~~vi~s~~~H~Sv~kaa~~lg~~~~~V 138 (374)
T PLN03032 83 KD-------EYWGYITTCGTEGNLHGILVGREVFP-----------------DGILYASRESHYSVFKAARMYRMEAVKV 138 (374)
T ss_pred Cc-------cCCEEEeCchHHHHHHHHHHHHHhCC-----------------CcEEEeCCCceeHHHHHHHHcCCCCeEe
Confidence 64 13689999999999999999987520 12445554 99999999999999999
Q ss_pred eC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC-----ceEEechhcccccccCc
Q psy9807 223 PK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD-----VWLHVDAAYAGSAFICP 296 (561)
Q Consensus 223 ~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~-----~~lhVDaA~gg~~~~~~ 296 (561)
|+ .+|+||+++|+++|++ +. ..|++|++++|+|.+|++||+++|+++|++|| +|+|||||+|++.+...
T Consensus 139 ~~d~~g~id~~~L~~~i~~--~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~ 213 (374)
T PLN03032 139 PTLPSGEIDYDDLERALAK--NR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFV 213 (374)
T ss_pred eeCCCCcCcHHHHHHHHHH--cC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhcc
Confidence 99 8999999999999987 42 26889999999999999999999999999996 59999999998766432
Q ss_pred cccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHH
Q psy9807 297 ENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLW 375 (561)
Q Consensus 297 ~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw 375 (561)
.....++....+||+++|+|||+++|+|||++++|+.. + ..+...+.|+... ++++++||+ ++++++|
T Consensus 214 ~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~-~-~~~~~~~~Yl~~~---------d~ti~gSR~g~~~l~~w 282 (374)
T PLN03032 214 SRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKH-V-KALSQNVEYLNSR---------DATIMGSRNGHAPLYLW 282 (374)
T ss_pred CCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchh-h-HhhccCCcccCCC---------CCcccCCCchHHHHHHH
Confidence 21222222345799999999999999999999999743 3 3466778887542 368899997 6899999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeee
Q psy9807 376 FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 424 (561)
Q Consensus 376 ~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~ 424 (561)
++|+.+|.+|+.++++++.++|+++.+.|++. +++++.+|..++|+|+
T Consensus 283 ~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~ 330 (374)
T PLN03032 283 YTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFE 330 (374)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEc
Confidence 99999999999999999999999999999986 8888777778887773
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=2.2e-45 Score=380.54 Aligned_cols=306 Identities=19% Similarity=0.203 Sum_probs=250.3
Q ss_pred HHHHHHHHHhhcCCCCCCCCccccccCCCCCCh-HHHHHHHHHhhccccccccccCh----hhHHHHHHHHHHHHHhcCC
Q psy9807 70 QEVMSDIERVIMPGVTHWHSPKFHAYFPTANSY-PAIVADILSDSIACIGFTWIASP----ACTELEVVMLDWLGKMLDL 144 (561)
Q Consensus 70 ~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~sp----~~~~lE~~~~~~la~l~g~ 144 (561)
.+.|+++...+. +||+||.++|...++ ++.+.+++....|+.+ .+...+ .++++|+++++|+++++|+
T Consensus 8 ~~~~~~~~~~~~------~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~g-np~~~~~~g~~~~~~e~~~~~~~a~l~g~ 80 (380)
T PRK02769 8 QKEIEDFWLYLR------HNQYFNVGYPEAADFDYSALKRFFSFSINNCG-DPYSKSNYPLNSFDFERDVMNFFAELFKI 80 (380)
T ss_pred HHHHHHHHHHHH------HhhhcccCCCchhhcCHHHHHHHHHhhhccCC-CccccCCCCCChHHHHHHHHHHHHHHhCC
Confidence 566677766553 688888888877766 5889999888887643 444455 4789999999999999999
Q ss_pred CccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEE
Q psy9807 145 PKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLD 221 (561)
Q Consensus 145 ~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~ 221 (561)
++. ..+|+||+|||+||+.|++++|++. +...+++|+ +|+.|+++..|.+.+.
T Consensus 81 ~~~-------~~~G~~TsGgTean~~a~~~ar~~~-----------------~~~~ii~s~~~H~Sv~ka~~~lg~~~~~ 136 (380)
T PRK02769 81 PFN-------ESWGYITNGGTEGNLYGCYLARELF-----------------PDGTLYYSKDTHYSVSKIARLLRIKSRV 136 (380)
T ss_pred CCC-------CCCEEEecChHHHHHHHHHHHHHhC-----------------CCcEEEeCCCceehHHHHHHHcCCCCce
Confidence 854 1368999999999999999998742 012344443 9999999998999999
Q ss_pred eeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC---ceEEechhcccccccCcc
Q psy9807 222 LPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD---VWLHVDAAYAGSAFICPE 297 (561)
Q Consensus 222 v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~---~~lhVDaA~gg~~~~~~~ 297 (561)
||+ ++|+||+++|+++|.+ + +.+|++|++++|+|.+|++||+++|+++|++|| +|+|||||||++.+...+
T Consensus 137 V~~~~~g~id~~~L~~~i~~--~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~ 211 (380)
T PRK02769 137 ITSLPNGEIDYDDLISKIKE--N---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVN 211 (380)
T ss_pred eccCCCCcCcHHHHHHHHHh--C---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccC
Confidence 999 8899999999999987 4 557999999999999999999999999999998 799999999997775443
Q ss_pred ccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHH
Q psy9807 298 NRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWF 376 (561)
Q Consensus 298 ~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~ 376 (561)
.+..++..+.+||+++|+|||+++|+|||++++|+.. +. .+.....|+.. .+.++.+||+ +.++++|.
T Consensus 212 ~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~-~~-~~~~~~~yl~~---------~d~t~~GSR~g~~~l~lw~ 280 (380)
T PRK02769 212 NPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKY-VE-RISVDVDYIGS---------RDQTISGSRNGHTALLLWA 280 (380)
T ss_pred ccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhh-hh-hcccCccccCC---------CCCCccCCCCcHHHHHHHH
Confidence 3333333346799999999999999999999999753 32 24445677643 2357789996 67999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceee
Q psy9807 377 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 423 (561)
Q Consensus 377 ~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f 423 (561)
+++.+|.+|++++++++.++++++.++|++. |++++.+|..++|+|
T Consensus 281 aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f 326 (380)
T PRK02769 281 AIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVF 326 (380)
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEE
Confidence 9999999999999999999999999999885 999988888888777
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=7e-42 Score=354.02 Aligned_cols=340 Identities=35% Similarity=0.505 Sum_probs=280.9
Q ss_pred ccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVA 171 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~a 171 (561)
||+++++++.+++++++++...+|++...|..+|..+++|+++++|+++++|++.. ...++||+|||+||+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~-------~~~~~~t~ggt~a~~~a 73 (345)
T cd06450 1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSE-------DADGVFTSGGSESNLLA 73 (345)
T ss_pred CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCC-------CCCEEEeCChhHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999721 13789999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcC
Q psy9807 172 LLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMC 247 (561)
Q Consensus 172 l~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g 247 (561)
+.+++.+..++.+..+ .+..++.+++++. +++.+++...|.+++.+|+ +++.+|+++|+++|.+ +..++
T Consensus 74 l~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~ 146 (345)
T cd06450 74 LLAARDRARKRLKAGG-----GRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDE--DKAEG 146 (345)
T ss_pred HHHHHHHhhhhhhccc-----ccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHH--HHHCC
Confidence 9998876433211100 0011233455444 8888998888999999999 7789999999999988 77777
Q ss_pred CceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccccee
Q psy9807 248 SDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSA 327 (561)
Q Consensus 248 ~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~ 327 (561)
.++.+|+++.+++.+|.++|+++|+++|++||+|+|||+||+++....+..+....+++.+|++++++|||+++|+++|+
T Consensus 147 ~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~ 226 (345)
T cd06450 147 LNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSA 226 (345)
T ss_pred CCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHH
Confidence 77889999999999999999999999999999999999999987765444333333445679999999999999999999
Q ss_pred EEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 328 MWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 328 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
++++ ++++|.+++.++..|+++++++..++++++.+.|+++
T Consensus 227 ~~~~---------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~ 267 (345)
T cd06450 227 VLVR---------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRAD 267 (345)
T ss_pred HHHH---------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8775 6678999999999999999999999999999999999
Q ss_pred CCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcc
Q psy9807 408 DRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 487 (561)
Q Consensus 408 ~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~ 487 (561)
++++++.++..++++|++.+..
T Consensus 268 ~~~~~~~~~~~~iv~f~~~~~~---------------------------------------------------------- 289 (345)
T cd06450 268 PGFELLGEPNLSLVCFRLKPSV---------------------------------------------------------- 289 (345)
T ss_pred CCeEEecCCceeEEEEEECCcc----------------------------------------------------------
Confidence 9999887777888777653210
Q ss_pred eeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9807 488 VCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKT 548 (561)
Q Consensus 488 v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 548 (561)
..+..+.++.++|.++|.+++.+....+..++|+++++++|+++||++++++|++
T Consensus 290 ------~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 290 ------KLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ------hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 0022345788999999888777666667789999999888899999999999875
No 14
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=5.7e-32 Score=282.76 Aligned_cols=365 Identities=16% Similarity=0.219 Sum_probs=259.5
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCc
Q psy9807 67 DTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPK 146 (561)
Q Consensus 67 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~ 146 (561)
.+.+++|+.+.+.-.++.. .. |||+...+.+. +.+. +.+...++.+.+.....|...++++++.+++++++|.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~-~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~ 76 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLK-YE--RILSSMCTEPH-PIAR-KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD 76 (371)
T ss_pred CCHHHHHHHHHHHHhcCCC-HH--HeeeeeecCch-HHHH-HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC
Confidence 3568899999887666543 23 58888755443 3433 333333333322222235677888999999999999976
Q ss_pred cccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-
Q psy9807 147 EFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK- 224 (561)
Q Consensus 147 ~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~- 224 (561)
. .++|++|||++|..++.+++..... + .+++++.... +++.+++...|.+++.+|.
T Consensus 77 ~---------~~~~~~ggt~a~~~a~~~~~~~~~~------~-------~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~ 134 (371)
T PRK13520 77 A---------YGYITSGGTEANIQAVRAARNLAKA------E-------KPNIVVPESAHFSFDKAADMLGVELRRAPLD 134 (371)
T ss_pred C---------CeEEecCcHHHHHHHHHHHHhhccC------C-------CceEEecCcchHHHHHHHHHcCceEEEecCC
Confidence 4 5799999999999998877643100 0 1234444444 8899988888999999999
Q ss_pred CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccC-cccccccc
Q psy9807 225 EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFIC-PENRYLMK 303 (561)
Q Consensus 225 ~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~-~~~~~~~~ 303 (561)
+++.+|+++|+++|.+ .+.+|+.+.++|.+|.++|+++|+++|++||+++|||+||+++.+.. ......-.
T Consensus 135 ~~~~~d~~~l~~~i~~--------~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~ 206 (371)
T PRK13520 135 DDYRVDVKAVEDLIDD--------NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDF 206 (371)
T ss_pred CCCcCCHHHHHHHHhh--------CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccc
Confidence 7889999999999976 35567788889999999999999999999999999999998765321 11100001
Q ss_pred CccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhh
Q psy9807 304 GVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLG 382 (561)
Q Consensus 304 gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g 382 (561)
....+|++++++|||+++|.++|+++++++..+.. +....+|+.... .+...++|. ..+..+|.+++.++
T Consensus 207 ~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~-l~~~~~~~~~~~--------~~~~~gt~~~~~~~~~~~al~~l~ 277 (371)
T PRK13520 207 SLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDA-LAVDTPYLTSKK--------QATLTGTRSGAGVAATYAVMKYLG 277 (371)
T ss_pred cCCCCceEEECCccccCccCCceEEEEcCHHHHHh-hcccCccccCCC--------CcceEeeccChHHHHHHHHHhhhc
Confidence 12346999999999999999999999987654432 333334543211 112233443 35678899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHH
Q psy9807 383 VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQIS 462 (561)
Q Consensus 383 ~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~ 462 (561)
.+|++++.++..++++++.+.|++. |++++.++..++++|++
T Consensus 278 ~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~------------------------------------- 319 (371)
T PRK13520 278 REGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDD------------------------------------- 319 (371)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEec-------------------------------------
Confidence 9999999999999999999999988 88855455555655432
Q ss_pred HHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHH
Q psy9807 463 LAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYS 542 (561)
Q Consensus 463 ~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l 542 (561)
.+ ..++.++|.+.|... ... .+..++|+|++ ++++++||+++
T Consensus 320 ------------------------------~~----~~~v~~~L~~~gi~v-~~~--~~~~~iRis~~-~~~t~edi~~~ 361 (371)
T PRK13520 320 ------------------------------PN----PDEVREKLRERGWRV-SVT--RCPEALRIVCM-PHVTREHIENF 361 (371)
T ss_pred ------------------------------CC----HHHHHHHHHHCCcee-ccC--CCCCEEEEEEE-CCCCHHHHHHH
Confidence 21 346788888887543 322 23458999966 47899999999
Q ss_pred HHHHHHHHH
Q psy9807 543 WNEIKTLTE 551 (561)
Q Consensus 543 ~~~l~~~~~ 551 (561)
+++|+++.+
T Consensus 362 ~~~l~~~~~ 370 (371)
T PRK13520 362 LEDLKEVKK 370 (371)
T ss_pred HHHHHHHhh
Confidence 999987643
No 15
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.7e-32 Score=280.15 Aligned_cols=348 Identities=14% Similarity=0.082 Sum_probs=252.1
Q ss_pred cccccCCCCCChHHHHHHHHHh-----hccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh
Q psy9807 91 KFHAYFPTANSYPAIVADILSD-----SIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 165 (561)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~-----~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT 165 (561)
-||++..++..+..++ +.+.. .-|.+.+.+..+..+++.++++++.+++++|.++. ...+||+|.|
T Consensus 24 vylD~aa~~~~p~~V~-~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~--------~eIvft~~tT 94 (405)
T COG0520 24 VYLDNAATSQKPQAVL-DAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS--------DEIVFTRGTT 94 (405)
T ss_pred EEecCcccccCCHHHH-HHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC--------CeEEEeCChh
Confidence 5888887766444443 33333 23455557778888899999999999999999852 3789999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-----chHHHHHHhccCCeEEeeC-CCCccChhhHHHHH
Q psy9807 166 EAT-LVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-----TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVI 238 (561)
Q Consensus 166 ~an-l~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-----~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i 238 (561)
++. +.+....+.. . -++++++...+ .+|...++..|.+++.+|. +++.++.+++++.+
T Consensus 95 ~aln~va~~l~~~~--~-------------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i 159 (405)
T COG0520 95 EALNLVARGLGRSL--K-------------PGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLI 159 (405)
T ss_pred HHHHHHHHHhhhhh--c-------------CCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhc
Confidence 994 4433333221 0 02356666555 6777777888999999999 89999999999988
Q ss_pred hhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcc
Q psy9807 239 QRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKW 318 (561)
Q Consensus 239 ~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~ 318 (561)
.+ ++++|++++.++.+|.+.|+++|+++||++|+|+.|||||+.+....+ ++.+ .+|++++++|||
T Consensus 160 ~~--------~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~id-----v~~l-~~Df~afsgHKw 225 (405)
T COG0520 160 TP--------KTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPID-----VQEL-GCDFLAFSGHKW 225 (405)
T ss_pred CC--------CceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCC-----chhc-CCCEEEEccccc
Confidence 77 789999999999999999999999999999999999999997665543 2111 569999999999
Q ss_pred ccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCC-Ccccc-cCcCCc--------chHHHHHHHHHhhHHHHHH
Q psy9807 319 MLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDY-RHWQI-PLGRRF--------RSLKLWFVLRLLGVKYLQE 388 (561)
Q Consensus 319 l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~-~~~~~-~~sr~~--------~al~lw~~l~~~g~~g~~~ 388 (561)
|++|.|+|+||+|+.. +... .++..........+. ...++ +..++| .++.+-.+++++...|+++
T Consensus 226 l~gP~GiGvLy~r~~~-l~~l----~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~ 300 (405)
T COG0520 226 LLGPTGIGVLYVRKEL-LEEL----EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEA 300 (405)
T ss_pred ccCCCceEEEEEchHH-Hhhc----CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHH
Confidence 9999999999998752 2221 222221110000010 01111 112222 3566778899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEeccc---cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHH
Q psy9807 389 YIRKQISLAKEFEQLVRSDDRFEVIYEV---LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAK 465 (561)
Q Consensus 389 ~~~~~~~la~~l~~~l~~~~g~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~ 465 (561)
+.++...+++++.+.|+++|+++++.++ ..++++|++.+.
T Consensus 301 i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~------------------------------------- 343 (405)
T COG0520 301 IEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI------------------------------------- 343 (405)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC-------------------------------------
Confidence 9999999999999999999999999875 466766655432
Q ss_pred HHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE--------CCEEEEEEEecCCCCCHH
Q psy9807 466 EFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI--------RDVYFLRMAVCSRYSESS 537 (561)
Q Consensus 466 ~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--------~g~~~lR~~~~~~~t~~~ 537 (561)
-+.++...|.++|++...+... .-...+|+|+. +++|++
T Consensus 344 --------------------------------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~-~YNt~e 390 (405)
T COG0520 344 --------------------------------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLH-LYNTEE 390 (405)
T ss_pred --------------------------------CHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEe-ecCCHH
Confidence 1457888899998433333211 11223999976 566888
Q ss_pred HHHHHHHHHHHHHH
Q psy9807 538 DMIYSWNEIKTLTE 551 (561)
Q Consensus 538 di~~l~~~l~~~~~ 551 (561)
|||+++++|+++.+
T Consensus 391 did~l~~aL~~~~~ 404 (405)
T COG0520 391 DVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988753
No 16
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=7.9e-31 Score=274.37 Aligned_cols=364 Identities=19% Similarity=0.222 Sum_probs=254.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccc
Q psy9807 69 WQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEF 148 (561)
Q Consensus 69 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~ 148 (561)
-+++++++.+ +..++...++++++..+.+.+.++. .. .+...+..+.......|...++++++.+++++++|+++.
T Consensus 2 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~- 77 (373)
T TIGR03812 2 EEEVLEELKE-YRSEDLKYSDGRILGSMCTNPHPIA-VK-AYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDA- 77 (373)
T ss_pred HHHHHHHHHH-HHhcCCCCCCCcEEEEEeCCchHHH-HH-HHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC-
Confidence 4789999988 4556667789998888765554442 22 222222222222222356678899999999999999764
Q ss_pred cccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CC
Q psy9807 149 LACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EF 226 (561)
Q Consensus 149 ~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~ 226 (561)
.+++++|||++|+.++.+++...... .+ ++.+++.... +++.++++..|.+++.+|. .+
T Consensus 78 --------~~~~~~g~~~~~~~~~~~~~~~~~~~----~~-------g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~ 138 (373)
T TIGR03812 78 --------YGYIVSGGTEANIQAVRAAKNLAREE----KR-------TPNIIVPESAHFSFEKAAEMLGLELRYAPLDED 138 (373)
T ss_pred --------CeEEeccHHHHHHHHHHHHHHHHhcc----CC-------CcEEEECCcchHHHHHHHHHcCCeEEEEeeCCC
Confidence 57899999999988887665421100 00 1234433333 8888888888999999998 78
Q ss_pred CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccc----cccc
Q psy9807 227 LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPEN----RYLM 302 (561)
Q Consensus 227 g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~----~~~~ 302 (561)
+.+|+++|++++.+ .+..++.+.+++.+|.++|+++|+++|+++|+|+|||+||+++.+..... ....
T Consensus 139 ~~~d~~~l~~~l~~--------~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d 210 (373)
T TIGR03812 139 YTVDVKDVEDLIDD--------NTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD 210 (373)
T ss_pred CCcCHHHHHHHHhh--------CcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc
Confidence 89999999999976 23445555678999999999999999999999999999998664321100 0100
Q ss_pred cCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHh
Q psy9807 303 KGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLL 381 (561)
Q Consensus 303 ~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~ 381 (561)
-....+|++++++|||+.+|.++|.+++++++.+.. +....+|+.... .....++|. .....+|.+++.+
T Consensus 211 ~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~-l~~~~~~~~~~~--------~~~~~gt~~~~~~~~~~~~l~~l 281 (373)
T TIGR03812 211 FSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKY-LSVDAPYLTVKK--------QATITGTRSGASAAATYAVIKYL 281 (373)
T ss_pred ccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhh-hcccCcccCCCC--------CcceEeechhHHHHHHHHHHHHh
Confidence 011245999999999999999999888877655432 333344543211 112234554 4567889999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHH
Q psy9807 382 GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQI 461 (561)
Q Consensus 382 g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~ 461 (561)
+.+|++++.++..++++++++.|+++ +++.+.++..++|+|+
T Consensus 282 ~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~------------------------------------- 323 (373)
T TIGR03812 282 GREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFE------------------------------------- 323 (373)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEE-------------------------------------
Confidence 99999999999999999999999998 5654444555565543
Q ss_pred HHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHH
Q psy9807 462 SLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIY 541 (561)
Q Consensus 462 ~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~ 541 (561)
.++ ..++.++|.+.|.+ +... .+..++|++++. +++++|+++
T Consensus 324 ------------------------------~~~----~~~v~~~L~~~gi~-v~~~--~~~~~iRis~~~-~~t~edid~ 365 (373)
T TIGR03812 324 ------------------------------VDD----PEEVRKKLRDRGWY-VSVT--RCPKALRIVVMP-HVTREHIEE 365 (373)
T ss_pred ------------------------------eCC----HHHHHHHHHHCCce-eccC--CCCCEEEEEEEC-CCCHHHHHH
Confidence 221 23678888888754 3332 234589999775 678899999
Q ss_pred HHHHHHH
Q psy9807 542 SWNEIKT 548 (561)
Q Consensus 542 l~~~l~~ 548 (561)
++++|++
T Consensus 366 l~~~L~~ 372 (373)
T TIGR03812 366 FLEDLKE 372 (373)
T ss_pred HHHHHhh
Confidence 9999975
No 17
>KOG1383|consensus
Probab=99.98 E-value=7.4e-30 Score=255.25 Aligned_cols=386 Identities=15% Similarity=0.151 Sum_probs=294.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCcc-ccccCCCCCChHHHHHHHHHhhccc-cccccccChhhHHHHHHHHH
Q psy9807 59 PETAPDTPDTWQEVMSDIERVIMPGVTHWHSPK-FHAYFPTANSYPAIVADILSDSIAC-IGFTWIASPACTELEVVMLD 136 (561)
Q Consensus 59 ~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~~~~ 136 (561)
...+|++|.+-+++++.+.+...-....+..+. +.-|.. .+..-. ++...+|. |...-+.-|..+++|.++++
T Consensus 53 ~~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~-~~~~~~----l~~~~~~k~N~l~~d~fp~~~~~e~~~Vn 127 (491)
T KOG1383|consen 53 FFTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWG-EPELDK----LIMEAYNKFNPLHPDEFPVVRKLEAECVN 127 (491)
T ss_pred eecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecC-Ccchhh----HHHHHHhhcCccCccccchhHHHHHHHHH
Confidence 357899999999999999887643332222232 222222 223323 33333443 44556778999999999999
Q ss_pred HHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-ccceEEeccc-chHHHHHHh
Q psy9807 137 WLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDI-IANLIASPAC-TELEVVMLD 214 (561)
Q Consensus 137 ~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~-~~~~vv~~s~-~s~~kaa~~ 214 (561)
+++.||+.|++ ..|..|+|||+|.+.+....|++.... . ++ .+.+++..+. .+++|+++.
T Consensus 128 m~~~L~~~~~~--------~~g~~t~G~Ses~l~~~k~~~~~r~~~---k-------~I~~p~iv~~~~v~~a~eK~a~y 189 (491)
T KOG1383|consen 128 MIANLFNAPSD--------SCGCGTVGGSESGLAAKKSYRNRRKAQ---K-------GIDKPNIVTPQNVHAAFEKAARY 189 (491)
T ss_pred HHHHHhcCCcc--------ccCccccccchHHHHHHHHHHHHHHhc---c-------CCCCccccchHHHHHHHHHHHhh
Confidence 99999999864 478999999999776666665554331 0 11 1234444444 999999999
Q ss_pred ccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh-cCceEEechhcccc
Q psy9807 215 WLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ-KDVWLHVDAAYAGS 291 (561)
Q Consensus 215 ~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~-~~~~lhVDaA~gg~ 291 (561)
.+.+++.||. .++++|+..+.+.+++ ++++|+++++++.+|.+||+++|+++.-+ +++.+|||+|-||+
T Consensus 190 f~v~l~~V~~~~~~~~~D~~k~~~~i~e--------Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgF 261 (491)
T KOG1383|consen 190 FEVELREVPLDEGDYRVDPGKVVRMIDE--------NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGF 261 (491)
T ss_pred EEEEEEeeeccccceEecHHHHHHHhcc--------ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccc
Confidence 9999999999 7899999999999998 78999999999999999999999999999 99999999999987
Q ss_pred ccc-C----ccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 292 AFI-C----PENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 292 ~~~-~----~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
... . .++.....++ -|++.|.||..++|.|+|.++.|+++.+...+-....|+.. .+...++.+|
T Consensus 262 i~p~~~~~~~~fdFr~p~V---~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg-------~y~s~TlngS 331 (491)
T KOG1383|consen 262 INPAGYLNEEEFDFRVPGV---TSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGG-------IYASPTLNGS 331 (491)
T ss_pred cccccccCccccccCCCCc---eeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCc-------cccCcccccC
Confidence 663 1 1333334444 99999999999999999999999998877767677777643 2445688899
Q ss_pred CC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHH
Q psy9807 367 RR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVL 445 (561)
Q Consensus 367 r~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~ 445 (561)
|+ +.....|+++-.+|.+||.+..+++.+.+++|++.|++++++.++.+|...++.|.-.
T Consensus 332 R~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~------------------- 392 (491)
T KOG1383|consen 332 RPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSN------------------- 392 (491)
T ss_pred CcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCC-------------------
Confidence 97 4567789999999999999999999999999999999999999998866666555221
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHH-HHHHHHHHhCCcEEEEeeeECCEEE
Q psy9807 446 RLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEIN-EKLLKRINGNGKIHLVPSKIRDVYF 524 (561)
Q Consensus 446 ~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~-~~l~~~L~~~g~~~~~~~~~~g~~~ 524 (561)
..+ -++.+.|.+.|..+...+.+. .
T Consensus 393 ---------------------------------------------------~~~i~elsd~l~~~GW~lnalq~P~---a 418 (491)
T KOG1383|consen 393 ---------------------------------------------------DVNIFELSDLLRKKGWILNALQFPA---A 418 (491)
T ss_pred ---------------------------------------------------ccchhhhhHHHHhcCcCccccCCCC---c
Confidence 112 267788888998876655544 3
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Q psy9807 525 LRMAVCSRYSESSDMIYSWNEIKTLTEELLKEEK 558 (561)
Q Consensus 525 lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~~~ 558 (561)
+-++++--++.++-.++++..|+++.+++.+.+.
T Consensus 419 ~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~ 452 (491)
T KOG1383|consen 419 IHICVTRVHAREDVADRFVADIRKVVEELKSLPE 452 (491)
T ss_pred eEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4555555566666679999999999988876543
No 18
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=4.1e-29 Score=250.73 Aligned_cols=342 Identities=14% Similarity=0.092 Sum_probs=243.2
Q ss_pred ccccccCCCCCChHHHHHHHHHh---h-ccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh
Q psy9807 90 PKFHAYFPTANSYPAIVADILSD---S-IACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 165 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~---~-~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT 165 (561)
+-||+|-.+++..|.++..|+.. . -|+++ .+..+-.+..+-+++++.+++++|.++. ..+||||||
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~---------eIiFTSG~T 71 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPE---------EIIFTSGAT 71 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEecCCc
Confidence 46899998888888877665543 3 35555 7778888889999999999999999875 789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhc---cCCeEEeeC-CCCccChhhHHHHHhh
Q psy9807 166 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDW---LGKMLDLPK-EFLACSGGKGGGVIQR 240 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~---g~~v~~v~~-~~g~~d~~~Le~~i~~ 240 (561)
|+|..|+..+......+ ..+..+++...+ .++...++.. |.+|..+|+ .+|.+|+++|+++|++
T Consensus 72 EsnNlaI~g~~~a~~~~-----------~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~ 140 (386)
T COG1104 72 ESNNLAIKGAALAYRNA-----------QKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRP 140 (386)
T ss_pred HHHHHHHHhhHHhhhcc-----------cCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCC
Confidence 99999998753332111 012245555555 8888887544 789999999 8999999999999988
Q ss_pred hchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccc
Q psy9807 241 KSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWML 320 (561)
Q Consensus 241 ~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~ 320 (561)
.+.+|.+.+.++.+|.+.||++|+++|+++|+++|||++++.+.+..+-.. + .+|++++|+|| ++
T Consensus 141 --------~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~-----~-~vD~ls~SaHK-~~ 205 (386)
T COG1104 141 --------DTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEE-----L-GVDLLSFSAHK-FG 205 (386)
T ss_pred --------CceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccc-----c-CcceEEeehhh-cc
Confidence 578999999999999999999999999999999999999997766554211 1 25999999999 66
Q ss_pred ccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcc-----hHHHHHHHHHhhHHHHHHHHHHHHH
Q psy9807 321 VTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFR-----SLKLWFVLRLLGVKYLQEYIRKQIS 395 (561)
Q Consensus 321 ~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~-----al~lw~~l~~~g~~g~~~~~~~~~~ 395 (561)
+|.|+|++|+|+...+. +.+.... .+.++|.. ++.-......+..+.++....+...
T Consensus 206 GpkGiGaLyv~~~~~~~-------p~i~GGg-----------QE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~ 267 (386)
T COG1104 206 GPKGIGALYVRPGVRLE-------PLIHGGG-----------QERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRK 267 (386)
T ss_pred CCCceEEEEECCCCccC-------ceeccCc-----------CCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999997643332 1221111 11122221 1111122223445667778888899
Q ss_pred HHHHHHHHHhcC-CCeEEeccc---cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHh
Q psy9807 396 LAKEFEQLVRSD-DRFEVIYEV---LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLV 471 (561)
Q Consensus 396 la~~l~~~l~~~-~g~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l 471 (561)
+.++|.+.|.+. |++.+...+ -.++++|.+.+.
T Consensus 268 lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv------------------------------------------- 304 (386)
T COG1104 268 LRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGV------------------------------------------- 304 (386)
T ss_pred HHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCC-------------------------------------------
Confidence 999999999975 888876543 224444433321
Q ss_pred ccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee-------------------eECCEEEEEEEecCC
Q psy9807 472 RSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS-------------------KIRDVYFLRMAVCSR 532 (561)
Q Consensus 472 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-------------------~~~g~~~lR~~~~~~ 532 (561)
. .+.+.-.|...|+...++. ...-...||||++ .
T Consensus 305 ------------------------~--gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g-~ 357 (386)
T COG1104 305 ------------------------E--GESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLG-R 357 (386)
T ss_pred ------------------------c--HHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcC-C
Confidence 1 2344455554443333211 0122468999977 6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 533 YSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 533 ~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
.|+++||+++++++.++.+++.+
T Consensus 358 ~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 358 FTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhh
Confidence 88999999999999999888654
No 19
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.96 E-value=1.3e-26 Score=257.48 Aligned_cols=380 Identities=10% Similarity=0.044 Sum_probs=264.1
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChh-----hHHHHHHHHHHHHHhc
Q psy9807 68 TWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPA-----CTELEVVMLDWLGKML 142 (561)
Q Consensus 68 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~-----~~~lE~~~~~~la~l~ 142 (561)
+-.+++..+.+.-..+.. ..+ .|++--.+ ..+...+.+++...++.....+...|. ..+++.+...|++++.
T Consensus 467 sE~e~~r~~~~L~~kn~~-~~~-~fi~lGsc-tmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~elt 543 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLA-LNN-SMIPLGSC-TMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSIT 543 (939)
T ss_pred CHHHHHHHHHHHHhcCCC-ccc-cCCCCccC-CCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHH
Confidence 677888887775433322 122 34443322 233445667776666665556666776 8899999999999999
Q ss_pred CCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc--c-chHHHHHHhccCCe
Q psy9807 143 DLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA--C-TELEVVMLDWLGKM 219 (561)
Q Consensus 143 g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s--~-~s~~kaa~~~g~~v 219 (561)
|++. .++..++|+++++++++++|...-.+ +. .++-+|+++ . .+..+++...|.++
T Consensus 544 Gmd~----------~Sl~p~aGA~gE~agL~aiR~y~~~r----ge-------~~R~~vlip~saHgtnPasa~~~G~~V 602 (939)
T TIGR00461 544 GFDA----------ISLQPNSGAQGEYAGLRVIRSYHESR----GE-------NHRNICLIPVSAHGTNPASAAMAGMQV 602 (939)
T ss_pred CCCC----------cccCCchHHHHHHHHHHHHHHHHHhc----CC-------CCCCEEEEEccccCcCHHHHHHCCCEE
Confidence 9984 46899999999999999998754111 10 123334333 3 67777788889999
Q ss_pred EEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC-HHHHHHHHhhcCceEEechhcccccccCcc
Q psy9807 220 LDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC-LEEIGQVCRQKDVWLHVDAAYAGSAFICPE 297 (561)
Q Consensus 220 ~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp-l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~ 297 (561)
+.||+ .+|.+|+++|+++|++ .+..+.+|++|.++| +|.++| +++|+++||++|.|++||||+..+......
T Consensus 603 v~V~~d~~G~iDle~L~~~i~~-----~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~ 676 (939)
T TIGR00461 603 VPVNCDQDGNIDLVDLKNKAEQ-----HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTS 676 (939)
T ss_pred EEeccCCCCCcCHHHHHHHHhh-----cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCC
Confidence 99999 8999999999999975 233688999999998 699977 999999999999999999998653332211
Q ss_pred ccccccCccccceeeecCCccccccccc-----eeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcch-
Q psy9807 298 NRYLMKGVELADSFNFNPHKWMLVTFDC-----SAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRS- 371 (561)
Q Consensus 298 ~~~~~~gi~~aDsi~~~~HK~l~~P~g~-----g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~a- 371 (561)
.+...||++++|.||+|+.|.|+ |++.+|+. +...+... ......+..+. -.+.+...++.+++
T Consensus 677 -----Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~-~v~~t~d~~gr--eq~Iga~s~~~~g~a 746 (939)
T TIGR00461 677 -----PGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKH-DVVSMITGIGG--SKSIGSVSAAPYGSA 746 (939)
T ss_pred -----ccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCC-cccccccCCCC--ccccccccccccCcH
Confidence 13345799999999999977766 99999863 22222111 11010000000 01112223344444
Q ss_pred ---HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccc----cceeeecccCccccccccchhhHHHH
Q psy9807 372 ---LKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLM----GLVCFRLKHWQIPLGRRFRSLKLWFV 444 (561)
Q Consensus 372 ---l~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~----~~v~f~~~~~~~~~~~~~~~~k~w~~ 444 (561)
++.|+.++.+|.+|+++..+....+|+|++++|++ +++++.+... .-++|++++..
T Consensus 747 ~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~--------------- 809 (939)
T TIGR00461 747 SILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK--------------- 809 (939)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh---------------
Confidence 88999999999999999999999999999999987 5677654322 33555544310
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee-eECCEE
Q psy9807 445 LRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS-KIRDVY 523 (561)
Q Consensus 445 ~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~g~~ 523 (561)
...+..+.++.++|.+.|....+.+ ...|..
T Consensus 810 ------------------------------------------------~~~g~~~~dIakrL~d~G~hapt~~~pv~g~l 841 (939)
T TIGR00461 810 ------------------------------------------------AKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTL 841 (939)
T ss_pred ------------------------------------------------hhcCCCHHHHHHHHHhCCeeccccCCccCCeE
Confidence 0112346789999999997665533 234566
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 524 FLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 524 ~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
.+|.+ -.++++|||++++++.++.+++.+
T Consensus 842 miepT---E~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 842 MVEPT---ESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred EEEee---ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 77765 366889999999999999888765
No 20
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.96 E-value=1.9e-26 Score=260.90 Aligned_cols=381 Identities=13% Similarity=0.077 Sum_probs=251.0
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccCh-----hhHHHHHHHHHHHHHh
Q psy9807 67 DTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASP-----ACTELEVVMLDWLGKM 141 (561)
Q Consensus 67 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp-----~~~~lE~~~~~~la~l 141 (561)
.+-.+++..+.+.-..+.....+..++|... ....|. +++....++.....+...| ...+++.++.+|++++
T Consensus 478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct-~~~~p~--~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~el 554 (954)
T PRK05367 478 HSETEMMRYLRRLEDKDLALDRSMIPLGSCT-MKLNAA--AEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEI 554 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccceeeCCcCC-CcCCHH--HHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 3777899988886555544344556677732 222222 2333333443333344455 4789999999999999
Q ss_pred cCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeE
Q psy9807 142 LDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKML 220 (561)
Q Consensus 142 ~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~ 220 (561)
+|++. ..+..++|+++|+.+++++|.....+ +. .-...+++..+. .|..+++.+.|.+++
T Consensus 555 tG~d~----------~sl~~~~ga~ge~agL~a~r~~~~~~----G~-----~~r~~vlis~~aH~snp~sa~~~G~~vv 615 (954)
T PRK05367 555 TGYDA----------VSLQPNAGAQGEYAGLLAIRAYHESR----GE-----GHRDVCLIPSSAHGTNPASAVMAGMKVV 615 (954)
T ss_pred HCCCC----------EEECccHHHHHHHHHHHHHHHHhhcc----CC-----CCCCEEEEEchhhhhhHHHHHHCCCEEE
Confidence 99973 23456678899999998877542211 10 001123333333 788888888999999
Q ss_pred EeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCcccc
Q psy9807 221 DLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENR 299 (561)
Q Consensus 221 ~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~ 299 (561)
.+|+ .+|.+|+++|++++++ . +..+.+|+++.++|..+..+|+++|+++||++|+|+|||||++++.+....
T Consensus 616 ~v~~d~~G~iD~~~L~~~i~~--~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~-- 688 (954)
T PRK05367 616 VVACDENGNIDLDDLRAKAEE--H---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLAR-- 688 (954)
T ss_pred EECCCCCCCcCHHHHHHHHhc--c---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCC--
Confidence 9999 7899999999999976 2 225788899999988444589999999999999999999999755332211
Q ss_pred ccccCccccceeeecCCccccccccce-----eEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc----c
Q psy9807 300 YLMKGVELADSFNFNPHKWMLVTFDCS-----AMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF----R 370 (561)
Q Consensus 300 ~~~~gi~~aDsi~~~~HK~l~~P~g~g-----~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~----~ 370 (561)
.+...||++++++||||+.|.|+| ++++++. +. +|+.....+...+....+...+.++ .
T Consensus 689 ---pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~-------p~lpg~~v~~~~~~~~~g~v~ta~~g~al~ 756 (954)
T PRK05367 689 ---PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LA-------PFLPGHPVQIAGGETGIGAVSAAPFGSASI 756 (954)
T ss_pred ---hhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc--cc-------ccCCCCccCcCCCCCCcCcchhHHHHHHHH
Confidence 123357999999999999998855 8998742 21 2222111000000000111122222 3
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc----ccccceeeecccCccccccccchhhHHHHHH
Q psy9807 371 SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE----VLMGLVCFRLKHWQIPLGRRFRSLKLWFVLR 446 (561)
Q Consensus 371 al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~ 446 (561)
++..|+.++.+|.+|++++.++.+.+|+|++++|++. +++... +...-++|++++..
T Consensus 757 ~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~----------------- 817 (954)
T PRK05367 757 LPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLK----------------- 817 (954)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeeccc-----------------
Confidence 4567999999999999999999999999999999874 444321 11222333332110
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEE
Q psy9807 447 LLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLR 526 (561)
Q Consensus 447 ~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR 526 (561)
...+..+.++.++|.+.|....+.. +.....+|
T Consensus 818 ----------------------------------------------~~~g~~~~di~krL~d~G~~~~t~~-~pv~~~l~ 850 (954)
T PRK05367 818 ----------------------------------------------ESTGITVDDIAKRLIDYGFHAPTMS-FPVAGTLM 850 (954)
T ss_pred ----------------------------------------------ccCCCCHHHHHHHHHHCCCeEeecC-CccCCEEE
Confidence 0011224689999999887655422 22345688
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 527 MAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 527 ~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
++++ ..++++|+|+++++++.+..++.+
T Consensus 851 i~pt-E~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 851 VEPT-ESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred EEee-ecCCHHHHHHHHHHHHHHHHHHHH
Confidence 8866 477889999999999999888765
No 21
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=1.2e-25 Score=237.62 Aligned_cols=351 Identities=14% Similarity=0.046 Sum_probs=237.2
Q ss_pred ccccccCCCCCChHHHHHHHHHhhc-----cccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCCh
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDSI-----ACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTA 164 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~gg 164 (561)
..||++..+++.+..++..+ ...+ |.....+..+....+..+++++.+++++|.++. ...+||+|+
T Consensus 20 ~~yld~a~~~~~~~~v~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--------~~i~~~~~~ 90 (401)
T PRK10874 20 GVYLDSAATALKPQAVIEAT-QQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA--------KNIVWTRGT 90 (401)
T ss_pred eEEEeCCcccCCCHHHHHHH-HHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC--------CEEEEECCH
Confidence 46999998887776665433 3333 222234445566778888999999999999321 267899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c----hHHHHHHhccCCeEEeeC-CCCccChhhHHHHH
Q psy9807 165 SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T----ELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVI 238 (561)
Q Consensus 165 T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~----s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i 238 (561)
|+++..++.+...... . .++++++...+ . .+.+.++..|.+++.+|. .++.+|++++++.|
T Consensus 91 t~~i~~~~~~~~~~~~----------~---~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i 157 (401)
T PRK10874 91 TESINLVAQSYARPRL----------Q---PGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELI 157 (401)
T ss_pred HHHHHHHHHHhhhccC----------C---CcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhc
Confidence 9987655543211000 0 02345554444 2 355666778899999999 77899999999999
Q ss_pred hhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcc
Q psy9807 239 QRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKW 318 (561)
Q Consensus 239 ~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~ 318 (561)
.+ .+.+|++++.++.||.+.|+++|+++|+++|++++||++|+.+....+ +..+ .+|++++++||+
T Consensus 158 ~~--------~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~ 223 (401)
T PRK10874 158 TP--------RTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPAD-----VQAL-DIDFYAFSGHKL 223 (401)
T ss_pred Cc--------CcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCC-----chhc-CCCEEEEecccc
Confidence 66 567899999999999999999999999999999999999975433221 1111 369999999995
Q ss_pred ccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCC-------Cccccc-CcCC-cchHHHHHHHHHhhHHHHHHH
Q psy9807 319 MLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDY-------RHWQIP-LGRR-FRSLKLWFVLRLLGVKYLQEY 389 (561)
Q Consensus 319 l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~-------~~~~~~-~sr~-~~al~lw~~l~~~g~~g~~~~ 389 (561)
++|.|+|++++++. .+.. + .++..........++ ..+.++ ++.. ...+.+..+++.+...|+.++
T Consensus 224 -~gp~G~G~l~~~~~-~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~ 297 (401)
T PRK10874 224 -YGPTGIGVLYGKSE-LLEA-M---SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQA 297 (401)
T ss_pred -cCCCccEEEEEchH-HHhc-C---CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHH
Confidence 56889999998653 2322 1 112110000000000 001111 1222 245677788888888888888
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q psy9807 390 IRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQ 469 (561)
Q Consensus 390 ~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~ 469 (561)
.++..++++++.+.|+++|+++++.++..++++|++.+
T Consensus 298 ~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~------------------------------------------ 335 (401)
T PRK10874 298 ESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAG------------------------------------------ 335 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECC------------------------------------------
Confidence 99999999999999999999998876666776664322
Q ss_pred HhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE--------CCEEEEEEEecCCCCCHHHHHH
Q psy9807 470 LVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI--------RDVYFLRMAVCSRYSESSDMIY 541 (561)
Q Consensus 470 ~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--------~g~~~lR~~~~~~~t~~~di~~ 541 (561)
.+ ..++.+.|.+.|.++..+... ...+++|+|++. ++|++||++
T Consensus 336 -------------------------~~--~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~-~nt~edid~ 387 (401)
T PRK10874 336 -------------------------VH--HSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAP-YNTQSDVDA 387 (401)
T ss_pred -------------------------cC--HHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecc-cCCHHHHHH
Confidence 11 246677777777655443321 123589999775 568899999
Q ss_pred HHHHHHHHHHH
Q psy9807 542 SWNEIKTLTEE 552 (561)
Q Consensus 542 l~~~l~~~~~~ 552 (561)
++++|+++.+.
T Consensus 388 ll~al~~~~~~ 398 (401)
T PRK10874 388 LVNAVDRALEL 398 (401)
T ss_pred HHHHHHHHHHH
Confidence 99999987764
No 22
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=8.1e-26 Score=236.75 Aligned_cols=311 Identities=13% Similarity=0.101 Sum_probs=210.8
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
......++.+++++++|.++. ...+||+|+|+++..++.+. ... ++.+++....
T Consensus 42 ~~~~~~~~~~~la~~~~~~~~--------~~v~~~~g~t~al~~~~~~~----~~~-------------gd~vl~~~~~~ 96 (376)
T TIGR01977 42 ASREVEETRQLLAKLFNAPSS--------AHVVFTNNATTALNIALKGL----LKE-------------GDHVITTPMEH 96 (376)
T ss_pred HHHHHHHHHHHHHHHhCcCCC--------CeEEEeCCHHHHHHHHHHhc----cCC-------------CCEEEECcchh
Confidence 346677788899999998642 25789999999987665441 100 1244443333
Q ss_pred chH----HHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCc
Q psy9807 206 TEL----EVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDV 280 (561)
Q Consensus 206 ~s~----~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~ 280 (561)
.++ ...+...|.+++.++. .++.+|+++|++.+.+ .+.+|++++.++.||.+.|+++|.++|+++|+
T Consensus 97 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~--------~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~ 168 (376)
T TIGR01977 97 NSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKT--------NTKLIVVSHASNVTGTILPIEEIGELAQENGI 168 (376)
T ss_pred hHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCC--------CCeEEEEECCCCCccccCCHHHHHHHHHHcCC
Confidence 333 3445556889999998 7788999999999866 57788999999999999999999999999999
Q ss_pred eEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCc
Q psy9807 281 WLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRH 360 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (561)
+++||+||+.+....+- . ...+|++++++|||+++|.|+|++++++...+.........+-.... .......
T Consensus 169 ~livD~a~~~g~~~~~~-----~-~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 240 (376)
T TIGR01977 169 FFILDAAQTAGVIPIDM-----T-ELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSALI--DQPSELP 240 (376)
T ss_pred EEEEEhhhccCccCCCc-----h-hcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCccccccc--cccccch
Confidence 99999999876543221 0 12469999999999999999999999876532221111000000000 0000000
Q ss_pred cccc-CcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc----cccceeeecccCcccccc
Q psy9807 361 WQIP-LGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV----LMGLVCFRLKHWQIPLGR 434 (561)
Q Consensus 361 ~~~~-~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~----~~~~v~f~~~~~~~~~~~ 434 (561)
..++ .+.. .....++.+++.+...|++++.++..++++++.+.|++.++++++.+. ..++++|
T Consensus 241 ~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~----------- 309 (376)
T TIGR01977 241 DRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSF----------- 309 (376)
T ss_pred hhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEE-----------
Confidence 0001 1111 224667788888888999999999999999999999999999988642 2344444
Q ss_pred ccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEE
Q psy9807 435 RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHL 514 (561)
Q Consensus 435 ~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~ 514 (561)
...+.+ ..++.+.|.+...+.+
T Consensus 310 --------------------------------------------------------~~~~~~--~~~~~~~L~~~~gi~v 331 (376)
T TIGR01977 310 --------------------------------------------------------TVEGID--SEEVADILDEKFDIAT 331 (376)
T ss_pred --------------------------------------------------------EECCCC--HHHHHHHHhccCCEEE
Confidence 332221 3467788877623443
Q ss_pred Eeee-----------ECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9807 515 VPSK-----------IRDVYFLRMAVCSRYSESSDMIYSWNEIKT 548 (561)
Q Consensus 515 ~~~~-----------~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 548 (561)
.... ......+|++++ .++|++||++++++|++
T Consensus 332 ~~g~~~~~~~~~~~g~~~~~~iRis~~-~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 332 RTGLHCAPLAHKTIGTFATGTIRLSLG-YFNTEEEIEKLLEALSE 375 (376)
T ss_pred EcccccchHHHHHhCCCCCCeEEEecC-CCCCHHHHHHHHHHHhh
Confidence 3211 113458999955 67799999999999975
No 23
>PLN02651 cysteine desulfurase
Probab=99.95 E-value=5.6e-26 Score=236.85 Aligned_cols=285 Identities=15% Similarity=0.072 Sum_probs=196.1
Q ss_pred ccccCCCCCChHHHHHHHHHhhc----cccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDSI----ACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 167 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~a 167 (561)
||++..+++.++.++..+..... |+....+..++.+.++.+++.+.+++++|.+++ ..+||+|+|++
T Consensus 2 Yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---------~v~~t~~~t~a 72 (364)
T PLN02651 2 YLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK---------EIIFTSGATES 72 (364)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEeCCHHHH
Confidence 67777777766666554433322 222223444566778888999999999998754 67999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHH---HhccCCeEEeeC-CCCccChhhHHHHHhhhc
Q psy9807 168 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVM---LDWLGKMLDLPK-EFLACSGGKGGGVIQRKS 242 (561)
Q Consensus 168 nl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa---~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~ 242 (561)
+..++..+......+ ++++++...+ .++.... ...|.+++.+|. +++.+|+++|+++|.+
T Consensus 73 ~~~~l~~~~~~~~~~-------------g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-- 137 (364)
T PLN02651 73 NNLAIKGVMHFYKDK-------------KKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRP-- 137 (364)
T ss_pred HHHHHHHHHHhccCC-------------CCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC--
Confidence 988887764432110 1234443333 4544433 245788999998 7889999999999976
Q ss_pred hhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc
Q psy9807 243 DREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT 322 (561)
Q Consensus 243 ~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P 322 (561)
.+.+|++++.++.||.+.|+++|+++||+||+++|||++|+.+.+..+ ++.+ .+|++++++||| ++|
T Consensus 138 ------~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~-----~~~~-~~D~~~~s~hK~-~gp 204 (364)
T PLN02651 138 ------DTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVD-----VDDL-GVDLMSISGHKI-YGP 204 (364)
T ss_pred ------CcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccC-----cccC-CCCEEEechhhh-CCC
Confidence 467889999999999999999999999999999999999997655432 1111 359999999998 689
Q ss_pred ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy9807 323 FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFE 401 (561)
Q Consensus 323 ~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~ 401 (561)
.|+|+++++++... ...+.+.. ++... .+ ..++... ..+.+..+++.+.. +.+++.++..++++++.
T Consensus 205 ~G~g~l~v~~~~~~----~l~p~~~g----~~~~~--~~-~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~ 272 (364)
T PLN02651 205 KGVGALYVRRRPRV----RLEPLMSG----GGQER--GR-RSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLL 272 (364)
T ss_pred CceEEEEEcCCCCC----CCCccccC----CCccC--Cc-cCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 99999999875221 11111111 00000 00 0122222 34566677777764 45888899999999999
Q ss_pred HHHhc-CCCeEEeccc--c---ccceeeec
Q psy9807 402 QLVRS-DDRFEVIYEV--L---MGLVCFRL 425 (561)
Q Consensus 402 ~~l~~-~~g~~l~~~~--~---~~~v~f~~ 425 (561)
+.|++ +|+++++.+. . .++++|.+
T Consensus 273 ~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~ 302 (364)
T PLN02651 273 NGLRAKLGGVRVNGPRDPEKRYPGTLNLSF 302 (364)
T ss_pred HHHHhhCCCEEEECCCCcccCcCCEEEEEe
Confidence 99986 6899998752 1 24656544
No 24
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=1.3e-25 Score=237.59 Aligned_cols=351 Identities=11% Similarity=0.021 Sum_probs=234.6
Q ss_pred ccccccCCCCCChHHHHHHHHHhh----ccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDS----IACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 165 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~----~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT 165 (561)
--||++-.+++.+..++..+.... .|...+.+..++.+.+..+++++.+++++|.++. ...+||+|+|
T Consensus 24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~--------~~v~~t~g~t 95 (406)
T PRK09295 24 LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA--------EELVFVRGTT 95 (406)
T ss_pred eEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC--------CeEEEeCCHH
Confidence 369999988887777654432221 1333445556777788888899999999998421 2679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-----chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHh
Q psy9807 166 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-----TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQ 239 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-----~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~ 239 (561)
+++..++.+....... + ++++++...+ ..+...++..|++++.+|. .++.+|+++|++++.
T Consensus 96 ~~l~~~~~~~~~~~~~------~-------gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~ 162 (406)
T PRK09295 96 EGINLVANSWGNSNVR------A-------GDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD 162 (406)
T ss_pred HHHHHHHHHhhhhcCC------C-------cCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC
Confidence 9976555432111110 0 2345555443 2345566778899999998 788899999999986
Q ss_pred hhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccc
Q psy9807 240 RKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWM 319 (561)
Q Consensus 240 ~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l 319 (561)
+ ++.+|++++.++.||.+.|+++|+++|+++|++++||++|+.+....+ +.. ..+|++++++|| +
T Consensus 163 ~--------~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~-----~~~-~~~D~~~~s~~K-~ 227 (406)
T PRK09295 163 E--------RTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVD-----VQA-LDCDFYVFSGHK-L 227 (406)
T ss_pred C--------CcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccC-----chh-cCCCEEEeehhh-c
Confidence 6 577899999999999999999999999999999999999976543221 111 135999999999 5
Q ss_pred cccccceeEEecChhhHHHhhccCCCccccCCC------CCCCCCC--ccccc-CcCC-cchHHHHHHHHHhhHHHHHHH
Q psy9807 320 LVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQ------GSAPDYR--HWQIP-LGRR-FRSLKLWFVLRLLGVKYLQEY 389 (561)
Q Consensus 320 ~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~------~~~~~~~--~~~~~-~sr~-~~al~lw~~l~~~g~~g~~~~ 389 (561)
++|.|+|++++++. .+.. + +++...... .....+. ...++ ++.. ...+.++.+++.+...|++++
T Consensus 228 ~gp~G~G~l~~~~~-~~~~-~---~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i 302 (406)
T PRK09295 228 YGPTGIGILYVKEA-LLQE-M---PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNI 302 (406)
T ss_pred cCCCCcEEEEEchH-hHhh-C---CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHH
Confidence 56899999999764 2221 1 122111000 0000000 00111 1222 134677888888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEeccc-cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q psy9807 390 IRKQISLAKEFEQLVRSDDRFEVIYEV-LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFE 468 (561)
Q Consensus 390 ~~~~~~la~~l~~~l~~~~g~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~ 468 (561)
.++..++++++.+.|+++++++++.+. ..++++|.+.+
T Consensus 303 ~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~----------------------------------------- 341 (406)
T PRK09295 303 AEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGK----------------------------------------- 341 (406)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECC-----------------------------------------
Confidence 999999999999999999999988652 34565554321
Q ss_pred HHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeee--------ECCEEEEEEEecCCCCCHHHHH
Q psy9807 469 QLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSK--------IRDVYFLRMAVCSRYSESSDMI 540 (561)
Q Consensus 469 ~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~--------~~g~~~lR~~~~~~~t~~~di~ 540 (561)
.. ..++.+.|.+.|+...++.. .....++|+|+. +++|++|||
T Consensus 342 --------------------------~~--~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~-~ynt~~did 392 (406)
T PRK09295 342 --------------------------HH--AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVD 392 (406)
T ss_pred --------------------------cC--HHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEcc-CCCCHHHHH
Confidence 11 23456666666543322210 011247999955 778999999
Q ss_pred HHHHHHHHHHH
Q psy9807 541 YSWNEIKTLTE 551 (561)
Q Consensus 541 ~l~~~l~~~~~ 551 (561)
+++++|+++..
T Consensus 393 ~l~~~l~~i~~ 403 (406)
T PRK09295 393 RLVAGLQRIHR 403 (406)
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 25
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.95 E-value=3.1e-25 Score=238.18 Aligned_cols=387 Identities=15% Similarity=0.089 Sum_probs=246.5
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCC-ChHHHHHHHHHh-hcccccccc---ccChhhHHHHHHHH
Q psy9807 61 TAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTAN-SYPAIVADILSD-SIACIGFTW---IASPACTELEVVML 135 (561)
Q Consensus 61 ~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~l~~-~~n~~~~~~---~~sp~~~~lE~~~~ 135 (561)
.+|+ .+-.++++.+.+.-..+... ...|.|.-.+.. .++.+...++.. .+. +-..| ..+....++..++.
T Consensus 45 ~~~~--~se~~~~~~~~~l~~~n~~~--~~~~~g~G~~~~~~~p~i~~~~~~~~~~~-~~tpYq~e~~sqG~lel~~~~~ 119 (481)
T PRK04366 45 ELPE--VSELEVVRHYTRLSQKNYGV--DTGFYPLGSCTMKYNPKINEKVARLPGFA-ELHPLQPEETVQGALELMYELQ 119 (481)
T ss_pred CCCC--CCHHHHHHHHHHHHhcCCCC--CcceecCcccCCCCCHHHHHHHHhCcchh-cCCCCCChhhhhHHHHHHHHHH
Confidence 4566 78889999988865444321 125665553333 344444444443 132 33334 35666778999999
Q ss_pred HHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHh
Q psy9807 136 DWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLD 214 (561)
Q Consensus 136 ~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~ 214 (561)
+|+++++|++. ..++.++|+.+++.++.++|.....+ +. ....++++.... .+....+..
T Consensus 120 ~~la~l~G~~~----------~~l~~~~GA~a~~~~l~~~r~~~~~~----Gd-----~~~~~Vlv~~~~hp~~~~~~~~ 180 (481)
T PRK04366 120 EWLKEITGMDA----------VTLQPAAGAHGELTGLLMIRAYHEAR----GD-----TKRTEVIVPDSAHGTNPASAAM 180 (481)
T ss_pred HHHHHHhCCCc----------eEEEeCcHHHHHHHHHHHHHHHhhcc----Cc-----CCCCEEEEcCCccHhHHHHHHH
Confidence 99999999974 34677788888887776655432211 00 001244444444 666677788
Q ss_pred ccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc-cCHHHHHHHHhhcCceEEechhccccc
Q psy9807 215 WLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF-DCLEEIGQVCRQKDVWLHVDAAYAGSA 292 (561)
Q Consensus 215 ~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i-dpl~eI~~ia~~~~~~lhVDaA~gg~~ 292 (561)
.|.+++.+|. .++.+|+++|++++.+ .+.+|+++..+ .+|.+ +|+++|+++|+++|+|+|||+|+..+.
T Consensus 181 ~G~~vv~v~~~~~~~~D~e~L~~~i~~--------~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~ 251 (481)
T PRK04366 181 AGFKVVEIPSNEDGLVDLEALKAAVGE--------DTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAI 251 (481)
T ss_pred cCCEEEEeecCCCCCcCHHHHHhhccc--------CCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhh
Confidence 8999999999 7899999999999976 45567777655 78988 699999999999999999999986442
Q ss_pred ccCccccccccCccccceeeecCCccccccccce-----eEEecChhhHHHhhccCCCccccCC-CCCCCCC-CcccccC
Q psy9807 293 FICPENRYLMKGVELADSFNFNPHKWMLVTFDCS-----AMWLKDPSWVVNAFNVDPLYLKHDQ-QGSAPDY-RHWQIPL 365 (561)
Q Consensus 293 ~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g-----~l~~r~~~~l~~~~~~~~~yl~~~~-~~~~~~~-~~~~~~~ 365 (561)
+.. .. .+...+|++++++||||++|.|+| ++++++. ..+ .+ ++.+.... .+....+ +...+..
T Consensus 252 ~g~--~~---~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~~-~l---p~~~v~~~g~~~~l~~~r~~~i~r 321 (481)
T PRK04366 252 LGK--AR---PGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-LAP-FL---PVPVVEKDGDRYRLDYDRPKSIGR 321 (481)
T ss_pred ccc--CC---ccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-hHh-hC---CCCeeeccCCceeecccccccCCC
Confidence 211 11 112246999999999999997664 7888764 222 12 11111100 0000000 1111111
Q ss_pred cCCcc-----hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-ccccceeeecccCccccccccchh
Q psy9807 366 GRRFR-----SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCFRLKHWQIPLGRRFRSL 439 (561)
Q Consensus 366 sr~~~-----al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~ 439 (561)
.+.+. +++.|..+..+|.+|++++.++++.+++||+++|+++ +++..+ +....++|+..
T Consensus 322 ~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~------------- 386 (481)
T PRK04366 322 VRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGK------------- 386 (481)
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECc-------------
Confidence 22222 4788999999999999999999999999999999986 444322 11222222110
Q ss_pred hHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE
Q psy9807 440 KLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI 519 (561)
Q Consensus 440 k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 519 (561)
.|... +....++.++|.+.|........+
T Consensus 387 -------------------------------------------------~~~~~--g~~~~~v~~~L~~~Gi~~~~~~~p 415 (481)
T PRK04366 387 -------------------------------------------------KLKET--GVRTLDIAKRLLDYGFHPPTIYFP 415 (481)
T ss_pred -------------------------------------------------ccccc--CCCHHHHHHHHHHCCccCCccccc
Confidence 01111 112467889999988654311111
Q ss_pred -CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9807 520 -RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKEE 557 (561)
Q Consensus 520 -~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~~ 557 (561)
....++|++++ ..+|++|||+++++|+++.+++.++.
T Consensus 416 ~~~~~~l~is~~-e~~t~edid~l~~~l~~i~~~~~~~~ 453 (481)
T PRK04366 416 LIVPEALMIEPT-ETESKETLDAFIAAMKQIAEEAKENP 453 (481)
T ss_pred cccCCeEEEccc-CCCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 11347999966 57789999999999999988876654
No 26
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=2.3e-25 Score=235.50 Aligned_cols=351 Identities=11% Similarity=0.049 Sum_probs=231.6
Q ss_pred cccccCCCCCChHHHHHHHHHhhc-----cccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh
Q psy9807 91 KFHAYFPTANSYPAIVADILSDSI-----ACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 165 (561)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT 165 (561)
.||++-..++.+..++ +.+...+ |.+...+..++...+..+++++.+++++|.++. ...+||+|+|
T Consensus 20 ~yld~~~~~~~p~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~--------~~v~~~~g~t 90 (403)
T TIGR01979 20 VYLDSAATSQKPQQVI-DAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD--------EEIVFTRGTT 90 (403)
T ss_pred EEEeCccccCCCHHHH-HHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC--------CeEEEeCCHH
Confidence 5888887776665554 3333332 333334445566677778899999999999732 2679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-----chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHh
Q psy9807 166 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-----TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQ 239 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-----~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~ 239 (561)
+++..++.+....... .++.+++...+ +.+.+.+...|.+++.+|+ +++.+|+++|++.+.
T Consensus 91 ~~l~~~~~~~~~~~~~-------------~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~ 157 (403)
T TIGR01979 91 ESINLVAYSWGDSNLK-------------AGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT 157 (403)
T ss_pred HHHHHHHHHhhhhcCC-------------CCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc
Confidence 9965555443211100 02344444443 2345566677899999999 788999999999997
Q ss_pred hhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccc
Q psy9807 240 RKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWM 319 (561)
Q Consensus 240 ~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l 319 (561)
+ ++.+|+.++.++.+|.+.|+++|+++|++||+++|||+||+.+....+ +... .+|+++.++||++
T Consensus 158 ~--------~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~~ 223 (403)
T TIGR01979 158 E--------KTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVD-----VQAL-DCDFYVFSGHKMY 223 (403)
T ss_pred c--------CCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccC-----cccc-CCCEEEEeccccc
Confidence 6 577899999999999999999999999999999999999986543221 1111 3599999999976
Q ss_pred cccccceeEEecChhhHHHhhccCCCccccCCCCCC-----CCCC--ccccc-CcCCc-chHHHHHHHHHhhHHHHHHHH
Q psy9807 320 LVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSA-----PDYR--HWQIP-LGRRF-RSLKLWFVLRLLGVKYLQEYI 390 (561)
Q Consensus 320 ~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~-----~~~~--~~~~~-~sr~~-~al~lw~~l~~~g~~g~~~~~ 390 (561)
+|.|+|++++++. .+.. +. +|......... ..+. .+.++ ++... ..+.++.+++.+...|++++.
T Consensus 224 -gp~G~g~l~~~~~-~~~~-~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~ 297 (403)
T TIGR01979 224 -GPTGIGVLYGKEE-LLEQ-MP---PFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIE 297 (403)
T ss_pred -CCCCceEEEEchH-HHhc-CC---CeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHH
Confidence 5889999998753 2221 11 11110000000 0000 01111 11221 246677888888777889999
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEeccc----cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHH
Q psy9807 391 RKQISLAKEFEQLVRSDDRFEVIYEV----LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKE 466 (561)
Q Consensus 391 ~~~~~la~~l~~~l~~~~g~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~ 466 (561)
++..++++++.+.|+++++++++.++ ..++++|++.+
T Consensus 298 ~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~--------------------------------------- 338 (403)
T TIGR01979 298 AHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEG--------------------------------------- 338 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCC---------------------------------------
Confidence 99999999999999999999998653 24565554321
Q ss_pred HHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee--------eECCEEEEEEEecCCCCCHHH
Q psy9807 467 FEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS--------KIRDVYFLRMAVCSRYSESSD 538 (561)
Q Consensus 467 ~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~--------~~~g~~~lR~~~~~~~t~~~d 538 (561)
.+ ..++.+.|.+.|.....+. ......++|+|+. ++++++|
T Consensus 339 ----------------------------~~--~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~-~~~t~~d 387 (403)
T TIGR01979 339 ----------------------------VH--PHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFY-IYNTEED 387 (403)
T ss_pred ----------------------------cC--HHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEec-cCCCHHH
Confidence 11 2356667766664332211 0111358999966 6779999
Q ss_pred HHHHHHHHHHHHHHH
Q psy9807 539 MIYSWNEIKTLTEEL 553 (561)
Q Consensus 539 i~~l~~~l~~~~~~~ 553 (561)
|++++++|+++.+.+
T Consensus 388 i~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 388 IDALVEALKKVRKFF 402 (403)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999876653
No 27
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.95 E-value=2.2e-25 Score=233.66 Aligned_cols=273 Identities=14% Similarity=0.079 Sum_probs=183.7
Q ss_pred ccccCCCCCChHHHHHHHHHhh---ccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDS---IACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEAT 168 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~---~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~an 168 (561)
||++-.+++.++.++..+.... ..+....+..++.+.++.+++++++++++|.+++ ..+||+|||+++
T Consensus 2 yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---------~i~~t~~~t~a~ 72 (379)
T TIGR03402 2 YLDNNATTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD---------EIIFTSGGTESD 72 (379)
T ss_pred cCCCcCCCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEeCcHHHHH
Confidence 7888877777776654333221 1111122334566778888999999999998754 689999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH---HHhccCCeEEeeC-CCCccChhhHHHHHhhhch
Q psy9807 169 LVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV---MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSD 243 (561)
Q Consensus 169 l~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka---a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~ 243 (561)
..++.+..... + + .+.+++...+ .++... +...|.+++.+|. .++.+|++++++.|.+
T Consensus 73 ~~al~~~~~~~-~----~---------~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~--- 135 (379)
T TIGR03402 73 NTAIKSALAAQ-P----E---------KRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITD--- 135 (379)
T ss_pred HHHHHHHHHhc-C----C---------CCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCC---
Confidence 88887653211 0 0 1233333333 444333 2335889999998 7789999999999976
Q ss_pred hhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc
Q psy9807 244 REMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF 323 (561)
Q Consensus 244 ~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~ 323 (561)
.+.+|+++..++.+|.+.|+++|+++|++||+++|||++|+.+....+ +.. ..+|++++++|| +++|.
T Consensus 136 -----~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~-----~~~-~~~D~~~~s~~K-~~gp~ 203 (379)
T TIGR03402 136 -----DTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPID-----LKE-MNIDMLSLSGHK-LHGPK 203 (379)
T ss_pred -----CcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccC-----ccc-CCCCEEEEcHHH-cCCCC
Confidence 467888899999999999999999999999999999999986543222 111 145999999999 67899
Q ss_pred cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy9807 324 DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQ 402 (561)
Q Consensus 324 g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~ 402 (561)
|+|++++++...+ .+ ++... ..... .. .++..+ ..+.+..+++.+ .++++++.++..++.+++.+
T Consensus 204 G~g~l~v~~~~~~------~p-~~~g~---~~~~~--~~-~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~ 269 (379)
T TIGR03402 204 GVGALYIRKGTRF------RP-LLRGG---HQERG--RR-AGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEA 269 (379)
T ss_pred ceEEEEECCCCCC------CC-cccCC---ccCCC--cC-CCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHH
Confidence 9999999864211 11 11110 00000 00 111111 123344444443 44678888899999999999
Q ss_pred HHhc-CCCeEEeccc
Q psy9807 403 LVRS-DDRFEVIYEV 416 (561)
Q Consensus 403 ~l~~-~~g~~l~~~~ 416 (561)
.|++ +|++++..++
T Consensus 270 ~l~~~~~~~~~~~~~ 284 (379)
T TIGR03402 270 GLLARIPDARLNGDP 284 (379)
T ss_pred HHHhhCCCEEEeCCC
Confidence 9986 8999887643
No 28
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=2.4e-25 Score=234.98 Aligned_cols=351 Identities=13% Similarity=0.024 Sum_probs=234.2
Q ss_pred ccccccCCCCCChHHHHHHHHHhhc-----cccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCCh
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDSI-----ACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTA 164 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~gg 164 (561)
.-||++-.+++.+..++..+ ...+ |.....+..++...+...++++.+++++|.++. ...+||+|+
T Consensus 17 ~iyld~a~~~~~p~~v~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--------~~i~~t~g~ 87 (398)
T TIGR03392 17 TVYLDSAATALKPQAVIDAT-QQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDA--------ENIVWTRGT 87 (398)
T ss_pred eEEeeCccccCCCHHHHHHH-HHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC--------CeEEEeCCh
Confidence 36899988877666654433 3332 222234445566777888899999999998521 257899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch----HHHHHHhccCCeEEeeC-CCCccChhhHHHHH
Q psy9807 165 SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE----LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVI 238 (561)
Q Consensus 165 T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s----~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i 238 (561)
|+++..++.+...... .+ ++++++...+ .+ +...+...|.+++.+|. .++.+|+++|++++
T Consensus 88 t~~l~~~~~~~~~~~~------~~-------gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i 154 (398)
T TIGR03392 88 TESINLVAQSYARPRL------QP-------GDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELL 154 (398)
T ss_pred HHHHHHHHHHhhhccC------CC-------CCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHh
Confidence 9997666554311000 00 2244444434 33 44556778999999999 77889999999999
Q ss_pred hhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcc
Q psy9807 239 QRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKW 318 (561)
Q Consensus 239 ~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~ 318 (561)
.+ ++.+|++++.++.||.+.|+++|+++|++||++++||++|+.+.... .. ... .+|.+++++||+
T Consensus 155 ~~--------~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~-~~----~~~-~~d~~~~s~~K~ 220 (398)
T TIGR03392 155 TP--------RTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPP-DV----QAL-DIDFYAFSGHKL 220 (398)
T ss_pred cc--------CceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCC-Ch----hhc-CCCEEEEecccc
Confidence 76 56788889999999999999999999999999999999997543321 11 111 359999999995
Q ss_pred ccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCc-------cccc-CcCCc-chHHHHHHHHHhhHHHHHHH
Q psy9807 319 MLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRH-------WQIP-LGRRF-RSLKLWFVLRLLGVKYLQEY 389 (561)
Q Consensus 319 l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~-------~~~~-~sr~~-~al~lw~~l~~~g~~g~~~~ 389 (561)
++|.|+|++++++. .+.. + .++..........++.. ..++ ++..+ ..+.+..+++.+...|++++
T Consensus 221 -~gp~G~G~l~~~~~-~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i 294 (398)
T TIGR03392 221 -YGPTGIGVLYGKTE-LLEA-M---PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAA 294 (398)
T ss_pred -cCCCceEEEEEcHH-HHhh-C---CCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHH
Confidence 56889999998643 3322 1 11211100000000000 1111 12221 35677888888877888889
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q psy9807 390 IRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQ 469 (561)
Q Consensus 390 ~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~ 469 (561)
.++..++++++.+.|+++|+++++.++..++++|++.+
T Consensus 295 ~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~------------------------------------------ 332 (398)
T TIGR03392 295 EAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAG------------------------------------------ 332 (398)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCC------------------------------------------
Confidence 99999999999999999999998766556666654321
Q ss_pred HhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE--------CCEEEEEEEecCCCCCHHHHHH
Q psy9807 470 LVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI--------RDVYFLRMAVCSRYSESSDMIY 541 (561)
Q Consensus 470 ~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--------~g~~~lR~~~~~~~t~~~di~~ 541 (561)
.+ ..++.+.|.+.|.....+... ...+++|+|++ +++|++||++
T Consensus 333 -------------------------~~--~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~-~~~t~~ei~~ 384 (398)
T TIGR03392 333 -------------------------VH--HSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFA-PYNTQQDVDA 384 (398)
T ss_pred -------------------------cC--HHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEee-ccCCHHHHHH
Confidence 11 346777777776444332211 11358999977 4678899999
Q ss_pred HHHHHHHHHHH
Q psy9807 542 SWNEIKTLTEE 552 (561)
Q Consensus 542 l~~~l~~~~~~ 552 (561)
++++|+++.+.
T Consensus 385 l~~~l~~~~~~ 395 (398)
T TIGR03392 385 LVDAVGAALEL 395 (398)
T ss_pred HHHHHHHHHHH
Confidence 99999987664
No 29
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.95 E-value=4.9e-25 Score=230.59 Aligned_cols=294 Identities=12% Similarity=0.045 Sum_probs=196.8
Q ss_pred ccccCCCCCChHHHHHHHHHhh----ccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDS----IACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 167 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~----~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~a 167 (561)
||++-..++.++.++..+.... -|+..+.+..++...+...++.+++++++|.++. ...++|+|+|++
T Consensus 2 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--------~~v~~~~g~t~a 73 (373)
T cd06453 2 YLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSP--------DEIIFTRNTTEA 73 (373)
T ss_pred cccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC--------CeEEEeCCHHHH
Confidence 6777766666666554443321 2334456677788888999999999999998722 257899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch----HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhh
Q psy9807 168 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE----LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRK 241 (561)
Q Consensus 168 nl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s----~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~ 241 (561)
+..++.+..... .+ ++++++.... .+ +.+.++..|.+++.||. .++.+|+++|++.+.+
T Consensus 74 ~~~~~~~l~~~~-------~~-------g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~- 138 (373)
T cd06453 74 INLVAYGLGRAN-------KP-------GDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTE- 138 (373)
T ss_pred HHHHHHHhhhcC-------CC-------CCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcC-
Confidence 777666543210 00 1234433323 34 34445567889999999 7889999999999976
Q ss_pred chhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccc
Q psy9807 242 SDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV 321 (561)
Q Consensus 242 ~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~ 321 (561)
.+.+|+.++.++.+|.++|+++|+++|++||+|+|+|+|++.+....+ +.. ..+|++++++|||++.
T Consensus 139 -------~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~-----~~~-~~~d~~~~s~~K~~~~ 205 (373)
T cd06453 139 -------RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVD-----VQD-LGCDFLAFSGHKMLGP 205 (373)
T ss_pred -------CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeee-----ccc-cCCCEEEeccccccCC
Confidence 567888999999999999999999999999999999999985543221 111 1359999999999987
Q ss_pred cccceeEEecChhhHHHhhccCCCccccCC-CCCCCCCCc--cccc-CcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy9807 322 TFDCSAMWLKDPSWVVNAFNVDPLYLKHDQ-QGSAPDYRH--WQIP-LGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISL 396 (561)
Q Consensus 322 P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~-~~~~~~~~~--~~~~-~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~l 396 (561)
.++|++++++. .+.........+..... ......+.. .... .+.. ...+++|.+++.+...|++++.++..++
T Consensus 206 -~g~g~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~ 283 (373)
T cd06453 206 -TGIGVLYGKEE-LLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHEL 283 (373)
T ss_pred -CCcEEEEEchH-HhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 78898888653 33221111000000000 000000000 0011 1111 2357889999999988999999999999
Q ss_pred HHHHHHHHhcCCCeEEeccc--cccceee
Q psy9807 397 AKEFEQLVRSDDRFEVIYEV--LMGLVCF 423 (561)
Q Consensus 397 a~~l~~~l~~~~g~~l~~~~--~~~~v~f 423 (561)
++++.+.|+++|+++++.++ ..++++|
T Consensus 284 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 312 (373)
T cd06453 284 TAYALERLSEIPGVRVYGDAEDRAGVVSF 312 (373)
T ss_pred HHHHHHHHhcCCCeEEeCCccccCCeEEE
Confidence 99999999999999987432 2344444
No 30
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=9.9e-25 Score=228.11 Aligned_cols=285 Identities=14% Similarity=0.031 Sum_probs=196.9
Q ss_pred ccccCCCCCChHHHHHHHHHhh----ccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDS----IACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 167 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~----~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~a 167 (561)
||++-.+++.+..++..+.... .|.....+..+....++-+++.+.+++++|.+++ ...+|++|+|.+
T Consensus 2 Yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~--------~~v~~~~~~t~a 73 (371)
T PF00266_consen 2 YLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD--------EEVVFTSNGTEA 73 (371)
T ss_dssp EEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT--------EEEEEESSHHHH
T ss_pred EeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc--------cccccccccchh
Confidence 6667766777776655444332 2333345666777788889999999999999972 157899999998
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch----HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhh
Q psy9807 168 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE----LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRK 241 (561)
Q Consensus 168 nl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s----~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~ 241 (561)
+..++...+... . . ++++++...+ .+ +...++..|.+++.+|. .++.+|+++++++|.+
T Consensus 74 ~~~~~~~l~~~~-~----~---------g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~- 138 (371)
T PF00266_consen 74 LNAVASSLLNPL-K----P---------GDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNP- 138 (371)
T ss_dssp HHHHHHHHHHHG-T----T---------TCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHT-
T ss_pred hhhhhhcccccc-c----c---------ccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhcc-
Confidence 777666654321 0 0 2345555555 33 34445567889999999 8899999999999977
Q ss_pred chhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccc
Q psy9807 242 SDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV 321 (561)
Q Consensus 242 ~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~ 321 (561)
.+.+|+.++.++.+|.+.|+++|+++||++|++++||++++.+.+..+ ++.+ .+|++++++|| |++
T Consensus 139 -------~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id-----~~~~-~~D~~~~s~~K-l~g 204 (371)
T PF00266_consen 139 -------DTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPID-----LDEL-GADFLVFSSHK-LGG 204 (371)
T ss_dssp -------TESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS-------TTTT-TESEEEEESTS-TTS
T ss_pred -------ccceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccccc-----cccc-ccceeeecccc-cCC
Confidence 688999999999999999999999999999999999999997665443 1111 46999999999 888
Q ss_pred cccceeEEecChhhHHHhhccCCCc--cccCC-CCCCCCCCccccc-CcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy9807 322 TFDCSAMWLKDPSWVVNAFNVDPLY--LKHDQ-QGSAPDYRHWQIP-LGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISL 396 (561)
Q Consensus 322 P~g~g~l~~r~~~~l~~~~~~~~~y--l~~~~-~~~~~~~~~~~~~-~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~l 396 (561)
|.|+|++++++.. +.+.......+ ..... .........+.++ ++... ..+.+..+++.+...|++++.++..++
T Consensus 205 p~G~g~l~v~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l 283 (371)
T PF00266_consen 205 PPGLGFLYVRPEA-IERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIREL 283 (371)
T ss_dssp SSTEEEEEEEHHH-HHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhhheehhhh-hhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhH
Confidence 9999999998753 22221111111 10000 0000000001111 12221 235566788888888999999999999
Q ss_pred HHHHHHHHhcCCCeEEec
Q psy9807 397 AKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 397 a~~l~~~l~~~~g~~l~~ 414 (561)
++++.+.|+++++++++.
T Consensus 284 ~~~~~~~l~~~~~~~~~~ 301 (371)
T PF00266_consen 284 AEYLREALEELPGIEVLG 301 (371)
T ss_dssp HHHHHHHHHHTTTEEESS
T ss_pred HHHHHhhhhcCCceeEee
Confidence 999999999999998865
No 31
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.94 E-value=2.5e-25 Score=235.01 Aligned_cols=277 Identities=13% Similarity=0.104 Sum_probs=185.4
Q ss_pred ccccccCCCCCChHHHHHHHHHhh---c-cccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDS---I-ACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 165 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~---~-n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT 165 (561)
+.||++..+++.++.++..+.... + |.....+..+....+..+++++.+++++|.+++ ..+|++|+|
T Consensus 4 ~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---------~v~~~~g~t 74 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR---------EIVFTSGAT 74 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEeCCHH
Confidence 568998887777777654443322 1 222112222323456777888999999998754 679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHH---HhccCCeEEeeC-CCCccChhhHHHHHhh
Q psy9807 166 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVM---LDWLGKMLDLPK-EFLACSGGKGGGVIQR 240 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa---~~~g~~v~~v~~-~~g~~d~~~Le~~i~~ 240 (561)
+++..++.+....... + ++.+++...+ .++..++ ...|.+++.+|+ +++.+|+++|++.|.+
T Consensus 75 ~a~~~~l~~l~~~~~~------~-------g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~ 141 (402)
T TIGR02006 75 ESNNLAIKGIAHFYKS------K-------GNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRD 141 (402)
T ss_pred HHHHHHHHHHHHhhcC------C-------CCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC
Confidence 9998877654321110 0 1234444334 5555554 335889999998 7889999999999876
Q ss_pred hchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccc
Q psy9807 241 KSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWML 320 (561)
Q Consensus 241 ~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~ 320 (561)
.+.+|++++.++.+|.+.|+++|+++|+++|+|+|||+|++.+....+ +.+ ..+|++++++||++
T Consensus 142 --------~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~-----~~~-~~~D~~~~s~~K~~- 206 (402)
T TIGR02006 142 --------DTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPIN-----VNE-LKVDLMSISGHKIY- 206 (402)
T ss_pred --------CCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccC-----ccc-cCCCEEEEehhhhc-
Confidence 467888999999999999999999999999999999999987654322 111 14599999999965
Q ss_pred ccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy9807 321 VTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKE 399 (561)
Q Consensus 321 ~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~ 399 (561)
+|.|+|++++++..... ..+ .... ++.. ..+. .++.. ...+.+..+++.+- ++++++.++..+++++
T Consensus 207 gp~G~G~l~~~~~~~~~----~~~-~~~g---~~~~--~~~~-~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~ 274 (402)
T TIGR02006 207 GPKGIGALYVRRKPRVR----LEA-LIHG---GGHE--RGMR-SGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDR 274 (402)
T ss_pred CCCceEEEEEccCCCCC----CCc-eecC---CCcc--CCcc-CCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHH
Confidence 59999999998653221 111 1110 0000 0000 11111 12334445555543 4688888999999999
Q ss_pred HHHHHhcCCCeEEecc
Q psy9807 400 FEQLVRSDDRFEVIYE 415 (561)
Q Consensus 400 l~~~l~~~~g~~l~~~ 415 (561)
+.+.|+++|+++++.+
T Consensus 275 l~~~l~~~~~v~~~~~ 290 (402)
T TIGR02006 275 LLNGIKSIEEVYLNGD 290 (402)
T ss_pred HHHHHhcCCCEEEeCC
Confidence 9999999999888753
No 32
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.94 E-value=1.2e-24 Score=227.64 Aligned_cols=244 Identities=16% Similarity=0.121 Sum_probs=185.6
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh-HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS-EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT-~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
.|+....++++...++++.+|.++. ..++++++|| +++.+++.+++.+. ...+.|+
T Consensus 99 gss~~~~l~~~~e~~~~~~~G~~~~--------~~a~~v~~~Tg~al~laL~alr~~~---------------~~gd~VI 155 (444)
T TIGR03531 99 GSSLLYKLTNKLVKDFLKLLGLRSI--------KSAFVVPLATGMSLSLCLSALRHKR---------------PKAKYVI 155 (444)
T ss_pred CccHHHHHHHHHHHHHHHHcCCCCC--------CEEEEECCHHHHHHHHHHHHcCCcC---------------CCCCEEE
Confidence 4556778999999999999999843 2478999999 78888888765321 0124566
Q ss_pred eccc--chHHHHHHhccCCeEEeeC----CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 202 SPAC--TELEVVMLDWLGKMLDLPK----EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 202 ~~s~--~s~~kaa~~~g~~v~~v~~----~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+++. +|+.||+.+.|++++.+++ +++.||+++|+++|.+ .. ...+.+|+.+.+++..|..||+++|+++|
T Consensus 156 ~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~--~~--~kai~~Vv~Tp~t~~~g~~ddL~eIa~la 231 (444)
T TIGR03531 156 WPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEE--IG--PDNILCVLSTTSCFAPRSPDDIEEIAKIC 231 (444)
T ss_pred EECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHh--cc--CCCEEEEEEcCCcCCCcchhCHHHHHHHH
Confidence 6666 9999999999999999983 5689999999999975 21 12456666666666778999999999999
Q ss_pred hhcCceEEechhcccccccCccccccc-cCc--cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLM-KGV--ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQ 352 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~-~gi--~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 352 (561)
++||+|+|||+|||... +...+.. .+. +.+|++++++|||+.+|.++|++++++++....... .|...
T Consensus 232 ~k~gI~lIvDaAyg~~~---~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~---~y~g~--- 302 (444)
T TIGR03531 232 ANYDIPHIVNNAYGLQS---NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISK---SYPGR--- 302 (444)
T ss_pred HHcCCEEEEECcCcCcC---hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHH---hccCC---
Confidence 99999999999999532 2222222 233 257999999999999999999999988876643321 12110
Q ss_pred CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecc
Q psy9807 353 GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD---RFEVIYE 415 (561)
Q Consensus 353 ~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---g~~l~~~ 415 (561)
.....++.+|+++..+|.+++++++++..++++++.+.|+++. |..++..
T Consensus 303 -------------~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~ 355 (444)
T TIGR03531 303 -------------ASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDT 355 (444)
T ss_pred -------------CCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecC
Confidence 0113478899999999999999999999999999999998753 5566643
No 33
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.93 E-value=7.4e-24 Score=225.40 Aligned_cols=353 Identities=12% Similarity=0.023 Sum_probs=228.6
Q ss_pred ccccccCCCCCChHHHHHHHHHhh--c--cccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDS--I--ACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 165 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~--~--n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT 165 (561)
..||++-.+++.+..++..+.... + |.....+..+....+..+++++.+++++|.++. ...+||+|+|
T Consensus 33 ~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~--------~~v~~t~g~t 104 (424)
T PLN02855 33 LVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS--------REIVFTRNAT 104 (424)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC--------CEEEEeCCHH
Confidence 578999776666555554433322 1 222222333455566677889999999998532 2679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c----hHHHHHHhccCCeEEeeC-CCCccChhhHHHHHh
Q psy9807 166 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T----ELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQ 239 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~----s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~ 239 (561)
+++...+......... + ++++++...+ . .+...++..|.+++.+|. .++.+|+++|++.|.
T Consensus 105 ~al~~i~~~~~~~~~~------~-------gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~ 171 (424)
T PLN02855 105 EAINLVAYTWGLANLK------P-------GDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLS 171 (424)
T ss_pred HHHHHHHHHhhhhcCC------C-------cCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhc
Confidence 9975554321000000 0 1244444433 2 344455677899999998 677899999999996
Q ss_pred hhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccc
Q psy9807 240 RKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWM 319 (561)
Q Consensus 240 ~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l 319 (561)
+ ++.+|++++.++.||.+.|+++|+++|+++|++++||++|+.+....+ +... .+|++++++|| +
T Consensus 172 ~--------~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K-~ 236 (424)
T PLN02855 172 E--------KTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVD-----VQTL-GADFLVASSHK-M 236 (424)
T ss_pred c--------CceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCC-----chhc-CCCEEEeeccc-c
Confidence 6 577899999999999999999999999999999999999975433221 1111 35999999999 5
Q ss_pred cccccceeEEecChhhHHHhhccCCCccccCCC--C---CCCCCC--ccccc-CcCC-cchHHHHHHHHHhhHHHHHHHH
Q psy9807 320 LVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQ--G---SAPDYR--HWQIP-LGRR-FRSLKLWFVLRLLGVKYLQEYI 390 (561)
Q Consensus 320 ~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~--~---~~~~~~--~~~~~-~sr~-~~al~lw~~l~~~g~~g~~~~~ 390 (561)
++|.|+|++++++. .+.. + .++...... . ....+. ...++ ++.. ...+.++.+++.+...|++++.
T Consensus 237 ~gp~G~G~l~~~~~-~~~~-~---~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~ 311 (424)
T PLN02855 237 CGPTGIGFLWGKSD-LLES-M---PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIH 311 (424)
T ss_pred cCCCccEEEEEchh-hhhc-C---CCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 56999999999754 2221 1 122111000 0 000000 00011 1111 1245677788888788999999
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEecccc------ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHH
Q psy9807 391 RKQISLAKEFEQLVRSDDRFEVIYEVL------MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLA 464 (561)
Q Consensus 391 ~~~~~la~~l~~~l~~~~g~~l~~~~~------~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a 464 (561)
++..++++++++.|+++|+++++.+.. .++++|++
T Consensus 312 ~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~--------------------------------------- 352 (424)
T PLN02855 312 EYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNV--------------------------------------- 352 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEE---------------------------------------
Confidence 999999999999999999999986432 24544433
Q ss_pred HHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC-CcEEEEeee--------ECCEEEEEEEecCCCCC
Q psy9807 465 KEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN-GKIHLVPSK--------IRDVYFLRMAVCSRYSE 535 (561)
Q Consensus 465 ~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--------~~g~~~lR~~~~~~~t~ 535 (561)
++.+ ..++.+.|.++ |+...++.. ..-..++|+|+. +++|
T Consensus 353 ----------------------------~~~~--~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~-~ynt 401 (424)
T PLN02855 353 ----------------------------EGIH--PTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLY-FYNT 401 (424)
T ss_pred ----------------------------CCcC--HHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEec-cCCC
Confidence 2211 23567777666 433322210 011247999965 6789
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy9807 536 SSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 536 ~~di~~l~~~l~~~~~~~ 553 (561)
++||++++++|+++.+.+
T Consensus 402 ~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 402 KEEVDAFIHALKDTIAFF 419 (424)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988763
No 34
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.93 E-value=2.9e-23 Score=222.36 Aligned_cols=378 Identities=14% Similarity=0.049 Sum_probs=236.5
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHH------HHHHhhccccccccccC
Q psy9807 51 PGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVA------DILSDSIACIGFTWIAS 124 (561)
Q Consensus 51 ~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~------~~l~~~~n~~~~~~~~s 124 (561)
|.+++...+..+|+.+ +.+++++++.+....+.....|+.++|....+...|..+. +++.. +|+... +.+
T Consensus 32 p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~-y~~~~~--~~~ 107 (447)
T PRK00451 32 PEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTA-YTPYQP--EIS 107 (447)
T ss_pred CHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHh-cCCCCC--ccc
Confidence 4567777777899976 9999999999877555444457888874332222232222 22223 444322 235
Q ss_pred hhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc
Q psy9807 125 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA 204 (561)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s 204 (561)
+...+.+.+...|+++++|.+.+ .+++|+|||+++. ++..++... + ++++++...
T Consensus 108 ~g~~~~~~e~~~~la~l~g~~~~---------~v~~~~g~t~~~~-~~~~a~~~~--~-------------g~~Vlv~~~ 162 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTGMDVA---------NASMYDGATALAE-AALMAVRIT--K-------------RKKVLVSGA 162 (447)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcc---------eEEecCcHHHHHH-HHHHHHHhc--C-------------CCEEEEeCc
Confidence 55677777888899999999864 5789999997544 444333210 0 224555444
Q ss_pred c-chHHHHHHh----ccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 205 C-TELEVVMLD----WLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 205 ~-~s~~kaa~~----~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
. .+..+++.. .|.+++.+|+ ++ .+|+++|+++|.+ .+.+|+++.. +.+|.++|+++|+++|+++
T Consensus 163 ~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~~--------~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~ 232 (447)
T PRK00451 163 VHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVDD--------DTAAVVVQYP-NFFGVIEDLEEIAEIAHAG 232 (447)
T ss_pred cCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcCC--------CeEEEEEECC-CCCCeeCCHHHHHHHHHHC
Confidence 4 555665543 5789999999 66 9999999999976 4667777775 7899999999999999999
Q ss_pred CceEEe--chhcccccccCccccccccCccccceeeecCCcc-----ccccccceeEEecChhhHHHhhcc---------
Q psy9807 279 DVWLHV--DAAYAGSAFICPENRYLMKGVELADSFNFNPHKW-----MLVTFDCSAMWLKDPSWVVNAFNV--------- 342 (561)
Q Consensus 279 ~~~lhV--DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~-----l~~P~g~g~l~~r~~~~l~~~~~~--------- 342 (561)
|+|++| |.... +.+..+ +.-.+|+++.++||| +++| ++|++++++. .+.. +..
T Consensus 233 ~~~~iv~~d~~~~-g~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~-~~~~-~~~~~~g~~~~~ 301 (447)
T PRK00451 233 GALFIVGVDPVSL-GLLKPP-------GEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKK-LVRQ-MPGRLVGETVDA 301 (447)
T ss_pred CCEEEEEcChHHh-ccCCCc-------ccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHH-HHhh-CCCCEeeeeccc
Confidence 999998 64422 222111 112459999999997 5556 7898888653 2222 110
Q ss_pred --CCCccccC-CCCCCCCCCccccc-CcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc
Q psy9807 343 --DPLYLKHD-QQGSAPDYRHWQIP-LGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL 417 (561)
Q Consensus 343 --~~~yl~~~-~~~~~~~~~~~~~~-~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~ 417 (561)
...|.... ...........+.. +++. ..++..+..++.++.+|++++.++..++++++.+.|+++++++++..+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 381 (447)
T PRK00451 302 DGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPF 381 (447)
T ss_pred CCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCe
Confidence 00111000 00000000000000 0110 1124445567778999999999999999999999999998898863322
Q ss_pred ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcH
Q psy9807 418 MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNE 497 (561)
Q Consensus 418 ~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~ 497 (561)
...+++ ++. .+
T Consensus 382 ~~~~~v-------------------------------------------------------------------~~~-~~- 392 (447)
T PRK00451 382 FNEFVV-------------------------------------------------------------------RLP-KP- 392 (447)
T ss_pred EEEEEE-------------------------------------------------------------------ecC-CC-
Confidence 222222 211 11
Q ss_pred HHHHHHHHHHhCCcEEE---EeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 498 INEKLLKRINGNGKIHL---VPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 498 ~~~~l~~~L~~~g~~~~---~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
..++.++|.++|.+.. ++.......++|++++ .++|++|+++++++|+++
T Consensus 393 -~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~-~~~t~e~i~~l~~~L~~~ 445 (447)
T PRK00451 393 -AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVT-EKRTKEDIDALVAALGEV 445 (447)
T ss_pred -HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 3478888888875421 1111111348999966 456888999999999865
No 35
>KOG1549|consensus
Probab=99.93 E-value=7.8e-24 Score=213.32 Aligned_cols=209 Identities=16% Similarity=0.101 Sum_probs=156.9
Q ss_pred CCCCccccccCCCCCChHHHHHHHHHhh---c-cccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEe
Q psy9807 86 HWHSPKFHAYFPTANSYPAIVADILSDS---I-ACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQ 161 (561)
Q Consensus 86 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~---~-n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t 161 (561)
+...|-|+++..+++..+.++..++... + |++... ... .+..--+++++.+|+++|.++. +.+||
T Consensus 40 ~~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~~-y~w-~~~~~~E~aR~~VAklInAd~~---------dIiFt 108 (428)
T KOG1549|consen 40 HGTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSRS-YGW-KAEDAVEAAREQVAKLINADPS---------DIVFT 108 (428)
T ss_pred CCCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCccc-cch-hhhHHHHHHHHHHHHHhCCCCC---------cEEEe
Confidence 4567889999999999988876554433 2 444331 111 1222245688999999999875 69999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHh---ccCCeEEeeC-CCCccChhhHHH
Q psy9807 162 GTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLD---WLGKMLDLPK-EFLACSGGKGGG 236 (561)
Q Consensus 162 ~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~---~g~~v~~v~~-~~g~~d~~~Le~ 236 (561)
+|+|+||.+++...-.... + +....++....+ .|+.++++. .|..++.+|+ .++..|++.+++
T Consensus 109 s~ATEs~Nlvl~~v~~~~~-----------~-~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~ 176 (428)
T KOG1549|consen 109 SGATESNNLVLKGVARFFG-----------D-KTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLRE 176 (428)
T ss_pred CCchHHHHHHHHHhhcccc-----------c-cccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHH
Confidence 9999999777655321110 0 001123333334 777777653 4688999999 999999999999
Q ss_pred HHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCC
Q psy9807 237 VIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPH 316 (561)
Q Consensus 237 ~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~H 316 (561)
.|+. ++++|.+.+.+++.|.+.|++||+++|+++|+.+|+|+||+.+....+ ++.+ .+|.+++++|
T Consensus 177 ~i~~--------~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vD-----V~el-n~D~~s~s~H 242 (428)
T KOG1549|consen 177 AIRS--------KTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVD-----VQEL-NADFLSISAH 242 (428)
T ss_pred hcCC--------CceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCcccc-----HHHc-Cchheeeecc
Confidence 9988 789999999999999999999999999999999999999997655443 2222 5699999999
Q ss_pred ccccccccceeEEecC
Q psy9807 317 KWMLVTFDCSAMWLKD 332 (561)
Q Consensus 317 K~l~~P~g~g~l~~r~ 332 (561)
||++.|. +|+||+|.
T Consensus 243 K~ygp~~-iGaLYvr~ 257 (428)
T KOG1549|consen 243 KIYGPPG-IGALYVRR 257 (428)
T ss_pred cccCCCc-ceEEEEcc
Confidence 9998766 99999986
No 36
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.93 E-value=1.5e-23 Score=217.90 Aligned_cols=341 Identities=13% Similarity=0.045 Sum_probs=223.2
Q ss_pred ccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHH
Q psy9807 94 AYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALL 173 (561)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~ 173 (561)
.|.+++...+..+.+.+..... . ..+|...++.+++.+++++++|.++. ...++++|||+++..++.
T Consensus 2 ~~~~~~~~~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~g~~~~--------~~~~~~~~~t~al~~~~~ 68 (356)
T cd06451 2 LLIPGPSNVPPRVLKAMNRPML----G-HRSPEFLALMDEILEGLRYVFQTENG--------LTFLLSGSGTGAMEAALS 68 (356)
T ss_pred cccCCCcCCCHHHHHHhCCCcc----C-CCCHHHHHHHHHHHHHHHHHhcCCCC--------CEEEEecCcHHHHHHHHH
Confidence 3455555555544454433221 1 25677778889999999999999543 246789999999877765
Q ss_pred HHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCc
Q psy9807 174 GAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSD 249 (561)
Q Consensus 174 ~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~ 249 (561)
+... + ++++++.... ++ +...++..|.+++.+|. .++.+|++++++.+.+ . +
T Consensus 69 ~~~~----------~-------g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~--~-----~ 124 (356)
T cd06451 69 NLLE----------P-------GDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQ--H-----D 124 (356)
T ss_pred HhCC----------C-------CCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhc--c-----C
Confidence 4310 0 2344444333 43 45566778899999999 6789999999999864 1 4
Q ss_pred eEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEE
Q psy9807 250 LLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMW 329 (561)
Q Consensus 250 p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~ 329 (561)
|.+|+++...+.+|.+.|+++|+++|+++|+++++|++|+.+....+ .. -..+|.++.++|||++.|.|+|+++
T Consensus 125 ~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~-----~~-~~~~d~~~~s~~K~l~~p~g~G~l~ 198 (356)
T cd06451 125 IKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFR-----MD-EWGVDVAYTGSQKALGAPPGLGPIA 198 (356)
T ss_pred CCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCcccc-----cc-ccCccEEEecCchhccCCCCcceeE
Confidence 66788888889999999999999999999999999999874332111 00 0135999999999999999999999
Q ss_pred ecChhhHHHhhc--cCC-CccccCCCCCCCCCCccc--ccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy9807 330 LKDPSWVVNAFN--VDP-LYLKHDQQGSAPDYRHWQ--IPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQL 403 (561)
Q Consensus 330 ~r~~~~l~~~~~--~~~-~yl~~~~~~~~~~~~~~~--~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~ 403 (561)
+++. .+..... ... .|...... ..+.... ...+-.. ....+..+++.+...+++++.++..++++++.+.
T Consensus 199 ~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~ 274 (356)
T cd06451 199 FSER-ALERIKKKTKPKGFYFDLLLL---LKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREG 274 (356)
T ss_pred ECHH-HHHHHHhcCCCCceeecHHHH---HhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9754 3333221 111 11110000 0000000 0011111 1345677888888889999999999999999999
Q ss_pred HhcCCCeEEecccc--ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhh
Q psy9807 404 VRSDDRFEVIYEVL--MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 481 (561)
Q Consensus 404 l~~~~g~~l~~~~~--~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~ 481 (561)
|++. ++++..++. .+.++|
T Consensus 275 L~~~-g~~~~~~~~~~~~~~~~---------------------------------------------------------- 295 (356)
T cd06451 275 LEAL-GLKLLAKPELRSPTVTA---------------------------------------------------------- 295 (356)
T ss_pred HHHc-CCeeccCcccCCCceEE----------------------------------------------------------
Confidence 9987 888865321 223221
Q ss_pred hhhhcceeeecCCCcHHHHHHHHHHHhC-CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 482 EVLMGLVCFRLKGPNEINEKLLKRINGN-GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 482 ~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
++..+ ......+.++|.+. |.....+.......++|++++ ++++++||++++++|+++.
T Consensus 296 --------~~~~~-~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~-~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 296 --------VLVPE-GVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHM-GEATREDVLGVLSALEEAL 355 (356)
T ss_pred --------EECCC-CCCHHHHHHHHHHhCCEEEecccccccCCEEEEecC-CCCCHHHHHHHHHHHHHHh
Confidence 11111 11134778888887 654433222222349999966 4578899999999998764
No 37
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.93 E-value=8.6e-23 Score=214.31 Aligned_cols=275 Identities=15% Similarity=0.090 Sum_probs=173.4
Q ss_pred ccccCCCCCChHHHHHHHHHhh----ccccccccccChhhHHHHHHHHHHHHHhcCC-CccccccCCCCCCeEEeCChhH
Q psy9807 92 FHAYFPTANSYPAIVADILSDS----IACIGFTWIASPACTELEVVMLDWLGKMLDL-PKEFLACSGGKGGGVIQGTASE 166 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~----~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~-~~~~~~~~~~~~~g~~t~ggT~ 166 (561)
||++-.+++.++.++..+.... .|+.. .+..+.......++.+..+.+.+|. +++ ..+||+|+|+
T Consensus 2 yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~~~~---------~i~~t~g~te 71 (382)
T TIGR03403 2 YLDNNATTMLDPKVKELMDPFFCDIYGNPNS-LHQFGTATHPAIAEALDKLYKGINARDLD---------DIIITSCATE 71 (382)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHhcCcCCcc-ccHHHHHHHHHHHHHHHHHHHHcCcCCCC---------eEEEeCCHHH
Confidence 7777777776665543332222 23332 2222222333334444555566776 332 6799999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH---HHhccCCeEEeeC-CCCccChhhHHHHHhhh
Q psy9807 167 ATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV---MLDWLGKMLDLPK-EFLACSGGKGGGVIQRK 241 (561)
Q Consensus 167 anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka---a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~ 241 (561)
++..++.+........ .+ .+.+++...+ .++... +...|.+++.+|. +++.+|+++|++++.+
T Consensus 72 al~~~~~~~~~~~~~~---~~--------~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~- 139 (382)
T TIGR03403 72 SNNWVLKGVYFDEILK---GG--------KNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITE- 139 (382)
T ss_pred HHHHHHHHHHHhhccc---CC--------CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhccc-
Confidence 9877766542110000 00 1134444333 444433 3456889999999 7889999999999876
Q ss_pred chhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccc
Q psy9807 242 SDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV 321 (561)
Q Consensus 242 ~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~ 321 (561)
.+.+|++++.++.||.+.|+++|+++|++||+++|||++++.+....+- . -..+|++++++|||+ +
T Consensus 140 -------~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~-----~-~~~~D~~~~s~~K~~-g 205 (382)
T TIGR03403 140 -------KTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDV-----Q-KAGVDFLSFSAHKFH-G 205 (382)
T ss_pred -------CCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCc-----c-ccCCCEEEEcchhhC-C
Confidence 4567888999999999999999999999999999999998865432221 1 113599999999985 6
Q ss_pred cccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcch-HHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy9807 322 TFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRS-LKLWFVLRLLGVKYLQEYIRKQISLAKEF 400 (561)
Q Consensus 322 P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~a-l~lw~~l~~~g~~g~~~~~~~~~~la~~l 400 (561)
|.|+|++++|+...+ .+ ++.... ...... .++-.+.+ +.+..+++.. .+.++...++...+++++
T Consensus 206 p~G~g~l~vr~~~~~------~p-~~~g~~--~~~~~~----~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l 271 (382)
T TIGR03403 206 PKGVGGLYIRKGVEL------TP-LFHGGE--HMGGRR----SGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRL 271 (382)
T ss_pred CCceEEEEECCCCCC------CC-cccCCC--CCCCcc----cCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 999999999875321 11 111000 000000 11112222 2444555543 335778888999999999
Q ss_pred HHHHhcCCCeEEeccc
Q psy9807 401 EQLVRSDDRFEVIYEV 416 (561)
Q Consensus 401 ~~~l~~~~g~~l~~~~ 416 (561)
.+.|+++|+++++.+.
T Consensus 272 ~~~L~~~~~~~~~~~~ 287 (382)
T TIGR03403 272 EDALLELPDVFVVGDR 287 (382)
T ss_pred HHHHhcCCCEEEECCC
Confidence 9999999999988653
No 38
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=2.5e-23 Score=218.40 Aligned_cols=346 Identities=12% Similarity=0.061 Sum_probs=221.6
Q ss_pred ccccCCCCCChHHHHHHH---HHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHH
Q psy9807 92 FHAYFPTANSYPAIVADI---LSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEAT 168 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~---l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~an 168 (561)
||++-.+++.+..++..+ +.....+....+..+....++.+++.+.+++++|.+++ ..+|++|+|++|
T Consensus 3 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---------~i~~~~g~t~a~ 73 (381)
T PRK02948 3 YLDYAATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ---------GIYFTSGGTESN 73 (381)
T ss_pred eccCCCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEeCcHHHHH
Confidence 677777776666655433 32222223345666677788899999999999998754 678999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc-c-chHHHH---HHhccCCeEEeeC-CCCccChhhHHHHHhhhc
Q psy9807 169 LVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA-C-TELEVV---MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKS 242 (561)
Q Consensus 169 l~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s-~-~s~~ka---a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~ 242 (561)
..++.+....... .++.++... + .|+... ++..|.+++.+|. +++.+|+++|++.+.+
T Consensus 74 ~~~~~~~~~~~~~--------------~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-- 137 (381)
T PRK02948 74 YLAIQSLLNALPQ--------------NKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITP-- 137 (381)
T ss_pred HHHHHHHHHhccC--------------CCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCC--
Confidence 8877665432100 012333333 3 444443 4556889999998 7789999999999866
Q ss_pred hhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc
Q psy9807 243 DREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT 322 (561)
Q Consensus 243 ~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P 322 (561)
.+.+|+.+..++.||.+.|+++|+++|+++|+++|||++++.+....+ +.. ..+|+++.++||+++ |
T Consensus 138 ------~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~-----~~~-~~~d~~~~s~~K~~g-p 204 (381)
T PRK02948 138 ------DTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPID-----VFE-MGIDSLSVSAHKIYG-P 204 (381)
T ss_pred ------CCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccC-----ccc-CCCCEEEecHHhcCC-C
Confidence 467899999999999999999999999999999999998875432211 111 135999999999765 8
Q ss_pred ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy9807 323 FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFE 401 (561)
Q Consensus 323 ~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~ 401 (561)
.|+|++++++...+.. +..... ....+. .++-. .....+..+++.+. ++++++.++..++++++.
T Consensus 205 ~G~G~l~~~~~~~~~~-------~~~~~~--~~~~~~----~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~ 270 (381)
T PRK02948 205 KGVGAVYINPQVRWKP-------VFPGTT--HEKGFR----PGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFL 270 (381)
T ss_pred CcEEEEEEcCCCCCCC-------cccCCC--CCCCcC----CCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 8999999976421100 000000 000000 01111 12233344444432 467888899999999999
Q ss_pred HHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhh
Q psy9807 402 QLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 481 (561)
Q Consensus 402 ~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~ 481 (561)
+.|+++ ++++......+ |+
T Consensus 271 ~~L~~~-~~~v~~~~~~~---~~--------------------------------------------------------- 289 (381)
T PRK02948 271 EQIQTL-PLPIEVEGHST---SC--------------------------------------------------------- 289 (381)
T ss_pred HHHhcC-CCCEEEeCCCc---cC---------------------------------------------------------
Confidence 999988 66554221000 00
Q ss_pred hhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeee-------------------ECCEEEEEEEecCCCCCHHHHHHH
Q psy9807 482 EVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSK-------------------IRDVYFLRMAVCSRYSESSDMIYS 542 (561)
Q Consensus 482 ~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-------------------~~g~~~lR~~~~~~~t~~~di~~l 542 (561)
...+++|...+.+ ..++...|.+.|+....+.. .....++|+|++ +++|++|++++
T Consensus 290 --~~~i~~~~~~~~~--~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~-~~~t~~di~~l 364 (381)
T PRK02948 290 --LPHIIGVTIKGIE--GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFG-QQTTKDQIDTT 364 (381)
T ss_pred --cCCEEEEEeCCCC--HHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcC-CCCCHHHHHHH
Confidence 0012333332212 24556667666644432221 112468999966 67789999999
Q ss_pred HHHHHHHHHHHHH
Q psy9807 543 WNEIKTLTEELLK 555 (561)
Q Consensus 543 ~~~l~~~~~~~~~ 555 (561)
+++|+++.+.+.+
T Consensus 365 ~~~l~~~~~~~~~ 377 (381)
T PRK02948 365 IHALETIGNQFYR 377 (381)
T ss_pred HHHHHHHHHHHhc
Confidence 9999998776654
No 39
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.92 E-value=1.2e-22 Score=214.73 Aligned_cols=349 Identities=10% Similarity=0.020 Sum_probs=214.9
Q ss_pred CCccccccCCCCCChHHHHHHHHHhhc----cccccccccCh-hhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeC
Q psy9807 88 HSPKFHAYFPTANSYPAIVADILSDSI----ACIGFTWIASP-ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQG 162 (561)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~sp-~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ 162 (561)
.+..||++...++. |..+.+.+...+ ++....|..++ ....++++..+ + +++|.+++ ..+||+
T Consensus 26 ~~~iyld~~a~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~---------~v~~~~ 93 (406)
T TIGR01814 26 NAVIYLDGNSLGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED---------EVVVMN 93 (406)
T ss_pred CCcEEecCCCcCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC---------cEEEeC
Confidence 34578887766665 444444443332 22222333321 22334444433 4 88998754 679999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec-cc-ch----HHHHHHhccCCe----EEeeC-CCCccCh
Q psy9807 163 TASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP-AC-TE----LEVVMLDWLGKM----LDLPK-EFLACSG 231 (561)
Q Consensus 163 ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~-s~-~s----~~kaa~~~g~~v----~~v~~-~~g~~d~ 231 (561)
|+|+++..++..... . + ..+..++.. .+ .| +...++..|.++ +.++. .++.+|+
T Consensus 94 ~~t~~l~~~~~~~~~----~----~-------~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 158 (406)
T TIGR01814 94 TLTINLHLLLASFYK----P----T-------PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRL 158 (406)
T ss_pred CchHHHHHHHHHhcC----C----c-------CCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCH
Confidence 999987665543210 0 0 011233333 22 33 344445567776 46666 6788999
Q ss_pred hhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCcccccee
Q psy9807 232 GKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSF 311 (561)
Q Consensus 232 ~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi 311 (561)
+++++.++. . ..++.+|++++.++.+|.+.|+++|+++||++|++++||++|+.+.+..+ +.. ..+|++
T Consensus 159 ~~l~~~~~~--~---~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id-----~~~-~gvD~~ 227 (406)
T TIGR01814 159 EDILDTIEK--N---GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLD-----LHD-WGVDFA 227 (406)
T ss_pred HHHHHHHHh--c---CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccc-----ccc-CCCCEE
Confidence 999998864 2 12578899999999999999999999999999999999999998765432 111 135999
Q ss_pred eecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCC-----CCCCCccccc-CcCCc-chHHHHHHHHHhhHH
Q psy9807 312 NFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGS-----APDYRHWQIP-LGRRF-RSLKLWFVLRLLGVK 384 (561)
Q Consensus 312 ~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~-----~~~~~~~~~~-~sr~~-~al~lw~~l~~~g~~ 384 (561)
++++||||++|.| |+++++.+... ........|........ ........++ ++... ....+-.+++.+...
T Consensus 228 ~~s~hK~l~g~pG-~~l~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~ 305 (406)
T TIGR01814 228 CWCTYKYLNAGPG-AGAFVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQA 305 (406)
T ss_pred EEcCccccCCCCC-eEEEEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhc
Confidence 9999999987778 66776544321 11111122211110000 0000000011 11111 234556677777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCeEEecccc----ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHH
Q psy9807 385 YLQEYIRKQISLAKEFEQLVRSD----DRFEVIYEVL----MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEY 456 (561)
Q Consensus 385 g~~~~~~~~~~la~~l~~~l~~~----~g~~l~~~~~----~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~ 456 (561)
|++++.++...+++++.+.|++. |+++++.+.. .++
T Consensus 306 g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~------------------------------------ 349 (406)
T TIGR01814 306 GMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQ------------------------------------ 349 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCe------------------------------------
Confidence 89999999999999999999875 4688876532 234
Q ss_pred HHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCH
Q psy9807 457 IRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSES 536 (561)
Q Consensus 457 ~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~ 536 (561)
++|..+ .+ ...+.+.|.+.|.+ +. ..+..++|+|+++++||+
T Consensus 350 -------------------------------v~~~~~-~~--~~~~~~~L~~~gi~-v~---~~~~~~iRiS~~~~~nt~ 391 (406)
T TIGR01814 350 -------------------------------LSLTHP-VP--GKAVFQALIKRGVI-GD---KREPSVIRVAPVPLYNTF 391 (406)
T ss_pred -------------------------------EEEEec-CC--HHHHHHHHHHCCEE-Ee---ccCCCeEEEechhccCCH
Confidence 344332 11 34678888877754 33 233458999987778899
Q ss_pred HHHHHHHHHHHHHH
Q psy9807 537 SDMIYSWNEIKTLT 550 (561)
Q Consensus 537 ~di~~l~~~l~~~~ 550 (561)
+||++++++|+++.
T Consensus 392 ~did~l~~~l~~~~ 405 (406)
T TIGR01814 392 VDVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
No 40
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.92 E-value=8.1e-23 Score=215.46 Aligned_cols=322 Identities=11% Similarity=0.002 Sum_probs=217.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
.++.+.++-+++.+++++++|.+.. ...+++++||.++..++....+ .++++++.
T Consensus 36 ~~~~~~~~~~~~~~~l~~~~g~~~~--------~~vi~~~~gt~a~~~a~~~~~~-----------------~Gd~Vlv~ 90 (401)
T PLN02409 36 RSPAFPALTKELLEDVKYIFKTKSG--------TPFIFPTTGTGAWESALTNTLS-----------------PGDKVVSF 90 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCC--------CEEEEeCCcHHHHHHHHHhcCC-----------------CCCEEEEe
Confidence 4788889999999999999999753 2568999999988666544210 02355555
Q ss_pred ccc---chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH--Hh
Q psy9807 203 PAC---TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV--CR 276 (561)
Q Consensus 203 ~s~---~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i--a~ 276 (561)
... ..+...++..|.+++.++. .++.+|+++|++++.+ +. ..++.+|+.++.+|.||.+.|+++|+++ |+
T Consensus 91 ~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~--~~--~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~ 166 (401)
T PLN02409 91 RIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQ--DT--NHKIKAVCVVHNETSTGVTNDLAGVRKLLDCA 166 (401)
T ss_pred CCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhh--Cc--CCCccEEEEEeecccccccCCHHHHHHHHhhh
Confidence 544 3334566777899999998 5566899999999975 31 1246789999999999999999999999 99
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc--CCCccccCCCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV--DPLYLKHDQQGS 354 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~--~~~yl~~~~~~~ 354 (561)
++|++++||++++.+....+ +..+ .+|+++.++||||++|.|+|+++++++ .+...... .+.|.....
T Consensus 167 ~~g~~~vvD~v~s~g~~~id-----~~~~-~~D~~~~s~~K~l~~P~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~--- 236 (401)
T PLN02409 167 QHPALLLVDGVSSIGALDFR-----MDEW-GVDVALTGSQKALSLPTGLGIVCASPK-ALEASKTAKSPRVFFDWAD--- 236 (401)
T ss_pred ccCcEEEEEcccccCCcccc-----cccc-CccEEEEcCccccCcCCCcceeEECHH-HHHHHhcCCCCCeecCHHH---
Confidence 99999999999885433221 1111 359999999999999999999998654 33332211 112221000
Q ss_pred CCCCCccc-c-cCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc---ccceeeecccC
Q psy9807 355 APDYRHWQ-I-PLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL---MGLVCFRLKHW 428 (561)
Q Consensus 355 ~~~~~~~~-~-~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~---~~~v~f~~~~~ 428 (561)
..++...+ . ..+-. .....+-.+++.+...|++++.++..++++++.+.|++. |++++.+.. .+.
T Consensus 237 ~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~-------- 307 (401)
T PLN02409 237 YLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDT-------- 307 (401)
T ss_pred HHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccc--------
Confidence 00000000 0 01111 123455667777778899999999999999999999987 888876421 211
Q ss_pred ccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHh
Q psy9807 429 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRING 508 (561)
Q Consensus 429 ~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~ 508 (561)
+++|+++. +....++.+.|.+
T Consensus 308 ----------------------------------------------------------v~~~~~p~-~~~~~~l~~~l~~ 328 (401)
T PLN02409 308 ----------------------------------------------------------VTAVVVPE-GIDSAEIVKNAWK 328 (401)
T ss_pred ----------------------------------------------------------eEEEeCCC-CCCHHHHHHHHHH
Confidence 12333321 1112467777765
Q ss_pred CCcEEEEee-eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 509 NGKIHLVPS-KIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 509 ~g~~~~~~~-~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
...+.+.+. ......++|++.+. +++++|+.+++++|.++..+
T Consensus 329 ~~~i~i~~G~~~~~~~~~Rig~~g-~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 329 KYNLSLGLGLNKVAGKVFRIGHLG-NVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred hCCEEEEcCCCcccCCEEEEcCCC-CCCHHHHHHHHHHHHHHHHH
Confidence 544555433 32234689999987 45888999999999887654
No 41
>PRK14012 cysteine desulfurase; Provisional
Probab=99.92 E-value=5.5e-23 Score=217.31 Aligned_cols=276 Identities=13% Similarity=0.084 Sum_probs=177.5
Q ss_pred ccccccCCCCCChHHHHHHHHHhhc--cccccccc----cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCC
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDSI--ACIGFTWI----ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGT 163 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~--n~~~~~~~----~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~g 163 (561)
+-||++-.+++.++.++..+..... +....... .+-.....-+++.+++++++|.+++ ..+|++|
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~---------~v~~~~g 74 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR---------EIVFTSG 74 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC---------eEEEeCC
Confidence 3588888777776666544333221 21111111 1111234455677889999998754 5799999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHH---hccCCeEEeeC-CCCccChhhHHHHH
Q psy9807 164 ASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVML---DWLGKMLDLPK-EFLACSGGKGGGVI 238 (561)
Q Consensus 164 gT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~---~~g~~v~~v~~-~~g~~d~~~Le~~i 238 (561)
||+++..++.+.......+ ++.+++...+ .++..++. ..|.+++.++. +++.+|+++|+++|
T Consensus 75 ~t~al~~~l~~l~~~~~~~-------------gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i 141 (404)
T PRK14012 75 ATESDNLAIKGAAHFYQKK-------------GKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAM 141 (404)
T ss_pred HHHHHHHHHHHHHHhhcCC-------------CCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhc
Confidence 9999988876654321110 1234443333 55554443 35888999998 88899999999999
Q ss_pred hhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcc
Q psy9807 239 QRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKW 318 (561)
Q Consensus 239 ~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~ 318 (561)
.+ .+.+|++++.++.+|.+.|+++|.++|+++|+++|+|+|++.+....+ +.. ..+|++++++||.
T Consensus 142 ~~--------~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~-----~~~-~~~D~~~~s~~K~ 207 (404)
T PRK14012 142 RD--------DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPID-----LSK-LKVDLMSFSAHKI 207 (404)
T ss_pred CC--------CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccC-----ccc-CCCCEEEEehhhc
Confidence 76 467899999999999999999999999999999999999986554322 111 1469999999995
Q ss_pred ccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy9807 319 MLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLA 397 (561)
Q Consensus 319 l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la 397 (561)
+ +|.|+|++++++.... ...+.+. . ++... .+. .++... ..+.+-.++... ..++.++.++...++
T Consensus 208 ~-gp~g~G~l~~~~~~~~----~~~~~~~-g---~~~~~--~~~-~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~ 274 (404)
T PRK14012 208 Y-GPKGIGALYVRRKPRV----RLEAQMH-G---GGHER--GMR-SGTLPTHQIVGMGEAARIA-KEEMATENERIRALR 274 (404)
T ss_pred c-CCCceEEEEEecCCCC----CCCceec-C---CCccC--Ccc-CCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHH
Confidence 5 6889999999875321 1111111 0 00000 000 001111 112222333332 345677888999999
Q ss_pred HHHHHHHhcCCCeEEec
Q psy9807 398 KEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 398 ~~l~~~l~~~~g~~l~~ 414 (561)
+++.+.|+++|++.+..
T Consensus 275 ~~l~~~L~~~~~i~~~~ 291 (404)
T PRK14012 275 DRLWNGIKDIEEVYLNG 291 (404)
T ss_pred HHHHHHHhcCCCEEEeC
Confidence 99999999998888764
No 42
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.91 E-value=5.6e-22 Score=209.29 Aligned_cols=339 Identities=10% Similarity=0.025 Sum_probs=216.9
Q ss_pred cccccCCCCCChHHHHHHHHHhhcc--c-cccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHH
Q psy9807 91 KFHAYFPTANSYPAIVADILSDSIA--C-IGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 167 (561)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n--~-~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~a 167 (561)
.||++..+++.++.++..+...... . ....|..+....++.+++.+.+++++|.++. ..++++|+|++
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~---------~v~~~~~~t~~ 89 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP---------EVVFGANATSL 89 (397)
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC---------eEEEeCCHHHH
Confidence 6888876666666655433332211 1 1123444445567778899999999998753 47889999988
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch----HHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhh
Q psy9807 168 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE----LEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQR 240 (561)
Q Consensus 168 nl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s----~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~ 240 (561)
+...+.+..... .+ ++++++...+ .| +...++..|.+++.++. . ++.+|+++|++.|.+
T Consensus 90 l~~~~~~~~~~~-------~~-------gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~ 155 (397)
T TIGR01976 90 TFLLSRAISRRW-------GP-------GDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSP 155 (397)
T ss_pred HHHHHHHHHhcC-------CC-------CCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCC
Confidence 654443321110 00 2244444333 33 33556778999999998 3 789999999999866
Q ss_pred hchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccc
Q psy9807 241 KSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWML 320 (561)
Q Consensus 241 ~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~ 320 (561)
.+.+|+.+..++.+|.+.|+++|+++|++||++++||+||+.+....+ +.. ..+|++++++|||++
T Consensus 156 --------~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-----~~~-~~~d~~~~s~~K~~g 221 (397)
T TIGR01976 156 --------RTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLID-----VQA-TGADFLTCSAYKFFG 221 (397)
T ss_pred --------CceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCC-----HHH-cCCCEEEEechhhcC
Confidence 567899999999999999999999999999999999999865422111 111 135999999999986
Q ss_pred ccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc-chHHHHHHHHHhhHH--------------H
Q psy9807 321 VTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGVK--------------Y 385 (561)
Q Consensus 321 ~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~--------------g 385 (561)
|. +|++++++. .+.........|..... ...+ . .+++.+ ..+.++.+++.+... +
T Consensus 222 -~~-~G~l~~~~~-~~~~l~~~~~~~~~~~~---~~~~---~-~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~ 291 (397)
T TIGR01976 222 -PH-MGILWGRPE-LLMNLPPYKLTFSYDTG---PERF---E-LGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVAS 291 (397)
T ss_pred -Cc-eEEEEEcHH-HHhhCCCccccCccCCC---cchh---c-CCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHH
Confidence 54 788888653 33222111112211100 0000 0 123332 245566677666433 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeccc----cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHH
Q psy9807 386 LQEYIRKQISLAKEFEQLVRSDDRFEVIYEV----LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQI 461 (561)
Q Consensus 386 ~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~ 461 (561)
++++.++..++++++.+.|+++++++++.+. ..+++.|
T Consensus 292 ~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------- 333 (397)
T TIGR01976 292 FQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSF-------------------------------------- 333 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEE--------------------------------------
Confidence 6778889999999999999998889887641 3445444
Q ss_pred HHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee-----------eECCEEEEEEEec
Q psy9807 462 SLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS-----------KIRDVYFLRMAVC 530 (561)
Q Consensus 462 ~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~-----------~~~g~~~lR~~~~ 530 (561)
...+.+ ..++.++|.+.|...-... ...+..++|+|++
T Consensus 334 -----------------------------~~~~~~--~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~ 382 (397)
T TIGR01976 334 -----------------------------TVHGLP--PQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLA 382 (397)
T ss_pred -----------------------------EeCCcC--HHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEee
Confidence 222211 3467888888875543321 1123458999977
Q ss_pred CCCCCHHHHHHHHHHH
Q psy9807 531 SRYSESSDMIYSWNEI 546 (561)
Q Consensus 531 ~~~t~~~di~~l~~~l 546 (561)
. ++|++||++++++|
T Consensus 383 ~-~~t~~di~~l~~~l 397 (397)
T TIGR01976 383 H-YNTAEEVDRLLEAL 397 (397)
T ss_pred c-cCCHHHHHHHHHhC
Confidence 5 66888999999864
No 43
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.91 E-value=1.7e-21 Score=204.51 Aligned_cols=310 Identities=12% Similarity=0.060 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
..+++.+.+++++|.++ .+|++|||++|..++.+.... ++++++.... ++.
T Consensus 64 ~~~~l~~~lA~~~g~~~-----------~~~~~g~t~a~~~al~~l~~~-----------------gd~Vlv~~~~h~s~ 115 (387)
T PRK09331 64 PIADFHEDLAEFLGMDE-----------ARVTHGAREGKFAVMHSLCKK-----------------GDYVVLDGLAHYTS 115 (387)
T ss_pred HHHHHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHhcCC-----------------CCEEEECCCchHHH
Confidence 45555666788888853 588999999998877664211 2244444333 777
Q ss_pred HHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchh-hcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEe
Q psy9807 209 EVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDR-EMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHV 284 (561)
Q Consensus 209 ~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~-~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhV 284 (561)
..++...|.+++.+|. +++.+|+++|++.|.+ .. ..+..+.+|+++..++.+|.+.|+++|+++|++||+++||
T Consensus 116 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~--~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~liv 193 (387)
T PRK09331 116 YVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEE--VKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLL 193 (387)
T ss_pred HHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHH--hhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEE
Confidence 7788888999999987 4678999999999975 31 1223577899999999999999999999999999999999
Q ss_pred chhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccccc
Q psy9807 285 DAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIP 364 (561)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (561)
|+||+.+.+..+.. .. .+|.++.++|||+++|.+.|++++++ +.+.........|.... ..+ +.
T Consensus 194 D~a~~~g~~~~~~~---~~---g~D~~~~s~~K~l~~~~~~G~l~~~~-~~i~~~~~~~~~~~~~~-----~~~----~~ 257 (387)
T PRK09331 194 NGAYTVGRMPVDGK---KL---GADFIVGSGHKSMAASAPSGVLATTE-EYADKVFRTSRKFGVKE-----VEL----LG 257 (387)
T ss_pred ECCcccCCcCCCHH---Hc---CCCEEEeeCcccccCCCCEEEEEECH-HHHhhcccccCCCcccc-----eee----ec
Confidence 99998654422211 11 35999999999999999999988854 33433323222232110 000 11
Q ss_pred C-cCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc--ccccceeeecccCccccccccchhhH
Q psy9807 365 L-GRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE--VLMGLVCFRLKHWQIPLGRRFRSLKL 441 (561)
Q Consensus 365 ~-sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~--~~~~~v~f~~~~~~~~~~~~~~~~k~ 441 (561)
. .+...+..++.++..+-.. .+.+++.+++++++++.|++++|++++.+ ...+++.|+......
T Consensus 258 ~~~~~~~~~~~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~----------- 324 (387)
T PRK09331 258 CTLRGAPLVTLMASFPHVVER--VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDE----------- 324 (387)
T ss_pred eecCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhH-----------
Confidence 1 1222344555555443221 23566778899999999999999999853 234454443211000
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECC
Q psy9807 442 WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRD 521 (561)
Q Consensus 442 w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g 521 (561)
.. ........++.+.|.+.|...+.+ ..
T Consensus 325 ----------------------------------------------~~---~~~~~~~~~~~~~L~~~gI~~~~~---~~ 352 (387)
T PRK09331 325 ----------------------------------------------IA---KKHKRRGFFLYEELKKRGIHGIKP---GA 352 (387)
T ss_pred ----------------------------------------------Hh---hhccccchhHHHHHHHcCceEEcc---CC
Confidence 00 000111246888888887652221 23
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 522 VYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 522 ~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
..++|+..+. .+++|+++++++|+++.++
T Consensus 353 ~~i~ri~~~g--~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 353 TKEFKLSTYG--LTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred ceEEEEEecc--CCHHHHHHHHHHHHHHHHh
Confidence 4467776544 4788999999999988665
No 44
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.91 E-value=7.1e-22 Score=202.18 Aligned_cols=334 Identities=13% Similarity=0.039 Sum_probs=233.5
Q ss_pred CCCCCCccccccCCCCCChHHHHHHHHHh-hcc--ccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE
Q psy9807 84 VTHWHSPKFHAYFPTANSYPAIVADILSD-SIA--CIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI 160 (561)
Q Consensus 84 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n--~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~ 160 (561)
+.++.+-.|+|.-..+....++ .+.+.. ... .+.......+...+||+++ ++++|.+ ..++
T Consensus 41 ~~nf~SNdYLGLa~~~~~~~a~-~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~l----A~f~g~e-----------~al~ 104 (388)
T COG0156 41 VLNFCSNDYLGLASHPELIEAA-KAAIRRYGVGAGGSRLISGTSDLHVELEEEL----ADFLGAE-----------AALL 104 (388)
T ss_pred eEeeeccCcccccCCHHHHHHH-HHHHHHhCCCCCCcCcccCCcHHHHHHHHHH----HHHhCCC-----------cEEE
Confidence 4567788898877544322222 222222 111 2222355677788888866 6667776 4588
Q ss_pred eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEEeeCCCCccChhhHHHH
Q psy9807 161 QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLDLPKEFLACSGGKGGGV 237 (561)
Q Consensus 161 t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~ 237 (561)
.++|..||+..+.+...+ +-+++..+ .|+.+++++.+.+++.++ +.|+++||+.
T Consensus 105 f~SGy~AN~~~i~~l~~~-------------------~dli~~D~lnHASiidG~rls~a~~~~f~----HnD~~~Le~~ 161 (388)
T COG0156 105 FSSGFVANLGLLSALLKK-------------------GDLIFSDELNHASIIDGIRLSRAEVRRFK----HNDLDHLEAL 161 (388)
T ss_pred EcccchhHHHHHHHhcCC-------------------CcEEEEechhhhhHHHHHHhCCCcEEEec----CCCHHHHHHH
Confidence 888999998777663221 23444444 999999999999999999 8999999999
Q ss_pred HhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccC--cc--ccceeee
Q psy9807 238 IQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKG--VE--LADSFNF 313 (561)
Q Consensus 238 i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~g--i~--~aDsi~~ 313 (561)
|++ .+..+.++.+|+.....++.|.+.||++|+++|++||+|+.||.||+.+ ++.+..++.++. ++ ..|+++.
T Consensus 162 l~~--~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~G-v~G~~GrG~~e~~g~~~~~vdi~~g 238 (388)
T COG0156 162 LEE--ARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVG-VLGPNGRGLAEHFGLEPEEVDIIVG 238 (388)
T ss_pred HHh--hhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEcccccc-ccCCCCccHHHHhCCCCccceEEEE
Confidence 988 6544335788999999999999999999999999999999999999854 556666665533 32 3489999
Q ss_pred cCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHH
Q psy9807 314 NPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQ 393 (561)
Q Consensus 314 ~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~ 393 (561)
++.|.|+ ..|.++..+........+...+|++...- .+..+...-.+++.+- ...++.++.
T Consensus 239 TlsKAlG---s~Gg~v~g~~~~~d~L~~~ar~~ifStal--------------pP~~aaa~~~al~~l~--~~~~~r~~L 299 (388)
T COG0156 239 TLGKALG---SSGGYIAGSAALIDYLRNRARPFIFSTAL--------------PPAVAAAALAALRILE--EGPERRERL 299 (388)
T ss_pred Echhhhc---ccCceeeCcHHHHHHHHHhCCceeccCCC--------------CHHHHHHHHHHHHHHH--hCHHHHHHH
Confidence 9999998 67888887876666555666777765420 0122223333444333 456677888
Q ss_pred HHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcc
Q psy9807 394 ISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS 473 (561)
Q Consensus 394 ~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~ 473 (561)
.+++.++++.++.. ++.+. +..+.++.+-+
T Consensus 300 ~~~~~~~~~~~~~~-~~~~~-~s~s~I~pv~~------------------------------------------------ 329 (388)
T COG0156 300 QELAAFFRSLLKAL-GLVLL-PSESPIIPVIL------------------------------------------------ 329 (388)
T ss_pred HHHHHHHHHHHHhc-CCccC-CCCCCeeeeEe------------------------------------------------
Confidence 89999999766654 55542 33334432211
Q ss_pred CchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEE---EeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 474 DDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHL---VPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 474 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~---~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
+++....++...|.+.|.... .||++.|...||++++..+ |++||+++++++.++
T Consensus 330 --------------------gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~h-t~~~I~~l~~~l~~~ 387 (388)
T COG0156 330 --------------------GDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAH-TEEDIDRLAEALSEV 387 (388)
T ss_pred --------------------CCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCC-CHHHHHHHHHHHHhh
Confidence 344557788888988865433 4889899999999988766 778999999998764
No 45
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=4.3e-22 Score=201.85 Aligned_cols=321 Identities=14% Similarity=0.105 Sum_probs=229.3
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
..+|.+..+-+++.+.+..+|+.+.. .--+++++||.++-.++.....+ ++++++
T Consensus 31 h~s~~F~~~~~~~~~~L~~v~~t~~~--------~~~ll~gsGt~amEAav~sl~~p-----------------gdkVLv 85 (383)
T COG0075 31 HRSPDFVGIMKEVLEKLRKVFGTENG--------DVVLLSGSGTLAMEAAVASLVEP-----------------GDKVLV 85 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCC--------cEEEEcCCcHHHHHHHHHhccCC-----------------CCeEEE
Confidence 58899999999999999999998742 14578899998876665543211 235666
Q ss_pred eccc---chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 202 SPAC---TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 202 ~~s~---~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
..+. ..+.+.+...|.+++.+.. .....|+++++++|++ +. ....|.++++.|+||..+|+++|+++|++
T Consensus 86 ~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~--~~----~~~~V~~vH~ETSTGvlnpl~~I~~~~k~ 159 (383)
T COG0075 86 VVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDK--DP----DIKAVAVVHNETSTGVLNPLKEIAKAAKE 159 (383)
T ss_pred EeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhc--CC----CccEEEEEeccCcccccCcHHHHHHHHHH
Confidence 5555 7788889999999999999 7889999999999986 21 45689999999999999999999999999
Q ss_pred cCceEEechh--cccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc-CC-CccccCCCC
Q psy9807 278 KDVWLHVDAA--YAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV-DP-LYLKHDQQG 353 (561)
Q Consensus 278 ~~~~lhVDaA--~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~-~~-~yl~~~~~~ 353 (561)
||..++||+. +||.-+-.+++ |+ |.+..+.+|+|++|.|.|++.++++..- ..... .+ -|+.....-
T Consensus 160 ~g~l~iVDaVsS~Gg~~~~vd~w-----gi---Dv~itgSQK~l~~PPGla~v~~S~~a~e-~~~~~~~~~~ylDL~~~~ 230 (383)
T COG0075 160 HGALLIVDAVSSLGGEPLKVDEW-----GI---DVAITGSQKALGAPPGLAFVAVSERALE-AIEERKHPSFYLDLKKWL 230 (383)
T ss_pred cCCEEEEEecccCCCcccchhhc-----Cc---cEEEecCchhccCCCccceeEECHHHHH-HHhcCCCCceeecHHHHH
Confidence 9999999974 56544333333 45 9999999999999999999999776433 22222 22 344322100
Q ss_pred CCC-CCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc--cccceeeecccCc
Q psy9807 354 SAP-DYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV--LMGLVCFRLKHWQ 429 (561)
Q Consensus 354 ~~~-~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~--~~~~v~f~~~~~~ 429 (561)
... +. .....+-+ -...++-.+++.+-.+|++.+++++..+++++++.++++ ||+++.++ .++.|
T Consensus 231 ~~~~~~--~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tv-------- 299 (383)
T COG0075 231 KYMEKK--GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTV-------- 299 (383)
T ss_pred HHHhhc--CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCce--------
Confidence 000 00 01111111 123566778888999999999999999999999999998 99998733 12222
Q ss_pred cccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC
Q psy9807 430 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN 509 (561)
Q Consensus 430 ~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~ 509 (561)
.++..+..-+ ..++...+.++
T Consensus 300 ----------------------------------------------------------ta~~~P~g~~-~~~~~~~~~~~ 320 (383)
T COG0075 300 ----------------------------------------------------------TAIKVPEGVD-DKKVRRALLKE 320 (383)
T ss_pred ----------------------------------------------------------EEEECCCCCC-cHHHHHHHHHh
Confidence 2222221111 22344466666
Q ss_pred CcEEEE-eeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 510 GKIHLV-PSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 510 g~~~~~-~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+.+.++ +...-...++|++.|. +.+..|+..++.+|..+..++
T Consensus 321 ~g~~i~gg~~~l~gkifRIGhMG-~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 321 YGVEIAGGQGPLKGKIFRIGHMG-NVRPEDVLAALAALEAALREL 364 (383)
T ss_pred CCEEecccccccCccEEEEecCc-cCCHHHHHHHHHHHHHHHHHc
Confidence 445544 4443444599999998 778899999999999888765
No 46
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.90 E-value=5.5e-22 Score=206.79 Aligned_cols=321 Identities=11% Similarity=0.025 Sum_probs=210.2
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
.+.+.++.+++.+.+++++|.++.. ...+||+|||+++..++.+.... ++++++..
T Consensus 30 ~~~~~~~~~~~r~~la~l~~~~~~~-------~~i~~t~~~t~al~~~~~~l~~~-----------------~~~vlv~~ 85 (363)
T TIGR02326 30 DSDYNIVVEQIRQQLLALATAEEGY-------TSVLLQGSGTFAVEAVIGSAVPK-----------------DGKLLVVI 85 (363)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCCCc-------eEEEEcCCCHHHHHHHHHhcCCC-----------------CCeEEEEe
Confidence 3567778888999999999997531 14689999999987766543110 12344433
Q ss_pred cc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC
Q psy9807 204 AC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD 279 (561)
Q Consensus 204 s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~ 279 (561)
+. +. +.+.+...|.+++.+|. .++.+|++++++.+.+ .. .+.+|+.++..+.||.+.|+++|+++||+||
T Consensus 86 ~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~~----~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g 159 (363)
T TIGR02326 86 NGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAA--DP----AITHIALVHCETTTGILNPIEAVAKLAHRHG 159 (363)
T ss_pred CChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhh--CC----CccEEEEEeecCCccccCcHHHHHHHHHHcC
Confidence 33 32 34666778899999999 7889999999999875 21 2446788888999999999999999999999
Q ss_pred ceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCC-ccccCCCCCCCCC
Q psy9807 280 VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPL-YLKHDQQGSAPDY 358 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~-yl~~~~~~~~~~~ 358 (561)
++++||++++.+....+ +..+ .+|+++.++||||++|.|.|++++++.. +........+ |+...........
T Consensus 160 ~~livD~~~~~g~~~~~-----~~~~-~~D~~~~s~~K~l~~p~G~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (363)
T TIGR02326 160 KVTIVDAMSSFGGIPID-----IAEL-HIDYLISSANKCIQGVPGFGFVIARQAE-LAACKGNARSLSLDLYDQWRCMED 232 (363)
T ss_pred CEEEEEccccccCcccc-----hhhc-CccEEEecCccccccCCcceEEEECHHH-HHHhhcCCCceeecHHHHHHHHhc
Confidence 99999998875433221 1111 3599999999999999999999997652 2222111111 1110000000000
Q ss_pred CcccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc--cccceeeecccCcccccc
Q psy9807 359 RHWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV--LMGLVCFRLKHWQIPLGR 434 (561)
Q Consensus 359 ~~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~--~~~~v~f~~~~~~~~~~~ 434 (561)
..-...++.. +..+.+..+++.+..+ +++++.++..+++.++.+.|+++ |++++.++ ..+++
T Consensus 233 ~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~------------- 298 (363)
T TIGR02326 233 NHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPII------------- 298 (363)
T ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceE-------------
Confidence 0000001111 2345566677777665 58889999999999999999987 88876543 23322
Q ss_pred ccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC-cHHHHHHHHHHHhCCcEE
Q psy9807 435 RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP-NEINEKLLKRINGNGKIH 513 (561)
Q Consensus 435 ~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~-~~~~~~l~~~L~~~g~~~ 513 (561)
++|++.+. +.....+.+.|.++|.++
T Consensus 299 -----------------------------------------------------~~~~~~~~~~~~~~~v~~~L~~~gi~v 325 (363)
T TIGR02326 299 -----------------------------------------------------TSFYSPEDPDYRFADFYQRLKEQGFVI 325 (363)
T ss_pred -----------------------------------------------------EEEECCCCCCCCHHHHHHHHHHCCEEE
Confidence 22222211 111346788888886554
Q ss_pred EEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 514 LVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 514 ~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
.+....+..++|++++.. .+.+|+++++++|+++.
T Consensus 326 -~~g~~~~~~~iRi~~~~~-~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 326 -YPGKVSQVDCFRIGNIGE-VDAADITRLLTAIGKAM 360 (363)
T ss_pred -ECCcCCCCCEEEEecCCC-CCHHHHHHHHHHHHHHh
Confidence 333222346899997654 57889999999998764
No 47
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.90 E-value=1.7e-21 Score=205.66 Aligned_cols=313 Identities=14% Similarity=0.043 Sum_probs=195.1
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
++...++.+++.+++++++|.+.+ ..+|+.+|+.+...++..++... ++ ++.+++..
T Consensus 59 ~~g~~~~~~~~~~~la~~~g~~~~---------~v~~~~~g~~~~~~~~~~~~~~~-------~~-------gd~Vl~~~ 115 (398)
T cd00613 59 SQGRLQALFELQTMLCELTGMDVA---------NASLQDEATAAAEAAGLAAIRAY-------HK-------RNKVLVPD 115 (398)
T ss_pred hhhHHHHHHHHHHHHHHHHCCCcc---------ceeccCchHHHHHHHHHHHHhcc-------cC-------CCEEEEcC
Confidence 455668889999999999998743 34666656655444444433210 00 12344444
Q ss_pred cc-chHHHHHHhcc----CCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCH-HHHHHHHh
Q psy9807 204 AC-TELEVVMLDWL----GKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCL-EEIGQVCR 276 (561)
Q Consensus 204 s~-~s~~kaa~~~g----~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl-~eI~~ia~ 276 (561)
+. .+...++...+ .+++.+|. +++.+|+++|++++.+ .+.+|+++..+ .+|.+.|+ ++|+++|+
T Consensus 116 ~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--------~t~~viv~~~~-~~G~~~~~l~~i~~la~ 186 (398)
T cd00613 116 SAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSE--------EVAALMVQYPN-TLGVFEDLIKEIADIAH 186 (398)
T ss_pred ccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCC--------CeEEEEEECCC-CCceecchHHHHHHHHH
Confidence 44 55555555554 78889998 7788999999998866 46677777765 67999885 99999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-----cceeEEecChhhHHHhhccC-CCccccC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-----DCSAMWLKDPSWVVNAFNVD-PLYLKHD 350 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-----g~g~l~~r~~~~l~~~~~~~-~~yl~~~ 350 (561)
+||+|++||++|+++....+.. ...+|+++.++|||+ .|. ++|++++++. .+. .+... ..+....
T Consensus 187 ~~g~~livD~~~~~~~~~~~~~------~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~~-~~~~~~~~~~~~~ 257 (398)
T cd00613 187 SAGALVYVDGDNLNLTGLKPPG------EYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LVR-FLPGRLVGVTKDA 257 (398)
T ss_pred hcCCEEEEEeccccccCCCChH------HcCCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hHh-hCCCCeecccccc
Confidence 9999999999987543322211 113599999999999 774 4567777543 222 22110 0110000
Q ss_pred CCCC--CCCCC----c-------ccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc
Q psy9807 351 QQGS--APDYR----H-------WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL 417 (561)
Q Consensus 351 ~~~~--~~~~~----~-------~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~ 417 (561)
.... ..++. . ..+.......+...|..+..++.++++++.++..++++++.+.|+++++......+.
T Consensus 258 ~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 337 (398)
T cd00613 258 EGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPF 337 (398)
T ss_pred CCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCe
Confidence 0000 00000 0 000000112344567778888999999999999999999999999885543222222
Q ss_pred ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC-c
Q psy9807 418 MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP-N 496 (561)
Q Consensus 418 ~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~-~ 496 (561)
..+++|++ ... +
T Consensus 338 ~~~v~~~~-------------------------------------------------------------------~~~~~ 350 (398)
T cd00613 338 FHEFVLRL-------------------------------------------------------------------PPLYG 350 (398)
T ss_pred eEEEEEEc-------------------------------------------------------------------CCcch
Confidence 23334332 211 1
Q ss_pred HHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHH
Q psy9807 497 EINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEI 546 (561)
Q Consensus 497 ~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 546 (561)
....++.++|.+.|... ....+.+..++|+++ +.++|++|||+++++|
T Consensus 351 ~~~~~~~~~L~~~gi~~-~~~~~~~~~~lRis~-~~~~t~edid~~~~~L 398 (398)
T cd00613 351 IRAEDLAKALIDGGFHA-PTMYLPVDGTLMIEP-TETETKEELDALLEAL 398 (398)
T ss_pred HHHHHHHHhhhhcCccc-cccccCCCCeEEEEc-CCCCCHHHHHHHHHhC
Confidence 22457788888887543 222233556899996 4677999999998764
No 48
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.90 E-value=1.1e-21 Score=205.02 Aligned_cols=315 Identities=13% Similarity=-0.050 Sum_probs=201.4
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEe-CChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQ-GTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t-~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
..++.+.++.+++++.+++++|.++. ...+|+ +|||+++-.++... .. + .+..+
T Consensus 41 hr~~~f~~~~~~~r~~l~~l~~~~~~--------~~v~~~~gs~T~~~~~~~~~l----~~----~---------~~~~v 95 (378)
T PRK03080 41 HRQKPVKALLKRVIEGTRELLSLPEG--------YEVGIVPGSDTGAWEMALWSL----LG----A---------RRVDH 95 (378)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEECCchHHHHHHHHHhc----CC----C---------CcceE
Confidence 34678899999999999999999753 246766 58999876555332 10 0 01234
Q ss_pred Eeccc--chHHH-HHHhccC-CeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 201 ASPAC--TELEV-VMLDWLG-KMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 201 v~~s~--~s~~k-aa~~~g~-~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+...+ ..+.. +++..|. +++.++. .++..|+++++ . +..|++++.+|.||.+.|+++|++
T Consensus 96 i~~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~----~---------~~~V~~~h~~t~tG~~~pi~~I~~-- 160 (378)
T PRK03080 96 LAWESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVD----F---------DRDVVFTWNGTTTGVRVPVARWIG-- 160 (378)
T ss_pred EEeCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcC----C---------CCCEEEEecCCccceeccchhhcc--
Confidence 44334 44443 3345577 8999988 66677766532 2 224889999999999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccC-----CCccccC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVD-----PLYLKHD 350 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~-----~~yl~~~ 350 (561)
|+||++++||++++.+....+ ++ .+|++.+++||||++|.|+|+++++++. +...-... +.|+...
T Consensus 161 ~~~g~~~vVDa~qs~G~~pid-----v~---~iD~~~~s~~K~l~~P~G~g~l~v~~~~-~~~~~p~~~~~~~~~~~~~~ 231 (378)
T PRK03080 161 ADREGLTICDATSAAFALPLD-----WS---KLDVYTFSWQKVLGGEGGHGMAILSPRA-VERLESYTPARPIPKFFRLT 231 (378)
T ss_pred ccCCCeEEEecccccccCCCC-----HH---HCcEEEEehhhhCCCCCceEEEEECHHH-HHhhhcccCCCCCchhheec
Confidence 889999999999987665543 12 2499999999999999999999998653 32211111 1122110
Q ss_pred CCCCCCC-CCcccccCcCCc-chHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-c--cc-cceee
Q psy9807 351 QQGSAPD-YRHWQIPLGRRF-RSLKLWFVLRLLGVK-YLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-V--LM-GLVCF 423 (561)
Q Consensus 351 ~~~~~~~-~~~~~~~~sr~~-~al~lw~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~--~~-~~v~f 423 (561)
..+.... ....+...+-.. ....+..+++++-.. |++++.+|+.++++++++.|++.++++++.+ + .. .+
T Consensus 232 ~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i--- 308 (378)
T PRK03080 232 KGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTS--- 308 (378)
T ss_pred cchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccE---
Confidence 0000000 000000001111 123345688888887 8999999999999999999999977777642 1 11 23
Q ss_pred ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCc-HHHHHH
Q psy9807 424 RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPN-EINEKL 502 (561)
Q Consensus 424 ~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~l 502 (561)
++|++++.+ ....++
T Consensus 309 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 324 (378)
T PRK03080 309 ----------------------------------------------------------------VTLDFVDAQAAVDAAA 324 (378)
T ss_pred ----------------------------------------------------------------EEEEcCCchHHHHHHH
Confidence 444432200 123456
Q ss_pred HHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 503 LKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 503 ~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
..++.+++.+...+........+|+|++ .+++++||++++++|+++.+++
T Consensus 325 ~~~l~~~~i~v~~g~~~~~~~~vRis~~-~~~t~~di~~l~~al~~~~~~~ 374 (378)
T PRK03080 325 VAKLLRENGAVDIEPYRDAPNGLRIWCG-PTVEPADVEALTPWLDWAFERL 374 (378)
T ss_pred HHHHHHcCCeeccccccCCCCcEEEecC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 6667666644432221112358999965 5778999999999999876543
No 49
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.90 E-value=6.6e-22 Score=194.73 Aligned_cols=303 Identities=17% Similarity=0.121 Sum_probs=193.4
Q ss_pred cccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc
Q psy9807 117 IGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII 196 (561)
Q Consensus 117 ~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~ 196 (561)
....|..+|...++|+. +++++|.. .++|++|||+||.++|.+..+.
T Consensus 27 ~~~~YG~D~~~~~~e~~----~ae~~g~~-----------a~~Fv~sGT~aN~lal~~~~~~------------------ 73 (342)
T COG2008 27 GDDVYGEDPTTNALEQR----IAELFGKE-----------AALFVPSGTQANQLALAAHCQP------------------ 73 (342)
T ss_pred CCCCCCCCHHHHHHHHH----HHHHhCCc-----------eEEEecCccHHHHHHHHHhcCC------------------
Confidence 34568899988888874 58888872 5799999999999999875422
Q ss_pred cceEEecc--c-chHHHHH--HhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---
Q psy9807 197 ANLIASPA--C-TELEVVM--LDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC--- 267 (561)
Q Consensus 197 ~~~vv~~s--~-~s~~kaa--~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp--- 267 (561)
...+++.. + +..+-++ ..+++..+.+.. .+|.|++++++..|.. .|......|.++..+.-| ..|.+-|
T Consensus 74 ~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~-~d~~~~~~~~~~~e~~~t-e~GtVy~l~e 151 (342)
T COG2008 74 GESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRP-DDIHHAPTPLAVLENTAT-EGGTVYPLDE 151 (342)
T ss_pred CCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcC-CCcccCCCceEEEeeccC-CCceecCHHH
Confidence 12233222 2 4444443 344455444444 8999999999999986 132333356555555444 6688855
Q ss_pred HHHHHHHHhhcCceEEechhcccccc--cCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCC
Q psy9807 268 LEEIGQVCRQKDVWLHVDAAYAGSAF--ICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPL 345 (561)
Q Consensus 268 l~eI~~ia~~~~~~lhVDaA~gg~~~--~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~ 345 (561)
|++|.++||+||+.||+|||--+.++ ..+.......++ ||+++++.|.++.|.+ .+++.+.+...++ .
T Consensus 152 l~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~---D~v~~~~tK~g~~~~g--Aiv~gn~~~~~~a-----~ 221 (342)
T COG2008 152 LEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYV---DSVSFCLTKGGGAPVG--AIVFGNRDFAKRA-----R 221 (342)
T ss_pred HHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhC---CEEEEecccCCcceee--eEEEcCHHHHHHH-----H
Confidence 55566789999999999999433332 334444444555 9999999999998864 4555565444332 1
Q ss_pred ccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeec
Q psy9807 346 YLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL 425 (561)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~ 425 (561)
|......++. |..+-+.. ..+-++...-+...-+|..++|++|++.+.+.||+++..|++.|+|..++
T Consensus 222 ~~rK~~Ggl~-----------~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l 289 (342)
T COG2008 222 RWRKRAGGLM-----------RKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRL 289 (342)
T ss_pred HHHHHhcccH-----------hhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEEC
Confidence 2111111111 11121111 01222334446667788888999999999999999999999999977644
Q ss_pred ccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHH
Q psy9807 426 KHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKR 505 (561)
Q Consensus 426 ~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~ 505 (561)
+. ...+.
T Consensus 290 ~~-------------------------------------------------------------------------~~i~~ 296 (342)
T COG2008 290 PE-------------------------------------------------------------------------SAIEA 296 (342)
T ss_pred Ch-------------------------------------------------------------------------HHHHH
Confidence 21 12244
Q ss_pred HHhCCcEEEEeeeECCE-EEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 506 INGNGKIHLVPSKIRDV-YFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 506 L~~~g~~~~~~~~~~g~-~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+...|..+..+-..... ..+||+ +++.|+++||++++..++++.
T Consensus 297 l~~~~~~~~~~~~~~~~~~~vRfv-ts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 297 LRLAGALFYRGVLIGAHGEIVRFV-TSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHhhchhheeeeeccCCCceEEEE-eeccCCHHHHHHHHHHHHHhh
Confidence 44444443332221222 479995 889999999999999988753
No 50
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.89 E-value=5.8e-21 Score=198.32 Aligned_cols=277 Identities=14% Similarity=0.059 Sum_probs=184.2
Q ss_pred ccccCCCCCChHHHHHHHHHhh---c-cccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDS---I-ACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 167 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~---~-n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~a 167 (561)
||++-..++.++.+...+.... + |+....+..+....++.+++++++++++|.+++ ..+||+|+|++
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---------~v~~~~g~t~a 71 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE---------EVIFTSGATES 71 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEeCCHHHH
Confidence 5677766776666544332221 1 211112333455667788899999999999754 68999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccc-cceEEeccc-chHHHH---HHhccCCeEEeeC-CCCccChhhHHHHHhhh
Q psy9807 168 TLVALLGAKAKTMQRVKEAHPDWKDSDII-ANLIASPAC-TELEVV---MLDWLGKMLDLPK-EFLACSGGKGGGVIQRK 241 (561)
Q Consensus 168 nl~al~~ar~~~~~~~~~~~~~~~~~~~~-~~~vv~~s~-~s~~ka---a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~ 241 (561)
+..++.+...... .+ + +.+++...+ .|+... +...|.+++.+|. .++.+|+++|++.+.+
T Consensus 72 ~~~~l~~l~~~~~------~~-------g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~- 137 (353)
T TIGR03235 72 NNLAILGLARAGE------QK-------GKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRP- 137 (353)
T ss_pred HHHHHHHHHHhcc------cC-------CCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCC-
Confidence 8877765432210 00 1 123333323 444433 3345789999998 7889999999998866
Q ss_pred chhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccc
Q psy9807 242 SDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV 321 (561)
Q Consensus 242 ~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~ 321 (561)
.+.+|++++.++.+|.+.|+++|+++|++||+|+|||+||+.+....+- + ...+|++++++|||+ +
T Consensus 138 -------~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~-----~-~~~~D~~~~s~~K~~-g 203 (353)
T TIGR03235 138 -------DTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDL-----S-ADRIDLISCSGHKIY-G 203 (353)
T ss_pred -------CCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccc-----c-ccCCCEEEeehhhcC-C
Confidence 4678999999999999999999999999999999999999866553321 1 114699999999985 6
Q ss_pred cccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy9807 322 TFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEF 400 (561)
Q Consensus 322 P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l 400 (561)
|.|+|+++++++.... ....+.+.... .. ..+. .++.. ...+.+..+++.+ .++.+++.++..++++++
T Consensus 204 p~g~g~l~~~~~~~~~--~~~~~~~~~~~----~~--~~~~-~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l 273 (353)
T TIGR03235 204 PKGIGALVIRKRGKPK--APLKPIMFGGG----QE--RGLR-PGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQL 273 (353)
T ss_pred CCceEEEEEccCcccc--cccCceeeCCC----Cc--Cccc-cCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 9999999998753211 01112111100 00 0000 11222 2234455566654 357888999999999999
Q ss_pred HHHHhcCCCeEEeccc
Q psy9807 401 EQLVRSDDRFEVIYEV 416 (561)
Q Consensus 401 ~~~l~~~~g~~l~~~~ 416 (561)
++.|++ +|++++.++
T Consensus 274 ~~~l~~-~g~~~~~~~ 288 (353)
T TIGR03235 274 RDALQT-LGVKLNGDP 288 (353)
T ss_pred HHHhcc-CCeEEeCCc
Confidence 999988 799987543
No 51
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.89 E-value=8.7e-21 Score=214.02 Aligned_cols=326 Identities=13% Similarity=0.000 Sum_probs=219.3
Q ss_pred hhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh----HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 125 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS----EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT----~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
....++..++.+|+++++|++ ..+|++++| +|++.++.+.... .+. +-...++
T Consensus 564 ~g~~~~~~~~r~~la~i~g~~-----------~v~f~pnaga~ge~a~~~vi~~~~~~-------~Gd-----~~r~~vl 620 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGFD-----------SFSLQPNAGAAGEYAGLMVIRAYHLS-------RGD-----HHRNVCI 620 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-----------eEEEcCCCcHHHHHHHHHHHHHHHhc-------cCC-----CCCCEEE
Confidence 345688889999999999994 468999988 7776666554211 010 0012345
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
+..++ .+....+.+.|.+++.||+ ++|.+|+++|+++|++ .. ..+.+|++|..+|..|.++|+++|+++||++
T Consensus 621 i~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~--~~---~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~ 695 (993)
T PLN02414 621 IPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEA--HK---DNLAALMVTYPSTHGVYEEGIDEICDIIHDN 695 (993)
T ss_pred eCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhc--cC---CCeEEEEEECCCccccccchHHHHHHHHHHc
Confidence 55555 7777778788999999999 8999999999999975 21 1467899999999999999999999999999
Q ss_pred CceEEechhcccccccCccccccccCccccceeeecCCcccccccc-----ceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-----CSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-----~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
|+.++||||+..+...... .+--.+|+++++.||||+.|.| +|+++++.. + ....+.+......+
T Consensus 696 Galv~vDgAq~~a~~~l~~-----p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L---~p~lPg~~v~~~~~ 765 (993)
T PLN02414 696 GGQVYMDGANMNAQVGLTS-----PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--L---APFLPSHPVVPTGG 765 (993)
T ss_pred CCEEEEEecCHHhccCcCC-----ccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh--h---cccCCCCccccCCC
Confidence 9999999998754322111 1122469999999999998876 999998762 2 12223332111101
Q ss_pred CCCCCCcccccCcCCc-------chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc--ccceeee
Q psy9807 354 SAPDYRHWQIPLGRRF-------RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL--MGLVCFR 424 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~-------~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~--~~~v~f~ 424 (561)
. ......+..++++. -++..|.-++.+|.+|+++..++...+|+|++++|++..++....+.. ..-..+.
T Consensus 766 ~-~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~ 844 (993)
T PLN02414 766 I-PRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIID 844 (993)
T ss_pred c-ccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEe
Confidence 0 10001111233332 134558888999999999999999999999999998743332222211 1111111
Q ss_pred cccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC-CcHHHHHHH
Q psy9807 425 LKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG-PNEINEKLL 503 (561)
Q Consensus 425 ~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~-~~~~~~~l~ 503 (561)
+++ ++. ......++.
T Consensus 845 ~~~----------------------------------------------------------------l~~~~g~~~~di~ 860 (993)
T PLN02414 845 LRP----------------------------------------------------------------FKNTAGIEPEDVA 860 (993)
T ss_pred ccc----------------------------------------------------------------cccccCCCHHHHH
Confidence 110 000 001135789
Q ss_pred HHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 504 KRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 504 ~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
++|.+.|....... +.....+|++.+- ..+++|+|+++++++.+..++.+
T Consensus 861 krL~d~Gihapt~~-~pv~~~lmiepTE-~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 861 KRLMDYGFHAPTMS-WPVPGTLMIEPTE-SESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred HHHHHcCcEEeeec-cccCCEEEEEeee-eCCHHHHHHHHHHHHHHHHHHHH
Confidence 99998776444322 3456689999775 55888999999999999888764
No 52
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.89 E-value=9.8e-21 Score=196.52 Aligned_cols=341 Identities=13% Similarity=0.047 Sum_probs=215.5
Q ss_pred CCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHH
Q psy9807 96 FPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGA 175 (561)
Q Consensus 96 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~a 175 (561)
.|+|..++..+.+.+...++. .++...++.+++.+.+++++|.++.. ...++++|||+++..++...
T Consensus 4 ~p~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~la~~~~~~~~~-------~~i~~~~~gt~~l~~~~~~~ 70 (355)
T TIGR03301 4 TPGPLSTSATVRDAMLVDWCH------WDSEFNDVTDQVRDRLLALAGGDDNH-------TCVLLQGSGTFAVEATIGSL 70 (355)
T ss_pred cCCCCCCCHHHHHHhhhhccC------CCHHHHHHHHHHHHHHHHHhcCCCCC-------cEEEEeCCcHHHHHHHHHhc
Confidence 454555544444444443332 23344577888999999999998641 13568999999987776553
Q ss_pred HHHHHHHHHhcCCCCCCcccccceEEeccc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceE
Q psy9807 176 KAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLL 251 (561)
Q Consensus 176 r~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~ 251 (561)
... .+++++.... ++ +..++...|.+++.++. +++.+|++++++.+.+ . ..+.
T Consensus 71 ~~~-----------------~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~--~----~~~~ 127 (355)
T TIGR03301 71 VPR-----------------DGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAA--D----PDIT 127 (355)
T ss_pred cCC-----------------CCeEEEECCCchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHh--C----CCce
Confidence 210 1234444333 33 45667778999999998 6789999999999875 2 1345
Q ss_pred EEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEec
Q psy9807 252 QVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLK 331 (561)
Q Consensus 252 ~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r 331 (561)
+|+.++..|.+|.+.|+++|+++|++||++++||++++.+....+ +... .+|+++.++|||+++|.|+|+++++
T Consensus 128 ~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~-----~~~~-~~d~~~~s~~K~l~~~~G~g~~~~~ 201 (355)
T TIGR03301 128 HVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID-----IEEL-DVDALIASANKCLEGVPGFGFVIAR 201 (355)
T ss_pred EEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccc-----hhhc-CccEEEecCCcccccCCceeEEEEC
Confidence 777788899999999999999999999999999997764322111 1111 3599999999999999999999986
Q ss_pred ChhhHHHhhccCCCccccCCCCCCCCC-CcccccCcCC-cchHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 332 DPSWVVNAFNVDPLYLKHDQQGSAPDY-RHWQIPLGRR-FRSLKLWFVLRLLGVKY-LQEYIRKQISLAKEFEQLVRSDD 408 (561)
Q Consensus 332 ~~~~l~~~~~~~~~yl~~~~~~~~~~~-~~~~~~~sr~-~~al~lw~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~ 408 (561)
+. .+........+|...... ..... .......+.. .....+..+++.+..+| +++..++..++++++.+.|++.
T Consensus 202 ~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~- 278 (355)
T TIGR03301 202 RD-LLEASAGNARSLYLDLYD-QWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL- 278 (355)
T ss_pred HH-HHHHhhCCCCCceeeHHH-HHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-
Confidence 54 333322111111110000 00000 0000001111 12234456677776666 8889999999999999999887
Q ss_pred CeEEecccc--ccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhh
Q psy9807 409 RFEVIYEVL--MGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLM 485 (561)
Q Consensus 409 g~~l~~~~~--~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~ 485 (561)
|++++.++. .++ ++|++.+
T Consensus 279 g~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------------- 300 (355)
T TIGR03301 279 GFQPLLPERWQSPIIVSFLYPD---------------------------------------------------------- 300 (355)
T ss_pred CCeeecCCCCCCCcEEEEECCC----------------------------------------------------------
Confidence 788765432 222 2332211
Q ss_pred cceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 486 GLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 486 ~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
..+....++.++|.++|... .+.......++|+++.. +++++|++++++.|+++
T Consensus 301 --------~~~~~~~~~~~~l~~~gi~i-~~~~~~~~~~iRis~~~-~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 301 --------DPDFDFDDFYQELKERGFVI-YPGKLTLADTFRIGTIG-EIDAADIERLLEAIKDA 354 (355)
T ss_pred --------CCcchHHHHHHHHHHCCEEE-ECCccccccEEEEecCC-CCCHHHHHHHHHHHHhh
Confidence 01111347788888887544 33322223689999654 56888999999999764
No 53
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.89 E-value=6.6e-21 Score=216.31 Aligned_cols=305 Identities=10% Similarity=-0.065 Sum_probs=191.4
Q ss_pred ccccccCCCCCChHHHHHHHHHhh-----ccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCCh
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDS-----IACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTA 164 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~-----~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~gg 164 (561)
--||+|..+++..+..+.+++... .|++ ..+..+..++++.+++++.+++++|.++.. ...+||+|+
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~lga~~~~-------~~VvFtsna 106 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYFNAPPSD-------YACVFTSGA 106 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHhCCCccc-------eEEEEeCCh
Confidence 469999977765655555554433 2433 234456677888899999999999996530 146999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH---HHHHhccCCeEEeeCC---------CCccCh
Q psy9807 165 SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE---VVMLDWLGKMLDLPKE---------FLACSG 231 (561)
Q Consensus 165 T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~---kaa~~~g~~v~~v~~~---------~g~~d~ 231 (561)
|+|+........ +.. ++.+++...+ .|+. +.+...|++++.+|++ .+.+++
T Consensus 107 T~alnlva~~l~-------------~~~---gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~ 170 (805)
T PLN02724 107 TAALKLVGETFP-------------WSS---ESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVV 170 (805)
T ss_pred HHHHHHHHHHCC-------------CCC---CCeEEEeeccccchHHHHHHHHHcCCeEEeccchhcccccccccccccc
Confidence 999654432210 000 1234443333 3433 3333457888888762 233433
Q ss_pred --hhHHHHHhh-hc-hhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc--------CceEEechhcccccccCcccc
Q psy9807 232 --GKGGGVIQR-KS-DREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK--------DVWLHVDAAYAGSAFICPENR 299 (561)
Q Consensus 232 --~~Le~~i~~-~~-~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~--------~~~lhVDaA~gg~~~~~~~~~ 299 (561)
++|++.+.+ .. ....+..+.+|++++.++.+|.+.|+++|..+++.. +++++||||++.+....+
T Consensus 171 ~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piD--- 247 (805)
T PLN02724 171 KSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPD--- 247 (805)
T ss_pred chhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCC---
Confidence 556665421 00 111122457999999999999999999876655532 357999999987665443
Q ss_pred ccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCC---CCCCCC------ccccc-CcCCc
Q psy9807 300 YLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQG---SAPDYR------HWQIP-LGRRF 369 (561)
Q Consensus 300 ~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~---~~~~~~------~~~~~-~sr~~ 369 (561)
+..+ .+|++++++|||++.|.|+|+||+|+.. +.. + .+.|....... ...++. ...++ ++..+
T Consensus 248 --v~~~-~~Dfl~~S~HK~~GgP~G~G~L~vr~~~-~~~-l--~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~ 320 (805)
T PLN02724 248 --LSRY-PADFVVVSFYKIFGYPTGLGALLVRRDA-AKL-L--KKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISF 320 (805)
T ss_pred --hhhc-CCCEEEEecceeccCCCCceEEEEehhh-hhh-h--cCCccCCCceEEEecccceeeccccHHHHhcCCCcch
Confidence 1111 4699999999999999999999998642 211 1 22222110000 000000 00111 12222
Q ss_pred -chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC------CeEEeccc--------cccceeeecccC
Q psy9807 370 -RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD------RFEVIYEV--------LMGLVCFRLKHW 428 (561)
Q Consensus 370 -~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~------g~~l~~~~--------~~~~v~f~~~~~ 428 (561)
..+++..+++++-..|++++.++...|++++.+.|++++ +++++.+. ..++|+|++.+.
T Consensus 321 ~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~ 394 (805)
T PLN02724 321 LSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRA 394 (805)
T ss_pred hHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcC
Confidence 346677788888888899999999999999999999886 58888643 468999988764
No 54
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=4.8e-21 Score=204.81 Aligned_cols=239 Identities=11% Similarity=0.019 Sum_probs=154.9
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEe---CChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQ---GTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t---~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
......++|+.+++.++++||.+++ .-.++ +|||++|+.++.+.... ++.+
T Consensus 74 g~~~~~~iE~~ar~~~a~lf~a~~~---------~~~~~~~~~sgt~an~~v~~al~~~-----------------gd~I 127 (452)
T PTZ00094 74 GNEVVDKIENLCQKRALEAFGLDPE---------EWGVNVQPYSGSPANFAVYTALLQP-----------------HDRI 127 (452)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCcc---------cceeecCCCchHHHHHHHHHHhcCC-----------------CCEE
Confidence 3345577887899999999999754 22344 78999998877664110 1233
Q ss_pred EEeccc-chHHHHH-H-------hcc--CCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC
Q psy9807 200 IASPAC-TELEVVM-L-------DWL--GKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC 267 (561)
Q Consensus 200 vv~~s~-~s~~kaa-~-------~~g--~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp 267 (561)
++...+ .+....+ . ..+ .++..+++ .+|.+|+++|++.+++ . +|.+|++ +.+.+|.+.|
T Consensus 128 i~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~--~-----~~~lvi~--~~s~~g~~~d 198 (452)
T PTZ00094 128 MGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKA--F-----RPKLIIA--GASAYPRDID 198 (452)
T ss_pred EecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHH--h-----CCCEEEE--eCCCCCCccC
Confidence 332222 2211111 0 011 23444555 5799999999999965 2 3444544 3457999999
Q ss_pred HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCcc
Q psy9807 268 LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYL 347 (561)
Q Consensus 268 l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl 347 (561)
+++|+++|+++|+++|||+||+.+.+..+-... .+..+|++++++||||++|.| |++++++.. ...........+
T Consensus 199 i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~---~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~-~~~l~~~~~~~~ 273 (452)
T PTZ00094 199 YKRFREICDSVGAYLMADIAHTSGLVAAGVLPS---PFPYADVVTTTTHKSLRGPRS-GLIFYRKKV-KPDIENKINEAV 273 (452)
T ss_pred HHHHHHHHHHcCCEEEEeccchhccccCCCCCC---CCCCCcEEEcCCccCCCCCCc-eEEEEeccc-chHHHHhhcccc
Confidence 999999999999999999999987765432211 123569999999999999997 777776531 111000000010
Q ss_pred ccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 348 KHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
. +. +.++-. ....++..+++.+...+++++.++..+++++|.+.|++. |+++..
T Consensus 274 ~-------p~-----~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~ 328 (452)
T PTZ00094 274 F-------PG-----LQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVT 328 (452)
T ss_pred C-------CC-----CCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEec
Confidence 0 00 011111 234566677777766778888899999999999999886 888875
No 55
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.88 E-value=1.3e-19 Score=188.79 Aligned_cols=306 Identities=12% Similarity=0.081 Sum_probs=194.2
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
+++.+.+++++|.+ ..++++|||+++..++.+.... ++++++.... ++...
T Consensus 47 ~~l~~~la~~~g~~-----------~i~~~~g~t~al~~~l~~~~~~-----------------gd~Vl~~~~~~~~~~~ 98 (361)
T cd06452 47 KDFHHDLAEFLGMD-----------EARVTPGAREGKFAVMHSLCEK-----------------GDWVVVDGLAHYTSYV 98 (361)
T ss_pred HHHHHHHHHHcCCc-----------eEEEeCCHHHHHHHHHHHhcCC-----------------CCEEEEcCCcchHHHH
Confidence 34444568888883 4689999999987776553210 1234444333 77777
Q ss_pred HHHhccCCeEEeeC-CCC--ccChhhHHHHHhhhchhhc-CCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech
Q psy9807 211 VMLDWLGKMLDLPK-EFL--ACSGGKGGGVIQRKSDREM-CSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~~g--~~d~~~Le~~i~~~~~~~~-g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa 286 (561)
++...|.+++.+|. .++ .+|+++|++++.+ .... +..+.+|+++..++.+|.+.|+++|+++|+++|++++||+
T Consensus 99 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~ 176 (361)
T cd06452 99 AAERAGLNVREVPNTGHPEYHITPEGYAEVIEE--VKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNG 176 (361)
T ss_pred HHHhcCCEEEEEecCCCCCcccCHHHHHHHHHH--HhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEEC
Confidence 78888999999998 444 8999999999965 3211 2356788888999999999999999999999999999999
Q ss_pred hcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 287 AYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
||+.+....+ . ... .+|+++.++||+++.|.++|++++++ ..+.........| ... .... ...+
T Consensus 177 a~~~g~~~~~---~--~~~-~~d~~~~s~~K~l~~~~~~G~l~~~~-~~~~~l~~~~~~~-~~~------~~~~--~~~~ 240 (361)
T cd06452 177 AYTVGRMPVS---G--KEL-GADFIVGSGHKSMAASAPIGVLATTE-EWADIVFRTSQMF-KIK------EVEL--LGCT 240 (361)
T ss_pred CcccCCcCCC---H--HHc-CCCEEEecCCccccCCCCeEEEEECH-HHHHHHhcccccc-ccc------eeee--eccc
Confidence 9985432111 0 011 35999999999999988999888854 3343322222111 100 0000 0111
Q ss_pred -CCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--cccccceeeecccCccccccccchhhHHH
Q psy9807 367 -RRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY--EVLMGLVCFRLKHWQIPLGRRFRSLKLWF 443 (561)
Q Consensus 367 -r~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~k~w~ 443 (561)
+...+..++.++..+ .+.+ +.+++..+.++++.+.|+++||++++. +...+++.|+.....
T Consensus 241 ~~~~~~~~~~~al~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~-------------- 304 (361)
T cd06452 241 LRGAPLVTLMASFPHV-KERV-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFD-------------- 304 (361)
T ss_pred cCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcc--------------
Confidence 112344555555443 2223 445555677899999999999999874 334556555432100
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEE
Q psy9807 444 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVY 523 (561)
Q Consensus 444 ~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~ 523 (561)
...........++.+.|.++|... ... .-..
T Consensus 305 ----------------------------------------------~~~~~~~~~~~~~~~~L~~~gI~~-~~~--~~~~ 335 (361)
T cd06452 305 ----------------------------------------------EIAKKHKRRGYFLYSELKKRGIHG-IKP--GLTR 335 (361)
T ss_pred ----------------------------------------------hhhhhccccchhHHHHHHHcCceE-EcC--CCce
Confidence 000000011125788888887652 211 2234
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 524 FLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 524 ~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
++|++++. .+++|++.++++|+++.
T Consensus 336 ~~ri~~~g--~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 336 YFKLSTYG--LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EEEEEecC--CCHHHHHHHHHHHHHHh
Confidence 88998643 37789999999998653
No 56
>KOG1368|consensus
Probab=99.87 E-value=6.1e-21 Score=180.72 Aligned_cols=302 Identities=14% Similarity=0.118 Sum_probs=199.9
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q psy9807 118 GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 197 (561)
Q Consensus 118 ~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~ 197 (561)
-..|...|.+.+||+++ ++++|-+ .|+|++||||+|+.|++...... + ..
T Consensus 49 DdVyGeD~tt~rLE~~v----A~l~GKE-----------AgLFv~SGTmgNllaIm~Hc~~r-------g--------~e 98 (384)
T KOG1368|consen 49 DDVYGEDPTTNRLEQRV----AELFGKE-----------AGLFVPSGTMGNLLAIMVHCHQR-------G--------SE 98 (384)
T ss_pred cccccCCccHHHHHHHH----HHHhCcc-----------ceeeecccccccHHHHHHHhcCC-------C--------ce
Confidence 34688999999999988 6666654 68999999999999998865431 0 01
Q ss_pred ceEEeccc-chHHHH--HHhccCCeEEeeC-CCCccChhhHHHHHhhhchh-h-cCCceEEEEEecCCCCCc-cccCHHH
Q psy9807 198 NLIASPAC-TELEVV--MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDR-E-MCSDLLQVVATLGTTNCC-AFDCLEE 270 (561)
Q Consensus 198 ~~vv~~s~-~s~~ka--a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~-~-~g~~p~~vv~t~gtt~tG-~idpl~e 270 (561)
-++-+.++ +.++.+ +.++|+.++.+.. +++.||++++|++|.. .. . ....+.+|+..---.++| .+-||++
T Consensus 99 ii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~--~~GD~H~p~T~LIclENT~~~~Gg~vlPle~ 176 (384)
T KOG1368|consen 99 IIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRV--PKGDCHMPPTKLICLENTHNNCGGKVLPLEE 176 (384)
T ss_pred EEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcC--CCCCccCCCceEEEeeccccccCceEeeHHH
Confidence 12223333 666665 3678889999988 9999999999999985 32 2 222345666644444445 6667665
Q ss_pred ---HHHHHhhcCceEEechh--cccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCC
Q psy9807 271 ---IGQVCRQKDVWLHVDAA--YAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPL 345 (561)
Q Consensus 271 ---I~~ia~~~~~~lhVDaA--~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~ 345 (561)
|.++|++||+.||+||| |.+.....-...... +.+||++++++|.|++|.|+ +++.+++.+.++.
T Consensus 177 ~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~---~~fDSVsiCLSKglgAPVGS--ViVG~k~FI~kA~----- 246 (384)
T KOG1368|consen 177 LDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKIC---SAFDSVSICLSKGLGAPVGS--VIVGSKDFIDKAR----- 246 (384)
T ss_pred HHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHH---HhhhhhhhhhhccCCCCccc--EEEccHHHHHHHH-----
Confidence 55689999999999999 444333222222222 34699999999999999865 5555655554432
Q ss_pred ccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-ccccceeee
Q psy9807 346 YLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCFR 424 (561)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~~~v~f~ 424 (561)
++...-.|+ .+-.++.++...+..+.--..+++.++.|..+++.+...+++++-.+ .+++++...
T Consensus 247 ~~RKalGGG--------------mRQsGvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~ 312 (384)
T KOG1368|consen 247 HFRKALGGG--------------MRQSGVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMV 312 (384)
T ss_pred HHHHHhcCc--------------hhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccceeeecchhhcceeeee
Confidence 222211121 22333333333343333334778888899999999998877888555 667775432
Q ss_pred cccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHH
Q psy9807 425 LKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLK 504 (561)
Q Consensus 425 ~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~ 504 (561)
+. ...-..+++.+
T Consensus 313 l~-------------------------------------------------------------------q~~~~~~~l~~ 325 (384)
T KOG1368|consen 313 LC-------------------------------------------------------------------QARLTAEELCK 325 (384)
T ss_pred cc-------------------------------------------------------------------cccCCHHHHHH
Confidence 21 11122467889
Q ss_pred HHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q psy9807 505 RINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIK 547 (561)
Q Consensus 505 ~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 547 (561)
.+.+.|...+.+.. ..+|++ .++..++++++.++..+.
T Consensus 326 ~~~k~gi~lm~~~s----~r~Riv-lh~Qvt~~~ve~~~~~~~ 363 (384)
T KOG1368|consen 326 FLEKNGILLMGGAS----RRIRIV-LHHQVTDEDVEYVKSVLS 363 (384)
T ss_pred HHHHCCeEEeeccc----cceEEE-EEEecCHHHHHHHHHHHH
Confidence 99999877766544 248987 557889999999999885
No 57
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.87 E-value=5.2e-20 Score=192.31 Aligned_cols=322 Identities=12% Similarity=0.012 Sum_probs=209.1
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
+|...+..+++.+.+++++|.+++. ...++++|||.++..++.+.... ++++++..
T Consensus 32 ~~~~~~~~~~~~~~l~~l~~~~~~~-------~~i~~~~~gt~~l~~~~~~l~~~-----------------~~~vlv~~ 87 (368)
T PRK13479 32 DDDFNALTASVRAKLVAIATGEEGY-------TCVPLQGSGTFSVEAAIGSLVPR-----------------DGKVLVPD 87 (368)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCCCc-------eEEEEcCCcHHHHHHHHHhccCC-----------------CCeEEEEe
Confidence 4556678889999999999986421 13568999999987766653210 12344443
Q ss_pred cc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC
Q psy9807 204 AC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD 279 (561)
Q Consensus 204 s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~ 279 (561)
.. +. +.+.+...|.+++.+|. .++.+|++++++++.+ .. .+.+|..++.+|.||.+.|+++|+++|+++|
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~--~~----~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~ 161 (368)
T PRK13479 88 NGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAA--DP----RITHVALVHCETTTGILNPLDEIAAVAKRHG 161 (368)
T ss_pred CCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHh--CC----CCcEEEEEcccCccccccCHHHHHHHHHHcC
Confidence 33 33 34667778999999999 6788999999999865 21 3456778899999999999999999999999
Q ss_pred ceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCC
Q psy9807 280 VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYR 359 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (561)
++++||++++.+....+ +... .+|.++.++|||+++|.|+|++++++. .+........+|.............
T Consensus 162 ~~livDa~~~~g~~~~~-----~~~~-~~d~~v~s~~K~l~g~~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (368)
T PRK13479 162 KRLIVDAMSSFGAIPID-----IAEL-GIDALISSANKCIEGVPGFGFVIARRS-ELEACKGNSRSLSLDLYDQWAYMEK 234 (368)
T ss_pred CEEEEEcccccCCcccc-----cccc-CceEEEecCccccccCCCceEEEECHH-HHHHhhcCCCCeeecHHHHHhhhcc
Confidence 99999987754322111 1111 359999999999999999999999654 3322222222221100000000000
Q ss_pred cccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc--cc-ceeeecccCcccccc
Q psy9807 360 HWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL--MG-LVCFRLKHWQIPLGR 434 (561)
Q Consensus 360 ~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~--~~-~v~f~~~~~~~~~~~ 434 (561)
.-...++.. .....+..+++.+... ++++++++..++++++.+.|++. |++++.++. .+ +++|
T Consensus 235 ~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~----------- 302 (368)
T PRK13479 235 TGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTF----------- 302 (368)
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEE-----------
Confidence 000001111 2234566777776554 47888899999999999999988 887764422 11 2333
Q ss_pred ccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCc-HHHHHHHHHHHhCCcEE
Q psy9807 435 RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPN-EINEKLLKRINGNGKIH 513 (561)
Q Consensus 435 ~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~l~~~L~~~g~~~ 513 (561)
...... ....++.++|.++|.++
T Consensus 303 --------------------------------------------------------~~~~~~~~~~~~l~~~L~~~gi~v 326 (368)
T PRK13479 303 --------------------------------------------------------HAPADPAYDFKEFYERLKEQGFVI 326 (368)
T ss_pred --------------------------------------------------------ECCCCCCcCHHHHHHHHHHCCEEE
Confidence 222111 11357888898887655
Q ss_pred EEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 514 LVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 514 ~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
. +.......++|++++. +++++|+++++++|+++.++
T Consensus 327 ~-~g~~~~~~~iRis~~~-~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 327 Y-PGKLTQVDTFRIGCIG-DVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred e-cCCCCCCCEEEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence 3 2222223479998665 45788999999999887654
No 58
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.87 E-value=1.2e-19 Score=201.09 Aligned_cols=389 Identities=12% Similarity=0.010 Sum_probs=239.2
Q ss_pred CCCHHHHHHHHHHhhcCCCCCCCCcccccc-----CCCCCChHHHHHHHHHhhcccccccc-ccChhhHHHHHHHHHHHH
Q psy9807 66 PDTWQEVMSDIERVIMPGVTHWHSPKFHAY-----FPTANSYPAIVADILSDSIACIGFTW-IASPACTELEVVMLDWLG 139 (561)
Q Consensus 66 ~~~~~~il~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~l~~~~n~~~~~~-~~sp~~~~lE~~~~~~la 139 (561)
+.+--+++..+.+.-..+..-.++..|+|- -+.....|+...++.+. ..+.- +.+...-++-.+..+|++
T Consensus 478 ~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~----hPyqp~e~sQG~lq~i~elq~~l~ 553 (954)
T PRK12566 478 HHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQL----HPFAPREQAEGYRAMIDELEAWLC 553 (954)
T ss_pred CCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcC----CCCCchhhhcCHHHHHHHHHHHHH
Confidence 467788888888765444333334445443 11111112222223222 22222 446666677777889999
Q ss_pred HhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCC
Q psy9807 140 KMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGK 218 (561)
Q Consensus 140 ~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~ 218 (561)
+++|++.. .+...+|+++++.++++.|.....+ +. ....++++..+. .+....+...|.+
T Consensus 554 eLtGmd~~----------Sl~p~sGA~gE~A~Lmair~yh~~~----Ge-----~~r~~vLIp~saHgtNpasa~~~Gie 614 (954)
T PRK12566 554 AITGFDAI----------CMQPNSGAQGEYAGLLAIRRYHRSR----GQ-----SQRDICLIPSSAHGTNPASAQMAGMR 614 (954)
T ss_pred HHHCCCeE----------eecCCchHHHHHHHHHHHHHHHHhc----CC-----CCCCEEEecccccccCHHHHHHCCCE
Confidence 99999742 2445588999999999877643222 11 012234444444 3333446678999
Q ss_pred eEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCcc
Q psy9807 219 MLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPE 297 (561)
Q Consensus 219 v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~ 297 (561)
++.+|+ ++|.+|+++|++.|++ .. ....+|+++..++..+..+|+++|+++||++|++++||||+..+......
T Consensus 615 Vv~Vp~D~~G~iDle~L~a~I~~--~~---~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~ 689 (954)
T PRK12566 615 VVIVECDPDGNVDLDDLKAKAAA--AG---DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLAR 689 (954)
T ss_pred EEEeccCCCCCcCHHHHHHHhhc--cC---CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCC
Confidence 999999 7999999999999974 11 25678888888888877789999999999999999999998643332211
Q ss_pred ccccccCccccceeeecCCccccccccceeEEecChhh---HHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHH
Q psy9807 298 NRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSW---VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLK 373 (561)
Q Consensus 298 ~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~ 373 (561)
.+--.||++++++||||+.|.|.|..+++.-.. +...+...+. ... .+.....+..+..+.-. .-++.
T Consensus 690 -----Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~-~d~--~G~~~r~ga~S~~~~gsa~~l~~ 761 (954)
T PRK12566 690 -----PADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPV-VPV--EGPDPNNGAVSAAPWGSASILPI 761 (954)
T ss_pred -----hhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCC-cCC--CCCCCCCCceeecccchHHHHHH
Confidence 122357999999999999999999999977322 2222221111 000 01000000000000000 01456
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhH
Q psy9807 374 LWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYL 453 (561)
Q Consensus 374 lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~ 453 (561)
.|.-++.+|.+ +.+.......+|+|++++|.+ ++++...+..+. ||.
T Consensus 762 A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~--~~~v~~~~~~~~-~~h----------------------------- 808 (954)
T PRK12566 762 SWMYIAMMGPQ-LADASEVAILSANYLANQLGG--AFPVLYRGRNER-VAH----------------------------- 808 (954)
T ss_pred HHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHh--hCCCCcCCCCCC-eee-----------------------------
Confidence 68888889998 888888889999999999987 444432211111 110
Q ss_pred HHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC-CcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCC
Q psy9807 454 QEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG-PNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSR 532 (561)
Q Consensus 454 ~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~-~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~ 532 (561)
+..+.+++++. ......++.++|.+.|..... ..+.....+|++.+-
T Consensus 809 ------------------------------Efii~~~~l~~~~g~~~~dvakRL~d~Gihapt-~~fPv~~~LmIepTE- 856 (954)
T PRK12566 809 ------------------------------ECILDLRPLKAQTGISEEDVAKRLMDYGFHAPT-MSFPVPGTLMVEPTE- 856 (954)
T ss_pred ------------------------------EEEEEccccccccCCCHHHHHHHHHHCCcEEeE-EeeccCCEEEEEeee-
Confidence 00011111111 011135688999977754433 234456689999774
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 533 YSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 533 ~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
..+++|+|+++++++.+.+++.+
T Consensus 857 ~eskeEIDrf~eAL~~I~~e~~~ 879 (954)
T PRK12566 857 SESKAELDRFVEAMLSIRAEIGK 879 (954)
T ss_pred eCCHHHHHHHHHHHHHHHHHHHH
Confidence 55888999999999999888654
No 59
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.86 E-value=5.9e-20 Score=190.56 Aligned_cols=332 Identities=13% Similarity=0.001 Sum_probs=205.1
Q ss_pred cCCCCCChHHHHHHHHHhhc----cccccccccC---hhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCC-hhH
Q psy9807 95 YFPTANSYPAIVADILSDSI----ACIGFTWIAS---PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGT-ASE 166 (561)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~s---p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~g-gT~ 166 (561)
|.|+|...|.-+.+.+...+ |.+.+.+..+ +.+.++.+++++.++++||.++. ...+||+| ||+
T Consensus 3 ~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~--------~~vvf~~gs~T~ 74 (355)
T cd00611 3 FSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDN--------YKVLFLQGGATG 74 (355)
T ss_pred CCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEEcCCchH
Confidence 45555555444434443333 6666667666 77889999999999999998643 36788877 999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHHHHhccCCeEEeeC-CCCcc-ChhhH-HHHHhhh
Q psy9807 167 ATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVVMLDWLGKMLDLPK-EFLAC-SGGKG-GGVIQRK 241 (561)
Q Consensus 167 anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~kaa~~~g~~v~~v~~-~~g~~-d~~~L-e~~i~~~ 241 (561)
|+..++..... + ..+...+.... ..+.+.++..|.+++.++. +++.. ++.++ +..+.+
T Consensus 75 a~~~~~~~l~~----~------------~~~~~~i~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~- 137 (355)
T cd00611 75 QFAAVPLNLLG----D------------KGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAP- 137 (355)
T ss_pred HHHHHHHhcCC----C------------CCeEEEEECCHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCC-
Confidence 97555443210 0 01123344443 3233345566888999987 44433 53333 233333
Q ss_pred chhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccc
Q psy9807 242 SDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV 321 (561)
Q Consensus 242 ~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~ 321 (561)
.+.+|+.++.+|.||.+. . ++++.||+.+.|||+++.+....+ ++..|....++||+++
T Consensus 138 -------~~~lV~~~h~~t~tG~~~--~---~i~~~~g~~~~VDa~qs~g~~~id--------v~~~~~~~ss~~K~lG- 196 (355)
T cd00611 138 -------DAAYVHYCSNETIHGVEF--D---EVPDTGGVPLVADMSSNILSRPID--------VSKFGVIYAGAQKNLG- 196 (355)
T ss_pred -------CCCEEEEeCCcccccEEc--c---eecccCCCeEEEEccccccCCCCC--------HHHhCEEEeecccccC-
Confidence 467899999999999872 2 455669999999999987766543 1222555566999875
Q ss_pred cccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHHHHHHHHH
Q psy9807 322 TFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRKQISLAKE 399 (561)
Q Consensus 322 P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~~~~la~~ 399 (561)
|.|.|++++++... .+.-...+.+..... ..+.. ...++-. .....+..+++++-.. |++++.+++.+++++
T Consensus 197 P~G~g~l~~~~~~~-~~~~~~~~~~~~~~~---~~~~~--~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~ 270 (355)
T cd00611 197 PAGVTVVIVRKDLL-GKARKITPSMLNYKT---HADNN--SLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQL 270 (355)
T ss_pred CCceEEEEECHHHH-hhcccCCCCcccHHH---HHhcC--CCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 99999999977533 211111112211000 00000 0011111 2456778899999888 799999999999999
Q ss_pred HHHHHhcCCCeE-Eecc--ccc-cceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCc
Q psy9807 400 FEQLVRSDDRFE-VIYE--VLM-GLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD 475 (561)
Q Consensus 400 l~~~l~~~~g~~-l~~~--~~~-~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~ 475 (561)
+.+.|+++||+. ...+ ... .+++|++
T Consensus 271 l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~-------------------------------------------------- 300 (355)
T cd00611 271 LYDTIDNSNGFYRGPVDKRARSRMNVPFRL-------------------------------------------------- 300 (355)
T ss_pred HHHHHHhCccccccCCCHHHcCceEEEEEc--------------------------------------------------
Confidence 999999998863 1111 122 2344433
Q ss_pred hhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 476 RFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 476 ~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
.+. .+..+..+.+.+.|.+ .. ...+..+.+|+|+. +++|++||++++++|+++
T Consensus 301 -----------------~~~-~l~~~~~~~~~r~G~~-~~-~~~~~~g~vR~S~~-~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 301 -----------------GKE-ELEKEFLKEAEAAGMI-GL-KGHRSVGGIRASIY-NALSLEGVQALADFMKEF 353 (355)
T ss_pred -----------------CCh-hhhHHHHHHHHHCCCc-cc-CCCcccCeEEEEcc-CCCCHHHHHHHHHHHHHH
Confidence 222 2233444566677765 22 22122358999976 566889999999999875
No 60
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.85 E-value=1.1e-18 Score=182.37 Aligned_cols=307 Identities=13% Similarity=0.112 Sum_probs=194.1
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.+..+.+++++|.++ .++++|||++|..++.+.... ++.+++.... +|...
T Consensus 54 ~~~~e~lA~~~g~~~-----------~~i~~g~~~a~~~~~~~l~~~-----------------gd~Vl~~~~~h~s~~~ 105 (370)
T TIGR02539 54 HDFLEDLAEFLGMDE-----------ARVTHGAREGKFAVMHALCKE-----------------GDWVVLDGLAHYTSYV 105 (370)
T ss_pred HHHHHHHHHHhCCCc-----------eEEECChHHHHHHHHHHhhCC-----------------CCEEEECCcccHHHHH
Confidence 344556799999864 478899999987766553210 1233332233 77777
Q ss_pred HHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhc-CCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech
Q psy9807 211 VMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREM-CSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 211 aa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~-g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa 286 (561)
+++..|++++.+|. .++.+|+++|+++|.+ .... ...+.+|+++..++.+|.+.|+++|+++|++||++++||+
T Consensus 106 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDe 183 (370)
T TIGR02539 106 AAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEE--VEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNC 183 (370)
T ss_pred HHHHcCCEEEEEecCCcccCCcCHHHHHHHHHH--hhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEEC
Confidence 88889999999997 2478999999999965 3221 1246788888889999999999999999999999999999
Q ss_pred hcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 287 AYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
||+.+.+..+ .. . ..+|.++.++|||++.+.++|+++.++ ..+........+|.... ..+ +..+
T Consensus 184 a~~~g~~~~~-~~----~-~~~di~v~s~sK~~~~~g~~G~l~~~~-~~i~~l~~~~~~~~~~~-----~~~----~~~~ 247 (370)
T TIGR02539 184 AYTVGRMPVS-AK----E-IGADFIVGSGHKSMAASGPCGVLGMSE-EWEDIVLRKSRYSPVKE-----VEL----LGCT 247 (370)
T ss_pred ccccCCcCCC-HH----H-cCCCEEEeeCcccccCCCCEEEEEECH-HHHhhhcccccCCccce-----eee----eccc
Confidence 9986432111 11 1 135999999999999777789888754 33433222222222111 000 0111
Q ss_pred -CCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--ccccccceeeecccCccccccccchhhHHH
Q psy9807 367 -RRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI--YEVLMGLVCFRLKHWQIPLGRRFRSLKLWF 443 (561)
Q Consensus 367 -r~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~--~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~ 443 (561)
....+..++.++... .+.+ +..++..++++++++.|+++ |++++ .+...+++.|+......
T Consensus 248 ~~~~~~~~~~~al~~~-~~~l-~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~------------- 311 (370)
T TIGR02539 248 SRGAPIVTMMASFPHV-VERV-KRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHE------------- 311 (370)
T ss_pred ccccHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhH-------------
Confidence 112233334433321 2222 23445566678999999998 88875 35567776664421000
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEE
Q psy9807 444 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVY 523 (561)
Q Consensus 444 ~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~ 523 (561)
+ ..+.+.....+.+.|.+.|.+.+.+ ....
T Consensus 312 ----------------------------------------------~-~~~~~~~~~~~~~~L~e~GI~~ir~---~~~~ 341 (370)
T TIGR02539 312 ----------------------------------------------I-AQKHKRRGYFLYEELKKRGIHGIRS---GQTK 341 (370)
T ss_pred ----------------------------------------------H-hhhhccccHHHHHHHHhCCCccccC---Ccce
Confidence 0 0001112346788898888752222 2245
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 524 FLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 524 ~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
++|++++ .+ +++|+++++++|+++.++
T Consensus 342 ~iRis~~-~~-t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 342 YFKLSVY-GL-TKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred EEEEEec-CC-CHHHHHHHHHHHHHHHHh
Confidence 8999974 34 778999999999887654
No 61
>PRK07179 hypothetical protein; Provisional
Probab=99.85 E-value=4.2e-19 Score=187.91 Aligned_cols=329 Identities=9% Similarity=-0.003 Sum_probs=198.6
Q ss_pred CCCccccccCCCCCChHHHHHHHHHhhcc-ccccc-cc-cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCC
Q psy9807 87 WHSPKFHAYFPTANSYPAIVADILSDSIA-CIGFT-WI-ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGT 163 (561)
Q Consensus 87 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~~~~-~~-~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~g 163 (561)
+.+-.|+++.. -+.....+.+.+....+ ..... +. ..+...++|+ .+++++|.+ ..+|++|
T Consensus 59 ~~~~~YL~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~----~la~~~g~~-----------~~~~~~s 122 (407)
T PRK07179 59 LQSNDYLNLSG-HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEK----KLAAFTGFE-----------SCLLCQS 122 (407)
T ss_pred eecCCccCCCC-CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHH----HHHHHhCCC-----------cEEEECC
Confidence 45566777663 22222333333333222 21111 21 2245566665 557777775 3589999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhc
Q psy9807 164 ASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKS 242 (561)
Q Consensus 164 gT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~ 242 (561)
||+||..++.+.... +..+++.... .++..++...+.++..++ .+|+++|++.|++
T Consensus 123 G~~An~~~l~~l~~~-----------------g~~v~~~~~~h~s~~~~~~~~g~~~~~~~----~~d~~~l~~~l~~-- 179 (407)
T PRK07179 123 GWAANVGLLQTIADP-----------------NTPVYIDFFAHMSLWEGVRAAGAQAHPFR----HNDVDHLRRQIER-- 179 (407)
T ss_pred HHHHHHHHHHHhCCC-----------------CCEEEEECCcCHHHHHHHHHCCCeEEEec----CCCHHHHHHHHHh--
Confidence 999998877653211 1123332222 677777777777766555 5799999999865
Q ss_pred hhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCcccccccc--Cc-cccceeeecCCccc
Q psy9807 243 DREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMK--GV-ELADSFNFNPHKWM 319 (561)
Q Consensus 243 ~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~--gi-~~aDsi~~~~HK~l 319 (561)
. .+.+|++....+.+|.+.|+++|+++|++||+++|+|++|+.+.. .+..+..+. ++ +.+|+++.++||++
T Consensus 180 ~-----~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~-g~~g~g~~~~~~~~~~vdi~~~S~sK~~ 253 (407)
T PRK07179 180 H-----GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTH-GPQGAGLVAELGLTSRVHFITASLAKAF 253 (407)
T ss_pred c-----CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCc-CCCCCchHHhcCCCCCCCEEEeechHhh
Confidence 2 356788888899999999999999999999999999999975432 222221111 22 24699999999999
Q ss_pred cccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy9807 320 LVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAK 398 (561)
Q Consensus 320 ~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~ 398 (561)
+.+ .|+++.++ ...........++... .+-. ..+..+..+++.+. ...++.++..++.+
T Consensus 254 g~~--~G~l~~~~-~~~~~~~~~~~~~~~~---------------~t~~~~~~aa~~aal~~~~--~~~~~~~~l~~~~~ 313 (407)
T PRK07179 254 AGR--AGIITCPR-ELAEYVPFVSYPAIFS---------------STLLPHEIAGLEATLEVIE--SADDRRARLHANAR 313 (407)
T ss_pred hcc--CeEEEeCH-HHHHHHHHhCcCeeeC---------------CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHH
Confidence 853 77777753 3222211111111110 0111 11222334444432 23457788899999
Q ss_pred HHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhh
Q psy9807 399 EFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 478 (561)
Q Consensus 399 ~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~ 478 (561)
++.+.|+++ |+++.. ..+++.+
T Consensus 314 ~l~~~L~~~-g~~v~~--~~~i~~l------------------------------------------------------- 335 (407)
T PRK07179 314 FLREGLSEL-GYNIRS--ESQIIAL------------------------------------------------------- 335 (407)
T ss_pred HHHHHHHHc-CCCCCC--CCCEEEE-------------------------------------------------------
Confidence 999999987 776552 2234333
Q ss_pred hhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEE---EEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 479 VIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIH---LVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 479 ~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~---~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.. +.......+.+.|.+.|... ..+....+..++|++++. .+|++||++++++|+++.++
T Consensus 336 ------------~~-~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~-~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 336 ------------ET-GSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNA-DLTASDLDRVLEVCREARDE 398 (407)
T ss_pred ------------Ee-CCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECC-CCCHHHHHHHHHHHHHHHHh
Confidence 11 11112356777888887642 223333456799999775 56888999999999887654
No 62
>PLN02721 threonine aldolase
Probab=99.84 E-value=6.6e-19 Score=182.76 Aligned_cols=305 Identities=14% Similarity=0.075 Sum_probs=183.5
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
+..+|...++|+.+ ++++|.+ .++++++||++|+.++.+.... + +++++
T Consensus 36 ~~~~~~~~~l~~~l----a~~~~~~-----------~~~~~~~Gs~a~~~~l~~~~~~---------~-------gd~Vl 84 (353)
T PLN02721 36 LGYDPTALRLEEEM----AKIFGKE-----------AALFVPSGTMGNLISVLVHCDV---------R-------GSEVI 84 (353)
T ss_pred cCCCHHHHHHHHHH----HHHhCCc-----------eeEEecCccHHHHHHHHHHccC---------C-------CCeEE
Confidence 34467667777766 5555654 3588899999998776653210 0 22444
Q ss_pred Eeccc-chHHH---HHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcC-CceEEEEEecCCC-CCccccC---HHH
Q psy9807 201 ASPAC-TELEV---VMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMC-SDLLQVVATLGTT-NCCAFDC---LEE 270 (561)
Q Consensus 201 v~~s~-~s~~k---aa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g-~~p~~vv~t~gtt-~tG~idp---l~e 270 (561)
+.... +++.+ .+...|.+++.+|. +++.+|+++|++.|.+ ....+ ..+.+|+.+..++ .+|.+-| +++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~ 162 (353)
T PLN02721 85 LGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRP--KGDDHFPTTRLICLENTHANCGGRCLSVEYTDK 162 (353)
T ss_pred EcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHh--ccCCCCCcceEEEEeccccccCCccccHHHHHH
Confidence 44444 55655 34667889999998 7788999999999975 32111 2566677655444 4676644 889
Q ss_pred HHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccC
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHD 350 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~ 350 (561)
|+++|++||+++|+|+||........... .......+|++++++|||++.|.| .+++.+++.+.........+
T Consensus 163 l~~l~~~~g~~livD~a~~~~~~~~~~~~-~~~~~~~~d~~~~s~sK~l~~~~G--~~~~~~~~~~~~~~~~~~~~---- 235 (353)
T PLN02721 163 VGELAKRHGLKLHIDGARIFNASVALGVP-VHRLVKAADSVSVCLSKGLGAPVG--SVIVGSKSFIRKAKRLRKTL---- 235 (353)
T ss_pred HHHHHHHcCCEEEEEchhhhcchhhhCCC-HHHHhhhCCEEEEecccccCCcee--eEEecCHHHHHhHHHHHHhc----
Confidence 99999999999999999753221111111 111123569999999999998754 34444554433211100000
Q ss_pred CCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-eccccccceeeecccCc
Q psy9807 351 QQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV-IYEVLMGLVCFRLKHWQ 429 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l-~~~~~~~~v~f~~~~~~ 429 (561)
.+. .+........++. +.+...+.+++..++++++.+.|++++++++ +.++..+.+.|++.+.
T Consensus 236 -~~~------------~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~- 299 (353)
T PLN02721 236 -GGG------------MRQVGVLAAAALV--ALQENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDG- 299 (353)
T ss_pred -CCC------------eehhHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCC-
Confidence 000 0000111111111 1222223345556788899999999888876 5555556655544210
Q ss_pred cccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC
Q psy9807 430 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN 509 (561)
Q Consensus 430 ~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~ 509 (561)
.......+.++|.+.
T Consensus 300 -----------------------------------------------------------------~~~~~~~~~~~L~~~ 314 (353)
T PLN02721 300 -----------------------------------------------------------------SRITAEKLCKSLEEH 314 (353)
T ss_pred -----------------------------------------------------------------ccccHHHHHHHHHhC
Confidence 001134688888877
Q ss_pred CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 510 GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 510 g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
|...... +..++|+++. +.++++|+++++++|+++..
T Consensus 315 gi~v~~~----~~~~lR~~~~-~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 315 GVLLMPG----NSSRIRVVTH-HQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred CcEEecC----CCceEEEEec-CcCCHHHHHHHHHHHHHHhh
Confidence 7654322 3458999965 56789999999999988653
No 63
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.83 E-value=4.4e-19 Score=183.76 Aligned_cols=304 Identities=13% Similarity=-0.028 Sum_probs=196.5
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEe-CChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc-e
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQ-GTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN-L 199 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t-~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~-~ 199 (561)
..++.+.++-+++.+.++++||.|++ ...+|+ ++||.++-.+++..... +++ .
T Consensus 41 hr~~~f~~~~~~~~~~l~~l~~~~~~--------~~v~~~~gsgt~~~Ea~~~nl~~~-----------------g~~~l 95 (360)
T PRK05355 41 HRSKEFEAVAEEAEADLRELLNIPDN--------YKVLFLQGGASLQFAMVPMNLLGG-----------------GKKAD 95 (360)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEEcCCchHHHHHHHHhcCCC-----------------CCeEE
Confidence 35667779999999999999998643 134555 66666554444331110 123 3
Q ss_pred EEeccc--chHHHHHHhccCCeEEeeC-C-CCccChhhHHH-HHhhhchhhcCCceEEEEEecCCCCCcccc-CHHHHHH
Q psy9807 200 IASPAC--TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGG-VIQRKSDREMCSDLLQVVATLGTTNCCAFD-CLEEIGQ 273 (561)
Q Consensus 200 vv~~s~--~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~-~i~~~~~~~~g~~p~~vv~t~gtt~tG~id-pl~eI~~ 273 (561)
++..+. ..+.+.++..|.. ..++. . .+..+..++++ .|++ .+.+|..++..|+||.+. ||++|
T Consensus 96 ~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~--------~~~~V~~th~eTstGv~~~~i~~i-- 164 (360)
T PRK05355 96 YVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSD--------DAAYVHYTSNETIDGTEFHELPDT-- 164 (360)
T ss_pred EEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCC--------CCCEEEEccCCCcceEecCccccc--
Confidence 344444 5566666666654 55555 2 67777777766 6654 467899999999999997 78777
Q ss_pred HHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
||+.++||++++.+....+ ++.+ |++++++||+++ |.|.|+++++++.. .+.-...+.|+.....
T Consensus 165 ----~g~l~vVDavss~g~~~id-----v~~~---d~~~~ssqK~lg-P~Glg~l~~s~~~l-~~~~~~~~~~~~~~~~- 229 (360)
T PRK05355 165 ----GDVPLVADMSSDILSRPID-----VSKF---GLIYAGAQKNIG-PAGLTIVIVREDLL-GRALPSIPSMLDYKTH- 229 (360)
T ss_pred ----CCCcEEEEcCccccCccCC-----HHHc---cEEEEecccccc-CCceEEEEECHHHH-hhcccCCChHHHHHHH-
Confidence 8999999999886655443 2223 799999999986 99999999987543 2211111223221110
Q ss_pred CCCCCCcccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc--cc-cceeeecccC
Q psy9807 354 SAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV--LM-GLVCFRLKHW 428 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~--~~-~~v~f~~~~~ 428 (561)
.......++-. .....+..+++++-.+ |++++.+++.++++++++.|++++.+..+.++ .. .+
T Consensus 230 ----~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v-------- 297 (360)
T PRK05355 230 ----ADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMN-------- 297 (360)
T ss_pred ----HhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcE--------
Confidence 00001112222 2356777888888888 89999999999999999999998633332221 12 23
Q ss_pred ccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHh
Q psy9807 429 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRING 508 (561)
Q Consensus 429 ~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~ 508 (561)
++|++++. ....++.+.+.+
T Consensus 298 -----------------------------------------------------------~sf~~~~~-~~~~~~~~~~~~ 317 (360)
T PRK05355 298 -----------------------------------------------------------VPFTLADE-ELDKKFLAEAKA 317 (360)
T ss_pred -----------------------------------------------------------EEEEcCCh-HHHHHHHHHHHH
Confidence 44444332 223456677777
Q ss_pred CCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 509 NGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 509 ~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
.|.+...+. ...+.+|+|+.+ +++.+||++++++|+++..
T Consensus 318 ~Gi~~~~~~--~~~g~vRiS~~~-~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 318 AGLVGLKGH--RSVGGMRASIYN-AMPLEGVQALVDFMKEFER 357 (360)
T ss_pred CCCcccCCC--CccCcEEEECCC-CCCHHHHHHHHHHHHHHHH
Confidence 887652221 223589999765 6688899999999998654
No 64
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.83 E-value=9.5e-19 Score=180.41 Aligned_cols=305 Identities=11% Similarity=-0.032 Sum_probs=195.9
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEe-CChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc-eE
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQ-GTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN-LI 200 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t-~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~-~v 200 (561)
.+|.+.++-+++.+.++++||.|++ ...+|+ +|||+|+-.++...... +++ ++
T Consensus 31 r~~~f~~~~~~~~~~l~~l~~~~~~--------~~v~~~~gsgT~a~ea~~~nl~~~-----------------~~~~l~ 85 (349)
T TIGR01364 31 RSKEFEAVANEAESDLRELLNIPDN--------YEVLFLQGGATGQFAAVPLNLLAE-----------------GKVADY 85 (349)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCC--------ceEEEEcCCchHHHHHHHHhcCCC-----------------CCeEEE
Confidence 4667779999999999999998643 245666 44999986655542110 123 34
Q ss_pred Eeccc--chHHHHHHhccCCeEEeeC-CCC-ccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 201 ASPAC--TELEVVMLDWLGKMLDLPK-EFL-ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 201 v~~s~--~s~~kaa~~~g~~v~~v~~-~~g-~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
+..+. ..+.+.++..|. +..++. +.+ ..++.++++.... ..+.+|..++..|+||...| ++++
T Consensus 86 i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~th~ETstGv~~~-----~l~~ 152 (349)
T TIGR01364 86 IVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEIS-------EDAAYVHYCANETIHGVEFR-----ELPD 152 (349)
T ss_pred EECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCCC-------CCCCEEEEcCCCCcccEecc-----eecc
Confidence 44444 566667776677 666665 222 3333344422111 14678999999999999876 6777
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAP 356 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (561)
.+++.+.||++++.+....+ ++ ..|++++++||+++ |.|.|+++++++.. ...-...+.|.....
T Consensus 153 ~~~~l~iVDavss~g~~~id-----~~---~~d~~~~ssqK~lg-P~Glg~l~~s~~~~-~~~~~~~~~~~~~~~----- 217 (349)
T TIGR01364 153 VKNAPLVADMSSNILSRPID-----VS---KFGLIYAGAQKNIG-PAGLTVVIVRKDLL-GRASRITPSMLNYKI----- 217 (349)
T ss_pred cCCCeEEEEccccccCccCC-----HH---HccEEEEecccccC-CCceEEEEECHHHH-hhcccCCCCcchHHH-----
Confidence 88999999999886655443 12 23899999999986 99999999977533 221111122211000
Q ss_pred CCCcccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-c--cc-cceeeecccCcc
Q psy9807 357 DYRHWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-V--LM-GLVCFRLKHWQI 430 (561)
Q Consensus 357 ~~~~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~--~~-~~v~f~~~~~~~ 430 (561)
........++-. .....+..+++++-.+ |++++.+++..+++++++.|++++|+..... + .. .+++|
T Consensus 218 ~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf------- 290 (349)
T TIGR01364 218 HAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVF------- 290 (349)
T ss_pred HHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEE-------
Confidence 000001111222 2346677888888888 7999999999999999999999988755521 1 12 23344
Q ss_pred ccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCC
Q psy9807 431 PLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNG 510 (561)
Q Consensus 431 ~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g 510 (561)
.+++. .+..++.+.+.+.|
T Consensus 291 ------------------------------------------------------------~~~~~-~~~~~~~~~~~~~G 309 (349)
T TIGR01364 291 ------------------------------------------------------------TLGNE-ELEKRFLKEAEERG 309 (349)
T ss_pred ------------------------------------------------------------ecCCh-hHhHHHHHHHHHCC
Confidence 33322 22346667777888
Q ss_pred cEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 511 KIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 511 ~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
.+...+.. -.+++|+|+.+ +++++||++++++|+++.+
T Consensus 310 i~~~~~~~--~~g~vRvS~~~-~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 310 LVSLKGHR--SVGGMRASIYN-AMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred CcccCCcc--ccCeeEEECcC-CCCHHHHHHHHHHHHHHHH
Confidence 73322221 12489999765 6688899999999998654
No 65
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.83 E-value=8.6e-19 Score=181.90 Aligned_cols=312 Identities=12% Similarity=0.042 Sum_probs=198.8
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEe-CChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQ-GTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t-~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
..++.+.++.+++.+.+++++|.+++ ...+|+ +|||.++..++..... .+.++
T Consensus 34 hr~~~f~~~~~~~r~~l~~l~~~~~~--------~~v~f~~gs~T~a~~~~~~~l~~------------------~~~l~ 87 (361)
T TIGR01366 34 HRQAPVKNLVGRVREGLAELFSLPDG--------YEVILGNGGATAFWDAATFGLIE------------------KKSLH 87 (361)
T ss_pred cCChHHHHHHHHHHHHHHHHhCCCCC--------ceEEEECCchhHHHHHHHHhccc------------------ccccE
Confidence 47788899999999999999999753 246775 6699998766644210 01234
Q ss_pred Eeccc--chHHHHHHh--ccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 201 ASPAC--TELEVVMLD--WLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 201 v~~s~--~s~~kaa~~--~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+...+ ..+.+.+.+ +..++..++. ....++. .+.+ .+.+|++++++|.+|.+.|+++| +
T Consensus 88 i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~~--------~~~lV~~~h~et~tG~~~pi~~I---~ 151 (361)
T TIGR01366 88 LSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QADP--------GVDVIAWAHNETSTGVAVPVRRP---E 151 (361)
T ss_pred EecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccCC--------CCCEEEEcccCCccceecccccc---c
Confidence 54444 455555544 2336777776 3333322 2222 57789999999999999999998 5
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc--C----CCcccc
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV--D----PLYLKH 349 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~--~----~~yl~~ 349 (561)
|++|+.++||++++.+....+ ++.+|++++++|||++.|.|.++++++++.. .+.... . +.|+..
T Consensus 152 ~~~g~~~iVDavqs~g~~~id--------v~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~-~~~~~~~~~~~~~p~~~d~ 222 (361)
T TIGR01366 152 GSDDALVVIDATSGAGGLPVD--------IAETDVYYFAPQKNFASDGGLWLAIMSPAAL-ERIEAIAASGRWVPEFLSL 222 (361)
T ss_pred ccCCCeEEEEcCccccCCCCC--------HHHCCEEEEEchhhcCCCCceEEEEECHHHH-hhhhcccCCCCCCchhhhH
Confidence 899999999999887655443 2235999999999999998888877766532 221110 0 112211
Q ss_pred CCCCCCCCCCcccccCcCCc-chHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-ccccceeeecc
Q psy9807 350 DQQGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGVK-YLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCFRLK 426 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~~~v~f~~~ 426 (561)
... ..+........+-.. ..+.+-.+++++... |++.+.++..++++++++.+.+.+.++++.. +....
T Consensus 223 ~~~--~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s------ 294 (361)
T TIGR01366 223 PTA--VDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRS------ 294 (361)
T ss_pred HHH--HhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcc------
Confidence 000 000000011111111 123667788888777 6999999999999999999999976666532 11000
Q ss_pred cCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHH
Q psy9807 427 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRI 506 (561)
Q Consensus 427 ~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L 506 (561)
+..+++.| . .+....++.+.|
T Consensus 295 --------------------------------------------------------~~v~~v~~--~-~g~~~~~v~~~L 315 (361)
T TIGR01366 295 --------------------------------------------------------QVVGTIDF--V-DDIDAATVAKIL 315 (361)
T ss_pred --------------------------------------------------------cceEEEEC--C-CccCHHHHHHHH
Confidence 01112333 1 111235677888
Q ss_pred HhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 507 NGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 507 ~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.+.|.+...+...-+..++|+|+++ ++|++||++++++|+++.++
T Consensus 316 ~~~gI~i~~~~~~l~~~~vRis~~~-~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 316 RANGIVDTEPYRKLGRNQLRVAMFP-AIDPDDVEALTECVDWVVER 360 (361)
T ss_pred HHCCCeeccCccccCCCcEEEEcCC-CCCHHHHHHHHHHHHHHHhh
Confidence 7777665433211234589999886 66888999999999997665
No 66
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.83 E-value=3.6e-18 Score=176.39 Aligned_cols=316 Identities=11% Similarity=0.002 Sum_probs=203.4
Q ss_pred hhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy9807 112 DSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWK 191 (561)
Q Consensus 112 ~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~ 191 (561)
...+.+...+...+...++++.+.+++...+|.+.. ....++++|||+++..++.+....
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~-------~~~~~~~~~~t~a~~~~~~~~~~~------------- 82 (350)
T cd00609 23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVP-------PEEIVVTNGAQEALSLLLRALLNP------------- 82 (350)
T ss_pred HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------cceEEEecCcHHHHHHHHHHhCCC-------------
Confidence 445555566777778899999999999998886432 135788999999887766654211
Q ss_pred CcccccceEEeccc-chHHHHHHhccCCeEEeeC-CCCccCh--hhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC
Q psy9807 192 DSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EFLACSG--GKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC 267 (561)
Q Consensus 192 ~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~--~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp 267 (561)
++++++.... .++..+++..+.+++.+|. +++.++. +.++..+.. .+.+|+++..++.+|.+.|
T Consensus 83 ----g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~v~i~~~~~~tG~~~~ 150 (350)
T cd00609 83 ----GDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTP--------KTKLLYLNNPNNPTGAVLS 150 (350)
T ss_pred ----CCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCc--------cceEEEEECCCCCCCcccC
Confidence 1244444444 7788888888999999999 7777766 455544333 5778888889999999998
Q ss_pred HHHHH---HHHhhcCceEEechhcccccccCccccc-cccCccccceeeecCCcccc-ccccceeEEecChhhHHHhhcc
Q psy9807 268 LEEIG---QVCRQKDVWLHVDAAYAGSAFICPENRY-LMKGVELADSFNFNPHKWML-VTFDCSAMWLKDPSWVVNAFNV 342 (561)
Q Consensus 268 l~eI~---~ia~~~~~~lhVDaA~gg~~~~~~~~~~-~~~gi~~aDsi~~~~HK~l~-~P~g~g~l~~r~~~~l~~~~~~ 342 (561)
++++. ++|+++|+|++||+||+++......... ...+....|.+..++||+++ .+.++|++++++...... +..
T Consensus 151 ~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~-~~~ 229 (350)
T cd00609 151 EEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLER-LKK 229 (350)
T ss_pred HHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHH-HHH
Confidence 66665 8999999999999999875543221100 01112235888999999998 456788888766433332 221
Q ss_pred CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccccccee
Q psy9807 343 DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 422 (561)
Q Consensus 343 ~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~ 422 (561)
...+... .........++..++... ++++++.++..++++++.+.|++.+...+..+.....+.
T Consensus 230 ~~~~~~~---------------~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~ 293 (350)
T cd00609 230 LLPYTTS---------------GPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLW 293 (350)
T ss_pred HHHhccc---------------CCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEE
Confidence 1111000 011122233344444333 678888999999999999999988554432232333333
Q ss_pred eecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHH
Q psy9807 423 FRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKL 502 (561)
Q Consensus 423 f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l 502 (561)
+++ .+. ...+.+
T Consensus 294 ~~~-------------------------------------------------------------------~~~-~~~~~~ 305 (350)
T cd00609 294 LDL-------------------------------------------------------------------PEG-DDEEFL 305 (350)
T ss_pred Eec-------------------------------------------------------------------CCC-ChHHHH
Confidence 322 111 112345
Q ss_pred HHHHHhCCcEEEEeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHH
Q psy9807 503 LKRINGNGKIHLVPSKIR--DVYFLRMAVCSRYSESSDMIYSWNEIK 547 (561)
Q Consensus 503 ~~~L~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~~~l~ 547 (561)
.+.|.+.|.......... +..++|++++.+ ++|+++++++|+
T Consensus 306 ~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~~~~~al~ 349 (350)
T cd00609 306 ERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELEEALERLA 349 (350)
T ss_pred HHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHHHHHHHhh
Confidence 566666675544333332 567999998865 789999999885
No 67
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.83 E-value=1e-18 Score=180.29 Aligned_cols=242 Identities=15% Similarity=0.059 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
.-+++.+++++++| ++ ..++++|||++|..++.+.... ++.+++.... .+.
T Consensus 33 ~~~~l~~~~a~~~g-~~----------~~~~~~~gt~a~~~~~~~l~~~-----------------gd~v~~~~~~~~~~ 84 (338)
T cd06502 33 TTAKLEARAAELFG-KE----------AALFVPSGTAANQLALAAHTQP-----------------GGSVICHETAHIYT 84 (338)
T ss_pred HHHHHHHHHHHHhC-CC----------eEEEecCchHHHHHHHHHhcCC-----------------CCeEEEecCcceee
Confidence 34455567788888 43 5799999999988776553210 1233333222 333
Q ss_pred HH---HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhc-CCceEEEEEecCCCCCcc---ccCHHHHHHHHhhcCce
Q psy9807 209 EV---VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREM-CSDLLQVVATLGTTNCCA---FDCLEEIGQVCRQKDVW 281 (561)
Q Consensus 209 ~k---aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~-g~~p~~vv~t~gtt~tG~---idpl~eI~~ia~~~~~~ 281 (561)
.+ .+.+.|.+++.+|.+.+.+|+++|++++.+ .... ...+.+|+.+..++ +|. .+++++|+++|++||++
T Consensus 85 ~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~--~~~~~~~~~~~v~l~~p~n-~g~~~~~~~l~~i~~~~~~~~~~ 161 (338)
T cd06502 85 DEAGAPEFLSGVKLLPVPGENGKLTPEDLEAAIRP--RDDIHFPPPSLVSLENTTE-GGTVYPLDELKAISALAKENGLP 161 (338)
T ss_pred ecCCcHHHHcCceEEeecCCCCcCCHHHHHHHhhc--cCCCcCCcceEEEEEeecC-CccccCHHHHHHHHHHHHHcCCe
Confidence 33 245578899999984478999999999965 3211 12456666665444 464 57889999999999999
Q ss_pred EEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcc
Q psy9807 282 LHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHW 361 (561)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (561)
+|||+||..+....... ........+|+++.++|||++.|.| .+++.+++.+.........| +
T Consensus 162 livDea~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~~~~~~g--~~~~~~~~~~~~~~~~~~~~------~-------- 224 (338)
T cd06502 162 LHLDGARLANAAAALGV-ALKTYKSGVDSVSFCLSKGGGAPVG--AVVVGNRDFIARARRRRKQA------G-------- 224 (338)
T ss_pred EeechHHHHHHHHhcCC-CHHHHHhcCCEEEEeccccCCCccc--eEEECCHHHHHHHHHHHHHh------C--------
Confidence 99999985332211111 1111113469999999999998863 34444554443321111111 0
Q ss_pred cccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeee
Q psy9807 362 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 424 (561)
Q Consensus 362 ~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~ 424 (561)
.+.+..++..++++..+...++.+++++..++++++.+.|++. ++.+ .++..++++++
T Consensus 225 ---~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~v~ 282 (338)
T cd06502 225 ---GGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLE-SEVQTNIVLLD 282 (338)
T ss_pred ---CChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCc-ccccCCeEEEe
Confidence 0011223333445555554567778889999999999999987 4433 34455665553
No 68
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.83 E-value=1.6e-18 Score=181.77 Aligned_cols=327 Identities=10% Similarity=-0.034 Sum_probs=200.7
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHH-----HHHHH--------hcC
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKT-----MQRVK--------EAH 187 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~-----~~~~~--------~~~ 187 (561)
|.......++|..+++...++||.+. .-+=.-||+.||+.+..+..... +.+.+ +.+
T Consensus 87 y~g~~~~d~ie~l~~~ra~~lf~a~~----------anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~ 156 (493)
T PRK13580 87 YAGCQNVDTVEWEAAEHAKELFGAEH----------AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEED 156 (493)
T ss_pred cCCCchHHHHHHHHHHHHHHHhCCCc----------ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhh
Confidence 44556678999999999999999864 23556788999998887755321 00000 000
Q ss_pred C-CCCCcccccceEEeccc----chHHHHHHhcc--CCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecC
Q psy9807 188 P-DWKDSDIIANLIASPAC----TELEVVMLDWL--GKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLG 258 (561)
Q Consensus 188 ~-~~~~~~~~~~~vv~~s~----~s~~kaa~~~g--~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g 258 (561)
+ .++..-.++++....-. .+........+ .+++..++ +++.+|++++++.+.+ .+..|++++.
T Consensus 157 ~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~--------~~plvii~g~ 228 (493)
T PRK13580 157 WEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALARE--------FKPLILVAGY 228 (493)
T ss_pred hhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhh--------cCCEEEEeCc
Confidence 0 00000012333333111 11111111222 23444555 5689999999999977 3334555566
Q ss_pred CCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHH
Q psy9807 259 TTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVN 338 (561)
Q Consensus 259 tt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~ 338 (561)
++. |.+.|+++|+++|++||++++||+||+.+.+..............+|++++++||||++|.| |++++++. ...
T Consensus 229 S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~-l~~- 304 (493)
T PRK13580 229 SAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE-YAD- 304 (493)
T ss_pred ccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH-HHH-
Confidence 666 55779999999999999999999999987765333221112234679999999999988985 77777543 222
Q ss_pred hhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-cc
Q psy9807 339 AFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VL 417 (561)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~ 417 (561)
.+....+|+.... -.....+.-.+++......+.++.++..+++++|++.|.+. ||+++.. .+
T Consensus 305 ~L~~a~P~i~gg~---------------l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTd 368 (493)
T PRK13580 305 AVDKGCPLVLGGP---------------LPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTD 368 (493)
T ss_pred HHhhCCCcccCCC---------------ccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCC
Confidence 2222234543321 00111222223443333345678899999999999999987 8888642 34
Q ss_pred ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcH
Q psy9807 418 MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNE 497 (561)
Q Consensus 418 ~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~ 497 (561)
..+|...+. ...
T Consensus 369 shIV~V~lg--------------------------------------------------------------------~~~ 380 (493)
T PRK13580 369 NHLVLIDVT--------------------------------------------------------------------SFG 380 (493)
T ss_pred CCEEEEEeC--------------------------------------------------------------------CHH
Confidence 455444322 122
Q ss_pred HHH-HHHHHHHhCCcEEE---EeeeECC---EEEEEEEecCCCC---CHHHHHHHHHHHHHHHHHH
Q psy9807 498 INE-KLLKRINGNGKIHL---VPSKIRD---VYFLRMAVCSRYS---ESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 498 ~~~-~l~~~L~~~g~~~~---~~~~~~g---~~~lR~~~~~~~t---~~~di~~l~~~l~~~~~~~ 553 (561)
.+. .+.+.|.+.|++.. .|+++.+ ...||+++...++ +++||+++++.|.++.+..
T Consensus 381 ~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 381 LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 232 55668888875433 2666666 7789999665332 5889999999998887654
No 69
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.82 E-value=1.1e-17 Score=176.21 Aligned_cols=296 Identities=11% Similarity=-0.005 Sum_probs=182.3
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE 209 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ 209 (561)
..++.+.+++++|.+ ..++++|||+||..++.+. +. + ++.+++.... .++.
T Consensus 85 ~~~le~~ia~~~g~~-----------~~ii~~~~~~a~~~~~~~l----~~------~-------gd~vi~~~~~~~s~~ 136 (393)
T TIGR01822 85 HKELEAKIAAFLGTE-----------DTILYASCFDANGGLFETL----LG------A-------EDAIISDALNHASII 136 (393)
T ss_pred HHHHHHHHHHHhCCC-----------cEEEECchHHHHHHHHHHh----CC------C-------CCEEEEeccccHHHH
Confidence 344445667888764 3577889999987554432 10 0 1233333333 6666
Q ss_pred HHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 210 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 210 kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
.++++.+.+.+.++ .+|+++|++.|.+ ....+.++.+|+.....+.+|.+.|+++|+++|++||+|+++|++|+
T Consensus 137 ~~~~~~~~~~~~~~----~~d~~~l~~~i~~--~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~ 210 (393)
T TIGR01822 137 DGVRLCKAKRYRYA----NNDMADLEAQLKE--ARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHA 210 (393)
T ss_pred HHHHhcCCceEEeC----CCCHHHHHHHHHh--hhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCcc
Confidence 77777666665554 6899999999976 43333356778887788999999999999999999999999999996
Q ss_pred cccccCcccccc--ccCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 290 GSAFICPENRYL--MKGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 290 g~~~~~~~~~~~--~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
.+... +..... ..++ ..+|.++.++||+++++. .|+++. ++............|... .+
T Consensus 211 ~g~~~-~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r-~G~~~~-~~~~~~~l~~~~~~~~~~---------------~~ 272 (393)
T TIGR01822 211 TGFLG-PTGRGSHELCGVMGRVDIITGTLGKALGGAS-GGFTTA-RKEVVELLRQRSRPYLFS---------------NS 272 (393)
T ss_pred ccCcC-CCCCchHHhcCCCCCCeEEEEEChHHhhCCC-cEEEEe-CHHHHHHHHHhCccceec---------------CC
Confidence 44332 111110 1122 246999999999998654 476655 443333221111122111 11
Q ss_pred CCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHH
Q psy9807 367 RRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVL 445 (561)
Q Consensus 367 r~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~ 445 (561)
... ....+..+++.+ +..+++.++..++.+++.+.|++. |+++.. +..+++.+.
T Consensus 273 ~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~i~--------------------- 327 (393)
T TIGR01822 273 LPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIKP-ADHPIIPVM--------------------- 327 (393)
T ss_pred CCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEE---------------------
Confidence 111 111223333332 235667788889999999999875 776542 222332221
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee----eECC
Q psy9807 446 RLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS----KIRD 521 (561)
Q Consensus 446 ~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~g 521 (561)
.. ......++.+.|.++|. ++.+. ...+
T Consensus 328 ----------------------------------------------~~-~~~~~~~l~~~L~~~gI-~v~~~~~~~~~~~ 359 (393)
T TIGR01822 328 ----------------------------------------------LY-DAVLAQRFARRLLEEGI-YVTGFFYPVVPKG 359 (393)
T ss_pred ----------------------------------------------eC-CHHHHHHHHHHHHHCCe-eEeeeCCCCCCCC
Confidence 11 11224578888888874 44322 1234
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 522 VYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 522 ~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
...+|++++ ..++++||++++++|.++.++
T Consensus 360 ~~~iRis~~-~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 360 QARIRVQIS-AAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred CceEEEEEC-CCCCHHHHHHHHHHHHHHHHH
Confidence 557999966 466888999999999988654
No 70
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.82 E-value=1.2e-17 Score=174.92 Aligned_cols=300 Identities=10% Similarity=0.004 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHH--HHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKT--MQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~--~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
+.+++.+.+++++|.+. .+++++|+.||+.++.+.-... +... ..+ ...+..+++...
T Consensus 148 ~h~~LE~~LA~f~g~e~-----------all~sSGy~AN~~~i~aL~~~~~~~~~~--~~~-----~~~~~d~i~~D~~~ 209 (476)
T PLN02955 148 YHRLLESSLADLKKKED-----------CLVCPTGFAANMAAMVAIGSVASLLAAS--GKP-----LKNEKVAIFSDALN 209 (476)
T ss_pred HHHHHHHHHHHHHCCCc-----------EEEECChHHHHHHHHHHHhhcccccccc--ccc-----cCCCCcEEEEeccc
Confidence 44444456688888764 5899999999988876631100 0000 000 001233444443
Q ss_pred -chHHHHHHhc----cCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCc
Q psy9807 206 -TELEVVMLDW----LGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDV 280 (561)
Q Consensus 206 -~s~~kaa~~~----g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~ 280 (561)
.|+..++++. +.++..++ +.|+++|++.|++ ... ...+|+.....++.|.+.|+++|.++|++||+
T Consensus 210 HaSI~dG~~ls~~~~~a~~~~f~----HND~~~Le~~L~~--~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga 280 (476)
T PLN02955 210 HASIIDGVRLAERQGNVEVFVYR----HCDMYHLNSLLSS--CKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGF 280 (476)
T ss_pred hHHHHHHHHhccccCCceEEEeC----CCCHHHHHHHHHh--CCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCc
Confidence 8999999876 46777788 9999999999977 322 34578888889999999999999999999999
Q ss_pred eEEechhcccccccCcccccccc--Cc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCC
Q psy9807 281 WLHVDAAYAGSAFICPENRYLMK--GV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPD 357 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~--gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (561)
+++||.||+.+.+ .+..++... ++ ...|.++.++.|.++.. |.+++.+.............|++...
T Consensus 281 ~LiVDEAH~~Gv~-G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~---GGfi~gs~~~~~~l~~~~~~~ifSta------ 350 (476)
T PLN02955 281 LLVIDDAHGTFVC-GENGGGVAEEFNCEADVDLCVGTLSKAAGCH---GGFIACSKKWKQLIQSRGRSFIFSTA------ 350 (476)
T ss_pred EEEEcccccCcee-cCCCCcHHHHhCCCCCCcEEEEeCccchhcc---CceeecHHHHHHHHHHhCCCCeeccc------
Confidence 9999999985543 444444332 12 35689999999998743 44444444444333334445554321
Q ss_pred CCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccc
Q psy9807 358 YRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFR 437 (561)
Q Consensus 358 ~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~ 437 (561)
.....+...-.+++.+-. -..+.++++++.++|++.+ |+++ .++++..
T Consensus 351 --------lpp~~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI-------------- 398 (476)
T PLN02955 351 --------IPVPMAAAAYAAVVVARK--EKWRRKAIWERVKEFKALS----GVDI----SSPIISL-------------- 398 (476)
T ss_pred --------ccHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHhc----CCCC----CCCEEEE--------------
Confidence 000111112223333222 2346677888888888742 5543 2333222
Q ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEE---
Q psy9807 438 SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHL--- 514 (561)
Q Consensus 438 ~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~--- 514 (561)
.. +.+.....+.++|.+.|.+..
T Consensus 399 -----------------------------------------------------~i-g~~~~a~~~~~~L~~~Gi~v~~i~ 424 (476)
T PLN02955 399 -----------------------------------------------------VV-GNQEKALKASRYLLKSGFHVMAIR 424 (476)
T ss_pred -----------------------------------------------------Ee-CCHHHHHHHHHHHHHCCCEEEEEC
Confidence 11 334556678999999986554
Q ss_pred EeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 515 VPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 515 ~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.|+++.|...+|++++..| +++||++++++|.++...+
T Consensus 425 yPtVP~g~~rLRi~lsA~H-t~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 425 PPTVPPNSCRLRVTLSAAH-TTEDVKKLITALSSCLDFD 462 (476)
T ss_pred CCCCCCCCceEEEeeCCCC-CHHHHHHHHHHHHHHHhhh
Confidence 3788888899999988766 6779999999998876543
No 71
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.81 E-value=1.4e-17 Score=173.91 Aligned_cols=335 Identities=11% Similarity=0.011 Sum_probs=198.9
Q ss_pred CCCCCCccccccCCCCCChHHHHHHHHHhhcc--ccccccccChh----hHHHHHHHHHHHHHhcCCCccccccCCCCCC
Q psy9807 84 VTHWHSPKFHAYFPTANSYPAIVADILSDSIA--CIGFTWIASPA----CTELEVVMLDWLGKMLDLPKEFLACSGGKGG 157 (561)
Q Consensus 84 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n--~~~~~~~~sp~----~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~ 157 (561)
..++.+-.|+++-..++..++++. .+..... ++.+.+..+.. .+.+-+++.+.+++++|.+.
T Consensus 6 ~~~~~s~~YL~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~----------- 73 (370)
T PRK05937 6 SIDFVTNDFLGFSRSDTLVHEVEK-RYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE----------- 73 (370)
T ss_pred eEEeECCCccCCCCCHHHHHHHHH-HHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe-----------
Confidence 346778889999876655555443 3333321 11112223333 45677777888899999863
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHHHHhccCCeEEeeCCCCccChhhHH
Q psy9807 158 GVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVVMLDWLGKMLDLPKEFLACSGGKGG 235 (561)
Q Consensus 158 g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le 235 (561)
.++.++|+.+|+. +..+ +. . .++++++... .|+..++.......+.++ +.|+++|+
T Consensus 74 ~l~~~sG~~a~~~-~~~~---~~-~-------------~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~----~~d~~~l~ 131 (370)
T PRK05937 74 AFIVPSGYMANLG-LCAH---LS-S-------------VTDYVLWDEQVHISVVYSLSVISGWHQSFR----HNDLDHLE 131 (370)
T ss_pred EEEECChHHHHHH-HHHH---hC-C-------------CCCEEEEEhhhhHHHHHHHHHcCCceEEec----CCCHHHHH
Confidence 3777778888853 2221 10 0 1234555333 788877765444444444 78999999
Q ss_pred HHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccc--cCccccceeee
Q psy9807 236 GVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLM--KGVELADSFNF 313 (561)
Q Consensus 236 ~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~--~gi~~aDsi~~ 313 (561)
+.|++ ....+..+.+|+++..++++|.+.|+++|+++|+++|+++|||+||+.+.+. +..+... .+....+.+..
T Consensus 132 ~~l~~--~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g-~~g~g~~~~~~~~~~~~~~~ 208 (370)
T PRK05937 132 SLLES--CRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFG-DDGKGFCHSLGYENFYAVLV 208 (370)
T ss_pred HHHHh--hhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccC-CCCCchHHhhCCCCCcEEEE
Confidence 99976 3322224456777889999999999999999999999999999999854432 2222111 12222345677
Q ss_pred cCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHH
Q psy9807 314 NPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQ 393 (561)
Q Consensus 314 ~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~ 393 (561)
+++|+++ |.|+|+++.++. .........+|..... .-......+..+++.+-..+ +...++.
T Consensus 209 tlsK~~g-~~G~~vl~~~~~--~~~~~~~~~~~~~s~~--------------~~~~~~~a~~aal~~l~~~~-~~~~~~l 270 (370)
T PRK05937 209 TYSKALG-SMGAALLSSSEV--KQDLMLNSPPLRYSTG--------------LPPHLLISIQVAYDFLSQEG-ELARKQL 270 (370)
T ss_pred echhhhh-cCceEEEcCHHH--HHHHHHhCCCCeecCC--------------CCHHHHHHHHHHHHHHHhCc-HHHHHHH
Confidence 8889775 678887765431 1111111223321100 00122334445566554444 4456778
Q ss_pred HHHHHHHHHHHhcC-CCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhc
Q psy9807 394 ISLAKEFEQLVRSD-DRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVR 472 (561)
Q Consensus 394 ~~la~~l~~~l~~~-~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~ 472 (561)
.++.+++.+.+... ++. .+.|.
T Consensus 271 ~~l~~~l~~~l~~~~~~~---------~~~i~------------------------------------------------ 293 (370)
T PRK05937 271 FRLKEYFAQKFSSAAPGC---------VQPIF------------------------------------------------ 293 (370)
T ss_pred HHHHHHHHHhcCCCCCCC---------EEEEE------------------------------------------------
Confidence 88888888877542 110 11111
Q ss_pred cCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 473 SDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 473 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+.+. ....+.+.|.+.|. +++........++|+++. +++|++||++++++|.++.++
T Consensus 294 -------------------~~~~--~~~~~~~~L~~~gi-~v~~~~~~~~~~iRis~~-~~~t~edid~l~~~L~~~~~~ 350 (370)
T PRK05937 294 -------------------LPGI--SEQELYSKLVETGI-RVGVVCFPTGPFLRVNLH-AFNTEDEVDILVSVLATYLEK 350 (370)
T ss_pred -------------------eCCh--hHHHHHHHHHHCCe-eEEeeCCCCCCEEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Confidence 1111 13467778878875 444322223458999966 566889999999999988766
Q ss_pred H
Q psy9807 553 L 553 (561)
Q Consensus 553 ~ 553 (561)
+
T Consensus 351 ~ 351 (370)
T PRK05937 351 Y 351 (370)
T ss_pred h
Confidence 4
No 72
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.81 E-value=2e-17 Score=171.86 Aligned_cols=240 Identities=14% Similarity=0.063 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCc-ccccceEEeccc-
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDS-DIIANLIASPAC- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~-~~~~~~vv~~s~- 205 (561)
.++.+++.+++++++|.+ ..++|+|+|+|+..++.+.... ..+.... .+..+ ....++++...+
T Consensus 44 ~~~~~~~~~~~a~~~g~~-----------~~~~~~g~t~al~~al~al~~~-Gd~~~~~--~~~~s~~~~~eVi~~~~~~ 109 (363)
T TIGR01437 44 KELVNKTGEYIANLLGVE-----------DAVIVSSASAGIAQSVAAVITR-GNRYLVE--NLHDSKIEVNEVVLPKGHN 109 (363)
T ss_pred HHHHHHHHHHHHHhhCCC-----------eEEEEcCHHHHHHHHHHHHhcC-CCcchhh--cccccccccceEEEECccc
Confidence 467788888999999975 3599999999999888775321 0000000 00000 012245554433
Q ss_pred c----hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEE-EecCCCCCccccCHHHHHHHHhhcCc
Q psy9807 206 T----ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVV-ATLGTTNCCAFDCLEEIGQVCRQKDV 280 (561)
Q Consensus 206 ~----s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv-~t~gtt~tG~idpl~eI~~ia~~~~~ 280 (561)
. ++..++.+.|++++.++. ++.+|+++++++|.+ ++.+++ ++...+.+|.+.|+++|+++|++||+
T Consensus 110 ~~~~~~~~~~~~~~g~~~v~v~~-~~~~d~~~le~ai~~--------~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi 180 (363)
T TIGR01437 110 VDYGAPVETMVRLGGGKVVEAGY-ANECSAEQLEAAITE--------KTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNL 180 (363)
T ss_pred hhcCCchHHHHHhcCCeEEEEcC-CCCCCHHHHHHhcCh--------hceEEEEEecCCCCcCCcCCHHHHHHHHHHcCC
Confidence 2 445566788989888886 456999999999977 344444 44445678999999999999999999
Q ss_pred eEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCc
Q psy9807 281 WLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRH 360 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (561)
++++|+||+.. ..... .. .+|++++++||||++|. .|+++. ++..+..... +.... + ..+
T Consensus 181 ~vivD~a~~~~------~~~~~-~~-g~D~~~~S~~K~l~gp~-~G~l~~-~~~~i~~~~~----~~~~~--~--~~~-- 240 (363)
T TIGR01437 181 PLIVDAAAEED------LQKYY-RL-GADLVIYSGAKAIEGPT-SGLVLG-KKKYIEWVKL----QSKGI--G--RAM-- 240 (363)
T ss_pred eEEEECCCCCc------hHHHH-Hc-CCCEEEEeCCcccCCCc-eEEEEE-cHHHHHHHHh----ccCCC--c--cee--
Confidence 99999999721 11100 11 35999999999999998 777765 4333332111 00000 0 000
Q ss_pred ccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 361 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 361 ~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
+... ...+.+..++..+-..+.+ .++...+.++++.+.|.++||++++.+
T Consensus 241 ---~~~~-~~~~gl~aAl~~~~~~~~~-~~~~~~~~~~~l~~~L~~i~g~~~~~~ 290 (363)
T TIGR01437 241 ---KVGK-ENILGLTAALEQYLSTGKE-SGAEMVAKLTPFIEALNTLKGVSASIV 290 (363)
T ss_pred ---ccCH-HHHHHHHHHHHHHHccCcc-cHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 0000 1235555666655433332 233334456689999999999998754
No 73
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.81 E-value=2.5e-17 Score=170.62 Aligned_cols=296 Identities=10% Similarity=-0.077 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
....+++.+.+++++|.+ ..+++++||++|+.++.+.... ++.+++.... .
T Consensus 45 ~~~~~~l~~~la~~~~~~-----------~~iv~~sg~~a~~~~~~~~~~~-----------------gd~Vl~~~~~~~ 96 (349)
T cd06454 45 SDLHEELEEELAEFHGKE-----------AALVFSSGYAANDGVLSTLAGK-----------------GDLIISDSLNHA 96 (349)
T ss_pred chHHHHHHHHHHHHhCCC-----------CEEEeccHHHHHHHHHHHhcCC-----------------CCEEEEehhhhH
Confidence 344555666778888875 3478888899988766543211 1244444333 6
Q ss_pred hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech
Q psy9807 207 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 207 s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa 286 (561)
++..++...|.+++.++ .+|++.+++.+++ .. ...++.+|+.+...+.+|.+.|+++|+++|++||+++++|+
T Consensus 97 ~~~~~~~~~g~~~~~~~----~~~~~~le~~i~~--~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~ 169 (349)
T cd06454 97 SIIDGIRLSGAKKRIFK----HNDMEDLEKLLRE--AR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDE 169 (349)
T ss_pred HHHHHHHHcCCceEEec----CCCHHHHHHHHHH--hh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEc
Confidence 66667777888888887 5688899998876 32 12356788888888999999999999999999999999999
Q ss_pred hcccccccCccccc--ccc-CccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccc
Q psy9807 287 AYAGSAFICPENRY--LMK-GVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQI 363 (561)
Q Consensus 287 A~gg~~~~~~~~~~--~~~-gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (561)
+|+.+... +.... ... ....+|+++.++||+++.+. |+++. ++..+.........|..
T Consensus 170 a~~~g~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g--G~i~~-~~~~~~~~~~~~~~~~~--------------- 230 (349)
T cd06454 170 AHSVGVYG-PHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG--GYIAG-SKELIDYLRSYARGFIF--------------- 230 (349)
T ss_pred cccccccC-CCCCChhhhccccccCcEEEeechhhhcccC--CEEEC-CHHHHHHHHHhchhhhc---------------
Confidence 99743321 11110 011 12346999999999998632 54444 44433322221111110
Q ss_pred cCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHH
Q psy9807 364 PLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLW 442 (561)
Q Consensus 364 ~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w 442 (561)
..+.. .....+..+++.+.. +.++.++..++++++.+.|.+. ++++..++...+.++
T Consensus 231 ~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~------------------- 288 (349)
T cd06454 231 STSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPL------------------- 288 (349)
T ss_pred cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEE-------------------
Confidence 00111 122233344444322 4567788889999999999886 676654432222222
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeee---E
Q psy9807 443 FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSK---I 519 (561)
Q Consensus 443 ~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~ 519 (561)
... ......++.+.|.++|........ .
T Consensus 289 ------------------------------------------------~~~-~~~~~~~~~~~L~~~gI~~~~~~~~~~~ 319 (349)
T cd06454 289 ------------------------------------------------IGD-DPAKAVAFSDALLERGIYVQAIRYPTVP 319 (349)
T ss_pred ------------------------------------------------eCC-ChHHHHHHHHHHHhCCceEEEecCCccC
Confidence 111 112245788888888755433211 1
Q ss_pred CCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 520 RDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 520 ~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
.+..++|+++. .+++++|+++++++|+++
T Consensus 320 ~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 320 RGTARLRISLS-AAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCCCeEEEEEe-CCCCHHHHHHHHHHHHHh
Confidence 23468999975 556889999999999875
No 74
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.81 E-value=1.2e-17 Score=173.25 Aligned_cols=239 Identities=14% Similarity=0.076 Sum_probs=149.1
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
..+|...++|+. +++++|.+ ..++++|||+|+..++.+.+.. + ++.+++
T Consensus 15 ~~~~~~~~~~~~----la~~~~~~-----------~~~~~~sgt~al~~~l~~l~~~---------~-------gd~vl~ 63 (352)
T cd00616 15 TLGPKVREFEKA----FAEYLGVK-----------YAVAVSSGTAALHLALRALGIG---------P-------GDEVIV 63 (352)
T ss_pred cCCHHHHHHHHH----HHHHhCCC-----------eEEEECCHHHHHHHHHHHcCCC---------C-------CCEEEe
Confidence 456666677764 56667754 3689999999988777654210 0 123444
Q ss_pred eccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 202 SPAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 202 ~~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
.... .+...++...|.+++.+++ . ++.+|+++|++.+.+ .+.+|+.+. .+|.+.|+++|.++|+++
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~---~~G~~~~~~~i~~l~~~~ 132 (352)
T cd00616 64 PSFTFVATANAILLLGATPVFVDIDPDTYNIDPELIEAAITP--------RTKAIIPVH---LYGNPADMDAIMAIAKRH 132 (352)
T ss_pred CCcchHHHHHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCc--------CCeEEEEEC---CCCCcCCHHHHHHHHHHc
Confidence 3333 6667777778899999998 4 789999999998865 455666543 579999999999999999
Q ss_pred CceEEechhcccccccCccccccccCccccceeeec--CCccccccccceeEEecChhhHHHhhcc-CCCccccCCCCCC
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFN--PHKWMLVTFDCSAMWLKDPSWVVNAFNV-DPLYLKHDQQGSA 355 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~--~HK~l~~P~g~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~ 355 (561)
|+++++|+||+.+...... . +.. ..|..+++ .|||+..+. .|++++++.......... ...+... .
T Consensus 133 ~i~li~D~a~~~g~~~~~~--~-~~~--~~d~~~~S~~~~K~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~-----~ 201 (352)
T cd00616 133 GLPVIEDAAQALGATYKGR--K-VGT--FGDAGAFSFHPTKNLTTGE-GGAVVTNDEELAERARLLRNHGRDRD-----R 201 (352)
T ss_pred CCeEEEECCCCCCCeECCE--E-ccc--CcceeEEcCCCCCCCcccC-ceEEEECCHHHHHHHHHHHHcCCCCC-----C
Confidence 9999999999854433211 0 111 13555665 559995443 456666665443321110 0011000 0
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
..+........-+...+..+ +.....++++++.++..++++++++.|+++|+++++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~aa--~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~ 259 (352)
T cd00616 202 FKYEHEILGYNYRLSEIQAA--IGLAQLEKLDEIIARRREIAERYKELLADLPGIRLPDV 259 (352)
T ss_pred CccccceeeeccCcCHHHHH--HHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCC
Confidence 00011111111122223222 22234566788889999999999999999999998754
No 75
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=1.9e-17 Score=175.11 Aligned_cols=241 Identities=10% Similarity=-0.008 Sum_probs=146.5
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
.|...++|+-+.+.+++++|.+. .-++++|||.||+.++.+.... + ..|+..
T Consensus 69 ~~~~~~lE~~~~~~la~l~g~~~----------alv~~~SG~~A~~~~l~al~~~-----------------G-D~Vl~~ 120 (416)
T PRK13034 69 CEFVDEVEALAIERAKQLFGCDY----------ANVQPHSGSQANGAVYLALLKP-----------------G-DTILGM 120 (416)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCc----------eEEecCCcHHHHHHHHHHhcCC-----------------C-CEEEEc
Confidence 57788999988888999999863 1245789999999887663110 1 223333
Q ss_pred cc--ch-HHHHHHh--ccCCe--EEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH
Q psy9807 204 AC--TE-LEVVMLD--WLGKM--LDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 204 s~--~s-~~kaa~~--~g~~v--~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
+. .+ +..+++. .+..+ +.++. ..+.+|+++|++.+.. . .|.+|+.+ .+.+|..-|+++|.++
T Consensus 121 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~-----~~klVi~~--~~~~g~~~dl~~l~~l 191 (416)
T PRK13034 121 SLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKE--H-----KPKLIIAG--FSAYPRELDFARFREI 191 (416)
T ss_pred CccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhh--c-----CCeEEEEC--CCccccccCHHHHHHH
Confidence 32 33 2223322 12222 23333 3567999999998855 2 35556543 3456788899999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
|++||++++||+||+.+....+.... .+..+|.++.++|||+.+|.| |+++..+...... ... ++...
T Consensus 192 a~~~g~~livD~Aha~G~~~~g~~~~---~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~-~~~---~~~~~---- 259 (416)
T PRK13034 192 ADEVGALLMVDMAHIAGLVAAGEHPN---PFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKK-INS---AVFPG---- 259 (416)
T ss_pred HHHcCCEEEEeCcccccCcccCCCCC---CCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHH-HHh---hcCCc----
Confidence 99999999999999876655432211 224579999999999988886 5555544432221 111 11110
Q ss_pred CCCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-cccccee
Q psy9807 355 APDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVC 422 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~~~v~ 422 (561)
+..+..+ ...++..++...-..+..++.++.++++++|++.|++. |+++..+ .+++++.
T Consensus 260 --------~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~ 320 (416)
T PRK13034 260 --------LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLL 320 (416)
T ss_pred --------ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEE
Confidence 0001111 11112222222212244566789999999999999988 9998753 3444433
No 76
>KOG2862|consensus
Probab=99.80 E-value=2.5e-17 Score=157.29 Aligned_cols=340 Identities=13% Similarity=0.076 Sum_probs=228.7
Q ss_pred cCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHH
Q psy9807 95 YFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLG 174 (561)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ 174 (561)
+.|+|...+ +-+..++|.++..+ .||.+.+|..++.+-+...|...... --+|.++|+.+.-.|+..
T Consensus 21 ~gPGPsnl~----~~V~~A~~~~~lgh-~sPe~~qIm~~v~egikyVFkT~n~~--------tf~isgsGh~g~E~al~N 87 (385)
T KOG2862|consen 21 LGPGPSNLS----GRVQEAMSRPSLGH-MSPEFVQIMDEVLEGIKYVFKTANAQ--------TFVISGSGHSGWEAALVN 87 (385)
T ss_pred ecCCCcCCC----HHHHHhhcCCcccc-CCHHHHHHHHHHHHHHHHHhccCCCc--------eEEEecCCcchHHHHHHh
Confidence 455554444 44455567666555 89999999999999999998776431 237788888877665554
Q ss_pred HHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCce
Q psy9807 175 AKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDL 250 (561)
Q Consensus 175 ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p 250 (561)
... . ++++++.... ..+...++..|++|..|+. ......++.++++|.+ . +|
T Consensus 88 ~le--------P---------gd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsq--h-----~p 143 (385)
T KOG2862|consen 88 LLE--------P---------GDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQ--H-----KP 143 (385)
T ss_pred hcC--------C---------CCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHh--c-----CC
Confidence 221 1 2344444443 3344455778999999988 7778999999999987 2 78
Q ss_pred EEEEEecCCCCCccccC-HHHHHHHHhhcCceEEechh--cccccccCccccccccCccccceeeecCCcccccccccee
Q psy9807 251 LQVVATLGTTNCCAFDC-LEEIGQVCRQKDVWLHVDAA--YAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSA 327 (561)
Q Consensus 251 ~~vv~t~gtt~tG~idp-l~eI~~ia~~~~~~lhVDaA--~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~ 327 (561)
.+|.+++|.|+||..+| ++.+.++||+|+..+.||+. .||.-+..+++ |+ |......+|.|++|.|.+.
T Consensus 144 ~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDew-----gV---DvaytgSQKaL~aP~GLsi 215 (385)
T KOG2862|consen 144 KAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEW-----GV---DVAYTGSQKALGAPAGLSI 215 (385)
T ss_pred ceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhh-----cc---cEEEecchhhcCCCCCcce
Confidence 99999999999999999 77788999999999999964 55544444433 45 9999999999999999999
Q ss_pred EEecChhhHHHhhc-cC--CC-ccccCCCC------CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy9807 328 MWLKDPSWVVNAFN-VD--PL-YLKHDQQG------SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLA 397 (561)
Q Consensus 328 l~~r~~~~l~~~~~-~~--~~-yl~~~~~~------~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la 397 (561)
+.+.++.. .+... .. .. |+....-+ +.+.+.++++... -...+-.+|..+-.+|+++.++++.+++
T Consensus 216 isfS~ka~-~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~---lly~Lr~AL~~I~eeGL~~~~~rH~e~s 291 (385)
T KOG2862|consen 216 ISFSDKAL-EAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQ---LLYSLRAALALIAEEGLENSWRRHREMS 291 (385)
T ss_pred eecCHHHH-HHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88766532 22111 11 12 22111100 0111111111100 1234556778888999999999999999
Q ss_pred HHHHHHHhcCCCeEEecc-c--cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccC
Q psy9807 398 KEFEQLVRSDDRFEVIYE-V--LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 474 (561)
Q Consensus 398 ~~l~~~l~~~~g~~l~~~-~--~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~ 474 (561)
++++..|++. |+++... + ..+.|.
T Consensus 292 ~~l~~~l~~~-GLq~fv~~e~~rlptvt---------------------------------------------------- 318 (385)
T KOG2862|consen 292 KWLKLSLEAL-GLQLFVVDEELRLPTVT---------------------------------------------------- 318 (385)
T ss_pred HHHHHHHHHh-CccceecChhhccCcce----------------------------------------------------
Confidence 9999999998 8887542 1 122211
Q ss_pred chhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEe-eeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 475 DRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVP-SKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 475 ~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
.|...+ ...-.++..++..++.+.+++ -..-...++|+.++..+.+.+-|+..++.|....+
T Consensus 319 ------------tv~vp~---gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq 381 (385)
T KOG2862|consen 319 ------------TVKVPY---GVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQ 381 (385)
T ss_pred ------------eeecCC---CCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHh
Confidence 111111 111346778888886666543 23334559999999999999999999988876543
No 77
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.80 E-value=3.8e-17 Score=172.68 Aligned_cols=295 Identities=12% Similarity=-0.010 Sum_probs=181.4
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc-c-chHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA-C-TELE 209 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s-~-~s~~ 209 (561)
.++.+.+++++|.+ ..+++++|++||..++.+++... .+.+++... . .++.
T Consensus 93 ~~Le~~la~~~g~~-----------~~l~~~sG~~an~~ai~~l~~~~----------------~~~~v~~~~~~h~s~~ 145 (402)
T TIGR01821 93 VELEAELADLHGKE-----------SALVFTSGYVANDATLATLAKII----------------PGCVIFSDELNHASMI 145 (402)
T ss_pred HHHHHHHHHHhCCC-----------eEEEECchHHHHHHHHHHhhCCC----------------CCCEEEEcchHhHHHH
Confidence 34444557777754 35888899999998887754210 012333332 2 6666
Q ss_pred HHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 210 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 210 kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
.++...+..+..++ ..|+++|++.++. .. ...+.+|+.+...+.+|.+.|+++|.++|++||++++||+||+
T Consensus 146 ~~~~~~g~~~~~~~----~~d~~~l~~~l~~--~~--~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~ 217 (402)
T TIGR01821 146 EGIRHSGAEKFIFR----HNDVAHLEKLLQS--VD--PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHA 217 (402)
T ss_pred HHHHHcCCeEEEEC----CCCHHHHHHHHHh--cc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccc
Confidence 66666777766665 5688999988865 21 1246788889999999999999999999999999999999998
Q ss_pred cccccCccccccc--cCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 290 GSAFICPENRYLM--KGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 290 g~~~~~~~~~~~~--~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
.+. +.+...... .++ ...|.+..++.|.++.+. |++. .++............|... .+
T Consensus 218 ~G~-~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~i~-~~~~~~~~l~~~~~~~~~t---------------~~ 278 (402)
T TIGR01821 218 VGL-YGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG--GYIA-ASRKLIDAIRSYAPGFIFT---------------TS 278 (402)
T ss_pred ccc-cCCCCCccchhccCCCCCeEEEEechhhhccCC--ceee-cCHHHHHHHHHhCcCceec---------------Cc
Confidence 432 223222211 122 235888889999998644 4443 3443332221112222111 01
Q ss_pred CC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHH
Q psy9807 367 RR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVL 445 (561)
Q Consensus 367 r~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~ 445 (561)
-. ..+..+..+++.+... .++.++..++++++.+.|++. |++++.+ ..+++.+.+
T Consensus 279 ~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~i~~i~~-------------------- 334 (402)
T TIGR01821 279 LPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVIPN-PSHIVPVII-------------------- 334 (402)
T ss_pred CCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcCCC-CCCEEEEEe--------------------
Confidence 11 1122223344433222 445556678999999999886 7765533 344433311
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEe----eeECC
Q psy9807 446 RLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVP----SKIRD 521 (561)
Q Consensus 446 ~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~g 521 (561)
+......++.++|.++..+++.+ +...+
T Consensus 335 ------------------------------------------------~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g 366 (402)
T TIGR01821 335 ------------------------------------------------GDAALCKKVSDLLLNKHGIYVQPINYPTVPRG 366 (402)
T ss_pred ------------------------------------------------CCHHHHHHHHHHHHhcCCEEEEeECCCCCCCC
Confidence 11123456888887653355443 33456
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 522 VYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 522 ~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
..++|++++. ..+++||++++++|+++.+++
T Consensus 367 ~~~lRis~~~-~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 367 TERLRITPTP-AHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CceEEEEeCC-CCCHHHHHHHHHHHHHHHHHc
Confidence 6789999775 457889999999999887653
No 78
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=2.5e-17 Score=175.73 Aligned_cols=260 Identities=10% Similarity=-0.044 Sum_probs=161.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
......++|+.+.+...++|+.....+. .-+=+.+||.||+.++.+.... ++++++.
T Consensus 74 G~~~~d~lE~~~~~~~~~~f~~~~~~~~------~nv~~~SG~~AN~av~~aL~~p-----------------gD~Il~~ 130 (475)
T PLN03226 74 GNEYIDQIETLCQKRALEAFRLDPEKWG------VNVQPLSGSPANFAVYTALLQP-----------------HDRIMGL 130 (475)
T ss_pred CChhHHHHHHHHHHHHHHHhCCCcceeE------EecCcCchHHHHHHHHHHhCCC-----------------CCEEEEC
Confidence 3446789999999999999998754110 0011488999998877764211 1233331
Q ss_pred c-------ccchHHHHHHhccCCeE----EeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHH
Q psy9807 203 P-------ACTELEVVMLDWLGKML----DLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLE 269 (561)
Q Consensus 203 ~-------s~~s~~kaa~~~g~~v~----~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~ 269 (561)
. ++.+...++++....+. ..+. +++.+|+++|++.+.+ . +|.+|++ +.+.+|..-|++
T Consensus 131 d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~--~-----~pklIv~--~~S~~s~~~D~a 201 (475)
T PLN03226 131 DLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAML--F-----RPKLIIA--GASAYPRDWDYA 201 (475)
T ss_pred CCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhh--c-----CCeEEEE--ecCcCCCccCHH
Confidence 1 11233333333333222 2233 5789999999999875 2 4555554 345678888999
Q ss_pred HHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCcccc
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
+|+++|++||++++||+||+.+.+..+..... ++.+|++++++||||++|.| |++++++. ...........|...
T Consensus 202 ~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p---~~~~Div~~t~hK~L~GP~G-g~I~~~~~-~~~~~~~g~~~~~d~ 276 (475)
T PLN03226 202 RMRKIADKVGALLMCDMAHISGLVAAQEAASP---FEYCDVVTTTTHKSLRGPRG-GMIFFRKG-PKPPKGQGEGAVYDY 276 (475)
T ss_pred HHHHHHHHcCCEEEEEchhhhCcccCCCCCCC---CCCCeEEEecCcccccCCCc-eEEEEchh-hcccccCCCccHHHH
Confidence 99999999999999999999877655432222 23579999999999999998 77777553 111100000000000
Q ss_pred CCCCCCCC-CCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-ccccceee
Q psy9807 350 DQQGSAPD-YRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCF 423 (561)
Q Consensus 350 ~~~~~~~~-~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~~~v~f 423 (561)
.. ..+ ......+++-. ..+.++..+++.+-..+++++.++..+++++|++.|.+. |++++.+ .+..++.+
T Consensus 277 ~~---~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv 349 (475)
T PLN03226 277 ED---KINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGGTDNHLVLW 349 (475)
T ss_pred HH---HhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEE
Confidence 00 000 00001122211 234556677777777778888999999999999999985 9999864 23344444
No 79
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.79 E-value=4.8e-17 Score=172.24 Aligned_cols=299 Identities=11% Similarity=-0.020 Sum_probs=184.2
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
.+...++|+ .+++++|.+ ..+++++|++||..++..++... .+.+++..
T Consensus 90 ~~~~~~l~~----~la~~~g~~-----------~~~~~~sG~~an~~ai~~l~~~~----------------~~~~i~~~ 138 (407)
T PRK09064 90 NHYHVELER----ELADLHGKE-----------AALVFTSGYVSNDATLSTLAKLI----------------PDCVIFSD 138 (407)
T ss_pred HHHHHHHHH----HHHHHhCCC-----------cEEEECcHHHHHHHHHHHHhCCC----------------CCCEEEEe
Confidence 344455555 556677754 34788889999998887654210 01233333
Q ss_pred cc--chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCce
Q psy9807 204 AC--TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVW 281 (561)
Q Consensus 204 s~--~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~ 281 (561)
.. .++..++...+.++..++ ..|+++|++.++. .. ...+.+|+.+...+.+|.+.|+++|.++|++||++
T Consensus 139 ~~~h~s~~~~~~~~~~~~~~~~----~~d~~~le~~l~~--~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~ 210 (407)
T PRK09064 139 ELNHASMIEGIRRSRCEKHIFR----HNDVAHLEELLAA--AD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNAL 210 (407)
T ss_pred CcchHHHHHHHHHcCCcEEEEC----CCCHHHHHHHHHh--cc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCE
Confidence 22 666667777777776666 4688999998864 21 12467888888999999999999999999999999
Q ss_pred EEechhcccccccCccccccc--cCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCC
Q psy9807 282 LHVDAAYAGSAFICPENRYLM--KGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDY 358 (561)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~--~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (561)
++||+||+.+. +.+...... .++ +..|.++.+++|.++.+. |++.. ++..+........+|...
T Consensus 211 livDEa~~~G~-~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~~~~-~~~~~~~l~~~~~~~~~t--------- 277 (407)
T PRK09064 211 TYLDEVHAVGM-YGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG--GYIAG-SAALVDAVRSYAPGFIFT--------- 277 (407)
T ss_pred EEEECCCcccc-cCCCCCChHHhcCCCCCCeEEEEecchhhhccC--ceEec-CHHHHHHHHHhCcccccc---------
Confidence 99999997332 223222211 122 345888889999997543 54444 444333221212222111
Q ss_pred CcccccCcC-CcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccc
Q psy9807 359 RHWQIPLGR-RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFR 437 (561)
Q Consensus 359 ~~~~~~~sr-~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~ 437 (561)
.+. ...+..+..+++.+... ....++..++.+++.+.|++. |++++.+ ..+++.+.+
T Consensus 278 ------~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~iv~i~~------------ 335 (407)
T PRK09064 278 ------TSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAA-GIPVMPN-ESHIVPVMV------------ 335 (407)
T ss_pred ------CcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCCCC-CCCEEEEEe------------
Confidence 111 11223334455544332 334577888999999999986 7776542 334433321
Q ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEe-
Q psy9807 438 SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVP- 516 (561)
Q Consensus 438 ~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~- 516 (561)
+......++.++|.++..+++.+
T Consensus 336 --------------------------------------------------------~~~~~~~~l~~~L~~~~gi~v~~~ 359 (407)
T PRK09064 336 --------------------------------------------------------GDPEKCKKASDMLLEEHGIYVQPI 359 (407)
T ss_pred --------------------------------------------------------CCHHHHHHHHHHHHHhCCEEEeeE
Confidence 11123456788887653344433
Q ss_pred ---eeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 517 ---SKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 517 ---~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+...+..++|+++.. .++++|+++++++|+++.+++
T Consensus 360 ~~p~~~~~~~~lRis~~~-~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 360 NYPTVPRGTERLRITPTP-FHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred CCCCCCCCCceEEEEeCC-CCCHHHHHHHHHHHHHHHHHc
Confidence 233455789999765 557889999999999887654
No 80
>PLN02483 serine palmitoyltransferase
Probab=99.79 E-value=9.9e-17 Score=172.59 Aligned_cols=343 Identities=11% Similarity=0.026 Sum_probs=202.2
Q ss_pred CCCCCCccccccCCCCCChHHHHHHHHHhh-cccccc--ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE
Q psy9807 84 VTHWHSPKFHAYFPTANSYPAIVADILSDS-IACIGF--TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI 160 (561)
Q Consensus 84 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~--~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~ 160 (561)
..++.+..|+|+....+..+..+.+.+... .+..+. .+...+...++|+ .+++++|.++ .++
T Consensus 102 ~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~----~lA~~~g~~~-----------ai~ 166 (489)
T PLN02483 102 CLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEE----LVARFVGKPA-----------AIV 166 (489)
T ss_pred EEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHH----HHHHHhCCCc-----------EEE
Confidence 346788889998843333333344444433 221111 1333445555555 5577777553 477
Q ss_pred eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHHHHhccCCeEEeeCCCCccChhhHHHHH
Q psy9807 161 QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI 238 (561)
Q Consensus 161 t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i 238 (561)
.++|+.+|+.++.+... + + ..+++... .|+..+++..|++++.+| +.|+++|++.|
T Consensus 167 ~~~G~~an~~~i~al~~----------~-------G-d~Vi~d~~~h~s~~~~~~~~Ga~v~~~~----~~d~~~le~~l 224 (489)
T PLN02483 167 FGMGYATNSTIIPALIG----------K-------G-GLIISDSLNHNSIVNGARGSGATIRVFQ----HNTPSHLEEVL 224 (489)
T ss_pred ECCHHHHHHHHHHHhCC----------C-------C-CEEEEcchhhHHHHHHHHHcCCeEEEEe----CCCHHHHHHHH
Confidence 77788888755544211 0 1 23343333 788888889999999999 55788888887
Q ss_pred hhhchhhcC-------CceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccc--cCc--cc
Q psy9807 239 QRKSDREMC-------SDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLM--KGV--EL 307 (561)
Q Consensus 239 ~~~~~~~~g-------~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~--~gi--~~ 307 (561)
++ ....+ ....+|++....+++|.+.|+++|+++|++||+++++|.||+.+.. .+..+... .++ ..
T Consensus 225 ~~--~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~-G~~G~g~~~~~~v~~~~ 301 (489)
T PLN02483 225 RE--QIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV-GKTGRGVCELLGVDPAD 301 (489)
T ss_pred Hh--hhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc-CCCCCchHHhcCCCccc
Confidence 65 32111 1123556666668899999999999999999999999999974332 22221111 122 24
Q ss_pred cceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh----H
Q psy9807 308 ADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG----V 383 (561)
Q Consensus 308 aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g----~ 383 (561)
.|.++.+++|+++.+ | |.+ +.++..+.........+..... .-...+..+-.+++.+- .
T Consensus 302 ~dI~~~SfSKs~g~~-G-G~i-~~~~~li~~l~~~~~~~~~~~~--------------~~p~~~~~~~aaL~~l~~~~g~ 364 (489)
T PLN02483 302 VDIMMGTFTKSFGSC-G-GYI-AGSKELIQYLKRTCPAHLYATS--------------MSPPAVQQVISAIKVILGEDGT 364 (489)
T ss_pred CcEEEEecchhcccC-c-eEE-EcCHHHHHHHHHhCccccccCC--------------cCHHHHHHHHHHHHHHHhCccc
Confidence 599999999999753 2 544 4455444332222222211100 00011111223343321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHH
Q psy9807 384 KYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISL 463 (561)
Q Consensus 384 ~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~ 463 (561)
+...+++++..++.+++.+.|+++ |+++..+....++.+.+
T Consensus 365 ~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l-------------------------------------- 405 (489)
T PLN02483 365 NRGAQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIML-------------------------------------- 405 (489)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEE--------------------------------------
Confidence 234556788889999999999998 88776544333332211
Q ss_pred HHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEE---eeeECCEEEEEEEecCCCCCHHHHH
Q psy9807 464 AKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLV---PSKIRDVYFLRMAVCSRYSESSDMI 540 (561)
Q Consensus 464 a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~~~~g~~~lR~~~~~~~t~~~di~ 540 (561)
+ ......++.+.|.++|...+. ++...+...+|++++..+ +++||+
T Consensus 406 --------------------------~----~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~-t~edId 454 (489)
T PLN02483 406 --------------------------Y----NPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASH-SREDLI 454 (489)
T ss_pred --------------------------C----CHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCC-CHHHHH
Confidence 0 011123677788888765553 122234468999977655 678999
Q ss_pred HHHHHHHHHHHHH
Q psy9807 541 YSWNEIKTLTEEL 553 (561)
Q Consensus 541 ~l~~~l~~~~~~~ 553 (561)
++++.|.++.+.+
T Consensus 455 ~~l~~L~~~~~~~ 467 (489)
T PLN02483 455 KALEVISEVGDLV 467 (489)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987654
No 81
>PLN02822 serine palmitoyltransferase
Probab=99.79 E-value=1.9e-16 Score=170.14 Aligned_cols=310 Identities=12% Similarity=0.065 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
.....++.+.+++++|.++ .++.++|..+|..++.+. .. .++++++...
T Consensus 153 ~~~~~~Lee~La~~~~~~~-----------~i~~s~G~~a~~sai~a~----~~--------------~gd~Ii~d~~~H 203 (481)
T PLN02822 153 IDVHLDCETKIAKFLGTPD-----------SILYSYGLSTIFSVIPAF----CK--------------KGDIIVADEGVH 203 (481)
T ss_pred HHHHHHHHHHHHHHhCCCC-----------EEEECCHHHHHHHHHHHh----CC--------------CCCEEEEeCCcc
Confidence 3445555556677777653 244445555665544432 11 1234444333
Q ss_pred chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcC---Cce-EEEEEecCCCCCccccCHHHHHHHHhhcCce
Q psy9807 206 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMC---SDL-LQVVATLGTTNCCAFDCLEEIGQVCRQKDVW 281 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g---~~p-~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~ 281 (561)
+++..++.+.+.+++.++ +.|.++|+..+++ ..... ..+ .+|++....+++|.+-|+++|+++|++||++
T Consensus 204 ~s~~~~~~ls~~~~~~~~----~nd~~~l~~~l~~--~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~ 277 (481)
T PLN02822 204 WGIQNGLYLSRSTIVYFK----HNDMESLRNTLEK--LTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFR 277 (481)
T ss_pred HHHHHHHHHcCCeEEEEC----CCCHHHHHHHHHH--HhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCE
Confidence 788888888888998888 5577888888765 32221 123 6788888888899999999999999999999
Q ss_pred EEechhcccccccCcccccccc--Cc--cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCC
Q psy9807 282 LHVDAAYAGSAFICPENRYLMK--GV--ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPD 357 (561)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~--gi--~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (561)
+++|.+|+.+ .+.+..+...+ ++ ...|.++.+++|.++.+. |++ +.+...+.........|.+..
T Consensus 278 LIvDEa~s~g-vlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G--G~i-~g~~~ii~~~~~~~~~~~fsa------- 346 (481)
T PLN02822 278 VLLDESNSFG-VLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG--GFC-TGSARVVDHQRLSSSGYVFSA------- 346 (481)
T ss_pred EEEECCcccc-ccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC--eEE-EcCHHHHHHHHhcCCceeecc-------
Confidence 9999999833 33333332221 23 256999999999997433 444 445544433222222232211
Q ss_pred CCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCcccccccc
Q psy9807 358 YRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRF 436 (561)
Q Consensus 358 ~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~ 436 (561)
+ ..+....+++..+. .+...++.++..++.++|++.|++.+|+++..++...++.+++++.. +
T Consensus 347 --------~--lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~---~--- 410 (481)
T PLN02822 347 --------S--LPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKST---G--- 410 (481)
T ss_pred --------c--cCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCc---c---
Confidence 1 11222222333321 12235788889999999999999988888876666666666553210 0
Q ss_pred chhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHH-hCCcEEEE
Q psy9807 437 RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRIN-GNGKIHLV 515 (561)
Q Consensus 437 ~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~ 515 (561)
. ..+......++.++|. +.| +++.
T Consensus 411 ----------------------------------------------------~--~~~~~~~~~~~~~~Ll~e~G-V~v~ 435 (481)
T PLN02822 411 ----------------------------------------------------S--AKEDLSLLEHIADRMLKEDS-VLVV 435 (481)
T ss_pred ----------------------------------------------------c--ccchHHHHHHHHHHHHhcCC-EEEE
Confidence 0 0011223457888887 556 4444
Q ss_pred eeeE------CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 516 PSKI------RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 516 ~~~~------~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
+... .+...+|++++..+ +++||+++++.|+++..++++
T Consensus 436 ~~~~~~~~~~~~~~~lRi~is~~~-t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 436 VSKRSTLDKCRLPVGIRLFVSAGH-TESDILKASESLKRVAASVLK 480 (481)
T ss_pred eeCCCCcCCCCCCCcEEEEECCCC-CHHHHHHHHHHHHHHHHHHhc
Confidence 3211 12347999977544 888999999999998887653
No 82
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.79 E-value=2.3e-17 Score=174.48 Aligned_cols=246 Identities=11% Similarity=-0.007 Sum_probs=148.3
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..+...++|+.+.+++++++|.+.. .++++|||+|+..++.+... + ++++++.
T Consensus 59 ~~~~~~~l~~~~~~~~~~~~g~~~~----------~v~~~sgt~a~~~~l~~l~~----------~-------Gd~Vl~~ 111 (402)
T cd00378 59 GCEYVDEIEDLAIERAKKLFGAEYA----------NVQPHSGSQANLAVYFALLE----------P-------GDTIMGL 111 (402)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCce----------eeecCCcHHHHHHHHHHhcC----------C-------CCEEEEe
Confidence 4555677888889999999998742 35555789998876665321 0 2344444
Q ss_pred cccc----hHHH--HHHhccCCeEEeeC--C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHH
Q psy9807 203 PACT----ELEV--VMLDWLGKMLDLPK--E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIG 272 (561)
Q Consensus 203 ~s~~----s~~k--aa~~~g~~v~~v~~--~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~ 272 (561)
...+ +... .+...|.++..++. + ++.+|++++++++.+ . ++.+|+.+.. .+|...|+++|+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~--~-----~~~~v~~~~~--~~~~~~~~~~I~ 182 (402)
T cd00378 112 DLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE--F-----KPKLIVAGAS--AYPRPIDFKRFR 182 (402)
T ss_pred cCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh--C-----CCCEEEecCc--ccCCCcCHHHHH
Confidence 3331 1111 13445666666665 3 689999999999864 2 3555554332 457778999999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQ 352 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 352 (561)
++|++||+++++|++|..+..........+. .+|+++.++|||+.+|.+ |+++..+.............+...
T Consensus 183 ~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~---~~dv~~~s~sK~l~G~~g-g~i~~~~~~~~~~l~~~~~~~~~~--- 255 (402)
T cd00378 183 EIADEVGAYLLVDMAHVAGLVAGGVFPNPLP---GADVVTTTTHKTLRGPRG-GLILTRKGELAKKINSAVFPGLQG--- 255 (402)
T ss_pred HHHHhcCCEEEEEccchhhhhhcccCCCccc---CCcEEEeccccCCCCCCc-eEEEeccHHHHHHHHHHhCccccC---
Confidence 9999999999999998544432211111122 359999999999977765 444444433333221111111100
Q ss_pred CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-cccccceeee
Q psy9807 353 GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY-EVLMGLVCFR 424 (561)
Q Consensus 353 ~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~-~~~~~~v~f~ 424 (561)
.+.......+..++......++.++.++..++++++.+.|.+. |++++. +...+.+.++
T Consensus 256 ------------~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~ 315 (402)
T cd00378 256 ------------GPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVD 315 (402)
T ss_pred ------------CchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEe
Confidence 0000111122223333333366778888999999999999987 888864 3344444443
No 83
>KOG0630|consensus
Probab=99.79 E-value=1.6e-17 Score=166.51 Aligned_cols=401 Identities=17% Similarity=0.217 Sum_probs=266.5
Q ss_pred hhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccc----ccceEE
Q psy9807 126 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDI----IANLIA 201 (561)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~----~~~~vv 201 (561)
.+.-+.-.+..|+..+|.+.+...++++. ...|...-..++.-++..|... ++ ++....++++ ....++
T Consensus 162 ian~i~Gdanh~fgnLF~FAdsqiycsdP--aasfhadiadai~haVkLAika---r~--~~dhs~eG~~afaa~aaPt~ 234 (838)
T KOG0630|consen 162 IANSISGDANHVFGNLFHFADSQIYCSDP--AASFHADIADAIGHAVKLAIKA---RC--GGDHSLEGGIAFAALAAPTF 234 (838)
T ss_pred HHHhhccchHHHHHHHHhhcccccccCCc--hhhhhhhhhhHHHHHHHhhhhh---cc--CCccccccccchHhhcCceE
Confidence 44556667889999999987754443322 1222222122222222222211 11 1111112222 235688
Q ss_pred eccc----chHHHHHHhccCC---eEEeeC-C----CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHH
Q psy9807 202 SPAC----TELEVVMLDWLGK---MLDLPK-E----FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLE 269 (561)
Q Consensus 202 ~~s~----~s~~kaa~~~g~~---v~~v~~-~----~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~ 269 (561)
|.|. --..-+|+-.|+. +..++- + .|+||...+++.|++ |.++|++|.++++..|++..|..|.|-
T Consensus 235 YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiide--DlaagkkPLilia~iGasi~GqnDmi~ 312 (838)
T KOG0630|consen 235 YISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDE--DLAAGKKPLILIADIGASICGQNDMIL 312 (838)
T ss_pred EEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHH--HHhCCCCCeEEEEeccchhhcchHHHH
Confidence 8888 3344466666653 333333 2 369999999999999 999999999999999999999999999
Q ss_pred HHHHHHhhcC-ceEEechhcccccccCccccccccC-ccccceeeecCCccccccccceeEEecChhhH-HHhhccCCCc
Q psy9807 270 EIGQVCRQKD-VWLHVDAAYAGSAFICPENRYLMKG-VELADSFNFNPHKWMLVTFDCSAMWLKDPSWV-VNAFNVDPLY 346 (561)
Q Consensus 270 eI~~ia~~~~-~~lhVDaA~gg~~~~~~~~~~~~~g-i~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l-~~~~~~~~~y 346 (561)
+|.++|++|+ +|+|.-| |+..++.+.+.....-. .+..||++.+.--||+.|..--+++-|.-.-. ..+|..++
T Consensus 313 kildi~eahakfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~aaSafesdp-- 389 (838)
T KOG0630|consen 313 KILDICEAHAKFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGSAASAFESDP-- 389 (838)
T ss_pred HHHHHHHHhhheeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccccccchhcccCh--
Confidence 9999999998 9999987 44444544432222222 24569999999999999987777776653211 11111111
Q ss_pred cccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc---------
Q psy9807 347 LKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL--------- 417 (561)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~--------- 417 (561)
-..|+.+++++|.+++++|...+.++++....+...+.+.+.++++++++....
T Consensus 390 -----------------i~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig~dn~aelaarl~ 452 (838)
T KOG0630|consen 390 -----------------ILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIGHDNGAELAARLS 452 (838)
T ss_pred -----------------HHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEeccCCHHHHHHHHh
Confidence 235678999999999999999999999999999999999999999999875211
Q ss_pred ----------------ccceeeecccC-cccc----------------------------ccccchhhHHHHH-------
Q psy9807 418 ----------------MGLVCFRLKHW-QIPL----------------------------GRRFRSLKLWFVL------- 445 (561)
Q Consensus 418 ----------------~~~v~f~~~~~-~~~~----------------------------~~~~~~~k~w~~~------- 445 (561)
.+.|.+.+.+. .+++ ...++-+..|+..
T Consensus 453 dn~~sPfdvqalfdaaaPtVai~~~~~tsIk~a~q~hkaaaaaaddedA~aiaeke~~deaeY~D~LNaWL~d~Llpd~~ 532 (838)
T KOG0630|consen 453 DNIFSPFDVQALFDAAAPTVAIFFDGSTSIKLAGQGHKAAAAAADDEDAEAIAEKEKIDEAEYFDRLNAWLGDGLLPDCL 532 (838)
T ss_pred hccCCcchHhhhhcccCCeEEEEecCceeeeccccccHHHHhhccccchhhcchhhhcchHHHHHHHHHHHhcccccCCC
Confidence 02333322221 1211 1224556666641
Q ss_pred --------------------------------------HHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhh---
Q psy9807 446 --------------------------------------RLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL--- 484 (561)
Q Consensus 446 --------------------------------------~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~--- 484 (561)
.....+++-+.++.++.....|.++..-.+.+.++.-|+
T Consensus 533 ~f~fdtIE~~gn~GiafRfCPLEhgaae~pphidhlerFaqkLea~m~IleaTi~hKakF~eLkd~~~sL~LlPi~eWAG 612 (838)
T KOG0630|consen 533 NFDFDTIEHGGNHGIAFRFCPLEHGAAEQPPHIDHLERFAQKLEAHMDILEATIKHKAKFIELKDCFDSLRLLPIPEWAG 612 (838)
T ss_pred CCCceeeecCCccceeEEecccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccceEEeecccccc
Confidence 111123344567788889999999999999888877766
Q ss_pred hcceeeec----CC------------CcHHHHHHHHHHHhCCcEEEEee-eECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q psy9807 485 MGLVCFRL----KG------------PNEINEKLLKRINGNGKIHLVPS-KIRDVYFLRMAVCSRYSESSDMIYSWNEIK 547 (561)
Q Consensus 485 ~~~v~f~~----~~------------~~~~~~~l~~~L~~~g~~~~~~~-~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 547 (561)
+|.|||-. ++ .+.+|-++.+.|......|..+. +..|..|+||.+. +++.|++.+++.+.
T Consensus 613 iGaV~fiPsivkE~~~e~~nDiaKqeinhLNidLVeaLKStDaAFS~Gd~Tr~Gl~CVkFGMl---sd~kdleeLldlVa 689 (838)
T KOG0630|consen 613 IGAVCFIPSIVKEGNEEDLNDIAKQEINHLNIDLVEALKSTDAAFSLGDCTRDGLICVKFGML---SDEKDLEELLDLVA 689 (838)
T ss_pred ccceEecccccccCCHhHhhHHHHHHHhhccHHHHHHHhhhhhhcccCCccccceeEEEeccc---cchhhHHHHHHHHH
Confidence 57788865 11 24456677777776666665543 3378889999844 47789999999999
Q ss_pred HHHHHHHHHHh
Q psy9807 548 TLTEELLKEEK 558 (561)
Q Consensus 548 ~~~~~~~~~~~ 558 (561)
+.+++++++++
T Consensus 690 qkGKeieenqq 700 (838)
T KOG0630|consen 690 QKGKEIEENQQ 700 (838)
T ss_pred HhchhhhhHHH
Confidence 99998877665
No 84
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.77 E-value=1e-16 Score=170.16 Aligned_cols=234 Identities=11% Similarity=0.031 Sum_probs=145.7
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
.+...++|+.+++++++++|.+.. -+++++||+|+..++.+... + ++++++..
T Consensus 66 ~~~~~~~e~~~~~~la~~~g~~~~----------~i~~~sgt~al~~~l~~l~~----------~-------gd~Vl~~~ 118 (416)
T PRK00011 66 CEYVDVVEQLAIDRAKELFGAEYA----------NVQPHSGSQANAAVYFALLK----------P-------GDTILGMD 118 (416)
T ss_pred chHHHHHHHHHHHHHHHHhCCCce----------eeecCCchHHHHHHHHHhcC----------C-------CCEEEEec
Confidence 345667888889999999999753 25556689988766554311 0 22344433
Q ss_pred ccc-hH---HHHHH--hccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 204 ACT-EL---EVVML--DWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 204 s~~-s~---~kaa~--~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
..+ +. ..... ..|.+++.++. +++.+|+++|++.+.+ . .|.+|+.+ .+.+|...|+++|+++|
T Consensus 119 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~--~-----~~k~v~~~--~~~~~~~~~~~~I~~la 189 (416)
T PRK00011 119 LAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALE--H-----KPKLIIAG--ASAYSRPIDFKRFREIA 189 (416)
T ss_pred cccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHh--c-----CCCEEEEC--CCcCCCccCHHHHHHHH
Confidence 332 11 11111 22456777777 4589999999999965 2 34455543 34567778999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
++||+++++|+||+.+..........+. .+|.++.++|||+.+|.| |+++..++............+...
T Consensus 190 ~~~~~~livD~a~~~g~~~~g~~~~~~~---~~di~~~S~~K~l~g~~g-g~i~~~~~~~~~~l~~~~~~~~~~------ 259 (416)
T PRK00011 190 DEVGAYLMVDMAHIAGLVAAGVHPSPVP---HADVVTTTTHKTLRGPRG-GLILTNDEELAKKINSAVFPGIQG------ 259 (416)
T ss_pred HHcCCEEEEECcchhcccccCccCCCCC---CCcEEEecCCcCCCCCCc-eEEEeCCHHHHHHHHHHhCccccC------
Confidence 9999999999998754432211111122 459999999999977765 455554443333221111111100
Q ss_pred CCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 356 PDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 356 ~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
+... ....++.++.....+++++++++..++++++++.|++. |+++..
T Consensus 260 ----------~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 308 (416)
T PRK00011 260 ----------GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVS 308 (416)
T ss_pred ----------CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeee
Confidence 0001 12233444444445678889999999999999999986 787763
No 85
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.76 E-value=5.5e-16 Score=164.28 Aligned_cols=294 Identities=10% Similarity=-0.023 Sum_probs=179.3
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc-c-chHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA-C-TELEV 210 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s-~-~s~~k 210 (561)
++.+.+++++|.+ ..+++++||+||..++.+.... . .+..++... . .++..
T Consensus 95 ~Le~~la~~~g~~-----------~~i~~~sG~~a~~~~i~~l~~~--------~--------~g~~vi~~~~~h~s~~~ 147 (410)
T PRK13392 95 LLERELADLHGKE-----------SALLFTSGYVSNDAALSTLGKL--------L--------PGCVILSDALNHASMIE 147 (410)
T ss_pred HHHHHHHHHhCCC-----------CEEEECcHHHHHHHHHHHHhcC--------C--------CCCEEEEehhhhHHHHH
Confidence 3444567788864 3588888899998877643110 0 012333322 2 66667
Q ss_pred HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhccc
Q psy9807 211 VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAG 290 (561)
Q Consensus 211 aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg 290 (561)
++...|.++..++ ..|.+.+++.++. .. ...+.+|+++...+.+|.+-|+++|.++|++||++++||+||+.
T Consensus 148 ~~~~~g~~~~~~~----~~d~~~l~~~l~~--~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~ 219 (410)
T PRK13392 148 GIRRSGAEKQVFR----HNDLADLEEQLAS--VD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAV 219 (410)
T ss_pred HHHHcCCeEEEEe----CCCHHHHHHHHHh--cc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccc
Confidence 7777888877766 3366778877765 21 12567888999999999999999999999999999999999984
Q ss_pred ccccCccccccc--cC-ccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcC
Q psy9807 291 SAFICPENRYLM--KG-VELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGR 367 (561)
Q Consensus 291 ~~~~~~~~~~~~--~g-i~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr 367 (561)
+.+ .+...... .+ .+..|.++.+++|+++.+. |++. .+............+|.... +.
T Consensus 220 g~~-g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~-~~~~~~~~l~~~~~~~~~s~---------------~~ 280 (410)
T PRK13392 220 GLY-GARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIA-ASADLIDFVRSFAPGFIFTT---------------AL 280 (410)
T ss_pred cCc-CCCCCchhhhccCCCCCcEEEEEChHhhhccc--chhh-cCHHHHHHHHHhCcchhccC---------------cC
Confidence 332 22222211 11 2345888899999998754 4443 34444433222222332110 00
Q ss_pred C-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHH
Q psy9807 368 R-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLR 446 (561)
Q Consensus 368 ~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~ 446 (561)
. .....+..+++.+.. ..+..++..++.+++.+.|++. |+++.. +..+++.+.+
T Consensus 281 ~~~~~~a~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~i~~--------------------- 335 (410)
T PRK13392 281 PPAVAAGATAAIRHLKT--SQTERDAHQDRVAALKAKLNAN-GIPVMP-SPSHIVPVMV--------------------- 335 (410)
T ss_pred CHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEe---------------------
Confidence 1 112223344443322 2344566788889999999886 777653 3444432211
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEe----eeECCE
Q psy9807 447 LLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVP----SKIRDV 522 (561)
Q Consensus 447 ~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~g~ 522 (561)
+.+....++.++|.++..+++.+ +...+.
T Consensus 336 -----------------------------------------------~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~ 368 (410)
T PRK13392 336 -----------------------------------------------GDPTLCKAISDRLMSEHGIYIQPINYPTVPRGT 368 (410)
T ss_pred -----------------------------------------------CCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCC
Confidence 11122457888887543344443 233456
Q ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 523 YFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 523 ~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.++|++++..+ +++|+++++++|+++.+++
T Consensus 369 ~~lRis~~~~~-t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 369 ERLRITPTPLH-DDEDIDALVAALVAIWDRL 398 (410)
T ss_pred ceEEEEECCCC-CHHHHHHHHHHHHHHHHHc
Confidence 79999977655 7789999999999886653
No 86
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.75 E-value=6.4e-16 Score=163.54 Aligned_cols=297 Identities=9% Similarity=-0.024 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc-c-ch
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA-C-TE 207 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s-~-~s 207 (561)
...++.+.+++++|.+ ..+|+++|++||..++.+..... .+++++... . .+
T Consensus 91 ~~~~le~~la~~~g~~-----------~~~~~~SG~~An~~ai~~l~~~~----------------~g~~I~~~~~~H~s 143 (406)
T PRK13393 91 YHVLLEAELADLHGKE-----------AALLFTSGYVSNWAALSTLGSRL----------------PGCVILSDELNHAS 143 (406)
T ss_pred HHHHHHHHHHHHhCCC-----------cEEEeCCcHHHHHHHHHHhhcCC----------------CCCEEEEccchhHH
Confidence 3444455667777764 35888888999998887421110 013333332 2 67
Q ss_pred HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechh
Q psy9807 208 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAA 287 (561)
Q Consensus 208 ~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA 287 (561)
+..+++..+.+++.+| ..|+++|++.++. .. ...+.+|+.+...+.+|.+.|+++|.++|++||++++||+|
T Consensus 144 ~~~~~~~~g~~~~~~~----~~d~~~l~~~l~~--~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea 215 (406)
T PRK13393 144 MIEGIRHSRAEKRIFR----HNDPADLERKLSD--LD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEV 215 (406)
T ss_pred HHHHHHHcCCeEEEeC----CCCHHHHHHHHHh--cc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECC
Confidence 7777777777777777 5688899988865 21 12456788888999999999999999999999999999999
Q ss_pred cccccccCccccccc--cCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccccc
Q psy9807 288 YAGSAFICPENRYLM--KGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIP 364 (561)
Q Consensus 288 ~gg~~~~~~~~~~~~--~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (561)
|+.+.+ .+...... .++ +..|.+..++.|.++.+. |++ +.++............|...
T Consensus 216 ~~~g~~-g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G--G~~-~~~~~~~~~l~~~~~~~~~t--------------- 276 (406)
T PRK13393 216 HAVGLY-GPRGGGIAEREGLADRLTIIEGTLAKAFGVMG--GYI-TGSAALCDFIRSFASGFIFT--------------- 276 (406)
T ss_pred cccccc-CCCCCchhhhcCCCCCCeEEEEeCchhhcccC--cee-eCCHHHHHHHHHhCcCceec---------------
Confidence 984332 23222211 122 234788889999998643 444 33443332221222222111
Q ss_pred CcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHH
Q psy9807 365 LGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWF 443 (561)
Q Consensus 365 ~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~ 443 (561)
.+.. ..+..+..+++.+...+ ....+..++.+++.+.|++. +++++. +..+++.+
T Consensus 277 ~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~i~~v-------------------- 332 (406)
T PRK13393 277 TSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKA-GIPHLP-NPSHIVPV-------------------- 332 (406)
T ss_pred CccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHc-CCCcCC-CCCCeEEE--------------------
Confidence 1111 12233445555443322 22355678889999999876 666542 23333322
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC-CcEEEE---eeeE
Q psy9807 444 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN-GKIHLV---PSKI 519 (561)
Q Consensus 444 ~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~---~~~~ 519 (561)
.. +......++.++|.++ |.+... ++.+
T Consensus 333 -----------------------------------------------~~-~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p 364 (406)
T PRK13393 333 -----------------------------------------------MV-GDPVLCKQISDELLDRYGIYVQPINYPTVP 364 (406)
T ss_pred -----------------------------------------------Ee-CCHHHHHHHHHHHHHhCCEEEEeECCCCCC
Confidence 11 1112345788888875 644322 2444
Q ss_pred CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 520 RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 520 ~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.|..++|+++.. .++++|+++++++|+++.+++
T Consensus 365 ~g~~~iRis~~~-~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 365 RGTERLRITPSP-LHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CCCceEEEEECC-CCCHHHHHHHHHHHHHHHHhc
Confidence 566789999664 558889999999999887653
No 87
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.75 E-value=4.3e-16 Score=154.07 Aligned_cols=324 Identities=11% Similarity=0.046 Sum_probs=217.4
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+...++...++|...+ .++-+.+.+|.++..++... ..+.+|++| .+.++..+.+.+...
T Consensus 43 i~~Al~~rvdhGvfGY~~~~--~~~~~ai~~w~~~r~~~~i~-------~e~i~~~p~----VVpgi~~~I~~~T~~--- 106 (388)
T COG1168 43 IIEALRERVDHGVFGYPYGS--DELYAAIAHWFKQRHQWEIK-------PEWIVFVPG----VVPGISLAIRALTKP--- 106 (388)
T ss_pred HHHHHHHHHhcCCCCCCCCC--HHHHHHHHHHHHHhcCCCCC-------cceEEEcCc----chHhHHHHHHHhCcC---
Confidence 44566777777777776444 56899999999999998753 124455554 567777766654321
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC--CC--CccChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK--EF--LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~--~~--g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
++.+++.+.. +++.++....|.+++..|. ++ +.||.++||+++.+ . .+.+.+.+..-+
T Consensus 107 ----------gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~--~-----~vkl~iLCnPHN 169 (388)
T COG1168 107 ----------GDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD--E-----RVKLFILCNPHN 169 (388)
T ss_pred ----------CCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc--C-----CccEEEEeCCCC
Confidence 3456777777 8899999999999999998 44 46799999999977 2 344555555566
Q ss_pred CCccc---cCHHHHHHHHhhcCceEEechhcccccccCccccc---cccCccccceeeecCCccccccc-cceeEEecCh
Q psy9807 261 NCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRY---LMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 261 ~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~---~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
.+|.+ +.|.+|+++|++||+.++.|.-|+=..+....+-. +-.....--..+.++.|.++.+. .|+.+++.++
T Consensus 170 P~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~ 249 (388)
T COG1168 170 PTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNR 249 (388)
T ss_pred CCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCH
Confidence 66665 79999999999999999999887643332211110 00111111345667799999774 5667777665
Q ss_pred hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHHhc-CCCe
Q psy9807 334 SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLR--LLGVKYLQEYIRKQISLAKEFEQLVRS-DDRF 410 (561)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~--~~g~~g~~~~~~~~~~la~~l~~~l~~-~~g~ 410 (561)
.. +..+...-..... -...++++-++.. ..|...+.+++++..++.+++.+.+.+ +|++
T Consensus 250 ~l-r~~~~~~l~~~~~-----------------~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v 311 (388)
T COG1168 250 EL-RAKFLKRLKRNGL-----------------HGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGV 311 (388)
T ss_pred HH-HHHHHHHHHHhcC-----------------CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 43 2222111111000 0123444433333 448999999999999999999999998 7999
Q ss_pred EEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 411 EVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 411 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
++..|..+.+ +|+++|.+|.+
T Consensus 312 ~v~~p~gTYL--------------------~WLD~r~l~l~--------------------------------------- 332 (388)
T COG1168 312 KVTEPQGTYL--------------------AWLDCRELGLD--------------------------------------- 332 (388)
T ss_pred EEecCCCcee--------------------eeeeccccCCC---------------------------------------
Confidence 9998888877 45555555554
Q ss_pred ecCCCcHHHHHHHHHHHhCCcEEEEee---eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRINGNGKIHLVPS---KIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
..++.+.|+++.++.+++. ...|.+++|+.+.+++ +-+++.++.|....
T Consensus 333 --------d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr---~~L~eal~ri~~al 384 (388)
T COG1168 333 --------DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPR---AILEEALERLKRAL 384 (388)
T ss_pred --------hHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCH---HHHHHHHHHHHHHH
Confidence 2367888888888887643 3356789999877655 56666666666544
No 88
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.74 E-value=1.1e-15 Score=160.42 Aligned_cols=292 Identities=13% Similarity=0.044 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE 207 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s 207 (561)
.+..++.+.+++++|.+ ..+++++|+++++.++.+. .. + ++.+++.... .+
T Consensus 84 ~~~~~l~~~la~~~~~~-----------~~i~~~~g~~~~~~~l~~~----~~------~-------gd~V~~~~~~~~~ 135 (385)
T PRK05958 84 PAHEALEEELAEWFGAE-----------RALLFSSGYAANLAVLTAL----AG------K-------GDLIVSDKLNHAS 135 (385)
T ss_pred HHHHHHHHHHHHHhCCC-----------cEEEECcHHHHHHHHHHHh----CC------C-------CCEEEEeCccCHH
Confidence 34566677778888753 4588888999887655332 10 0 1234433333 66
Q ss_pred HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechh
Q psy9807 208 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAA 287 (561)
Q Consensus 208 ~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA 287 (561)
...++.+.|.+++.+| ..|++.+++.++. .. ..+.+++.....+.+|.+.|+++|+++|++||+|+++|++
T Consensus 136 ~~~~~~~~g~~~~~~~----~~d~~~l~~~i~~--~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~ 206 (385)
T PRK05958 136 LIDGARLSRARVRRYP----HNDVDALEALLAK--WR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEA 206 (385)
T ss_pred HHHHHHhcCCceEEeC----CCCHHHHHHHHHh--cc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECc
Confidence 6667777888888887 4588999998865 21 1245666666778899999999999999999999999999
Q ss_pred cccccccCccccccc--cCcc-c-cceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccc
Q psy9807 288 YAGSAFICPENRYLM--KGVE-L-ADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQI 363 (561)
Q Consensus 288 ~gg~~~~~~~~~~~~--~gi~-~-aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (561)
|+.+.+. +...... .++. . -+.+..++||+++. .| |.++. ++............|...
T Consensus 207 ~~~g~~~-~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G-g~~~~-~~~~~~~~~~~~~~~~~~-------------- 268 (385)
T PRK05958 207 HGTGVLG-PQGRGLAAEAGLAGEPDVILVGTLGKALGS-SG-AAVLG-SETLIDYLINRARPFIFT-------------- 268 (385)
T ss_pred ccccccC-CCCCchHHhhCCCCCCceEEEEechhhccc-CC-cEEEc-CHHHHHHHHHhCccceec--------------
Confidence 9643321 1111000 1121 1 24678899999974 33 55443 443332211111122110
Q ss_pred cCcC-CcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHH
Q psy9807 364 PLGR-RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLW 442 (561)
Q Consensus 364 ~~sr-~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w 442 (561)
.+. ......++.+++.+... .++.++..++.+++.+.|++. ++++.. +..+++.|.+
T Consensus 269 -~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~~~~~----------------- 326 (385)
T PRK05958 269 -TALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL-GFQLMD-SQSAIQPLIV----------------- 326 (385)
T ss_pred -CCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcCC-CCCCEEEEEe-----------------
Confidence 111 11222334445444321 567788888999999999876 565432 3344444322
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee---eE
Q psy9807 443 FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS---KI 519 (561)
Q Consensus 443 ~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~ 519 (561)
+ ......++.++|.+.|....... ..
T Consensus 327 --------------------------------------------------~-~~~~~~~~~~~l~~~gI~v~~~~~~~~~ 355 (385)
T PRK05958 327 --------------------------------------------------G-DNERALALAAALQEQGFWVGAIRPPTVP 355 (385)
T ss_pred --------------------------------------------------C-CHHHHHHHHHHHHHCCceEecccCCCCC
Confidence 1 11224578888888875543211 12
Q ss_pred CCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 520 RDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 520 ~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
.+..++|+++. .+++++|++++++.|+++
T Consensus 356 ~~~~~lRis~~-~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 356 AGTSRLRITLT-AAHTEADIDRLLEALAEA 384 (385)
T ss_pred CCCceEEEEec-CCCCHHHHHHHHHHHHhc
Confidence 34568999965 455788999999998764
No 89
>PRK15029 arginine decarboxylase; Provisional
Probab=99.74 E-value=2.7e-16 Score=173.40 Aligned_cols=230 Identities=13% Similarity=0.058 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
.-.++.+..+++||.+.+| ++++|+|.+|..++.++... ++++++-... .|+
T Consensus 206 ~I~eAq~~aA~~fgA~~t~----------FlvNGST~gn~a~i~a~~~~-----------------gd~Vlv~RN~HKSv 258 (755)
T PRK15029 206 AFGESEKYAARVFGADRSW----------SVVVGTSGSNRTIMQACMTD-----------------NDVVVVDRNCHKSI 258 (755)
T ss_pred HHHHHHHHHHHHhCCCcEE----------EEeCChhHHHHHHHHHhcCC-----------------CCEEEeecccHHHH
Confidence 4556667789999998764 67888888898777664321 3356666666 999
Q ss_pred HHHHHhccCCeEEeeC--CC----CccC-----hhhHHHHHhhhchhh--cCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 209 EVVMLDWLGKMLDLPK--EF----LACS-----GGKGGGVIQRKSDRE--MCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 209 ~kaa~~~g~~v~~v~~--~~----g~~d-----~~~Le~~i~~~~~~~--~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
..++.+.|+..+.+++ +. +.++ ++.++++|+++++.+ .+.+|.+|++|. .|+.|.+-++++|+++|
T Consensus 259 ~~al~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~-PTY~Gv~~di~~I~~~~ 337 (755)
T PRK15029 259 EQGLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTN-CTYDGVCYNAKEAQDLL 337 (755)
T ss_pred HHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEEC-CCCcceeeCHHHHHHHH
Confidence 9999999999888865 21 3455 899999997743322 345676666654 77889999999999999
Q ss_pred hhcCceEEechhcccccccCccccc--ccc----Cccccc-eeeecCCccccccccceeEEecCh------hhHHHhh--
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRY--LMK----GVELAD-SFNFNPHKWMLVTFDCSAMWLKDP------SWVVNAF-- 340 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~--~~~----gi~~aD-si~~~~HK~l~~P~g~g~l~~r~~------~~l~~~~-- 340 (561)
+++|+.||||.|||+.+.|.|.++. .+. ....|| .++-|.||.|.+-..++++.+++. +.+..++
T Consensus 338 h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~ 417 (755)
T PRK15029 338 EKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMM 417 (755)
T ss_pred HhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHH
Confidence 9999999999999999988887653 221 113578 999999999999999999999654 2232222
Q ss_pred --ccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy9807 341 --NVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR 409 (561)
Q Consensus 341 --~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g 409 (561)
+++|.|+-.. ++-+ +.+.+-...-.+.+++..+.+..|++.+.++++
T Consensus 418 ~qSTSPSY~LmA--------------------SLD~--ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~ 466 (755)
T PRK15029 418 HATTSPLYAICA--------------------SNDV--AVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_pred HcCCCcHHHHHH--------------------HHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccc
Confidence 1233332111 1111 112222212345667778888888888887765
No 90
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.74 E-value=1.7e-15 Score=159.78 Aligned_cols=302 Identities=12% Similarity=-0.018 Sum_probs=182.9
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
..++.+++.+++++++|.++ .+++++|+++|..++.+.. ++ ++.+++....
T Consensus 85 ~~~l~~~l~~~la~~~g~~~-----------~i~~tsG~~a~~~~~~~l~----------~~-------gd~vi~~~~~~ 136 (397)
T PRK06939 85 TQDLHKELEEKLAKFLGTED-----------AILYSSCFDANGGLFETLL----------GK-------EDAIISDALNH 136 (397)
T ss_pred CcHHHHHHHHHHHHHhCCCc-----------EEEEcChHHHHHHHHHHhC----------CC-------CCEEEEEhhhh
Confidence 35677888899999998753 3666666888876654321 01 2234444434
Q ss_pred chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEec
Q psy9807 206 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVD 285 (561)
.+...++...+.+++.++ .+|+++|++.+++ ....+.++.+|+.....+.+|.+.|+++|.++|++||+|+++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~----~~d~~~l~~~i~~--~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~D 210 (397)
T PRK06939 137 ASIIDGVRLCKAKRYRYA----NNDMADLEAQLKE--AKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVD 210 (397)
T ss_pred HHHHHHHHhcCCceEEeC----CCCHHHHHHHHHh--hhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEE
Confidence 666667777788877776 3689999998865 3323335667777667788999999999999999999999999
Q ss_pred hhcccccccCc-cccccccCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccc
Q psy9807 286 AAYAGSAFICP-ENRYLMKGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQI 363 (561)
Q Consensus 286 aA~gg~~~~~~-~~~~~~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (561)
++|+.+..... .......++ +..|+++.++||+++.+. .|+++.+ +..+.........|...
T Consensus 211 e~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r-~G~v~~~-~~~~~~l~~~~~~~~~~-------------- 274 (397)
T PRK06939 211 DSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGAS-GGYTAGR-KEVIDWLRQRSRPYLFS-------------- 274 (397)
T ss_pred CcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccC-ceEEEeC-HHHHHHHHHhCcccccc--------------
Confidence 99963222111 000001122 245899999999996553 4666654 33333221111112110
Q ss_pred cCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHH
Q psy9807 364 PLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLW 442 (561)
Q Consensus 364 ~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w 442 (561)
++... .+..+..+++.+. ...++.++..++.+++.+.|++. ++++.. +..+.+.+
T Consensus 275 -~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~~~------------------- 330 (397)
T PRK06939 275 -NSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAA-GFTLGP-GEHPIIPV------------------- 330 (397)
T ss_pred -CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCcCC-CCCCEEEE-------------------
Confidence 11111 1222333344332 13466777888889999999876 565432 22222111
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee---eE
Q psy9807 443 FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS---KI 519 (561)
Q Consensus 443 ~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~ 519 (561)
.. +......++.+.|.++|....... ..
T Consensus 331 ------------------------------------------------~~-~~~~~~~~~~~~L~~~gI~v~~~~~~~~~ 361 (397)
T PRK06939 331 ------------------------------------------------ML-GDAKLAQEFADRLLEEGVYVIGFSFPVVP 361 (397)
T ss_pred ------------------------------------------------EE-CCHHHHHHHHHHHHHCCceEeeeCCCCCC
Confidence 11 111224578888888875544221 11
Q ss_pred CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 520 RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 520 ~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.+..++|++++..+ ++++++++++.|+++.++
T Consensus 362 ~~~~~iRi~~~~~~-~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 362 KGQARIRTQMSAAH-TKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred CCCceEEEEECCCC-CHHHHHHHHHHHHHHHHH
Confidence 23468999876444 688999999999887655
No 91
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.74 E-value=3.3e-15 Score=156.92 Aligned_cols=313 Identities=11% Similarity=0.023 Sum_probs=182.4
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|...+...++|+++ ++++|.+ ..+++++|+.+|..++.+..+ .+..+
T Consensus 39 yg~~~~~~~LE~~l----A~~~g~e-----------~al~~~sG~~a~~~~i~~l~~------------------~GD~V 85 (392)
T PLN03227 39 YGTIDAHLELEQCM----AEFLGTE-----------SAILYSDGASTTSSTVAAFAK------------------RGDLL 85 (392)
T ss_pred cCChHHHHHHHHHH----HHHhCCC-----------cEEEecCcHHHHHHHHHHhCC------------------CCCEE
Confidence 33344556677655 6666765 358888899999866655211 11234
Q ss_pred Eeccc--chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhh--------cCCceEEEEEecCCCCCccccCHHH
Q psy9807 201 ASPAC--TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDRE--------MCSDLLQVVATLGTTNCCAFDCLEE 270 (561)
Q Consensus 201 v~~s~--~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~--------~g~~p~~vv~t~gtt~tG~idpl~e 270 (561)
++... .|+..++++.+.+++.++ +.|++++++.++. ... ...++.+|++....+.+|.+.|+++
T Consensus 86 l~~~~~h~s~~~~~~l~~~~~~~~~----~~d~~~l~~~~~~--i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~ 159 (392)
T PLN03227 86 VVDRGVNEALLVGVSLSRANVRWFR----HNDMKDLRRVLEQ--VRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKE 159 (392)
T ss_pred EEeccccHHHHHHHHHcCCeEEEeC----CCCHHHHHHHHHH--hhhhccccccccCCCcEEEEEcCCcCCCCcccCHHH
Confidence 43333 777777777777777777 4466777766544 211 1124677888888889999999999
Q ss_pred HHHHHhhcCceEEechhcccccccCcccccccc--C---ccccceeeecCCccccccccceeEEecChhhHHHhhccCCC
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICPENRYLMK--G---VELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPL 345 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~--g---i~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~ 345 (561)
|.++|++||++++||.+|+.+ .+.+..+...+ | ...+|.++.+.+|+++ |.+ |++. .+.+...........
T Consensus 160 i~~l~~~~g~~livDe~~~~g-~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~g-g~v~-~~~~~~~~~~~~~~~ 235 (392)
T PLN03227 160 LVALKEEFHYRLILDESFSFG-TLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SVG-GMTV-GSEEVVDHQRLSGSG 235 (392)
T ss_pred HHHHHHHcCCEEEEECccccc-ccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-ccC-cEEe-cCHHHHHHHHHhCcC
Confidence 999999999999999999732 22222111111 1 2356999999999876 332 3333 343333211111111
Q ss_pred ccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec----------
Q psy9807 346 YLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL-GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY---------- 414 (561)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~---------- 414 (561)
+.+ +-...++..|+++..+ .....++++++..+++++|++.|++. ++..+.
T Consensus 236 ~~~-----------------~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~ 297 (392)
T PLN03227 236 YCF-----------------SASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITS 297 (392)
T ss_pred ccc-----------------cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCC
Confidence 111 1111233344444333 22224567888899999999999863 332211
Q ss_pred cccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC
Q psy9807 415 EVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG 494 (561)
Q Consensus 415 ~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~ 494 (561)
....+++.+.+.+.. .. -.. .
T Consensus 298 ~~~~~i~~i~~~~~~--~~--------------------------------------------------------~~~-~ 318 (392)
T PLN03227 298 DPISPIIYLRLSDQE--AT--------------------------------------------------------RRT-D 318 (392)
T ss_pred CCCCCEEEEEeCCHH--Hh--------------------------------------------------------hhh-h
Confidence 122333333221100 00 000 0
Q ss_pred CcHHHHHHHHHHHhCCcEEEE-ee------eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 495 PNEINEKLLKRINGNGKIHLV-PS------KIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 495 ~~~~~~~l~~~L~~~g~~~~~-~~------~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
.+....++.+.+.+.|.+... +. ..-....+|++++..+ |++||++++++|+++.++++
T Consensus 319 ~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~-t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 319 ETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASH-TREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred hhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 011234788888899865532 10 0112468999977655 77799999999999988764
No 92
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.73 E-value=6.2e-17 Score=166.95 Aligned_cols=234 Identities=16% Similarity=0.133 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
.-.+..+.+++++|.+.+| +++.|+|.+|..++.++... ++++++-... .|+
T Consensus 67 ~I~eAe~~aA~~fGAd~t~----------flvnGsT~g~~a~i~a~~~~-----------------gd~VLv~RN~HkSv 119 (417)
T PF01276_consen 67 IIKEAEELAARAFGADKTF----------FLVNGSTSGNQAMIMALCRP-----------------GDKVLVDRNCHKSV 119 (417)
T ss_dssp HHHHHHHHHHHHHTESEEE----------EESSHHHHHHHHHHHHHTTT-----------------TCEEEEETT--HHH
T ss_pred HHHHHHHHHHHhcCCCeEE----------EEecCchHHHHHHHHHhcCC-----------------CCEEEEcCCcHHHH
Confidence 4556667889999998764 67777788898888776432 3456666666 999
Q ss_pred HHHHHhccCCeEEeeC--C-C---CccCh-----hhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 209 EVVMLDWLGKMLDLPK--E-F---LACSG-----GKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 209 ~kaa~~~g~~v~~v~~--~-~---g~~d~-----~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
..|+.+.|+..+.+++ + . +.+++ +.++++|++ ..... .+.+|++| ..|+.|.+-++++|+++|++
T Consensus 120 ~~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~--~p~~k-~~~~vvlt-~PTY~Gv~~di~~I~~~~h~ 195 (417)
T PF01276_consen 120 YNALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKE--HPDAK-APRLVVLT-SPTYYGVCYDIKEIAEICHK 195 (417)
T ss_dssp HHHHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHH--CTTCH-CESEEEEE-SS-TTSEEE-HHHHHHHHCC
T ss_pred HHHHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHh--Ccccc-CceEEEEe-CCCCCeEEECHHHHHHHhcc
Confidence 9999999999888877 2 1 35667 899999987 32211 24445554 47888999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccc-------eeeecCCccccccccceeEEecChh-----hHHHhh----c
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELAD-------SFNFNPHKWMLVTFDCSAMWLKDPS-----WVVNAF----N 341 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aD-------si~~~~HK~l~~P~g~g~l~~r~~~-----~l~~~~----~ 341 (561)
+|+.|+||.|||+.+.|.+-.+... --.|| .++-|.||.|.+...++++.+++.. .+++++ +
T Consensus 196 ~~~~llvDEAhGah~~F~~lp~~a~--~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~T 273 (417)
T PF01276_consen 196 HGIPLLVDEAHGAHFGFHPLPRSAL--ALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQT 273 (417)
T ss_dssp TECEEEEE-TT-TTGGCSGGGTTCS--STTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-
T ss_pred cCCEEEEEccccccccCCCCccchh--hccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcC
Confidence 9999999999999988874333322 12468 9999999999999999999998763 222222 2
Q ss_pred cCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH---hcCCCeEEeccccc
Q psy9807 342 VDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLV---RSDDRFEVIYEVLM 418 (561)
Q Consensus 342 ~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l---~~~~g~~l~~~~~~ 418 (561)
.+|.|+... + +=.+.+.+-...-++++++..++++.+++.| .++++|+++.+...
T Consensus 274 TSPSY~lmA--------------------S--lD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v 331 (417)
T PF01276_consen 274 TSPSYPLMA--------------------S--LDVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDV 331 (417)
T ss_dssp SS--HHHHH--------------------H--HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEE
T ss_pred CChHHHHHH--------------------H--HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCcccc
Confidence 233332110 0 1112233323344567788888888999998 67889999877543
No 93
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.73 E-value=1.9e-15 Score=159.24 Aligned_cols=259 Identities=11% Similarity=0.038 Sum_probs=161.8
Q ss_pred HHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q psy9807 104 AIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRV 183 (561)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~ 183 (561)
..+.+.+...+......|...+...++++.+.+|+.+.+|.+-+ ....++|+|+|+++..++.+...
T Consensus 49 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~~------ 115 (391)
T PRK08361 49 KNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVD-------VDNVIVTAGAYEATYLAFESLLE------ 115 (391)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------cccEEEeCChHHHHHHHHHHhcC------
Confidence 34445555555443334545556678999999999888775321 12678999999998766554311
Q ss_pred HhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 184 KEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 184 ~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
+ ++.+++.... .++...+...|.+++.+|. . ++.+|+++|++.+.+ .+.+|+.+..+
T Consensus 116 ----~-------g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~--------~~~~v~i~~p~ 176 (391)
T PRK08361 116 ----E-------GDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK--------RTRMIVINYPN 176 (391)
T ss_pred ----C-------CCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc--------ccEEEEEeCCC
Confidence 0 1234444434 5566677778899999998 3 457999999998876 35567777788
Q ss_pred CCCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChh
Q psy9807 260 TNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPS 334 (561)
Q Consensus 260 t~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~ 334 (561)
+.||.+-| +++|+++|+++++++++|.+|+....-.............-+.++.+++|.++.| | +|.++.. +.
T Consensus 177 NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~-GlRiG~~~~~-~~ 254 (391)
T PRK08361 177 NPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMT-GWRLGFVIAP-EQ 254 (391)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCc-HhhhhhhccC-HH
Confidence 89999988 8999999999999999999997443211111111111112367889999988766 5 7777774 33
Q ss_pred hHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 335 WVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG----VKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g----~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
.+...... ..+... . ...+...++...+. ...+++..+...+..+.+.+.|++.+++
T Consensus 255 ~~~~~~~~-~~~~~~----~--------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 315 (391)
T PRK08361 255 VIKDMIKL-HAYIIG----N--------------VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHI 315 (391)
T ss_pred HHHHHHHH-Hhhhcc----C--------------CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 33322111 111000 0 01111222222221 1346666777778888889999888787
Q ss_pred EEecc
Q psy9807 411 EVIYE 415 (561)
Q Consensus 411 ~l~~~ 415 (561)
++..+
T Consensus 316 ~~~~p 320 (391)
T PRK08361 316 KVFEP 320 (391)
T ss_pred eecCC
Confidence 76544
No 94
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.73 E-value=1.5e-16 Score=160.78 Aligned_cols=225 Identities=12% Similarity=-0.012 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
+-+++.+.+++++|.+.. .++++|+|.+|..++.+.... ++++++.... .|+
T Consensus 60 ~i~~~~~~~A~~~ga~~~----------~~~~~Gst~a~~~~l~al~~~-----------------gd~Vlv~~~~h~s~ 112 (294)
T cd00615 60 PIKEAQELAARAFGAKHT----------FFLVNGTSSSNKAVILAVCGP-----------------GDKILIDRNCHKSV 112 (294)
T ss_pred HHHHHHHHHHHHhCCCCE----------EEEcCcHHHHHHHHHHHcCCC-----------------CCEEEEeCCchHHH
Confidence 345555667888887542 245888899998877654211 2345554444 888
Q ss_pred HHHHHhccCCeEEeeC--CC-----CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCce
Q psy9807 209 EVVMLDWLGKMLDLPK--EF-----LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVW 281 (561)
Q Consensus 209 ~kaa~~~g~~v~~v~~--~~-----g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~ 281 (561)
..++.+.|.+++.+++ +. +.+|++++++++++ . ..+.+|+++.. |.+|.+.|+++|+++|++||++
T Consensus 113 ~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~--~----~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~ 185 (294)
T cd00615 113 INGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIE--H----PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLP 185 (294)
T ss_pred HHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHh--C----CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCe
Confidence 8888888888888876 22 47999999999965 2 14667777754 6799999999999999999999
Q ss_pred EEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcc
Q psy9807 282 LHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHW 361 (561)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (561)
++||+||++...+.+..+.... ...+|+++.++||++++|.++|++++++.......+.........
T Consensus 186 livDeA~~~~~~~~~~~~~~~~-~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~~t------------ 252 (294)
T cd00615 186 VLVDEAHGAHFRFHPILPSSAA-MAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLHQS------------ 252 (294)
T ss_pred EEEECcchhhhccCcccCcchh-hcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHHCC------------
Confidence 9999999976555543332111 125699999999999998889998887641111111110000000
Q ss_pred cccCcCCcc-hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy9807 362 QIPLGRRFR-SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVR 405 (561)
Q Consensus 362 ~~~~sr~~~-al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~ 405 (561)
.+..+. ...+-.+++.+...| .+++++..++++++++.|.
T Consensus 253 ---tsps~~~~asl~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 253 ---TSPSYLILASLDVARAMMALEG-KELVEELIELALYARQEIN 293 (294)
T ss_pred ---CCcHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHh
Confidence 011111 122223334443344 4567888889999998875
No 95
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.72 E-value=3.6e-15 Score=168.90 Aligned_cols=355 Identities=9% Similarity=0.001 Sum_probs=210.0
Q ss_pred CCCCC--CCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCC---ChHHHH-HHHHHhh-ccc--cccccccChhhHHH
Q psy9807 60 ETAPD--TPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTAN---SYPAIV-ADILSDS-IAC--IGFTWIASPACTEL 130 (561)
Q Consensus 60 ~~~p~--~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~---~~~~~~-~~~l~~~-~n~--~~~~~~~sp~~~~l 130 (561)
..+|+ .+.+-.++++.+.+.-..+.. |++|...+. -+|+++ ..++... +-+ ..+.-+.|...-+.
T Consensus 76 l~lp~~~~~~sE~e~~~~~~~la~kN~~------~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqa 149 (993)
T PLN02414 76 MKLSKYDEGLTESQMLEHMKSLASKNKV------FKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLES 149 (993)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCc------cccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHH
Confidence 34562 567889999998886443322 333333222 133333 3333221 111 11122334445555
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c---
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T--- 206 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~--- 206 (561)
-.+...+++++.|++.. ...|+.++|.+.-.++++.+... +..+++++..++ .
T Consensus 150 l~~~Qt~ia~LtG~~~a---------naSL~d~aTAaaea~~~a~~~~~--------------g~~~~VlVs~~~hP~~~ 206 (993)
T PLN02414 150 LLNYQTMITDLTGLPMS---------NASLLDEGTAAAEAMAMCNNILK--------------GKKKKFLIASNCHPQTI 206 (993)
T ss_pred HHHHHHHHHHHhCCChh---------hEeecCChHHHHHHHHHHHhccc--------------CCCCEEEEcCccCHhHH
Confidence 56788899999999875 67899988877544444322110 001345555544 2
Q ss_pred -hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEec
Q psy9807 207 -ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 207 -s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVD 285 (561)
.+..-++..|++++.+|.++ .+ ...+ .. +.+.+.-++.+|.+.|+++|+++||++|+++.|
T Consensus 207 ~v~~t~a~~~GieV~~v~~~~--~~------~~~~--------~v-~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV- 268 (993)
T PLN02414 207 DVCQTRADGLGLEVVVADEKD--FD------YSSG--------DV-CGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM- 268 (993)
T ss_pred HHHHHhhhhcCCEEEEecchh--hc------cccC--------ce-EEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-
Confidence 22333445688899888521 00 1111 22 233467778899999999999999999999999
Q ss_pred hhcccccccCccccccccCccccceeeecCCccc-----cccccceeEEecChhhHHHhhccCCCccccC-CCCCCCCCC
Q psy9807 286 AAYAGSAFICPENRYLMKGVELADSFNFNPHKWM-----LVTFDCSAMWLKDPSWVVNAFNVDPLYLKHD-QQGSAPDYR 359 (561)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l-----~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~-~~~~~~~~~ 359 (561)
+|+..+....... +--.||+++.++|||+ ++|. +|++++++.- .+ .+. +..+... +..+.+.+.
T Consensus 269 aad~lal~~l~~p-----ge~GADi~vgsgqKwg~P~G~GGP~-aGflavr~~~-~r-~~P--griVG~s~d~~g~~~~~ 338 (993)
T PLN02414 269 ATDLLALTMLKPP-----GEWGADIVVGSAQRFGVPMGYGGPH-AAFLATSQEY-KR-LMP--GRIIGVSVDSSGKPALR 338 (993)
T ss_pred EECHHHhcCCCCH-----hhccCcEEEECCCccccCCCCCCCC-eeEEEECHHH-Hh-hCC--CcccCcccCCCCCcccc
Confidence 7776544433211 1125699999999998 4554 8999998752 22 221 1122111 011111110
Q ss_pred --cccccCcCCcc--------hHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeee
Q psy9807 360 --HWQIPLGRRFR--------SLKLWFVL-----RLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 424 (561)
Q Consensus 360 --~~~~~~sr~~~--------al~lw~~l-----~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~ 424 (561)
-.+.+-.+|+. ..++++++ .++|..|++++.++.+.++.++++.|++. |+++..++..++|+|
T Consensus 339 l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~~~f~~vt~- 416 (993)
T PLN02414 339 MAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSLPFFDTVKV- 416 (993)
T ss_pred cccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCCCCcCeEEE-
Confidence 00111122221 23444444 35588999999999999999999999874 788876655556554
Q ss_pred cccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHH
Q psy9807 425 LKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLK 504 (561)
Q Consensus 425 ~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~ 504 (561)
+.. + ..++.+
T Consensus 417 ------------------------------------------------------------------~~~--~--~~~v~~ 426 (993)
T PLN02414 417 ------------------------------------------------------------------KCS--D--ADAIAD 426 (993)
T ss_pred ------------------------------------------------------------------ecC--C--HHHHHH
Confidence 332 1 357888
Q ss_pred HHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9807 505 RINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKT 548 (561)
Q Consensus 505 ~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 548 (561)
+|.+.|+.. +... ...+|+|+. ..+|++|||+++++|..
T Consensus 427 ~L~~~gI~l-~~~~---~~~lrvs~~-e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 427 AAAKVGINL-RVVD---ANTVTVSFD-ETTTLEDVDKLFKVFAG 465 (993)
T ss_pred HHHHCCCee-EEec---CCeEEEEee-ccCCHHHHHHHHHHHcc
Confidence 998887633 2211 236999965 67799999999999964
No 96
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.72 E-value=6.9e-16 Score=161.00 Aligned_cols=219 Identities=16% Similarity=0.134 Sum_probs=148.1
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ ++++|.+ ..++++||++||..++.+.... ++.+++.
T Consensus 38 ~~p~~~~le~~l----a~l~g~~-----------~a~~~~sG~~Ai~~~l~~l~~~-----------------gd~Vl~~ 85 (369)
T cd00614 38 GNPTVDALEKKL----AALEGGE-----------AALAFSSGMAAISTVLLALLKA-----------------GDHVVAS 85 (369)
T ss_pred CChhHHHHHHHH----HHHHCCC-----------CEEEEcCHHHHHHHHHHHHcCC-----------------CCEEEEC
Confidence 678888888866 5666654 4689999999998887764211 1233333
Q ss_pred ccc-ch----HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PAC-TE----LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~-~s----~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
... .+ +.+.+...|.++..++. .|++++++++++ .+.+|++...++.+|.+.|+++|+++|++
T Consensus 86 ~~~y~~~~~~~~~~~~~~g~~~~~v~~----~d~~~l~~~i~~--------~~~~v~~e~~~np~g~~~dl~~i~~la~~ 153 (369)
T cd00614 86 DDLYGGTYRLFERLLPKLGIEVTFVDP----DDPEALEAAIKP--------ETKLVYVESPTNPTLKVVDIEAIAELAHE 153 (369)
T ss_pred CCCcchHHHHHHHHHhhcCeEEEEeCC----CCHHHHHHhcCC--------CCeEEEEECCCCCCCeecCHHHHHHHHHH
Confidence 222 22 22334456778888874 358888888865 56788888889999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
||++++||++|+.+....+ .-. .+|.++.+++|+++++.. .|+++.++........... .++
T Consensus 154 ~g~~livD~t~~~~~~~~~----~~~---g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-~~~-------- 217 (369)
T cd00614 154 HGALLVVDNTFATPYLQRP----LEL---GADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLR-LAL-------- 217 (369)
T ss_pred cCCEEEEECCCcchhcCCh----hhh---CCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHH-Hhh--------
Confidence 9999999999986543221 111 459999999999987653 5666665533332221110 000
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+-.......|+.++.+ +.+..++++..++++++.+.|+++|+++-+
T Consensus 218 ----------g~~~~p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V 263 (369)
T cd00614 218 ----------GTILSPFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVERV 263 (369)
T ss_pred ----------CCCCCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 0012344556665554 456678899999999999999999876543
No 97
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.71 E-value=5.8e-15 Score=154.97 Aligned_cols=258 Identities=10% Similarity=0.041 Sum_probs=159.1
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+...+......|...+...++.+.+.+|+.+.+|.+-+ ....++|+|+++++..++.+....
T Consensus 42 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~-------~~~i~~t~g~~~al~~~~~~l~~~------- 107 (382)
T PRK06108 42 IRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATP-------PERIAVTSSGVQALMLAAQALVGP------- 107 (382)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcC-------cceEEEeCChHHHHHHHHHHhcCC-------
Confidence 444444444333333555556678999999999998884321 125788999999876665543110
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C---CCccChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E---FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~---~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
++.+++.... ......+...|.+++.+|. . ++.+|+++|++.+.+ .+.+|+.+..++
T Consensus 108 ----------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~--------~~~~i~l~~p~N 169 (382)
T PRK06108 108 ----------GDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP--------RTRALFINSPNN 169 (382)
T ss_pred ----------CCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc--------cceEEEEECCCC
Confidence 1234444444 4556667788999999998 3 246999999988865 455677777888
Q ss_pred CCcccc---CHHHHHHHHhhcCceEEechhccccccc-Ccccccccc--CccccceeeecCCcccccc-ccceeEEecCh
Q psy9807 261 NCCAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFI-CPENRYLMK--GVELADSFNFNPHKWMLVT-FDCSAMWLKDP 333 (561)
Q Consensus 261 ~tG~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~-~~~~~~~~~--gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~ 333 (561)
.||.+- ++++|+++|++||+|+++|.+|+....- ......... ....-..+..+++|.++.| ..+|.++..+
T Consensus 170 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~- 248 (382)
T PRK06108 170 PTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP- 248 (382)
T ss_pred CCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH-
Confidence 899765 5788999999999999999999864332 111111111 1111246788999988654 4578888743
Q ss_pred hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 334 SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
..+.. +.....|... + ...+...++...+ +...++++.++..+..+++.+.|++.++++
T Consensus 249 ~~~~~-~~~~~~~~~~---------------~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 309 (382)
T PRK06108 249 ALGQV-LEKLIEYNTS---------------C---VAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVE 309 (382)
T ss_pred HHHHH-HHHHHHhccc---------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 33322 2111111000 0 0111111222222 344567778888888999999998888887
Q ss_pred Eecc
Q psy9807 412 VIYE 415 (561)
Q Consensus 412 l~~~ 415 (561)
+..+
T Consensus 310 ~~~p 313 (382)
T PRK06108 310 VAKP 313 (382)
T ss_pred ccCC
Confidence 6644
No 98
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.71 E-value=7.9e-15 Score=154.61 Aligned_cols=329 Identities=11% Similarity=0.006 Sum_probs=198.0
Q ss_pred HHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 105 IVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
.+.+.+...++.....|........+.+.+.+|+.+..|..-+ ....++|+|+|+++..++.+....
T Consensus 48 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~~~~g~~~a~~~~~~~~~~~------ 114 (393)
T PRK05764 48 HIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYD-------PSQVIVTTGAKQALYNAFMALLDP------ 114 (393)
T ss_pred HHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCC-------HHHEEEeCCcHHHHHHHHHHhcCC------
Confidence 3444445545433334555555688999999999887664211 125789999999987665543211
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
++.+++.... ..+..+++..|.+++.+|. . .+.+|++.|++++++ .+.+|+++.-++
T Consensus 115 -----------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~p~N 175 (393)
T PRK05764 115 -----------GDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP--------KTKALILNSPSN 175 (393)
T ss_pred -----------CCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc--------cceEEEEECCCC
Confidence 1234444444 5666677788999999998 2 457899999998865 345666677777
Q ss_pred CCcccc---CHHHHHHHHhhcCceEEechhcccccccCcc---ccccccCccccceeeecCCccccccc-cceeEEecCh
Q psy9807 261 NCCAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPE---NRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 261 ~tG~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~---~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
.||.+- ++++|+++|++||+|+++|.+|+....-.+. ......+...-+.+..+++|.++.|. -+|.+.. +.
T Consensus 176 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~-~~ 254 (393)
T PRK05764 176 PTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG-PK 254 (393)
T ss_pred CCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec-CH
Confidence 889874 5889999999999999999999754321111 11111122223677888999998663 2566664 44
Q ss_pred hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 334 SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
..+.........+ .-....+..+.+.+.+ ....+++..++..++.+++.+.|+++|++.
T Consensus 255 ~~~~~~~~~~~~~-------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 315 (393)
T PRK05764 255 ELIKAMSKLQSHS-------------------TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLE 315 (393)
T ss_pred HHHHHHHHHHhhc-------------------ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 4333221111000 0011223334444444 245566677777788888999999888887
Q ss_pred Eeccccccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 412 VIYEVLMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 412 l~~~~~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
+..+ ..+. +.+++.+..
T Consensus 316 ~~~~-~g~~~~~~~~~~~~------------------------------------------------------------- 333 (393)
T PRK05764 316 CPKP-EGAFYVFPNVSKLL------------------------------------------------------------- 333 (393)
T ss_pred ccCC-CcceEEEEeccccc-------------------------------------------------------------
Confidence 7643 3332 222221100
Q ss_pred ecCCCcHHHHHHHHHHHh-CCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRING-NGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
........++.+.+.+ .|..+..+.......++|+++++ ++++++++++.|.++.++
T Consensus 334 --~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~---~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 334 --GKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT---SLEDLEEGLERIERFLES 391 (393)
T ss_pred --ccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 0000012467777765 46554443333335689999774 578999999999877653
No 99
>KOG1359|consensus
Probab=99.71 E-value=3.7e-15 Score=141.34 Aligned_cols=293 Identities=11% Similarity=0.015 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
+.+-+.+...++++.|-++ .++.+++..||..++.+..+ ++..|+..+
T Consensus 111 q~iHk~LE~kiAqfh~rED-----------~ilypscfdANag~feail~-------------------pedAvfSDeLN 160 (417)
T KOG1359|consen 111 QDIHKLLESKIAQFHGRED-----------TILYPSCFDANAGAFEAILT-------------------PEDAVFSDELN 160 (417)
T ss_pred hHHHHHHHHHHHHHhCCCc-----------eEEeccccccchHHHHHhcC-------------------hhhhhhccccc
Confidence 3344444456688777654 58999999999776655321 233444444
Q ss_pred -chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEe
Q psy9807 206 -TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHV 284 (561)
Q Consensus 206 -~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhV 284 (561)
.|+..+.++.. ..++.|+-.|+..+.+ .- ..+-++|+.....++.|.+.|+++|.+++++||+.+.|
T Consensus 161 hASIIdGirLck--------ry~h~dv~~l~~~l~~--a~--k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfi 228 (417)
T KOG1359|consen 161 HASIIDGIRLCK--------RYRHVDVFDLEHCLIS--AC--KMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFI 228 (417)
T ss_pred cchhhhhhHHHh--------hhccchhHHHHHHHHH--hh--hheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEE
Confidence 78877766544 3457889999988875 21 22556777778889999999999999999999999999
Q ss_pred chhcccccccCccccccc---cCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcc
Q psy9807 285 DAAYAGSAFICPENRYLM---KGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHW 361 (561)
Q Consensus 285 DaA~gg~~~~~~~~~~~~---~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (561)
|.+|+-++ +.+..++.. .-..+.|.+.....|.+++. .|.+...+.....-..+...+|++...-. +...
T Consensus 229 DecHaTgf-~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~li~llrqr~RpylFSnslp--pavV-- 301 (417)
T KOG1359|consen 229 DECHATGF-FGETGRGTAEEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKPLISLLRQRSRPYLFSNSLP--PAVV-- 301 (417)
T ss_pred eeccccee-ecCCCCChHHHhCCCCcceehhhhhhhhhcCC--CCCCccCChhHHHHHHhcCCceeecCCCC--hhhh--
Confidence 99998544 444444322 22346799999999999843 24444444444333235566888764310 0000
Q ss_pred cccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhH
Q psy9807 362 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKL 441 (561)
Q Consensus 362 ~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~ 441 (561)
.-+.+++.. ...-.+.+.+...+.++|++..+.. ||++..... ++
T Consensus 302 -------~~a~ka~dl-----lm~s~~~i~~~~a~~qrfr~~me~a-GftIsg~~h-PI--------------------- 346 (417)
T KOG1359|consen 302 -------GMAAKAYDL-----LMVSSKEIQSRQANTQRFREFMEAA-GFTISGASH-PI--------------------- 346 (417)
T ss_pred -------hhhHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHhc-CceecCCCC-Cc---------------------
Confidence 112222221 1223456677788889999988875 999876421 11
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEE---eee
Q psy9807 442 WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLV---PSK 518 (561)
Q Consensus 442 w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~~ 518 (561)
|...-++..+.....+.|...|...+. |.+
T Consensus 347 -----------------------------------------------~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvV 379 (417)
T KOG1359|consen 347 -----------------------------------------------CPVMLGDARLASKMADELLKRGIYVIGFSYPVV 379 (417)
T ss_pred -----------------------------------------------cceecccHHHHHHHHHHHHhcCceEEeecCCcC
Confidence 111124566677888999999987664 678
Q ss_pred ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 519 IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 519 ~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+.|+..+|+.+...| +++|||++++++.++++-
T Consensus 380 P~gkariRVqiSAaH-t~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 380 PKGKARIRVQISAAH-TEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred CCCceEEEEEEehhc-CHHHHHHHHHHHHHHHHh
Confidence 899999999988877 566999999999998764
No 100
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.71 E-value=4.6e-15 Score=155.91 Aligned_cols=219 Identities=15% Similarity=0.178 Sum_probs=146.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ ++++|.+. .+++++|+.++..++.+... + ++++++.
T Consensus 63 ~~p~~~~Le~~l----A~l~G~~~-----------~~~~~sG~~Ai~~~l~~~l~----------~-------Gd~Vl~~ 110 (398)
T PRK07504 63 SNPTVDMFEKRM----CALEGAED-----------ARATASGMAAVTAAILCQVK----------A-------GDHVVAA 110 (398)
T ss_pred CCchHHHHHHHH----HHHhCCCe-----------eeEecCHHHHHHHHHHHHhC----------C-------CCEEEEc
Confidence 467777777655 77788864 36788999888765543210 0 2244443
Q ss_pred cccch-----HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PACTE-----LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~~s-----~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
...|. +...+...|.+++.++ .+|+++++++|.+ ++.+|+++..++.+|.+-|+++|+++|++
T Consensus 111 ~~~y~~~~~~~~~~~~~~G~~v~~vd----~~d~e~l~~ai~~--------~tklV~lesp~NptG~v~dl~~I~~la~~ 178 (398)
T PRK07504 111 RALFGSCRYVVETLLPRYGIESTLVD----GLDLDNWEKAVRP--------NTKVFFLESPTNPTLEVIDIAAVAKIANQ 178 (398)
T ss_pred CCchhHHHHHHHHHHhhcCeEEEEEC----CCCHHHHHHhcCc--------CceEEEEECCCCCCcEecCHHHHHHHHHH
Confidence 33322 2233344577777776 5789999998876 57789999999999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAP 356 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (561)
+|++++||++|+.+....+ .-. .+|.++.++|||++++. ..|.+++.+...+.+.+. .|+..
T Consensus 179 ~gi~lvvD~a~a~~~~~~~----~~~---gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~~------- 241 (398)
T PRK07504 179 AGAKLVVDNVFATPLFQKP----LEL---GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFRH------- 241 (398)
T ss_pred cCCEEEEECCccccccCCc----hhh---CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHHH-------
Confidence 9999999999975433221 111 36999999999998764 244444444443322111 11100
Q ss_pred CCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 357 DYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 357 ~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.+........|..++ +.+.+..++++..++++++.+.|+++|++.-
T Consensus 242 --------~g~~~s~~~A~~~l~--~L~tl~~R~~~~~~na~~la~~L~~~p~v~~ 287 (398)
T PRK07504 242 --------TGPSLSPFNAWTLLK--GLETLPVRVRQQTESAAAIADFLAGHPKVAR 287 (398)
T ss_pred --------hCCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHcCCCccE
Confidence 011234455565555 4455788899999999999999999988753
No 101
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.71 E-value=1.1e-14 Score=153.06 Aligned_cols=300 Identities=10% Similarity=-0.050 Sum_probs=179.0
Q ss_pred hhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc
Q psy9807 126 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC 205 (561)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~ 205 (561)
....+-+++.+++++++|.+. .+++++|+++++.++.+..+. ++.+++....
T Consensus 75 g~~~l~~~l~~~l~~~~g~~~-----------~i~~~sG~~a~~~a~~~~~~~-----------------gd~vi~~~~~ 126 (385)
T TIGR01825 75 GTLRLHEELEEKLAKFKKTEA-----------ALVFQSGFNTNQGVLSALLRK-----------------GDIVLSDELN 126 (385)
T ss_pred CCcHHHHHHHHHHHHHhCCCc-----------EEEECcHHHHHHHHHHHhCCC-----------------CCEEEEEccc
Confidence 335677788889999988643 366677799988766543210 1223333322
Q ss_pred -chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEe
Q psy9807 206 -TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHV 284 (561)
Q Consensus 206 -~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhV 284 (561)
.+...++.+.+.++..++ .+|++++++.+.+ ... .++.+|+.....+.+|.+.|+++|+++|++||+|+++
T Consensus 127 ~~~~~~~~~~~g~~~~~~~----~~d~~~l~~~l~~--~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~ 198 (385)
T TIGR01825 127 HASIIDGLRLTKATKKIYK----HADMDDLDRVLRE--NPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYV 198 (385)
T ss_pred cHHHHHHHHhcCCceEEeC----CCCHHHHHHHHHh--hcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEE
Confidence 555556667777776665 7889999998865 321 2456777777788899999999999999999999999
Q ss_pred chhcccccccCcccccc--ccCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcc
Q psy9807 285 DAAYAGSAFICPENRYL--MKGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHW 361 (561)
Q Consensus 285 DaA~gg~~~~~~~~~~~--~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (561)
|++|+.+...... ... ..++ ...|.+..++||+++.+. |++.. +++.+.........|....
T Consensus 199 De~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~g--G~~~~-~~~~~~~~~~~~~~~~~~~----------- 263 (385)
T TIGR01825 199 DDAHGSGVMGEAG-RGTVHHFGLEDKVDIQVGTLSKAIGVVG--GYAAG-HKELIEYLKNRARPFLFST----------- 263 (385)
T ss_pred ECcccccCcCCCC-CccHhhcCCCcCCcEEEEeccHHhhcCC--CEEec-CHHHHHHHHHhCccccccC-----------
Confidence 9999744332110 000 0011 245888899999997543 54443 4433332211111221100
Q ss_pred cccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhH
Q psy9807 362 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKL 441 (561)
Q Consensus 362 ~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~ 441 (561)
.........+..+++.+.. ..+..++..++.+++.+.|++. ++++..+ ..+.+.+
T Consensus 264 ---~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~------------------ 318 (385)
T TIGR01825 264 ---AQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYDTGGS-ETPITPV------------------ 318 (385)
T ss_pred ---CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCCCC-CCCEEEE------------------
Confidence 0000111222333333211 2345666777889999999876 7766532 2223222
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEe---ee
Q psy9807 442 WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVP---SK 518 (561)
Q Consensus 442 w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~---~~ 518 (561)
.. +......++.+.|.++|...... ..
T Consensus 319 -------------------------------------------------~~-~~~~~~~~~~~~L~~~gi~v~~~~~~~~ 348 (385)
T TIGR01825 319 -------------------------------------------------VI-GDEKAAQEFSRRLFDEGIFAQSIVFPTV 348 (385)
T ss_pred -------------------------------------------------EE-CCHHHHHHHHHHHHHCCcEEcccCCCCC
Confidence 11 11112356788888886544221 11
Q ss_pred ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 519 IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 519 ~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
..+..++|+++. ..++++|++++++.|+++.++
T Consensus 349 ~~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 349 PRGTARIRNIPT-AEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CCCCceEEEEEc-CCCCHHHHHHHHHHHHHHHHH
Confidence 234568999855 456888999999999887643
No 102
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.71 E-value=2.9e-15 Score=157.00 Aligned_cols=223 Identities=15% Similarity=0.121 Sum_probs=147.7
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
....|...++|+.+ ++++|.+ ..++++||+.|+..++.+... . ++.++
T Consensus 55 r~~~p~~~~le~~l----A~l~g~~-----------~av~~~sG~~Ai~~~l~al~~--------~---------Gd~Vi 102 (391)
T TIGR01328 55 RLGNPTVSNLEGRI----AFLEGTE-----------AAVATSSGMGAIAATLLTILK--------A---------GDHLI 102 (391)
T ss_pred CCCCchHHHHHHHH----HHHhCCC-----------cEEEECCHHHHHHHHHHHHhC--------C---------CCEEE
Confidence 34567777788855 7777765 358999999988766654311 0 12344
Q ss_pred Eecccc-----hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 201 ASPACT-----ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 201 v~~s~~-----s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+....| .+...+...|+++..++.. |++++++++.+ .+.+|++...++.+|.+-|+++|+++|
T Consensus 103 ~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~----d~e~l~~~i~~--------~tklV~le~p~Np~G~v~dl~~I~~la 170 (391)
T TIGR01328 103 SDECLYGCTFALLEHALTKFGIQVDFINMA----IPEEVKAHIKD--------NTKIVYFETPANPTMKLIDMERVCRDA 170 (391)
T ss_pred EecCcchHHHHHHHHHHhcCCeEEEEECCC----CHHHHHHhhcc--------CCeEEEEECCCCCCCcccCHHHHHHHH
Confidence 333222 2333445567777777743 78888888866 567888888888999999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccc-eeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDC-SAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~-g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
+++|++++||+||+.+....+ .. ..+|.++.+++|+++.|.+. |.+++.+++.+.........++
T Consensus 171 ~~~gi~livD~a~a~~~~~~~----~~---~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~------- 236 (391)
T TIGR01328 171 HSQGVKVIVDNTFATPMLTNP----VA---LGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDM------- 236 (391)
T ss_pred HHcCCEEEEECCCchhccCCc----hh---cCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhC-------
Confidence 999999999999985432211 11 24699999999999987753 3444555544433221110000
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
.+-.......|..++. .+.+..++++..++++++.+.|++.|+++-+
T Consensus 237 ----------~g~~l~~~~a~l~l~~--L~tl~~r~~~~~~na~~la~~L~~~p~v~~v 283 (391)
T TIGR01328 237 ----------TGSVISPFDAWLILRG--LKTLNIRMKRHSENAMKVAEYLKSHPAVEKV 283 (391)
T ss_pred ----------CCCCCCcHHHHHHHhC--cCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0111233445655553 4456778899999999999999999987654
No 103
>PLN02452 phosphoserine transaminase
Probab=99.71 E-value=2.1e-15 Score=155.73 Aligned_cols=339 Identities=13% Similarity=0.028 Sum_probs=210.7
Q ss_pred ccccccCCCCCCh-HHHHHHHHHhhccccc---c---ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeC
Q psy9807 90 PKFHAYFPTANSY-PAIVADILSDSIACIG---F---TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQG 162 (561)
Q Consensus 90 p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~---~---~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ 162 (561)
.|-+.|.|+|... +.++..+....+|-.. . ....+|.+.++-+++.+.|.++++.|+++ .-.++++
T Consensus 6 ~~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y-------~v~~l~G 78 (365)
T PLN02452 6 GRVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY-------EVLFLQG 78 (365)
T ss_pred CceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc-------eEEEEeC
Confidence 3445677766654 5677777766655221 1 12368889999999999999999998652 1345668
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEEeeC-CCC---ccChhhHH
Q psy9807 163 TASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLDLPK-EFL---ACSGGKGG 235 (561)
Q Consensus 163 ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v~~-~~g---~~d~~~Le 235 (561)
|||.++-.++...... ++++.+..+. ..+.+-+...|...+.... ... ..+++++
T Consensus 79 sgt~~~ea~~~nl~~~-----------------~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~- 140 (365)
T PLN02452 79 GASTQFAAIPLNLCKP-----------------GDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW- 140 (365)
T ss_pred ccHHHHHHHHHhcCCC-----------------CCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc-
Confidence 8888765544432110 1233333333 4445555444543333322 222 3455543
Q ss_pred HHHhhhchhhcCCceEEEEEecCCCCCcc-ccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeec
Q psy9807 236 GVIQRKSDREMCSDLLQVVATLGTTNCCA-FDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFN 314 (561)
Q Consensus 236 ~~i~~~~~~~~g~~p~~vv~t~gtt~tG~-idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~ 314 (561)
+. + ..+..|..++..|.+|. +.|++++++ +.+.||++.+.+....+ ++..+.+..+
T Consensus 141 ---~~--~----~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pid--------v~~~~v~~~s 197 (365)
T PLN02452 141 ---EL--T----PDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVD--------VSKYGVIYAG 197 (365)
T ss_pred ---CC--C----CCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccC--------HHHcCEEEEe
Confidence 32 1 13568999999999999 699988863 89999998775544332 1222455579
Q ss_pred CCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHH
Q psy9807 315 PHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRK 392 (561)
Q Consensus 315 ~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~ 392 (561)
+||.++ |.|.|++++|++.. .+.-...+.|+..... ..+.+...+-+ +....+-.+++++-.+ |++.+.++
T Consensus 198 aqK~lG-P~Gl~~v~vr~~~l-~~~~~~~~~~~~~~~~-----~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r 270 (365)
T PLN02452 198 AQKNVG-PSGVTIVIIRKDLI-GNARPITPGMLDYKIH-----AENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKR 270 (365)
T ss_pred cccccC-CCCeEEEEEcHHHH-hhcccCCCchhhHHHH-----HhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 999886 99999999977543 2221222333321100 00001111222 2345566777888776 89999999
Q ss_pred HHHHHHHHHHHHhcCCCeEEe-ccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHh
Q psy9807 393 QISLAKEFEQLVRSDDRFEVI-YEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLV 471 (561)
Q Consensus 393 ~~~la~~l~~~l~~~~g~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l 471 (561)
+.++++++++.|++.+||... .++..
T Consensus 271 ~~~~a~~l~~~l~~~~G~y~~~~~~~~----------------------------------------------------- 297 (365)
T PLN02452 271 NIRKADLLYDAIDESNGFYVCPVEKSV----------------------------------------------------- 297 (365)
T ss_pred HHHHHHHHHHHHHhCCCcccCCCChHH-----------------------------------------------------
Confidence 999999999999998787111 11000
Q ss_pred ccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 472 RSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 472 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
....+++|++.+. +...++.+.+.+.|.+...+-..-|. +|+|+.| ..+.++|++|++.+++-.+
T Consensus 298 -----------rs~~~vsF~~~~~-~~~~~f~~~~~~~g~~~~~G~r~~gg--~R~s~yn-a~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 298 -----------RSLMNVPFTLGGS-ELEAEFVKEAAKAGMVQLKGHRSVGG--MRASIYN-AMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred -----------hCCeEEEEEcCCc-hhHHHHHHHHHHCCCcccCCccccCc--eEEECcC-CCCHHHHHHHHHHHHHHHH
Confidence 0112355665444 36778999999999887665444443 9999876 5588899999999987644
No 104
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.70 E-value=1.7e-14 Score=164.23 Aligned_cols=355 Identities=11% Similarity=0.035 Sum_probs=206.9
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHH-HHHHHh-hccc--cccccccChhhHHHHHHHHH
Q psy9807 61 TAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIV-ADILSD-SIAC--IGFTWIASPACTELEVVMLD 136 (561)
Q Consensus 61 ~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~l~~-~~n~--~~~~~~~sp~~~~lE~~~~~ 136 (561)
.+|+ +.+-.++++.+.+.-..+.. ...|.|--.-+.-.|+++ -.++.. .|=+ .-+.-+.|...-+.-.+...
T Consensus 53 ~lp~-~~sE~e~~~~~~~la~~N~~---~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt 128 (954)
T PRK05367 53 DLPA-ALSEAEALAELRAIASKNKV---FRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQT 128 (954)
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCC---CCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHH
Confidence 4553 56788999998886443322 223433111112233433 223221 0000 11112234444455557788
Q ss_pred HHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-----chHHHH
Q psy9807 137 WLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-----TELEVV 211 (561)
Q Consensus 137 ~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-----~s~~ka 211 (561)
+++++.|++.. ...++.++|.+.-. +..++... + + -++++++..+. ..+..-
T Consensus 129 ~la~LtG~~~a---------naSl~d~aTAa~ea-~~~a~~~~--~----~-------~~~~vlv~~~~hP~~~~v~~t~ 185 (954)
T PRK05367 129 MVADLTGLEIA---------NASLLDEATAAAEA-MALAKRVS--K----S-------KSNRFFVDDDVHPQTLDVLRTR 185 (954)
T ss_pred HHHHHHCCChh---------hccccccHHHHHHH-HHHhhhhc--c----C-------CCCEEEEcCccCHHHHHHHHHH
Confidence 99999999864 56788888877543 33333221 0 0 01345555544 222333
Q ss_pred HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 212 MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 212 a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
+...|.+++.+|.+. |.+ .+ .. +.+....++.+|.+.|+++|+++||++|+++.||+.+.+.
T Consensus 186 a~~~G~ev~~~~~~~---d~~------~~--------~~-~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al 247 (954)
T PRK05367 186 AEPLGIEVVVGDAAK---ALD------HD--------DV-FGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLAL 247 (954)
T ss_pred HHhCCCEEEEecCcc---CCC------cc--------cE-EEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhc
Confidence 456788999998622 111 12 23 3345555889999999999999999999999999976433
Q ss_pred cccCccccccccCccccceeeecCCcc-----ccccccceeEEecChhhHHHhhccCCCccccC-CCCCCCCCC--cccc
Q psy9807 292 AFICPENRYLMKGVELADSFNFNPHKW-----MLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHD-QQGSAPDYR--HWQI 363 (561)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~HK~-----l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~-~~~~~~~~~--~~~~ 363 (561)
.++.+. +--.||+++.++||| +++| ++|++++|+. +.+.+. +..+... +..+...+. ..+.
T Consensus 248 ~~l~~p------ge~GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~--~~r~lp--grivG~s~d~~g~~~~~lalqtR 316 (954)
T PRK05367 248 TLLTPP------GEMGADIAVGSAQRFGVPMGFGGP-HAAYFAVRDA--YKRSMP--GRIVGVSVDAAGNPALRLALQTR 316 (954)
T ss_pred cCCCCh------hhcCCCEEEeeCcccCCCCCCCCC-CEEEEEECHH--HHhhCC--CCeeeeecccCCCcccccccccc
Confidence 333221 222569999999999 4455 4999999874 222221 1222110 001111111 0111
Q ss_pred cCcCCcc--------hHHH-----HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCcc
Q psy9807 364 PLGRRFR--------SLKL-----WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQI 430 (561)
Q Consensus 364 ~~sr~~~--------al~l-----w~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~ 430 (561)
+-..|+. +..+ ++.+.++|..|++++.++...++.++++.|++ +|+++..+.....++|
T Consensus 317 eqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~f~~~~~------- 388 (954)
T PRK05367 317 EQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDSFFDTLTV------- 388 (954)
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCCCCeEEE-------
Confidence 1122211 1122 23346689999999999999999999999987 5888876654455444
Q ss_pred ccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCC
Q psy9807 431 PLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNG 510 (561)
Q Consensus 431 ~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g 510 (561)
+.. . ...++.++|.+.|
T Consensus 389 ------------------------------------------------------------~~~-~--~~~~i~~~l~~~g 405 (954)
T PRK05367 389 ------------------------------------------------------------EVG-G--DAAAVLARALAAG 405 (954)
T ss_pred ------------------------------------------------------------eCC-C--CHHHHHHHHHHCC
Confidence 321 1 1457889998887
Q ss_pred cEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q psy9807 511 KIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIK 547 (561)
Q Consensus 511 ~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 547 (561)
... . . .....+|+|+. ..+|++||+++++++.
T Consensus 406 i~~-~--~-~~~~~l~is~~-e~~t~~did~l~~~l~ 437 (954)
T PRK05367 406 INL-R--R-VDDDHVGISLD-ETTTREDLAALLAVFG 437 (954)
T ss_pred cee-c--c-ccCCEEEEEec-ccCCHHHHHHHHHHHc
Confidence 654 1 1 12346999965 6779999999999996
No 105
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.70 E-value=2.8e-15 Score=157.20 Aligned_cols=220 Identities=13% Similarity=0.112 Sum_probs=141.5
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ ++++|.+ ..+++++|+.|+..++.+.... ++.+++.
T Consensus 59 ~~pt~~~Le~~l----A~l~G~~-----------~al~~~sG~~Ai~~~l~al~~~-----------------Gd~Vv~~ 106 (386)
T PRK06767 59 GNPTVKLFEERM----AVLEGGE-----------EALAFGSGMAAISATLIGFLKA-----------------GDHIICS 106 (386)
T ss_pred CCcchHHHHHHH----HHHhCCC-----------cEEEECCHHHHHHHHHHHHhCC-----------------CCEEEEc
Confidence 567777777755 7777764 4588899988876655442110 2234433
Q ss_pred cccch-HHHH----HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PACTE-LEVV----MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~~s-~~ka----a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
...|. .... +...+.++..++ ..|++++++++.+ .+.+|++...++.+|.+.|+++|+++|++
T Consensus 107 ~~~y~~~~~~~~~~~~~~gi~~~~~~----~~d~~~l~~~i~~--------~tklV~lesp~NptG~v~dl~~I~~la~~ 174 (386)
T PRK06767 107 NGLYGCTYGFLEVLEEKFMITHSFCD----METEADIENKIRP--------NTKLIFVETPINPTMKLIDLKQVIRVAKR 174 (386)
T ss_pred CCcHHHHHHHHHHHHhhcCeEEEEeC----CCCHHHHHHhhCc--------CceEEEEeCCCCCCceecCHHHHHHHHHH
Confidence 33221 1111 222344444444 3478889888866 46788888889999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
+|++++||+||+......| +. ..+|+++.+++|+++++.. .|+++.++. .+.+........+ ++
T Consensus 175 ~g~~vivD~a~a~~~~~~p----l~---~g~Div~~S~sK~l~g~g~~~gG~v~~~~~-~i~~~~~~~~~~~-----g~- 240 (386)
T PRK06767 175 NGLLVIVDNTFCSPYLQRP----LE---LGCDAVVHSATKYIGGHGDVVAGVTICKTR-ALAEKIRPMRKDI-----GG- 240 (386)
T ss_pred cCCEEEEECCCcccccCCc----hh---cCCcEEEecCcceecCCCCceeEEEEeChH-HHHHHHHHHHHHh-----CC-
Confidence 9999999999974332222 11 2459999999999988765 466665443 3322211100000 00
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
....+..|+.++.+. .+..++++..+++.++++.|+++|+++.+.
T Consensus 241 ------------~~~~~~a~l~~~~L~--tl~~r~~~~~~~a~~la~~L~~~p~v~~v~ 285 (386)
T PRK06767 241 ------------IMAPFDAWLLLRGLK--TLAVRMDRHCDNAEKIVSFLKNHDAVEGVW 285 (386)
T ss_pred ------------CCCHHHHHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHcCCCccEEE
Confidence 012344555554443 456788899999999999999999988654
No 106
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.70 E-value=2.4e-14 Score=152.61 Aligned_cols=192 Identities=14% Similarity=0.073 Sum_probs=126.6
Q ss_pred HHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 108 DILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAH 187 (561)
Q Consensus 108 ~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~ 187 (561)
+...+++..+...|..++...++++.+.+++ |.+ ..++|+|||+|+..++.+..+
T Consensus 61 ~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~----~~~-----------~vv~t~ggt~A~~~~~~all~---------- 115 (460)
T PRK13238 61 DRQWAAMMRGDEAYAGSRSYYRLEDAVKDIF----GYP-----------YTIPTHQGRAAEQILFPVLIK---------- 115 (460)
T ss_pred HHHHHHHHhCCcccCCCCCHHHHHHHHHHHh----CCC-----------cEEECCCHHHHHHHHHHHhCC----------
Confidence 3333333333446778888888988775555 443 469999999999887655311
Q ss_pred CCCCCcccccceEEecccc-hHHHHHHhccCCeEEeeC-C--------C--CccChhhHHHHHhhhchhhcCCceEEEEE
Q psy9807 188 PDWKDSDIIANLIASPACT-ELEVVMLDWLGKMLDLPK-E--------F--LACSGGKGGGVIQRKSDREMCSDLLQVVA 255 (561)
Q Consensus 188 ~~~~~~~~~~~~vv~~s~~-s~~kaa~~~g~~v~~v~~-~--------~--g~~d~~~Le~~i~~~~~~~~g~~p~~vv~ 255 (561)
+ + ++++....+ +....+.+.|++++.+|+ . . |.+|+++|++.|.+ .. ..++.+|++
T Consensus 116 p-------G-DVii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~--~~--~~~tk~Ivl 183 (460)
T PRK13238 116 K-------G-DVVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEE--VG--AENVPFIVM 183 (460)
T ss_pred C-------C-CEEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhh--cC--CCceeEEEE
Confidence 0 2 334333333 333345678999888887 3 2 34999999999975 21 124677888
Q ss_pred ecCCCCCc-cc---cCHHHHHHHHhhcCceEEechhccc-ccccCc----ccccc-ccC-----ccccceeeecCCcccc
Q psy9807 256 TLGTTNCC-AF---DCLEEIGQVCRQKDVWLHVDAAYAG-SAFICP----ENRYL-MKG-----VELADSFNFNPHKWML 320 (561)
Q Consensus 256 t~gtt~tG-~i---dpl~eI~~ia~~~~~~lhVDaA~gg-~~~~~~----~~~~~-~~g-----i~~aDsi~~~~HK~l~ 320 (561)
+..++.+| .+ +++++|+++|++||+++++|+|+.. ...+.. .+.+. +.. ...+|++++++||.++
T Consensus 184 ~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~ 263 (460)
T PRK13238 184 TITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAM 263 (460)
T ss_pred ecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCC
Confidence 87777776 33 5678999999999999999998743 222321 11111 111 1357999999999999
Q ss_pred ccccceeEEecChhhHH
Q psy9807 321 VTFDCSAMWLKDPSWVV 337 (561)
Q Consensus 321 ~P~g~g~l~~r~~~~l~ 337 (561)
+|.| |++.+++.+...
T Consensus 264 ~~~G-G~i~~~d~~l~~ 279 (460)
T PRK13238 264 VNIG-GLLCFRDEDLFT 279 (460)
T ss_pred Ccce-eEEEcChHHHHH
Confidence 9986 888887754443
No 107
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=7.3e-15 Score=155.39 Aligned_cols=236 Identities=11% Similarity=0.097 Sum_probs=149.1
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|...++|+.+ +++.|.. ..++|+|||.|+..++.+.. .. ++++++
T Consensus 61 ~~~p~~~~le~~l----A~l~g~~-----------~av~~sSGt~Al~~al~~ll----~~-------------Gd~Vi~ 108 (433)
T PRK08134 61 ISNPTVAVLEERV----AALEGGV-----------GAIATASGQAALHLAIATLM----GA-------------GSHIVA 108 (433)
T ss_pred CcChHHHHHHHHH----HHHhCCC-----------cEEEeCCHHHHHHHHHHHHh----CC-------------CCEEEE
Confidence 4567777777755 6777754 35999999999887776531 00 224444
Q ss_pred ecccc-hHHH----HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 202 SPACT-ELEV----VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 202 ~~s~~-s~~k----aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
....| +... .+...|++++.+++. |+++|+++|.+ ++.+|++++.++.+|.+.|+++|+++|+
T Consensus 109 ~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----d~~~l~~~i~~--------~TklV~~e~~~np~g~v~Di~~I~~la~ 176 (433)
T PRK08134 109 SSALYGGSHNLLHYTLRRFGIETTFVKPG----DIDGWRAAIRP--------NTRLLFGETLGNPGLEVLDIPTVAAIAH 176 (433)
T ss_pred eCCccHHHHHHHHHHHhhCCeEEEEECCC----CHHHHHHhcCC--------CCeEEEEECCCcccCcccCHHHHHHHHH
Confidence 44432 2222 223367788888743 79999999977 5678888888899999999999999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEecChhhH-HH--hh-ccCCCccccCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPSWV-VN--AF-NVDPLYLKHDQ 351 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l-~~--~~-~~~~~yl~~~~ 351 (561)
+||++++||++|+.+....| . .. .||.++.|+|||++++.. .|.+++...... .. .+ ...+.+...
T Consensus 177 ~~gi~livD~t~a~~~~~~p-l---~~---GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~-- 247 (433)
T PRK08134 177 EAGVPLLVDSTFTTPYLLRP-F---EH---GADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGF-- 247 (433)
T ss_pred HcCCEEEEECCCcccccCCc-h---hc---CCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccc--
Confidence 99999999999986554332 1 11 469999999999987753 555555322110 00 00 000010000
Q ss_pred CCCCCCCCc-------------ccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 352 QGSAPDYRH-------------WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 352 ~~~~~~~~~-------------~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
++.....+ .....+........|..++ |.+.+..++++..++|.++.+.|+++|.++-+
T Consensus 248 -~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~--gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V 319 (433)
T PRK08134 248 -HGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQ--GIETLPLRMERHVANTRKVVAFLASHPAVARV 319 (433)
T ss_pred -cccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 00000000 0001111233445554443 55568889999999999999999999887543
No 108
>PLN02271 serine hydroxymethyltransferase
Probab=99.69 E-value=4.3e-15 Score=156.50 Aligned_cols=261 Identities=11% Similarity=-0.002 Sum_probs=165.1
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
.......++|.-+++...++||++...+ +.-+-.-|||.||+.++.+.... +++++.
T Consensus 187 ~G~~~iD~iE~la~era~~lF~~~~~~~------gaNVQp~SGs~AN~aV~~ALl~P-----------------GD~IL~ 243 (586)
T PLN02271 187 TGNQYIDQIERLCCERALAAFGLDSEKW------GVNVQPYSCTSANFAVYTGLLLP-----------------GDRIMG 243 (586)
T ss_pred CCChhHHHHHHHHHHHHHHHhCCccccc------ccceeeccHHHHHHHHHHHhcCC-----------------CCEEEE
Confidence 3455667999999999999999875310 11255568999998887664211 234444
Q ss_pred eccc----chHH------HHHHhccCCeEEee--C--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC
Q psy9807 202 SPAC----TELE------VVMLDWLGKMLDLP--K--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC 267 (561)
Q Consensus 202 ~~s~----~s~~------kaa~~~g~~v~~v~--~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp 267 (561)
...+ .+.. +.+...|..+..+| + +++.+|.++|++.... . +|.+|++.+.... ..-|
T Consensus 244 ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~--~-----rPKLII~g~Sayp--r~~D 314 (586)
T PLN02271 244 LDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD--F-----RPKILICGGSSYP--REWD 314 (586)
T ss_pred ecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh--c-----CCeEEEECchhcc--CcCC
Confidence 3332 2211 11233455555665 4 5789999999985543 1 7888887443333 5679
Q ss_pred HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCcc
Q psy9807 268 LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYL 347 (561)
Q Consensus 268 l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl 347 (561)
+++|+++|+++|++++||+||..+.+....+... +..||+++++.||||.+|.| |++++++... ... .+...
T Consensus 315 ~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP---~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~--~~~--~g~~g 386 (586)
T PLN02271 315 YARFRQIADKCGAVLMCDMAHISGLVAAKECVNP---FDYCDIVTSTTHKSLRGPRG-GIIFYRKGPK--LRK--QGMLL 386 (586)
T ss_pred HHHHHHHHHHcCCEEEEECcccccccccCcCCCC---CcCCcEEEeCCcccCCCCCc-eEEEeccccc--ccc--cCCcc
Confidence 9999999999999999999999887755433222 33579999999999999999 8888865311 000 00000
Q ss_pred ccCCCCCCCCC-------CcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-ccc
Q psy9807 348 KHDQQGSAPDY-------RHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLM 418 (561)
Q Consensus 348 ~~~~~~~~~~~-------~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~ 418 (561)
........+++ .-.+++.+-.. ...++..+++......+.+..++..++|+.|++.|.+. |++++.. .+.
T Consensus 387 s~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdn 465 (586)
T PLN02271 387 SHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDN 465 (586)
T ss_pred ccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCc
Confidence 00000000000 00123333222 24455667777666677889999999999999999987 9998753 333
Q ss_pred cceee
Q psy9807 419 GLVCF 423 (561)
Q Consensus 419 ~~v~f 423 (561)
-+|..
T Consensus 466 HlvLv 470 (586)
T PLN02271 466 HLLLW 470 (586)
T ss_pred ceeee
Confidence 44443
No 109
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.69 E-value=9.6e-15 Score=152.29 Aligned_cols=223 Identities=13% Similarity=0.074 Sum_probs=148.5
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 119 FTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 119 ~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
++....|....+|+.+ +++.|.+ ..++++||++|+..++.+.... ++.
T Consensus 47 Y~R~~npt~~~Le~~l----A~leg~e-----------~ivvt~gg~~Ai~~~l~all~~-----------------Gd~ 94 (388)
T PRK08861 47 YTRSGNPNRGLLEQTL----SELESGK-----------GAVVTNCGTSALNLWVSALLGP-----------------DDL 94 (388)
T ss_pred ccCCCCchHHHHHHHH----HHHhCCC-----------eEEEECCHHHHHHHHHHHHcCC-----------------CCE
Confidence 3344567777888766 6666642 5799999999987776553110 123
Q ss_pred eEEecccch-HHHH----HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHH
Q psy9807 199 LIASPACTE-LEVV----MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQ 273 (561)
Q Consensus 199 ~vv~~s~~s-~~ka----a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ 273 (561)
+++....|. .... ....|.++..++ ..|++++++++.+ .+.+|+++..++.+|.+-|+++|++
T Consensus 95 Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd----~~d~e~l~~~i~~--------~tklV~lesP~NPtG~v~dl~~I~~ 162 (388)
T PRK08861 95 IVAPHDCYGGTYRLFNTRANKGDFKVQFVD----QSDAAALDAALAK--------KPKLILLETPSNPLVRVVDIAELCQ 162 (388)
T ss_pred EEEcCCchHHHHHHHHHHHhcCCeEEEEEC----CCCHHHHHHhcCc--------CCeEEEEECCCCCCCcccCHHHHHH
Confidence 443322232 2222 223455666665 4578899888866 5778888899999999999999999
Q ss_pred HHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
+|+++|++++||.+|+.+....| . -- .||.++.++|||+++|.+ .|++..++......... ...++
T Consensus 163 la~~~gi~vIvDea~~~~~~~~p-l---~~---GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~-~~~~~---- 230 (388)
T PRK08861 163 KAKAVGALVAVDNTFLTPVLQKP-L---EL---GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAW-WGNCI---- 230 (388)
T ss_pred HHHHcCCEEEEECCccccccCCC-c---cc---CCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHH-HHhcc----
Confidence 99999999999999986543322 1 11 469999999999999876 56666655433222110 00010
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+-.......|..++ |.+.+.-+++++.++|..+++.|+++|.++-+
T Consensus 231 --------------G~~~~p~~a~l~~r--gl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V 276 (388)
T PRK08861 231 --------------GATGTPFDSYMTLR--GIRTLGARMRVHEESAQQILAYLQTQSLVGTI 276 (388)
T ss_pred --------------CCCCChHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 11123344565444 45557778999999999999999999987543
No 110
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.69 E-value=1.5e-14 Score=151.80 Aligned_cols=221 Identities=12% Similarity=0.146 Sum_probs=147.4
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
....|...++|+. +++++|.+ ..++|+||++|+..++.+.... ++.++
T Consensus 57 r~~~p~~~~le~~----la~l~g~~-----------~~v~~ssG~~Ai~~al~al~~~-----------------Gd~Vi 104 (390)
T PRK08133 57 RFTNPTVTMFQER----LAALEGAE-----------ACVATASGMAAILAVVMALLQA-----------------GDHVV 104 (390)
T ss_pred CCCChHHHHHHHH----HHHHhCCC-----------cEEEECCHHHHHHHHHHHHhCC-----------------CCEEE
Confidence 3356666666664 57777764 3589999999998777653110 12344
Q ss_pred Eeccc----ch-HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 201 ASPAC----TE-LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 201 v~~s~----~s-~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+.... +. +.+.+...|++++.++. .|+++++++|.+ ++.+|+++..++.+|.+.|+++|+++|
T Consensus 105 ~~~~~y~~t~~~~~~~~~~~G~~v~~vd~----~d~~~l~~~i~~--------~tklV~ie~p~NptG~v~dl~~I~~la 172 (390)
T PRK08133 105 SSRSLFGSTVSLFEKIFARFGIETTFVDL----TDLDAWRAAVRP--------NTKLFFLETPSNPLTELADIAALAEIA 172 (390)
T ss_pred EccCcchhHHHHHHHHHHHcCcEEEEECC----CCHHHHHHhcCc--------CCeEEEEECCCCCCCCcCCHHHHHHHH
Confidence 43222 22 33345567888888884 378899888866 567888888889999999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
++||++++||.+|+......| ... .+|.++.++||+++.+.. .|.+++.+...+.... .++...
T Consensus 173 ~~~gi~livD~t~~~~~~~~p----l~~---g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~----~~~~~~---- 237 (390)
T PRK08133 173 HAAGALLVVDNCFCTPALQQP----LKL---GADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF----GFLRTA---- 237 (390)
T ss_pred HHcCCEEEEECCCcccccCCc----hhh---CCcEEEeecceeecCCcceEeEEEEcCHHHHHHHH----HHHHHh----
Confidence 999999999999875433222 111 359999999999987653 3444444443332221 111100
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+........|..++ |.+.+..++++..+++.++.+.|++.|+++-+
T Consensus 238 -----------g~~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v 283 (390)
T PRK08133 238 -----------GPTLSPFNAWVFLK--GLETLSLRMEAHSANALALAEWLEAHPGVERV 283 (390)
T ss_pred -----------CCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 01123344555544 45578888999999999999999999887654
No 111
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.69 E-value=1.7e-14 Score=149.86 Aligned_cols=288 Identities=10% Similarity=-0.023 Sum_probs=171.4
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE 209 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ 209 (561)
..++.+.+++++|.+ ..+++++|+++++.++.+... + ++.+++.... .+..
T Consensus 63 ~~~l~~~la~~~~~~-----------~~i~~~~G~~~~~~~l~~~~~----------~-------gd~v~~~~~~~~~~~ 114 (360)
T TIGR00858 63 HEELEEELAEWKGTE-----------AALLFSSGYLANVGVISALVG----------K-------GDLILSDALNHASLI 114 (360)
T ss_pred HHHHHHHHHHHhCCC-----------CEEEECchHHHHHHHHHHhCC----------C-------CCEEEEEccccHHHH
Confidence 344445556666654 347777788888765443210 0 1234443333 6666
Q ss_pred HHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 210 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 210 kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
.++...|.+++.++ .+|++.|++.+++ .. +.++.+|+.....+.+|.+.|+++|.++|++||+++++|++|+
T Consensus 115 ~~~~~~g~~~~~~~----~~d~~~l~~~~~~--~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~ 186 (360)
T TIGR00858 115 DGCRLSGARVRRYR----HNDVEHLERLLEK--NR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHG 186 (360)
T ss_pred HHHHhcCCceEEec----CCCHHHHHHHHHH--cc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECccc
Confidence 67777888888887 5789999998865 21 1135667777777889999999999999999999999999997
Q ss_pred cccccCcccccc--ccCc--cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccC
Q psy9807 290 GSAFICPENRYL--MKGV--ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPL 365 (561)
Q Consensus 290 g~~~~~~~~~~~--~~gi--~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (561)
.+.. ....... ..++ ...|++..++||+++.+ | |+++. ++............+.. ..
T Consensus 187 ~~~~-~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-g-G~~~~-~~~~~~~~~~~~~~~~~---------------~~ 247 (360)
T TIGR00858 187 TGVL-GEDGRGTLEHFGLKPEPVDIQVGTLSKALGSY-G-AYVAG-SQALIDYLINRARTLIF---------------ST 247 (360)
T ss_pred ccCc-CCCCCchHHhcCCCccCCcEEEEechhhhhcc-C-cEEEc-CHHHHHHHHHhCcccee---------------cC
Confidence 4322 1111110 1122 24588899999999753 3 55554 43333221111111110 00
Q ss_pred cC-CcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHH
Q psy9807 366 GR-RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFV 444 (561)
Q Consensus 366 sr-~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~ 444 (561)
+- ......+..+++.+. ..+++.++..++.+++.+.|++. ++++. ++..+.+.+.+.
T Consensus 248 ~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~------------------ 305 (360)
T TIGR00858 248 ALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIG------------------ 305 (360)
T ss_pred CCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeC------------------
Confidence 11 111222233343332 23566788889999999999886 56654 333444333221
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee---eECC
Q psy9807 445 LRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS---KIRD 521 (561)
Q Consensus 445 ~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~g 521 (561)
......++.+.|.+.|....... ...+
T Consensus 306 --------------------------------------------------~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~ 335 (360)
T TIGR00858 306 --------------------------------------------------DNASALALAEELQQQGIFVGAIRPPTVPAG 335 (360)
T ss_pred --------------------------------------------------CHHHHHHHHHHHHHCCeeEeeeCCCCCCCC
Confidence 11123467888888765543321 1234
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHH
Q psy9807 522 VYFLRMAVCSRYSESSDMIYSWNEI 546 (561)
Q Consensus 522 ~~~lR~~~~~~~t~~~di~~l~~~l 546 (561)
..++|+++.. .++++|+++++++|
T Consensus 336 ~~~iRis~~~-~~~~~~i~~~l~~l 359 (360)
T TIGR00858 336 TSRLRLTLSA-AHTPGDIDRLAEAL 359 (360)
T ss_pred CceEEEEEcC-CCCHHHHHHHHHhh
Confidence 5589999775 45788999999876
No 112
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.68 E-value=6.9e-15 Score=153.63 Aligned_cols=215 Identities=16% Similarity=0.153 Sum_probs=141.9
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+ .+++++|.+ ..+++++|+.|+..++. .+. . ++.+++.
T Consensus 45 ~~p~~~~le~----~la~l~g~~-----------~~l~~~sG~~al~~~l~-----ll~----~---------Gd~Vl~~ 91 (378)
T TIGR01329 45 GNPTRTALES----LLAKLDKAD-----------RAFAFSSGMAALDVITR-----LLN----N---------GDEIIAG 91 (378)
T ss_pred CChHHHHHHH----HHHHHhCCC-----------cEEEECCHHHHHHHHHH-----HhC----C---------CCEEEEc
Confidence 3455455555 567788874 35788888766533221 111 0 1234443
Q ss_pred ccc-chHH----HHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PAC-TELE----VVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~-~s~~----kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
... .+.. ..+...|++++.++. .|++++++++++ ++.+|+++..++.+|.+.|+++|+++|++
T Consensus 92 ~~~y~~~~~~~~~~~~~~G~~v~~vd~----~d~~~le~~i~~--------~tklv~le~psnptg~v~dl~~I~~la~~ 159 (378)
T TIGR01329 92 DDLYGGTDRLLTQVVPRSGVVVVHVDT----TDLDKVKAALGP--------KTKLVLLESPTNPLQKIVDIRKISEMAHA 159 (378)
T ss_pred CCCchHHHHHHHHHHHHcCcEEEEeCC----CCHHHHHHhcCc--------CceEEEEECCCCCCCeeecHHHHHHHHHH
Confidence 333 2222 234456888888884 478999998866 57789999999999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
||++++||+||+......| .. . .+|+++.++|||+++|.+ .|++++++.....+... +.... +
T Consensus 160 ~g~~vivD~a~~~~~~~~~-l~---~---g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~----~~~~~--G-- 224 (378)
T TIGR01329 160 QNALVVVDNTMMSPLLCNP-LE---L---GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYF----LQNST--G-- 224 (378)
T ss_pred cCCEEEEECCCcccccCCh-hh---c---CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHH----HHHhc--C--
Confidence 9999999999975433222 11 1 459999999999999977 88888877543222211 10000 0
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
........|..++ +.+.+..++++...++..+.+.|+++|.+
T Consensus 225 -----------~~~~~~~a~l~~~--~l~tl~~R~e~~~~na~~la~~L~~~~~v 266 (378)
T TIGR01329 225 -----------SGLAPFDCWLLLR--GIKTLAIRIEKQQENARAIAMFLSTHPRV 266 (378)
T ss_pred -----------CcCCHHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 0112223343333 44567888999999999999999988775
No 113
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.68 E-value=6.5e-15 Score=153.37 Aligned_cols=218 Identities=11% Similarity=0.072 Sum_probs=144.6
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
....|....+|+.+ +++.|.+ ..++++||+.|+..++.+.... ++.++
T Consensus 46 r~gnPt~~~lE~~l----A~l~g~~-----------~~~~~~sG~~Ai~~al~all~~-----------------GD~Vl 93 (377)
T TIGR01324 46 RRGTLTHFALQDAM----CELEGGA-----------GCYLYPSGLAAVTNSILAFVKA-----------------GDHVL 93 (377)
T ss_pred CCCCccHHHHHHHH----HHHhCCC-----------cEEEECcHHHHHHHHHHHhcCC-----------------CCEEE
Confidence 34568888888876 5556653 4689999999988777653110 22344
Q ss_pred Eecccc-hHHHH----HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 201 ASPACT-ELEVV----MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 201 v~~s~~-s~~ka----a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+....| ..... ....|.++..++.. +.+.+++++.+ ++.+|+.+..++.+|.+.||++|+++|
T Consensus 94 ~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~----~~e~l~~~i~~--------~tklV~lesp~Np~g~~~dl~~I~~la 161 (377)
T TIGR01324 94 MVDSAYEPTRYFCDIVLKRMGVDITYYDPL----IGEDIATLIQP--------NTKVLFLEAPSSITFEIQDIPAIAKAA 161 (377)
T ss_pred EcCCCcHHHHHHHHHHHHhcCcEEEEECCC----CHHHHHHhcCC--------CceEEEEECCCCCCCcHHHHHHHHHHH
Confidence 333332 22221 23356666666531 22778887766 577899999999999999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
++||+|+.||++|+.+....| +.. .+|.++.+.|||++++.+ .|++.. ++..+...... .++.
T Consensus 162 ~~~g~~livD~t~a~g~~~~p----l~~---gaDivv~S~tK~l~G~~d~~gG~v~~-~~~~~~~l~~~--~~~~----- 226 (377)
T TIGR01324 162 RNPGIVIMIDNTWAAGLLFKP----LEH---GVDISIQAGTKYLVGHSDIMIGTVVA-NARTWDQLREH--SYLM----- 226 (377)
T ss_pred HHcCCEEEEECCCccccccCc----ccc---CceEEEecCceeccCCCCceEEEEEe-CHHHHHHHHHH--HHHh-----
Confidence 999999999999987654332 112 459999999999998865 455554 43333222110 1111
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
+....+...|..++ |.+.+..+++++.++|..+++.|+++|.++
T Consensus 227 ------------G~~l~p~~a~~~~r--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~ 270 (377)
T TIGR01324 227 ------------GQMVDADDAYTTLR--GLRTLGVRLKQHQESSLAIAKWLSEQPEVA 270 (377)
T ss_pred ------------CCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 11123345566555 444566779999999999999999998774
No 114
>KOG1360|consensus
Probab=99.68 E-value=1e-14 Score=143.55 Aligned_cols=300 Identities=14% Similarity=-0.010 Sum_probs=206.5
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
+.-..+||+++ +++.+-+ ..++.++...||-..|...-.. .+...+|.
T Consensus 215 s~~hv~LE~eL----A~LHqK~-----------aALlFsSCfVANDstLftLak~-----------------lpgcei~S 262 (570)
T KOG1360|consen 215 SKHHVRLEAEL----ADLHQKE-----------AALLFSSCFVANDSTLFTLAKK-----------------LPGCEIFS 262 (570)
T ss_pred CchhhhHHHHH----HHHhcCc-----------ceeeeeeeeeccchHHHHHHHH-----------------CCCcEEec
Confidence 44456777765 6665554 4566777788887666553222 23456666
Q ss_pred cc---chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCc
Q psy9807 204 AC---TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDV 280 (561)
Q Consensus 204 s~---~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~ 280 (561)
.+ .|+..+.+-.++.-..+. +.|+++|++.|+.+ ....|++|......+++|++.||+||++++++||+
T Consensus 263 D~gNHASMI~GIrns~v~K~IFr----HND~~hL~~lL~~~----~~svPKivAFEtVhSM~GavcpleelcDvah~yGA 334 (570)
T KOG1360|consen 263 DEGNHASMIQGIRNSRVPKHIFR----HNDLDHLEQLLQSS----PKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGA 334 (570)
T ss_pred cccchHHHHHHhhhcCCcceeec----cCCHHHHHHHHHhC----CCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCc
Confidence 65 787777776666555555 89999999999872 23489999999999999999999999999999999
Q ss_pred eEEechhcccccccCccccccc--cCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCC
Q psy9807 281 WLHVDAAYAGSAFICPENRYLM--KGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPD 357 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~--~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (561)
...+|..|+.+ +..|...+.- +|+ .+.|.|+...-|.+++ .|..+......+....+..++|++..+
T Consensus 335 iTFlDEVHAVG-lYG~rGaGvgerdGvm~kvDiIsGTLgKafGc---VGGYIAat~~LvDmiRSyAaGFIFTTS------ 404 (570)
T KOG1360|consen 335 ITFLDEVHAVG-LYGPRGAGVGERDGVMHKVDIISGTLGKAFGC---VGGYIAATRKLVDMIRSYAAGFIFTTS------ 404 (570)
T ss_pred eeeeehhhhhc-cccCCCCCccccCCcchhhhhcccchhhhccc---ccceehhhhhHHHHHHHhcCceEEecC------
Confidence 99999988743 4444332211 222 4569999999998874 344444333333333355667766532
Q ss_pred CCcccccCcCCcch-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCcccccccc
Q psy9807 358 YRHWQIPLGRRFRS-LKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRF 436 (561)
Q Consensus 358 ~~~~~~~~sr~~~a-l~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~ 436 (561)
-+... .+...+.+.+..+.-....+.++++.+++++.|.+. |+.++..|..-+ -.
T Consensus 405 ---------LPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi~~pSHIi-Pv------------- 460 (570)
T KOG1360|consen 405 ---------LPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPVIPNPSHII-PV------------- 460 (570)
T ss_pred ---------CChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCcccCCCccee-ee-------------
Confidence 01111 123345566654444556677889999999999998 888876543322 11
Q ss_pred chhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEE-
Q psy9807 437 RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLV- 515 (561)
Q Consensus 437 ~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~- 515 (561)
+. ++..++.++.+.|..+..+++.
T Consensus 461 ------------------------------------------------------~v-gda~l~~~~sd~Li~~h~iYvQa 485 (570)
T KOG1360|consen 461 ------------------------------------------------------RV-GDAALAKQASDILISKHNIYVQA 485 (570)
T ss_pred ------------------------------------------------------ec-cCHHHHHHHHHHHHHhcCeEEEe
Confidence 11 4556788899999988778773
Q ss_pred ---eeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 516 ---PSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 516 ---~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
||+.+|...||+..+ |+-|++.++.+++++..+-+++
T Consensus 486 INyPTV~rG~E~LRiaPT-P~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 486 INYPTVARGTERLRIAPT-PHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred ccCCcccccceeeecCCC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 889999999999855 6668889999999988776553
No 115
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=7.9e-15 Score=155.00 Aligned_cols=238 Identities=13% Similarity=0.078 Sum_probs=145.1
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+. ++++.|.+ ..+++++|+.|+..++.+.. . . ++++++.
T Consensus 67 ~~pt~~~le~~----la~l~g~~-----------~~v~fsSG~~Ai~~al~~ll----~----~---------Gd~VI~~ 114 (437)
T PRK05613 67 TNPTVEALENR----IASLEGGV-----------HAVAFASGQAAETAAILNLA----G----A---------GDHIVTS 114 (437)
T ss_pred cChHHHHHHHH----HHHHhCCC-----------eEEEeCCHHHHHHHHHHHhc----C----C---------CCEEEEC
Confidence 55766666664 47777764 35888888888876665421 0 0 2234443
Q ss_pred ccc-chH----HHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PAC-TEL----EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~-~s~----~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
... .+. .+.+...|+++..++. ..|+++++++|.+ .+.+|+....++.+|.+.|+++|+++|++
T Consensus 115 ~~~y~~t~~~~~~~l~~~Gi~v~~vd~---~~d~e~l~~~l~~--------~tk~V~~e~~~Np~~~v~di~~I~~la~~ 183 (437)
T PRK05613 115 PRLYGGTETLFLVTLNRLGIEVTFVEN---PDDPESWQAAVQP--------NTKAFFGETFANPQADVLDIPAVAEVAHR 183 (437)
T ss_pred CCccHHHHHHHHHHHHhcCeEEEEECC---CCCHHHHHHhCCc--------cCeEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 323 222 2334456788888862 1278999999876 45667777778888999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhH-HHhh--ccCCCccccCC-C
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWV-VNAF--NVDPLYLKHDQ-Q 352 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l-~~~~--~~~~~yl~~~~-~ 352 (561)
+|+.++||++|+.+....|. .. .+|.++.|+||+++++. +.|.+++.+.... .... ....+++.... .
T Consensus 184 ~gi~livD~t~a~g~~~~p~----~~---GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (437)
T PRK05613 184 NQVPLIVDNTIATAALVRPL----EL---GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPA 256 (437)
T ss_pred cCCeEEEECCCccccccChH----Hh---CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccc
Confidence 99999999999765443221 12 35999999999998663 3466666332100 0000 00001110100 0
Q ss_pred CC-C--CCCC----------cccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 353 GS-A--PDYR----------HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 353 ~~-~--~~~~----------~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.. . .++. .+....+-...+...|+.++ |.+.+..+++++.++|.++++.|+++|.+.-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~ 327 (437)
T PRK05613 257 YHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQ--GLDTLSLRLERHNENAIKVAEFLNNHEKVAK 327 (437)
T ss_pred cccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcce
Confidence 00 0 0000 00111122234455565444 5556888999999999999999999998753
No 116
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.68 E-value=1.8e-14 Score=149.16 Aligned_cols=282 Identities=12% Similarity=0.034 Sum_probs=175.1
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccchH-HHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACTEL-EVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~s~-~ka 211 (561)
++++.+++++|.+++ ..++|+|+|+++..++.+... + ++++++....|+. ...
T Consensus 58 ~lr~~ia~~~~~~~~---------~i~~~~G~~~~l~~~~~~l~~----------~-------gd~v~~~~p~y~~~~~~ 111 (346)
T TIGR01141 58 ELKQALADYYGVDPE---------QILLGNGSDEIIELLIRAFLE----------P-------GDAVLVPPPTYSMYEIS 111 (346)
T ss_pred HHHHHHHHHhCcChH---------HEEEcCCHHHHHHHHHHHhcC----------C-------CCEEEEcCCCHHHHHHH
Confidence 455566777787543 578999998887554443210 0 1244444444443 345
Q ss_pred HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc--CceEEechhc
Q psy9807 212 MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK--DVWLHVDAAY 288 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~--~~~lhVDaA~ 288 (561)
+...|.+++.+|. .++.+|++.|++.+.+ .+.+|+.+..++.||.+-|++++.++|+.+ |+++++|++|
T Consensus 112 ~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y 183 (346)
T TIGR01141 112 AKIHGAEVVKVPLDEDGQLDLEDILVAIDD--------KPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAY 183 (346)
T ss_pred HHHcCCeEEEeccCCCCCCCHHHHHHhcCC--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECch
Confidence 6778999999999 7788999999997755 456777788889999999999999999887 9999999998
Q ss_pred ccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcC
Q psy9807 289 AGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGR 367 (561)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr 367 (561)
+... ..+.........+ .+.+..+++||++.| ..+|.++.+ +..+.........| .
T Consensus 184 ~~~~-~~~~~~~~~~~~~-~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~~---------------~----- 240 (346)
T TIGR01141 184 GEFS-GEPSTLPLLAEYP-NLIVLRTLSKAFGLAGLRIGYAIAN-AEIIDALNKVRAPF---------------N----- 240 (346)
T ss_pred hhhc-CCccHHHHHhhCC-CEEEEehhhHhhhchhhhceeeecC-HHHHHHHHhccCCC---------------C-----
Confidence 8422 1111111111111 245677889999655 347888774 33333211111111 0
Q ss_pred CcchHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHH
Q psy9807 368 RFRSLKLWFVLRLLGV-KYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLR 446 (561)
Q Consensus 368 ~~~al~lw~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~ 446 (561)
...+....+...+.. ..+.+..++..++.+++.+.|++.|++++. ++....+.|
T Consensus 241 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~----------------------- 295 (346)
T TIGR01141 241 -LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLI----------------------- 295 (346)
T ss_pred -CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEE-----------------------
Confidence 011222222223321 246777788888999999999988888754 333334333
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECC-EEEE
Q psy9807 447 LLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRD-VYFL 525 (561)
Q Consensus 447 ~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g-~~~l 525 (561)
.+.. ...++.++|.+.|..........+ ..++
T Consensus 296 --------------------------------------------~~~~---~~~~~~~~L~~~gI~v~~g~~f~~~~~~i 328 (346)
T TIGR01141 296 --------------------------------------------RFPR---DADALFEALLEKGIIVRDLNSYPGLPNCL 328 (346)
T ss_pred --------------------------------------------ecCC---CHHHHHHHHHHCCeEEEeCCCcCCCCCeE
Confidence 2221 135778888888754433322211 5689
Q ss_pred EEEecCCCCCHHHHHHHHHHHH
Q psy9807 526 RMAVCSRYSESSDMIYSWNEIK 547 (561)
Q Consensus 526 R~~~~~~~t~~~di~~l~~~l~ 547 (561)
|+++. +++|+++++++|+
T Consensus 329 Rls~~----~~~~i~~~~~~l~ 346 (346)
T TIGR01141 329 RITVG----TREENDRFLAALR 346 (346)
T ss_pred EEecC----CHHHHHHHHHHhC
Confidence 99854 5789999998763
No 117
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.68 E-value=3e-14 Score=149.50 Aligned_cols=249 Identities=14% Similarity=0.094 Sum_probs=149.3
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
..+|...++|+++ ++++|.+ ..++++|||+|+..++.+.. +. + ++++++
T Consensus 26 ~~g~~~~~le~~l----a~~~g~~-----------~~v~~~sgt~al~~~l~al~---~~------~-------Gd~Viv 74 (380)
T TIGR03588 26 TQGPTVPAFEEAL----AEYVGAK-----------YAVAFNSATSALHIACLALG---VG------P-------GDRVWT 74 (380)
T ss_pred cCChhHHHHHHHH----HHHHCCC-----------eEEEEcCHHHHHHHHHHHcC---CC------C-------CCEEEe
Confidence 3466667777765 5556654 24777889999877765531 00 0 224444
Q ss_pred eccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 202 SPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 202 ~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
.... .+...++...|.+++.+++ +++.+|+++|++.|.+ .. ...+.+|+.+. .+|...|+++|+++|++|
T Consensus 75 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~--~~--~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~ 147 (380)
T TIGR03588 75 TPITFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAA--AK--GKLPKAIVPVD---FAGKSVDMQAIAALAKKH 147 (380)
T ss_pred CCcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhc--cc--CCCceEEEEeC---CCCccCCHHHHHHHHHHc
Confidence 4444 5556677778999999998 4678999999999974 21 11455665543 478899999999999999
Q ss_pred CceEEechhcccccccCccccccccCccccceeeecCC--ccccccccceeEEecChhhHHHhh--ccCCCccccCC---
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPH--KWMLVTFDCSAMWLKDPSWVVNAF--NVDPLYLKHDQ--- 351 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~H--K~l~~P~g~g~l~~r~~~~l~~~~--~~~~~yl~~~~--- 351 (561)
|+++++|+||+.+..+.. +. +......|..++++| ||+..+ ..|++++.++....... .... ......
T Consensus 148 ~~~lI~D~a~a~g~~~~~--~~-~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g-~~~~~~~~~ 222 (380)
T TIGR03588 148 GLKIIEDASHALGAEYGG--KP-VGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHG-ITKDPLLFE 222 (380)
T ss_pred CCEEEEECCCcccCccCC--Ee-CCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCC-CCCCccccc
Confidence 999999999986543221 11 111124599999998 899765 45556665654333221 1111 000000
Q ss_pred --CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 352 --QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 352 --~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
......+....+...-+..-+.....+. ....+++++++..++++++.+.|.++|+++++.+
T Consensus 223 ~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~--qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~ 286 (380)
T TIGR03588 223 KQDEGPWYYEQQELGFNYRMTDIQAALGLS--QLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTI 286 (380)
T ss_pred ccccCcceeeeeccccccCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCC
Confidence 0000000000011111222222221222 2455888999999999999999999987775543
No 118
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.68 E-value=1.7e-16 Score=158.52 Aligned_cols=254 Identities=16% Similarity=0.062 Sum_probs=154.2
Q ss_pred hccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy9807 113 SIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKD 192 (561)
Q Consensus 113 ~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~ 192 (561)
..|..-..|..+|...++|+.+ +++||.+. .+|+++||+||.+++.+....
T Consensus 17 ~a~~gd~~Yg~D~~~~~l~~~i----~~l~g~e~-----------a~f~~sGT~An~~al~~~~~~-------------- 67 (290)
T PF01212_consen 17 AANVGDDAYGEDPTTARLEERI----AELFGKEA-----------ALFVPSGTMANQLALRAHLRP-------------- 67 (290)
T ss_dssp HTTSB-CCTTSSHHHHHHHHHH----HHHHTSSE-----------EEEESSHHHHHHHHHHHHHHT--------------
T ss_pred ccccCCcccCCChhHHHHHHHH----HHHcCCCE-----------EEEeCCCChHHHHHHHHHHhc--------------
Confidence 3444445799999988888866 77888874 489999999999999875521
Q ss_pred cccccceEEeccc--chHHHH--HHhccCCeEEeeCCC-CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC--ccc
Q psy9807 193 SDIIANLIASPAC--TELEVV--MLDWLGKMLDLPKEF-LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC--CAF 265 (561)
Q Consensus 193 ~~~~~~~vv~~s~--~s~~ka--a~~~g~~v~~v~~~~-g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t--G~i 265 (561)
.+.+++..+. +..+.. ..+.|.+++.++.++ |.+|+++|++.+.+ .......|.+|+.+. +|+. |.+
T Consensus 68 ---~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~--~~~h~~~~~~v~le~-t~~~~GG~~ 141 (290)
T PF01212_consen 68 ---GESVICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEE--HGAHHPQPAVVSLEN-TTELAGGTV 141 (290)
T ss_dssp ---TEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHH--HTGTSGGEEEEEEES-SBTTTTSB-
T ss_pred ---CCceeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhh--ccccCCCccEEEEEe-cCcCCCCee
Confidence 1223333222 222222 256889999999955 99999999999987 333233566666654 4444 665
Q ss_pred ---cCHHHHHHHHhhcCceEEechhcccccc--cCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhh
Q psy9807 266 ---DCLEEIGQVCRQKDVWLHVDAAYAGSAF--ICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAF 340 (561)
Q Consensus 266 ---dpl~eI~~ia~~~~~~lhVDaA~gg~~~--~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~ 340 (561)
+.|++|.++||+||+.+|+|||--+..+ .....+... ..+|+++++++|.++.|.|. +++-+++.+.+.+
T Consensus 142 ~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~tK~~g~~~Ga--vl~~~~~~i~~~~ 216 (290)
T PF01212_consen 142 YSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGTKNGGAPGGA--VLAGNKEFIAKAR 216 (290)
T ss_dssp --HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETTSTT-SSSEE--EEEESHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEEcccccccce--EEEechHHHHHHH
Confidence 5777788899999999999999433322 111223333 45699999999999988643 4444554443332
Q ss_pred ccCCCccccCCCCCCCCCCcccccCcCCcchHH---HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc
Q psy9807 341 NVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLK---LWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL 417 (561)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~---lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~ 417 (561)
.. ..++.. .. |....+. ++......+.+.+....++..++++++.+.|+.. ++.+..++.
T Consensus 217 ~~-~k~~gg----~~-----------~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~~~~~ 279 (290)
T PF01212_consen 217 RQ-RKRLGG----GM-----------RQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GGVLPRPVE 279 (290)
T ss_dssp HH-HHHHTH----HH-----------HHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEETTSS
T ss_pred HH-HHHhcc----Ce-----------eecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCC
Confidence 11 011100 00 0001111 1111111222223567788899999999999998 666777777
Q ss_pred ccceee
Q psy9807 418 MGLVCF 423 (561)
Q Consensus 418 ~~~v~f 423 (561)
++.+.+
T Consensus 280 tn~~~~ 285 (290)
T PF01212_consen 280 TNQVFV 285 (290)
T ss_dssp -HHHHH
T ss_pred CcEEeE
Confidence 777543
No 119
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.68 E-value=6e-15 Score=152.35 Aligned_cols=339 Identities=14% Similarity=-0.021 Sum_probs=204.4
Q ss_pred ChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHH
Q psy9807 101 SYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTM 180 (561)
Q Consensus 101 ~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~ 180 (561)
.+|.+..+.+.. ........+|.+.++.+++.+.|.++|+.|++. .-.++++|||.++-.++......
T Consensus 14 ~~~~~~~~~~~~---~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~-------~v~~l~GsGT~a~Eaa~~nl~~~-- 81 (374)
T TIGR01365 14 KRPGWSIEELKN---APLGRSHRSKLGKEKLAEAIKKTREMLGVPADY-------LIGIVPASDTGAVEMALWSMLGC-- 81 (374)
T ss_pred CCchhhHHHHhh---hhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCc-------EEEEECCchHHHHHHHHHHcCCC--
Confidence 466654444332 223333579999999999999999999987541 13467999999876655542110
Q ss_pred HHHHhcCCCCCCcccccceEEeccc--chHH-HHHHhccC-CeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEE
Q psy9807 181 QRVKEAHPDWKDSDIIANLIASPAC--TELE-VVMLDWLG-KMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVA 255 (561)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~-kaa~~~g~-~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~ 255 (561)
+ +.++++. .. ..+. +.++..|. ++..+.. ....+|++.++. ++ .|++
T Consensus 82 -~-------------g~~vLv~-g~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~~-----------~v~~ 133 (374)
T TIGR01365 82 -R-------------GVDVLAW-ESFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--KN-----------DVVF 133 (374)
T ss_pred -C-------------CCeEEEE-CHHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--CC-----------CEEE
Confidence 0 1134443 34 5555 77777788 5788877 666789998872 22 1679
Q ss_pred ecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhh
Q psy9807 256 TLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSW 335 (561)
Q Consensus 256 t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~ 335 (561)
++..|+||...|+++|+..+ ++..+.||+.=+.+....+ +++ +|.+..+.+|+|+.|.|.+++.++++..
T Consensus 134 vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~-----~d~---iDv~~tgsQK~L~~ppGls~v~vs~~Al 203 (374)
T TIGR01365 134 TWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLD-----YHK---LDVVTFSWQKVLGGEGAHGMLILSPRAV 203 (374)
T ss_pred ecCCCchheecccccccccc--CCCcEEEEccchhcCCCCC-----hhH---CcEEEEechhccCCCCceEEEEECHHHH
Confidence 99999999999998766432 5899999986433222221 122 4999999999999999999999987654
Q ss_pred HHHhhccCC-----CccccCCCCCC-CCCCcccccCcCCcchHHHHHHHH---HhhHH-HHHHHHHHHHHHHHHHHHHHh
Q psy9807 336 VVNAFNVDP-----LYLKHDQQGSA-PDYRHWQIPLGRRFRSLKLWFVLR---LLGVK-YLQEYIRKQISLAKEFEQLVR 405 (561)
Q Consensus 336 l~~~~~~~~-----~yl~~~~~~~~-~~~~~~~~~~sr~~~al~lw~~l~---~~g~~-g~~~~~~~~~~la~~l~~~l~ 405 (561)
-+ .-.... .|+.....+.. .+....+... ......+++..+ .+..+ |++.+.+++.++++.+++.++
T Consensus 204 ~~-~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~--TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~ 280 (374)
T TIGR01365 204 AR-LESYTPAWPLPKIFRLTKGGKLNKKIFEGSTIN--TPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVA 280 (374)
T ss_pred HH-HhhcCCCCCChhhhccccccchhhhhhcCCCCC--ChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 32 111111 12221110000 0000000011 112233444433 33454 899999999999999999999
Q ss_pred cCCCeEEecc-c--ccc-ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhh
Q psy9807 406 SDDRFEVIYE-V--LMG-LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 481 (561)
Q Consensus 406 ~~~g~~l~~~-~--~~~-~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~ 481 (561)
+...++++.. + .++ ++++++.+..+... +
T Consensus 281 ~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~---~-------------------------------------------- 313 (374)
T TIGR01365 281 KNNWIHFLAETPEIRSNTSVCLKVVDPAIDAL---D-------------------------------------------- 313 (374)
T ss_pred HCCCcccCCCChhhcCCCeEEEEeCCcccccc---c--------------------------------------------
Confidence 9843777653 1 122 22332211000000 0
Q ss_pred hhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 482 EVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 482 ~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
..+..+...++.+.|.+.|.++..+........+|++.+. ..+.+|++.+++.|.-+-
T Consensus 314 ----------~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G-~i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 314 ----------EDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGA-TVEKSDLECLCPWLDWAF 371 (374)
T ss_pred ----------cchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCC-cCCHHHHHHHHHHHHHHH
Confidence 0000011357888888887654433322223589999875 568889999999987553
No 120
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=1.5e-14 Score=152.92 Aligned_cols=239 Identities=14% Similarity=0.134 Sum_probs=147.3
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ +++.|.+ .++++++|+.|+..++.+.... ++.+++.
T Consensus 67 ~~p~~~~Le~~l----A~l~g~~-----------~av~~sSG~aAi~~al~all~~-----------------Gd~Vv~~ 114 (436)
T PRK07812 67 MNPTQDVVEQRI----AALEGGV-----------AALLLASGQAAETFAILNLAGA-----------------GDHIVSS 114 (436)
T ss_pred CCchHHHHHHHH----HHHhCCC-----------eEEEEccHHHHHHHHHHHHhCC-----------------CCEEEEe
Confidence 467777777755 7777765 3599999999987777543210 2345544
Q ss_pred cccc-hH----HHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PACT-EL----EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~~-s~----~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
.+.| .. .+.+...|.+++.++. ..|+++++++|.+ .+.+|++...++.+|.+.|+++|+++||+
T Consensus 115 ~~~y~~t~~~~~~~l~~~Gi~v~~vdd---~~d~e~l~~ai~~--------~tklV~ie~~sNp~G~v~Dl~~I~~la~~ 183 (436)
T PRK07812 115 PRLYGGTYNLFHYTLPKLGIEVSFVED---PDDLDAWRAAVRP--------NTKAFFAETISNPQIDVLDIPGVAEVAHE 183 (436)
T ss_pred CCcchHHHHHHHHHhhcCeEEEEEECC---CCCHHHHHHhCCC--------CCeEEEEECCCCCCCeecCHHHHHHHHHH
Confidence 4432 21 2223335666666641 2388888888866 56789999999999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEecChh-hHHHh-----hccCCCccccC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPS-WVVNA-----FNVDPLYLKHD 350 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~-~l~~~-----~~~~~~yl~~~ 350 (561)
||++++||++|+......| +.. .+|.++.++|||++++.+ .|.+++.... ..... ...++.|....
T Consensus 184 ~gi~liVD~t~a~~~~~~p----l~~---GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (436)
T PRK07812 184 AGVPLIVDNTIATPYLIRP----LEH---GADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVV 256 (436)
T ss_pred cCCEEEEECCCcccccCCc----hhc---CCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccch
Confidence 9999999999986443222 111 469999999999987642 5555553321 11000 01112221100
Q ss_pred CCC-CCCCC----C-cccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 351 QQG-SAPDY----R-HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 351 ~~~-~~~~~----~-~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
... ....+ . .+....+-.......|..++ |.+.+..+++++.++|.++.+.|+++|+++-+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V 323 (436)
T PRK07812 257 FAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQ--GLETLSLRIERHVANAQRVAEFLEARDEVASV 323 (436)
T ss_pred hhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 000 00000 0 00001112233455564443 56668889999999999999999999987543
No 121
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.67 E-value=8.8e-15 Score=159.91 Aligned_cols=232 Identities=12% Similarity=0.009 Sum_probs=157.4
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE 209 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ 209 (561)
-.++.+..|++||.+.+| ++++|.|.+|..++.++... ++.+++-... .|+.
T Consensus 176 i~eAq~~AA~~fgAd~ty----------FlvNGTS~gn~a~i~a~~~~-----------------Gd~VLvdRN~HKSv~ 228 (720)
T PRK13578 176 AKDAQKHAAKVFNADKTY----------FVLNGTSASNKVVTNALLTP-----------------GDLVLFDRNNHKSNH 228 (720)
T ss_pred HHHHHHHHHHHhCCCceE----------EEeCChhHHHHHHHHHhcCC-----------------CCEEEeecccHHHHH
Confidence 344556779999998764 77888888998888775322 2345555555 8999
Q ss_pred HH-HHhccCCeEEeeC--CC----CccChhh-----HHHHHhhh-chhhcCCceEEEEEecCCCCCccccCHHHHHHH-H
Q psy9807 210 VV-MLDWLGKMLDLPK--EF----LACSGGK-----GGGVIQRK-SDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV-C 275 (561)
Q Consensus 210 ka-a~~~g~~v~~v~~--~~----g~~d~~~-----Le~~i~~~-~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i-a 275 (561)
.+ +.+.|+..+.+++ +. +.++++. ++++|+++ .+++...+|+-.++....|+.|.+-++++|+++ |
T Consensus 229 hgaLiLsGa~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~ 308 (720)
T PRK13578 229 HGALIQAGATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIG 308 (720)
T ss_pred HHHHHHcCCeEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhh
Confidence 86 6889998888766 22 3456544 99999872 112223355334444457888999999999998 7
Q ss_pred hhcCceEEechhcccccccCccccccc--cCccccc----eeeecCCccccccccceeEEecChh-----------hHHH
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLM--KGVELAD----SFNFNPHKWMLVTFDCSAMWLKDPS-----------WVVN 338 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~--~gi~~aD----si~~~~HK~l~~P~g~g~l~~r~~~-----------~l~~ 338 (561)
+.++ .+|||.|||+.+.|.|.++.+- ..-..|| .++-|.||.|.+-..++++.+++.. .++.
T Consensus 309 h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~ 387 (720)
T PRK13578 309 HLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNN 387 (720)
T ss_pred ccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHH
Confidence 8888 9999999999998888644321 1123578 9999999999999999999997632 2222
Q ss_pred hhc----cCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHH----HHhhHHHHHHHHHHHHHHHHHHHHHH-hcCCC
Q psy9807 339 AFN----VDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVL----RLLGVKYLQEYIRKQISLAKEFEQLV-RSDDR 409 (561)
Q Consensus 339 ~~~----~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l----~~~g~~g~~~~~~~~~~la~~l~~~l-~~~~g 409 (561)
++. ++|.| .+.+++ +.+-...-++++++..+++..+++.| +.+++
T Consensus 388 al~m~qSTSPsY--------------------------~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~ 441 (720)
T PRK13578 388 AFMLHASTSPFY--------------------------PLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKL 441 (720)
T ss_pred HHHHHcCCChHH--------------------------HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 221 22222 122222 11222234567778888888899988 77889
Q ss_pred eEEeccc
Q psy9807 410 FEVIYEV 416 (561)
Q Consensus 410 ~~l~~~~ 416 (561)
|+++.+.
T Consensus 442 ~~~~~p~ 448 (720)
T PRK13578 442 IRPFIPP 448 (720)
T ss_pred eeecccc
Confidence 9888643
No 122
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.67 E-value=1.5e-14 Score=151.80 Aligned_cols=220 Identities=12% Similarity=0.080 Sum_probs=145.7
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
....|...++|+.+ ++++|.+ ..++++||+.|+..++.+.... ++.++
T Consensus 60 r~~~p~~~~le~~l----A~l~g~~-----------~~i~~ssG~~Ai~~~l~all~~-----------------GD~Vi 107 (398)
T PRK08249 60 RNTNPTVQAFEEKV----RILEGAE-----------AATAFSTGMAAISNTLYTFLKP-----------------GDRVV 107 (398)
T ss_pred CCCChHHHHHHHHH----HHHhCCC-----------eEEEeCChHHHHHHHHHHhcCC-----------------CCEEE
Confidence 35677777777755 7777764 3588888888877666542110 12344
Q ss_pred Eecccc----hHH-HHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 201 ASPACT----ELE-VVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 201 v~~s~~----s~~-kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+....| ++. ..+...|++++.++ ..|+++++++|++ ++.+|++...++.+|.+.|+++|+++|
T Consensus 108 ~~~~~y~~~~~~~~~~~~~~Gi~v~~vd----~~d~e~l~~~i~~--------~tklV~ie~p~NPtg~v~dl~~I~~la 175 (398)
T PRK08249 108 SIKDTYGGTNKIFTEFLPRMGVDVTLCE----TGDHEQIEAEIAK--------GCDLLYLETPTNPTLKIVDIERLAAAA 175 (398)
T ss_pred EcCCchHHHHHHHHHHHhhCCeEEEEcC----CCCHHHHHHhcCC--------CCeEEEEECCCCCCCccCCHHHHHHHH
Confidence 433332 222 23445677777666 4689999999866 466788888889999999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
++||++++||++|+......+ .. ..+|.++.+++|+++++.. .|.+++.++.......... .+
T Consensus 176 ~~~gi~livD~t~a~~~~~~~----l~---~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-~~-------- 239 (398)
T PRK08249 176 KKVGALVVVDNTFATPINQNP----LA---LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR-EI-------- 239 (398)
T ss_pred HHcCCEEEEECCcCccccCCc----hh---hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH-Hh--------
Confidence 999999999999985332211 11 2469999999999987653 3344555554433221110 00
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.+-.......|..++ +.+.+..++++..++++.+.+.|+++|.++-
T Consensus 240 ----------~g~~~s~~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~ 285 (398)
T PRK08249 240 ----------NGATMDPMSAYLILR--GMKTLKLRVRQQQESAMALAKYLQTHPKVEA 285 (398)
T ss_pred ----------cCCCCCHHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHHcCCCeeE
Confidence 011133445565554 4555778889999999999999999987763
No 123
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.67 E-value=5.9e-14 Score=147.27 Aligned_cols=295 Identities=11% Similarity=0.069 Sum_probs=172.6
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++++++++.+|.+++ ..++|+|+|+++..++.+... + ++.+++.... .....
T Consensus 69 ~~lr~~ia~~l~~~~~---------~v~~~~g~t~al~~~~~~~~~----------~-------gd~vl~~~p~y~~~~~ 122 (380)
T PRK06225 69 PELRELILKDLGLDDD---------EALITAGATESLYLVMRAFLS----------P-------GDNAVTPDPGYLIIDN 122 (380)
T ss_pred HHHHHHHHHhcCCCCC---------cEEEeCCHHHHHHHHHHHhcC----------C-------CCEEEEcCCCCcchHH
Confidence 4466777888888654 689999999998777655311 0 1234443333 44445
Q ss_pred HHHhccCCeEEeeC-C---CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHHHHhhcCceEE
Q psy9807 211 VMLDWLGKMLDLPK-E---FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~---~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~ia~~~~~~lh 283 (561)
++...|.+++.+|+ . ++.+|+++|++.+.+ .+.+|+.+...+.||.+- ++++|+++|++||++++
T Consensus 123 ~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii 194 (380)
T PRK06225 123 FASRFGAEVIEVPIYSEECNYKLTPELVKENMDE--------NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLL 194 (380)
T ss_pred HHHHhCceEEeeccccccCCccCCHHHHHhhcCC--------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEE
Confidence 66778889998886 2 468999999998866 355666666677889864 59999999999999999
Q ss_pred echhcccccccCccccccccCc-cccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcc
Q psy9807 284 VDAAYAGSAFICPENRYLMKGV-ELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHW 361 (561)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi-~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (561)
+|++|+.... .... ...+ .....+..+++|+++.|. -+|+++.+ +..+.. +.. +.... +
T Consensus 195 ~De~y~~~~~---~~~~-~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~-~~l~~~-~~~---~~~~~----------~ 255 (380)
T PRK06225 195 HDCTYRDFAR---EHTL-AAEYAPEHTVTSYSFSKIFGMAGLRIGAVVAT-PDLIEV-VKS---IVIND----------L 255 (380)
T ss_pred EehhHHHHhc---cCCc-hhhcCCCCEEEEeechhhcCCccceeEEEecC-HHHHHH-HHH---HHhcc----------c
Confidence 9999864221 1100 0011 122456668899996442 36888874 333332 211 00000 0
Q ss_pred cccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-ccccccceeeecccCccccccccchhh
Q psy9807 362 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI-YEVLMGLVCFRLKHWQIPLGRRFRSLK 440 (561)
Q Consensus 362 ~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~k 440 (561)
+ .+ ..........+.. ...-+++..+...++.+.+.+.|++++++.+. .++..+.+.+.+.+
T Consensus 256 ~--~~-~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~------------- 318 (380)
T PRK06225 256 G--TN-VIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISE------------- 318 (380)
T ss_pred C--CC-HHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccc-------------
Confidence 0 00 0111111122221 12223333444455667788888877775432 23333333322211
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeee--
Q psy9807 441 LWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSK-- 518 (561)
Q Consensus 441 ~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-- 518 (561)
.+....++.+.|.+.|.....+..
T Consensus 319 ------------------------------------------------------~~~~~~~l~~~l~~~gi~v~~g~~~~ 344 (380)
T PRK06225 319 ------------------------------------------------------AGIDPEDLVEYLLERKIFVRQGTYTS 344 (380)
T ss_pred ------------------------------------------------------ccCCHHHHHHHHHHCCEEEcCCcccC
Confidence 001134677888877754433211
Q ss_pred -ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 519 -IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 519 -~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
..+..++|+++.. ++++++++++.|+++.+++
T Consensus 345 ~~~~~~~iR~s~~~---~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 345 KRFGDRYIRVSFSI---PREQVEVFCEEFPDVVETL 377 (380)
T ss_pred cCCCCceEEEEeCC---CHHHHHHHHHHHHHHHHHh
Confidence 1245689999753 5789999999999887654
No 124
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.67 E-value=1.7e-14 Score=151.20 Aligned_cols=219 Identities=14% Similarity=0.108 Sum_probs=143.8
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ +++.|.+. +++++||+.|+..++.+.... ++++++.
T Consensus 59 ~~p~~~~Le~~l----A~~~g~~~-----------~i~~~sG~~Ai~~~l~all~~-----------------Gd~Vl~~ 106 (388)
T PRK07811 59 GNPTRTALEEQL----AALEGGAY-----------GRAFSSGMAATDCLLRAVLRP-----------------GDHIVIP 106 (388)
T ss_pred CCccHHHHHHHH----HHHhCCCc-----------eEEeCCHHHHHHHHHHHHhCC-----------------CCEEEEc
Confidence 457777777755 66666653 477788888887776553210 2344443
Q ss_pred cccch-HHHH-HH---hccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PACTE-LEVV-ML---DWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~~s-~~ka-a~---~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
...|. .... .. ..|+++..++ ..|+++|++++.+ ++.+|+++..++.+|.+.|+++|+++|++
T Consensus 107 ~~~y~~t~~~~~~~~~~~gi~~~~~d----~~d~e~l~~~i~~--------~tklV~ie~p~NPtg~~~dl~~I~~la~~ 174 (388)
T PRK07811 107 NDAYGGTFRLIDKVFTRWGVEYTPVD----LSDLDAVRAAITP--------RTKLIWVETPTNPLLSITDIAALAELAHD 174 (388)
T ss_pred CCCchHHHHHHHHhCcCCCeEEEEeC----CCCHHHHHHhcCc--------CCeEEEEECCCCCcceecCHHHHHHHHHH
Confidence 33332 2222 12 2355566665 3589999998866 56788888888889999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
||++++||++|+......| .. ..+|+++.+++|++++|.+ .|+++++++..... +. ++...
T Consensus 175 ~gi~lIvD~a~a~~~~~~p----~~---~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~-~~----~~~~~----- 237 (388)
T PRK07811 175 AGAKVVVDNTFASPYLQQP----LA---LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEA-FA----FLQNG----- 237 (388)
T ss_pred cCCEEEEECCCCccccCCc----hh---hCCcEEEecCceeecCCCCcEEEEEEECCHHHHHH-HH----HHHHh-----
Confidence 9999999999985433222 11 1469999999999998865 57777766543322 11 11000
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
.+.....+..|..++.+ +.+..++++..+++..+.+.|+++|+++-+
T Consensus 238 ---------~g~~~s~~~a~l~~~~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~V 284 (388)
T PRK07811 238 ---------AGAVPGPFDAYLTLRGL--KTLAVRMDRHSENAEAVAEFLAGHPEVSTV 284 (388)
T ss_pred ---------cCCCCCHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 00011233445554443 347778889999999999999999987644
No 125
>PRK05968 hypothetical protein; Provisional
Probab=99.66 E-value=1.3e-14 Score=152.18 Aligned_cols=220 Identities=11% Similarity=0.115 Sum_probs=144.8
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|...++|+.+ ++++|.+. .+++++|+.|+..++.+. +. . ++++++
T Consensus 60 ~~~p~~~~le~~l----A~l~g~~~-----------av~~~sG~~Ai~~al~al----~~----~---------Gd~Vl~ 107 (389)
T PRK05968 60 GDNPTVRAFEEML----AKLEGAED-----------ARGFASGMAAISSTVLSF----VE----P---------GDRIVA 107 (389)
T ss_pred CCChhHHHHHHHH----HHHhCCCc-----------EEEECCHHHHHHHHHHHH----hC----C---------CCEEEE
Confidence 3456666777655 77888753 477888998887766542 11 0 234444
Q ss_pred eccc----c-hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 202 SPAC----T-ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 202 ~~s~----~-s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
.... + .+.+.+...|++++.++ ..|++++++++ + .+.+|++...++.++.+.|+++|+++|+
T Consensus 108 ~~~~y~~t~~~~~~~~~~~G~~v~~vd----~~d~~~l~~~i-~--------~tklV~ie~pt~~~~~~~dl~~i~~la~ 174 (389)
T PRK05968 108 VRHVYPDAFRLFETILKRMGVEVDYVD----GRDEEAVAKAL-P--------GAKLLYLESPTSWVFELQDVAALAALAK 174 (389)
T ss_pred eCCCchHHHHHHHHHHHHcCceEEEeC----CCCHHHHHHhc-c--------cCCEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 4333 2 23345566788888887 33788888877 3 3456777777788888899999999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
+||++++||++|+......| ... .+|.++.++||++++|.+ .|+++ .++..+.+.......|+.
T Consensus 175 ~~gi~vivD~a~a~~~~~~p----~~~---g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g------ 240 (389)
T PRK05968 175 RHGVVTMIDNSWASPVFQRP----ITL---GVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLG------ 240 (389)
T ss_pred HcCCEEEEECCCcchhccCc----hhc---CCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCC------
Confidence 99999999999975432222 112 359999999999998865 46555 444433322211111110
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
-....+..|..++. .+.+..++++..++++++.+.|+++|+++.+.
T Consensus 241 ------------~~~~~~~A~~~l~~--L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~ 286 (389)
T PRK05968 241 ------------AKLSPFEAWLLLRG--LRTLPLRMKAHEASALEIARRLKAHPVVERVC 286 (389)
T ss_pred ------------CCCChHHHHHHHcc--cCcHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 01123444544443 44568889999999999999999999987654
No 126
>PRK10534 L-threonine aldolase; Provisional
Probab=99.66 E-value=2.1e-14 Score=147.89 Aligned_cols=310 Identities=14% Similarity=0.059 Sum_probs=176.3
Q ss_pred ChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHH
Q psy9807 101 SYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTM 180 (561)
Q Consensus 101 ~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~ 180 (561)
..|.+...+.. .. .+...|...|...++|+.+ ++.+|.++ .++++||+++++.++.+...
T Consensus 12 p~~~~~~a~~~-~~-~~~~~Y~~~~~~~~L~~~l----a~~~g~~~-----------~~v~~~g~~a~~~~l~~~~~--- 71 (333)
T PRK10534 12 PSRAMLEAMMA-AP-VGDDVYGDDPTVNALQDYA----AELSGKEA-----------ALFLPTGTQANLVALLSHCE--- 71 (333)
T ss_pred CCHHHHHHHHh-cc-CCCcccCCCHHHHHHHHHH----HHHhCCCe-----------EEEeCchHHHHHHHHHHhcC---
Confidence 33455544433 22 2222344677788888876 66678764 38999999999888775321
Q ss_pred HHHHhcCCCCCCcccccceEEecccc--hHHHH-HH-hccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEE
Q psy9807 181 QRVKEAHPDWKDSDIIANLIASPACT--ELEVV-ML-DWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVA 255 (561)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~vv~~s~~--s~~ka-a~-~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~ 255 (561)
+ ++.+++....+ +.... +. .++.+++.++. .++.+|+++|++++.+ ....+..+.+|++
T Consensus 72 -------~-------gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~--~~~~~~~~~lv~l 135 (333)
T PRK10534 72 -------R-------GEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKP--DDIHFARTRLLSL 135 (333)
T ss_pred -------C-------CCeeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcc--cCcCcccceEEEE
Confidence 0 12344332222 22211 23 33467777877 7889999999998854 2211113445555
Q ss_pred ecCCCCCccccCHHHH---HHHHhhcCceEEechhccccccc--CccccccccCccccceeeecCCccccccccceeEEe
Q psy9807 256 TLGTTNCCAFDCLEEI---GQVCRQKDVWLHVDAAYAGSAFI--CPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWL 330 (561)
Q Consensus 256 t~gtt~tG~idpl~eI---~~ia~~~~~~lhVDaA~gg~~~~--~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~ 330 (561)
. ++.+|.+.|.++| +++|++|++|++||+||.-.... ........ ...|.++++++|.++.+ .|.+.+
T Consensus 136 ~--np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~---~~~~~~~~s~SK~~~~~--~G~~~~ 208 (333)
T PRK10534 136 E--NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT---QYCDSFTICLSKGLGTP--VGSLLV 208 (333)
T ss_pred e--cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH---hcCCEEEEEeEcCCCCc--ccceEE
Confidence 4 4556999777665 56889999999999997621110 11111111 12476778999988876 565455
Q ss_pred cChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 331 KDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 331 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
.+++.+.........+ +. .. ...++...+++..+. ...+.+++..+..+++.+.|++. |+
T Consensus 209 ~~~~~i~~~~~~~~~~------~~---------~~--~~~~~~~a~~~~~l~--~~~~~~~~~~~~r~~l~~~L~~~-g~ 268 (333)
T PRK10534 209 GNRDYIKRARRWRKMT------GG---------GM--RQAGILAAAGLYALK--HNVARLQEDHDNAAWLAEQLREA-GA 268 (333)
T ss_pred cCHHHHHHHHHHHHHh------CC---------ch--hhHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 5665543322111111 00 00 011111222222221 12344455556678899999987 88
Q ss_pred EEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 411 EVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 411 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
++..+ ..+.+.+++.
T Consensus 269 ~~~~~-~~nfv~~~~~---------------------------------------------------------------- 283 (333)
T PRK10534 269 DVMRQ-DTNMLFVRVG---------------------------------------------------------------- 283 (333)
T ss_pred ccCCC-CceEEEEECC----------------------------------------------------------------
Confidence 76643 5555444321
Q ss_pred ecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+ ....++.+.|.+.|... .+. ..+|++.+ .+.++++++++++.|++..
T Consensus 284 ---~--~~~~~~~~~l~~~gi~v-~~~-----~~~rl~~~-~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 284 ---E--EQAAALGEYMRERNVLI-NAS-----PIVRLVTH-LDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred ---c--hhHHHHHHHHHHcCeee-cCC-----ceEEEEEE-eCCCHHHHHHHHHHHHHHh
Confidence 1 11346777888887554 322 15799864 5678999999999997653
No 127
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=2.5e-14 Score=148.66 Aligned_cols=221 Identities=10% Similarity=0.050 Sum_probs=151.5
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 119 FTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 119 ~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
++....|....+|+.+ +++-|.. .+++++||+.|+..++.+.... ++.
T Consensus 56 YsR~~nPt~~~le~~l----a~LEg~~-----------~a~~~~SGmaAi~~~~~~ll~~-----------------GD~ 103 (395)
T PRK08114 56 YGRRGTLTHFSLQEAM----CELEGGA-----------GCALYPCGAAAVANAILAFVEQ-----------------GDH 103 (395)
T ss_pred ccCCCChhHHHHHHHH----HHHhCCC-----------eEEEEhHHHHHHHHHHHHHcCC-----------------CCE
Confidence 3445778888899876 5554443 5688888999987766543110 224
Q ss_pred eEEeccc-chHHHH----HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHH
Q psy9807 199 LIASPAC-TELEVV----MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQ 273 (561)
Q Consensus 199 ~vv~~s~-~s~~ka----a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ 273 (561)
+++..+. .+..+. +...|+++..++ ..|.+.++++|++ ++.+|.+.+.++.+|.+.||++|++
T Consensus 104 Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd----~~d~~~l~~~l~~--------~TrlV~~EtpsNp~~~v~DI~~Ia~ 171 (395)
T PRK08114 104 VLMTGTAYEPTQDFCSKILSKLGVTTTWFD----PLIGADIAKLIQP--------NTKVVFLESPGSITMEVHDVPAIVA 171 (395)
T ss_pred EEEeCCCcHHHHHHHHHHHHhcCcEEEEEC----CCCHHHHHHhcCC--------CceEEEEECCCCCCCEeecHHHHHH
Confidence 4443333 233333 234678888887 4578889999876 5789999999999999999999999
Q ss_pred HHhhcC--ceEEechhcccccccCccccccccCccccceeeecCCccccccc--cceeEEecChhhHHHhhccCCCcccc
Q psy9807 274 VCRQKD--VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF--DCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 274 ia~~~~--~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~--g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
+||++| +.++||++|+.+..+-| .+ - .||++..+.|||++++. .+|+++.+ +..... +... .+.
T Consensus 172 ia~~~g~g~~lvVDnT~a~p~~~~p-l~---~---GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~~~-l~~~-~~~-- 239 (395)
T PRK08114 172 AVRSVNPDAVIMIDNTWAAGVLFKA-LD---F---GIDISIQAGTKYLVGHSDAMIGTAVAN-ARCWEQ-LREN-SYL-- 239 (395)
T ss_pred HHHHhCCCCEEEEECCCccccccCH-HH---c---CCcEEEEcCcccccCCCcceeEEEEcC-HHHHHH-HHHH-HHh--
Confidence 999985 99999999987554332 11 1 36999999999999995 77766553 322221 1100 000
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.+.-..+...|+.++ |.+.+.-+++++.++|..+.+.|+++|.++-
T Consensus 240 ---------------~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~va~~L~~hp~V~~ 285 (395)
T PRK08114 240 ---------------MGQMVDADTAYMTSR--GLRTLGVRLRQHEESSLKVAEWLAEHPEVAR 285 (395)
T ss_pred ---------------ccCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCEeE
Confidence 011134455665554 4445677899999999999999999998763
No 128
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=2.9e-14 Score=150.89 Aligned_cols=238 Identities=12% Similarity=0.101 Sum_probs=151.9
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
+....|....+|+.+ +++.|.+ ..++++||+.|+..++.+.... ++++
T Consensus 59 ~r~~~p~~~~Le~~l----A~leg~~-----------~al~~~sG~~Ai~~al~~ll~~-----------------GD~V 106 (431)
T PRK08248 59 TRIMNPTTDVFEKRI----AALEGGI-----------GALAVSSGQAAITYSILNIASA-----------------GDEI 106 (431)
T ss_pred ECCCCchHHHHHHHH----HHHhCCC-----------cEEEECCHHHHHHHHHHHHhCC-----------------CCEE
Confidence 334567777777755 7777754 4699999999987777553110 2344
Q ss_pred EEecccc-----hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH
Q psy9807 200 IASPACT-----ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 200 vv~~s~~-----s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
++....| .+...+...|++++.++. .|+++++++|.+ .+.+|+++..++.+|.+.|+++|+++
T Consensus 107 lv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~----~d~e~l~~ai~~--------~tklV~l~sp~NPtG~v~di~~I~~l 174 (431)
T PRK08248 107 VSSSSLYGGTYNLFAHTLPKLGITVKFVDP----SDPENFEAAITD--------KTKALFAETIGNPKGDVLDIEAVAAI 174 (431)
T ss_pred EEccCchhhHHHHHHHHHHhCCEEEEEECC----CCHHHHHHhcCC--------CCeEEEEECCCCCCCcccCHHHHHHH
Confidence 4444332 223445567888888883 588999998866 46678888888999999999999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEecChhhHHHhhccCCCc--cccCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLY--LKHDQ 351 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~y--l~~~~ 351 (561)
|+++|++++||++|+......| . .. .+|.++.++|||+++|.. +|.+++.+..... .....| +....
T Consensus 175 a~~~gi~vIvD~t~a~~~~~~p-l---~~---gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~---~~~~~~~~~~~~~ 244 (431)
T PRK08248 175 AHEHGIPLIVDNTFASPYLLRP-I---EH---GADIVVHSATKFIGGHGTSIGGVIVDSGKFDW---KGSGKFPGLTEPD 244 (431)
T ss_pred HHHcCCEEEEeCCCCccccCCh-h---Hc---CCCEEEEcCccccCCCCCceEEEEEeCCcccc---ccccccccccCCc
Confidence 9999999999999974332222 1 11 469999999999998863 6666664332110 000000 10000
Q ss_pred C--CCC--CC-C----------CcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 352 Q--GSA--PD-Y----------RHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 352 ~--~~~--~~-~----------~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
. ... .+ . ..+....+-...+...|+.++ |.+.+..+++++.++|.++++.|+++|+++-+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V 319 (431)
T PRK08248 245 PSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ--GLETLHLRMERHSENALAVAKFLEEHEAVEWV 319 (431)
T ss_pred cccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence 0 000 00 0 000001122234455565444 55557789999999999999999999987643
No 129
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=4.6e-14 Score=147.56 Aligned_cols=221 Identities=15% Similarity=0.087 Sum_probs=145.7
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
....|...++|+. ++++.|.+ ..++++||++++..++.+... + ++.++
T Consensus 48 R~~~pt~~~L~~~----lA~l~g~~-----------~~i~~~sg~~Ai~~~l~~l~~----------~-------GD~Vl 95 (386)
T PRK08045 48 RRGNPTRDVVQRA----LAELEGGA-----------GAVLTNTGMSAIHLVTTVFLK----------P-------GDLLV 95 (386)
T ss_pred CCCCccHHHHHHH----HHHHhCCC-----------eEEEECCHHHHHHHHHHHHcC----------C-------CCEEE
Confidence 3355666666664 46676643 468999999887666654211 0 12344
Q ss_pred Eecccch----HHHH-HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 201 ASPACTE----LEVV-MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 201 v~~s~~s----~~ka-a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+....|. +... +...+.++..++ ..|++++++++.+ .+.+|+++..++.+|.+-|+++|+++|
T Consensus 96 ~~~~~y~~~~~~~~~~~~~~gi~v~~vd----~~d~e~l~~~l~~--------~tklV~l~sP~NPtG~v~di~~I~~ia 163 (386)
T PRK08045 96 APHDCYGGSYRLFDSLAKRGCYRVLFVD----QGDEQALRAALAE--------KPKLVLVESPSNPLLRVVDIAKICHLA 163 (386)
T ss_pred EcCCCcHHHHHHHHHHHhhCCeEEEEeC----CCCHHHHHHhccc--------CCeEEEEECCCCCCCEecCHHHHHHHH
Confidence 3333332 2222 222344555554 4688999988866 567888889999999999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
+++|++++||.+|+.+....| +.. .+|.++.++|||++++.+ .|++..+++...... .....++
T Consensus 164 ~~~g~~vivDeay~~~~~~~p----l~~---gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l-~~~~~~~------ 229 (386)
T PRK08045 164 REAGAVSVVDNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTEL-AWWANNI------ 229 (386)
T ss_pred HHcCCEEEEECCCCccccCCc----hhh---CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHH-HHHHHhc------
Confidence 999999999999986533222 111 459999999999998876 676666565433222 1100111
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+-....+..|+.++.+. .+..+++++.+++..+.+.|+++|.++-+
T Consensus 230 ------------g~~~~p~~~~l~~rgl~--tl~~R~~~~~~na~~la~~L~~~p~v~~V 275 (386)
T PRK08045 230 ------------GVTGGAFDSYLLLRGLR--TLVPRMELAQRNAQAIVKYLQTQPLVKKL 275 (386)
T ss_pred ------------CCCCCHHHHHHHHhhhc--cHHHHHHHHHHHHHHHHHHHHcCCCEeEE
Confidence 00123445566665554 48889999999999999999999987543
No 130
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.65 E-value=8.8e-14 Score=143.39 Aligned_cols=210 Identities=13% Similarity=-0.031 Sum_probs=125.8
Q ss_pred HHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccc
Q psy9807 69 WQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEF 148 (561)
Q Consensus 69 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~ 148 (561)
.++.+..+++.+..+-.. .--.|+|.-..+... ....+.+... + ...++.+++.+.+++++|.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~-~~~~ylgl~~~~~~~-~~~~~~~~~~----~-------g~~~~~~~Le~~lA~~~g~~~e- 72 (346)
T TIGR03576 7 REKALEIIREKISRGGRD-SLYDLTGLAGGFKID-EEDLELLETY----V-------GPAIFEEKVQELGREHLGGPEE- 72 (346)
T ss_pred HHHHHHHHHHHHhccCCc-cccccccCCCChhHH-HHHHHHHHHh----c-------CCHHHHHHHHHHHHHHcCCCcc-
Confidence 466777777776554321 112466555322221 1222222222 1 1246777788888999999654
Q ss_pred cccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc----chHHHHHHhccCCeEEeeC
Q psy9807 149 LACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC----TELEVVMLDWLGKMLDLPK 224 (561)
Q Consensus 149 ~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~----~s~~kaa~~~g~~v~~v~~ 224 (561)
..++++||+++|..++.+..+. ++.+++..++ .++..++++.|+++...
T Consensus 73 --------~ilv~~gg~~a~~~~~~al~~~-----------------gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~-- 125 (346)
T TIGR03576 73 --------KILVFNRTSSAILATILALEPP-----------------GRKVVHYLPEKPAHPSIPRSCKLAGAEYFES-- 125 (346)
T ss_pred --------eEEEECCHHHHHHHHHHHhCCC-----------------CCEEEECCCCCCCchhHHHHHHHcCCEEecc--
Confidence 5799999999998877653211 2244443232 67778888888765332
Q ss_pred CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHHHHHhhcCceEEechhcccccccCcccccc
Q psy9807 225 EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL 301 (561)
Q Consensus 225 ~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~ 301 (561)
.|+++|+. + + .+.+|++ .|++++|.+ .||++|+++|++||+|++||.||+.+...... ...
T Consensus 126 ----~~l~~l~~-~-~--------~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~-~~~ 189 (346)
T TIGR03576 126 ----DELSELKK-I-D--------GTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYG-QPP 189 (346)
T ss_pred ----CCHHHHhh-C-c--------CceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCC-CCC
Confidence 23444321 1 1 2445555 467889998 89999999999999999999999864322100 111
Q ss_pred ccCccccceeeecCCccccccccceeEEecChhhHHH
Q psy9807 302 MKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVN 338 (561)
Q Consensus 302 ~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~ 338 (561)
.... .+|.++.+++|+|.++. .|+++. ++..+..
T Consensus 190 ~~~~-~~divv~s~SKalaG~r-~G~v~~-~~~li~~ 223 (346)
T TIGR03576 190 ALDL-GADLVVTSTDKLMDGPR-GGLLAG-RKELVDK 223 (346)
T ss_pred HHHc-CCcEEEeccchhccccc-eEEEEe-CHHHHHH
Confidence 1011 25899999999885554 355554 5444443
No 131
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=4.9e-14 Score=148.20 Aligned_cols=221 Identities=16% Similarity=0.104 Sum_probs=146.6
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
+....|...++|+ .++++.|.+ ..+++++|+.|+..++.+. +. + ++.+
T Consensus 55 ~R~~~p~~~~Le~----~lA~l~g~~-----------~~v~~~sG~~Ai~~~l~al----l~------p-------GD~V 102 (405)
T PRK08776 55 TRSGNPTRDLLGE----ALAELEGGA-----------GGVITATGMGAINLVLNAL----LQ------P-------GDTL 102 (405)
T ss_pred cCCCChHHHHHHH----HHHHHhCCC-----------ceEEEcCHHHHHHHHHHHH----hC------C-------CCEE
Confidence 3345566566665 557777764 3588999987775554432 11 0 2344
Q ss_pred EEecccch-----HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH
Q psy9807 200 IASPACTE-----LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 200 vv~~s~~s-----~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
++....|. +...+...|.+++.++ ..|+++|++++++ .+.+|+++..++.+|.+.|+++|+++
T Consensus 103 vv~~p~Y~~t~~~~~~~~~~~g~~v~~v~----~~d~~~l~~~i~~--------~tklV~l~~P~NPtG~v~dl~~I~~l 170 (405)
T PRK08776 103 VVPHDAYGGSWRLFNALAKKGHFALITAD----LTDPRSLADALAQ--------SPKLVLIETPSNPLLRITDLRFVIEA 170 (405)
T ss_pred EEccCCchHHHHHHHHHHHhcCcEEEEEC----CCCHHHHHHhcCc--------CCeEEEEECCCCCCCccCCHHHHHHH
Confidence 44333332 2333444566777776 3578899988865 46778888888999999999999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQ 352 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 352 (561)
|+++|++++||++|+......| . . -.+|.+..++||++++|.+ .|++..++.+...+... ...+.
T Consensus 171 a~~~gi~vIvD~a~a~~~~~~p----l-~--~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~-~~~~~----- 237 (405)
T PRK08776 171 AHKVGALTVVDNTFLSPALQKP----L-E--FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVW-WANAL----- 237 (405)
T ss_pred HHHcCCEEEEECCCcccccCCc----c-c--ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHH-HHHhc-----
Confidence 9999999999999975432211 1 1 1469999999999998865 56666666543332211 00000
Q ss_pred CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 353 GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 353 ~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
+-....+..|..+ .|.+.++.++++..+++..+.+.|++.|.+.-
T Consensus 238 -------------g~~~s~~~a~l~~--~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~ 282 (405)
T PRK08776 238 -------------GLTGSPFDAFLTL--RGLRTLDARLRVHQENADAIAALLDGHAAVNQ 282 (405)
T ss_pred -------------CCCCCHHHHHHHH--hhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeE
Confidence 0012345566555 45667888999999999999999999987753
No 132
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.65 E-value=5.5e-14 Score=153.60 Aligned_cols=229 Identities=15% Similarity=0.129 Sum_probs=156.0
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE 209 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ 209 (561)
-.++.+..|+.||.+.+| ++++|.|.+|..++.++... ++.+++-... .|+.
T Consensus 197 i~eAe~~aA~~fgAd~ty----------fvvNGTS~~n~av~~a~~~~-----------------Gd~VLvdRN~HKSv~ 249 (713)
T PRK15399 197 HLEAEEYIARTFGAEQSY----------IVTNGTSTSNKIVGMYAAPA-----------------GSTLLIDRNCHKSLA 249 (713)
T ss_pred HHHHHHHHHHHhCCCcEE----------EEeCChHHHHHHHHHHhcCC-----------------CCEEEeecccHHHHH
Confidence 344455679999998763 67788888998888775321 2345555555 8999
Q ss_pred HHHHhccCCeEEeeC--C-C---CccCh-----hhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 210 VVMLDWLGKMLDLPK--E-F---LACSG-----GKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 210 kaa~~~g~~v~~v~~--~-~---g~~d~-----~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
.++.+.|+..+.+++ + . +.+++ +.++++|++ .... .+|+.+++|. .|+.|.+-++++|+++|
T Consensus 250 ~aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~--~p~~-~~p~~vvit~-pTYdGi~yd~~~I~~~~--- 322 (713)
T PRK15399 250 HLLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAA--TTQA-QWPVHAVITN-STYDGLLYNTDWIKQTL--- 322 (713)
T ss_pred HHHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHh--CCCc-CCceEEEEEC-CCCCceeeCHHHHHHHh---
Confidence 999999999888866 2 2 34565 899999987 3222 3677777766 48889999999999999
Q ss_pred CceE-EechhcccccccCccccc--cccCcccccee---eecCCccccccccceeEEecCh---hhHHHhhc----cCCC
Q psy9807 279 DVWL-HVDAAYAGSAFICPENRY--LMKGVELADSF---NFNPHKWMLVTFDCSAMWLKDP---SWVVNAFN----VDPL 345 (561)
Q Consensus 279 ~~~l-hVDaA~gg~~~~~~~~~~--~~~gi~~aDsi---~~~~HK~l~~P~g~g~l~~r~~---~~l~~~~~----~~~~ 345 (561)
|+.+ |||.|||+.+.|.|.++. .+.+...+|.+ +-|.||.|.+-..++++.++.. ..++.++. ++|.
T Consensus 323 g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPs 402 (713)
T PRK15399 323 DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPS 402 (713)
T ss_pred CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHHHHcCCCcH
Confidence 6665 899999999888875542 22222246777 9999999999999999999753 22223221 2222
Q ss_pred ccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEecc
Q psy9807 346 YLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR------FEVIYE 415 (561)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g------~~l~~~ 415 (561)
|+-. .++-+ +.+.+....-++++++..+++..+++.+.++.+ |+++.+
T Consensus 403 Y~Lm--------------------ASLD~--a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~ 456 (713)
T PRK15399 403 YPIV--------------------ASVET--AAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQP 456 (713)
T ss_pred HHHH--------------------HHHHH--HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCc
Confidence 2110 11111 112222223456778888889999999988766 677754
No 133
>PLN02509 cystathionine beta-lyase
Probab=99.65 E-value=3.1e-14 Score=150.96 Aligned_cols=161 Identities=16% Similarity=0.147 Sum_probs=116.8
Q ss_pred HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 212 MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 212 a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
+...|++++.++ ..|+++++++|.+ .+.+|+++..++.+|.+.|+++|+++|++||++++||.||+.+
T Consensus 192 l~~~G~~v~~vd----~~d~e~l~~ai~~--------~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~ 259 (464)
T PLN02509 192 VPRSGVVVKRVN----TTNLDEVAAAIGP--------QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSP 259 (464)
T ss_pred HHHCCeEEEEeC----CCCHHHHHHhCCc--------CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccc
Confidence 345677777776 4468888888865 5678999999999999999999999999999999999999865
Q ss_pred cccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc
Q psy9807 292 AFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF 369 (561)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~ 369 (561)
....| .. ..+|.++.++|||+++|.+ .|++++++......... +... . +..+
T Consensus 260 ~~~~p----l~---~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~-----~~~~-~-------------g~~l 313 (464)
T PLN02509 260 VLSRP----LE---LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF-----LQNS-E-------------GSGL 313 (464)
T ss_pred ccCCh----hh---cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH-----HHHh-c-------------CCCc
Confidence 43222 11 1469999999999999876 78888766543222110 0000 0 0112
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 370 RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 370 ~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.....|+.++. .+.+..++++..++|+++.+.|+++|.++-
T Consensus 314 ~p~~A~l~lr~--L~tL~~R~~r~~~nA~~la~~L~~~p~V~~ 354 (464)
T PLN02509 314 APFDCWLCLRG--IKTMALRIEKQQENARKIAMYLSSHPRVKK 354 (464)
T ss_pred CHHHHHHHHhh--hhhHHHHHHHHHHHHHHHHHHHhcCCCccE
Confidence 34445655554 445788999999999999999999998753
No 134
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=2.9e-14 Score=149.62 Aligned_cols=223 Identities=14% Similarity=0.071 Sum_probs=149.2
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
+....|...++|+.+ +++.|.+ .+++++|||+|+..++.+.... ++.+
T Consensus 60 ~r~~~pt~~~Le~~l----A~l~g~~-----------~~l~~~sgt~Ai~~~l~al~~~-----------------GD~V 107 (394)
T PRK07050 60 GLHATPTSLALAQRL----AEIEGGR-----------HALLQPSGLAAISLVYFGLVKA-----------------GDDV 107 (394)
T ss_pred CCCCCHHHHHHHHHH----HHHhCCC-----------eEEEeccHHHHHHHHHHHHhCC-----------------CCEE
Confidence 344556666676644 7777753 4689999999998877654110 2344
Q ss_pred EEecccch-----HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH
Q psy9807 200 IASPACTE-----LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 200 vv~~s~~s-----~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
++....|. +...+...|++++.++.. +.+.++++|.+ ++.+|+++..++.+|.+.|+++|+++
T Consensus 108 l~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~----~~~~l~~~i~~--------~tklV~le~p~Np~~~~~di~~I~~i 175 (394)
T PRK07050 108 LIPDNAYGPNRDHGEWLARDFGITVRFYDPL----IGAGIADLIQP--------NTRLIWLEAPGSVTMEVPDVPAITAA 175 (394)
T ss_pred EEecCCcccHHHHHHHHHHhcCeEEEEECCC----CHHHHHHhcCC--------CCeEEEEECCCCCCccHhhHHHHHHH
Confidence 44443321 223445678888887742 44678888766 56788888888889999999999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQ 352 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 352 (561)
|+++|+++++|+||+.+....| +.. .+|+++.+++|++++..+ .|++++++++...+.... ..++
T Consensus 176 a~~~gi~livD~a~a~~~~~~~----l~~---GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~-~~~~----- 242 (394)
T PRK07050 176 ARARGVVTAIDNTYSAGLAFKP----FEH---GVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLA-RMRL----- 242 (394)
T ss_pred HHHcCCEEEEECCcccccccCH----HHc---CCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHH-HHhc-----
Confidence 9999999999999986543322 112 359999999999986654 566777666543332110 0010
Q ss_pred CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 353 GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 353 ~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
+. ...+...|.+++ |...+..+++++.++|.++.+.|+++|++.-+.
T Consensus 243 G~-------------~~~~~~a~l~lr--~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~ 289 (394)
T PRK07050 243 GI-------------GVSADDCSLVLR--GLPSLQVRLAAHDRSALEVAEWLKARPEIATVL 289 (394)
T ss_pred CC-------------CCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 00 123344465554 344566788999999999999999998876544
No 135
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=6.8e-14 Score=145.83 Aligned_cols=218 Identities=10% Similarity=0.086 Sum_probs=143.8
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|...++|+.+. ++.|.. ..++++||++|+..++.+..+. ++++++
T Consensus 58 ~~npt~~~Le~~iA----~le~~~-----------~~~~~~sG~~Ai~~~l~all~~-----------------GD~Vvv 105 (394)
T PRK09028 58 RGTPTHFAFQAAIV----ELEGGA-----------GTALYPSGAAAISNALLSFLKA-----------------GDHLLM 105 (394)
T ss_pred CCCchHHHHHHHHH----HHhCCC-----------cEEEECCHHHHHHHHHHHHhCC-----------------CCEEEE
Confidence 34676677887664 443432 4689999999987776553110 234555
Q ss_pred ecccc-hHHHH----HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 202 SPACT-ELEVV----MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 202 ~~s~~-s~~ka----a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
....| +.... ....|+++..++. .+.+.+++.+.+ ++.+|+++..++.+|.+.|+++|+++||
T Consensus 106 ~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~----~~~e~l~~~l~~--------~TklV~lespsNPtg~v~dl~~I~~la~ 173 (394)
T PRK09028 106 VDSCYEPTRDLCDKILKGFGIETTYYDP----MIGEGIRELIRP--------NTKVLFLESPGSITMEVQDVPTLSRIAH 173 (394)
T ss_pred ECCCcHHHHHHHHHhhhhcceEEEEECC----CCHHHHHHhcCc--------CceEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 44443 33322 2335666766652 245778887765 5778999999999999999999999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
+||+++.||.+|+.....-|- -- .||.+..+.|||++++.+ .|++ +.++......... ..+
T Consensus 174 ~~g~~lvvD~t~a~p~~~~Pl----~~---GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~~~l~~~-~~~-------- 236 (394)
T PRK09028 174 EHDIVVMLDNTWASPINSRPF----EM---GVDISIQAATKYIVGHSDVMLGTA-TANEKHWDQLREH-SYL-------- 236 (394)
T ss_pred HcCCEEEEECCccccccCCcc----cc---CceEEEEeCCeEecCCCCEEEEEE-ECCHHHHHHHHHH-HHh--------
Confidence 999999999999865433331 11 469999999999998832 3433 4444332221100 000
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.+.-..+...|..++ |...+.-+++++.++|..+.+.|+++|.++-
T Consensus 237 ----------~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~la~~L~~~p~v~~ 282 (394)
T PRK09028 237 ----------MGQCTSPDDVYLAMR--GLRTLGVRLAQHEKNALKVANWLATRPEVDH 282 (394)
T ss_pred ----------cCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccE
Confidence 011134455665554 4455777999999999999999999998753
No 136
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=3.1e-14 Score=148.89 Aligned_cols=220 Identities=14% Similarity=0.073 Sum_probs=144.4
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
....|...++|+.+ ++++|.+ ..++++||+.|+..++.+.... ++.++
T Consensus 49 r~~np~~~~lE~~l----A~l~g~~-----------~~l~~~sG~~Ai~~~l~~ll~~-----------------GD~Vl 96 (385)
T PRK08574 49 REENPTLRPLEEAL----AKLEGGV-----------DALAFNSGMAAISTLFFSLLKA-----------------GDRVV 96 (385)
T ss_pred CCCCccHHHHHHHH----HHHhCCC-----------cEEEeCCHHHHHHHHHHHHhCC-----------------CCEEE
Confidence 34567778888866 7777764 4588899999988776643110 12344
Q ss_pred Eeccc-chHHHHH---HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 201 ASPAC-TELEVVM---LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 201 v~~s~-~s~~kaa---~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
+.... .+....+ ...|++++.++ +|+++|+++|.+ . ++.+|++...++.+|.+-|+++|+++|+
T Consensus 97 v~~~~y~~~~~~~~~~~~~g~~v~~~~-----~d~~~l~~~i~~--~-----~tklV~ie~p~NPtG~v~dl~~I~~la~ 164 (385)
T PRK08574 97 LPMEAYGTTLRLLKSLEKFGVKVVLAY-----PSTEDIIEAIKE--G-----RTKLVFIETMTNPTLKVIDVPEVAKAAK 164 (385)
T ss_pred EcCCCchhHHHHHHHhhccCcEEEEEC-----CCHHHHHHhcCc--c-----CceEEEEECCCCCCCEecCHHHHHHHHH
Confidence 43333 3333333 23355555443 367888888754 1 4567888888999999999999999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
++|++++||++|+.+....+ +.. .+|.++.++||++++|.+ .|++.+.+........... .++
T Consensus 165 ~~gi~livD~t~a~~~~~~~----l~~---GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~-~~~------- 229 (385)
T PRK08574 165 ELGAILVVDNTFATPLLYRP----LRH---GADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR-RRL------- 229 (385)
T ss_pred HcCCEEEEECCCCccccCCh----hhh---CCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH-Hhc-------
Confidence 99999999999975433222 112 359999999999998865 3556666654333221110 000
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
+-....+..|..++. .+.+..++++..+++.++.+.|++.|.++-
T Consensus 230 -----------g~~~~p~~a~l~l~~--l~tL~~R~~~~~~na~~la~~L~~~p~v~~ 274 (385)
T PRK08574 230 -----------GTIMQPFEAYLVLRG--LKTLEVRFERQCRNAMAIAEFLSEHPKVAE 274 (385)
T ss_pred -----------CCCCCHHHHHHHHcc--cCcHHHHHHHHHHHHHHHHHHHHcCCCcCE
Confidence 111223444555554 445777899999999999999999987753
No 137
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=5.1e-14 Score=147.68 Aligned_cols=218 Identities=13% Similarity=0.120 Sum_probs=146.5
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
....|...++|+.+ +++.|.+. .+++++|+.++..++.. +.. +++++
T Consensus 50 r~~~p~~~~le~~l----A~l~g~~~-----------~v~~~sG~~ai~~~l~~-----l~~-------------Gd~Vl 96 (390)
T PRK08064 50 RSGNPTREALEDII----AELEGGTK-----------GFAFASGMAAISTAFLL-----LSK-------------GDHVL 96 (390)
T ss_pred CCCChhHHHHHHHH----HHHhCCCC-----------eEEECCHHHHHHHHHHH-----hCC-------------CCEEE
Confidence 34567777777755 77777652 47778887776444421 110 23444
Q ss_pred Eecccc-----hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 201 ASPACT-----ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 201 v~~s~~-----s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+....| .+.+.+...|++++.++. .|++++++++.+ ++.+|+++..++.+|.+.|+++|+++|
T Consensus 97 v~~~~y~~~~~~~~~~~~~~G~~v~~v~~----~d~~~l~~~l~~--------~tklV~l~~p~NptG~~~dl~~I~~la 164 (390)
T PRK08064 97 ISEDVYGGTYRMITEVLSRFGIEHTFVDM----TNLEEVAQNIKP--------NTKLFYVETPSNPLLKVTDIRGVVKLA 164 (390)
T ss_pred EccCccchHHHHHHHHHHHcCCEEEEECC----CCHHHHHHhcCC--------CceEEEEECCCCCCcEeccHHHHHHHH
Confidence 443332 222444557888888884 368888888866 567888899999999999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
+++|++++||+||+.+....+- .. .+|.++.++|||+++|.+ .|++++++.............|
T Consensus 165 ~~~g~~vvvD~a~~~~~~~~~~----~~---g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~------- 230 (390)
T PRK08064 165 KAIGCLTFVDNTFLTPLLQKPL----DL---GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSF------- 230 (390)
T ss_pred HHcCCEEEEECCCCcccccCch----hh---CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhc-------
Confidence 9999999999999854332221 11 359999999999998886 5888887654433221111111
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
+-...+...|..+ .|...+..++++...++..+.+.|+++|.+.
T Consensus 231 ------------g~~~~~~~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~ 274 (390)
T PRK08064 231 ------------GAVLGVQDCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQ 274 (390)
T ss_pred ------------CCCCCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 0112233455433 3555577889999999999999999998653
No 138
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.64 E-value=2.7e-13 Score=142.66 Aligned_cols=314 Identities=11% Similarity=0.067 Sum_probs=185.9
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++-+.+.+++++.+|.+-+ +....++|+|++++...++.+... + ++.+
T Consensus 60 ~Y~~~~G~~~lr~~~~~~l~~~~g~~~~------~~~~i~~t~G~~~~l~~~~~~~~~----------~-------gd~V 116 (389)
T PRK05957 60 KYQAVQGIPPLLEAITQKLQQDNGIELN------NEQAIVVTAGSNMAFMNAILAITD----------P-------GDEI 116 (389)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCeEEEeCChHHHHHHHHHHhcC----------C-------CCEE
Confidence 4544445567888899999999887421 012578899988887655544211 0 2234
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQV 274 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~i 274 (561)
++.... ......++..|.+++.+|. +++.+|+++|++.+.+ ++.+|+.+...+.||.+-| +++|+++
T Consensus 117 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--------~~klv~~~~p~NPtG~~~~~~~~~~i~~~ 188 (389)
T PRK05957 117 ILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITP--------KTRAIVTISPNNPTGVVYPEALLRAVNQI 188 (389)
T ss_pred EEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCc--------CceEEEEeCCCCCCCcCcCHHHHHHHHHH
Confidence 443333 3334445677889999998 6789999999999866 4667888888999999987 8999999
Q ss_pred HhhcCceEEechhcccccccCcccccccc--CccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMK--GVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~--gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
|++||+++++|.+|+....-......... ....-..+..++.|.++.|. =+|.++.. ...+.........+...
T Consensus 189 a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~~~~~~~~~~~~~~~-- 265 (389)
T PRK05957 189 CAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIP-IHLLEAIKKIQDTILIC-- 265 (389)
T ss_pred HHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecC-HHHHHHHHHHHhhcccC--
Confidence 99999999999999843321111101111 11111355677899886442 27777763 33332221111010000
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceee-ecccC
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF-RLKHW 428 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f-~~~~~ 428 (561)
...+.-..+...+ +...+++..++..+..+.+.+.|++++++..+.++..+..++ ++.+
T Consensus 266 -----------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~- 327 (389)
T PRK05957 266 -----------------PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNT- 327 (389)
T ss_pred -----------------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCC-
Confidence 0111122222333 233456666777778888888888876642233444444332 1110
Q ss_pred ccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHh
Q psy9807 429 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRING 508 (561)
Q Consensus 429 ~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~ 508 (561)
+.+ ..++.+.|.+
T Consensus 328 -----------------------------------------------------------------~~~--~~~~~~~l~~ 340 (389)
T PRK05957 328 -----------------------------------------------------------------DLN--DFELVKQLIR 340 (389)
T ss_pred -----------------------------------------------------------------CCC--hHHHHHHHHH
Confidence 111 3467888875
Q ss_pred -CCcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 509 -NGKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 509 -~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
.|.....+... .+..++|+++... +++++++.++.|.+..+.+.
T Consensus 341 ~~gv~v~pg~~f~~~~~~~iRis~~~~--~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 341 EYRVAVIPGTTFGMKNGCYLRIAYGAL--QKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred HCCEEEccchhhCCCCCCEEEEEEecC--CHHHHHHHHHHHHHHHHhhh
Confidence 56544433322 2245899997643 46678888888877665543
No 139
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.64 E-value=3.5e-13 Score=142.49 Aligned_cols=245 Identities=9% Similarity=0.043 Sum_probs=150.4
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++-+.+.+|+++.+|.+-+ .....++|+|++++...++.+..+ + ++.+
T Consensus 73 ~Y~~~~G~~~LR~aia~~l~~~~g~~~~------~~~~I~it~Ga~~al~~~~~~l~~----------~-------Gd~V 129 (405)
T PRK06207 73 AYTEYRGDADIRELLAARLAAFTGAPVD------AADELIITPGTQGALFLAVAATVA----------R-------GDKV 129 (405)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCCEEEeCCcHHHHHHHHHHhcC----------C-------CCEE
Confidence 3444444567889999999999996421 002578999998887665544211 0 2345
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeCC------CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPKE------FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LE 269 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~~------~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~ 269 (561)
++.... ......+...|.+++.+|.+ ++.+|++.|++++.+ .+.+|+.+.-++.||.+-+ ++
T Consensus 130 lv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~--------~~k~v~l~~P~NPTG~~~s~e~l~ 201 (405)
T PRK06207 130 AIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA--------GVRVFLFSNPNNPAGVVYSAEEIA 201 (405)
T ss_pred EEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh--------cCeEEEECCCCCCCCcCCCHHHHH
Confidence 555555 45556667788898888862 578999999998866 3556777888899999976 77
Q ss_pred HHHHHHhhcCceEEechhcccccccCcccccccc-Cc-cccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCc
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMK-GV-ELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLY 346 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~-gi-~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~y 346 (561)
+|+++|++||+|+++|.+|+-...-......... .. ..--.+..+++|.++.|. =+|.++. ++..+.. +.....+
T Consensus 202 ~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~-~~~l~~~-~~~~~~~ 279 (405)
T PRK06207 202 QIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFG-SPAIIDR-MEKLQAI 279 (405)
T ss_pred HHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEc-CHHHHHH-HHHHHhH
Confidence 8888999999999999999853221111111110 01 001267789999998662 2676654 4433332 2111111
Q ss_pred cccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 347 LKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
... ....+...+....+ +...+++.+++..+..+.+.+.|++.+++++..+
T Consensus 280 ~~~------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p 332 (405)
T PRK06207 280 VSL------------------RAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAP 332 (405)
T ss_pred hcc------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 000 00111111222222 2234567777777788888888888777775543
No 140
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.64 E-value=1.4e-13 Score=142.65 Aligned_cols=281 Identities=11% Similarity=0.074 Sum_probs=164.6
Q ss_pred ccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHH
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATL 169 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl 169 (561)
--|.+..+-+.+ .++-......+ -..-.+|..||...++|+.+ ++++|.+ ..++|++||+|..
T Consensus 38 ~v~iDLltDsgT-~aMs~~q~a~~-~~GDe~yag~~s~~~lE~~v----a~~~G~~-----------~av~v~sGT~Al~ 100 (450)
T TIGR02618 38 DVYIDLLTDSGT-NAMSDKQWAGL-MMGDEAYAGSRNFYHLERTV----RELYGFK-----------YVVPTHQGRGAEN 100 (450)
T ss_pred ceEEEcccCCCc-HHHHHHHHHHh-hhcchhhcCCCcHHHHHHHH----HHHHCCC-----------eEEEcCCHHHHHH
Confidence 346776655544 23222212222 22234689999999999977 6677876 4699999999943
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH-HHhccCCeEEeeC-----------CCCccChhhHHH
Q psy9807 170 VALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV-MLDWLGKMLDLPK-----------EFLACSGGKGGG 236 (561)
Q Consensus 170 ~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka-a~~~g~~v~~v~~-----------~~g~~d~~~Le~ 236 (561)
.+. .+ .+. .++.| .... .+-..+ ....|+.++-++. .+|.||+++|++
T Consensus 101 ll~-~l---~l~--------------pGDeV-psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~ 161 (450)
T TIGR02618 101 LLS-QI---AIK--------------PGDYV-PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQK 161 (450)
T ss_pred HHH-Hh---CCC--------------CcCEE-CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHH
Confidence 321 11 000 01223 2222 344444 3556665444422 358999999999
Q ss_pred HHhhhchhhcCCceEEEEEecCCCC-Cccc---cCHHHHHHHHhhcCceEEechhccc-ccccC----cccc-----ccc
Q psy9807 237 VIQRKSDREMCSDLLQVVATLGTTN-CCAF---DCLEEIGQVCRQKDVWLHVDAAYAG-SAFIC----PENR-----YLM 302 (561)
Q Consensus 237 ~i~~~~~~~~g~~p~~vv~t~gtt~-tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg-~~~~~----~~~~-----~~~ 302 (561)
+|.+ ... ...+ +|+++...+. .|.. +++++|.++|++||+++|.|||+.. .+.+. +.+. ...
T Consensus 162 aI~~--~~~-~~~~-lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~ 237 (450)
T TIGR02618 162 LIDE--VGA-DKIP-YICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEIL 237 (450)
T ss_pred Hhcc--ccC-cccC-ceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHH
Confidence 9976 321 1123 3333333333 3666 6789999999999999999999875 33332 1111 111
Q ss_pred cC-ccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh
Q psy9807 303 KG-VELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL 381 (561)
Q Consensus 303 ~g-i~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~ 381 (561)
.. ...+|++++++||-.++|. -|++.+++.+...++......| ++...+ +.-.+|...++.+ ++...
T Consensus 238 ~e~~~~aD~~~~S~~Kd~~~~~-GG~l~~~d~~l~~k~r~~~~~~------eG~~ty---Ggla~r~~~ala~--gL~e~ 305 (450)
T TIGR02618 238 KEMMSYADGCTMSGKKDCLVNI-GGFLCMNDDEMFQSAKELVVVF------EGMPSY---GGLAGRDMEAMAI--GIREA 305 (450)
T ss_pred HHHhccCcEEEEeeccCCCCCC-ceEEEeCCHHHHHHHHHHhhhc------CCcccc---CchhhhhHHHHHH--HHHHh
Confidence 11 3468999999999999998 4555668876665543322222 111111 1111232222221 12111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecc
Q psy9807 382 GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLK 426 (561)
Q Consensus 382 g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~ 426 (561)
- -+...++....+++|.+.|.+. |+.++.|+..+.|.++..
T Consensus 306 ~---~~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~ 346 (450)
T TIGR02618 306 V---DYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDAR 346 (450)
T ss_pred h---hHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhH
Confidence 1 1245667777899999999998 999988888888877554
No 141
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.64 E-value=7.1e-14 Score=147.14 Aligned_cols=219 Identities=14% Similarity=0.116 Sum_probs=146.7
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ +++.|.+ ..++++||+.|+..++.+.... ++.+++.
T Consensus 62 ~~p~~~~Le~~i----A~~~g~~-----------~~l~~~sG~~Ai~~al~~ll~~-----------------Gd~Vl~~ 109 (400)
T PRK06234 62 GNPTSTEVENKL----ALLEGGE-----------AAVVAASGMGAISSSLWSALKA-----------------GDHVVAS 109 (400)
T ss_pred CCccHHHHHHHH----HHHhCCC-----------cEEEEcCHHHHHHHHHHHHhCC-----------------CCEEEEe
Confidence 567788888866 5555543 3589999999987666542110 2344444
Q ss_pred ccc-----chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PAC-----TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~-----~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
... ..+...+...|++++.++. .|+++++++|.+ .+.+|+++..++.+|.+.|+++|+++|++
T Consensus 110 ~~~y~~~~~~~~~~~~~~G~~v~~vd~----~d~e~l~~~i~~--------~tklI~iesP~NPtG~v~dl~~I~~la~~ 177 (400)
T PRK06234 110 DTLYGCTFALLNHGLTRYGVEVTFVDT----SNLEEVRNALKA--------NTKVVYLETPANPTLKVTDIKAISNIAHE 177 (400)
T ss_pred cCccchHHHHHHHHHhhCCeEEEEECC----CCHHHHHHHhcc--------CCeEEEEECCCCCCCCcCCHHHHHHHHHh
Confidence 332 2233445667888888873 478999998866 46788888899999999999999999999
Q ss_pred c--CceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 278 K--DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 278 ~--~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
+ |++++||.+|+......+ . + ..+|.++.+++|+++++.. .|++..+ ++...........+.
T Consensus 178 ~~~~i~livDea~~~~~~~~~----l--~-~g~Divv~S~sK~l~g~g~~~gG~v~~~-~~~~~~l~~~~~~~~------ 243 (400)
T PRK06234 178 NNKECLVFVDNTFCTPYIQRP----L--Q-LGADVVVHSATKYLNGHGDVIAGFVVGK-EEFINQVKLFGIKDM------ 243 (400)
T ss_pred cCCCCEEEEECCCCchhcCCc----h--h-hCCcEEEeeccccccCCCCceeEEEEec-HHHHHHHHHHHHHHh------
Confidence 7 999999999985433221 1 1 1469999999999997764 4666654 333332111000100
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.+-.......|..++. .+.+..++++..++++++.+.|+++|.+.-
T Consensus 244 -----------~g~~l~p~~a~l~~~~--l~tl~~r~~~~~~na~~~a~~L~~~~~V~~ 289 (400)
T PRK06234 244 -----------TGSVIGPFEAFLIIRG--MKTLQIRMEKHCKNAMKVAKFLESHPAVEK 289 (400)
T ss_pred -----------cCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHcCCCeeE
Confidence 0112334445655544 444667888899999999999999987653
No 142
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.64 E-value=1.1e-13 Score=145.57 Aligned_cols=222 Identities=11% Similarity=0.118 Sum_probs=150.7
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
+....|...++|+.+ +++.|.+ ..+++++|+.|+..++.+... . ++++
T Consensus 65 ~r~~~p~~~~le~~l----A~l~g~~-----------~al~~~sG~~Ai~~~l~all~--------~---------Gd~V 112 (403)
T PRK07810 65 SRYGNPTVSMFEERL----RLIEGAE-----------ACFATASGMSAVFTALGALLG--------A---------GDRL 112 (403)
T ss_pred eCCCCchHHHHHHHH----HHHhCCC-----------cEEEECChHHHHHHHHHHHhC--------C---------CCEE
Confidence 444677777777755 7777764 469999999998776654311 0 2234
Q ss_pred EEeccc-----chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH
Q psy9807 200 IASPAC-----TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 200 vv~~s~-----~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
++.... ..+.+.+...|++++.++ ..|+++++++|.+ .+.+|++...++.+|.+.|+++|+++
T Consensus 113 l~~~~~~~~t~~~~~~~~~~~G~~v~~vd----~~d~~~l~~ai~~--------~tklV~~esp~Nptg~v~dl~~I~~l 180 (403)
T PRK07810 113 VAARSLFGSCFVVCNEILPRWGVETVFVD----GEDLSQWEEALSV--------PTQAVFFETPSNPMQSLVDIAAVSEL 180 (403)
T ss_pred EEccCCcchHHHHHHHHHHHcCcEEEEEC----CCCHHHHHHhcCc--------CceEEEEECCCCCCCeecCHHHHHHH
Confidence 433222 223344556788888887 4589999999876 46688888999999999999999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQ 352 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 352 (561)
|+++|++++||.||+......+ ... .+|.++.++||+++++.. .|+++.++. .+...+. .+...
T Consensus 181 a~~~g~~vivD~a~a~~~~~~~----~~~---gaDivv~S~tK~l~g~g~~~gG~v~~~~~-~~~~~l~---~~~~~--- 246 (403)
T PRK07810 181 AHAAGAKVVLDNVFATPLLQRG----LPL---GADVVVYSGTKHIDGQGRVLGGAILGDRE-YIDGPVQ---KLMRH--- 246 (403)
T ss_pred HHHcCCEEEEECCCCccccCCh----hhc---CCcEEEccCCceecCCcCceeEEEEeChH-HHHHHHH---HHHHH---
Confidence 9999999999999985433222 111 359999999999987543 466665443 3322111 11110
Q ss_pred CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 353 GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 353 ~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
.+........|..++ +.+.+..++++..+++.++.+.|+++|.++-+
T Consensus 247 ------------~g~~~s~~~a~l~l~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V 293 (403)
T PRK07810 247 ------------TGPALSAFNAWVLLK--GLETLALRVRHSNASALRIAEFLEGHPAVRWV 293 (403)
T ss_pred ------------hCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence 011234455565554 45568889999999999999999999887543
No 143
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.63 E-value=1.9e-13 Score=128.50 Aligned_cols=239 Identities=13% Similarity=0.069 Sum_probs=170.4
Q ss_pred HHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHHHHh
Q psy9807 137 WLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVVMLD 214 (561)
Q Consensus 137 ~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~kaa~~ 214 (561)
-+++++|.+. .=+|.|+-+|-+..+.+... .+..+|.-+. |+-.-|+..
T Consensus 69 dlaeFlg~D~-----------~R~t~GARe~KfavMhal~~------------------~gd~vV~D~~aHYttyvAAEr 119 (382)
T COG1103 69 DLAEFLGMDE-----------VRVTAGAREAKFAVMHALCK------------------EGDWVVVDSLAHYTTYVAAER 119 (382)
T ss_pred HHHHHhCCce-----------eeecccchhhHHHHHHHhcc------------------CCCEEEEcCcchHHHHHHHHh
Confidence 4789999863 46889988988776655321 1246666665 888889999
Q ss_pred ccCCeEEeeC---CCCccChhhHHHHHhhhchhhcC-CceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhccc
Q psy9807 215 WLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMC-SDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAG 290 (561)
Q Consensus 215 ~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g-~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg 290 (561)
.|.++..||. +++.++++...+.|++ -...+ ..|.+...|+.....|.+.|.+.++++|++||+++.+.+||..
T Consensus 120 agl~v~eVp~tg~Pey~i~~e~y~~viee--~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~ 197 (382)
T COG1103 120 AGLNVAEVPNTGYPEYKITPEGYAEVIEE--VKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTV 197 (382)
T ss_pred cCCeEEecCCCCCCceEecHHHHHHHHHH--HHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceee
Confidence 9999999998 7889999999999998 55554 6788999999999999999999999999999999999999987
Q ss_pred ccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc-CCc
Q psy9807 291 SAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG-RRF 369 (561)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s-r~~ 369 (561)
+.+.... .. -.||+|+.|+||.+.+..+||++.++.. .-...+..+..+..... . -.+.|+ |.+
T Consensus 198 Grmpvs~-----ke-~g~DFiVgSGHKsmAAs~PiGvl~~~eE-~ae~V~r~Sg~~~~~KE----v----ellGCT~rGa 262 (382)
T COG1103 198 GRMPVSG-----KE-IGADFIVGSGHKSMAASAPIGVLAMSEE-WAEIVLRRSGRAFPKKE----V----ELLGCTVRGA 262 (382)
T ss_pred ccccccc-----cc-cCCCEEEecCccchhccCCeeEEeehhH-HHHHHHhhcccccccce----e----eeecccccCc
Confidence 6554321 11 1579999999999999999999999764 22223333322211110 0 012333 334
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc--ccccceee
Q psy9807 370 RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE--VLMGLVCF 423 (561)
Q Consensus 370 ~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~--~~~~~v~f 423 (561)
..+.+.+++-.. .+.. ++++...+.+++|.+.++++.|+..+.. -...++.|
T Consensus 263 pivTlmASfP~V-~eRV-krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~F 316 (382)
T COG1103 263 PIVTLMASFPHV-VERV-KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKF 316 (382)
T ss_pred hHHHHHhcCHHH-HHHH-HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeee
Confidence 444444444332 2222 3456677889999999999987887753 34445555
No 144
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.63 E-value=4.5e-14 Score=154.32 Aligned_cols=229 Identities=13% Similarity=0.092 Sum_probs=157.0
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++.+..|+.||.+.+| ++++|.|.+|..++.++... ++.+++-... .|+..
T Consensus 198 ~eAe~~AA~~fgAd~ty----------fvvNGTS~~n~av~~a~~~~-----------------Gd~VLvdRN~HKSv~h 250 (714)
T PRK15400 198 KEAEEYIARVFNADRSY----------MVTNGTSTANKIVGMYSAPA-----------------GSTVLIDRNCHKSLTH 250 (714)
T ss_pred HHHHHHHHHHhCCCcEE----------EEeCchHHHHHHHHHHhcCC-----------------CCEEEeecccHHHHHH
Confidence 44555679999998764 67788888998877764321 2345555555 89999
Q ss_pred HHHhccCCeEEeeC--CC----CccC-----hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC
Q psy9807 211 VMLDWLGKMLDLPK--EF----LACS-----GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD 279 (561)
Q Consensus 211 aa~~~g~~v~~v~~--~~----g~~d-----~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~ 279 (561)
++.+.|+..+.+++ +. +.++ .+.++++|++ ... ..+|+.+++|. .|+.|.+-++++|+++|+.++
T Consensus 251 aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~--~p~-ak~p~~~vit~-pTYdG~~yd~~~I~~~~~~~~ 326 (714)
T PRK15400 251 LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKE--TPN-ATWPVHAVITN-STYDGLLYNTDFIKKTLDVKS 326 (714)
T ss_pred HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHh--Ccc-ccCccEEEEEC-CCCccEecCHHHHHHHhCCCC
Confidence 99999999888876 22 3455 8999999987 322 23676766666 488899999999999999887
Q ss_pred ceEEechhcccccccCccccccccCc-ccc---c--eeeecCCccccccccceeEEecCh---hhHHHhhc----cCCCc
Q psy9807 280 VWLHVDAAYAGSAFICPENRYLMKGV-ELA---D--SFNFNPHKWMLVTFDCSAMWLKDP---SWVVNAFN----VDPLY 346 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi-~~a---D--si~~~~HK~l~~P~g~g~l~~r~~---~~l~~~~~----~~~~y 346 (561)
+|||.|||+.+.|.|.++.. .++ ..+ | .++-|.||.|.+-..++++.++.. ..++.++. ++|.|
T Consensus 327 --ilvDEAwgah~~F~p~~~~~-sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY 403 (714)
T PRK15400 327 --IHFDSAWVPYTNFSPIYEGK-CGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHY 403 (714)
T ss_pred --EEEEccchhhhccCcccCCc-ChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHH
Confidence 79999999999888866421 112 234 5 899999999999999999888653 22222221 22222
Q ss_pred cccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEeccc
Q psy9807 347 LKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR------FEVIYEV 416 (561)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g------~~l~~~~ 416 (561)
+-. .++-+ +.+.+....-++++++..+.+..+++.+.++++ |+++.+.
T Consensus 404 ~l~--------------------ASLD~--a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~ 457 (714)
T PRK15400 404 GIV--------------------ASTET--AAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPD 457 (714)
T ss_pred HHH--------------------HHHHH--HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChh
Confidence 110 11111 112222223456778888899999999998877 8887543
No 145
>PRK09082 methionine aminotransferase; Validated
Probab=99.63 E-value=1.3e-13 Score=144.90 Aligned_cols=255 Identities=11% Similarity=0.037 Sum_probs=156.0
Q ss_pred HHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 108 DILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAH 187 (561)
Q Consensus 108 ~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~ 187 (561)
+.+...+......|.......++.+.+.+++.+++|.+... ....++|+|+|+|+..++.+...
T Consensus 50 ~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~------~~~i~~t~G~~~al~~~~~~~~~---------- 113 (386)
T PRK09082 50 EALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA------DSEITVTAGATEALFAAILALVR---------- 113 (386)
T ss_pred HHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC------CCcEEEeCCHHHHHHHHHHHHcC----------
Confidence 34444443323345444556789999999999998875320 12478899999998776654211
Q ss_pred CCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcc
Q psy9807 188 PDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCA 264 (561)
Q Consensus 188 ~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~ 264 (561)
+ ++.+++.... .++..+++..|.+++.+|. +++.+|++++++.+.+ ++.+|+++...+.||.
T Consensus 114 ~-------gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~p~NPtG~ 178 (386)
T PRK09082 114 P-------GDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISP--------RTRLIILNTPHNPSGT 178 (386)
T ss_pred C-------CCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCc--------cceEEEEeCCCCCCCc
Confidence 0 2244444444 5667777788999999998 4678999999998865 4566777777788997
Q ss_pred c---cCHHHHHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCccccccc-cceeEEecChhhHHH
Q psy9807 265 F---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVN 338 (561)
Q Consensus 265 i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~ 338 (561)
+ +++++|.++|++||+++++|.+|+....-....... ..+...-..+..+++|.++.|. -+|.++. +...+..
T Consensus 179 ~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~-~~~l~~~ 257 (386)
T PRK09082 179 VWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVA-PAALSAE 257 (386)
T ss_pred CCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhC-CHHHHHH
Confidence 6 789999999999999999999997432211111111 1122222467789999987664 2566555 4433322
Q ss_pred hhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 339 AFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
+.....+.. + ....+..+++...+ ....++++.+...+..+++.+.|++. ++++..
T Consensus 258 -~~~~~~~~~------------~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~ 315 (386)
T PRK09082 258 -FRKVHQYNT------------F------TVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLLP 315 (386)
T ss_pred -HHHHHhhhc------------C------CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC
Confidence 211111100 0 01111111122222 34455666666777888888888875 676543
No 146
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.63 E-value=9.5e-14 Score=145.33 Aligned_cols=219 Identities=14% Similarity=0.164 Sum_probs=144.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ ++++|.+ ..++++||+.|+..++.+.... ++++++.
T Consensus 52 ~~p~~~~le~~l----a~l~g~~-----------~~~~~~sG~~Ai~~al~al~~~-----------------Gd~Vl~~ 99 (380)
T TIGR01325 52 ANPTVAAFEERI----AALEGAE-----------RAVATATGMSAIQAALMTLLQA-----------------GDHVVAS 99 (380)
T ss_pred CCchHHHHHHHH----HHHhCCC-----------cEEEECCHHHHHHHHHHHHhCC-----------------CCEEEEe
Confidence 456666676644 7777774 3588999999998877553110 2345543
Q ss_pred ccc----ch-HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PAC----TE-LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~----~s-~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
.+. +. +.+.+...|.++..++. .|++++++++.+ .+.+|+++..++.+|.+.|+++|+++|++
T Consensus 100 ~~~~~~t~~~~~~~~~~~g~~v~~v~~----~d~~~l~~~i~~--------~tklV~le~p~np~g~~~dl~~I~~la~~ 167 (380)
T TIGR01325 100 RSLFGSTVGFISEILPRFGIEVSFVDP----TDLNAWEAAVKP--------NTKLVFVETPSNPLGELVDIAALAELAHA 167 (380)
T ss_pred cCCcchHHHHHHHHHHHhCCEEEEECC----CCHHHHHHhcCC--------CceEEEEECCCCCCCeeeCHHHHHHHHHH
Confidence 322 22 33345557888888874 268888888765 46788888888899999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEecChhhHHHhhccCCCccccCCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAP 356 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (561)
+|++++||++|+......| . -. .+|.++.++||+++++.. .|.+++.+...+..... +...
T Consensus 168 ~gi~livD~a~~~~~~~~p-l---~~---g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~----~~~~------- 229 (380)
T TIGR01325 168 IGALLVVDNVFATPVLQQP-L---KL---GADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAV----YLRH------- 229 (380)
T ss_pred cCCEEEEECCCcccccCCc-h---hh---CCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHH----HHHh-------
Confidence 9999999999975432221 1 11 369999999999998743 33344444433322111 1100
Q ss_pred CCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 357 DYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 357 ~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
.+........|..++ +.+.+..++++..+++.++.+.|+++|+++-+
T Consensus 230 --------~g~~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V 276 (380)
T TIGR01325 230 --------TGPAMSPFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQAV 276 (380)
T ss_pred --------hCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 011123334455554 45556778899999999999999999887643
No 147
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.63 E-value=1.8e-13 Score=143.28 Aligned_cols=238 Identities=13% Similarity=0.100 Sum_probs=148.2
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
.+|...++|+.+ ++++|.+ ..++++|||+|+..++.+.. + .+ ++++++.
T Consensus 31 ~g~~~~~le~~l----a~~~g~~-----------~~v~~~sgt~al~lal~al~---~------~~-------Gd~Viv~ 79 (379)
T PRK11658 31 TGPKNQALEQAF----CQLTGNQ-----------HAIAVSSATAGMHITLMALG---I------GP-------GDEVITP 79 (379)
T ss_pred CCHhHHHHHHHH----HHHhCCC-----------eEEEECCHHHHHHHHHHHcC---C------CC-------CCEEEEC
Confidence 477778888866 5556664 35889999999887776531 0 00 2344444
Q ss_pred ccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC
Q psy9807 203 PAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD 279 (561)
Q Consensus 203 ~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~ 279 (561)
... .+...++...|++++.+++ +.+.+|+++|++++.+ ++.+|+.+. .+|...|+++|+++|++||
T Consensus 80 ~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~--------~tkav~~~~---~~G~~~d~~~i~~~a~~~g 148 (379)
T PRK11658 80 SLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP--------RTKAIIPVH---YAGAPADLDAIRAIGERYG 148 (379)
T ss_pred CCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc--------CCeEEEEeC---CCCCcCCHHHHHHHHHHcC
Confidence 434 4555566778999999998 4457999999999866 455565433 4789999999999999999
Q ss_pred ceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhh--ccCCCccccCC---CCC
Q psy9807 280 VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAF--NVDPLYLKHDQ---QGS 354 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~--~~~~~yl~~~~---~~~ 354 (561)
+++++|+||+.+....... + +-...++++++.+|++.++ ..|+++..+++...+.. .....+..... .+.
T Consensus 149 i~vi~D~a~a~g~~~~~~~---~-g~~g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 223 (379)
T PRK11658 149 IPVIEDAAHAVGTYYKGRH---I-GARGTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGR 223 (379)
T ss_pred CeEEEECCCccCCeECCee---c-CCCCCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccC
Confidence 9999999998543322111 1 1112378899999998653 23444445554433221 11111110000 000
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR 409 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g 409 (561)
.+.+....+.. .++...+-+++...-.++++++.++..++++++.+.|++.|.
T Consensus 224 ~~~~~~~~~G~--n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~ 276 (379)
T PRK11658 224 APQAEVLTPGY--KYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPF 276 (379)
T ss_pred CCcceeecccc--ccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 01111111111 122234445555556778999999999999999999998864
No 148
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=6.3e-14 Score=148.16 Aligned_cols=235 Identities=11% Similarity=0.051 Sum_probs=144.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ +++.|.+ ..+++++|+.|+..++.+.... ++++++.
T Consensus 56 ~~pt~~~Le~~l----A~l~g~~-----------~~l~~ssG~~Ai~~al~al~~~-----------------Gd~Vl~~ 103 (425)
T PRK06084 56 MNPTNDVLEQRV----AALEGGV-----------GALAVASGMAAITYAIQTIAEA-----------------GDNIVSV 103 (425)
T ss_pred CCchHHHHHHHH----HHHhCCC-----------ceeEehhHHHHHHHHHHHHhCC-----------------CCEEEEe
Confidence 456667777755 6666653 4589999998887776553211 2244444
Q ss_pred cccch-HHHHH-H---hccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PACTE-LEVVM-L---DWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~~s-~~kaa-~---~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
...|. ....+ . ..|.++..++ ..|+++|+++|.+ .+.+|++...++.+|.+-|+++|+++|++
T Consensus 104 ~~~Y~~t~~~~~~~l~~~gi~v~~~d----~~d~e~le~ai~~--------~tklV~lesp~NPtG~v~dl~~I~~la~~ 171 (425)
T PRK06084 104 AKLYGGTYNLLAHTLPRIGIETRFAA----HDDIAALEALIDE--------RTKAVFCESIGNPAGNIIDIQALADAAHR 171 (425)
T ss_pred CCCcchHHHHHHHhcccceeEEEEEC----CCCHHHHHHHhcc--------CCcEEEEeCCCCCCCeecCHHHHHHHHHH
Confidence 33322 22222 1 1344555555 4589999999876 46678888889999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEecChh-hHHHh------h-ccCCCccc
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPS-WVVNA------F-NVDPLYLK 348 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~-~l~~~------~-~~~~~yl~ 348 (561)
||++++||++|+.+....| ... .+|.++.++|||++++.. .|.+++.+.. ..... + ...+.|..
T Consensus 172 ~~i~vVvD~a~a~~~~~~p----~~~---gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (425)
T PRK06084 172 HGVPLIVDNTVATPVLCRP----FEH---GADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHG 244 (425)
T ss_pred cCCEEEEECCCcccccCCh----hhc---CCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCccccc
Confidence 9999999999985433221 111 369999999999997743 3334443221 01000 0 11112211
Q ss_pred cCCCCCCCCCC----------cccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 349 HDQQGSAPDYR----------HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 349 ~~~~~~~~~~~----------~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
... ..+.+ ......+-+......|+.++ |.+.+..+++++.++|.++++.|+++|++.-+
T Consensus 245 ~~~---~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lr--gl~tl~~R~~~~~~na~~la~~L~~~p~v~~V 314 (425)
T PRK06084 245 VTY---TEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQ--GLETLALRMERHTENALKVARYLQQHPQVAWV 314 (425)
T ss_pred chh---hhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 000 00000 00011122234455565544 45568889999999999999999999987643
No 149
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.62 E-value=1.6e-13 Score=143.40 Aligned_cols=222 Identities=17% Similarity=0.119 Sum_probs=145.3
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
+....|...++|+ .++++.|.+ ..++++||++|+..++.+... + ++.+
T Consensus 46 ~R~~~p~~~~le~----~lA~l~g~~-----------~v~~~~gg~~Ai~~~l~all~----------~-------GD~V 93 (382)
T TIGR02080 46 SRSGNPTRDLLQQ----ALAELEGGA-----------GAVVTNTGMSAIHLVTTALLG----------P-------DDLL 93 (382)
T ss_pred cCCCCchHHHHHH----HHHHHhCCC-----------cEEEEcCHHHHHHHHHHHHcC----------C-------CCEE
Confidence 3345566666666 557777632 468999999988666654211 0 1233
Q ss_pred EEecccch-HHHH----HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH
Q psy9807 200 IASPACTE-LEVV----MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 200 vv~~s~~s-~~ka----a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
++....|. .... +...+.++..++ ..|++++++++++ ++.+|+++..++.+|.+-|+++|+++
T Consensus 94 l~~~p~y~~~~~~~~~~~~~~~~~v~~~d----~~d~~~l~~ai~~--------~tklV~l~~p~NPtG~~~dl~~I~~l 161 (382)
T TIGR02080 94 VAPHDCYGGTYRLLNALAKKGCFRVLFVD----QGDEQALRAALAQ--------KPKLVLIETPSNPLLRVVDIAKICHL 161 (382)
T ss_pred EEcCCCcHHHHHHHHHHHhhcCeEEEEEC----CCCHHHHHHhcCc--------CceEEEEECCCCCCCEecCHHHHHHH
Confidence 33222232 2222 122334555444 3478899998866 56788888899999999999999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQ 352 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 352 (561)
|+++|+++.||.+|+.+....| +.. .+|.++.++|||++++.+ .|++.+++........ ....++
T Consensus 162 a~~~g~~vvvD~a~~~~~~~~p----l~~---gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~-~~~~~~----- 228 (382)
T TIGR02080 162 AKAVGAVVVVDNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELA-WWANNL----- 228 (382)
T ss_pred HHHcCCEEEEECCCcccccCCc----hhh---CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHH-HHHHcc-----
Confidence 9999999999999975432221 111 359999999999998776 6766676654433221 111111
Q ss_pred CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 353 GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 353 ~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+.....+..|..++ |.+.+..+++++.+++..+.+.|++.|.++-+
T Consensus 229 -------------g~~~sp~~a~l~lr--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V 274 (382)
T TIGR02080 229 -------------GVTGGAFDSYLTLR--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKI 274 (382)
T ss_pred -------------CCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 11134455676655 45567778899999999999999999887643
No 150
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.62 E-value=1.1e-13 Score=145.75 Aligned_cols=221 Identities=12% Similarity=0.083 Sum_probs=146.1
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|...++|+. +++++|.+. .+++++|+.|+..++.+. +. + ++++++
T Consensus 62 ~~~p~~~~le~~----lA~l~g~~~-----------~i~~~sG~~Al~~~l~~l----l~------~-------Gd~Viv 109 (403)
T PRK07503 62 ISNPTLALLEQR----MASLEGGEA-----------AVALASGMGAITATLWTL----LR------P-------GDEVIV 109 (403)
T ss_pred CCCchHHHHHHH----HHHHhCCCc-----------EEEEcCHHHHHHHHHHHH----cC------C-------CCEEEE
Confidence 356667777764 578888753 488889998876665432 11 0 224444
Q ss_pred ecccc----h-HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 202 SPACT----E-LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 202 ~~s~~----s-~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
....| . ....+...|++++.++. .|++.|+++|.+ ++.+|++...++.+|.+.|+++|+++|+
T Consensus 110 ~~~~y~~t~~~~~~~~~~~G~~v~~vd~----~d~~~l~~~i~~--------~tklV~le~p~NPtG~~~di~~I~~la~ 177 (403)
T PRK07503 110 DQTLYGCTFAFLHHGLGEFGVTVRHVDL----TDPAALKAAISD--------KTRMVYFETPANPNMRLVDIAAVAEIAH 177 (403)
T ss_pred ccCccchHHHHHHHHHhhCCEEEEEeCC----CCHHHHHHhcCc--------cCcEEEEeCCCCCCCeeeCHHHHHHHHH
Confidence 33222 2 22344556778888873 378899988866 4667888888899999999999999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
+||++++||++|+......| . + -.+|.++.+++|+++++.+ .|+++ .+++...+........
T Consensus 178 ~~gi~lIvD~a~a~~~~~~~-l-----~-~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~~~~-------- 241 (403)
T PRK07503 178 GAGAKVVVDNTYCTPYLQRP-L-----E-LGADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEGLKD-------- 241 (403)
T ss_pred HcCCEEEEECCCcccccCCc-h-----h-hCCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhhHHh--------
Confidence 99999999999985432111 1 1 1459999999999997754 56665 5554433221100000
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
. .+-+...+..|..++ +.+.+..++++..+++..+.+.|+++|.++.+
T Consensus 242 ---~------~g~~~s~~~a~l~l~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V 289 (403)
T PRK07503 242 ---M------TGAVMSPFDAFLLMR--GLKTLALRMDRHCASAQAVAEWLARHPAVELV 289 (403)
T ss_pred ---C------cCCCCCHHHHHHHHc--CcchHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0 011234455565555 44557778888899999999999999877644
No 151
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.61 E-value=6.6e-13 Score=138.91 Aligned_cols=328 Identities=12% Similarity=0.092 Sum_probs=210.4
Q ss_pred HHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q psy9807 103 PAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQR 182 (561)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~ 182 (561)
|..+-+.+..+++.....|..+....+|-+.+.+++.+..|+.-. .....++|+|+++|++.++.+..+.
T Consensus 43 p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~------~~~eiivt~Ga~~al~~~~~a~~~p---- 112 (393)
T COG0436 43 PEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVD------PEEEIIVTAGAKEALFLAFLALLNP---- 112 (393)
T ss_pred CHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCeEEEeCCHHHHHHHHHHHhcCC----
Confidence 333444444444433214445666788999999999999885422 1124899999999998888764321
Q ss_pred HHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC---C-CCccChhhHHHHHhhhchhhcCCceEEEEEec
Q psy9807 183 VKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK---E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATL 257 (561)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~ 257 (561)
++++++.... .+......+.|++++.+|+ + ++.+|++.|++++.+ ++++|+++.
T Consensus 113 -------------GDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~--------ktk~i~ln~ 171 (393)
T COG0436 113 -------------GDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP--------KTKAIILNS 171 (393)
T ss_pred -------------CCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc--------cceEEEEeC
Confidence 2345555555 5555567889999999996 2 789999999999987 678999999
Q ss_pred CCCCCcccc---CHHHHHHHHhhcCceEEechhcccccccCccccccccCccc-cc-eee-ecCCcccccccc-ceeEEe
Q psy9807 258 GTTNCCAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVEL-AD-SFN-FNPHKWMLVTFD-CSAMWL 330 (561)
Q Consensus 258 gtt~tG~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~-aD-si~-~~~HK~l~~P~g-~g~l~~ 330 (561)
-++.||++- .+++|+++|++||+|++.|.+|.....-.......+ .+.. .| .|+ -+++|.++.+.- +|.+..
T Consensus 172 P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~-~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~ 250 (393)
T COG0436 172 PNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSIL-ELAGARDRTITINSFSKTYGMTGWRIGWVVG 250 (393)
T ss_pred CCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHh-hcCCCcceEEEEecccccccccccceeEeec
Confidence 999999995 688889999999999999999885332111111111 1111 11 344 489999987643 566665
Q ss_pred cChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHhc
Q psy9807 331 KDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG----VKYLQEYIRKQISLAKEFEQLVRS 406 (561)
Q Consensus 331 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g----~~g~~~~~~~~~~la~~l~~~l~~ 406 (561)
.+...+.. +..-..|+.. +. ..+.-.++...+. ....+.+.+...+..+.+.+.|.+
T Consensus 251 ~~~~l~~~-~~~~~~~~~~---------------~~---~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~ 311 (393)
T COG0436 251 PPEELIAA-LRKLKSYLTS---------------CA---PTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNE 311 (393)
T ss_pred ChHHHHHH-HHHHHHhccc---------------CC---CHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 53433332 2111111110 11 1122222333332 235566667778888999999999
Q ss_pred CCCeEEeccccccceee-ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhh
Q psy9807 407 DDRFEVIYEVLMGLVCF-RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLM 485 (561)
Q Consensus 407 ~~g~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~ 485 (561)
.+|+++..+|......| ++.
T Consensus 312 ~~g~~~~~~p~Ga~Y~~~~i~----------------------------------------------------------- 332 (393)
T COG0436 312 IGGLSVVKPPEGAFYLFPKIP----------------------------------------------------------- 332 (393)
T ss_pred cCCeeeccCCCeeEEEEeecC-----------------------------------------------------------
Confidence 98899988666655444 111
Q ss_pred cceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 486 GLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI----RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 486 ~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.. ....++..+|.++..+.+.|... .|.+++|+|++. +++++++.++.+.+..+.
T Consensus 333 --------~~-~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~---~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 333 --------EL-LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT---SEETLEEALRRLARFLAE 391 (393)
T ss_pred --------CC-CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec---CHHHHHHHHHHHHHHHHh
Confidence 00 11357888888876666654332 256799999775 337888888887766543
No 152
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.61 E-value=2.8e-13 Score=143.70 Aligned_cols=307 Identities=14% Similarity=0.067 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
.+++.++.+.+++++|.+.+ ..+|++|||+||..|+.++|.... .+++++....
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~---------~v~~~~sgsea~~~al~~~~~~~~---------------~~~ii~~~~~yh 133 (413)
T cd00610 78 NEPAVELAELLLALTPEGLD---------KVFFVNSGTEAVEAALKLARAYTG---------------RKKIISFEGAYH 133 (413)
T ss_pred CHHHHHHHHHHHHhCCCCCC---------EEEEcCcHHHHHHHHHHHHHHHcC---------------CCeEEEECCCcC
Confidence 45677777788888884332 579999999999999998875310 1244554433
Q ss_pred chHHHHHHhcc------------CCeEEeeCC-------CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc
Q psy9807 206 TELEVVMLDWL------------GKMLDLPKE-------FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD 266 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~~-------~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id 266 (561)
.+...+....+ .+++.+|.+ +...|++.|++.+++ . +..+.+|+++...+.+|.+.
T Consensus 134 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~---~~~~~~vi~~p~~~~~G~~~ 208 (413)
T cd00610 134 GRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEE--H---PEEVAAVIVEPIQGEGGVIV 208 (413)
T ss_pred CccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhc--C---CCCEEEEEEccccCCCCCcc
Confidence 22222333222 235556642 234488999998865 2 23567788888888889988
Q ss_pred C----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc
Q psy9807 267 C----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV 342 (561)
Q Consensus 267 p----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~ 342 (561)
| +++|.++|++||+++++|.+|++.............++ ..|.+++ .|+++..+.+|.++.+ ++.... +.
T Consensus 209 ~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~--sK~l~~g~~~g~~~~~-~~~~~~-~~- 282 (413)
T cd00610 209 PPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTL--GKGLGGGLPLGAVLGR-EEIMDA-FP- 282 (413)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEE--cccccCccccEEEEEc-HHHHHh-hc-
Confidence 7 99999999999999999999986321111101001122 3466654 5999987778988764 333322 20
Q ss_pred CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEec--ccccc
Q psy9807 343 DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR-FEVIY--EVLMG 419 (561)
Q Consensus 343 ~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g-~~l~~--~~~~~ 419 (561)
...+... . +. ..-.........+++.+.. .++.++..++.+++++.+++... ..+.. .....
T Consensus 283 ~~~~~~~---------~--t~-~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~ 347 (413)
T cd00610 283 AGPGLHG---------G--TF-GGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGL 347 (413)
T ss_pred cCCCCCC---------C--CC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCce
Confidence 0011000 0 00 0111222334445555544 35667777888888888876421 11111 12223
Q ss_pred ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHH
Q psy9807 420 LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEIN 499 (561)
Q Consensus 420 ~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~ 499 (561)
++.+.+.+... . + .+.....
T Consensus 348 ~~~~~~~~~~~--~---------------------------------------------------------~-~~~~~~~ 367 (413)
T cd00610 348 MIGIELVKDRA--T---------------------------------------------------------K-PPDKELA 367 (413)
T ss_pred EEEEEEecCCC--c---------------------------------------------------------C-CcchHHH
Confidence 33332211000 0 0 0011234
Q ss_pred HHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 500 EKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 500 ~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
..+.+.|.+.|.. +.+.. ..++|++++. ..+++||+++++.|+++
T Consensus 368 ~~~~~~l~~~gv~-v~~~~---~~~lR~~~~~-~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 368 AKIIKAALERGLL-LRPSG---GNVIRLLPPL-IITEEEIDEGLDALDEA 412 (413)
T ss_pred HHHHHHHHHCCeE-EeecC---CCEEEEECCC-cCCHHHHHHHHHHHHHh
Confidence 5788888888744 44322 3579998664 55788999999998764
No 153
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.61 E-value=2.8e-13 Score=141.12 Aligned_cols=313 Identities=12% Similarity=0.087 Sum_probs=196.9
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCC-eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc
Q psy9807 118 GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGG-GVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII 196 (561)
Q Consensus 118 ~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~-g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~ 196 (561)
...|..+....++++.+.+|+.+--|.+-+ .. .+++++|+.+++..+..... . .+ +
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~--------~~~~i~~~~G~~~~~~~~~~~~~--~------~~-------~ 93 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVD--------PEANILVTSGAQAALFLLLRLLK--I------NP-------G 93 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTT--------GGEGEEEESHHHHHHHHHHHHHH--S------ST-------T
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCcccc--------cceEEEEecccccchhhhhhccc--c------cc-------c
Confidence 345555666788999998888865555433 13 57777777777665544331 0 00 1
Q ss_pred cceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHH
Q psy9807 197 ANLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIG 272 (561)
Q Consensus 197 ~~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~ 272 (561)
+.+++.... ..+...++..|.+++.+|. +++++|+++|++.+++ ...++..+.+|+.+...+.||..-+.+++.
T Consensus 94 ~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~ 171 (363)
T PF00155_consen 94 DTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDE--LPSKGPRPKAVLICNPNNPTGSVLSLEELR 171 (363)
T ss_dssp SEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHT--SHTTTETEEEEEEESSBTTTTBB--HHHHH
T ss_pred ccceecCCccccccccccccCceeeecccccccccccccccccccccc--ccccccccceeeeccccccccccccccccc
Confidence 234444444 6677788889999999996 6889999999999988 555543467788888888999886655555
Q ss_pred HH---HhhcCceEEechhcccccccCccccccccCccc-c-ceeeecCCccccccc-cceeEEecChhhHHHhhccCCCc
Q psy9807 273 QV---CRQKDVWLHVDAAYAGSAFICPENRYLMKGVEL-A-DSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLY 346 (561)
Q Consensus 273 ~i---a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~-a-Dsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~y 346 (561)
++ |++||+++++|.+|+....-.+........++. . ..++.+++|.++.|. -.|.+.+ +.............+
T Consensus 172 ~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~~l~~~~~~~ 250 (363)
T PF00155_consen 172 ELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIERLRRFQRSG 250 (363)
T ss_dssp HHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHHHHHHHHHHT
T ss_pred chhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccc-hhhhhhhhhhccccc
Confidence 55 999999999999998654432221110111111 1 478999999998763 4677777 544333221111111
Q ss_pred cccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeee
Q psy9807 347 LKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG--VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 424 (561)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~ 424 (561)
. .-......+...+...+ .+.++++.++..+..+++.+.|++. ++.+..++ .+.++|.
T Consensus 251 ~------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~ 310 (363)
T PF00155_consen 251 L------------------SSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE-AGFFLWV 310 (363)
T ss_dssp T------------------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEE
T ss_pred c------------------ccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc-CccEEEE
Confidence 0 00011111112222222 2267788888999999999999888 88887665 5554441
Q ss_pred cccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHH
Q psy9807 425 LKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLK 504 (561)
Q Consensus 425 ~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~ 504 (561)
.- ......++.+
T Consensus 311 ~~--------------------------------------------------------------------~~~~~~~l~~ 322 (363)
T PF00155_consen 311 RL--------------------------------------------------------------------DPNDAEELAQ 322 (363)
T ss_dssp EE--------------------------------------------------------------------SHHHHHHHHH
T ss_pred Ec--------------------------------------------------------------------ccchHHHHHH
Confidence 10 0112457888
Q ss_pred HHHhC-CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHH
Q psy9807 505 RINGN-GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEI 546 (561)
Q Consensus 505 ~L~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 546 (561)
.|.++ |.....+.......++|+++ . ..++++++++++.|
T Consensus 323 ~L~~~~gi~v~pg~~~~~~~~iRi~~-a-~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 323 ELLEEYGILVRPGSYFGVPGYIRISL-A-SHSEEDLEEALERL 363 (363)
T ss_dssp HHHHHHTEEEEEGGGGTSTTEEEEEG-G-CSCHHHHHHHHHHH
T ss_pred HHHHhCCEEEEecCCCCCCCEEEEEe-c-cCCHHHHHHHHhhC
Confidence 88888 76655544333366899997 3 44778999998875
No 154
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.61 E-value=3.8e-13 Score=139.86 Aligned_cols=274 Identities=12% Similarity=0.071 Sum_probs=160.1
Q ss_pred cccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHH
Q psy9807 91 KFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLV 170 (561)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~ 170 (561)
-|.+..+-+.+ ..+.+...+.+-..-.+|..+|...++|+.+ ++++|.+ ..++|++||.|+..
T Consensus 46 v~IDLlSDS~T--~aMs~~q~a~~~vGDd~Yagd~s~~~LE~~v----Ae~lG~e-----------~aV~v~sGTaAl~l 108 (460)
T PRK13237 46 VYIDLLTDSGT--NAMSDRQWAGMMIGDEAYAGSRNFYHLEETV----QEYYGFK-----------HVVPTHQGRGAENL 108 (460)
T ss_pred EEEECcccCCc--hhccHHHHHHHhhcchhhcCCCcHHHHHHHH----HHHHCCC-----------eEEEeCCHHHHHHH
Confidence 46666654444 2222221222223344688999999999977 6667775 35999999999876
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHH-HHhccCCeEEee-----------CCCCccChhhHHH
Q psy9807 171 ALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVV-MLDWLGKMLDLP-----------KEFLACSGGKGGG 236 (561)
Q Consensus 171 al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~ka-a~~~g~~v~~v~-----------~~~g~~d~~~Le~ 236 (561)
+..+. + . .+.. | .+. .+-.++ ....|+...-+. ...|.||+++|++
T Consensus 109 l~~l~----v----------~----pGd~-V-p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~ 168 (460)
T PRK13237 109 LSRIA----I----------K----PGQY-V-PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQA 168 (460)
T ss_pred HHHhC----C----------C----CcCE-E-CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHH
Confidence 42210 0 0 0122 3 333 333334 344555444332 1578999999999
Q ss_pred HHhhhchhhcCCceEEEEEecCCCCC-cc---ccCHHHHHHHHhhcCceEEechhcccccc-cC----cccccc-----c
Q psy9807 237 VIQRKSDREMCSDLLQVVATLGTTNC-CA---FDCLEEIGQVCRQKDVWLHVDAAYAGSAF-IC----PENRYL-----M 302 (561)
Q Consensus 237 ~i~~~~~~~~g~~p~~vv~t~gtt~t-G~---idpl~eI~~ia~~~~~~lhVDaA~gg~~~-~~----~~~~~~-----~ 302 (561)
+|.+ ... ..+.+|+++...+.. |. .+++++|.++|++||+++|.|||+..... +. +.+... .
T Consensus 169 ~I~~--~~~--~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~ 244 (460)
T PRK13237 169 LIDE--VGA--ENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIV 244 (460)
T ss_pred Hhcc--ccC--CccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHh
Confidence 9976 321 122334444444444 43 35789999999999999999999875422 22 112211 1
Q ss_pred c-CccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh
Q psy9807 303 K-GVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL 381 (561)
Q Consensus 303 ~-gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~ 381 (561)
. -...+|.+++|+||.+.+|. -|++.++|.+...+.......|- +.+.+.. -.+|...++++ .+.-.
T Consensus 245 ~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL~~~~r~~~~~~e------G~~tygg---~~grd~~alAv--gl~E~ 312 (460)
T PRK13237 245 HEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEELFDEAKELVVVYE------GMPSYGG---MAGRDMEAMAI--GIEES 312 (460)
T ss_pred hhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHHHHHHHHhccccC------CCcCCCC---hhhhHHHHHHh--HHHhh
Confidence 1 12468999999999999876 57777888766655433222220 1111111 11344444332 11111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccce
Q psy9807 382 GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 421 (561)
Q Consensus 382 g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v 421 (561)
-. .+.+++..+.++||.+.|.+. |+.++.|...-.|
T Consensus 313 ~~---~~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v 348 (460)
T PRK13237 313 VQ---YEYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAV 348 (460)
T ss_pred ch---HHHHHHHHHHHHHHHHHHHHC-CCceecCCCceEE
Confidence 11 167778888999999999987 8988876544443
No 155
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.61 E-value=1.3e-12 Score=138.11 Aligned_cols=288 Identities=12% Similarity=0.053 Sum_probs=170.5
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELE 209 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~ 209 (561)
.++.+++++.+|.+.. ...+|++|||+||..|+.+++... ..+++..... .+..
T Consensus 88 ~~la~~l~~~~~~~~~--------~~v~~~~sgsea~~~al~~~~~~g----------------~~~ii~~~~~yhg~~~ 143 (398)
T PRK03244 88 IALAERLVELLGAPEG--------GRVFFCNSGAEANEAAFKLARLTG----------------RTKIVAAEGGFHGRTM 143 (398)
T ss_pred HHHHHHHHHhCCCCCC--------CEEEEeCchHHHHHHHHHHHHHHC----------------CCeEEEECCCcCCccH
Confidence 4666788888875421 257999999999999999887530 1134443222 2222
Q ss_pred HHHHhccC------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHHH
Q psy9807 210 VVMLDWLG------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIGQ 273 (561)
Q Consensus 210 kaa~~~g~------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~~ 273 (561)
.+..+.+. ++..+| ..|+++|++.+.+ .+.+|++....+.+|.+-| +++|.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~~~~--------~~~aviiep~~~~~G~~~~~~~~l~~l~~ 211 (398)
T PRK03244 144 GALALTGQPAKRAPFEPLPGGVEHVP----YGDVDALAAAVDD--------DTAAVFLEPIQGEAGVVPPPAGYLAAARE 211 (398)
T ss_pred HHHhccCCcccccCCCCCCCCceEeC----CCCHHHHHHhhcC--------CeEEEEEecccCCCCCcCCCHHHHHHHHH
Confidence 23223221 233333 3478899888744 4667777777889999887 999999
Q ss_pred HHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
+|++||+++++|.+|++.......+.....++ ..|.+++ .|+++..+..|.++.++. +...+... .+ .
T Consensus 212 l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~~~~~~--~~~~~~~~-~~------~ 279 (398)
T PRK03244 212 ITDRHGALLVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGACLAFGP--AADLLTPG-LH------G 279 (398)
T ss_pred HHHHcCCEEEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEEEEcHH--HHhhccCC-CC------c
Confidence 99999999999999986432221111111233 3576655 699997677888888654 22222210 00 0
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc--cccceeeecccCccc
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV--LMGLVCFRLKHWQIP 431 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~--~~~~v~f~~~~~~~~ 431 (561)
.+. ..-+........+++.+.. .++.++..++.++|.+.|++. ++.++... ...++.
T Consensus 280 -------~t~-~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~--------- 338 (398)
T PRK03244 280 -------STF-GGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLG--------- 338 (398)
T ss_pred -------CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEE---------
Confidence 000 0111122222333343433 245677778889999999875 22222111 111211
Q ss_pred cccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCc
Q psy9807 432 LGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGK 511 (561)
Q Consensus 432 ~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~ 511 (561)
+.+.. .....+.+++.+.|.
T Consensus 339 ----------------------------------------------------------i~~~~--~~~~~~~~~l~~~Gv 358 (398)
T PRK03244 339 ----------------------------------------------------------IVLTA--PVAKAVEAAAREAGF 358 (398)
T ss_pred ----------------------------------------------------------EEEec--cHHHHHHHHHHHCCe
Confidence 11111 124578888988885
Q ss_pred EEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 512 IHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 512 ~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+. .+. +..+||+++. ...+++||++++++|+++.+++
T Consensus 359 ~~-~~~---~~~~iR~~p~-~~~t~~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 359 LV-NAV---APDVIRLAPP-LIITDAQVDAFVAALPAILDAA 395 (398)
T ss_pred EE-eec---CCCEEEEECC-CcCCHHHHHHHHHHHHHHHHhc
Confidence 54 332 3358999965 4457889999999999887653
No 156
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=1.3e-13 Score=146.16 Aligned_cols=236 Identities=11% Similarity=0.044 Sum_probs=149.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ +++.|.+ .++++++|+.|+..++.+.... ++++++.
T Consensus 61 ~~p~~~~le~~l----A~l~g~~-----------~al~~~SG~~Ai~~al~all~p-----------------Gd~VIv~ 108 (427)
T PRK05994 61 TNPTNAVLEERV----AALEGGT-----------AALAVASGHAAQFLVFHTLLQP-----------------GDEFIAA 108 (427)
T ss_pred CCccHHHHHHHH----HHHhCCC-----------cEEEEcCHHHHHHHHHHHHhCC-----------------CCEEEEe
Confidence 456666677654 7777765 3689999999998777653210 1234433
Q ss_pred cccc-----hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PACT-----ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~~-----s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
...| .+...+...|.+++.++. .|+++++++|.+ .+.+|+++..++.+|.+.|+++|+++|++
T Consensus 109 ~~~y~~t~~~~~~~~~~~G~~v~~vd~----~d~~~l~~ai~~--------~tklV~vesp~NptG~v~dl~~I~~la~~ 176 (427)
T PRK05994 109 RKLYGGSINQFGHAFKSFGWQVRWADA----DDPASFERAITP--------RTKAIFIESIANPGGTVTDIAAIAEVAHR 176 (427)
T ss_pred cCcchhHHHHHHHHHHhcCcEEEEECC----CCHHHHHHhcCc--------CCeEEEEECCCCCCCeecCHHHHHHHHHH
Confidence 3222 233334556788888873 478899988866 56788888889999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEecChh-hHHHhhccCCCccccCC--CC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPS-WVVNAFNVDPLYLKHDQ--QG 353 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~-~l~~~~~~~~~yl~~~~--~~ 353 (561)
||++++||++|+.+....| +. ..+|.++.++||+++.+.+ .|.+++.... .+.. .....++.... .+
T Consensus 177 ~gi~livD~a~a~~~~~~p----l~---~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~--~k~~~~~~~~~~~~~ 247 (427)
T PRK05994 177 AGLPLIVDNTLASPYLIRP----IE---HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSK--SGKYPMLSEPRPEYH 247 (427)
T ss_pred cCCEEEEECCccccccCCc----cc---cCCcEEEEcCccccCCCCCcEEEEEEeCCcccccc--ccccccccCCcchhh
Confidence 9999999999985433221 11 2469999999999998764 4555553211 1000 00111221110 00
Q ss_pred CCCCCCc-------------ccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 354 SAPDYRH-------------WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 354 ~~~~~~~-------------~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+..-..+ .....+.....+..|..++ |.+.+..++++..++|.++.+.|+++|++.-+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~--~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v 318 (427)
T PRK05994 248 GLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILT--GIETLPLRMQRHSDNALAVAEWLKGHPKVSWV 318 (427)
T ss_pred hhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0000000 0001122334455565444 45558889999999999999999999987643
No 157
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.61 E-value=1.2e-12 Score=137.87 Aligned_cols=188 Identities=10% Similarity=0.067 Sum_probs=121.5
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|.......++.+.+.+|+.+..|.+-. .....++|+|+|+++..++.+.... ++.++
T Consensus 63 Y~~~~g~~~lr~~ia~~~~~~~~~~~~------~~~~i~it~G~~~al~~~~~~~~~~-----------------gd~vl 119 (391)
T PRK07309 63 YTGMAGLLELRQAAADFVKEKYNLDYA------PENEILVTIGATEALSASLTAILEP-----------------GDKVL 119 (391)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCC------CCCcEEEeCChHHHHHHHHHHhcCC-----------------CCEEE
Confidence 333334578999999999887776311 0125789999999987665542110 22444
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHHH
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQV 274 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~i 274 (561)
+.... ......++..|.+++.+|. . ++.+|++.|++++++ . ...+.+|+.+..++.||.+- ++++|+++
T Consensus 120 ~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~--~---~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~ 194 (391)
T PRK07309 120 LPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILE--Q---GDKLKAVILNYPANPTGVTYSREQIKALADV 194 (391)
T ss_pred EeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhc--c---CCCeEEEEEECCCCCCCcCcCHHHHHHHHHH
Confidence 44444 4566667788999999988 3 457999999999865 2 11456777777788899864 58999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHH
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVV 337 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~ 337 (561)
|++||+++++|.+|+....-.+.......-...--.+..+++|.++.|. -+|.++. +...+.
T Consensus 195 ~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~-~~~~~~ 257 (391)
T PRK07309 195 LKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFA-PAEFTA 257 (391)
T ss_pred HHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEe-CHHHHH
Confidence 9999999999999984332111111111101111367789999987663 2555655 444443
No 158
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.60 E-value=2e-13 Score=142.27 Aligned_cols=162 Identities=13% Similarity=0.009 Sum_probs=104.4
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEE-eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccc-hHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVI-QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACT-ELE 209 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~-t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~-s~~ 209 (561)
.++.+.+++.+|.+++ ..++ ++|+++++..++.+. .. + ++.+++....+ .+.
T Consensus 72 ~~lr~~ia~~~~~~~~---------~i~~~~~Ga~~~i~~~~~~~----~~------~-------gd~vlv~~p~y~~~~ 125 (361)
T PRK00950 72 PELREALSKYTGVPVE---------NIIVGGDGMDEVIDTLMRTF----ID------P-------GDEVIIPTPTFSYYE 125 (361)
T ss_pred HHHHHHHHHHhCCCHH---------HEEEeCCCHHHHHHHHHHHh----cC------C-------CCEEEEcCCChHHHH
Confidence 3445556667787654 4566 455555544333321 10 0 12344433334 444
Q ss_pred HHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhc
Q psy9807 210 VVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAY 288 (561)
Q Consensus 210 kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~ 288 (561)
..++..|.+++.+|. +++.+|+++|++.+.. .+.+|+.+...+.||.+.|++++.++|+++|+++++|++|
T Consensus 126 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y 197 (361)
T PRK00950 126 ISAKAHGAKPVYAKREEDFSLDVDSVLNAITE--------KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAY 197 (361)
T ss_pred HHHHHcCCEEEEeecCCCCCcCHHHHHHHhcc--------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECch
Confidence 556778999999998 6779999999998855 4556777788999999999999999999999999999999
Q ss_pred ccccccCccccccccCccccceeeecCCccccccc-cceeEEe
Q psy9807 289 AGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWL 330 (561)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~ 330 (561)
+... ...........+. -.+..+++|.++.|. -.|.+..
T Consensus 198 ~~~~--~~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~~~ 237 (361)
T PRK00950 198 VEFA--EYDYTPLALEYDN-LIIGRTFSKVFGLAGLRIGYGFV 237 (361)
T ss_pred hhhC--ccchHHHHHhcCC-EEEEEeehHhhcCchhhcchhcC
Confidence 7532 1112222211111 145568999887553 3555554
No 159
>PRK07682 hypothetical protein; Validated
Probab=99.60 E-value=6.6e-13 Score=139.24 Aligned_cols=310 Identities=13% Similarity=0.076 Sum_probs=188.3
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|...+...++.+.+.+|+.+.+|.+-+ .....++|+|+++|+..++.+..+ + ++.+
T Consensus 52 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~------~~~~i~~t~G~~~al~~~~~~l~~----------~-------gd~v 108 (378)
T PRK07682 52 SYTANAGLLELRQEIAKYLKKRFAVSYD------PNDEIIVTVGASQALDVAMRAIIN----------P-------GDEV 108 (378)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCC------CCCcEEEeCChHHHHHHHHHHhCC----------C-------CCEE
Confidence 3545566778999999999988887421 012578999999988666544211 0 1234
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIG 272 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~ 272 (561)
++.... ......+...|.+++.++. +++.+|+++|++++.+ .+.+|+.+...+.||.+- .+++|+
T Consensus 109 l~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~~~~p~NPtG~~~s~~~~~~l~ 180 (378)
T PRK07682 109 LIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA--------KTKAILLCSPNNPTGAVLNKSELEEIA 180 (378)
T ss_pred EEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc--------ccEEEEEECCCCCcCcCcCHHHHHHHH
Confidence 444444 4455566777888888887 2578999999998865 455666666788889885 488999
Q ss_pred HHHhhcCceEEechhcccccccCccccc--cccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCcccc
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRY--LMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~--~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
++|++||+++++|.+|+.... .+.... .+.+...-..+..+++|.++.| .-+|.++. ++..+....... .|...
T Consensus 181 ~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~i~~l~~~~-~~~~~ 257 (378)
T PRK07682 181 VIVEKHDLIVLSDEIYAELTY-DEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA-PVYFSEAMLKIH-QYSMM 257 (378)
T ss_pred HHHHHcCcEEEEehhhhhccc-CCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhc-CHHHHHHHHHHH-Hhhcc
Confidence 999999999999999985432 111111 0112212257788999999855 23777776 333333221110 11000
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeeccc
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKH 427 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~ 427 (561)
....+...++.+.+ |...+++..++..+..+++.+.|++. ++++.. ++.+...|.
T Consensus 258 ------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~-p~g~~~~~~--- 314 (378)
T PRK07682 258 ------------------CAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCHV-PGGAFYAFP--- 314 (378)
T ss_pred ------------------CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccCC-CCeeEEEEE---
Confidence 01122223333333 33446677777788888899999887 776543 333333320
Q ss_pred CccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHH
Q psy9807 428 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRIN 507 (561)
Q Consensus 428 ~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~ 507 (561)
.++..+.+ ..++.+.+.
T Consensus 315 -------------------------------------------------------------~~~~~~~~--~~~~~~~ll 331 (378)
T PRK07682 315 -------------------------------------------------------------SISSTGLS--SEEFAEQLL 331 (378)
T ss_pred -------------------------------------------------------------eccCCCCC--HHHHHHHHH
Confidence 01000111 346777766
Q ss_pred -hCCcEEEEeee--ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 508 -GNGKIHLVPSK--IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 508 -~~g~~~~~~~~--~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+.|..+..+.. ..+..++|+++++ +++++++.++.|+++.++
T Consensus 332 ~~~gv~v~pg~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 332 LEEKVAVVPGSVFGESGEGFIRCSYAT---SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred HhCCEEEcCchhhCcCCCCeEEEEeCC---CHHHHHHHHHHHHHHHhh
Confidence 45654443322 2335799999774 468899999988876643
No 160
>PRK07324 transaminase; Validated
Probab=99.60 E-value=9.5e-13 Score=137.69 Aligned_cols=237 Identities=11% Similarity=-0.034 Sum_probs=140.9
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++.+.+.+|+. +.+++ ..++|+|+++++..++.+..+. ++.+
T Consensus 57 ~Y~~~~G~~~lr~~ia~~~~---~~~~~---------~vi~t~G~~~al~~~~~~l~~~-----------------gd~V 107 (373)
T PRK07324 57 TYGWIEGSPEFKEAVASLYQ---NVKPE---------NILQTNGATGANFLVLYALVEP-----------------GDHV 107 (373)
T ss_pred cCCCCCCCHHHHHHHHHHhc---CCChh---------hEEEcCChHHHHHHHHHHhCCC-----------------CCEE
Confidence 33333334556666655553 24433 5789999999988776653210 2344
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIG 272 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~ 272 (561)
++.... .+....++..|.+++.+|. . ++.+|+++|++.+.+ ++.+|+.+..++.||.+-+ +++|+
T Consensus 108 l~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~--------~~kli~i~~p~NPtG~~~~~~~l~~i~ 179 (373)
T PRK07324 108 ISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRP--------NTKLICINNANNPTGALMDRAYLEEIV 179 (373)
T ss_pred EEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCC--------CCcEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 444333 4556667788999999998 3 346899999887755 4667888888999999887 99999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
++|++||+++++|.+|..... .+.........++ .....+++|.++.|. -+|.+.. ++..+.. +.....|...
T Consensus 180 ~~a~~~~~~ii~De~y~~l~~-~~~~~s~~~~~~~-~I~~~s~SK~~~~~G~RiG~i~~-~~~li~~-~~~~~~~~~~-- 253 (373)
T PRK07324 180 EIARSVDAYVLSDEVYRPLDE-DGSTPSIADLYEK-GISTNSMSKTYSLPGIRVGWIAA-NEEVIDI-LRKYRDYTMI-- 253 (373)
T ss_pred HHHHHCCCEEEEEcccccccc-CCCCCChhhccCC-EEEEecchhhcCCccceeEEEec-CHHHHHH-HHHHhCcEEe--
Confidence 999999999999999875321 1111111111111 355679999988553 3577766 5444432 2211111100
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG--VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
....+.-+++...+. ..-++++.+...+..+.+.+.|++.+++....|
T Consensus 254 ----------------~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p 303 (373)
T PRK07324 254 ----------------CAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKP 303 (373)
T ss_pred ----------------cCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECC
Confidence 011122222222221 223444445555666777788887777766544
No 161
>PRK06460 hypothetical protein; Provisional
Probab=99.60 E-value=4.3e-13 Score=140.03 Aligned_cols=222 Identities=14% Similarity=0.089 Sum_probs=141.0
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 119 FTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 119 ~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
++....|...++|+.+ ++++|.+. .+++++|++|+..++.+... + +++
T Consensus 39 y~r~~~p~~~~L~~~l----A~l~g~~~-----------~v~~~sG~~ai~~~l~al~~----------~-------Gd~ 86 (376)
T PRK06460 39 YSREANPTVLELTKKI----VELENAEM-----------GVAFSSGMGAISTTALALLK----------P-------GNS 86 (376)
T ss_pred eeCCCCccHHHHHHHH----HHHhCCCc-----------EEEeCCHHHHHHHHHHHHhC----------C-------CCE
Confidence 3445667777777755 77777753 46678888877665544211 0 234
Q ss_pred eEEeccc----c-hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHH
Q psy9807 199 LIASPAC----T-ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQ 273 (561)
Q Consensus 199 ~vv~~s~----~-s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ 273 (561)
+++..+. + .+...+...|.+++.++.+ +.+.+++.+++ ++.+|+++..++.+|.+-|+++|++
T Consensus 87 Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~----~~~~l~~~~~~--------~tklV~l~sp~NPtG~v~d~~~I~~ 154 (376)
T PRK06460 87 VLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG----SDNIIEKAKSK--------RYDVVFVENITNPLLRVVDITELSK 154 (376)
T ss_pred EEEecCCcCcHHHHHHHHHHhhCcEEEEECCC----CHHHHHHhcCC--------CceEEEEECCCCCCCcccCHHHHHH
Confidence 5554332 3 3345567778888887742 22334443333 5678888999999999999999999
Q ss_pred HHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
+|++||++++||.+|+...... .... .+|.++.++||+++++.+ .|++ +.++............|
T Consensus 155 la~~~g~~vivDea~~~~~~~~----~l~~---~~divv~S~sK~l~G~~~~~~G~~-~~~~~l~~~l~~~~~~~----- 221 (376)
T PRK06460 155 VCKENGSILIVDATFSTPINQK----PLEL---GADIVVHSASKFLAGHNDVIAGLA-AGYGKLLNVIDQMRRTL----- 221 (376)
T ss_pred HHHHcCCEEEEECCcCccccCC----hhhc---CCCEEEeecceeccCCCCceEEEE-ecCHHHHHHHHHHHHhc-----
Confidence 9999999999999997532111 1111 359999999999975542 4544 44544333221111111
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+ -...+...|.+++ |.+.++.++++..++++++.+.|+++|.++-+
T Consensus 222 ----------g----~~~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v 267 (376)
T PRK06460 222 ----------G----TSLDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKV 267 (376)
T ss_pred ----------C----CCCCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 0 0012234455444 56778889999999999999999999876533
No 162
>PLN00175 aminotransferase family protein; Provisional
Probab=99.60 E-value=1.3e-12 Score=138.44 Aligned_cols=258 Identities=14% Similarity=0.096 Sum_probs=159.0
Q ss_pred HHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 105 IVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
.+.+.+...+......|.......++.+.+.+|+.+..|.+-+ .....++|+|+++++..++.+..+
T Consensus 71 ~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~------~~~~I~vt~G~~~al~~~~~~l~~------- 137 (413)
T PLN00175 71 FVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVD------PEKEVTVTSGCTEAIAATILGLIN------- 137 (413)
T ss_pred HHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCCEEEeCCHHHHHHHHHHHhCC-------
Confidence 3445555555433334555556678999999999988886421 001478899999987665543211
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
+ ++.+++.... ......++..|.+++.+|. +++.+|++.|++.+.. .+.+|+.+...+.
T Consensus 138 ---~-------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~--------~~k~i~i~~p~NP 199 (413)
T PLN00175 138 ---P-------GDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTS--------KTRAILINTPHNP 199 (413)
T ss_pred ---C-------CCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCc--------CceEEEecCCCCC
Confidence 0 2344444444 4455667788999999998 4578999999998865 4567777788888
Q ss_pred Ccccc---CHHHHHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCccccccc-cceeEEecChhh
Q psy9807 262 CCAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSW 335 (561)
Q Consensus 262 tG~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~ 335 (561)
||.+- .+++|+++|++||+|+++|.+|..... .+..... +.+...-..+..++.|.++.|. -+|.+.. ++..
T Consensus 200 tG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~-~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~-~~~l 277 (413)
T PLN00175 200 TGKMFTREELELIASLCKENDVLAFTDEVYDKLAF-EGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHL 277 (413)
T ss_pred CCcCCCHHHHHHHHHHHHHcCcEEEEecccCcccc-CCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEe-CHHH
Confidence 99885 578899999999999999999975432 2111111 1121112466789999998664 3565555 4433
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+..... ...+... ....+.-+++.+.+ +...+++..++..+..+.+.+.|++. ++++.
T Consensus 278 ~~~l~~-~~~~~~~------------------~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 337 (413)
T PLN00175 278 TWGVRQ-AHSFLTF------------------ATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVY 337 (413)
T ss_pred HHHHHH-HHhhccC------------------CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec
Confidence 332211 1111000 01112222233333 33456777777888888899999887 77765
Q ss_pred cc
Q psy9807 414 YE 415 (561)
Q Consensus 414 ~~ 415 (561)
.+
T Consensus 338 ~p 339 (413)
T PLN00175 338 PS 339 (413)
T ss_pred CC
Confidence 43
No 163
>PRK08912 hypothetical protein; Provisional
Probab=99.60 E-value=1.7e-12 Score=136.54 Aligned_cols=244 Identities=11% Similarity=0.001 Sum_probs=149.4
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++.+.+.+|+.+.+|.+-+. ....++|+|+++++..++.+... + ++.+
T Consensus 58 ~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~------~~~i~~t~G~~~al~~~~~~~~~----------~-------gd~V 114 (387)
T PRK08912 58 QYPPMMGLPELRQAVAAHYARFQGLDLDP------ETEVMVTSGATEALAAALLALVE----------P-------GDEV 114 (387)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCCC------cccEEEeCCcHHHHHHHHHHhcC----------C-------CCEE
Confidence 34433345688899999998888864220 01578999999987555443210 0 2344
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQ 273 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ 273 (561)
++.... .....++...|.+++.+|. +++.+|++.|++.+.. .+.+|+.+...+.||.+-+ +++|++
T Consensus 115 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~s~~~~~~i~~ 186 (387)
T PRK08912 115 VLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSP--------RTKAVLLNNPLNPAGKVFPREELALLAE 186 (387)
T ss_pred EEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCc--------cceEEEEeCCCCCcCcccCHHHHHHHHH
Confidence 554444 5566667888999999998 3678999999998865 4567777788899998876 777999
Q ss_pred HHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHD 350 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~ 350 (561)
+|++||+++++|.+|+....-....... ..+...-+.+..+++|.++.|. -+|.++. +...+.........+..
T Consensus 187 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~~~~~l~~~~~~~~~-- 263 (387)
T PRK08912 187 FCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCA-APPLLRVLAKAHQFLTF-- 263 (387)
T ss_pred HHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEec-CHHHHHHHHHHHhhccc--
Confidence 9999999999999987432211111111 1122223688899999887542 3777776 44333222111111000
Q ss_pred CCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 351 QQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
..+. ....+....+ ..+.+++..++..+..+++.+.|++. ++++..+
T Consensus 264 -------------~~~~----~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 312 (387)
T PRK08912 264 -------------TTPP----NLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVLPS 312 (387)
T ss_pred -------------cCCh----HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC
Confidence 0000 0011111112 12334566677778888888999887 6766543
No 164
>PRK08363 alanine aminotransferase; Validated
Probab=99.59 E-value=1.1e-12 Score=138.41 Aligned_cols=253 Identities=10% Similarity=0.001 Sum_probs=151.2
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|...+...++.+.+.+|+.+..|.+-+ ....++|+|+|+++..++.+..+ + ++.+
T Consensus 65 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~it~G~~~al~~~~~~~~~----------~-------gd~V 120 (398)
T PRK08363 65 YYGPSEGLPELREAIVKREKRKNGVDIT-------PDDVRVTAAVTEALQLIFGALLD----------P-------GDEI 120 (398)
T ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCC-------hhhEEEeCCHHHHHHHHHHHhCC----------C-------CCEE
Confidence 3444566788999999999887664321 12678999999988766554311 0 2234
Q ss_pred EEeccc-chHHHHHHhccCCeEEe-eC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDL-PK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIG 272 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v-~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~ 272 (561)
++.... ......+...|.+++.+ +. +++.+|++.|++.+.+ .+.+|+.+..++.||.+-+ +++|+
T Consensus 121 l~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~~~~~~~~l~ 192 (398)
T PRK08363 121 LIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE--------KTKAIAVINPNNPTGALYEKKTLKEIL 192 (398)
T ss_pred EEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCc--------ceEEEEEECCCCCCCcCcCHHHHHHHH
Confidence 444444 45556667777777777 44 3457899999988865 4567777788888998876 89999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCccccc--eeeecCCcccccc-ccceeEEec-ChhhHHHhhccCCCccc
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELAD--SFNFNPHKWMLVT-FDCSAMWLK-DPSWVVNAFNVDPLYLK 348 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aD--si~~~~HK~l~~P-~g~g~l~~r-~~~~l~~~~~~~~~yl~ 348 (561)
++|++||+++++|++|+... +...... ...+...+ .+..+++|+++.| ..+|.+++. +...+.........+..
T Consensus 193 ~~a~~~~~~li~Deay~~~~-~~~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~ 270 (398)
T PRK08363 193 DIAGEHDLPVISDEIYDLMT-YEGKHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLAR 270 (398)
T ss_pred HHHHHcCeEEEEhhhhhhhc-cCCcccC-HHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhc
Confidence 99999999999999998532 2211111 11111112 4467999996544 568888873 33222211110000000
Q ss_pred cCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceee
Q psy9807 349 HDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 423 (561)
Q Consensus 349 ~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f 423 (561)
. .+ . ...+...++...+ ..+.+++..++..+..+++.+.|+++|++++. ++..+.+.|
T Consensus 271 ~----------~~--~----~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~g~~~~~ 330 (398)
T PRK08363 271 I----------RL--C----PNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTT-KPQGAFYIF 330 (398)
T ss_pred c----------cc--c----CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec-CCCeEEEEE
Confidence 0 00 0 0111111122222 24556666777778888888999888787754 344555443
No 165
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.59 E-value=1.7e-14 Score=132.68 Aligned_cols=163 Identities=20% Similarity=0.085 Sum_probs=117.8
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH-
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE- 209 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~- 209 (561)
.++.++++++++.+. ...++++|||+|+..++.+++.. .+++++.... .+..
T Consensus 3 ~~~~~~l~~~~~~~~---------~~~~~~~~~t~a~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~~ 56 (170)
T cd01494 3 EELEEKLARLLQPGN---------DKAVFVPSGTGANEAALLALLGP-----------------GDEVIVDANGHGSRYW 56 (170)
T ss_pred HHHHHHHHHHcCCCC---------CcEEEeCCcHHHHHHHHHHhCCC-----------------CCEEEEeecccceehh
Confidence 356678899986332 26799999999998888775421 1244554444 4555
Q ss_pred HHHHhccCCeEEeeC-CCCccChh--hHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech
Q psy9807 210 VVMLDWLGKMLDLPK-EFLACSGG--KGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 210 kaa~~~g~~v~~v~~-~~g~~d~~--~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa 286 (561)
..+...|.+++.++. .++..+.+ .+++.. ...+|.+++.+..++.+|...|+++|+++|+++|+++|+|+
T Consensus 57 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~ 129 (170)
T cd01494 57 VAAELAGAKPVPVPVDDAGYGGLDVAILEELK-------AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDA 129 (170)
T ss_pred hHHHhcCCEEEEeccCCCCccchhhhhhhhcc-------ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEec
Confidence 667778899999988 44333332 333322 12378899999999999999999999999999999999999
Q ss_pred hcccccccCccccccccCccccceeeecCCccccccccceeEEec
Q psy9807 287 AYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLK 331 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r 331 (561)
||+++....+.... ....+|+++.++|||++. .++|++++|
T Consensus 130 a~~~~~~~~~~~~~---~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 130 ASAGGASPAPGVLI---PEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cccccccccccccc---ccccCCEEEEEcccccCC-CceEEEEeC
Confidence 99976654422111 123469999999999998 789999875
No 166
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.59 E-value=7.2e-13 Score=139.49 Aligned_cols=252 Identities=15% Similarity=0.086 Sum_probs=148.4
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 119 FTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 119 ~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
..|..++...++|+.+.++ +|.+ ..++|+|||+|+..++.+... .++
T Consensus 47 ~~Y~~~~g~~~Leeaia~~----~g~~-----------~vv~t~~Gt~Al~la~~al~~------------------pGD 93 (431)
T cd00617 47 EAYAGSKSFYDLEDAVQDL----FGFK-----------HIIPTHQGRGAENILFSILLK------------------PGR 93 (431)
T ss_pred CccCCCCCHHHHHHHHHHH----HCCC-----------eEEEcCCHHHHHHHHHHHhCC------------------CCC
Confidence 4588888888999987555 4554 469999999999888765311 012
Q ss_pred eEEecccch-HHHHHHhccCCeEEeeC-C----------CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC-ccc
Q psy9807 199 LIASPACTE-LEVVMLDWLGKMLDLPK-E----------FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC-CAF 265 (561)
Q Consensus 199 ~vv~~s~~s-~~kaa~~~g~~v~~v~~-~----------~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t-G~i 265 (561)
.|+....+. ....+...|+.++.+++ . .+.+|+++|++.|.+ .. ..++.+|+++..++.+ |.+
T Consensus 94 ~V~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~--~~--~~~~~~I~v~~p~N~~gG~~ 169 (431)
T cd00617 94 TVPSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDE--VG--AENIPYIVLTITNNTAGGQP 169 (431)
T ss_pred EEccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCc--cc--CCCccEEEEECCcCCCCCcc
Confidence 333222233 33345678888888887 2 245999999999976 21 0135566666555555 666
Q ss_pred c---CHHHHHHHHhhcCceEEechhcccc-cccC----cccccc-cc-----CccccceeeecCCccccccccceeEEec
Q psy9807 266 D---CLEEIGQVCRQKDVWLHVDAAYAGS-AFIC----PENRYL-MK-----GVELADSFNFNPHKWMLVTFDCSAMWLK 331 (561)
Q Consensus 266 d---pl~eI~~ia~~~~~~lhVDaA~gg~-~~~~----~~~~~~-~~-----gi~~aDsi~~~~HK~l~~P~g~g~l~~r 331 (561)
- ++++|+++|++||+|+|.|+|+... +.+. +.+... +. -...+|++++++||.+++|. -|++..+
T Consensus 170 ~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~ 248 (431)
T cd00617 170 VSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALR 248 (431)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeC
Confidence 4 5678899999999999999996542 1221 111110 10 11357999999999988876 3456666
Q ss_pred ChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHhcCCC
Q psy9807 332 DPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYL--QEYIRKQISLAKEFEQLVRSDDR 409 (561)
Q Consensus 332 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~--~~~~~~~~~la~~l~~~l~~~~g 409 (561)
+.+...+.......+ . +...+. +-..+-+ .++ ..|.+.. .+.+++..+.++++.+.|++. |
T Consensus 249 d~~l~~~~~~~~~~~--~----~~~~~g------G~~~r~~---~A~-A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~-G 311 (431)
T cd00617 249 DDELYEEARQRVVLY--E----GFVTYG------GMAGRDM---EAL-AQGLREAVEEDYLRHRVEQVRYLGDRLDEA-G 311 (431)
T ss_pred cHHHHHHHHHhcccc--C----Cccccc------cccHHHH---HHH-HHHHHhcccHHHHHHHHHHHHHHHHHHHHC-C
Confidence 654444322111000 0 000110 1011111 111 2222111 244566666778999999988 8
Q ss_pred eEEeccccccceeeec
Q psy9807 410 FEVIYEVLMGLVCFRL 425 (561)
Q Consensus 410 ~~l~~~~~~~~v~f~~ 425 (561)
+.+..|.....|..+.
T Consensus 312 ~~v~~P~Ggh~v~~d~ 327 (431)
T cd00617 312 VPIVEPAGGHAVFIDA 327 (431)
T ss_pred CCccCCCcceEEEEEh
Confidence 8887765554544433
No 167
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.59 E-value=3.6e-13 Score=137.77 Aligned_cols=337 Identities=11% Similarity=-0.055 Sum_probs=205.9
Q ss_pred ccccCCCCCChH-HHHHHHHHhhccccc---c---ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCCh
Q psy9807 92 FHAYFPTANSYP-AIVADILSDSIACIG---F---TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTA 164 (561)
Q Consensus 92 ~~~~~~~~~~~~-~~~~~~l~~~~n~~~---~---~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~gg 164 (561)
-++|.++|...| .++..+-.+.+|... + ....+|.+.++-+++.+-|+++|+.|+++ .-.++++||
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y-------~Vlfl~Ggg 77 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY-------GVVFLQGGS 77 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC-------eEEEEeccH
Confidence 456777666544 677777777777443 1 23367889999999999999999998752 133566778
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE--Eeccc--chHHHHHHhccCCeEEeeC-C----CCccChhhHH
Q psy9807 165 SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI--ASPAC--TELEVVMLDWLGKMLDLPK-E----FLACSGGKGG 235 (561)
Q Consensus 165 T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v--v~~s~--~s~~kaa~~~g~~v~~v~~-~----~g~~d~~~Le 235 (561)
|.+.-.+++..... +++.+ +.+.. ..+.+-+...| ++..+.. . ....+++.+
T Consensus 78 T~~~ea~~~Nll~~-----------------g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~- 138 (364)
T PRK12462 78 SLQFSMIPMNFSRP-----------------GAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL- 138 (364)
T ss_pred HHHHHHHHHHcCCC-----------------CCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh-
Confidence 87764444332110 12233 22222 33444443334 4444432 1 123344443
Q ss_pred HHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecC
Q psy9807 236 GVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNP 315 (561)
Q Consensus 236 ~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~ 315 (561)
.+.+ ....|..|+..|.+|...| ++.+.++..++||+.-+.+....+ ++..|.+..+.
T Consensus 139 -~~~~--------d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid--------~~~~dvi~ags 196 (364)
T PRK12462 139 -DWDA--------RAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFD--------VEAYGMVYAHA 196 (364)
T ss_pred -ccCC--------CCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCC--------hHHccEEEeec
Confidence 1111 2457999999999999986 444457999999986443222111 23349999999
Q ss_pred CccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHH--HHHHHHHH
Q psy9807 316 HKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVK--YLQEYIRK 392 (561)
Q Consensus 316 HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~--g~~~~~~~ 392 (561)
+|.|+ |.|.++++++++.. .+.-...+.|+..... . ...+...+-+ +....+-.+++.+-.+ |++.+.++
T Consensus 197 QKnlg-P~Gltvvivs~~al-~~~~~~~p~~ldy~~~---~--~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r 269 (364)
T PRK12462 197 QKNLG-PAGVTVAIIRRALL-ERVPDTLPPMLDFRTH---V--EHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDI 269 (364)
T ss_pred cccCC-CCceEEEEECHHHH-hhccccCCchhhHHHH---H--hcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 99999 99999999987643 2222222333321100 0 0001111111 2334444566777666 99999999
Q ss_pred HHHHHHHHHHHHhcCCCeEEec-cccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHh
Q psy9807 393 QISLAKEFEQLVRSDDRFEVIY-EVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLV 471 (561)
Q Consensus 393 ~~~la~~l~~~l~~~~g~~l~~-~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l 471 (561)
+.+.++.+++.+.+.++|.... .+..
T Consensus 270 ~~~ka~~ly~~id~~~~~~~~~~~~~~----------------------------------------------------- 296 (364)
T PRK12462 270 NARKAAMLYATLDALNEVIDCHAHRAA----------------------------------------------------- 296 (364)
T ss_pred HHHHHHHHHHHHHhCCCcccCCCChhh-----------------------------------------------------
Confidence 9999999999999987665432 1110
Q ss_pred ccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 472 RSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 472 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
...-.|+|+.. ..++..++.+...+.|.+.+.+-.. .+.+|+|+-| ..+.++|+.|++-+++-.+
T Consensus 297 -----------RS~mnv~f~~~-~~~l~~~f~~~a~~~gl~~lkGhr~--vgg~Ras~yn-a~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 297 -----------RSTMNVAFRFR-QPRLDTLFKEQSTEAGFCGLSGHRS--IGGIRASLYN-AVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred -----------cCcceEEEEcC-CHHHHHHHHHHHHHCCCccccCCcc--cCceEEEcCC-CCCHHHHHHHHHHHHHHHH
Confidence 01122666654 3467788899999999877654432 3349999776 5577899999988877543
No 168
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.59 E-value=2.8e-13 Score=141.37 Aligned_cols=219 Identities=12% Similarity=0.115 Sum_probs=144.0
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|...++|+.+ +++.|.+ ..+++++|+.++..++ .. +. + ++++++
T Consensus 47 ~~~p~~~~Le~~l----A~l~g~~-----------~~~~~~sG~aai~~~~-~~----l~------~-------Gd~Viv 93 (377)
T PRK07671 47 TGNPTRAALEELI----AVLEGGH-----------AGFAFGSGMAAITAVM-ML----FS------S-------GDHVIL 93 (377)
T ss_pred CCChHHHHHHHHH----HHHhCCC-----------ceEEeCCHHHHHHHHH-HH----hC------C-------CCEEEE
Confidence 4567777777754 7777765 3488888876554332 11 11 0 234444
Q ss_pred ecccch-HHH----HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 202 SPACTE-LEV----VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 202 ~~s~~s-~~k----aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
....|. ... .+...|++++.++ ..|+++++++|++ ++.+|+++..++.+|.+.|+++|+++|+
T Consensus 94 ~~~~y~~~~~~~~~~~~~~G~~v~~v~----~~d~~~l~~ai~~--------~tklV~le~P~NPtg~~~dl~~I~~la~ 161 (377)
T PRK07671 94 TDDVYGGTYRVMTKVLNRFGIEHTFVD----TSNLEEVEEAIRP--------NTKAIYVETPTNPLLKITDIKKISTIAK 161 (377)
T ss_pred CCCccchHHHHHHHHHhcCCeEEEEEC----CCCHHHHHHhcCC--------CCeEEEEECCCCCCCcccCHHHHHHHHH
Confidence 433322 222 2334577888777 4588999998876 4678888888888999999999999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
++|++++||++|+......| .- ..+|+++.+++||+++|.+ .|++++++......... ...+.
T Consensus 162 ~~g~~lvvD~a~~~~~~~~p----~~---~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~-~~~~~------- 226 (377)
T PRK07671 162 EKGLLTIVDNTFMTPYWQSP----IS---LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHF-VQNST------- 226 (377)
T ss_pred HcCCEEEEECCCCccccCCh----hh---hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHH-HHHhh-------
Confidence 99999999999975332211 11 1459999999999998864 56677766544332211 00110
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+-.......|..++. ...+..++++..++++.+.+.|++.|++.-+
T Consensus 227 -----------g~~~~~~~a~l~~~~--l~tl~~R~~~~~~na~~la~~L~~~~~v~~v 272 (377)
T PRK07671 227 -----------GGILGPQDSWLLLRG--LKTLGIRMEEHETNSRAIAEFLNNHPAVNKV 272 (377)
T ss_pred -----------cCCCCHHHHHHHHcC--cChHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 011233455655554 4446668899999999999999999887644
No 169
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.59 E-value=4.7e-13 Score=134.01 Aligned_cols=327 Identities=13% Similarity=0.063 Sum_probs=205.0
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
.....++-.++.+||+++-|++.- .+-...|+++-+++|++.|...-.+ +. +....++|..
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~Dav----------sLQP~AGAqGE~aGll~Ir~YHe~r----G~-----~~R~~~LIP~ 164 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGMDAV----------SLQPNAGAQGEYAGLLAIRAYHESR----GE-----GHRNICLIPD 164 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcee----------eccCCCCcchhhHHHHHHHHHHHHc----CC-----CcCcEEEeec
Confidence 345678888999999999999742 2445678888899999988765322 11 1122344555
Q ss_pred cc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc-cCHHHHHHHHhhcCc
Q psy9807 204 AC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF-DCLEEIGQVCRQKDV 280 (561)
Q Consensus 204 s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i-dpl~eI~~ia~~~~~ 280 (561)
|. -.--..|.+.|.+|+.|++ ++|.+|+++|++++.+ ...++.+|- .+..|.+ .+|.||+++.|++|.
T Consensus 165 SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~~--------~~AalMiTn-PsT~GvFE~~I~ei~~ivH~~Gg 235 (496)
T COG1003 165 SAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAED--------NLAALMITN-PSTLGVFEEDIREICEIVHEAGG 235 (496)
T ss_pred cccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhcc--------ceeEEEecc-CcccccchhhHHHHHHHHHHcCC
Confidence 55 4444456789999999999 9999999999999977 444455544 4445777 489999999999999
Q ss_pred eEEechhccccc--ccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccC----CCCC
Q psy9807 281 WLHVDAAYAGSA--FICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHD----QQGS 354 (561)
Q Consensus 281 ~lhVDaA~gg~~--~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~----~~~~ 354 (561)
.+..|||---.. +..| |--.+|.+-++.||+|+.|.|-|.=-......-. .-.+||... ..+.
T Consensus 236 ~vY~DGANlNA~vG~~rP-------Gd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~----~L~pfLP~p~~~~~~~~ 304 (496)
T COG1003 236 QVYYDGANLNAIVGLARP-------GDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKA----HLAPFLPGPVVYHDVGE 304 (496)
T ss_pred EEEecCcchhhhhccccc-------cccccceEEeecccccccCCCCCCCCCCceehHh----hccccCCCCcccCCCcc
Confidence 999999832111 1122 2224599999999999999765543332221111 112333321 1111
Q ss_pred -CCCC-CcccccCcCC----cch-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc---ccceeee
Q psy9807 355 -APDY-RHWQIPLGRR----FRS-LKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL---MGLVCFR 424 (561)
Q Consensus 355 -~~~~-~~~~~~~sr~----~~a-l~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~---~~~v~f~ 424 (561)
..++ ..+++.-++. +.+ +..|+-++.+|.+|+++.-+...-+|+|+..+|+. .++++..+. .--+.+.
T Consensus 305 y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild 382 (496)
T COG1003 305 YRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILD 382 (496)
T ss_pred ccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEee
Confidence 0010 1112222222 222 34599999999999999999999999999999986 466643322 1122222
Q ss_pred cccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHH
Q psy9807 425 LKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLK 504 (561)
Q Consensus 425 ~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~ 504 (561)
.+++.- ........+.+
T Consensus 383 ~r~l~~---------------------------------------------------------------~~Gv~~~DvAK 399 (496)
T COG1003 383 ARPLKK---------------------------------------------------------------ETGVRALDVAK 399 (496)
T ss_pred chHhHh---------------------------------------------------------------hcCCcHHHHHH
Confidence 222110 01122457899
Q ss_pred HHHhCCcEEEEee---eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9807 505 RINGNGKIHLVPS---KIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKEE 557 (561)
Q Consensus 505 ~L~~~g~~~~~~~---~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~~ 557 (561)
+|...|.--.+.. ...+. +=+=.+- .-+++++|++++++.++.++..+.+
T Consensus 400 rLlD~GfHaPT~~FPliV~~t--LMIEPTE-sEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 400 RLLDYGFHAPTMYFPLIVAGT--LMIEPTE-SESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred HHHhcCCCCCcccCccccccc--eeecCCC-CCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999885433211 12333 3222232 3356899999999999998876654
No 170
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.59 E-value=2.8e-12 Score=133.05 Aligned_cols=222 Identities=12% Similarity=-0.024 Sum_probs=138.5
Q ss_pred HHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHH
Q psy9807 134 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVM 212 (561)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa 212 (561)
+++.+++.++.+++ ..++|+|++++...++.+..+ + ++++++.... ......+
T Consensus 64 lr~~ia~~~~~~~~---------~i~it~G~~~~l~~~~~~l~~----------~-------gd~Vlv~~p~y~~~~~~~ 117 (351)
T PRK14807 64 LREELARYCSVVPT---------NIFVGNGSDEIIHLIMLAFIN----------K-------GDVVIYPHPSFAMYSVYS 117 (351)
T ss_pred HHHHHHHHhCCCcc---------cEEEecCHHHHHHHHHHHhcC----------C-------CCEEEEeCCChHHHHHHH
Confidence 34445555677653 578888888876554443211 0 2345544433 3344556
Q ss_pred HhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 213 LDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 213 ~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
+..|.+++.++. +++.+|++.+++++.+ . ++.+|+++...+.||.+-+.+++.++|++++.++++|.+|+..
T Consensus 118 ~~~g~~~~~v~~~~~~~~d~~~l~~~~~~--~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~ 190 (351)
T PRK14807 118 KIAGAVEIPVKLKEDYTYDVGSFIKVIEK--Y-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEF 190 (351)
T ss_pred HHcCCeEEEeecCCCCCCCHHHHHHHhhc--c-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhh
Confidence 788999999998 6788999999998864 1 4566777788899999999999999999989999999999743
Q ss_pred cccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcc
Q psy9807 292 AFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFR 370 (561)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~ 370 (561)
............+ --.+..+++|.++.|. -+|.+.. +...+.........| . ..
T Consensus 191 --~~~~~~~~~~~~~-~vi~~~S~SK~~~~~GlRiG~~v~-~~~~~~~~~~~~~~~---------------~------~~ 245 (351)
T PRK14807 191 --YGNTIVDVINEFE-NLIVLRTLSKAFGLAGLRVGYAVA-NENILKYLNLVKSPY---------------N------IN 245 (351)
T ss_pred --cccchHHHhhhCC-CEEEEecchHhcccchhceeeeec-CHHHHHHHHHccCCC---------------C------cC
Confidence 2211111111111 1366789999997553 4555554 444333221111111 0 11
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 371 SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 371 al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
.+...++.+.+....+++++++..+..+++.+.|++.+|+++.
T Consensus 246 ~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~ 288 (351)
T PRK14807 246 SLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY 288 (351)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC
Confidence 2223333444433456777777777788888888877887754
No 171
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.58 E-value=4.5e-13 Score=139.92 Aligned_cols=220 Identities=12% Similarity=0.114 Sum_probs=143.3
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
....|....+|+.+ +++.|.+ ..+++++|+.|+..++ .+ +. + +++++
T Consensus 46 r~~~p~~~~Le~~l----a~l~g~~-----------~al~~~SG~~Al~~~l-~~----l~------p-------Gd~Vi 92 (380)
T PRK06176 46 RSGNPTRFALEELI----ADLEGGV-----------KGFAFASGLAGIHAVF-SL----FQ------S-------GDHVL 92 (380)
T ss_pred CCCChhHHHHHHHH----HHHhCCC-----------CEEEECCHHHHHHHHH-HH----cC------C-------CCEEE
Confidence 34567777777755 7777764 3588899987765332 21 11 0 22444
Q ss_pred Eecccc--h---HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 201 ASPACT--E---LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 201 v~~s~~--s---~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+....| + +...+...|++++.++ ..|++++++++.+ .+.+|+++..++.+|.+.|+++|+++|
T Consensus 93 ~~~~~y~~t~~~~~~~~~~~gi~v~~vd----~~d~e~l~~ai~~--------~t~lV~lesP~Nptg~~~di~~I~~la 160 (380)
T PRK06176 93 LGDDVYGGTFRLFDKVLVKNGLSCTIID----TSDLSQIKKAIKP--------NTKALYLETPSNPLLKITDLAQCASVA 160 (380)
T ss_pred EcCCChhHHHHHHHHHHHhcCeEEEEcC----CCCHHHHHHhcCc--------CceEEEEECCCCCCceecCHHHHHHHH
Confidence 432222 1 2233445677777776 3478999988866 567888888889999999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
++||++++||++|+......| .- -.+|.++.++||++++|.+ .|++..++......... +...
T Consensus 161 ~~~gi~vivD~t~a~~~~~~p----~~---~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~-----~~~~--- 225 (380)
T PRK06176 161 KDHGLLTIVDNTFATPYYQNP----LL---LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAF-----FQNA--- 225 (380)
T ss_pred HHcCCEEEEECCccccccCCc----cc---cCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHH-----HHHH---
Confidence 999999999999985432211 11 1469999999999998864 66666655443222110 0000
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
.+....+...|..++ |...+..+++++.+++..+.+.|+++|.+.-+
T Consensus 226 -----------~G~~~~~~~~~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v 272 (380)
T PRK06176 226 -----------IGGVLGPQDSWLLQR--GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKV 272 (380)
T ss_pred -----------hcCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 001112233454433 55566788899999999999999999887644
No 172
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.58 E-value=5.1e-12 Score=133.63 Aligned_cols=254 Identities=11% Similarity=-0.027 Sum_probs=145.1
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|...+...++.+.+.+++....|.+-. ....++|+|+|+|+..++.+.... +++++
T Consensus 69 Y~~~~g~~~lr~~ia~~l~~~~~~~~~-------~~~ii~t~G~t~al~~~~~~l~~~-----------------gd~Vl 124 (403)
T TIGR01265 69 YAPSVGALAAREAVAEYLSSDLPGKLT-------ADDVVLTSGCSQAIEICIEALANP-----------------GANIL 124 (403)
T ss_pred CCCCCCCHHHHHHHHHHHHhhcCCCCC-------HHHEEEecChHHHHHHHHHHhCCC-----------------CCEEE
Confidence 333334455666666666654443211 125789999999987776653210 23455
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHH
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQ 273 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~ 273 (561)
+.... ..+...+...|.+++.++. +++.+|++.+++.+.+ .+.+++.+..++.||.+- ++++|.+
T Consensus 125 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~i~~p~NPtG~~~~~~~~~~i~~ 196 (403)
T TIGR01265 125 VPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE--------KTVAIVVINPSNPCGSVFSRDHLQKIAE 196 (403)
T ss_pred EeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc--------CccEEEEecCCCCCCCCCCHHHHHHHHH
Confidence 54444 4455566777888888876 3568999999998865 355677777888999885 4899999
Q ss_pred HHhhcCceEEechhcccccccCccccccccCcc-cc-ceeeecCCcccccc-ccceeEEecCh-hhHHHhh-ccCCCccc
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE-LA-DSFNFNPHKWMLVT-FDCSAMWLKDP-SWVVNAF-NVDPLYLK 348 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~-~a-Dsi~~~~HK~l~~P-~g~g~l~~r~~-~~l~~~~-~~~~~yl~ 348 (561)
+|+++|+|+++|++|+....-.+.... +..+. .. =.+..++.|.++.| .-+|.+...++ ..+...+ .....+..
T Consensus 197 ~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~ 275 (403)
T TIGR01265 197 VARKLGIPIIADEIYGHMVFGDAPFIP-MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQ 275 (403)
T ss_pred HHHHCCCEEEEEccccccccCCCCccc-hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhh
Confidence 999999999999998854321111111 11111 11 14567899987777 34777776443 1111100 00000000
Q ss_pred cCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Q psy9807 349 HDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 420 (561)
Q Consensus 349 ~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~ 420 (561)
.. . ....+....+-..+......-+++..++..+..+++.+.|+..+++++..+....-
T Consensus 276 ~~------------~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f 334 (403)
T TIGR01265 276 RI------------L-GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMY 334 (403)
T ss_pred hh------------c-CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeE
Confidence 00 0 00001111111122222234556667777777888889998887876544433333
No 173
>PLN02187 rooty/superroot1
Probab=99.58 E-value=3.9e-12 Score=136.41 Aligned_cols=321 Identities=8% Similarity=0.006 Sum_probs=187.8
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|...+...++.+.+.+|+.+.+|++-+ ....++|+|++++...++.+..+ + ++.+
T Consensus 103 ~Y~~~~G~~~lR~aiA~~~~~~~~~~~~-------~~~I~it~G~~~al~~~~~~l~~----------p-------Gd~V 158 (462)
T PLN02187 103 SYGPGAGILPARRAVADYMNRDLPHKLT-------PEDIFLTAGCNQGIEIVFESLAR----------P-------NANI 158 (462)
T ss_pred CCCCCCChHHHHHHHHHHHHHhcCCCCC-------cccEEEeCCHHHHHHHHHHHhcC----------C-------CCEE
Confidence 3444555667888888998877665321 13678999999987666554311 0 2345
Q ss_pred EEecccch-HHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHH
Q psy9807 200 IASPACTE-LEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIG 272 (561)
Q Consensus 200 vv~~s~~s-~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~ 272 (561)
++....|. ....+...|.+++.++. +++.+|+++|++++.+ .+.+++.+.-++.||.+-+ +++|+
T Consensus 159 lv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~--------~~~~v~i~nP~NPTG~v~s~e~l~~i~ 230 (462)
T PLN02187 159 LLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADE--------NTVAMVVINPNNPCGNVYSHDHLKKVA 230 (462)
T ss_pred EEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCC--------CcEEEEEeCCCCCCCCccCHHHHHHHH
Confidence 55544444 44456778899998887 4689999999988865 4556777777899999866 88899
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCcc-cc-ceeeecCCcccccccc-ceeEEecChhhHH---HhhccCCCc
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE-LA-DSFNFNPHKWMLVTFD-CSAMWLKDPSWVV---NAFNVDPLY 346 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~-~a-Dsi~~~~HK~l~~P~g-~g~l~~r~~~~l~---~~~~~~~~y 346 (561)
++|++||+|+++|.+|+-...-.+.... +..+. .. =.+..++.|.++.|.- +|.++..++..+. ..+.....+
T Consensus 231 ~~a~~~~i~iI~DE~Y~~l~f~~~~~~s-~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~ 309 (462)
T PLN02187 231 ETARKLGIMVISDEVYDRTIFGDNPFVS-MGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQN 309 (462)
T ss_pred HHHHHCCCEEEEeccccccccCCCCcee-HHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHh
Confidence 9999999999999999853321111111 11111 11 1455689999887754 6777664432111 111110010
Q ss_pred cccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceee
Q psy9807 347 LKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL---GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 423 (561)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f 423 (561)
.. +.. ....+..++....+ ....+++..+...+..+++.+.|++++++.....|..+...|
T Consensus 310 ~~--------------~~~--~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~ 373 (462)
T PLN02187 310 LD--------------VTP--DPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLL 373 (462)
T ss_pred cc--------------ccC--CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEE
Confidence 00 000 00122222233333 235567777777888888999998876543333343333222
Q ss_pred -ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHH
Q psy9807 424 -RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKL 502 (561)
Q Consensus 424 -~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l 502 (561)
++.... ..+.. ...++
T Consensus 374 ~~l~~~~--------------------------------------------------------------~~~~~-~~~~~ 390 (462)
T PLN02187 374 TKLELSL--------------------------------------------------------------MDNIK-DDIDF 390 (462)
T ss_pred eecChhh--------------------------------------------------------------CCCCC-CHHHH
Confidence 111000 00000 02244
Q ss_pred HHHH-HhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 503 LKRI-NGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 503 ~~~L-~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
...+ .+.|..+..+.......++|++++. .++.+++.++.|.+..++..+
T Consensus 391 ~~~ll~~~gV~v~pG~~fg~~~~iRis~~~---~~e~l~~al~rL~~~l~~~~~ 441 (462)
T PLN02187 391 CVKLAREENLVFLPGDALGLKNWMRITIGV---EAHMLEDALERLKGFCTRHAK 441 (462)
T ss_pred HHHHHhhCCEEEECccccCCCCeEEEEeCC---CHHHHHHHHHHHHHHHHHhhh
Confidence 4444 5666555544444445799999875 467889999888887765543
No 174
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.58 E-value=2.2e-12 Score=131.64 Aligned_cols=253 Identities=14% Similarity=0.105 Sum_probs=163.9
Q ss_pred HHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 108 DILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAH 187 (561)
Q Consensus 108 ~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~ 187 (561)
+.+...+..+.. ..+|...++|+ ++++.+|.+. ++.+++||.|+.+||.+.- + +
T Consensus 19 ~~v~~vl~sg~i--~~G~~v~~FE~----~~ae~~G~k~-----------ava~~sgT~AL~laL~al~---i---g--- 72 (374)
T COG0399 19 AAVQEVLKSGWL--TGGPFVRRFEQ----AFAEYLGVKY-----------AVAVSSGTAALHLALLALA---I---G--- 72 (374)
T ss_pred HHHHHHHHcCCe--ecChHHHHHHH----HHHHHhCCCe-----------EEEecChHHHHHHHHHhcC---C---C---
Confidence 344444443332 23888899998 5588888864 5999999999999887532 1 1
Q ss_pred CCCCCcccccceEEeccc--chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCc
Q psy9807 188 PDWKDSDIIANLIASPAC--TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC 263 (561)
Q Consensus 188 ~~~~~~~~~~~~vv~~s~--~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG 263 (561)
.+..|+..|- .+-..+....|.+.+.|++ +.+.||++.||++|.+ ++++|+.++ ..|
T Consensus 73 --------~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~--------~tKAIipVh---l~G 133 (374)
T COG0399 73 --------PGDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITP--------RTKAIIPVH---LAG 133 (374)
T ss_pred --------CCCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHccc--------CCeEEEEeh---hcc
Confidence 1234455454 4444455668999999999 6789999999999988 467777644 457
Q ss_pred cccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhh--c
Q psy9807 264 AFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAF--N 341 (561)
Q Consensus 264 ~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~--~ 341 (561)
...++++|.++|++||++++-|+||+-+...-.+. +-.+..+-+++|-++|.+.+- .-|++.+.|.+...+.. .
T Consensus 134 ~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~---vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr 209 (374)
T COG0399 134 QPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKK---VGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLR 209 (374)
T ss_pred CCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcc---cccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHH
Confidence 77899999999999999999999988554332221 112344577888888988654 66777777765444332 1
Q ss_pred cCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q psy9807 342 VDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV 416 (561)
Q Consensus 342 ~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~ 416 (561)
....- .+....+... ..+-..+--.+-+++...-.+.++++.++..+++++..+.|++.+++.+..++
T Consensus 210 ~hG~~-----~~~~~~y~~~--~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~ 277 (374)
T COG0399 210 NHGLS-----RDAVFKYLHE--ELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEP 277 (374)
T ss_pred HhCcC-----CCccccceee--ecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Confidence 11000 0000111111 12222233333344444456678889999999999999999998876665443
No 175
>PRK05939 hypothetical protein; Provisional
Probab=99.58 E-value=2.6e-13 Score=142.28 Aligned_cols=237 Identities=16% Similarity=0.104 Sum_probs=145.8
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|...++|+++ +++.|.. ..+.+++|+.|+..++.+... + ++++++
T Consensus 44 ~g~p~~~~lE~~l----a~leg~~-----------~~v~~ssG~~Ai~~~l~all~----------~-------Gd~Vv~ 91 (397)
T PRK05939 44 QGTPTTAALEAKI----TKMEGGV-----------GTVCFATGMAAIAAVFLTLLR----------A-------GDHLVS 91 (397)
T ss_pred CCCHHHHHHHHHH----HHHhCCC-----------eEEEeCCHHHHHHHHHHHHcC----------C-------CCEEEE
Confidence 4568888888866 6666664 347888888887666654211 0 234444
Q ss_pred eccc----chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 202 SPAC----TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 202 ~~s~----~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
.... .++...+...|++++.++. .|+++|++++.+ ++.+|+++..++.+|.+.|+++|+++|++
T Consensus 92 ~~~~y~~t~~~~~~l~~~G~~v~~v~~----~d~e~l~~~l~~--------~tklV~vesp~NptG~v~dl~~I~~la~~ 159 (397)
T PRK05939 92 SQFLFGNTNSLFGTLRGLGVEVTMVDA----TDVQNVAAAIRP--------NTRMVFVETIANPGTQVADLAGIGALCRE 159 (397)
T ss_pred CCCccccHHHHHHHHHhcCCEEEEECC----CCHHHHHHhCCC--------CCeEEEEECCCCCCCCHHhHHHHHHHHHH
Confidence 3332 2344455567888888883 478999998866 57788888999999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEecChhh-HHHhhccCCCccccCC-CCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPSW-VVNAFNVDPLYLKHDQ-QGS 354 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~-l~~~~~~~~~yl~~~~-~~~ 354 (561)
+|++++||++|+....+.+. .. .+|.+..++||+++++.. .|..++.+... ..........|..... ...
T Consensus 160 ~gi~livD~t~a~~~~~~~~----~~---gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (397)
T PRK05939 160 RGLLYVVDNTMTSPWLFRPK----DV---GASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWG 232 (397)
T ss_pred cCCEEEEECCcccccccCcc----cc---CCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHH
Confidence 99999999999754332221 11 369999999999997643 13333322110 0000000000000000 000
Q ss_pred CCCCCc-ccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 355 APDYRH-WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 355 ~~~~~~-~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
...... .....+-...+...|+.+ .|.+.+..+++++.++|..+++.|++.|.++
T Consensus 233 ~~~~~~~~~~~~G~~~~p~~a~l~~--rgl~tl~~R~~~~~~na~~la~~L~~~p~V~ 288 (397)
T PRK05939 233 LTQIRKKGLRDMGATLSSEAAHRIA--IGAETLALRVDRSCSNALALAQFLEAHPKVA 288 (397)
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHH--cCcCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 000000 000011112334445444 4666788899999999999999999998764
No 176
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.58 E-value=2.3e-12 Score=136.30 Aligned_cols=314 Identities=12% Similarity=-0.003 Sum_probs=189.3
Q ss_pred hhhHHHHHHHHHHHHHhcCCC-ccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 125 PACTELEVVMLDWLGKMLDLP-KEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
+...++-+.+.+|+.+..|.. -+. ....++|+|++++...++.+..+ + ++.+++..
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~------~~~I~it~Gs~~al~~~~~~~~~----------~-------gd~Vlv~~ 137 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDP------VTEVIHSIGSKPALAMLPSCFIN----------P-------GDVTLMTV 137 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCC------cceEEEccCHHHHHHHHHHHhCC----------C-------CCEEEEeC
Confidence 455788889999998887764 210 01477888888876554433211 0 22344444
Q ss_pred ccch-HHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHh
Q psy9807 204 ACTE-LEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCR 276 (561)
Q Consensus 204 s~~s-~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~ 276 (561)
..|. ....++..|.+++.+|. . ++.+|+++|++.+.+ .+.+|+.+..++.||.+-+ +++|.++|+
T Consensus 138 P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~--------~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~ 209 (410)
T PRK06290 138 PGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE--------KAKLLYLNYPNNPTGAVATKEFYEEVVDFAK 209 (410)
T ss_pred CCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc--------cceEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 4444 44556778999999998 3 356799999888865 4567777777899999977 578888899
Q ss_pred hcCceEEechhcccccccCccccccc--cCccccceeeecCCcccccccc-ceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLM--KGVELADSFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~--~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
+||+|+++|.+|+.... ........ .+....+.+..++.|.++.|.- +|.+. .+...+.........+...
T Consensus 210 ~~~~~iI~DEaY~~~~~-~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii-~~~~l~~~l~~~~~~~~~~---- 283 (410)
T PRK06290 210 ENNIIVVQDAAYAALTF-DGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVV-GNELIVKAFATVKDNNDSG---- 283 (410)
T ss_pred HcCeEEEEecchhhcee-CCCCcChhcCCCccccEEEEeechhhcCCchhheEeEE-eCHHHHHHHHHHHhccccC----
Confidence 99999999999985322 11111111 1112236888999999976643 45544 4554433221111111000
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceee-ecccCccc
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF-RLKHWQIP 431 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f-~~~~~~~~ 431 (561)
...+...++...+- ...+++..++..+..+++.+.|++. |+.+.. ++.+...| ++.+....
T Consensus 284 ---------------~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-p~g~f~l~v~lp~~~~~ 346 (410)
T PRK06290 284 ---------------QFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAEM-PGGTFYLYVKAPKGTKS 346 (410)
T ss_pred ---------------CcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeecC-CCeeeEEEEECCCcccc
Confidence 00011112222221 1234556666677788888989887 776553 34444333 32210000
Q ss_pred cccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCc
Q psy9807 432 LGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGK 511 (561)
Q Consensus 432 ~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~ 511 (561)
+ . . .....++.+.|.++|.
T Consensus 347 -~----------------------------------------------------------~-~-~~~~~~~~~~Ll~~~~ 365 (410)
T PRK06290 347 -G----------------------------------------------------------I-K-FENAEEFSQYLIKEKL 365 (410)
T ss_pred -C----------------------------------------------------------C-C-CCCHHHHHHHHHHhCC
Confidence 0 0 0 0113478899998877
Q ss_pred EEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 512 IHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 512 ~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
+.+.+.... ..++|++++.+..++++.++++++|.+...++.
T Consensus 366 v~~~p~~~~-~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 366 ISTVPWDDA-GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred EEEECCccc-cCeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 665443212 248999999888899999999999998877653
No 177
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.57 E-value=3.1e-12 Score=135.69 Aligned_cols=353 Identities=13% Similarity=0.053 Sum_probs=198.0
Q ss_pred CCccccccCCCCCC------hHHHHHHHHHhhcccc-ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE
Q psy9807 88 HSPKFHAYFPTANS------YPAIVADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI 160 (561)
Q Consensus 88 ~~p~~~~~~~~~~~------~~~~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~ 160 (561)
.++..+.+..+.+. ++..+.+.+...++.. ...|.......++-+.+.+|+.+.++.++.... .-+....++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~-~~~~~~i~i 109 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKS-TIKKDNVVL 109 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccC-CCChhhEEE
Confidence 44555555543332 3455556666655542 233433334678888899998876541100000 000136789
Q ss_pred eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHH
Q psy9807 161 QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGG 236 (561)
Q Consensus 161 t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~ 236 (561)
|+|+++++..++.+.... ++.+++.... ......+...|.+++.+|. +++.+|+++|++
T Consensus 110 t~G~~~al~~~~~~~~~~-----------------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~ 172 (412)
T PTZ00433 110 CSGVSHAILMALTALCDE-----------------GDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRR 172 (412)
T ss_pred eCChHHHHHHHHHHhcCC-----------------CCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHH
Confidence 999999987666543210 2244444444 5566667888999999987 356899999998
Q ss_pred HHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHHHHhhcCceEEechhcccccccCccccccccCcc-c-ccee
Q psy9807 237 VIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE-L-ADSF 311 (561)
Q Consensus 237 ~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~-~-aDsi 311 (561)
.+.+ .+.+|+.+..++.||.+- .+++|+++|++||+++++|.+|.....-...... +..+. . .-.+
T Consensus 173 ~~~~--------~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~ 243 (412)
T PTZ00433 173 LVDD--------RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTS-VADFDTTVPRVI 243 (412)
T ss_pred Hhcc--------CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccc-hhhccCCCceEE
Confidence 8865 456677777788899764 5788899999999999999999743221111111 11111 1 1245
Q ss_pred eecCCcccccc-ccceeEEecCh----hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh---hH
Q psy9807 312 NFNPHKWMLVT-FDCSAMWLKDP----SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL---GV 383 (561)
Q Consensus 312 ~~~~HK~l~~P-~g~g~l~~r~~----~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~---g~ 383 (561)
..++.|.++.| .-+|.++..++ ..+...+........ ....+...+....+ ..
T Consensus 244 ~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~-------------------~~~~~~q~a~~~~l~~~~~ 304 (412)
T PTZ00433 244 LGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVC-------------------GPCSVVQAALGEALLNTPQ 304 (412)
T ss_pred EccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccC-------------------CCChHHHHHHHHHHhcCcH
Confidence 77899998666 45777776322 112111211000000 00111112222222 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHH
Q psy9807 384 KYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISL 463 (561)
Q Consensus 384 ~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~ 463 (561)
..+++..++..+..+.+.+.|++..++.+..+.....+.+++....+
T Consensus 305 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~--------------------------------- 351 (412)
T PTZ00433 305 EHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKF--------------------------------- 351 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhhc---------------------------------
Confidence 44566666777778888888887656654433323232222211000
Q ss_pred HHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHh-CCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHH
Q psy9807 464 AKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRING-NGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYS 542 (561)
Q Consensus 464 a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l 542 (561)
.+. ....++.+.|.+ .|..+..+.......++|+++.. .++++++.
T Consensus 352 -----------------------------~~~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~l~~a 398 (412)
T PTZ00433 352 -----------------------------RDI-KSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR---PVEVLREA 398 (412)
T ss_pred -----------------------------CCC-CCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC---CHHHHHHH
Confidence 000 012467788775 56555444433335699999874 36788888
Q ss_pred HHHHHHHHHH
Q psy9807 543 WNEIKTLTEE 552 (561)
Q Consensus 543 ~~~l~~~~~~ 552 (561)
++.|.++.++
T Consensus 399 l~~l~~~~~~ 408 (412)
T PTZ00433 399 VERIKAFCER 408 (412)
T ss_pred HHHHHHHHHH
Confidence 8888776654
No 178
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.57 E-value=4.1e-13 Score=142.16 Aligned_cols=239 Identities=13% Similarity=0.097 Sum_probs=146.3
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
+....|...++|+. ++++.|.+ ..++++||+.|+..++.+.... ++++
T Consensus 52 sr~~~p~~~~le~~----lA~l~g~~-----------~~v~~~sG~~Ai~~al~~l~~~-----------------Gd~V 99 (418)
T TIGR01326 52 SRLMNPTTDVLEQR----IAALEGGV-----------AALAVASGQAAITYAILNLAQA-----------------GDNI 99 (418)
T ss_pred ECCCChhHHHHHHH----HHHHhCCC-----------eEEEEccHHHHHHHHHHHHhCC-----------------CCEE
Confidence 34455666666665 57777764 3599999999988877654211 2244
Q ss_pred EEecccc-----hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH
Q psy9807 200 IASPACT-----ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 200 vv~~s~~-----s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
++....| .+...+...|.+++.++. .|+++++++|.+ ++.+|++...++.+|.+.|+++|+++
T Consensus 100 l~~~~~y~~t~~~~~~~~~~~G~~v~~v~~----~d~~~l~~~l~~--------~t~~V~le~p~NPtg~v~dl~~I~~l 167 (418)
T TIGR01326 100 VSSSYLYGGTYNLFKHTLKRLGIEVRFVDP----DDPEEFEKAIDE--------NTKAVFAETIGNPAINVPDIEAIAEV 167 (418)
T ss_pred EEECCCcHHHHHHHHHHHHHcCcEEEEECC----CCHHHHHHhcCc--------CCeEEEEECCCCCCCeecCHHHHHHH
Confidence 4443322 223445567888888873 388999998866 45677778888889999999999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEecChhhHHHhhccCCCccccCCC-
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLYLKHDQQ- 352 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~yl~~~~~- 352 (561)
|++||++++||++|+.+....+ .. ..+|.++.++||+++.+.. .|.+++........ .... ..+.....
T Consensus 168 a~~~~i~livD~t~~~~~~~~~----l~---~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~-~~~~-~~~~~~~~~ 238 (418)
T TIGR01326 168 AHAHGVPLIVDNTFATPYLCRP----ID---HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWA-NGRF-PLFTTPDPS 238 (418)
T ss_pred HHHcCCEEEEECCCchhhcCCc----hh---cCCeEEEECccccccCCccceEEEEEeccccccc-cccc-ccccCCCCc
Confidence 9999999999999985432221 11 1369999999999987543 55566643221110 0000 00000000
Q ss_pred --CCCCCC-----------C-cccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 353 --GSAPDY-----------R-HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 353 --~~~~~~-----------~-~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+..... + ......+-.......|..++ |...+..++++..+++..+.+.|.+.|++..+
T Consensus 239 q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~--~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V 311 (418)
T TIGR01326 239 YHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQ--GLETLSLRMERHVENALKVAEFLEAHPKVAWV 311 (418)
T ss_pred cccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHC--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 000000 0 00000011112334454333 44556777888888999999999999987654
No 179
>PLN02656 tyrosine transaminase
Probab=99.57 E-value=2.9e-12 Score=135.70 Aligned_cols=263 Identities=11% Similarity=-0.001 Sum_probs=155.7
Q ss_pred HHHHHHHhhcccc-ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q psy9807 105 IVADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRV 183 (561)
Q Consensus 105 ~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~ 183 (561)
.+.+.+..++..+ ...|.......++.+.+.+|+.+..|.+-+ ....++|+|+|++...++.+..+.
T Consensus 52 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~~~----- 119 (409)
T PLN02656 52 VAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLS-------LDDVFITSGCTQAIDVALSMLARP----- 119 (409)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-------cccEEEeCChHHHHHHHHHHHhCC-----
Confidence 3444444444332 234544555678889999999887765421 136789999999876665542110
Q ss_pred HhcCCCCCCcccccceEEecccch-HHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 184 KEAHPDWKDSDIIANLIASPACTE-LEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 184 ~~~~~~~~~~~~~~~~vv~~s~~s-~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
++.+++....|. ....+...|.+++.+|+ . ++.+|+++|++.+.+ .+.+|+.+..+
T Consensus 120 ------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~P~ 179 (409)
T PLN02656 120 ------------GANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ--------NTVALVIINPG 179 (409)
T ss_pred ------------CCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc--------CceEEEEECCC
Confidence 224444444443 44456678899999998 2 457999999988865 45567777788
Q ss_pred CCCccc---cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccc--cceeeecCCcccccc-ccceeEEecC-
Q psy9807 260 TNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVEL--ADSFNFNPHKWMLVT-FDCSAMWLKD- 332 (561)
Q Consensus 260 t~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~--aDsi~~~~HK~l~~P-~g~g~l~~r~- 332 (561)
+.||.+ +++++|+++|++||+|+++|.+|+....-...... +..+.. -=.+..++.|.++.| .=+|.++..+
T Consensus 180 NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~ 258 (409)
T PLN02656 180 NPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVP-MGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDP 258 (409)
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCccc-HHHhcccCcEEEEcccchhccCcceeEEEEEEeCc
Confidence 899988 57999999999999999999999843321111111 101111 124567899987766 4477777643
Q ss_pred ------hhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHH
Q psy9807 333 ------PSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL---GVKYLQEYIRKQISLAKEFEQL 403 (561)
Q Consensus 333 ------~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~---g~~g~~~~~~~~~~la~~l~~~ 403 (561)
...+. .+........ ....+..+++...+ ....+++..+...+..+.+.+.
T Consensus 259 ~~~~~~~~~~~-~~~~~~~~~~-------------------~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~ 318 (409)
T PLN02656 259 SGSFRDPKIVE-RIKKYFDILG-------------------GPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDR 318 (409)
T ss_pred ccccccHHHHH-HHHHHHhhhc-------------------CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 2211000000 01112222223333 2345666677777778888888
Q ss_pred HhcCCCeEEeccccccc
Q psy9807 404 VRSDDRFEVIYEVLMGL 420 (561)
Q Consensus 404 l~~~~g~~l~~~~~~~~ 420 (561)
|++++++....+|..+.
T Consensus 319 L~~~~~~~~~~~p~gg~ 335 (409)
T PLN02656 319 IKEIPCITCPHKPEGSM 335 (409)
T ss_pred HhhCCCCcCCcCCCeEE
Confidence 88876544333444444
No 180
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.57 E-value=4.4e-13 Score=139.61 Aligned_cols=232 Identities=16% Similarity=0.184 Sum_probs=152.2
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|...++|+. ++++.|.+. .++++||+.|+..++ .. +.. ++++++
T Consensus 49 ~~~pt~~~le~~----la~l~g~~~-----------~~~~~sG~~ai~~~~-~l----l~~-------------Gd~Vl~ 95 (366)
T PRK08247 49 TGNPTRGVLEQA----IADLEGGDQ-----------GFACSSGMAAIQLVM-SL----FRS-------------GDELIV 95 (366)
T ss_pred CCCchHHHHHHH----HHHHhCCCc-----------EEEEcCHHHHHHHHH-HH----hCC-------------CCEEEE
Confidence 345666777775 488888753 488999988775433 21 110 224444
Q ss_pred ecccc----h-HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 202 SPACT----E-LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 202 ~~s~~----s-~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
....| . +...+...|++++.++ ..|++++++++.+ .+.+|++...++.+|.+.++++|+++|+
T Consensus 96 ~~~~y~~t~~~~~~~~~~~G~~v~~vd----~~d~~~l~~~i~~--------~tklv~le~P~NP~~~~~dl~~I~~la~ 163 (366)
T PRK08247 96 SSDLYGGTYRLFEEHWKKWNVRFVYVN----TASLKAIEQAITP--------NTKAIFIETPTNPLMQETDIAAIAKIAK 163 (366)
T ss_pred ecCCcCcHHHHHHHHhhccCceEEEEC----CCCHHHHHHhccc--------CceEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 43332 2 2334455788888887 3588999998866 4667888777788999999999999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
+||+++++|.+|+......| . . ..+|.++.+++|+++++.+ .|++..++.......... ..+. +
T Consensus 164 ~~g~~lIvD~t~~~~~~~~p-~---~---~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~-~~~~-----g- 229 (366)
T PRK08247 164 KHGLLLIVDNTFYTPVLQRP-L---E---EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYY-QNAA-----G- 229 (366)
T ss_pred HcCCEEEEECCCccccccCc-h---h---cCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHH-HHhc-----C-
Confidence 99999999999975443322 1 1 2459999999999997654 455555444332221110 0000 0
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-ccccccceeeecc
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI-YEVLMGLVCFRLK 426 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~-~~~~~~~v~f~~~ 426 (561)
.....+..|..++ +.+.+..++++..+++..+.+.|+++|++..+ .|+..++++|.++
T Consensus 230 ------------~~~s~~~a~l~~~--~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 230 ------------AVLSPFDSWLLIR--GMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred ------------CCCChHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence 0112233455555 33456677888899999999999999998854 4447888888654
No 181
>PRK07777 aminotransferase; Validated
Probab=99.57 E-value=2.8e-12 Score=134.91 Aligned_cols=246 Identities=13% Similarity=0.061 Sum_probs=149.9
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 119 FTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 119 ~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
..|...+...++.+.+.+|+.+.+|.+.+. ....++|+|||+++..++.+... + ++.
T Consensus 55 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~------~~~i~~t~G~~~al~~~~~~~~~----------~-------gd~ 111 (387)
T PRK07777 55 NQYPPGPGIPELRAAIAAQRRRRYGLEYDP------DTEVLVTVGATEAIAAAVLGLVE----------P-------GDE 111 (387)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCC------CCcEEEeCCcHHHHHHHHHHhcC----------C-------CCE
Confidence 345555566789999999999888875320 01478999999998665543210 0 234
Q ss_pred eEEeccc-chHHHHHHhccCCeEEeeC-C---CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHH
Q psy9807 199 LIASPAC-TELEVVMLDWLGKMLDLPK-E---FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEE 270 (561)
Q Consensus 199 ~vv~~s~-~s~~kaa~~~g~~v~~v~~-~---~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~e 270 (561)
+++.... .....++...|.+++.+|. + ++.+|+++|++.+.+ .+.+|+++...+.||.+- ++++
T Consensus 112 vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~~~~~~~~ 183 (387)
T PRK07777 112 VLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTP--------RTRALIVNSPHNPTGTVLTAAELAA 183 (387)
T ss_pred EEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCc--------ccEEEEEcCCCCCCCccCCHHHHHH
Confidence 5554444 4455666778888888887 3 346999999998865 455677776778888874 5889
Q ss_pred HHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCcc
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYL 347 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl 347 (561)
|+++|++|++++++|.+|+....-....... ..+....+.+..+++|.++.|. -+|.+.. +...+.. +.....|.
T Consensus 184 l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~~-~~~~~~~~ 261 (387)
T PRK07777 184 IAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACG-PAPLIAA-VRAAKQYL 261 (387)
T ss_pred HHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEec-CHHHHHH-HHHHHhhc
Confidence 9999999999999999997533211111111 1122234788999999998663 2576665 3333322 21111111
Q ss_pred ccCCCCCCCCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 348 KHDQQGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
... .+... .++..| +. .+...+++..+...+..+++.+.|++. ++++..+
T Consensus 262 ~~~--------------~~~~~q~~~~~~--l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 312 (387)
T PRK07777 262 TYV--------------GGAPFQPAVAHA--LD-HEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDS 312 (387)
T ss_pred ccC--------------CCCHHHHHHHHH--Hh-CCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCC
Confidence 000 00000 011111 11 133445666677778888899999886 6665544
No 182
>PRK12414 putative aminotransferase; Provisional
Probab=99.57 E-value=1.9e-12 Score=136.03 Aligned_cols=181 Identities=10% Similarity=0.033 Sum_probs=121.2
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++.+.+.+|+++.+|.+-+. ....++|+||++++..++.+..+ + ++++
T Consensus 61 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~------~~~i~it~g~~~al~~~~~~l~~----------~-------gd~V 117 (384)
T PRK12414 61 QYAPMAGIAALREALAEKTERLYGARYDP------ASEVTVIASASEGLYAAISALVH----------P-------GDEV 117 (384)
T ss_pred CcCCCCCcHHHHHHHHHHHHHHhCCCCCC------CCcEEEECChHHHHHHHHHHhcC----------C-------CCEE
Confidence 34444456788899999999999985210 02578999999987655543211 0 2345
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIGQ 273 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~~ 273 (561)
++.... ......++..|.+++.+|. +++.+|++.|++++.+ .+.+|+++..++.||.+ +++++|++
T Consensus 118 lv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~--------~~~~v~i~~p~NPTG~~~s~~~~~~i~~ 189 (384)
T PRK12414 118 IYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITP--------RTRMIIVNTPHNPSATVFSAADLARLAQ 189 (384)
T ss_pred EEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCc--------ccEEEEEcCCCCCCCcCCCHHHHHHHHH
Confidence 554444 4455556777889999998 3568999999998865 46677777888899987 57899999
Q ss_pred HHhhcCceEEechhcccccccCccccccc--cCccccceeeecCCcccccccc-ceeEEec
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLM--KGVELADSFNFNPHKWMLVTFD-CSAMWLK 331 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~--~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r 331 (561)
+|++||+|+++|.+|.-...-........ .....--.+..+++|.++.|.- +|.+...
T Consensus 190 ~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~ 250 (384)
T PRK12414 190 LTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAP 250 (384)
T ss_pred HHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecC
Confidence 99999999999999874222111111111 1111123788899999976643 5666653
No 183
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.57 E-value=3.4e-13 Score=139.88 Aligned_cols=233 Identities=14% Similarity=0.101 Sum_probs=153.5
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
+....|...++|+.+ +++.|.+ .+++++||++|+..++.+. . . ++++
T Consensus 49 ~R~~~p~~~~le~~l----A~leg~~-----------~~v~~~sG~aAi~~~l~~l-~--------~---------GD~V 95 (364)
T PRK07269 49 TRTKNPTRAKLEETL----AAIESAD-----------YALATSSGMSAIVLAFSVF-P--------V---------GSKV 95 (364)
T ss_pred eCCCCccHHHHHHHH----HHHhCCC-----------eEEEeCCHHHHHHHHHHHh-C--------C---------CCEE
Confidence 344678888888876 5555543 5689999999987666321 0 0 1234
Q ss_pred EEecccch----HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 200 IASPACTE----LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 200 vv~~s~~s----~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
++....|. +.......+ .+ .. ...+|+++++++|.+ ++.+|+++..++.+|.+.|+++|+++|
T Consensus 96 I~~~~~yg~~~~~~~~~~~~~-~~---~~-~~~~d~~~l~~~i~~--------~TklV~lesP~NPtg~~~di~~I~~la 162 (364)
T PRK07269 96 VAVRDLYGGSFRWFNQQEKEG-RF---HF-TYANTEEELIAAIEE--------DTDIVYIETPTNPLMVEFDIEKVAKLA 162 (364)
T ss_pred EEecCCcCchHHHHHHHHhcC-cE---EE-EecCCHHHHHHhcCc--------CceEEEEECCCCCCCeeeCHHHHHHHH
Confidence 43322221 111110011 11 11 123588999999876 567898999999999999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
+++|++++||.||+......| .- ..+|.++.|+||+++++.+ .|++.+++.....+.... ..+
T Consensus 163 ~~~gi~vvvD~t~~~~~~~~p----l~---~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~-~~~------- 227 (364)
T PRK07269 163 HAKGAKVIVDNTFYSPIYQRP----IE---LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYN-LNT------- 227 (364)
T ss_pred HHcCCEEEEECCCcccccCCc----hh---hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHH-HHH-------
Confidence 999999999999875432222 11 1469999999999998876 676676665443322210 000
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-Eeccccccceeeecc
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE-VIYEVLMGLVCFRLK 426 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~-l~~~~~~~~v~f~~~ 426 (561)
.+.....+..|..++.+. .+..++++..+++.++.+.|++.|.+. ++.|+..++++|.+.
T Consensus 228 -----------~G~~~s~~~a~l~~~~L~--tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 228 -----------TGAVLSPFDSYLLMRGLK--TLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred -----------hCCCCCHHHHHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence 011234556666555544 488899999999999999999999875 455777889899664
No 184
>PLN02242 methionine gamma-lyase
Probab=99.56 E-value=9.1e-13 Score=139.07 Aligned_cols=222 Identities=13% Similarity=0.093 Sum_probs=143.9
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ ++++|.+ ..++++||++|+..++.+.... ++.+++.
T Consensus 74 ~~Pt~~~LE~~l----A~l~g~~-----------~~l~~~sG~~Ai~~al~al~~~-----------------GD~Vl~~ 121 (418)
T PLN02242 74 FNPTVLNLGRQM----AALEGTE-----------AAYCTASGMSAISSVLLQLCSS-----------------GGHVVAS 121 (418)
T ss_pred CChhHHHHHHHH----HHHhCCC-----------eEEEEccHHHHHHHHHHHHhCC-----------------CCEEEEc
Confidence 577777888755 7777775 3589999999998877654211 1233333
Q ss_pred cccchHH-HHH-----HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 203 PACTELE-VVM-----LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 203 ~s~~s~~-kaa-----~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
...|.-. ..+ +..|++++.++ ..|+++|+++|.+ . ++.+|+.+..++.+|.+.|+++|+++|+
T Consensus 122 ~~~Y~~~~~~~~~~~~~~~G~~~~~~d----~~d~e~l~~~i~~--~-----~tklV~lesp~NPtG~v~dl~~I~~la~ 190 (418)
T PLN02242 122 NTLYGGTHALLAHFLPRKCNITTTFVD----ITDLEAVKKAVVP--G-----KTKVLYFESISNPTLTVADIPELARIAH 190 (418)
T ss_pred CCcHHHHHHHHHHhhhhccCceEEEcC----CCCHHHHHHhcCc--C-----CCEEEEEecCCCCCCcccCHHHHHHHHH
Confidence 2223222 222 23566666565 3488999988865 1 3678888888999999999999999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCccccccccc--eeEEecChhhHHHhhccCCC-ccccCCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDC--SAMWLKDPSWVVNAFNVDPL-YLKHDQQG 353 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~--g~l~~r~~~~l~~~~~~~~~-yl~~~~~~ 353 (561)
+||++++||.+|+. ..+.+. . . .+|+++.+++|+++++... |++. .+...+......... +.
T Consensus 191 ~~gi~livDea~~~-~~~~~~--~----~-g~divv~S~SK~l~g~g~~~gG~iv-~~~~li~~l~~~~~~~~~------ 255 (418)
T PLN02242 191 EKGVTVVVDNTFAP-MVLSPA--R----L-GADVVVHSISKFISGGADIIAGAVC-GPAELVNSMMDLHHGALM------ 255 (418)
T ss_pred HhCCEEEEECCCCc-cCCCHH--H----c-CCcEEEEeCccccCCCCCceEEEEE-cCHHHHHHHHHHhhhhhh------
Confidence 99999999999963 333221 1 1 2599999999999887653 5444 454444332211110 00
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
. .+-...+...|..++ +...+..++++..+++.++.+.|+++ ++++..|
T Consensus 256 ---------~-~g~~~~~~~A~l~~~--~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~yP 304 (418)
T PLN02242 256 ---------L-LGPTMNPKVAFELSE--RLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIYP 304 (418)
T ss_pred ---------c-cCCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEECC
Confidence 0 011223344454444 44456778889999999999999998 5676643
No 185
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.56 E-value=3.4e-12 Score=135.80 Aligned_cols=252 Identities=9% Similarity=0.004 Sum_probs=153.1
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++.+.+.+++.+..|.+-+ ....++|+|+|+|+..++.+..+ + ++++
T Consensus 89 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~-------~~~v~it~G~~~al~l~~~~l~~----------~-------Gd~V 144 (430)
T PLN00145 89 SYSTCVGLLPARRAIAEYLSRDLPYELS-------TDDIYLTAGCAQAIEIIMSVLAQ----------P-------GANI 144 (430)
T ss_pred CCCCCccCHHHHHHHHHHHhhccCCCCC-------hhhEEEeCCHHHHHHHHHHHhcC----------C-------CCEE
Confidence 3444455678888888888776665421 13689999999998766654211 0 2244
Q ss_pred EEecccch-HHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHH
Q psy9807 200 IASPACTE-LEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIG 272 (561)
Q Consensus 200 vv~~s~~s-~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~ 272 (561)
++....|+ ....+...|.+++.++. +++.+|+++|++.+.+ .+.+++++..++.||.+-| +++|+
T Consensus 145 lv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~i~i~~P~NPtG~v~~~~~l~~i~ 216 (430)
T PLN00145 145 LLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE--------NTVAMVIINPNNPCGSVYSYEHLAKIA 216 (430)
T ss_pred EEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc--------CceEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 44444444 45566778888888886 4578999999998866 4567777888899999987 88899
Q ss_pred HHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCccccccc-cceeEEecChh-hHHHh--hccCCCc
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPS-WVVNA--FNVDPLY 346 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~-~l~~~--~~~~~~y 346 (561)
++|++||+++++|.+|+....-....... +... .-=.+..++.|.++.|. =+|.+...++. .+... ...-..+
T Consensus 217 ~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~ 295 (430)
T PLN00145 217 ETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEV-APVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNY 295 (430)
T ss_pred HHHHHcCCEEEEeccchhhccCCCCccchhhhccc-CcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHH
Confidence 99999999999999997532211111111 1111 11256778999977763 46777664332 11110 0000001
Q ss_pred cccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Q psy9807 347 LKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL---GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 420 (561)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~ 420 (561)
.... . ....+..++....+ ....++++++...+..+.+.+.|++++++.+...|+.+.
T Consensus 296 ~~~~--------------~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~ 356 (430)
T PLN00145 296 LNIS--------------T--DPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSM 356 (430)
T ss_pred hccc--------------C--CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeee
Confidence 0000 0 00111112222222 234567778888888889999999888887654444433
No 186
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.56 E-value=1.5e-12 Score=136.07 Aligned_cols=287 Identities=11% Similarity=0.001 Sum_probs=173.5
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccch-HHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACTE-LEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~s-~~ka 211 (561)
++.+.+++++|.+++ ..++|+|++++....+.+. .. . ++.+++....|. ....
T Consensus 71 ~lr~~ia~~~~~~~~---------~i~~t~G~~~~l~~~~~~l----~~----~---------gd~vl~~~p~y~~~~~~ 124 (367)
T PRK02731 71 ELKAALAEKFGVDPE---------RIILGNGSDEILELLARAY----LG----P---------GDEVIYSEHGFAVYPIA 124 (367)
T ss_pred HHHHHHHHHhCcCHH---------HEEEcCCHHHHHHHHHHHh----cC----C---------CCEEEEecCCHHHHHHH
Confidence 344556667787654 4678888777643332221 10 0 123444433333 3334
Q ss_pred HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc--CceEEechhcc
Q psy9807 212 MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK--DVWLHVDAAYA 289 (561)
Q Consensus 212 a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~--~~~lhVDaA~g 289 (561)
+...|.+++.+|.+++.+|++.|++.+.+ .+.+|+.+..++.||.+-|+++|.++++.+ |+|+++|.+|.
T Consensus 125 ~~~~g~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~ 196 (367)
T PRK02731 125 AQAVGAKPVEVPAKDYGHDLDAMLAAVTP--------RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYA 196 (367)
T ss_pred HHHcCCeEEEecccCCCCCHHHHHHHhCC--------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHH
Confidence 56788899999886688999999998865 466777888899999999999999999875 99999999987
Q ss_pred cccccCcccc--ccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 290 GSAFICPENR--YLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 290 g~~~~~~~~~--~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
......+... .....- .-..+..++.|.++.| ..+|.++.+ ...+.........| .
T Consensus 197 ~~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~g~~G~RiG~l~~~-~~~~~~l~~~~~~~---------------~---- 255 (367)
T PRK02731 197 EYVRRKDYEDGLELVAKF-PNVVVTRTFSKAYGLAGLRVGYGIAP-PEIIDALNRVRQPF---------------N---- 255 (367)
T ss_pred HhccCcCcccHHHHHhhc-CCEEEEeeehHhhcCcccceeeeeCC-HHHHHHHHHccCCC---------------C----
Confidence 5332111010 001100 1135566889988654 456887764 33332211111111 0
Q ss_pred CCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHH
Q psy9807 367 RRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVL 445 (561)
Q Consensus 367 r~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~ 445 (561)
...+..+++.+.+. ...+++..++..++.+++.+.|++. ++.+. ++..+.+.+++.
T Consensus 256 --~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~------------------- 312 (367)
T PRK02731 256 --VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFD------------------- 312 (367)
T ss_pred --CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECC-------------------
Confidence 12334445555554 3345667777778888888988887 66654 334444444321
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEE
Q psy9807 446 RLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFL 525 (561)
Q Consensus 446 ~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~l 525 (561)
+ .....++.+.|.+.|..+..........++
T Consensus 313 ------------------------------------------------~-~~~~~~~~~~L~~~gI~v~~~~~~~~~~~i 343 (367)
T PRK02731 313 ------------------------------------------------D-GKDAAEAYQALLKRGVIVRPVAGYGLPNAL 343 (367)
T ss_pred ------------------------------------------------C-CCCHHHHHHHHHHCCEEEEeCCCCCCCCeE
Confidence 1 111357788888877544333222224589
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 526 RMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 526 R~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
|++++ +.+++++++++|+++.
T Consensus 344 Ris~~----~~~e~~~l~~aL~~~~ 364 (367)
T PRK02731 344 RITIG----TEEENRRFLAALKEFL 364 (367)
T ss_pred EEecC----CHHHHHHHHHHHHHHH
Confidence 99964 4678999999998764
No 187
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.56 E-value=3.9e-12 Score=134.52 Aligned_cols=296 Identities=13% Similarity=0.033 Sum_probs=168.6
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
.+...++|+ .+++++|.+ ..+|++|||+||..|+.++|...... .+ ... ...+++++.
T Consensus 82 ~~~~~~l~~----~l~~~~~~~-----------~~~~~~SGs~A~e~al~~a~~~~~~~---~g--~~~--~~~~vi~~~ 139 (401)
T PRK00854 82 NDQLAPLYE----ELAALTGSH-----------KVLPMNSGAEAVETAIKAVRKWGYEV---KG--VPE--GQAEIIVCA 139 (401)
T ss_pred CHHHHHHHH----HHHhhCCCC-----------EEEEeCCcHHHHHHHHHHHHHHHHhc---cC--CCC--CCceEEEEC
Confidence 344445555 456666653 46999999999999999998652111 00 000 012344444
Q ss_pred cc--chHHHHHHhcc------------CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC--
Q psy9807 204 AC--TELEVVMLDWL------------GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC-- 267 (561)
Q Consensus 204 s~--~s~~kaa~~~g------------~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp-- 267 (561)
.. .+..-+..+.+ ..+..+| ..|+++|++.|.+ ++.+|+.....+.+|.+-|
T Consensus 140 ~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~le~~i~~--------~~~aii~e~~~~~~G~~~~~~ 207 (401)
T PRK00854 140 DNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP----FGDAEALEAAITP--------NTVAFLVEPIQGEAGVIIPPA 207 (401)
T ss_pred CCcCCccHHHHhccCCccccccCCCCCCCeEEeC----CCCHHHHHHHhCC--------CeEEEEEccccCCCCCcCCCH
Confidence 43 22111111111 1344444 5689999998865 5678899999999999887
Q ss_pred --HHHHHHHHhhcCceEEechhcccccccCcc-ccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccC
Q psy9807 268 --LEEIGQVCRQKDVWLHVDAAYAGSAFICPE-NRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVD 343 (561)
Q Consensus 268 --l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~-~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~ 343 (561)
+++|+++|++||+++++|.+|.|... .+. +.....++ .+|.++++ |++..-+ ..|++..++. .+. .+..
T Consensus 208 ~~l~~l~~l~~~~gi~lI~DEv~~g~g~-~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~~-~l~~- 280 (401)
T PRK00854 208 GYFTRVRELCTANNVTLILDEIQTGLGR-TGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSAVLSNSE-VLG-VLKP- 280 (401)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhCCCC-CchHhHHhhcCC-CCCEEEec--ccccCCccCeEEEEEcHH-HHh-cccC-
Confidence 99999999999999999999975322 211 11111222 35777764 9997653 4566666442 222 1210
Q ss_pred CCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc--ccccce
Q psy9807 344 PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE--VLMGLV 421 (561)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~--~~~~~v 421 (561)
+ .. .. +. + ...+..++++..+....-..+.++..++.+++.+.|++. ++..+.. ....++
T Consensus 281 --~-~~---~~-------t~-~---~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~g~g~~~ 342 (401)
T PRK00854 281 --G-QH---GS-------TF-G---GNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSI-RSNIVREVRGRGLML 342 (401)
T ss_pred --C-CC---CC-------CC-C---cCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhh-ccCceEEEeccceEE
Confidence 0 00 00 00 1 123333334433322111335677888889999999876 2222211 111221
Q ss_pred eeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHH
Q psy9807 422 CFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEK 501 (561)
Q Consensus 422 ~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~ 501 (561)
.| ...+......+
T Consensus 343 ~i-------------------------------------------------------------------~~~~~~~~~~~ 355 (401)
T PRK00854 343 AV-------------------------------------------------------------------ELEPEAGGARQ 355 (401)
T ss_pred EE-------------------------------------------------------------------EEecCchhHHH
Confidence 21 11111122457
Q ss_pred HHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 502 LLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 502 l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+.+.|.+.|... .+ .+..++|++.. ..++++||+++++.|+++.
T Consensus 356 ~~~~L~~~GV~v-~~---~~~~~lR~~p~-~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 356 YCEALKERGLLA-KD---THDHTIRLAPP-LVITREQVDWALEQIAKVL 399 (401)
T ss_pred HHHHHHHCCeEE-ec---CCCCEEEEeCC-cccCHHHHHHHHHHHHHHh
Confidence 888888887543 32 23458999854 4568889999999998764
No 188
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.56 E-value=3.7e-12 Score=132.25 Aligned_cols=283 Identities=13% Similarity=0.037 Sum_probs=174.6
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccchHHH-H
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACTELEV-V 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~s~~k-a 211 (561)
++++.+++.++.+++ ..++|+|++++...++.+..+. ++.+++....|+... .
T Consensus 64 ~lr~aia~~~~~~~~---------~I~it~G~~~al~~~~~~l~~~-----------------gd~vlv~~P~y~~~~~~ 117 (353)
T PRK05387 64 ALRQAIAAYYGLDPE---------QVFVGNGSDEVLAHAFLAFFNH-----------------DRPLLFPDITYSFYPVY 117 (353)
T ss_pred HHHHHHHHHhCCCHH---------HEEEcCCHHHHHHHHHHHhcCC-----------------CCEEEEeCCCHHHHHHH
Confidence 566677777787764 6899999999876665543211 224444444454444 4
Q ss_pred HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc-CceEEechhcc
Q psy9807 212 MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK-DVWLHVDAAYA 289 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~-~~~lhVDaA~g 289 (561)
+...|.+++.+|. +++.+|+++|++ . ..+|+.+...+.||.+-|.+++.++++.+ ++++++|.+|+
T Consensus 118 ~~~~g~~~~~v~~~~~~~~d~~~l~~---~---------~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~ 185 (353)
T PRK05387 118 AGLYGIPYEEIPLDDDFSIDVEDYLR---P---------NGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYV 185 (353)
T ss_pred HHHcCCEEEEeecCCCCCCCHHHHHh---c---------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCccc
Confidence 5778899999998 778899998863 2 12467777899999999999999999876 99999999985
Q ss_pred cccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC
Q psy9807 290 GSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR 368 (561)
Q Consensus 290 g~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~ 368 (561)
... ........... .-..+..+++|.++.|. -+|.++. +...+.........+ . .+ .
T Consensus 186 ~~~--~~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~~~~l~~~~~~~-~-----------~~------~ 243 (353)
T PRK05387 186 DFG--GESAIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIG-HPELIEALNRVKNSF-N-----------SY------P 243 (353)
T ss_pred ccC--CcchHHHHhhC-CCEEEEEehhHhhcchhhhceeeec-CHHHHHHHHHhhccC-C-----------CC------C
Confidence 321 11111111111 12578889999987553 4666664 444333221111100 0 00 0
Q ss_pred cchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHH
Q psy9807 369 FRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRL 447 (561)
Q Consensus 369 ~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~ 447 (561)
...+..+++...+. .+.+++..++..+..+++.+.|++. ++++. ++..+.+.++.
T Consensus 244 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~---------------------- 299 (353)
T PRK05387 244 LDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARH---------------------- 299 (353)
T ss_pred cCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEEC----------------------
Confidence 11222333333332 3446677778888888999999887 77654 33334333221
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEE
Q psy9807 448 LGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRM 527 (561)
Q Consensus 448 ~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~ 527 (561)
.+.+ ..++.+.|.+.|..+..........++|+
T Consensus 300 ---------------------------------------------~~~~--~~~~~~~l~~~gi~v~~~~~~~~~~~iRi 332 (353)
T PRK05387 300 ---------------------------------------------PSHD--AAELAAKLRERGIIVRHFNKPRIDQFLRI 332 (353)
T ss_pred ---------------------------------------------CCCC--HHHHHHHHHHCCEEEEECCCCCCCCeEEE
Confidence 1111 34677888888755432222223568999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHH
Q psy9807 528 AVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 528 ~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+++ +++++++++++|+++.
T Consensus 333 s~~----~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 333 TIG----TDEEMEALVDALKEIL 351 (353)
T ss_pred EeC----CHHHHHHHHHHHHHHh
Confidence 975 4579999999998764
No 189
>PRK07337 aminotransferase; Validated
Probab=99.55 E-value=4.6e-12 Score=133.35 Aligned_cols=190 Identities=12% Similarity=0.052 Sum_probs=124.2
Q ss_pred HHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q psy9807 107 ADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEA 186 (561)
Q Consensus 107 ~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~ 186 (561)
.+.+...+......|.......++.+.+.+|+.+.+|.+-+ ....++|+|++++...++.+..+
T Consensus 49 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~~t~G~~~al~~~~~~l~~--------- 112 (388)
T PRK07337 49 VEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVA-------PERIVVTAGASAALLLACLALVE--------- 112 (388)
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------hHhEEEecCcHHHHHHHHHHhcC---------
Confidence 44445444433334544445678999999999988776321 12578999999986555443210
Q ss_pred CCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC
Q psy9807 187 HPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC 262 (561)
Q Consensus 187 ~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t 262 (561)
+ ++.+++.... ......+...|.+++.+|. . ++.+|+++|++.+.+ .+.+|+.+..++.|
T Consensus 113 -~-------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~l~~p~NPt 176 (388)
T PRK07337 113 -R-------GDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE--------RTRGVLLASPSNPT 176 (388)
T ss_pred -C-------CCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc--------cceEEEEECCCCCC
Confidence 0 2345555555 4455566677888998988 3 468999999998865 45567777788899
Q ss_pred ccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCcccccee-eecCCcccccccc-ceeEEec
Q psy9807 263 CAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSF-NFNPHKWMLVTFD-CSAMWLK 331 (561)
Q Consensus 263 G~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi-~~~~HK~l~~P~g-~g~l~~r 331 (561)
|.+-+ +++|+++|++||+|+++|.+|.... +.+...... .. ..+.+ ..+++|.++.|.- +|.++..
T Consensus 177 G~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~-~~~~~~~~~-~~-~~~vi~~~S~SK~~~~~G~RiG~~~~~ 247 (388)
T PRK07337 177 GTSIAPDELRRIVEAVRARGGFTIVDEIYQGLS-YDAAPVSAL-SL-GDDVITINSFSKYFNMTGWRLGWLVVP 247 (388)
T ss_pred CcCcCHHHHHHHHHHHHHCCCEEEEeccccccc-cCCCCcChh-hc-cCCEEEEEechhhcCCchhheeeeecC
Confidence 99765 7888899999999999999987532 211111111 11 12444 5589999976543 6777664
No 190
>PRK07550 hypothetical protein; Provisional
Probab=99.55 E-value=5.6e-12 Score=132.58 Aligned_cols=241 Identities=11% Similarity=0.009 Sum_probs=141.3
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|...+...++.+.+.+++.+..|.+-. ....++|+|+++++..++.+... + ++++
T Consensus 62 ~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~~----------~-------gd~V 117 (386)
T PRK07550 62 LYGPVEGLPELREAYAAHYSRLYGAAIS-------PEQVHITSGCNQAFWAAMVTLAG----------A-------GDEV 117 (386)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCC-------cceEEEecCcHHHHHHHHHHhcC----------C-------CCEE
Confidence 3434445678999999999988775422 12578888888887655544211 0 2344
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIG 272 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~ 272 (561)
++.... ......++..|.+++.++. . .+.+|++.|++.+++ .+.+|+.+..++.||.+-| +++|+
T Consensus 118 lv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~--------~~~~v~~~~P~NPtG~~~~~~~~~~i~ 189 (386)
T PRK07550 118 ILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP--------RTRAIALVTPNNPTGVVYPPELLHELY 189 (386)
T ss_pred EEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc--------cCcEEEEeCCCCCCCcccCHHHHHHHH
Confidence 444444 3344455778999999998 3 345799999998866 4555666666778898765 88999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCc--cccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCcccc
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV--ELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi--~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
++|++||+++++|.+|+....-........... ..-..+..+++|.++.|. .+|++... ...+..... ++..
T Consensus 190 ~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~-~~~~~~~~~----~~~~ 264 (386)
T PRK07550 190 DLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVAS-PARIAEIEK----FMDT 264 (386)
T ss_pred HHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecC-HHHHHHHHH----HHhh
Confidence 999999999999999975321100000111111 011345789999997553 46666663 333322211 1100
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG--VKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.. .. ...+..+++...+. .+..++..++..+..+++.+.|.+.+++.+
T Consensus 265 ~~-----------~~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 314 (386)
T PRK07550 265 VA-----------IC----APRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWEL 314 (386)
T ss_pred cc-----------cC----CCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcee
Confidence 00 00 01112222222221 233444555666777788888887656644
No 191
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.55 E-value=4.4e-12 Score=131.60 Aligned_cols=243 Identities=12% Similarity=-0.012 Sum_probs=144.5
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCC-CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~-~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
.|.......++.+.+.+|+.+..|.+-+ .. ..++|+|++++...++.+..+. + ..++.
T Consensus 31 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~-------~~~~Iiit~Gs~~ai~~~~~~~~~~--------g------~~~d~ 89 (350)
T TIGR03537 31 QYPSALGTKALREAISGWFERRFGVKLD-------PDAQVLPSAGSKEAIFHFPLVFIDP--------E------EDRRR 89 (350)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCCcEEEcCChHHHHHHHHHHHcCC--------C------CCCce
Confidence 3443334568999999999988886532 12 5788999888876554432110 0 00123
Q ss_pred eEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHH
Q psy9807 199 LIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEI 271 (561)
Q Consensus 199 ~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI 271 (561)
+++.... .....++...|.+++.+|. . +..+|++++++++.+ .+.+++++..++.||.+-| +++|
T Consensus 90 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~--------~~~~i~i~~p~NPtG~~~~~~~~~~l 161 (350)
T TIGR03537 90 VIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE--------ETKIVWINYPHNPTGATAPRSYLKET 161 (350)
T ss_pred EEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh--------ccEEEEEeCCCCCcCcccCHHHHHHH
Confidence 4444444 5566667889999999988 3 345899999998866 4567777778899998887 8999
Q ss_pred HHHHhhcCceEEechhcccccccCccccccccCccc-cceeeecCCcccccccc-ceeEEecChhhHHHhhccCCCcccc
Q psy9807 272 GQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVEL-ADSFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 272 ~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~-aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
+++|++||+++++|.+|+-... ...... ...... -..+..+++|.++.|.- .|.+. .++............|- .
T Consensus 162 ~~~a~~~~~~ii~De~y~~~~~-~~~~~~-~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~-~~~~~~~~~~~~~~~~~-~ 237 (350)
T TIGR03537 162 IAMCREHGIILCSDECYTEIYF-GEPPHS-ALEVGIENVLAFHSLSKRSGMTGYRSGFVA-GDEKLISFLRKLRANFG-V 237 (350)
T ss_pred HHHHHHcCcEEEEecccccccc-CCCCCc-hhhcCcCCEEEEeecccccCCccccceeee-cCHHHHHHHHHHHHhhc-c
Confidence 9999999999999999974322 111111 111111 12556689999876632 45444 44433332221111110 0
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL-GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
+. ..+...++...+ ....+++..++..+..+.+.+.|++. ++++..
T Consensus 238 ----------------~~--~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~ 284 (350)
T TIGR03537 238 ----------------AS--PDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYLY 284 (350)
T ss_pred ----------------CC--CHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 00 000001111111 12344556666777777888888876 666553
No 192
>PRK04311 selenocysteine synthase; Provisional
Probab=99.54 E-value=5.6e-12 Score=133.92 Aligned_cols=161 Identities=12% Similarity=0.041 Sum_probs=107.2
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-------
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC------- 205 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~------- 205 (561)
.+.+.+++++|.+ ..+++++|+.|+..++.+. . . ++++++...+
T Consensus 131 ~~e~~lA~l~Gae-----------~a~vv~sgtaAl~l~l~~l-----~----~---------GdeVIvs~~e~~~~ggs 181 (464)
T PRK04311 131 ALAALLCALTGAE-----------DALVVNNNAAAVLLALNAL-----A----A---------GKEVIVSRGELVEIGGA 181 (464)
T ss_pred HHHHHHHHHhCCC-----------eEEEECCHHHHHHHHHHHh-----C----C---------CCEEEEcchhhhhcCcc
Confidence 5666779998875 3588899998887766431 0 0 2345554433
Q ss_pred chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCC--Cc--cccCHHHHHHHHhhcCce
Q psy9807 206 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN--CC--AFDCLEEIGQVCRQKDVW 281 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~--tG--~idpl~eI~~ia~~~~~~ 281 (561)
+++...+...|++++.+++. ...++++++++|.+ ++.+|+.++.++. +| ...|+++|+++||+||++
T Consensus 182 ~~i~~~~~~~G~~l~~v~~~-~~t~~~dle~aI~~--------~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~ 252 (464)
T PRK04311 182 FRIPDVMRQAGARLVEVGTT-NRTHLRDYEQAINE--------NTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLP 252 (464)
T ss_pred hhhHHHHHHCCcEEEEECCC-CCCCHHHHHHhcCc--------cCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCe
Confidence 23444556678888888762 24578999999976 4566666666553 45 567999999999999999
Q ss_pred EEechhcccccc---c-CccccccccCc-cccceeeecCCccccccccceeEEecC
Q psy9807 282 LHVDAAYAGSAF---I-CPENRYLMKGV-ELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 282 lhVDaA~gg~~~---~-~~~~~~~~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
++||++.|...- + .+......+-+ ..+|.+++++|||+++|. +|+++.++
T Consensus 253 vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~-~G~i~g~~ 307 (464)
T PRK04311 253 VVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ-AGIIVGKK 307 (464)
T ss_pred EEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCc-eEEEEEcH
Confidence 999997543210 0 00111111111 246999999999999995 88888764
No 193
>PRK08960 hypothetical protein; Provisional
Probab=99.54 E-value=4.4e-12 Score=133.47 Aligned_cols=192 Identities=11% Similarity=0.010 Sum_probs=123.8
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+...+......|...+...++.+.+.+|+.+..|.+-+ ....++|+|++++...++.+.. .
T Consensus 50 v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~it~G~~~al~~~~~~~~----~---- 114 (387)
T PRK08960 50 IVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVD-------PERILVTPGGSGALLLASSLLV----D---- 114 (387)
T ss_pred HHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCC-------hhhEEEccCcHHHHHHHHHHhc----C----
Confidence 334444444333334555556678888899999887775422 1367899999998766554321 0
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
+ ++.+++.... .+....+...|.+++.+|+ . ++.+|++.|++.+.+ .+.+++.+..++.
T Consensus 115 --~-------gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~--------~~~~i~i~~p~NP 177 (387)
T PRK08960 115 --P-------GKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA--------DTVGALVASPANP 177 (387)
T ss_pred --C-------CCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc--------cceEEEEECCCCC
Confidence 0 2345555544 4556666777888888988 3 357999999998866 3456667778899
Q ss_pred CccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEec
Q psy9807 262 CCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLK 331 (561)
Q Consensus 262 tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r 331 (561)
||.+-+ +++|+++|++||+++++|.+|.... +.+...... .+..--.+..+++|.++.|. =+|.+...
T Consensus 178 tG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~-~~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~~~~ 249 (387)
T PRK08960 178 TGTLLSRDELAALSQALRARGGHLVVDEIYHGLT-YGVDAASVL-EVDDDAFVLNSFSKYFGMTGWRLGWLVAP 249 (387)
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccc-cCCCCCChh-hccCCEEEEeecccccCCcccEEEEEEcC
Confidence 999876 5566777999999999999997532 221111111 12111256789999887553 27777664
No 194
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.54 E-value=1.3e-12 Score=134.47 Aligned_cols=278 Identities=10% Similarity=0.034 Sum_probs=158.4
Q ss_pred ccccCCCCCChHHHHHHHHHhhc-ccccc------ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCCh
Q psy9807 92 FHAYFPTANSYPAIVADILSDSI-ACIGF------TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTA 164 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~~------~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~gg 164 (561)
.+..+++.+.....+...+.+.+ |.... .|.......++|+-+++.++++||+++..++ .-+=.-||
T Consensus 22 ~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~------anvqp~SG 95 (399)
T PF00464_consen 22 TLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWY------ANVQPHSG 95 (399)
T ss_dssp SEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEE------EE---SSH
T ss_pred CccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccce------EEeecCCc
Confidence 34455554444444445555544 32222 2344567789999999999999999854221 22456889
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc----chHHHHHH-------hccCCeEEeeC--CCCccCh
Q psy9807 165 SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC----TELEVVML-------DWLGKMLDLPK--EFLACSG 231 (561)
Q Consensus 165 T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~----~s~~kaa~-------~~g~~v~~v~~--~~g~~d~ 231 (561)
|.||+.++.+..+. ++++....-. .|...... -...++...++ +.+.+|.
T Consensus 96 s~An~av~~aLl~p-----------------GD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~ 158 (399)
T PF00464_consen 96 SQANLAVYMALLKP-----------------GDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDY 158 (399)
T ss_dssp HHHHHHHHHHHT-T-----------------T-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-H
T ss_pred hHHHHHHHHHHHhh-----------------cCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECH
Confidence 99998777664321 2234333222 22111111 11235666666 6899999
Q ss_pred hhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCcccccee
Q psy9807 232 GKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSF 311 (561)
Q Consensus 232 ~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi 311 (561)
+++++.+++ . +|.+|++- .+..--.-|++++.+||++.|++|++|+||-++.+....+..-+ +.||++
T Consensus 159 d~l~~~a~~--~-----kPklIi~G--~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~---~~ADvv 226 (399)
T PF00464_consen 159 DELEKLAKE--H-----KPKLIICG--ASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF---PYADVV 226 (399)
T ss_dssp HHHHHHHHH--H-------SEEEEE---SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC---CTSSEE
T ss_pred HHHHHHHhh--c-----CCCEEEEC--chhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcc---ccceEE
Confidence 999999987 3 68877773 33343557899999999999999999999987776554444333 457999
Q ss_pred eecCCccccccccceeEEecC------------hhhHHHhhcc--CCCccccCCCCCCCCCCcccccCcCCc-chHHHHH
Q psy9807 312 NFNPHKWMLVTFDCSAMWLKD------------PSWVVNAFNV--DPLYLKHDQQGSAPDYRHWQIPLGRRF-RSLKLWF 376 (561)
Q Consensus 312 ~~~~HK~l~~P~g~g~l~~r~------------~~~l~~~~~~--~~~yl~~~~~~~~~~~~~~~~~~sr~~-~al~lw~ 376 (561)
+.+.||.|.+|.| |+++++. ...+.+.+.. -|.. +.+-.. ...++..
T Consensus 227 t~sThKtl~GPrg-giI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~-----------------qg~~h~~~iaalAv 288 (399)
T PF00464_consen 227 TGSTHKTLRGPRG-GIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGL-----------------QGGPHMHRIAALAV 288 (399)
T ss_dssp EEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT------------------SS--HHHHHHHHH
T ss_pred EeeccccccccCc-eEEEEcCCccccCCcccccHHHHHHHhccccCCCc-----------------ccCcchhHHHHHHH
Confidence 9999999999985 7777761 1122222210 0111 111111 2334445
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-ccccceee
Q psy9807 377 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCF 423 (561)
Q Consensus 377 ~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~~~v~f 423 (561)
+++......+++..++..++|+.|.+.|.+. |++++.. .+.-+|..
T Consensus 289 al~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlv 335 (399)
T PF00464_consen 289 ALKEALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLV 335 (399)
T ss_dssp HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEE
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEE
Confidence 5666555567889999999999999999998 9999853 34444443
No 195
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.54 E-value=6.5e-12 Score=132.67 Aligned_cols=323 Identities=8% Similarity=-0.031 Sum_probs=186.4
Q ss_pred HHHHHHHHhhccc-cccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q psy9807 104 AIVADILSDSIAC-IGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQR 182 (561)
Q Consensus 104 ~~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~ 182 (561)
..+.+.+...++. ....|. .+...++-+.+.+|+.+..|.+-+ .....++|+|++++...++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~------~~~~I~it~G~~~al~~~~~~~~~----- 115 (399)
T PRK07681 48 DFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILN------ADKEVLLLMGSQDGLVHLPMVYAN----- 115 (399)
T ss_pred HHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCC------CCCeEEECCCcHHHHHHHHHHhCC-----
Confidence 3345555555443 222232 245567888899999887776422 002577888888886554433211
Q ss_pred HHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CC--CccChhhHHHHHhhhchhhcCCceEEEEEecC
Q psy9807 183 VKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EF--LACSGGKGGGVIQRKSDREMCSDLLQVVATLG 258 (561)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~--g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g 258 (561)
+ ++.+++.... ......+...|.+++.+|. ++ +.+|+++|++++.+ .+.+|+.+..
T Consensus 116 -----~-------Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~--------~~k~v~l~~P 175 (399)
T PRK07681 116 -----P-------GDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIAD--------KAKMMILNFP 175 (399)
T ss_pred -----C-------CCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccc--------cceEEEEeCC
Confidence 0 2244444444 4445556788999999998 33 46799999888755 4567777777
Q ss_pred CCCCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccc--cCccccceeeecCCccccccc-cceeEEecC
Q psy9807 259 TTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLM--KGVELADSFNFNPHKWMLVTF-DCSAMWLKD 332 (561)
Q Consensus 259 tt~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~--~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~ 332 (561)
.+.||.+-+ +++|+++|++||+|+++|.+|+....-........ .+...-..+..+++|.++.|. =+|.++. +
T Consensus 176 ~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~-~ 254 (399)
T PRK07681 176 GNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG-N 254 (399)
T ss_pred CCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEec-C
Confidence 889999977 78888999999999999999985322111111111 111111356679999887553 3676654 4
Q ss_pred hhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 333 PSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
+..+.. +.....+... ....+.-+++...+ +...+++..+...+..+++.+.|++. ++
T Consensus 255 ~~l~~~-~~~~~~~~~~------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 314 (399)
T PRK07681 255 EEIVRA-LTQFKSNTDY------------------GVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GW 314 (399)
T ss_pred HHHHHH-HHHHHhhccc------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 444332 2211110000 00111122222222 23445555666677778888888887 77
Q ss_pred EEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 411 EVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 411 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
++..+.....+..++.
T Consensus 315 ~~~~p~~g~f~~~~l~---------------------------------------------------------------- 330 (399)
T PRK07681 315 NVDKPAGSMFVWAEIP---------------------------------------------------------------- 330 (399)
T ss_pred cccCCCeeeEEEEECC----------------------------------------------------------------
Confidence 6544433333222221
Q ss_pred ecCCCcHHHHHHHHHHHh-CCcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRING-NGKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+ .....++.+.+.+ .|..+..+... .+..++|++++. ++++++++++.|++.+
T Consensus 331 ---~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~---~~~~~~~~l~~l~~~~ 386 (399)
T PRK07681 331 ---K-GWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ---DEEVLQQAVENIRNSG 386 (399)
T ss_pred ---C-CCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC---CHHHHHHHHHHHHHhc
Confidence 1 1113467777777 56544433222 234689999873 4689999999998754
No 196
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.54 E-value=2.4e-12 Score=126.78 Aligned_cols=236 Identities=14% Similarity=0.080 Sum_probs=156.6
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q psy9807 118 GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 197 (561)
Q Consensus 118 ~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~ 197 (561)
.++...-|....+|+++ +.+=|- ..++-++||..|..+|+...... +
T Consensus 55 iYsRi~NPT~~vlE~Ri----AaLEGG-----------~aa~a~aSG~AA~~~ai~~la~a-----------------G- 101 (426)
T COG2873 55 IYTRIMNPTTDVLEERI----AALEGG-----------VAALAVASGQAAITYAILNLAGA-----------------G- 101 (426)
T ss_pred eeeeccCchHHHHHHHH----HHhhcc-----------hhhhhhccchHHHHHHHHHhccC-----------------C-
Confidence 34455778888899876 443111 24577888888887777653211 1
Q ss_pred ceEEeccc-----chHHHH-HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHH
Q psy9807 198 NLIASPAC-----TELEVV-MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEI 271 (561)
Q Consensus 198 ~~vv~~s~-----~s~~ka-a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI 271 (561)
+-+|..+. +.+..- ....|++++.|. .-|++.++++|++ ++++|.+..-.+..+.+-|+++|
T Consensus 102 D~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd----~~d~~~~~~aI~~--------nTkavf~EtigNP~~~v~Die~i 169 (426)
T COG2873 102 DNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD----PDDPENFEAAIDE--------NTKAVFAETIGNPGLDVLDIEAI 169 (426)
T ss_pred CeeEeeccccCchHHHHHHHHHhcCcEEEEeC----CCCHHHHHHHhCc--------ccceEEEEeccCCCccccCHHHH
Confidence 23444443 555444 467899999999 6679999999998 67888888888888999999999
Q ss_pred HHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhc-cCCCcccc
Q psy9807 272 GQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFN-VDPLYLKH 349 (561)
Q Consensus 272 ~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~-~~~~yl~~ 349 (561)
+++||++|+.++||-+++...++-| .+ ..||.|+-|..||+++-. ..|.+++ |...+....+ .-|.|-.
T Consensus 170 a~iAh~~gvpliVDNT~atpyl~rP-~~------hGADIVvHS~TK~igGhGt~iGG~iV-D~G~FDw~~~~rfP~~~~- 240 (426)
T COG2873 170 AEIAHRHGVPLIVDNTFATPYLCRP-IE------HGADIVVHSATKYIGGHGTAIGGVIV-DGGKFDWTANGRFPEFTT- 240 (426)
T ss_pred HHHHHHcCCcEEEecCCCcceecch-hh------cCCCEEEEeecccccCCccccceEEE-eCCccccccCCCCcccCC-
Confidence 9999999999999999987644433 11 246999999999998653 3555555 3222221111 1111111
Q ss_pred CCCCCCCCCCcccccCcCC---------------------cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 350 DQQGSAPDYRHWQIPLGRR---------------------FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD 408 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~---------------------~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 408 (561)
++....++.+... ......|.. ..|.+.+.=++++++++|.++++.|+++|
T Consensus 241 ------p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~--lqGlETL~LRmerH~~NA~~vA~~L~~Hp 312 (426)
T COG2873 241 ------PDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLL--LQGLETLSLRMERHCENALKVAEFLENHP 312 (426)
T ss_pred ------CCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHH--HhchhhhHHHHHHHHHhHHHHHHHHhcCC
Confidence 1111122222221 112333432 34777788899999999999999999999
Q ss_pred CeEEecc
Q psy9807 409 RFEVIYE 415 (561)
Q Consensus 409 g~~l~~~ 415 (561)
.+.-++-
T Consensus 313 kV~~V~Y 319 (426)
T COG2873 313 KVAWVNY 319 (426)
T ss_pred Ceeeeec
Confidence 8776543
No 197
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.54 E-value=1.4e-11 Score=130.19 Aligned_cols=171 Identities=13% Similarity=0.008 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--ch
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TE 207 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s 207 (561)
....+.+.+++++|.+ ..+|++|||+||..|+..+|...... .+ +. ....++++.... .+
T Consensus 74 ~~~~~~~~l~~~~~~~-----------~~~~~~SGs~A~e~al~~~~~~~~~~---~~--~~--~~~~~vl~~~~~~Hg~ 135 (400)
T PTZ00125 74 VLGLAEKYITDLFGYD-----------KVLPMNSGAEAGETALKFARKWGYEV---KG--IP--ENQAKIIFCNGNFSGR 135 (400)
T ss_pred HHHHHHHHHHhCCCCC-----------EEEEeCCcHHHHHHHHHHHHHHHHhc---cC--CC--CCCCeEEEECCCcCCc
Confidence 4455555667777764 35899999999999999988642211 00 00 001234444433 22
Q ss_pred HHHHHHhccC------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHH
Q psy9807 208 LEVVMLDWLG------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEI 271 (561)
Q Consensus 208 ~~kaa~~~g~------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI 271 (561)
...++...+. .+..++ ..|+++|++.++. . .+.+|++....+.+|.+-| +++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~le~~l~~--~-----~~~~v~~ep~~~~~G~~~~~~~~l~~l 204 (400)
T PTZ00125 136 TIGACSASTDPKCYNNFGPFVPGFELVD----YNDVEALEKLLQD--P-----NVAAFIVEPIQGEAGVIVPDDGYLKQV 204 (400)
T ss_pred cHHHHhhcCCcchhccCCCCCCCceEeC----CCCHHHHHHHhCC--C-----CeEEEEEcCccCCCCCccCCHHHHHHH
Confidence 2223222221 112222 3589999998853 1 4667777777888999887 9999
Q ss_pred HHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecC
Q psy9807 272 GQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKD 332 (561)
Q Consensus 272 ~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~ 332 (561)
.++|++||+++++|.+|.+.......+.....++ ..|.+++ .|+++.++ ..|+++.++
T Consensus 205 ~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~--sK~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 205 YELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGV-KPDIVLL--GKALSGGLYPISAVLAND 263 (400)
T ss_pred HHHHHHcCCEEEEeccccCCCccchhhHHHhcCC-CCCEEEE--cccccCCCcCcEEEEEcH
Confidence 9999999999999999875321111011111222 3477776 49998775 788888755
No 198
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.54 E-value=1.4e-12 Score=135.78 Aligned_cols=216 Identities=15% Similarity=0.123 Sum_probs=135.9
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|...++|+.+ +++.+ + ..+++++|+.|+..++.+. +. + ++++++
T Consensus 48 y~~p~~~~Le~~l----A~l~~--~----------~~v~~~sG~~Ai~~~l~al----l~------~-------Gd~Vl~ 94 (366)
T PRK07582 48 ASNPTWRALEAAL----GELEG--A----------EALVFPSGMAAITAVLRAL----LR------P-------GDTVVV 94 (366)
T ss_pred CCCccHHHHHHHH----HHHcC--C----------CEEEECCHHHHHHHHHHHh----cC------C-------CCEEEE
Confidence 3566777888866 44442 1 4688899998876655442 10 0 234555
Q ss_pred ecccc-hHHHH----HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 202 SPACT-ELEVV----MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 202 ~~s~~-s~~ka----a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
....| ..... +...|++++.++. +.+ + .+.+ .+.+|++...++.+|.+.|+++|+++|
T Consensus 95 ~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~-------~-~~~~--------~t~lV~le~p~NPtg~v~di~~I~~~a 158 (366)
T PRK07582 95 PADGYYQVRALAREYLAPLGVTVREAPTAGMA-------E-AALA--------GADLVLAETPSNPGLDVCDLAALAAAA 158 (366)
T ss_pred eCCCcHhHHHHHHHHHhcCeEEEEEECCCChH-------H-Hhcc--------CceEEEEECCCCCCCCccCHHHHHHHH
Confidence 43332 33222 2345788888885 221 1 1212 345677777778889999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
+++|++++||++|+......| ++ -.+|.++.++|||+++|.+ .|+++.+++..... +.....+. +
T Consensus 159 ~~~g~~lvVD~t~~~~~~~~p-----~~--~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~-l~~~~~~~-----g 225 (366)
T PRK07582 159 HAAGALLVVDNTTATPLGQRP-----LE--LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAA-VERWRLLA-----G 225 (366)
T ss_pred HHcCCEEEEECCCCCccccCc-----hh--cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHH-HHHHHHHh-----C
Confidence 999999999999863221111 11 1359999999999998877 47676665543332 21111111 0
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
. ....+..|..++.+. .+..+++++.+++..+.+.|+++|.++-+.
T Consensus 226 ~-------------~~~~~~a~l~~r~l~--tl~~R~~~~~~na~~la~~L~~~p~v~~v~ 271 (366)
T PRK07582 226 A-------------IPGPFEAWLAHRSLG--TLGLRFARQCANALAVAELLAGHPAVRGVR 271 (366)
T ss_pred C-------------CCCHHHHHHHHhccc--cHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 0 112344565555544 467788999999999999999999876543
No 199
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.54 E-value=5.7e-12 Score=131.06 Aligned_cols=286 Identities=9% Similarity=-0.011 Sum_probs=172.2
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++++.+++.+|.+++ ..++|+|++++...++.+. . .+++++.... ..+..
T Consensus 58 ~~lr~~ia~~~~~~~~---------~i~it~Ga~~~l~~~~~~l-----~--------------~g~viv~~P~y~~~~~ 109 (356)
T PRK08056 58 RHLHQALARHHQVPAS---------WILAGNGETESIFAVVSGL-----K--------------PRRAMIVTPGFAEYRR 109 (356)
T ss_pred HHHHHHHHHHhCcChh---------hEEECCCHHHHHHHHHHHh-----C--------------CCCEEEeCCCcHHHHH
Confidence 5667777888888764 5788888888765444321 0 0134454444 44555
Q ss_pred HHHhccCCeEEeeC-CCCccChh-hHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEec
Q psy9807 211 VMLDWLGKMLDLPK-EFLACSGG-KGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~~g~~d~~-~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVD 285 (561)
.++..|.+++.+|. .+...+++ ++.+.+.+ .+.+|+.+...+.||.+-+ +++|+++|++||+++++|
T Consensus 110 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~--------~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~D 181 (356)
T PRK08056 110 ALQQVGCEIRRYSLREADGWQLTDAILEALTP--------DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILD 181 (356)
T ss_pred HHHHcCCeEEEEecccccCCCccHHHHHhccC--------CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEe
Confidence 67888999999998 33233333 44444433 4567778888999999988 888999999999999999
Q ss_pred hhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccccc
Q psy9807 286 AAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIP 364 (561)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (561)
.+|.....-....-..+... ..+.+..+++|+++.| .-+|.++..+...+.........|
T Consensus 182 e~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~~------------------ 242 (356)
T PRK08056 182 EAFIDFIPDETGFIPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPW------------------ 242 (356)
T ss_pred cchhccCCcchHHHHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC------------------
Confidence 99874321110000112222 2357889999999966 457777665544333221111111
Q ss_pred CcCCcchHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHH
Q psy9807 365 LGRRFRSLKLWFVLRLL-GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWF 443 (561)
Q Consensus 365 ~sr~~~al~lw~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~ 443 (561)
....+...++...+ +.....+..+...+..+++.+.|++++++.+. ++..+-+.++
T Consensus 243 ---~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~------------------- 299 (356)
T PRK08056 243 ---SINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLR------------------- 299 (356)
T ss_pred ---chhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEE-------------------
Confidence 01112222222233 23334555666778888899999888887765 3333332221
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECC--
Q psy9807 444 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRD-- 521 (561)
Q Consensus 444 ~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g-- 521 (561)
... + ..++.+.|.+.|.....+....+
T Consensus 300 ------------------------------------------------~~~-~--~~~~~~~l~~~gI~v~~~~~f~~~~ 328 (356)
T PRK08056 300 ------------------------------------------------CER-P--DIDLQRALLTQRILIRSCANYPGLD 328 (356)
T ss_pred ------------------------------------------------cCC-C--hHHHHHHHHHCCeEEEECCCCCCCC
Confidence 111 1 23677888888765544443322
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 522 VYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 522 ~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
..++|+++. +.++.++++++|+++.
T Consensus 329 ~~~iRis~~----~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 329 SRYYRVAIR----SAAENERLLAALRNVL 353 (356)
T ss_pred CCEEEEEEc----CHHHHHHHHHHHHHHH
Confidence 358999965 4568899999987653
No 200
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.53 E-value=1.1e-11 Score=130.68 Aligned_cols=247 Identities=11% Similarity=-0.018 Sum_probs=146.3
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++.+.+.+|+.+.+|.+-+. ....++|+|++++...++.+..+ + ++++
T Consensus 68 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~------~~~i~vt~G~~~al~~~~~~~~~----------~-------gd~V 124 (394)
T PRK05942 68 GYPPFEGTASFRQAITDWYHRRYGVELDP------DSEALPLLGSKEGLTHLALAYVN----------P-------GDVV 124 (394)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHCCCcCC------CCeEEEccChHHHHHHHHHHhCC----------C-------CCEE
Confidence 34333344689999999999887764210 01356788888887655443210 0 2345
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIG 272 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~ 272 (561)
++.... ......+...|.+++.+|. . ++.+|+++|++.+.+ ++.+|+.+..++.||.+-+ +++|+
T Consensus 125 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~--------~~k~i~l~~P~NPtG~~~s~~~~~~i~ 196 (394)
T PRK05942 125 LVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ--------QAKILYFNYPSNPTTATAPREFFEEIV 196 (394)
T ss_pred EEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc--------cceEEEEcCCCCCCCCcCCHHHHHHHH
Confidence 555444 3445556778889999988 2 347999999988865 5667777777899999987 88899
Q ss_pred HHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCcccc
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
++|++||+++++|.+|+-...-....... +.+.........++.|.++.| .-+|.++. ++..+.. +.....+..
T Consensus 197 ~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~-~~~l~~~-l~~~~~~~~- 273 (394)
T PRK05942 197 AFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG-NRHIIQG-LRTLKTNLD- 273 (394)
T ss_pred HHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeec-CHHHHHH-HHHHHhhcc-
Confidence 99999999999999987432211000011 111112235567888988644 44777765 4443332 221111100
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccccc
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 419 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~ 419 (561)
+. ...+...++...+ ....+++..++..+..+++.+.|++. ++.+.. +..+
T Consensus 274 --------~~---------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~-~~~~ 326 (394)
T PRK05942 274 --------YG---------IFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPP-TKAT 326 (394)
T ss_pred --------cC---------CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecC-CCee
Confidence 00 0011111111222 24456666677777788888888876 676543 3444
No 201
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=2.4e-12 Score=135.41 Aligned_cols=239 Identities=13% Similarity=0.098 Sum_probs=147.5
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ +++.|.. .++.++||+.|+..++.+... + ++.+++.
T Consensus 59 ~nPtv~~lE~~l----a~leg~~-----------~av~~~SG~aAi~~al~all~----------~-------GD~VI~~ 106 (432)
T PRK06702 59 GNPTLAAFEQKL----AELEGGV-----------GAVATASGQAAIMLAVLNICS----------S-------GDHLLCS 106 (432)
T ss_pred CCcHHHHHHHHH----HHHhCCC-----------cEEEECCHHHHHHHHHHHhcC----------C-------CCEEEEC
Confidence 468888888866 6666653 468999999999888875411 0 2234433
Q ss_pred cccc----hHH-HHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PACT----ELE-VVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~~----s~~-kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
...| .+. ......|+++..+. ..+|++.++++|.+ ++.+|++...++.++.+-|+++|+++|++
T Consensus 107 ~~~Y~~T~~~~~~~l~~~Gi~v~~vd---~~~d~~~l~~~I~~--------~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~ 175 (432)
T PRK06702 107 STVYGGTFNLFGVSLRKLGIDVTFFN---PNLTADEIVALAND--------KTKLVYAESLGNPAMNVLNFKEFSDAAKE 175 (432)
T ss_pred CCchHHHHHHHHHHHHHCCCEEEEEC---CCCCHHHHHHhCCc--------CCeEEEEEcCCCccccccCHHHHHHHHHH
Confidence 3222 222 22455678877775 34789999999977 56778888888889999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEe-cCh-hhHH----HhhccCCCcccc-
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWL-KDP-SWVV----NAFNVDPLYLKH- 349 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~-r~~-~~l~----~~~~~~~~yl~~- 349 (561)
||+++.+|.+|+...+.-| +.. .||.++-|..||+++..+ .|.+.+ ... .+.. ........|-..
T Consensus 176 ~gi~livD~T~~tP~~~~p----l~~---GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~ 248 (432)
T PRK06702 176 LEVPFIVDNTLATPYLCQA----FEH---GANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVS 248 (432)
T ss_pred cCCEEEEECCCCchhhCCh----hhc---CCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccc
Confidence 9999999999974332222 111 369999999999997643 333333 111 1000 000000000000
Q ss_pred -CCCCCCCC-----CCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 350 -DQQGSAPD-----YRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 350 -~~~~~~~~-----~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
....+... ........+-....+..|..++.+ +.+..+++++.+++.++.+.|+++|.++-+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL--~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V 316 (432)
T PRK06702 249 YVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGL--ETLHLRMERHSENALAVAKWLADHERIEWV 316 (432)
T ss_pred hhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence 00000000 000000111233456666655544 457889999999999999999999987644
No 202
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.53 E-value=9.4e-12 Score=131.82 Aligned_cols=163 Identities=12% Similarity=0.032 Sum_probs=107.5
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-----
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC----- 205 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~----- 205 (561)
...+.+.+++++|.+. .+++++|+.|+..++.+.. . ++++++...+
T Consensus 124 ~~~le~~lA~l~gae~-----------alvv~sg~aAi~l~l~~l~---------~---------GdeVIvs~~e~v~~g 174 (454)
T TIGR00474 124 YSHVEGLLCELTGAED-----------ALVVNNNAAAVLLALNTLA---------K---------GKEVIVSRGELVEIG 174 (454)
T ss_pred HHHHHHHHHHHhCCCc-----------EEEECCHHHHHHHHHHHhC---------C---------cCEEEECCChhhhhc
Confidence 3556667899999863 4778889988876663310 0 2244554332
Q ss_pred --chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCC--Cc--cccCHHHHHHHHhhcC
Q psy9807 206 --TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN--CC--AFDCLEEIGQVCRQKD 279 (561)
Q Consensus 206 --~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~--tG--~idpl~eI~~ia~~~~ 279 (561)
+++...+...|++++.+++. ...|+++++++|.+ .+.+|+.++.++. .| .+.|+++|+++||+||
T Consensus 175 gs~~i~~~~~~~G~~~~~v~~~-~~~~l~dle~aI~~--------~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g 245 (454)
T TIGR00474 175 GSFRIPDVMEQSGAKLVEVGTT-NRTHLKDYEDAITE--------NTALLLKVHTSNYRIVGFTEEVSIAELVALGREHG 245 (454)
T ss_pred chhhHHHHHHHcCCEEEEeCCC-CCCCHHHHHHhcCc--------CCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcC
Confidence 34544556678888888762 24578999999976 4556665555544 46 4789999999999999
Q ss_pred ceEEechhccccccc----CccccccccCc-cccceeeecCCccccccccceeEEecC
Q psy9807 280 VWLHVDAAYAGSAFI----CPENRYLMKGV-ELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~----~~~~~~~~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
++++||++.|...-. .+......+.+ ..+|.+++|+||||++|. +|+++.++
T Consensus 246 ~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~ 302 (454)
T TIGR00474 246 LPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKK 302 (454)
T ss_pred CeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEEECH
Confidence 999999875431000 00101001111 246999999999999995 78888765
No 203
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.53 E-value=1.3e-11 Score=129.80 Aligned_cols=241 Identities=10% Similarity=-0.026 Sum_probs=142.9
Q ss_pred hhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc
Q psy9807 126 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC 205 (561)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~ 205 (561)
...++-+.+.+|+++.+|.+-.. ....++|+|++++...++.+..+ + ++.+++....
T Consensus 68 G~~~lr~~ia~~~~~~~~~~~~~------~~~vi~t~G~~~~l~~~~~~~~~----------~-------gd~vlv~~P~ 124 (383)
T TIGR03540 68 GMLAYRQAVADWYKRRFGVELDP------ETEVLSLIGSKEGIAHIPLAFVN----------P-------GDIVLVPDPG 124 (383)
T ss_pred CCHHHHHHHHHHHHHhhCCCCCC------CCeEEECCCcHHHHHHHHHHhCC----------C-------CCEEEEeCCC
Confidence 34678889999999888875220 01356778888876555443210 0 2345554545
Q ss_pred -chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhc
Q psy9807 206 -TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQK 278 (561)
Q Consensus 206 -~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~ 278 (561)
.....+++..|.+++.+|. . +..+|+++|++.+.+ .+.+|+++...+.||.+-+ +++|+++|++|
T Consensus 125 y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~--------~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~ 196 (383)
T TIGR03540 125 YPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK--------KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEY 196 (383)
T ss_pred CcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccc--------cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHc
Confidence 4455566788999999998 3 356799999988865 4667777777889999987 78889999999
Q ss_pred CceEEechhcccccccCcccccc--ccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCC
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
|+++++|.+|+-...-....... +.+...-.....++.|.++.|. =+|.++. ++..+.........+ .. .
T Consensus 197 ~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~-~~~l~~~~~~~~~~~-~~----~- 269 (383)
T TIGR03540 197 NIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG-NADLIAGLGKVKTNV-DS----G- 269 (383)
T ss_pred CEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC-CHHHHHHHHHHHHhc-cc----C-
Confidence 99999999997432211011111 1111112356778999887553 2666654 544433221111000 00 0
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV 416 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~ 416 (561)
.+ ......+...+.. +...+++..+...+..+.+.+.|++. ++.+..+.
T Consensus 270 ---------~~-~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~ 318 (383)
T TIGR03540 270 ---------VF-QAIQYAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPK 318 (383)
T ss_pred ---------CC-hHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCC
Confidence 00 0011111111211 34455666677778888899999887 77766443
No 204
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.53 E-value=1.2e-11 Score=130.62 Aligned_cols=240 Identities=14% Similarity=0.072 Sum_probs=139.6
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|.......++.+.+.+++.+ .|.+-+ ....++|+|||+++..++.+... + +++++
T Consensus 62 Y~~~~g~~~lr~~ia~~~~~-~~~~~~-------~~~i~~t~G~~~al~~~~~~l~~----------~-------gd~Vl 116 (397)
T PRK07568 62 YSHSQGIPELREAFAKYYKK-WGIDVE-------PDEILITNGGSEAILFAMMAICD----------P-------GDEIL 116 (397)
T ss_pred cCCCCCCHHHHHHHHHHHHH-hCCCCC-------cceEEEcCChHHHHHHHHHHhcC----------C-------CCEEE
Confidence 33333445666667676653 343211 12578999999997665544211 0 22444
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC--CCC-c-cChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHH
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK--EFL-A-CSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIG 272 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~--~~g-~-~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~ 272 (561)
+.... ......++..|.+++.++. +++ . .|++.|++++.+ .+.+|+.+..++.||.+-+ +++|+
T Consensus 117 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~--------~~~~v~i~~p~NPtG~~~~~~~~~~i~ 188 (397)
T PRK07568 117 VPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP--------KTKAILISNPGNPTGVVYTKEELEMLA 188 (397)
T ss_pred EecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc--------cceEEEEECCCCCCCccCCHHHHHHHH
Confidence 44433 3334445677889999987 233 2 256888888765 4567777778888998864 78899
Q ss_pred HHHhhcCceEEechhcccccccCccccccc--cCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCcccc
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLM--KGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~--~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
++|+++|+++++|.+|+....-.+...... .+...--.+..+++|.++.| .-+|.++..+...+............
T Consensus 189 ~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~- 267 (397)
T PRK07568 189 EIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLS- 267 (397)
T ss_pred HHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCC-
Confidence 999999999999999985422111111111 11111125667999998754 44777776555444322111100000
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
...+...++...+ +...++++.+...+..+.+.+.|++++++.+.
T Consensus 268 -------------------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (397)
T PRK07568 268 -------------------PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCE 314 (397)
T ss_pred -------------------CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 0111111122222 34556667777788888899999888776544
No 205
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.53 E-value=1.6e-12 Score=134.86 Aligned_cols=282 Identities=9% Similarity=0.031 Sum_probs=173.8
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++.+++++.+|.+++ ..++|+|++++...++.+.... + .+.+++.... .....
T Consensus 60 ~~l~~~~a~~~g~~~~---------~I~~~~Gs~e~i~~~~~~~~~~--------g--------~~~vli~~P~y~~y~~ 114 (351)
T PRK01688 60 KAVIENYAAYAGVKPE---------QVLVSRGADEGIELLIRAFCEP--------G--------KDAILYCPPTYGMYSV 114 (351)
T ss_pred HHHHHHHHHHhCCCHH---------HEEEcCCHHHHHHHHHHHhcCC--------C--------CCEEEEcCCCHHHHHH
Confidence 5677788999999875 6789999999876555432100 0 0234444444 44455
Q ss_pred HHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc--CceEEechh
Q psy9807 211 VMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK--DVWLHVDAA 287 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~--~~~lhVDaA 287 (561)
.++..|.+++.+|. +++.+|++++++++ + .+.+|+.+..++.||.+-+.+++.++++.. +.+++||.|
T Consensus 115 ~~~~~G~~~~~v~~~~~~~~d~~~l~~~~-~--------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEa 185 (351)
T PRK01688 115 SAETIGVEIRTVPTLDNWQLDLPAIADNL-D--------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEA 185 (351)
T ss_pred HHHHcCCEEEEeecCCCCCCCHHHHHHhc-c--------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECc
Confidence 67888999999998 77899999998877 3 345677788899999999877777766532 689999999
Q ss_pred cccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 288 YAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
|.-.. ..+.....+..... =.+.-+++|+++.| .-+|.++. +++.+........+| . .+
T Consensus 186 y~~f~-~~~s~~~~~~~~~n-~iv~rSfSK~~glaGlRiGy~i~-~~~~i~~l~~~~~~~---------------~--v~ 245 (351)
T PRK01688 186 YIEFC-PQASLAGWLAEYPH-LVILRTLSKAFALAGLRCGFTLA-NEEVINLLLKVIAPY---------------P--LS 245 (351)
T ss_pred hhhcC-CCCChHHHHhhCCC-EEEEecchHhhcCHHHHHhHHhC-CHHHHHHHHhccCCC---------------C--CC
Confidence 86432 11111111111111 25678999988744 23567665 444443222211122 0 01
Q ss_pred CCcchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHH
Q psy9807 367 RRFRSLKLWFVLRLL---GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWF 443 (561)
Q Consensus 367 r~~~al~lw~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~ 443 (561)
.+...++...+ +.+.+++.++...+..+++.+.|+++++++.+.++..+.+.+++
T Consensus 246 ----~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~------------------ 303 (351)
T PRK01688 246 ----TPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARF------------------ 303 (351)
T ss_pred ----HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEc------------------
Confidence 11111222222 23456666777777788999999888777544455544433321
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECC-E
Q psy9807 444 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRD-V 522 (561)
Q Consensus 444 ~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g-~ 522 (561)
. + ..++.+.|.++|..+..+....| .
T Consensus 304 -------------------------------------------------~--~--~~~l~~~L~~~gi~vr~~~~~~~~~ 330 (351)
T PRK01688 304 -------------------------------------------------T--A--SSAVFKSLWDQGIILRDQNKQPGLS 330 (351)
T ss_pred -------------------------------------------------C--C--HHHHHHHHHHCCeEEEECCCcCCCC
Confidence 1 1 34678888888866554432222 4
Q ss_pred EEEEEEecCCCCCHHHHHHHHHHH
Q psy9807 523 YFLRMAVCSRYSESSDMIYSWNEI 546 (561)
Q Consensus 523 ~~lR~~~~~~~t~~~di~~l~~~l 546 (561)
.++|+++. +++++++++++|
T Consensus 331 ~~iRis~~----~~~e~~~l~~al 350 (351)
T PRK01688 331 NCLRITIG----TREECQRVIDAL 350 (351)
T ss_pred CeEEEeCC----CHHHHHHHHHhh
Confidence 68999966 458999999887
No 206
>PRK07505 hypothetical protein; Provisional
Probab=99.53 E-value=5.8e-12 Score=133.20 Aligned_cols=172 Identities=9% Similarity=-0.022 Sum_probs=105.3
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
.++...++.+.+++++|. + .+++++|++||..++..++..... ++ ..+++++...
T Consensus 89 ~~~~~~~l~~~la~~~~~-~-----------~~~~~sG~~a~~~ai~~~~~~~~~----~~--------~~~vi~~~~~~ 144 (402)
T PRK07505 89 RSQILKDLEEALSELFGA-S-----------VLTFTSCSAAHLGILPLLASGHLT----GG--------VPPHMVFDKNA 144 (402)
T ss_pred hhHHHHHHHHHHHHHhCC-C-----------EEEECChHHHHHHHHHHHHhcccC----CC--------CCCEEEEchhh
Confidence 355667777888888876 3 366778899998888765432110 00 1124333322
Q ss_pred -chHHH--HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceE
Q psy9807 206 -TELEV--VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWL 282 (561)
Q Consensus 206 -~s~~k--aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~l 282 (561)
.|+.. .....+.+++.+| ..|+++|++++++ .+.+++++.+.+.+|.+.|+++|.++|++||+++
T Consensus 145 H~s~~~~~~~~~~~~~v~~~~----~~d~~~l~~~~~~--------~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~l 212 (402)
T PRK07505 145 HASLNILKGICADETEVETID----HNDLDALEDICKT--------NKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFL 212 (402)
T ss_pred hHhHHhhhhhhhcCCeEEEeC----CCCHHHHHHHHhc--------CCCEEEEEecccccCCcCCHHHHHHHHHHcCCEE
Confidence 44422 2222345677777 4689999998865 2345666667778899999999999999999999
Q ss_pred Eechhcccccc--cCccccccccCc--cccceeeecCCccccccccceeEEecChhhH
Q psy9807 283 HVDAAYAGSAF--ICPENRYLMKGV--ELADSFNFNPHKWMLVTFDCSAMWLKDPSWV 336 (561)
Q Consensus 283 hVDaA~gg~~~--~~~~~~~~~~gi--~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l 336 (561)
++|.+|+...+ ....+....-+. .....++.++.|.++.+ .|.+.+.++...
T Consensus 213 i~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~ 268 (402)
T PRK07505 213 YIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQI 268 (402)
T ss_pred EEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHH
Confidence 99999852111 111111000111 12245666899998865 255544454433
No 207
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.52 E-value=2.9e-11 Score=128.06 Aligned_cols=196 Identities=11% Similarity=0.050 Sum_probs=124.8
Q ss_pred HHHHHHHhhcccc-ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q psy9807 105 IVADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRV 183 (561)
Q Consensus 105 ~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~ 183 (561)
.+-+.+...++.. ...|.......++-+.+.+|+.+..|++-+ ....++|+|++++...++.+..+.
T Consensus 53 ~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-------~~~I~it~G~~~al~~~~~~l~~~----- 120 (409)
T PLN00143 53 IAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLS-------PDDVYLTLGCKHAAEIIIKVLARP----- 120 (409)
T ss_pred HHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-------HhhEEEecChHHHHHHHHHHHcCC-----
Confidence 3444444444432 233544445567888899999887765422 126788999988876665542110
Q ss_pred HhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 184 KEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 184 ~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
++.+++.... ......+...|.+++.++. ++..+|+++|++++.+ .+..++.+..+
T Consensus 121 ------------gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~~~~~nP~ 180 (409)
T PLN00143 121 ------------EANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE--------NTIAMVIINPG 180 (409)
T ss_pred ------------CCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc--------CCEEEEEECCC
Confidence 2244444444 4556667788899999987 3457899999988765 34556666678
Q ss_pred CCCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCcccc--ceeeecCCccccccc-cceeEEecCh
Q psy9807 260 TNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELA--DSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 260 t~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~a--Dsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
+.||.+-+ +++|+++|++||+++++|.+|..... .......+..+... =.+..++.|.++.|. -+|.++..++
T Consensus 181 NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~-~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p 259 (409)
T PLN00143 181 NPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVF-GSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDP 259 (409)
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCeEEEEcccccccc-CCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCc
Confidence 89999976 77788889999999999999985322 11100001111111 256789999977664 4777776443
No 208
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.52 E-value=2.6e-11 Score=131.12 Aligned_cols=147 Identities=13% Similarity=0.060 Sum_probs=107.4
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 119 FTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 119 ~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
..|.......++-+.+.+|+.+..|++-+ ....++|+|++++...++.+.... + ++.
T Consensus 109 ~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-------~~~I~it~Ga~~al~~~~~~l~~~---------~-------gD~ 165 (481)
T PTZ00377 109 GAYTDSAGYPFVRKAVAAFIERRDGVPKD-------PSDIFLTDGASSGIKLLLQLLIGD---------P-------SDG 165 (481)
T ss_pred cCcCcccCCHHHHHHHHHHHHHhcCCCCC-------hhhEEEcCCHHHHHHHHHHHhccC---------C-------CCE
Confidence 34555556678889999999987776532 136789999999877666543200 0 223
Q ss_pred eEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHH
Q psy9807 199 LIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEI 271 (561)
Q Consensus 199 ~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI 271 (561)
+++.... ......++..|++++.+|+ . ++.+|+++|++++.+ ....+.++.+++.+...+.||.+-+ +++|
T Consensus 166 Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~--~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i 243 (481)
T PTZ00377 166 VMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQ--AVRNGITPRALVVINPGNPTGQVLTRDVMEEI 243 (481)
T ss_pred EEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHH--HHhcCCCeeEEEEECCCCCCCcCCCHHHHHHH
Confidence 4444444 4455566888999999998 3 358999999999976 4444445766766777889999987 8899
Q ss_pred HHHHhhcCceEEechhccc
Q psy9807 272 GQVCRQKDVWLHVDAAYAG 290 (561)
Q Consensus 272 ~~ia~~~~~~lhVDaA~gg 290 (561)
+++|++||+|+++|.+|+-
T Consensus 244 ~~~a~~~~~~iI~De~Y~~ 262 (481)
T PTZ00377 244 IKFCYEKGIVLMADEVYQE 262 (481)
T ss_pred HHHHHHCCCEEEEehhhHh
Confidence 9999999999999999974
No 209
>PRK07683 aminotransferase A; Validated
Probab=99.52 E-value=1.6e-11 Score=129.14 Aligned_cols=255 Identities=13% Similarity=0.051 Sum_probs=152.6
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+...+......|...+...++++.+.+|+.+..|.+-+ .....++|+|+|+|+..++.+...
T Consensus 46 ~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~------~~~~I~~t~G~~~al~~~~~~l~~-------- 111 (387)
T PRK07683 46 VKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYS------PESEIIVTIGASEAIDIAFRTILE-------- 111 (387)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCcEEEeCChHHHHHHHHHHhCC--------
Confidence 444455555444444554556678999999999887776421 011578999999998665543211
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC 262 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t 262 (561)
+ ++.+++.... .....++...|.+++.+|. ++..+|++++++.+.+ .+.+++++...+.|
T Consensus 112 --~-------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~i~i~~p~NPt 174 (387)
T PRK07683 112 --P-------GTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITE--------KTRCVVLPYPSNPT 174 (387)
T ss_pred --C-------CCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCc--------CceEEEEeCCCCCC
Confidence 0 1234444333 4455666778899999988 4456788899988865 45677778888899
Q ss_pred cccc---CHHHHHHHHhhcCceEEechhcccccccCcccccccc--CccccceeeecCCccccccc-cceeEEecChhhH
Q psy9807 263 CAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMK--GVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWV 336 (561)
Q Consensus 263 G~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~--gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l 336 (561)
|.+- ++++|+++|+++|+++++|.+|+.... .+....... +...-..+..++.|.++.|. =+|.+.. +...+
T Consensus 175 G~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~-~~~l~ 252 (387)
T PRK07683 175 GVTLSKEELQDIADVLKDKNIFVLSDEIYSELVY-EQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA-PSYLA 252 (387)
T ss_pred CcCCCHHHHHHHHHHHHHcCeEEEEeccccccee-CCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEc-CHHHH
Confidence 9874 589999999999999999999985432 221111111 11112467889999998763 2555554 44333
Q ss_pred HHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 337 VNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
...... ..|... + ...+...++...+ |...+++..++..+..+++.+.|.+. ++.+.
T Consensus 253 ~~~~~~-~~~~~~---------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~ 311 (387)
T PRK07683 253 KHILKV-HQYNVT---------------C---ASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVE 311 (387)
T ss_pred HHHHHH-HHhccC---------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCccc
Confidence 322211 112100 0 0111111111122 33445566666677778888888775 55544
No 210
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.51 E-value=7.9e-12 Score=131.07 Aligned_cols=286 Identities=12% Similarity=0.018 Sum_probs=174.5
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccch-HHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACTE-LEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~s-~~ka 211 (561)
++++.+++.+|.+++ ..++|+|+++++..++.+... + ++++++....|+ ....
T Consensus 90 ~lr~~ia~~~~~~~~---------~I~~t~Ga~~~i~~~~~~~~~----------~-------gd~Vlv~~P~y~~y~~~ 143 (380)
T PLN03026 90 RLRAALAEDSGLESE---------NILVGCGADELIDLLMRCVLD----------P-------GDKIIDCPPTFGMYVFD 143 (380)
T ss_pred HHHHHHHHHhCcChh---------hEEEcCCHHHHHHHHHHHhcC----------C-------CCEEEEcCCChHHHHHH
Confidence 466677777887754 578889888887655443210 0 123444444444 3445
Q ss_pred HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhccc
Q psy9807 212 MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAG 290 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg 290 (561)
++..|.+++.+|. +++.+|+++|++++.. . .+.+|+++..++.||.+-|.+++.++++.. +|+++|.||.-
T Consensus 144 ~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~--~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~ 215 (380)
T PLN03026 144 AAVNGAEVIKVPRTPDFSLDVPRIVEAVET--H-----KPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIE 215 (380)
T ss_pred HHHcCCEEEEeecCCCCCcCHHHHHHHHhc--c-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchh
Confidence 6778999999998 7788999999998833 1 466777788999999999999999999865 99999999863
Q ss_pred ccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc
Q psy9807 291 SAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF 369 (561)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~ 369 (561)
.. ........+... .-..+..+++|.++.|. -.|.+.. ++..+.........|- .
T Consensus 216 ~~-~~~~~~~~~~~~-~~viv~~SfSK~~glaGlRiGy~~~-~~~~i~~l~~~~~~~~---------------------~ 271 (380)
T PLN03026 216 FS-TQESRMKWVKKY-DNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYN---------------------V 271 (380)
T ss_pred hc-CCcchHHHHHhC-CCEEEEecchHhhcCccccceeeec-CHHHHHHHHHhcCCCC---------------------C
Confidence 22 111111111111 11367789999987553 3455554 4444433222111110 1
Q ss_pred chHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHh
Q psy9807 370 RSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLL 448 (561)
Q Consensus 370 ~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~ 448 (561)
..+...++...+. .+-+++..+...+..+++.+.|++++++++ .++..+.+.+++.+
T Consensus 272 ~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~--------------------- 329 (380)
T PLN03026 272 SVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTS--------------------- 329 (380)
T ss_pred CHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCC---------------------
Confidence 1222233333332 233556666677777888888888755544 34444444433211
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEE
Q psy9807 449 GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMA 528 (561)
Q Consensus 449 g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~ 528 (561)
+.+ ..++.+.|.+.|..........+..++|++
T Consensus 330 ---------------------------------------------~~~--~~~~~~~l~~~gI~v~~~~~~~~~~~lRis 362 (380)
T PLN03026 330 ---------------------------------------------GRD--AKKLKEDLAKMGVMVRHYNSKELKGYIRVS 362 (380)
T ss_pred ---------------------------------------------CCC--HHHHHHHHHHCCeEEEECCCCCCCCEEEEe
Confidence 011 346788888777654433332345689999
Q ss_pred ecCCCCCHHHHHHHHHHHHHH
Q psy9807 529 VCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 529 ~~~~~t~~~di~~l~~~l~~~ 549 (561)
++ +.+++++++++|+++
T Consensus 363 ~~----~~~~~~~l~~al~~~ 379 (380)
T PLN03026 363 VG----KPEHTDALMEALKQL 379 (380)
T ss_pred cC----CHHHHHHHHHHHHHh
Confidence 76 456899999988753
No 211
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.51 E-value=1.9e-11 Score=129.30 Aligned_cols=262 Identities=11% Similarity=-0.005 Sum_probs=149.5
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+...+......|.......++.+.+.+++++.+|.+-. ....++|+|+++|+..++.+. ..
T Consensus 51 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~~----~~---- 115 (402)
T PRK06107 51 IKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYA-------DNEITVGGGAKQAIFLALMAT----LE---- 115 (402)
T ss_pred HHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-------hhhEEEeCCHHHHHHHHHHHh----cC----
Confidence 444444444433333433334467888999999998887421 125789999999877665431 10
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
+ ++.+++.... .....++...+..++.++. . ++.+|+++|++.+.+ .+.+|+.+..++.
T Consensus 116 --~-------gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~--------~~~~v~l~~p~NP 178 (402)
T PRK06107 116 --A-------GDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP--------RTRWLILNAPSNP 178 (402)
T ss_pred --C-------CCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc--------CceEEEEECCCCC
Confidence 0 1233343333 3344455556677777776 2 356899999998865 4566777778899
Q ss_pred CccccC---HHHHHHHHhhc-CceEEechhcccccccCccccccc---cCccccceeeecCCcccccccc-ceeEEecCh
Q psy9807 262 CCAFDC---LEEIGQVCRQK-DVWLHVDAAYAGSAFICPENRYLM---KGVELADSFNFNPHKWMLVTFD-CSAMWLKDP 333 (561)
Q Consensus 262 tG~idp---l~eI~~ia~~~-~~~lhVDaA~gg~~~~~~~~~~~~---~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~ 333 (561)
||.+-+ +++|+++|++| |+++++|.+|+-...-.+...... .+...--.+..+++|.++.|.- +|.++. ++
T Consensus 179 tG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~-~~ 257 (402)
T PRK06107 179 TGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG-PA 257 (402)
T ss_pred CCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec-CH
Confidence 998764 57778889998 999999999974221111111111 1111113456677999976643 576655 44
Q ss_pred hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 334 SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
..+. .+.....+... ....+..+++.+.+ +...+++..+...+..+.+.+.|++++++.
T Consensus 258 ~~~~-~~~~~~~~~~~------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~ 318 (402)
T PRK06107 258 DLIA-AINKLQSQSSS------------------CPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLS 318 (402)
T ss_pred HHHH-HHHHHHHhccc------------------CCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 3332 22111111000 01112222223333 334455666667777888888888877766
Q ss_pred Eeccccccc
Q psy9807 412 VIYEVLMGL 420 (561)
Q Consensus 412 l~~~~~~~~ 420 (561)
+.. ++.+.
T Consensus 319 ~~~-p~gg~ 326 (402)
T PRK06107 319 CLV-PDGAF 326 (402)
T ss_pred ccC-CCcce
Confidence 543 34444
No 212
>KOG1357|consensus
Probab=99.51 E-value=5.2e-13 Score=133.98 Aligned_cols=343 Identities=10% Similarity=-0.023 Sum_probs=210.5
Q ss_pred CCCCCccccccCCC-CCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCC
Q psy9807 85 THWHSPKFHAYFPT-ANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGT 163 (561)
Q Consensus 85 ~~~~~p~~~~~~~~-~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~g 163 (561)
.+..+-+|+||-.+ ++..+..+..+-...++......+.+. +++-+++.+..|+++|.++. +..+-
T Consensus 139 lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~--~~~hkelE~l~A~f~g~e~a-----------~vF~m 205 (519)
T KOG1357|consen 139 LNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGT--TEEHKELEELVARFLGVEDA-----------IVFSM 205 (519)
T ss_pred eeecccccccccccCCcCChHHHHHHHHhcccccccchhccc--HHHHHHHHHHHHHhcCCcce-----------EEEec
Confidence 34577788888754 444444554444444554444344333 45555666677999999853 44444
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhh
Q psy9807 164 ASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRK 241 (561)
Q Consensus 164 gT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~ 241 (561)
|...|-+.+-+.. + ...+++...- .|+.-+|++.|+.++... +.|+.+||+.|++
T Consensus 206 Gf~TNs~~~p~l~----------~--------~gsLIiSDelNHaSi~~GaRLSgAtiRVfk----HNdm~~LEr~Lrd- 262 (519)
T KOG1357|consen 206 GFATNSMNIPSLL----------G--------KGSLIISDELNHASLITGARLSGATTRVFR----HNDMQGLERLLRD- 262 (519)
T ss_pred cccccccCcceee----------c--------CCcceeeccccchheeccccccCceEEEEe----cCCHHHHHHHHHH-
Confidence 4444422111100 0 0123333333 899999999999999999 8899999999987
Q ss_pred chhhcCCc-------eEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccc--cC--ccccce
Q psy9807 242 SDREMCSD-------LLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLM--KG--VELADS 310 (561)
Q Consensus 242 ~~~~~g~~-------p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~--~g--i~~aDs 310 (561)
....|.. ..+|+...-.++-|.+++|+++.+++|+|.+++|+|.||..+++. +..+.-+ .+ -+.+|.
T Consensus 263 -~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g-~tGrgvce~~g~d~~dvDI 340 (519)
T KOG1357|consen 263 -AIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMG-ATGRGVCEYFGVDPEDVDI 340 (519)
T ss_pred -HHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccC-CCCcceeeccCCCchhhee
Confidence 6555421 245566666678899999999999999999999999999876652 1222211 11 235799
Q ss_pred eeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh----hHHHH
Q psy9807 311 FNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL----GVKYL 386 (561)
Q Consensus 311 i~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~----g~~g~ 386 (561)
+...+.|.++ .+|.....++.... .+...+.+.... -..+.+ -+-....+++.+ |.+..
T Consensus 341 mMGtftKSfg---a~GGyiagsk~lid-~lrt~s~~~~ya------------t~~spp-vaqq~~ssl~~i~G~dgt~~g 403 (519)
T KOG1357|consen 341 MMGTFTKSFG---AAGGYIAGSKELID-YLRTPSPSALYA------------TSLSPP-VAQQILTSVKHIMGEDGTNRG 403 (519)
T ss_pred ecceehhhcc---cccceecCcHHHHh-hhccCCCceeec------------ccCChH-HHHHHHHHHHhhcCCCcccHH
Confidence 9999999887 46666655554433 222222221110 011111 111112233332 46678
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHH
Q psy9807 387 QEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKE 466 (561)
Q Consensus 387 ~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~ 466 (561)
++.+++..++.++|+..++.. ||.+++..+.++|-.-+.+
T Consensus 404 ~~k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~--------------------------------------- 443 (519)
T KOG1357|consen 404 RQKIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYG--------------------------------------- 443 (519)
T ss_pred HHHHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecC---------------------------------------
Confidence 889999999999999999987 9999887666553321110
Q ss_pred HHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEE--E-eeeECCEEEEEEEecCCCCCHHHHHHHH
Q psy9807 467 FEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHL--V-PSKIRDVYFLRMAVCSRYSESSDMIYSW 543 (561)
Q Consensus 467 ~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~--~-~~~~~g~~~lR~~~~~~~t~~~di~~l~ 543 (561)
. .....+.+.|.+.....+ + |..+--....|+|+...+ +.|++++++
T Consensus 444 ----------------------------~-~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~h-t~e~ld~~l 493 (519)
T KOG1357|consen 444 ----------------------------P-AKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASH-TKEDLDRAL 493 (519)
T ss_pred ----------------------------c-ccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccc-cHHHHHHHH
Confidence 0 112245555666544333 2 233323446799877666 667999999
Q ss_pred HHHHHHHHH
Q psy9807 544 NEIKTLTEE 552 (561)
Q Consensus 544 ~~l~~~~~~ 552 (561)
+.+.++++.
T Consensus 494 ~~i~~~g~~ 502 (519)
T KOG1357|consen 494 EVIDRVGDE 502 (519)
T ss_pred HHHhhhchh
Confidence 999888754
No 213
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.51 E-value=1.9e-11 Score=128.97 Aligned_cols=295 Identities=15% Similarity=0.112 Sum_probs=166.7
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELE 209 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~ 209 (561)
.++.+.|+++++.+ ...|++|||+||..|+..||.....+ .++ ...+++.+... -+..
T Consensus 80 ~~la~~L~~~~~~~-----------~~~f~~SGseA~e~Alk~ar~~~~~~---~~~------~r~~ii~~~~~yHG~~~ 139 (397)
T TIGR03246 80 LRLAKKLVDATFAD-----------KVFFCNSGAEANEAALKLARRYALDK---HGA------DKSEIVAFKNSFHGRTL 139 (397)
T ss_pred HHHHHHHHhhCCCC-----------EEEEeCCcHHHHHHHHHHHHHHHHhc---CCC------CCCEEEEECCCcCCccH
Confidence 34444556666543 45899999999999999998753211 000 01234444433 2222
Q ss_pred HHHHhccC------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc----cCHHHHHH
Q psy9807 210 VVMLDWLG------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF----DCLEEIGQ 273 (561)
Q Consensus 210 kaa~~~g~------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i----dpl~eI~~ 273 (561)
-+..+.+. .+..+| ..|+++|++.|.+ .+.+|++.-.....|.+ +++++|.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~l~~--------~~aavi~Epi~~~~G~~~~~~~~l~~l~~ 207 (397)
T TIGR03246 140 FTVSVGGQPKYSQGFAPLPGGIKHAP----YNDLAAAKALISD--------KTCAVIVEPIQGEGGVVPADPAFLKGLRE 207 (397)
T ss_pred HHHHhcCCcccccCCCCCCCceEEeC----CCCHHHHHHHhcc--------CeEEEEEecccCCCCCcCCCHHHHHHHHH
Confidence 23333332 223333 4588999998865 46677777666666744 56999999
Q ss_pred HHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
+|++||+++++|.+|.|......-+.....++ ..|+++ ..|.++.-+..|.+..++. +...+.... . .
T Consensus 208 lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t--~~K~lggG~pigav~~~~~--i~~~~~~~~----~---~ 275 (397)
T TIGR03246 208 LCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDILT--SAKALGGGFPIGAMLTTTE--IAAHLKVGT----H---G 275 (397)
T ss_pred HHHHcCCEEEEechhhcCCccccchhhhhcCC-CCCEEE--eehhhhCCcceeEEEEcHH--HHHhccCCC----c---C
Confidence 99999999999999865422221111111233 368774 5898864455777776542 223232100 0 0
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeccc-cccceeeecccCccc
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVIYEV-LMGLVCFRLKHWQIP 431 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~~~-~~~~v~f~~~~~~~~ 431 (561)
.+. .+-+.......++++.+. -.++.++..++.+++.+.|+++. .+.++... ..+.+
T Consensus 276 -------~t~-~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~---------- 334 (397)
T TIGR03246 276 -------TTY-GGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLL---------- 334 (397)
T ss_pred -------CCC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceE----------
Confidence 000 011112222234444432 24567888888999999888752 12222111 01110
Q ss_pred cccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC-CcHHHHHHHHHHHhCC
Q psy9807 432 LGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG-PNEINEKLLKRINGNG 510 (561)
Q Consensus 432 ~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~-~~~~~~~l~~~L~~~g 510 (561)
+.+.+.+ .+.....+.+.|.++|
T Consensus 335 --------------------------------------------------------~~i~~~~~~~~~~~~~~~~l~~~G 358 (397)
T TIGR03246 335 --------------------------------------------------------IGAVLTEAYQGKAKQFVNAAAEEG 358 (397)
T ss_pred --------------------------------------------------------EEEEEcCchhhHHHHHHHHHHHCC
Confidence 0110100 1123457888899988
Q ss_pred cEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 511 KIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 511 ~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.+... .|..++|++.. ...+++||+++++.|.+..++
T Consensus 359 v~~~~----~g~~~lR~~p~-~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 359 VIALI----AGPNVVRFAPS-LVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred eEEee----cCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHH
Confidence 66532 23458999755 456888999999999887654
No 214
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.51 E-value=5.3e-11 Score=125.84 Aligned_cols=299 Identities=12% Similarity=0.034 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---c
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---T 206 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~ 206 (561)
...++.+.+++++|.+ ..+|++|||+||..|+..||...... .. . ..+...++.... .
T Consensus 80 ~~~~l~~~l~~~~~~~-----------~~~~~~SGs~A~e~ai~~a~~~~~~~--~~---~---~~~~~~i~~~~~~yhg 140 (401)
T TIGR01885 80 VFGEFAEYVTKLFGYD-----------KVLPMNTGAEAVETAIKLARKWGYKV--KG---I---PENQAIIVSAKGNFHG 140 (401)
T ss_pred HHHHHHHHHHhhcCCC-----------EEEEeCccHHHHHHHHHHHHHHhhhh--cC---C---CCCCCEEEEECCCcCc
Confidence 3344455666777764 35899999999999999998753211 00 0 001223333332 2
Q ss_pred hHHHHHHhccC------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHH
Q psy9807 207 ELEVVMLDWLG------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEE 270 (561)
Q Consensus 207 s~~kaa~~~g~------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~e 270 (561)
+...+..+.+. .+..+| ..|+++|++.|++ . +....+|+.....+++|.+-| |++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~le~~l~~--~---~~~~~avi~E~v~~~~G~~~~~~~~l~~ 211 (401)
T TIGR01885 141 RTLGAISMSTDPDSRTNFGPYVPGFKKIP----YNNLEALEEALED--H---GPNVCAFIVEPIQGEAGVVVPDDGYLKK 211 (401)
T ss_pred ccHHHHhCcCCcccccccCCCCCCceEeC----CCCHHHHHHHHHh--c---CCCEEEEEEeCccCCCCCccCCHHHHHH
Confidence 33334443321 233343 4478999998865 2 224556777767778899887 999
Q ss_pred HHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCcccc
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
|.++|++||+++++|.+|.|.......+.....++ ..|.++++ |.++.. ...|+++.+ ++... .+.. .+.
T Consensus 212 l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~-~~di~~~g--K~l~~g~~~ig~v~~~-~~i~~-~~~~--~~~-- 282 (401)
T TIGR01885 212 VRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENV-KPDIVLLG--KALSGGVYPVSAVLAD-DDVML-TIKP--GEH-- 282 (401)
T ss_pred HHHHHHHcCCEEEEechhhCCCccchhhHHhhcCC-CCCEEEee--ccccCCCCCcEEEEEc-HHHHh-hccC--CCC--
Confidence 99999999999999999865321111100001222 35877764 998754 345666653 33332 2221 000
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc--cccceeeeccc
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV--LMGLVCFRLKH 427 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~--~~~~v~f~~~~ 427 (561)
..+.. .-+........+++.+..+ .+.++..++++++.+.|++++ ..++... ...+..
T Consensus 283 ----------~~t~~-~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~----- 342 (401)
T TIGR01885 283 ----------GSTYG-GNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNA----- 342 (401)
T ss_pred ----------CCCCC-CCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEE-----
Confidence 00111 1122223334445544433 344677778999999999872 2222111 111111
Q ss_pred CccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHH
Q psy9807 428 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRIN 507 (561)
Q Consensus 428 ~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~ 507 (561)
+.+..........++.+.|.
T Consensus 343 ------------------------------------------------------------i~~~~~~~~~~~~~l~~~l~ 362 (401)
T TIGR01885 343 ------------------------------------------------------------IVIDESKTGRTAWDLCLKLK 362 (401)
T ss_pred ------------------------------------------------------------EEeccCcchhHHHHHHHHHH
Confidence 11111000113467888898
Q ss_pred hCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 508 GNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 508 ~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+.|. ++.+. +...+|++.+ ...+++||++++++|++..
T Consensus 363 ~~Gv-~v~~~---~~~~lRi~p~-l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 363 EKGL-LAKPT---HGNIIRLAPP-LVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred hCCE-EEEec---CCCEEEEeCC-ccCCHHHHHHHHHHHHHHh
Confidence 8874 44442 3458999865 5678899999999997653
No 215
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.51 E-value=9.3e-12 Score=129.62 Aligned_cols=284 Identities=10% Similarity=0.001 Sum_probs=169.7
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka 211 (561)
++++++++.+|.+++ ..++|+|++++...++.+. .. . ++.+++.... ......
T Consensus 68 ~lr~~ia~~~~~~~~---------~i~~t~G~~~~l~~~~~~~----~~----~---------gd~v~~~~p~y~~~~~~ 121 (359)
T PRK03158 68 ELRTKVAKHLGVDEE---------QLLFGAGLDEVIQMISRAL----LN----P---------GTNTVMAEPTFSQYRHN 121 (359)
T ss_pred HHHHHHHHHhCCCHH---------HEEECCCHHHHHHHHHHHH----hC----C---------CCEEEEcCCCHHHHHHH
Confidence 344555666677654 5788888888765433322 10 0 1234444444 455666
Q ss_pred HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh--cCceEEechhcc
Q psy9807 212 MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ--KDVWLHVDAAYA 289 (561)
Q Consensus 212 a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~--~~~~lhVDaA~g 289 (561)
+...|.+++.+|..++.+|++.|++.+.+ .+.+|+.+..++.||.+-|.++|.++++. +|+++++|.+|.
T Consensus 122 ~~~~g~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~ 193 (359)
T PRK03158 122 AIIEGAEVREVPLKDGGHDLEAMLKAIDE--------QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYY 193 (359)
T ss_pred HHHcCCeEEEEecCCCCcCHHHHHHhcCC--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchH
Confidence 77789999999986678999999888755 45567777889999999999999999887 599999999987
Q ss_pred cccccCccccccccCcc--ccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 290 GSAFICPENRYLMKGVE--LADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 290 g~~~~~~~~~~~~~gi~--~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
.... .+.....+..++ .-..+..++.|.++.|. -+|.++. ++..+.........|
T Consensus 194 ~~~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~~~~~~~~~-------------------- 251 (359)
T PRK03158 194 EYVT-AEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIA-SEELIEKLNIARPPF-------------------- 251 (359)
T ss_pred hhcC-CcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcC-CHHHHHHHHHhcCCC--------------------
Confidence 5332 111111111111 12466679999988653 3566655 443333221111111
Q ss_pred CCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHH
Q psy9807 367 RRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVL 445 (561)
Q Consensus 367 r~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~ 445 (561)
....+...++...+. ...+++..+...+..+++.+.|++. ++.+. ++..+.+..
T Consensus 252 -~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~---------------------- 306 (359)
T PRK03158 252 -NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFV---------------------- 306 (359)
T ss_pred -CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEE----------------------
Confidence 012233333333332 2334455555566677777888776 66654 333332221
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEE
Q psy9807 446 RLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFL 525 (561)
Q Consensus 446 ~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~l 525 (561)
+. +.+ ..++.+.|.+.|..+..+.......++
T Consensus 307 ---------------------------------------------~~-~~~--~~~~~~~l~~~gv~v~~g~~f~~~~~i 338 (359)
T PRK03158 307 ---------------------------------------------DT-GRD--ANELFEALLKKGYIVRSGAALGFPTGV 338 (359)
T ss_pred ---------------------------------------------EC-CCC--HHHHHHHHHHCCeEEeeCCCCCCCCeE
Confidence 11 111 346778888877555444333335689
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 526 RMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 526 R~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
|++++ +.+++++++++|+++
T Consensus 339 Ri~~~----~~~~~~~l~~al~~~ 358 (359)
T PRK03158 339 RITIG----LKEQNDKIIELLKEL 358 (359)
T ss_pred EEecC----CHHHHHHHHHHHHHh
Confidence 99865 567999999999874
No 216
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.50 E-value=1.5e-11 Score=128.20 Aligned_cols=237 Identities=17% Similarity=0.073 Sum_probs=145.1
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
++...++|++. ++.+|.+ .++.+++||.|+..|+.+..-. -++++++..
T Consensus 24 g~~~~~fE~~~----a~~~g~~-----------~~~~~~sgt~Al~~al~~l~~~----------------~gdeVi~p~ 72 (363)
T PF01041_consen 24 GPYVEEFEKEF----AEYFGVK-----------YAVAVSSGTSALHLALRALGLG----------------PGDEVIVPA 72 (363)
T ss_dssp SHHHHHHHHHH----HHHHTSS-----------EEEEESSHHHHHHHHHHHTTGG----------------TTSEEEEES
T ss_pred CHHHHHHHHHH----HHHhCCC-----------eEEEeCChhHHHHHHHHhcCCC----------------cCceEecCC
Confidence 78889999976 5555654 4699999999999888773111 023455544
Q ss_pred cc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCc
Q psy9807 204 AC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDV 280 (561)
Q Consensus 204 s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~ 280 (561)
.. .+...++...|.+++.+++ +++.||+++++++|.+ .+.+|+.+ ...|...++++|.++|++||+
T Consensus 73 ~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~--------~t~ai~~~---h~~G~~~d~~~i~~~~~~~~i 141 (363)
T PF01041_consen 73 YTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITP--------KTKAILVV---HLFGNPADMDAIRAIARKHGI 141 (363)
T ss_dssp SS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHT--------TEEEEEEE----GGGB---HHHHHHHHHHTT-
T ss_pred CcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhcc--------CccEEEEe---cCCCCcccHHHHHHHHHHcCC
Confidence 44 7777888889999999999 7899999999999987 45667664 466777899999999999999
Q ss_pred eEEechhcccccccCccccccccCccccceeeecCC--ccccccccceeEEecChhhHHHhh--ccCCCccccCCCCCCC
Q psy9807 281 WLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPH--KWMLVTFDCSAMWLKDPSWVVNAF--NVDPLYLKHDQQGSAP 356 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~H--K~l~~P~g~g~l~~r~~~~l~~~~--~~~~~yl~~~~~~~~~ 356 (561)
+++-|+||+.+..... ..-|- ..|..++|+| |.+. ....|+++++++....+.. ... +.-... ..
T Consensus 142 ~lIeD~a~a~g~~~~g----~~~G~-~gd~~~fSf~~~K~i~-~geGG~v~~~~~~~~~~~~~~~~~-g~~~~~----~~ 210 (363)
T PF01041_consen 142 PLIEDAAQAFGARYKG----RPVGS-FGDIAIFSFHPTKIIT-TGEGGAVVTNDPELAERARALRNH-GRSRDA----FR 210 (363)
T ss_dssp EEEEE-TTTTT-EETT----EETTS-SSSEEEEESSTTSSS--SSS-EEEEESTHHHHHHHHHHTBT-TEETSE----CS
T ss_pred cEEEccccccCceeCC----EeccC-CCCceEecCCCCCCCc-CCCCeeEEecHHHHHHHhhhhhcc-CcCccc----cc
Confidence 9999999986543321 11111 2366666655 8883 3445777777765444332 111 100000 00
Q ss_pred CCCccc-ccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 357 DYRHWQ-IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 357 ~~~~~~-~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
.+.... +...-+...+.. ++-..-.+.+++++++..++++++.+.|...+++..+..
T Consensus 211 ~~~~~~~~g~n~rm~~~~A--Aigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~ 268 (363)
T PF01041_consen 211 RYRHELPPGYNFRMSELQA--AIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPI 268 (363)
T ss_dssp TTEESSSS--B-B-BHHHH--HHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGC
T ss_pred cccccccCCcccccHHHHH--HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcccccc
Confidence 000000 111112233332 222223455888899999999999999999999877654
No 217
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.50 E-value=1.5e-11 Score=127.93 Aligned_cols=283 Identities=12% Similarity=0.037 Sum_probs=170.8
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka 211 (561)
++++.+++.+|.+.. ...++|+|++++...++.+..+ + ++.+++.... ..+...
T Consensus 67 ~lr~~ia~~~~~~~~--------~~I~~t~G~~~~i~~~~~~~~~----------~-------gd~vlv~~P~y~~~~~~ 121 (356)
T PRK04870 67 ALKAALRAAMGVPAG--------ADVLLGNGSDELIQLLALACAK----------P-------GATVLAPEPGFVMYRMS 121 (356)
T ss_pred HHHHHHHHHhCcCCC--------CcEEEcCCHHHHHHHHHHHhcC----------C-------CCEEEECCCCHHHHHHH
Confidence 445566677777532 1467777776665444332211 0 2244544444 455666
Q ss_pred HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhccc
Q psy9807 212 MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAG 290 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg 290 (561)
+...|.+++.+|. +++.+|++.|++.+.+ . .+.+|+++...+.||.+-+.+++.++++..+.++++|++|..
T Consensus 122 ~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~--~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~ 194 (356)
T PRK04870 122 AKLAGLEFVGVPLTADFTLDLPAMLAAIAE--H-----RPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQP 194 (356)
T ss_pred HHHcCCEEEEecCCCCCCCCHHHHHHHhhc--C-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchh
Confidence 7888999999999 6789999999999864 2 455677777789999999999999888877899999999864
Q ss_pred ccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc
Q psy9807 291 SAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF 369 (561)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~ 369 (561)
.. . ......+...++ -.+..+++| ++.|. -+|.++. +...+.........| . .
T Consensus 195 ~~-~-~~~~~~~~~~~~-vi~~~S~SK-~~~~GlRiG~~i~-~~~~i~~~~~~~~~~---------------~------~ 248 (356)
T PRK04870 195 FA-G-DSWLPRLARFPN-LLVMRTVSK-LGLAGLRLGYLAG-HPAWIAELDKVRPPY---------------N------V 248 (356)
T ss_pred hc-C-cchHHHHhhCCC-EEEEecchh-hhhHHHhhhhhhC-CHHHHHHHHHccCCC---------------c------C
Confidence 22 1 111111111111 367888999 55442 2666655 443333322211111 0 0
Q ss_pred chHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHh
Q psy9807 370 RSLKLWFVLRLL-GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLL 448 (561)
Q Consensus 370 ~al~lw~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~ 448 (561)
..+...++...+ ..+.+++..++..+..+++.+.|++.+++.+. ++..+.+.+
T Consensus 249 ~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~------------------------- 302 (356)
T PRK04870 249 NVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILV------------------------- 302 (356)
T ss_pred CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEE-------------------------
Confidence 111122222222 12346777788888888999999888887653 333333332
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE--CCEEEEE
Q psy9807 449 GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI--RDVYFLR 526 (561)
Q Consensus 449 g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--~g~~~lR 526 (561)
+.. + ..++.+.|.+.|......... .+..++|
T Consensus 303 ------------------------------------------~~~--~--~~~~~~~l~~~gI~v~~~~~f~~~~~~~iR 336 (356)
T PRK04870 303 ------------------------------------------RVP--D--AAAVFDGLKTRGVLVKNLSGMHPLLANCLR 336 (356)
T ss_pred ------------------------------------------ECC--C--HHHHHHHHHHCCEEEEECCCCCCCCCCeEE
Confidence 221 1 246777787777555433322 2356999
Q ss_pred EEecCCCCCHHHHHHHHHHHHHH
Q psy9807 527 MAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 527 ~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
++++ +.+++++++++|+++
T Consensus 337 is~~----~~~~~~~l~~al~~~ 355 (356)
T PRK04870 337 VTVG----TPEENAQFLAALKAA 355 (356)
T ss_pred EeCC----CHHHHHHHHHHHHHh
Confidence 9966 457899999999764
No 218
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.50 E-value=5.4e-12 Score=121.95 Aligned_cols=311 Identities=14% Similarity=0.060 Sum_probs=209.4
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
.+....+-+.+.+.++.++|.... +.+++. +|..|+.-++.|--+.. + ++++++.-
T Consensus 71 ~~~W~~lp~~lgdklApLiGA~~~---------Evvv~d-tts~nl~k~L~aalr~~-----------~---~r~vIv~E 126 (407)
T COG3844 71 KADWFDLPERLGDKLAPLIGARAG---------EVVVTD-TTSINLFKVLAAALRPQ-----------E---GRRVIVSE 126 (407)
T ss_pred CCchhhchhHHHHHhhhhhcCCCC---------ceEEeC-CcchHHHHHHHHHhccC-----------C---CceEEeec
Confidence 344466778889999999999764 445554 46667655554322210 0 23455554
Q ss_pred cc------chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 204 AC------TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 204 s~------~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
.+ |-.+--+.+.+.. .. -.+.+.++++++++.+ ...+|+.+++...||..-++.+|..++|+
T Consensus 127 ~~~fpTdly~a~g~~~~~~~~-~~---~~~~~~P~~~~~~~~d--------d~AvV~L~~V~y~TGql~dm~aiT~~AH~ 194 (407)
T COG3844 127 GDNFPTDLYIAEGLADLLGIG-YD---LEGVIAPRALEEAITD--------DVAVVLLSHVNYKTGQLLDMRAITALAHQ 194 (407)
T ss_pred CCCCCcchhhhcchhhhhccc-cc---ceeeeChHHHHHhhcc--------ceEEEEeccccccccceeeHHHHHHHHHh
Confidence 44 4444444444432 11 2245577899999987 46688999999999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccc-ccccceeEEecChhhHHHhhccCCCccccCCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWML-VTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAP 356 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~-~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (561)
+|+.+.-|=||+++.+..+-+ -..+|+-++|.||.|+ +|.+.+++++.++. ...+......|..+...-.+.
T Consensus 195 ~galv~wDLAHsaGavp~~Lh------~~gaDfaigcsyKYLNgGPGapa~l~v~~~h-~e~~~~~lsgW~gha~pf~m~ 267 (407)
T COG3844 195 HGALVGWDLAHSAGAVPVDLH------AAGADFAIGCSYKYLNGGPGAPAGLFVAPRH-RERSWPPLSGWWGHARPFAME 267 (407)
T ss_pred cCceEEeehhcccCCcceeec------ccCCCeeeeeeceeccCCCCCceeEEecccc-ccccccccccccCCCCcchhh
Confidence 999999999999887765422 2246999999999998 57778888885542 222334445565443211100
Q ss_pred CCCcccccCcCCcc--------hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEeccc----cccce
Q psy9807 357 DYRHWQIPLGRRFR--------SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD-D--RFEVIYEV----LMGLV 421 (561)
Q Consensus 357 ~~~~~~~~~sr~~~--------al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~--g~~l~~~~----~~~~v 421 (561)
. ..--.++.|+|. ...+-.+|..++..++.+..++...++.+|.+.++.. + ++++..|. ..+.|
T Consensus 268 ~-~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqv 346 (407)
T COG3844 268 E-VYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQV 346 (407)
T ss_pred h-ccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhcccee
Confidence 0 000112334442 2345567777788889999999999999999999874 3 56676553 23444
Q ss_pred eeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHH
Q psy9807 422 CFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEK 501 (561)
Q Consensus 422 ~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~ 501 (561)
+| ..+ ...+
T Consensus 347 S~-------------------------------------------------------------------~hp----~~~~ 355 (407)
T COG3844 347 SL-------------------------------------------------------------------YHP----HGYQ 355 (407)
T ss_pred eE-------------------------------------------------------------------ecC----cHHH
Confidence 44 322 1347
Q ss_pred HHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 502 LLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 502 l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+.+.|.+.|.+ ...+...++||.++-.+++-+||=..+++|.++.+..
T Consensus 356 V~qaLi~rGVi----gD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 356 VMQALIDRGVI----GDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred HHHHHHHcCcc----ccccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 88999999866 3446677999999999999999999999998887653
No 219
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.50 E-value=5.4e-12 Score=131.31 Aligned_cols=217 Identities=15% Similarity=0.133 Sum_probs=141.6
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
+....|...++|+.+ +++.|.+ ..+.+++|+.|+..++.+. +. . ++.+
T Consensus 59 ~r~~~P~~~~lE~~l----a~leg~~-----------~av~~sSG~aAi~~al~al----l~----~---------GD~V 106 (384)
T PRK06434 59 TRWGNPTVQAFEEKY----AVLENAE-----------HALSFSSGMGAITSAILSL----IK----K---------GKRI 106 (384)
T ss_pred eCCCChhHHHHHHHH----HHHhCCC-----------cEEEeCCHHHHHHHHHHHH----hC----C---------CCEE
Confidence 445788889999975 6666664 4589999998887777643 11 0 2345
Q ss_pred EEeccc----chHH-HHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHH
Q psy9807 200 IASPAC----TELE-VVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQ 273 (561)
Q Consensus 200 vv~~s~----~s~~-kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ 273 (561)
++.... +.+. ..+...|+++..+++ +...++ ++. ..+.+|.....++.++.+.|+++|++
T Consensus 107 l~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~-------l~~-------~~tklv~~e~~snpt~~v~Di~~I~~ 172 (384)
T PRK06434 107 LSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD-------FDP-------SNYDLIYAESITNPTLKVPDIKNVSS 172 (384)
T ss_pred EEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee-------ecC-------CCeeEEEEEcCCCCCceeecHHHHHH
Confidence 543221 3332 444567888888886 222222 222 14667888888889999999999999
Q ss_pred HHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
+|++++ +.||++|+.....-| . + ..+|.+++|+||+++++.+ .|++.+++.....+.......
T Consensus 173 la~~~~--lvVD~t~~s~~~~~p-l-----~-~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~------ 237 (384)
T PRK06434 173 FCHEND--VIVDATFASPYNQNP-L-----D-LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKT------ 237 (384)
T ss_pred HHHHcC--eEEECCCCCcccCCc-h-----h-cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHh------
Confidence 999998 567999975432222 1 1 1469999999999998876 666666565432222110000
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.+.....+..|..++ |.+.+..++++..+++..+.+.|+.+|.++-
T Consensus 238 -------------~G~~~~~~~A~l~~~--gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~ 283 (384)
T PRK06434 238 -------------LGSNPDPIQAYLALR--GLKTLGLRMEKHNKNGMELARFLRDSKKISN 283 (384)
T ss_pred -------------cCCCCCHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccE
Confidence 011123445555444 4555788999999999999999999988753
No 220
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.49 E-value=3.1e-11 Score=127.58 Aligned_cols=316 Identities=11% Similarity=-0.007 Sum_probs=179.2
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|...+...++.+.+.+|+.+. |.+-+ ....++|+|+++++..++.+.... ++.++
T Consensus 69 Y~~~~g~~~lr~aia~~~~~~-~~~~~-------~~~i~~t~G~~~al~~~~~~l~~~-----------------gd~v~ 123 (401)
T TIGR01264 69 YAPTVGALSAREAIASYYHNP-DGPIE-------ADDVVLCSGCSHAIEMCIAALANA-----------------GQNIL 123 (401)
T ss_pred CCCCCCCHHHHHHHHHHHhhc-CCCCC-------HHHEEECcChHHHHHHHHHHhCCC-----------------CCEEE
Confidence 434444566777777777652 32211 125788999999876665543110 12444
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHH
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQ 273 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~ 273 (561)
+.... ......+...|.+++.++. +++.+|++.|++.+.+ .+.+|+++...+.||.+- .+++|++
T Consensus 124 i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~~~~p~NPtG~~~~~~~~~~l~~ 195 (401)
T TIGR01264 124 VPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE--------KTAALIVNNPSNPCGSVFSRQHLEEILA 195 (401)
T ss_pred EeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc--------CceEEEEcCCCCCCCCCCCHHHHHHHHH
Confidence 44444 3445566778889888887 3578999999988765 345667777788899885 5888999
Q ss_pred HHhhcCceEEechhcccccccCccccccccCccc-c-ceeeecCCccccccc-cceeEEecChh-hHHHhhccCCCcccc
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVEL-A-DSFNFNPHKWMLVTF-DCSAMWLKDPS-WVVNAFNVDPLYLKH 349 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~-a-Dsi~~~~HK~l~~P~-g~g~l~~r~~~-~l~~~~~~~~~yl~~ 349 (561)
+|+++|+++++|.+|.....-...... +..+.. . -.+..++.|.++.|. -+|.++..+.. .+.........+...
T Consensus 196 ~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~ 274 (401)
T TIGR01264 196 VAERQCLPIIADEIYGDMVFSGATFEP-LASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQR 274 (401)
T ss_pred HHHHCCCEEEEEhhhhhhccCCccccc-HHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhc
Confidence 999999999999999853321111111 111111 1 256789999766553 47777765421 111111100000000
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecc
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL---GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLK 426 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~ 426 (561)
. ++ ...+...++...+ ....+++..+...+..+++.+.|++.|++....+.....+.++++
T Consensus 275 ~----------~~------~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~ 338 (401)
T TIGR01264 275 I----------LG------PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIE 338 (401)
T ss_pred c----------CC------CCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEec
Confidence 0 00 0111112222222 235566677777778888889998887766544433333333221
Q ss_pred cCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHH
Q psy9807 427 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRI 506 (561)
Q Consensus 427 ~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L 506 (561)
... ..+. ....++.+.+
T Consensus 339 ~~~--------------------------------------------------------------~~~~-~~~~~~~~~l 355 (401)
T TIGR01264 339 MEH--------------------------------------------------------------FPEF-KNDVEFTERL 355 (401)
T ss_pred ccc--------------------------------------------------------------cCCC-CCHHHHHHHH
Confidence 100 0000 0134667777
Q ss_pred H-hCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 507 N-GNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 507 ~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
. +.|..+..+.......++|++++. .++++++.++.|.+..++
T Consensus 356 ~~~~gI~v~pg~~f~~~~~iRis~~~---~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 356 VAEQSVFCLPGSCFEYPGFFRVVLTV---PVVMMEEACSRIQEFCER 399 (401)
T ss_pred HHhCCEEEeCchhcCCCCeEEEEEcC---CHHHHHHHHHHHHHHHhc
Confidence 6 556555444333335699999874 357888888888776543
No 221
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.49 E-value=5.9e-11 Score=125.18 Aligned_cols=196 Identities=14% Similarity=0.125 Sum_probs=123.7
Q ss_pred HHHHHHHHhhcccc---ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHH
Q psy9807 104 AIVADILSDSIACI---GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTM 180 (561)
Q Consensus 104 ~~~~~~l~~~~n~~---~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~ 180 (561)
..+.+.+...++.. ...|.......++.+.+.+++.+..+.+-+ ....++|+|+|++...++.+...
T Consensus 49 ~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-------~~~i~~t~G~~~al~~~~~~l~~--- 118 (394)
T PRK06836 49 AAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLT-------ADHIVMTCGAAGALNVALKAILN--- 118 (394)
T ss_pred HHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCC-------cCcEEEeCChHHHHHHHHHHhcC---
Confidence 34445544444321 233434445566777788888776554211 12578999998887655543210
Q ss_pred HHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CC-CccChhhHHHHHhhhchhhcCCceEEEEEec
Q psy9807 181 QRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EF-LACSGGKGGGVIQRKSDREMCSDLLQVVATL 257 (561)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~-g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~ 257 (561)
+ ++.+++.... ......+...|.+++.+|. ++ +.+|+++|++.+.+ .+.+|+++.
T Consensus 119 -------~-------gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~--------~~~~v~~~~ 176 (394)
T PRK06836 119 -------P-------GDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITP--------KTKAVIINS 176 (394)
T ss_pred -------C-------CCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCc--------CceEEEEeC
Confidence 0 1234443333 4455566778899999999 44 68999999999866 466777788
Q ss_pred CCCCCccccC---HHHHHHHHhh------cCceEEechhcccccccCccccccccCccccceeeecCCcccccc-cccee
Q psy9807 258 GTTNCCAFDC---LEEIGQVCRQ------KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSA 327 (561)
Q Consensus 258 gtt~tG~idp---l~eI~~ia~~------~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~ 327 (561)
.++.||.+.| +++|+++|++ ||+++++|.+|.....-...........+ -..+..+++|.++.| .-+|.
T Consensus 177 p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~pGlRiG~ 255 (394)
T PRK06836 177 PNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYD-NSIVVYSFSKSLSLPGERIGY 255 (394)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccC-cEEEEecchhhccCcceeeEE
Confidence 8999999876 6666677888 89999999999753211101111111121 247778999999855 35788
Q ss_pred EEecC
Q psy9807 328 MWLKD 332 (561)
Q Consensus 328 l~~r~ 332 (561)
+...+
T Consensus 256 ~~~~~ 260 (394)
T PRK06836 256 IAVNP 260 (394)
T ss_pred EecCH
Confidence 77743
No 222
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.49 E-value=1.9e-11 Score=129.90 Aligned_cols=246 Identities=12% Similarity=0.054 Sum_probs=145.1
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
+|...++|+++ ++.+|.+ ..++++|||+|+..++.+.......+. ++. -++++++..
T Consensus 62 G~~~~~fe~~l----A~~~g~~-----------~~v~~~sGt~al~~aL~al~~~~~~~~-----~~~---pGd~VIv~~ 118 (438)
T PRK15407 62 GRFNDAFEKKL----AEFLGVR-----------YALLVNSGSSANLLAFSALTSPKLGDR-----ALK---PGDEVITVA 118 (438)
T ss_pred ChhHHHHHHHH----HHHhCCC-----------eEEEECCHHHHHHHHHHHHhhcccccc-----CCC---CCCEEEECC
Confidence 45556777765 5556654 368999999999988876532211110 000 022444444
Q ss_pred cc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCc
Q psy9807 204 AC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDV 280 (561)
Q Consensus 204 s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~ 280 (561)
.. .+...++...|..++.+++ .++.+|++++++++.+ .+.+|+++. ..|...++++|.++|++||+
T Consensus 119 ~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~--------~tkaVi~~~---~~G~p~dl~~I~~la~~~gi 187 (438)
T PRK15407 119 AGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP--------KTKAIMIAH---TLGNPFDLAAVKAFCDKHNL 187 (438)
T ss_pred CCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc--------CCeEEEEeC---CCCChhhHHHHHHHHHHCCC
Confidence 44 5555666777888888888 5688999999998865 455666654 35777899999999999999
Q ss_pred eEEechhcccccccCccccccccCccccceeeecCC--ccccccccceeEEecChhhHHHhh--ccCC-C---------c
Q psy9807 281 WLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPH--KWMLVTFDCSAMWLKDPSWVVNAF--NVDP-L---------Y 346 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~H--K~l~~P~g~g~l~~r~~~~l~~~~--~~~~-~---------y 346 (561)
++++|+||+.+.......-+ .+ .|.-++|+| |.+.+- ..|+++++++....... .... . +
T Consensus 188 ~vIeDaa~a~G~~~~g~~~G---~~--gd~~~fSf~~~k~~~~g-eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~ 261 (438)
T PRK15407 188 WLIEDNCDALGSTYDGRMTG---TF--GDIATLSFYPAHHITMG-EGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNT 261 (438)
T ss_pred EEEEECccchhhhcCCeeee---cc--CceEEEeCCCCCCcccc-CceEEEECCHHHHHHHHHHHHhCcccccccccccc
Confidence 99999999865544321111 11 255555554 656543 34778877764433221 1100 0 0
Q ss_pred cccC--CC-CCCC-CCC-ccc-ccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy9807 347 LKHD--QQ-GSAP-DYR-HWQ-IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR 409 (561)
Q Consensus 347 l~~~--~~-~~~~-~~~-~~~-~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g 409 (561)
.... .. +..+ .+. .+. ...+-.++--.+.+++-..-.+.+++++++..++++++.+.|..+|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 262 CGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred cccccccccccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 0000 00 0000 000 000 00111223333444454445667888999999999999999998875
No 223
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.49 E-value=9.4e-12 Score=129.24 Aligned_cols=224 Identities=14% Similarity=0.140 Sum_probs=147.3
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q psy9807 118 GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 197 (561)
Q Consensus 118 ~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~ 197 (561)
.++....|....+|+.+ +++-|.. ..++++||..|...++.+.... ++
T Consensus 48 ~Y~R~gnPt~~~le~~l----a~Le~g~-----------~a~~~~SGmaAi~~~l~~ll~~-----------------Gd 95 (386)
T PF01053_consen 48 IYSRYGNPTVRALEQRL----AALEGGE-----------DALLFSSGMAAISAALLALLKP-----------------GD 95 (386)
T ss_dssp SBTTTC-HHHHHHHHHH----HHHHT-S-----------EEEEESSHHHHHHHHHHHHS-T-----------------TB
T ss_pred ceeccccccHHHHHHHH----HHhhccc-----------ceeeccchHHHHHHHHHhhccc-----------------CC
Confidence 33445678888888866 6665553 4688899977765655543111 23
Q ss_pred ceEEeccc----chHHH-HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHH
Q psy9807 198 NLIASPAC----TELEV-VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIG 272 (561)
Q Consensus 198 ~~vv~~s~----~s~~k-aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~ 272 (561)
.+++...- +.+.+ -....|+++..++ .-|+++|++++++ ++.+|.+...++.+..+-||++|+
T Consensus 96 ~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d----~~d~~~l~~~l~~--------~t~~v~~EspsNP~l~v~Dl~~i~ 163 (386)
T PF01053_consen 96 HIVASDDLYGGTYRLLEELLPRFGVEVTFVD----PTDLEALEAALRP--------NTKLVFLESPSNPTLEVPDLEAIA 163 (386)
T ss_dssp EEEEESSSSHHHHHHHHHCHHHTTSEEEEES----TTSHHHHHHHHCT--------TEEEEEEESSBTTTTB---HHHHH
T ss_pred ceEecCCccCcchhhhhhhhcccCcEEEEeC----chhHHHHHhhccc--------cceEEEEEcCCCcccccccHHHHH
Confidence 44444333 33333 2344688888887 4689999999987 688999999999999999999999
Q ss_pred HHHhhcC-ceEEechhcccccccCccccccccCccccceeeecCCccccccc--cceeEEecChhhHHHhhccCCCcccc
Q psy9807 273 QVCRQKD-VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF--DCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 273 ~ia~~~~-~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~--g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
++||++| +++.||.+|+....+.| + -- .||.+..|..|++++.. -.|++.+++...+...+......
T Consensus 164 ~~a~~~g~~~~vVDnT~atp~~~~p-L---~~---GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~--- 233 (386)
T PF01053_consen 164 KLAKEHGDILVVVDNTFATPYNQNP-L---EL---GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRL--- 233 (386)
T ss_dssp HHHHHTTT-EEEEECTTTHTTTC-G-G---GG---T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHH---
T ss_pred HHHHHhCCceEEeeccccceeeecc-C---cC---CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhh---
Confidence 9999998 99999999997644433 1 11 36999999999998553 36777776633332221110000
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.+-...+...|..++ |...+.-+++++.++|+++++.|+++|.++-
T Consensus 234 ---------------~G~~~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~ 279 (386)
T PF01053_consen 234 ---------------LGATLSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEEHPKVKR 279 (386)
T ss_dssp ---------------HT-B--HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred ---------------cCccchHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 011134455676555 6667888999999999999999999998863
No 224
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.48 E-value=9e-12 Score=129.79 Aligned_cols=217 Identities=12% Similarity=0.087 Sum_probs=140.3
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|....+|+.+ +.+-|-+ ..+++++|+.|+..++.+..+. ++.+++
T Consensus 61 ~gnPt~~~Le~~l----a~le~~~-----------~~v~~sSG~aAi~~~l~all~~-----------------GD~Vlv 108 (395)
T PRK05967 61 RGTPTTDALCKAI----DALEGSA-----------GTILVPSGLAAVTVPFLGFLSP-----------------GDHALI 108 (395)
T ss_pred CCChHHHHHHHHH----HHHhCCC-----------CEEEECcHHHHHHHHHHHhcCC-----------------CCEEEE
Confidence 4556666666644 5554432 4688888988877666543110 234555
Q ss_pred eccc-chHH----HHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 202 SPAC-TELE----VVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 202 ~~s~-~s~~----kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
..+. .+.. ..+...|+++..++.. +.+.++++|++ ++.+|+++..++.++.+.||++|+++|+
T Consensus 109 ~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~----~~e~l~~al~~--------~TklV~lesPsNP~l~v~dl~~I~~la~ 176 (395)
T PRK05967 109 VDSVYYPTRHFCDTMLKRLGVEVEYYDPE----IGAGIAKLMRP--------NTKVVHTEAPGSNTFEMQDIPAIAEAAH 176 (395)
T ss_pred ccCCcHHHHHHHHHHHHhcCeEEEEeCCC----CHHHHHHhcCc--------CceEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 4444 2322 2345567888877632 34778888866 5778999998899999999999999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
++|++++||.+|+.....-| +.- .||.+..+..|++++-.+ .|++ +.++........ +... .|
T Consensus 177 ~~g~~vvVD~t~a~p~~~~p----l~~---GaDivv~S~tKy~~Gh~d~~~G~v-~~~~~~~~~l~~----~~~~--~G- 241 (395)
T PRK05967 177 RHGAIVMMDNTWATPLYFRP----LDF---GVDISIHAATKYPSGHSDILLGTV-SANEKCWPQLLE----AHGT--LG- 241 (395)
T ss_pred HhCCEEEEECCccCceecCh----hHc---CCCEEEEecccccCCCCCeeEEEE-EcCHHHHHHHHH----HHHH--cC-
Confidence 99999999999986433322 112 359999999999764211 4544 334332221110 0000 01
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
-...+...|..++ |.+.+.-+++++.++|..+++.|+++|.++
T Consensus 242 ------------~~~~p~da~l~~r--gl~Tl~lR~~~~~~na~~lA~~L~~hp~v~ 284 (395)
T PRK05967 242 ------------LCAGPDDTYQILR--GLRTMGIRLEHHRKSALEIARWLEGRPDVA 284 (395)
T ss_pred ------------CCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 1123445565444 555678899999999999999999999875
No 225
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=7.5e-12 Score=124.67 Aligned_cols=239 Identities=11% Similarity=0.048 Sum_probs=160.1
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|..+.-..++|..+++...++||..-. -+=.-|||.||+.+..+..+. + +.+
T Consensus 63 yYgGce~VD~vE~laierak~LFga~~a----------nVQPhSGs~AN~av~~All~p--------G---------Dti 115 (413)
T COG0112 63 YYGGCEYVDEVEELAIERAKKLFGAEYA----------NVQPHSGSQANQAVYLALLQP--------G---------DTI 115 (413)
T ss_pred ccCCCeeHHHHHHHHHHHHHHHhCCCcc----------ccCCCCchHHHHHHHHHHcCC--------C---------CeE
Confidence 3666777889999999999999999732 356678999998877664321 1 111
Q ss_pred EE-eccc---chHHHHHHhcc--CCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHH
Q psy9807 200 IA-SPAC---TELEVVMLDWL--GKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEI 271 (561)
Q Consensus 200 vv-~~s~---~s~~kaa~~~g--~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI 271 (561)
.. ..++ -+........| .+++..++ +++.+|.|++++.+.+ . +|++|++ |.+..--.-|++++
T Consensus 116 mgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e--~-----kPK~ii~--G~SaY~r~id~~~~ 186 (413)
T COG0112 116 MGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKE--V-----KPKLIIA--GGSAYSRPIDFKRF 186 (413)
T ss_pred ecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHH--h-----CCCEEEE--CccccccccCHHHH
Confidence 11 1111 01000001122 24555566 6699999999999987 3 7887776 66666677899999
Q ss_pred HHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCC
Q psy9807 272 GQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 272 ~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
.+||++.|++|.+|.||-++.+..-.+.. -+..||.++.+.||+|.+|.| |++++++.+ +.+.++.. ++.
T Consensus 187 reIad~VGA~L~~DmAHiaGLVA~G~~p~---P~~~AdvVTtTTHKTlrGPrG-G~Il~~~ee-l~kkin~a---VFP-- 256 (413)
T COG0112 187 REIADEVGAYLMVDMAHVAGLIAGGVHPN---PLPHADVVTTTTHKTLRGPRG-GIILTNDEE-LAKKINSA---VFP-- 256 (413)
T ss_pred HHHHHHhCceEEehHHHHHHHHhcccCCC---CCCccceEeCCcccCCCCCCc-eEEEeccHH-HHHHhhhh---cCC--
Confidence 99999999999999999877665443333 355689999999999999985 556665533 32222211 000
Q ss_pred CCCCCCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 352 QGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
+.+++... ...+...+++....-++++..++..++|+.|++.|.+. |+++++.
T Consensus 257 ----------g~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsG 310 (413)
T COG0112 257 ----------GLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSG 310 (413)
T ss_pred ----------ccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecC
Confidence 11111111 12233445666667788899999999999999999996 9999863
No 226
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.48 E-value=8.7e-12 Score=128.23 Aligned_cols=214 Identities=11% Similarity=-0.028 Sum_probs=132.0
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++.+++++++|.+++ ..++|+|++++... +..+. . .+++++.... ..+..
T Consensus 50 ~~lr~~la~~~~~~~~---------~i~~t~G~~~~i~~-~~~~l----~--------------~g~vl~~~p~y~~~~~ 101 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA---------SVLPVNGAQEAIYL-LPRLL----A--------------PGRVLVLAPTYSEYAR 101 (330)
T ss_pred HHHHHHHHHHhCCChh---------hEEECCCHHHHHHH-HHHHh----C--------------CCeEEEeCCCcHHHHH
Confidence 5566677888887643 56777777766544 32221 0 1134443333 55666
Q ss_pred HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEechh
Q psy9807 211 VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVDAA 287 (561)
Q Consensus 211 aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA 287 (561)
.+...|.+++.++ |++.|++.+++ +.+|+.+..++.||.+-| +++|+++|++||+++++|.+
T Consensus 102 ~~~~~g~~~~~~~------d~~~l~~~~~~---------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~ 166 (330)
T TIGR01140 102 AWRAAGHEVVELP------DLDRLPAALEE---------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEA 166 (330)
T ss_pred HHHHcCCEEEEeC------CHHHHHhhccc---------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECc
Confidence 6677888888887 88999888743 235667777899999988 67778888999999999999
Q ss_pred cccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 288 YAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
|+.... .+....... ....+.+..+++|+++.| ..+|.++.++ ..+.........+
T Consensus 167 y~~~~~-~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~-------------------- 223 (330)
T TIGR01140 167 FIDFTP-DASLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFVVAHP-ALLARLREALGPW-------------------- 223 (330)
T ss_pred ccccCC-ccchhhHhc-cCCCEEEEEecchhhcCchhhhhheeCCH-HHHHHHHhcCCCC--------------------
Confidence 975432 211111111 112358888999999856 4578888744 3333222111111
Q ss_pred CCcchHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 367 RRFRSLKLWFVLRLLGVKY-LQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 367 r~~~al~lw~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
....+...++.+.+...+ .++..++..++.+++.+.|++.+.+++
T Consensus 224 -~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 269 (330)
T TIGR01140 224 -TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEV 269 (330)
T ss_pred -CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 012223333444443333 356667788888999999998865554
No 227
>PRK07908 hypothetical protein; Provisional
Probab=99.48 E-value=2.4e-11 Score=126.01 Aligned_cols=278 Identities=13% Similarity=0.026 Sum_probs=168.5
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka 211 (561)
++++++++.+|.+++ ..++|+|+++++..++. . . .+++++.... ......
T Consensus 62 ~lr~aia~~~~~~~~---------~I~it~Ga~~al~~~~~-----l-~--------------~~~viv~~P~y~~~~~~ 112 (349)
T PRK07908 62 RARAAVAARHGRTPD---------EVLLLAGAAEGFALLAR-----L-R--------------PRRAAVVHPSFTEPEAA 112 (349)
T ss_pred HHHHHHHHHhCcChh---------hEEECCCHHHHHHHHHh-----c-C--------------CCeEEEeCCCChHHHHH
Confidence 455666777787764 68999999998754433 1 0 0134443333 344456
Q ss_pred HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhccc
Q psy9807 212 MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAG 290 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg 290 (561)
++..|.+++.+|. .++.+|++++ .+ .+.+++.+..++.||.+-|.++|.++|++ +.++++|++|+-
T Consensus 113 ~~~~G~~i~~v~~~~~~~~d~~~l----~~--------~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~ 179 (349)
T PRK07908 113 LRAAGIPVHRVVLDPPFRLDPAAV----PD--------DADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFAD 179 (349)
T ss_pred HHHcCCEEEeeccCcccCcChhHh----cc--------CCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchh
Confidence 6778999999998 5578888754 23 34467778889999999999999999974 789999999874
Q ss_pred ccccCccccccccCccccceeee-cCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC
Q psy9807 291 SAFICPENRYLMKGVELADSFNF-NPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR 368 (561)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~-~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~ 368 (561)
.. ... ... +...+.-+++.+ +++|.++.| .-+|.++. ++..+.........| ... +..
T Consensus 180 ~~-~~~-~~~-l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~-~~~~~~~~~~~~~~~---------------~~~-~~~ 239 (349)
T PRK07908 180 AV-PGE-PES-LAGDDLPGVLVLRSLTKTWSLAGLRVGYALG-APDVLARLTRGRAHW---------------PVG-TLQ 239 (349)
T ss_pred hc-cCC-ccc-cccccCCCEEEEeecccccCCccceeeeeec-CHHHHHHHHhcCCCC---------------Ccc-HHH
Confidence 31 111 111 111112245555 899988744 44788886 444443321111111 000 000
Q ss_pred cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHh
Q psy9807 369 FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLL 448 (561)
Q Consensus 369 ~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~ 448 (561)
..++..| ++..+...++++.++..+..+++.+.|++. ++++..++..+.+.+++
T Consensus 240 ~~a~~~~--~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~----------------------- 293 (349)
T PRK07908 240 LEAIAAC--CAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRV----------------------- 293 (349)
T ss_pred HHHHHHH--hcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEEC-----------------------
Confidence 1111111 111123446667777888888899999887 78776655555444322
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeEC--CEEEEE
Q psy9807 449 GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIR--DVYFLR 526 (561)
Q Consensus 449 g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--g~~~lR 526 (561)
++ ...+.+.|.+.|..+..+.... +..++|
T Consensus 294 --------------------------------------------~~----~~~~~~~l~~~gI~v~~g~~f~~~~~~~vR 325 (349)
T PRK07908 294 --------------------------------------------PD----AELLRKRLRERGIAVRRGDTFPGLDPDYLR 325 (349)
T ss_pred --------------------------------------------Cc----HHHHHHHHHhCCEEEEECCCCCCCCCCeEE
Confidence 11 2356677777775554433322 356999
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 527 MAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 527 ~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+++. +++++++++++|+++.
T Consensus 326 is~~----~~~~~~~l~~al~~~~ 345 (349)
T PRK07908 326 LAVR----PRAEVPVLVQALAEIL 345 (349)
T ss_pred EEeC----CCccHHHHHHHHHHHH
Confidence 9974 4568999999998764
No 228
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.47 E-value=3.4e-11 Score=129.94 Aligned_cols=181 Identities=14% Similarity=0.164 Sum_probs=119.8
Q ss_pred hhHHHHHHHHHHHHHhcC----CCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 126 ACTELEVVMLDWLGKMLD----LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 126 ~~~~lE~~~~~~la~l~g----~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...++-+.+.+|+.+.+| ++++ ..++|+|+++++...+.+..+ | ++.+++
T Consensus 95 G~~~LR~aiA~~l~~~~g~~v~v~pe---------~Ivit~Ga~~al~~l~~~l~~----------p-------GD~Vlv 148 (496)
T PLN02376 95 GLKKFRQAIAHFMGKARGGKVTFDPE---------RVVMSGGATGANETIMFCLAD----------P-------GDVFLI 148 (496)
T ss_pred CcHHHHHHHHHHHHHHhCCCCcCChh---------hEEEccchHHHHHHHHHHhCC----------C-------CCEEEE
Confidence 335677888889988877 4443 678999999987665554311 1 223444
Q ss_pred ecccch-HHHHHH-hccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHH
Q psy9807 202 SPACTE-LEVVML-DWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQ 273 (561)
Q Consensus 202 ~~s~~s-~~kaa~-~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ 273 (561)
....|. +...+. ..|++++.||+ +++.+|++++++++++ ..+.+.++.+|+.+...+.||.+-+ +++|++
T Consensus 149 ~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~--a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~ 226 (496)
T PLN02376 149 PSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKK--AQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVR 226 (496)
T ss_pred CCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHH--HHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHH
Confidence 444443 444454 47899999998 3578999999988755 3333446777777888889999976 566788
Q ss_pred HHhhcCceEEechhcccccccCccccc---cccCcc----ccc--eeeecCCcccccc-ccceeEEecChh
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRY---LMKGVE----LAD--SFNFNPHKWMLVT-FDCSAMWLKDPS 334 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~---~~~gi~----~aD--si~~~~HK~l~~P-~g~g~l~~r~~~ 334 (561)
+|++||+++++|.+|+....-.+.... +....+ ..| .+..+++|.++.| .-+|.++..+..
T Consensus 227 ~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~ 297 (496)
T PLN02376 227 FVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDS 297 (496)
T ss_pred HHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHH
Confidence 899999999999999864332222211 111100 012 2467999999866 558888875543
No 229
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.47 E-value=8.9e-12 Score=129.47 Aligned_cols=221 Identities=10% Similarity=-0.031 Sum_probs=135.2
Q ss_pred HHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-cceEEecccch-HHHH
Q psy9807 134 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII-ANLIASPACTE-LEVV 211 (561)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~-~~~vv~~s~~s-~~ka 211 (561)
+++.+++.+|.+++ ..++|+|++++....+.+... + + +.+++....|+ ....
T Consensus 65 Lr~aia~~~~~~~~---------~I~it~Gs~~~i~~~~~~~~~----------~-------g~d~vlv~~P~y~~y~~~ 118 (354)
T PRK04635 65 LINAYSAYAGVAPE---------QILTSRGADEAIELLIRAFCE----------P-------GQDSIACFGPTYGMYAIS 118 (354)
T ss_pred HHHHHHHHhCcCHH---------HEEEeCCHHHHHHHHHHHhcC----------C-------CCCeEEEcCCChHHHHHH
Confidence 34455667788765 678999998887655443210 0 1 24555444444 4555
Q ss_pred HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc-CceEEechhcc
Q psy9807 212 MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK-DVWLHVDAAYA 289 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~-~~~lhVDaA~g 289 (561)
++..|.+++.+|. +++.+|++.++ .+ . ++.+|+++..++.||.+-|.+++.++++.. ++++++|+||.
T Consensus 119 ~~~~g~~v~~v~~~~~~~~~~~~l~-~~-~--------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~ 188 (354)
T PRK04635 119 AETFNVGVKALPLTADYQLPLDYIE-QL-D--------GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI 188 (354)
T ss_pred HHHcCCEEEEEecCCCCCCCHHHHH-hc-c--------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH
Confidence 7788999999999 67889998886 33 3 356778889999999999999999998864 79999999987
Q ss_pred cccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC
Q psy9807 290 GSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR 368 (561)
Q Consensus 290 g~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~ 368 (561)
-... ...........+. =.+..+++|+++.| .-+|.++. +++.+.........| .
T Consensus 189 ~~~~-~~s~~~~~~~~~~-~iv~~S~SK~~~l~GlRlG~~i~-~~~~~~~l~~~~~~~---------------~------ 244 (354)
T PRK04635 189 EFCP-EYSVADLLASYPN-LVVLRTLSKAFALAGARCGFTLA-NEELIEILMRVIAPY---------------P------ 244 (354)
T ss_pred hhcc-CcchHHHHhhCCC-EEEEechHHHhhhhHHHHhhhhC-CHHHHHHHHhhcCCC---------------C------
Confidence 4321 1111111111111 14677999998744 34677766 443333221111111 0
Q ss_pred cchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 369 FRSLKLWFVLRLL---GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 369 ~~al~lw~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
.......+++..+ |.+.+++.+++..+..+++.+.|++.+++++..
T Consensus 245 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 293 (354)
T PRK04635 245 VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLE 293 (354)
T ss_pred CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECC
Confidence 0111112233333 234455666667777788899999886677653
No 230
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.47 E-value=6.2e-11 Score=124.63 Aligned_cols=237 Identities=11% Similarity=-0.019 Sum_probs=140.3
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
..++-+.+.+|+.+.+|.+-+. ....++|+|++++...++.+..+ + ++.+++....
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~------~~~ii~t~G~~~~i~~~~~~~~~----------~-------gd~Vl~~~P~y 127 (385)
T PRK09276 71 MLEFRKAVADWYKRRFGVELDP------ETEVISLIGSKEGIAHIPLAFVN----------P-------GDVVLVPDPGY 127 (385)
T ss_pred cHHHHHHHHHHHHHHhCCCCCC------CCcEEEccCcHHHHHHHHHHhCC----------C-------CCEEEEcCCCC
Confidence 4678888889998877764210 01356778888886554433211 0 2345554444
Q ss_pred chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcC
Q psy9807 206 TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKD 279 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~ 279 (561)
.....+++..|.+++.+|. . +..+|++++++.+.+ .+.+|+.+...+.||.+-+ +++|+++|++||
T Consensus 128 ~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~ 199 (385)
T PRK09276 128 PVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAK--------KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYD 199 (385)
T ss_pred cChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccc--------cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 4455567788999999998 3 355789999887755 4567777777888999876 588889999999
Q ss_pred ceEEechhcccccccCcccccc--ccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCC
Q psy9807 280 VWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAP 356 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (561)
+|+++|.+|+....-....... +.+...-..+..++.|.++.|. =+|.++. ++..+.. +.....++..
T Consensus 200 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~-~~~l~~~-~~~~~~~~~~------- 270 (385)
T PRK09276 200 IIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG-NADLIAG-LGKVKSNVDS------- 270 (385)
T ss_pred cEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC-CHHHHHH-HHHHHhhccC-------
Confidence 9999999997432211001111 1111112356788999887552 2666654 4443332 2111111100
Q ss_pred CCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 357 DYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 357 ~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
....+...++...+ ....+++..++..+..+++.+.|++. ++++..+
T Consensus 271 -----------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 319 (385)
T PRK09276 271 -----------GVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLEVEPP 319 (385)
T ss_pred -----------CCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC
Confidence 00111112222222 23445666667777788888988887 7766543
No 231
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.46 E-value=3.4e-11 Score=127.04 Aligned_cols=224 Identities=14% Similarity=0.051 Sum_probs=125.0
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TEL 208 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~ 208 (561)
..++.+.|+++.+.+ ..+|++|||+||..|+.+||...... . + .. ....+++..... -+.
T Consensus 84 ~~~l~~~l~~~~~~~-----------~~~~~~SGseA~e~Alk~a~~~~~~~-~--g--~~--~~r~~ii~~~~~~HG~~ 145 (396)
T PRK04073 84 LGPWYEKVAKLTGKD-----------MVLPMNTGAEAVETAIKAARRWAYDV-K--G--VE--PNKAEIIACEGNFHGRT 145 (396)
T ss_pred HHHHHHHHHhcCCCC-----------eEEEcCChHHHHHHHHHHHHHHhhhc-c--C--CC--CCCCEEEEECCCcCCCC
Confidence 334445556666543 45899999999999999998652111 0 0 00 001234444333 222
Q ss_pred HHHHHhccC------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHH
Q psy9807 209 EVVMLDWLG------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIG 272 (561)
Q Consensus 209 ~kaa~~~g~------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~ 272 (561)
.-+..+.+. .+..+| ..|+++|++.+.+ .+.+|+++...+.+|.+-| +++|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~i~~--------~~~~viiep~~~~~G~~~~~~~~l~~l~ 213 (396)
T PRK04073 146 MAAVSLSSEEEYKRGFGPMLPGIKKIP----YGDLEALKAAITP--------NTAAFLVEPIQGEAGINIPPEGFLKAAR 213 (396)
T ss_pred HHHHhhcCCcccccCCCCCCCCceEeC----CCCHHHHHHhccc--------CeEEEEEcCccCCCCCccCCHHHHHHHH
Confidence 223333221 122333 2378888888755 4678888888888998865 89999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
++|++||+++++|.+|.+.......+.....++ ..|.+++ .|.++.+ ...|.+..++ +.. ..+.... .
T Consensus 214 ~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~~~~~~-~i~-~~~~~~~----~-- 282 (396)
T PRK04073 214 ELCKEENVLFIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISCVAANR-DIL-GVFTPGS----H-- 282 (396)
T ss_pred HHHHHcCCEEEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceEEEEcH-HHH-hhhcCCC----C--
Confidence 999999999999999986422111010011122 3577765 6999876 4577776643 322 2221100 0
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
. .+. + ...+...+++..+....-..+.++..++.++|.+.|+++
T Consensus 283 -~-------~t~--~--~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l 326 (396)
T PRK04073 283 -G-------STF--G--GNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI 326 (396)
T ss_pred -C-------CCC--C--CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 0 000 0 122333333333321101234566677889999998875
No 232
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.46 E-value=7.3e-11 Score=124.05 Aligned_cols=263 Identities=13% Similarity=0.019 Sum_probs=151.3
Q ss_pred HHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q psy9807 103 PAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQR 182 (561)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~ 182 (561)
+.++..++....+ ....|.......++.+.+.+|+.+..|++-+ ....++|+|+++++..++.+....
T Consensus 45 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~-------~~~i~it~G~~~al~~~~~~~~~~---- 112 (384)
T PRK06348 45 ESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFK-------RNEIMATVGACHGMYLALQSILDP---- 112 (384)
T ss_pred HHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------hhhEEEcCChHHHHHHHHHHhcCC----
Confidence 3444444433322 2233444444467889999999887766432 136789999999876655543110
Q ss_pred HHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecC
Q psy9807 183 VKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLG 258 (561)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g 258 (561)
++++++.... .....++...|.+++.+|. +++.+|+++|++.+.+ .+.+|+.+..
T Consensus 113 -------------gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~p 171 (384)
T PRK06348 113 -------------GDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS--------KTKAIILNSP 171 (384)
T ss_pred -------------CCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc--------CccEEEEeCC
Confidence 2345554444 4566667778888888886 3456999999998865 3455666667
Q ss_pred CCCCccccC---HHHHHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCccccccc-cceeEEecC
Q psy9807 259 TTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVTF-DCSAMWLKD 332 (561)
Q Consensus 259 tt~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~ 332 (561)
.+.||.+-+ +++|.++|++||+++++|.+|+.... ....... +.+...-..+..++.|.++.|. -+|.+.. +
T Consensus 172 ~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~-~ 249 (384)
T PRK06348 172 NNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSF-YEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIA-P 249 (384)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHCCeEEEEeccccccee-CCCccchhhcCCCcCcEEEEecchhccCCccccceeeec-C
Confidence 788898864 78888899999999999999985432 1111110 1111112366779999998553 3566655 4
Q ss_pred hhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 333 PSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
..... .+.....+.. + . ...+...++...+ ...-++++.+...+..+++.+.|++.+++
T Consensus 250 ~~~~~-~~~~~~~~~~------------~---~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~ 310 (384)
T PRK06348 250 DYIIE-TAKIINEGIC------------F---S---APTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNL 310 (384)
T ss_pred HHHHH-HHHHHHHhcc------------C---C---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 33322 2211100000 0 0 0111111122222 22334455556666677888888887776
Q ss_pred EEeccccccc
Q psy9807 411 EVIYEVLMGL 420 (561)
Q Consensus 411 ~l~~~~~~~~ 420 (561)
++. +++.+.
T Consensus 311 ~~~-~p~gg~ 319 (384)
T PRK06348 311 SLH-PPKGSI 319 (384)
T ss_pred eec-cCCeeE
Confidence 654 344444
No 233
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.46 E-value=7.2e-11 Score=122.67 Aligned_cols=283 Identities=12% Similarity=0.092 Sum_probs=169.7
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka 211 (561)
++++.+++.++.+++ ..++|+|++++...++.+. . .+++++.... .....+
T Consensus 58 ~lr~~ia~~~~~~~~---------~i~it~Ga~~~l~~~~~~~-----~--------------~~~v~i~~P~y~~~~~~ 109 (354)
T PRK06358 58 ELRKRIASFEQLDLE---------NVILGNGATELIFNIVKVT-----K--------------PKKVLILAPTFAEYERA 109 (354)
T ss_pred HHHHHHHHHhCCChh---------hEEECCCHHHHHHHHHHHh-----C--------------CCcEEEecCChHHHHHH
Confidence 445555666677654 6789999988876554331 0 1234544444 445556
Q ss_pred HHhccCCeEEeeC-CC--CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEec
Q psy9807 212 MLDWLGKMLDLPK-EF--LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~--g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVD 285 (561)
++..|.+++.+|. .+ +.+| +.+.+.+.. .+.+|+.+...+.||.+-+ +.+|+++|++||+|+++|
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~--------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~D 180 (354)
T PRK06358 110 LKAFDAEIEYAELTEETNFAAN-EIVLEEIKE--------EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIID 180 (354)
T ss_pred HHHcCCeeEEEeCccccCCCcc-HHHHHhhcc--------CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEe
Confidence 6778899999998 33 4677 555554533 3556666777899998875 888888999999999999
Q ss_pred hhcccccccCccccccccCccccc--eeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccc
Q psy9807 286 AAYAGSAFICPENRYLMKGVELAD--SFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQ 362 (561)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aD--si~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (561)
.+|.-.. ..+.....+..+...+ .+..++.|.++.| .-+|.+...+.............|
T Consensus 181 e~Y~~~~-~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~~---------------- 243 (354)
T PRK06358 181 EAFMDFL-EENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPW---------------- 243 (354)
T ss_pred CcccccC-CCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC----------------
Confidence 9987432 2211111111121111 5678999999855 457777664443332221111111
Q ss_pred ccCcCCcchHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhH
Q psy9807 363 IPLGRRFRSLKLWFVLRLLGV-KYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKL 441 (561)
Q Consensus 363 ~~~sr~~~al~lw~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~ 441 (561)
....+..+++...+.. .-+.+.++...+..+.+.+.|++.+++++..+ ..+.+.+
T Consensus 244 -----~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~------------------ 299 (354)
T PRK06358 244 -----SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP-SVNFIFF------------------ 299 (354)
T ss_pred -----cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-cceEEEE------------------
Confidence 0122223333334432 23466677777788889999988878765543 3333222
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeEC-
Q psy9807 442 WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIR- 520 (561)
Q Consensus 442 w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~- 520 (561)
++.+ ..++.+.|.+.|..+..+....
T Consensus 300 -------------------------------------------------~~~~----~~~~~~~l~~~gI~v~~~~~f~~ 326 (354)
T PRK06358 300 -------------------------------------------------KLEK----PIDLRKELLKKGILIRSCSNYRG 326 (354)
T ss_pred -------------------------------------------------EcCc----hHHHHHHHHHCCeEEEECCCCCC
Confidence 2211 1467888888875555444332
Q ss_pred -CEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 521 -DVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 521 -g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+..++|+++. +.++.++++++++++.
T Consensus 327 ~~~~~iRls~~----~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 327 LDENYYRVAVK----SREDNKKLLKALEVIL 353 (354)
T ss_pred CCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 3468999965 4468999999997753
No 234
>PRK09265 aminotransferase AlaT; Validated
Probab=99.46 E-value=5.1e-11 Score=126.11 Aligned_cols=177 Identities=13% Similarity=-0.036 Sum_probs=111.0
Q ss_pred ccccChhhHHHHHHHHHHHHHhc--CCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKML--DLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 197 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~--g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~ 197 (561)
.|.......++-+.+.+|+.+.. +.++ ...++|+|+++++..++.+... + ++
T Consensus 67 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~---------~~i~~t~G~~~~l~~~~~~~~~----------~-------gd 120 (404)
T PRK09265 67 GYSDSKGLFSARKAIMQYYQQKGIPDVDV---------DDIYIGNGVSELIVMAMQALLN----------N-------GD 120 (404)
T ss_pred CCCCCCCcHHHHHHHHHHHhccCCCCCCc---------ccEEEeCChHHHHHHHHHHhCC----------C-------CC
Confidence 34333333566677777765432 3333 2578888888887655543210 0 23
Q ss_pred ceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHH
Q psy9807 198 NLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEE 270 (561)
Q Consensus 198 ~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~e 270 (561)
.+++.... ..+..++...|.+++.+++ +++.+|+++|++.+.+ .+.+|+.+..++.||.+-+ +++
T Consensus 121 ~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~P~NPtG~~~~~~~~~~ 192 (404)
T PRK09265 121 EVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP--------RTKAIVIINPNNPTGAVYSKELLEE 192 (404)
T ss_pred EEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc--------cceEEEEECCCCCCCcCCCHHHHHH
Confidence 45554444 4566666777888887876 2467999999998865 4667777788899999988 999
Q ss_pred HHHHHhhcCceEEechhcccccccCccccccccCcccccee-eecCCcccccccc-ceeEEe
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSF-NFNPHKWMLVTFD-CSAMWL 330 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi-~~~~HK~l~~P~g-~g~l~~ 330 (561)
|+++|++||+++++|.+|+....-.........-......+ ..++.|.++.|.- +|.++.
T Consensus 193 i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~ 254 (404)
T PRK09265 193 IVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVL 254 (404)
T ss_pred HHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEE
Confidence 99999999999999999874321111111111101111334 4567899976643 566665
No 235
>PRK08068 transaminase; Reviewed
Probab=99.46 E-value=9.3e-11 Score=123.46 Aligned_cols=254 Identities=9% Similarity=-0.021 Sum_probs=147.1
Q ss_pred HHHHHhhcccc-ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCC-CeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 107 ADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 107 ~~~l~~~~n~~-~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~-~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
.+.+...++.. ...|...+...++.+.+.+|+.+.+|.+-+ .. ..++|+||+++...++.+. ..
T Consensus 51 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~-------~~~~i~it~G~~~~l~~~~~~~----~~--- 116 (389)
T PRK08068 51 VEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLD-------PETEVAILFGGKAGLVELPQCL----MN--- 116 (389)
T ss_pred HHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCccEEEcCCcHHHHHHHHHHh----CC---
Confidence 44444444432 223433455678999999999887786422 12 4678888888765543331 10
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
+ ++.+++.... .....++...|++++.+|. + +..+|++++++.+.+ .+.+|+.+...+
T Consensus 117 ---~-------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~--------~~~~v~l~~P~N 178 (389)
T PRK08068 117 ---P-------GDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAE--------KAKLMYLNYPNN 178 (389)
T ss_pred ---C-------CCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccc--------cceEEEEECCCC
Confidence 0 2234444444 4555567788999999998 3 356889999988855 355666666678
Q ss_pred CCccccCH---HHHHHHHhhcCceEEechhcccccccCccccccccCc--cccceeeecCCccccccc-cceeEEecChh
Q psy9807 261 NCCAFDCL---EEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV--ELADSFNFNPHKWMLVTF-DCSAMWLKDPS 334 (561)
Q Consensus 261 ~tG~idpl---~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi--~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~ 334 (561)
.||.+-+. ++|+++|++||+++++|.+|+-...-........... ..-..+..++.|.++.|. =+|.++. ++.
T Consensus 179 PTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~ 257 (389)
T PRK08068 179 PTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NES 257 (389)
T ss_pred CCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHH
Confidence 89999766 5777789999999999999964321110110111111 112356779999997653 2566554 544
Q ss_pred hHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 335 WVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.+.........|... ..+....++...+ +...+++.+++..+..+++.+.|++. ++.+
T Consensus 258 l~~~l~~~~~~~~~~-------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~ 317 (389)
T PRK08068 258 VIEAINLLQDHLFVS-------------------LFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEV 317 (389)
T ss_pred HHHHHHHHHhhccCC-------------------CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence 433221111111000 0000011112222 23456667777777888888888876 6654
Q ss_pred e
Q psy9807 413 I 413 (561)
Q Consensus 413 ~ 413 (561)
.
T Consensus 318 ~ 318 (389)
T PRK08068 318 D 318 (389)
T ss_pred c
Confidence 4
No 236
>PRK08175 aminotransferase; Validated
Probab=99.46 E-value=1.4e-10 Score=122.28 Aligned_cols=257 Identities=11% Similarity=-0.017 Sum_probs=145.2
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++.+.+.+|+.+.+|++-+ .....++|+|++++....+.+... + ++++
T Consensus 62 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~------~~~~i~~t~G~~~~l~~~~~~~~~----------~-------gd~V 118 (395)
T PRK08175 62 GYSTSRGIPRLRRAISRWYQDRYDVDID------PESEAIVTIGSKEGLAHLMLATLD----------H-------GDTV 118 (395)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCcEEEccCcHHHHHHHHHHhCC----------C-------CCEE
Confidence 4444444678899999999988776421 001467888887876443322110 0 2344
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCH---HHHHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCL---EEIGQVC 275 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl---~eI~~ia 275 (561)
++.... ......+...|.+++.+|.+....++++|+++++. . ...+.+|+.+..++.||.+-+. ++|+++|
T Consensus 119 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~--~---~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a 193 (395)
T PRK08175 119 LVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRE--S---YPKPKMMILGFPSNPTAQCVELEFFEKVVALA 193 (395)
T ss_pred EEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhh--c---cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHH
Confidence 444444 34455567788899999984344568899888864 2 1145667777667889988776 7899999
Q ss_pred hhcCceEEechhcccccccCccccccccCcc-ccc--eeeecCCcccccccc-ceeEEecChhhHHHhhccCCCccccCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVE-LAD--SFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aD--si~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
++||+++++|.+|+.... .......+..+. ..| .+..++.|.++.|.- +|.+. .++..+.. +.....+...
T Consensus 194 ~~~~i~ii~De~y~~l~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~-~~~~l~~~-~~~~~~~~~~-- 268 (395)
T PRK08175 194 KRYDVLVVHDLAYADIVY-DGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMV-GNPELVSA-LARIKSYHDY-- 268 (395)
T ss_pred HHcCcEEEEecchHhhcc-CCCCCcchhcCCCcccCEEEEeeccccccCcchhheeee-CCHHHHHH-HHHHHhhccc--
Confidence 999999999999974321 111001111111 123 457899999987643 56554 35544332 2211111000
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeee
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 424 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~ 424 (561)
+ .+ ......+...+.. ....+++..+...+..+++.+.|++. ++.+..+.....+.++
T Consensus 269 ----------~--~~-~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~ 326 (395)
T PRK08175 269 ----------G--TF-TPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAK 326 (395)
T ss_pred ----------C--CC-cHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEE
Confidence 0 00 0111111111211 23345555666667778888888887 6665444444444443
No 237
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.46 E-value=7.6e-11 Score=123.09 Aligned_cols=237 Identities=11% Similarity=0.088 Sum_probs=135.7
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
.+|...++|+ ++++.+|.+ ..++|+|||+|...++.+.. + .+ ++++++.
T Consensus 29 ~g~~~~~~e~----~la~~~g~~-----------~~v~~~sgt~aL~~~l~al~---~------~p-------Gd~Viv~ 77 (376)
T TIGR02379 29 DGPFSRRCET----WLENRTGTK-----------KALLTPSCTAALEMAALLLD---I------QP-------GDEVIMP 77 (376)
T ss_pred CcHHHHHHHH----HHHHHhCCC-----------eEEEeCCHHHHHHHHHHHcC---C------CC-------cCEEEEC
Confidence 3565566665 556667764 46999999999766554420 0 00 2234443
Q ss_pred ccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC
Q psy9807 203 PAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD 279 (561)
Q Consensus 203 ~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~ 279 (561)
... .+...++...|++++.+++ . .+.+|+++|++++.+ ++.+|+.+ ..+|...|+++|.++|++||
T Consensus 78 ~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~--------~tk~Iip~---~~~G~~~d~~~I~~la~~~~ 146 (376)
T TIGR02379 78 SYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH--------RTKAIVPV---HYAGVACDMDTIMALANKHQ 146 (376)
T ss_pred CCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc--------CceEEEEe---CCCCCccCHHHHHHHHHHCC
Confidence 333 5566677778999999999 3 467999999998866 45566543 45789999999999999999
Q ss_pred ceEEechhcccccccCccccccccCccccceeeecCC--ccccccccceeEEecChhhHHHhhccC-CCccccCCC-CCC
Q psy9807 280 VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPH--KWMLVTFDCSAMWLKDPSWVVNAFNVD-PLYLKHDQQ-GSA 355 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~H--K~l~~P~g~g~l~~r~~~~l~~~~~~~-~~yl~~~~~-~~~ 355 (561)
+++++|+||+.+....... ...+ .|.-++|+| |.+..-...|++++.+++...+..... .+....... ...
T Consensus 147 i~vIeDaa~~~g~~~~~~~---~g~~--~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 221 (376)
T TIGR02379 147 LFVIEDAAQGVMSTYKGRA---LGSI--GHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEV 221 (376)
T ss_pred CEEEEECccccCCccCCcc---cCCC--CCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCC
Confidence 9999999998543222111 1111 244455554 555432246777777665444322110 000000000 000
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD 408 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 408 (561)
..+... ..+.+++.-.+-+++-.--...++++.++..+++++..+.|...+
T Consensus 222 ~~~~~~--~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~ 272 (376)
T TIGR02379 222 DKYTWR--DIGSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLE 272 (376)
T ss_pred Ccceee--eecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCC
Confidence 000000 011122211111222222245577788888889999999988764
No 238
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.45 E-value=7e-11 Score=128.86 Aligned_cols=178 Identities=10% Similarity=-0.065 Sum_probs=116.3
Q ss_pred ccccChhhHHHHHHHHHHHHHhcC--CCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLD--LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 197 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g--~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~ 197 (561)
.|.......++-+.+.+++.+..+ +.+ ...++|+|++++...++.+..+ + ++
T Consensus 180 ~Y~~~~G~~~lReaia~~~~~~~~~~~~~---------~~I~it~G~~eal~~~~~~l~~----------~-------Gd 233 (517)
T PRK13355 180 GYSDSKGLFSARKAIMQYAQLKGLPNVDV---------DDIYTGNGVSELINLSMSALLD----------D-------GD 233 (517)
T ss_pred CCCCCcChHHHHHHHHHHHHhcCCCCCCh---------hHEEEeCcHHHHHHHHHHHhCC----------C-------CC
Confidence 354444456777888888765433 333 2678899999887666544211 0 23
Q ss_pred ceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHH
Q psy9807 198 NLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEE 270 (561)
Q Consensus 198 ~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~e 270 (561)
++++.... ......+.+.|++++.+++ . ++.+|+++|++++.+ ++.+|+++..++.||.+-+ +++
T Consensus 234 ~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~--------~~k~i~i~nP~NPTG~v~~~~~l~~ 305 (517)
T PRK13355 234 EVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITS--------RTKAIVIINPNNPTGALYPREVLQQ 305 (517)
T ss_pred EEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCc--------CceEEEEECCCCCCCcCcCHHHHHH
Confidence 45555555 4555667788999998887 3 468999999998865 4667777788999999977 899
Q ss_pred HHHHHhhcCceEEechhcccccccCccccccccCccccceee-ecCCccccccc-cceeEEec
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFN-FNPHKWMLVTF-DCSAMWLK 331 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~-~~~HK~l~~P~-g~g~l~~r 331 (561)
|+++|++||+++++|.+|.-...-...+.....-....-.++ .++.|.++.|. =+|.+++.
T Consensus 306 i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~ 368 (517)
T PRK13355 306 IVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILS 368 (517)
T ss_pred HHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEee
Confidence 999999999999999999743211111111111111111333 57899886653 36777753
No 239
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.45 E-value=9.9e-11 Score=123.05 Aligned_cols=228 Identities=11% Similarity=-0.008 Sum_probs=136.6
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
.++.+.++.+++++..+.+ ..+|++|||+||..|+..||.... + ..+ ...+++.+...
T Consensus 76 ~~~~~~~la~~l~~~~~~~-----------~v~f~~SGseA~e~Aik~ar~~~~-~---~~~------~r~~ii~~~~~y 134 (395)
T PRK03715 76 YNEPMAKLAGLLTQHSCFD-----------KVFFANSGAEANEGAIKLARKWGR-K---HKN------GAYEIITFDHSF 134 (395)
T ss_pred cCHHHHHHHHHHhhccCCC-----------EEEEeCCcHHHHHHHHHHHHHHhh-c---cCC------CCcEEEEECCCc
Confidence 3567788888888765432 469999999999999999986421 1 000 01245554433
Q ss_pred -chHHHHHHhccCCe---EEeeC-CC----CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHH
Q psy9807 206 -TELEVVMLDWLGKM---LDLPK-EF----LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIG 272 (561)
Q Consensus 206 -~s~~kaa~~~g~~v---~~v~~-~~----g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~ 272 (561)
-+..-++.+.+... ...|. .. ...|+++|++.+.+ .+.+|++.....+.|.+-| +++|.
T Consensus 135 HG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~aavi~Epv~~~gG~~~~~~~~l~~l~ 206 (395)
T PRK03715 135 HGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD--------KTVAVMLEPVQGEGGVIPATREFMQQLR 206 (395)
T ss_pred CCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC--------CceEEEEeCCcCCCCCccCCHHHHHHHH
Confidence 33333444444221 11111 11 13578888888854 4567888888888898887 99999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQ 352 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 352 (561)
++|++||+++++|.++.|......-+..-..++ ..|.+++ .|.++.-+..|+++.++.-. .+. +.+..
T Consensus 207 ~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv-~PDi~t~--gK~lg~G~p~~av~~~~~i~---~~~--~~~~~---- 274 (395)
T PRK03715 207 ALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGI-EPDIMTL--GKGIGGGVPLAALLAKAEVA---VFE--AGDQG---- 274 (395)
T ss_pred HHHHHcCCEEEEeccccCCCCCcchhhHhhcCC-CCceeee--hhhhhCCcceEEEEEccccc---ccc--CCCcC----
Confidence 999999999999999986422221111111233 3687766 59998766678887765421 111 11100
Q ss_pred CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 353 GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 353 ~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
. +. .+-+..+....++++.+.. ++++++..++.++|++.|+++
T Consensus 275 -~-------T~-~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l 317 (395)
T PRK03715 275 -G-------TY-NGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLEL 317 (395)
T ss_pred -C-------CC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0111222333444555532 456778888889999888754
No 240
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.44 E-value=1.1e-10 Score=122.06 Aligned_cols=293 Identities=10% Similarity=-0.027 Sum_probs=175.0
Q ss_pred hhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc
Q psy9807 125 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA 204 (561)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s 204 (561)
+...++.+.+.+|+.+..|.+-+ ....++|+|++++...++.+..+. ++.+++...
T Consensus 65 ~g~~~lr~aia~~~~~~~~~~~~-------~~~I~it~G~~~~l~~~~~~~~~~-----------------gd~v~v~~P 120 (368)
T PRK03317 65 RDAVALRADLAAYLTAQTGVGLT-------VENVWAANGSNEILQQLLQAFGGP-----------------GRTALGFVP 120 (368)
T ss_pred CchHHHHHHHHHHhhhhccCCCC-------hhhEEECCCHHHHHHHHHHHhcCC-----------------CCEEEEeCC
Confidence 44567888888999888776422 125778888888775555442110 224455444
Q ss_pred c-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceE
Q psy9807 205 C-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWL 282 (561)
Q Consensus 205 ~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~l 282 (561)
. .....++...|.+++.+|. +++.+|+++|++++.+ . .+.+|+.+.-.+.||.+-+.+++.++|+.+++++
T Consensus 121 ~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~--~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~l 193 (368)
T PRK03317 121 SYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAE--H-----RPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIV 193 (368)
T ss_pred ChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhc--c-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceE
Confidence 4 3445556777888888887 6789999999999865 2 3445666677788999999999999999999999
Q ss_pred EechhcccccccCccccccccCcc-ccc-eeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCC
Q psy9807 283 HVDAAYAGSAFICPENRYLMKGVE-LAD-SFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYR 359 (561)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~-~aD-si~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (561)
++|.+|+.... ... ........ ..+ .+..++.|.++.|. -+|.++. ++............|-
T Consensus 194 I~DE~y~~~~~-~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~-~~~~~~~l~~~~~~~~------------ 258 (368)
T PRK03317 194 VVDEAYAEFRR-SGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAA-APAVVDALRLVRLPYH------------ 258 (368)
T ss_pred EEeCCchhhcc-cCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhC-CHHHHHHHHhcCCCCC------------
Confidence 99999985321 110 11111111 113 45559999997552 3455554 4433332211111110
Q ss_pred cccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccch
Q psy9807 360 HWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRS 438 (561)
Q Consensus 360 ~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~ 438 (561)
...+...++...+. .+.+.+.+++..+..+++.+.|++. |+++.. +..+.+.|.
T Consensus 259 ---------~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~-------------- 313 (368)
T PRK03317 259 ---------LSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVAP-SDANFVLFG-------------- 313 (368)
T ss_pred ---------CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCC-CCCcEEEEe--------------
Confidence 11122222222221 2334455555666677778888776 666543 333432220
Q ss_pred hhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeee
Q psy9807 439 LKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSK 518 (561)
Q Consensus 439 ~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 518 (561)
.. . ...++.+.|.++|..+ .+..
T Consensus 314 ----------------------------------------------------~~-~---~~~~~~~~l~~~Gv~v-~~~~ 336 (368)
T PRK03317 314 ----------------------------------------------------RF-A---DRHAVWQGLLDRGVLI-RDVG 336 (368)
T ss_pred ----------------------------------------------------cc-C---CHHHHHHHHHHCCEEE-EeCC
Confidence 00 0 1246778888887544 3322
Q ss_pred ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 519 IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 519 ~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
...++|++++ +.+++++++++++++.+
T Consensus 337 --~~~~iRi~~~----~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 337 --IPGWLRVTIG----TPEENDAFLAALAEVLA 363 (368)
T ss_pred --CCCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 2458999854 45789999999988754
No 241
>PRK09105 putative aminotransferase; Provisional
Probab=99.43 E-value=1.1e-10 Score=121.83 Aligned_cols=281 Identities=11% Similarity=-0.038 Sum_probs=170.8
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++++.+++.+|++++ ..++|+|++++...++.+..+. ++++++.... .....
T Consensus 81 ~~Lr~aia~~~~v~~e---------~I~it~Gs~~ai~~~~~~l~~~-----------------gd~Vli~~P~y~~~~~ 134 (370)
T PRK09105 81 DDLRTLFAAQEGLPAD---------HVMAYAGSSEPLNYAVLAFTSP-----------------TAGLVTADPTYEAGWR 134 (370)
T ss_pred HHHHHHHHHHhCcChh---------hEEEcCChHHHHHHHHHHHcCC-----------------CCEEEEeCCChHHHHH
Confidence 3455566778888765 6789999999876665442110 2345555544 44566
Q ss_pred HHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh--cCceEEechh
Q psy9807 211 VMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ--KDVWLHVDAA 287 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~--~~~~lhVDaA 287 (561)
.++..|.+++.+|. .++.+|++.+++.. + ++.+|+.+..++.||.+-+.++|.++++. +++|+++|.+
T Consensus 135 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~--------~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEa 205 (370)
T PRK09105 135 AADAQGAPVAKVPLRADGAHDVKAMLAAD-P--------NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEA 205 (370)
T ss_pred HHHHcCCeEEEecCCCCCCCCHHHHHhcC-C--------CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECc
Confidence 67888999999998 77889999987652 2 24567777889999999999999888754 4899999999
Q ss_pred cccccccCccccccccCccccceee-ecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccC
Q psy9807 288 YAGSAFICPENRYLMKGVELADSFN-FNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPL 365 (561)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~-~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (561)
|.... ..+....... ...+.++ .+++|.++.|. -+|.++. +...+...... ..+
T Consensus 206 Y~~f~-~~~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~~i~~l~~~-~~~------------------- 261 (370)
T PRK09105 206 YIHFS-DAPSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGLAAA-RPDLLAKLARF-GHN------------------- 261 (370)
T ss_pred hHHhc-cCcchHHHHh--hCCCEEEEecccHhhcCCccceeeeec-CHHHHHHHHhc-CCC-------------------
Confidence 85321 1111111100 1224444 57889887542 3676665 44443322111 000
Q ss_pred cCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHH
Q psy9807 366 GRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFV 444 (561)
Q Consensus 366 sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~ 444 (561)
+ ......+++...+. ...+++..++..+..+++.+.|++. ++++.. +..+.+.++
T Consensus 262 ~--~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~-~~~~f~~~~-------------------- 317 (370)
T PRK09105 262 P--LPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCTP-SQANCFMVD-------------------- 317 (370)
T ss_pred C--cCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcCC-CCCcEEEEe--------------------
Confidence 0 11222333344443 3345666677778888888888886 776543 334432221
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEE
Q psy9807 445 LRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYF 524 (561)
Q Consensus 445 ~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~ 524 (561)
.. .+ ..++.+.|.+.|... .........+
T Consensus 318 -----------------------------------------------~~-~~--~~~l~~~L~~~gI~v-~~~~~~~~~~ 346 (370)
T PRK09105 318 -----------------------------------------------VK-RP--AKAVADAMAKQGVFI-GRSWPIWPNW 346 (370)
T ss_pred -----------------------------------------------CC-CC--HHHHHHHHHHCCcEE-ecCCCCCCCe
Confidence 11 11 246788888886544 2111122568
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 525 LRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 525 lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+|++++ +++++++++++|+++.
T Consensus 347 ~Ris~~----~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 347 VRVTVG----SEEEMAAFRSAFAKVM 368 (370)
T ss_pred EEEEcC----CHHHHHHHHHHHHHHh
Confidence 999966 4578999999998753
No 242
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.43 E-value=4e-11 Score=125.41 Aligned_cols=223 Identities=9% Similarity=-0.001 Sum_probs=135.8
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka 211 (561)
.+++++++.+|.+++ ..++|+|++++....+.+. .. . ++.+++.... ......
T Consensus 75 ~lr~~ia~~~~~~~~---------~i~~t~G~~~~l~~~~~~~----~~----~---------gd~vli~~P~y~~~~~~ 128 (371)
T PRK05166 75 ALREAIAARTGVPAD---------RIILGNGSEDLIAVICRAV----LR----P---------GDRVVTLYPSFPLHEDY 128 (371)
T ss_pred HHHHHHHHHhCcCHH---------HEEEcCCHHHHHHHHHHHh----cC----C---------CCEEEEcCCChHHHHHH
Confidence 466677888888654 5788998888764443321 10 0 1244444444 344556
Q ss_pred HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh--cCceEEechhc
Q psy9807 212 MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ--KDVWLHVDAAY 288 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~--~~~~lhVDaA~ 288 (561)
++..|.+++.+|. .++.+|+++|++.+.+ .+.+|+.+...+.||.+-|.+++.++++. +++++++|.+|
T Consensus 129 ~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y 200 (371)
T PRK05166 129 PTMMGARVERVTVTPDLGFDLDALCAAVAR--------APRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAY 200 (371)
T ss_pred HHHcCCeEEEeecCCCCCCCHHHHHHhhhc--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcH
Confidence 6778999999999 6789999999998866 45667778889999999988777777654 48899999998
Q ss_pred ccccccCccccccccCcc-c--cceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccccc
Q psy9807 289 AGSAFICPENRYLMKGVE-L--ADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIP 364 (561)
Q Consensus 289 gg~~~~~~~~~~~~~gi~-~--aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (561)
+-.. ........+..+. . --.+..++.|.++.|. -.|.+++.+.............| .
T Consensus 201 ~~~~-~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~-~---------------- 262 (371)
T PRK05166 201 AEYA-AGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTPF-N---------------- 262 (371)
T ss_pred HHhc-CCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccCC-C----------------
Confidence 7543 2111111111111 1 1256788999998553 46666665554333221111111 0
Q ss_pred CcCCcchHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 365 LGRRFRSLKLWFVLRLL-GVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 365 ~sr~~~al~lw~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
...+...+++..+ ....+++.++...+..+++.+.|++. ++.+
T Consensus 263 ----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~ 306 (371)
T PRK05166 263 ----VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRI 306 (371)
T ss_pred ----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCee
Confidence 0111111122222 23446666667777778888888887 6664
No 243
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.43 E-value=1.4e-10 Score=121.72 Aligned_cols=227 Identities=15% Similarity=0.027 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccc--
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACT-- 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~-- 206 (561)
....++.+++++++|.+ ..+++.||++||..++.+++...... ++ ..+++++....|
T Consensus 69 ~~~~~l~~~la~~~g~~-----------~~~~~~sg~~a~~~a~~~~~~~~~~~----~~------~~~~vi~~~~~yh~ 127 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD-----------RVFFCNSGAEANEAALKLARKYTGDK----GK------EKKKIIAFENSFHG 127 (379)
T ss_pred HHHHHHHHHHHhhCCCC-----------EEEEeCCcHHHHHHHHHHHHHHhhcc----CC------CCCeEEEECCCcCC
Confidence 34555666778888875 36899999999999998776432100 00 012344333221
Q ss_pred hHHHHHHhccCCe---EEeeC-CCC----ccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc----cCHHHHHHH
Q psy9807 207 ELEVVMLDWLGKM---LDLPK-EFL----ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF----DCLEEIGQV 274 (561)
Q Consensus 207 s~~kaa~~~g~~v---~~v~~-~~g----~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i----dpl~eI~~i 274 (561)
+...+....+... ...+. .+. ..|+++|++.+.+ .+.+|+.+...+.+|.+ +++++|.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l 199 (379)
T TIGR00707 128 RTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD--------ETAAVIVEPIQGEGGVNPASAEFLKALREI 199 (379)
T ss_pred ccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh--------CeeEEEEEccccCCCCccCCHHHHHHHHHH
Confidence 1111211111111 11222 111 2289999998865 45667777666666654 248999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
|++||+++++|.+|.+.............++ ..|.+ +++|.++.....|.++.. .+.+. .+.... + .
T Consensus 200 ~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~-~~d~~--t~sK~~~~G~riG~~~~~-~~~~~-~~~~~~-~------~- 266 (379)
T TIGR00707 200 CKDKDALLIFDEVQTGIGRTGKFFAYEHYGI-EPDII--TLAKGLGGGVPIGATLAK-EEVAE-AFTPGD-H------G- 266 (379)
T ss_pred HHHcCCEEEEeccccCCCccchhhhHHhcCC-CCCEE--EEcccccCCcccEEEEEc-HHHHh-hhcCCC-C------C-
Confidence 9999999999999975321111000001122 23655 468999965678887764 33332 222100 0 0
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
..+ ..-.+....++.+++.+.. .++.++..++.+++++.+++.
T Consensus 267 ----~~~---~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~ 309 (379)
T TIGR00707 267 ----STF---GGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEEL 309 (379)
T ss_pred ----CCC---CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH
Confidence 000 0111233344445554432 245567777888888888764
No 244
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.43 E-value=2.4e-10 Score=121.49 Aligned_cols=308 Identities=12% Similarity=0.016 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE 207 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s 207 (561)
+.+.++.+.|.+++.-.- ....|++|||+||..|+..||.....+ + .+ ...+++.+... +-
T Consensus 85 ~~~~~la~~l~~~~p~~~---------~~v~f~~sGseA~e~A~klar~~~~~~-~--~~------~r~~ii~~~~~yHG 146 (423)
T PRK05964 85 EPAERLAQRLVALTPGGL---------DHVFFSDSGSVAVEVALKMALQYWRNR-G--EP------GRSRFLSLRGGYHG 146 (423)
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEeCCcHHHHHHHHHHHHHHHHhc-C--CC------CCcEEEEEcCCcCC
Confidence 455566777777763111 146899999999999999999763221 0 00 01244444433 11
Q ss_pred HHHHH-Hhcc------------CCeEEeeCC--C-CccChhhHHHHHhhhchhhcCCceEEEEEec-CCCCCcccc----
Q psy9807 208 LEVVM-LDWL------------GKMLDLPKE--F-LACSGGKGGGVIQRKSDREMCSDLLQVVATL-GTTNCCAFD---- 266 (561)
Q Consensus 208 ~~kaa-~~~g------------~~v~~v~~~--~-g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~-gtt~tG~id---- 266 (561)
...++ .+.+ ..+..+|.. + ...++++|++.|.+ . +..+.+|++.- .....|.+-
T Consensus 147 ~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~--~---~~~iaavi~Ep~i~~~gG~~~~~~~ 221 (423)
T PRK05964 147 DTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEK--H---AGEIAAFIVEPLVQGAGGMLFYDPR 221 (423)
T ss_pred ccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHh--C---CCcEEEEEEecccccCCCcccCCHH
Confidence 11111 1111 123344431 1 12237788888865 2 22455566654 344455444
Q ss_pred CHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccC--
Q psy9807 267 CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVD-- 343 (561)
Q Consensus 267 pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~-- 343 (561)
.+++|.++|++||+++++|.+|.|......-+.....++ ..|.+++ .|+++.. +..|+++.++ +.. ..+...
T Consensus 222 ~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v-~pDi~~~--~K~l~gG~~p~~av~~~~-~i~-~~~~~~~~ 296 (423)
T PRK05964 222 YLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGV-SPDIMCL--SKGLTGGYLPLAATLCTA-EIF-EAFYSDDR 296 (423)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCC-CCCeeee--ehhhhcCcccceEEEEcH-HHH-HhhhcCCc
Confidence 499999999999999999999876432221111011223 3587765 5999877 5678776643 322 222211
Q ss_pred -CCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc--cccc
Q psy9807 344 -PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV--LMGL 420 (561)
Q Consensus 344 -~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~--~~~~ 420 (561)
..++. ..+-....+.+.+++..+..-.-+.+.++..++.+++.+.|++..++..+.+. ...+
T Consensus 297 ~~~~~~---------------~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~ 361 (423)
T PRK05964 297 AKAFMH---------------SPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAI 361 (423)
T ss_pred cccccc---------------CCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEE
Confidence 01110 01111233333333333322111346678888889999988875333222111 1111
Q ss_pred eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCc--HH
Q psy9807 421 VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPN--EI 498 (561)
Q Consensus 421 v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~--~~ 498 (561)
+.+ .+.+.. ..
T Consensus 362 ~~i-------------------------------------------------------------------~l~~~~~~~~ 374 (423)
T PRK05964 362 GAV-------------------------------------------------------------------ELDRPVLERD 374 (423)
T ss_pred EEE-------------------------------------------------------------------EeccCcchhH
Confidence 122 111111 23
Q ss_pred HHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 499 NEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 499 ~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
...+.+.|.+.|.+. .+. + ..+|++.. ...|++|||+++++++++.++
T Consensus 375 ~~~l~~~l~~~Gv~v-~~~---~-~~lR~~p~-l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 375 GPALRAFALERGVLL-RPL---G-NTIYLMPP-YIITAEELDRITDAIVEVADE 422 (423)
T ss_pred HHHHHHHHHHCCeEE-Eec---C-CEEEEeCC-cccCHHHHHHHHHHHHHHHhh
Confidence 457888888888544 332 2 37999844 566889999999999988765
No 245
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.43 E-value=6.2e-11 Score=123.60 Aligned_cols=281 Identities=10% Similarity=-0.009 Sum_probs=167.8
Q ss_pred HHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHH
Q psy9807 134 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVM 212 (561)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa 212 (561)
+++.+++.+|.+++ ..++|+|+++++..++.+..+. ++.+++.... ......+
T Consensus 69 Lr~aia~~~~~~~~---------~I~vt~Gs~e~i~~~~~~l~~~-----------------gd~vlv~~P~y~~~~~~~ 122 (366)
T PRK01533 69 LRQTIANKLHVKME---------QVLCGSGLDEVIQIISRAVLKA-----------------GDNIVTAGATFPQYRHHA 122 (366)
T ss_pred HHHHHHHHhCCCcc---------eEEECCCHHHHHHHHHHHhcCC-----------------CCEEEEcCCcHHHHHHHH
Confidence 45556666788764 6789999999876655442110 1234444444 4455567
Q ss_pred HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH---hhcCceEEechhcc
Q psy9807 213 LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC---RQKDVWLHVDAAYA 289 (561)
Q Consensus 213 ~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia---~~~~~~lhVDaA~g 289 (561)
...|.+++.+|.+++.+|+++|++++.+ .+.+|+++...+.||.+-+.+++.+++ ++++ ++++|.+|.
T Consensus 123 ~~~g~~v~~v~~~~~~~d~~~l~~~~~~--------~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~ 193 (366)
T PRK01533 123 IIEGCEVKEVALNNGVYDLDEISSVVDN--------DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYY 193 (366)
T ss_pred HHcCCEEEEeecCCCCcCHHHHHHHhCc--------CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHH
Confidence 7889999999985567999999998865 355677778899999998866665554 4555 677899986
Q ss_pred cccccCccccccccCccc--cceeeecCCcccccccc-ceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 290 GSAFICPENRYLMKGVEL--ADSFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 290 g~~~~~~~~~~~~~gi~~--aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
... ........+..++. --.+..++.|.++.|.- +|.++. ++..+.........|
T Consensus 194 ~~~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~-~~~~~~~l~~~~~~~-------------------- 251 (366)
T PRK01533 194 EYV-TAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG-HEELIEKLNVVRLPF-------------------- 251 (366)
T ss_pred Hhh-ccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC-CHHHHHHHHHhcCCC--------------------
Confidence 322 11111111111111 13677899999986643 455443 444333221111111
Q ss_pred CCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHH
Q psy9807 367 RRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVL 445 (561)
Q Consensus 367 r~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~ 445 (561)
....+...++...+. .+..++..+...+..+++.+.++.. ++++.. +..+-+.+
T Consensus 252 -~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~-~~~nf~~~---------------------- 306 (366)
T PRK01533 252 -NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFYQ-SQTNFIFL---------------------- 306 (366)
T ss_pred -CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccCC-CcCcEEEE----------------------
Confidence 012333344444443 2334455555666677777777776 666543 34443332
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEE
Q psy9807 446 RLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFL 525 (561)
Q Consensus 446 ~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~l 525 (561)
+.. + ..++.+.|.+.|..+... ..++
T Consensus 307 ---------------------------------------------~~~--~--~~~~~~~l~~~GI~Vr~~-----~~~i 332 (366)
T PRK01533 307 ---------------------------------------------PVE--N--GGEIYEACAHAGFIIRPF-----PNGV 332 (366)
T ss_pred ---------------------------------------------eCC--C--HHHHHHHHHHCCcEEccC-----CCce
Confidence 221 1 246788888888665431 2479
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 526 RMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 526 R~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
|+++. +.++.++++++|+++.+...
T Consensus 333 Ris~~----~~~~~~~l~~al~~~~~~~~ 357 (366)
T PRK01533 333 RITVG----TREQNEGVISVLQQHFENKK 357 (366)
T ss_pred EEeCC----CHHHHHHHHHHHHHHHHhcc
Confidence 99966 45799999999988765443
No 246
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.43 E-value=3.4e-11 Score=123.85 Aligned_cols=254 Identities=9% Similarity=-0.040 Sum_probs=142.2
Q ss_pred cccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc
Q psy9807 117 IGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII 196 (561)
Q Consensus 117 ~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~ 196 (561)
.-..|..+|...+||+.+ +++||++ .+++|.+|++++..+..+.... .+.++ +..
T Consensus 66 GDD~Y~gdpSv~~Lee~v----ael~G~E-----------~alpthqGRgaE~Il~~~~~~~-------~g~e~---g~~ 120 (467)
T TIGR02617 66 GDEAYSGSRSYYALAESV----KNIFGYQ-----------YTIPTHQGRGAEQIYIPVLIKK-------REQEK---GLD 120 (467)
T ss_pred CCcccccCchHHHHHHHH----HHHhCCc-----------eEEECCCCchHHHHHHHhhccc-------ccccc---ccc
Confidence 445799999999999977 6677886 3589999999998776543221 00000 000
Q ss_pred c-c-eEEecccchHHH-HHHhccCCeEEee----------C-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC
Q psy9807 197 A-N-LIASPACTELEV-VMLDWLGKMLDLP----------K-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC 262 (561)
Q Consensus 197 ~-~-~vv~~s~~s~~k-aa~~~g~~v~~v~----------~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t 262 (561)
. + ++.....+.-.+ .+.+.|+.++.++ . .+|.+|+++|++.|++ ... ...++.......++.-
T Consensus 121 ~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~--~g~-~~i~~v~~tlt~N~~G 197 (467)
T TIGR02617 121 RSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEE--VGP-NNVPYIVATITCNSAG 197 (467)
T ss_pred ccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhh--cCC-CCceeeeeeEEEecCC
Confidence 0 1 111111133223 3467787766652 2 4689999999999986 311 1123222221112223
Q ss_pred ccc---cCHHHHHHHHhhcCceEEechhcccc-cccC---------cccccccc-CccccceeeecCCccccccccceeE
Q psy9807 263 CAF---DCLEEIGQVCRQKDVWLHVDAAYAGS-AFIC---------PENRYLMK-GVELADSFNFNPHKWMLVTFDCSAM 328 (561)
Q Consensus 263 G~i---dpl~eI~~ia~~~~~~lhVDaA~gg~-~~~~---------~~~~~~~~-gi~~aDsi~~~~HK~l~~P~g~g~l 328 (561)
|.. +.++++.++|++||+.+|+|||--.. +.+. -..+.... -...+|++++|+.|.+++|.|+ ++
T Consensus 198 Gqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvGg-~L 276 (467)
T TIGR02617 198 GQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMGG-LL 276 (467)
T ss_pred CEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcccc-eE
Confidence 544 67788888999999999999984331 2211 11111111 1256799999999999999864 44
Q ss_pred EecCh---hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy9807 329 WLKDP---SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVR 405 (561)
Q Consensus 329 ~~r~~---~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~ 405 (561)
..++. +...+.-.....| .+.+.|+. -.+|-..++++ .|. ..--...+++.....+||.+.|.
T Consensus 277 ag~d~~~~~l~~~~~~~~i~~------EGf~tYGG---lagrd~ea~a~--Gl~---e~~~~~yl~~ri~qv~yl~~~L~ 342 (467)
T TIGR02617 277 CFKDDSFFDVYTECRTLCVVQ------EGFPTYGG---LEGGAMERLAV--GLY---DGMNLDWLAYRINQVQYLVNGLE 342 (467)
T ss_pred EecchhHHHHHHHHHhhcccc------cCCcCcCc---hhHHHHHHHHh--hhh---hcccHHHHHHHHHHHHHHHHHHH
Confidence 44555 3333322212221 01111211 01232233321 111 11234567777888999999999
Q ss_pred cCCCeEEec
Q psy9807 406 SDDRFEVIY 414 (561)
Q Consensus 406 ~~~g~~l~~ 414 (561)
+. |+.+..
T Consensus 343 ~~-Gvpi~~ 350 (467)
T TIGR02617 343 EI-GVVCQQ 350 (467)
T ss_pred hC-CCcEEe
Confidence 87 887765
No 247
>PLN02624 ornithine-delta-aminotransferase
Probab=99.42 E-value=4.3e-10 Score=120.95 Aligned_cols=171 Identities=13% Similarity=0.014 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc----
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---- 205 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---- 205 (561)
...++.+.+++++|++ ..+|++|||+||..|+..||.+.... .+ .. .....++..+.
T Consensus 118 ~~~~la~~L~~~~~~~-----------~~~f~~SGseA~e~AlklAr~~~~~~---~g--~~---~~~~~ii~~~~~yHG 178 (474)
T PLN02624 118 KFPEFAEYLTSMFGYD-----------MVLPMNTGAEGVETAIKLARKWGYEK---KG--IP---KNEAIIVSCCGCFHG 178 (474)
T ss_pred HHHHHHHHHHhhcCCC-----------eEEEeCChHHHHHHHHHHHHHHHHhh---cC--CC---CCCcEEEEECCCcCC
Confidence 3344445556666654 45899999999999999998752211 00 00 01123344333
Q ss_pred chHHHHHHhccC------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HH
Q psy9807 206 TELEVVMLDWLG------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LE 269 (561)
Q Consensus 206 ~s~~kaa~~~g~------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~ 269 (561)
.+... ..+.+. .+..+| ..|++.|++.++. . +....+|++....+.+|.+-| |+
T Consensus 179 ~t~~~-~s~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~l~~--~---~~~iaaiiiEpv~~~~G~v~p~~~~L~ 248 (474)
T PLN02624 179 RTLAA-ISMSCDNEATRGFGPLLPGHLKVD----FGDLDALEKIFEE--D---GDRIAAFLFEPIQGEAGVVIPPDGYLK 248 (474)
T ss_pred CCHHH-hhcCCCccccccCCCCCCCceEeC----CCCHHHHHHHHHh--C---CCCEEEEEECCccCCCCCcCCCHHHHH
Confidence 11111 111111 122333 2478899988864 2 235678888888888999887 99
Q ss_pred HHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecC
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKD 332 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~ 332 (561)
+|.++|++||+++++|.+|.|.......+.....++ ..|.+++ .|.++.. ..+|.++.++
T Consensus 249 ~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~l--sK~lggG~~pigav~~~~ 309 (474)
T PLN02624 249 AVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEV-RPDVVIL--GKALGGGVIPVSAVLADK 309 (474)
T ss_pred HHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCC-CCCEEEe--cccccCCCCcceeeeecH
Confidence 999999999999999999986322111111111233 4587886 5998876 4677777643
No 248
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.42 E-value=1.1e-10 Score=122.11 Aligned_cols=290 Identities=10% Similarity=0.010 Sum_probs=166.4
Q ss_pred HHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHH
Q psy9807 134 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVM 212 (561)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa 212 (561)
+++.+++.+|.+++ ..++|+|++++...++.+..+ + ++.+++.... ..+...+
T Consensus 72 Lr~~ia~~~~~~~~---------~I~it~G~~~~l~~~~~~~~~----------~-------gd~vlv~~p~y~~~~~~~ 125 (369)
T PRK08153 72 LRHALAAHHGVAPE---------NIMVGEGIDGLLGLIVRLYVE----------P-------GDPVVTSLGAYPTFNYHV 125 (369)
T ss_pred HHHHHHHHhCCCHH---------HEEEcCCHHHHHHHHHHHhcC----------C-------CCEEEECCCcchHHHHHH
Confidence 34444555677654 567777777765443332110 0 1233333333 3455556
Q ss_pred HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc--CceEEechhccc
Q psy9807 213 LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK--DVWLHVDAAYAG 290 (561)
Q Consensus 213 ~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~--~~~lhVDaA~gg 290 (561)
...|.+++.+|.++..+|++++.+.+.. . .+.+++.+...+.||.+-|.+++.++++.+ |+|+++|.+|+.
T Consensus 126 ~~~g~~~~~vp~~~~~~~~~~l~~~~~~--~-----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~ 198 (369)
T PRK08153 126 AGFGGRLVTVPYRDDREDLDALLDAARR--E-----NAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCE 198 (369)
T ss_pred HHcCCeEEEeeCCCCCCCHHHHHHHhcc--c-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhh
Confidence 6778899999983335888888776643 1 345666677788899999988888877654 899999999874
Q ss_pred ccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc
Q psy9807 291 SAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF 369 (561)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~ 369 (561)
... ...... +.....--.+..++.|.++.|. -+|.++. +.+.+.........| ..
T Consensus 199 ~~~-~~~~~~-~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~-~~~~~~~l~~~~~~~---------------------~~ 254 (369)
T PRK08153 199 TAP-AGAAPP-IDTDDPNVIRMRTFSKAYGLAGARVGYAIG-APGTIKAFDKVRNHF---------------------GM 254 (369)
T ss_pred hcC-cccchh-hhhcCCCEEEEecchHhccCcchheeeeec-CHHHHHHHHHhhcCC---------------------CC
Confidence 321 111111 1111111366889999998664 2455554 444333221111111 01
Q ss_pred chHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHh
Q psy9807 370 RSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLL 448 (561)
Q Consensus 370 ~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~ 448 (561)
..+..+++...+. .+.+++..+...+..+++.+.|++. ++... +...+.+.++.
T Consensus 255 s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~----------------------- 309 (369)
T PRK08153 255 NRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDC----------------------- 309 (369)
T ss_pred CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEEC-----------------------
Confidence 2233333334443 2345556666677777788888765 66533 33333322211
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEE
Q psy9807 449 GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMA 528 (561)
Q Consensus 449 g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~ 528 (561)
........++.+.|.+.|..+..+....+..++|++
T Consensus 310 --------------------------------------------~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis 345 (369)
T PRK08153 310 --------------------------------------------GRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVS 345 (369)
T ss_pred --------------------------------------------CCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEe
Confidence 111223557888888887655334433345699998
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 529 VCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 529 ~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+. +++|+++++++++++.+.+
T Consensus 346 ~~----~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 346 CG----PDEELDLFAEALPEALEAA 366 (369)
T ss_pred cC----CHHHHHHHHHHHHHHHHHh
Confidence 65 5689999999999876543
No 249
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.42 E-value=1e-10 Score=122.71 Aligned_cols=163 Identities=15% Similarity=0.049 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
.+++.++.+++++..+.+ ..+|++||++||..|+..+|... + .++++++...
T Consensus 70 ~~~~~~la~~l~~~~~~~-----------~~~~~~sG~~a~~~A~~~a~~~~-------g--------~~~vi~~~~~~H 123 (377)
T PRK02936 70 NSLQEEVASLLAENSAGD-----------LVFFCNSGAEANEAALKLARKHT-------G--------KSKIVTFEQSFH 123 (377)
T ss_pred CHHHHHHHHHHHhcCCCC-----------EEEEeCCcHHHHHHHHHHHHHhc-------C--------CCeEEEECCCcC
Confidence 567888888888876543 46899999999999999876531 0 1234444333
Q ss_pred chHHHHHHhccC------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc----CHH
Q psy9807 206 TELEVVMLDWLG------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD----CLE 269 (561)
Q Consensus 206 ~s~~kaa~~~g~------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id----pl~ 269 (561)
.+..-+..+.+. .+..+| ..|+++|++.+.+ .+.+|+.....+..|.+. +++
T Consensus 124 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~~~~--------~~~~ii~e~i~~~~G~~~~~~~~l~ 191 (377)
T PRK02936 124 GRTFGTMSATGQEKIKEGFGPLLPGFTHVP----FNDIKALKEVMNE--------EVAAVMLEVVQGEGGVIPADPAFLQ 191 (377)
T ss_pred CCcHHhhhccCCccccccCCCCCCCceEeC----CCCHHHHHHhccC--------CeEEEEEecccCCCCCccCCHHHHH
Confidence 222223222221 112222 2378899988865 456777776666666553 499
Q ss_pred HHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEec
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLK 331 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r 331 (561)
+|.++|++||+++++|.+|.+.............++ ..|.+ ++.|.++.-+..|.+..+
T Consensus 192 ~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~-~~di~--t~sK~l~~G~~ig~v~~~ 250 (377)
T PRK02936 192 EVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGL-DPDIV--TVAKGLGNGIPVGAMIGK 250 (377)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCC-CCcEE--EEcccccCCCccEEEEEc
Confidence 999999999999999999875322111000001122 24655 579999843346666653
No 250
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.42 E-value=4.9e-11 Score=124.85 Aligned_cols=228 Identities=12% Similarity=0.067 Sum_probs=134.9
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
++..+++++.+|.+ ..++++|||.|+..++.++. . .+ ++++++.... .+...
T Consensus 34 ~~~e~~la~~~g~~-----------~~v~~~sgt~al~~~l~~~~---~------~~-------Gd~Viv~~~t~~~~~~ 86 (375)
T PRK11706 34 RRCQQWLEQRFGSA-----------KVLLTPSCTAALEMAALLLD---I------QP-------GDEVIMPSYTFVSTAN 86 (375)
T ss_pred HHHHHHHHHHhCCC-----------eEEEECCHHHHHHHHHHHhC---C------CC-------CCEEEECCCCcHHHHH
Confidence 33444667777774 46899999999766554320 0 00 2234444334 66677
Q ss_pred HHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhc
Q psy9807 211 VMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAY 288 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~ 288 (561)
++...|.+++.+++ . .+.+|+++|++++.+ ++.+|+.+ ..+|...++++|.++|++||+++++|+||
T Consensus 87 ~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~--------~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~ 155 (375)
T PRK11706 87 AFVLRGAKIVFVDIRPDTMNIDETLIEAAITP--------KTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQ 155 (375)
T ss_pred HHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC--------CCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECcc
Confidence 77888999999998 3 458999999999866 45566654 35798899999999999999999999999
Q ss_pred ccccccCccccccccCccccceeeecCC--ccccccccceeEEecChhhHHHhh--cc---CCCccccCCCCCCCCCCcc
Q psy9807 289 AGSAFICPENRYLMKGVELADSFNFNPH--KWMLVTFDCSAMWLKDPSWVVNAF--NV---DPLYLKHDQQGSAPDYRHW 361 (561)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~H--K~l~~P~g~g~l~~r~~~~l~~~~--~~---~~~yl~~~~~~~~~~~~~~ 361 (561)
+.+..... +. ... ..|.-++|+| |.+.+ ..-|++++.+.....+.. .. ....... +....+...
T Consensus 156 a~g~~~~~--~~-~g~--~~~~~~~Sf~~~K~l~~-g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~ 226 (375)
T PRK11706 156 GVMSTYKG--RA-LGT--IGHIGCFSFHETKNYTA-GEGGALLINDPALIERAEIIREKGTNRSQFFR---GQVDKYTWV 226 (375)
T ss_pred ccccccCC--ee-eec--CcCEEEEeCCCCccccc-cCCeEEEECCHHHHHHHHHHHHcCCCcchhhc---cCCCcceee
Confidence 85542221 11 111 1366666766 98864 344666666654433221 11 0000000 000000000
Q ss_pred cccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 362 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD 408 (561)
Q Consensus 362 ~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 408 (561)
.+..+.+...+ -+++-..-...++++.++..++++++.+.|...+
T Consensus 227 ~~g~~~~~~~~--~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~ 271 (375)
T PRK11706 227 DIGSSYLPSEL--QAAYLWAQLEAADRINQRRLALWQRYYDALAPLA 271 (375)
T ss_pred ecccccCcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 11112221211 1222222234477788888899999999998876
No 251
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.41 E-value=2.1e-10 Score=120.78 Aligned_cols=242 Identities=12% Similarity=0.002 Sum_probs=140.3
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCC-CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~-~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
.|...+...++-+.+.+|+.+..|.+-+ .. ..++|+|++++...++.+..+ + ++.
T Consensus 63 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~-------~~~~I~it~Gs~~al~~~~~~l~~----------~-------gd~ 118 (388)
T PRK07366 63 GYLLFHGTLDFREAAAQWYEQRFGLAVD-------PETEVLPLIGSQEGTAHLPLAVLN----------P-------GDF 118 (388)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcCC-------CcCeEEECCCcHHHHHHHHHHhCC----------C-------CCE
Confidence 4544455567888899999888776422 12 356788888876554443211 0 234
Q ss_pred eEEeccc-chHHHHHHhccCCeEEeeC-CC--CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHH
Q psy9807 199 LIASPAC-TELEVVMLDWLGKMLDLPK-EF--LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEI 271 (561)
Q Consensus 199 ~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~--g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI 271 (561)
+++.... ......++..|.+++.+|. .+ ..+|++++++.+.. .+.+++.+...+.||.+-+ +++|
T Consensus 119 Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~--------~~k~i~l~~p~NPTG~~~s~~~~~~l 190 (388)
T PRK07366 119 ALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA--------QARLMVLSYPHNPTTAIAPLSFFQEA 190 (388)
T ss_pred EEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc--------cceEEEEeCCCCCCCccCCHHHHHHH
Confidence 5554444 4455667888999999998 33 45777888776644 3556666677888998854 5567
Q ss_pred HHHHhhcCceEEechhcccccccCccc-cccccCccc-cc--eeeecCCcccccccc-ceeEEecChhhHHHhhccCCCc
Q psy9807 272 GQVCRQKDVWLHVDAAYAGSAFICPEN-RYLMKGVEL-AD--SFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLY 346 (561)
Q Consensus 272 ~~ia~~~~~~lhVDaA~gg~~~~~~~~-~~~~~gi~~-aD--si~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~y 346 (561)
+++|++||+|+++|.+|+-... .+.. ...+..+.. -+ .+..++.|.++.|.- +|.++ .++..+.........+
T Consensus 191 ~~~a~~~~~~ii~De~Y~~~~~-~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v-~~~~li~~l~~~~~~~ 268 (388)
T PRK07366 191 VAFCQQHDLVLVHDFPYVDLVF-DGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAI-GNAQLIQALRQVKAVV 268 (388)
T ss_pred HHHHHHcCeEEEEecchhhccc-CCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehc-CCHHHHHHHHHHHhhc
Confidence 7789999999999999874322 1110 111111111 12 456799999976643 55554 4544443222111111
Q ss_pred cccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 347 LKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
- .. . .. .....++..+ ....+++..+...+..+++.+.|++. ++....+
T Consensus 269 ~----------~~-----~---~~-~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p 319 (388)
T PRK07366 269 D----------FN-----Q---YR-GILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWPVPLP 319 (388)
T ss_pred c----------cC-----C---CH-HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCC
Confidence 0 00 0 00 0011122222 23456666777777778888888876 6654333
No 252
>PLN02231 alanine transaminase
Probab=99.40 E-value=6.6e-10 Score=120.81 Aligned_cols=149 Identities=11% Similarity=0.029 Sum_probs=107.6
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q psy9807 118 GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 197 (561)
Q Consensus 118 ~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~ 197 (561)
.+.|..+....++-+.+.+|+.+..|++-+ ....++|+|++++...++.+.... + ++
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~-------pe~I~iT~Ga~~ai~~~~~~l~~~---------~-------gd 217 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPAD-------PNDIFLTDGASPAVHMMMQLLIRS---------E-------KD 217 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCC-------cccEEEeCCHHHHHHHHHHHhccC---------C-------CC
Confidence 344666666778889999999888786532 136889999999876665543210 0 12
Q ss_pred ceEEecccchH-HHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHH
Q psy9807 198 NLIASPACTEL-EVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEE 270 (561)
Q Consensus 198 ~~vv~~s~~s~-~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~e 270 (561)
.+++....|.. ..++...|++++.++. . ++.+|+++|++++++ .+..+..+.+++++.-.+.||.+- .+++
T Consensus 218 ~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~--~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~ 295 (534)
T PLN02231 218 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLED--ARSKGITVRALVVINPGNPTGQVLAEENQRD 295 (534)
T ss_pred EEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHH--HhhcCCCeEEEEEeCCCCCCCcCCCHHHHHH
Confidence 45555545444 4445778889999988 3 368999999999977 555554677777777778889884 6778
Q ss_pred HHHHHhhcCceEEechhcccc
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~ 291 (561)
|+++|++||+|++.|.+|.-.
T Consensus 296 Iv~~a~~~~l~lI~DEvY~~l 316 (534)
T PLN02231 296 IVEFCKQEGLVLLADEVYQEN 316 (534)
T ss_pred HHHHHHHcCCEEEEEccchhc
Confidence 888999999999999998753
No 253
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.39 E-value=4.9e-10 Score=118.54 Aligned_cols=267 Identities=11% Similarity=0.029 Sum_probs=147.1
Q ss_pred HHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCC-CeEEeCChhHHHHHHHHHHHHHHHH
Q psy9807 103 PAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQ 181 (561)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~-~g~~t~ggT~anl~al~~ar~~~~~ 181 (561)
+.++..+.....+.....|.......++-+.+.+|+.+..|.+-+ .. ..++|+|++++...++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~-------~~~~I~it~G~~~al~~~~~~l~~---- 117 (403)
T PRK08636 49 QHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLD-------PETEVVATMGSKEGYVHLVQAITN---- 117 (403)
T ss_pred HHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCCeEEECCChHHHHHHHHHHhCC----
Confidence 334444433332222334444445567888999999988886532 12 378899888887555543211
Q ss_pred HHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhc-CCceEEEEEe
Q psy9807 182 RVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREM-CSDLLQVVAT 256 (561)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~-g~~p~~vv~t 256 (561)
+ ++.+++.... ......+...|.+++.+|. +++.+|++.|...+++ .... ..++.+++.+
T Consensus 118 ------~-------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--~~~~~~~~~~~i~~~ 182 (403)
T PRK08636 118 ------P-------GDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEK--ALRESSPKPKYVVVN 182 (403)
T ss_pred ------C-------CCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHH--HHhhccCCceEEEEe
Confidence 0 2344444444 4444556778999999887 3468998876555543 2211 2246677777
Q ss_pred cCCCCCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCccc-cc--eeeecCCcccccccc-ceeEE
Q psy9807 257 LGTTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVEL-AD--SFNFNPHKWMLVTFD-CSAMW 329 (561)
Q Consensus 257 ~gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~-aD--si~~~~HK~l~~P~g-~g~l~ 329 (561)
...+.||.+-+ +++|+++|++|++|+++|.+|+-... .+.....+..++. .| ..+.++.|.++.|.- +|.++
T Consensus 183 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv 261 (403)
T PRK08636 183 FPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITF-DGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVV 261 (403)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhcc-CCCCCCChhcCCCccccEEEEEecccccCCccceeeeee
Confidence 66888898854 57778889999999999999884322 1100011111211 12 235689999976644 55554
Q ss_pred ecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy9807 330 LKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR 409 (561)
Q Consensus 330 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g 409 (561)
.++..+.. +.....+... ..+........+ .+.. ....++++.+...+..+.+.+.|++. +
T Consensus 262 -~~~~li~~-~~~~~~~~~~--------------~~~~~~q~~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~ 322 (403)
T PRK08636 262 -GNKKLVGA-LKKIKSWLDY--------------GMFTPIQVAATI-ALDG-DQSCVEEIRETYRKRRDVLIESFANA-G 322 (403)
T ss_pred -CCHHHHHH-HHHHHHHhcc--------------cCChHHHHHHHH-HHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 45443332 2211111000 000001111111 1111 23445566666677777788888876 5
Q ss_pred eEEecc
Q psy9807 410 FEVIYE 415 (561)
Q Consensus 410 ~~l~~~ 415 (561)
+++..+
T Consensus 323 ~~~~~p 328 (403)
T PRK08636 323 WELQKP 328 (403)
T ss_pred CcccCC
Confidence 654433
No 254
>PRK03321 putative aminotransferase; Provisional
Probab=99.39 E-value=1.4e-10 Score=120.49 Aligned_cols=168 Identities=10% Similarity=-0.040 Sum_probs=104.5
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccc-hHHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACT-ELEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~-s~~ka 211 (561)
++.+.+++++|.+++ ..++|+|+++++..++.+. .. + ++.+++....+ ....+
T Consensus 61 ~lr~~ia~~~~~~~~---------~I~~~~G~~~~l~~~~~~~----~~------~-------gd~Vli~~p~y~~~~~~ 114 (352)
T PRK03321 61 ELRAALAEHLGVPPE---------HVAVGCGSVALCQQLVQAT----AG------P-------GDEVIFAWRSFEAYPIL 114 (352)
T ss_pred HHHHHHHHHhCcCHH---------HEEECCCHHHHHHHHHHHh----cC------C-------CCEEEeCCCCHHHHHHH
Confidence 344455666676543 4677777766654433221 10 0 12344332223 33345
Q ss_pred HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh--cCceEEechhc
Q psy9807 212 MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ--KDVWLHVDAAY 288 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~--~~~~lhVDaA~ 288 (561)
++..|.+++.+|. .++.+|++.+++.+.+ .+.+|+.+...+.||.+-|.++|.++|++ +|+++++|++|
T Consensus 115 ~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~--------~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y 186 (352)
T PRK03321 115 VQVAGATPVQVPLTPDHTHDLDAMAAAITD--------RTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAY 186 (352)
T ss_pred HHHcCCEEEEccCCCCCCCCHHHHHHhhcc--------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechH
Confidence 5678899999998 5789999999998865 45677777888999999999999999987 59999999999
Q ss_pred ccccccCccccccccCcc-ccc-eeeecCCccccccc-cceeEEecChhhH
Q psy9807 289 AGSAFICPENRYLMKGVE-LAD-SFNFNPHKWMLVTF-DCSAMWLKDPSWV 336 (561)
Q Consensus 289 gg~~~~~~~~~~~~~gi~-~aD-si~~~~HK~l~~P~-g~g~l~~r~~~~l 336 (561)
+.... .......+...+ .-+ .+..++.|.++.|. -+|.++. ++..+
T Consensus 187 ~~~~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~-~~~~~ 235 (352)
T PRK03321 187 VEYVR-DDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVG-HPEVI 235 (352)
T ss_pred HHhcc-CcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcC-CHHHH
Confidence 75332 111111111111 112 44558899987553 3566665 44433
No 255
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.39 E-value=2.7e-10 Score=118.79 Aligned_cols=287 Identities=9% Similarity=0.021 Sum_probs=168.4
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-cceEEecccchH-H
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII-ANLIASPACTEL-E 209 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~-~~~vv~~s~~s~-~ 209 (561)
.++++.+++.+|.+++ ..++|+|++++...++.+.... + +.+++....++. .
T Consensus 62 ~~lr~~ia~~~~~~~~---------~I~~t~G~~~~l~~~~~~~~~~-----------------g~~~vlv~~p~y~~~~ 115 (364)
T PRK04781 62 PGLRSALAALYGCAPE---------QLLIGRGSDEAIDLLVRALCVP-----------------GRDAVLVTPPVFGMYA 115 (364)
T ss_pred HHHHHHHHHHhCcChH---------HEEEeCCHHHHHHHHHHHhcCC-----------------CCCeEEEcCCChHHHH
Confidence 3455566777787654 5788898888865554432100 1 123333333443 3
Q ss_pred HHHHhccCCeEEeeC-C---CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh--cCceEE
Q psy9807 210 VVMLDWLGKMLDLPK-E---FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ--KDVWLH 283 (561)
Q Consensus 210 kaa~~~g~~v~~v~~-~---~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~--~~~~lh 283 (561)
..++..|.+++.+|. + +..+|++++.+.+.. . .+.+|+++..++.||.+-|.+++.++++. +++|++
T Consensus 116 ~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~--~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI 188 (364)
T PRK04781 116 VCARLQNAPLVEVPLVDGADGFHADVPAIVAAALA--S-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVV 188 (364)
T ss_pred HHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhc--c-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEE
Confidence 445778999999997 2 235788887665533 1 45677777889999999999888888764 479999
Q ss_pred echhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccc
Q psy9807 284 VDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQ 362 (561)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (561)
+|.+|+-.. ..+.........++ =.+.-++.|.++.|. =.|.+.. +++.+.........| .
T Consensus 189 ~Deay~~f~-~~~~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v~-~~~l~~~l~~~~~~~---------------~ 250 (364)
T PRK04781 189 VDEAYGEFS-DVPSAVGLLARYDN-LAVLRTLSKAHALAAARIGSLIA-NAELIAVLRRCQAPY---------------P 250 (364)
T ss_pred EeCcchhhc-CCcchHHHHhhCCC-EEEEecChhhcccccceeeeeeC-CHHHHHHHHhccCCC---------------C
Confidence 999988432 11111111111111 256789999998664 3555554 554443322221111 0
Q ss_pred ccCcCCcchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchh
Q psy9807 363 IPLGRRFRSLKLWFVLRLLG---VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSL 439 (561)
Q Consensus 363 ~~~sr~~~al~lw~~l~~~g---~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~ 439 (561)
...+...++...+. .....+.++...+..+.+.+.|++.+++..+.++..+.+.++
T Consensus 251 ------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~--------------- 309 (364)
T PRK04781 251 ------VPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVR--------------- 309 (364)
T ss_pred ------CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEE---------------
Confidence 11122222233332 233455556667777888999988877753444444333221
Q ss_pred hHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE
Q psy9807 440 KLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI 519 (561)
Q Consensus 440 k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 519 (561)
+. + ..++.+.+.+.|..+..+...
T Consensus 310 ----------------------------------------------------~~--~--~~~~~~~l~~~gI~v~~~~~~ 333 (364)
T PRK04781 310 ----------------------------------------------------FD--D--AEAAFQALLAAGVVVRDQRAA 333 (364)
T ss_pred ----------------------------------------------------cC--C--HHHHHHHHHHCCeEEeeCCCC
Confidence 11 1 246777888887665544322
Q ss_pred -CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 520 -RDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 520 -~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
....++|++++ +.++.++++++|+++.
T Consensus 334 ~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 334 PRLSDALRITLG----TPEQNDRVLAALQRTQ 361 (364)
T ss_pred CCCCCeEEEeCC----CHHHHHHHHHHHHHHH
Confidence 22468999966 4578999999998753
No 256
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.39 E-value=1.8e-10 Score=123.82 Aligned_cols=248 Identities=13% Similarity=0.139 Sum_probs=144.9
Q ss_pred hhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc
Q psy9807 126 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC 205 (561)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~ 205 (561)
...++-+.+.+|+.+.+|.+-.. +....++|+|+++++...+.+..+ + ++.+++....
T Consensus 87 G~~~LR~aiA~~l~~~~~~~~~v-----~~~~Iiit~Ga~~al~~l~~~l~~----------p-------Gd~Vlv~~P~ 144 (468)
T PLN02450 87 GLPAFKNALAEFMSEIRGNKVTF-----DPNKLVLTAGATSANETLMFCLAE----------P-------GDAFLLPTPY 144 (468)
T ss_pred ChHHHHHHHHHHHHHhhCCCCCc-----ChHHeEEccChHHHHHHHHHHhCC----------C-------CCEEEECCCC
Confidence 33467888889998877743110 012578888888886555444211 1 1234444334
Q ss_pred ch-HHHHHH-hccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhh
Q psy9807 206 TE-LEVVML-DWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQ 277 (561)
Q Consensus 206 ~s-~~kaa~-~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~ 277 (561)
|. +...+. ..|++++.||+ ++..+|+++|++++++ ..+.+.++.+|+++.-.+.||.+-+ +++|.++|++
T Consensus 145 Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~--~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~ 222 (468)
T PLN02450 145 YPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQ--AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITA 222 (468)
T ss_pred CCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHH--HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHH
Confidence 43 445555 47889999987 3457788999999877 5555667777778778889998865 5667788999
Q ss_pred cCceEEechhcccccccCcccccccc--------Cccc--cceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCc
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMK--------GVEL--ADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLY 346 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~--------gi~~--aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~y 346 (561)
||+|+++|.+|+....-.+.....+. +... -=.+..++.|.++.| .=+|+++..+.... ..+.....|
T Consensus 223 ~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~~~~~ 301 (468)
T PLN02450 223 KNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATKMSSF 301 (468)
T ss_pred CCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHH-HHHHHHhhc
Confidence 99999999999854322211111110 0000 125678999999755 44677766544322 222211111
Q ss_pred cccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Q psy9807 347 LKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGV-----KYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 420 (561)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~-----~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~ 420 (561)
.. ...+...++...+.. .-+++..++..+..+.+.+.|++. ++.+. ++..+.
T Consensus 302 ~~--------------------~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~-~~~~g~ 358 (468)
T PLN02450 302 GL--------------------VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL-KSNAGL 358 (468)
T ss_pred CC--------------------CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCceE
Confidence 00 011112222222221 234556666777777788888877 77654 344443
No 257
>PRK09148 aminotransferase; Validated
Probab=99.39 E-value=6.9e-10 Score=117.44 Aligned_cols=244 Identities=8% Similarity=-0.038 Sum_probs=140.8
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++.+.+.+|+.+.+|.+-+ .....++|+|++++...++.+..+. ++.+
T Consensus 63 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~------~~~~I~it~G~~~al~~~~~~l~~~-----------------gd~V 119 (405)
T PRK09148 63 RYSASKGIPGLRRAQAAYYARRFGVKLN------PDTQVVATLGSKEGFANMAQAITAP-----------------GDVI 119 (405)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCcEEEcCChHHHHHHHHHHhcCC-----------------CCEE
Confidence 3443344568889999999887776421 0014788999998876655432110 2345
Q ss_pred EEecccc-hHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCH---HHHHHH
Q psy9807 200 IASPACT-ELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCL---EEIGQV 274 (561)
Q Consensus 200 vv~~s~~-s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl---~eI~~i 274 (561)
++....| .....+...|.+++.+|. .++ .+++.+++.++. .. .++.+|+.+..++.||.+-+. ++|+++
T Consensus 120 l~~~P~y~~~~~~~~~~g~~v~~v~~~~~~-~~~~~l~~~~~~--~~---~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~ 193 (405)
T PRK09148 120 LCPNPSYPIHAFGFIMAGGVIRSVPAEPDE-EFFPALERAVRH--SI---PKPIALIVNYPSNPTAYVADLDFYKDVVAF 193 (405)
T ss_pred EEcCCCCcccHHHHHhcCCEEEEEeCCCCC-CCccCHHHHHhh--cc---ccceEEEEeCCCCCCCcCCCHHHHHHHHHH
Confidence 5544443 344556778999999998 433 346777777654 21 145677777778899999776 678889
Q ss_pred HhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
|++||+++++|.+|+....-....... +.+......+..+++|.++.|. =+|.+.. +...+.. +.....++...
T Consensus 194 a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i~~-l~~~~~~~~~~- 270 (405)
T PRK09148 194 AKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLIAA-LTRVKSYLDYG- 270 (405)
T ss_pred HHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHHHH-HHHHHHHhccC-
Confidence 999999999999998532211001111 1111112345789999998664 3566654 5444432 22111111000
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
...+...++...+ +...+++..+...+..+++.+.|++. ++.+.
T Consensus 271 -----------------~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~ 316 (405)
T PRK09148 271 -----------------AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIP 316 (405)
T ss_pred -----------------CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccC
Confidence 0111112222222 23445566666777778888888875 66543
No 258
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.38 E-value=2.8e-10 Score=121.54 Aligned_cols=293 Identities=9% Similarity=-0.050 Sum_probs=172.7
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
..++-+.+.+|+.+.++-+ ...++|+|++++...++.+..+. ++.+++....
T Consensus 123 ~~~lr~~ia~~~~~~~~~~----------~~Iiit~G~~~al~~~~~~l~~p-----------------gd~Vlv~~P~y 175 (431)
T PRK15481 123 SPELHAWAARWLRDDCPVA----------FEIDLTSGAIDAIERLLCAHLLP-----------------GDSVAVEDPCF 175 (431)
T ss_pred CHHHHHHHHHHHhhccCCc----------CeEEEecCcHHHHHHHHHHhCCC-----------------CCEEEEeCCCc
Confidence 3456667777776543322 15788898888876655442110 2344554444
Q ss_pred chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEe-cCCCCCccccCHH---HHHHHHhhc-Cc
Q psy9807 206 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVAT-LGTTNCCAFDCLE---EIGQVCRQK-DV 280 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t-~gtt~tG~idpl~---eI~~ia~~~-~~ 280 (561)
......+...|.+++.+|.++..+|+++|++++++ .+.+++.+ ...+.||.+-+.+ +|.++|++| ++
T Consensus 176 ~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~--------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~ 247 (431)
T PRK15481 176 LSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQ--------GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQV 247 (431)
T ss_pred HHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHhc--------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCc
Confidence 55566678889999999993335899999998865 34455554 7888899998876 999999999 99
Q ss_pred eEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCC
Q psy9807 281 WLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYR 359 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (561)
|+++|.+|+-.. ..+ ....+.....--.+..+++|.++ | .-+|.++. ++..... +.....+...
T Consensus 248 ~ii~De~Y~~~~-~~~-~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~-~~~~~~~-~~~~~~~~~~---------- 312 (431)
T PRK15481 248 LVIIDDHFALLS-SSP-YHSVIPQTTQRWALIRSVSKALG-PDLRLAFVAS-DSATSAR-LRLRLNSGTQ---------- 312 (431)
T ss_pred eEEecCchhhhc-cCC-CCCCCcCCCCCEEEEeeeccccC-CCceeEEEeC-CHHHHHH-HHHHHhcccc----------
Confidence 999999987432 111 11111111111367789999999 6 33665544 4433322 2111010000
Q ss_pred cccccCcCCcchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccc
Q psy9807 360 HWQIPLGRRFRSLKLWFVLRLLGV----KYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRR 435 (561)
Q Consensus 360 ~~~~~~sr~~~al~lw~~l~~~g~----~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~ 435 (561)
....+..+++...+.. ..+++..+...+..+.+.+.|++. ++++..|.....+.++
T Consensus 313 --------~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~----------- 372 (431)
T PRK15481 313 --------WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLP----------- 372 (431)
T ss_pred --------CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEE-----------
Confidence 0112223333333322 224555666677777788888776 6654333333332221
Q ss_pred cchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEE
Q psy9807 436 FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLV 515 (561)
Q Consensus 436 ~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~ 515 (561)
++. + ..++.+.|.+.|..+..
T Consensus 373 --------------------------------------------------------l~~-~--~~~~~~~l~~~gV~v~p 393 (431)
T PRK15481 373 --------------------------------------------------------LDT-D--SQATALTLAKSGWLVRE 393 (431)
T ss_pred --------------------------------------------------------CCC-C--HHHHHHHHHHCCcEEec
Confidence 111 1 24677777777766654
Q ss_pred eeeE---CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 516 PSKI---RDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 516 ~~~~---~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+... .+..++|+++++. ++++++++++.|.++.
T Consensus 394 g~~f~~~~~~~~iRis~~~~--~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 394 GEAFGVSAPSHGLRITLSTL--NDAEINRLAADLHQAL 429 (431)
T ss_pred CCccccCCCCCeEEEEcCCC--ChHHHHHHHHHHHHHh
Confidence 4333 1235899998753 4678999999888764
No 259
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.38 E-value=4.4e-10 Score=118.36 Aligned_cols=156 Identities=13% Similarity=0.023 Sum_probs=91.7
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c-hHHHHHHhccCCeEE---eeC-CCC---
Q psy9807 157 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T-ELEVVMLDWLGKMLD---LPK-EFL--- 227 (561)
Q Consensus 157 ~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~-s~~kaa~~~g~~v~~---v~~-~~g--- 227 (561)
..+|++|||+||..|+.++|...... +++ ...++++.... . +..-+....+..... .|. ++.
T Consensus 90 ~v~~~~sGseA~~~al~~ar~~~~~~---G~~------~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (389)
T PRK01278 90 KVFFTNSGAEAVECAIKTARRYHYGK---GHP------ERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQV 160 (389)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhc---CCC------CCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEe
Confidence 46999999999999999998753211 000 01234444433 2 212222222221110 111 111
Q ss_pred -ccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc----cCHHHHHHHHhhcCceEEechhcccccccCccccccc
Q psy9807 228 -ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLM 302 (561)
Q Consensus 228 -~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~ 302 (561)
..|+++|++.+.+ ++.+|++.-....+|.+ +++++|.++|++||+++++|.+|.|.......+....
T Consensus 161 ~~~d~~~l~~~l~~--------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~ 232 (389)
T PRK01278 161 PFGDIEALKAAITP--------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEW 232 (389)
T ss_pred CCCCHHHHHHhhCC--------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecc
Confidence 3689999998865 46677777666556633 5899999999999999999999986432221111111
Q ss_pred cCccccceeeecCCccccccccceeEEecC
Q psy9807 303 KGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 303 ~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
.++ ..|.+ ++.|.++.-+..|.++.++
T Consensus 233 ~~~-~pdi~--t~sK~l~~G~~ig~~~~~~ 259 (389)
T PRK01278 233 AGV-TPDIM--AVAKGIGGGFPLGACLATE 259 (389)
T ss_pred cCC-CCCEE--EEehhccCCcceEEEEEcH
Confidence 133 24654 5689987444577777654
No 260
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.38 E-value=3e-10 Score=116.97 Aligned_cols=279 Identities=11% Similarity=0.063 Sum_probs=163.6
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++++.+++.+|.++. ..++|+|++++...++.. .. .+++++.... .....
T Consensus 43 ~~lr~~ia~~~~~~~~---------~I~it~Gs~~~l~~~~~~-----~~--------------~~~vv~~~P~y~~y~~ 94 (332)
T PRK06425 43 TDIEDQIKIYTQGLKI---------KVLIGPGLTHFIYRLLSY-----IN--------------VGNIIIVEPNFNEYKG 94 (332)
T ss_pred HHHHHHHHHHhCCCcc---------eEEECCCHHHHHHHHHHH-----hC--------------CCcEEEeCCChHHHHH
Confidence 3455566888888764 578889888886554421 10 1245555444 55666
Q ss_pred HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEechh
Q psy9807 211 VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVDAA 287 (561)
Q Consensus 211 aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA 287 (561)
+++..|.+++.+|.+...+|.+.++ + . .+.+|+.+.-.+.||.+-+ +++|+++|++||+|+++|.+
T Consensus 95 ~~~~~G~~v~~vp~~~~~~~~~~l~----~--~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~ 163 (332)
T PRK06425 95 YAFTHGIRISALPFNLINNNPEILN----N--Y-----NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEA 163 (332)
T ss_pred HHHHcCCeEEEEeCCcccCcHHHHh----h--c-----CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecc
Confidence 7888999999999843445554443 2 1 3456666788889999866 66777788999999999999
Q ss_pred cccccccC-ccccccccCccccceeeecCCcccccccc-ceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccC
Q psy9807 288 YAGSAFIC-PENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPL 365 (561)
Q Consensus 288 ~gg~~~~~-~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (561)
|+-...-. +.........+ --.+..++.|.++.|.- +|.+.. ++..+.........| ..
T Consensus 164 Y~~~~~~~~~~~~~~~~~~~-~vi~~~SfSK~~~l~GlRiGy~v~-~~~li~~l~~~~~~~---------------~~-- 224 (332)
T PRK06425 164 FIDFVPNRAEEDVLLNRSYG-NVIIGRSLTKILGIPSLRIGYIAT-DDYNMKISRKITEPW---------------SV-- 224 (332)
T ss_pred hhccccccchhHHHHhccCC-CEEEEeecHHhcCCchhhheeeec-CHHHHHHHHHcCCCC---------------cc--
Confidence 87432110 01111111110 12456799999986643 555554 444443322211111 00
Q ss_pred cCCcchHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHH
Q psy9807 366 GRRFRSLKLWFVLRLLGVKY-LQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFV 444 (561)
Q Consensus 366 sr~~~al~lw~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~ 444 (561)
..... ..+....... +++..+...+..+++.+.|++. ++++..++..+.+.+
T Consensus 225 ----~~~~~-~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~--------------------- 277 (332)
T PRK06425 225 ----CDPAI-DFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITF--------------------- 277 (332)
T ss_pred ----CHHHH-HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEE---------------------
Confidence 01111 1122212222 3455666677778888888887 777654444444333
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE--CCE
Q psy9807 445 LRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI--RDV 522 (561)
Q Consensus 445 ~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--~g~ 522 (561)
+.+ + ..++.+.|.+.|.....+... .+.
T Consensus 278 ----------------------------------------------~~~--~--~~~~~~~l~~~gi~v~~~~~f~~~~~ 307 (332)
T PRK06425 278 ----------------------------------------------MIP--D--AHDFYSYLLKNGILVRLLDDYECLGE 307 (332)
T ss_pred ----------------------------------------------EcC--C--HHHHHHHHHHCCeEEEECCCCCCCCC
Confidence 221 1 346778888887555444332 234
Q ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 523 YFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 523 ~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
.++|+++. +.++.++++++|+++
T Consensus 308 ~~iRis~~----~~~~~~~l~~al~~~ 330 (332)
T PRK06425 308 QYIRIAIR----RRSFNIKLVNALRNF 330 (332)
T ss_pred CEEEEEeC----CHHHHHHHHHHHHHH
Confidence 69999966 446899999999865
No 261
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.37 E-value=6.3e-10 Score=117.41 Aligned_cols=173 Identities=13% Similarity=0.026 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccc-
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACT- 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~- 206 (561)
..+..++.+++++..|.+ ..+|++||++||..|+.+++...... .. ..++++++...+
T Consensus 80 ~~~~~~la~~l~~~~~~~-----------~v~~~~gg~eA~~~al~~a~~~~~~~------~~----~~~~ii~~~~~yh 138 (396)
T PRK02627 80 IEPQEELAEKLVELSGMD-----------KVFFCNSGAEANEAAIKLARKYGHKK------GI----EKPEIITAENSFH 138 (396)
T ss_pred CHHHHHHHHHHHhhcCCC-----------EEEECCCcHHHHHHHHHHHHHHhccc------CC----CCCeEEEECCCcC
Confidence 456667777888887763 46999999999999999887642110 00 012344443331
Q ss_pred -hHHHHHHhccCCeE---EeeC-CCC----ccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc----cCHHHHHH
Q psy9807 207 -ELEVVMLDWLGKML---DLPK-EFL----ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF----DCLEEIGQ 273 (561)
Q Consensus 207 -s~~kaa~~~g~~v~---~v~~-~~g----~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i----dpl~eI~~ 273 (561)
....+....+.... ..|. .+. ..|+++|++.+.+ .+.+|+++.....+|.. +.+++|.+
T Consensus 139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~--------~~~~vii~p~~~~~G~~~~~~~~l~~l~~ 210 (396)
T PRK02627 139 GRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITD--------KTAAVMLEPIQGEGGVNPADKEYLQALRE 210 (396)
T ss_pred cccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCC--------CeEEEEEecccCCCCCccCCHHHHHHHHH
Confidence 11112222222111 1111 111 3388999988854 46667776655566632 35999999
Q ss_pred HHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
+|++||+++++|.+|++.............++ ..|.++ +.|.++.....|.+..++
T Consensus 211 l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~~~~G~rig~~~~~~ 266 (396)
T PRK02627 211 LCDENGILLILDEVQTGMGRTGKLFAYQHYGI-EPDIMT--LAKGLGGGVPIGAVLAKE 266 (396)
T ss_pred HHHHcCCEEEEechhcCCCccCceeeehhcCC-CCCEEE--EcchhhCCcccEEEEEcH
Confidence 99999999999999986422111010001122 246554 679998556688887754
No 262
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.37 E-value=4.8e-10 Score=118.62 Aligned_cols=298 Identities=14% Similarity=0.108 Sum_probs=165.2
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TEL 208 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~ 208 (561)
.++.+.++++++.+ ..+|++|||+||..|+.+||.....+ ..+ ...+++.+... .+.
T Consensus 84 ~~la~~l~~~~~~~-----------~v~~~~sGseA~e~Alk~ar~~~~~~---~~~------~r~~ii~~~~~yHG~t~ 143 (406)
T PRK12381 84 LRLAKKLIDATFAD-----------RVFFCNSGAEANEAALKLARKYAHDR---YGS------HKSGIVAFKNAFHGRTL 143 (406)
T ss_pred HHHHHHHHhhCCCC-----------eEEEcCCcHHHHHHHHHHHHHHHhhc---CCC------CCCeEEEECCCcCCcch
Confidence 34445556665442 46899999999999999998653211 000 01234443333 222
Q ss_pred HHHHHhccCC------------eEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCc----cccCHHHHH
Q psy9807 209 EVVMLDWLGK------------MLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC----AFDCLEEIG 272 (561)
Q Consensus 209 ~kaa~~~g~~------------v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG----~idpl~eI~ 272 (561)
-+..+.+.. +..+| ..|+++|++.+.+ .+.+|++.-.....| ..+.+++|.
T Consensus 144 -~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~l~~--------~~aaviiEPv~~~gg~~~~~~~~l~~l~ 210 (406)
T PRK12381 144 -FTVSAGGQPKYSQDFAPLPPDIRHAA----YNDLNSASALIDD--------QTCAVIVEPIQGEGGVIPADKAFLQGLR 210 (406)
T ss_pred -hHHhhcCCcccccCCCCCCCCeeEeC----CCCHHHHHHhccC--------CeeEEEEeCCcCCCCCcCCCHHHHHHHH
Confidence 222333321 22223 4578999988865 466677766555556 347899999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQ 352 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 352 (561)
++|++||+++++|.+|.|.......+.....++ ..|.+ +..|.++.-+..|.+..++. +...+... ...
T Consensus 211 ~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v-~pDi~--t~sK~l~gG~~ig~~~~~~~--~~~~~~~~---~~~--- 279 (406)
T PRK12381 211 ELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDVL--TTAKALGGGFPIGAMLTTEK--CASVMTVG---THG--- 279 (406)
T ss_pred HHHHHcCCEEEEcchhhCCCCCcchhhhHhhCC-CCCEE--EehhhhhCCCceEEEEEcHH--HHhhcCCC---CCC---
Confidence 999999999999999865432221111011233 25754 66799975455777776542 22222110 000
Q ss_pred CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeccc-cccceeeecccCcc
Q psy9807 353 GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVIYEV-LMGLVCFRLKHWQI 430 (561)
Q Consensus 353 ~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~~~-~~~~v~f~~~~~~~ 430 (561)
.+. .+-+........+++.+. -.++.++..++.+++.+.|++.. .+.++... ..+++
T Consensus 280 --------~t~-~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~--------- 338 (406)
T PRK12381 280 --------TTY-GGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLL--------- 338 (406)
T ss_pred --------CCC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEE---------
Confidence 000 111122222333344432 23466777788888888887651 12222111 11111
Q ss_pred ccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC-cHHHHHHHHHHHhC
Q psy9807 431 PLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP-NEINEKLLKRINGN 509 (561)
Q Consensus 431 ~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~-~~~~~~l~~~L~~~ 509 (561)
+.+.+... ......+.+.+.+.
T Consensus 339 ---------------------------------------------------------~~~~l~~~~~~~~~~~~~~l~~~ 361 (406)
T PRK12381 339 ---------------------------------------------------------IGCVLNAEYAGKAKQISQEAAKA 361 (406)
T ss_pred ---------------------------------------------------------EEEEecCchhhHHHHHHHHHHHC
Confidence 11111110 12345778888888
Q ss_pred CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 510 GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 510 g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
|.+.. +. +..++|+++. ...+++||+++++.|+++.+++.++
T Consensus 362 Gv~v~-~~---g~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~~~~~ 403 (406)
T PRK12381 362 GVMVL-IA---GPNVVRFAPA-LNISEEEITTGLDRFARACERFVSR 403 (406)
T ss_pred CcEEe-eC---CCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 86653 22 3458999865 4457889999999999988776543
No 263
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.37 E-value=5.5e-10 Score=125.67 Aligned_cols=352 Identities=11% Similarity=0.052 Sum_probs=197.0
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHH-HH------HHhhccccccccccChhhHHHHHH
Q psy9807 61 TAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVA-DI------LSDSIACIGFTWIASPACTELEVV 133 (561)
Q Consensus 61 ~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~------l~~~~n~~~~~~~~sp~~~~lE~~ 133 (561)
.+|+ +.+-.++++.+.+.-..+.. ...|.|--.-+--+|+++. .+ ++++ ..+.-+.|...-+.--+
T Consensus 41 ~lp~-~~sE~e~~~~~~~la~~N~~---~~~fig~G~y~~~~p~~i~r~v~~~p~~~Tay---tPyQ~EisQG~Le~l~e 113 (939)
T TIGR00461 41 QLEA-PSKEYEALAHLKKIASKNHK---FKSYIGMGYYGTILPPVIQRNLLENPGWYTAY---TPYQPEISQGRLEALLN 113 (939)
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCC---ccccCCCCcCCCcCChHHHHHHHhCchhhhcC---CCCChhhhhHHHHHHHH
Confidence 4554 45778899988876443322 2233321111122344444 22 2222 11122334444455557
Q ss_pred HHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc----chHH
Q psy9807 134 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC----TELE 209 (561)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~----~s~~ 209 (561)
...+++++.|++-. ...+..++|.+-- |+..|.+.. + + -..+++|..+. ..+.
T Consensus 114 ~Qt~i~eLtGm~~a---------NaSl~d~atA~aE-a~~~a~~~~--~----~-------~~~~vlv~~~~hP~~~~v~ 170 (939)
T TIGR00461 114 FQTVVSDLTGLPVA---------NASLLDEGTAAAE-AMALSFNVS--K----K-------KANKFFVAKDLHPQTKSVL 170 (939)
T ss_pred HHHHHHHHHCCChh---------hhhccchhhHHHH-HHHHHHHhh--c----C-------CCCEEEECCCCCcchHHHH
Confidence 78899999999854 3456666665432 333332211 0 0 01245554444 2233
Q ss_pred H-HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhc
Q psy9807 210 V-VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAY 288 (561)
Q Consensus 210 k-aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~ 288 (561)
+ -+...|.+++.++ +++|+..+ + .+ .+.....+..|.+.++++|++++|++|.++.|++=.
T Consensus 171 ~t~a~~~g~~v~~~~-------~~~l~~~~-~---------~~-~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~ 232 (939)
T TIGR00461 171 HTRAKPFGIEVIVVD-------CSDIKKAV-D---------VF-GCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADL 232 (939)
T ss_pred HHHHHhcCcEEEEEc-------HHHHhhcC-C---------EE-EEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEech
Confidence 3 2456677888775 45555443 2 23 444455677899999999999999999999996544
Q ss_pred ccccccCccccccccCccccceeeecCCcccc-----ccccceeEEecChhhHHHhhccCCCcccc-CCCCCCCCCCccc
Q psy9807 289 AGSAFICPENRYLMKGVELADSFNFNPHKWML-----VTFDCSAMWLKDPSWVVNAFNVDPLYLKH-DQQGSAPDYRHWQ 362 (561)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~-----~P~g~g~l~~r~~~~l~~~~~~~~~yl~~-~~~~~~~~~~~~~ 362 (561)
.+..++.+. |--.||+++.+.++|+. +|. .|++.+++. +.+.+. ...+.. .+..+.+.++ ++
T Consensus 233 ~al~ll~~P------ge~GaDi~vg~~q~fg~p~g~GGP~-aG~~a~~~~--l~r~lP--grivG~s~D~~G~~~~~-l~ 300 (939)
T TIGR00461 233 MALTLLTPP------GHYGADIVLGSSQRFGVPMGYGGPH-AAFFAVKDE--YNRKMP--GRIVGVSKDALGNTALR-LA 300 (939)
T ss_pred HHhCCcCCH------HHcCCcEEeeCCCccCCCCCCCCCc-eeeeeecHh--hHhhCC--CCceeEEecCCCCccce-ee
Confidence 333332221 11256999555555443 454 888888763 222221 111110 1111111111 11
Q ss_pred ccC----cCCcc---------h-HHH--HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecc
Q psy9807 363 IPL----GRRFR---------S-LKL--WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLK 426 (561)
Q Consensus 363 ~~~----sr~~~---------a-l~l--w~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~ 426 (561)
++. -||-. + +++ .+-+.++|.+|++++.++.+.++.++++.|++ .|+++..++-...+++
T Consensus 301 LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~fF~~~~v--- 376 (939)
T TIGR00461 301 LQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINKTWFDTLTV--- 376 (939)
T ss_pred cccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCccceEEE---
Confidence 111 12211 1 122 33367789999999999999999999999998 5999887644444333
Q ss_pred cCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHH
Q psy9807 427 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRI 506 (561)
Q Consensus 427 ~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L 506 (561)
+... ....++.+++
T Consensus 377 ----------------------------------------------------------------~~~~--~~~~~i~~~~ 390 (939)
T TIGR00461 377 ----------------------------------------------------------------KVGN--GISSELLKAA 390 (939)
T ss_pred ----------------------------------------------------------------EeCC--CCHHHHHHHH
Confidence 2210 1145788889
Q ss_pred HhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q psy9807 507 NGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIK 547 (561)
Q Consensus 507 ~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 547 (561)
.+.|.. +.. .....+++|+. -.+|++||+.+++++.
T Consensus 391 ~~~gi~-l~~---~~~~~i~~s~~-E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 391 EEFNIN-LRA---VDTTTVGIALD-ETTTKADVENLLKVFD 426 (939)
T ss_pred HHCCCe-eee---cCCCEEEEEee-cCCCHHHHHHHHHHhc
Confidence 888866 322 12247999966 5678899999999994
No 264
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.36 E-value=1.1e-09 Score=116.42 Aligned_cols=314 Identities=14% Similarity=0.091 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEe-CChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQ-GTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t-~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
....++.+.|++++..|... .....|+ +|||+||-.|+..||..- + ..+++.+...
T Consensus 82 ~~~~~lae~l~~~~~~~~~~------~~~~~f~~~sGseA~e~AlklAr~~t-------g--------r~~ii~~~~~yH 140 (425)
T PRK09264 82 TAKREFLETFEETILKPRGL------DYKVQFTGPTGTNAVEAALKLARKVT-------G--------RTNIVAFTNGFH 140 (425)
T ss_pred HHHHHHHHHHHHhhcCCcCC------CceEEEeCCCHHHHHHHHHHHHHHhc-------C--------CCeEEEECCccC
Confidence 44555666677765333210 0023464 799999999999998651 0 1234444333
Q ss_pred -chHHHHHHhc---------c---CCeEEeeCCCC----ccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---
Q psy9807 206 -TELEVVMLDW---------L---GKMLDLPKEFL----ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF--- 265 (561)
Q Consensus 206 -~s~~kaa~~~---------g---~~v~~v~~~~g----~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i--- 265 (561)
.+.. +..+. + ..+..+|..+. .-|+++|++.|++ .......+.+|++.-.....|.+
T Consensus 141 G~t~~-~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~--~~~~~~~~aavi~Epv~g~~G~~~~~ 217 (425)
T PRK09264 141 GMTLG-SLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLED--SSSGVDLPAAVIVETVQGEGGINVAS 217 (425)
T ss_pred CccHH-HHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHh--ccCCCCceEEEEEecccCCCCCcCCC
Confidence 2211 11111 1 13455554211 1377888988865 32111246677777666666754
Q ss_pred -cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccc-cccceeEEecChhhHHHhhccC
Q psy9807 266 -DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV-TFDCSAMWLKDPSWVVNAFNVD 343 (561)
Q Consensus 266 -dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~-P~g~g~l~~r~~~~l~~~~~~~ 343 (561)
+.|++|.++|++||+++++|..|.|.......+.....++ ..|.+++ .|.++. -+.+|++++++. +. .+.
T Consensus 218 ~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~PDi~t~--~K~l~~~G~pigav~~~~~--i~-~~~-- 289 (425)
T PRK09264 218 AEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGI-TPDIVTL--SKSISGYGLPMALVLIKPE--LD-VWK-- 289 (425)
T ss_pred HHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCC-CCCEEEe--ccccCCCccceEEEEEchh--hh-ccC--
Confidence 4799999999999999999999986432221111111233 4587766 598875 345688888653 21 121
Q ss_pred CCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHhcCC-CeE--Eecccccc
Q psy9807 344 PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL-GVKYLQEYIRKQISLAKEFEQLVRSDD-RFE--VIYEVLMG 419 (561)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~--l~~~~~~~ 419 (561)
... . .. +-....+...+++..+ ....-.++.++..++.++|.+.++++. .+. +......+
T Consensus 290 ~~~--~---~~-----------T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~G 353 (425)
T PRK09264 290 PGE--H---NG-----------TFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRG 353 (425)
T ss_pred CCc--c---CC-----------CCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecc
Confidence 000 0 00 0011222222222222 111112456666777777777776531 111 11111111
Q ss_pred ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHH
Q psy9807 420 LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEIN 499 (561)
Q Consensus 420 ~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~ 499 (561)
.+ +.+.+ +.....
T Consensus 354 l~------------------------------------------------------------------~~i~l-~~~~~~ 366 (425)
T PRK09264 354 MM------------------------------------------------------------------QGIDF-GDGELA 366 (425)
T ss_pred cE------------------------------------------------------------------EEEEe-cChHHH
Confidence 11 11111 123345
Q ss_pred HHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy9807 500 EKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKEEKEK 560 (561)
Q Consensus 500 ~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~~~~~ 560 (561)
..+.+.+.+.|.++. +... +...||++.. ...+++||+++++.|.++.+++.+++..|
T Consensus 367 ~~l~~~~~~~Gv~~~-~~~~-~~~~lr~~p~-l~~t~~ei~~~~~~l~~~l~~~~~~~~~~ 424 (425)
T PRK09264 367 GKIAAEAFENGLIIE-TSGP-EDEVVKLLPP-LTIDEEELEEGLDILEEAVAEVLAEEESK 424 (425)
T ss_pred HHHHHHHHHCCCEEe-ccCC-CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHHHhccccC
Confidence 678888888886553 3221 2357898744 45688999999999999998876665444
No 265
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.36 E-value=1.7e-09 Score=114.49 Aligned_cols=294 Identities=16% Similarity=0.107 Sum_probs=158.4
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-ceEEeccc--chHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA-NLIASPAC--TELE 209 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~-~~vv~~s~--~s~~ 209 (561)
++.+.|+++++.+ ..+|++|||+||..|+..||...... . +..+ +++..... -+..
T Consensus 86 ~l~~~l~~~~~~~-----------~~~~~~sGseA~e~a~klar~~~~~~---~-------~~~~~~ii~~~~~~HG~~~ 144 (403)
T PRK05093 86 RLAKKLIDATFAE-----------RVFFANSGAEANEAAFKLARRYACDR---H-------GPEKTEIIAFHNSFHGRTL 144 (403)
T ss_pred HHHHHHHhhCCCC-----------EEEEeCchHHHHHHHHHHHHHHHhhc---C-------CCCCCeEEEEcCCcCCchh
Confidence 4455566665543 45899999999999999998764211 0 0012 23333322 2222
Q ss_pred HHHHhcc------------CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHHH
Q psy9807 210 VVMLDWL------------GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIGQ 273 (561)
Q Consensus 210 kaa~~~g------------~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~~ 273 (561)
-+..+.+ ..+..+| ..|++.+++.+.+ .+.+|++.-.....|.+.| +++|.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~l~~--------~~aaiiiep~~~~gg~~~~~~~~l~~l~~ 212 (403)
T PRK05093 145 FTVSVGGQPKYSDGFGPKPADITHVP----FNDLAAVKAVIDD--------HTCAVVVEPIQGEGGVIPATPEFLQGLRE 212 (403)
T ss_pred hhHhhcCChhhhhcCCCCCCCcEEeC----CCCHHHHHHHhcC--------CeEEEEEecccCCCCCccCCHHHHHHHHH
Confidence 2222211 1233343 4478899888855 4667777755555565544 999999
Q ss_pred HHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
+|++||+++++|.+|.+.............++ ..|.+ ++.|.++.-+..|.++.++. .. ..+... ...
T Consensus 213 l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~--s~sK~l~~G~rig~vv~~~~-i~-~~l~~~---~~~---- 280 (403)
T PRK05093 213 LCDQHNALLIFDEVQTGMGRTGDLFAYMHYGV-TPDIL--TSAKALGGGFPIGAMLTTAE-IA-SHFKVG---THG---- 280 (403)
T ss_pred HHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCCEE--EecccccCCcceEEEEEcHH-HH-hhcCCC---CCC----
Confidence 99999999999999986322111000001122 24644 45799884345777776442 22 222110 000
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeccc-cccceeeecccCccc
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVIYEV-LMGLVCFRLKHWQIP 431 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~~~-~~~~v~f~~~~~~~~ 431 (561)
.+. ..-+........+++.+-. .++.++..+..+++.+.|+++. .+.++..+ ..++..
T Consensus 281 -------~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~--------- 340 (403)
T PRK05093 281 -------STY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLI--------- 340 (403)
T ss_pred -------CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEE---------
Confidence 000 0111112222233333322 3455677778888888887751 11111111 112211
Q ss_pred cccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC-cHHHHHHHHHHHhCC
Q psy9807 432 LGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP-NEINEKLLKRINGNG 510 (561)
Q Consensus 432 ~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~-~~~~~~l~~~L~~~g 510 (561)
.+.+.+. .....++...+.+.|
T Consensus 341 ---------------------------------------------------------~~~l~~~~~~~~~~~~~~l~~~G 363 (403)
T PRK05093 341 ---------------------------------------------------------GAELKPQYKGRARDFLNAAAEEG 363 (403)
T ss_pred ---------------------------------------------------------EEEecCcchhHHHHHHHHHHHCC
Confidence 1111111 123457888888888
Q ss_pred cEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 511 KIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 511 ~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.+. .+ .|..++|+++.. ..++++|+++++.|.++..++
T Consensus 364 v~v-~~---~g~~~lRl~~~~-~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 364 VMV-LV---AGPDVLRFAPSL-VIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred eEE-ec---CCCCEEEEeCCC-CCCHHHHHHHHHHHHHHHHHh
Confidence 544 33 244689998554 447889999999998877553
No 266
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.36 E-value=5.7e-10 Score=119.10 Aligned_cols=184 Identities=14% Similarity=0.080 Sum_probs=118.7
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
..++-+.+.+++.+.+|....+ .....++|+|+|.++...+.+..+ + ++.+++....
T Consensus 97 ~~~LR~aiA~~l~~~~~~~~~v-----~p~~Ivit~G~t~al~~l~~~l~~----------p-------GD~Vlv~~P~Y 154 (447)
T PLN02607 97 LKSFRQAMASFMEQIRGGKARF-----DPDRIVLTAGATAANELLTFILAD----------P-------GDALLVPTPYY 154 (447)
T ss_pred hHHHHHHHHHHHHHhcCCCCCc-----CHHHeEEcCChHHHHHHHHHHhCC----------C-------CCEEEEcCCCC
Confidence 3467777888888877631110 012578899988887554433211 1 2234444444
Q ss_pred chHHHHHH-hccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhc
Q psy9807 206 TELEVVML-DWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQK 278 (561)
Q Consensus 206 ~s~~kaa~-~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~ 278 (561)
..+..... ..|++++.|+. +++.+|++++++++.+ ..+.|.++.+|+.+...+.+|.+-| +++|.++|++|
T Consensus 155 ~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~--a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~ 232 (447)
T PLN02607 155 PGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQE--AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK 232 (447)
T ss_pred cchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHH--HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC
Confidence 34444444 46788888887 2356999999999987 6666777888888888899998865 78888899999
Q ss_pred CceEEechhcccccccCccccccc---cCc------cccceeeecCCccccccc-cceeEEecChhh
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYLM---KGV------ELADSFNFNPHKWMLVTF-DCSAMWLKDPSW 335 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~~---~gi------~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~ 335 (561)
|+++++|.+|+....-.+...... ... ++. .+..++.|-++.|. =.|+++..+...
T Consensus 233 ~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~~l 298 (447)
T PLN02607 233 NIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERV-HIVYSLSKDLGLPGFRVGTIYSYNDKV 298 (447)
T ss_pred CCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcE-EEEEcchhcCCCCcceEEEEEEcCHHH
Confidence 999999999986433221111111 111 111 45679999998664 467777655433
No 267
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.35 E-value=9.5e-10 Score=115.99 Aligned_cols=202 Identities=13% Similarity=0.002 Sum_probs=121.1
Q ss_pred HHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q psy9807 104 AIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRV 183 (561)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~ 183 (561)
..+.+.+...+. ....|.......++-+.+.+|+.+..|.+... +.....++|+|++++...++.+..+.
T Consensus 44 ~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~----~~~~~i~it~Ga~~al~~~~~~l~~~----- 113 (393)
T TIGR03538 44 AFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGV----DPERHVLPVNGTREALFAFAQAVINP----- 113 (393)
T ss_pred HHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccC----CCCceEEECCCcHHHHHHHHHHHcCC-----
Confidence 334444444433 22334333335678888999998887775210 00013677888888876554432110
Q ss_pred HhcCCCCCCcccccc--eEEecccch-HHHHHHhccCCeEEeeC-CC--CccChhhHHHHHhhhchhhcCCceEEEEEec
Q psy9807 184 KEAHPDWKDSDIIAN--LIASPACTE-LEVVMLDWLGKMLDLPK-EF--LACSGGKGGGVIQRKSDREMCSDLLQVVATL 257 (561)
Q Consensus 184 ~~~~~~~~~~~~~~~--~vv~~s~~s-~~kaa~~~g~~v~~v~~-~~--g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~ 257 (561)
++. +++....|. ....++..|.+++.+|+ .+ +.+|+++|++++.+ .+.+|+.+.
T Consensus 114 ------------gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~--------~~k~i~l~~ 173 (393)
T TIGR03538 114 ------------GQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR--------RCQLLFVCS 173 (393)
T ss_pred ------------CCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh--------cceEEEEeC
Confidence 122 333222343 44556788999999998 33 46889999988765 456677778
Q ss_pred CCCCCccccC---HHHHHHHHhhcCceEEechhcccccccCc-ccccc---ccCcc--c--cceeeecCCcccccc-ccc
Q psy9807 258 GTTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICP-ENRYL---MKGVE--L--ADSFNFNPHKWMLVT-FDC 325 (561)
Q Consensus 258 gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~-~~~~~---~~gi~--~--aDsi~~~~HK~l~~P-~g~ 325 (561)
..+.||.+-+ +++|+++|++||+++++|.+|.-...-.. ..... ..... . --.+..++.|.++.| .-+
T Consensus 174 p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRv 253 (393)
T TIGR03538 174 PGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRS 253 (393)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccce
Confidence 8899998876 78889999999999999999874321100 00000 00010 0 026788999976555 345
Q ss_pred eeEEecChhhH
Q psy9807 326 SAMWLKDPSWV 336 (561)
Q Consensus 326 g~l~~r~~~~l 336 (561)
|.++. +...+
T Consensus 254 G~~i~-~~~l~ 263 (393)
T TIGR03538 254 GFVAG-DAEIL 263 (393)
T ss_pred EEEec-CHHHH
Confidence 66554 44433
No 268
>PRK07049 methionine gamma-lyase; Validated
Probab=99.35 E-value=3.3e-10 Score=120.10 Aligned_cols=226 Identities=12% Similarity=0.103 Sum_probs=142.7
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|....+|+.+ +++.|.+ ..++++||+.|+..++.+..+. ++.+++
T Consensus 80 ~~~Pt~~~Le~~l----A~leg~~-----------~~iv~~sG~~Ai~~~l~al~~~-----------------Gd~Vv~ 127 (427)
T PRK07049 80 FNHPNSEIVEDRL----AVYEGAE-----------SAALFSSGMSAIATTLLAFVRP-----------------GDVILH 127 (427)
T ss_pred CCCcCHHHHHHHH----HHHhCCC-----------cEEEEccHHHHHHHHHHHHhCC-----------------CCEEEE
Confidence 3457777777755 6666643 4689999998876665543211 123443
Q ss_pred ecccch-HHH----HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 202 SPACTE-LEV----VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 202 ~~s~~s-~~k----aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
....|. ... .+...|++++.++. ..|.++|++.|.+ ..... .+.+|++...++.+|.+-|+++|.++++
T Consensus 128 ~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~---~~d~~~l~~~l~~--~~~~~-~tklv~lesP~NPtg~v~d~~~l~~la~ 201 (427)
T PRK07049 128 SQPLYGGTETLLAKTFRNFGVGAVGFAD---GLSEAAIGAAAEA--AAAKG-RVSLILIETPANPTNSLVDVAAVRRVAD 201 (427)
T ss_pred cCCCcccHHHHHHHHHHhcCcEEEEEeC---CCCHHHHHHHHHh--hccCC-CceEEEEECCCCCCCcccCHHHHHHHHH
Confidence 332232 222 23345676655552 2577888888864 32222 5678888889999999999999999998
Q ss_pred h------cCceEEechhcccccccCccccccccCccccceeeecCCccccc-cccceeEEecChhhHHHhhccCCCcccc
Q psy9807 277 Q------KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV-TFDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 277 ~------~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~-P~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
. ++++++||.+|.+.....| +. ..+|.+..+++|.+++ |--.+.+++.+++...........+
T Consensus 202 ~~~~~~~~~~~vvvDety~~~~~~~p----l~---~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~--- 271 (427)
T PRK07049 202 AIEARQGHRPIIACDNTLLGPVFQKP----LE---HGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAI--- 271 (427)
T ss_pred HhhhcccCCCEEEEECCccccccCCc----cc---cCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhc---
Confidence 8 8999999999875432221 11 1359999999999994 4333344444544332221111110
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+........|+.++.+. .+..++++..+++..+.+.|+++|+++-+
T Consensus 272 ----------------g~~ls~~~a~l~~r~L~--tl~~R~~~~~~~a~~la~~L~~~p~V~~v 317 (427)
T PRK07049 272 ----------------GTQLDPHSCWMLGRSLE--TLVLRMERANRNARAVAEFLRDHPKVEKL 317 (427)
T ss_pred ----------------CCCCCHHHHHHHHcCCC--hHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 11123455666666553 47778888899999999999999987643
No 269
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.34 E-value=1.6e-10 Score=116.78 Aligned_cols=226 Identities=17% Similarity=0.145 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh-HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS-EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT-~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
..|-+.++.-+-+.+|++.. ...+.++-+| |+...++.+.| .. + ..+.|++..-
T Consensus 55 ~~ltn~l~~d~~~~~G~~~~--------~~~~~vP~atgm~l~l~l~~l~-~r-~--------------~a~~Viw~rid 110 (389)
T PF05889_consen 55 AKLTNSLVLDALRLAGLRSV--------KSCFVVPMATGMSLTLCLLALR-MR-P--------------KAKYVIWPRID 110 (389)
T ss_dssp HHHHHHHHHHHHHHTTHTTH--------CEEEEESS-HHHHHHHHHHHHH-HH-C--------------T--EEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCccc--------cceEEEecccccHHHHHHHHHh-cc-c--------------CCceEEEeecc
Confidence 34555555556677899854 2356676666 55556666665 21 0 1245665554
Q ss_pred -chHHHHHHhccCCeEEeeC----CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc-CHHHHHHHHhhcC
Q psy9807 206 -TELEVVMLDWLGKMLDLPK----EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD-CLEEIGQVCRQKD 279 (561)
Q Consensus 206 -~s~~kaa~~~g~~v~~v~~----~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id-pl~eI~~ia~~~~ 279 (561)
+|-.|++...|.+++.||. +.-..|.+.+++++++ .|..+.+.+.|+-+...|-.- ++.+|+++|++||
T Consensus 111 qkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~-----~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~ 185 (389)
T PF05889_consen 111 QKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEE-----LGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYD 185 (389)
T ss_dssp THHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHH-----HCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT
T ss_pred ccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHH-----hCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcC
Confidence 8989999999999999997 3346678888998866 244667777777777777664 5999999999999
Q ss_pred ceEEechhcccccccCcccccccc---CccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCC
Q psy9807 280 VWLHVDAAYAGSAFICPENRYLMK---GVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAP 356 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~---gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (561)
+...|.+|||.- +....+.++ ...+.|.++-+.-|-|.+|.|-+.+...++..+...-. .|-
T Consensus 186 IPhlvNnAYgvQ---~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~---~Yp--------- 250 (389)
T PF05889_consen 186 IPHLVNNAYGVQ---SSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSK---EYP--------- 250 (389)
T ss_dssp --EEEEGTTTTT----HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHH---TSH---------
T ss_pred CceEEccchhhh---HHHHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHH---Hhh---------
Confidence 999999999941 111111111 12456999999999999999999998887765543221 231
Q ss_pred CCCcccccCcCC--cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy9807 357 DYRHWQIPLGRR--FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS 406 (561)
Q Consensus 357 ~~~~~~~~~sr~--~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 406 (561)
+|- -..+-+..++..+|..|+...+....++-.++.++|++
T Consensus 251 ---------GRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~ 293 (389)
T PF05889_consen 251 ---------GRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKK 293 (389)
T ss_dssp ---------SHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------hhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 13466788899999999999999999999999998875
No 270
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.34 E-value=2.5e-09 Score=115.39 Aligned_cols=328 Identities=10% Similarity=-0.000 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
+.+.++.+.|.+++.-.+. ...+|++|||+||..|+.+||...... +.+ ...+++.+... -
T Consensus 133 ~~~~~lae~L~~~~~~~~~--------~~v~f~~SGsEA~e~AlKlAr~~~~~~---g~~------~r~~iI~~~~~yHG 195 (504)
T PLN02760 133 KPSLDLAKELLEMFTARKM--------GKVFFTNSGSEANDTQVKLVWYYNNAL---GRP------NKKKFIARSKSYHG 195 (504)
T ss_pred HHHHHHHHHHHhhcCCCCC--------CEEEEeCChHHHHHHHHHHHHHHHHhc---CCC------CCcEEEEECCCccC
Confidence 4445555566666431110 246889999999999999998653110 000 01244544433 2
Q ss_pred hHHHHHHhccCC------------eEEeeC-CCCc-------------cChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 207 ELEVVMLDWLGK------------MLDLPK-EFLA-------------CSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 207 s~~kaa~~~g~~------------v~~v~~-~~g~-------------~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
+..-+..+.+.. +..++. ...+ ...++|++.|.+ . .+..+.+|++.-...
T Consensus 196 ~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~--~--~~~~iAAvI~EPv~g 271 (504)
T PLN02760 196 STLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILK--E--GPETIAAFIAEPVMG 271 (504)
T ss_pred ChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHh--c--CCCceEEEEECCccC
Confidence 222233333321 222332 1111 112456666643 1 123567788877777
Q ss_pred CCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhh
Q psy9807 261 NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSW 335 (561)
Q Consensus 261 ~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~ 335 (561)
..|.+-| +++|.++|++||+.+++|.++.|......-+..-..++ ..|.+++ -|.++.=+ +.|+++.++.
T Consensus 272 ~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv-~PDivtl--gK~lggG~~PigAv~~~~~-- 346 (504)
T PLN02760 272 AGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI-KPDLVSL--AKALSSAYMPIGAVLVSPE-- 346 (504)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC-CCcEEEe--cccccCCccccceEeecHH--
Confidence 7898988 99999999999999999999966544443222222344 3786555 89887532 3566666542
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
+...+....... + .+....+-....+...++++.+..-.-++++++..++.++|++.|++.....++..
T Consensus 347 i~d~~~~~~~~~-----~------~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~ 415 (504)
T PLN02760 347 ISDVIHSQSNKL-----G------SFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGE 415 (504)
T ss_pred HHhhhhcccccc-----c------CcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCeee
Confidence 222232110000 0 00000111123333333443333222235678888899999998886422222111
Q ss_pred c-ccc-ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecC
Q psy9807 416 V-LMG-LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLK 493 (561)
Q Consensus 416 ~-~~~-~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~ 493 (561)
. ..+ ++.+.+.+... .. -.+ .
T Consensus 416 vrG~Gl~~gie~~~~~~--~~-----------------------------------------------------~~~--~ 438 (504)
T PLN02760 416 IRGTGLILGTEFVDNKS--PN-----------------------------------------------------DPF--P 438 (504)
T ss_pred EEeCceEEEEEEecCCc--cc-----------------------------------------------------ccc--c
Confidence 1 001 11111110000 00 000 0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 494 GPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 494 ~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
....+...+.+.+.+.|.+... .+ ..+|++.. ...+++||++++++++++.+++.+.
T Consensus 439 ~~~~~~~~i~~~~~~~Gvl~~~----~g-~~lrl~Pp-l~it~eeid~~~~~l~~al~~~~~~ 495 (504)
T PLN02760 439 AEWGVGAYFGAECKKRGMLVRV----AG-DNIMMSPP-LIITPEEVDELISIYGKALKATEER 495 (504)
T ss_pred chhHHHHHHHHHHHhCCcEEEe----cC-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0112355678888888865432 22 36898744 4568899999999999998887543
No 271
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.34 E-value=8.8e-10 Score=116.36 Aligned_cols=201 Identities=10% Similarity=-0.024 Sum_probs=122.2
Q ss_pred HHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCC-ccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q psy9807 105 IVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLP-KEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRV 183 (561)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~ 183 (561)
.+.+.+...++ ....|.......++-+.+.+|+.+..|++ -+. ....++|+|++++...++.+..+.
T Consensus 46 ~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~------~~~i~it~G~~~al~~~~~~l~~~----- 113 (396)
T PRK09147 46 FIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP------ATQVLPVNGSREALFAFAQTVIDR----- 113 (396)
T ss_pred HHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc------cceEEECCChHHHHHHHHHHHcCC-----
Confidence 34444444443 23344444445678888999998888865 110 014677888888875554432110
Q ss_pred HhcCCCCCCcccccceEEecccc-hHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 184 KEAHPDWKDSDIIANLIASPACT-ELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 184 ~~~~~~~~~~~~~~~~vv~~s~~-s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
++.++.+++....| ....+++..|.+++.||+ . ++.+|+++|++.+.+ .+.+++.+...
T Consensus 114 ---------~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~--------~~k~i~l~nP~ 176 (396)
T PRK09147 114 ---------DGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA--------RTQLLFVCSPG 176 (396)
T ss_pred ---------CCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhh--------ccEEEEEcCCC
Confidence 00012344443334 455567788999999998 3 357999999887755 45667777788
Q ss_pred CCCcccc---CHHHHHHHHhhcCceEEechhcccccccCcccc--cccc---Cc--ccc--ceeeecCCcccccc-ccce
Q psy9807 260 TNCCAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENR--YLMK---GV--ELA--DSFNFNPHKWMLVT-FDCS 326 (561)
Q Consensus 260 t~tG~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~--~~~~---gi--~~a--Dsi~~~~HK~l~~P-~g~g 326 (561)
+.||.+- .+++|+++|++|++|+++|.+|+-... ..... .... .. ... -.+..++.|.++.| .-+|
T Consensus 177 NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG 255 (396)
T PRK09147 177 NPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYF-DEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSG 255 (396)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCeEEEeecccccccc-CCCCCCchhhhhccccCccccccEEEEeccccccCCccceee
Confidence 8899885 677788889999999999999985322 11100 0010 01 001 26778999976656 4466
Q ss_pred eEEecChhhH
Q psy9807 327 AMWLKDPSWV 336 (561)
Q Consensus 327 ~l~~r~~~~l 336 (561)
.++. ++..+
T Consensus 256 ~~~~-~~~l~ 264 (396)
T PRK09147 256 FVAG-DAALL 264 (396)
T ss_pred eecC-CHHHH
Confidence 6554 44333
No 272
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.34 E-value=1.4e-09 Score=113.95 Aligned_cols=178 Identities=7% Similarity=-0.012 Sum_probs=111.8
Q ss_pred hhhHHHHHHHHHHHHHhcC----CCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-ce
Q psy9807 125 PACTELEVVMLDWLGKMLD----LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA-NL 199 (561)
Q Consensus 125 p~~~~lE~~~~~~la~l~g----~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~-~~ 199 (561)
+...++.+.+.+|+.+..| .+++ ..++|+|++++...++.+.... ++ .+
T Consensus 66 ~G~~~Lr~aia~~~~~~~~~~~~v~~~---------~I~it~Ga~~al~~~~~~~~~~-----------------g~~~V 119 (374)
T PRK02610 66 GGHEALKQAIAEYVNESAAGSSQITPA---------NISVGNGSDELIRSLLIATCLG-----------------GEGSI 119 (374)
T ss_pred CchHHHHHHHHHHhCccccccCCCCHH---------HEEEcCChHHHHHHHHHHHcCC-----------------CCCeE
Confidence 4556788888888877643 3332 5788888888875544432110 11 34
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
++.... .....+++..|.+++.+|. . ++.+|+++|++++.+ .. ..++.+|+++...+.||.+-+.+++.++.+
T Consensus 120 lv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~--~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~ 195 (374)
T PRK02610 120 LVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQ--TQ--NPPVRVVFVVHPNSPTGNPLTAAELEWLRS 195 (374)
T ss_pred EEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHh--hc--CCCceEEEEeCCCCCCCCCCCHHHHHHHHh
Confidence 444444 4555667888999999998 3 579999999998863 11 124667777777888999987777666643
Q ss_pred -hcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeEEecChhhH
Q psy9807 277 -QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPSWV 336 (561)
Q Consensus 277 -~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l 336 (561)
.+|+|+++|.+|.-... .+.... +..... -.+..++.|.++.|.- +|.++. +...+
T Consensus 196 ~~~~~~iI~De~Y~~~~~-~~~~~~-~~~~~~-~ivi~SfSK~~g~~GlRiG~~v~-~~~l~ 253 (374)
T PRK02610 196 LPEDILVVIDEAYFEFSQ-TTLVGE-LAQHPN-WVILRTFSKAFRLAAHRVGYAIG-HPELI 253 (374)
T ss_pred ccCCcEEEEeccccccCc-cchHHH-HhcCCC-EEEEEecchhccCcccceeeeec-CHHHH
Confidence 24899999999874321 110111 111111 2567899999976644 565554 54444
No 273
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.32 E-value=3.8e-09 Score=112.87 Aligned_cols=308 Identities=11% Similarity=0.041 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.|++++.-.. ....|++|||+||-.|+..||.....+ + ..+++.+...
T Consensus 124 ~~~~~lae~L~~~~p~~~---------~~v~f~~SGsEAve~AlklAr~~t~~~----g--------r~~ii~~~~~yHG 182 (459)
T PRK11522 124 PLRAMLAKTLAALTPGKL---------KYSFFCNSGTESVEAALKLAKAYQSPR----G--------KFTFIATSGAFHG 182 (459)
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEeCCchHHHHHHHHHHHHHhccC----C--------CcEEEEecCCCCC
Confidence 344555666677653211 146899999999999999998763110 0 1134444332
Q ss_pred chHHHHHHhccC------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HH
Q psy9807 206 TELEVVMLDWLG------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LE 269 (561)
Q Consensus 206 ~s~~kaa~~~g~------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~ 269 (561)
.+.. +..+.+. .+..+| ..|.+++++.|++ ....+..+.+|++.-...+.|.+-| |+
T Consensus 183 ~t~~-~ls~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~l~~--~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~ 255 (459)
T PRK11522 183 KSLG-ALSATAKSTFRKPFMPLLPGFRHVP----FGNIEAMRTALSE--CKKTGDDVAAVILEPIQGEGGVILPPEGYLT 255 (459)
T ss_pred CcHH-HhhhcCCcccccCCCCCCCCCcccC----CCCHHHHHHHHHH--hhccCCcEEEEEEecccCCCCCccCCHHHHH
Confidence 2221 1111111 122233 2367889998875 4333446778888888888899888 99
Q ss_pred HHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccc
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLK 348 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~ 348 (561)
++.++|++||+.+++|.++.|......-+..-..|+ ..|.++ ..|.|+.- +++|+++.++. .. ..+... ++..
T Consensus 256 ~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt--~gK~lggG~~Pigav~~~~~-i~-~~~~~~-~~~~ 329 (459)
T PRK11522 256 AVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENV-QPDILC--LAKALGGGVMPIGATIATEE-VF-SVLFDN-PFLH 329 (459)
T ss_pred HHHHHHHHcCCEEEeccceecCCccchhhhhhccCC-CCCEEE--echhhhCCCccceeEEEcHH-HH-HHhccC-Cccc
Confidence 999999999999999999876432222111111234 468774 48998864 35777777643 22 222211 1211
Q ss_pred cCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeE-Eeccc-cccceeeec
Q psy9807 349 HDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFE-VIYEV-LMGLVCFRL 425 (561)
Q Consensus 349 ~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~-l~~~~-~~~~v~f~~ 425 (561)
... + .+-+..+....++++.+-.+ +..++..++.++|.+.|+++. ++. ++... ..+.+
T Consensus 330 ~~T------~------~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~---- 390 (459)
T PRK11522 330 TTT------F------GGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGML---- 390 (459)
T ss_pred CCC------C------CCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeE----
Confidence 100 0 01111222333445555443 456788888889998887641 121 11111 01110
Q ss_pred ccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHH
Q psy9807 426 KHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKR 505 (561)
Q Consensus 426 ~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~ 505 (561)
+.+.+. .++....+.+.
T Consensus 391 --------------------------------------------------------------~giel~-~~~~~~~i~~~ 407 (459)
T PRK11522 391 --------------------------------------------------------------MAIEFV-DNEIGYNFASE 407 (459)
T ss_pred --------------------------------------------------------------EEEEec-CchHHHHHHHH
Confidence 111111 12334567888
Q ss_pred HHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 506 INGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 506 L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
+.+.|.+ +.++. .+..++|++.. ...+++||+++++++.++.+++.+
T Consensus 408 l~~~Gvl-~~~~~-~~~~~lr~~Pp-l~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 408 MFRQRVL-VAGTL-NNAKTIRIEPP-LTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred HHHCCeE-EEecC-CCCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 8888744 44432 24468999865 456888999999999998877543
No 274
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.30 E-value=1e-09 Score=114.96 Aligned_cols=149 Identities=15% Similarity=0.138 Sum_probs=92.0
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHHHHhccCCeE------EeeC-CC-C
Q psy9807 158 GVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVVMLDWLGKML------DLPK-EF-L 227 (561)
Q Consensus 158 g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~kaa~~~g~~v~------~v~~-~~-g 227 (561)
.+|++|||+||..|+..+|.... .+++++.... .+...++...+.... .++. .. -
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~~~---------------~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKATG---------------KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI 151 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHhcC---------------CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC
Confidence 58999999999999999875410 1234443332 333334433332111 0111 11 1
Q ss_pred ccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHHHHHhhcCceEEechhcccccccCcccccccc
Q psy9807 228 ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMK 303 (561)
Q Consensus 228 ~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~ 303 (561)
..|+++|++.+.+ ...+|+.....+.+|.+-| |++|.++|+++|+++++|++|.+.......+.....
T Consensus 152 ~~dl~~l~~~l~~--------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~ 223 (375)
T PRK04260 152 FNDLNSVKALVNK--------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHY 223 (375)
T ss_pred CCCHHHHHHhcCC--------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhh
Confidence 3588999988755 3557777777777787754 899999999999999999999753221111111112
Q ss_pred CccccceeeecCCccccccccceeEEecC
Q psy9807 304 GVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 304 gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
++ ..|.+ ++.|.++.-+..|.++.++
T Consensus 224 ~~-~pdi~--t~sK~l~~G~~ig~~~~~~ 249 (375)
T PRK04260 224 GI-EPDIF--TLAKGLANGVPVGAMLAKS 249 (375)
T ss_pred CC-CCCEE--EecccccCCcceEEEEEcH
Confidence 33 34644 6799987445578888864
No 275
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.30 E-value=3.5e-09 Score=113.05 Aligned_cols=308 Identities=14% Similarity=0.048 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
+.+.++.+.|+++++ +. ....+|++|||+||..|+..||.... .++++.+... -
T Consensus 86 ~~~~~la~~L~~~~~--~~-------~~~v~f~~SGseA~e~AlklAr~~tg---------------r~~ii~~~~~yHG 141 (433)
T PRK08117 86 ESILKLAEELAEITP--GG-------LDCFFFSNSGAEAIEGALKLAKHVTK---------------RPYIISFTGCFHG 141 (433)
T ss_pred HHHHHHHHHHHHhCC--CC-------CCEEEEeCcHHHHHHHHHHHHHHhcC---------------CCeEEEECCCcCC
Confidence 344555566677662 11 01457889999999999999986520 1234444332 1
Q ss_pred hHHHHHHhcc-------------CCeEEeeC-CCCc------------cChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 207 ELEVVMLDWL-------------GKMLDLPK-EFLA------------CSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 207 s~~kaa~~~g-------------~~v~~v~~-~~g~------------~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
+..-+..+.+ ..+..+|. ...+ .|+++|++.+++ .. .+..+.+|++.-...
T Consensus 142 ~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~-~~~~~aavi~Epi~~ 218 (433)
T PRK08117 142 RTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKH--QV-TPEEVAAVIIEPVLG 218 (433)
T ss_pred cCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHh--cc-CCCcEEEEEECCeeC
Confidence 1111111111 12344444 2111 256677777653 21 123577888888888
Q ss_pred CCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhH
Q psy9807 261 NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWV 336 (561)
Q Consensus 261 ~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l 336 (561)
+.|.+-| +++|.++|++||+.+++|.+|+|.......+.....++ ..|. .++.|.++.=+..|++..++. ..
T Consensus 219 ~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~pDi--~t~sK~lg~G~pigav~~~~~-i~ 294 (433)
T PRK08117 219 EGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-VPDI--MTIAKGIASGLPLSAVVASKE-LM 294 (433)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-CCCE--eehhhhccCCCcceeEEEcHH-HH
Confidence 8899988 99999999999999999999986322211110001122 2465 467999985455777777542 22
Q ss_pred HHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecc
Q psy9807 337 VNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVIYE 415 (561)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~~ 415 (561)
..+... .+ +. +-....+...+++..+....-+.+.++..++.+++++.|+++. .+.++..
T Consensus 295 -~~~~~~-~~------~~-----------T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~ 355 (433)
T PRK08117 295 -EQWPLG-SH------GT-----------TFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGD 355 (433)
T ss_pred -hhccCC-CC------CC-----------CCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCceee
Confidence 222110 00 00 0011233333333333221122456677777888888887641 1111111
Q ss_pred -ccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecC-
Q psy9807 416 -VLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLK- 493 (561)
Q Consensus 416 -~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~- 493 (561)
+..+++. + +.|...
T Consensus 356 vrg~Gl~~----------g------------------------------------------------------i~~~~~~ 371 (433)
T PRK08117 356 VRGIGLMI----------G------------------------------------------------------IEIVDPD 371 (433)
T ss_pred eecCCcEE----------E------------------------------------------------------EEEecCC
Confidence 1111110 0 111100
Q ss_pred --CCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 494 --GPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 494 --~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+.......+.+.+.+.|.++.. .. .+..++|++.. ..+++++|+++++.|.++.+++
T Consensus 372 ~~~~~~~~~~~~~~l~~~Gv~~~~-~g-~~~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 372 GEPDGDAVEKILDKCLEKGLLFYL-CG-NAGNVLRMIPP-LTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred CCcchHHHHHHHHHHHHCCCEEee-cC-CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 1123455678888888866533 21 12458999855 4558889999999999887765
No 276
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.29 E-value=1.8e-09 Score=111.84 Aligned_cols=289 Identities=13% Similarity=0.115 Sum_probs=147.0
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHh---hccc-cccccccChhhHHHHHHHH
Q psy9807 60 ETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSD---SIAC-IGFTWIASPACTELEVVML 135 (561)
Q Consensus 60 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~---~~n~-~~~~~~~sp~~~~lE~~~~ 135 (561)
..+|+. .+-.+++..+.+....+.. ...|+|--...--.|+++...+.+ .+.. ..+.-+.|...-+.--+..
T Consensus 41 ~~lp~~-~sE~e~~r~~~~la~kN~~---~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Q 116 (429)
T PF02347_consen 41 LNLPEP-LSEYELLRHLERLASKNKS---YTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQ 116 (429)
T ss_dssp ---------HHHHHHHHHHHHTTS-----TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHH
T ss_pred CCCCCC-CCHHHHHHHHHHHHhcCCC---CCccccccccCceeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHH
Confidence 344443 6778999999887654433 444555443344456666652322 1111 1112234555556666788
Q ss_pred HHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch---HHHH
Q psy9807 136 DWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE---LEVV 211 (561)
Q Consensus 136 ~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s---~~ka 211 (561)
.+++++.|++-. ..-+..++|.+--.++++.|.... + ..++++..+. .. +.+.
T Consensus 117 s~i~eLTGmdva---------NaSlyd~atA~aEa~~ma~r~~~~-~-------------~~~vlv~~~~hP~~~~v~~t 173 (429)
T PF02347_consen 117 SMICELTGMDVA---------NASLYDGATAAAEAMLMAVRATKR-K-------------RNKVLVPESLHPQTRAVLRT 173 (429)
T ss_dssp HHHHHHHTSSEE----------SEBSSCCHHHHHHHHHHHHHHTT-----------------EEEEETTS-CHHHHHHHH
T ss_pred HHHHHhhCCCcc---------CCCCCChhHHHHHHHHHHHHhccc-C-------------CcEEEEcCCcChhhHHHHHH
Confidence 899999999853 234555555443333333332210 0 1245555554 22 2222
Q ss_pred -HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 212 -MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 212 -a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
+...|.+++.+|. +++..| .+ ....|+++. .+..|.+.++++|++++|++|..+.+ +|--
T Consensus 174 ~a~~~g~~iv~~~~~~~~~~d--------~~--------~~a~v~vq~-Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~ 235 (429)
T PF02347_consen 174 YAAPLGIEIVEVPLDEDGTTD--------DD--------DTAAVMVQN-PNTFGVFEDIKEIADIAHAAGALVIV-GADP 235 (429)
T ss_dssp HCCHCCEEEEEE-BBTTCSB---------ST--------TEEEEEEES-S-TTSB--THHHHHHHHHHTT-EEEE-CGGC
T ss_pred hhhhCCeEEEEecccccCCcc--------cc--------CeEEEEeec-CCCCceEeeHHHHHHHHHHcCCEEEE-ecCH
Confidence 2335678888888 666766 33 355566655 55679999999999999999999888 6632
Q ss_pred c--ccccCccccccccCccccceeeecCCcccccccc-----ceeEEecChhhHHHhhccCCCccccC--CCCCCCCCCc
Q psy9807 290 G--SAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-----CSAMWLKDPSWVVNAFNVDPLYLKHD--QQGSAPDYRH 360 (561)
Q Consensus 290 g--~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-----~g~l~~r~~~~l~~~~~~~~~yl~~~--~~~~~~~~~~ 360 (561)
. +.+..| |--.||.+ ++-||.|+.|.+ +|++.+|+. +. ..-|.-+-.. +..+...+ .
T Consensus 236 ~aL~~l~~P-------ge~GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~--l~---r~lPGRiVG~t~D~~G~~~~-~ 301 (429)
T PF02347_consen 236 NALGGLKSP-------GEYGADIV-VGEHQTFGIPMGFGGPGAGFFAVRED--LV---RQLPGRIVGQTKDADGKRAF-V 301 (429)
T ss_dssp CGCCTC--G-------GGGT-SEE-EECCTTTT---CCC-S--EEEEE-GG--GG---GGS-S-EEEEEEBCCCSCCE-E
T ss_pred HHHhCcCCh-------hhcCccEE-eeCCCCCcccCCCCCCCeeeEEEhhh--hh---hhCCCceeccccccccccee-e
Confidence 1 122223 22256999 666999998864 667777764 21 2222222210 11111111 0
Q ss_pred ccccC----cCCc------------chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 361 WQIPL----GRRF------------RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 361 ~~~~~----sr~~------------~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
.+++. -||- -++..+.-+.++|.+|++++.++...+|.|+++.|++.
T Consensus 302 ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 302 LTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp EE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred eccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111 1121 13455677788999999999999999999999999987
No 277
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.29 E-value=1e-09 Score=114.58 Aligned_cols=235 Identities=11% Similarity=0.003 Sum_probs=129.7
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCC-ccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLP-KEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
.|.......++.+.+.+|+.+..|.+ -+ ....++|+|++++...++.+.. .. + ++.
T Consensus 57 ~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~-------~~~I~it~G~~~~i~~~~~~l~---~~------~-------gd~ 113 (364)
T PRK07865 57 GYPTTAGTPELREAIVGWLARRRGVTGLD-------PAAVLPVIGSKELVAWLPTLLG---LG------P-------GDV 113 (364)
T ss_pred CCCCccCCHHHHHHHHHHHHHHcCCCCCC-------cccEEEccChHHHHHHHHHHHc---CC------C-------CCE
Confidence 34444445688899999999988764 21 1267888888887654333210 00 0 123
Q ss_pred eEEeccc-chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHHH
Q psy9807 199 LIASPAC-TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQV 274 (561)
Q Consensus 199 ~vv~~s~-~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~i 274 (561)
+++.... .+...++...|.+++.++ ++++++. . .+.+|+.+...+.||.+- .+++|.++
T Consensus 114 Vl~~~p~y~~~~~~~~~~g~~~~~~~------~~~~l~~---~--------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~ 176 (364)
T PRK07865 114 VVIPELAYPTYEVGARLAGATVVRAD------SLTELGP---Q--------RPALIWLNSPSNPTGRVLGVDHLRKVVAW 176 (364)
T ss_pred EEECCCCcccHHHHHHhcCCEEEecC------ChhhCCc---c--------cceEEEEcCCCCCCCccCCHHHHHHHHHH
Confidence 4443333 556666777888877765 2222221 2 456677777788899774 56788899
Q ss_pred HhhcCceEEechhcccccccCcccccc---ccCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYL---MKGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHD 350 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~---~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~ 350 (561)
|++||+++++|.+|+....-.+..... ..+. ..-..++.+++|.++.|..-..+++.++..+....... .+..
T Consensus 177 a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~~-~~~~-- 253 (364)
T PRK07865 177 ARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEVR-KHAG-- 253 (364)
T ss_pred HHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHHHHHH-HhcC--
Confidence 999999999999998532211100000 0010 01137788999998766433334444554443322111 0000
Q ss_pred CCCCCCCCCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 351 QQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
+ ....+...++.+.+. .+.+++..+...+..+.+.+.|++. |+.+..
T Consensus 254 ----------~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 301 (364)
T PRK07865 254 ----------M------MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVDH 301 (364)
T ss_pred ----------C------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccC
Confidence 0 001111122222222 2345556666677777888888875 666543
No 278
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.29 E-value=1e-10 Score=123.26 Aligned_cols=231 Identities=14% Similarity=0.091 Sum_probs=158.9
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++.+..++.||.+.+| +++.|.|.||...+.+.... ++.+++-... .|+..
T Consensus 73 ~eAqe~aA~~fgAd~ty----------FvvNGTS~ank~vi~a~~~~-----------------GD~VLvdRN~HKSi~~ 125 (557)
T COG1982 73 KEAQELAARVFGADHTY----------FVVNGTSTANKAVINAVLTP-----------------GDKVLVDRNCHKSIHH 125 (557)
T ss_pred HHHHHHHHHHhCCCceE----------EEECCccHHHHHHHHhhcCC-----------------CCEEEecCCccHHHHH
Confidence 34455669999998763 66777778887766654221 2344444444 89999
Q ss_pred HHHhccCCeEEeeC--CC-----CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEE
Q psy9807 211 VMLDWLGKMLDLPK--EF-----LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 211 aa~~~g~~v~~v~~--~~-----g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lh 283 (561)
+..+.|+..+.+.+ +. +.++.+.+++++.+ ..... + .++....|..|..-++++|.+.++.+++|+.
T Consensus 126 glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~--~~~~~---k-~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~ 199 (557)
T COG1982 126 GLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLA--HPDAE---K-LAVITNPTYDGVCYNLRKIVELLHHYGAWVL 199 (557)
T ss_pred HHHHcCCceEEecCCCCccccccCCCCHHHHHHHHHh--Chhhh---e-eEEEecCccceEeecHHHHHHHHhhcCceEE
Confidence 98888887666554 32 68999999999877 22110 2 3444568889999999999999999999999
Q ss_pred echhcccccccCccccccccCc-cccceeeecCCccccccccceeEEecCh-----hhHHHhhc----cCCCccccCCCC
Q psy9807 284 VDAAYAGSAFICPENRYLMKGV-ELADSFNFNPHKWMLVTFDCSAMWLKDP-----SWVVNAFN----VDPLYLKHDQQG 353 (561)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~-----~~l~~~~~----~~~~yl~~~~~~ 353 (561)
+|.+|+...-+++..... .. ..+|.++-|.||.+.+-..++++.+++. ..+..++. .+|.|.-
T Consensus 200 ~deah~~~~~~~~~l~~~--~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l----- 272 (557)
T COG1982 200 YDEAHPAHFDFSPMLPES--ALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPL----- 272 (557)
T ss_pred hhhcCcccccccccCcch--hhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHH-----
Confidence 999999877766544331 22 3579999999999999999999999872 33333332 2223311
Q ss_pred CCCCCCcccccCcCCcchHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKL-WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL 417 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~l-w~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~ 417 (561)
+.++-+ -..+...|..-+++.++...+..+++++...++++|+++.+..
T Consensus 273 ---------------~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~ 322 (557)
T COG1982 273 ---------------MASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEK 322 (557)
T ss_pred ---------------HHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccc
Confidence 112222 0111223455556668888999999999999998899987754
No 279
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.27 E-value=1.6e-09 Score=111.38 Aligned_cols=221 Identities=12% Similarity=0.137 Sum_probs=144.4
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
....|....+|+.+ +.+=|.. .++.+++|..|+..++.+.... ++.++
T Consensus 59 R~~nPT~~~lE~~~----a~LEg~~-----------~~~afsSGmaAI~~~~l~ll~~-----------------GD~vl 106 (396)
T COG0626 59 RTGNPTRDALEEAL----AELEGGE-----------DAFAFSSGMAAISTALLALLKA-----------------GDHVL 106 (396)
T ss_pred cCCCccHHHHHHHH----HHhhCCC-----------cEEEecCcHHHHHHHHHHhcCC-----------------CCEEE
Confidence 34567778888866 5553443 5688888866665554432111 12344
Q ss_pred Eeccc----chHHHH-HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 201 ASPAC----TELEVV-MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 201 v~~s~----~s~~ka-a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+..+. +.+... ....|+++..++ ..|.+.+++++.+ .++.+|.....++.+--+.||++|+++|
T Consensus 107 ~~~~~YG~t~~~~~~~l~~~gi~~~~~d----~~~~~~~~~~~~~-------~~tk~v~lEtPsNP~l~v~DI~~i~~~A 175 (396)
T COG0626 107 LPDDLYGGTYRLFEKILQKFGVEVTFVD----PGDDEALEAAIKE-------PNTKLVFLETPSNPLLEVPDIPAIARLA 175 (396)
T ss_pred ecCCccchHHHHHHHHHHhcCeEEEEEC----CCChHHHHHHhcc-------cCceEEEEeCCCCcccccccHHHHHHHH
Confidence 33332 333333 345788888887 4455566666652 1578999999999999999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCcc-ccceeeecCCcccccccc--ceeEEecChhhHHHhh-ccCCCccccCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVE-LADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAF-NVDPLYLKHDQ 351 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~-~~~~~yl~~~~ 351 (561)
+++|+.+.||.+|+...+.-| ++ .||.+.-++.|.+++-.. .|++..++.. +...+ .....++
T Consensus 176 ~~~g~~vvVDNTfatP~~q~P--------L~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~-~~~~~~~~~~~~~---- 242 (396)
T COG0626 176 KAYGALVVVDNTFATPVLQRP--------LELGADIVVHSATKYLGGHSDVLGGVVLTPNEE-LYELLFFAQRANT---- 242 (396)
T ss_pred HhcCCEEEEECCcccccccCh--------hhcCCCEEEEeccccccCCcceeeeEEecChHH-HHHHHHHHHHhhc----
Confidence 999999999999997554333 22 269999999999997643 4544444433 32221 1100110
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
|.. ....-.|+.++ |.+.+.-+++++.++|..+++.|++.|.++-+
T Consensus 243 -G~~-------------l~p~dA~l~lR--GlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V 288 (396)
T COG0626 243 -GAV-------------LSPFDAWLLLR--GLRTLALRMERHNENALKIAEFLADHPKVKKV 288 (396)
T ss_pred -CCC-------------CCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 111 22334566655 45557778999999999999999999988744
No 280
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.25 E-value=1.1e-08 Score=108.98 Aligned_cols=308 Identities=11% Similarity=-0.005 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.+.++.+.|.++++-+.. ....|++|||+||..|+..||..-. .++++.+...
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~--------~~v~f~~SGsEA~e~AlklAr~~tg---------------r~~Ii~~~~~yH 152 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGFE--------KKVFFTNSGTESNEAAIKIARYHTG---------------RKYIIAFLGAFH 152 (441)
T ss_pred CHHHHHHHHHHHHhCCCCCC--------CEEEECCchHHHHHHHHHHHHHHhC---------------CCeEEEECCCcC
Confidence 34566677788887642110 1468999999999999999996521 1234443332
Q ss_pred -chHHHHHHhcc-------------CCeEEeeC-CCCc-----cC--------hhhHHHHHhhhchhhcCCceEEEEEec
Q psy9807 206 -TELEVVMLDWL-------------GKMLDLPK-EFLA-----CS--------GGKGGGVIQRKSDREMCSDLLQVVATL 257 (561)
Q Consensus 206 -~s~~kaa~~~g-------------~~v~~v~~-~~g~-----~d--------~~~Le~~i~~~~~~~~g~~p~~vv~t~ 257 (561)
.+.. +..+.+ ..+..+|. ...+ -| ++.+++.+.+ ....+..+.+|++.-
T Consensus 153 G~t~~-~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~--~~~~~~~iaavi~Ep 229 (441)
T PRK05769 153 GRTYG-SLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFK--KLVPPEEVAAIIVEP 229 (441)
T ss_pred CccHH-HHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHh--hccCCCceEEEEECc
Confidence 2211 111111 12334443 1111 11 2335543322 111223577888887
Q ss_pred CCCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecCh
Q psy9807 258 GTTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDP 333 (561)
Q Consensus 258 gtt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~ 333 (561)
...+.|.+-| +++|.++|++||+.+++|.++.|......-+.....++ ..|.+++ .|.++.-+..|+++.++.
T Consensus 230 v~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~--~K~l~~G~p~gav~~~~~ 306 (441)
T PRK05769 230 IQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITL--AKAIAGGLPLGAVIGRAE 306 (441)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEE--cccccCCcccEEEEEehh
Confidence 7788899888 99999999999999999999886433221111111133 3588775 588876566777777543
Q ss_pred hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEE
Q psy9807 334 SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEV 412 (561)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l 412 (561)
- . ..+. .. . + .+. ....+...+++..+..-.- +..++..++.++|++.|+++. .+.+
T Consensus 307 i-~-~~~~---~~--~---~-------~T~----~g~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~ 364 (441)
T PRK05769 307 L-M-FLPP---GS--H---A-------NTF----GGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEF 364 (441)
T ss_pred h-h-hcCC---CC--C---C-------CCC----CcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 1 1111 00 0 0 011 1123333333333322111 567778888888888887641 1222
Q ss_pred eccc-ccc-ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 413 IYEV-LMG-LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 413 ~~~~-~~~-~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
+... ..+ ++.+.+.+. +
T Consensus 365 ~~~vrg~G~~~~i~~~~~------------------------------------------------------~------- 383 (441)
T PRK05769 365 IGDVRGLGLMIGVELVKD------------------------------------------------------R------- 383 (441)
T ss_pred eeeeecceEEEEEEeccC------------------------------------------------------C-------
Confidence 2111 111 111111000 0
Q ss_pred ecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
-.+..+....+.+.+.+.|.+. .+ .+...+|++.. ...+++||++++++++++..++
T Consensus 384 -~~~~~~~~~~~~~~~~~~Gil~-~~---~~~~~lr~~p~-l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 384 -KEPDPKLRDKVLYEAFKRGLLL-LG---AGKSAIRIIPP-LIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred -ccccHHHHHHHHHHHHhCCcEE-ec---CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 0011234556788888888554 32 24468999855 4568889999999999887654
No 281
>PRK06855 aminotransferase; Validated
Probab=99.25 E-value=5.7e-09 Score=111.38 Aligned_cols=253 Identities=9% Similarity=-0.035 Sum_probs=141.3
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++-+.+.+|+.+..|++-+ ....++|+|++++...++. . +. + ++.+
T Consensus 68 ~Y~~~~G~~~LReaia~~~~~~~g~~~~-------~~~I~it~G~~~al~~~~~-l----~~------~-------Gd~V 122 (433)
T PRK06855 68 GYCPTKGVLETREFLAELNNKRGGAQIT-------PDDIIFFNGLGDAIAKIYG-L----LR------R-------EARV 122 (433)
T ss_pred CCCCCCCCHHHHHHHHHHHHhccCCCCC-------HhHEEEcCcHHHHHHHHHH-h----cC------C-------CCeE
Confidence 4444445567888889999887776422 1257889998888655432 1 10 0 2244
Q ss_pred EEecccchHHHHH--HhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHH
Q psy9807 200 IASPACTELEVVM--LDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEI 271 (561)
Q Consensus 200 vv~~s~~s~~kaa--~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI 271 (561)
++....|.....+ ...|.+++.+|. . ++.+|+++|++++.. . ..+.+++.+.-.+.||.+-+ +++|
T Consensus 123 lv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~--~----~~~~~i~l~~P~NPTG~~~s~~~~~~l 196 (433)
T PRK06855 123 IGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKY--N----PSIAGILLINPDNPTGAVYPKEILREI 196 (433)
T ss_pred EEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhc--C----CCceEEEEECCCCCCCcCCCHHHHHHH
Confidence 4444444433332 234777888887 2 357899999999864 1 13455666667888998865 5667
Q ss_pred HHHHhhcCceEEechhcccccccCccccccccCccc-cceeeecCCccccccc-cceeEEecC---hhhHHHhhccCCCc
Q psy9807 272 GQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVEL-ADSFNFNPHKWMLVTF-DCSAMWLKD---PSWVVNAFNVDPLY 346 (561)
Q Consensus 272 ~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~-aDsi~~~~HK~l~~P~-g~g~l~~r~---~~~l~~~~~~~~~y 346 (561)
+++|++||+|++.|.+|+....-......+..-... --.+..++.|.++.|. =+|.+...+ ...+...+.....+
T Consensus 197 ~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~ 276 (433)
T PRK06855 197 VDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNA 276 (433)
T ss_pred HHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHh
Confidence 778999999999999998543211111111110111 1256789999997664 377777622 11111111100000
Q ss_pred cccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Q psy9807 347 LKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG----VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 420 (561)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g----~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~ 420 (561)
.... . + ...+...++.+.+. ...+++..+...+..+.+.+.|++.+++.+. +++.+.
T Consensus 277 ~~~~-------~------~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~-~p~gg~ 337 (433)
T PRK06855 277 KMIE-------V------C---STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVN-RTNGAF 337 (433)
T ss_pred hccc-------c------C---CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecc-CCCeeE
Confidence 0000 0 0 01122223333332 2345566666677778888888887776643 444444
No 282
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.25 E-value=1.2e-08 Score=108.23 Aligned_cols=173 Identities=13% Similarity=0.023 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.|++++.-+. ...+|++|||+||-.|+..||...... + ..+++.....
T Consensus 117 ~~~~~lAe~L~~~~p~~~---------~~v~f~~SGsEA~e~AlklAr~~t~~~----g--------r~~ii~~~~~yHG 175 (442)
T TIGR03372 117 PLRALLAKTLAALTPGKL---------KYSFFCNSGTESVEAALKLAKAYQSPR----G--------KFTFIAASGAFHG 175 (442)
T ss_pred HHHHHHHHHHHHhCCCCc---------CEEEEeCCchHHHHHHHHHHHHHHhhc----C--------CcEEEEECCCccC
Confidence 345556777777653221 135899999999999999998763210 0 1234444333
Q ss_pred chHHHHHHhcc------------CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HH
Q psy9807 206 TELEVVMLDWL------------GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LE 269 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~ 269 (561)
.+.. +..+.+ ..+..+| ..|.+.+++.+++ ....+..+.+|++.-...+.|.+-| ++
T Consensus 176 ~t~~-~ls~t~~~~~~~~~~p~~~~~~~~p----~~d~~~~~~~l~~--~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~ 248 (442)
T TIGR03372 176 KSLG-ALSATAKPAFRKPFMPLLPGFHHVA----FGDIEAMLKALNE--CKKTGDDVAAIILEPIQGEGGVILPPEGYLP 248 (442)
T ss_pred CCHH-HhhccCCcccCCCCCCCCCCCEEeC----CCCHHHHHHHHHH--HhcCCCcEEEEEEeCccCCCCcccCCHHHHH
Confidence 2211 111111 1234444 2367788888865 3333456778888888888899888 99
Q ss_pred HHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecC
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKD 332 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~ 332 (561)
++.++|++||+.+++|..+.|......-+..-..++ ..|.++ ..|.++.= +++|++..++
T Consensus 249 ~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt--~gK~lg~G~~Pigavv~~~ 309 (442)
T TIGR03372 249 AVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGV-QPDILC--LAKALGGGVMPIGATIATE 309 (442)
T ss_pred HHHHHHHHcCCEEEEeecccCCCccccchhhhhcCC-CCCeee--ehhhhcCCcccceEEEecH
Confidence 999999999999999999876433222111111244 468776 58998854 3467777754
No 283
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.24 E-value=1.3e-08 Score=105.10 Aligned_cols=161 Identities=12% Similarity=-0.021 Sum_probs=104.6
Q ss_pred HHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccch-HHHHH
Q psy9807 134 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACTE-LEVVM 212 (561)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~s-~~kaa 212 (561)
+++++++.+|.+++ ..++|+|++++....+.+ + + ++.+++....|. +..++
T Consensus 60 lr~~ia~~~~~~~~---------~I~~t~G~~~~l~~~~~~----~-~--------------gd~V~v~~P~y~~~~~~~ 111 (337)
T PRK03967 60 LREAIAEFYGLDAE---------NIAVGNGSDELISYLVKL----F-E--------------GKHIVITPPTFGMYSFYA 111 (337)
T ss_pred HHHHHHHHhCcCcc---------eEEEcCCHHHHHHHHHHH----h-C--------------CCeEEEeCCChHHHHHHH
Confidence 44455666676654 678899988876433221 1 0 124555544444 44456
Q ss_pred HhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 213 LDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 213 ~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
...|.+++.++. +++.+|++.|++.+.+ +.+++.+...+.||.+-+.++|.++++ +++++++|.+|+..
T Consensus 112 ~~~g~~~~~v~~~~~~~~d~~~l~~~~~~---------~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~ 181 (337)
T PRK03967 112 KLNGIPVIDVPLKEDFTIDGERIAEKAKN---------ASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEF 181 (337)
T ss_pred HHcCCeEEEeecCCCCCcCHHHHHHhccC---------CCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhh
Confidence 778999999998 6678999999876533 335666788999999999999999995 79999999999753
Q ss_pred cccCccccccccCccccceeeecCCccccccc-cceeEEecChhhH
Q psy9807 292 AFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWV 336 (561)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l 336 (561)
. ...........+. -.+..++.|.++.|. =+|.++. ++..+
T Consensus 182 ~--~~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~-~~~~i 223 (337)
T PRK03967 182 S--GKSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIA-NEEII 223 (337)
T ss_pred c--ccchHHHHhhCCC-EEEEecchHhhcchhhhheeeec-CHHHH
Confidence 2 1111111111111 256689999998663 4666665 44433
No 284
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.24 E-value=3.8e-09 Score=109.93 Aligned_cols=239 Identities=12% Similarity=0.008 Sum_probs=129.3
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCC-ccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLP-KEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
|.......++.+++.+|+.+..|.+ -. ....++|+|++++...++.+.. .. + ++.+
T Consensus 52 Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-------~~~I~it~G~~~~i~~~~~~l~---~~------~-------gd~V 108 (357)
T TIGR03539 52 YPQTWGTPELREAIVDWLERRRGVPGLD-------PTAVLPVIGTKELVAWLPTLLG---LG------P-------GDTV 108 (357)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCCCC-------cCeEEEccChHHHHHHHHHHHc---CC------C-------CCEE
Confidence 4434445688899999999887754 21 1257788888887654433210 00 0 2234
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVC 275 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia 275 (561)
++.... .....++...|.+++.++ |++. +.. . .+.+|+.+..++.||.+-+ +++|+++|
T Consensus 109 l~~~p~y~~~~~~~~~~g~~~~~v~------~~~~----l~~--~-----~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a 171 (357)
T TIGR03539 109 VIPELAYPTYEVGALLAGATPVAAD------DPTE----LDP--V-----GPDLIWLNSPGNPTGRVLSVDELRAIVAWA 171 (357)
T ss_pred EECCCCcHHHHHHHHhcCCEEeccC------Chhh----cCc--c-----CccEEEEeCCCCCcCccCCHHHHHHHHHHH
Confidence 443333 445555667777776664 2222 222 1 4567777788889998765 67799999
Q ss_pred hhcCceEEechhcccccccCcccccccc----Cc-cccceeeecCCcccccccc-ceeEEecChhhHHHhhccCCCcccc
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMK----GV-ELADSFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~----gi-~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
++||+++++|.+|+... +.+.....+. +. ..-..+..+++|.++.|.- +|.++ .++..+.........+.
T Consensus 172 ~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i-~~~~~~~~~~~~~~~~~-- 247 (357)
T TIGR03539 172 RERGAVVASDECYLELG-WEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVA-GDPALVAELLTVRKHAG-- 247 (357)
T ss_pred HHcCeEEEEecchhhhc-cCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEe-cCHHHHHHHHHHHhhcc--
Confidence 99999999999987422 1111111111 00 0113677799999876644 45554 45444332211110000
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccccccee
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 422 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~ 422 (561)
.....+...++...+. ...+++..++..+..+++.+.|++. |+++. ++..+.+.
T Consensus 248 -----------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~-~p~~~~~~ 302 (357)
T TIGR03539 248 -----------------LMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRID-HSEAGLYL 302 (357)
T ss_pred -----------------cCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCc-CCCccEEE
Confidence 0011112222222231 2334555566667777888888875 66544 33445433
No 285
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.24 E-value=3.7e-09 Score=107.10 Aligned_cols=296 Identities=16% Similarity=0.142 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---c
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---T 206 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~ 206 (561)
.-.++.++|+++.+ .. .-.+|++||||||-.|+..||.+.. ++ -..+++.+... -
T Consensus 85 ~~~~la~~L~~~s~-~~---------d~vff~NSGaEA~EaAiKlARk~~~------~~------~k~~Iia~~nsFHGR 142 (404)
T COG4992 85 PQAELAEKLVELSP-FA---------DRVFFCNSGAEANEAALKLARKYTG------DP------EKSKIIAFENSFHGR 142 (404)
T ss_pred HHHHHHHHHHhhCc-cc---------cEEEEcCCcHHHHHHHHHHHHHHcC------CC------CCcEEEEEcCCcCCc
Confidence 33455667777765 11 1468999999999999999998753 01 01234433332 1
Q ss_pred hHHHHHHhcc------------CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc----CHHH
Q psy9807 207 ELEVVMLDWL------------GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD----CLEE 270 (561)
Q Consensus 207 s~~kaa~~~g------------~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id----pl~e 270 (561)
++.. ....+ ..++.+| -.|+++|+++|.+ .+.+|++.-..-..|.+- =|++
T Consensus 143 T~ga-lS~t~~~ky~~~F~Pl~~g~~~vp----fnDi~al~~ai~~--------~taAvivEPIQGEgGV~~~~~~fl~~ 209 (404)
T COG4992 143 TLGA-LSATGQPKYRKGFGPLLPGFRHVP----FNDIEALEAAIDE--------DTAAVIVEPIQGEGGVIPAPPEFLKA 209 (404)
T ss_pred ccee-eeccCChhhccCCCCCCCCceecC----CCCHHHHHHHhcc--------CeEEEEEecccCCCCCCCCCHHHHHH
Confidence 1100 00111 1345555 5689999999988 577888876666667664 4888
Q ss_pred HHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccC
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHD 350 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~ 350 (561)
+.++|++||+.+++|..+.|......-+..-..++ ..|.++. -|.|+.-++.|+++.++ . ....+. +. .
T Consensus 210 lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV-~PDI~tl--aK~LgGG~PigA~la~~-~-~~~~~~--~G----~ 278 (404)
T COG4992 210 LRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGV-EPDILTL--AKALGGGFPIGAMLATE-E-IASAFT--PG----D 278 (404)
T ss_pred HHHHHHHhCeEEEEeccccCCCccchHHHHHHhCC-CCCEEEe--eccccCCccceeeEEch-h-hhhcCC--CC----c
Confidence 99999999999999999887544332222211233 4587776 68888778889998873 2 111111 00 0
Q ss_pred CCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeccccccceeeecccCc
Q psy9807 351 QQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVIYEVLMGLVCFRLKHWQ 429 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~~~~~~~v~f~~~~~~ 429 (561)
. ++ +-....++...+...+....-++.+++..+...+|.+.|+++. .+.++.+ +++..
T Consensus 279 H-gS-----------TfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~---------vRG~G 337 (404)
T COG4992 279 H-GS-----------TFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKE---------VRGRG 337 (404)
T ss_pred c-cC-----------CCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceee---------eecce
Confidence 0 10 1112344444444444433344566777778888998888751 2222221 22222
Q ss_pred cccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC
Q psy9807 430 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN 509 (561)
Q Consensus 430 ~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~ 509 (561)
+-.+ +-|. . +.....+.+.+.++
T Consensus 338 LmiG------------------------------------------------------iel~--~-~~~a~~~~~~~~~~ 360 (404)
T COG4992 338 LMIG------------------------------------------------------IELK--E-PYRARDIVRALREE 360 (404)
T ss_pred eEEE------------------------------------------------------EEec--C-cccHHHHHHHHHHC
Confidence 1111 1111 1 11245788999999
Q ss_pred CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 510 GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 510 g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
|.... .+ +..++|+. .....+++||++.++.++++...+.
T Consensus 361 gvL~~-~a---~~~ViR~~-PpL~i~~eei~~~~~~l~~~l~~~~ 400 (404)
T COG4992 361 GVLVL-PA---GPNVIRFL-PPLVITEEEIDEALDALERALAAAS 400 (404)
T ss_pred CeEEe-cC---CCCeEEec-CCccCCHHHHHHHHHHHHHHHHHhh
Confidence 85443 32 33499997 4467899999999999999877654
No 286
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.23 E-value=1.7e-08 Score=107.51 Aligned_cols=312 Identities=13% Similarity=0.086 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+.+.++.+.+++++.-.- ....|++|||+||-.|+..||.....+ +. +...+++.....
T Consensus 89 ~~~~~la~~l~~~~p~~~---------~~v~f~~sGseA~e~AlklAr~~~~~~----g~-----~~r~~ii~~~~~yHG 150 (442)
T PRK13360 89 PKAFELANRIAEIAPGGL---------NHVFFTNSGSESVDTALKIALAYHRAR----GE-----GSRTRLIGRERGYHG 150 (442)
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEeCCcHHHHHHHHHHHHHHHHhc----CC-----CCCcEEEEEcCCcCC
Confidence 344566777777752110 146899999999999999999763211 00 001244444433
Q ss_pred chHHHHHHhcc------------CCeEEeeC-CC-Cc--c----------ChhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 206 TELEVVMLDWL------------GKMLDLPK-EF-LA--C----------SGGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~-~~-g~--~----------d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
.++. +..+.+ ..+..+|. .+ .+ . ..++|++.++. . .+..+.+|++.-..
T Consensus 151 ~t~g-als~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~--~--~~~~~aavivEpi~ 225 (442)
T PRK13360 151 VGFG-GISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTL--H--DASTIAAVIVEPVA 225 (442)
T ss_pred ccHh-hhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHh--c--CCCcEEEEEEcccc
Confidence 2211 111111 12333443 11 11 1 24577777754 1 12357788888888
Q ss_pred CCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChh
Q psy9807 260 TNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPS 334 (561)
Q Consensus 260 t~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~ 334 (561)
.+.|.+-| +++|.++|++||+++++|.++.|......-+..-..++ ..|.++ ..|.++.- +.+|.+..++.
T Consensus 226 g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDivt--~gK~l~gG~~P~gav~~~~~- 301 (442)
T PRK13360 226 GSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLLT--CAKGLTNGAIPMGAVFVSSE- 301 (442)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCceee--eeeccccCccceEEEEEcHH-
Confidence 88899989 99999999999999999999965433322211111244 368764 48988642 23566666543
Q ss_pred hHHHhhccCCC----ccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 335 WVVNAFNVDPL----YLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 335 ~l~~~~~~~~~----yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
.. ..+...+. ++. ..+.. +.+......-++++.+..+ .+.++..++.+++.+.|+++..+
T Consensus 302 i~-~~~~~~~~~~~~~~~-----------~~T~~-g~pl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~ 365 (442)
T PRK13360 302 IH-DAFMQGPEAGIEFFH-----------GYTYS-GHPLACAAALATLDLYERE---GLLTRAARLAPYWEDALHSLRDA 365 (442)
T ss_pred HH-HHhhcCCcccccccc-----------CCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcC
Confidence 22 22321110 110 00111 1111222233444544443 35677788888898888865322
Q ss_pred EEeccc-cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhccee
Q psy9807 411 EVIYEV-LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 489 (561)
Q Consensus 411 ~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~ 489 (561)
..+.+. ..+++. + +-
T Consensus 366 ~~v~~vrG~Gl~~----------~------------------------------------------------------~~ 381 (442)
T PRK13360 366 PHVIDIRNLGLVG----------A------------------------------------------------------VE 381 (442)
T ss_pred CCeeeeeccceEE----------E------------------------------------------------------EE
Confidence 211111 011100 0 11
Q ss_pred eec--CCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 490 FRL--KGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 490 f~~--~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
|.. .........+..++.+.|.+. .. .+ ..+|++.. ...|++|||++++++.++.+++
T Consensus 382 l~~~~~~~~~~~~~~~~~l~~~Gvl~-~~---~~-~~lr~~Pp-l~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 382 LAPRDGKPGKRAYEVFLKCFEKGLMI-RY---TG-DILALSPP-LIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EecCCCCcchhHHHHHHHHHHCCcEE-Ee---cC-CEEEEeCC-CccCHHHHHHHHHHHHHHHHHh
Confidence 110 011223456777888888544 22 12 47999854 4668899999999999887654
No 287
>PRK12403 putative aminotransferase; Provisional
Probab=99.22 E-value=3.5e-08 Score=105.76 Aligned_cols=178 Identities=14% Similarity=0.012 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc-eEEecc--c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN-LIASPA--C 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~-~vv~~s--~ 205 (561)
+...++.+.|+++++-.. ...+|++|||+||..|+..||...... +.+ .+. ++...+ +
T Consensus 98 ~~~~~lae~L~~~~p~~~---------~~v~f~~SGseA~e~AiklAr~~~~~~---g~~-------~r~~ii~~~~~yH 158 (460)
T PRK12403 98 PAVIELSELLFSLLPGHY---------SHAIYTNSGSEANEVLIRTVRRYWQVL---GKP-------QKKIMIGRWNGYH 158 (460)
T ss_pred HHHHHHHHHHHHhCCCCc---------CEEEEeCCcHHHHHHHHHHHHHHHHhh---CCC-------CCcEEEEECCCcC
Confidence 345555666677765221 146899999999999999998753211 000 012 222223 2
Q ss_pred chHHHHHHhccC-----------CeEEeeC-CCC----cc--------ChhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 206 TELEVVMLDWLG-----------KMLDLPK-EFL----AC--------SGGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 206 ~s~~kaa~~~g~-----------~v~~v~~-~~g----~~--------d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
-+..-+..+.+. .+..+|. ... .+ +.+.|++.+.+ . ....+.+|++.-....
T Consensus 159 G~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~--~--~~~~iaavI~Epv~g~ 234 (460)
T PRK12403 159 GSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILE--L--GAENVAGFVAEPFQGA 234 (460)
T ss_pred cccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHH--h--CCCceEEEEEccccCC
Confidence 222223333221 1333442 100 11 13456665533 1 1125667888777778
Q ss_pred CccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecC
Q psy9807 262 CCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKD 332 (561)
Q Consensus 262 tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~ 332 (561)
.|.+-| +++|.++|++||+.+++|.+++|......-+..-..|+ ..|.++ ..|.|+.-+ ..|+++.++
T Consensus 235 gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~--~gK~lggG~~Piga~v~~~ 307 (460)
T PRK12403 235 GGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDTLS--IAKGLTSGYVPMGGLVLSK 307 (460)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCeEE--EcccccccccceEEEEECH
Confidence 888888 99999999999999999999977544332221111244 368886 589888553 567777754
No 288
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.22 E-value=2e-08 Score=107.28 Aligned_cols=312 Identities=12% Similarity=0.035 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+.+.++.+.|++++.-... ....|++|||+||..|+..||.... ..+++.+...
T Consensus 85 ~~~~~lae~L~~~~p~~~~--------~~v~f~~SGseA~e~AiklAr~~tg---------------r~~ii~~~~~YHG 141 (445)
T PRK08593 85 EPLVRLAKKLCELAPGDFE--------KRVTFGLSGSDANDGIIKFARAYTG---------------RPYIISFTNAYHG 141 (445)
T ss_pred HHHHHHHHHHHHhCCCCCC--------CEEEECCchHHHHHHHHHHHHHhhC---------------CCeEEEECCCcCC
Confidence 4455566667777532110 1468999999999999999986521 1244444433
Q ss_pred chHHHHHHhcc-------------CCeEEeeC-CCC-----ccCh-------hhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 206 TELEVVMLDWL-------------GKMLDLPK-EFL-----ACSG-------GKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 206 ~s~~kaa~~~g-------------~~v~~v~~-~~g-----~~d~-------~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
.+.. +..+.+ ..+..+|. +.. ..+. +.+++.+++ .. ....+.+|++.-..
T Consensus 142 ~t~~-als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~iAavI~EPv~ 217 (445)
T PRK08593 142 STYG-SLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEK--YL-PADEVACIVIETIQ 217 (445)
T ss_pred CcHH-HHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHh--hc-CCCceEEEEEcccc
Confidence 2111 111111 12344553 211 1122 233333322 10 12356778887777
Q ss_pred CCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhh
Q psy9807 260 TNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSW 335 (561)
Q Consensus 260 t~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~ 335 (561)
...|.+-| +++|.++|++||+++++|.++.|.......+.....++ ..|.++ ..|.++.-+..|+++.++. .
T Consensus 218 g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t--~gK~l~~G~p~gav~~~~~-i 293 (445)
T PRK08593 218 GDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMS--FGKSLAGGMPMSAIVGRKE-I 293 (445)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEee--ecccccCCcccEEEEEcHH-H
Confidence 77788877 99999999999999999999865432221110011133 357665 4788875455677777542 2
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVIY 414 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~ 414 (561)
. ..+.. ..+.. +.. ..+.......++++.+-.+ +++++..++.++|.+.|+++. ...++.
T Consensus 294 ~-~~~~~-~~~~~-------------T~~-~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~ 354 (445)
T PRK08593 294 M-ESLEA-PAHLF-------------TTG-ANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVG 354 (445)
T ss_pred H-hhhcc-CCCCC-------------CCC-CCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 2 22221 11100 000 1111222233444444333 456777778888888887531 111211
Q ss_pred cc-cccce-eeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeec
Q psy9807 415 EV-LMGLV-CFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL 492 (561)
Q Consensus 415 ~~-~~~~v-~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~ 492 (561)
.. ..+.. .+.+. ..+. . .
T Consensus 355 ~vrG~Gl~~gi~l~------------------------------------------------------~~~~---~--~- 374 (445)
T PRK08593 355 DVRGYGLSIGIDIV------------------------------------------------------SDKK---L--K- 374 (445)
T ss_pred EEeccceEEEEEEe------------------------------------------------------cCCC---c--C-
Confidence 11 11110 01000 0000 0 0
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 493 KGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 493 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
.+.......+...+.+.|.+. .+. +..++|++.. ...|++||+++++++.++.+++.+
T Consensus 375 ~~~~~~~~~~~~~~~~~Gv~~-~~~---~~~~lr~~p~-l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 375 TRDNEAALKICNYCFEHGVVI-IAV---AGNVLRFQPP-LVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred CCcHHHHHHHHHHHHHCCeEE-ecc---CCCEEEEECC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence 012234567888888888554 322 2348999866 566888999999999998887654
No 289
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.22 E-value=5.5e-08 Score=103.80 Aligned_cols=313 Identities=14% Similarity=0.095 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.|++++.-+- ....|++|||+||-.|+..||.....+ +. +...+++.+...
T Consensus 92 ~~~~~la~~L~~~~p~~~---------~~v~f~~sGseAve~AlklAr~~~~~~----g~-----~~r~~ii~~~~~yHG 153 (445)
T PRK09221 92 PLAFELAERLAELAPGGL---------DHVFFTNSGSESVDTALKIALAYHRAR----GQ-----GTRTRLIGRERGYHG 153 (445)
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEeCCcHHHHHHHHHHHHHHHHhc----CC-----CCCcEEEEECCCcCc
Confidence 344456677777763211 146899999999999999998763211 00 001234443332
Q ss_pred chHHHHHHhcc------------CCeEEeeC-C-CCc------------cChhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 206 TELEVVMLDWL------------GKMLDLPK-E-FLA------------CSGGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~-~-~g~------------~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
.+.. +..+.+ ..+..+|. . ..+ -..++|++.++. . ....+.+|++.-..
T Consensus 154 ~t~g-als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~--~~~~iAavi~Epv~ 228 (445)
T PRK09221 154 VGFG-GISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVAL--H--DASTIAAVIVEPMA 228 (445)
T ss_pred cchh-hhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHh--c--CCCcEEEEEEeccc
Confidence 1111 111111 12333332 1 000 013567776654 1 11357788888888
Q ss_pred CCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChh
Q psy9807 260 TNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPS 334 (561)
Q Consensus 260 t~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~ 334 (561)
...|.+-| +++|.++|++||+.+++|.++.|......-+.....++ ..|.+++ .|.++.- +..|+++.++.
T Consensus 229 g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~PDi~~~--gK~l~gG~~Pi~av~~~~~- 304 (445)
T PRK09221 229 GSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TPDIITF--AKGLTNGAIPMGAVIASDE- 304 (445)
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CCCEEEe--ccccccCcccceeeEEcHH-
Confidence 88899988 99999999999999999999876433222111111233 3586654 6777532 22455665432
Q ss_pred hHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 335 WVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
.. ..+...+.+.. .+. ...+-....+.+. .+++.+..+ .++++..++.++|++.|+++.++.
T Consensus 305 i~-~~~~~~~~~~~--------~~~---~~~T~~~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~ 369 (445)
T PRK09221 305 IY-DAFMQGPEYAI--------EFF---HGYTYSAHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLP 369 (445)
T ss_pred HH-HhhccCccccc--------ccc---cccCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCC
Confidence 22 22322111100 000 0001112333333 344444333 457788889999999998763322
Q ss_pred Eeccc-cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 412 VIYEV-LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 412 l~~~~-~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
.+.+. ..+++. + +.|
T Consensus 370 ~v~~vrg~Gl~~----------~------------------------------------------------------v~~ 385 (445)
T PRK09221 370 HVIDIRNIGLVA----------G------------------------------------------------------IEL 385 (445)
T ss_pred CEEEEecCceEE----------E------------------------------------------------------EEE
Confidence 22111 111100 0 111
Q ss_pred ec--CCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 491 RL--KGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 491 ~~--~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.. .........+.+.+.+.|.+. .. .+ ..+|++.. ...+++||++++++++++..++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~Gv~~-~~---~~-~~lr~~Pp-l~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 386 APRPGAPGARGYEAFMKCFEKGLLV-RY---TG-DTIALSPP-LIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ecccccccchHHHHHHHHHHCCeEE-ee---cC-CEEEEECC-ccCCHHHHHHHHHHHHHHHHhh
Confidence 10 011122346778888888544 32 22 47999844 5668899999999999887653
No 290
>KOG2040|consensus
Probab=99.21 E-value=1.9e-09 Score=112.44 Aligned_cols=254 Identities=11% Similarity=0.089 Sum_probs=165.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
.+....++..++..||+++-|++.- .+-..+|..+-..+|.+-|.....+ +. +...-.+|.
T Consensus 576 QaqGY~~lf~~Le~~Lc~iTG~D~~----------s~QPNsGA~GEYaGL~~IRaY~~~k----ge-----~hRnvClIP 636 (1001)
T KOG2040|consen 576 QAQGYQQLFTELEKDLCEITGFDSF----------SLQPNSGAQGEYAGLRVIRAYLESK----GE-----GHRNVCLIP 636 (1001)
T ss_pred HHhhHHHHHHHHHHHhheeecccce----------eecCCCCcccchhhHHHHHHHHHhc----cC-----CcceeEEEe
Confidence 3445678888899999999999742 2334556666777777777654322 11 111223455
Q ss_pred ccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc-CHHHHHHHHhhcC
Q psy9807 203 PAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD-CLEEIGQVCRQKD 279 (561)
Q Consensus 203 ~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id-pl~eI~~ia~~~~ 279 (561)
.|. -.--..+.+.|.+|+.|.+ .+|.+|+.+|+..-+++ .. .-.++.+|..+|. |.+. .+++++++.|+||
T Consensus 637 vSAHGTNPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh--~~---~Laa~MvTYPST~-GvfE~~i~d~cd~iHehG 710 (1001)
T KOG2040|consen 637 VSAHGTNPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKH--KD---NLAALMVTYPSTH-GVFEEGIDDICDIIHEHG 710 (1001)
T ss_pred ecccCCChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHh--hh---hhheeEEeccccc-ccccccHHHHHHHHHhcC
Confidence 555 3444456788999999999 99999999999988773 21 3335555655544 6664 7999999999999
Q ss_pred ceEEechhcccc--cccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCC---CC
Q psy9807 280 VWLHVDAAYAGS--AFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQ---GS 354 (561)
Q Consensus 280 ~~lhVDaA~gg~--~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~---~~ 354 (561)
--+.+|||---. .+..| |--.+|.--.+.||.|+.|.|-|.=.+.....- ..-++||....- ..
T Consensus 711 GQVYlDGANMNAqVGlc~p-------Gd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK----~HLapfLP~HpVvs~~~ 779 (1001)
T KOG2040|consen 711 GQVYLDGANMNAQVGLCRP-------GDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK----KHLAPFLPSHPVVSPGR 779 (1001)
T ss_pred CEEEecCCCccceecccCC-------ccccccceeecccceeeecCCCCCCCCCccchh----hhccccCCCCCccCCCC
Confidence 999999983211 12222 233569999999999999988776555443221 122345543220 00
Q ss_pred CCCCCcccccCcCCc---chHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 355 APDYRHWQIPLGRRF---RSLKL-WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~---~al~l-w~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
..+-...+.-.+.++ ..+++ |+-++.+|..|+.+.-+-.+-+|.|+.++|+.+ .+++-
T Consensus 780 ~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~ 841 (1001)
T KOG2040|consen 780 PEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILF 841 (1001)
T ss_pred CCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeE
Confidence 111111111112222 23444 999999999999999999999999999999975 55543
No 291
>PRK06541 hypothetical protein; Provisional
Probab=99.21 E-value=3.2e-08 Score=106.02 Aligned_cols=325 Identities=13% Similarity=0.022 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.+.+++.-+- ....|++|||+||-.|+..||...... +.+ ...+++.....
T Consensus 95 ~~~~~la~~l~~~~p~~~---------~~v~f~~sGseAve~AlklAr~~~~~~---g~~------~r~~ii~~~~~yHG 156 (460)
T PRK06541 95 PPAIELAERLAALAPGDL---------NRVFFTTGGSEAVESAWKLAKQYFKLT---GKP------GKHKVISRAIAYHG 156 (460)
T ss_pred HHHHHHHHHHHHhCCCCc---------CEEEEcCCcHHHHHHHHHHHHHHHHhc---CCC------CccEEEEEcCcccC
Confidence 344455666677653211 246899999999999999998753110 000 01234443332
Q ss_pred chHHHHHHhcc------------CCeEEeeC-CCC-----ccC--------hhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 206 TELEVVMLDWL------------GKMLDLPK-EFL-----ACS--------GGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~-~~g-----~~d--------~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
.+.. +..+.+ ..+..+|. ... ..+ ++.|++.+++ . ....+.+|++.-..
T Consensus 157 ~t~~-a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~--~~~~~Aavi~EPv~ 231 (460)
T PRK06541 157 TTQG-ALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEF--E--GPDTVAAVFLEPVQ 231 (460)
T ss_pred cchh-hhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHh--c--CCCCEEEEEECCcc
Confidence 1111 111111 12344443 211 112 2566666643 1 12356777777777
Q ss_pred CCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChh
Q psy9807 260 TNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPS 334 (561)
Q Consensus 260 t~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~ 334 (561)
...|.+-| +++|.++|++||+.+++|.++.|......-+.....++ ..|.++ ..|.++.-+ ..|.++.++..
T Consensus 232 g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt--~gK~l~~G~~pigav~~~~~i 308 (460)
T PRK06541 232 NAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIIT--CAKGITSGYSPLGAMIASDRL 308 (460)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEE--ecccccCCccceeEEEEcHHH
Confidence 78899988 99999999999999999999855433322211111233 468775 689888533 46777775532
Q ss_pred hHHHhhccC-CCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 335 WVVNAFNVD-PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 335 ~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
. ..+... ..++.. .+-....+.+.+++..+..-.-+...++..++.++|.+.|+++....++
T Consensus 309 -~-~~~~~~~~~~~~~---------------~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v 371 (460)
T PRK06541 309 -F-EPFLDGPTMFLHG---------------YTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIV 371 (460)
T ss_pred -H-HHhhcCCCccccC---------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCe
Confidence 2 222211 111110 0111223333333333322112245677888889999998876322221
Q ss_pred ccc--cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeee
Q psy9807 414 YEV--LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 491 (561)
Q Consensus 414 ~~~--~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~ 491 (561)
... ...+..+.+.... ..+ -.|.
T Consensus 372 ~~vrg~Gl~~~ie~~~~~--~~~-----------------------------------------------------~~~~ 396 (460)
T PRK06541 372 GDVRGDGYFYGIELVKDK--ATK-----------------------------------------------------ETFT 396 (460)
T ss_pred EEEEecceEEEEEEecCc--ccc-----------------------------------------------------cCCc
Confidence 111 1111111111000 000 0000
Q ss_pred cCCCc-HHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 492 LKGPN-EINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 492 ~~~~~-~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
....+ .....+.+.+.+.|.+. .+. ..|..+||++.. ...+++||++++++++++.+++.
T Consensus 397 ~~~~~~~~~~~~~~~l~~~Gi~~-~~~-~~g~~~lrl~Pp-l~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 397 DDESERLLRGFLSPALFEAGLYC-RAD-DRGDPVVQLAPP-LISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred chhhhhhHHHHHHHHHHhCCeEE-Eec-CCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 00000 11235678888888554 332 234568999855 45688999999999999887654
No 292
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.20 E-value=1.6e-08 Score=106.97 Aligned_cols=179 Identities=15% Similarity=0.086 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEE-eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI-QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~-t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
++...++.+.|++++..|... .....| ++|||+||-.|+..||..- + .++++.+...
T Consensus 77 ~~~~~~lae~l~~~~~~~~~~------~~~~~f~~~sGseA~e~AlklAr~~t-------g--------r~~ii~~~~~y 135 (412)
T TIGR02407 77 TEAKREFLETFNEIILKPRGL------DYKVQFPGPTGTNAVESALKLARKVT-------G--------RSNVVSFTNAF 135 (412)
T ss_pred cHHHHHHHHHHHHhccCccCC------CceEEEeCCCchHHHHHHHHHHhhhc-------C--------CCeEEEECCCc
Confidence 455566677777765323210 012345 4899999999999998651 0 1234444333
Q ss_pred --chHHHHHHhcc------------CCeEEeeCCCC----ccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcc---
Q psy9807 206 --TELEVVMLDWL------------GKMLDLPKEFL----ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCA--- 264 (561)
Q Consensus 206 --~s~~kaa~~~g------------~~v~~v~~~~g----~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~--- 264 (561)
.+.. +..+.+ ..+..+|..+. .-+++.+++.+++ .......+.+|++.-.....|.
T Consensus 136 HG~t~~-als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~aavi~Epi~g~~G~~~~ 212 (412)
T TIGR02407 136 HGMTLG-SLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLED--SSSGVDLPAAVILETVQGEGGINVA 212 (412)
T ss_pred CCchHH-HHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHh--ccCCCCceEEEEeccccCCCCCccC
Confidence 2111 111111 12344443211 1346778888865 2111124566776655555565
Q ss_pred -ccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccc-cccceeEEecCh
Q psy9807 265 -FDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV-TFDCSAMWLKDP 333 (561)
Q Consensus 265 -idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~-P~g~g~l~~r~~ 333 (561)
-+-+++|.++|++||+++++|..+.|.......+.....++ ..|.+++ .|+++. -+..|++++++.
T Consensus 213 ~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~PDi~~~--~K~lg~~G~pigav~~~~~ 280 (412)
T TIGR02407 213 SDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGI-EPDIVCL--SKSISGYGLPLALTLIKPE 280 (412)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCC-CCCEEEe--chhccCCccceeEEEEchh
Confidence 35799999999999999999999886533222111111233 4687776 499875 566888888653
No 293
>PLN02672 methionine S-methyltransferase
Probab=99.20 E-value=9.3e-09 Score=117.65 Aligned_cols=314 Identities=11% Similarity=0.069 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE 207 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s 207 (561)
++-+.+.+|+++..|++.+. ....++++|++++...++.+..+ + ++.+++.... ..
T Consensus 734 dlr~aLa~~la~~~Gv~~d~------~e~IIvt~Gs~elL~lll~aLl~----------p-------GD~VLVp~PtY~~ 790 (1082)
T PLN02672 734 DPRPSILQFIKSNYGFPTDS------CTEFVYGDTSLALFNKLVLCCVQ----------E-------GGTLCFPAGSNGT 790 (1082)
T ss_pred HHHHHHHHHHHHHhCcCCCC------CCEEEEeCCHHHHHHHHHHHHcC----------C-------CCEEEEeCCChHH
Confidence 45688999999999987530 01345555544443333332111 0 2345555555 55
Q ss_pred HHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCC-CCCccc---cCHHHHHHHHhhcCc
Q psy9807 208 LEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGT-TNCCAF---DCLEEIGQVCRQKDV 280 (561)
Q Consensus 208 ~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt-t~tG~i---dpl~eI~~ia~~~~~ 280 (561)
...++...|.+++.+|+ . +..+|++.|++++.+ .. .+ +|+.+.-+ +.||.+ +.+++|+++|++||+
T Consensus 791 Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~--~~----~~-~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di 863 (1082)
T PLN02672 791 YVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLET--VK----KP-WVYISGPTINPTGLLYSNSEIEEILSVCAKYGA 863 (1082)
T ss_pred HHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc--CC----CC-EEEEECcCCCCcCccCCHHHHHHHHHHHHHcCC
Confidence 56667888999999998 3 568888999998854 11 22 34444444 888888 467778888999999
Q ss_pred eEEechhcccccccCcc-----ccccccCccc---c-c-eeeecCCccccccc-cceeEEecChhhHHHhhccCCCcccc
Q psy9807 281 WLHVDAAYAGSAFICPE-----NRYLMKGVEL---A-D-SFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~-----~~~~~~gi~~---a-D-si~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
++++|.+|+....-.+. .......... . . .+..++.|.++.|. -+|.++..+...+.. +.....+...
T Consensus 864 ~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~-l~~~~~~s~~ 942 (1082)
T PLN02672 864 RVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDA-FHSAPGLSRP 942 (1082)
T ss_pred EEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHH-HHHhhhhcCC
Confidence 99999999743331111 0111111100 0 1 34458887777664 477776655433322 2211111000
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceee
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG------VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 423 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g------~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f 423 (561)
-....+.+...+..+. ...+.+..+...+..+++.+.|++. ++++. +++.+.+.|
T Consensus 943 -----------------~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~-~PeGGFfLw 1003 (1082)
T PLN02672 943 -----------------HSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVL-EPQGGISMV 1003 (1082)
T ss_pred -----------------CcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEe-cCCcEEEEE
Confidence 0001112222222121 2345556666777888889999887 77755 445555444
Q ss_pred -ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC----CcHH
Q psy9807 424 -RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG----PNEI 498 (561)
Q Consensus 424 -~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~----~~~~ 498 (561)
+...+. ... +-+.... ....
T Consensus 1004 l~l~~~l-~~~------------------------------------------------------~~~~~~~~~~~~~ld 1028 (1082)
T PLN02672 1004 AKPSAYL-GKT------------------------------------------------------VKLKSIDGDTGIKLD 1028 (1082)
T ss_pred EEccccc-ccc------------------------------------------------------ccccccccccccCCC
Confidence 111100 000 0000000 0011
Q ss_pred HHHHHHHHHhCCcEEEEeeeE-CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 499 NEKLLKRINGNGKIHLVPSKI-RDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 499 ~~~l~~~L~~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
..++.+.|.++..+.+.+... ...+++|++++. +++++++.++.|++..
T Consensus 1029 s~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~---~~e~LeeALerL~kf~ 1078 (1082)
T PLN02672 1029 SSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL---EDSEFDRALKAIARFK 1078 (1082)
T ss_pred HHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC---CHHHHHHHHHHHHHHH
Confidence 357888888774455554433 335689999774 6678999998887743
No 294
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.19 E-value=2.1e-08 Score=104.27 Aligned_cols=162 Identities=12% Similarity=-0.012 Sum_probs=98.2
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccch-HHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACTE-LEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~s-~~ka 211 (561)
.+++.+++.++++++ ..++|+|++++...++.+..+ + ++.+++....|. ....
T Consensus 69 ~lr~~ia~~~~~~~~---------~I~it~G~~~al~~~~~~~~~----------~-------gd~V~v~~P~y~~~~~~ 122 (357)
T PRK14809 69 DLTAALADRWDVSPE---------QVWLANGGDGALDYLARAMLD----------P-------GDTVLVPDPGFAYYGMS 122 (357)
T ss_pred HHHHHHHHHhCCCcc---------eEEECCCHHHHHHHHHHHhcC----------C-------CCEEEEeCCChHHHHHH
Confidence 344555666677654 678899988886554433211 0 223444444433 3344
Q ss_pred HHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc--CceEEech
Q psy9807 212 MLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK--DVWLHVDA 286 (561)
Q Consensus 212 a~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~--~~~lhVDa 286 (561)
+...|.+++.+|. . +..+|.+++++.+. .+.+|+.+...+.||.+-|.+++.++++.. +.++++|.
T Consensus 123 ~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De 193 (357)
T PRK14809 123 ARYHHGEVREYPVSKADDFEQTADTVLDAYD---------GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDE 193 (357)
T ss_pred HHHcCCeEEEEecccCcCCCcCHHHHHHhhc---------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEec
Confidence 5677888888887 2 34566666655442 245677778889999999988888877654 78999999
Q ss_pred hcccccccCccccccccCccccceeeecCCcccccc-ccceeEEec
Q psy9807 287 AYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLK 331 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r 331 (561)
+|+... ..+........-++ -.+..++.|.++.| .-+|.+...
T Consensus 194 ~y~~~~-~~~~~~~~~~~~~~-vi~~~SfSK~~~~~GlRiG~~~~~ 237 (357)
T PRK14809 194 AYGEFA-ERPSAVALVEERDD-VAVLRTFSKAYGLAGLRLGYAVVP 237 (357)
T ss_pred hhhhcc-CCchhHHHHhhCCC-EEEEecchhHhcCcchhheeeecC
Confidence 998532 11111111111111 14567899999865 346766653
No 295
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.19 E-value=2.2e-08 Score=103.22 Aligned_cols=226 Identities=14% Similarity=0.054 Sum_probs=131.5
Q ss_pred hhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc
Q psy9807 125 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA 204 (561)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s 204 (561)
+...++.+.+.+|+.+. +.+++ ..++|+|++++...++.+. .++++...
T Consensus 56 ~~~~~Lr~aia~~~~~~-~~~~~---------~i~it~Ga~~~i~~~~~~~---------------------d~v~v~~P 104 (335)
T PRK14808 56 SPDEELIEKILSYLDTD-FLSKN---------NVSVGNGADEIIYVMMLMF---------------------DRSVFFPP 104 (335)
T ss_pred CChHHHHHHHHHHhCCC-CCCcc---------eEEEcCCHHHHHHHHHHHh---------------------CcEEECCC
Confidence 34556666666666543 25443 6788999888876655432 13444444
Q ss_pred c-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceE
Q psy9807 205 C-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWL 282 (561)
Q Consensus 205 ~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~l 282 (561)
. .....+++..|.+++.+|. +++.++... + + .+.+++.+...+.||.+-+.+++.+++ ++++|+
T Consensus 105 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~-~--------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~i 170 (335)
T PRK14808 105 TYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----V-G--------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFV 170 (335)
T ss_pred CHHHHHHHHHHcCCeEEEecCCCcCCCChhH----c-c--------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEE
Confidence 4 5566667889999999998 555544221 2 1 235777888999999999999999998 589999
Q ss_pred EechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcc
Q psy9807 283 HVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHW 361 (561)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (561)
++|.+|.-.. .......+...++ -.+..++.|.++.|. =+|.++. +.+.+.........|
T Consensus 171 i~DE~Y~~f~--~~~~~~~~~~~~~-vi~~~S~SK~~~l~GlRvG~~v~-~~~~~~~l~~~~~~~--------------- 231 (335)
T PRK14808 171 ALDEAYYEFH--GESYVDLLKKYEN-LAVIRTFSKAFSLAAQRIGYVVS-SEKFIDAYNRVRLPF--------------- 231 (335)
T ss_pred EEECchhhhc--CCchHHHHHhCCC-EEEEEechhhccCcccceEEEEe-CHHHHHHHHHhcCCC---------------
Confidence 9999987421 1111111111111 256678999998553 3566665 444443322211111
Q ss_pred cccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccce
Q psy9807 362 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 421 (561)
Q Consensus 362 ~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v 421 (561)
+ .+. +....+..++. ..+.+.+..+...+..+++.+.|++. |+++.. +..+.+
T Consensus 232 ~--~~~-~~q~a~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~-~~g~f~ 284 (335)
T PRK14808 232 N--VSY-VSQMFAKVALD--HREIFEERTKFIVEERERMKSALREM-GYRITD-SRGNFV 284 (335)
T ss_pred C--CCH-HHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECC-CCCeEE
Confidence 0 000 11111122222 12344555666666677888888876 677554 344443
No 296
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.19 E-value=2e-08 Score=104.71 Aligned_cols=313 Identities=13% Similarity=0.008 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---c
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---T 206 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~ 206 (561)
...+..+.|.+++.-+.. .-.+|++|||+||-.|+..||..-. ...++.+... .
T Consensus 100 ~~v~~ae~L~~~~p~~~~--------~~~~f~~sGaeA~E~AiKiAr~~Tg---------------r~~viaf~~afHG~ 156 (447)
T COG0160 100 PYVELAEKLTALAPGSGL--------KKVFFGNSGAEAVEAAIKIARAYTG---------------RPGVIAFDGAFHGR 156 (447)
T ss_pred hHHHHHHHHHHhCCcccC--------CeEEecCCcHHHHHHHHHHHHHHhC---------------CCcEEEECCccccc
Confidence 344455555665443211 2458999999999999999997642 1244554444 1
Q ss_pred hHHHHHHhc----------c---CCeEEeeC-CCCc------------cChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 207 ELEVVMLDW----------L---GKMLDLPK-EFLA------------CSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 207 s~~kaa~~~----------g---~~v~~v~~-~~g~------------~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
+.. ++.+. + ..+..+|- ...+ -..+.+++.|.. ....+..|.++++.-...
T Consensus 157 T~g-alslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~--~~~~~~~vAaiI~EpIQg 233 (447)
T COG0160 157 TLG-ALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFD--LEVGPEEVAAIIIEPIQG 233 (447)
T ss_pred chh-hHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHh--hcCCCCceeEEEEecccC
Confidence 111 11111 1 23677776 2221 234456776766 555566788999998888
Q ss_pred CCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhH
Q psy9807 261 NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWV 336 (561)
Q Consensus 261 ~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l 336 (561)
..|.+.| ++++.++|++||+.+++|..+.|......-+..--.|+ ..|.||+ .|.++.-...|.+..|..-.
T Consensus 234 egG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDivt~--aK~ig~G~Pl~avv~r~ei~- 309 (447)
T COG0160 234 EGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTL--AKSLGGGLPLSAVVGRAEIM- 309 (447)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEEEe--cccccCCCceeEEeccHHhc-
Confidence 8888864 78899999999999999999998766543222222344 5688887 68888767778887765311
Q ss_pred HHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecc
Q psy9807 337 VNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD-DRFEVIYE 415 (561)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~g~~l~~~ 415 (561)
......-. ++-+.+.++.-+++..+....-+.++++..++.++++++|.++ ..+.++.+
T Consensus 310 -~~~~g~~~-------------------~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~Igd 369 (447)
T COG0160 310 -DWPPGGHG-------------------GTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGD 369 (447)
T ss_pred -ccCCcccC-------------------CCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceec
Confidence 11110000 0111233333334433332222367788888899999988764 23333333
Q ss_pred ccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC
Q psy9807 416 VLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP 495 (561)
Q Consensus 416 ~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~ 495 (561)
.. +..+-.+. |++.+..+ -++.
T Consensus 370 VR---------G~Glm~gi-------------------------------------------E~v~d~~t------~~p~ 391 (447)
T COG0160 370 VR---------GLGLMIGV-------------------------------------------ELVKDRDT------KEPD 391 (447)
T ss_pred cc---------ccceEEEE-------------------------------------------EEecCCCC------CCCC
Confidence 21 11111110 00000000 0133
Q ss_pred cHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 496 NEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 496 ~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.+....+.+++.+.|.+..+... ...++|+... -..+++++|..+++|.++.+++
T Consensus 392 ~~~~~~i~~~~~~~Glil~~~G~--~~nviRi~PP-L~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 392 AELAAKIVARAFERGLLLLTCGP--HGNVLRILPP-LTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred HHHHHHHHHHHHHcCCEEeccCC--CCcEEEEeCC-cccCHHHHHHHHHHHHHHHHhh
Confidence 46788999999999986654432 2458999755 4668889999999999887653
No 297
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.18 E-value=1e-08 Score=104.94 Aligned_cols=201 Identities=19% Similarity=0.133 Sum_probs=130.4
Q ss_pred CCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCC
Q psy9807 84 VTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGT 163 (561)
Q Consensus 84 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~g 163 (561)
+..|. |--|||-+ |.+ .+.+...+... .++ ..| +++|.++.+.+.++++.-+ -.-|++|
T Consensus 59 ~~~~G-p~ilGH~~-----p~V-~~Av~~~l~~G-~~f-g~P--te~Ei~~Aell~~~~p~~e----------~vrfvnS 117 (432)
T COG0001 59 VLGWG-PLILGHAH-----PAV-VEAVQEQLERG-LSF-GAP--TELEVELAELLIERVPSIE----------KVRFVNS 117 (432)
T ss_pred hccCc-ccccCCCC-----HHH-HHHHHHHHHhc-CCC-CCC--CHHHHHHHHHHHHhcCccc----------EEEEecc
Confidence 33443 66676664 222 23333333322 222 335 7899999999999987632 3579999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc------chHHHHH----Hh-----ccC------CeEEe
Q psy9807 164 ASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC------TELEVVM----LD-----WLG------KMLDL 222 (561)
Q Consensus 164 gT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~------~s~~kaa----~~-----~g~------~v~~v 222 (561)
||+|++.|+..||..-. .++++.+... +.+.++- .. .|. .++.+
T Consensus 118 GTEAtmsAiRlARa~Tg---------------R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~ 182 (432)
T COG0001 118 GTEATMSAIRLARAYTG---------------RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVL 182 (432)
T ss_pred hhHHHHHHHHHHHHhhC---------------CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEe
Confidence 99999999999986531 2355555444 3444431 01 111 35556
Q ss_pred eCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccc
Q psy9807 223 PKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPEN 298 (561)
Q Consensus 223 ~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~ 298 (561)
| -.|+++|++++++ .|....+|++.-.-.+.|.|-| |+++.++|++||+.|+.|....|+.+.. ..
T Consensus 183 ~----yND~~al~~~~~~-----~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~-gG 252 (432)
T COG0001 183 P----YNDLEALEEAFEE-----YGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVAL-GG 252 (432)
T ss_pred c----CCCHHHHHHHHHH-----cCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCC-cc
Confidence 6 6799999999987 3446778888888888888866 6678889999999999999877643321 11
Q ss_pred cccccCccccceeeecCCccccccccceeEEecCh
Q psy9807 299 RYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDP 333 (561)
Q Consensus 299 ~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~ 333 (561)
....-|+ .+|..++ -|-++.-.++|++..|..
T Consensus 253 aq~~~gi-~PDlttl--GKiIGGGlP~ga~gGr~e 284 (432)
T COG0001 253 AQGYYGV-EPDLTTL--GKIIGGGLPIGAFGGRAE 284 (432)
T ss_pred cccccCc-Ccchhhh--hhhhcCCcceeeeccHHH
Confidence 1111223 3465554 688888888888887653
No 298
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.18 E-value=2.1e-08 Score=107.33 Aligned_cols=222 Identities=14% Similarity=0.013 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.+.++.+.+.+.+..- ....|++|||+||..|+..||..-. .++++.+...
T Consensus 138 ~~~~~~lAe~l~~~~p~~----------~~v~f~~SGsEA~e~AlklAR~~tg---------------r~~Ii~~~g~YH 192 (474)
T PLN02482 138 CLLENVLAEMVIDAVPSV----------EMVRFVNSGTEACMGVLRLARAYTG---------------REKIIKFEGCYH 192 (474)
T ss_pred CHHHHHHHHHHHHhCCCC----------CEEEEeCChHHHHHHHHHHHHHhcC---------------CCEEEEECCccC
Confidence 467777888888876321 1468999999999999999987521 1234443332
Q ss_pred -ch-HHHHHHhc-----------cC------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc
Q psy9807 206 -TE-LEVVMLDW-----------LG------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD 266 (561)
Q Consensus 206 -~s-~~kaa~~~-----------g~------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id 266 (561)
.+ ..-+.... +. .+..+| ..|+++|++.|++ . +..+.+|+..-...+.|.+-
T Consensus 193 G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~nd~~~l~~~l~~--~---~~~iAavI~Epv~g~~G~i~ 263 (474)
T PLN02482 193 GHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP----YNDLEAVKKLFEA--N---KGEIAAVILEPVVGNSGFIV 263 (474)
T ss_pred CCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec----CCChHHHHHHHHh--C---CCceEEEEECCCCCCCCCcC
Confidence 11 00000000 00 112222 3488999998865 2 23567888888888888887
Q ss_pred C----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc
Q psy9807 267 C----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV 342 (561)
Q Consensus 267 p----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~ 342 (561)
| +++|.++|++||+.+++|.++.|. .....+.....++ ..|.+++ .|.++.=+.+|.+..++ +.. ..+..
T Consensus 264 p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav~g~~-ei~-~~~~~ 337 (474)
T PLN02482 264 PKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAYGGRR-EIM-EMVAP 337 (474)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEEEEcH-HHH-Hhhcc
Confidence 7 457999999999999999998764 3322111111234 4687655 89998656678886644 322 22321
Q ss_pred CCCccccCCCCCCCCCCcccccCcCCcchHHH---HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 343 DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKL---WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 343 ~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~l---w~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
...+... .+-....+.. ..+|+.+.. ++..++..++.++|++.|+++
T Consensus 338 ~~~~~~~---------------~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l 387 (474)
T PLN02482 338 AGPMYQA---------------GTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEA 387 (474)
T ss_pred CCCcccc---------------cCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHH
Confidence 1111100 0111222333 334444432 346777788888888888764
No 299
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.18 E-value=4.2e-08 Score=104.68 Aligned_cols=310 Identities=13% Similarity=0.027 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+.+.++.+.|.++++... ....|++|||+||-.|+..||..-. ..+++.+...
T Consensus 84 ~~~~~la~~L~~~~p~~~---------~~v~f~~sGsEAve~AlklAr~~tg---------------r~~ii~~~~~yHG 139 (443)
T PRK08360 84 VEPLLLAEKLIEIAPGDN---------PKVSFGLSGSDANDGAIKFARAYTK---------------RRKILSYLRSYYG 139 (443)
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEcCCHHHHHHHHHHHHHHhcC---------------CCeEEEEeCCcCC
Confidence 344566667777764321 1468999999999999999986521 1234443322
Q ss_pred chHHHHHHhcc------------CCeEEeeC-CCCc------------cChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 206 TELEVVMLDWL------------GKMLDLPK-EFLA------------CSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~-~~g~------------~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
.+.. +..+.+ ..+..+|. +..+ -+++.+++.+++ .. .+..+.+|++.-...
T Consensus 140 ~t~~-a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~-~~~~iAAvi~eP~~~ 215 (443)
T PRK08360 140 STYG-AMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEG--EV-YAEGVAALFAEPIQG 215 (443)
T ss_pred cCHH-HHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHh--cc-CCCCeEEEEECCccC
Confidence 2211 111111 12333433 1111 223455666643 21 123577777776667
Q ss_pred CCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhH
Q psy9807 261 NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWV 336 (561)
Q Consensus 261 ~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l 336 (561)
.+|.+-| +++|.++|++||+++++|.+|.+.......+.....++ ..|.+++ .|.++.-+..|++..+. +..
T Consensus 216 ~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~-~i~ 291 (443)
T PRK08360 216 DAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRA-EIM 291 (443)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcH-HHH
Confidence 7787765 99999999999999999999986433221111111133 3576655 99998545577777653 222
Q ss_pred HHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecc
Q psy9807 337 VNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD-DRFEVIYE 415 (561)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~g~~l~~~ 415 (561)
..+.. ..+. .+.. .-+........+++.+..+ ++.++..++.++|++.|++. ..+.++..
T Consensus 292 -~~~~~-~~~~-------------~T~~-~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~ 352 (443)
T PRK08360 292 -DSLPP-LAHA-------------FTLS-GNPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGD 352 (443)
T ss_pred -hhhcC-CCCC-------------CCCC-cCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 22221 0010 0000 0111222233444444333 35677777888888877653 11222211
Q ss_pred c-cccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecC
Q psy9807 416 V-LMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLK 493 (561)
Q Consensus 416 ~-~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~ 493 (561)
. ..++ +.+.+.+ .+.. + .
T Consensus 353 vrg~Gl~~gie~~~------------------------------------------------------~~~~-----~-~ 372 (443)
T PRK08360 353 VRGIGLMIGVDLVK------------------------------------------------------DRET-----K-E 372 (443)
T ss_pred eeccceEEEEEEec------------------------------------------------------CCcc-----c-C
Confidence 1 1111 1111100 0000 0 0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 494 GPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 494 ~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
+.......+...+.+.|.+. .+. +...+|++.. ...+++||+++++++.++.+++.
T Consensus 373 ~~~~~~~~~~~~l~~~Gi~~-~~~---~~~~lr~~P~-l~~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 373 RAYEEAAKVVWRAWELGLIV-TFF---SGNVLRIQPP-LTIEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred ccHHHHHHHHHHHHHCCeEE-eec---CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 01123456788888888543 321 2357999755 56688999999999999887764
No 300
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.17 E-value=7.2e-08 Score=101.78 Aligned_cols=304 Identities=12% Similarity=0.065 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.|.++.+..+ ...|++|||+||-.|+..||...... +.+ ....+++.+...
T Consensus 82 ~~~~~la~~L~~~~~~~~----------~v~f~~sGseA~e~AlklAr~~~~~~---g~~-----~~r~~ii~~~~~yHG 143 (408)
T PRK04612 82 APPLKLAEELVTASRFAE----------KVFLCNSGTEANEAAIKLVRKWASSQ---GRP-----ADKRVIVTFRGSFHG 143 (408)
T ss_pred HHHHHHHHHHHhhCCCCC----------EEEEcCchHHHHHHHHHHHHHHHHhh---CCC-----CCCcEEEEECCCcCC
Confidence 344566667777653221 46899999999999999999763211 000 001234443333
Q ss_pred chHHHHHHhccC------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HH
Q psy9807 206 TELEVVMLDWLG------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LE 269 (561)
Q Consensus 206 ~s~~kaa~~~g~------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~ 269 (561)
.++. +....+. .++.+| ..|++.|++.++. . .+.+|++.-.....|.+.| ++
T Consensus 144 ~t~~-~~s~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~~~~--~-----~~aavi~eP~~~~gg~~~~~~~~l~ 211 (408)
T PRK04612 144 RTLA-AVTATAQPKYQEGYEPLPGGFRYVD----FNDVEALEAAMAG--G-----DVAAVMLEPIQGEGGVMPAAPGFLA 211 (408)
T ss_pred ccHH-HHHhcCCcccccCCCCCCCCceEcC----CCCHHHHHHhhCC--C-----CEEEEEECCccCCCCCcCCCHHHHH
Confidence 2221 1112111 112222 2377888887753 1 4556666544444444442 99
Q ss_pred HHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCcccc
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
+|.++|++||+++++|.+|.|......-+.....++ ..|.+ ++.|.++.-+..|.++.++. . ...+... .+
T Consensus 212 ~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pdi~--t~~K~l~~G~piga~~~~~~-~-~~~~~~~-~~--- 282 (408)
T PRK04612 212 RVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQV-TPDIV--TLAKALGGGFPIGAMLAGPK-V-AETMQFG-AH--- 282 (408)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCC-CCCEE--EEcchhcCCCceEEEEECHH-H-HhhhcCC-Cc---
Confidence 999999999999999999986433221111111122 23444 45898875455777776542 2 2222210 00
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeccc-cccceeeeccc
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVIYEV-LMGLVCFRLKH 427 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~~~-~~~~v~f~~~~ 427 (561)
..+.. +-+........+++.+-. .++.++..++.++|.+.|+++. .+.++... ..+.+.
T Consensus 283 ----------~~t~~-~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~----- 343 (408)
T PRK04612 283 ----------GTTFG-GNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLML----- 343 (408)
T ss_pred ----------CCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEE-----
Confidence 00111 112222333334444433 3567788888888888887641 12222111 111100
Q ss_pred CccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHH
Q psy9807 428 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRIN 507 (561)
Q Consensus 428 ~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~ 507 (561)
+ +.|. .+.......+.+.+.
T Consensus 344 ----------------------------------------------------------~-i~~~-~~~~~~a~~i~~~l~ 363 (408)
T PRK04612 344 ----------------------------------------------------------G-AVLA-PAHAGQAGAILDLAA 363 (408)
T ss_pred ----------------------------------------------------------E-EEec-CchhhHHHHHHHHHH
Confidence 0 1110 011123456788888
Q ss_pred hCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 508 GNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 508 ~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
+.|.+.. + .|...+|++ .+...+++||+++++.+++...++.+
T Consensus 364 ~~Gvlv~-~---~g~~~lRl~-Ppl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 364 EHGLLLL-Q---AGPDVLRFV-PALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred HCCeEEe-e---CCCCEEEEc-CCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 8885542 2 244689997 44577889999999999998876543
No 301
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.17 E-value=3.5e-08 Score=104.64 Aligned_cols=228 Identities=10% Similarity=-0.060 Sum_probs=124.2
Q ss_pred CCCHHHHHHHHHHhhcCCCCCCCCccccccCC--CCCChHHHHHHHHHhhccc-----cccccccChhhHHHHHHHHHHH
Q psy9807 66 PDTWQEVMSDIERVIMPGVTHWHSPKFHAYFP--TANSYPAIVADILSDSIAC-----IGFTWIASPACTELEVVMLDWL 138 (561)
Q Consensus 66 ~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~l~~~~n~-----~~~~~~~sp~~~~lE~~~~~~l 138 (561)
+..++++.+.+.+.-. .|..+..+.+-. .+..++..+.+.+...++. ....|...+...++-+.+.+|+
T Consensus 14 ~~~~~~~~~~~~~~~~----~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~ 89 (409)
T PRK07590 14 GYLFPEIARRVNAFRE----ANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAEND 89 (409)
T ss_pred cchHHHHHHHHHHHhh----hcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHH
Confidence 3446777666665432 122333322221 1112233344444444432 2334545556677888898998
Q ss_pred HHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccC
Q psy9807 139 GKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLG 217 (561)
Q Consensus 139 a~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~ 217 (561)
.+..|++-+ ....++|+|++++... +.. .+. + ++.+++.... ......+...|.
T Consensus 90 ~~~~g~~~~-------~~~I~it~Ga~~al~~-l~~----~~~------~-------gd~V~v~~P~Y~~~~~~~~~~g~ 144 (409)
T PRK07590 90 YQARGCDIS-------ADEIFISDGAKCDTGN-ILD----IFG------P-------DNTIAVTDPVYPVYVDTNVMAGR 144 (409)
T ss_pred HHhcCCcCC-------hhhEEECCCHHHHHHH-HHH----hcC------C-------CCEEEEeCCCCcchHHHHHHcCC
Confidence 777665422 1256788888777543 221 110 0 2345555555 445556677776
Q ss_pred C-----------eEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcCceE
Q psy9807 218 K-----------MLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWL 282 (561)
Q Consensus 218 ~-----------v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~l 282 (561)
+ ++.+|. .++.+.++. + ++ .+.+|+.+.-.+.||.+-+ +++|+++|++||+|+
T Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~~~~d~-~---~~--------~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~i 212 (409)
T PRK07590 145 TGEANEDGRYSGIVYLPCTAENNFVPEL-P---EE--------KVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLI 212 (409)
T ss_pred cccccccccccceeEeecccccCCcccC-c---cc--------CceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEE
Confidence 5 788887 333333331 1 02 4556666677788898854 566777899999999
Q ss_pred EechhcccccccCccccccccCcccc---ceeeecCCccccccc-cceeEEecChhhH
Q psy9807 283 HVDAAYAGSAFICPENRYLMKGVELA---DSFNFNPHKWMLVTF-DCSAMWLKDPSWV 336 (561)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~a---Dsi~~~~HK~l~~P~-g~g~l~~r~~~~l 336 (561)
++|.+|+-... .......+..++.. -.+..++.|.++.|. =+|.+.. ++..+
T Consensus 213 I~De~Y~~~~~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~-~~~li 268 (409)
T PRK07590 213 LFDAAYEAFIS-DPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVV-PKELK 268 (409)
T ss_pred EEEccchhhcc-CCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEc-CHHHh
Confidence 99999985321 11110111112111 244679999997664 3566655 44333
No 302
>PRK07678 aminotransferase; Validated
Probab=99.16 E-value=4.8e-08 Score=104.50 Aligned_cols=321 Identities=14% Similarity=0.122 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+.+.++.+.|.++++... ...|++|||+||..|+..||...... +.+ ...+++.+...
T Consensus 89 ~~~~~lae~l~~~~~~~~----------~v~f~~sGseA~e~AlklAr~~t~~~---g~~------~r~~ii~~~~~yHG 149 (451)
T PRK07678 89 EPAIKLAEKLNEWLGGEY----------VIFFSNSGSEANETAFKIARQYHAQK---GEP------HRYKFISRYRAYHG 149 (451)
T ss_pred HHHHHHHHHHHHhCCCCC----------EEEEeCCcHHHHHHHHHHHHHHHHhc---CCC------CCcEEEEECCCcCC
Confidence 344556667777764421 46899999999999999999753211 000 01234433332
Q ss_pred chHHHHHHhcc------------CCeEEeeC-CCCc---------cCh---hhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 206 TELEVVMLDWL------------GKMLDLPK-EFLA---------CSG---GKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~-~~g~---------~d~---~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
.+.. +..+.+ ..+..+|. +..+ .|. +.+++.|+. . .+..+.+|++.-...
T Consensus 150 ~t~~-als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~--~~~~iAAvi~EPiqg 224 (451)
T PRK07678 150 NSMG-ALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTW--E--LSETIAAVIMEPIIT 224 (451)
T ss_pred ccHH-HhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHh--c--CCCceEEEEEccccC
Confidence 2211 111111 12334443 2111 122 234555642 1 123567777766666
Q ss_pred CCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhh
Q psy9807 261 NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSW 335 (561)
Q Consensus 261 ~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~ 335 (561)
..|.+-| ++++.++|++||+.+++|..+.|......-+..-..|+ ..|.+++ -|.|+.= +..|++.+++.
T Consensus 225 ~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~-- 299 (451)
T PRK07678 225 GGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--AKGITSAYLPLSATAVKKE-- 299 (451)
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--ecccccCCcceeEEEEcHH--
Confidence 6677765 99999999999999999999866533321111111244 4798876 8988764 35788888654
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC-CCeE
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD-DRFE 411 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~g~~ 411 (561)
+...+.....+- .+....+-....+.+. ++++.+-.+ .+.++..++.++|.+.|++. ....
T Consensus 300 i~~~~~~~~~~~------------~~~h~~T~~gnp~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~~~~ 364 (451)
T PRK07678 300 IYEAFKGKGEYE------------HFRHVNTFGGNPAACALALKNLEIMENE---NLIERSAQLGELLLEQLKEELGEHP 364 (451)
T ss_pred HHHHHhccCccc------------ccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 222232111100 0000011112333333 334444333 45667777778888777542 1111
Q ss_pred Eeccc-ccc-ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhccee
Q psy9807 412 VIYEV-LMG-LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 489 (561)
Q Consensus 412 l~~~~-~~~-~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~ 489 (561)
++... ..+ ++.+.+.. ++.
T Consensus 365 ~v~~vrg~Gl~~~i~~~~------------------------------------------------------~~~----- 385 (451)
T PRK07678 365 LVGDIRGKGLLVGIELVN------------------------------------------------------DKE----- 385 (451)
T ss_pred CEEEEEeeceEEEEEEec------------------------------------------------------CCc-----
Confidence 11111 111 11111100 000
Q ss_pred eecCCCcHHHHHHHHHHHhCCcEEEE--eeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 490 FRLKGPNEINEKLLKRINGNGKIHLV--PSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 490 f~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.+.+........+...+.++|.+... +++..+..++|++.. ...|++||+++++++.++.+++
T Consensus 386 ~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Pp-l~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 386 TKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPP-LVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred ccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECC-CcCCHHHHHHHHHHHHHHHHhc
Confidence 00001223456788889999865422 122233468999855 4557889999999998887653
No 303
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.16 E-value=3.4e-08 Score=105.03 Aligned_cols=201 Identities=12% Similarity=-0.038 Sum_probs=108.5
Q ss_pred HHHHHHHHhhccccc-----cccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHH
Q psy9807 104 AIVADILSDSIACIG-----FTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAK 178 (561)
Q Consensus 104 ~~~~~~l~~~~n~~~-----~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~ 178 (561)
..+.+.+...++... ..|.......++-+.+.+|+.+..|.+-+ ....++|+|++++...++.+....
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~-------~~~I~it~Ga~~al~~~~~~l~~~ 120 (416)
T PRK09440 48 DYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNIS-------PQNIALTNGSQSAFFYLFNLFAGR 120 (416)
T ss_pred HHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCC-------hhhEEEccChHHHHHHHHHHHhcc
Confidence 445555555544321 22333333467888899999887775421 125788888888765554432110
Q ss_pred HHHHHHhcCCCCCCcccccceEE-ecccch-HHHHHHhcc----CCeEEeeC-C---CCccChhhHHHHHhhhchhhcCC
Q psy9807 179 TMQRVKEAHPDWKDSDIIANLIA-SPACTE-LEVVMLDWL----GKMLDLPK-E---FLACSGGKGGGVIQRKSDREMCS 248 (561)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~vv-~~s~~s-~~kaa~~~g----~~v~~v~~-~---~g~~d~~~Le~~i~~~~~~~~g~ 248 (561)
. ..+ .++.+++ ....|. ....+...+ .....++. . ...+|+++|+ +.+
T Consensus 121 ~-----~~~-------~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~-------- 178 (416)
T PRK09440 121 R-----ADG-------SLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE-------- 178 (416)
T ss_pred c-----cCC-------CCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC--------
Confidence 0 000 0124444 233332 233332222 22233344 2 3578999887 323
Q ss_pred ceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-
Q psy9807 249 DLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD- 324 (561)
Q Consensus 249 ~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g- 324 (561)
.+.+++.+.-.+.||.+-+ +++|+++|++||+|+++|.+|+-.. ....+.........-=.+..+++|. +.|.-
T Consensus 179 ~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~-~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlR 256 (416)
T PRK09440 179 DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPF-PGIIFSEATPLWNPNIILCMSLSKL-GLPGVR 256 (416)
T ss_pred CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccC-CCcchhhcCccccCCeEEEeccccc-CCCcce
Confidence 3456777777889999865 7788889999999999999996311 0000111001011112456799996 55543
Q ss_pred ceeEEecChhhH
Q psy9807 325 CSAMWLKDPSWV 336 (561)
Q Consensus 325 ~g~l~~r~~~~l 336 (561)
+|.+.. ++..+
T Consensus 257 iG~~i~-~~~l~ 267 (416)
T PRK09440 257 CGIVIA-DEEII 267 (416)
T ss_pred EEEEeC-CHHHH
Confidence 565554 54433
No 304
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.15 E-value=1.9e-08 Score=107.07 Aligned_cols=227 Identities=16% Similarity=0.122 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
...+.++.+++++++.-. ...+|+.|||+||..|+..||.... ..+++.+... +
T Consensus 89 ~~~~~~la~~L~~~~~~~----------~~v~~~~sGseA~e~Aik~a~~~~g---------------~~~ii~~~~~yH 143 (426)
T PRK00062 89 TELEVELAELVIELVPSI----------EMVRMVNSGTEATMSAIRLARGYTG---------------RDKIIKFEGCYH 143 (426)
T ss_pred CHHHHHHHHHHHHhCCCC----------CEEEEecCHHHHHHHHHHHHHHHhC---------------CCeEEEEcCccC
Confidence 345566777777775211 1468999999999999999987521 1244444443 1
Q ss_pred hHHHHH-Hh--------c----cCCeEEe-e-C-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---
Q psy9807 207 ELEVVM-LD--------W----LGKMLDL-P-K-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC--- 267 (561)
Q Consensus 207 s~~kaa-~~--------~----g~~v~~v-~-~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp--- 267 (561)
-...++ .. . +.....+ + . ..-..|+++|++.+++ . +..+.+|++.....++|.+-|
T Consensus 144 G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~--~---~~~~aaiivEpv~~~~G~~~~~~~ 218 (426)
T PRK00062 144 GHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEE--Y---GDEIAAVIVEPVAGNMGVVPPKPG 218 (426)
T ss_pred CchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHh--C---CCcEEEEEEeCCcCCCCCcCCCHH
Confidence 111111 11 0 0000001 0 0 1113578999998865 2 225677888878888999988
Q ss_pred -HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccC-CC
Q psy9807 268 -LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVD-PL 345 (561)
Q Consensus 268 -l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~-~~ 345 (561)
+++|.++|++||+++++|.+|.|. ...........++ ..|.+ +..|.++.-+..|++..++ + +...+... ..
T Consensus 219 ~l~~l~~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~-~pDi~--~~gK~l~~G~p~ga~~~~~-~-i~~~~~~~~~~ 292 (426)
T PRK00062 219 FLEGLRELCDEHGALLIFDEVMTGF-RVALGGAQGYYGV-TPDLT--TLGKIIGGGLPVGAFGGRR-E-IMEQLAPLGPV 292 (426)
T ss_pred HHHHHHHHHHHcCCEEEEeechhcc-ccCCccHHHHhCC-CcchH--hhhhHhhCCCcceeeeEHH-H-HHHhhccCCCc
Confidence 999999999999999999999865 3322111111122 24654 4579987534466665543 2 22323211 11
Q ss_pred ccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy9807 346 YLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS 406 (561)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 406 (561)
|.... . ..-+........+++.+..+ +..++..++.+++++.|++
T Consensus 293 ~~~~T------------~-~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~ 337 (426)
T PRK00062 293 YQAGT------------L-SGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKE 337 (426)
T ss_pred eeccc------------C-cCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHH
Confidence 11100 0 11112223333445544332 4566777777777777764
No 305
>PRK06062 hypothetical protein; Provisional
Probab=99.14 E-value=7.3e-08 Score=103.03 Aligned_cols=173 Identities=10% Similarity=0.003 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++...++.+.|.++..-+- ....|++|||+||-.|+..||..-. ..+++.....
T Consensus 94 ~~~~~~lae~L~~~~p~~~---------~~v~f~~SGsEAve~AlklAr~~tg---------------r~~ii~~~~~yH 149 (451)
T PRK06062 94 NDARSEAARLIAERAPGDL---------SKVFFTNGGADANEHAVRMARLHTG---------------RPKVLSAYRSYH 149 (451)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEcCChHHHHHHHHHHHHHhhC---------------CceEEEEeCCCC
Confidence 3445566667777653211 2468999999999999999987521 1234443322
Q ss_pred -chHHHHHHhcc-----------CCeEEeeC-CCCc------cC-------hhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 206 -TELEVVMLDWL-----------GKMLDLPK-EFLA------CS-------GGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 206 -~s~~kaa~~~g-----------~~v~~v~~-~~g~------~d-------~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
.+.. +..+.+ ..+..++. ...+ .| ++.|++.|+. . .+..+.+|++.-..
T Consensus 150 G~t~~-als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~--~--~~~~iAaviiEPv~ 224 (451)
T PRK06062 150 GGTGS-AINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIEL--E--GPSTIAAILLESVP 224 (451)
T ss_pred CCCHH-HHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHh--c--CCCceEEEEEcccc
Confidence 2211 111111 12233332 1111 23 5677777753 1 11356778887777
Q ss_pred CCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecC
Q psy9807 260 TNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKD 332 (561)
Q Consensus 260 t~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~ 332 (561)
.+.|.+-| +++|.++|++||+.+++|..+.|......-+..-..|+ ..|.+++ .|.++.=+ ..|+++.++
T Consensus 225 g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~ 299 (451)
T PRK06062 225 GTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISE 299 (451)
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcH
Confidence 78899989 99999999999999999999887533322111111244 4687764 89988643 567777765
No 306
>KOG0259|consensus
Probab=99.14 E-value=1.6e-07 Score=93.29 Aligned_cols=372 Identities=12% Similarity=0.047 Sum_probs=210.5
Q ss_pred CHHHHHHHHHHhhcCCC------CCCCCccccccCCCCCChHHHHHHHHHhh-ccccccccccChhhHHHHHHHHHHHHH
Q psy9807 68 TWQEVMSDIERVIMPGV------THWHSPKFHAYFPTANSYPAIVADILSDS-IACIGFTWIASPACTELEVVMLDWLGK 140 (561)
Q Consensus 68 ~~~~il~~~~~~~~~~~------~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~~~~~sp~~~~lE~~~~~~la~ 140 (561)
.+..++..+.....+.. .+...|.-|+.+.+.......+.+.+.+. .| +|..+...-.--+++.+.+.+
T Consensus 43 tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N----~Yaps~G~~~AR~AVAeYl~~ 118 (447)
T KOG0259|consen 43 TIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGN----GYAPSVGILPARRAVAEYLNR 118 (447)
T ss_pred cHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCC----CcCCccccHHHHHHHHHHhhc
Confidence 34455555544333322 12345666776665544443344443332 23 344444433334455555444
Q ss_pred hcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccchHHHHH-HhccCCe
Q psy9807 141 MLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACTELEVVM-LDWLGKM 219 (561)
Q Consensus 141 l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~s~~kaa-~~~g~~v 219 (561)
-+..+-+ ..+.++|+|.++|.-+++.+.-+. +..+.+....+++..+. ...+.++
T Consensus 119 ~l~~kl~-------a~DV~ltsGC~qAIe~~i~~LA~p-----------------~aNILlPrPGfp~Y~~~a~~~~lEV 174 (447)
T KOG0259|consen 119 DLPNKLT-------ADDVVLTSGCSQAIELAISSLANP-----------------GANILLPRPGFPLYDTRAIYSGLEV 174 (447)
T ss_pred CCCCccC-------cCceEEeccchHHHHHHHHHhcCC-----------------CCceecCCCCCchHHHhhhhcCcee
Confidence 3333211 236799999999988877653211 23455555558888874 6678899
Q ss_pred EEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHHHHHhhcCceEEechhcccccc
Q psy9807 220 LDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAF 293 (561)
Q Consensus 220 ~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~ 293 (561)
|.... .++++|++.+|..+++ .++++++.--.+.+|.+ +-|++|+++|+++++.++.|..|+- .+
T Consensus 175 R~ydlLPe~~weIDL~~veal~DE--------NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~-~v 245 (447)
T KOG0259|consen 175 RYYDLLPEKDWEIDLDGVEALADE--------NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGH-TV 245 (447)
T ss_pred EeecccCcccceechHHHHHhhcc--------CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcce-ee
Confidence 98877 7899999999999988 56667766666666665 6899999999999999999999874 33
Q ss_pred cCccccccccCc-cccceee-ecCCccccccc-cceeEEecChhh-HHHhh--ccCCCccccCCCCCCCCCCcccccCcC
Q psy9807 294 ICPENRYLMKGV-ELADSFN-FNPHKWMLVTF-DCSAMWLKDPSW-VVNAF--NVDPLYLKHDQQGSAPDYRHWQIPLGR 367 (561)
Q Consensus 294 ~~~~~~~~~~gi-~~aDsi~-~~~HK~l~~P~-g~g~l~~r~~~~-l~~~~--~~~~~yl~~~~~~~~~~~~~~~~~~sr 367 (561)
|.+.----+..+ ..+-.++ .+..|...+|. =.|-+.+-|+.- ++... ..-..++... .+. .
T Consensus 246 fg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~-----~~p-------~- 312 (447)
T KOG0259|consen 246 FGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDII-----PGP-------A- 312 (447)
T ss_pred cCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhcc-----CCc-------c-
Confidence 332111001111 1123333 34467666663 466666655421 11000 0000111000 000 0
Q ss_pred CcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHH
Q psy9807 368 RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRL 447 (561)
Q Consensus 368 ~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~ 447 (561)
.+---++=..|..-..+-+...+.-...++..-.++|+++|++.+...|+..+-.. .+..
T Consensus 313 TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylm--v~l~------------------ 372 (447)
T KOG0259|consen 313 TIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLM--VKLN------------------ 372 (447)
T ss_pred HhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEE--eccc------------------
Confidence 00000111122223355677777888889999999999999998766655544111 0000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEE-EeeeECCEEEEE
Q psy9807 448 LGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHL-VPSKIRDVYFLR 526 (561)
Q Consensus 448 ~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~g~~~lR 526 (561)
+ -.| +.-+....++.+|..+-.+++ .++...-.+++|
T Consensus 373 -------------------------------------~--s~~---~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~R 410 (447)
T KOG0259|consen 373 -------------------------------------L--SLF---PDIEDDVDFCQKLAREESVICLPGQAFGLKNWLR 410 (447)
T ss_pred -------------------------------------h--hhh---ccccccHHHHHHHhhhcceEEeccccccCCCeEE
Confidence 0 001 011112367777766655554 445555678999
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 527 MAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 527 ~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
++++. ..+.+++.++.|++-..+..
T Consensus 411 i~i~~---~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 411 IVITV---EEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred EEEcc---ChHHHHHHHHHHHHHHHhhh
Confidence 99765 45789999999998887755
No 307
>PRK08637 hypothetical protein; Provisional
Probab=99.14 E-value=2.8e-08 Score=104.59 Aligned_cols=154 Identities=9% Similarity=-0.051 Sum_probs=91.4
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccc-hHHHHH-HhccCCeEEeeC--CCCccChh
Q psy9807 157 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACT-ELEVVM-LDWLGKMLDLPK--EFLACSGG 232 (561)
Q Consensus 157 ~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~-s~~kaa-~~~g~~v~~v~~--~~g~~d~~ 232 (561)
..++|+|++++....+.+..+ + ++.+++....| .....+ ...|.+++.+|. +++.+|++
T Consensus 71 ~I~it~G~~~al~~~~~~l~~----------~-------gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~ 133 (388)
T PRK08637 71 LPIVTNALTHGLSLVADLFVD----------Q-------GDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTD 133 (388)
T ss_pred eeeEccchHHHHHHHHHHhcC----------C-------CCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHH
Confidence 457888888887555443211 0 22444444443 344443 357889999997 56789999
Q ss_pred hHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHHHHhh-----cCceEEechhcccccccCcccccccc-
Q psy9807 233 KGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQVCRQ-----KDVWLHVDAAYAGSAFICPENRYLMK- 303 (561)
Q Consensus 233 ~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~ia~~-----~~~~lhVDaA~gg~~~~~~~~~~~~~- 303 (561)
+|++.++. ... ....+++.+.-.+.||.+- .+++|+++|++ |++++++|.+|.....-.........
T Consensus 134 ~l~~~~~~--~~~--~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~ 209 (388)
T PRK08637 134 ALKEALQA--AYN--KGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAA 209 (388)
T ss_pred HHHHHHHh--hcc--CCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHH
Confidence 99998862 100 1234555666688888774 56667777764 89999999998754321111111111
Q ss_pred --Cc-cccceee-ecCCcccccccc-ceeEEec
Q psy9807 304 --GV-ELADSFN-FNPHKWMLVTFD-CSAMWLK 331 (561)
Q Consensus 304 --gi-~~aDsi~-~~~HK~l~~P~g-~g~l~~r 331 (561)
+. ++.-.+. .++.|.++.|.- +|.+.+.
T Consensus 210 ~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 210 LANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred hhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 11 1111232 289998777754 7777764
No 308
>PLN02368 alanine transaminase
Probab=99.14 E-value=1.9e-08 Score=106.01 Aligned_cols=258 Identities=10% Similarity=0.001 Sum_probs=155.1
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|..+....++-+.+.+|+.+..|++-+ ....++|+|++++...++.+.... + ++.+
T Consensus 102 ~Y~~~~G~~~LR~aia~~~~~~~g~~~~-------~~~I~it~Ga~~al~~~~~~l~~~---------p-------Gd~V 158 (407)
T PLN02368 102 AYSDSRGLPGVRKEVAEFIERRDGYPSD-------PELIFLTDGASKGVMQILNAVIRG---------E-------KDGV 158 (407)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCC-------hhhEEEcccHHHHHHHHHHHHcCC---------C-------CCEE
Confidence 3444444467888999999988786421 126789999988876655543100 0 2345
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIG 272 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~ 272 (561)
++.... ......+...|++++.+|+ . ++.+|++.|++.+.+ ....+.++.+++.+.-.+.||.+- .+++|+
T Consensus 159 li~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~--~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~ 236 (407)
T PLN02368 159 LVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQ--ARSKGITVRAMVIINPGNPTGQCLSEANLREIL 236 (407)
T ss_pred EEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHH--HhhcCCCeEEEEEECCCCCCCccCCHHHHHHHH
Confidence 555555 5566667888899999998 3 468999999999975 433333567777777788999885 566677
Q ss_pred HHHhhcCceEEechhcccccccCc-cc---cccccCc----cc--cceeeecCCccc-cccc-cceeEEe--cChhhHHH
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICP-EN---RYLMKGV----EL--ADSFNFNPHKWM-LVTF-DCSAMWL--KDPSWVVN 338 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~-~~---~~~~~gi----~~--aDsi~~~~HK~l-~~P~-g~g~l~~--r~~~~l~~ 338 (561)
++|++||+|++.|.+|+-...-.. .. ......+ +. -=.+..+++|.+ +.|. =+|.+.. .+...+..
T Consensus 237 ~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~ 316 (407)
T PLN02368 237 KFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEE 316 (407)
T ss_pred HHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHH
Confidence 789999999999999875332110 11 1111111 11 124567889998 4453 3676664 34444433
Q ss_pred hhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh------------HHHHHHHHHHHHHHHHHHHHHHhc
Q psy9807 339 AFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG------------VKYLQEYIRKQISLAKEFEQLVRS 406 (561)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g------------~~g~~~~~~~~~~la~~l~~~l~~ 406 (561)
..... .... + ...+..+++...+. .+..+++++...+..+.+.+.|++
T Consensus 317 ~~~~~--~~~~----------------~--~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~ 376 (407)
T PLN02368 317 IYKVA--SIAL----------------S--PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNS 376 (407)
T ss_pred HHHHh--cccC----------------C--CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 22211 0000 0 11122223333331 112234566777788889999999
Q ss_pred CCCeEEeccccccceee
Q psy9807 407 DDRFEVIYEVLMGLVCF 423 (561)
Q Consensus 407 ~~g~~l~~~~~~~~v~f 423 (561)
+||+.+.. |+.+...|
T Consensus 377 ~~g~~~~~-P~Gafy~~ 392 (407)
T PLN02368 377 CKNVVCNF-TEGAMYSF 392 (407)
T ss_pred CCCeEeCC-CCeeeEec
Confidence 99988754 44444333
No 309
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.14 E-value=4.3e-08 Score=101.13 Aligned_cols=244 Identities=12% Similarity=0.038 Sum_probs=160.2
Q ss_pred ceEEecccchHHH-HHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 198 NLIASPACTELEV-VMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 198 ~~vv~~s~~s~~k-aa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
++++....|+... .++..|++++.+|. + +.+|++.+...+.+ .+.+|.++.-++-||..-+.++|.+++
T Consensus 101 ~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~--------~~~lv~i~nPNNPTG~~~~~~~l~~l~ 171 (356)
T COG0079 101 TVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRD--------KTKLVFLCNPNNPTGTLLPREELRALL 171 (356)
T ss_pred EEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhhc--------CCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 3444433455544 56889999999999 6 99999999998876 567888888999999998888888887
Q ss_pred hhc--CceEEechhcccccccCccccccccCccccc--eeeecCCcccccccc-ceeEEecChhhHHHhhccCCCccccC
Q psy9807 276 RQK--DVWLHVDAAYAGSAFICPENRYLMKGVELAD--SFNFNPHKWMLVTFD-CSAMWLKDPSWVVNAFNVDPLYLKHD 350 (561)
Q Consensus 276 ~~~--~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aD--si~~~~HK~l~~P~g-~g~l~~r~~~~l~~~~~~~~~yl~~~ 350 (561)
... +.+++||.||.=+.- +..-.++. ..+ .+.=++.|.++.+.- +|. .+.+++.+........+|-
T Consensus 172 ~~~~~~~~vVvDEAY~eF~~--~~~~~l~~---~~~nlivlRTfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~--- 242 (356)
T COG0079 172 EALPEGGLVVIDEAYIEFSP--ESSLELLK---YPPNLIVLRTFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFN--- 242 (356)
T ss_pred HhCCCCcEEEEeCchhhcCC--chhhhhcc---CCCCEEEEEecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCC---
Confidence 754 789999999873221 11111111 113 566788998876654 444 5557666655444444541
Q ss_pred CCCCCCCCCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCc
Q psy9807 351 QQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQ 429 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~ 429 (561)
...+...++...+. .+-+++.+++.....+++.+.|+.++ +.-+.+...|-|.++.
T Consensus 243 ------------------v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~---- 299 (356)
T COG0079 243 ------------------VSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRV---- 299 (356)
T ss_pred ------------------CCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEEC----
Confidence 12223333333332 35677788888888999999999885 5423344455544422
Q ss_pred cccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC
Q psy9807 430 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN 509 (561)
Q Consensus 430 ~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~ 509 (561)
.. .. ...+.+.|.+.
T Consensus 300 ---------------------------------------------------------------~~-~~-~~~l~~~L~~~ 314 (356)
T COG0079 300 ---------------------------------------------------------------PD-AE-AAALAEALLKK 314 (356)
T ss_pred ---------------------------------------------------------------CC-cc-HHHHHHHHHHC
Confidence 11 22 44688899898
Q ss_pred CcEEEEeee-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 510 GKIHLVPSK-IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 510 g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
|.+.-.... .....++|+++. ++++-++++++|.++.+
T Consensus 315 giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~ 353 (356)
T COG0079 315 GILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLK 353 (356)
T ss_pred CEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHh
Confidence 876654433 223569999977 34566999999988754
No 310
>PRK06105 aminotransferase; Provisional
Probab=99.14 E-value=1.1e-07 Score=102.04 Aligned_cols=324 Identities=11% Similarity=0.045 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.+.++.+.|++++..+- ....|++|||+||-.|+..||.....+ +.+ ...+++.....
T Consensus 91 ~~~~~~lae~L~~~~p~~~---------~~v~f~~SGseAve~AlKlar~~~~~~---g~t------~r~~il~~~~~yH 152 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPM---------SKVFFTNSGSEANDTVVKLVWYYNNAL---GRP------EKKKIISRQRGYH 152 (460)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEeCCcHHHHHHHHHHHHHHHHhc---CCC------CCcEEEEecCccC
Confidence 3445556667777764221 146899999999999999998642111 000 01233333222
Q ss_pred -chHHHHHHhcc------------CCeEEeeC-CCCcc-------------ChhhHHHHHhhhchhhcCCceEEEEEecC
Q psy9807 206 -TELEVVMLDWL------------GKMLDLPK-EFLAC-------------SGGKGGGVIQRKSDREMCSDLLQVVATLG 258 (561)
Q Consensus 206 -~s~~kaa~~~g------------~~v~~v~~-~~g~~-------------d~~~Le~~i~~~~~~~~g~~p~~vv~t~g 258 (561)
.+.. +..+.+ ..+..+|. ...+. ..++|++.+.. . ....+.+|++.-.
T Consensus 153 G~t~~-a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~--~--~~~~iAavIvEPi 227 (460)
T PRK06105 153 GVTIA-SASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILA--E--GPDTIAAFIGEPV 227 (460)
T ss_pred Ccchh-heeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHH--c--CCCceEEEEEccc
Confidence 2211 111111 12333332 11111 13566766643 1 1235778888777
Q ss_pred CCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecCh
Q psy9807 259 TTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDP 333 (561)
Q Consensus 259 tt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~ 333 (561)
....|.+-| ++++.++|++||+.+++|..+.|......-+..-..++ ..|.+++ .|.++.- .+.|+++.++.
T Consensus 228 qg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~~--gK~lggG~~P~~av~~~~~ 304 (460)
T PRK06105 228 MGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILVM--SKQLSSSYQPLSAVLMNEK 304 (460)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeeee--ecccccCcccceEEEEcHH
Confidence 777788888 99999999999999999999866544332221112244 3687755 7888753 24677777543
Q ss_pred hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHH---HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 334 SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKL---WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~l---w~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
+...+....... ..+....+-....+.. .++|+.+-. ++.+++..++.++|.+.|+++...
T Consensus 305 --i~~~~~~~~~~~-----------~~~~h~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~~~ 368 (460)
T PRK06105 305 --VYDPIADESGKI-----------GTFGHGFTASGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQARLRALADH 368 (460)
T ss_pred --HHHHHhcccccC-----------cccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcC
Confidence 222232111000 0000011112233333 334444443 356778888888998888865322
Q ss_pred EEeccc-cccce-eeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcce
Q psy9807 411 EVIYEV-LMGLV-CFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 488 (561)
Q Consensus 411 ~l~~~~-~~~~v-~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v 488 (561)
.++... ..+.+ .+.+.+.. ..+ .
T Consensus 369 ~~v~~vrG~Gl~~gie~~~~~--~~~-----------------------------------------------------~ 393 (460)
T PRK06105 369 PLVGEVRGVGLIAAVELVADK--ATK-----------------------------------------------------T 393 (460)
T ss_pred CCeEEEEecceEEEEEEecCc--ccC-----------------------------------------------------C
Confidence 222111 11111 11111000 000 0
Q ss_pred eeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 489 CFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 489 ~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
.| .........+...+.+.|.+. .+. + .++|++.. ...+++||+++++.+.++.+++.+.
T Consensus 394 ~~--~~~~~~a~~i~~~~~~~Gvl~-~~~---g-~~i~l~Pp-l~it~~eid~~~~~l~~~l~~~~~~ 453 (460)
T PRK06105 394 PF--EPPGKVGARANAAAHEHGVIS-RAM---G-DTLAFCPP-LIITAAQVDEMVDRFGRALDDVAAW 453 (460)
T ss_pred CC--CchhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-CccCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 001123356778888888554 332 2 37998744 4568899999999999998876553
No 311
>PRK06148 hypothetical protein; Provisional
Probab=99.13 E-value=9.2e-08 Score=111.60 Aligned_cols=312 Identities=14% Similarity=0.029 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.+.++.+.|++++.-+- ....|++|||+||-.|+..||..-. .++++.+...
T Consensus 662 ~~~~~~lAe~L~~~~p~~~---------~~v~f~nSGsEA~e~AlklAr~~tG---------------r~~ii~~~~~YH 717 (1013)
T PRK06148 662 HDAIVAYAERLTATLPDGL---------TVAFFVNSGSEANSLALRLARAHTG---------------QRDAIVLDHAYH 717 (1013)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCCcHHHHHHHHHHHHHhcC---------------CCeEEEEcCCcc
Confidence 3455666777777763211 1458999999999999999986521 1234443322
Q ss_pred -chHH-------HHHHhcc----CCeEEeeC-CCCc--c---C-------hhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 206 -TELE-------VVMLDWL----GKMLDLPK-EFLA--C---S-------GGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 206 -~s~~-------kaa~~~g----~~v~~v~~-~~g~--~---d-------~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
.+.. +.-.-.+ ..+..++. +..+ . + .+.+++.|+. ....+..+.+|++.-...
T Consensus 718 G~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~~~~~~iAAvI~EPv~g 795 (1013)
T PRK06148 718 GTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAA--MAAKGRGPAFFIAESIPS 795 (1013)
T ss_pred CCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHh--hhccCCceEEEEEcCCcC
Confidence 1111 0000001 12333332 1111 1 1 2456666643 222344677888877777
Q ss_pred CCccccC----HHHHHHHHhhcCceEEechhcccccccCcc-ccccccCccccceeeecCCccccccccceeEEecChhh
Q psy9807 261 NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPE-NRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSW 335 (561)
Q Consensus 261 ~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~-~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~ 335 (561)
..|.+-| ++++.++|++||+.+++|..+.|....... +..-..|+ ..|.+++ -|.++.=+..|++..++.
T Consensus 796 ~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~--gK~lggG~Plgav~~~~e-- 870 (1013)
T PRK06148 796 VAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHPMGAVVTTRE-- 870 (1013)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeee--cccccCCcceEEEEEcHH--
Confidence 7788877 999999999999999999998765433321 11111244 4788777 899887677888888643
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeE
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFE 411 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~ 411 (561)
+...+.....|. .+-....+..- ++++.+..+ .+.++..++.++|++.|+++. ...
T Consensus 871 i~~~~~~g~~~~-----------------~Tf~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~ 930 (1013)
T PRK06148 871 IADSFDNGMEYF-----------------NTFGGNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRELQDRFD 930 (1013)
T ss_pred HHhhccCCCccc-----------------cCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 222232111110 11112333333 334444333 456677778888888887631 111
Q ss_pred Eeccc-cccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhccee
Q psy9807 412 VIYEV-LMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 489 (561)
Q Consensus 412 l~~~~-~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~ 489 (561)
++... ..+. +.+.+. .++..
T Consensus 931 ~i~~VrG~Gl~~gvel~------------------------------------------------------~~~~~---- 952 (1013)
T PRK06148 931 IIGDVRGMGLFLGIELV------------------------------------------------------TDRKT---- 952 (1013)
T ss_pred CceEEeeeceEEEEEec------------------------------------------------------CCccc----
Confidence 11111 0111 011000 00000
Q ss_pred eecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 490 FRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 490 f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
..+..+....+.+.+.+.|.+. .++... ..++|+... ..++++|||++++++.++..++
T Consensus 953 --~~~~~~~~~~i~~~~~~~Gvl~-~~~g~~-~~vlr~~Pp-l~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 953 --KAPATAIARYVKNGARERGILI-GTEGPH-DNVLKIRPP-LIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred --cCccHHHHHHHHHHHHhCCeEE-eccCCC-CCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 0011234567888898988554 433222 358999744 5678899999999999987664
No 312
>KOG0256|consensus
Probab=99.13 E-value=1.3e-08 Score=101.72 Aligned_cols=321 Identities=14% Similarity=0.128 Sum_probs=198.2
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
...+-+++++.+.+.-|-+..|-. ...+++.|+|.+|-+.+.+..+ | +....|.+..
T Consensus 123 l~~frqa~A~Fm~~~r~~~v~fdP-----~~~Vv~~G~T~ane~l~fcLad----------p-------gdafLvPtPyY 180 (471)
T KOG0256|consen 123 LPSFRQAVAEFMERARGNRVKFDP-----ERVVVTNGATSANETLMFCLAD----------P-------GDAFLVPTPYY 180 (471)
T ss_pred chHHHHHHHHHHHHHhCCCCccCc-----cceEEecccchhhHHHHHHhcC----------C-------CceeeecCCCC
Confidence 346777888888888777655422 3578999999998665444221 1 2234555554
Q ss_pred chHHHHH-HhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHHHHhhc
Q psy9807 206 TELEVVM-LDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQVCRQK 278 (561)
Q Consensus 206 ~s~~kaa-~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~ia~~~ 278 (561)
.-+.+-+ ...|++++.|.+ +..++++++||.++++ .++.+.+..-|+++-.++..|.+- -|..+..+|.++
T Consensus 181 ~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~--A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k 258 (471)
T KOG0256|consen 181 PGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQ--ARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK 258 (471)
T ss_pred CcccccceeccCceEEEEEeecCCCccccHHHHHHHHHH--HHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc
Confidence 3444433 457888888888 5679999999999999 999999999999988888888875 466666778899
Q ss_pred CceEEechhcccccccCccccccccCcc----ccc--eeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCC
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYLMKGVE----LAD--SFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~~~gi~----~aD--si~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
|+.+++|.-|++...-.++++..++-.. ..| -|.++..|=||.|. =.|++|.-+......+-....-++-..
T Consensus 259 niHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs- 337 (471)
T KOG0256|consen 259 NIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSS- 337 (471)
T ss_pred ceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcH-
Confidence 9999999999988765555544332211 122 46789999999884 478888877655543322111111000
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccc
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIP 431 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~ 431 (561)
. +. .-+.-.++=..+-..-+++--+|....-+++.+.|++. |+.++. ...++.||
T Consensus 338 ------~-------tQ--~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~-s~AGlF~w-------- 392 (471)
T KOG0256|consen 338 ------Q-------TQ--YLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLK-SNAGLFCW-------- 392 (471)
T ss_pred ------H-------HH--HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceee-cCCeeEEE--------
Confidence 0 00 00000111122333444555566666677888888887 776663 34455443
Q ss_pred cccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCc
Q psy9807 432 LGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGK 511 (561)
Q Consensus 432 ~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~ 511 (561)
++++.+-.+ .+| +--.++.+++...-+
T Consensus 393 -----------vDlr~lL~s------------------------------------~tf------e~El~Lw~~i~~~vk 419 (471)
T KOG0256|consen 393 -----------VDLRKLLTS------------------------------------LTF------EGELELWERILDNVK 419 (471)
T ss_pred -----------EEhHHhcCc------------------------------------CCh------HHHHHHHHHHHHhhc
Confidence 333333322 111 112367788877755
Q ss_pred EEEEeeeE---CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 512 IHLVPSKI---RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 512 ~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+.++|... ...+++|+|+.+ +.++.++-.++.|+....+
T Consensus 420 lnlSpG~s~~C~EpGWFRvcFAn--~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 420 LNLSPGSSCHCHEPGWFRVCFAN--MSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred cccCCCCcceecCCCeEEEEecc--CCHHHHHHHHHHHHHHHHh
Confidence 66665433 346799999875 3444555466666665543
No 313
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.12 E-value=2.5e-08 Score=106.19 Aligned_cols=165 Identities=15% Similarity=0.027 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---c
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---T 206 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~ 206 (561)
...++.+.+++.+.-.+ ..+|++|||+||..|+.+||.... ..+++..... +
T Consensus 89 ~~~~lae~l~~~~~~~~----------~v~~~~sGseA~e~Alk~ar~~~g---------------r~~ii~~~~~yhG~ 143 (423)
T TIGR00713 89 AEILLAKEIISRVPSVE----------MVRFVNSGTEATMSAVRLARGYTG---------------RDKIIKFEGCYHGH 143 (423)
T ss_pred HHHHHHHHHHHhCCccc----------EEEEeCCHHHHHHHHHHHHHHhhC---------------CCEEEEEcCCCCCC
Confidence 34455566666654322 468999999999999999987521 1234443333 1
Q ss_pred hHHHHHH-hccC-----------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC-
Q psy9807 207 ELEVVML-DWLG-----------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC- 267 (561)
Q Consensus 207 s~~kaa~-~~g~-----------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp- 267 (561)
...-.+. ..+. .+..+| ..|+++|++.+.+ . +..+.+|+......++|.+.|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~i~~--~---~~~~aavi~ep~~~~~G~~~~~ 214 (423)
T TIGR00713 144 HDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLP----YNDLEALEEVFEE--Y---GEEIAGVIVEPVAGNMGVVPPK 214 (423)
T ss_pred hhhhhccccCcccccCCCCCCCCCcccccceEEeC----CCCHHHHHHHHHH--c---CCcEEEEEEeCCCCCCCCcCCC
Confidence 1111110 0110 111222 2388999998864 2 225667777666666888876
Q ss_pred ---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 268 ---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 268 ---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
+++|.++|++||+++++|.+|.+. ...........++ ..|.+ ++.|.++.-+..|.++.++
T Consensus 215 ~~~l~~l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~-~pDi~--t~sK~l~~G~pig~v~~~~ 278 (423)
T TIGR00713 215 PEFLAGLRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGV-EPDLT--TLGKIIGGGLPVGAFGGRR 278 (423)
T ss_pred HHHHHHHHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCC-Ccchh--hhhhhhcCCCceeeeeEHH
Confidence 899999999999999999999765 3322111111223 34644 5799998434467777643
No 314
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.12 E-value=8.1e-08 Score=100.05 Aligned_cols=224 Identities=10% Similarity=-0.067 Sum_probs=126.5
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka 211 (561)
++++.+++.++.+++ ..++|+|++++...++.+. . + ++.+++.... ......
T Consensus 61 ~Lr~aia~~~~v~~~---------~I~it~G~~~~i~~~~~~l----~-~-------------g~~vlv~~P~y~~~~~~ 113 (360)
T PRK07392 61 ELRLALAQHHQLPPE---------WILPGNGAAELLTWAGREL----A-Q-------------LRAVYLITPAFGDYRRA 113 (360)
T ss_pred HHHHHHHHHhCcChh---------hEEECCCHHHHHHHHHHHh----C-C-------------CCeEEEECCCcHHHHHH
Confidence 344455555577664 6788888888765443321 0 0 1245554444 556666
Q ss_pred HHhccCCeEEeeC-CCCcc--ChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhc
Q psy9807 212 MLDWLGKMLDLPK-EFLAC--SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAY 288 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~g~~--d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~ 288 (561)
++..|.+++.+|. .++.. +.+++++.... . ..+.+++.+.-.+.||.+-+-++|.++++++++ +++|.+|
T Consensus 114 ~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y 186 (360)
T PRK07392 114 LRAFGATVKELPLPLDQPSPGLTLRLQTLPPQ--L----TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAF 186 (360)
T ss_pred HHHcCCeEEEEecccccCCcccccCHHHHHHh--c----cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECch
Confidence 7888999999998 44332 23334433322 1 135567777889999999999999999999985 6779998
Q ss_pred ccccccCccccccccCcccc--ceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccC
Q psy9807 289 AGSAFICPENRYLMKGVELA--DSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPL 365 (561)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~a--Dsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (561)
..... ..........+... =.+..++.|.++.| .=+|.++. +...+.........|
T Consensus 187 ~~~~~-~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~-~~~~~~~~~~~~~~~------------------- 245 (360)
T PRK07392 187 MDFLP-PDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA-HPDRLQRWQQWRDPW------------------- 245 (360)
T ss_pred hhhcc-CccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC-CHHHHHHHHhhCCCC-------------------
Confidence 75432 11111111111111 25667999999866 44777666 443333221111000
Q ss_pred cCCcchHHHHHHHHHhhHHHHHH-HHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 366 GRRFRSLKLWFVLRLLGVKYLQE-YIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 366 sr~~~al~lw~~l~~~g~~g~~~-~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
....+..+++...+....+.+ ..+...+..+++.+.|++++++.+.
T Consensus 246 --~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 292 (360)
T PRK07392 246 --PVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPL 292 (360)
T ss_pred --CCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC
Confidence 012233333334443222332 3344556667788888888887764
No 315
>KOG0053|consensus
Probab=99.11 E-value=2.2e-08 Score=101.89 Aligned_cols=217 Identities=14% Similarity=0.079 Sum_probs=138.8
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|....+|.. ++.+-|.+ ..+.+++|..|...++.... +. ++.+|..
T Consensus 75 ~nPt~~~le~~----iaal~ga~-----------~~l~fsSGmaA~~~al~~L~----~~-------------g~~iV~~ 122 (409)
T KOG0053|consen 75 GNPTRDVLESG----IAALEGAA-----------HALLFSSGMAAITVALLHLL----PA-------------GDHIVAT 122 (409)
T ss_pred CCCchHHHHHH----HHHHhCCc-----------eEEEecccHHHHHHHHHHhc----CC-------------CCcEEEe
Confidence 34555666664 47776665 35777888656555554322 11 2244444
Q ss_pred ccc----chH-HHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PAC----TEL-EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~----~s~-~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
..- ..+ .+-....|+....+. .-|++.+++++++ ++.+|-....++.+..+-||++|+++||+
T Consensus 123 ~~~Y~gT~~~l~~~~~~~gie~~~vd----~~~~~~~~~~i~~--------~t~~V~~ESPsNPll~v~DI~~l~~la~~ 190 (409)
T KOG0053|consen 123 GDVYGGTLRILRKFLPKFGGEGDFVD----VDDLKKILKAIKE--------NTKAVFLESPSNPLLKVPDIEKLARLAHK 190 (409)
T ss_pred CCCcccHHHHHHHHHHHhCceeeeec----hhhHHHHHHhhcc--------CceEEEEECCCCCccccccHHHHHHHHhh
Confidence 322 222 233345566666665 3356677777766 67899999999999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccc-cceeeecCCccccccc--cceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVEL-ADSFNFNPHKWMLVTF--DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~-aDsi~~~~HK~l~~P~--g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
+|+.+.||.++++....- .+.. ||.++-|..||+++-. -.|++..+..+..++..... .++ +.
T Consensus 191 ~g~~vvVDnTf~~p~~~~--------pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~-~~l-----g~ 256 (409)
T KOG0053|consen 191 YGFLVVVDNTFGSPYNQD--------PLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ-EDL-----GW 256 (409)
T ss_pred CCCEEEEeCCcCcccccC--------hhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH-HHh-----cC
Confidence 999999999999753222 2333 7999999999999654 35566555443333322111 111 11
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
-..++.+|...|-+-. +.-+++++.+++..+++.|++.|.++-
T Consensus 257 -------------~~~p~~~~ll~Rglkt--l~lRi~~~~ena~~~A~~Le~~~~v~k 299 (409)
T KOG0053|consen 257 -------------CEDPFDLFLLSRGLKT--LHLRINKHSENALKIALLLEAHPKVKK 299 (409)
T ss_pred -------------CCCHHHHHHHhcCcch--hhhhHHHHHHHHHHHHHHhhhCCceeE
Confidence 1244555555554433 444788889999999999999888773
No 316
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.11 E-value=2.9e-08 Score=105.11 Aligned_cols=188 Identities=9% Similarity=-0.083 Sum_probs=115.5
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeE--EeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGV--IQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 197 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~--~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~ 197 (561)
.|.......++=+.+.+|+.+.-+.+-+ ....+ .|.||+.|...++.+.+. ++. + ++
T Consensus 67 ~Y~~~~G~~~lR~aia~~~~~~~~~~~~-------~~~v~~~~t~G~~~al~~~~~~l~~-~~~------~-------Gd 125 (404)
T PTZ00376 67 EYLPIEGLQSFIEAAQKLLFGEASYALA-------EKRIATVQALSGTGALRLGFEFLKR-FLP------A-------GT 125 (404)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCccccc-------cCeEEEeeccCcchHHHHHHHHHHH-hcC------C-------CC
Confidence 3444445566777777887554332101 01334 388988887665544321 111 0 23
Q ss_pred ceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHH
Q psy9807 198 NLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEE 270 (561)
Q Consensus 198 ~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~e 270 (561)
.+++.... ......++..|.+++.+|. +++.+|++.+++++++ .. ....+++.....+.||.+- .+++
T Consensus 126 ~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~--~~---~~~~~~~~~~p~NPTG~~~s~~~~~~ 200 (404)
T PTZ00376 126 TVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRT--AP---NGSVVLLHACAHNPTGVDPTEEQWKE 200 (404)
T ss_pred EEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHh--CC---CCCEEEEeCCCCCCCCCCCCHHHHHH
Confidence 45555544 4556677899999999998 3478999999999865 21 1235666677788888884 6777
Q ss_pred HHHHHhhcCceEEechhcccccccCc--cccccccCc-ccc--ceeeecCCcccccc-ccceeEE--ecChh
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICP--ENRYLMKGV-ELA--DSFNFNPHKWMLVT-FDCSAMW--LKDPS 334 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~--~~~~~~~gi-~~a--Dsi~~~~HK~l~~P-~g~g~l~--~r~~~ 334 (561)
|+++|++||+|+++|.+|.....-.. .... ...+ +.. -.+..++.|.++.| .=.|.++ +.++.
T Consensus 201 l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~ 271 (404)
T PTZ00376 201 IADVMKRKNLIPFFDMAYQGFASGDLDKDAYA-IRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKE 271 (404)
T ss_pred HHHHHHhCCcEEEEehhhcCccCCCHHHHHHH-HHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHH
Confidence 78889999999999999974322110 0100 1111 111 25678899999966 3467764 45554
No 317
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.11 E-value=1.2e-07 Score=101.57 Aligned_cols=310 Identities=12% Similarity=-0.018 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---c
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---T 206 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~ 206 (561)
...++.+.|+++++... ....|++|||+||-.|+..||.... ..+++..... .
T Consensus 97 ~~~~lae~L~~~~p~~~---------~~v~f~~SGsEA~e~AlklAr~~tg---------------r~~ii~~~~~yHG~ 152 (457)
T PRK05639 97 RAIRVAEKLAEISPIEN---------PKVLFGLSGSDAVDMAIKVSKFSTR---------------RPWILAFIGAYHGQ 152 (457)
T ss_pred HHHHHHHHHHhhCCCCc---------CEEEEeCchHHHHHHHHHHHHHhcC---------------CCeEEEECCCcCCc
Confidence 44456667777664321 1468999999999999999986410 1234443332 2
Q ss_pred hHHHHHHhcc-------------CCeEEeeC-CCCc--------cChh--------hHHHHHhhhchhhcCCceEEEEEe
Q psy9807 207 ELEVVMLDWL-------------GKMLDLPK-EFLA--------CSGG--------KGGGVIQRKSDREMCSDLLQVVAT 256 (561)
Q Consensus 207 s~~kaa~~~g-------------~~v~~v~~-~~g~--------~d~~--------~Le~~i~~~~~~~~g~~p~~vv~t 256 (561)
+.. +..+.+ ..+..+|. +..+ -|.+ .|++.|.. ....+....+|++.
T Consensus 153 t~~-a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~--~~~~~~~iAAvI~E 229 (457)
T PRK05639 153 TLG-ATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFS--HVVPPDEVAALFAE 229 (457)
T ss_pred cHH-HHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHH--hhcCCCceEEEEEC
Confidence 211 111111 12444554 2111 1222 23333321 10112356777776
Q ss_pred cCCCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 257 LGTTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 257 ~gtt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
-.....|.+-| +++|.++|++||+.+++|..+.|......-+.....++ ..|.++ ..|.++.-++.|+++.++
T Consensus 230 Piqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~pi~av~~~~ 306 (457)
T PRK05639 230 PIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLII--FGKGVASGMGLSGVIGRK 306 (457)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEE--echhhcCCCcceeEEehH
Confidence 66555566543 88999999999999999999886433222111111244 479888 589998656778887755
Q ss_pred hhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC-CCeE
Q psy9807 333 PSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD-DRFE 411 (561)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~g~~ 411 (561)
. ... .+. ..+.. +-....+..-+++..+..-.-+..+++..++.++|++.|+++ .++.
T Consensus 307 ~-i~~-~~~--~~~~~-----------------T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 365 (457)
T PRK05639 307 E-LMD-LTS--GSALL-----------------TPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFE 365 (457)
T ss_pred H-HHh-hcC--CCccc-----------------CCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3 221 111 11110 111222333333333322222345677777888888888763 2233
Q ss_pred Eecccc-ccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhccee
Q psy9807 412 VIYEVL-MGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 489 (561)
Q Consensus 412 l~~~~~-~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~ 489 (561)
++.+.. .+. +.+.+.+ +
T Consensus 366 ~~~~VrG~Gl~~gve~~~------------------------------------------------------~------- 384 (457)
T PRK05639 366 VIGDVRGKGLMIGVEIVK------------------------------------------------------E------- 384 (457)
T ss_pred CEEeeccceeEEEEEEec------------------------------------------------------C-------
Confidence 322211 111 1111100 0
Q ss_pred eecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 490 FRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 490 f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
...+.......+.+.+.+.|.+. .+.. .+..++|+... ...|++||++++++++++.+++.+
T Consensus 385 -~~~~~~~~~~~~~~~~~~~Gv~~-~~~g-~~~~~lr~~Pp-l~it~~~id~~~~~l~~~l~~~~~ 446 (457)
T PRK05639 385 -NGKPDPELTGKICWRAFELGLIL-PSYG-MFGNVIRITPP-LVITKEIAEKGLEIMERAIKDALA 446 (457)
T ss_pred -CCCCCHHHHHHHHHHHHhCCeEE-eecC-CCCCEEEEeCC-CccCHHHHHHHHHHHHHHHHHHHH
Confidence 00012234567788888888554 3332 22358999855 567889999999999999877643
No 318
>PRK05839 hypothetical protein; Provisional
Probab=99.10 E-value=6.4e-08 Score=101.39 Aligned_cols=177 Identities=10% Similarity=-0.064 Sum_probs=104.6
Q ss_pred hhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc
Q psy9807 126 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC 205 (561)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~ 205 (561)
...++-+.+.+|+++..|.+-+ ....++|+|++++....+.+... .. .++.+++....
T Consensus 61 G~~~lr~aia~~l~~~~g~~~~-------~~~I~it~G~~~al~~~~~~~~~---~~------------~gd~vlv~~P~ 118 (374)
T PRK05839 61 GEESLREAQRGFFKRRFKIELK-------ENELIPTFGTREVLFNFPQFVLF---DK------------QNPTIAYPNPF 118 (374)
T ss_pred CCHHHHHHHHHHHHHHhCCCCC-------cceEEEecCcHHHHHHHHHHHhc---CC------------CCCEEEECCCC
Confidence 3457778889999998885321 12578888888776443332110 00 01234444444
Q ss_pred -chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHHHHhhcCc
Q psy9807 206 -TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQVCRQKDV 280 (561)
Q Consensus 206 -~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~ia~~~~~ 280 (561)
......+...|++++.+|. .++..+++..+..+ + .+.+|+.+.-.+.||.+- .+++|+++|++||+
T Consensus 119 y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~-~--------~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~ 189 (374)
T PRK05839 119 YQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKEL-Q--------EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDF 189 (374)
T ss_pred chhhHHHHHhcCCEEEEeecccccCCcCCcchhhh-c--------cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCC
Confidence 4556667788999999998 44444444333323 2 245666667778888874 56677778899999
Q ss_pred eEEechhcccccccCcccccccc--------CccccceeeecCCccccccc-cceeEEecChhhH
Q psy9807 281 WLHVDAAYAGSAFICPENRYLMK--------GVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWV 336 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~--------gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l 336 (561)
|+++|.+|+-.. ..+....... ..++ =.+..++.|.++.|. =+|.++. ++...
T Consensus 190 ~ii~DE~Y~~~~-~~~~~~s~~~~~~~~~~~~~~~-vi~~~SfSK~~~~~GlRiG~ii~-~~~~~ 251 (374)
T PRK05839 190 ILINDECYSEIY-ENTPPPSLLEASILVGNESFKN-VLVINSISKRSSAPGLRSGFIAG-DASIL 251 (374)
T ss_pred EEEeccchhhcc-cCCCCCCHhhhhcccCccccCc-EEEEeccccccCCccceeEEEec-CHHHH
Confidence 999999998532 1111111111 0011 256789999876664 3555554 44433
No 319
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.10 E-value=3.2e-08 Score=105.00 Aligned_cols=172 Identities=15% Similarity=-0.007 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.+.++.+.|.++++... ....|++|||+||..|+..||.... ..+++.+...
T Consensus 92 ~~~~~~la~~L~~~~~~~~---------~~v~f~~SGsEA~e~AiklAr~~tg---------------r~~ii~~~~~yH 147 (433)
T PRK00615 92 SEQEILFAEELFSYLGLED---------HKIRFVSSGTEATMTAVRLARGITG---------------RSIIIKFLGCYH 147 (433)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCchHHHHHHHHHHHHHhhC---------------CCEEEEEcCccC
Confidence 3455667777788774321 1468999999999999999987521 1123332222
Q ss_pred -ch-H-HHHHHhccC---CeEE-e--eC------CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHH-
Q psy9807 206 -TE-L-EVVMLDWLG---KMLD-L--PK------EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLE- 269 (561)
Q Consensus 206 -~s-~-~kaa~~~g~---~v~~-v--~~------~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~- 269 (561)
.+ . ..+....+. .... . +. .-...|+++|++.+++ . +..+.+|+......+.|.+-|.+
T Consensus 148 G~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~---~~~~aavI~Epv~~~~G~~~p~~~ 222 (433)
T PRK00615 148 GHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNS--L---GHRVAGVIFEPICANMGVVLPKPG 222 (433)
T ss_pred CCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHh--c---CCceEEEEECCCCCCCCcccCCHH
Confidence 11 0 011111110 0000 0 00 0013478899998865 2 23567888888888889888755
Q ss_pred ---HHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 270 ---EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 270 ---eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
+|.++|++||+.+++|.++.|. .....+.....++ ..|.++ ..|.++.-+..|++..++
T Consensus 223 yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~--~gK~lggG~p~~av~~~~ 284 (433)
T PRK00615 223 FIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITV--YGKILGGGLPAAAVVAHK 284 (433)
T ss_pred HHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCC-CCCeEE--EcccccCCcceeeeeecH
Confidence 9999999999999999999654 2222111111233 468766 589987545567777654
No 320
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.09 E-value=1.1e-07 Score=101.67 Aligned_cols=313 Identities=12% Similarity=0.009 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
.+...++.+.+++++..... ...+|++|||+||..|+..||.... .++++.....
T Consensus 98 ~~~~~~la~~l~~~~p~~~~--------~~v~f~~sGseA~e~AlklAr~~tg---------------r~~ii~~~~~yH 154 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHE--------KRSALFNSGAEAVENAVKIARSYTG---------------RQAVVVFDHAYH 154 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCC--------CEEEEeCCcHHHHHHHHHHHHHhhC---------------CCeEEEECCCcC
Confidence 34555677778887643210 1358999999999999999986521 1244444333
Q ss_pred -chHHHHHHhcc-------------CCeEEeeC-CCCc------cCh-hhHHHHHhhhc-hhhcCCceEEEEEecCCCCC
Q psy9807 206 -TELEVVMLDWL-------------GKMLDLPK-EFLA------CSG-GKGGGVIQRKS-DREMCSDLLQVVATLGTTNC 262 (561)
Q Consensus 206 -~s~~kaa~~~g-------------~~v~~v~~-~~g~------~d~-~~Le~~i~~~~-~~~~g~~p~~vv~t~gtt~t 262 (561)
.+.. +..+.+ ..+..+|. ...+ .+. +.+++.++... .. .+..+.+|++.-.....
T Consensus 155 G~t~~-al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAavi~EPi~g~g 232 (443)
T PRK06058 155 GRTNL-TMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQV-GADNLAAVIIEPIQGEG 232 (443)
T ss_pred cChHH-HHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhh-CCCceEEEEECCccCCC
Confidence 2211 111111 12333443 1111 011 22222222100 10 12356677776666666
Q ss_pred ccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHH
Q psy9807 263 CAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVN 338 (561)
Q Consensus 263 G~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~ 338 (561)
|.+-| +++|.++|++||+.+++|..+.|.......+..-..++ ..|.+++ -|.++.=+..|+++.++. .. .
T Consensus 233 G~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~--gK~l~~G~Pi~av~~~~~-i~-~ 307 (443)
T PRK06058 233 GFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITT--AKGIAGGLPLSAVTGRAE-IM-D 307 (443)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEE--cccccCCCccEEEEEcHH-HH-h
Confidence 76655 99999999999999999999876533222111111233 4688888 499886566888887543 22 2
Q ss_pred hhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeccc-
Q psy9807 339 AFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVIYEV- 416 (561)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~~~- 416 (561)
.+... .+ ..+-....+...++++.+..-.-.++.++..++.++|.+.|+++. ...++...
T Consensus 308 ~~~~~-~~-----------------~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr 369 (443)
T PRK06058 308 APHPG-GL-----------------GGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVR 369 (443)
T ss_pred hccCC-CC-----------------CCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeee
Confidence 22110 00 011112334444444444322223466777777888888887641 12222111
Q ss_pred -cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC
Q psy9807 417 -LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP 495 (561)
Q Consensus 417 -~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~ 495 (561)
...++.+.+.+ ++ ...+.
T Consensus 370 g~G~~~~i~~~~------------------------------------------------------~~-------~~~~~ 388 (443)
T PRK06058 370 GRGAMIAIELVK------------------------------------------------------PG-------TTEPD 388 (443)
T ss_pred ccceEEEEEEec------------------------------------------------------CC-------CCCCc
Confidence 11111111110 00 00012
Q ss_pred cHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 496 NEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 496 ~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.+....+.+.+.+.|.+. .+....+ .+||+... ...+++||+++++++++..++
T Consensus 389 ~~~~~~l~~~~~~~Gv~~-~~~~~~~-~~lr~~Pp-l~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 389 AELTKALAAAAHAAGVIV-LTCGTYG-NVIRLLPP-LVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred HHHHHHHHHHHHHCCeEE-eccCCCC-CEEEEECC-CccCHHHHHHHHHHHHHHHHh
Confidence 234567788888888554 3322112 48999744 466889999999999887654
No 321
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.09 E-value=8.1e-08 Score=102.09 Aligned_cols=233 Identities=13% Similarity=0.054 Sum_probs=123.5
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---ch
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TE 207 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s 207 (561)
..++.+.++++++-+- ....|+.+||+||-.|+..||.....+ +.+ ...+++.+... .+
T Consensus 90 ~~~la~~l~~~~~~~~---------~~v~f~~sGseA~e~AlklAr~~~~~~---~~~------~r~~il~~~~~yHG~t 151 (427)
T TIGR00508 90 AIELCQKLVKMTPNAL---------DCVFLADSGSVAVEVALKMALQYWQAK---GEK------NRQKFLTIRSGYHGDT 151 (427)
T ss_pred HHHHHHHHHhhCCCCC---------CEEEEeCCcHHHHHHHHHHHHHHHHhh---CCC------CccEEEEEcCCcCCcc
Confidence 4556667777764221 256899999999999999999764221 000 01245555443 21
Q ss_pred HHHHHHhcc-------------CCeEEeeCC-C------CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCc----
Q psy9807 208 LEVVMLDWL-------------GKMLDLPKE-F------LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC---- 263 (561)
Q Consensus 208 ~~kaa~~~g-------------~~v~~v~~~-~------g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG---- 263 (561)
.. +..+.+ ..+..+|.. . ..-|++++++.+++ . +....+|++.-.....|
T Consensus 152 ~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~--~---~~~vaavivEPv~~g~gG~~~ 225 (427)
T TIGR00508 152 FG-AMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMEL--H---SDEIAAVILEPIVQGAGGMRF 225 (427)
T ss_pred Hh-hhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHh--c---CCcEEEEEEechhcCcCCccc
Confidence 11 111111 112233321 1 12256777888765 2 22455666654423333
Q ss_pred -cccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhc
Q psy9807 264 -AFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFN 341 (561)
Q Consensus 264 -~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~ 341 (561)
..+++++|.++|++||+.+++|.+|.|.......+.....++ ..|.++ ..|.++.-+ .++.++.++. +...+.
T Consensus 226 ~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~--~gK~l~gG~~p~~a~~~~~~--~~~~~~ 300 (427)
T TIGR00508 226 YHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILC--VGKALTGGYMTLSATVTTDK--VAQTIS 300 (427)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEE--echhhhcCcccceEEEEcHH--HHHHHh
Confidence 347999999999999999999999865322221111111233 468776 589886543 4566666443 222232
Q ss_pred cC--CCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 342 VD--PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 342 ~~--~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
.. ..|.... +.. +-++......++++.+..+ ++.++..++.++|++.|+++
T Consensus 301 ~~~~~~~~~~~-----------T~~-g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l 353 (427)
T TIGR00508 301 SGEAGCFMHGP-----------TFM-GNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPL 353 (427)
T ss_pred cCCCCccccCC-----------CCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHh
Confidence 11 1111100 000 1112223334444444332 45678888999999998875
No 322
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.09 E-value=3.2e-07 Score=97.48 Aligned_cols=308 Identities=14% Similarity=0.037 Sum_probs=161.8
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.+.+++.-+.. ...+|++|||+||-.|+..||..-. .++++.....
T Consensus 83 ~~~~~la~~l~~~~p~~~~--------~~v~f~~SGseA~e~AlklAr~~tg---------------r~~ii~~~~~yHG 139 (425)
T PRK07495 83 ENYVRLAERLNALVPGDFA--------KKTIFVTTGAEAVENAVKIARAATG---------------RSAVIAFGGGFHG 139 (425)
T ss_pred HHHHHHHHHHHHhCCCCCC--------CEEEECCchHHHHHHHHHHHHHhhC---------------CCeEEEECCCcCC
Confidence 4455567777777642110 1468999999999999999986511 1234433332
Q ss_pred chHHHHHHhcc-------------CCeEEeeC-C-CCccC----hhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc
Q psy9807 206 TELEVVMLDWL-------------GKMLDLPK-E-FLACS----GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD 266 (561)
Q Consensus 206 ~s~~kaa~~~g-------------~~v~~v~~-~-~g~~d----~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id 266 (561)
.+.. +..+.+ ..+..+|. . ...++ ++++++.+++ .. .+..+.+|++.-...+.|.+-
T Consensus 140 ~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~--~~-~~~~iaavi~EPv~g~~G~~~ 215 (425)
T PRK07495 140 RTFM-GMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKA--DV-DPQRVAAIIIEPVQGEGGFYP 215 (425)
T ss_pred ccHH-HhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHh--cc-CCCceEEEEECCccCCCCCcc
Confidence 2211 111111 13444554 1 11233 3344555532 11 123566777766666666553
Q ss_pred ----CHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc
Q psy9807 267 ----CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV 342 (561)
Q Consensus 267 ----pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~ 342 (561)
-+++|.++|++||+++++|.++.|......-+.....++ ..|.++ ..|.++.-+..|++..++. +...+..
T Consensus 216 ~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv-~pDi~t--lsK~l~~G~pigav~~~~~--i~~~~~~ 290 (425)
T PRK07495 216 APAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEV-AADLTT--MAKGLAGGFPLAAVTGRAE--IMDAPGP 290 (425)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCC-CCCEEe--ehhhhcCCccceEEEEcHH--HHhccCC
Confidence 499999999999999999999886433221111111122 346554 4898876566777777542 2222211
Q ss_pred CCCccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeccc-c
Q psy9807 343 DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVIYEV-L 417 (561)
Q Consensus 343 ~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~~~-~ 417 (561)
.... .+-....+... ++++.+... ++.++..++.++|+++|+++. .+..+... .
T Consensus 291 --~~~~----------------~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG 349 (425)
T PRK07495 291 --GGLG----------------GTYGGNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRG 349 (425)
T ss_pred --CCcC----------------CCCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeec
Confidence 0000 01112233333 444555433 355666667777777776531 11111110 0
Q ss_pred ccce-eeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCc
Q psy9807 418 MGLV-CFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPN 496 (561)
Q Consensus 418 ~~~v-~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~ 496 (561)
.+.. .+.+.+.. . ..+..
T Consensus 350 ~Gl~~~iel~~~~-----------------------------------------------------------~--~~~~~ 368 (425)
T PRK07495 350 PGFMNAVEFNDAD-----------------------------------------------------------S--GLPSA 368 (425)
T ss_pred CceEEEEEEecCC-----------------------------------------------------------C--CCccH
Confidence 1111 11110000 0 00112
Q ss_pred HHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 497 EINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 497 ~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.....+.+.+.+.|.+. .+.... ..++|+... ...++++++++++.|+++.+++
T Consensus 369 ~~~~~~~~~~~~~Gvl~-~~~g~~-~~~~r~~Pp-l~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 369 EFANRVRLKALEKGLIL-LTCGVH-GNVIRFLAP-ITIQDDVFAEALDILEASILEA 422 (425)
T ss_pred HHHHHHHHHHHHCCeEE-eecCCC-CCEEEEeCC-CccCHHHHHHHHHHHHHHHHHH
Confidence 33456788888888654 332222 357999744 5778999999999999988764
No 323
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.09 E-value=1.6e-07 Score=99.77 Aligned_cols=175 Identities=14% Similarity=0.005 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.+.++.+.|++++..+.. ...+|++|||+||-.|+..||..- + .++++.+...
T Consensus 82 ~~~~~~la~~l~~~~p~~~~--------~~~~f~~sGseA~e~AlklAr~~t-------g--------r~~ii~~~~~yH 138 (421)
T PRK09792 82 YESYVTLAEKINALAPVSGQ--------AKTAFFTTGAEAVENAVKIARAHT-------G--------RPGVIAFSGGFH 138 (421)
T ss_pred CHHHHHHHHHHHHhCCCCCC--------ceEEEeCChHHHHHHHHHHHHHhc-------C--------CCeEEEECCCcC
Confidence 34445566667776542211 146899999999999999998641 0 1244544433
Q ss_pred -chHHHHHHhcc-------------CCeEEeeC-CCC-c----cChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc
Q psy9807 206 -TELEVVMLDWL-------------GKMLDLPK-EFL-A----CSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF 265 (561)
Q Consensus 206 -~s~~kaa~~~g-------------~~v~~v~~-~~g-~----~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i 265 (561)
.+.... .+.+ ..+..+|. .+. . -+++.+++.+++ .. ....+.+|++.-....+|.+
T Consensus 139 G~t~~~~-s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~--~~-~~~~iaavi~EPvq~~~G~~ 214 (421)
T PRK09792 139 GRTYMTM-ALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKS--DI-EAKQVAAIIFEPVQGEGGFN 214 (421)
T ss_pred CccHHHH-hhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHh--cc-CCCceEEEEEccccCCCCCc
Confidence 221111 1111 12344444 211 1 234677777753 11 12356777777767777755
Q ss_pred c-C---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 266 D-C---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 266 d-p---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
- | +++|.++|++||+++++|..+.+.......+....-++ ..|. .+..|.++.-+..|.++.++
T Consensus 215 ~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pDi--~t~gK~l~~G~pigav~~~~ 282 (421)
T PRK09792 215 VAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPDL--MTMAKSLAGGMPLSGVVGNA 282 (421)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCcE--EEeehhhcCCCceEEEEEcH
Confidence 3 6 99999999999999999999887533221111000122 4575 45589998656678877744
No 324
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.09 E-value=4.7e-07 Score=97.05 Aligned_cols=182 Identities=10% Similarity=-0.015 Sum_probs=122.2
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 119 FTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 119 ~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
..+.......++=+.+.+++....|.+-+ ....++|+|+++|....+.+ +.. .+.
T Consensus 126 ~~y~~~~G~~~LR~~ia~~l~~~~g~~~~-------~~~IiiT~G~q~al~l~~~~----l~~--------------pGd 180 (459)
T COG1167 126 LQYGPTAGLPELREAIAAYLLARRGISCE-------PEQIVITSGAQQALDLLLRL----LLD--------------PGD 180 (459)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHhcCCccC-------cCeEEEeCCHHHHHHHHHHH----hCC--------------CCC
Confidence 34555566677888888888877777643 12678888888776533322 110 112
Q ss_pred eEEeccc--chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCH---HHHHH
Q psy9807 199 LIASPAC--TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCL---EEIGQ 273 (561)
Q Consensus 199 ~vv~~s~--~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl---~eI~~ 273 (561)
.|+..+- +....+....|.+++.||+++..||+|+|++.+++ . ...++.+.....+.||..-++ ++|.+
T Consensus 181 ~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~--~----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~ 254 (459)
T COG1167 181 TVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQ--W----KPKAVYVTPTFQNPTGVTMSLERRKALLA 254 (459)
T ss_pred EEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhh--c----CCcEEEECCCCCCCCCCccCHHHHHHHHH
Confidence 3333333 55666678899999999998889999999999977 3 123455556777888888666 57889
Q ss_pred HHhhcCceEEechhcccccccCccccccccCcc--ccceeeecCCccccccccceeEEecC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE--LADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~--~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
+|++||+|++=|..|+-...-.+.... +.+.. .-=....++.|.+..-.-+|.+....
T Consensus 255 lA~~~~~~IIEDD~y~el~~~~~p~~~-l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~ 314 (459)
T COG1167 255 LAEKYDVLIIEDDYYGELRYDGPPPPP-LKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPP 314 (459)
T ss_pred HHHHcCCeEEeeCcchhhhcCCCCCCC-hHhhCCCCCEEEEeeehhhcccccceeeeeCCH
Confidence 999999999999998854332221111 11221 12367889999998777788887743
No 325
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.08 E-value=9.1e-08 Score=101.25 Aligned_cols=171 Identities=10% Similarity=-0.102 Sum_probs=101.2
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|...+...++-+.+.+++.+. +.+++ ..++|+|++++... +... +. . ++.++
T Consensus 71 Y~p~~g~~~lr~aia~~~~~~-~~~~d---------~I~it~Ga~~al~~-l~~l----~~----~---------gd~Vl 122 (402)
T TIGR03542 71 YGPEQGYPFLREAIAENDYRG-RIDPE---------EIFISDGAKCDVFR-LQSL----FG----S---------DNTVA 122 (402)
T ss_pred CCCCCCCHHHHHHHHHHHHhc-CCCHH---------HEEECCCcHHHHHH-HHHh----cC----C---------CCEEE
Confidence 433445566777777665332 45443 57888888877643 2211 10 0 12455
Q ss_pred Eeccc-chHHHHHHhccC-----------CeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC
Q psy9807 201 ASPAC-TELEVVMLDWLG-----------KMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC 267 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~-----------~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp 267 (561)
+.... ......++..|. ++..+|. .++.++++. ++ .. .+.+|+++...+.||.+-+
T Consensus 123 v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~--~~--------~~~~i~l~nP~NPTG~~~s 191 (402)
T TIGR03542 123 VQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDL-PE--EP--------KIDIIYLCSPNNPTGTVLT 191 (402)
T ss_pred EeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCc-cc--cC--------CceEEEEeCCCCCCCccCC
Confidence 55455 555666677787 7888887 333343331 11 01 3556777788889999976
Q ss_pred ---HHHHHHHHhhcCceEEechhcccccccCccccccccCccc---cceeeecCCccccccc-cceeEEec
Q psy9807 268 ---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVEL---ADSFNFNPHKWMLVTF-DCSAMWLK 331 (561)
Q Consensus 268 ---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~---aDsi~~~~HK~l~~P~-g~g~l~~r 331 (561)
+++|+++|++||+++++|.+|+-.. ..+.....+..+.. --.+..++.|.++.|. -+|.+...
T Consensus 192 ~~~~~~l~~~a~~~~~~iI~De~y~~~~-~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~ 261 (402)
T TIGR03542 192 KEQLKELVDYANEHGSLILFDAAYSAFI-SDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVP 261 (402)
T ss_pred HHHHHHHHHHHHHcCeEEEEEchhhhhc-cCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEec
Confidence 8889999999999999999998432 11111111111211 1244678999997563 46766663
No 326
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.08 E-value=1.4e-07 Score=100.52 Aligned_cols=171 Identities=14% Similarity=0.072 Sum_probs=98.3
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TEL 208 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~ 208 (561)
..++.+.+.+..+.+.. ..-+|++||++||-.|+..||.... .++++..... -..
T Consensus 86 ~~~la~~l~~~~~~~~~--------~~~~f~~sGsea~e~Alklar~~~~---------------r~~iv~~~~~yHG~~ 142 (425)
T PRK08088 86 YLELCEKMNQKVPGDFA--------KKTLLVTTGSEAVENAVKIARAATK---------------RSGVIAFTGAYHGRT 142 (425)
T ss_pred HHHHHHHHHHhCCCCCC--------CEEEEeCCcHHHHHHHHHHHHHHhC---------------CCeEEEECCccCCcc
Confidence 34667777777654311 2458999999999999999886521 1234444322 111
Q ss_pred HHHHHhccC-------------CeEE--eeCCCCccC----hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC--
Q psy9807 209 EVVMLDWLG-------------KMLD--LPKEFLACS----GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC-- 267 (561)
Q Consensus 209 ~kaa~~~g~-------------~v~~--v~~~~g~~d----~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp-- 267 (561)
.-+..+.+. .+.. +|.....++ ++.|++.++. .. .+..+.+|+..-...+.|.+-|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~--~~-~~~~~aavi~Epi~~~~G~~~~~~ 219 (425)
T PRK08088 143 HYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKN--DA-APEDIAAIIIEPVQGEGGFYAASP 219 (425)
T ss_pred HHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHh--cc-CCCceEEEEECcccCCCCCcCCCH
Confidence 111111111 1122 222111122 4567777753 21 2235667777777777777766
Q ss_pred --HHHHHHHHhhcCceEEechhcccccccCcccccc-ccCccccceeeecCCccccccccceeEEec
Q psy9807 268 --LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL-MKGVELADSFNFNPHKWMLVTFDCSAMWLK 331 (561)
Q Consensus 268 --l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~-~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r 331 (561)
+++|.++|++||+++++|.+|++..... ..... ..++ ..| ..++.|.++.-+..|.+..+
T Consensus 220 ~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g-~~~~~~~~~~-~pd--i~s~sK~l~~G~rig~v~~~ 282 (425)
T PRK08088 220 AFMQRLRALCDEHGIMLIADEVQTGAGRTG-TLFAMEQMGV-AAD--LTTFAKSIAGGFPLAGVTGR 282 (425)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCcCc-chhHHhhcCC-CCC--EEEEeccccCCCcceeeEec
Confidence 9999999999999999999998632221 11100 1122 235 35669999854556777774
No 327
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.08 E-value=1.5e-07 Score=100.80 Aligned_cols=307 Identities=12% Similarity=0.039 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.+.++.+.|+++++.+. ...+|++|||+||-.|+..||.... ..+++.+...
T Consensus 112 ~~~~~~lae~L~~~~p~~~---------~~v~f~~sGseAve~AlklAr~~tg---------------r~~ii~~~~~yH 167 (459)
T PRK06082 112 NETAIECAEKLTEIAGGEL---------NRVLFAPGGTSAIGMALKLARHITG---------------NFKVVSLWDSFH 167 (459)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEECCCcHHHHHHHHHHHHHhcC---------------CCEEEEEeCCCc
Confidence 4555666677777764321 1468999999999999999986510 1234444332
Q ss_pred -chHHHHHHhccC------------CeEEeeC-CCC-----ccC------hhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 206 -TELEVVMLDWLG------------KMLDLPK-EFL-----ACS------GGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 206 -~s~~kaa~~~g~------------~v~~v~~-~~g-----~~d------~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
.+ .-+..+.+. .+..+|. ... ..| ++.|++.|++ . + .+.+|++.-...
T Consensus 168 G~t-~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~---~-~vAavIvEPv~g 240 (459)
T PRK06082 168 GAS-LDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK--E---G-GIGAFIAEAVRN 240 (459)
T ss_pred Ccc-HHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc--C---C-CEEEEEECCccC
Confidence 22 222222221 2344443 111 111 2456666643 1 2 455666655444
Q ss_pred CCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhH
Q psy9807 261 NCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWV 336 (561)
Q Consensus 261 ~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l 336 (561)
..+.+-| +++|.++|++||+.+++|..+.|......-+..-..|+ ..|.++ ..|.++.-+ ..|+++.++. +
T Consensus 241 ~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~--~gKgl~gG~~P~~av~~~~~--i 315 (459)
T PRK06082 241 TDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILC--IGKGLGGGLVPIAAMITKDK--Y 315 (459)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEE--ecccccCCCCcceEEEEcHH--H
Confidence 4333445 99999999999999999999887533322111111244 478887 589998653 5777777653 2
Q ss_pred HHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEE
Q psy9807 337 VNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEV 412 (561)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l 412 (561)
...+. ..+. . .+-....+... ++++.+.. ++.+++..++.++|.+.|+++. ...+
T Consensus 316 ~~~~~--~~~~------------~----~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~ 374 (459)
T PRK06082 316 NTAAQ--ISLG------------H----YTHEKSPLGCAAALATIEVIEQ---EGLLEKVKADSQFMRERLLEMKAKYPL 374 (459)
T ss_pred Hhhcc--CCCC------------C----CCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 12111 0000 0 01112333333 33444433 2467788888889988887641 1211
Q ss_pred eccc-cccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 413 IYEV-LMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 413 ~~~~-~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
+... ..+. +.+.+. .++..
T Consensus 375 i~~vrG~Gl~~~ve~~------------------------------------------------------~~~~~----- 395 (459)
T PRK06082 375 IGDVRGIGLLWGVELV------------------------------------------------------TDRHT----- 395 (459)
T ss_pred eeeeeeccceeEEEEc------------------------------------------------------cCccc-----
Confidence 1111 1111 111110 00000
Q ss_pred ecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
+ .+..+....+...+.+.|.+. .+. +..++|++.. ...+++||++++++++++..++.++
T Consensus 396 ~-~~~~~~~~~~~~~~~~~Gvl~-~~~---~~~~i~~~Pp-l~it~~eid~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 396 K-ERAYDEAEAVLYRCLNNGLSF-KVS---QGNVIQLSPP-LIITREELTQALAILEEAIAKICQD 455 (459)
T ss_pred c-CccHHHHHHHHHHHHhCCCEE-Eec---CCCEEEEeCC-CccCHHHHHHHHHHHHHHHHHHhhh
Confidence 0 011123456777888888654 322 2357998743 4568899999999999998877443
No 328
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.07 E-value=1.1e-07 Score=101.23 Aligned_cols=220 Identities=14% Similarity=0.070 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
++.+.++.+.|.+++.- . ....|++|||+||..|+..||.... ..+++.+... +
T Consensus 92 ~~~~~~la~~l~~~~p~-~---------~~v~f~~sGseA~e~AlklAr~~tg---------------r~~ii~~~~~yH 146 (428)
T PRK12389 92 TELEIEFAKMLKEAIPS-L---------EKVRFVNSGTEAVMTTIRVARAYTG---------------RTKIIKFAGCYH 146 (428)
T ss_pred CHHHHHHHHHHHHhCCC-C---------cEEEEeCCHHHHHHHHHHHHHHhhC---------------CCEEEEECCCcC
Confidence 34556667777776531 1 1468999999999999999987621 1234444333 1
Q ss_pred hHHH-HHHhccC-------------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc
Q psy9807 207 ELEV-VMLDWLG-------------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD 266 (561)
Q Consensus 207 s~~k-aa~~~g~-------------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id 266 (561)
-... +....+. .+..+| ..|++.|++.+++ . +..+.+|++.-.....|.+.
T Consensus 147 G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~l~~--~---~~~vaavi~EPv~g~~G~~~ 217 (428)
T PRK12389 147 GHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP----FNDIEALKEALDK--W---GDEVAAVLVEPIVGNFGIVE 217 (428)
T ss_pred CChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcC----CCCHHHHHHHHHh--c---CCcEEEEEEeCCCCCCCCcC
Confidence 1111 1111111 112222 3378999998865 2 23567888887788889898
Q ss_pred C----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc
Q psy9807 267 C----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV 342 (561)
Q Consensus 267 p----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~ 342 (561)
| +++|.++|++||+.+++|..+.|. -....+.....++ ..|.++ .-|.++.-+..|++..++. +...+..
T Consensus 218 p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~PDivt--~gK~lggG~Pi~av~~~~~--i~~~~~~ 291 (428)
T PRK12389 218 PKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-EPDLTA--LGKIIGGGLPIGAYGGRKD--IMEQVAP 291 (428)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-CCCeee--echhhcCCCceeEEeEHHH--HHhhhcc
Confidence 8 999999999999999999999876 2221111111234 468765 4898876566788876542 2222321
Q ss_pred -CCCccccCCCCCCCCCCcccccCcCCcchHHH---HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy9807 343 -DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKL---WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS 406 (561)
Q Consensus 343 -~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~l---w~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 406 (561)
...+.. .+-....+.. -++++.+..+ ...++..++.++|++.|++
T Consensus 292 ~~~~~~~----------------~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~ 340 (428)
T PRK12389 292 LGPAYQA----------------GTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILE 340 (428)
T ss_pred CCCcccc----------------cCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHH
Confidence 111110 0111223333 3344444333 3667778888888888875
No 329
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.07 E-value=1.2e-07 Score=100.96 Aligned_cols=84 Identities=10% Similarity=0.056 Sum_probs=58.0
Q ss_pred ChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCc
Q psy9807 230 SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV 305 (561)
Q Consensus 230 d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi 305 (561)
+++.|++.+++ .+..+.+|++.-.....|.+-| |++|.++|++||+.+++|..+.|......-+..-..|+
T Consensus 237 ~l~~l~~~l~~-----~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv 311 (464)
T TIGR00699 237 CLEEVEDLIKK-----WHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNL 311 (464)
T ss_pred HHHHHHHHHHh-----cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCC
Confidence 35566776654 1235777888877777888888 99999999999999999999876543222112112245
Q ss_pred c-ccceeeecCCcccc
Q psy9807 306 E-LADSFNFNPHKWML 320 (561)
Q Consensus 306 ~-~aDsi~~~~HK~l~ 320 (561)
. ..|.+++ .|.++
T Consensus 312 ~~~PDi~t~--gK~lg 325 (464)
T TIGR00699 312 DDPPDMVTF--SKKFQ 325 (464)
T ss_pred CCCCCEEEe--hhhhc
Confidence 3 5788666 78874
No 330
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.07 E-value=2.8e-07 Score=97.96 Aligned_cols=173 Identities=13% Similarity=-0.020 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---c
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---T 206 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~ 206 (561)
.+.++.+.|.+++.-+.. ...+|++|||+||-.|+..||.... .++++..... .
T Consensus 77 ~~~~la~~l~~~~p~~~~--------~~v~f~~sGseA~e~AlklAr~~tg---------------r~~ii~~~~~yHG~ 133 (420)
T TIGR00700 77 GYVALAEKLNRIAPGSGP--------KKSVFFNSGAEAVENAVKIARSYTG---------------RPGVVAFDHGFHGR 133 (420)
T ss_pred HHHHHHHHHHHhCCCCCC--------CEEEEeCCcHHHHHHHHHHHHHhcC---------------CCcEEEECCCcCCC
Confidence 344556667776532110 1468999999999999999986521 1234444333 2
Q ss_pred hHHHHHHhcc-------------CCeEEeeC-CCCcc-----------ChhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 207 ELEVVMLDWL-------------GKMLDLPK-EFLAC-----------SGGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 207 s~~kaa~~~g-------------~~v~~v~~-~~g~~-----------d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
+.. +..+.+ ..+..+|. ...+. +++.+++.+.. .. .+..+.+|++.-....
T Consensus 134 t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~iAavi~Epi~g~ 209 (420)
T TIGR00700 134 TNM-TMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVI--DV-GANNVAALVIEPVQGE 209 (420)
T ss_pred cHH-HHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHh--hc-CCCcEEEEEECCccCC
Confidence 211 111111 12333443 11111 24566666532 11 1235777888777777
Q ss_pred CccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 262 CCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 262 tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
+|.+-| +++|.++|++||+++++|..+.+......-+.....++ ..|.++ +.|.++.-+..|.++.++
T Consensus 210 ~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~ 281 (420)
T TIGR00700 210 GGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRA 281 (420)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CCCEEE--eeccccCCcceEEEEecH
Confidence 787766 99999999999999999999886533221110001122 357655 689998556678877754
No 331
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.07 E-value=4.1e-07 Score=97.33 Aligned_cols=318 Identities=10% Similarity=0.042 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.++++++-+- ....|++|||+||-.|+..||.....+ .. + ...+++.....
T Consensus 97 ~~~~~lAe~L~~~~p~~~---------~~v~f~~sGseAve~AlKlA~~~~~~r-g~--~------~r~~Ii~~~~~yHG 158 (453)
T PRK06943 97 EPAIELAERLAALTGGTL---------GHAFFASDGASAVEIALKMSFHAWRNR-GR--G------DKREFVCLANGYHG 158 (453)
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEeCCCHHHHHHHHHHHHHHHHHh-CC--C------CCCEEEEECCCcCC
Confidence 344556677777764321 146899999999999999998764222 00 0 01234444333
Q ss_pred chHHHHHHhcc------------CCeEEeeC-CCC------------ccChhhHHHHHhhhchhhcCCceEEEEEecC-C
Q psy9807 206 TELEVVMLDWL------------GKMLDLPK-EFL------------ACSGGKGGGVIQRKSDREMCSDLLQVVATLG-T 259 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~-~~g------------~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g-t 259 (561)
.+.. +..+.+ ..+..+|. ... .-+++.|++.+++ . +..+.+|++.-. .
T Consensus 159 ~t~g-als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~---~~~iAAviiEPvvq 232 (453)
T PRK06943 159 ETIG-ALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE--R---AGKIAALIVEPLVQ 232 (453)
T ss_pred CcHH-hhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh--C---CCceEEEEEecccc
Confidence 2211 111111 12334443 111 1134667777754 1 235666666542 4
Q ss_pred CCCccc----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChh
Q psy9807 260 TNCCAF----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPS 334 (561)
Q Consensus 260 t~tG~i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~ 334 (561)
...|.+ +=++++.++|++||+.+++|..+.|......-+.....++ ..|.+++ -|.++.=+ +.|+++.++.
T Consensus 233 g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~PDivt~--gKgl~gG~~Pi~av~~~~e- 308 (453)
T PRK06943 233 CAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-WPDFLCL--SKGISGGYLPLSLVLSRDA- 308 (453)
T ss_pred ccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-CCCeEee--ehhhccCcccceEEEEcHH-
Confidence 444544 4689999999999999999999876543332111111244 4798888 78887653 5777887653
Q ss_pred hHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 335 WVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
+...+..... .+ .+....+-....+..-++++.+..-.-+..+++..++.++|.+.|+++.....+.
T Consensus 309 -i~~~~~~~~~------~~------~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~ 375 (453)
T PRK06943 309 -IFAAFYDDDV------TR------GFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVR 375 (453)
T ss_pred -HHHhhcccCc------cC------CccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 2222321100 00 0000112122344444444443322223456777778888888887641111111
Q ss_pred cccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecC-
Q psy9807 415 EVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLK- 493 (561)
Q Consensus 415 ~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~- 493 (561)
. +++..+-.+ +-|...
T Consensus 376 ~---------vrG~Gl~~g------------------------------------------------------vel~~~~ 392 (453)
T PRK06943 376 H---------LRQRGTIFA------------------------------------------------------FDVALDG 392 (453)
T ss_pred e---------EeccccEEE------------------------------------------------------EEEccCC
Confidence 1 111110000 111100
Q ss_pred -CCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 494 -GPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 494 -~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
........+.+.+.++|.+. .+. | ..+|++.. ...|++||+++++++++..+++..+
T Consensus 393 ~~~~~~~~~i~~~~~~~Gll~-~~~---g-~~l~~~Pp-l~it~~eid~~~~~l~~al~~~~~~ 450 (453)
T PRK06943 393 DAARTFSRRFFEAALERELLL-RPI---G-TTVYLMPP-YVLDDDEIAWLAERTRATLDATLAE 450 (453)
T ss_pred CcchHHHHHHHHHHHHCCcEE-Eec---C-CEEEEeCC-CcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 11223457788888988654 322 2 26898744 4668899999999999998887543
No 332
>PRK07036 hypothetical protein; Provisional
Probab=99.06 E-value=5.1e-07 Score=96.93 Aligned_cols=323 Identities=11% Similarity=0.016 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.+.++.+.|.+++.-+- ....|++|||+||..|+..||.....+ +. ....+++.+...
T Consensus 94 ~~~~~~lae~L~~~~p~~~---------~~v~f~~sGseAve~AlklAr~~~~~~----g~-----t~r~~Ii~~~~~YH 155 (466)
T PRK07036 94 NAPAAELAAKLAELAPGDL---------NHVFLTTGGSTAVDSALRFVHYYFNVR----GR-----PAKKHIITRGDAYH 155 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCCchHHHHHHHHHHHHHHHhc----CC-----CCccEEEEEcCccC
Confidence 3455666777777653211 246899999999999999998653211 00 001234443332
Q ss_pred -chHHHHHHhcc------------CCeEEeeC-CC----CccC--------hhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 206 -TELEVVMLDWL------------GKMLDLPK-EF----LACS--------GGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 206 -~s~~kaa~~~g------------~~v~~v~~-~~----g~~d--------~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
.++. +..+.+ ..+..+|. .. ..+. ++.+++.|.. ..+..+.+|++.-..
T Consensus 156 G~t~~-a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~----~~~~~iAavi~EPv~ 230 (466)
T PRK07036 156 GSTYL-TASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS----LGADNIAAFIAEPIL 230 (466)
T ss_pred CccHh-hhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH----cCCCceEEEEEeCCc
Confidence 2211 111111 12334443 11 1111 2344454432 122367788888777
Q ss_pred CCCccccC----HHHHHHHHhhcCceEEechhcccccccCcccccc-ccCccccceeeecCCccccccc-cceeEEecCh
Q psy9807 260 TNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL-MKGVELADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 260 t~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~-~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
...|.+-| +++|.++|++||+.+++|..+.|......-+..- ..++ ..|.+++ .|.++.=+ .+|++..++.
T Consensus 231 g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~--gK~l~gG~~Pi~av~~~~~ 307 (466)
T PRK07036 231 GSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITF--AKGLTSGYQPLGAVIISER 307 (466)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEE--ccccccCccccEEEEEcHH
Confidence 77788877 9999999999999999999987653332111100 1133 3688766 79887643 5777777653
Q ss_pred hhHHHhhccC---C-CccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy9807 334 SWVVNAFNVD---P-LYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR 409 (561)
Q Consensus 334 ~~l~~~~~~~---~-~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g 409 (561)
+...+... . .|... .+-....+...+++..+..-.-.++.++..++.++|.+.|+++..
T Consensus 308 --i~~~~~~~~~~~~~~~~~---------------~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~ 370 (466)
T PRK07036 308 --LLDVISGPNAKGNVFTHG---------------FTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRE 370 (466)
T ss_pred --HHHHHhcccCcCcccccC---------------CCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcc
Confidence 22223211 0 11110 111123344444444333222235677888888888888875422
Q ss_pred eEEeccc-cccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcc
Q psy9807 410 FEVIYEV-LMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 487 (561)
Q Consensus 410 ~~l~~~~-~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~ 487 (561)
..++... ..+. +.+.+.. ++...
T Consensus 371 ~~~v~~vrG~Gl~~~ve~~~------------------------------------------------------~~~~~- 395 (466)
T PRK07036 371 LPLVGDVRGDHLMACVECVA------------------------------------------------------DKGSK- 395 (466)
T ss_pred CCCEEEEEeeceEEEEEEcc------------------------------------------------------Ccccc-
Confidence 2221111 1111 1111100 00000
Q ss_pred eeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 488 VCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 488 v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
-.+ .........+...+.+.|.+. .+. + ..+|++.. ...|++||+++++++.++.+++.++
T Consensus 396 ~~~--~~~~~~~~~~~~~~~~~Gvl~-~~~---~-~~~~l~Pp-l~it~~~id~~~~~l~~al~~~~~~ 456 (466)
T PRK07036 396 ALL--PEDIAIGQRIDRHCQERGLLV-RPL---E-HLCVLSPP-LIITRAQIDEIVAILRAAIEETADE 456 (466)
T ss_pred CCC--CchhHHHHHHHHHHHHCCcEE-eec---C-CEEEEeCC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000 001123456778888888654 222 2 36787633 4568899999999999988877554
No 333
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.06 E-value=2.4e-07 Score=98.45 Aligned_cols=308 Identities=12% Similarity=0.046 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+.+.++.+.|++++.-+- ....|++|||+||-.|+..||.....+ +.+ ...+++.....
T Consensus 87 ~~~~~lae~L~~~~p~~~---------~~v~f~~sGseAve~AlklAr~~~~~~---g~~------~r~~ii~~~~~yHG 148 (429)
T PRK06173 87 EPAVELAQKLLEILPPSL---------NKIFFADSGSVAVEVAMKMALQYQQAK---GEV------QRTKFATIRSGYHG 148 (429)
T ss_pred HHHHHHHHHHHhhCCCCc---------CEEEEeCCchHHHHHHHHHHHHHHHHh---CCC------CCcEEEEECCCcCC
Confidence 344566667777653111 246899999999999999999753221 000 01234443332
Q ss_pred chHHHHHHhcc-------------CCeEEeeCCCC-------ccChhhHHHHHhhhchhhcCCceEEEEEecC-CCCCcc
Q psy9807 206 TELEVVMLDWL-------------GKMLDLPKEFL-------ACSGGKGGGVIQRKSDREMCSDLLQVVATLG-TTNCCA 264 (561)
Q Consensus 206 ~s~~kaa~~~g-------------~~v~~v~~~~g-------~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g-tt~tG~ 264 (561)
.++.. ..+.+ ..+..+|..+. ..+++.|++.|++ . +..+.+|++.-. ....|.
T Consensus 149 ~t~~a-~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~--~---~~~iAAvi~EPi~qg~gG~ 222 (429)
T PRK06173 149 DTWHA-MSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ--K---GDEIAALILEPVVQGAGGM 222 (429)
T ss_pred cchhh-hccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh--C---CCcEEEEEEcchhhccCCc
Confidence 22211 11111 12333443111 1246667777754 1 235666666543 344444
Q ss_pred c----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHh
Q psy9807 265 F----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNA 339 (561)
Q Consensus 265 i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~ 339 (561)
+ +=++++.++|++||+++++|.+|.|..-...-+.....++ ..|.++ ..|.++.-+ .++.++.++. .. ..
T Consensus 223 ~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~~p~~a~~~~~~-i~-~~ 297 (429)
T PRK06173 223 YFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV-VPDIMC--IGKALTGGYLTLSATITTEA-IA-QT 297 (429)
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-CCCEEE--eehhhhCCccccceEEecHH-HH-HH
Confidence 4 4688999999999999999999865322221111111233 368777 689886553 5677776553 22 22
Q ss_pred hccC--CCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc-
Q psy9807 340 FNVD--PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV- 416 (561)
Q Consensus 340 ~~~~--~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~- 416 (561)
+... ..+.... +.. .-+..+....++++.+-.+ ...++..++.++|.+.|++..++..+.+.
T Consensus 298 ~~~~~~~~~~~~~-----------T~~-g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vR 362 (429)
T PRK06173 298 ICSGEAKCFMHGP-----------TFM-ANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVR 362 (429)
T ss_pred HhcCCCCccccCC-----------CCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeee
Confidence 2111 0111100 000 1112233334455555443 34677788888999988754333222211
Q ss_pred -cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC
Q psy9807 417 -LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP 495 (561)
Q Consensus 417 -~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~ 495 (561)
...++.+ -+ ..
T Consensus 363 g~Gl~~~i-----------------------------------------------------------------el--~~- 374 (429)
T PRK06173 363 VLGAIGVV-----------------------------------------------------------------EM--KE- 374 (429)
T ss_pred ccceEEEE-----------------------------------------------------------------Ee--CC-
Confidence 1111111 11 11
Q ss_pred cHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 496 NEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 496 ~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
......+.+.|.+.|.+ +.+. | .+||+.. ....+++|+++++++|+++..++.
T Consensus 375 ~~~~~~i~~~l~e~Gi~-v~~~---g-~~l~~~P-pl~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 375 PVNMATLQPRFVEHGIW-VRPF---G-KLVYIMP-PFIISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred cccHHHHHHHHHHCCeE-EEec---C-CEEEEeC-CccCCHHHHHHHHHHHHHHHHHHh
Confidence 11134678889888854 3332 3 3899974 457789999999999999887654
No 334
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.05 E-value=2e-07 Score=98.83 Aligned_cols=235 Identities=12% Similarity=0.016 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.|+++++-+- ....|++|||+||..|+..||.....+ +. ...+++.....
T Consensus 86 ~~~~~la~~L~~~~p~~~---------~~v~f~~SGsEAve~AlklAr~~~~~~----g~------~r~kii~~~~~yHG 146 (428)
T PRK07986 86 PPAIELCRKLVAMTPQPL---------ECVFLADSGSVAVEVAMKMALQYWQAK----GE------PRQRFLTLRHGYHG 146 (428)
T ss_pred HHHHHHHHHHHhhCCCCc---------CEEEEeCCcHHHHHHHHHHHHHHHHhc----CC------CCcEEEEECCCcCC
Confidence 445566777777764221 146899999999999999998753111 00 01244444333
Q ss_pred chHHHHHHhcc-------------CCeEEeeC-CC------CccChhhHHHHHhhhchhhcCCceEEEEEecC-CCCCcc
Q psy9807 206 TELEVVMLDWL-------------GKMLDLPK-EF------LACSGGKGGGVIQRKSDREMCSDLLQVVATLG-TTNCCA 264 (561)
Q Consensus 206 ~s~~kaa~~~g-------------~~v~~v~~-~~------g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g-tt~tG~ 264 (561)
.++. +..+.+ ..+..+|. .. ...|+++|++.|++ . +....+|+..-. ....|.
T Consensus 147 ~t~~-a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~--~---~~~iaavi~Epi~~g~gg~ 220 (428)
T PRK07986 147 DTFG-AMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA--H---RHEIAAVILEPIVQGAGGM 220 (428)
T ss_pred CcHh-hhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh--C---CCcEEEEEEechhcCcCCc
Confidence 1111 111111 12334443 11 13467788888864 2 224455666543 333343
Q ss_pred c----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHh
Q psy9807 265 F----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNA 339 (561)
Q Consensus 265 i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~ 339 (561)
+ +.|++|.++|++||+++++|.++.|......-+.....++ ..|.++ ..|.++.- ..+|+++.++. +...
T Consensus 221 ~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t--~gK~l~gG~~p~~av~~~~~--i~~~ 295 (428)
T PRK07986 221 RIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILC--LGKALTGGTMTLSATLTTRE--VAET 295 (428)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEE--echhhhCCcccCcchhchHH--HHHH
Confidence 2 4499999999999999999999866422221111111234 368776 58988654 25566565442 2222
Q ss_pred hccCC-CccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 340 FNVDP-LYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 340 ~~~~~-~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
+.... ..+... .+.. +-+..+....++++.+-.+ ++.++..++.++|.+.|+++
T Consensus 296 ~~~~~~~~~~~~----------~T~~-g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l 350 (428)
T PRK07986 296 ISNGEAGCFMHG----------PTFM-GNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPL 350 (428)
T ss_pred hhcCCCCccccC----------CCCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHH
Confidence 32110 000000 0000 1112233334455555443 45778888888898888864
No 335
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.04 E-value=1.2e-07 Score=101.18 Aligned_cols=224 Identities=14% Similarity=0.063 Sum_probs=122.4
Q ss_pred ceEEEEEecCCCCCccc----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc
Q psy9807 249 DLLQVVATLGTTNCCAF----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD 324 (561)
Q Consensus 249 ~p~~vv~t~gtt~tG~i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g 324 (561)
.+.+|++.-.....|.+ +-+++|.++|++||+++++|..+.|......-+.....++ ..|.++ ..|.++.-+.
T Consensus 206 ~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~--~gK~l~~G~P 282 (442)
T TIGR00709 206 KPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVV--MSKAVGGGLP 282 (442)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEE--EcccccCCcc
Confidence 45666666555555554 3689999999999999999999887544332111111233 468888 5898886667
Q ss_pred ceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHH---HHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy9807 325 CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKL---WFVLRLLGVKYLQEYIRKQISLAKEFE 401 (561)
Q Consensus 325 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~l---w~~l~~~g~~g~~~~~~~~~~la~~l~ 401 (561)
.|+++.++. . ..+. ... . + .+-....+.. -++++.+..+ .+.++..++.++|.
T Consensus 283 igav~~~~~--~-~~~~--~~~--~---~-----------~T~~gnpla~aaa~a~L~~i~~~---~l~~~~~~~g~~l~ 338 (442)
T TIGR00709 283 LAVLLIAPE--F-DAWQ--PAG--H---T-----------GTFRGNQLAMVTGTEALNYWKDD---NLAQNAQERGERIT 338 (442)
T ss_pred cEEEEEchH--H-hccC--CCc--C---C-----------CCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHH
Confidence 888888654 2 2221 100 0 0 0111223333 3344444333 45567777788888
Q ss_pred HHHhcC-CCeEEeccc-ccc-ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhh
Q psy9807 402 QLVRSD-DRFEVIYEV-LMG-LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 478 (561)
Q Consensus 402 ~~l~~~-~g~~l~~~~-~~~-~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~ 478 (561)
+.|+++ ..+.++.+. ..+ ++.+.+.+.. ..+.
T Consensus 339 ~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~--~~~~------------------------------------------- 373 (442)
T TIGR00709 339 SFLDDMIKEHPCIGNVRGRGLMQGIMIVDER--QSKD------------------------------------------- 373 (442)
T ss_pred HHHHHHHHhCCCeeeeeccceEEEEEEccCc--cccc-------------------------------------------
Confidence 887753 122222221 111 1111111000 0000
Q ss_pred hhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 479 VIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 479 ~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
..............+...+.+.|.+. .+... +..++|+... ...|++||++++++++++.+++.++
T Consensus 374 ---------~~~~~~~~~~~~~~~~~~~~~~Gvl~-~~~~~-~~~~l~~~Pp-l~it~~ei~~~~~~l~~~l~~~~~~ 439 (442)
T TIGR00709 374 ---------ATGAYPRDCELAAAIQGACFENGLLL-ETGGR-EGEVFRLLCP-ITIDQEECEEGISRFKQAVEEALAE 439 (442)
T ss_pred ---------ccccCCcchHHHHHHHHHHHHCCeEE-eecCC-CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011123456778888888543 33322 2358998754 5778899999999999998887655
No 336
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.04 E-value=9.6e-08 Score=102.76 Aligned_cols=198 Identities=10% Similarity=-0.001 Sum_probs=118.3
Q ss_pred HHHHHHHHhhccccccccccC-hhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHH-HHHHH
Q psy9807 104 AIVADILSDSIACIGFTWIAS-PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAK-AKTMQ 181 (561)
Q Consensus 104 ~~~~~~l~~~~n~~~~~~~~s-p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar-~~~~~ 181 (561)
.++.++..+..+. .|... ......|..+.+++.+.++..... .+....++|+|||+|...++.+.. +..+.
T Consensus 110 ~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~----~~~~~V~it~Gat~al~~~~~~l~~~~ll~ 182 (521)
T TIGR03801 110 AFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPP----PGEFDLFAVEGGTAAMCYIFDSLKANELLK 182 (521)
T ss_pred HHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCC----CCcCeEEEeCCHHHHHHHHHHHHhHhhcCC
Confidence 4455555554443 24222 223456666667877765432110 000157899999999877665422 11111
Q ss_pred HHHhcCCCCCCcccccceEEeccc-chHHHHHHhc--cCCeEEeeC-C--C-----CccChhhHHHHHhhhchhhcCCce
Q psy9807 182 RVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDW--LGKMLDLPK-E--F-----LACSGGKGGGVIQRKSDREMCSDL 250 (561)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~--g~~v~~v~~-~--~-----g~~d~~~Le~~i~~~~~~~~g~~p 250 (561)
| ++++++.... ......+.+. +.+++.+++ . . +.+|+++|++++.+ ++
T Consensus 183 ------p-------GD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~--------~~ 241 (521)
T TIGR03801 183 ------K-------GDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDP--------SI 241 (521)
T ss_pred ------C-------CCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCC--------CC
Confidence 1 2355555555 3444555554 566777776 2 2 67899999987655 56
Q ss_pred EEEEEecCCCCCccccC---HHHHHHHHhhc--CceEEechhcccccccCccccccccCccccceeeecCCccccccc-c
Q psy9807 251 LQVVATLGTTNCCAFDC---LEEIGQVCRQK--DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-D 324 (561)
Q Consensus 251 ~~vv~t~gtt~tG~idp---l~eI~~ia~~~--~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g 324 (561)
.+|+++.-++.||.+-+ +++|+++|++| ++|+++|.+|+-.. .+..........--.+..++.|.++.|. =
T Consensus 242 kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~---~~~~sl~~~~~~~vI~v~SfSK~fg~~G~R 318 (521)
T TIGR03801 242 KALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFV---DDFRSLFAELPYNTIGVYSFSKYFGATGWR 318 (521)
T ss_pred cEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhc---ccccchhhhCCCCEEEEEcchhhccCchhh
Confidence 67777778899999876 77788889987 99999999998432 1222221111111356779999987663 3
Q ss_pred ceeEEecC
Q psy9807 325 CSAMWLKD 332 (561)
Q Consensus 325 ~g~l~~r~ 332 (561)
.|.+...+
T Consensus 319 lG~i~~~~ 326 (521)
T TIGR03801 319 LGTIALHK 326 (521)
T ss_pred hhhhhcCc
Confidence 66666544
No 337
>PRK07480 putative aminotransferase; Validated
Probab=99.04 E-value=5.2e-07 Score=96.60 Aligned_cols=179 Identities=12% Similarity=0.028 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
..+.++.+.|+++++-+- ....|++|||+||..|+..||...... +.+ ...+++.+...
T Consensus 94 ~~~~~lae~L~~~~p~~~---------~~v~f~~SGseA~e~AlklAr~~~~~~---g~~------~r~~ii~~~~~yHG 155 (456)
T PRK07480 94 PPAIELAAKLAEVAPPGF---------NHVFFTNSGSEANDTVLRMVRHYWALK---GKP------QKKVIISRKNGYHG 155 (456)
T ss_pred HHHHHHHHHHHHhCCCCc---------CEEEEeCCcHHHHHHHHHHHHHHHHhc---CCC------CCcEEEEECCCcCC
Confidence 445556667777763211 246899999999999999998753211 000 01133333322
Q ss_pred chHHHHHHhcc------------CCeEEeeC-CCC----ccC--------hhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 206 TELEVVMLDWL------------GKMLDLPK-EFL----ACS--------GGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~-~~g----~~d--------~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
.++. +..+.+ ..+..+|. ... ..+ ++.|++.+.+ . .+..+.+|++.-...
T Consensus 156 ~tl~-a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~--~~~~vAAvi~EPiqg 230 (456)
T PRK07480 156 STVA-GASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILE--L--GADNVAAFIGEPIQG 230 (456)
T ss_pred cchh-hhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHh--c--CCCcEEEEEEccccC
Confidence 2211 111111 11223332 100 011 2555555532 1 123566777776666
Q ss_pred CCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecCh
Q psy9807 261 NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 261 ~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
..|.+-| +++|.++|++||+.+++|..+.|......-+..-..++ ..|.+++ .|.++.=+ ..|+++.++.
T Consensus 231 ~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~ 305 (456)
T PRK07480 231 AGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTI--AKGLTSGYIPMGAVGVGDR 305 (456)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeee--ehhhccCCccceEEEEcHH
Confidence 6787776 99999999999999999999876533332111112244 4687765 89887532 4677777543
No 338
>KOG2467|consensus
Probab=99.03 E-value=8.7e-08 Score=94.42 Aligned_cols=275 Identities=13% Similarity=0.044 Sum_probs=164.1
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCe--EEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGG--VIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g--~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
|....-..++|.-+.+.-.+.||++++. || +-.-|||-||+..-.+..... .++. +-++..+|..
T Consensus 78 YGGne~ID~iE~LCq~RALeaF~ldp~k--------WGVNVQp~SGSPANfavYtall~Ph-~RiM--GLDLP~GGHL-- 144 (477)
T KOG2467|consen 78 YGGNEYIDQIELLCQKRALEAFGLDPEK--------WGVNVQPYSGSPANFAVYTALLKPH-ERIM--GLDLPSGGHL-- 144 (477)
T ss_pred cCcchHHHHHHHHHHHHHHHHhCCCHHH--------CceeeccCCCCchhhHHHhhhcCCC-Ceee--eccCCCCCcc--
Confidence 3344456789998988889999999873 44 345678899976544422110 0000 0001111100
Q ss_pred eEEecccchHHHH--HH-hccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 199 LIASPACTELEVV--ML-DWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 199 ~vv~~s~~s~~ka--a~-~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
-.-|.+. -.|. .. ...--...|....|-+|.|.||+.-.. .+|.++++ |++...-.-|...+.+||
T Consensus 145 sHGy~T~--~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~-------frPk~iia--G~SaY~R~~DYaR~R~Ia 213 (477)
T KOG2467|consen 145 SHGYQTP--TKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATL-------FRPKLIIA--GTSAYSRLIDYARFRKIA 213 (477)
T ss_pred ccccccC--CceeeeeeeecccCceeeCCCCCceehHHHHHHHHh-------cCCcEEEe--ccccchhhccHHHHHHHH
Confidence 0001100 0000 00 001112334447899999999987654 37877765 666666667899999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
.+.|++|.+|-||-.+.+...... .-+|.||.++...||.|.+|.|.-++|-|-.......-.....|-..+ .
T Consensus 214 d~~gA~Lm~DMAHISgLVAA~vip---sPFey~DiVTTTTHKsLRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~----k 286 (477)
T KOG2467|consen 214 DKVGAYLMADMAHISGLVAAGVIP---SPFEYCDIVTTTTHKSLRGPRGAMIFYRKGVKSIKPKQGKEILYDLED----K 286 (477)
T ss_pred HhcCceeehhhhhHHHHHhcccCC---CcccccceeeccccccccCCcceeEEEeccCCcCCCCCCCcceechhh----h
Confidence 999999999999875544322111 135778999999999999999765555443221110001111221100 0
Q ss_pred CCC-CcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-ccccceeeeccc
Q psy9807 356 PDY-RHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCFRLKH 427 (561)
Q Consensus 356 ~~~-~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~~~v~f~~~~ 427 (561)
.++ .--++|++..- .+.++..+|+.-....+.+..++..++++.|.+.|.+. |++++.. .+.-+|..++++
T Consensus 287 INfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~ 360 (477)
T KOG2467|consen 287 INFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRP 360 (477)
T ss_pred hhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccc
Confidence 111 11134444432 34556678888888889999999999999999999998 9999864 444555555554
No 339
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.03 E-value=3.1e-07 Score=94.50 Aligned_cols=206 Identities=9% Similarity=-0.009 Sum_probs=115.3
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka 211 (561)
.+++.+++.+|.+ ..++|+|++++....+.+ . + ++++++.... ......
T Consensus 53 ~Lr~~ia~~~~~~-----------~I~it~Gs~~al~~~~~~------~------~-------gd~v~v~~P~y~~~~~~ 102 (330)
T PRK05664 53 GLEAAARAYYGAP-----------QLLPVAGSQAAIQALPRL------R------A-------PGRVGVLSPCYAEHAHA 102 (330)
T ss_pred HHHHHHHHHhCCC-----------CEEECcCHHHHHHHHHHc------c------C-------CCEEEEcCCChHHHHHH
Confidence 4455667777642 468888888876443211 0 0 2345554444 455666
Q ss_pred HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEechhc
Q psy9807 212 MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVDAAY 288 (561)
Q Consensus 212 a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA~ 288 (561)
++..|.+++.+|. +.+++.+.+ +.+++.+..++.||.+-+ +++|+++|+++|+++++|.+|
T Consensus 103 ~~~~g~~~~~v~~-------~~~~~~~~~---------~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y 166 (330)
T PRK05664 103 WRRAGHQVRELDE-------AEVEAALDS---------LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAF 166 (330)
T ss_pred HHHcCCeEEEech-------hhHhhhhcC---------CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCc
Confidence 7888999998883 345555533 224555566788999876 555566678999999999998
Q ss_pred ccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcC
Q psy9807 289 AGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGR 367 (561)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr 367 (561)
.... ..+..... ..-++ -.+..++.|.++.|. =+|.+.. +...+.........|.
T Consensus 167 ~~~~-~~~s~~~~-~~~~~-vi~~~SfSK~~gl~GlRiG~~v~-~~~l~~~~~~~~~~~~-------------------- 222 (330)
T PRK05664 167 MDNT-PQHSLAAC-AHRPG-LIVLRSFGKFFGLAGARLGFVLA-EPALLRALAELLGPWT-------------------- 222 (330)
T ss_pred ccCC-Cccccccc-ccCCC-EEEEeeccccccCCCcceEEEEe-CHHHHHHHHHhcCCCC--------------------
Confidence 6332 11111111 11100 167889999998664 3566555 5444433222111110
Q ss_pred CcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 368 RFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 368 ~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
...+..+++...+. ....++..+...+..+++.+.|++. ++
T Consensus 223 -~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~ 264 (330)
T PRK05664 223 -VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GL 264 (330)
T ss_pred -CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 01122222233332 1223455566666778888888876 54
No 340
>PRK06149 hypothetical protein; Provisional
Probab=99.02 E-value=2e-07 Score=108.71 Aligned_cols=312 Identities=12% Similarity=0.051 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---c
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---T 206 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~ 206 (561)
...++.+.|++++.-+- ...+|++|||+||..|+..||.... ..+++..... .
T Consensus 625 ~~~elae~L~~~~p~~~---------~~v~f~~SGsEA~e~AlklAr~~tg---------------r~~ii~~~~~yHG~ 680 (972)
T PRK06149 625 AVAEFSERLAALAPDGL---------DTVFLVNSGSEANDLAIRLAWAASG---------------RRDVVSVLEAYHGW 680 (972)
T ss_pred HHHHHHHHHHHhCCCCc---------CEEEEeCCchHHHHHHHHHHHHhcC---------------CCeEEEEeCCCCCc
Confidence 44455556677662111 2468999999999999999986521 1234443322 2
Q ss_pred hHHHH-H--Hh-------cc--CCeEEeeC-CCC-----ccC-----hhhHHHHHhhhchhhcCCceEEEEEecCCCCCc
Q psy9807 207 ELEVV-M--LD-------WL--GKMLDLPK-EFL-----ACS-----GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC 263 (561)
Q Consensus 207 s~~ka-a--~~-------~g--~~v~~v~~-~~g-----~~d-----~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG 263 (561)
+.... . .. .. ..+..++. +.. ..+ .+++++.++. ....+..+.+|++.-...+.|
T Consensus 681 t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~iAavI~Epv~g~gG 758 (972)
T PRK06149 681 TVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEE--LDASGRGLAGFICEPVYGNAG 758 (972)
T ss_pred ChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHH--HhhcCCceEEEEEcccccCCC
Confidence 21110 0 00 00 01333433 211 122 3566666654 333445677888887777889
Q ss_pred cccC----HHHHHHHHhhcCceEEechhcccccccCccc-cccccCccccceeeecCCccccccccceeEEecChhhHHH
Q psy9807 264 AFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPEN-RYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVN 338 (561)
Q Consensus 264 ~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~-~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~ 338 (561)
.+-| +++|.++|++||+.+++|..+.|.......+ ..-..|+ ..|.+++ .|.++.-+..|++.+++. +..
T Consensus 759 ~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~av~~~~~--i~~ 833 (972)
T PRK06149 759 GIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGAVITRRE--IAE 833 (972)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEEEEEcHH--HHh
Confidence 9989 9999999999999999999986554333211 1111244 4788855 898886566788888653 222
Q ss_pred hhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEeccc-
Q psy9807 339 AFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVIYEV- 416 (561)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~~~- 416 (561)
.+... .+... +-....+..-+++..+....-+++.++..++.++|++.|+++. ...++...
T Consensus 834 ~~~~~-~~~~s----------------T~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vr 896 (972)
T PRK06149 834 ALEAE-GYFFS----------------STGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVH 896 (972)
T ss_pred hhccC-CcccC----------------CCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe
Confidence 33211 12111 0112233333333333222223456677777788888887641 11111111
Q ss_pred cccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC
Q psy9807 417 LMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP 495 (561)
Q Consensus 417 ~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~ 495 (561)
..+. +.+.+. ..+. ...+.
T Consensus 897 G~Gl~~gvel~------------------------------------------------------~~~~------~~~~~ 916 (972)
T PRK06149 897 GMGLYLGVELV------------------------------------------------------RDRQ------TLEPA 916 (972)
T ss_pred ecceEEEEEEe------------------------------------------------------cCcc------cCCCC
Confidence 0111 011000 0000 00011
Q ss_pred cHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 496 NEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 496 ~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.+....+.+++.+.|.+ +.++... ..+||+... ...+++||+++++++.++..+
T Consensus 917 ~~~~~~i~~~l~~~Gvl-~~~~g~~-~~vl~~~Pp-l~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 917 TEETAAICDRLLELGVI-MQPTGDH-LNILKIKPP-LCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred hHHHHHHHHHHHhCCeE-EeecCCC-CCEEEEECC-CcCCHHHHHHHHHHHHHHHHh
Confidence 23356788899998854 4443221 357898633 457889999999999988654
No 341
>PLN00144 acetylornithine transaminase
Probab=99.02 E-value=2.7e-07 Score=96.81 Aligned_cols=176 Identities=13% Similarity=0.009 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+.+.++.+.++++.+.+ ...|++|||+||-.|+..||.....+ +...+. ....-..+++.+...
T Consensus 57 ~~~~~la~~l~~~~~~~-----------~v~f~~sGseA~e~AlklAr~~~~~~-~~~~~~-~~~~~r~~ii~~~~~yHG 123 (382)
T PLN00144 57 IPQVELAKRLVASSFAD-----------RVFFCNSGTEANEAAIKFARKYQRVR-APDKKD-PAASSATEFVSFSNSFHG 123 (382)
T ss_pred HHHHHHHHHHHhcCCCC-----------eEEEeCCcHHHHHHHHHHHHHHHhcc-CCCCcc-ccccccceEEEECCCccc
Confidence 34455666667665432 46899999999999999998753211 000000 000001234444433
Q ss_pred chHHHHHHhccC------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc--cC--HH
Q psy9807 206 TELEVVMLDWLG------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF--DC--LE 269 (561)
Q Consensus 206 ~s~~kaa~~~g~------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i--dp--l~ 269 (561)
.+.. +..+.+. .+..+| ..|+++|++.++. + .+.+|++.-.....|.+ ++ ++
T Consensus 124 ~t~~-~~s~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~~~~--~-----~~aavi~eP~q~~gg~~~~~~~~~~ 191 (382)
T PLN00144 124 RTLG-ALALTSKEQYRTPFEPLMPGVTFVE----YGNLEAARKLIQK--G-----KTAAVFVEPVQGEGGIYPATKEFLQ 191 (382)
T ss_pred ccHH-HHhcCCCccccccCCCCCCCeEEeC----CCCHHHHHHhcCC--C-----CeEEEEEccccCCCCCccCCHHHHH
Confidence 2211 1111111 123333 2378899888754 2 45566665433333332 34 99
Q ss_pred HHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
+|.++|++||+++++|.++.+.......+..-..++ ..| ..++.|.++.-+..|++..++
T Consensus 192 ~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~PD--i~t~sK~l~~G~pig~v~~~~ 251 (382)
T PLN00144 192 GLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV-EPD--IMTLAKPLAGGLPIGAVLVTE 251 (382)
T ss_pred HHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCC-CCC--EEEecccccCCcceEEEEEcH
Confidence 999999999999999999886533322111112233 357 555689998666778888754
No 342
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.02 E-value=1.4e-07 Score=99.58 Aligned_cols=198 Identities=10% Similarity=-0.052 Sum_probs=120.4
Q ss_pred HHHHHHHHhhccc-cccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCC--eEEeCChhHHHHHHHHHHHHHHH
Q psy9807 104 AIVADILSDSIAC-IGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGG--GVIQGTASEATLVALLGAKAKTM 180 (561)
Q Consensus 104 ~~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~--g~~t~ggT~anl~al~~ar~~~~ 180 (561)
..+.+.+...... ....|.......++=+.+.+|+.+.-+..-+ ... .++|+|+++|...++.+... .
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~-------~~~i~v~iT~Ga~~al~~~~~~l~~--~ 117 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALA-------AGRVATVQTPGGTGALRVGADFLKR--A 117 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccc-------cCeEEEEecCCccHHHHHHHHHHHH--h
Confidence 3455555555432 2224554555567777788887654332101 013 37899999997766533210 0
Q ss_pred HHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEe
Q psy9807 181 QRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVAT 256 (561)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t 256 (561)
++ ++.+++.... .....++...|.+++.+|. +++.+|++.|++.+.+ .. .+..+++.+
T Consensus 118 ------~p-------Gd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~--~~---~~~~~~i~~ 179 (396)
T PRK09257 118 ------FP-------DAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQ--AP---AGDVVLLHG 179 (396)
T ss_pred ------CC-------CCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHh--CC---CCCEEEEeC
Confidence 01 1234444444 4556667889999999996 3578999999998864 21 123566667
Q ss_pred cCCCCCcccc---CHHHHHHHHhhcCceEEechhcccccccC-c-ccccc--ccCc-cccceeeecCCcccccc-cccee
Q psy9807 257 LGTTNCCAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFIC-P-ENRYL--MKGV-ELADSFNFNPHKWMLVT-FDCSA 327 (561)
Q Consensus 257 ~gtt~tG~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~-~-~~~~~--~~gi-~~aDsi~~~~HK~l~~P-~g~g~ 327 (561)
...+.||.+- .+++|+++|++||+|++.|.+|.... .. . ..... +.+. ++ -.+..++.|.++.| .-+|.
T Consensus 180 ~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~-~~~~~~~~~~~~~~~~~~~-vi~i~SfSK~~~~~GlRiG~ 257 (396)
T PRK09257 180 CCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFG-DGLEEDAYGLRAFAAAGLE-LLVASSFSKNFGLYGERVGA 257 (396)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccc-cchHHHHHHHHHHHhcCCc-EEEEEEcCCcCcccccccee
Confidence 7788888874 57778889999999999999997532 11 0 01111 1111 11 25678999999864 45677
Q ss_pred EEe
Q psy9807 328 MWL 330 (561)
Q Consensus 328 l~~ 330 (561)
+++
T Consensus 258 ~~~ 260 (396)
T PRK09257 258 LSV 260 (396)
T ss_pred EEE
Confidence 763
No 343
>PRK05965 hypothetical protein; Provisional
Probab=99.02 E-value=6.8e-07 Score=95.86 Aligned_cols=329 Identities=9% Similarity=0.004 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.|.+++.-+- ...+|++|||+||-.|+..||...... +.+ ...+++.....
T Consensus 90 ~~~~~lae~L~~~~p~~~---------~~v~f~~sGSEAve~AlKlAr~~~~~~---g~~------~r~kii~~~~~YHG 151 (459)
T PRK05965 90 EPAIRLAAKLAERAPGSL---------NHVYFTLGGSDAVDSAVRFIRHYWNAT---GRP------SKKQFISLERGYHG 151 (459)
T ss_pred HHHHHHHHHHHhhCCCCc---------CEEEEeCChhHHHHHHHHHHHHHHHhc---CCC------CccEEEEecCCcCc
Confidence 344556667777653111 246899999999999999999764211 000 01234444333
Q ss_pred chHHHHHHhc---------c---CCeEEeeC-CCC----ccCh--------hhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 206 TELEVVMLDW---------L---GKMLDLPK-EFL----ACSG--------GKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 206 ~s~~kaa~~~---------g---~~v~~v~~-~~g----~~d~--------~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
.+.. +..+. + ..+..+|. ... .-|. ++|++.|++ . ....+.+|++.-...
T Consensus 152 ~t~~-a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~--~~~~iAAvIvEPiqg 226 (459)
T PRK05965 152 SSSV-GAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAE--L--GADNVAAFFCEPIQG 226 (459)
T ss_pred ccHH-HHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHh--c--CCCceEEEEEecccc
Confidence 2211 11111 1 12334443 111 1232 466776654 1 113566677765554
Q ss_pred CCccc----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhh
Q psy9807 261 NCCAF----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSW 335 (561)
Q Consensus 261 ~tG~i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~ 335 (561)
..|.+ +=++++.++|++||+.+++|..+.|+.....-+..-..++ ..|.+++ -|.|+.=+ ..|+++.++.
T Consensus 227 ~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~-- 301 (459)
T PRK05965 227 SGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPDLMTV--AKGLTSGYVPMGAVLMSDH-- 301 (459)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCCeEEe--chhhccCCcceeEEEEcHH--
Confidence 44544 4588999999999999999998877644332222112244 4788887 78887653 6788887654
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
+...+....... + .+....+-....+..-++++.+..-.-+++.++..++.++|.+.|+++....++..
T Consensus 302 i~~~~~~~~~~~-----~------~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~ 370 (459)
T PRK05965 302 VYQGIADGAGAA-----A------PVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGD 370 (459)
T ss_pred HHHHHhcccccc-----c------cccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEE
Confidence 222232111000 0 00000111123333333333332222234567777888888888876522211111
Q ss_pred ccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeec-CC
Q psy9807 416 VLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL-KG 494 (561)
Q Consensus 416 ~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~-~~ 494 (561)
+++..+-.+. |++..+. .... ..
T Consensus 371 ---------vrG~Gl~~gi-------------------------------------------e~~~~~~----~~~~~~~ 394 (459)
T PRK05965 371 ---------VRGRGLLGAL-------------------------------------------ELVADKA----TKTPFDA 394 (459)
T ss_pred ---------EeecceEEEE-------------------------------------------EEecccc----ccCCCCc
Confidence 1111100000 0000000 0000 00
Q ss_pred CcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9807 495 PNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKEE 557 (561)
Q Consensus 495 ~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~~ 557 (561)
.......+...+.++|.+. .+ .|..++|+... ...+++||+++++.+.++.+++.+++
T Consensus 395 ~~~~~~~i~~~~~~~Gll~-~~---~g~~~i~~~Pp-L~it~~ei~~~~~~l~~~l~~~~~~~ 452 (459)
T PRK05965 395 ALDPADRIFDRAYANGLVF-RA---FGDGVLGFAPA-LCCTEGEFDLIFERTRKTLDDVLADP 452 (459)
T ss_pred hhHHHHHHHHHHHhCCeEE-Ee---cCCcEEEEECC-CcCCHHHHHHHHHHHHHHHHHHhcCc
Confidence 1123456788888888654 22 24457998744 56688999999999999998876554
No 344
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.01 E-value=3.6e-07 Score=94.35 Aligned_cols=275 Identities=9% Similarity=-0.015 Sum_probs=156.6
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccch-HHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACTE-LEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~s-~~k 210 (561)
.++++++++.+|.++. ...++|+|++++.. .+.. .+. .+++++....|+ ...
T Consensus 56 ~~L~~~ia~~~~~~~~--------~~I~i~~Gs~e~i~-~l~~----~~~--------------~g~v~v~~P~y~~y~~ 108 (339)
T PRK06959 56 DGLAACAARYYGAPDA--------AHVLPVAGSQAAIR-ALPA----LLP--------------RGRVGIAPLAYSEYAP 108 (339)
T ss_pred HHHHHHHHHHhCCCCc--------ccEEECcCHHHHHH-HHHH----hcC--------------CCeEEEcCCCcHHHHH
Confidence 5777889999999742 25678888877753 2221 110 123444333344 455
Q ss_pred HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH---HhhcCceEEechh
Q psy9807 211 VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV---CRQKDVWLHVDAA 287 (561)
Q Consensus 211 aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i---a~~~~~~lhVDaA 287 (561)
+++..|.+++.+|.+. +. +.+ ...+++.+.-++.||.+-+.+++.++ |++++.|+++|.+
T Consensus 109 ~~~~~g~~~~~v~~~~-----~~----~~~--------~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEa 171 (339)
T PRK06959 109 AFARHGHRVVPLDEAA-----DT----LPA--------ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEA 171 (339)
T ss_pred HHHHCCCEEEeecccc-----hh----ccc--------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECC
Confidence 6788888888887522 11 222 12245666667899999776666655 5678999999999
Q ss_pred cccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 288 YAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
|.-.. ..+...... .-+. =.+.-++.|.++.|. =+|.++. +.+.+.........|-
T Consensus 172 y~~~~-~~~s~~~~~-~~~~-vi~l~SfSK~~gl~GlRiGy~v~-~~~li~~l~~~~~~~~------------------- 228 (339)
T PRK06959 172 FADTL-PAASLAAHT-DRPG-LVVLRSVGKFFGLAGVRAGFVLA-APALLAALRDALGAWT------------------- 228 (339)
T ss_pred CccCC-Ccccchhcc-CCCC-EEEEecChhhcCCcchheEEEec-CHHHHHHHHHhcCCCC-------------------
Confidence 98532 112111111 1111 156789999998663 3566555 4444433222211110
Q ss_pred CCcchHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHH
Q psy9807 367 RRFRSLKLWFVLRLLGV-KYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVL 445 (561)
Q Consensus 367 r~~~al~lw~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~ 445 (561)
...+...++...+.. +-.++..++..+..+++.+.|++. |+++.. . +. |
T Consensus 229 --vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~--~-~~--f---------------------- 278 (339)
T PRK06959 229 --VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVHA--T-PL--F---------------------- 278 (339)
T ss_pred --CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCccC--c-ce--E----------------------
Confidence 112223333333322 234455566677778888888887 665541 1 11 1
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEE
Q psy9807 446 RLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFL 525 (561)
Q Consensus 446 ~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~l 525 (561)
+.++.. + ..++.+.|.+.|...- .. ....++
T Consensus 279 ------------------------------------------~~~~~~--~--~~~l~~~l~~~GI~vr-~~--~~~~~l 309 (339)
T PRK06959 279 ------------------------------------------SWTDDP--R--AAALHAALARRGIWTR-YF--APPPSV 309 (339)
T ss_pred ------------------------------------------EEEeCC--C--HHHHHHHHHhCCeEEE-EC--CCCCeE
Confidence 111111 1 3467888888875543 22 234589
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 526 RMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 526 R~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
|+++.. ++++.++++++|+++.+.+..
T Consensus 310 Risi~~---~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 310 RFGLPA---DEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred EEECCC---CHHHHHHHHHHHHHHHHHHhh
Confidence 999643 456999999999887766543
No 345
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.00 E-value=9.7e-07 Score=93.80 Aligned_cols=228 Identities=14% Similarity=0.017 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---c
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---T 206 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~ 206 (561)
...++.+.|.+++..+.. ...+|++|||+||-.|+..||.... .++++..... .
T Consensus 84 ~~~~la~~l~~~~p~~~~--------~~~~f~~sGseA~e~AlklAr~~tg---------------r~~ii~~~~~yHG~ 140 (421)
T PRK06777 84 SYVTLAERINALAPIDGP--------AKTAFFTTGAEAVENAVKIARAYTG---------------RPGVIAFGGAFHGR 140 (421)
T ss_pred HHHHHHHHHHHhCCCCCC--------ceEEEeCCcHHHHHHHHHHHHHhhC---------------CCeEEEEcCCcCCc
Confidence 344556666776542110 1468999999999999999986521 1234444433 2
Q ss_pred hHHHHHHhccC-------------CeEEeeC-CCC-----ccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc-c
Q psy9807 207 ELEVVMLDWLG-------------KMLDLPK-EFL-----ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF-D 266 (561)
Q Consensus 207 s~~kaa~~~g~-------------~v~~v~~-~~g-----~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i-d 266 (561)
+.. +..+.+. .+..+|. +.. .-+++.+++.+++ .. .+..+.+|+..-.....|.. -
T Consensus 141 t~~-~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~--~~-~~~~iaavi~Epv~~~~G~~~~ 216 (421)
T PRK06777 141 TLL-TMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKA--DI-APDQVAAILLEPIQGEGGFNVA 216 (421)
T ss_pred cHH-HHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHh--cc-CCCceEEEEECCccCCCCCccC
Confidence 211 1111111 1233332 111 1235667777753 11 12246677776666666643 3
Q ss_pred C---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccC
Q psy9807 267 C---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVD 343 (561)
Q Consensus 267 p---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~ 343 (561)
| +++|.++|++||+++++|..|.|.......+.....++ ..|.+ +..|.++.-+..|.++.++ + +.+.+...
T Consensus 217 ~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~pDiv--~~sK~l~~G~pigav~~~~-~-i~~~~~~~ 291 (421)
T PRK06777 217 PPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDV-KPDLI--TMAKSLGGGMPISAVVGRA-E-VMDAPAPG 291 (421)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCC-CCCEE--eeehhhcCCCceEEEEEcH-H-HHhccCCC
Confidence 4 99999999999999999999886433221111001122 35765 4689987445577777753 2 22222110
Q ss_pred CCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 344 PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
.+ . .+-....+...+++..+....-+++.++..++.+++.+.|+++
T Consensus 292 -~~------~-----------~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l 337 (421)
T PRK06777 292 -GL------G-----------GTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKA 337 (421)
T ss_pred -CC------C-----------CCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0001122333333333321111456777778888888888764
No 346
>PRK06917 hypothetical protein; Provisional
Probab=99.00 E-value=5.2e-07 Score=96.43 Aligned_cols=325 Identities=12% Similarity=0.035 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.+.++.+.|.+++.-.. ...+|++|||+||..|+..||.+...+ . .+ ...+++.+...
T Consensus 73 ~~~~~~lae~L~~~~p~~~---------~~v~f~~sGsEAve~AlklAr~~~~~r-g--~t------~r~~ii~~~~~yH 134 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDL---------NWSFFVNSGSEANETAMKIAIQHFQER-G--IQ------GKHKILSRWMSYH 134 (447)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEeCChHHHHHHHHHHHHHHHHhc-C--CC------CCCEEEEECCCcC
Confidence 4556677778888764321 146899999999999999998764222 0 00 01234433322
Q ss_pred -chHHHHHHhccC------------CeEEeeC-CCCc------------cChhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 206 -TELEVVMLDWLG------------KMLDLPK-EFLA------------CSGGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 206 -~s~~kaa~~~g~------------~v~~v~~-~~g~------------~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
.+..-. .+.+. .+..+|. ...+ -+++.+++.+++ . .+..+.+|++.-..
T Consensus 135 G~t~~al-s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~--~--~~~~iAAvi~EPi~ 209 (447)
T PRK06917 135 GITMGAL-SMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIER--I--GAEHIAAFIAEPII 209 (447)
T ss_pred CccHHHH-HhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHh--c--CCCceEEEEEeccc
Confidence 222111 11111 1223332 1111 123566666654 1 11246666666444
Q ss_pred CCC-ccc----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecCh
Q psy9807 260 TNC-CAF----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 260 t~t-G~i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
... |.+ +=++++.++|++||+.+++|..+.|......-+.....++ ..|.+++ .|.++.=+ ..|++..++.
T Consensus 210 g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~PDi~~~--gK~l~~G~~Pi~a~~~~~~ 286 (447)
T PRK06917 210 GAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-EPDIMTL--GKGLGAGYTPIAATVVSDR 286 (447)
T ss_pred cCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-CCCEEEe--eehhccCCcceEEEEEcHH
Confidence 332 333 3488999999999999999999876433332221111233 3687665 89988643 4677777543
Q ss_pred hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHH---HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-C
Q psy9807 334 SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKL---WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-R 409 (561)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~l---w~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g 409 (561)
.. ..+......+... .+-....+.+ .++++.+..+ ++.++..++.++|.+.|+++. .
T Consensus 287 -i~-~~~~~~~~~~~~~--------------~T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~ 347 (447)
T PRK06917 287 -VM-EPILRGSRSIMSG--------------HTLSANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQQ 347 (447)
T ss_pred -HH-HHHhccCcccccc--------------cCCCCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhc
Confidence 22 2232111111110 0111223333 3444444332 456677778888888877641 1
Q ss_pred eEEeccc-cccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcc
Q psy9807 410 FEVIYEV-LMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 487 (561)
Q Consensus 410 ~~l~~~~-~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~ 487 (561)
..++... ..+. +.+.+.. ++...
T Consensus 348 ~~~i~~vrG~Gl~~~ie~~~------------------------------------------------------~~~~~- 372 (447)
T PRK06917 348 STIIGDVRGKGLLIGVEFVA------------------------------------------------------DKKTK- 372 (447)
T ss_pred CCCEEEEeecceEEEEEEec------------------------------------------------------cCCcC-
Confidence 2222111 1111 1111110 00000
Q ss_pred eeeecCCCcHHHHHHHHHHHhCCcEEEEeee----ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 488 VCFRLKGPNEINEKLLKRINGNGKIHLVPSK----IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 488 v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~----~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
-. ..+..+....+...+.+.|.+.. +.. -++..++|++.. ...|++||+++++++.++.+++.++
T Consensus 373 ~~--~~~~~~~~~~~~~~~~~~Gvl~~-~~~~~~~g~~~~~i~l~Pp-l~it~~eid~~~~~l~~~l~~~~~~ 441 (447)
T PRK06917 373 QP--FSKSQAVASELISVAAKNGLLLY-PAVAGQDGKEGDAVIIAPP-MTITYSELDELLSIFAKSVEEMMQK 441 (447)
T ss_pred CC--CcchhHHHHHHHHHHHhCCcEEE-ecccccCCCCCCEEEEECC-CcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 00 00112345678888889986543 221 112358998743 4568899999999999998887554
No 347
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.00 E-value=2e-07 Score=100.49 Aligned_cols=199 Identities=9% Similarity=0.012 Sum_probs=118.3
Q ss_pred HHHHHHHHHhhccccccccccChhhHHHHHHHHH-HHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHH-HHH
Q psy9807 103 PAIVADILSDSIACIGFTWIASPACTELEVVMLD-WLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKA-KTM 180 (561)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~-~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~-~~~ 180 (561)
+..+-++..+.... .|...+..-++-+++++ ++.+..+..... .+....++|+||+++...++.+... ..+
T Consensus 115 ~~~v~e~~~~~~~~---~Y~~~~g~~~lreaia~~~~~~~~~~~~~~----~~~~~I~vT~Ga~~al~~~~~aL~~~~ll 187 (527)
T PRK09275 115 DEFVYELVDGIIGD---NYPVPDRMLKHTEKIVKDYLRQEMCGGRPP----KGEFDLFAVEGGTAAMCYIFDSLKENGLL 187 (527)
T ss_pred CHHHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCC----CCcCeEEEeCCHHHHHHHHHHHHhhhhcC
Confidence 44555555444332 35555555566666666 444433321100 0012578999999998777664221 111
Q ss_pred HHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccC--CeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEE
Q psy9807 181 QRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLG--KMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVV 254 (561)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~--~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv 254 (561)
. | ++++++.... ......+.+.+. .++.++. +++.+|+++|++++.+ ++.+|+
T Consensus 188 ~------p-------GD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~--------~tkai~ 246 (527)
T PRK09275 188 K------A-------GDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP--------SIKALF 246 (527)
T ss_pred C------C-------CCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC--------CCCEEE
Confidence 1 1 2355665555 445555666654 4555554 3468999999987755 566777
Q ss_pred EecCCCCCccccC---HHHHHHHHhh--cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc-ceeE
Q psy9807 255 ATLGTTNCCAFDC---LEEIGQVCRQ--KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAM 328 (561)
Q Consensus 255 ~t~gtt~tG~idp---l~eI~~ia~~--~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l 328 (561)
++..++.||.+-+ +++|+++|++ +|+|+++|.+|+-.. +...........--.+..++.|.++.|.- .|.+
T Consensus 247 l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~---~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i 323 (527)
T PRK09275 247 LVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFV---DDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVI 323 (527)
T ss_pred EeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhc---ccccCHHHhCCCCEEEEeehhhhccCcHhHHhhh
Confidence 7788999999976 7788888954 599999999998532 12211111111113567788999976643 5666
Q ss_pred EecC
Q psy9807 329 WLKD 332 (561)
Q Consensus 329 ~~r~ 332 (561)
...+
T Consensus 324 ~~~~ 327 (527)
T PRK09275 324 ALHE 327 (527)
T ss_pred hcCc
Confidence 5544
No 348
>PRK07482 hypothetical protein; Provisional
Probab=99.00 E-value=5.7e-07 Score=96.49 Aligned_cols=180 Identities=11% Similarity=-0.018 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.+.++.+.|++++.-.- ....|++|||+||-.|+..||.....+ +.+ ...+++.....
T Consensus 93 ~~~~~~lAe~L~~~~p~~~---------~~v~f~~sGSEAve~AlKlAr~~~~~~---g~~------~r~~Ii~~~~~YH 154 (461)
T PRK07482 93 TEASITLSKRIIDRAPAGM---------SKVYYGLSGSDANETQIKLVWYYNNVL---GRP------EKKKIISRWRGYH 154 (461)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCchHHHHHHHHHHHHHHHHhc---CCC------CCceEEEecCccC
Confidence 4566667777777763111 145899999999999999998653211 000 01234443322
Q ss_pred -chHHHHHHhcc------------CCeEEeeC-CCCc-------------cChhhHHHHHhhhchhhcCCceEEEEEecC
Q psy9807 206 -TELEVVMLDWL------------GKMLDLPK-EFLA-------------CSGGKGGGVIQRKSDREMCSDLLQVVATLG 258 (561)
Q Consensus 206 -~s~~kaa~~~g------------~~v~~v~~-~~g~-------------~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g 258 (561)
.++. +..+.+ ..+..+|. ...+ -+++.|++.+.. . .+..+.+|++.-.
T Consensus 155 G~t~g-a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~--~~~~iAAvi~EPv 229 (461)
T PRK07482 155 GSGVV-TGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILA--E--GPDTIAAFIAEPV 229 (461)
T ss_pred CccHh-hhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHh--c--CCCcEEEEEECCc
Confidence 2211 111111 12333333 1111 145677777743 1 1225667777655
Q ss_pred CCCCccc----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecCh
Q psy9807 259 TTNCCAF----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 259 tt~tG~i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
....|.+ +=+++|.++|++||+.+++|..+.|......-+.....|+ ..|.+++ -|.++.=+ +.|+++.++.
T Consensus 230 qg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~ 306 (461)
T PRK07482 230 LGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDLITV--AKGLTSAYAPLSGSIVGEK 306 (461)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCEEEE--ccccccCccccceeeecHH
Confidence 5444555 3588999999999999999999877644433222222344 4798886 79887543 5666776543
No 349
>PRK08354 putative aminotransferase; Provisional
Probab=98.98 E-value=2.8e-07 Score=94.01 Aligned_cols=147 Identities=15% Similarity=-0.004 Sum_probs=94.9
Q ss_pred HHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHH
Q psy9807 134 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVM 212 (561)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa 212 (561)
+.+++++.+|- ..++|+|++++....+.... + ++.+++.... .....++
T Consensus 45 l~~~ia~~~~~------------~I~vt~G~~~al~~~~~~~~-----~-------------gd~vlv~~P~y~~~~~~~ 94 (311)
T PRK08354 45 LEEEFSKLFGE------------PIVITAGITEALYLIGILAL-----R-------------DRKVIIPRHTYGEYERVA 94 (311)
T ss_pred HHHHHHHHHCC------------CEEECCCHHHHHHHHHHhhC-----C-------------CCeEEEeCCCcHHHHHHH
Confidence 45677887763 46889999998654332110 0 2345555555 6677778
Q ss_pred HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEechhcc
Q psy9807 213 LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 213 ~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA~g 289 (561)
+..|.+++.++ +|++.|++.+.+ +.+++.+..++.||.+-+ +++|+++|++||+|+++|.+|+
T Consensus 95 ~~~g~~~~~~~-----~d~~~l~~~~~~---------~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~ 160 (311)
T PRK08354 95 RFFAARIIKGP-----NDPEKLEELVER---------NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFI 160 (311)
T ss_pred HHcCCEEeecC-----CCHHHHHHhhcC---------CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcch
Confidence 88888886653 578888877643 234666666789998865 5666778899999999999997
Q ss_pred cccccCccccccccCccccceeeecCCccccccc-cceeEEe
Q psy9807 290 GSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWL 330 (561)
Q Consensus 290 g~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~ 330 (561)
.... .. .. .. - .--.+..++.|.++.|. =+|.+..
T Consensus 161 ~f~~-~~--~~-~~-~-~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 161 DFVK-KP--ES-PE-G-ENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred hccc-cc--cc-cC-C-CcEEEEeccHhhcCCccceeeeeee
Confidence 5322 11 10 00 0 11356678899998663 3565555
No 350
>PRK07483 hypothetical protein; Provisional
Probab=98.97 E-value=1e-06 Score=94.02 Aligned_cols=327 Identities=13% Similarity=0.027 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.|++++.-.- ....|++|||+||-.|+..||...... +.+ ...+++.+...
T Consensus 73 ~~~~~lae~L~~~~p~~~---------~~v~f~~sGsEAve~AlklAr~~~~~~---g~~------~r~~Ii~~~~~YHG 134 (443)
T PRK07483 73 EPAEALADRLVAAAPAGL---------EHVYFVSGGSEAVEAALKLARQYFVEI---GQP------QRRHFIARRQSYHG 134 (443)
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEcCCcHHHHHHHHHHHHHHHHhc---CCC------CCcEEEEECCCcCC
Confidence 344556667777653111 146899999999999999999763211 101 01234443332
Q ss_pred chHHHHHHhcc------------CCeEEeeC-CCCcc-------------ChhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 206 TELEVVMLDWL------------GKMLDLPK-EFLAC-------------SGGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~-~~g~~-------------d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
.+.. +..+.+ ..+..+|. ...+. .++.|++.+.+ . ....+.+|++.-..
T Consensus 135 ~t~~-a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~--~~~~iAAvivEPiq 209 (443)
T PRK07483 135 NTLG-ALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILE--L--GPDTVAAFVAETVV 209 (443)
T ss_pred cCHH-HhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHh--c--CCCceEEEEEeCcc
Confidence 2211 111111 12333443 11111 02455655542 1 11245566665444
Q ss_pred C-CCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecCh
Q psy9807 260 T-NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 260 t-~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
. ..|.+-| +++|.++|++||+.+++|..+.|......-+..-..++ ..|.+++ -|.++.=+ ..|+++.++.
T Consensus 210 g~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~ 286 (443)
T PRK07483 210 GATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDLVTI--AKGLGAGYQPIGAVLASDR 286 (443)
T ss_pred cCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCeeee--hhhhccCccccEEEEEcHH
Confidence 3 2355554 99999999999999999999876543332111111234 4688887 78887654 5788888654
Q ss_pred hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEE
Q psy9807 334 SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD-DRFEV 412 (561)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~g~~l 412 (561)
+...+.....++.+. .+-....+..-+++..+....-+.+.++..++.++|.+.|++. ....+
T Consensus 287 --i~~~~~~~~~~~~h~--------------~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~ 350 (443)
T PRK07483 287 --IYDAIADGSGFFQHG--------------HTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPH 350 (443)
T ss_pred --HHHHHhcCCCccccC--------------CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 222232111111110 1111233333333333322222345677777888888888652 22222
Q ss_pred eccc-cccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 413 IYEV-LMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 413 ~~~~-~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
+... ..++ +.+.+.. .+.. ..
T Consensus 351 i~~vRG~Glm~gie~~~------------------------------------------------------~~~~---~~ 373 (443)
T PRK07483 351 VGDIRGRGLFVGVELVA------------------------------------------------------DRAT---KA 373 (443)
T ss_pred eeeEeecccEEEEEEee------------------------------------------------------cccc---cC
Confidence 2111 1111 1111100 0000 00
Q ss_pred ecCCCcHHHHHHHHHHHhCCcEEEEe-eeECC--EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRINGNGKIHLVP-SKIRD--VYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~g--~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
...........+.+.+.+.|.+.... ...++ ..++|+... ...+++|||+++++++++..+++.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~Pp-L~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 374 PFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPP-FIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00001133457788888998665321 11111 248998744 577899999999999999887654
No 351
>PRK07481 hypothetical protein; Provisional
Probab=98.97 E-value=1.1e-06 Score=94.17 Aligned_cols=245 Identities=11% Similarity=-0.014 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
..+.++.+.|.++++-+.. ....|++|||+||-.|+..||...... +.+ ...+++.....
T Consensus 86 ~~~~~lae~L~~~~~~~~~--------~~v~f~~sGsEAve~AlklAr~~~~~~---g~~------~r~~ii~~~~~yHG 148 (449)
T PRK07481 86 PRAIELSYELIDMFAPEGM--------RRVFFSSGGSDSVETALKLARQYWKVR---GQP------ERTKFISLKQGYHG 148 (449)
T ss_pred HHHHHHHHHHHHhcCCCCC--------CEEEEcCchHHHHHHHHHHHHHHHHhc---CCC------CCcEEEEECCCcCC
Confidence 4555667777777642111 246899999999999999998753211 000 01234444433
Q ss_pred chHHHHHHhcc------------CCeEEeeC-CC-----CccChhhHHHHHhhhc--hh--hcCCceEEEEEecCCCCCc
Q psy9807 206 TELEVVMLDWL------------GKMLDLPK-EF-----LACSGGKGGGVIQRKS--DR--EMCSDLLQVVATLGTTNCC 263 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~-~~-----g~~d~~~Le~~i~~~~--~~--~~g~~p~~vv~t~gtt~tG 263 (561)
.+.. +..+.+ ..+..++. .. +.-|++.+++.+.+.- .. ..+..+.+|++.-.....|
T Consensus 149 ~t~g-a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG 227 (449)
T PRK07481 149 THFG-GASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGG 227 (449)
T ss_pred cchh-hhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcC
Confidence 2211 111111 12333332 11 1124444433321100 00 1223577888877777777
Q ss_pred cccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHH
Q psy9807 264 AFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVN 338 (561)
Q Consensus 264 ~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~ 338 (561)
.+-| ++++.++|++||+.+++|..+.|......-+..-..++ ..|.+++ -|.++.=+ ..|++++++. +..
T Consensus 228 ~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~--i~~ 302 (449)
T PRK07481 228 VIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCL--AKGITSGYVPLGATMVNAR--IAD 302 (449)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEE--eecccCCCcCceEEEEcHH--HHH
Confidence 7765 99999999999999999998776533222111111234 4788877 78887542 4677777653 222
Q ss_pred hhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 339 AFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
.+...... .. ......+-....+..-++++.+..-.-....++..++.++|.+.|+++
T Consensus 303 ~~~~~~~~------~~-----~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 360 (449)
T PRK07481 303 AFEANADF------GG-----AIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPL 360 (449)
T ss_pred HHhccCcc------cc-----ccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 23211100 00 000001111233333333333332222345667777788888887764
No 352
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.96 E-value=4.1e-07 Score=97.56 Aligned_cols=99 Identities=9% Similarity=0.013 Sum_probs=64.5
Q ss_pred ChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc----CHHHHHHHHhhcCceEEechhcccccccCccccccccCc
Q psy9807 230 SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD----CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV 305 (561)
Q Consensus 230 d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id----pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi 305 (561)
+.+.+++.+++ .......+.+|++.-.....|.+- =++++.++|++||+.+++|..+.|......-+..-..++
T Consensus 214 ~~~~l~~~i~~--~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv 291 (464)
T PRK06938 214 NLHYLENLLDD--PESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI 291 (464)
T ss_pred HHHHHHHHHHh--hccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC
Confidence 35677777754 211112466777765555556554 489999999999999999998776543322111111234
Q ss_pred cccceeeecCCccccccccceeEEecCh
Q psy9807 306 ELADSFNFNPHKWMLVTFDCSAMWLKDP 333 (561)
Q Consensus 306 ~~aDsi~~~~HK~l~~P~g~g~l~~r~~ 333 (561)
..|.+++ -|.++.-+..|+++.++.
T Consensus 292 -~PDiv~~--gKglggG~PlsAv~~~~~ 316 (464)
T PRK06938 292 -IPDVVVL--SKAIGGSLPLAVVVYREW 316 (464)
T ss_pred -CCCEEEe--eccccCCCceEEEeehhH
Confidence 4688888 788876677888888653
No 353
>KOG0257|consensus
Probab=98.96 E-value=2.4e-07 Score=93.57 Aligned_cols=272 Identities=11% Similarity=0.001 Sum_probs=168.0
Q ss_pred ChHHHHHHHHHhhccc-cccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHH
Q psy9807 101 SYPAIVADILSDSIAC-IGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKT 179 (561)
Q Consensus 101 ~~~~~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~ 179 (561)
.+|..+.+.+..+... ....|..+-...++-+.+.+.+++++|-... ...+.++|.|++++...++.+..+.
T Consensus 44 ~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~------~~~eVlVT~GA~~ai~~~~~~l~~~- 116 (420)
T KOG0257|consen 44 PPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLD------PDDEVLVTAGANEAISSALLGLLNP- 116 (420)
T ss_pred CCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccC------CcccEEEecCchHHHHHHHHHHcCC-
Confidence 3455555555444332 2223444445567788888888887664321 1236899999999988787764322
Q ss_pred HHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC---------CCCccChhhHHHHHhhhchhhcCCc
Q psy9807 180 MQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK---------EFLACSGGKGGGVIQRKSDREMCSD 249 (561)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~---------~~g~~d~~~Le~~i~~~~~~~~g~~ 249 (561)
++.++|.... .+-....++.|+..+.||. +++.+|++.||.++.+ +
T Consensus 117 ----------------GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~--------k 172 (420)
T KOG0257|consen 117 ----------------GDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE--------K 172 (420)
T ss_pred ----------------CCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccC--------C
Confidence 3567777777 5656667777877666654 4679999999999988 7
Q ss_pred eEEEEEecCCCCCcccc---CHHHHHHHHhhcCceEEechhcccccccCcc--ccc-cccCccccceeeecCCccccccc
Q psy9807 250 LLQVVATLGTTNCCAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPE--NRY-LMKGVELADSFNFNPHKWMLVTF 323 (561)
Q Consensus 250 p~~vv~t~gtt~tG~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~--~~~-~~~gi~~aDsi~~~~HK~l~~P~ 323 (561)
+.+|+.+.-.+.+|.+- .|++|+++|++||+|++.|.+|.. .++.+. .+. .+.|+..--.=+.|+.|.++...
T Consensus 173 Tk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~-~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TG 251 (420)
T KOG0257|consen 173 TKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEW-LVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTG 251 (420)
T ss_pred ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHH-HhhCCCcceeeecCCchhheEEEeccccceeeeee
Confidence 88999999999999885 699999999999999999999873 232221 111 11344333445667888887532
Q ss_pred -cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-----cchHHHHHHHHHhh-HHHHHHHHHHHHHH
Q psy9807 324 -DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-----FRSLKLWFVLRLLG-VKYLQEYIRKQISL 396 (561)
Q Consensus 324 -g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-----~~al~lw~~l~~~g-~~g~~~~~~~~~~l 396 (561)
=.|.++. ++..+............ .++.. ..+++.-.+++.-+ ..-+.++.+...+.
T Consensus 252 WrlGW~ig-p~~L~~~~~~vh~~~~~---------------~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~k 315 (420)
T KOG0257|consen 252 WRLGWAIG-PKHLYSALFPVHQNFVF---------------TCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEK 315 (420)
T ss_pred eeeeeeec-hHHhhhhHHHHhhcccc---------------ccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHH
Confidence 2444444 44333322211111100 01111 11111111112112 23344578888889
Q ss_pred HHHHHHHHhcCCCeEEeccccccce
Q psy9807 397 AKEFEQLVRSDDRFEVIYEVLMGLV 421 (561)
Q Consensus 397 a~~l~~~l~~~~g~~l~~~~~~~~v 421 (561)
.+.+.+.|.++ |+.+..+....-+
T Consensus 316 rdil~k~L~~l-g~~v~~p~gayyl 339 (420)
T KOG0257|consen 316 RDILAKALEEL-GLKVTGPEGAYYL 339 (420)
T ss_pred HHHHHHHHHhc-CCccccCCCceEE
Confidence 99999999998 9998877654443
No 354
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.95 E-value=1.4e-06 Score=93.48 Aligned_cols=317 Identities=13% Similarity=0.051 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++...++.+.|++++.-+. ....|++|||+||-.|+..||.....+ +. + ...+++.....
T Consensus 89 ~~~~~~lae~L~~~~p~~~---------~~v~f~~sGsEAve~AlKlAr~~~~~~-g~--t------~r~~ii~~~~~yH 150 (466)
T PRK07030 89 HEPVIELSERLVKITPPGL---------SRCFYADNGSSAIEVALKMSFHYWRNR-GK--P------RKKRFVTLTNSYH 150 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCCcHHHHHHHHHHHHHHHHHh-CC--C------CCcEEEEECCCcC
Confidence 3455667777777763111 246899999999999999998764221 00 0 01234444333
Q ss_pred -chHHHHHHhccC------------CeEEeeC-CCC------------ccChhhHHHHHhhhchhhcCCceEEEEEec-C
Q psy9807 206 -TELEVVMLDWLG------------KMLDLPK-EFL------------ACSGGKGGGVIQRKSDREMCSDLLQVVATL-G 258 (561)
Q Consensus 206 -~s~~kaa~~~g~------------~v~~v~~-~~g------------~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~-g 258 (561)
.+.. +..+.+. .+..+|. ... .-+++.+++.+++ .+..+.+|++.- .
T Consensus 151 G~t~g-a~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~-----~~~~iAAvi~EP~i 224 (466)
T PRK07030 151 GETLA-AMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE-----HHDEIAAVIVEPLI 224 (466)
T ss_pred cccHH-HHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh-----CCCceEEEEEeccc
Confidence 2211 1112111 2333443 111 1134566777754 123566666665 3
Q ss_pred CCCCccc----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecCh
Q psy9807 259 TTNCCAF----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 259 tt~tG~i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
....|.+ +=++++.++|++||+.+++|..+.|......-+.....++ ..|.+++ -|.++.=+ ..|++..++.
T Consensus 225 qg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~e 301 (466)
T PRK07030 225 QGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLCL--SKALTGGYLPLAAVLTTDT 301 (466)
T ss_pred ccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEee--ehhccCCcccceEEEecHH
Confidence 4444555 3489999999999999999998776543332222112244 4788888 78887653 5777777653
Q ss_pred hhHHHhhccCC----CccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy9807 334 SWVVNAFNVDP----LYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLLGVKYLQEYIRKQISLAKEFEQLVRS 406 (561)
Q Consensus 334 ~~l~~~~~~~~----~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 406 (561)
+...+.... .+.. ..+-....+..- ++++.+-. ++++++..++.++|.+.|++
T Consensus 302 --i~~~~~~~~~~~~~~~h---------------~~T~~gnpla~aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~ 361 (466)
T PRK07030 302 --VYQAFYDDYPTLRAFLH---------------SHSYTGNPLACAAALATLDIFEQ---DNVIENNRALARRMAEATAH 361 (466)
T ss_pred --HHHHHhccccccccccc---------------CCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHH
Confidence 222232110 1110 011112333333 34444433 34667778888888888876
Q ss_pred CCCeEEeccc-cccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhh
Q psy9807 407 DDRFEVIYEV-LMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL 484 (561)
Q Consensus 407 ~~g~~l~~~~-~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~ 484 (561)
+.....+... ..+. +.+.+.. ++.
T Consensus 362 l~~~~~v~~vrG~Gl~~gie~~~------------------------------------------------------~~~ 387 (466)
T PRK07030 362 LADHPHVAEVRQTGMILAIEMVQ------------------------------------------------------DKA 387 (466)
T ss_pred HhcCCCEEEeEeceeEEEEEecc------------------------------------------------------Ccc
Confidence 5222111111 1111 1111100 000
Q ss_pred hcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 485 MGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 485 ~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
. .-.+. ........+.+++.+.|.+. .+. + .++|+. .....+++||+++++.+++..+++.
T Consensus 388 ~-~~~~~--~~~~~~~~i~~~~~~~Gvl~-~~~---g-~~i~~~-Ppl~it~~eid~~~~~l~~al~~~~ 448 (466)
T PRK07030 388 S-KTPYP--WQERRGLKVYQHALERGALL-RPL---G-SVVYFL-PPYVITPEQIDFLAEVASEGIDIAT 448 (466)
T ss_pred c-cccCc--chhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEE-CCccCCHHHHHHHHHHHHHHHHHHh
Confidence 0 00000 01122346788888888554 332 3 378986 3457789999999999999988874
No 355
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.94 E-value=5.5e-07 Score=93.43 Aligned_cols=144 Identities=13% Similarity=-0.031 Sum_probs=89.1
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhcc------------CCeEE
Q psy9807 157 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWL------------GKMLD 221 (561)
Q Consensus 157 ~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g------------~~v~~ 221 (561)
..+|++|||+||-.|+.+||.... .++++..... .+.. +..+.+ ..+..
T Consensus 83 ~v~~~~SGseA~e~Alklar~~~g---------------r~~Ii~~~~syHG~t~~-~ls~~~~~~~~~~~~p~~~~~~~ 146 (364)
T PRK04013 83 YVYMGNSGTEAVEAALKFARLYTG---------------RKEIIAMTNAFHGRTMG-ALSATWKPKYREDFEPLVPGFKH 146 (364)
T ss_pred EEEEeCchHHHHHHHHHHHHHHhC---------------CCEEEEECCccccCchh-hccCCCCcccccCCCCCCCCcEE
Confidence 368999999999999999986520 1234333332 1111 111111 11222
Q ss_pred eeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc-C---HHHHHHHHhhcCceEEechhcccccccCcc
Q psy9807 222 LPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD-C---LEEIGQVCRQKDVWLHVDAAYAGSAFICPE 297 (561)
Q Consensus 222 v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id-p---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~ 297 (561)
+| ..|++.+++.+.+ .+.+|++.......|.+- | +++|.++|++||+.++.|..+.|. -...-
T Consensus 147 ~~----~~d~~~l~~~i~~--------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~ 213 (364)
T PRK04013 147 IP----FNDVEAAKEAITK--------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKF 213 (364)
T ss_pred ec----CCCHHHHHHHhcC--------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCch
Confidence 33 2367888887754 456777766665556554 4 999999999999999999998865 33221
Q ss_pred ccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 298 NRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 298 ~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
+.....++ ..|.+++ -|.++.-+..|.++.+.
T Consensus 214 ~a~~~~gv-~PDiv~~--gK~lggG~P~~a~~~~~ 245 (364)
T PRK04013 214 LAIEHYKV-EPDIVTM--GKGIGNGVPVSLTLTNF 245 (364)
T ss_pred hHHHhcCC-CCCEEEe--cccccCCceeEEEEecc
Confidence 11111233 4687777 78887656677777654
No 356
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.94 E-value=5.6e-07 Score=96.45 Aligned_cols=319 Identities=14% Similarity=0.035 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCe-EEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGG-VIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g-~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
++.+.++.+.|.+++..... .... +|++|||+||-.|+..||.... .++++.+...
T Consensus 100 ~~~~~~lAe~L~~~~p~~~~-------~~~~~f~~~SGsEAve~AlklAr~~tg---------------r~~Ii~~~~~y 157 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPGQGK-------EYCLQFTGPSGADAVEAAIKLAKTYTG---------------RSNVISFSGGY 157 (459)
T ss_pred CHHHHHHHHHHHHhCCCccc-------cceEEEeCCCcHHHHHHHHHHHHHhcC---------------CCeEEEECCCc
Confidence 45666777778887642210 0023 4458999999999999986521 1234444333
Q ss_pred --chHHHHHHhcc------------CCeEEeeC-CCCc--------cChhhHHHHHhhhchhh----cCCceEEEEEecC
Q psy9807 206 --TELEVVMLDWL------------GKMLDLPK-EFLA--------CSGGKGGGVIQRKSDRE----MCSDLLQVVATLG 258 (561)
Q Consensus 206 --~s~~kaa~~~g------------~~v~~v~~-~~g~--------~d~~~Le~~i~~~~~~~----~g~~p~~vv~t~g 258 (561)
.+.. +..+.+ ..+..+|. +..+ -+.+.+++.+++ ... .+..+.+|++.-.
T Consensus 158 HG~t~~-als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~iAAvI~EPi 234 (459)
T PRK06931 158 HGMTHG-ALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFEN--FIEDVESGVRKPAAVILEAI 234 (459)
T ss_pred CCccHH-HHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHH--HHHhhhcCCCceEEEEEccc
Confidence 2211 111111 12344443 2111 123444444433 221 1234667777655
Q ss_pred CCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChh
Q psy9807 259 TTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPS 334 (561)
Q Consensus 259 tt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~ 334 (561)
....|.+-| ++++.++|++||+.+++|..+.|......-+..-..++ ..|.+++ -|.++.-+..|++..++.
T Consensus 235 qg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~av~~~~~- 310 (459)
T PRK06931 235 QGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAVLGIKKE- 310 (459)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEe--cccccCCcceeeeeeHHH-
Confidence 555565543 89999999999999999998876543332121111244 4788887 788876566777776542
Q ss_pred hHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC-CCe
Q psy9807 335 WVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD-DRF 410 (561)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~g~ 410 (561)
+ ..+. +.. . + .+-....+..- ++++.+..+ ...++..++.++|.+.|+++ ...
T Consensus 311 -~-~~~~--~~~--~---~-----------~T~~gnpla~aaala~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~ 367 (459)
T PRK06931 311 -F-DAWQ--PGG--H---T-----------GTFRGNQLAMATGLTTLKILKEE---NLAQNAAERGEWLKAQLAELQKRY 367 (459)
T ss_pred -H-hhcc--CCC--C---C-----------CCCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 2221 110 0 0 01112233333 344444333 35566677777777777653 111
Q ss_pred EEeccc-ccc-ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcce
Q psy9807 411 EVIYEV-LMG-LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 488 (561)
Q Consensus 411 ~l~~~~-~~~-~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v 488 (561)
.++... ..+ ++.+.+.. ++...-.
T Consensus 368 ~~i~~vrG~Glm~giel~~------------------------------------------------------~~~~~~~ 393 (459)
T PRK06931 368 PCIGNVRGRGLMIGIEIVD------------------------------------------------------ERQPADA 393 (459)
T ss_pred CCeEeEecCceEEEEEEcc------------------------------------------------------Ccccccc
Confidence 111111 111 11111110 0000000
Q ss_pred eeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 489 CFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 489 ~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
.............+...+.+.|.+. .+.. .+..++|+... ...+++||+++++++.++.+++.+
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~Gvl~-~~~~-~~~~~l~~~Pp-l~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 394 MGSYPADGELAAAIQKACFENGLLL-ERGG-RNGNVVRLLPP-LLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred cccCCccHHHHHHHHHHHHHCCcEE-eecC-CCCCEEEEECC-CCcCHHHHHHHHHHHHHHHHHHHh
Confidence 0000001133456778888888654 3322 12357998755 566889999999999998877654
No 357
>KOG1358|consensus
Probab=98.93 E-value=5e-08 Score=96.99 Aligned_cols=249 Identities=8% Similarity=-0.018 Sum_probs=150.3
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|..-...-.+|.++ ++++|.++. ++.+-|-.+...++-+ +.. .++++
T Consensus 135 YGt~DvHldlE~~i----akF~G~E~a-----------ivYs~gF~ti~S~ipa----fsK--------------rGDIi 181 (467)
T KOG1358|consen 135 YGTIDVHLDLEKRI----AKFMGTEDA-----------IVYSYGFSTIESAIPA----FSK--------------RGDII 181 (467)
T ss_pred cccceeecccHHHH----HHhhCCcce-----------eeeccccchhhhcchh----hhc--------------cCcEE
Confidence 33444455677755 888888753 6666553333222222 111 12344
Q ss_pred Eeccc--chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhc--hhhcCC---ceEEEEEecCCCCCccccCHHHHHH
Q psy9807 201 ASPAC--TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKS--DREMCS---DLLQVVATLGTTNCCAFDCLEEIGQ 273 (561)
Q Consensus 201 v~~s~--~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~--~~~~g~---~p~~vv~t~gtt~tG~idpl~eI~~ 273 (561)
++.-. ..+.++.++..-.++.+. +.|+++|++.+.+.. +.+..+ ....||+..-.-++|.+-|+.+|.+
T Consensus 182 ~~de~~nfaIq~GlqlSRS~i~~Fk----hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~ 257 (467)
T KOG1358|consen 182 FVDEAVNFAIQKGLQLSRSTISYFK----HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVK 257 (467)
T ss_pred EEehhhhHHHHHHHhhhhheeEEec----CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHH
Confidence 44333 778888887777777777 889999998885521 112121 1357888899999999999999999
Q ss_pred HHhhcCceEEechhcccccccCcccccc----ccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCcccc
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYL----MKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~----~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
+..+|...+++|..|..+.+. ...++. .-.++..|.++.+..-.|. +.|.+.+.+........-...+|.+
T Consensus 258 lk~Kyk~RvildEs~SfG~lg-~~GrGvteH~~v~~~~iDiv~~sm~~ala---s~GgFc~G~~~i~~hQrLSg~~Y~f- 332 (467)
T KOG1358|consen 258 LKNKYKFRVILDESLSFGVLG-KTGRGVTEHFGVPITDIDIVTASMETALA---SGGGFCAGKSFIADHQRLSGSGYCF- 332 (467)
T ss_pred HHhhheEEEEEeccccccccc-ccCccccccCCCCccceeeeeeccccccc---ccCceeecceeeEeeeeccccceee-
Confidence 999999999999998754432 112222 1224556999888776665 4555655543221111112223333
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeeccc
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKH 427 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~ 427 (561)
|+...++-.-++.+.+. .+.-.++++........+...++...++++.+.+.++++-.++.+
T Consensus 333 ----------------SAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~ 395 (467)
T KOG1358|consen 333 ----------------SASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLER 395 (467)
T ss_pred ----------------eccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecc
Confidence 22222222222333332 222334666677777788888888888999988888887766554
No 358
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.92 E-value=2.3e-06 Score=86.68 Aligned_cols=306 Identities=12% Similarity=0.063 Sum_probs=164.9
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHH-HHHHhh-cccc--ccccccChhhHHHHHHHHHHHHH
Q psy9807 65 TPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVA-DILSDS-IACI--GFTWIASPACTELEVVMLDWLGK 140 (561)
Q Consensus 65 ~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~l~~~-~n~~--~~~~~~sp~~~~lE~~~~~~la~ 140 (561)
.+.+-.+++.++.+....+. ..+.|.|--.-+.-.|+++- .++..- |=.. .+.-+-|...-+.--+-...+++
T Consensus 55 ~~~sE~e~l~~l~~ia~kN~---~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~d 131 (450)
T COG0403 55 KPLSEYEALAELKEIASKNK---VFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVAD 131 (450)
T ss_pred CCCCHHHHHHHHHHHHhcCc---hhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 34588899999998765543 45566553333344445444 443220 0000 00011122111112234457899
Q ss_pred hcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccchHHHH-H----Hhc
Q psy9807 141 MLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACTELEVV-M----LDW 215 (561)
Q Consensus 141 l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~s~~ka-a----~~~ 215 (561)
|.|++-. ..-+.-++|.+--.++++-|.... -..+++|..+.+.-... . .-.
T Consensus 132 LTGm~VA---------NASm~DeaTAaAEAm~ma~r~~k~--------------k~~~~~V~~~vhpqt~~Vl~Tra~~~ 188 (450)
T COG0403 132 LTGLDVA---------NASMLDEATAAAEAMLMAKRVTKK--------------KRNKFLVPKDVHPQTLDVLRTRAEGL 188 (450)
T ss_pred HhCCCcc---------cchhhhhHHHHHHHHHHHHHhhcC--------------cCceEEecCCCCHHHHHHHHhhcccC
Confidence 9999853 345566666543333333222110 01234444443222222 2 223
Q ss_pred cCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechh-ccccccc
Q psy9807 216 LGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAA-YAGSAFI 294 (561)
Q Consensus 216 g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA-~gg~~~~ 294 (561)
|.++..++.+ |.++|+.. .. . ..+.|++...++.-+.+.++.+|.+.+|++|+.+.|=+= .+.+.+-
T Consensus 189 g~~i~~~~~~----d~~~l~~~-~~--~-----~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~ 256 (450)
T COG0403 189 GIEIEVVDAD----DLDDLESA-DD--G-----DVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLK 256 (450)
T ss_pred ceEEEEeccc----hhhhhhhc-cc--c-----CeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhccC
Confidence 4566666533 77888877 33 1 456777777664433777899999999999997766432 2222222
Q ss_pred CccccccccCccccceeeecCCcccccccc-----ceeEEecChhhHHHhhccCCCccccCC--CCCCCCCCcccccC--
Q psy9807 295 CPENRYLMKGVELADSFNFNPHKWMLVTFD-----CSAMWLKDPSWVVNAFNVDPLYLKHDQ--QGSAPDYRHWQIPL-- 365 (561)
Q Consensus 295 ~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-----~g~l~~r~~~~l~~~~~~~~~yl~~~~--~~~~~~~~~~~~~~-- 365 (561)
.| |--.||.++.+.+- ||.|.+ +|++.+|+.- ....|+-|-..+ ..+.+.++ ..+|.
T Consensus 257 pP-------Ge~GADIvvG~~Qr-fGvPmgfGGPhag~fA~~~~~-----~R~mPGRlVG~S~D~~G~~A~r-LaLQTRE 322 (450)
T COG0403 257 PP-------GEFGADIVVGSAQR-FGVPMGFGGPHAGYFAVKDEF-----KRQMPGRLVGVSVDAAGKRAFR-LALQTRE 322 (450)
T ss_pred Cc-------cccCCceEEecCcc-cCCCcCCCCcceeeeeEhHhH-----hhcCCCceeeeeecCCCCchhh-hhHHHHH
Confidence 22 23367999999998 455543 7778777642 223333332211 11222221 12221
Q ss_pred --cCCcc------------hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecccccccee
Q psy9807 366 --GRRFR------------SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVIYEVLMGLVC 422 (561)
Q Consensus 366 --sr~~~------------al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~~~~~~~v~ 422 (561)
=||-. ++..-+.+-++|.+|++++.++.++++.+++++|++.. |++++.+.-...++
T Consensus 323 QHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~ 394 (450)
T COG0403 323 QHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFT 394 (450)
T ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEE
Confidence 13321 22223334567999999999999999999999999753 68877664444433
No 359
>PRK07046 aminotransferase; Validated
Probab=98.91 E-value=2.2e-06 Score=91.73 Aligned_cols=164 Identities=18% Similarity=0.070 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.|.++.+.+.++++.+ ...|++|||+||..|+..||..-. .++++.+...
T Consensus 114 ~~~~~~lAe~l~~~~~~~-----------~v~F~nSGtEA~e~AlrlAR~~TG---------------r~~ii~~~g~YH 167 (453)
T PRK07046 114 SEDAAWVGEELARRFGLP-----------YWQVATTATDANRFVLRWARAVTG---------------RPKILVFNGCYH 167 (453)
T ss_pred CHHHHHHHHHHHHHhCCC-----------EEEEECCHHHHHHHHHHHHHHhhC---------------CCEEEEECCCCC
Confidence 567778888888887643 458999999999999999987521 1234433332
Q ss_pred -ch-HHHHHHhc----------cC------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC
Q psy9807 206 -TE-LEVVMLDW----------LG------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC 267 (561)
Q Consensus 206 -~s-~~kaa~~~----------g~------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp 267 (561)
.+ ..-..... +. .+..+| ..|++.|++.+.. + ...+|++.-.....|.+-|
T Consensus 168 G~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~nd~~~l~~~l~~--~-----~vAavi~EPi~g~~G~~~p 236 (453)
T PRK07046 168 GTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE----FNDLAALEAALAD--G-----DVAAVLAEPAMTNIGMVLP 236 (453)
T ss_pred CCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC----CCCHHHHHHHhCC--C-----CeEEEEECCCCCCCCCcCC
Confidence 11 00000001 10 112222 2478899888843 2 4667777766666677765
Q ss_pred ----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecCh
Q psy9807 268 ----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDP 333 (561)
Q Consensus 268 ----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~ 333 (561)
++++.++|++||+.+++|..+. +.. .........++ ..|.+++ -|.++.=+++|++..++.
T Consensus 237 ~~~fl~~lr~lc~~~g~llI~DEV~t-fr~-g~Gg~~~~~gv-~PDi~t~--gK~lggG~Pi~av~g~~~ 301 (453)
T PRK07046 237 EPGFHEALRELTRRYGTLLVIDETHT-ISS-GPGGYTRAHGL-EPDFLVV--GKPIAGGVPCAVYGFSAE 301 (453)
T ss_pred CHHHHHHHHHHHHHhCCEEEEEcccc-Ccc-CCcchhHHhCC-Cccceee--hhhhcCCCcceeeeehHH
Confidence 8999999999999999999874 100 00000111244 4688765 898886677888887654
No 360
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.89 E-value=2.2e-06 Score=92.02 Aligned_cols=240 Identities=10% Similarity=0.004 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
++.+.++.+.|++++.-.- ....|++|||+||..|+..||.....+ +.+ ...+++.+...
T Consensus 98 ~~~~~~lae~L~~~~p~~~---------~~v~f~~SGseAve~AlklAr~~~~~~---g~t------gr~~ii~~~~~YH 159 (460)
T PRK06916 98 NVPSILLAEKLIEVVPEGL---------KKVFYSDSGATAVEIAIKMAFQYWQNK---GKP------KKQRFVTLKNAYH 159 (460)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEeCCcHHHHHHHHHHHHHHHHhc---CCC------CCcEEEEECCcCC
Confidence 3455666777777763211 146899999999999999999753211 000 01244444433
Q ss_pred -chHHHHHHhcc------------CCeEEeeC-CCC----c--------cChhhHHHHHhhhchhhcCCceEEEEEec-C
Q psy9807 206 -TELEVVMLDWL------------GKMLDLPK-EFL----A--------CSGGKGGGVIQRKSDREMCSDLLQVVATL-G 258 (561)
Q Consensus 206 -~s~~kaa~~~g------------~~v~~v~~-~~g----~--------~d~~~Le~~i~~~~~~~~g~~p~~vv~t~-g 258 (561)
.+.. +..+.+ ..+..+|. ... . -+++.+++.+++ .+..+.+|++.- .
T Consensus 160 G~t~~-als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~~~iAAvi~EP~i 233 (460)
T PRK06916 160 GDTIG-AVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE-----KHEEIAAIIVEPLV 233 (460)
T ss_pred cccHH-hHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh-----CCCcEEEEEEeccc
Confidence 2211 112221 12334433 111 1 234566666653 123566666654 2
Q ss_pred CCCCccc----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecCh
Q psy9807 259 TTNCCAF----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 259 tt~tG~i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
....|.+ +=++++.++|++||+.+++|..+.|......-+.....++ ..|.+++ -|.|+.=+ +.|++..++.
T Consensus 234 qg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~e 310 (460)
T PRK06916 234 QGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIMTA--GKGLTGGYLPIAITVTTDE 310 (460)
T ss_pred cCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCeeee--ehhhhcCccccceeeecHH
Confidence 4444544 3588999999999999999999876433332111111234 4688765 78877553 5777777653
Q ss_pred hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 334 SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
.. ..+.. .+... . .+. ...+-....+..-+++..+..-.-+.++++..++.++|.+.|+++
T Consensus 311 -i~-~~~~~--~~~~~---~---~~~---~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l 371 (460)
T PRK06916 311 -IY-NAFYG--DYEEQ---K---TFF---HGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDL 371 (460)
T ss_pred -HH-HHhhc--ccccc---C---ccc---cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh
Confidence 22 22211 11000 0 000 001111233333333333322112345677888888999988865
No 361
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.89 E-value=8.3e-07 Score=94.55 Aligned_cols=69 Identities=20% Similarity=0.234 Sum_probs=47.5
Q ss_pred CceEEEEEecCCCCCccc----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccc
Q psy9807 248 SDLLQVVATLGTTNCCAF----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWM 319 (561)
Q Consensus 248 ~~p~~vv~t~gtt~tG~i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l 319 (561)
..+.+|++.-.....|.+ +.+++|.++|++||+.+++|..+.|......-+.....++ ..|.+++ .|.+
T Consensus 217 ~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv-~PDi~~~--gK~~ 289 (431)
T TIGR03251 217 HDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-QPDIVAF--GKKT 289 (431)
T ss_pred CcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCC-CCCEEEe--cccC
Confidence 367788887766666765 5899999999999999999999886543321111111233 4788876 5554
No 362
>PLN02397 aspartate transaminase
Probab=98.88 E-value=1.3e-06 Score=92.89 Aligned_cols=126 Identities=10% Similarity=-0.071 Sum_probs=82.5
Q ss_pred ceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHH
Q psy9807 198 NLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEE 270 (561)
Q Consensus 198 ~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~e 270 (561)
.+++.... ......+...|++++.+|. +++.+|++.+++.+.+ . ..++++++.....+.||.+- .+++
T Consensus 144 ~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~--~---~~~~~~i~~~~P~NPTG~v~s~e~l~~ 218 (423)
T PLN02397 144 TIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKA--A---PDGSFVLLHACAHNPTGVDPTPEQWEQ 218 (423)
T ss_pred EEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHh--C---CCCCEEEEeCCCCCCCCCCCCHHHHHH
Confidence 44444444 4445556888999999987 3478999999988864 2 11456777777888889884 5667
Q ss_pred HHHHHhhcCceEEechhcccccccCc---ccccc--ccCccccceeeecCCcccccc-ccceeEE
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICP---ENRYL--MKGVELADSFNFNPHKWMLVT-FDCSAMW 329 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~---~~~~~--~~gi~~aDsi~~~~HK~l~~P-~g~g~l~ 329 (561)
|+++|++||+|+++|.+|.... +.+ ..... +.....-=.+..++.|.++.| .=+|.+.
T Consensus 219 i~~~a~~~~~~vI~De~Y~~l~-~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 219 ISDLIKSKNHLPFFDSAYQGFA-SGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALS 282 (423)
T ss_pred HHHHHHhCCcEEEEecccCCcc-CCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEE
Confidence 7889999999999999998543 211 01111 111100014566999999855 3367664
No 363
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.88 E-value=1.3e-06 Score=93.21 Aligned_cols=222 Identities=14% Similarity=0.150 Sum_probs=120.7
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCcc
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE 306 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~ 306 (561)
++.+++.+.+ .+..+.+|++.-.....|.+ +.+++|.++|++||+.+++|..+.|......-+..-..++
T Consensus 212 ~~~~~~~i~~-----~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv- 285 (443)
T PRK08297 212 LAQARAAFER-----HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV- 285 (443)
T ss_pred HHHHHHHHHh-----CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-
Confidence 3445555543 23467788887666666766 7899999999999999999999876533221111111233
Q ss_pred ccceeeecCCccccccccceeEEecCh-hhHH-HhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHH
Q psy9807 307 LADSFNFNPHKWMLVTFDCSAMWLKDP-SWVV-NAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVK 384 (561)
Q Consensus 307 ~aDsi~~~~HK~l~~P~g~g~l~~r~~-~~l~-~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~ 384 (561)
..|.+++ .|.+ | .|.+++++. ..+. ..+.. ..+. ..+-....+..-+++..+..-
T Consensus 286 ~PDiv~~--gK~l--~--~~a~l~~~~i~~~~~~~~~~-~~~~----------------~~T~~gnpl~~aaa~a~L~~l 342 (443)
T PRK08297 286 RPDIVAF--GKKT--Q--VCGIMAGRRVDEVEDNVFAV-SSRI----------------NSTWGGNLVDMVRARRILEVI 342 (443)
T ss_pred CCCEEEe--cccc--c--ccceecchHHHHhhhhhccC-cccc----------------CCCCCccHHHHHHHHHHHHHH
Confidence 4788875 7876 3 344444432 1111 11110 0000 011112333333333333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-CeEEec-c-ccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHH
Q psy9807 385 YLQEYIRKQISLAKEFEQLVRSDD-RFEVIY-E-VLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQI 461 (561)
Q Consensus 385 g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~-~-~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~ 461 (561)
.-++++++..++.++|.+.|+++. .+..+. . ...+.+
T Consensus 343 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~---------------------------------------- 382 (443)
T PRK08297 343 EEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLM---------------------------------------- 382 (443)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceE----------------------------------------
Confidence 223566777778888888877531 111100 0 001111
Q ss_pred HHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHH
Q psy9807 462 SLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIY 541 (561)
Q Consensus 462 ~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~ 541 (561)
+.+.+. .......+.+.+.+.|.++ .+ .+...+|++.. ...+++|+++
T Consensus 383 --------------------------~~i~~~-~~~~~~~~~~~l~~~Gvl~-~~---~~~~~lr~~P~-l~~t~~eid~ 430 (443)
T PRK08297 383 --------------------------CAFDLP-TTADRDEVIRRLWEEGVLV-LP---CGERSIRFRPA-LTVTTEEIDA 430 (443)
T ss_pred --------------------------EEEEec-CHHHHHHHHHHHHHCCEEE-ec---CCCCeEEEECC-ccCCHHHHHH
Confidence 111111 1233457788888888554 32 23357899755 5568899999
Q ss_pred HHHHHHHHHHHH
Q psy9807 542 SWNEIKTLTEEL 553 (561)
Q Consensus 542 l~~~l~~~~~~~ 553 (561)
+++++.++.+++
T Consensus 431 ~l~~l~~~l~~~ 442 (443)
T PRK08297 431 AIDALRRALPEV 442 (443)
T ss_pred HHHHHHHHHHhh
Confidence 999999887653
No 364
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.87 E-value=4.4e-06 Score=89.69 Aligned_cols=174 Identities=13% Similarity=-0.000 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+.+.++.+.|.+++.-+.. ....|++|||+||..|+..||..-. ..+++.....
T Consensus 97 ~~~~~la~~L~~~~p~~~~--------~~v~f~~sGseA~e~AlklAr~~tg---------------r~~ii~~~~~yHG 153 (451)
T PRK06918 97 EPYIELAEKLAALAPGSFD--------KKVLFLNSGAEAVENAVKIARKYTK---------------RQGIISFSRGFHG 153 (451)
T ss_pred HHHHHHHHHHHHhCCCCCC--------CEEEEcCCcHHHHHHHHHHHHHHhC---------------CCcEEEECCCcCc
Confidence 4556667777777642210 1468999999999999999986521 1234443322
Q ss_pred chHHHHHHhcc-------------CCeEEeeC-CCC----ccC--------hhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 206 TELEVVMLDWL-------------GKMLDLPK-EFL----ACS--------GGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 206 ~s~~kaa~~~g-------------~~v~~v~~-~~g----~~d--------~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
.+.. +..+.+ ..+..+|. ... .+. .+.+++.+.. .. .+..+.+|++.-..
T Consensus 154 ~t~~-~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~iAavi~EPi~ 229 (451)
T PRK06918 154 RTLM-TMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFIS--EV-APETIAAVVMEPVQ 229 (451)
T ss_pred cchh-hhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHh--hc-CCCceEEEEECccc
Confidence 1111 111111 12333433 111 111 1223333321 11 12356666665555
Q ss_pred CCCcccc----CHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 260 TNCCAFD----CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 260 t~tG~id----pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
...|.+- -+++|.++|++||++++.|..+.+.......+....-++ ..|.+ ++.|.++.-+..|.++.++
T Consensus 230 g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~--t~sK~l~~G~pig~v~~~~ 303 (451)
T PRK06918 230 GEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLI--TVSKSLGAGVPISGVIGRK 303 (451)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEE--eeehhhcCCCccEEEEEcH
Confidence 4445543 388999999999999999999876533221111000122 25744 5789998656678888753
No 365
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.86 E-value=2.4e-06 Score=90.70 Aligned_cols=174 Identities=16% Similarity=0.071 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.++++.+-+- ....|++|||+||-.|+..||.....+ +.+ ...+++.....
T Consensus 83 ~~~~~lae~L~~~~p~~~---------~~v~f~~SGseA~e~AlklAr~~~~~~---g~~------~r~~ii~~~~~yHG 144 (422)
T PRK05630 83 EPAIKLTRKLLNLTDNGL---------DHVFYSDSGSVSVEVAIKMALQYSKGQ---GHP------ERTRLLTWRSGYHG 144 (422)
T ss_pred HHHHHHHHHHHhhCCCCc---------CEEEEeCCcHHHHHHHHHHHHHHHHhc---CCC------CCcEEEEECCCcCC
Confidence 344556666677653211 146899999999999999998763211 000 01234444333
Q ss_pred chHHHHHHhcc-------------CCeEEeeC-CCCccChh-------hHHHHHhhhchhhcCCceEEEEEecC-CCCCc
Q psy9807 206 TELEVVMLDWL-------------GKMLDLPK-EFLACSGG-------KGGGVIQRKSDREMCSDLLQVVATLG-TTNCC 263 (561)
Q Consensus 206 ~s~~kaa~~~g-------------~~v~~v~~-~~g~~d~~-------~Le~~i~~~~~~~~g~~p~~vv~t~g-tt~tG 263 (561)
.+.. +..+.+ ..+..+|. .....+.+ .+++.+.+ ...+|++.-. ....|
T Consensus 145 ~t~~-als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------~iAAvi~EPi~qg~gG 215 (422)
T PRK05630 145 DTFA-AMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE--------TVAAIIIEPIVQGAGG 215 (422)
T ss_pred ccHH-HhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh--------ceEEEEEechhcCcCC
Confidence 1111 111111 12334443 11111222 23333322 4555555432 22333
Q ss_pred c----ccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecC
Q psy9807 264 A----FDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKD 332 (561)
Q Consensus 264 ~----idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~ 332 (561)
. .+.+++|.++|++||+.+++|.++.|......-+..-..++ ..|.+++ -|.++.= +..|+++.++
T Consensus 216 ~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~ 286 (422)
T PRK05630 216 MRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALTGGFMSFAATLCTD 286 (422)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhhcCccccceeeccH
Confidence 3 35899999999999999999999866432221111111233 4687754 8998542 2345555544
No 366
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.84 E-value=7.3e-06 Score=88.03 Aligned_cols=183 Identities=14% Similarity=0.031 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.|.+++.-... ..+-....|++|||+||-.|+..||.....+ +. + ...+++.....
T Consensus 107 ~~~~~lae~L~~~~p~~~~----~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~-g~--~------~r~~ii~~~~syHG 173 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDG----RAPLSKVFYADNGSAGVEVALKMAFHYFHNR-GE--H------RRTRFIALENGYHG 173 (472)
T ss_pred HHHHHHHHHHHHhCCCccc----CCCCCEEEEeCCchHHHHHHHHHHHHHHHhc-CC--C------CCcEEEEECCCcCC
Confidence 3445666777777632100 0000246899999999999999999764321 00 0 01234433332
Q ss_pred chHHHHHHhcc------------CCeEEeeC-CCCc------------cChhhHHHHHhhhchhhcCCceEEEEEec-CC
Q psy9807 206 TELEVVMLDWL------------GKMLDLPK-EFLA------------CSGGKGGGVIQRKSDREMCSDLLQVVATL-GT 259 (561)
Q Consensus 206 ~s~~kaa~~~g------------~~v~~v~~-~~g~------------~d~~~Le~~i~~~~~~~~g~~p~~vv~t~-gt 259 (561)
.+.. +..+.+ ..+..+|. +..+ -+++.+++.++. .+..+.+|++.- ..
T Consensus 174 ~t~g-als~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~iAAvI~EPviq 247 (472)
T PRK08742 174 ETIG-ALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ-----SPGEICALILEPRLQ 247 (472)
T ss_pred Cchh-hhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh-----CCCceEEEEEccccc
Confidence 2211 111111 12344443 2111 124566666643 122556666654 23
Q ss_pred CCCccc----cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecCh
Q psy9807 260 TNCCAF----DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 260 t~tG~i----dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
...|.+ +=++++.++|++||+.+++|..+.|......-+.....|+ ..|.+++ -|.|+.=+ ..|+++.++.
T Consensus 248 g~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~--gKgl~gG~~Plaav~~~~e 323 (472)
T PRK08742 248 CAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCL--SKGLTGGFLPLSAVLATQQ 323 (472)
T ss_pred cCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEE--cccccCCCCCcceeeccHH
Confidence 344543 4588999999999999999998776544332221112244 4798888 78887543 5677777543
No 367
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.81 E-value=1.4e-06 Score=92.92 Aligned_cols=171 Identities=15% Similarity=0.023 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
...+.++.+.|.+++... ....|++|||+||..|+..||..-. ..+++.....
T Consensus 87 ~~~~~~la~~l~~~~p~~----------~~v~f~~sGseA~e~AlklAr~~tg---------------r~~i~~~~~~~~ 141 (431)
T PRK06209 87 SAIELDAAESFLELIDGA----------DMVKFCKNGSDATSAAVRLARAYTG---------------RDLVARCADHPF 141 (431)
T ss_pred CHHHHHHHHHHHHhCCcc----------ceEEEecCHHHHHHHHHHHHHHHhC---------------CCeEEEeccCcc
Confidence 345556777788876321 1468999999999999999987621 0122222011
Q ss_pred chHHHH---H-Hh-ccCC--eEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 206 TELEVV---M-LD-WLGK--MLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 206 ~s~~ka---a-~~-~g~~--v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
...... . .. .+.. +...+......|+++|++.|++ . +..+.+|++.....+.+..+++++|.++|++|
T Consensus 142 h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~ 216 (431)
T PRK06209 142 FSTDDWFIGTTPMSAGIPASVSALTVTFRYNDIASLEALFED--H---PGRIACVILEPATADEPQDGFLHEVRRLCHEN 216 (431)
T ss_pred ccccccccccCCCCCCCChhHhccccccCCCCHHHHHHHHHh--C---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHc
Confidence 110000 0 00 0110 0001111124589999999865 2 12455666655554455556699999999999
Q ss_pred CceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
|+.+++|.++.|.... ........++ ..|.++ ..|.++.-+..|++..++
T Consensus 217 g~lLI~DEv~tG~~~~-~~g~~~~~gv-~PDi~t--~gK~lggG~p~~av~~~~ 266 (431)
T PRK06209 217 GALFILDEMITGFRWH-MRGAQKLYGI-VPDLSC--FGKALGNGFAVSALAGKR 266 (431)
T ss_pred CCEEEEEcccccCCcC-cchhhHHhCC-Ccceee--ehhhhcCCcccEEEEEHH
Confidence 9999999998654321 1000001133 357654 589988644566666643
No 368
>PLN02590 probable tyrosine decarboxylase
Probab=98.80 E-value=6.9e-09 Score=111.97 Aligned_cols=88 Identities=43% Similarity=0.768 Sum_probs=76.5
Q ss_pred eeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCc---HH
Q psy9807 422 CFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPN---EI 498 (561)
Q Consensus 422 ~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~---~~ 498 (561)
.+++.+|+++.+||++++|+|+.++.+|.++++++|++.+++|++|+++|+++|.||++.+|.+++||||+.+.. +.
T Consensus 395 ~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~ 474 (539)
T PLN02590 395 VVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQ 474 (539)
T ss_pred CCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHH
Confidence 356788999999999999999999999999999999999999999999999999999999999999999997632 22
Q ss_pred HHHHHHHHHhC
Q psy9807 499 NEKLLKRINGN 509 (561)
Q Consensus 499 ~~~l~~~L~~~ 509 (561)
..++-.+|.+.
T Consensus 475 ~~~ln~~l~~~ 485 (539)
T PLN02590 475 CNERNRELLAA 485 (539)
T ss_pred HHHHHHHHHHH
Confidence 34455556554
No 369
>KOG1404|consensus
Probab=98.79 E-value=4.6e-06 Score=83.43 Aligned_cols=211 Identities=13% Similarity=0.063 Sum_probs=123.0
Q ss_pred eEEEEEecCCCCCcccc----CHHHHHHHHhhcCceEEechhcccccccCccccccccCcc----ccceeeecCCccccc
Q psy9807 250 LLQVVATLGTTNCCAFD----CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE----LADSFNFNPHKWMLV 321 (561)
Q Consensus 250 p~~vv~t~gtt~tG~id----pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~----~aDsi~~~~HK~l~~ 321 (561)
+.+.++.......|.+. -|++..++|+++|..++.|.++.|..... . +.|.+ ..|.++. .|.++.
T Consensus 213 vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~----~wgfe~h~v~PDIvTm--AKgiGn 285 (442)
T KOG1404|consen 213 VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-H----MWGFESHGVVPDIVTM--AKGIGN 285 (442)
T ss_pred eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-c----cccccccCCCccHHHH--HhhccC
Confidence 55566665555568776 48899999999999999999988766544 1 12222 2466554 688887
Q ss_pred cccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy9807 322 TFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFE 401 (561)
Q Consensus 322 P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~ 401 (561)
-...|.+++.+. +...+.....|.+.-. ...++....+..+....-+++.++..+...||.
T Consensus 286 G~Pl~AVvtt~E--Ia~v~~~~~~~fnTyg-----------------gnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~ 346 (442)
T KOG1404|consen 286 GFPLGAVVTTPE--IADVLNQKSSHFNTYG-----------------GNPVACAVGLAVLKVIKEENLQENAAEVGSYLL 346 (442)
T ss_pred CCcceeeecCHH--HHHHHHhccccccccC-----------------CCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 788888888653 3344443332322111 112222222333333334566788888999999
Q ss_pred HHHhcC-CCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhh
Q psy9807 402 QLVRSD-DRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 480 (561)
Q Consensus 402 ~~l~~~-~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~ 480 (561)
+.|.+. .+.+++.+.... .+-.+ .|++
T Consensus 347 ~~l~~l~d~h~iIGdVRG~---------GLm~G-------------------------------------------vE~V 374 (442)
T KOG1404|consen 347 EKLAALKDKHPIIGDVRGR---------GLMLG-------------------------------------------VELV 374 (442)
T ss_pred HHHHHHhhcCCceeecccc---------eeEEE-------------------------------------------EEEe
Confidence 999874 345565543221 11111 0111
Q ss_pred hhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHH
Q psy9807 481 YEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEI 546 (561)
Q Consensus 481 ~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 546 (561)
.... -++ ++.......+-+.+.+.|. .+....+.|. ++|++.. .-.|.+|||.+++..
T Consensus 375 ~dk~---~~~--pp~~~~~~~i~~~cke~Gv-lvg~g~i~G~-vfriaPP-lciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 375 SDKS---EPK--PPATAEGAVIGEQCKELGV-LVGKGGIHGN-VFRIAPP-LCITKEDIDFAVEYF 432 (442)
T ss_pred cccC---CCC--CcchHHHHHHHHHHHHhCe-eeecccccce-EEEecCC-eeccHHHHHHHHHHH
Confidence 1000 001 1233445567788888874 4465566676 9999854 456888997776654
No 370
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.79 E-value=1.1e-06 Score=87.49 Aligned_cols=335 Identities=16% Similarity=0.090 Sum_probs=183.0
Q ss_pred ccccccCCCCC-ChHHHHHHHHHhhccccc---cccc---cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeC
Q psy9807 90 PKFHAYFPTAN-SYPAIVADILSDSIACIG---FTWI---ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQG 162 (561)
Q Consensus 90 p~~~~~~~~~~-~~~~~~~~~l~~~~n~~~---~~~~---~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ 162 (561)
|+-++|-.+|. .+++++-..-....|-++ ...+ .+.....+-.++.+-++++++.|+++ .-+++.+
T Consensus 4 ~~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y-------~VlflqG 76 (365)
T COG1932 4 PRVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDY-------KVLFLQG 76 (365)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCc-------eEEEEcC
Confidence 44444554443 355665544443333333 3333 34556677778899999999999985 2344556
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec--ccchHHHHHHhcc-CCeEEeeC---CCCc-cChhhHH
Q psy9807 163 TASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP--ACTELEVVMLDWL-GKMLDLPK---EFLA-CSGGKGG 235 (561)
Q Consensus 163 ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~--s~~s~~kaa~~~g-~~v~~v~~---~~g~-~d~~~Le 235 (561)
|+|...-++.+...... ..+.+... +..+...|-.++. ..+..... +.+. .+++..+
T Consensus 77 Gat~qf~~~p~nLl~~~----------------~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~ 140 (365)
T COG1932 77 GATGQFAMAPMNLLGKR----------------GTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD 140 (365)
T ss_pred ccHHHHHHHHHhhhccc----------------CceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc
Confidence 66655444433321110 00011111 1144444444443 33332222 2222 2333222
Q ss_pred HHHhhhchhhcCCceEEEEEecCCCCCccccC-HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeec
Q psy9807 236 GVIQRKSDREMCSDLLQVVATLGTTNCCAFDC-LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFN 314 (561)
Q Consensus 236 ~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp-l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~ 314 (561)
+.+ .-..|+.+...|.+|.--| ...+. . +..+.+|++-+......| +.+-|.|.++
T Consensus 141 --~~~--------~~ayv~~~~NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~ilsr~iD--------vsk~dviyag 197 (365)
T COG1932 141 --FSD--------NDAYVHFCWNETISGVEVPELPDIG---S--DGLLVADASSAILSRPID--------VSKYDVIYAG 197 (365)
T ss_pred --cCC--------CccEEEEecCCcccceEccCCCCCC---C--CceEEEecccHHhcCCCC--------hhHcceEEEe
Confidence 222 1235899999999996543 22222 1 178999987553322222 3445999999
Q ss_pred CCccccccccceeEEecChhhHHHhhcc-CC---CccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHh-hHHHH
Q psy9807 315 PHKWMLVTFDCSAMWLKDPSWVVNAFNV-DP---LYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLL-GVKYL 386 (561)
Q Consensus 315 ~HK~l~~P~g~g~l~~r~~~~l~~~~~~-~~---~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~-g~~g~ 386 (561)
.+|.++ |-|.+++++|+.. +.+.-+. .| .|......+.+.+ +- ..+.++ ..++++ ..-|+
T Consensus 198 aQKnlG-paGltvvIvr~~~-l~r~~~~~~P~if~y~~~~~~~s~yN--------TP--ptfa~y~~~lv~~Wlk~~GGl 265 (365)
T COG1932 198 AQKNLG-PAGLTVVIVRPDL-LERAESYTLPSIFDYLTHADNGSMYN--------TP--PTFAWYLLGLVFKWLKSQGGL 265 (365)
T ss_pred hhhccC-ccceEEEEEcHHH-HhcccccCCchHhhchhhhccCCccC--------Cc--HHHHHHHHHHHHHHHHHcCCH
Confidence 999997 7779999997753 3322111 11 2222111111111 11 122222 334444 34578
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEE-eccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHH
Q psy9807 387 QEYIRKQISLAKEFEQLVRSDDRFEV-IYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAK 465 (561)
Q Consensus 387 ~~~~~~~~~la~~l~~~l~~~~g~~l-~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~ 465 (561)
+++.++..+.++.|.+.+.+. +|.. ...+..
T Consensus 266 ~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~----------------------------------------------- 297 (365)
T COG1932 266 EALEARNQAKAQLLYDWIDKS-DFYRNLVAKAN----------------------------------------------- 297 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-Cccccccchhh-----------------------------------------------
Confidence 889999999999999999987 4422 111110
Q ss_pred HHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHH
Q psy9807 466 EFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNE 545 (561)
Q Consensus 466 ~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~ 545 (561)
...-.|||... ..+++..+.+.+.+.|.+...+-. -.+-+|+++.| ....++++.|++-
T Consensus 298 -----------------RS~mnV~f~~~-~~~ld~~fv~eae~~gl~~lkGhr--~vgGmRasiyn-A~~~e~veaL~~f 356 (365)
T COG1932 298 -----------------RSRMNVTFTLV-DAELDKGFVAEAEAAGLIYLKGHR--SVGGLRASIYN-AVPLEDVEALTDF 356 (365)
T ss_pred -----------------ccceeEEEEcC-cHHHHHHHHHHHHHcCCceecccc--CCCceeeeeec-CCCHHHHHHHHHH
Confidence 01112566554 467788889999888877765522 22349999776 4477899999998
Q ss_pred HHHHHH
Q psy9807 546 IKTLTE 551 (561)
Q Consensus 546 l~~~~~ 551 (561)
+++..+
T Consensus 357 m~~f~~ 362 (365)
T COG1932 357 MDWFEE 362 (365)
T ss_pred HHHHHH
Confidence 887654
No 371
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.74 E-value=1e-05 Score=78.19 Aligned_cols=196 Identities=10% Similarity=-0.008 Sum_probs=109.2
Q ss_pred HHHHHHhh-ccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 106 VADILSDS-IACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 106 ~~~~l~~~-~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
.++++++. +-.+...|.....-+.+-+.+...+.+.+||.-+. ....+|.|+..+-++..-. +..+
T Consensus 54 ~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~-------~NIalTnGSQs~fFYlfNl----F~G~-- 120 (417)
T COG3977 54 LAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA-------QNIALTNGSQSAFFYLFNL----FAGR-- 120 (417)
T ss_pred HHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc-------ceeeecCCccchHHHHHHH----hcCc--
Confidence 45555543 33344556666666788889999999999997541 2456666654444443221 1111
Q ss_pred hcCCCCCCcccccceEEeccc-ch-HHHHHHh------ccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEE
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TE-LEVVMLD------WLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVV 254 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s-~~kaa~~------~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv 254 (561)
...|..++++..-+- |- -..++.. ..-++..+|. -.++.|.++|+- .+ .+-+||
T Consensus 121 ------~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i--~e--------~~g~ic 184 (417)
T COG3977 121 ------RSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI--GE--------STGAIC 184 (417)
T ss_pred ------cCCCcceeEeeccChhhccccccccCccceeeccCCcccccccceeeccCHHHccc--cc--------ccceEE
Confidence 111112233332222 11 0001000 0112222333 245788887753 23 355799
Q ss_pred EecCCCCCccc---cCHHHHHHHHhhcCceEEechhcccccc---cCccccccccCccccceeeecCCccccccc-ccee
Q psy9807 255 ATLGTTNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAF---ICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSA 327 (561)
Q Consensus 255 ~t~gtt~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~---~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~ 327 (561)
++-.|+.||.+ +.+.+|.++|++||+.+.+|-|||-.+- +++-....-+. -..++|.+|.. .|. -||+
T Consensus 185 ~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~N----iilC~SLSK~G-LPG~R~GI 259 (417)
T COG3977 185 VSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNEN----IILCMSLSKLG-LPGSRCGI 259 (417)
T ss_pred ecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCC----EEEEeehhhcC-CCCcceeE
Confidence 99999999988 5788888999999999999999985321 22211110111 36789999955 454 4666
Q ss_pred EEecChhhH
Q psy9807 328 MWLKDPSWV 336 (561)
Q Consensus 328 l~~r~~~~l 336 (561)
+.. +...+
T Consensus 260 iIa-ne~vi 267 (417)
T COG3977 260 IIA-NEKVI 267 (417)
T ss_pred EEc-cHHHH
Confidence 554 55444
No 372
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.67 E-value=2.3e-05 Score=81.72 Aligned_cols=302 Identities=14% Similarity=0.091 Sum_probs=156.0
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhc-------------cCCeE
Q psy9807 157 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDW-------------LGKML 220 (561)
Q Consensus 157 ~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~-------------g~~v~ 220 (561)
..+|++|||+||-+|+..|++....+ +.|. ..+++..... .++ -++.++ ...+.
T Consensus 107 ~vFf~~sGSeAvEtAlKma~qY~~~~---G~p~------r~~~Isr~~gYHG~T~-ga~Sv~g~~~~~~~~~~~ll~~~~ 176 (449)
T COG0161 107 HVFFTDSGSEAVETALKMALQYWRAR---GQPQ------RKKFISRRNGYHGDTL-GAMSVGGPVALRHAFYDPLLPEVL 176 (449)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHHhc---CCCc------ceEEEEeccCcCcccc-hheeccCchhhhhhhccccccCce
Confidence 56899999999999999999876433 1110 1112221111 111 111111 12344
Q ss_pred EeeC-C---C---Cc------cChhhHHHHHhhhchhhcC-CceEEEEEecCCCC-Ccccc----CHHHHHHHHhhcCce
Q psy9807 221 DLPK-E---F---LA------CSGGKGGGVIQRKSDREMC-SDLLQVVATLGTTN-CCAFD----CLEEIGQVCRQKDVW 281 (561)
Q Consensus 221 ~v~~-~---~---g~------~d~~~Le~~i~~~~~~~~g-~~p~~vv~t~gtt~-tG~id----pl~eI~~ia~~~~~~ 281 (561)
.+|. . . +. -..+.||+.|.+ .| ....++++.-.--. .|.+- -++++.++|++||+.
T Consensus 177 ~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~-----~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~IL 251 (449)
T COG0161 177 HLPAPYAYRRGFFGEGDEEFAEAADELEALILE-----HGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGIL 251 (449)
T ss_pred ecCCCcccccCCCCCChHHHHHHHHHHHHHHHh-----cCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcE
Confidence 4544 1 1 11 224566666655 33 35555555433333 45554 489999999999999
Q ss_pred EEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCc
Q psy9807 282 LHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRH 360 (561)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (561)
|+.|..-.|+.....-+..--.++ ..|.+++ .|.|..- .+.|.++++++ +-+++.... ...
T Consensus 252 lI~DEV~tGFGRTG~~FA~e~~gi-~PDi~~~--aKGLT~GY~Pl~a~l~~~~--I~~~~~~~~-------------~~~ 313 (449)
T COG0161 252 LIADEVATGFGRTGKMFACEHAGI-VPDILCL--AKGLTGGYLPLSAVLTSDR--IYEAFSDGD-------------AGA 313 (449)
T ss_pred EEeecceeCCCcCchhhhhhhcCC-CCCeeee--cccccccchhhHhHhhhHH--HHHHHhccc-------------CCe
Confidence 999987555433222111111122 3477766 5777532 23455555543 223332211 001
Q ss_pred ccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeccc-cccce-eeecccCccccccccc
Q psy9807 361 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS-DDRFEVIYEV-LMGLV-CFRLKHWQIPLGRRFR 437 (561)
Q Consensus 361 ~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~g~~l~~~~-~~~~v-~f~~~~~~~~~~~~~~ 437 (561)
+....+.....++..++++.+..-.-+.++++..++..+|.+.|++ .++...+.+. ..+.+ .+.+.
T Consensus 314 f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv----------- 382 (449)
T COG0161 314 FMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELV----------- 382 (449)
T ss_pred eccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEe-----------
Confidence 1111222234444444444444333344566667889999999987 4433344332 12221 11111
Q ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee
Q psy9807 438 SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS 517 (561)
Q Consensus 438 ~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~ 517 (561)
.+.... ..| .......+.+...++|.+. -+.
T Consensus 383 -------------------------------------------~d~~t~-~~f----~~~~~~~~~~~~~e~Gl~i-Rp~ 413 (449)
T COG0161 383 -------------------------------------------ADKATK-TPF----EARVGARVRAAALERGLLI-RPL 413 (449)
T ss_pred -------------------------------------------cccccc-cch----hhhHHHHHHHHHHHCCeEE-eec
Confidence 000000 011 1234567788888988543 333
Q ss_pred eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 518 KIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 518 ~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
|. .+=++ .-+-.|+++|+++++++.+..++..++
T Consensus 414 ---g~-~i~~~-PPliit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 414 ---GD-VIYLM-PPLIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred ---CC-EEEEc-CCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 32 44454 334678899999999999988876543
No 373
>KOG3846|consensus
Probab=98.64 E-value=2.9e-06 Score=81.95 Aligned_cols=331 Identities=14% Similarity=0.099 Sum_probs=201.6
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
..+-+...++.+.|..+. . +-..++-..|+-.++..-.+-.+. +.+ +.-+--.+.|+ |.+
T Consensus 112 ~De~il~l~~~iVGA~e~---------E-vavmNsLTvNlh~Ll~sFyKPTek---R~K------ILlE~kaFPSDhYAi 172 (465)
T KOG3846|consen 112 IDEPILPLLAPIVGAQEN---------E-VAVMNSLTVNLHSLLISFYKPTEK---RFK------ILLEKKAFPSDHYAI 172 (465)
T ss_pred cchhhhhhhhhhccCCch---------h-hhhHhhhhhHHHHHHHHhcCCcch---hhh------hhhccCCCCchHHHH
Confidence 455667778888888764 2 222233445665555421110000 000 01112356777 999
Q ss_pred HHHHHhccCC----eEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceE
Q psy9807 209 EVVMLDWLGK----MLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWL 282 (561)
Q Consensus 209 ~kaa~~~g~~----v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~l 282 (561)
+.-+++.|.. ++.+.. ....+..+++-..|++ +|....+|+.+.....||..-++.+|..--+..|+++
T Consensus 173 esQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEk-----ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~V 247 (465)
T KOG3846|consen 173 ESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEK-----NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLV 247 (465)
T ss_pred HhhhhhcCCChHHheEEecccccccchhHHHHHHHHHh-----cCCeEEEEEeecceeecccccchhhhhhcccCCCcEe
Confidence 9889988863 566766 4557788888887876 5667788999999999999999999997667789999
Q ss_pred EechhcccccccCccccccccCccccceeeecCCccccc-cccceeEEecChhhHHHhhccCCCccccCCC-----CCCC
Q psy9807 283 HVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV-TFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQ-----GSAP 356 (561)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~-P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~-----~~~~ 356 (561)
--|-||+.+-+..--+ -.|+ |+-+|+..|.+++ |.|.|.+++-.+.. ........+|..++.. ....
T Consensus 248 GfDLAHAvgNVpL~LH---dWgV---DFACWCSYKYlnaGaGgIgGlFvHekh~-~~~~prl~GWwgh~~s~RF~Mdnvl 320 (465)
T KOG3846|consen 248 GFDLAHAVGNVPLQLH---DWGV---DFACWCSYKYLNAGAGGIGGLFVHEKHT-KESLPRLAGWWGHDPSKRFQMDNVL 320 (465)
T ss_pred chhhhhhhcCCceEEe---ecCC---ceEEEeeecccccCCCccceeeeehhhh-cchhhHHhhhccCCcchhhhhcccc
Confidence 9999988543322111 1244 9999999999984 67788888854421 1222222334322210 0000
Q ss_pred --CCCcccccCcCC--cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-ec--cccccceeeec-ccC
Q psy9807 357 --DYRHWQIPLGRR--FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV-IY--EVLMGLVCFRL-KHW 428 (561)
Q Consensus 357 --~~~~~~~~~sr~--~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l-~~--~~~~~~v~f~~-~~~ 428 (561)
..+-.+...|-+ ....++-.+++.+..-.+.+..++..-++.|+...++..-|.+- .. ....++++-.. ...
T Consensus 321 ~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~er 400 (465)
T KOG3846|consen 321 ELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDER 400 (465)
T ss_pred ccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccc
Confidence 011111111111 23456677888888888999999999999999999886534321 00 01111111000 000
Q ss_pred ccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHh
Q psy9807 429 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRING 508 (561)
Q Consensus 429 ~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~ 508 (561)
+++++ +.|..+ +..+.+.|..
T Consensus 401 GcQLs------------------------------------------------------l~Fssp-----~~~vfqeL~k 421 (465)
T KOG3846|consen 401 GCQLS------------------------------------------------------LYFSSP-----TPKVFQELHK 421 (465)
T ss_pred cceEE------------------------------------------------------EEeCCC-----chHHHHHHHH
Confidence 11111 223221 3567888888
Q ss_pred CCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 509 NGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 509 ~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
+|.+. .-+...++|+.....+++-.||-.+++++.++...++
T Consensus 422 rGv~~----DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 422 RGVIG----DKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred cCeec----cccCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 88553 2345668999988888899999999999999887654
No 374
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.61 E-value=3.7e-05 Score=86.86 Aligned_cols=291 Identities=10% Similarity=0.021 Sum_probs=149.0
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHH-HHHH------HhhccccccccccChhhHHHHHH
Q psy9807 61 TAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIV-ADIL------SDSIACIGFTWIASPACTELEVV 133 (561)
Q Consensus 61 ~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~l------~~~~n~~~~~~~~sp~~~~lE~~ 133 (561)
.+|+ +.+-.++++.+.+.-..+-. ...|.|--.-..-.|+++ -.++ +++ ..+.-+.|...-+.--+
T Consensus 56 ~lp~-~~sE~e~~~~~~~~a~kN~~---~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaY---TPYQpEisQG~Lqal~e 128 (954)
T PRK12566 56 DLPA-ALDEQAALARLRGYAEQNQV---WTSLIGMGYHGTVTPTVILRNVLENPGWYTAY---TPYQPEIAQGRLEALLN 128 (954)
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCC---ccccccccccCCcCcHHHHHHHHhCchhhhcC---CCCCchhhhHHHHHHHH
Confidence 3454 57888999998886544322 233433221122234444 3232 222 11112233333333335
Q ss_pred HHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccch----HH
Q psy9807 134 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACTE----LE 209 (561)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~s----~~ 209 (561)
-..++++|.|++-. ..-+.-++|.+- .|+..+++.. + .+ ..+++|..+.+. +.
T Consensus 129 ~Qtmi~~LtGm~va---------NASl~D~atA~a-EA~~ma~~~~--~----~k-------~~~~~v~~~~hP~~~~v~ 185 (954)
T PRK12566 129 FQQMTIDLTGLDLA---------NASLLDEATAAA-EAMALAKRVA--K----SK-------SNRFFVDEHCHPQTLSVL 185 (954)
T ss_pred HHHHHHHHhCchhh---------hhhhccchhHHH-HHHHHHHHHh--h----cC-------CCEEEECCCCCHHHHHHH
Confidence 56689999999843 234444555332 2333333221 0 00 123333333322 22
Q ss_pred HH-HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhc
Q psy9807 210 VV-MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAY 288 (561)
Q Consensus 210 ka-a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~ 288 (561)
+. +...|.+++. ++|++.+.+ ..+.|+++. .+..|.+.++++|++++|+.|+.+. +++-
T Consensus 186 ~t~~~~~g~~i~~----------~~~~~~~~~--------~~~~v~vq~-P~~~G~i~d~~~i~~~~h~~gal~~-~~~d 245 (954)
T PRK12566 186 RTRAEGFGFELVV----------DAVDNLAAH--------AVFGALLQY-PDTHGEIRDLRPLIDQLHGQQALAC-VAAD 245 (954)
T ss_pred HHhhhcCCcEEEE----------cchhhcCCC--------CEEEEEEEC-CCCceEEccHHHHHHHHHHcCCEEE-EEeC
Confidence 22 2234445442 445554433 345555544 4567999999999999999998754 4442
Q ss_pred --ccccccCccccccccCccccceeeecCCcccccccc-----ceeEEecChhhHHHhhccCCCccccCC--CCCCCCCC
Q psy9807 289 --AGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-----CSAMWLKDPSWVVNAFNVDPLYLKHDQ--QGSAPDYR 359 (561)
Q Consensus 289 --gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-----~g~l~~r~~~~l~~~~~~~~~yl~~~~--~~~~~~~~ 359 (561)
+...+-.| |--.||.+ +.-++-|+.|.+ .|++.+++. +. ...|+-+-... ..+.+.++
T Consensus 246 ~laL~ll~~P-------ge~GADI~-vG~~Q~fGvp~~~GGP~ag~~a~~~~--~~---R~~PGRivG~s~D~~G~~a~~ 312 (954)
T PRK12566 246 LLSLLVLTPP-------GELGADVV-LGSTQRFGVPMGYGGPHAAYFACRDD--YK---RAMPGRIIGVSRDARGNTALR 312 (954)
T ss_pred HHHHhCCCCh-------hhcCCcEE-eeCCCcCCCCCCCCCCCeeeeeehHH--HH---hhCCCCccceeecCCCCeeee
Confidence 22222222 23356988 455555666654 667777653 22 22233332211 11111111
Q ss_pred cccccC----cCCcc-------h---HHHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q psy9807 360 HWQIPL----GRRFR-------S---LKLWFV--LRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV 416 (561)
Q Consensus 360 ~~~~~~----sr~~~-------a---l~lw~~--l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~ 416 (561)
.++|. =||-. + +++.++ +-++|.+|++++.++.+..+.++++.|.+ +|+++..++
T Consensus 313 -l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~ 383 (954)
T PRK12566 313 -MALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRH 383 (954)
T ss_pred -hhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccCC
Confidence 12211 13321 1 222222 24569999999999999999999999999 699887653
No 375
>KOG0634|consensus
Probab=98.39 E-value=0.00085 Score=68.43 Aligned_cols=143 Identities=12% Similarity=0.017 Sum_probs=90.2
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|..+...-+|-..+.+.....+..|.. ...+.++|+|.|.+...++..+.++ .-.
T Consensus 96 Yg~s~G~peLl~fik~h~~~~ih~p~~------~~wdiiit~G~t~~l~~~l~~~~N~-------------------gd~ 150 (472)
T KOG0634|consen 96 YGQSSGIPELLLFIKDHNRPTIHAPPY------KNWDIIITNGNTDGLFKVLRTLINR-------------------GDH 150 (472)
T ss_pred cccccCcHHHHHHHHHhccccccCCCC------CCceEEEecCCchHHHHHHHHhhcC-------------------CCc
Confidence 334444445555444433334445442 1246789999999988887776543 123
Q ss_pred EecccchHHHH---HHhccCCeEEeeCCCCccChhhHHHHHhhhchhh-cC-Cce-EEEEEecCCCCCccccCH---HHH
Q psy9807 201 ASPACTELEVV---MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDRE-MC-SDL-LQVVATLGTTNCCAFDCL---EEI 271 (561)
Q Consensus 201 v~~s~~s~~ka---a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~-~g-~~p-~~vv~t~gtt~tG~idpl---~eI 271 (561)
|..-.++..-| ++-.|++++.|+.++..|++|.|++.+..- +.. .+ .+| ++-.+..|.+.||.--++ ++|
T Consensus 151 vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w-~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~i 229 (472)
T KOG0634|consen 151 VLIEEYTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNW-KPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKI 229 (472)
T ss_pred eEEecccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcC-CcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHH
Confidence 34444333333 344565555555588899999999999651 221 11 224 344566888899987665 579
Q ss_pred HHHHhhcCceEEechhcc
Q psy9807 272 GQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 272 ~~ia~~~~~~lhVDaA~g 289 (561)
.++||+|++.++-|.-|.
T Consensus 230 y~LArKyDfLIVeDdpYy 247 (472)
T KOG0634|consen 230 YQLARKYDFLIVEDDPYY 247 (472)
T ss_pred HHHHHHcCEEEEecCccc
Confidence 999999999999999876
No 376
>PLN02880 tyrosine decarboxylase
Probab=98.38 E-value=4.6e-07 Score=97.67 Aligned_cols=88 Identities=58% Similarity=0.962 Sum_probs=74.7
Q ss_pred eeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCc---HH
Q psy9807 422 CFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPN---EI 498 (561)
Q Consensus 422 ~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~---~~ 498 (561)
.+.+.+|.++.+||++++|+|+.++.+|.+++++++++.+++|+++++.|++.++||++.+|.+++||||+.+.. +.
T Consensus 347 ~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~ 426 (490)
T PLN02880 347 VVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDN 426 (490)
T ss_pred CCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhh
Confidence 355667788999999999999999999999999999999999999999999999999999999999999997531 22
Q ss_pred HHHHHHHHHhC
Q psy9807 499 NEKLLKRINGN 509 (561)
Q Consensus 499 ~~~l~~~L~~~ 509 (561)
..++-++|.+.
T Consensus 427 ~~~~n~~l~~~ 437 (490)
T PLN02880 427 GNKLNHDLLDA 437 (490)
T ss_pred HHHHHHHHHHH
Confidence 23444555553
No 377
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.37 E-value=8.7e-05 Score=76.54 Aligned_cols=179 Identities=16% Similarity=0.053 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
....++.+.|.+.++-.. ....|++|||+||-.|+..||.....+...+ ..+++.+...
T Consensus 59 ~~~~~la~~L~~~~p~~~---------~~v~f~~sGseAve~Alkla~~~~~~~~~~~---------r~~il~~~~~yHG 120 (339)
T PF00202_consen 59 PEAAELAEKLAELFPGGL---------DRVFFANSGSEAVEAALKLARQYHNKRAYTG---------RRKILAFEGSYHG 120 (339)
T ss_dssp HHHHHHHHHHHHHSSTTE---------EEEEEESSHHHHHHHHHHHHHHHHHHTHHHT---------TTEEEEETTTB-T
T ss_pred cchhhhhhhhhhcccccc---------ceeeeccCchHHHHHHHHHhhcccccccccC---------CceEEEeeeeeec
Confidence 344556667788773221 2568999999999999999993322111111 1244444333
Q ss_pred chHHHHHHhc------------cCCeEEeeCCCCcc------ChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc-
Q psy9807 206 TELEVVMLDW------------LGKMLDLPKEFLAC------SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD- 266 (561)
Q Consensus 206 ~s~~kaa~~~------------g~~v~~v~~~~g~~------d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id- 266 (561)
.+..-. .+. ...+..+|.++-.- ..+.+++.+.+ . ......+|++.-.....|.+-
T Consensus 121 ~t~~~~-s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~iaavivEPi~g~~G~~~~ 195 (339)
T PF00202_consen 121 RTLGAL-SLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAA--L--NADEIAAVIVEPIQGEGGMIPP 195 (339)
T ss_dssp SSHHHH-HHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHH--H--HGGGEEEEEEESSBTTTTSBEE
T ss_pred cCcccc-cccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHh--h--cCCcEEEEEEeccccccCcccc
Confidence 222211 111 12356666421111 11223444433 1 122566777777776667553
Q ss_pred ---CHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecCh
Q psy9807 267 ---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDP 333 (561)
Q Consensus 267 ---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~ 333 (561)
=+++|.++|++||+.+++|..+.|......-+.....++ ..|.++++ |.++.-+..|++++++.
T Consensus 196 ~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav~~~~~ 262 (339)
T PF00202_consen 196 PPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAVLGSEE 262 (339)
T ss_dssp -TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEEEEEHH
T ss_pred ccchhhehcccccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccccccch
Confidence 479999999999999999999887644443222222344 46999996 99987788888888663
No 378
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.34 E-value=4.6e-07 Score=94.37 Aligned_cols=70 Identities=40% Similarity=0.686 Sum_probs=65.7
Q ss_pred ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecC
Q psy9807 424 RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLK 493 (561)
Q Consensus 424 ~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~ 493 (561)
.+.++.++.+|+++++|+|+.++.+|.+++++.+++.+++|++|++.|++.+.||++.+|.+++||||++
T Consensus 304 ~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 304 DYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp CEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred ccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 4455667889999999999999999999999999999999999999999999999999999999999984
No 379
>KOG3843|consensus
Probab=98.30 E-value=1.9e-05 Score=74.93 Aligned_cols=180 Identities=16% Similarity=0.108 Sum_probs=117.0
Q ss_pred ceEEecc-c-chHHHHHHhccCCeEEeeC----CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC---ccccCH
Q psy9807 198 NLIASPA-C-TELEVVMLDWLGKMLDLPK----EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC---CAFDCL 268 (561)
Q Consensus 198 ~~vv~~s-~-~s~~kaa~~~g~~v~~v~~----~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t---G~idpl 268 (561)
+.++..- + .|-.|...-.|.+.+.|+. +.-.-|++++++.+++ . | +-++.+.+.||+. -.-|.+
T Consensus 104 kyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee--~---g--~dcilci~sttscfapr~pd~l 176 (432)
T KOG3843|consen 104 KYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEE--L---G--EDCILCIHSTTSCFAPRSPDNL 176 (432)
T ss_pred cEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHH--h---C--CceEEEEeecccccCCCCCchH
Confidence 4455443 3 5656666667777666655 3457799999999988 2 2 3334444444443 455899
Q ss_pred HHHHHHHhhcCceEEechhcccccccCccccccc---cCccccceeeecCCccccccccceeEEecChhhHHHhhccCCC
Q psy9807 269 EEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLM---KGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPL 345 (561)
Q Consensus 269 ~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~---~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~ 345 (561)
++|+.||..|++.-.|.-|||.- +.+.-+.. ....+.|.++-+.-|.+.+|.|.+++..-+...++..- ..
T Consensus 177 eaiaaica~~diphivnnayglq---see~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~ia---k~ 250 (432)
T KOG3843|consen 177 EAIAAICAAHDIPHIVNNAYGLQ---SEECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIA---KM 250 (432)
T ss_pred HHHHHHHHccCchhhhccccccc---hHHHHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHH---Hh
Confidence 99999999999999999999842 22222222 22346799999999999999877665432322222211 12
Q ss_pred ccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy9807 346 YLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS 406 (561)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 406 (561)
|-... ....++-+..++-++|..++.+......++-.+++..+.+
T Consensus 251 ypgra----------------sa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 251 YPGRA----------------SASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred CCCcc----------------ccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 21000 0123466778888999999999888888887777776654
No 380
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.30 E-value=3.5e-05 Score=78.51 Aligned_cols=117 Identities=12% Similarity=-0.022 Sum_probs=80.6
Q ss_pred chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCC--CCCccccCHHHHHHHHhhcCceEE
Q psy9807 206 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGT--TNCCAFDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt--t~tG~idpl~eI~~ia~~~~~~lh 283 (561)
+++...++++|++++.+-+ .++-...+++.+|.+ ...++.-++.+ ..+|. -++++++++||+||+.+.
T Consensus 122 ~~v~d~~~~aG~~l~EvG~-tn~t~~~d~~~AIne--------~ta~llkV~s~~~~f~~~-l~~~~l~~ia~~~~lpvi 191 (395)
T COG1921 122 FRVPDIIRLAGAKLVEVGT-TNRTHLKDYELAINE--------NTALLLKVHSSNYGFTGM-LSEEELVEIAHEKGLPVI 191 (395)
T ss_pred CChhHHHHHcCCEEEEecc-cCcCCHHHHHHHhcc--------CCeeEEEEeecccccccc-ccHHHHHHHHHHcCCCEE
Confidence 8999999999999888775 334668899999988 34444444433 33332 378889999999999999
Q ss_pred echhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhH
Q psy9807 284 VDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWV 336 (561)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l 336 (561)
||+|-|.-.-.-+..+..+ -..+|.+++|++|.|++|. +|++.- .++.+
T Consensus 192 vD~aSg~~v~~e~~l~~~l--a~GaDLV~~SgdKllgGPq-aGii~G-kKelI 240 (395)
T COG1921 192 VDLASGALVDKEPDLREAL--ALGADLVSFSGDKLLGGPQ-AGIIVG-KKELI 240 (395)
T ss_pred EecCCccccccccchhHHH--hcCCCEEEEecchhcCCCc-cceEec-hHHHH
Confidence 9988664211111122211 1246999999999999998 555554 44444
No 381
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.28 E-value=6.5e-05 Score=74.49 Aligned_cols=206 Identities=14% Similarity=0.089 Sum_probs=120.6
Q ss_pred cceEEeccc-chHHHHH-HhccCCeEEeeC-----------CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCc
Q psy9807 197 ANLIASPAC-TELEVVM-LDWLGKMLDLPK-----------EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC 263 (561)
Q Consensus 197 ~~~vv~~s~-~s~~kaa-~~~g~~v~~v~~-----------~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG 263 (561)
.+++++... +.-.++- ...|...+-+++ -.|.+|++.|++.|++ ... ...|.++.....++..|
T Consensus 124 ~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lide--vG~-~nvp~I~~tiT~NsagG 200 (471)
T COG3033 124 SKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDE--VGA-DNVPYIVLTITNNSAGG 200 (471)
T ss_pred ccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHH--hCc-ccCcEEEEEEeccccCC
Confidence 345555444 4444553 455554444443 2478999999999987 322 23676666666666666
Q ss_pred c---ccCHHHHHHHHhhcCceEEechhc-ccccccC----cccccc-ccC-----ccccceeeecCCccccccccceeEE
Q psy9807 264 A---FDCLEEIGQVCRQKDVWLHVDAAY-AGSAFIC----PENRYL-MKG-----VELADSFNFNPHKWMLVTFDCSAMW 329 (561)
Q Consensus 264 ~---idpl~eI~~ia~~~~~~lhVDaA~-gg~~~~~----~~~~~~-~~g-----i~~aDsi~~~~HK~l~~P~g~g~l~ 329 (561)
. ++.++++.+||++|++.+.+|+|- +=.+.|. +.+++. ++. +..||-++.|+-|=..++. -|++.
T Consensus 201 QpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnm-GGfl~ 279 (471)
T COG3033 201 QPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNM-GGFLC 279 (471)
T ss_pred CcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceecc-ccEEE
Confidence 3 478999999999999999999983 3233332 223321 122 2468999999999888887 47888
Q ss_pred ecChhhH--HHhhc-cCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHHHHh
Q psy9807 330 LKDPSWV--VNAFN-VDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYL-QEYIRKQISLAKEFEQLVR 405 (561)
Q Consensus 330 ~r~~~~l--~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~-~~~~~~~~~la~~l~~~l~ 405 (561)
++|+... -.... ....| .+.+.|+. --+|...++++- | .+++ ..++++.....+||.+.|.
T Consensus 280 ~~D~~~fDvy~~~~~~~V~~------eG~~tYGg---l~GrdmealAvG--L----~e~~~~~yl~~Rv~Qv~YL~~~l~ 344 (471)
T COG3033 280 FKDDSFFDVYEECRTLVVVQ------EGFPTYGG---LAGRDMEALAVG--L----REGVNFDYLAHRVAQVQYLADGLE 344 (471)
T ss_pred ecCccHHHHHHHHHhheEee------ccccccCc---ccchhHHHHHHH--H----HHhcCcHHHHHHHHHHHHHHHHHH
Confidence 8887432 11111 00011 11122221 113333333221 1 1121 2456666777889999999
Q ss_pred cCCCeEEecccccccee
Q psy9807 406 SDDRFEVIYEVLMGLVC 422 (561)
Q Consensus 406 ~~~g~~l~~~~~~~~v~ 422 (561)
+. |+.++.|...--|.
T Consensus 345 ~~-GVpi~~paGGHavf 360 (471)
T COG3033 345 EA-GVPIVQPAGGHAVF 360 (471)
T ss_pred hc-CCeeEecCCCceEE
Confidence 87 88877665544433
No 382
>KOG0628|consensus
Probab=98.22 E-value=1.2e-06 Score=89.23 Aligned_cols=61 Identities=66% Similarity=1.154 Sum_probs=57.0
Q ss_pred eeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhh
Q psy9807 422 CFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 482 (561)
Q Consensus 422 ~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~ 482 (561)
.-+|+.|++|++||+|++|+|+.+|.+|.+++++++|+++++|++|.+++.+.+.||++.+
T Consensus 341 ~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~ 401 (511)
T KOG0628|consen 341 APDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNK 401 (511)
T ss_pred CCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecc
Confidence 4467889999999999999999999999999999999999999999999999999998654
No 383
>KOG1402|consensus
Probab=98.18 E-value=0.00039 Score=68.31 Aligned_cols=223 Identities=14% Similarity=0.086 Sum_probs=123.1
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-------
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC------- 205 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~------- 205 (561)
+-.+.+.++||++. .+=+.+|-||+-+|+..||.+.... + ++.. ....++++-.
T Consensus 105 ~f~~~vt~lf~~~k-----------vlpmnTGaEa~Eta~KLaR~wgy~~-K----~ip~---nka~il~~~~nFhGrT~ 165 (427)
T KOG1402|consen 105 EFAEYVTKLFGYDK-----------VLPMNTGAEAVETACKLARKWGYRK-K----NIPK---NKAKILSAENNFHGRTL 165 (427)
T ss_pred HHHHHHHHhcCcce-----------eeecccchhHHHHHHHHHHHHHHhh-c----cCCc---cceeEEEecccccCcee
Confidence 34456688999864 2446778999999999999775432 1 0000 0112222211
Q ss_pred ---------chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc----CHHHHH
Q psy9807 206 ---------TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD----CLEEIG 272 (561)
Q Consensus 206 ---------~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id----pl~eI~ 272 (561)
.|+.+-.-..-..+..|| --|.++|+.+|+. . .....++.--.-..|.+- -|++..
T Consensus 166 ~ais~s~d~ds~~~fgp~~P~~~~~v~----Y~d~eale~~l~~--~-----~vaaFivEPIQGEaGVvvP~~GYL~~vr 234 (427)
T KOG1402|consen 166 GAISLSTDPDSWDGFGPFLPGVVDKVP----YGDAEALEVALKS--P-----NVAAFIVEPIQGEAGVVVPPPGYLKKVR 234 (427)
T ss_pred eeEEecCCcchhhccCCCCCCcceeec----cCCHHHHHHHhcC--C-----CeeEEEeeccccccceEeCCchhHHHHH
Confidence 122211100111255566 5578999999976 2 333344433344445553 489999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccc-ccccceeEEecChhhHHHhhccCCCccccCC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWML-VTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~-~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
++|++||+++++|..+.|......-+....+.+ +.|.+.+ -|.|. +-+..+.++..+.-.+. + .+. ..
T Consensus 235 eLCtkynvl~I~DEvQTGl~RTGk~la~d~env-~PDivil--gKalSGG~~Pvsavl~~~~im~~--~--~pg----eH 303 (427)
T KOG1402|consen 235 ELCTKYNVLLIADEVQTGLARTGKLLACDYENV-RPDIVIL--GKALSGGVYPVSAVLADDDIMLN--I--KPG----EH 303 (427)
T ss_pred HHHHhhcEEEEehhhhhcccccCcEEEeehhhc-CCCeEEE--eccccCCeeeeEEEEecHHHHhc--c--CCC----cc
Confidence 999999999999998877543221111111112 4577765 35543 22344555553322211 1 111 00
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD 408 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 408 (561)
+. +.....|+.-.++..+...--+++.+++..+...|+..|.+++
T Consensus 304 -gs-----------TyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~ 348 (427)
T KOG1402|consen 304 -GS-----------TYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQ 348 (427)
T ss_pred -cc-----------ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 10 1112345555556666655567788889999999999998864
No 384
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.16 E-value=0.0025 Score=72.62 Aligned_cols=99 Identities=11% Similarity=0.089 Sum_probs=60.0
Q ss_pred hhHHHHHhhhchhhcCCceEEEEEecC-CCCCcccc----CHHHHHHHHhhcCceEEechhcccccccCccccccccCcc
Q psy9807 232 GKGGGVIQRKSDREMCSDLLQVVATLG-TTNCCAFD----CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE 306 (561)
Q Consensus 232 ~~Le~~i~~~~~~~~g~~p~~vv~t~g-tt~tG~id----pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~ 306 (561)
+.+++.|++......+..+.+|++.-. ....|.+- =++++.++|++||+.+++|..+.|......-+..-..|+
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 446666643000112335556666542 23335553 489999999999999999999887654443222222234
Q ss_pred ccceeeecCCccccccc-cceeEEecCh
Q psy9807 307 LADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 307 ~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
..|.+++ -|.|+.-+ ..|++++++.
T Consensus 646 ~PDIi~~--gKgLtgG~~Plaa~l~~~~ 671 (817)
T PLN02974 646 KPDIACY--AKLLTGGLVPLAATLATEE 671 (817)
T ss_pred CCCEEee--cccccCCCCccEEEEEcHH
Confidence 4688876 68887653 6777777553
No 385
>KOG1401|consensus
Probab=98.15 E-value=0.0018 Score=65.71 Aligned_cols=159 Identities=15% Similarity=0.040 Sum_probs=99.5
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeE------EeeC--C
Q psy9807 157 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKML------DLPK--E 225 (561)
Q Consensus 157 ~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~------~v~~--~ 225 (561)
-..|+.+||+||.+||..||.....+. + +. ..+++.+... .++.-.. ..+..-+ ..|- .
T Consensus 118 rvff~nsGTeAne~ALK~Ark~~~~~~----~---~~--~t~~Iaf~nsyHG~tlgals-~~~~s~y~~~~~p~~p~v~~ 187 (433)
T KOG1401|consen 118 RVFFCNSGTEANETALKFARKFTGKKH----P---EK--KTKFIAFENSYHGRTLGALS-VTGNSKYGLPFDPIAPDVVT 187 (433)
T ss_pred EEEEecCCcHHHHHHHHHHHHhhcccC----C---cc--ceeEEEEecCcCCcchhHHH-hhcccccCCCCCCCCCceee
Confidence 468999999999999999997643221 0 00 0135555443 2222111 1111111 1121 2
Q ss_pred CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc----CHHHHHHHHhhcCceEEechhcccccccCcccccc
Q psy9807 226 FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD----CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL 301 (561)
Q Consensus 226 ~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id----pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~ 301 (561)
.--.|+.+|++.++. .. | ...+|++.-+.-.-|.+- =+..|.++|+++|+.++.|..+.|.....+.+.+-
T Consensus 188 ~~ynd~t~l~k~~~~--h~--~-~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e 262 (433)
T KOG1401|consen 188 AEYNDSTALEKLFES--HK--G-EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQE 262 (433)
T ss_pred cccCCHHHHHHHHHh--CC--C-ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHH
Confidence 225579999999987 21 1 356777777776666552 36778899999999999999988766655554443
Q ss_pred ccCccccceeeecCCccccccccceeEEecCh
Q psy9807 302 MKGVELADSFNFNPHKWMLVTFDCSAMWLKDP 333 (561)
Q Consensus 302 ~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~ 333 (561)
.-++ ..|..++ -|.|+.-.+.|+..++++
T Consensus 263 ~~~~-~PDI~t~--aK~L~gGlPigA~~v~~k 291 (433)
T KOG1401|consen 263 YFGV-TPDITTV--AKPLGGGLPIGATGVRDK 291 (433)
T ss_pred HhCc-CCcceee--hhhccCCceeEEEeehHH
Confidence 3232 3576665 688877777888998775
No 386
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.85 E-value=1.1e-05 Score=81.54 Aligned_cols=161 Identities=13% Similarity=0.061 Sum_probs=36.4
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-------
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC------- 205 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~------- 205 (561)
.+.+.++.+.|.. +++++.+...|.+.++.+. .. +.++++...+
T Consensus 51 ~v~~ll~~ltgAe-----------aA~VvNnnaAAv~L~l~~l----a~--------------~~EvIvsRGelVeiGgs 101 (367)
T PF03841_consen 51 HVEELLCELTGAE-----------AALVVNNNAAAVLLALNTL----AK--------------GKEVIVSRGELVEIGGS 101 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccc-----------ccccccccccccccccccc----cc--------------ccccccccccccccccc
Confidence 3445668888875 3577776555555444331 10 1234555444
Q ss_pred chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCC--Cccc--cCHHHHHHHHhhcCce
Q psy9807 206 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN--CCAF--DCLEEIGQVCRQKDVW 281 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~--tG~i--dpl~eI~~ia~~~~~~ 281 (561)
+.+....+..|++++.|-+ ..+-.+++.+++|.+ .+.++.-.+-++. .|-. -+++++++++|+||++
T Consensus 102 FRip~vm~~sGa~lvEVGt-tN~t~~~Dye~AI~e--------~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp 172 (367)
T PF03841_consen 102 FRIPDVMRQSGARLVEVGT-TNRTHLSDYEKAITE--------NTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLP 172 (367)
T ss_dssp --------------------------------------------------------------------HHHHHHHHHT--
T ss_pred ccccccccccccccccccc-ccccccccccccccc--------cccccccccccccccccccccccHHHHHHHHhhcCCc
Confidence 3455556667888877776 224557889999987 3444444432222 2211 3899999999999999
Q ss_pred EEechhccccccc----CccccccccCc-cccceeeecCCccccccccceeEEecC
Q psy9807 282 LHVDAAYAGSAFI----CPENRYLMKGV-ELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 282 lhVDaA~gg~~~~----~~~~~~~~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
+++|.+-|...=+ .|.-....+.+ ..+|.+++|+-|.|++|. +|++.-|.
T Consensus 173 ~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk 227 (367)
T PF03841_consen 173 VIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKK 227 (367)
T ss_dssp EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEH
T ss_pred EEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCH
Confidence 9999765532111 11111111222 247999999999999998 67777654
No 387
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=97.77 E-value=0.0035 Score=63.37 Aligned_cols=212 Identities=10% Similarity=-0.065 Sum_probs=125.1
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHHH-HhccCCeEEeeC---CCCccC
Q psy9807 157 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVVM-LDWLGKMLDLPK---EFLACS 230 (561)
Q Consensus 157 ~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~kaa-~~~g~~v~~v~~---~~g~~d 230 (561)
.++=|.|||.|.-.+....... .++..|+.|+ ....++. .-.|.++...|- +...+|
T Consensus 96 ~t~Qt~GGTGAL~~~A~fl~~~-----------------~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~d 158 (396)
T COG1448 96 ATVQTLGGTGALRVAADFLARF-----------------FPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLD 158 (396)
T ss_pred hheecCCcchHHHHHHHHHHHh-----------------CCCceEEeCCCCcHhHHHHHHhcCCceeeeecccccccccc
Confidence 4577899999976554332211 2345688888 5555665 457889988887 455689
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHHHHHhhcCceEEechhcccccccCccc----ccccc
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPEN----RYLMK 303 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~----~~~~~ 303 (561)
.+.+-..|++ .. +| ..+++. .+.-+.||.- +...+|.++.++.|+.-.+|-||=|+.--.++- |....
T Consensus 159 f~~mla~L~~--a~-~~-~vvLLH-~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~ 233 (396)
T COG1448 159 FDGMLADLKT--AP-EG-SVVLLH-GCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAE 233 (396)
T ss_pred HHHHHHHHHh--CC-CC-CEEEEe-cCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHH
Confidence 9888888876 21 22 222222 3344555532 467889999999999999999976654332221 11111
Q ss_pred CccccceeeecCCcccccc---ccceeEEecChhhHHHhhcc-----CCCccccCCCCCCCCCCcccccCcCCcchHHH-
Q psy9807 304 GVELADSFNFNPHKWMLVT---FDCSAMWLKDPSWVVNAFNV-----DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKL- 374 (561)
Q Consensus 304 gi~~aDsi~~~~HK~l~~P---~g~g~l~~r~~~~l~~~~~~-----~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~l- 374 (561)
.. .-=.++.|+.|.|+.- .||-.+...+.+.....++. ...|-.. +.. .+..++.
T Consensus 234 ~~-~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnP------P~~---------Ga~vva~I 297 (396)
T COG1448 234 VG-PELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNP------PAH---------GAAVVATI 297 (396)
T ss_pred hC-CcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCC------chh---------hHHHHHHH
Confidence 11 1147889999988742 24444445565554444332 2223111 000 0111111
Q ss_pred --HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy9807 375 --WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS 406 (561)
Q Consensus 375 --w~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 406 (561)
--.|+..-...+..+.++..++.+.|.+.|++
T Consensus 298 L~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~ 331 (396)
T COG1448 298 LNNPELRAEWEQELEEMRQRILEMRQALVDALKA 331 (396)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11234455667888889999999999999998
No 388
>KOG0258|consensus
Probab=97.68 E-value=0.00074 Score=67.87 Aligned_cols=147 Identities=12% Similarity=0.000 Sum_probs=107.4
Q ss_pred cccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc
Q psy9807 117 IGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII 196 (561)
Q Consensus 117 ~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~ 196 (561)
+.+.|..|....-+-+.+.+++.+.=|.|.+ ..+.++|+|+|.|...-|...... + .
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~-------p~dI~LT~GAS~ai~~il~l~~~~---------~-------~ 161 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPAD-------PEDIFLTTGASPAIRSILSLLIAG---------K-------K 161 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccCCCCC-------HHHeeecCCCcHHHHHHHHHHhcC---------C-------C
Confidence 5667888888888889999999998887643 247889999999876555442211 0 1
Q ss_pred cceEEecccchHHHHH-HhccCCe--EEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHH
Q psy9807 197 ANLIASPACTELEVVM-LDWLGKM--LDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLE 269 (561)
Q Consensus 197 ~~~vv~~s~~s~~kaa-~~~g~~v--~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~ 269 (561)
..+.|....|.+..|. .+.|+.. ..+.- .++.+|.+.|++.+++ .+ ++..|.++|+.-..+.||.+ ..++
T Consensus 162 ~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~e--A~-k~i~~r~lvvINPGNPTGqvls~e~ie 238 (475)
T KOG0258|consen 162 TGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDE--AR-KGINPRALVVINPGNPTGQVLSEENIE 238 (475)
T ss_pred CceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHH--Hh-ccCCceEEEEECCCCccchhhcHHHHH
Confidence 2356666666666663 3444433 33444 7889999999999998 77 67777766666666778877 5899
Q ss_pred HHHHHHhhcCceEEechhcc
Q psy9807 270 EIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~g 289 (561)
+|..+|+++++.+..|..|-
T Consensus 239 ~i~~fa~~~~l~llaDEVYQ 258 (475)
T KOG0258|consen 239 GIICFAAEEGLVLLADEVYQ 258 (475)
T ss_pred HHHHHHHHcCeEEechHHHH
Confidence 99999999999999998754
No 389
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=97.67 E-value=4.2e-05 Score=82.95 Aligned_cols=69 Identities=22% Similarity=0.293 Sum_probs=64.5
Q ss_pred ccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC
Q psy9807 426 KHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG 494 (561)
Q Consensus 426 ~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~ 494 (561)
.++.++.+|+++++++|+.++.+|..|+++.+++.++++++|++.|++.|+||++.+|.+++||||+.+
T Consensus 371 ~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p 439 (522)
T TIGR03799 371 GSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVP 439 (522)
T ss_pred ccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeC
Confidence 345568889999999999999999999999999999999999999999999999999999999999865
No 390
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.65 E-value=0.015 Score=58.75 Aligned_cols=161 Identities=16% Similarity=0.037 Sum_probs=99.1
Q ss_pred HHHHhcCCCccccccCCCCCCeEE---eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHH
Q psy9807 137 WLGKMLDLPKEFLACSGGKGGGVI---QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVV 211 (561)
Q Consensus 137 ~la~l~g~~~~~~~~~~~~~~g~~---t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~ka 211 (561)
-+++.||.++. ++ ..|||.|.-++|....+. +++++..+.. -.+++.
T Consensus 62 iyA~vfgaE~A-----------LVRpq~vSGTHAi~~~Lfg~Lrp-----------------GD~ll~~tG~PYDTL~~V 113 (403)
T PF06838_consen 62 IYADVFGAEDA-----------LVRPQFVSGTHAIALALFGVLRP-----------------GDELLSITGKPYDTLEEV 113 (403)
T ss_dssp HHHHHCT-SEE-----------EEETTS-SHHHHHHHHHHHH--T-----------------T-EEEESSSS--CCHHHH
T ss_pred HHHHHhCchhh-----------hhcccccchHHHHHHHHHhcCCC-----------------CCeEEEcCCCchhhHHHH
Confidence 45899998753 33 356899988877764321 2345555555 556665
Q ss_pred HHh----------ccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEE--ecCCCCCc--cccCHHHHHHHHh
Q psy9807 212 MLD----------WLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVA--TLGTTNCC--AFDCLEEIGQVCR 276 (561)
Q Consensus 212 a~~----------~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~--t~gtt~tG--~idpl~eI~~ia~ 276 (561)
.-+ .|+....||. ++|.+|.+.++++|++ .+++|.. +.|.++-- .++.|++++++.|
T Consensus 114 IG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~--------~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk 185 (403)
T PF06838_consen 114 IGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALKP--------NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVK 185 (403)
T ss_dssp HTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHT--------TEEEEEEE-S-TTSSS----HHHHHHHHHHHH
T ss_pred hCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhcc--------CceEEEEecCCCCCCCCCCCHHHHHHHHHHHH
Confidence 422 3456888999 9999999999999987 4556655 45666543 4468888888888
Q ss_pred hc--CceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHh
Q psy9807 277 QK--DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNA 339 (561)
Q Consensus 277 ~~--~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~ 339 (561)
+. ++++.||-|||=+ .+.....- -.||.++.|.=|..++- ..+|..++...+.+..+
T Consensus 186 ~~~p~~iifVDNCYGEF---vE~~EP~~---vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~ 245 (403)
T PF06838_consen 186 EINPDVIIFVDNCYGEF---VETQEPTE---VGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERA 245 (403)
T ss_dssp HH-TTSEEEEE-TTTTT---TSSS-GGG---GT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHH
T ss_pred hhCCCeEEEEeCCccee---ccccCccc---cchhheeccceeCCCCCccCcCCEEechHHHHHHH
Confidence 76 6899999999832 22111111 15799999999988754 35777777777665543
No 391
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=97.63 E-value=9.3e-05 Score=78.88 Aligned_cols=84 Identities=23% Similarity=0.331 Sum_probs=70.1
Q ss_pred chhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEe
Q psy9807 437 RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVP 516 (561)
Q Consensus 437 ~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~ 516 (561)
+.++.|+.++.+|.+|+++.+++++++|+++++.|++.+.||++.+|.+++||||+++..+......+++.+.|..+...
T Consensus 324 ~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~~~~~gw~v~~~ 403 (460)
T COG0076 324 QALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSERLDRRGWQVPAQ 403 (460)
T ss_pred HHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHHHHhcCceeecc
Confidence 67899999999999999999999999999999999999999999999999999999553332345667777777766544
Q ss_pred eeEC
Q psy9807 517 SKIR 520 (561)
Q Consensus 517 ~~~~ 520 (561)
....
T Consensus 404 ~~~~ 407 (460)
T COG0076 404 LLPK 407 (460)
T ss_pred cCCc
Confidence 4333
No 392
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=97.60 E-value=0.00011 Score=80.59 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=54.7
Q ss_pred cchhhHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHhcc------Cchhhh--hhhhhhcceeeecCC
Q psy9807 436 FRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRS------DDRFEV--IYEVLMGLVCFRLKG 494 (561)
Q Consensus 436 ~~~~k~w~~~~~~--g~~~~~~~~~~~~~~a~~~~~~l~~------~~~~~~--~~~~~~~~v~f~~~~ 494 (561)
++++++|+.++.+ |.+|+++.+++++++|+++++.|++ .+.||+ +.+|++++||||+.+
T Consensus 435 a~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~ 503 (608)
T TIGR03811 435 ATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNE 503 (608)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEEec
Confidence 5589999999999 9999999999999999999999998 677887 899999999999863
No 393
>KOG0633|consensus
Probab=97.60 E-value=0.006 Score=58.28 Aligned_cols=72 Identities=13% Similarity=0.047 Sum_probs=60.8
Q ss_pred HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc-CceEEechhcc
Q psy9807 212 MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK-DVWLHVDAAYA 289 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~-~~~lhVDaA~g 289 (561)
+.+.+++|+.+|. .++.|+.|++.+.++. +. .++++.+|...+.||.+-..+.|-++.+-- |..+.||.||-
T Consensus 128 A~iNd~eVvkvpl~pdF~lnvdai~evl~~--ds----~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYi 201 (375)
T KOG0633|consen 128 AAINDAEVVKVPLNPDFSLNVDAIAEVLEL--DS----KIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYI 201 (375)
T ss_pred eecCCceEEEecCCCCccccHHHHHHHHhc--cc----cceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeE
Confidence 3467889999999 9999999999999977 42 688899999999999998777777777653 78999999964
No 394
>KOG1403|consensus
Probab=97.37 E-value=0.024 Score=55.30 Aligned_cols=241 Identities=12% Similarity=0.051 Sum_probs=132.4
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccc-cccccCc
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPEN-RYLMKGV 305 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~-~~~~~gi 305 (561)
.+.+++.+++ ..+.|....+.++.+-.+--|.|-| ++++++..|.+|-..+.|..+-|+......+ .+-.-++
T Consensus 193 ad~vk~I~~d--~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~f 270 (452)
T KOG1403|consen 193 ADPVKEICQD--QLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNF 270 (452)
T ss_pred hhHHHHHHHH--HHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhcc
Confidence 3566777766 5556655555566666666676643 6788888899999999999887765443322 1111111
Q ss_pred cccceeeecCCccccccccceeEEecChhhHHHhhcc-CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHH
Q psy9807 306 ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV-DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVK 384 (561)
Q Consensus 306 ~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~ 384 (561)
..|.++. -|-++--.+.+++..+. .+.++|.. ...|...-. +-+.......+.++....
T Consensus 271 -iPDIVtm--gKpmGNGhPVa~Vattk--eIA~Af~atgv~YFNTyG--------------GnPVsCAv~laVm~v~e~- 330 (452)
T KOG1403|consen 271 -IPDIVTM--GKPMGNGHPVAAVATTK--EIAQAFHATGVEYFNTYG--------------GNPVSCAVGLAVMRVCED- 330 (452)
T ss_pred -ccchhee--cccCCCCCeeeEEeccH--HHHHHhccccceehhccC--------------CCchhHHHHHHHHHHHhh-
Confidence 3466665 35454444455555543 34455643 456643321 111111111223333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-CeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHH
Q psy9807 385 YLQEYIRKQISLAKEFEQLVRSDD-RFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISL 463 (561)
Q Consensus 385 g~~~~~~~~~~la~~l~~~l~~~~-g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~ 463 (561)
+.+.++..+...+|...|++.. ..+++.+... +-.| |.+.+.
T Consensus 331 --E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRG-vGLF----iGIdLV------------------------------ 373 (452)
T KOG1403|consen 331 --ENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRG-VGLF----IGIDLV------------------------------ 373 (452)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHhhhccceecccc-ceEE----Eeeeee------------------------------
Confidence 4556677777888888777532 3555554322 1112 111111
Q ss_pred HHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHH
Q psy9807 464 AKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSW 543 (561)
Q Consensus 464 a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~ 543 (561)
+.+.. | .+..+....+..+|.+...+.++...+ ++..|.+-..- -.+++++++++
T Consensus 374 --------kD~~t--------------R-tP~tk~A~~~v~rlke~y~VLlsaDGP-h~NilKiKPPm-CFneena~e~v 428 (452)
T KOG1403|consen 374 --------KDRKT--------------R-TPDTKEAHWVVNRLKELYRVLLSADGP-HRNILKIKPPM-CFNEENADEFV 428 (452)
T ss_pred --------ccccc--------------C-CCcHHHHHHHHHHHHHhhhEEEecCCC-CCceeecCCCc-ccChhhHHHHH
Confidence 10000 0 023444567888999987788776553 35577775432 33667899999
Q ss_pred HHHHHHHHHHHH
Q psy9807 544 NEIKTLTEELLK 555 (561)
Q Consensus 544 ~~l~~~~~~~~~ 555 (561)
..+.++...+.+
T Consensus 429 ~~ld~iLT~mee 440 (452)
T KOG1403|consen 429 LGLDEILTVMEE 440 (452)
T ss_pred HHHHHHHHHHHH
Confidence 999988775443
No 395
>KOG2790|consensus
Probab=97.21 E-value=0.091 Score=51.09 Aligned_cols=340 Identities=13% Similarity=0.064 Sum_probs=183.8
Q ss_pred ccCCCCC-ChHHHHHHHHHhhccccccc---cc---cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeE-EeCChh
Q psy9807 94 AYFPTAN-SYPAIVADILSDSIACIGFT---WI---ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGV-IQGTAS 165 (561)
Q Consensus 94 ~~~~~~~-~~~~~~~~~l~~~~n~~~~~---~~---~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~-~t~ggT 165 (561)
+|.++|. .+.+++-++-...+|-++.+ .+ .|..++.+-+.+...++++++.|+++ ..+ +.+|||
T Consensus 10 nFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~--------~vlf~QGGGt 81 (370)
T KOG2790|consen 10 NFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNY--------KVLFLQGGGT 81 (370)
T ss_pred ecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCce--------eEEEEeCCCc
Confidence 3444444 45578888877887755443 12 34456778888999999999999985 344 456665
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHHHHhccCCeEEeeCC---CCc-cChhhHHHHHh
Q psy9807 166 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVVMLDWLGKMLDLPKE---FLA-CSGGKGGGVIQ 239 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~kaa~~~g~~v~~v~~~---~g~-~d~~~Le~~i~ 239 (561)
. -+.|+..-.-. .+.+ -....+|..+= .+.+.|-+.+..+.+..+.. .|. .|.+.++...+
T Consensus 82 ~-qFaAv~lNL~g----lK~g--------~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~d 148 (370)
T KOG2790|consen 82 G-QFAAVPLNLIG----LKHG--------RCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNPD 148 (370)
T ss_pred c-cccccchhhhc----cccC--------CccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccCCC
Confidence 4 34433321100 0110 01133443332 55555656655554444432 222 35555543322
Q ss_pred hhchhhcCCceEEEEEecCCCCCccc-cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcc
Q psy9807 240 RKSDREMCSDLLQVVATLGTTNCCAF-DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKW 318 (561)
Q Consensus 240 ~~~~~~~g~~p~~vv~t~gtt~tG~i-dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~ 318 (561)
. ..|-..+..|..|.= +++. +-.-+|..+..|-+-. +++... .+..-+.|...++|.
T Consensus 149 a----------~yvyyCaNETVHGVEf~~~P----~~~~~~~vlVaDmSSn---flSrpv-----Dvsk~gvi~aGAQKN 206 (370)
T KOG2790|consen 149 A----------SYVYYCANETVHGVEFDFIP----VNDPKGAVLVADMSSN---FLSRPV-----DVSKFGVIFAGAQKN 206 (370)
T ss_pred c----------cEEEEecCceeeceecCCCC----CCCCCCceEEEecccc---hhcCCc-----cchhcceEEeccccc
Confidence 2 267788889998853 3333 2234678888885432 112111 123447899999998
Q ss_pred ccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhh-HHHHHHHHHHHHHH
Q psy9807 319 MLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLG-VKYLQEYIRKQISL 396 (561)
Q Consensus 319 l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g-~~g~~~~~~~~~~l 396 (561)
.+ |.|..++++|+. .+.......|.-+.-.... .+-++..+-+ |....+-+.++++- ..|+.++.+...+-
T Consensus 207 ~G-~aG~Tvvivr~d-llg~~~~~tP~v~dyk~~~-----~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~K 279 (370)
T KOG2790|consen 207 VG-PAGVTVVIVRKD-LLGNALDITPSVLDYKIMD-----KNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEK 279 (370)
T ss_pred cC-ccccEEEEEehh-hhcccccCCccccceeeec-----cccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHH
Confidence 87 778888888774 2333222223222111000 0111112222 22222233444443 34566666777788
Q ss_pred HHHHHHHHhcCCCeEEec-cccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCc
Q psy9807 397 AKEFEQLVRSDDRFEVIY-EVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD 475 (561)
Q Consensus 397 a~~l~~~l~~~~g~~l~~-~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~ 475 (561)
++.+.+.|.+..||-... ++....
T Consensus 280 skllYd~iD~s~gfy~cpVe~~~RS------------------------------------------------------- 304 (370)
T KOG2790|consen 280 SKLLYDAIDNSNGFYRCPVEPSVRS------------------------------------------------------- 304 (370)
T ss_pred HHHHHHHHHhcCCeEEcccchhhhh-------------------------------------------------------
Confidence 889999999887775431 211100
Q ss_pred hhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 476 RFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 476 ~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
.| -|+||.. .+++..++++.-.+++.+-+- ..+..+-+|.|+-|.- +-++++++++.+++..+
T Consensus 305 --------~M-NV~Fri~-~d~Le~eFLkeA~~~~mv~LK--GhRSVGGiRASlYNAi-sv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 305 --------RM-NVPFRIE-KDELEAEFLKEAAKEHMVQLK--GHRSVGGIRASLYNAI-SVEEVQKLAAFMKEFQK 367 (370)
T ss_pred --------hc-ccceeec-chHHHHHHHHHHHHhhhhccc--cccccccchhhhhccc-cHHHHHHHHHHHHHHHH
Confidence 00 1556664 455555666655555433322 2244556899988744 77799999988876543
No 396
>KOG0629|consensus
Probab=96.93 E-value=0.0011 Score=67.52 Aligned_cols=83 Identities=22% Similarity=0.341 Sum_probs=72.4
Q ss_pred EeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhh--hhhccee
Q psy9807 412 VIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE--VLMGLVC 489 (561)
Q Consensus 412 l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~--~~~~~v~ 489 (561)
++......-|+|+-.+..++-+|+.+-.|+|+-++.-|..|+++.|++.+++|+++++.|++.++|+++.+ |+...+|
T Consensus 351 LFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~ 430 (510)
T KOG0629|consen 351 LFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVC 430 (510)
T ss_pred hhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEe
Confidence 33444455677777777889999999999999999999999999999999999999999999999998887 7888999
Q ss_pred eecCC
Q psy9807 490 FRLKG 494 (561)
Q Consensus 490 f~~~~ 494 (561)
|-+.+
T Consensus 431 fw~vp 435 (510)
T KOG0629|consen 431 FWYVP 435 (510)
T ss_pred eccCc
Confidence 98865
No 397
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=96.84 E-value=0.0011 Score=70.48 Aligned_cols=66 Identities=18% Similarity=0.334 Sum_probs=59.6
Q ss_pred cccccc-chhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhh-hhhcceeeecCCCc
Q psy9807 431 PLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCFRLKGPN 496 (561)
Q Consensus 431 ~~~~~~-~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~-~~~~~v~f~~~~~~ 496 (561)
..+|+. +.++.|+.++.+|..++++.+++.+++++++++.|++.+.||++.+ |.+++|||++.+.+
T Consensus 301 ~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~ 368 (431)
T TIGR01788 301 NFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA 368 (431)
T ss_pred ecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC
Confidence 445554 6688999999999999999999999999999999999999999998 89999999998754
No 398
>PLN02263 serine decarboxylase
Probab=96.42 E-value=0.0035 Score=66.58 Aligned_cols=108 Identities=16% Similarity=0.137 Sum_probs=84.2
Q ss_pred ccccccc-chhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHh
Q psy9807 430 IPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRING 508 (561)
Q Consensus 430 ~~~~~~~-~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~ 508 (561)
+..+|+. ..+++|+.++.+|.+++++.+++++++|+++++.|++. +++++.+|.+++|+|+-+..+ ...
T Consensus 336 i~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~~~---------~~~ 405 (470)
T PLN02263 336 IMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPKDE---------EFV 405 (470)
T ss_pred cCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCchH---------Hhh
Confidence 3556665 57999999999999999999999999999999999998 677778899999999853211 122
Q ss_pred CCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 509 NGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 509 ~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+|. .++.. . ..++++++ ++.+.+.+|++++.|++.....
T Consensus 406 ~gW-~L~~~--~--~~~Hivvm-phv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 406 RRW-QLACQ--G--NIAHVVVM-PSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred cce-EEccC--C--CcEEEEEc-CCCCHHHHHHHHHHHHHHHhhh
Confidence 343 33321 1 36999877 6778899999999998877654
No 399
>KOG1412|consensus
Probab=95.33 E-value=1.6 Score=43.40 Aligned_cols=156 Identities=14% Similarity=0.034 Sum_probs=88.9
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHHH-Hhcc-CCeEEeeC---CCCcc
Q psy9807 157 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVVM-LDWL-GKMLDLPK---EFLAC 229 (561)
Q Consensus 157 ~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~kaa-~~~g-~~v~~v~~---~~g~~ 229 (561)
.|+-+-|||.|+..+..-.- .+. .+-.||.|. ....++. .-.| ..+...|- +...+
T Consensus 101 ~~vQslsGTGAl~~~A~Fl~-~~~----------------~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~ 163 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFLA-TFY----------------NKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCV 163 (410)
T ss_pred cceeeccccchhhhhHHHHH-Hhc----------------ccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCcee
Confidence 56778888998866543221 111 133588888 3333333 3345 34555555 55678
Q ss_pred ChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccc-----cc
Q psy9807 230 SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPEN-----RY 300 (561)
Q Consensus 230 d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~-----~~ 300 (561)
|.+.+-..|+. .. +| . ..|.-.+..+.|| +|| ..+|+++-++.++...-|-||-|.+--.++. |.
T Consensus 164 d~e~~Lsdl~~--AP-e~-s-i~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~ 237 (410)
T KOG1412|consen 164 DLEGFLSDLES--AP-EG-S-IIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRY 237 (410)
T ss_pred cHHHHHHHHhh--CC-CC-c-EEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHH
Confidence 88888777765 21 11 1 1222223345555 566 4568999999999999999987655433321 11
Q ss_pred cc-cCccccceeeecCCccccc--c-ccceeEEecChhhHH
Q psy9807 301 LM-KGVELADSFNFNPHKWMLV--T-FDCSAMWLKDPSWVV 337 (561)
Q Consensus 301 ~~-~gi~~aDsi~~~~HK~l~~--P-~g~g~l~~r~~~~l~ 337 (561)
.+ .|+| =+++-|+.|.++. + .||=.+.++++....
T Consensus 238 fV~~g~e--~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~ 276 (410)
T KOG1412|consen 238 FVEQGFE--LFVCQSFAKNFGLYNERVGNLTVVVNNPAVIA 276 (410)
T ss_pred HHhcCCe--EEEEhhhhhhcccccccccceEEEecChhHHH
Confidence 11 2322 3577788887763 2 345555556664443
No 400
>KOG1405|consensus
Probab=95.29 E-value=0.99 Score=45.47 Aligned_cols=82 Identities=13% Similarity=0.138 Sum_probs=54.3
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEE----ecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCcc
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVA----TLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE 306 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~----t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~ 306 (561)
++.+|+.|.+ -+........+++ +-|.-+.+.-|=+..+.+||++||+-++||..+-|+.....-|.|--.+++
T Consensus 255 l~~Ve~li~~--~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 255 LAEVEDLIVK--YRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHH--HhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCC
Confidence 5667777776 3332223334444 345555566678999999999999999999998877766555554433443
Q ss_pred -ccceeeec
Q psy9807 307 -LADSFNFN 314 (561)
Q Consensus 307 -~aDsi~~~ 314 (561)
-+|.+++|
T Consensus 333 ~PpD~vTFS 341 (484)
T KOG1405|consen 333 SPPDVVTFS 341 (484)
T ss_pred CCccceehh
Confidence 25877763
No 401
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=95.01 E-value=5 Score=41.33 Aligned_cols=179 Identities=12% Similarity=0.021 Sum_probs=87.4
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c-hHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T-ELE 209 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~-s~~ 209 (561)
++++.+++++|.+.+ . ++..|.|.-|++--..++.....-... ..-|.. .+++-..|.. | ...
T Consensus 73 e~r~l~a~llgv~~~---------~-viv~gNSSL~lM~d~i~~a~~~G~~~~-~~PW~~---~~~vKfLCPvPGYDRHF 138 (425)
T PF12897_consen 73 EARELFAELLGVPPE---------N-VIVGGNSSLNLMHDTISRAMLHGVPGS-ETPWCK---EEKVKFLCPVPGYDRHF 138 (425)
T ss_dssp HHHHHHHHHHTS-GG---------G-EEE-SS-HHHHHHHHHHHHHHH--TT--SS-GGG---SS--EEEEEES--HHHH
T ss_pred HHHHHHHHHhCCCHH---------H-EEEeccchHHHHHHHHHHHHhcCCCCC-CCCchh---ccCceEEecCCCchHHH
Confidence 456788999999976 3 444444444554444444332211110 011111 1234444444 3 344
Q ss_pred HHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHH-HhhcCceEEec
Q psy9807 210 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQV-CRQKDVWLHVD 285 (561)
Q Consensus 210 kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~i-a~~~~~~lhVD 285 (561)
..+...|.+++.||..+...|+|.+|+.+.+ |.. ..-+-++..-++.+|..-. +++++.+ +.+.+..+.=|
T Consensus 139 ai~E~~Giemi~VpM~~dGPDmD~Ve~LV~~--D~s---vKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WD 213 (425)
T PF12897_consen 139 AITEHFGIEMIPVPMTEDGPDMDMVEELVAE--DPS---VKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWD 213 (425)
T ss_dssp HHHHHCT-EEEEEEEETTEE-HHHHHHHTHT--STT---EEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE
T ss_pred HHHHhhCcEEEecCCCCCCCCHHHHHHHHhc--CCc---cceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEee
Confidence 4567889999999994445699999999977 432 2224566667777887743 3444444 24679999999
Q ss_pred hhcccccccCcccc----ccc---cCccccc--eeeecCCccccccccceeEEe
Q psy9807 286 AAYAGSAFICPENR----YLM---KGVELAD--SFNFNPHKWMLVTFDCSAMWL 330 (561)
Q Consensus 286 aA~gg~~~~~~~~~----~~~---~gi~~aD--si~~~~HK~l~~P~g~g~l~~ 330 (561)
-||+.+.+..+.-+ ..+ +.....| .+..|..|--+.-.|.+++..
T Consensus 214 NAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aa 267 (425)
T PF12897_consen 214 NAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAA 267 (425)
T ss_dssp -TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE
T ss_pred cCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeec
Confidence 99997776433211 111 1112233 456778887665455555544
No 402
>PLN03032 serine decarboxylase; Provisional
Probab=93.54 E-value=0.078 Score=55.27 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=82.4
Q ss_pred ccccccc-cchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHH
Q psy9807 429 QIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRIN 507 (561)
Q Consensus 429 ~~~~~~~-~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~ 507 (561)
.+..+|. ++.+++|+.++.+|.+++++.+++.+++|+++++.|++. +++++.+|.+++|+|+-+..+ .+.
T Consensus 268 ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~~~--------~~~ 338 (374)
T PLN03032 268 TIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPMDE--------AFI 338 (374)
T ss_pred cccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCCcH--------hHh
Confidence 3455664 678999999999999999999999999999999999985 788999999999999875311 122
Q ss_pred hCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9807 508 GNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKT 548 (561)
Q Consensus 508 ~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 548 (561)
.| +.++.. + ..+|+++| ++++++.+|++++.|++
T Consensus 339 -~~-w~l~~~--~--~~~hi~vm-~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 339 -KK-WQLACE--G--DIAHVVVM-PNVTVEKLDEFVEELVE 372 (374)
T ss_pred -he-eeeccc--C--CEEEEEEC-CCCCHHHHHHHHHHHhc
Confidence 23 333322 1 27999988 77788999999988865
No 403
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=91.72 E-value=6.8 Score=38.84 Aligned_cols=145 Identities=16% Similarity=0.006 Sum_probs=89.0
Q ss_pred HHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chHHHHHHh-
Q psy9807 138 LGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TELEVVMLD- 214 (561)
Q Consensus 138 la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~~kaa~~- 214 (561)
+++.||....+- .--| -+||.|+-.||....+. +++++..+.. -.++...-+
T Consensus 74 yA~vf~aE~a~V-------Rpq~-isGTHAI~~aLfg~LRp-----------------gDell~i~G~PYDTLeevIG~r 128 (416)
T COG4100 74 YAQVFGAEAALV-------RPQI-ISGTHAIACALFGILRP-----------------GDELLYITGSPYDTLEEVIGLR 128 (416)
T ss_pred HHHHhcccccee-------eeee-ecchhHHHHHHHhccCC-----------------CCeEEEecCCcchhHHHHhccC
Confidence 477787765321 1123 35688876666542211 2344444444 445444322
Q ss_pred ---------ccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEE--ecCCCCCc--cccCHHHHHHHHhhc--
Q psy9807 215 ---------WLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVA--TLGTTNCC--AFDCLEEIGQVCRQK-- 278 (561)
Q Consensus 215 ---------~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~--t~gtt~tG--~idpl~eI~~ia~~~-- 278 (561)
.|+.-+.||. .+|.+|.+.++..+.+ .+++|.. +.|..+.- .+++++++..+.|+-
T Consensus 129 g~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~--------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inp 200 (416)
T COG4100 129 GEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAISD--------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINP 200 (416)
T ss_pred CCCcccHHHhCcceeecccccCCcccHHHHHHhcCc--------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCC
Confidence 2456778898 8999999999999987 4444444 45555542 457888888888875
Q ss_pred CceEEechhcccccccCccccccccCccccceeeecCCccccc
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV 321 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~ 321 (561)
|+.+.||-+||=+. .+.... --.||.+..|.=|.-++
T Consensus 201 n~ivFVDNCYGEFv---E~~EPt---~vGaDliAGSLIKNpGG 237 (416)
T COG4100 201 NVIVFVDNCYGEFV---EEKEPT---HVGADLIAGSLIKNPGG 237 (416)
T ss_pred CEEEEEeccchhhh---hccCcc---ccchhhhccceeeCCCC
Confidence 68899999998432 111110 11469999988886553
No 404
>KOG2040|consensus
Probab=85.65 E-value=63 Score=35.75 Aligned_cols=152 Identities=13% Similarity=0.075 Sum_probs=80.1
Q ss_pred eEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccccee--
Q psy9807 250 LLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSA-- 327 (561)
Q Consensus 250 p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~-- 327 (561)
...|.+....| .|.+.|..++++.+++.|..+.+---.-+..++-|. |--.||....+.+. |++|.|-|.
T Consensus 248 v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpP------gefGaDIavGSsQR-FGVPlGYGGPH 319 (1001)
T KOG2040|consen 248 VSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLLALTILRPP------GEFGADIAVGSSQR-FGVPLGYGGPH 319 (1001)
T ss_pred eeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhhHHHccCCh------hhcCceeeeccccc-cCccccCCCch
Confidence 34455544444 489999999999999998875543211111112111 22256998888888 778887654
Q ss_pred ---EEecChhhHHHhhccCCCccccC--CCCCCCCCCcccccC----cCCc-------chHHHHHHH-----HHhhHHHH
Q psy9807 328 ---MWLKDPSWVVNAFNVDPLYLKHD--QQGSAPDYRHWQIPL----GRRF-------RSLKLWFVL-----RLLGVKYL 386 (561)
Q Consensus 328 ---l~~r~~~~l~~~~~~~~~yl~~~--~~~~~~~~~~~~~~~----sr~~-------~al~lw~~l-----~~~g~~g~ 386 (561)
+.+++ .+. ...|+-+-.- +..+...+ ...+|. -||- .|-++.+.+ -+.|..|+
T Consensus 320 AaFfAv~~--~l~---R~mPGRiiGvtkD~~gk~a~-RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL 393 (1001)
T KOG2040|consen 320 AAFFAVSE--SLV---RMMPGRIIGVTKDALGKEAY-RLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGL 393 (1001)
T ss_pred HHHHHHHH--HHH---hhCCCceEeeeecccccHHH-HHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHH
Confidence 22221 111 1122221110 00000000 000110 1111 122222222 24589999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q psy9807 387 QEYIRKQISLAKEFEQLVRSDDRFEVIYEV 416 (561)
Q Consensus 387 ~~~~~~~~~la~~l~~~l~~~~g~~l~~~~ 416 (561)
+++.++.+.++..|...|+.. |-++.+.+
T Consensus 394 ~~IArrvh~~T~~l~~~l~~a-ghel~~k~ 422 (1001)
T KOG2040|consen 394 KEIARRVHNLTLILAEGLKNA-GHELQHKP 422 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-chhhcccc
Confidence 999999999999999999876 55665543
No 405
>PRK02769 histidine decarboxylase; Provisional
Probab=78.62 E-value=2 Score=45.00 Aligned_cols=104 Identities=16% Similarity=0.160 Sum_probs=82.3
Q ss_pred ccccc-cchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC
Q psy9807 431 PLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN 509 (561)
Q Consensus 431 ~~~~~-~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~ 509 (561)
..+|. ...+.+|..++.+|..|+++.+++.+++++++.+.|++ .+++++.+|.+++|+|+.+. ..+. .
T Consensus 267 ~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~-~g~~~~~~p~~~~v~f~~~~-----~~~~-----~ 335 (380)
T PRK02769 267 SGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQA-NGIPAWRNPNSITVVFPCPS-----ERIW-----K 335 (380)
T ss_pred cCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEcCCCceEEEEcCCC-----HHHH-----h
Confidence 44453 56789999999999999999999999999999999977 58899999999999997643 1221 3
Q ss_pred CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 510 GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 510 g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
| +.+++.. ..+|+++| ++++++.||.+++.|.+...
T Consensus 336 ~-w~l~~~~----~~~hi~~~-~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 336 K-WHLATSG----NQAHIITM-PHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred C-eeEcccC----CEEEEEEC-CCCCHHHHHHHHHHHHHHHh
Confidence 3 3343331 37999988 67788899999999887654
No 406
>KOG1411|consensus
Probab=67.45 E-value=34 Score=34.81 Aligned_cols=174 Identities=13% Similarity=0.004 Sum_probs=86.3
Q ss_pred hccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCc---cccCHHHHHHHHhhcCceEEechh
Q psy9807 214 DWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC---AFDCLEEIGQVCRQKDVWLHVDAA 287 (561)
Q Consensus 214 ~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG---~idpl~eI~~ia~~~~~~lhVDaA 287 (561)
..|..+....- ....+|.+.+-+.|.+ . ..| ..+++.+ +.-+.|| .....++|.++.++.+..-..|.|
T Consensus 165 ~ag~~~~~yrYyd~~t~gld~~g~ledl~~--~-p~g-s~ilLha-CaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmA 239 (427)
T KOG1411|consen 165 DAGLPVKFYRYYDPKTRGLDFKGMLEDLGE--A-PEG-SIILLHA-CAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMA 239 (427)
T ss_pred ccCcceeeeeeccccccccchHHHHHHHhc--C-CCC-cEEEeeh-hhcCCCCCCccHHHHHHHHHHhhhccccchhhhh
Confidence 44555444433 5667787776666654 1 122 2222222 2233333 234567788899999999999999
Q ss_pred cccccccCccc-----cccc-cCccccceeeecCCcccccc---ccceeEEecChhhHHHhh-----ccCCCccccCCCC
Q psy9807 288 YAGSAFICPEN-----RYLM-KGVELADSFNFNPHKWMLVT---FDCSAMWLKDPSWVVNAF-----NVDPLYLKHDQQG 353 (561)
Q Consensus 288 ~gg~~~~~~~~-----~~~~-~gi~~aDsi~~~~HK~l~~P---~g~g~l~~r~~~~l~~~~-----~~~~~yl~~~~~~ 353 (561)
|-|++.-.... |..+ +|. -=.++-+..|.|+.- .||=-+++++.+...+.- -..+-|-...-
T Consensus 240 YQGfaSG~~d~DA~avR~F~~~g~--~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~-- 315 (427)
T KOG1411|consen 240 YQGFASGDLDKDAQAVRLFVEDGH--EILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPL-- 315 (427)
T ss_pred hcccccCCchhhHHHHHHHHHcCC--ceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCc--
Confidence 88765432211 1111 121 124566777877632 233334455543322211 12334422111
Q ss_pred CCCCCCcccccCcCCcc-hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 354 SAPDYRHWQIPLGRRFR-SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~-al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
.++|=.. .+. -..|+..-...+.-+.++.+.+.+.+.+.|++.
T Consensus 316 ----------hGArIv~~Il~-d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~ 359 (427)
T KOG1411|consen 316 ----------HGARIVATILS-DPDLKNQWLGEVKGMADRIISMRQQLFDALEKE 359 (427)
T ss_pred ----------cchhhhhhccC-ChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcC
Confidence 0111000 000 001122223345667788888889999988874
No 407
>KOG1383|consensus
Probab=65.72 E-value=7 Score=41.07 Aligned_cols=50 Identities=16% Similarity=0.325 Sum_probs=46.3
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 441 LWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 441 ~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
-|+.+..+|.+||.+..++.++.++.+.+.|+..+++.++.+|..+++.|
T Consensus 340 ~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~ 389 (491)
T KOG1383|consen 340 QWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILF 389 (491)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEc
Confidence 59999999999999999999999999999999999999999987766655
No 408
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=63.68 E-value=17 Score=33.91 Aligned_cols=55 Identities=11% Similarity=0.025 Sum_probs=41.5
Q ss_pred hhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech
Q psy9807 232 GKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 232 ~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa 286 (561)
+++..+++.+........-++|..|-|.++.|.++|++.-+++++++|+.+|.=|
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIg 149 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIF 149 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEE
Confidence 8888888662101222344788889999999999999988899999999988643
No 409
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=51.68 E-value=1.2e+02 Score=30.43 Aligned_cols=133 Identities=12% Similarity=-0.012 Sum_probs=75.8
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.+..+.....||--+-+-+.+ | .+-++|-||.+||.+...+|-.+.+ ++ +.
T Consensus 42 l~~gGNK~RKLefll~eal~~--g------------~dTlvT~GgiQSNh~r~tAavA~~l--------Gl-------~~ 92 (323)
T COG2515 42 LAFGGNKIRKLEFLLGEALRK--G------------ADTLVTYGGIQSNHVRQTAAVAAKL--------GL-------KC 92 (323)
T ss_pred cccCccHHHHHHHHHhhhhhc--C------------CcEEEEecccchhHHHHHHHHHHhc--------CC-------cE
Confidence 455666777888766555444 2 2469999999999877776654432 11 22
Q ss_pred EEecccch-------HHHHHHhccCCeEEeeC-CCCcc--ChhhHHHHHhhhchhhcCCceEEEEEecCCCCC---cccc
Q psy9807 200 IASPACTE-------LEVVMLDWLGKMLDLPK-EFLAC--SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC---CAFD 266 (561)
Q Consensus 200 vv~~s~~s-------~~kaa~~~g~~v~~v~~-~~g~~--d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t---G~id 266 (561)
+.+.-... -.--..+.|.+++.++. .+..+ ..+.+.+.+ ++.|.+|+.|. ..|++.. |.+.
T Consensus 93 v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~-----~~~g~kpyvIp-~GG~~~~g~lGyv~ 166 (323)
T COG2515 93 VLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEV-----RKQGGKPYVIP-EGGSSPLGALGYVR 166 (323)
T ss_pred EEEEeccccccccccchhhhhhcCceEEEecCCCChhhchhhHHHHHHH-----HhcCCCCcEec-cCCcCccccccHHH
Confidence 33322211 11112456788888887 55432 334444444 34677776544 4456664 5556
Q ss_pred CHHHHHHHHhh-cCceEEechh
Q psy9807 267 CLEEIGQVCRQ-KDVWLHVDAA 287 (561)
Q Consensus 267 pl~eI~~ia~~-~~~~lhVDaA 287 (561)
-..||.+-+++ ..+-..|.++
T Consensus 167 ~a~Ei~~Q~~~~~~fD~vVva~ 188 (323)
T COG2515 167 LALEIAEQAEQLLKFDSVVVAP 188 (323)
T ss_pred HHHHHHHHHhhccCCCEEEEeC
Confidence 67777777776 3444555544
No 410
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=39.49 E-value=70 Score=31.54 Aligned_cols=64 Identities=9% Similarity=-0.115 Sum_probs=45.8
Q ss_pred CCCcc-ChhhHHHHHhhhchhhcCCceEEEEEecCCCCC-cc---ccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 225 EFLAC-SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC-CA---FDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 225 ~~g~~-d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t-G~---idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
..|.. ++++++.+++. ....|..- ++++..|++.. +. .-++..|..+.+.+++.+.+|..|.++
T Consensus 138 k~G~~~t~~e~~~Ave~--i~~~Gn~~-i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 138 KRGMGNTIEEWLYAAEY--ILSSGNGN-VILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred eCCCCCCHHHHHHHHHH--HHHcCCCc-EEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 34433 89999999987 66666433 44444456443 43 458999999998899999999999754
No 411
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=39.19 E-value=54 Score=30.74 Aligned_cols=50 Identities=10% Similarity=0.093 Sum_probs=39.8
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEE
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lh 283 (561)
.-+-|..++= .+-.|..|..|++..-+- .|.....+++.++|++||+.+.
T Consensus 140 ~GHTEasVdL--arlAGl~Pa~VicEi~~~-dG~mar~~~~~~fa~~h~l~~i 189 (203)
T COG0108 140 RGHTEAAVDL--ARLAGLKPAGVICEIMND-DGTMARLPELEEFAKEHGLPVI 189 (203)
T ss_pred CChHHHHHHH--HHHcCCCCcEEEEEEeCC-CccccChHHHHHHHHHcCCcEE
Confidence 3455666655 667889998888877655 8999999999999999998764
No 412
>COG0721 GatC Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit [Translation, ribosomal structure and biogenesis]
Probab=35.37 E-value=1.7e+02 Score=24.02 Aligned_cols=69 Identities=19% Similarity=0.278 Sum_probs=46.0
Q ss_pred HhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhc---CCCCCCCCCCcccccccCCCCCCCCCCCHHHHHHHH
Q psy9807 7 KKIKNGSIIMGDVNEFKDFAKAMVDYVGNYLENI---RDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDI 76 (561)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~ 76 (561)
|++-.=+.+.++.++...+..++-+ |.+|++++ +...|-|...+.+..+.+.+.-|..+...+++++-.
T Consensus 9 ~~la~LarL~lseee~e~~~~~l~~-Il~~veql~evD~~~vep~~~~~~~~~~lReD~~~~~~~~~~~l~na 80 (96)
T COG0721 9 KHLAKLARLELSEEELEKFATQLED-ILGYVEQLNEVDTEGVEPTTHPLEVSNVLREDEVTEGLDREELLANA 80 (96)
T ss_pred HHHHHHhhcccCHHHHHHHHHHHHH-HHHHHHHHHhccccCCCcccccccccccccCCCCCCCcCHHHHHhcC
Confidence 4455556777888877766655433 66677664 444455556666677778888888887777777643
No 413
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=34.94 E-value=89 Score=32.28 Aligned_cols=61 Identities=8% Similarity=-0.129 Sum_probs=44.2
Q ss_pred ccChhhHHHHHhhhchhhcCCceEEEEEecCC-----CCCccccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 228 ACSGGKGGGVIQRKSDREMCSDLLQVVATLGT-----TNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 228 ~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt-----t~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
.++++++..+++. -.+.|. +-++.+..|. +++=..-++..|..+.+.+++.+++|.+|+.+
T Consensus 218 ~~t~ee~~~A~e~--i~~~Gn-~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G 283 (352)
T PRK13396 218 AATIDEWLMAAEY--ILAAGN-PNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTG 283 (352)
T ss_pred CCCHHHHHHHHHH--HHHcCC-CeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCC
Confidence 3488999988877 666664 3455555544 23334468999999988889999999999863
No 414
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=33.93 E-value=57 Score=29.74 Aligned_cols=47 Identities=15% Similarity=0.146 Sum_probs=33.4
Q ss_pred ChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC--ceEEechhcc
Q psy9807 230 SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD--VWLHVDAAYA 289 (561)
Q Consensus 230 d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~--~~lhVDaA~g 289 (561)
|..+|+++++. + +-+++. .+|.+-.|+++.+..++.| +++|||=--|
T Consensus 12 ~~~~le~~les--~------~~~vfl-----L~~~i~~ik~ivk~lK~~gK~vfiHvDLv~G 60 (181)
T COG1954 12 DNKDLEKALES--E------SQYVFL-----LTGHILNIKEIVKKLKNRGKTVFIHVDLVEG 60 (181)
T ss_pred hHHHHHHHhcC--C------CeEEEE-----EechhhhHHHHHHHHHhCCcEEEEEeHHhcc
Confidence 45677888866 2 222322 2467889999999999986 7899996655
No 415
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=33.31 E-value=74 Score=29.87 Aligned_cols=50 Identities=8% Similarity=0.090 Sum_probs=38.8
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEE
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lh 283 (561)
..+-|.+++= .+-.|..|..|++...+- .|...+.+++.++|++||+.+.
T Consensus 136 ~GhtEaavdL--a~lAGl~p~avi~eil~~-dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 136 RGHTEAAVDL--ARLAGLSPVAVICEILDD-DGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp SSHHHHHHHH--HHHTTS-SBEEEEEBBET-TSSBHCHHHHHHHHHHTT-EEE
T ss_pred CChHHHHHHH--HHHhCCCCcEEEEEEeCC-CCCcCCHHHHHHHHHHcCCcEE
Confidence 3456666655 667888999888888755 8999999999999999998764
No 416
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=32.85 E-value=50 Score=33.56 Aligned_cols=57 Identities=44% Similarity=0.691 Sum_probs=51.8
Q ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC
Q psy9807 438 SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG 494 (561)
Q Consensus 438 ~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~ 494 (561)
....|..++.+|..++.+.+++..++++++.+.|++.++++++.+|..++++|+..+
T Consensus 231 ~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~ 287 (345)
T cd06450 231 ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKP 287 (345)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECC
Confidence 456788999999999999999999999999999999999998888899999999864
No 417
>TIGR00135 gatC glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit. This model has been revised to remove the candidate sequence from Methanococcus jannaschii, now part of a related model.
Probab=32.54 E-value=2.2e+02 Score=22.99 Aligned_cols=66 Identities=15% Similarity=0.313 Sum_probs=41.0
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCC---CCCCCCcccccccCCCCCCCCCCCHHHHHHH
Q psy9807 9 IKNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRR---VLPTVEPGYLRPLIPETAPDTPDTWQEVMSD 75 (561)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~ 75 (561)
+-.=+.+.++.++..++..++-+ +.+|++.+.+-. |-|-..+......+.+..|..+.+-+++++-
T Consensus 9 lA~La~L~l~eee~~~~~~~l~~-il~~~~~L~~vdt~~v~p~~~~~~~~~~lReD~~~~~~~~e~~l~n 77 (93)
T TIGR00135 9 LAKLARLELSEEEAESFAGDLDK-ILGFVEQLNEVDTENVEPMTHPLEISNVLREDEPEEPLSRDDILKN 77 (93)
T ss_pred HHHHhCCCCCHHHHHHHHHHHHH-HHHHHHHHhcCccCCCCcccCccccccCCCCCCCCCCCCHHHHHhc
Confidence 33446677888888777666544 666777665433 3343344444456667777777777777663
No 418
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=32.41 E-value=46 Score=34.68 Aligned_cols=44 Identities=16% Similarity=0.308 Sum_probs=35.3
Q ss_pred CCCCCccccCHHHHHHHHhhcCceEEec--h----hcccccccCcccccc
Q psy9807 258 GTTNCCAFDCLEEIGQVCRQKDVWLHVD--A----AYAGSAFICPENRYL 301 (561)
Q Consensus 258 gtt~tG~idpl~eI~~ia~~~~~~lhVD--a----A~gg~~~~~~~~~~~ 301 (561)
.....|.+.+++++.++||+.|+.+.|| | =|.|..++.|.....
T Consensus 150 SDY~KG~L~~~q~~I~~ar~~~~pVLvDPKg~Df~~Y~GAtLiTPN~~E~ 199 (467)
T COG2870 150 SDYAKGVLTNVQKMIDLAREAGIPVLVDPKGKDFEKYRGATLITPNLKEF 199 (467)
T ss_pred eccccccchhHHHHHHHHHHcCCcEEECCCCcchhhhCCCeecCCCHHHH
Confidence 3566799999999999999999999999 2 377777777765443
No 419
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=32.31 E-value=90 Score=28.04 Aligned_cols=44 Identities=9% Similarity=0.138 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHH
Q psy9807 126 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLG 174 (561)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ 174 (561)
...++-+.+.+|+.+.+|..-.+ .....++|+|++.++..++.+
T Consensus 93 G~~~lR~AiA~~l~~~~g~~v~~-----~pd~Ivvt~Ga~~al~~l~~~ 136 (153)
T PLN02994 93 GLANFRKAIANFMAEARGGRVKF-----DADMIVLSAGATAANEIIMFC 136 (153)
T ss_pred CcHHHHHHHHHHHHHHhCCCCcc-----chhheEEcCCHHHHHHHHHHH
Confidence 44678889999999998832110 012678999998887666554
No 420
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=31.20 E-value=55 Score=28.30 Aligned_cols=48 Identities=8% Similarity=0.034 Sum_probs=26.7
Q ss_pred ccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEec
Q psy9807 228 ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 228 ~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVD 285 (561)
.++.+.-.+.+++ --. . .|.+++++.|. .|-+++.++|+++++++..=
T Consensus 64 ~l~~~~r~~~l~~--l~~-~-~~P~iIvt~~~------~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 64 SLDEEERKERLEK--LFS-Y-NPPCIIVTRGL------EPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp CS-HHHHCCHHHH--HCT-T-T-S-EEEETTT---------HHHHHHHHHCT--EEEE
T ss_pred HCCHHHHHHHHHH--HhC-C-CCCEEEEECcC------CCCHHHHHHHHHhCCcEEEc
Confidence 6777766666665 222 2 34456665543 78899999999999987643
No 421
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=30.61 E-value=1.3e+02 Score=29.56 Aligned_cols=64 Identities=8% Similarity=-0.008 Sum_probs=43.8
Q ss_pred CCC-ccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCc-c---ccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 225 EFL-ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC-A---FDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 225 ~~g-~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG-~---idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
..| -.++++++.+++. -...|..- ++++.-|++... . .-++..|..+.+..++.+.+|.+|.++
T Consensus 128 k~G~~~t~~e~~~A~e~--i~~~Gn~~-i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G 196 (250)
T PRK13397 128 KRGLMATIEEYLGALSY--LQDTGKSN-IILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred eCCCCCCHHHHHHHHHH--HHHcCCCe-EEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCc
Confidence 345 6789999999887 66666432 333321433332 2 457888888888899999999999754
No 422
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=29.06 E-value=1.1e+02 Score=31.32 Aligned_cols=59 Identities=7% Similarity=0.113 Sum_probs=37.2
Q ss_pred CCCccChhhHHHHHhhhchhhcCCceEEEEEe--cCCCCCccc-----cCHHHHHHHHhhcCceEEec
Q psy9807 225 EFLACSGGKGGGVIQRKSDREMCSDLLQVVAT--LGTTNCCAF-----DCLEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 225 ~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t--~gtt~tG~i-----dpl~eI~~ia~~~~~~lhVD 285 (561)
...++.++..++.|++ .++.|...+.+-+- .-....|.+ .+|....++|+++|+++++-
T Consensus 17 hy~r~p~~~W~~~l~k--~ka~G~n~v~~yv~W~~he~~~g~~df~g~~dl~~f~~~a~~~gl~vilr 82 (319)
T PF01301_consen 17 HYFRIPPEYWRDRLQK--MKAAGLNTVSTYVPWNLHEPEEGQFDFTGNRDLDRFLDLAQENGLYVILR 82 (319)
T ss_dssp -GGGS-GGGHHHHHHH--HHHTT-SEEEEE--HHHHSSBTTB---SGGG-HHHHHHHHHHTT-EEEEE
T ss_pred ccccCChhHHHHHHHH--HHhCCcceEEEeccccccCCCCCcccccchhhHHHHHHHHHHcCcEEEec
Confidence 4557778888888888 88888775544442 111222333 58999999999999999887
No 423
>smart00642 Aamy Alpha-amylase domain.
Probab=28.88 E-value=35 Score=31.07 Aligned_cols=30 Identities=7% Similarity=0.171 Sum_probs=26.0
Q ss_pred CCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 260 TNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 260 t~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
...|..++++++++-||++|+.+++|-...
T Consensus 64 ~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 64 PRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 355788999999999999999999997644
No 424
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=28.57 E-value=1.5e+02 Score=26.95 Aligned_cols=56 Identities=14% Similarity=-0.035 Sum_probs=39.2
Q ss_pred ccChhhHHHHHhhhchhhcCCceEEEEEecC-------------CCCCccccCHHHHHHHHhhcCceEEec
Q psy9807 228 ACSGGKGGGVIQRKSDREMCSDLLQVVATLG-------------TTNCCAFDCLEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 228 ~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g-------------tt~tG~idpl~eI~~ia~~~~~~lhVD 285 (561)
.++.+..++.++. -++-|....++.-+.- ....+..|+|+.+.+.|+++|+-|+|-
T Consensus 16 ~~~~~~W~~~~~~--m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~G 84 (166)
T PF14488_consen 16 NWTPAQWREEFRA--MKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVG 84 (166)
T ss_pred CCCHHHHHHHHHH--HHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEe
Confidence 6777788888877 6667766554433211 111245689999999999999999875
No 425
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=27.67 E-value=1.2e+02 Score=28.66 Aligned_cols=49 Identities=10% Similarity=0.095 Sum_probs=38.6
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceE
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWL 282 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~l 282 (561)
.-+-|.+++= .+-.|..|..|++....- .|.....+++.++|++||+.+
T Consensus 141 ~GhTEaavdL--~~lAGl~p~~vicEil~~-dG~m~~~~~~~~fA~~~~l~~ 189 (199)
T TIGR00506 141 GGHTEASVDL--AELAGLKPAGVICEMMND-DGTMARKPELMEYAKKHNLKL 189 (199)
T ss_pred CChHHHHHHH--HHHcCCCceEEEEEEeCC-CCCccCHHHHHHHHHHcCCcE
Confidence 3455666655 666788898888877443 799999999999999999987
No 426
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=27.54 E-value=43 Score=32.79 Aligned_cols=29 Identities=21% Similarity=0.211 Sum_probs=24.9
Q ss_pred CccccCHHHHHHHHhhcCceEEechhccc
Q psy9807 262 CCAFDCLEEIGQVCRQKDVWLHVDAAYAG 290 (561)
Q Consensus 262 tG~idpl~eI~~ia~~~~~~lhVDaA~gg 290 (561)
.|.+.+-+++.++++++++-++||++|--
T Consensus 48 ~G~l~~~~~l~~~l~~~~i~~VIDATHPf 76 (248)
T PRK08057 48 VGGFGGAEGLAAYLREEGIDLVIDATHPY 76 (248)
T ss_pred ECCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence 46666789999999999999999999863
No 427
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=26.83 E-value=6.3e+02 Score=25.49 Aligned_cols=98 Identities=12% Similarity=-0.009 Sum_probs=56.8
Q ss_pred CCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-------chHHHHHHhccCCeEEeeCCCCc
Q psy9807 156 GGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-------TELEVVMLDWLGKMLDLPKEFLA 228 (561)
Q Consensus 156 ~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-------~s~~kaa~~~g~~v~~v~~~~g~ 228 (561)
+..++|-|-|-+.+..+..|++. +.++.|++.+ .-..|..+-.|..+..|+
T Consensus 120 g~~IlTh~~S~~v~~~l~~A~~~-----------------~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~----- 177 (301)
T COG1184 120 GDVILTHSFSKTVLEVLKTAADR-----------------GKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV----- 177 (301)
T ss_pred CCEEEEecCcHHHHHHHHHhhhc-----------------CCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe-----
Confidence 46788888777777777777654 2345666665 222333334567777666
Q ss_pred cChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc-cC--HHHHHHHHhhcCceEEec
Q psy9807 229 CSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF-DC--LEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 229 ~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i-dp--l~eI~~ia~~~~~~lhVD 285 (561)
| .+....+++ .-.+++...+-+..|.+ +- -..|+..||+.+.++.|=
T Consensus 178 -D-sa~~~~~~~--------vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 178 -D-SAVGAFMSR--------VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred -c-hHHHHHHHh--------CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 1 233334444 22345555555555433 21 245677889999988764
No 428
>PF12162 STAT1_TAZ2bind: STAT1 TAZ2 binding domain; InterPro: IPR022752 This entry represents the C-terminal domain of STAT1, which selectively binds the TAZ2 domain of CRB (CREB-binding protein) []. This group of eukaryotic proteins is approximately 20 amino acids in length, and is found in association with PF02865 from PFAM, PF00017 from PFAM, PF01017 from PFAM, PF02864 from PFAM. By binding to CRB, it becomes a transcriptional activator and can initiate transcription of certain genes. ; GO: 0003700 sequence-specific DNA binding transcription factor activity; PDB: 2KA6_B.
Probab=26.24 E-value=74 Score=18.60 Aligned_cols=16 Identities=0% Similarity=0.349 Sum_probs=9.3
Q ss_pred CCCCCCCHHHHHHHHH
Q psy9807 12 GSIIMGDVNEFKDFAK 27 (561)
Q Consensus 12 ~~~~~~~~~~~~~~~~ 27 (561)
-..++|++++|+++-+
T Consensus 5 dnmmPMSPddy~~l~~ 20 (23)
T PF12162_consen 5 DNMMPMSPDDYDELER 20 (23)
T ss_dssp TS---S-HHHHHHHHH
T ss_pred hcccCCCHHHHHHHHH
Confidence 3578999999998754
No 429
>KOG0630|consensus
Probab=26.08 E-value=72 Score=34.03 Aligned_cols=50 Identities=26% Similarity=0.385 Sum_probs=45.6
Q ss_pred cccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhh
Q psy9807 432 LGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 481 (561)
Q Consensus 432 ~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~ 481 (561)
+.++++.+-+|-.+..+|.+++.+.+...+.+++-+.+.+...++.|++.
T Consensus 391 ~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig 440 (838)
T KOG0630|consen 391 LREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIG 440 (838)
T ss_pred HHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEec
Confidence 35778999999999999999999999999999999999999999888754
No 430
>KOG3413|consensus
Probab=25.67 E-value=82 Score=27.80 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=27.6
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy9807 11 NGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRR 44 (561)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (561)
.++--..+..+|.+++..++|.+.+|++++.+..
T Consensus 36 ~~~~~~~t~~~YhrlAddTLd~L~d~fEdl~e~~ 69 (156)
T KOG3413|consen 36 LFHSGILTRLEYHRLADDTLDHLSDYFEDLAEEV 69 (156)
T ss_pred cCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3444556778999999999999999999986544
No 431
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=25.29 E-value=1.2e+02 Score=31.50 Aligned_cols=64 Identities=5% Similarity=-0.155 Sum_probs=44.8
Q ss_pred CCCc-cChhhHHHHHhhhchhhcCCceEEEEEecCCCCCc---cc-cCHHHHHHHHhhcCceEEechhcccc
Q psy9807 225 EFLA-CSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC---AF-DCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 225 ~~g~-~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG---~i-dpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
..|. .++++++.+++. ....|... ++++-.|++... .- -+|..|..+.+++++.+.+|..|.++
T Consensus 231 k~G~~~t~~e~~~Ave~--i~~~Gn~~-i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 231 KRGLSATIEEFIYAAEY--IMSQGNGQ-IILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred eCCCCCCHHHHHHHHHH--HHHCCCCC-EEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 4454 689999999987 66667533 343432554322 11 38999999999899999999999754
No 432
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=25.01 E-value=51 Score=32.29 Aligned_cols=30 Identities=13% Similarity=0.068 Sum_probs=24.3
Q ss_pred CCccccCHHHHHHHHhhcCceEEechhccc
Q psy9807 261 NCCAFDCLEEIGQVCRQKDVWLHVDAAYAG 290 (561)
Q Consensus 261 ~tG~idpl~eI~~ia~~~~~~lhVDaA~gg 290 (561)
..|.+-+.+++.++|+++++-++||++|--
T Consensus 48 ~~G~lg~~~~l~~~l~~~~i~~vIDATHPf 77 (249)
T PF02571_consen 48 RVGRLGDEEGLAEFLRENGIDAVIDATHPF 77 (249)
T ss_pred EECCCCCHHHHHHHHHhCCCcEEEECCCch
Confidence 345555778999999999999999999863
No 433
>PF05670 DUF814: Domain of unknown function (DUF814); InterPro: IPR008532 This domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity. This annotation comes from O34693 from SWISSPROT where the N-terminal region is involved in this activity []. Hence the activity of this C-terminal domain is unknown. This domain contains a conserved motif D/E-X-W/Y-X-H that may be functionally important.
Probab=24.74 E-value=18 Score=29.21 Aligned_cols=24 Identities=25% Similarity=0.502 Sum_probs=17.7
Q ss_pred HHH-HHHHhhcCceEEechhccccc
Q psy9807 269 EEI-GQVCRQKDVWLHVDAAYAGSA 292 (561)
Q Consensus 269 ~eI-~~ia~~~~~~lhVDaA~gg~~ 292 (561)
+.| .++++..++|+|+|+-=|...
T Consensus 20 e~L~~k~~~~~D~wfH~~~~pg~hv 44 (90)
T PF05670_consen 20 EMLTKKYARPNDLWFHADDFPGPHV 44 (90)
T ss_pred HHHHHHhhhhcceeEeccCCCCCEE
Confidence 344 678899999999997555433
No 434
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=24.54 E-value=1e+02 Score=28.38 Aligned_cols=57 Identities=12% Similarity=0.177 Sum_probs=42.6
Q ss_pred eEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 219 MLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 219 v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
++.|+ |+-|...|.++++. -++.|-|+.. ...-++.|.+..++.|+.+..|.=++|-
T Consensus 5 vIVVE---GK~D~~~lk~~~d~-----------~~I~T~Gs~i--~~~~i~~i~~~~~~rgVIIfTDpD~~Ge 61 (174)
T TIGR00334 5 IIVVE---GKDDQARIKQAFDV-----------DVIETNGSAL--KDETINLIKKAQKKQGVIILTDPDFPGE 61 (174)
T ss_pred EEEEe---cchHHHHHHHhcCc-----------eEEEECCCcc--CHHHHHHHHHHhhcCCEEEEeCCCCchH
Confidence 45555 78888888888754 2667777664 3356788888889999999999888764
No 435
>PRK11633 cell division protein DedD; Provisional
Probab=24.19 E-value=4e+02 Score=25.67 Aligned_cols=51 Identities=18% Similarity=0.283 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhCCc-EEEEeee-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 497 EINEKLLKRINGNGK-IHLVPSK-IRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 497 ~~~~~l~~~L~~~g~-~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
+-.+.+.++|...|. .++.+.. .+| .+.|+- .+++.++++.++++..|+++
T Consensus 161 ~~A~~l~~kL~~~G~~Ay~~~~~~~~G-~~tRV~-VGP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 161 DKVNEIVAKLRLSGYRVYTVPSTPVQG-KITRIY-VGPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHHHCCCeeEEEeeecCCC-cEEEEE-eCCCCCHHHHHHHHHHHHHh
Confidence 345689999999986 4444333 344 366775 44898999999999988875
No 436
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=23.62 E-value=46 Score=32.99 Aligned_cols=33 Identities=6% Similarity=0.103 Sum_probs=28.6
Q ss_pred cCCCCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 257 LGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 257 ~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
...+..|..++++++++.||++|+.|++|-...
T Consensus 43 ~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 43 AVDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp EESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred ccccccchhhhhhhhhhccccccceEEEeeecc
Confidence 356677889999999999999999999997643
No 437
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=23.47 E-value=1e+02 Score=30.05 Aligned_cols=30 Identities=20% Similarity=0.185 Sum_probs=24.9
Q ss_pred CccccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 262 CCAFDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 262 tG~idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
.|-.-.-+++.++.+++++-+.||++|--.
T Consensus 49 ~~G~l~~e~l~~~l~e~~i~llIDATHPyA 78 (257)
T COG2099 49 VGGFLGAEGLAAFLREEGIDLLIDATHPYA 78 (257)
T ss_pred ecCcCCHHHHHHHHHHcCCCEEEECCChHH
Confidence 344556799999999999999999998643
No 438
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=23.33 E-value=3e+02 Score=28.76 Aligned_cols=49 Identities=10% Similarity=-0.130 Sum_probs=31.4
Q ss_pred CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc-CHHHHHHHHhhcCceEEec
Q psy9807 225 EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD-CLEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 225 ~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id-pl~eI~~ia~~~~~~lhVD 285 (561)
.+-.-|++.|++.++. . .|.+|.+-.++ .+ ++++++++|++||..+.+=
T Consensus 197 g~~~kD~eVLeaaLe~--~--~G~kpLL~SAt--------~e~Ny~~ia~lAk~yg~~Vvv~ 246 (389)
T TIGR00381 197 GNPEKDPLVLEKAAEV--A--EGERCLLASAN--------LDLDYEKIANAAKKYGHVVLSW 246 (389)
T ss_pred CCCcCCHHHHHHHHHH--h--CCCCcEEEecC--------chhhHHHHHHHHHHhCCeEEEE
Confidence 3446678888888866 2 34455443332 23 7888888888888766554
No 439
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=23.22 E-value=1.5e+02 Score=28.29 Aligned_cols=51 Identities=10% Similarity=-0.016 Sum_probs=38.2
Q ss_pred hHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechh
Q psy9807 233 KGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAA 287 (561)
Q Consensus 233 ~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA 287 (561)
+=|.+++= .+-.|..|..|++.... ..|...+.+++.++|++||+.+ |+..
T Consensus 153 htEaavdL--a~lAgl~P~avi~ei~~-~~G~~~~~~~~~~fA~~~~l~~-v~i~ 203 (217)
T PRK03353 153 HTEATIDL--MTLAGLKPAGVLCELTN-DDGTMARAPECIAFAKQHNMPV-LTIE 203 (217)
T ss_pred chHHHHHH--HHHcCCCceEEEEEeec-CCCCcccHHHHHHHHHHcCCcE-EEHH
Confidence 34555544 55677788888887633 4588999999999999999988 6643
No 440
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=22.69 E-value=90 Score=31.50 Aligned_cols=52 Identities=13% Similarity=0.007 Sum_probs=42.6
Q ss_pred CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 225 EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 225 ~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
++|.+|.+++++.++. ..+.|-.-.+++.|.|...+=+.+.=.++.+.+.+.
T Consensus 18 ~dg~vD~~a~~~lv~~--li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~ 69 (299)
T COG0329 18 EDGSVDEEALRRLVEF--LIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEA 69 (299)
T ss_pred CCCCcCHHHHHHHHHH--HHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHH
Confidence 5688999999999988 777776667777888888888888888888888775
No 441
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=22.68 E-value=1.6e+02 Score=29.79 Aligned_cols=53 Identities=17% Similarity=-0.033 Sum_probs=35.2
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
.+....++++ +.+.| ...+|+.+.|....| -.+.+.++|+++|+.+.==.+.|
T Consensus 79 a~~v~~al~e--~~~~G-vk~~vIisaGf~e~g---~~~~~~~~ar~~girviGPNc~G 131 (300)
T PLN00125 79 PPFAAAAILE--AMEAE-LDLVVCITEGIPQHD---MVRVKAALNRQSKTRLIGPNCPG 131 (300)
T ss_pred HHHHHHHHHH--HHHcC-CCEEEEECCCCCccc---HHHHHHHHHhhcCCEEECCCCce
Confidence 4455555555 44444 566889999998887 33555667899999876555554
No 442
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=22.59 E-value=1.2e+02 Score=32.84 Aligned_cols=41 Identities=15% Similarity=0.242 Sum_probs=36.4
Q ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhh
Q psy9807 438 SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 480 (561)
Q Consensus 438 ~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~ 480 (561)
.++.|..++.+|.+|+++..++.+++++++++.|++. ++++
T Consensus 332 ~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~ 372 (481)
T PRK04366 332 LVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLP 372 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--Cccc
Confidence 4689999999999999999999999999999999887 4544
No 443
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=22.35 E-value=55 Score=35.46 Aligned_cols=31 Identities=10% Similarity=-0.019 Sum_probs=27.7
Q ss_pred CCCCCccccCHHHHHHHHhhcCceEEechhc
Q psy9807 258 GTTNCCAFDCLEEIGQVCRQKDVWLHVDAAY 288 (561)
Q Consensus 258 gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~ 288 (561)
..+..|.-++|+++++-||++|+.+++|..+
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3567789999999999999999999999874
No 444
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=21.99 E-value=2.2e+02 Score=27.94 Aligned_cols=77 Identities=13% Similarity=0.024 Sum_probs=49.7
Q ss_pred chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcc---ccCHHHHHHHHhhcCceE
Q psy9807 206 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCA---FDCLEEIGQVCRQKDVWL 282 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~---idpl~eI~~ia~~~~~~l 282 (561)
+.+.+++--. .+.+.++ ....++++++..+++. ..+.| .+-++.+.=|+|. |. +-|+..|.-+.+ .++++
T Consensus 106 ~~LL~a~g~t-~kpV~lK-rG~~~t~~e~l~aaey--i~~~G-n~~viLcERG~tf-~y~r~~~D~~~ip~~k~-~~~PV 178 (258)
T TIGR01362 106 TDLLVAAAKT-GRIVNVK-KGQFLSPWDMKNVVEK--VLSTG-NKNILLCERGTSF-GYNNLVVDMRSLPIMRE-LGCPV 178 (258)
T ss_pred HHHHHHHhcc-CCeEEec-CCCcCCHHHHHHHHHH--HHHcC-CCcEEEEeCCCCc-CCCCcccchhhhHHHHh-cCCCE
Confidence 5555554222 2333333 3345788888888777 66667 4556777777754 55 458888876644 58999
Q ss_pred Eechhcc
Q psy9807 283 HVDAAYA 289 (561)
Q Consensus 283 hVDaA~g 289 (561)
++|.+|+
T Consensus 179 i~DpSHs 185 (258)
T TIGR01362 179 IFDATHS 185 (258)
T ss_pred EEeCCcc
Confidence 9999997
No 445
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=21.93 E-value=1.5e+02 Score=29.76 Aligned_cols=52 Identities=12% Similarity=-0.049 Sum_probs=34.9
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
.+...+++++ +.+.| ...+|+.+.|.... .-++|.++|+++|+.+.==.+.|
T Consensus 73 a~~v~~~l~e--~~~~G-vk~avIis~Gf~e~----~~~~l~~~a~~~girilGPNc~G 124 (286)
T TIGR01019 73 APFAADAIFE--AIDAG-IELIVCITEGIPVH----DMLKVKRYMEESGTRLIGPNCPG 124 (286)
T ss_pred HHHHHHHHHH--HHHCC-CCEEEEECCCCCHH----HHHHHHHHHHHcCCEEECCCCce
Confidence 4455555655 55545 55778888886443 34789999999998886444544
No 446
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=21.90 E-value=2.6e+02 Score=29.94 Aligned_cols=56 Identities=16% Similarity=0.040 Sum_probs=39.5
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCcc--ccCHHHHHHHHhhcCceEEechhcc
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCA--FDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~--idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
.+...+.+++ +.+.| ...+|+.+.|....|. ...-+++.++|+++|+.+.=-.+.|
T Consensus 74 ~~~~~~~l~e--~~~~g-v~~~vi~s~gf~e~g~~g~~~~~~l~~~a~~~girvlGPnc~G 131 (447)
T TIGR02717 74 AKYVPQVVEE--CGEKG-VKGAVVITAGFKEVGEEGAELEQELVEIARKYGMRLLGPNCLG 131 (447)
T ss_pred HHHHHHHHHH--HHhcC-CCEEEEECCCccccCcchHHHHHHHHHHHHHcCCEEEecCeee
Confidence 5556666666 55555 4567788888888773 1223789999999999988777765
No 447
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=21.87 E-value=1.2e+02 Score=30.20 Aligned_cols=52 Identities=15% Similarity=-0.010 Sum_probs=39.2
Q ss_pred CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 225 EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 225 ~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
+++.+|.+.+++.++. ..+.|-...++..++|....=..+.-.++.+.+.++
T Consensus 14 ~dg~iD~~~~~~~i~~--l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 14 DDGSVDFDALERLIEF--QIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred CCCCcCHHHHHHHHHH--HHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 7899999999999988 777776666666666666665667777777766655
No 448
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=21.82 E-value=1.5e+02 Score=25.00 Aligned_cols=48 Identities=15% Similarity=0.076 Sum_probs=36.5
Q ss_pred CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEe
Q psy9807 227 LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHV 284 (561)
Q Consensus 227 g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhV 284 (561)
..++++.|++.+.+ .|-.+++ ||-.+|.+.=.++..+++++.++-+.+
T Consensus 47 Hkl~~eEle~~lee--------~~E~ivv--GTG~~G~l~l~~ea~e~~r~k~~~vi~ 94 (121)
T COG1504 47 HKLALEELEELLEE--------GPEVIVV--GTGQSGMLELSEEAREFFRKKGCEVIE 94 (121)
T ss_pred cccCHHHHHHHHhc--------CCcEEEE--ecCceeEEEeCHHHHHHHHhcCCeEEE
Confidence 47899999999988 3433443 566778888888999999999865544
No 449
>PRK12821 aspartyl/glutamyl-tRNA amidotransferase subunit C-like protein; Provisional
Probab=21.74 E-value=4.1e+02 Score=28.37 Aligned_cols=67 Identities=10% Similarity=0.123 Sum_probs=42.4
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCCCCcc-cccccCCCCCCCCCCCHHHHHHH
Q psy9807 8 KIKNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRD---RRVLPTVEPG-YLRPLIPETAPDTPDTWQEVMSD 75 (561)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~il~~ 75 (561)
++-.=+.+..+.||..++.++.-+ +.+|++++.+ ..|-|-..|. .....+.+..|.++.+-+++++.
T Consensus 396 KLAkLARLeLSEEElEkl~~dLn~-ILdyVEkLnEVDTegVEPM~hp~e~~~nvLREDeV~~sl~rEeaLsN 466 (477)
T PRK12821 396 KLARLVMFDLDDAELEKLQVEFKD-ITSSFKQVEKIDTTNVKPMYAPFSNSPTPLRKDKDVVQKHQKILLKN 466 (477)
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHH-HHHHHHHHcccCcCCCCCcccCcccccCCCCCCCCCCCCCHHHHHhc
Confidence 333445666888887777666544 6677776544 4454544453 45566777778887777777764
No 450
>PF03599 CdhD: CO dehydrogenase/acetyl-CoA synthase delta subunit; InterPro: IPR016041 This entry represents a conserved region predicted to form a TIM alpha/beta barrel, and is found in the delta subunit of a number of CO dehydrogenase/acetyl-CoA synthase enzymes.; PDB: 2H9A_B 2YCL_B 4DJF_E 4DJD_C 4DJE_C.
Probab=21.67 E-value=1.5e+02 Score=30.91 Aligned_cols=44 Identities=11% Similarity=-0.000 Sum_probs=22.5
Q ss_pred ChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEec
Q psy9807 230 SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 230 d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVD 285 (561)
|++.|+++++. . .+.+|.+-.+|. ++.++++++|++||..+.+=
T Consensus 107 D~evl~aale~--~--~~~kpLL~aAt~--------eNyk~m~~lA~~y~~pl~v~ 150 (386)
T PF03599_consen 107 DPEVLKAALEA--C--AGKKPLLYAATE--------ENYKAMAALAKEYGHPLIVS 150 (386)
T ss_dssp HHHHHHHHHHH--T--TTS--EEEEEBT--------TTHHHHHHHHHHCT-EEEEE
T ss_pred CHHHHHHHHHH--h--CcCCcEEeEcCH--------HHHHHHHHHHHHcCCeEEEE
Confidence 56666666644 2 334554444432 45666666666666665553
No 451
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=21.49 E-value=1.5e+02 Score=30.16 Aligned_cols=19 Identities=26% Similarity=0.366 Sum_probs=18.0
Q ss_pred ccCHHHHHHHHhhcCceEE
Q psy9807 265 FDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 265 idpl~eI~~ia~~~~~~lh 283 (561)
.|||+.+.+.||++|+-+|
T Consensus 69 ~DpL~~~I~eaHkrGlevH 87 (311)
T PF02638_consen 69 FDPLEFMIEEAHKRGLEVH 87 (311)
T ss_pred ccHHHHHHHHHHHcCCEEE
Confidence 8999999999999999887
No 452
>KOG0622|consensus
Probab=21.42 E-value=6.9e+02 Score=26.40 Aligned_cols=79 Identities=15% Similarity=0.148 Sum_probs=38.3
Q ss_pred cceEEeccc---chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCc--------cc
Q psy9807 197 ANLIASPAC---TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC--------AF 265 (561)
Q Consensus 197 ~~~vv~~s~---~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG--------~i 265 (561)
+.=+||++. .|..|-|...|+.+-++. ..+.|.+.-+. ... -+..+-+++--++.+| ..
T Consensus 123 P~riIyanpcK~~s~IkyAa~~gV~~~tfD------ne~el~kv~~~--hP~--a~llLrIatdds~a~~~l~~KFG~~~ 192 (448)
T KOG0622|consen 123 PERIIYANPCKQVSQIKYAAKHGVSVMTFD------NEEELEKVAKS--HPN--ANLLLRIATDDSTATCRLNLKFGCSL 192 (448)
T ss_pred hHHeEecCCCccHHHHHHHHHcCCeEEeec------CHHHHHHHHHh--CCC--ceEEEEEccCCCcccccccCccCCCH
Confidence 344566665 455555555666666555 23344443322 100 0122333333333333 34
Q ss_pred cCHHHHHHHHhhcC-----ceEEec
Q psy9807 266 DCLEEIGQVCRQKD-----VWLHVD 285 (561)
Q Consensus 266 dpl~eI~~ia~~~~-----~~lhVD 285 (561)
+.++.+.+.+|+++ +.+||=
T Consensus 193 ~~~~~lLd~ak~l~lnvvGvsfHvG 217 (448)
T KOG0622|consen 193 DNCRHLLDMAKELELNVVGVSFHVG 217 (448)
T ss_pred HHHHHHHHHHHHcCceEEEEEEEec
Confidence 56777777777764 445654
No 453
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=21.19 E-value=6.3e+02 Score=27.90 Aligned_cols=107 Identities=12% Similarity=-0.004 Sum_probs=59.6
Q ss_pred CCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE-ecc----c-chHHHHHHhccCCeEEeeCCCCcc
Q psy9807 156 GGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA-SPA----C-TELEVVMLDWLGKMLDLPKEFLAC 229 (561)
Q Consensus 156 ~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv-~~s----~-~s~~kaa~~~g~~v~~v~~~~g~~ 229 (561)
..|+|.|||-.+.++|-.+++..-... .....| +.. + .-..+++...|...+.+. +
T Consensus 232 pvg~~lSGGlDSS~Iaa~a~~~~~~~~-------------~~~fsvg~~~~~~~D~~~a~~~A~~lg~~h~~~~-----~ 293 (542)
T COG0367 232 PVGVFLSGGLDSSLIAAIAAEELGKEG-------------KTTFTVGFEDSDSPDAKYARAVAKFLGTPHHEII-----L 293 (542)
T ss_pred cEEEEeCCCccHHHHHHHHHHhccccc-------------eeeeEeecCCCCCchHHHHHHHHHHhCCCcEEEe-----e
Confidence 378999999999887777655421000 000011 111 1 112233444444444333 3
Q ss_pred ChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech--h---cccc
Q psy9807 230 SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA--A---YAGS 291 (561)
Q Consensus 230 d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa--A---~gg~ 291 (561)
..+++.+++.+ - |...-.....++..|+--+++.+++++.++...| | +||.
T Consensus 294 ~~~e~~~~~~~--v---------v~~~~~p~~~~~~~ply~~~~~a~~~g~kVvLSGeGADElFgGY 349 (542)
T COG0367 294 TNEELLNALPE--V---------VKALDTPGGMAASIPLYLLSRKARAEGEKVVLSGEGADELFGGY 349 (542)
T ss_pred cHHHHHHHHHH--H---------HhhcCCCCcccchhHHHHHHHhhhhcCcEEeecCccHHHHhcCC
Confidence 46677776655 1 1111222225677899999999999999988864 3 6665
No 454
>PRK00685 metal-dependent hydrolase; Provisional
Probab=20.83 E-value=5.2e+02 Score=24.22 Aligned_cols=58 Identities=9% Similarity=-0.127 Sum_probs=40.8
Q ss_pred hccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 214 DWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 214 ~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
..+..+..+|+ ...+|++++..+..+. - .|..++.++-.+......+.+++.+.+++.
T Consensus 155 ~~~~D~~~~~~~~~~h~~~~ea~~~~~~--~-----~~k~~v~~H~~~~~~~~~~~~~~~~~~~~~ 213 (228)
T PRK00685 155 LHKPDVALLPIGDNFTMGPEDAALAVEL--I-----KPKIVIPMHYNTFPLIEQDPEKFKALVEGL 213 (228)
T ss_pred hhCCCEEEEecCCccccCHHHHHHHHHh--h-----CCCEEEEeccCCCcCCcCCHHHHHHHHHhc
Confidence 34567777887 5678998887777655 2 466788888766554445778888888763
No 455
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=20.20 E-value=2.9e+02 Score=30.00 Aligned_cols=66 Identities=11% Similarity=-0.144 Sum_probs=46.6
Q ss_pred cc-CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc--CceEEechhccc
Q psy9807 215 WL-GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK--DVWLHVDAAYAG 290 (561)
Q Consensus 215 ~g-~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~--~~~lhVDaA~gg 290 (561)
.| .+|..+......++.+++.+.|.+ . .|-+|.+|+ .+..+....++++.+|+. ++.+++=|.|..
T Consensus 35 ~G~~~V~iiD~~~~~~~~~~~~~~l~~--~-----~pdvVgis~---~t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 35 AGYHDVTFLDAMTGPLTDEKLVERLRA--H-----CPDLVLITA---ITPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred cCCcceEEecccccCCCHHHHHHHHHh--c-----CcCEEEEec---CcccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 45 467777764456777888887765 2 566666653 344667778899988887 889988887753
No 456
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=20.16 E-value=2e+02 Score=27.51 Aligned_cols=50 Identities=10% Similarity=0.001 Sum_probs=37.5
Q ss_pred hHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech
Q psy9807 233 KGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 233 ~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa 286 (561)
+-|..++= .+-.|..|..|++.... ..|.....+++.++|++||+.+ ++.
T Consensus 154 HTEaavdL--a~lAGl~p~~vicEil~-~dG~ma~~~~l~~fA~~h~l~~-isi 203 (218)
T PRK00910 154 HTEGTVDL--MQMAGLQPAGVLCELTN-PDGTMAKTPEIIAFGKLHNMPV-LTI 203 (218)
T ss_pred ccHHHHHH--HHHcCCCceEEEEEEec-CCCCcCCHHHHHHHHHHcCCcE-EEH
Confidence 34555544 55677788888887744 4599999999999999999987 543
Done!