Query psy9807
Match_columns 561
No_of_seqs 350 out of 2955
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 20:12:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9807.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9807hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k40_A Aromatic-L-amino-acid d 100.0 2.8E-75 9.5E-80 627.1 47.5 470 17-556 1-474 (475)
2 4e1o_A HDC, histidine decarbox 100.0 1.1E-74 3.6E-79 624.0 50.6 474 12-554 1-479 (481)
3 1js3_A DDC;, DOPA decarboxylas 100.0 1.5E-66 5.3E-71 561.6 50.4 474 17-559 1-480 (486)
4 3vp6_A Glutamate decarboxylase 100.0 4.3E-64 1.5E-68 544.7 50.9 472 17-555 19-507 (511)
5 2okj_A Glutamate decarboxylase 100.0 2.8E-61 9.5E-66 522.8 50.3 470 17-553 16-502 (504)
6 2qma_A Diaminobutyrate-pyruvat 100.0 9.3E-60 3.2E-64 510.0 49.5 465 7-552 20-495 (497)
7 2jis_A Cysteine sulfinic acid 100.0 1.5E-59 5.2E-64 510.3 46.3 473 11-552 28-514 (515)
8 2dgk_A GAD-beta, GADB, glutama 100.0 4.5E-45 1.5E-49 390.3 41.4 410 51-556 7-437 (452)
9 3hbx_A GAD 1, glutamate decarb 100.0 5.9E-43 2E-47 378.3 41.6 414 45-555 14-446 (502)
10 3mc6_A Sphingosine-1-phosphate 100.0 3.7E-37 1.3E-41 332.9 34.5 390 58-555 34-439 (497)
11 3mad_A Sphingosine-1-phosphate 100.0 7.4E-37 2.5E-41 331.9 33.1 393 60-557 69-473 (514)
12 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 4.7E-38 1.6E-42 328.6 16.1 300 60-416 21-349 (450)
13 2z67_A O-phosphoseryl-tRNA(SEC 100.0 5.8E-33 2E-37 296.7 26.5 333 19-425 31-388 (456)
14 3f9t_A TDC, L-tyrosine decarbo 100.0 1.4E-30 4.9E-35 271.5 40.2 380 61-550 4-395 (397)
15 1wyu_B Glycine dehydrogenase s 100.0 8.5E-26 2.9E-30 242.4 35.0 393 51-552 31-440 (474)
16 3nnk_A Ureidoglycine-glyoxylat 99.9 3.3E-25 1.1E-29 232.6 27.7 354 87-553 9-390 (411)
17 3isl_A Purine catabolism prote 99.9 3.3E-25 1.1E-29 232.9 25.9 353 87-553 7-390 (416)
18 4hvk_A Probable cysteine desul 99.9 5.9E-24 2E-28 220.1 32.2 342 92-555 3-375 (382)
19 3ffr_A Phosphoserine aminotran 99.9 5.7E-25 2E-29 226.4 23.4 343 92-549 5-360 (362)
20 3hl2_A O-phosphoseryl-tRNA(SEC 99.9 9E-25 3.1E-29 225.0 24.0 241 128-414 116-365 (501)
21 2z9v_A Aspartate aminotransfer 99.9 1.8E-23 6.2E-28 218.0 31.1 349 88-553 7-371 (392)
22 4eb5_A Probable cysteine desul 99.9 3.6E-23 1.2E-27 214.7 32.1 273 92-416 3-284 (382)
23 1wyu_A Glycine dehydrogenase ( 99.9 4.4E-23 1.5E-27 219.0 33.3 369 51-549 31-436 (438)
24 3e9k_A Kynureninase; kynurenin 99.9 3.7E-24 1.3E-28 229.0 23.9 353 91-552 69-460 (465)
25 2dr1_A PH1308 protein, 386AA l 99.9 1.6E-23 5.5E-28 217.6 28.0 349 90-555 20-381 (386)
26 3kgw_A Alanine-glyoxylate amin 99.9 1.1E-23 3.6E-28 219.4 25.4 352 88-553 20-388 (393)
27 3lvm_A Cysteine desulfurase; s 99.9 1.3E-22 4.6E-27 213.7 33.1 285 91-425 24-324 (423)
28 3zrp_A Serine-pyruvate aminotr 99.9 3.2E-23 1.1E-27 215.1 27.4 318 123-553 29-363 (384)
29 1kmj_A Selenocysteine lyase; p 99.9 2.2E-22 7.5E-27 210.4 33.3 353 91-552 25-404 (406)
30 2huf_A Alanine glyoxylate amin 99.9 6.4E-23 2.2E-27 213.9 28.1 349 90-553 18-383 (393)
31 3e77_A Phosphoserine aminotran 99.9 8.5E-24 2.9E-28 218.5 20.6 342 93-552 16-374 (377)
32 2yrr_A Aminotransferase, class 99.9 3.6E-23 1.2E-27 212.0 25.2 316 123-551 27-351 (353)
33 1iug_A Putative aspartate amin 99.9 7.7E-23 2.6E-27 209.8 26.8 313 123-553 28-348 (352)
34 3vax_A Putative uncharacterize 99.9 3.7E-23 1.3E-27 216.2 24.2 289 88-425 19-323 (400)
35 1t3i_A Probable cysteine desul 99.9 4.3E-22 1.5E-26 209.3 32.1 352 91-553 30-413 (420)
36 1vjo_A Alanine--glyoxylate ami 99.9 8.6E-23 2.9E-27 213.1 25.4 343 92-550 36-392 (393)
37 1eg5_A Aminotransferase; PLP-d 99.9 8.7E-22 3E-26 204.3 32.7 343 91-555 3-378 (384)
38 3f0h_A Aminotransferase; RER07 99.9 6.6E-23 2.3E-27 212.5 23.9 317 123-551 46-372 (376)
39 3m5u_A Phosphoserine aminotran 99.9 8.1E-23 2.8E-27 210.4 23.8 333 92-552 6-359 (361)
40 3qm2_A Phosphoserine aminotran 99.9 1.1E-23 3.7E-28 218.9 17.2 337 90-552 27-384 (386)
41 2ch1_A 3-hydroxykynurenine tra 99.9 3.1E-22 1.1E-26 208.9 26.1 349 88-553 15-383 (396)
42 2bkw_A Alanine-glyoxylate amin 99.9 4.3E-22 1.5E-26 206.8 24.5 350 90-551 4-382 (385)
43 2w8t_A SPT, serine palmitoyltr 99.9 1.9E-21 6.6E-26 205.6 29.6 300 128-554 108-416 (427)
44 1svv_A Threonine aldolase; str 99.9 1.1E-21 3.9E-26 201.4 26.8 330 92-552 17-357 (359)
45 1v72_A Aldolase; PLP-dependent 99.9 1.5E-22 5.2E-27 207.9 19.4 301 128-553 42-353 (356)
46 3cai_A Possible aminotransfera 99.9 1.4E-21 4.9E-26 204.7 26.8 341 90-549 27-405 (406)
47 1m32_A 2-aminoethylphosphonate 99.9 1.3E-21 4.5E-26 201.4 24.9 312 129-551 37-363 (366)
48 1elu_A L-cysteine/L-cystine C- 99.9 2.1E-21 7.3E-26 201.9 26.6 314 124-549 54-388 (390)
49 1qz9_A Kynureninase; kynurenin 99.9 1E-20 3.5E-25 198.9 29.3 308 129-552 71-401 (416)
50 3ke3_A Putative serine-pyruvat 99.9 4.2E-21 1.4E-25 199.8 23.2 318 123-554 29-377 (379)
51 3tqx_A 2-amino-3-ketobutyrate 99.9 1.2E-20 4.2E-25 196.9 26.0 298 128-552 87-395 (399)
52 3dzz_A Putative pyridoxal 5'-p 99.9 2.1E-20 7.4E-25 194.5 27.1 330 102-552 42-388 (391)
53 3a9z_A Selenocysteine lyase; P 99.9 4.2E-20 1.4E-24 195.3 27.9 289 89-413 18-331 (432)
54 2fnu_A Aminotransferase; prote 99.9 3.3E-20 1.1E-24 191.9 26.0 238 132-415 35-275 (375)
55 1j32_A Aspartate aminotransfer 99.9 5.4E-20 1.8E-24 191.6 27.6 324 107-553 49-387 (388)
56 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 2E-21 6.9E-26 200.8 15.8 244 128-424 52-306 (371)
57 2fyf_A PSAT, phosphoserine ami 99.9 1.2E-20 4E-25 197.6 21.1 308 122-551 71-396 (398)
58 1b9h_A AHBA synthase, protein 99.9 3.4E-19 1.1E-23 185.6 30.8 254 109-414 22-280 (388)
59 3nra_A Aspartate aminotransfer 99.9 3.1E-20 1.1E-24 194.5 22.8 312 121-553 74-405 (407)
60 2gb3_A Aspartate aminotransfer 99.9 1E-19 3.5E-24 191.1 26.9 319 107-554 62-403 (409)
61 1rv3_A Serine hydroxymethyltra 99.9 2.5E-20 8.6E-25 200.1 22.3 255 121-415 82-351 (483)
62 2vyc_A Biodegradative arginine 99.9 6.8E-20 2.3E-24 205.9 25.8 243 131-416 207-482 (755)
63 3frk_A QDTB; aminotransferase, 99.8 1.4E-20 4.9E-25 195.0 18.8 236 121-413 32-272 (373)
64 1gd9_A Aspartate aminotransfer 99.8 3.5E-19 1.2E-23 185.5 29.0 324 106-552 44-385 (389)
65 1fc4_A 2-amino-3-ketobutyrate 99.8 2.5E-19 8.4E-24 187.4 27.8 300 129-553 90-397 (401)
66 1xi9_A Putative transaminase; 99.8 1.4E-19 4.7E-24 189.9 24.7 311 120-554 73-404 (406)
67 2c0r_A PSAT, phosphoserine ami 99.8 1.4E-19 4.9E-24 186.6 24.4 333 92-552 6-360 (362)
68 3uwc_A Nucleotide-sugar aminot 99.8 9.9E-20 3.4E-24 188.5 23.1 251 106-414 21-276 (374)
69 3dr4_A Putative perosamine syn 99.8 8.5E-20 2.9E-24 190.4 22.6 239 123-415 54-295 (391)
70 2zc0_A Alanine glyoxylate tran 99.8 2.1E-19 7.2E-24 188.3 25.7 316 121-555 71-406 (407)
71 1c4k_A Protein (ornithine deca 99.8 3.1E-19 1.1E-23 198.8 27.8 246 132-416 176-448 (730)
72 1c7n_A Cystalysin; transferase 99.8 3.7E-19 1.3E-23 185.9 26.5 327 106-555 49-395 (399)
73 2x3l_A ORN/Lys/Arg decarboxyla 99.8 7.1E-21 2.4E-25 202.4 13.4 288 128-552 56-352 (446)
74 3l8a_A METC, putative aminotra 99.8 2.4E-19 8.2E-24 189.1 24.4 324 108-550 81-419 (421)
75 2c81_A Glutamine-2-deoxy-scyll 99.8 5.3E-19 1.8E-23 186.2 25.8 244 129-416 42-295 (418)
76 2a7v_A Serine hydroxymethyltra 99.8 3.3E-19 1.1E-23 190.4 24.3 312 122-552 93-440 (490)
77 1o4s_A Aspartate aminotransfer 99.8 4.4E-19 1.5E-23 185.0 24.8 317 106-550 59-386 (389)
78 4dq6_A Putative pyridoxal phos 99.8 8.5E-19 2.9E-23 182.4 26.2 321 103-550 48-390 (391)
79 3kki_A CAI-1 autoinducer synth 99.8 1.5E-18 5E-23 182.2 27.8 291 130-552 105-403 (409)
80 2dkj_A Serine hydroxymethyltra 99.8 1.2E-19 4.2E-24 189.9 19.4 306 123-552 63-387 (407)
81 3a2b_A Serine palmitoyltransfe 99.8 1E-18 3.4E-23 182.7 25.9 298 128-553 87-392 (398)
82 3kax_A Aminotransferase, class 99.8 1.2E-18 4.2E-23 180.6 26.3 319 107-550 43-382 (383)
83 2vi8_A Serine hydroxymethyltra 99.8 2.1E-19 7.3E-24 187.9 20.8 307 123-554 63-388 (405)
84 1u08_A Hypothetical aminotrans 99.8 1.7E-18 5.8E-23 180.2 26.4 268 106-424 48-325 (386)
85 3ffh_A Histidinol-phosphate am 99.8 5.6E-18 1.9E-22 174.6 29.9 285 132-549 70-362 (363)
86 1w23_A Phosphoserine aminotran 99.8 5.9E-19 2E-23 181.6 22.4 304 124-551 43-358 (360)
87 3g0t_A Putative aminotransfera 99.8 2E-18 7E-23 182.5 27.0 325 120-551 77-435 (437)
88 1bs0_A Protein (8-amino-7-oxon 99.8 2.1E-18 7.1E-23 179.2 26.4 292 129-549 84-383 (384)
89 1d2f_A MALY protein; aminotran 99.8 6.3E-18 2.2E-22 176.1 29.8 323 106-552 46-388 (390)
90 2oga_A Transaminase; PLP-depen 99.8 7E-19 2.4E-23 184.1 22.6 237 121-414 59-301 (399)
91 3dyd_A Tyrosine aminotransfera 99.8 3.3E-18 1.1E-22 180.7 27.5 318 120-553 91-424 (427)
92 1vp4_A Aminotransferase, putat 99.8 2.2E-18 7.4E-23 182.0 26.0 333 104-556 61-421 (425)
93 3ly1_A Putative histidinol-pho 99.8 1.1E-17 3.8E-22 171.7 30.6 289 131-551 53-350 (354)
94 2z61_A Probable aspartate amin 99.8 4.4E-18 1.5E-22 176.0 27.6 312 106-550 47-368 (370)
95 3piu_A 1-aminocyclopropane-1-c 99.8 1.8E-17 6.2E-22 175.4 32.1 322 121-553 82-432 (435)
96 3euc_A Histidinol-phosphate am 99.8 3.7E-18 1.3E-22 176.2 26.1 286 132-550 70-365 (367)
97 1iay_A ACC synthase 2, 1-amino 99.8 9.5E-18 3.2E-22 177.1 29.7 315 127-551 85-425 (428)
98 2cb1_A O-acetyl homoserine sul 99.8 2.9E-18 9.8E-23 180.4 25.4 235 129-413 56-306 (412)
99 2o0r_A RV0858C (N-succinyldiam 99.8 1.5E-18 5.3E-23 182.2 23.1 269 106-425 43-323 (411)
100 2bwn_A 5-aminolevulinate synth 99.8 9.2E-18 3.2E-22 175.5 28.8 299 130-552 92-399 (401)
101 1v2d_A Glutamine aminotransfer 99.8 2.8E-18 9.5E-23 178.2 23.8 316 106-554 43-372 (381)
102 1bw0_A TAT, protein (tyrosine 99.8 4.6E-18 1.6E-22 178.7 25.2 320 121-552 71-412 (416)
103 2rfv_A Methionine gamma-lyase; 99.8 3.2E-18 1.1E-22 179.1 23.5 216 128-410 63-285 (398)
104 3lws_A Aromatic amino acid bet 99.8 5.6E-18 1.9E-22 174.2 24.6 327 89-549 11-355 (357)
105 3op7_A Aminotransferase class 99.8 3.7E-18 1.3E-22 176.8 23.4 307 116-553 54-371 (375)
106 3b8x_A WBDK, pyridoxamine 5-ph 99.8 3.3E-17 1.1E-21 170.8 30.5 251 121-415 30-297 (390)
107 1ax4_A Tryptophanase; tryptoph 99.8 5.1E-18 1.8E-22 181.2 24.9 352 91-553 44-441 (467)
108 2zyj_A Alpha-aminodipate amino 99.8 9.6E-18 3.3E-22 175.2 25.8 306 120-555 69-395 (397)
109 3ele_A Amino transferase; RER0 99.8 1.3E-17 4.3E-22 174.2 26.7 308 120-553 71-396 (398)
110 3n0l_A Serine hydroxymethyltra 99.8 7.9E-18 2.7E-22 176.7 25.0 236 122-414 64-307 (417)
111 1gc0_A Methionine gamma-lyase; 99.8 7E-18 2.4E-22 176.6 24.1 214 131-411 67-287 (398)
112 3aow_A Putative uncharacterize 99.8 2.5E-17 8.6E-22 175.1 28.3 331 104-554 94-446 (448)
113 1mdo_A ARNB aminotransferase; 99.8 1.1E-17 3.8E-22 174.2 25.2 239 123-414 37-286 (393)
114 3fdb_A Beta C-S lyase, putativ 99.8 1.5E-17 5.2E-22 172.1 26.0 237 128-417 61-308 (377)
115 3get_A Histidinol-phosphate am 99.8 5.7E-17 2E-21 167.1 29.8 285 133-550 69-364 (365)
116 3ftb_A Histidinol-phosphate am 99.8 4.1E-17 1.4E-21 167.8 28.5 284 132-551 64-359 (361)
117 1yiz_A Kynurenine aminotransfe 99.8 1.7E-17 5.6E-22 175.2 26.1 271 106-426 55-353 (429)
118 3cq5_A Histidinol-phosphate am 99.8 8.3E-17 2.9E-21 166.4 30.6 291 127-550 71-365 (369)
119 3gbx_A Serine hydroxymethyltra 99.8 2.9E-18 9.9E-23 180.1 19.8 303 127-552 74-395 (420)
120 1o69_A Aminotransferase; struc 99.8 2.2E-17 7.6E-22 172.5 26.2 238 124-415 31-272 (394)
121 3nyt_A Aminotransferase WBPE; 99.8 2.6E-18 8.9E-23 177.7 18.8 236 121-413 31-271 (367)
122 3h14_A Aminotransferase, class 99.8 2.1E-17 7.2E-22 172.2 25.5 322 106-554 49-383 (391)
123 1jg8_A L-ALLO-threonine aldola 99.8 8.7E-18 3E-22 172.0 21.8 301 120-552 33-345 (347)
124 1e5e_A MGL, methionine gamma-l 99.8 8.3E-17 2.9E-21 168.8 29.7 212 133-411 66-285 (404)
125 2dou_A Probable N-succinyldiam 99.8 5.5E-17 1.9E-21 168.0 27.8 319 106-549 43-374 (376)
126 3tcm_A Alanine aminotransferas 99.8 1.1E-16 3.7E-21 172.6 30.5 339 117-557 126-498 (500)
127 3pj0_A LMO0305 protein; struct 99.8 3.1E-17 1.1E-21 168.6 24.7 290 132-548 51-357 (359)
128 2po3_A 4-dehydrase; external a 99.8 2.7E-16 9.1E-21 165.9 32.2 247 107-415 35-288 (424)
129 1b5p_A Protein (aspartate amin 99.8 5.6E-17 1.9E-21 168.8 26.2 306 120-550 63-382 (385)
130 3ecd_A Serine hydroxymethyltra 99.8 1.7E-17 5.7E-22 174.6 22.0 301 129-553 78-397 (425)
131 2o1b_A Aminotransferase, class 99.8 3.9E-17 1.3E-21 171.2 24.7 257 106-415 65-333 (404)
132 2oqx_A Tryptophanase; lyase, p 99.8 1.3E-16 4.6E-21 170.2 28.7 377 67-552 18-441 (467)
133 3qhx_A Cystathionine gamma-syn 99.8 6.6E-17 2.3E-21 168.8 24.7 214 132-413 69-289 (392)
134 2x5d_A Probable aminotransfera 99.8 8.3E-17 2.8E-21 169.0 25.6 326 106-553 55-398 (412)
135 1vef_A Acetylornithine/acetyl- 99.8 8.1E-17 2.8E-21 167.9 25.2 288 128-550 86-394 (395)
136 3hdo_A Histidinol-phosphate am 99.8 2E-16 6.7E-21 163.0 26.9 282 133-552 69-354 (360)
137 1cs1_A CGS, protein (cystathio 99.8 2.2E-16 7.7E-21 164.3 27.5 217 123-411 50-273 (386)
138 3fvs_A Kynurenine--oxoglutarat 99.8 9.8E-17 3.3E-21 168.8 24.9 252 120-423 62-342 (422)
139 1pff_A Methionine gamma-lyase; 99.8 1.8E-16 6.2E-21 161.2 25.3 208 134-408 3-218 (331)
140 1lc5_A COBD, L-threonine-O-3-p 99.7 6.8E-16 2.3E-20 159.1 29.7 308 107-553 43-360 (364)
141 3acz_A Methionine gamma-lyase; 99.7 1.9E-16 6.6E-21 165.1 25.6 213 131-411 61-280 (389)
142 3b46_A Aminotransferase BNA3; 99.7 6.2E-17 2.1E-21 172.0 21.5 273 104-425 73-367 (447)
143 2ez2_A Beta-tyrosinase, tyrosi 99.7 1.2E-15 4E-20 162.4 31.3 249 120-422 70-346 (456)
144 3n75_A LDC, lysine decarboxyla 99.7 1.2E-17 4.1E-22 184.6 16.0 237 132-417 198-458 (715)
145 3ezs_A Aminotransferase ASPB; 99.7 3E-16 1E-20 162.3 25.7 313 105-551 40-373 (376)
146 3ri6_A O-acetylhomoserine sulf 99.7 9.5E-17 3.2E-21 169.3 22.1 232 122-414 79-326 (430)
147 1fg7_A Histidinol phosphate am 99.7 5.4E-16 1.9E-20 159.6 27.1 228 133-420 62-299 (356)
148 2ctz_A O-acetyl-L-homoserine s 99.7 1.6E-16 5.6E-21 167.4 23.5 236 123-414 56-315 (421)
149 3h7f_A Serine hydroxymethyltra 99.7 1.4E-16 4.9E-21 169.3 22.6 235 123-414 85-332 (447)
150 3p1t_A Putative histidinol-pho 99.7 1.8E-15 6.3E-20 153.9 29.3 277 132-550 54-334 (337)
151 3e2y_A Kynurenine-oxoglutarate 99.7 3.4E-16 1.2E-20 163.9 24.0 269 106-425 41-337 (410)
152 2fq6_A Cystathionine beta-lyas 99.7 2.4E-16 8.4E-21 165.5 22.8 218 121-411 78-304 (415)
153 2eh6_A Acoat, acetylornithine 99.7 7.4E-16 2.5E-20 159.3 26.1 285 131-549 72-374 (375)
154 1qgn_A Protein (cystathionine 99.7 2.8E-16 9.7E-21 166.2 23.4 212 131-411 116-335 (445)
155 3jtx_A Aminotransferase; NP_28 99.7 1.1E-15 3.7E-20 159.3 27.5 254 106-407 48-317 (396)
156 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 1.1E-15 3.9E-20 161.7 27.2 253 121-414 58-334 (437)
157 3ju7_A Putative PLP-dependent 99.7 7.6E-16 2.6E-20 159.9 25.0 237 124-410 35-274 (377)
158 2x5f_A Aspartate_tyrosine_phen 99.7 1.2E-15 4E-20 161.1 26.8 311 120-553 83-429 (430)
159 3ndn_A O-succinylhomoserine su 99.7 2.3E-16 7.8E-21 165.8 20.7 219 123-413 79-304 (414)
160 3ihj_A Alanine aminotransferas 99.7 4.2E-15 1.4E-19 160.0 29.2 335 118-556 122-496 (498)
161 1n8p_A Cystathionine gamma-lya 99.7 5.3E-16 1.8E-20 162.0 21.5 209 131-409 57-276 (393)
162 2ord_A Acoat, acetylornithine 99.7 9E-16 3.1E-20 160.2 22.9 293 129-551 82-395 (397)
163 3if2_A Aminotransferase; YP_26 99.7 1.3E-15 4.4E-20 161.4 23.8 191 120-330 78-289 (444)
164 3ruy_A Ornithine aminotransfer 99.7 4.7E-15 1.6E-19 154.3 27.0 292 130-550 79-391 (392)
165 3nx3_A Acoat, acetylornithine 99.7 1.1E-14 3.8E-19 151.7 29.2 295 128-551 77-393 (395)
166 3cog_A Cystathionine gamma-lya 99.7 2.4E-15 8.3E-20 157.5 24.2 216 123-411 65-288 (403)
167 1sff_A 4-aminobutyrate aminotr 99.7 1.9E-14 6.4E-19 151.4 31.0 310 130-553 85-424 (426)
168 2r2n_A Kynurenine/alpha-aminoa 99.7 7.5E-15 2.6E-19 154.8 27.9 318 126-552 79-423 (425)
169 1s0a_A Adenosylmethionine-8-am 99.7 1.8E-14 6.1E-19 152.0 29.6 299 131-551 88-422 (429)
170 3rq1_A Aminotransferase class 99.7 5.6E-15 1.9E-19 155.2 25.5 326 106-553 61-415 (418)
171 4adb_A Succinylornithine trans 99.7 5.8E-15 2E-19 154.3 25.3 299 129-555 81-402 (406)
172 3fsl_A Aromatic-amino-acid ami 99.7 6E-15 2.1E-19 153.7 25.4 301 69-408 13-334 (397)
173 3dxv_A Alpha-amino-epsilon-cap 99.7 9.8E-15 3.4E-19 154.5 26.9 310 128-553 85-425 (439)
174 3qgu_A LL-diaminopimelate amin 99.7 1.3E-14 4.5E-19 153.9 26.7 302 120-552 106-439 (449)
175 3ez1_A Aminotransferase MOCR f 99.7 1.6E-14 5.5E-19 152.0 26.6 173 134-332 75-268 (423)
176 3t18_A Aminotransferase class 99.7 1.4E-14 5E-19 151.8 25.6 286 85-415 40-353 (413)
177 3i4j_A Aminotransferase, class 99.7 6.3E-14 2.2E-18 147.8 30.4 324 128-553 71-428 (430)
178 2pb2_A Acetylornithine/succiny 99.7 8.7E-15 3E-19 154.2 23.7 298 129-553 99-418 (420)
179 1ibj_A CBL, cystathionine beta 99.7 3.1E-15 1.1E-19 159.4 20.2 158 130-335 134-298 (464)
180 3nmy_A Xometc, cystathionine g 99.7 4.5E-15 1.6E-19 155.2 21.1 220 122-414 64-292 (400)
181 3g7q_A Valine-pyruvate aminotr 99.6 1.1E-14 3.8E-19 152.7 23.4 181 120-330 70-263 (417)
182 3b1d_A Betac-S lyase; HET: PLP 99.5 9.7E-18 3.3E-22 174.9 0.0 240 127-415 68-322 (392)
183 3ppl_A Aspartate aminotransfer 99.6 2.2E-14 7.4E-19 151.3 25.6 179 126-331 79-274 (427)
184 1ajs_A Aspartate aminotransfer 99.6 2.9E-14 1E-18 149.4 25.9 246 120-408 69-345 (412)
185 1z7d_A Ornithine aminotransfer 99.6 1.1E-13 3.6E-18 146.4 29.7 298 129-553 107-429 (433)
186 4f4e_A Aromatic-amino-acid ami 99.6 2.8E-14 9.7E-19 150.1 25.1 306 68-413 35-364 (420)
187 3ei9_A LL-diaminopimelate amin 99.6 3.4E-14 1.1E-18 150.0 25.6 300 120-549 93-424 (432)
188 2ay1_A Aroat, aromatic amino a 99.6 1.8E-14 6.2E-19 149.9 23.2 180 120-330 64-257 (394)
189 3fkd_A L-threonine-O-3-phospha 99.6 2.8E-14 9.5E-19 146.1 24.2 279 133-552 54-341 (350)
190 2oat_A Ornithine aminotransfer 99.6 3.4E-14 1.2E-18 150.5 25.5 296 131-551 120-437 (439)
191 2aeu_A Hypothetical protein MJ 99.6 4.7E-15 1.6E-19 153.8 18.5 159 128-332 57-222 (374)
192 1yaa_A Aspartate aminotransfer 99.6 1.3E-14 4.6E-19 152.0 21.8 292 68-408 15-345 (412)
193 2eo5_A 419AA long hypothetical 99.6 1.5E-13 5.2E-18 144.5 29.9 292 130-552 87-417 (419)
194 3dod_A Adenosylmethionine-8-am 99.6 1.6E-13 5.4E-18 145.7 29.7 324 128-554 86-444 (448)
195 3hmu_A Aminotransferase, class 99.6 1.1E-13 3.8E-18 147.9 28.6 320 129-556 99-455 (472)
196 7aat_A Aspartate aminotransfer 99.6 2.9E-14 9.9E-19 148.8 23.3 235 68-330 14-264 (401)
197 3jzl_A Putative cystathionine 99.6 2.9E-14 9.9E-19 149.2 22.8 222 127-413 61-306 (409)
198 3a8u_X Omega-amino acid--pyruv 99.6 2.7E-13 9.2E-18 143.9 30.3 317 129-552 93-446 (449)
199 1uu1_A Histidinol-phosphate am 99.6 6.5E-14 2.2E-18 142.6 24.6 196 157-413 78-277 (335)
200 3i16_A Aluminum resistance pro 99.6 6E-14 2.1E-18 147.3 23.1 224 126-413 74-323 (427)
201 3gju_A Putative aminotransfera 99.6 6.5E-13 2.2E-17 141.5 30.0 179 129-332 95-306 (460)
202 3i5t_A Aminotransferase; pyrid 99.6 1E-12 3.4E-17 140.6 31.2 323 128-556 96-457 (476)
203 3n5m_A Adenosylmethionine-8-am 99.6 7.1E-13 2.4E-17 140.8 29.4 319 128-551 90-450 (452)
204 1zod_A DGD, 2,2-dialkylglycine 99.6 2.6E-13 8.8E-18 143.2 25.8 311 129-553 85-432 (433)
205 4a6r_A Omega transaminase; tra 99.6 7.1E-13 2.4E-17 141.2 29.4 322 128-557 93-453 (459)
206 3l44_A Glutamate-1-semialdehyd 99.6 2.5E-13 8.4E-18 143.5 25.2 308 130-555 96-432 (434)
207 3d6k_A Putative aminotransfera 99.6 3.5E-13 1.2E-17 141.9 26.1 185 121-331 72-272 (422)
208 3tfu_A Adenosylmethionine-8-am 99.6 2.4E-13 8.3E-18 144.6 25.0 307 129-553 118-453 (457)
209 2q7w_A Aspartate aminotransfer 99.6 5.4E-14 1.8E-18 146.4 19.4 238 120-407 64-332 (396)
210 2cjg_A L-lysine-epsilon aminot 99.6 2.7E-13 9.1E-18 144.0 25.0 310 130-553 102-448 (449)
211 3asa_A LL-diaminopimelate amin 99.6 5.8E-14 2E-18 146.7 19.2 303 121-554 71-394 (400)
212 1ohv_A 4-aminobutyrate aminotr 99.6 2.5E-13 8.4E-18 145.2 24.5 309 127-552 108-470 (472)
213 4ffc_A 4-aminobutyrate aminotr 99.6 3E-12 1E-16 136.0 32.6 309 128-554 106-450 (453)
214 3oks_A 4-aminobutyrate transam 99.6 3.3E-12 1.1E-16 135.6 32.6 310 128-551 103-449 (451)
215 3hvy_A Cystathionine beta-lyas 99.6 1.9E-13 6.6E-18 143.5 22.2 224 127-414 76-324 (427)
216 3meb_A Aspartate aminotransfer 99.6 1.1E-12 3.7E-17 139.3 28.1 233 67-328 34-289 (448)
217 3fq8_A Glutamate-1-semialdehyd 99.6 1.1E-13 3.8E-18 145.8 20.3 166 128-331 91-281 (427)
218 3ht4_A Aluminum resistance pro 99.6 1.2E-13 4.1E-18 145.6 20.5 223 131-413 67-312 (431)
219 3f6t_A Aspartate aminotransfer 99.5 4.7E-13 1.6E-17 145.2 24.5 202 102-335 117-332 (533)
220 3k28_A Glutamate-1-semialdehyd 99.5 2.3E-13 7.8E-18 143.6 21.0 222 130-407 94-340 (429)
221 2cy8_A D-phgat, D-phenylglycin 99.5 1E-12 3.5E-17 139.6 25.6 168 127-332 95-284 (453)
222 4e77_A Glutamate-1-semialdehyd 99.5 1.5E-12 5.2E-17 137.2 26.3 165 129-331 93-282 (429)
223 2epj_A Glutamate-1-semialdehyd 99.5 2.3E-12 7.8E-17 136.1 24.3 167 128-332 95-286 (434)
224 4eu1_A Mitochondrial aspartate 99.5 1.9E-12 6.7E-17 135.4 23.3 290 69-407 28-344 (409)
225 3ou5_A Serine hydroxymethyltra 99.5 8.9E-12 3.1E-16 128.1 26.9 251 121-425 92-372 (490)
226 2e7u_A Glutamate-1-semialdehyd 99.4 1.4E-11 4.6E-16 129.7 22.7 224 128-407 91-340 (424)
227 4ao9_A Beta-phenylalanine amin 99.4 2.9E-11 9.9E-16 127.5 22.0 165 129-333 127-303 (454)
228 4atq_A 4-aminobutyrate transam 99.3 5.4E-09 1.8E-13 110.5 31.5 179 129-333 107-311 (456)
229 2zy4_A L-aspartate beta-decarb 99.2 1.7E-09 6E-14 117.3 24.9 174 130-333 144-332 (546)
230 4e3q_A Pyruvate transaminase; 99.2 5.5E-09 1.9E-13 110.9 28.1 320 129-556 111-471 (473)
231 3bwn_A AT1G70560, L-tryptophan 99.2 7.1E-10 2.4E-14 115.3 19.6 220 128-414 71-308 (391)
232 2yky_A Beta-transaminase; tran 98.7 1.3E-11 4.4E-16 130.9 0.0 165 128-332 139-315 (465)
233 3k7y_A Aspartate aminotransfer 99.0 2.9E-08 1E-12 103.5 21.6 188 119-334 66-269 (405)
234 2hox_A ALLIIN lyase 1; cystein 99.0 6.5E-09 2.2E-13 109.4 16.6 223 127-412 102-341 (427)
235 4h51_A Aspartate aminotransfer 98.8 4.3E-07 1.5E-11 94.9 22.2 186 121-332 83-281 (420)
236 4a0g_A Adenosylmethionine-8-am 98.8 1.7E-07 5.8E-12 106.1 19.5 96 232-332 577-680 (831)
237 3vp6_A Glutamate decarboxylase 96.1 0.0046 1.6E-07 66.1 5.3 73 422-494 356-430 (511)
238 4e1o_A HDC, histidine decarbox 92.3 0.11 3.7E-06 54.8 4.9 68 423-490 348-415 (481)
239 3k40_A Aromatic-L-amino-acid d 92.2 0.093 3.2E-06 55.3 4.3 66 425-490 343-408 (475)
240 2jis_A Cysteine sulfinic acid 90.0 0.23 7.8E-06 52.8 4.7 71 424-494 370-440 (515)
241 2okj_A Glutamate decarboxylase 88.2 0.38 1.3E-05 50.8 4.9 72 423-494 354-427 (504)
242 1js3_A DDC;, DOPA decarboxylas 85.9 0.58 2E-05 49.1 4.6 66 425-490 346-411 (486)
243 2qma_A Diaminobutyrate-pyruvat 85.7 0.49 1.7E-05 49.8 3.9 81 428-508 367-447 (497)
244 2dgk_A GAD-beta, GADB, glutama 84.6 0.87 3E-05 47.2 5.2 60 433-492 304-368 (452)
245 3bc8_A O-phosphoseryl-tRNA(SEC 62.0 4.5 0.00015 41.9 3.3 117 438-555 301-445 (450)
246 3mc6_A Sphingosine-1-phosphate 56.3 8 0.00028 40.2 4.2 51 440-490 330-381 (497)
247 3hl2_A O-phosphoseryl-tRNA(SEC 55.5 9.6 0.00033 39.5 4.4 122 435-557 316-465 (501)
248 1tks_A 3,4-dihydroxy-2-butanon 47.5 23 0.00078 32.1 5.0 51 231-283 143-193 (204)
249 3hbx_A GAD 1, glutamate decarb 39.5 20 0.00067 37.5 3.9 56 437-492 324-380 (502)
250 3mio_A DHBP synthase, 3,4-dihy 39.5 44 0.0015 30.3 5.6 51 231-283 142-193 (206)
251 1zco_A 2-dehydro-3-deoxyphosph 35.2 54 0.0018 31.0 5.8 63 226-291 137-204 (262)
252 3kfu_G Glutamyl-tRNA(Gln) amid 34.3 1.4E+02 0.0048 23.0 7.2 60 11-74 16-75 (92)
253 3ip4_C Aspartyl/glutamyl-tRNA( 32.7 1.6E+02 0.0053 23.2 7.3 64 10-74 13-79 (100)
254 1g57_A DHBP synthase, 3,4-dihy 32.0 64 0.0022 29.5 5.5 50 231-283 151-200 (217)
255 1snn_A DHBP synthase, 3,4-dihy 30.6 69 0.0024 29.5 5.4 50 231-283 162-211 (227)
256 3fs2_A 2-dehydro-3-deoxyphosph 29.7 48 0.0017 31.9 4.5 56 229-289 166-224 (298)
257 3nvt_A 3-deoxy-D-arabino-heptu 29.6 62 0.0021 32.5 5.5 63 226-291 256-323 (385)
258 3sz8_A 2-dehydro-3-deoxyphosph 29.0 47 0.0016 31.8 4.3 57 229-289 145-205 (285)
259 1o60_A 2-dehydro-3-deoxyphosph 28.5 53 0.0018 31.6 4.6 77 206-289 122-203 (292)
260 1vs1_A 3-deoxy-7-phosphoheptul 28.5 77 0.0026 30.2 5.7 63 226-291 152-219 (276)
261 3mad_A Sphingosine-1-phosphate 28.1 53 0.0018 34.1 4.9 46 438-483 360-405 (514)
262 2qkf_A 3-deoxy-D-manno-octulos 27.6 57 0.0019 31.2 4.6 77 206-289 119-200 (280)
263 1vr6_A Phospho-2-dehydro-3-deo 27.1 72 0.0025 31.5 5.3 63 226-291 220-287 (350)
264 2nwr_A 2-dehydro-3-deoxyphosph 26.5 53 0.0018 31.2 4.1 75 206-289 108-186 (267)
265 3kts_A Glycerol uptake operon 26.2 64 0.0022 28.9 4.4 47 230-289 18-66 (192)
266 3h0l_C Glutamyl-tRNA(Gln) amid 26.2 1.8E+02 0.0063 22.4 6.6 62 11-74 12-76 (94)
267 3rag_A Uncharacterized protein 25.2 66 0.0023 30.0 4.4 37 249-287 10-46 (242)
268 4gqr_A Pancreatic alpha-amylas 24.4 27 0.00094 35.9 1.9 31 258-288 69-99 (496)
269 3tml_A 2-dehydro-3-deoxyphosph 24.1 47 0.0016 31.9 3.2 57 229-289 142-206 (288)
270 3ff4_A Uncharacterized protein 23.9 90 0.0031 25.5 4.6 47 231-289 68-114 (122)
271 1k4i_A 3,4-dihydroxy-2-butanon 23.8 86 0.0029 28.9 4.8 50 232-283 152-211 (233)
272 3ecs_A Translation initiation 22.1 5E+02 0.017 25.0 10.2 98 156-285 122-229 (315)
273 2q5c_A NTRC family transcripti 21.9 2.6E+02 0.009 24.7 7.8 36 206-247 107-142 (196)
274 3vup_A Beta-1,4-mannanase; TIM 21.1 73 0.0025 30.2 4.1 24 263-286 87-110 (351)
275 1g94_A Alpha-amylase; beta-alp 20.4 38 0.0013 34.7 2.0 32 258-289 57-88 (448)
No 1
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=2.8e-75 Score=627.13 Aligned_cols=470 Identities=68% Similarity=1.163 Sum_probs=408.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccC
Q psy9807 17 GDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYF 96 (561)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~ 96 (561)
||+++||+.+++++|++++|+++++++||.|..+|+++++.++..+|++|.+++++++++.+.+.++.++|+||+||+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (475)
T 3k40_A 1 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYF 80 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCSSCTTCSGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHH
Q psy9807 97 PTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAK 176 (561)
Q Consensus 97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar 176 (561)
++++++++++++++.+++|++...|..+|.++++|+++++|+++++|+|..|.....+.++|+||+|||+||++|+.++|
T Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar 160 (475)
T 3k40_A 81 PTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAK 160 (475)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998754433445679999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEE
Q psy9807 177 AKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQ 252 (561)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~ 252 (561)
++...+.+..++++.+.++.++.+|+++. +|+.+++++.|.+++.||+ +++ ||+++|+++|++ +...|..|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~--~~~~~~~~~~ 237 (475)
T 3k40_A 161 AKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQ--DVAEGLIPFY 237 (475)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHH--HHHTTCEEEE
T ss_pred HHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHH--HHHCCCccEE
Confidence 98877666556655555555677777776 9999999999999999999 888 999999999998 7777878999
Q ss_pred EEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 253 VVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 253 vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
|++++|+|.+|.+||+++|+++|++||+|+|||||||++.+++++++..+.+++.+||+++|+||||++|++||++++++
T Consensus 238 v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~ 317 (475)
T 3k40_A 238 AVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKD 317 (475)
T ss_dssp EEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESS
T ss_pred EEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeC
Confidence 99999999999999999999999999999999999999888899888888899999999999999999999999999999
Q ss_pred hhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 333 PSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
+..+.+.+...+.|+.....+..+++.+++++++|+++++++|++++.+|.+|+++++++.+++++++++.|+++|+|++
T Consensus 318 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l 397 (475)
T 3k40_A 318 PSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFEL 397 (475)
T ss_dssp GGGC---------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 87776777778889876543445677889999999999999999999999999999999999999999999999999999
Q ss_pred eccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeec
Q psy9807 413 IYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL 492 (561)
Q Consensus 413 ~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~ 492 (561)
+.++..++|+|+++
T Consensus 398 ~~~~~~~iv~f~~~------------------------------------------------------------------ 411 (475)
T 3k40_A 398 AAEINMGLVCFRLK------------------------------------------------------------------ 411 (475)
T ss_dssp SSCCBTTEEEEEES------------------------------------------------------------------
T ss_pred ecCCceEEEEEEeC------------------------------------------------------------------
Confidence 98887888777553
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 493 KGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 493 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
+.+..+.++.++|+++|.++++++.+.|..++|+++++++|+++||++++++|+++++++.++
T Consensus 412 -~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~~ 474 (475)
T 3k40_A 412 -GSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQE 474 (475)
T ss_dssp -SCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred -CchHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 334557789999999999999999999999999999999999999999999999999887653
No 2
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-74 Score=624.03 Aligned_cols=474 Identities=47% Similarity=0.908 Sum_probs=429.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCcc
Q psy9807 12 GSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPK 91 (561)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~ 91 (561)
|+-..||.++||+.+++++|++++|+++++++||.|..+|+++++.++..+|++|.+++++++++.+.+.++.++|+||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 80 (481)
T 4e1o_A 1 GPLGSMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPH 80 (481)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHHHHSGGGSCSSCCCCTTTTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccc-cCCCCCCeEEeCChhHHHHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLA-CSGGKGGGVIQGTASEATLV 170 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~-~~~~~~~g~~t~ggT~anl~ 170 (561)
||+|+++++++|+++++++.+++|++...|..+|.++++|+++++|+++++|+|..+.. ...+.++|+||+|||+||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~ 160 (481)
T 4e1o_A 81 MHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLI 160 (481)
T ss_dssp BCSSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHH
T ss_pred eeEeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999976421 11223578999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhc
Q psy9807 171 ALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREM 246 (561)
Q Consensus 171 al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~ 246 (561)
|+.++|++...+.+..++++.+.++.++.+|+++. +|+.++++++|.+++.||+ ++++||+++|+++|++ +...
T Consensus 161 al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~--~~~~ 238 (481)
T 4e1o_A 161 ALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEE--DKQR 238 (481)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHH--HHHT
T ss_pred HHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHH--HHhC
Confidence 99999999887766666666555556678888777 8999999999999999999 8999999999999998 8777
Q ss_pred CCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccce
Q psy9807 247 CSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCS 326 (561)
Q Consensus 247 g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g 326 (561)
|..|++|++++|+|.+|.+|||++|+++|++||+|+|||+|||++.+++++++..+.|++.+||+++|+||||++|++||
T Consensus 239 g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g 318 (481)
T 4e1o_A 239 GLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCT 318 (481)
T ss_dssp TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCE
T ss_pred CCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceE
Confidence 88899999999999999999999999999999999999999999988999999988899999999999999999999999
Q ss_pred eEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy9807 327 AMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS 406 (561)
Q Consensus 327 ~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 406 (561)
+++++++..+.+.+...+.|+.....+..+++.+++++++|+++++++|++++.+|.+|+++++++..++++++++.|++
T Consensus 319 ~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 398 (481)
T 4e1o_A 319 GFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRN 398 (481)
T ss_dssp EEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999998887778888899877554455678899999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhc
Q psy9807 407 DDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 486 (561)
Q Consensus 407 ~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~ 486 (561)
+|+|+++.++..++|+|+++
T Consensus 399 ~~g~~~~~~~~~~~v~f~~~------------------------------------------------------------ 418 (481)
T 4e1o_A 399 DPSFEIPAKRHLGLVVFRLK------------------------------------------------------------ 418 (481)
T ss_dssp CTTEECCSCCCSSEEEEEES------------------------------------------------------------
T ss_pred CCCeEEecCCceeEEEEEeC------------------------------------------------------------
Confidence 99999988877888776553
Q ss_pred ceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 487 LVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 487 ~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
+.+..+.++.++|+++|.++++++.+.|..++|+++++++|+++||++++++|++++++++
T Consensus 419 -------~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 419 -------GPNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp -------SCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -------CchHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3345577899999999988888999999999999999999999999999999999988765
No 3
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=1.5e-66 Score=561.61 Aligned_cols=474 Identities=56% Similarity=1.010 Sum_probs=402.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccC
Q psy9807 17 GDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYF 96 (561)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~ 96 (561)
||.++||+++++++|.+++|+++++++||.|..+|+++++.++..+|++|.+++++++++.+.+.++..+|+||+|++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (486)
T 1js3_A 1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF 80 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHH
Q psy9807 97 PTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAK 176 (561)
Q Consensus 97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar 176 (561)
++++++++.+++++.+++|++...|..+|..+++|+++++|+++++|++..+....++.++|+||+|||+||+.|+.++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~ 160 (486)
T 1js3_A 81 PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR 160 (486)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999986542211122468999999999999999998
Q ss_pred HHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEE
Q psy9807 177 AKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQ 252 (561)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~ 252 (561)
+...++.+..+.++.+.+..++++|+++. +|+.++++..|.+++.||+ ++++||+++|+++|.+ +.+.|..|++
T Consensus 161 ~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~--~~~~g~~p~~ 238 (486)
T 1js3_A 161 TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALER--DKAAGLIPFF 238 (486)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHH--HHHTTCEEEE
T ss_pred HHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHH--HHhCCCCceE
Confidence 76544322211111111112355666665 8999999999999999999 8899999999999998 7777888999
Q ss_pred EEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 253 VVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 253 vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
|++++|+|.+|.+||+++|+++|++||+|+|||+|||++.+.+|++++.+.+++.+||+++++|||+++|++||++++++
T Consensus 239 vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~ 318 (486)
T 1js3_A 239 VVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKR 318 (486)
T ss_dssp EEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESC
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeC
Confidence 99999999999999999999999999999999999999888888888877888889999999999999999999999999
Q ss_pred hhhHHHhhccCCCccccCCC--CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 333 PSWVVNAFNVDPLYLKHDQQ--GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
+..+.+.+...+.|+..... +...++.+++++++|+++++++|++++.+|.+|+++++++..++++++.+.|++.|++
T Consensus 319 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 398 (486)
T 1js3_A 319 RTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRF 398 (486)
T ss_dssp HHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 87666666666788765321 2345677788999999999999999999999999999999999999999999999999
Q ss_pred EEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 411 EVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 411 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
+++.++..++++|++.
T Consensus 399 ~~~~~~~~~~v~f~~~---------------------------------------------------------------- 414 (486)
T 1js3_A 399 EVCAEVTLGLVCFRLK---------------------------------------------------------------- 414 (486)
T ss_dssp EECSCCCSSEEEEEES----------------------------------------------------------------
T ss_pred EEeCCCceeEEEEEec----------------------------------------------------------------
Confidence 9987777777666543
Q ss_pred ecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHhh
Q psy9807 491 RLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKEEKE 559 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~~~~ 559 (561)
+.+..+.++.++|.++|.++++++...+..++|+++++++++++||+++++.|+++++++.++.+.
T Consensus 415 ---~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~~~~~ 480 (486)
T 1js3_A 415 ---GSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLAAEEG 480 (486)
T ss_dssp ---SCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC----
T ss_pred ---ChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 223456788999999998888888888899999999999999999999999999998887655443
No 4
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=4.3e-64 Score=544.71 Aligned_cols=472 Identities=21% Similarity=0.315 Sum_probs=402.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCC--CCCCCCccccccc---CCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCcc
Q psy9807 17 GDVNEFKDFAKAMVDYVGNYLENIRDRR--VLPTVEPGYLRPL---IPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPK 91 (561)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~ 91 (561)
-+.+++++++++++|++++|++++.+++ |.+..+|++++.. ++.++|++|.++++|++++.+.+.++. +++||+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~p~ 97 (511)
T 3vp6_A 19 NGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGV-RTGHPR 97 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSC-CTTSTT
T ss_pred CChHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhhccC-CCCCCC
Confidence 5789999999999999999999987654 6778899999999 899999999999999999999887664 579999
Q ss_pred ccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVA 171 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~a 171 (561)
||+|+++++++++++++++.+++|++...|..+|..+++|+++++|+++++|++.+ ..+|+||+|||+||+.|
T Consensus 98 f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~-------~~~~~~t~ggt~a~~~a 170 (511)
T 3vp6_A 98 FFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSK-------DGDGIFSPGGAISNMYS 170 (511)
T ss_dssp EESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSS-------SCEEEEESSHHHHHHHH
T ss_pred ceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCC-------CCceEECCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999853 13789999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccC---CeEEeeC-CCCccChhhHHHHHhhhchh
Q psy9807 172 LLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLG---KMLDLPK-EFLACSGGKGGGVIQRKSDR 244 (561)
Q Consensus 172 l~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~---~v~~v~~-~~g~~d~~~Le~~i~~~~~~ 244 (561)
+.++|++..+.....+ + ...++.+|+++. +|+.+++++.|. +++.||+ .+++||+++|+++|++ ++
T Consensus 171 l~~a~~~~~~~~~~~G--~---~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~--~~ 243 (511)
T 3vp6_A 171 IMAARYKYFPEVKTKG--M---AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILE--AK 243 (511)
T ss_dssp HHHHHHHHCTHHHHHC--G---GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHH--HH
T ss_pred HHHHHHHhhhhhhhcC--c---ccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHH--HH
Confidence 9999987643332222 0 001356777775 899999998877 8999999 8899999999999998 87
Q ss_pred hcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc
Q psy9807 245 EMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD 324 (561)
Q Consensus 245 ~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g 324 (561)
+.|..|++|++++++|.+|.+|||++|+++|++||+|+|||+|||++.+.+++++..+.|++.|||+++++||||++|.+
T Consensus 244 ~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g 323 (511)
T 3vp6_A 244 QKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQ 323 (511)
T ss_dssp HTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC
T ss_pred hcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcC
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecChhhHHHhhccCCCccccCCC--CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy9807 325 CSAMWLKDPSWVVNAFNVDPLYLKHDQQ--GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQ 402 (561)
Q Consensus 325 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~ 402 (561)
||+++++++..+...+...+.|+..... ....++.+++++++|+++++++|++++.+|.+|+++++++..++++++++
T Consensus 324 ~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~ 403 (511)
T 3vp6_A 324 CSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYA 403 (511)
T ss_dssp CEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988787777888899875432 22356778899999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEec--cccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhh
Q psy9807 403 LVRSDDRFEVIY--EVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 480 (561)
Q Consensus 403 ~l~~~~g~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~ 480 (561)
.|++.|+|+++. ++..++|+|++.|..+..... .. .
T Consensus 404 ~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~-~~-------------------------------------~---- 441 (511)
T 3vp6_A 404 KIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPD-SP-------------------------------------Q---- 441 (511)
T ss_dssp HHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCC-CH-------------------------------------H----
T ss_pred HHhcCCCEEEEecCCCCeEEEEEEEeCcccccccc-ch-------------------------------------h----
Confidence 999999999998 688899999887633210000 00 0
Q ss_pred hhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECC-EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 481 YEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRD-VYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 481 ~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
+....+..+.++.++|.++|.+++..+...+ ..++|++++++.++++||++++++|+++++.+-.
T Consensus 442 ----------~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~~~ 507 (511)
T 3vp6_A 442 ----------RREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDLHH 507 (511)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC----
T ss_pred ----------HHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhhh
Confidence 0000123456889999999988877555454 4589999989999999999999999999887643
No 5
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=2.8e-61 Score=522.79 Aligned_cols=470 Identities=22% Similarity=0.315 Sum_probs=392.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCC--CCCCCCccccccc---CCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCcc
Q psy9807 17 GDVNEFKDFAKAMVDYVGNYLENIRDRR--VLPTVEPGYLRPL---IPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPK 91 (561)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~ 91 (561)
||.++|++++++++|++++|++++.+++ |.+.++|+++++. ++..+|++|.+++++++++++.+.++. ++.||+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~p~ 94 (504)
T 2okj_A 16 NGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGV-RTGHPR 94 (504)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHSCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSC-CTTCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhccC-CCCCCC
Confidence 9999999999999999999999987654 9999999999999 999999999999999999988776555 456999
Q ss_pred ccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVA 171 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~a 171 (561)
||+|++++..+++++++++.+++|++.+.|..+|..+++|+++++|+++++|++.+ ...++||+|||+||+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~-------~~~~~~t~ggtea~~~a 167 (504)
T 2okj_A 95 FFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSK-------DGDGIFSPGGAISNMYS 167 (504)
T ss_dssp EESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSS-------SCEEEEESSHHHHHHHH
T ss_pred EEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCC-------CCCEEEeCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999831 13789999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccC---CeEEeeC-CCCccChhhHHHHHhhhchh
Q psy9807 172 LLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLG---KMLDLPK-EFLACSGGKGGGVIQRKSDR 244 (561)
Q Consensus 172 l~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~---~v~~v~~-~~g~~d~~~Le~~i~~~~~~ 244 (561)
+.++|++..+..+..+ . ...++.+|+++. +|+.+++...|. +++.||+ ++++||+++|+++|++ +.
T Consensus 168 l~~~~~~~~~~~~~~G--~---~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~--~~ 240 (504)
T 2okj_A 168 IMAARYKYFPEVKTKG--M---AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILE--AK 240 (504)
T ss_dssp HHHHHHHHCTTHHHHC--G---GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHH--HH
T ss_pred HHHHHHHHhhHHhhcC--c---cccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecCCCCCCCHHHHHHHHHH--HH
Confidence 9999875432111111 0 001244555554 899999987765 8999999 7899999999999988 77
Q ss_pred hcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc
Q psy9807 245 EMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD 324 (561)
Q Consensus 245 ~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g 324 (561)
+.|..|++|++++++|.+|.++|+++|+++|++||+|+|||+||+++.+.+++++..+.+++.+||+++++|||+++|++
T Consensus 241 ~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~ 320 (504)
T 2okj_A 241 QKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQ 320 (504)
T ss_dssp HTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC
T ss_pred HCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcc
Confidence 77878999999999999999999999999999999999999999999888888888888888999999999999999999
Q ss_pred ceeEEecChhhHHHhhccCCCccccCCC--CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy9807 325 CSAMWLKDPSWVVNAFNVDPLYLKHDQQ--GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQ 402 (561)
Q Consensus 325 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~ 402 (561)
||+++++++..+...+...++|+..... +...++.+++++++||++++++|++++.+|.+|+++++++..++++++.+
T Consensus 321 ~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~ 400 (504)
T 2okj_A 321 CSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYA 400 (504)
T ss_dssp CEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999876666666677888854321 22345777889999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEec--cccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhh
Q psy9807 403 LVRSDDRFEVIY--EVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 480 (561)
Q Consensus 403 ~l~~~~g~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~ 480 (561)
.|+++|+++++. ++..++|+|++.+.... ... .. ... .
T Consensus 401 ~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~-~~~-~~------------~~~----------~---------------- 440 (504)
T 2okj_A 401 KIKNREEFEMVFNGEPEHTNVCFWYIPQSLR-GVP-DS------------PQR----------R---------------- 440 (504)
T ss_dssp HHTTCTTEEESSSSCCSSSCEEEEECCGGGS-SCC-CC------------HHH----------H----------------
T ss_pred HHhcCCCEEEEecCCCCeEEEEEEEeCcccc-ccc-cc------------hhh----------H----------------
Confidence 999999999987 57888899987542100 000 00 000 0
Q ss_pred hhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCE-EEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 481 YEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDV-YFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 481 ~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~-~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
...+..+..+.++|.++|.+++.++...+. .++|++++++.|+++||++++++|+++++++
T Consensus 441 ------------~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 441 ------------EKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp ------------HHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred ------------HHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 001223567889999999888877767665 6999999889999999999999999887654
No 6
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=9.3e-60 Score=509.97 Aligned_cols=465 Identities=20% Similarity=0.267 Sum_probs=382.3
Q ss_pred HhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccCCC-CCCCCCCCHHHHHHHHHHhhcCCCC
Q psy9807 7 KKIKNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYLRPLIPE-TAPDTPDTWQEVMSDIERVIMPGVT 85 (561)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~il~~~~~~~~~~~~ 85 (561)
|+.+.++.- ++.++||+++++++|.+++|+++. .+| .+..+|+++++.++. .+|++|.+++++++++.+.+.+++.
T Consensus 20 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 96 (497)
T 2qma_A 20 KKHFIHTGE-LGSAEFASVMSHTTSAMKSVFEQV-NAP-YSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAI 96 (497)
T ss_dssp GGGBCCSST-TTTHHHHHHHHHHHHHHHHHHHHC-CSS-SCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTSC
T ss_pred HHhccCCCC-CCHHHHHHHHHHHHHHHHHHHhhc-cCC-CCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhcCCC
Confidence 566777755 899999999999999999999997 344 777889999999987 4799999999999999999999999
Q ss_pred CCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh
Q psy9807 86 HWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 165 (561)
Q Consensus 86 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT 165 (561)
+|+||+||+|+++++.+++++++++...+|++...|..+|..+++|+++++|+++++|+++. ..++||+|||
T Consensus 97 ~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~--------~~~~~t~ggt 168 (497)
T 2qma_A 97 FTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEK--------ADGIFTSGGT 168 (497)
T ss_dssp CTTSTTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTT--------CEEEEESSHH
T ss_pred CCCCCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCC--------CCeEEcCCch
Confidence 99999999999999999999999999999999999999999999999999999999999752 3789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccc---cceEEeccc---chHHHHHHhccC---CeEEeeC-CCCccChhhHH
Q psy9807 166 EATLVALLGAKAKTMQRVKEAHPDWKDSDII---ANLIASPAC---TELEVVMLDWLG---KMLDLPK-EFLACSGGKGG 235 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~~~~~~~~~~~~~~~---~~~vv~~s~---~s~~kaa~~~g~---~v~~v~~-~~g~~d~~~Le 235 (561)
+||+.++.++|++...+.. +++....|.. ++..|+++. +|+.+++...|. +++.||+ ++++||+++|+
T Consensus 169 ~a~~~al~~ar~~~~~~~~--~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~ 246 (497)
T 2qma_A 169 QSNQMGLMLARDWIADKLS--GHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLD 246 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHH--CCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHH
T ss_pred HHHHHHHHHHHHHHHHhhc--ccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHH
Confidence 9999999999876543210 0000000111 243455554 899999987765 7999999 88999999999
Q ss_pred HHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecC
Q psy9807 236 GVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNP 315 (561)
Q Consensus 236 ~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~ 315 (561)
++|++ +...|.+|++|+++.|+|.+|.++|+++|+++|++||+|+|||+||+++...++ +++.+.+++.+|++++|+
T Consensus 247 ~~i~~--~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~ 323 (497)
T 2qma_A 247 EVIAQ--AKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDF 323 (497)
T ss_dssp HHHHH--HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEET
T ss_pred HHHHH--HHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcc
Confidence 99988 766676788999999999999999999999999999999999999999887776 777777888999999999
Q ss_pred CccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHH
Q psy9807 316 HKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQIS 395 (561)
Q Consensus 316 HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~ 395 (561)
|||+++|++||+++++++..+. .+...+.|+.... ...+++..++++++|+++++++|++++.+|.+|+++++++..+
T Consensus 324 hK~l~~p~~~G~l~~~~~~~~~-~~~~~~~yl~~~~-~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~ 401 (497)
T 2qma_A 324 HKLFYQTISCGALLVNDKSNFK-FLLHHADYLNREH-DELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLA 401 (497)
T ss_dssp TTTTCCCSSCEEEEESCGGGGG-GGCC---------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhccCCCcceEEEEEeCHHHHH-HhcCCchhcCCcc-ccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 9999999999999999876553 3445567775432 1134566778899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCc
Q psy9807 396 LAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD 475 (561)
Q Consensus 396 la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~ 475 (561)
+++++.+.|++.|+++++.++..++|+|++.+...
T Consensus 402 ~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~--------------------------------------------- 436 (497)
T 2qma_A 402 QTLEVADMIRTNDQFELLAEPSLSTVLFRATHETA--------------------------------------------- 436 (497)
T ss_dssp HHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSS---------------------------------------------
T ss_pred HHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCcc---------------------------------------------
Confidence 99999999999999999888888888887754210
Q ss_pred hhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 476 RFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 476 ~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
..+.++.++.+.+.+.|.++..++...+..++|++++++.++++||+++++.|+++.++
T Consensus 437 ------------------~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 437 ------------------DLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp ------------------CHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------CHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 01234667888999999988888888888999999888999999999999999988765
No 7
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=1.5e-59 Score=510.35 Aligned_cols=473 Identities=22% Similarity=0.281 Sum_probs=385.2
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHH-HHHhcCC--CCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCC
Q psy9807 11 NGSIIMGDVNEFKDFAKAMVDYVGN-YLENIRD--RRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHW 87 (561)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~ 87 (561)
+-|..+||.++|++++++++|++++ |++++.+ +||.|..+|++++..++..+|++|.+.+++++++++.+.++. ++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~ 106 (515)
T 2jis_A 28 ALPSLAGDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAVIRYSV-KT 106 (515)
T ss_dssp -CCCCSCCHHHHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHHHHHSC-CT
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHHhcCCC-CC
Confidence 3455669999999999999999999 9998775 499999999999999999999999999999999988766555 45
Q ss_pred CCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHH
Q psy9807 88 HSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 167 (561)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~a 167 (561)
.||+||+|++++..+++++++++.+.+|++.+.|..+|.++++|+++++|+++++|++.. .++||+|||+|
T Consensus 107 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~---------~~~~t~ggtea 177 (515)
T 2jis_A 107 GHPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSG---------DGIFCPGGSIS 177 (515)
T ss_dssp TSTTEESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSC---------EEEEESSHHHH
T ss_pred CCCCeEEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCC---------CeEEcCCcHHH
Confidence 699999999999999999999999999999999999999999999999999999999843 78999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccC---CeEEeeC-CCCccChhhHHHHHhh
Q psy9807 168 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLG---KMLDLPK-EFLACSGGKGGGVIQR 240 (561)
Q Consensus 168 nl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~---~v~~v~~-~~g~~d~~~Le~~i~~ 240 (561)
|++|+.++|++..+..+..+. .+ .++..|+++. +|+.++++..|. +++.||+ ++++||+++|+++|++
T Consensus 178 ~~~al~~ar~~~~~~~~~~G~----~~-~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~ 252 (515)
T 2jis_A 178 NMYAVNLARYQRYPDCKQRGL----RT-LPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGM 252 (515)
T ss_dssp HHHHHHHHHHHHCTTHHHHCG----GG-SCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHhhcCc----cc-cCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHH
Confidence 999999998764321111110 00 1244555554 899999988776 8999999 8899999999999988
Q ss_pred hchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccc
Q psy9807 241 KSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWML 320 (561)
Q Consensus 241 ~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~ 320 (561)
+.+.|..|++|++++++|.+|.++|+++|+++|++||+|+|||+||+++.+.+++++..+.+++.+|++++|+|||++
T Consensus 253 --~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~ 330 (515)
T 2jis_A 253 --AEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLA 330 (515)
T ss_dssp --HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTC
T ss_pred --HHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccC
Confidence 777777899999999999999999999999999999999999999999999888888888888899999999999999
Q ss_pred ccccceeEEecCh-hhHHHhhccCCCccccCCC--CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy9807 321 VTFDCSAMWLKDP-SWVVNAFNVDPLYLKHDQQ--GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLA 397 (561)
Q Consensus 321 ~P~g~g~l~~r~~-~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la 397 (561)
+|++||+++++++ ..+...+...++|+..... ....++..++++++||++++++|++++.+|.+|+++++++..+++
T Consensus 331 ~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a 410 (515)
T 2jis_A 331 AGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLA 410 (515)
T ss_dssp CCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999999987 5566566667788854321 112356677889999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchh
Q psy9807 398 KEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRF 477 (561)
Q Consensus 398 ~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~ 477 (561)
+++.+.|+++|+++++.++..+.|+|++.+..+........ +.+
T Consensus 411 ~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~--------------~~~---------------------- 454 (515)
T 2jis_A 411 RYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPD--------------YHE---------------------- 454 (515)
T ss_dssp HHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTT--------------HHH----------------------
T ss_pred HHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchh--------------HHH----------------------
Confidence 99999999999999998877888999875421100000000 000
Q ss_pred hhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECC-EEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 478 EVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRD-VYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 478 ~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
..++.+..+.+.+.+.|.++++.+...+ ..++|++++++.++++||++++++|++++++
T Consensus 455 ----------------~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 455 ----------------RLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp ----------------HHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred ----------------HHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 0012244678889999988877666555 4799999878999999999999999887643
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=4.5e-45 Score=390.25 Aligned_cols=410 Identities=15% Similarity=0.165 Sum_probs=315.8
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHhh-cCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHH
Q psy9807 51 PGYLRPLIPETAPDTPDTWQEVMSDIERVI-MPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTE 129 (561)
Q Consensus 51 ~~~~~~~~~~~~p~~~~~~~~il~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~ 129 (561)
...++..++..+|++|.+.+++++++.+.+ .++..+++||+|++. .+. ..+.+++..++|.+...|..+|...+
T Consensus 7 ~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~~---~~~--~~v~e~~~~a~~~~~~~~~~~~~~~~ 81 (452)
T 2dgk_A 7 KSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQT---WDD--ENVHKLMDLSINKNWIDKEEYPQSAA 81 (452)
T ss_dssp --------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSCC---CCC--HHHHHHHHHTTTCBTTCTTTCHHHHH
T ss_pred hHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeCC---Cch--HHHHHHHHHHhccCCCChhhChhHHH
Confidence 344567778899999999999999999988 688888999999862 111 45788999999988888999999999
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
+|+++++|+++++|++.+.. +...++||+|||+||++++.++++....+.+..+. . ...+++++.. . +++
T Consensus 82 l~~~~~~~la~l~g~~~~~~----~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~--~--~~~~~vi~~~-~h~~~ 152 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKN----GQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGK--P--TDKPNLVCGP-VQICW 152 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTT----SCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTC--C--CSCCEEEESS-CCHHH
T ss_pred HHHHHHHHHHHHhCCCcccc----cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCC--C--CCCcEEEECC-CcHHH
Confidence 99999999999999986410 01248999999999999999988754433222210 0 0012455555 6 899
Q ss_pred HHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc------Cc
Q psy9807 209 EVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK------DV 280 (561)
Q Consensus 209 ~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~------~~ 280 (561)
.++++..|++++.||+ . ++.+|+++|+++|.+ .|++|+++.++|.+|.++|+++|+++|++| |+
T Consensus 153 ~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~--------~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~ 224 (452)
T 2dgk_A 153 HKFARYWDVELREIPMRPGQLFMDPKRMIEACDE--------NTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDI 224 (452)
T ss_dssp HHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCT--------TEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHcCceEEEEecCCCCCeECHHHHHHHHhh--------CCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCC
Confidence 9999999999999999 5 799999999999977 578999999999999999999999999996 99
Q ss_pred eEEechhcccccc--cCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCC
Q psy9807 281 WLHVDAAYAGSAF--ICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDY 358 (561)
Q Consensus 281 ~lhVDaA~gg~~~--~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (561)
|+|||+||+++.. +.+..+..+ .++.+|++++++|||+++|.+||+++++++..+...+...+.|+.. ++
T Consensus 225 ~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-------~~ 296 (452)
T 2dgk_A 225 DMHIDAASGGFLAPFVAPDIVWDF-RLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGG-------QI 296 (452)
T ss_dssp CEEEECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTC-------CE
T ss_pred cEEEEcccHHHHHHhhCccchhhc-CCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCC-------CC
Confidence 9999999998754 344333222 2557899999999999999999999998875443444444566532 12
Q ss_pred CcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc----ccccceeeecccCccccc
Q psy9807 359 RHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE----VLMGLVCFRLKHWQIPLG 433 (561)
Q Consensus 359 ~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~----~~~~~v~f~~~~~~~~~~ 433 (561)
..++++++|++ .++++|++++.+|.+++++++++..++++++.+.|+++++++++.+ +..++|+|++.+..
T Consensus 297 ~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~---- 372 (452)
T 2dgk_A 297 GTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE---- 372 (452)
T ss_dssp EECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTC----
T ss_pred CCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcc----
Confidence 24556778887 7899999999999999999999999999999999999989999865 46677777654310
Q ss_pred cccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHH-HHHHHHHHhCCcE
Q psy9807 434 RRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEIN-EKLLKRINGNGKI 512 (561)
Q Consensus 434 ~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~-~~l~~~L~~~g~~ 512 (561)
.+..+ .++.++|.+.|+.
T Consensus 373 -------------------------------------------------------------~~~~~~~~l~~~L~~~Gi~ 391 (452)
T 2dgk_A 373 -------------------------------------------------------------DPGYTLYDLSERLRLRGWQ 391 (452)
T ss_dssp -------------------------------------------------------------CCSCCHHHHHHHHHHTTCB
T ss_pred -------------------------------------------------------------cccCCHHHHHHHHHhcCCe
Confidence 00112 5788899888873
Q ss_pred ---EEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 513 ---HLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 513 ---~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
+..++...+..++|+++++++ |++|+++++++|+++.+++.+.
T Consensus 392 v~~~~~~~~~~~~~~lRis~~~~~-t~e~id~li~~l~~~~~~~~~~ 437 (452)
T 2dgk_A 392 VPAFTLGGEATDIVVMRIMCRRGF-EMDFAELLLEDYKASLKYLSDH 437 (452)
T ss_dssp CCEEECSTTCTTCEEEEEECCTTC-CHHHHHHHHHHHHHHHHHHHHC
T ss_pred eeeeeCCcccCCeEEEEEEecCCC-CHHHHHHHHHHHHHHHHHHHhC
Confidence 333444456779999988766 6899999999999988776544
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=5.9e-43 Score=378.26 Aligned_cols=414 Identities=19% Similarity=0.197 Sum_probs=324.5
Q ss_pred CCCCCCcccccccCCC-CCCCCCCCHHHHHHHHHHhhcCCCCCCCCccc-cccCCCCCChHHHHHHHHHhhccccccccc
Q psy9807 45 VLPTVEPGYLRPLIPE-TAPDTPDTWQEVMSDIERVIMPGVTHWHSPKF-HAYFPTANSYPAIVADILSDSIACIGFTWI 122 (561)
Q Consensus 45 ~~~~~~~~~~~~~~~~-~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~ 122 (561)
..|...+.++++.+|. .+|++|.+++++++++.+.+.. ..||++ ++.+.+.. ++..+.+++..++|.+...|.
T Consensus 14 ~~~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l----~gnp~~~l~s~~t~~-~~~~v~~~l~~~~~~~~~~~~ 88 (502)
T 3hbx_A 14 VHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELML----DGNPRLNLASFVTTW-MEPECDKLIMSSINKNYVDMD 88 (502)
T ss_dssp CSCTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGG----SCCGGGBTTCCSCCC-CCHHHHHHHHHTTTCBTTCTT
T ss_pred ccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhcc----CCCCCceeccccCCC-CCHHHHHHHHHHhccCCCChh
Confidence 4456678899999998 9999999999999999987642 367885 33332222 334577888899999888899
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
.+|.+.++|+++++|+++++|++... .....|++|+|||+||+.++.+++....++.+..+.+.. .+.+++.
T Consensus 89 ~~p~~~~le~~~~~~la~l~g~~~~~----~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~----~~~vi~~ 160 (502)
T 3hbx_A 89 EYPVTTELQNRCVNMIAHLFNAPLEE----AETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVD----KPNIVTG 160 (502)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCCS----SCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCS----CCEEEEE
T ss_pred cChhHHHHHHHHHHHHHHHhCCCccc----ccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCC----CcEEEEc
Confidence 99999999999999999999998210 112357899999999999999988776554433232110 1123332
Q ss_pred ccc-chHHHHHHhccCCeEEeeC-CC-CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc-
Q psy9807 203 PAC-TELEVVMLDWLGKMLDLPK-EF-LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK- 278 (561)
Q Consensus 203 ~s~-~s~~kaa~~~g~~v~~v~~-~~-g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~- 278 (561)
... +++.++++..|++++.||+ ++ +.||+++|+++|.+ .|.+|+++.++|.+|.++|+++|+++|++|
T Consensus 161 ~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--------~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~ 232 (502)
T 3hbx_A 161 ANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDE--------NTICVAAILGSTLNGEFEDVKLLNDLLVEKN 232 (502)
T ss_dssp TTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCT--------TEEEEEEEBSCTTTCCBCCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhh--------CCEEEEEecCCCCCCcccCHHHHHHHHHHhh
Confidence 223 8899999999999999999 54 89999999999987 588999999999999999999999999999
Q ss_pred -----CceEEechhcccccc--cCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCC
Q psy9807 279 -----DVWLHVDAAYAGSAF--ICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 279 -----~~~lhVDaA~gg~~~--~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
|+|+|||+||+++.. +.+..+..+. ++.+|++++++|||+++|.++|++++++...+...+...+.|+....
T Consensus 233 ~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~-~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~ 311 (502)
T 3hbx_A 233 KETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ 311 (502)
T ss_dssp HHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT-STTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCE
T ss_pred hccCCCCeEEEECCccchhhhhhCcccccccC-CCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCC
Confidence 999999999997653 3555544333 55789999999999999999999999988766555555667764321
Q ss_pred CCCCCCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-ccccceeeecccCc
Q psy9807 352 QGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCFRLKHWQ 429 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~~~v~f~~~~~~ 429 (561)
..+++.++|+. .++++|++++.+|.+++.+++++..+++++|.+.|+++++|+++.+ +..++|+|++.+.
T Consensus 312 -------~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~- 383 (502)
T 3hbx_A 312 -------PTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDS- 383 (502)
T ss_dssp -------EECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSC-
T ss_pred -------CCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCC-
Confidence 23456677775 7899999999999999999999999999999999999988999877 7788877766431
Q ss_pred cccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHH-HHHHHHHHHh
Q psy9807 430 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEI-NEKLLKRING 508 (561)
Q Consensus 430 ~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~-~~~l~~~L~~ 508 (561)
... ..++.++|.+
T Consensus 384 ------------------------------------------------------------------~~~~~~~l~~~L~~ 397 (502)
T 3hbx_A 384 ------------------------------------------------------------------SCHTEFEISDMLRR 397 (502)
T ss_dssp ------------------------------------------------------------------SSCCHHHHHHHHHT
T ss_pred ------------------------------------------------------------------CcCCHHHHHHHHHh
Confidence 111 2378899999
Q ss_pred CCcEEEE---eeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 509 NGKIHLV---PSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 509 ~g~~~~~---~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
.|.++.. ++...+..++|++++. .++++|++++++.|+++.+++.+
T Consensus 398 ~Gi~v~~~~~p~~~~~~~~lRisv~~-~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 398 YGWIVPAYTMPPNAQHITVLRVVIRE-DFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp TTCBCCEEECCTTCTTCEEEEEECCT-TCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEeeccCCcccCCceEEEEEeCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9886432 3344567899999774 66889999999999998877653
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-37 Score=332.88 Aligned_cols=390 Identities=15% Similarity=0.168 Sum_probs=295.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhhcC-CCCCCCCccccccCCCCC-ChHHHHHHHHHhhccccccccccChhhHHHHHHHH
Q psy9807 58 IPETAPDTPDTWQEVMSDIERVIMP-GVTHWHSPKFHAYFPTAN-SYPAIVADILSDSIACIGFTWIASPACTELEVVML 135 (561)
Q Consensus 58 ~~~~~p~~~~~~~~il~~~~~~~~~-~~~~~~~p~~~~~~~~~~-~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~ 135 (561)
....+|++|.+.+++++++.+.... ....|.||+|++++..++ .....+.+.+....+.+...|..+|...++|+++.
T Consensus 34 ~~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (497)
T 3mc6_A 34 NFPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVV 113 (497)
T ss_dssp CCSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHH
Confidence 3467899999999999999987753 567799999999875443 33445666666666667788999999999999999
Q ss_pred HHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHh
Q psy9807 136 DWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLD 214 (561)
Q Consensus 136 ~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~ 214 (561)
+|+++++|++.. ...+++|+|||+||..++.+++++...+ +++. .+.+++.... .++.+++..
T Consensus 114 ~~la~~~g~~~~-------~~~~~~~~ggt~a~~~a~~a~~~~~~~~-----~g~~----~~~Vi~~~~~h~~~~~~~~~ 177 (497)
T 3mc6_A 114 SMVLRMFNAPSD-------TGCGTTTSGGTESLLLACLSAKMYALHH-----RGIT----EPEIIAPVTAHAGFDKAAYY 177 (497)
T ss_dssp HHHHHHTTCCTT-------TCCEEEESSHHHHHHHHHHHHHHHHHHH-----SCCS----SCEEEEETTSCHHHHHHHHH
T ss_pred HHHHHHhCCCCC-------CCeEEEcCcHHHHHHHHHHHHHHHHHhc-----CCCC----CceEEEeCCccHHHHHHHHH
Confidence 999999999821 1378999999999999999988764322 1100 1234444444 888999999
Q ss_pred ccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhccccc
Q psy9807 215 WLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSA 292 (561)
Q Consensus 215 ~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~ 292 (561)
.|.+++.||+ + ++++|+++|+++|.+ .+.+|+++.+++.+|.++|+++|+++|++||+|+|||+||+++.
T Consensus 178 ~G~~~~~v~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~ 249 (497)
T 3mc6_A 178 FGMKLRHVELDPTTYQVDLGKVKKFINK--------NTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFI 249 (497)
T ss_dssp SCCEEEEECBCTTTCSBCTTTTGGGCCS--------SEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHH
T ss_pred cCCeEEEEecCcccCcCCHHHHHHHHhh--------CCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhh
Confidence 9999999999 5 789999999999977 58899999999999999999999999999999999999999765
Q ss_pred cc---------CccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccc
Q psy9807 293 FI---------CPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQI 363 (561)
Q Consensus 293 ~~---------~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (561)
.. .|.+..... .+|+++.++|||+++|.++|++++++.......+...+.|... .+...++
T Consensus 250 ~~f~~~~~~~~~~~~~~~~~---g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 319 (497)
T 3mc6_A 250 VSFMEKAGYKNLPLLDFRVP---GVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGG-------LYGSPTL 319 (497)
T ss_dssp HGGGTTTTCCSCCCCSTTST---TCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTS-------CBCCSSS
T ss_pred hhhhhhhcccCCccccccCC---CCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCC-------CcCCcCc
Confidence 42 112222223 3599999999999999999999998865433222222333211 1122333
Q ss_pred cCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeccccccceeeecccCccccccccchhhH
Q psy9807 364 PLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS-DDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKL 441 (561)
Q Consensus 364 ~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~ 441 (561)
.++|.. ..+++|++++.++..++++++++..++++++++.|++ +|+++++.++..++++|+..+
T Consensus 320 ~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~-------------- 385 (497)
T 3mc6_A 320 AGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKT-------------- 385 (497)
T ss_dssp CSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTT--------------
T ss_pred ccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCC--------------
Confidence 344432 2456899999999999999999999999999999999 699999877777777764321
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECC
Q psy9807 442 WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRD 521 (561)
Q Consensus 442 w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g 521 (561)
.+ ..++.+.|.+.|..+... ..
T Consensus 386 -----------------------------------------------------~~--~~~l~~~L~~~Gi~v~~~---~~ 407 (497)
T 3mc6_A 386 -----------------------------------------------------LN--IHELSDRLSKKGWHFNAL---QK 407 (497)
T ss_dssp -----------------------------------------------------TT--HHHHHHHHHTTTCBCEEC---CS
T ss_pred -----------------------------------------------------CC--HHHHHHHHHhCCEEEecC---CC
Confidence 11 347888898888654322 12
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 522 VYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 522 ~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
...+|++++ .++++|+++++++|+++.+++.+
T Consensus 408 ~~~~ri~~~--~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 408 PVALHMAFT--RLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp SCCEEEECC--TTTTCTHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEe--CCCHHHHHHHHHHHHHHHHHHHh
Confidence 236799877 45778999999999998877643
No 11
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=7.4e-37 Score=331.91 Aligned_cols=393 Identities=12% Similarity=0.112 Sum_probs=303.5
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCC-CChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHH
Q psy9807 60 ETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTA-NSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWL 138 (561)
Q Consensus 60 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~l 138 (561)
..+|++|.+.+++++++.+.+.++..+|.+|+|++++..+ +.++..+.+.+....+.+...+..+|...++|+++.+|+
T Consensus 69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~l 148 (514)
T 3mad_A 69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMT 148 (514)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHH
Confidence 5689999999999999999887888889999999987644 455677888888888888888999999999999999999
Q ss_pred HHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccC
Q psy9807 139 GKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLG 217 (561)
Q Consensus 139 a~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~ 217 (561)
++++|++.+ .+...|+||+|||+||..++.+++.....+. +. ..+++++.... .++.++++..|.
T Consensus 149 a~~~g~~~~-----~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~---g~------~~d~Vi~~~~~~~~~~~~~~~~G~ 214 (514)
T 3mad_A 149 AHMLGGDAA-----GGTVCGTVTSGGTESLLLAMKTYRDWARATK---GI------TAPEAVVPVSAHAAFDKAAQYFGI 214 (514)
T ss_dssp HHHTTGGGG-----TSCCEEEEESSHHHHHHHHHHHHHHHHHHHH---CC------SSCEEEEETTSCTHHHHHHHHHTC
T ss_pred HHHcCCCCc-----cCCcceEEcCcHHHHHHHHHHHHHHHhhhhc---CC------CCCeEEEeCccchHHHHHHHHcCC
Confidence 999999841 0013569999999999999999887643220 10 01234444444 889999999999
Q ss_pred CeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhccccccc--
Q psy9807 218 KMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFI-- 294 (561)
Q Consensus 218 ~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~-- 294 (561)
+++.||. .++++|+++|+++|++ .+.+|+++.+++.+|.++|+++|+++|++||+|+|||+||+++...
T Consensus 215 ~v~~v~~~~~~~~d~~~Le~~i~~--------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~ 286 (514)
T 3mad_A 215 KLVRTPLDADYRADVAAMREAITP--------NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWA 286 (514)
T ss_dssp EEEEECBCTTSCBCHHHHHHHCCT--------TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHH
T ss_pred eeEEeeeCCCCCCCHHHHHHHhcc--------CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhH
Confidence 9999999 8899999999999977 5788999999999999999999999999999999999999976541
Q ss_pred ------CccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC
Q psy9807 295 ------CPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR 368 (561)
Q Consensus 295 ------~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~ 368 (561)
.+.+..... .+|++++++|||+++|.++|++++++.......+.....|.. + .+...++.+++.
T Consensus 287 ~~~g~~~~~~~~~~~---g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~gs~~ 356 (514)
T 3mad_A 287 ERLGYPVPPFDFRLE---GVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPG-----G--LYFSPTFAGSRP 356 (514)
T ss_dssp HHTTCCCCCCSTTST---TCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTT-----C--SEEESSSCSSCC
T ss_pred HhcCCCCCcccccCC---CCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCC-----C--cccCCccCCCCc
Confidence 122222223 459999999999999999999999887554322222222211 0 122234445555
Q ss_pred cc-hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHH
Q psy9807 369 FR-SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRL 447 (561)
Q Consensus 369 ~~-al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~ 447 (561)
.. .+++|++++.++..++++++++..++++++.+.|+++|+++++.++ .+++.|+..
T Consensus 357 ~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~--------------------- 414 (514)
T 3mad_A 357 GALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASD--------------------- 414 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECS---------------------
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCC---------------------
Confidence 33 5789999999999999999999999999999999999999987655 335444221
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEE
Q psy9807 448 LGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRM 527 (561)
Q Consensus 448 ~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~ 527 (561)
+.+ ..++.++|.++|..+ .+. .....+|+
T Consensus 415 ----------------------------------------------~~~--~~~l~~~L~~~Gi~v-~g~--~~~~~~Ri 443 (514)
T 3mad_A 415 ----------------------------------------------ELN--IYQVMEEMAGRGWRL-NGL--HRPPAFHV 443 (514)
T ss_dssp ----------------------------------------------SSC--HHHHHHHHHTTTCBC-EEE--TTTTEEEE
T ss_pred ----------------------------------------------CCC--HHHHHHHHHhcCCEe-ccC--CCCCeEEE
Confidence 111 347888999888655 222 22347999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9807 528 AVCSRYSESSDMIYSWNEIKTLTEELLKEE 557 (561)
Q Consensus 528 ~~~~~~t~~~di~~l~~~l~~~~~~~~~~~ 557 (561)
+++++++++++++++++.|+++.+++.++.
T Consensus 444 ~~~~~~~~~e~i~~~l~~L~~~l~~~~~~~ 473 (514)
T 3mad_A 444 ALTLRHTEPGVVDRFLADLQDAVAQVRAHP 473 (514)
T ss_dssp ECCGGGGSTTHHHHHHHHHHHHHHHHHHCT
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999889898999999999999988776543
No 12
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=100.00 E-value=4.7e-38 Score=328.57 Aligned_cols=300 Identities=13% Similarity=0.066 Sum_probs=231.0
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCC-----------------CCccccccCCCCCChHHHHHHHHHhhccccccccc
Q psy9807 60 ETAPDTPDTWQEVMSDIERVIMPGVTHW-----------------HSPKFHAYFPTANSYPAIVADILSDSIACIGFTWI 122 (561)
Q Consensus 60 ~~~p~~~~~~~~il~~~~~~~~~~~~~~-----------------~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~ 122 (561)
..+|++|.+-++|...+.+.-.-...+| -.||||||++++ ++++|++.+ +. .|.
T Consensus 21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~----~~-~~~ 91 (450)
T 3bc8_A 21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV----QP-KAA 91 (450)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC-----------CC-SBH
T ss_pred ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh----Cc-ccc
Confidence 3589999999999988887533233333 247999999876 555687776 33 788
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh-HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS-EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT-~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
.+|....+|+.+..|+.+++|+|+. .++++++|+| +++.+++.++|+... ..+.++
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~--------~~~~lV~GaT~~~~a~~L~aar~~~~---------------~~~~vi 148 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSV--------ASCFVVPMATGMSLTLCFLTLRHKRP---------------KAKYII 148 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTC--------CEEEEESSCHHHHHHHHHHHHHHHCT---------------TCCEEE
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC--------ceEEEECCHHHHHHHHHHHHcchhhc---------------CCCEEE
Confidence 9999999999999999999999976 3569999998 888888888887421 013455
Q ss_pred eccc--chHHHHHHhccCCeEEeeC----CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 202 SPAC--TELEVVMLDWLGKMLDLPK----EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 202 ~~s~--~s~~kaa~~~g~~v~~v~~----~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+... .|+.||+.+.|...+.|++ +.+.||+++|+++|++ +.. ..+.+|+++.+++.+|.+|||++|+++|
T Consensus 149 v~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~--~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia 224 (450)
T 3bc8_A 149 WPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQE--LGP--EHILCLHSTTACFAPRVPDRLEELAVIC 224 (450)
T ss_dssp EECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHH--HCG--GGEEEEEEESSCCTTBCCCCHHHHHHHH
T ss_pred EECCcHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHh--cCC--CCEEEEEEECCcCCCceecCHHHHHHHH
Confidence 5554 9999999999998777655 5689999999999988 542 2578888888888888999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCc--cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGV--ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi--~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
++||+|+|||+|||+...+.++.. ..++ +.||+++.|+|||+++|+++++++++++..+..... .|....
T Consensus 225 ~~~gi~l~VD~A~G~~~~~~~~l~--~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~---~~~g~~--- 296 (450)
T 3bc8_A 225 ANYDIPHVVNNAYGLQSSKCMHLI--QQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISK---MYPGRA--- 296 (450)
T ss_dssp HHHTCCEEEECTTTTTCHHHHHHH--HHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHH---HSCSCB---
T ss_pred HHCCCeEEEECCCchhhhhhHhHH--HHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHHH---HhhcCC---
Confidence 999999999999998665432211 1234 578999999999999999999999998876654422 232100
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeccc
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD---RFEVIYEV 416 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---g~~l~~~~ 416 (561)
. ...++++|.++..+|.+++++.+++..++++++++.|++++ ++.++..+
T Consensus 297 -----------s--~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~ 349 (450)
T 3bc8_A 297 -----------S--ASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTP 349 (450)
T ss_dssp -----------C--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCT
T ss_pred -----------c--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCc
Confidence 0 12369999999999999999999999999999999999988 88887654
No 13
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=100.00 E-value=5.8e-33 Score=296.74 Aligned_cols=333 Identities=13% Similarity=0.066 Sum_probs=239.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCC
Q psy9807 19 VNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPT 98 (561)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~ 98 (561)
+..|.+.++++++...++++++-. ...+|++|.+.+++.+.+.+..... ...|+++..+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~lp~~g~~~~~i~~~~~~~~~~~-----~~~yld~aa~ 89 (456)
T 2z67_A 31 PKNMEKRGELVLNEYLKEIEDVFN----------------HRKIPENGIDDEKIKLFLKFLSMMD-----TDKDPKSVRI 89 (456)
T ss_dssp CHHHHHHHHHHHHHHTHHHHHHHH----------------HCSCCSSCCCHHHHHHHHHHHHTTB-----GGGCTTCEEC
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhc----------------cCCCCCCCCCHHHHHHHHHHHHhcc-----cccccccccc
Confidence 568999999998888888776321 1346888999888888776653321 1235554444
Q ss_pred CCChHHHHHHHHHh----h----------ccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCCh
Q psy9807 99 ANSYPAIVADILSD----S----------IACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTA 164 (561)
Q Consensus 99 ~~~~~~~~~~~l~~----~----------~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~gg 164 (561)
++.+..++..+... . +..+. .|..+|.+.++++++++|+++++|+++ . ++||+||
T Consensus 90 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~---------~-~~~t~g~ 158 (456)
T 2z67_A 90 GEREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGASIMYALTNKILESFFKQLGLNV---------H-AIATPIS 158 (456)
T ss_dssp SSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHHHHHHHHHHHHHHHHHHTTCCC---------E-EEEESSC
T ss_pred ccccccccccccCccccccCCCccHHHHHHhhCc-ccccCcHHHHHHHHHHHHHHHHcCCCC---------C-EEEeCcH
Confidence 43333322222211 1 11222 566777889999999999999999974 2 7999999
Q ss_pred h-HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc-c-chHHHHHHhccCCeEEeeC----CCCccChhhHHHH
Q psy9807 165 S-EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA-C-TELEVVMLDWLGKMLDLPK----EFLACSGGKGGGV 237 (561)
Q Consensus 165 T-~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s-~-~s~~kaa~~~g~~v~~v~~----~~g~~d~~~Le~~ 237 (561)
| ++|+.++.+++... + ++.+++++ . .|+.++++..|.+++.+|. +++.+|+++|+++
T Consensus 159 te~a~~~al~~~~~~~------~----------~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~ 222 (456)
T 2z67_A 159 TGMSISLCLSAARKKY------G----------SNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENA 222 (456)
T ss_dssp HHHHHHHHHHHHHHHH------C----------CCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc------C----------CCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCcCHHHHHHH
Confidence 9 67877887765421 1 23445444 3 8889999888999888775 5679999999999
Q ss_pred HhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccc-cCccccccccCccccceeeecCC
Q psy9807 238 IQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAF-ICPENRYLMKGVELADSFNFNPH 316 (561)
Q Consensus 238 i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~-~~~~~~~~~~gi~~aDsi~~~~H 316 (561)
|++ +...+ ++++|+.+.+++.+|.++|+++|+++|++||+|+|||+||++... ..|.....+.+ .+|++++++|
T Consensus 223 i~~--~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~~s~h 297 (456)
T 2z67_A 223 IKK--EIELG-NRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVVSSSD 297 (456)
T ss_dssp HHH--HHHTT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEEEEHH
T ss_pred HHH--HhhCC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEEEcCC
Confidence 943 22122 577888899999999999999999999999999999999986554 22322222222 5799999999
Q ss_pred ccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy9807 317 KWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISL 396 (561)
Q Consensus 317 K~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~l 396 (561)
||+++|.++|+++++++..+... .+.|.... + ...++.+|.++..++.++++++.++..++
T Consensus 298 K~~~~p~g~G~l~~~~~~~~~~l---~~~~~g~~---------------~-~~~~~~~~aal~~l~~~~~~~~~~~~~~~ 358 (456)
T 2z67_A 298 KNLLTPIGGGLVYSTDAEFIKEI---SLSYPGRA---------------S-ATPVVNTLVSLLSMGSKNYLELVKNQKNS 358 (456)
T ss_dssp HHHCCCSSCEEEEESCHHHHHHH---HTTSCSCB---------------C-SHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCeEEEEEcCHHHHhhc---CcCCCCCC---------------C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999876555432 22332110 0 01378899999999999999999999999
Q ss_pred HHHHHHHHhcCC---CeEEeccccccceeeec
Q psy9807 397 AKEFEQLVRSDD---RFEVIYEVLMGLVCFRL 425 (561)
Q Consensus 397 a~~l~~~l~~~~---g~~l~~~~~~~~v~f~~ 425 (561)
++++.+.|+++| |+.++.++ ++++|++
T Consensus 359 ~~~l~~~L~~~~~~~g~~v~~~~--~~v~~~~ 388 (456)
T 2z67_A 359 KKLLDELLNDLSKKTGGKFLDVE--SPIASCI 388 (456)
T ss_dssp HHHHHHHHHHHHHHSSCCBCCCC--CSSEEEE
T ss_pred HHHHHHHHHhcccccCCEecCCC--CeEEEEE
Confidence 999999999986 76666544 7777755
No 14
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.4e-30 Score=271.51 Aligned_cols=380 Identities=16% Similarity=0.174 Sum_probs=279.7
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHH
Q psy9807 61 TAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGK 140 (561)
Q Consensus 61 ~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~ 140 (561)
.+|+.|.+.+++++.+.+.. +...++.+|.|+++..+++.+ .+ .+.+...+..+...+...|...++++++.+|+++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~ 80 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYR-SLDLKYEDGNIFGSMCSNVLP-IT-RKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGS 80 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHH-TTSCCGGGTCBCSCSCCCCCT-HH-HHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCeEEEecCCCcH-HH-HHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHH
Confidence 57999999999999999855 556678899999999765544 33 4455555555444455667889999999999999
Q ss_pred hcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCe
Q psy9807 141 MLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKM 219 (561)
Q Consensus 141 l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v 219 (561)
++|.+++ ..+||+|||+||..++.+++.........+. . .+.++.+++.... .++.+++...|.++
T Consensus 81 ~~~~~~~---------~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~---~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~ 147 (397)
T 3f9t_A 81 LLNNKDA---------YGHIVSGGTEANLMALRCIKNIWREKRRKGL---S-KNEHPKIIVPITAHFSFEKGREMMDLEY 147 (397)
T ss_dssp HTTCTTC---------EEEEESCHHHHHHHHHHHHHHHHHHHHHTTC---C-CCSSCEEEEETTCCTHHHHHHHHHTCEE
T ss_pred HhCCCCC---------CEEEecCcHHHHHHHHHHHHHHHHhhhhhcc---c-CCCCeEEEECCcchhHHHHHHHHcCcee
Confidence 9999764 6799999999999999988765322211110 0 0112344444444 78888888889999
Q ss_pred EEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccc
Q psy9807 220 LDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPEN 298 (561)
Q Consensus 220 ~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~ 298 (561)
+.+|. .++.+|+++|+++|++ . .+.+|+++.+++.+|.+.|+++|.++|++||+|+|+|+||+++.+.....
T Consensus 148 ~~v~~~~~~~~d~~~l~~~i~~--~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~ 220 (397)
T 3f9t_A 148 IYAPIKEDYTIDEKFVKDAVED--Y-----DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDD 220 (397)
T ss_dssp EEECBCTTSSBCHHHHHHHHHH--S-----CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCG
T ss_pred EEEeeCCCCcCCHHHHHHHHhh--c-----CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccc
Confidence 99999 8899999999999976 2 46678888899999999999999999999999999999998764421110
Q ss_pred ---------cccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-
Q psy9807 299 ---------RYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR- 368 (561)
Q Consensus 299 ---------~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~- 368 (561)
...+. . .+|++++++||++++|.++|++++++..... .+....+|+.... ......++.
T Consensus 221 ~~~~~~~~~~~~~~-~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~~~ 289 (397)
T 3f9t_A 221 KYKKKGVNYKFDFS-L-GVDSITIDPHKMGHCPIPSGGILFKDIGYKR-YLDVDAPYLTETR--------QATILGTRVG 289 (397)
T ss_dssp GGCCTTCCCCCSGG-G-TCSEEECCTTTTTCCCSSCEEEEESSGGGGG-GTCEECTTSSSSE--------ECSSCSSCCS
T ss_pred cccccccccccccc-c-cCCeEEEccccccCCCCCceEEEEeCHHHHH-hhccCCccccCCC--------cccccccccc
Confidence 00011 1 5699999999999999999999998765442 2332244443211 111223333
Q ss_pred cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHh
Q psy9807 369 FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLL 448 (561)
Q Consensus 369 ~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~ 448 (561)
...+.+|++++.++..++++++++..++++++.+.|++. +++++.++..+.++|+.
T Consensus 290 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~----------------------- 345 (397)
T 3f9t_A 290 FGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIED----------------------- 345 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEEC-----------------------
T ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEe-----------------------
Confidence 356788999999999999999999999999999999998 88877666666655532
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEE
Q psy9807 449 GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMA 528 (561)
Q Consensus 449 g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~ 528 (561)
.+ ..++.+.|.+.|... .+.. ...++|++
T Consensus 346 --------------------------------------------~~----~~~~~~~l~~~gi~v-~~~~--~~~~~Ri~ 374 (397)
T 3f9t_A 346 --------------------------------------------ED----YKEVCKKLRDRGIYV-SVCN--CVKALRIV 374 (397)
T ss_dssp --------------------------------------------TT----HHHHHHHHHHTTCBC-EECS--SSSEEEEE
T ss_pred --------------------------------------------CC----HHHHHHHHHhCCeEE-eccC--CCCEEEEE
Confidence 11 346788888887553 3322 23689999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHH
Q psy9807 529 VCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 529 ~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+. ..++++|+++++++|+++.
T Consensus 375 ~~-~~~~~e~i~~~~~~l~~~l 395 (397)
T 3f9t_A 375 VM-PHIKREHIDNFIEILNSIK 395 (397)
T ss_dssp CC-TTCCHHHHHHHHHHHHHHC
T ss_pred Ec-CCCCHHHHHHHHHHHHHhh
Confidence 76 5668899999999998764
No 15
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.95 E-value=8.5e-26 Score=242.38 Aligned_cols=393 Identities=12% Similarity=0.020 Sum_probs=256.6
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccc-cChhhHH
Q psy9807 51 PGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWI-ASPACTE 129 (561)
Q Consensus 51 ~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-~sp~~~~ 129 (561)
|+.++...+..+| +.+-.+++..+.+.-..+...+.+..|++ ...+...|.++..+.....+-+.+... .++...+
T Consensus 31 p~~~~~~~~~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (474)
T 1wyu_B 31 PKEHLREVPPRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALR 107 (474)
T ss_dssp CGGGBCSSCCCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHH
T ss_pred CHHHhccCCCCCC--CCCHHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHH
Confidence 3444433344677 68889999998887665554455667777 333344455555555442222222333 5788889
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
++.++.+|+++++|.+. ..++|+|||+|+..|+.++|.....+ ++ . ....++++..+. .+.
T Consensus 108 l~~~l~~~la~~~g~~~----------~~~~~~ggt~a~~~al~~~~~~~~~~---Gd-~----~~r~~Vlv~~~~h~~~ 169 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDA----------ITLEPAAGAHGELTGILIIRAYHEDR---GE-G----RTRRVVLVPDSAHGSN 169 (474)
T ss_dssp HHHHHHHHHHHHHTCSE----------EECCCSSHHHHHHHHHHHHHHHHHHT---TC-T----TTCCEEEEETTSCTHH
T ss_pred HHHHHHHHHHHHHCCCc----------eeecChHHHHHHHHHHHHHHHHHHhc---CC-c----cCCCEEEEeCCcChhh
Confidence 99999999999999974 35688999999999998887643221 00 0 001245555544 777
Q ss_pred HHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc-cCHHHHHHHHhhcCceEEech
Q psy9807 209 EVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF-DCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 209 ~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i-dpl~eI~~ia~~~~~~lhVDa 286 (561)
.+++...|.+++.||+ +++.+|+++|+++|.+ .+.+|+++..+ .+|.+ +|+++|+++|++||+|+|+|+
T Consensus 170 ~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~--------~t~~v~~~~pn-~~G~~~~~l~~i~~l~~~~g~~li~De 240 (474)
T 1wyu_B 170 PATASMAGYQVREIPSGPEGEVDLEALKRELGP--------HVAALMLTNPN-TLGLFERRILEISRLCKEAGVQLYYDG 240 (474)
T ss_dssp HHHHHHTTCEEEEECBCTTSSBCHHHHHHHCST--------TEEEEEECSSC-TTSCCCTTHHHHHHHHHHHTCEEEEEG
T ss_pred HHHHHHCCCEEEEecCCCCCCcCHHHHHHhhCC--------CceEEEEECCC-CCcccCCCHHHHHHHHHHcCCEEEEeC
Confidence 7888889999999999 8899999999999976 46677777754 59999 899999999999999999999
Q ss_pred hcccccccCccccccccCccccceeeecCCccccccc-----cceeEEecChhhHHHhhcc------CCCccccCCCCCC
Q psy9807 287 AYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-----DCSAMWLKDPSWVVNAFNV------DPLYLKHDQQGSA 355 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-----g~g~l~~r~~~~l~~~~~~------~~~yl~~~~~~~~ 355 (561)
+|+.+.. .. .+. +...+|++++++||+++.|. ++|++++++. .+. .+.. ...|........
T Consensus 241 a~~~~~~-g~-~~~---~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~-l~~-~l~~~~~~~~g~~~~~~~~~~~- 312 (474)
T 1wyu_B 241 ANLNAIM-GW-ARP---GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH-LAP-YLPVPLVERGEEGFYLDFDRPK- 312 (474)
T ss_dssp GGGGGTT-TT-CCH---HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGG-GGG-GCCSCEEEECSSCEEEECCCTT-
T ss_pred chhhhhc-cC-CCc---ccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHH-HHH-hCCCCeeeccCCeeEecccCcc-
Confidence 9975442 11 111 11136999999999999996 6899999764 222 1210 001111000000
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc-cccceeeecccCcccccc
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV-LMGLVCFRLKHWQIPLGR 434 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~-~~~~v~f~~~~~~~~~~~ 434 (561)
..+.....+.-.......|..++.+|.++++++.++..++++++.+.|++. ++++..+. ....+.++
T Consensus 313 -~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~---------- 380 (474)
T 1wyu_B 313 -SIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQ---------- 380 (474)
T ss_dssp -CCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEB----------
T ss_pred -cCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEE----------
Confidence 000000001111234556777888889999999999999999999999987 88774322 11111111
Q ss_pred ccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEE
Q psy9807 435 RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHL 514 (561)
Q Consensus 435 ~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~ 514 (561)
+ ..+....++.++|.+.|....
T Consensus 381 -------------------------------------------------------~---~~~~~~~~l~~~L~~~Gi~~~ 402 (474)
T 1wyu_B 381 -------------------------------------------------------P---PEGFRALDLAKGLLELGFHPP 402 (474)
T ss_dssp -------------------------------------------------------C---STTCCHHHHHHHHHHTTCCCC
T ss_pred -------------------------------------------------------c---CCCCCHHHHHHHHHHCCcccc
Confidence 1 001113578888888876532
Q ss_pred EeeeE-CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 515 VPSKI-RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 515 ~~~~~-~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
..... ....++|++++. .++++|+++++++|+++.++
T Consensus 403 ~~~~~~~~~~~lRis~~~-~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 403 TVYFPLIVKEALMVEPTE-TEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp EESCSTTSTTCEEECCCT-TSCHHHHHHHHHHHHHHHTS
T ss_pred ccccccccCCEEEEEeec-CCCHHHHHHHHHHHHHHHHh
Confidence 21111 124589999764 55888999999999887654
No 16
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.94 E-value=3.3e-25 Score=232.56 Aligned_cols=354 Identities=11% Similarity=0.003 Sum_probs=236.8
Q ss_pred CCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhH
Q psy9807 87 WHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASE 166 (561)
Q Consensus 87 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~ 166 (561)
..+|.++.+.|++..++..+.+.+...+ . . ..+|...++..++.+++++++|.+.. ...++++|||+
T Consensus 9 ~~~~~~~~~~pgp~~~~~~v~~a~~~~~---~-~-~~~~~~~~~~~~~~~~la~~~~~~~~--------~~v~~~~sgt~ 75 (411)
T 3nnk_A 9 LNPPSRLLMGPGPINADPRVLRAMSSQL---I-G-QYDPAMTHYMNEVMALYRGVFRTENR--------WTMLVDGTSRA 75 (411)
T ss_dssp CCCCCCEEESSSCCCCCHHHHHHHTSCC---C-C-TTCHHHHHHHHHHHHHHHHHHTCCCS--------EEEEEESCHHH
T ss_pred cCCccceeecCCCCCCCHHHHHHhhccc---c-c-cccHHHHHHHHHHHHHHHHHhCCCCC--------cEEEECCCcHH
Confidence 4577777788776655544444333221 1 1 23677778899999999999999754 13578899999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhc
Q psy9807 167 ATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKS 242 (561)
Q Consensus 167 anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~ 242 (561)
|+..++.+.... ++++++.... ++ +..++...|.+++.+|. .++.+|+++|+++|++
T Consensus 76 al~~~~~~~~~~-----------------gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 136 (411)
T 3nnk_A 76 GIEAILVSAIRP-----------------GDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKR-- 136 (411)
T ss_dssp HHHHHHHHHCCT-----------------TCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH--
T ss_pred HHHHHHHHhcCC-----------------CCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhh--
Confidence 998877664210 2345554444 55 67777888999999999 7889999999999976
Q ss_pred hhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc
Q psy9807 243 DREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT 322 (561)
Q Consensus 243 ~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P 322 (561)
. .+.+|+++..++.+|.+.|+++|+++|++||+|+|+|++++.+....+ . .. ..+|++++++|||+++|
T Consensus 137 ~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~-~----~~-~~~d~~~~s~~K~l~~~ 205 (411)
T 3nnk_A 137 I-----RPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLE-T----DV-WGLDAVSAGMQKCLGGP 205 (411)
T ss_dssp H-----CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCC-T----TT-TTCSEEECCSTTTTCCC
T ss_pred C-----CCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccc-h----hc-cCCcEEEecCccccCCC
Confidence 3 467888899999999999999999999999999999999876433221 1 11 13599999999999999
Q ss_pred ccceeEEecChhhHHHhhc---cCCCccccCCCCC----CC-CCCc----------cc-ccCcCC-cchHHHHHHHHHhh
Q psy9807 323 FDCSAMWLKDPSWVVNAFN---VDPLYLKHDQQGS----AP-DYRH----------WQ-IPLGRR-FRSLKLWFVLRLLG 382 (561)
Q Consensus 323 ~g~g~l~~r~~~~l~~~~~---~~~~yl~~~~~~~----~~-~~~~----------~~-~~~sr~-~~al~lw~~l~~~g 382 (561)
.++|++++++. .+..... ..+.|......++ .. .+.+ .. ...+.. .....++.+++.+.
T Consensus 206 ~g~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 284 (411)
T 3nnk_A 206 SGTSPITLSAR-MEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLIL 284 (411)
T ss_dssp SSEEEEEECHH-HHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHH
T ss_pred CceEEEEECHH-HHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999998654 2222111 1122221111000 00 0000 00 001111 12344566677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc---ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHH
Q psy9807 383 VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL---MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRK 459 (561)
Q Consensus 383 ~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~ 459 (561)
..|++++.++..++++++.+.|++. +++++.++. ..+++
T Consensus 285 ~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~------------------------------------- 326 (411)
T 3nnk_A 285 QEGLDYGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLG------------------------------------- 326 (411)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEE-------------------------------------
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEE-------------------------------------
Confidence 7778999999999999999999987 887765432 23333
Q ss_pred HHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC-CcEEEEeeeECCEEEEEEEecCCCCCHHH
Q psy9807 460 QISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN-GKIHLVPSKIRDVYFLRMAVCSRYSESSD 538 (561)
Q Consensus 460 ~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 538 (561)
|.++. .....++.+.|.++ |.....+....+..++|++++++.++++|
T Consensus 327 ------------------------------~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~ 375 (411)
T 3nnk_A 327 ------------------------------VVIPQ-GINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDC 375 (411)
T ss_dssp ------------------------------EECCT-TCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHH
T ss_pred ------------------------------EECCC-CCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHH
Confidence 33321 11134678888776 65544332222345899998677888999
Q ss_pred HHHHHHHHHHHHHHH
Q psy9807 539 MIYSWNEIKTLTEEL 553 (561)
Q Consensus 539 i~~l~~~l~~~~~~~ 553 (561)
+++++++|+++.+++
T Consensus 376 i~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 376 VMTTLSALEAVLNYL 390 (411)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999887653
No 17
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.94 E-value=3.3e-25 Score=232.94 Aligned_cols=353 Identities=12% Similarity=0.032 Sum_probs=231.7
Q ss_pred CCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeE-EeCChh
Q psy9807 87 WHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGV-IQGTAS 165 (561)
Q Consensus 87 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~-~t~ggT 165 (561)
..+|+++.+.|++...+..+.+.+.. . . ....++...++..++.+++++++|.++. ..+ +++|||
T Consensus 7 ~~~~~~~~~~p~p~~~~~~v~~a~~~---~-~-~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~~~~~~~s~t 72 (416)
T 3isl_A 7 LCTPLRTIMTPGPVEVDPRVLRVMST---P-V-VGQFDPAFTGIMNETMEMLRELFQTKNR---------WAYPIDGTSR 72 (416)
T ss_dssp CCCCCCEECSSSSCCCCHHHHHHTTS---C-C-CCTTSHHHHHHHHHHHHHHHHHTTCCCS---------EEEEEESCHH
T ss_pred cCcccceeecCCCcCcCHHHHHHhcc---c-C-CCCccHHHHHHHHHHHHHHHHHhCCCCC---------cEEEecCcHH
Confidence 45667777777665554433333222 1 1 1234456678899999999999998754 334 889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhh
Q psy9807 166 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRK 241 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~ 241 (561)
+++..++.+... + ++++++.... ++ +.+++...|.+++.+|. .++.+|+++|+++|++
T Consensus 73 ~al~~~~~~l~~----------~-------gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~- 134 (416)
T 3isl_A 73 AGIEAVLASVIE----------P-------EDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKK- 134 (416)
T ss_dssp HHHHHHHHHHCC----------T-------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH-
T ss_pred HHHHHHHHHhcC----------C-------CCEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhh-
Confidence 998877665311 0 2345554444 54 77778888999999999 7889999999999984
Q ss_pred chhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccc
Q psy9807 242 SDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV 321 (561)
Q Consensus 242 ~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~ 321 (561)
. ++.+|+++..++.+|.+.|+++|+++|++||+++++|++|+.+....+ . .. ..+|+++.++|||+++
T Consensus 135 -~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~----~~-~~~d~~~~s~~K~l~g 202 (416)
T 3isl_A 135 -V-----KPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVK-V----DE-WKIDAAIGGTQKCLSV 202 (416)
T ss_dssp -H-----CCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCC-T----TT-TTCSEEECCSSSTTCC
T ss_pred -C-----CCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcc-h----hh-cCCCEEEecCccccCC
Confidence 2 467889999999999999999999999999999999999885433221 1 11 1359999999999999
Q ss_pred cccceeEEecChhhHHHhhccC---CCcccc--------CCC--CCCCCC-------Ccccc-cCcCC-cchHHHHHHHH
Q psy9807 322 TFDCSAMWLKDPSWVVNAFNVD---PLYLKH--------DQQ--GSAPDY-------RHWQI-PLGRR-FRSLKLWFVLR 379 (561)
Q Consensus 322 P~g~g~l~~r~~~~l~~~~~~~---~~yl~~--------~~~--~~~~~~-------~~~~~-~~sr~-~~al~lw~~l~ 379 (561)
|.|+|++++++. .+....... .+|... ... ....+. ..... .++.. .....++.+++
T Consensus 203 ~~g~g~~~~~~~-~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 281 (416)
T 3isl_A 203 PSGMAPITYNER-VADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVR 281 (416)
T ss_dssp CSSEEEEEECHH-HHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHH
T ss_pred CCCeEEEEECHH-HHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHH
Confidence 999999998654 222211110 111100 000 000000 00000 11111 22345566777
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc---ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHH
Q psy9807 380 LLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL---MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEY 456 (561)
Q Consensus 380 ~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~ 456 (561)
.+...|++++.++..++++++.+.|++. ++++..++. ..+++|
T Consensus 282 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--------------------------------- 327 (416)
T 3isl_A 282 LVLEEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCV--------------------------------- 327 (416)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEE---------------------------------
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEE---------------------------------
Confidence 7777778999999999999999999995 888775533 233333
Q ss_pred HHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC-CcEEEEeeeECCEEEEEEEecCCCCC
Q psy9807 457 IRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN-GKIHLVPSKIRDVYFLRMAVCSRYSE 535 (561)
Q Consensus 457 ~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~ 535 (561)
+++. +....++.+.|.++ |.....+....+..++|++++.+.++
T Consensus 328 ----------------------------------~~~~-~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~ 372 (416)
T 3isl_A 328 ----------------------------------EIPG-GIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCR 372 (416)
T ss_dssp ----------------------------------ECCT-TCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCS
T ss_pred ----------------------------------eCCC-CCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCc
Confidence 3321 11134778888776 64443332223456899998777777
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy9807 536 SSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 536 ~~di~~l~~~l~~~~~~~ 553 (561)
++++++++++|+++.+++
T Consensus 373 ~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 373 KENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 766999999999887654
No 18
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.93 E-value=5.9e-24 Score=220.14 Aligned_cols=342 Identities=13% Similarity=0.046 Sum_probs=225.5
Q ss_pred ccccCCCCCChHHHHHHHHHhh---ccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDS---IACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEAT 168 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~---~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~an 168 (561)
|+++..+++.++.++..+.... ..+....+..+....++.+++.+++++++|.+++ ..++|+|||+|+
T Consensus 3 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---------~i~~~~g~~~a~ 73 (382)
T 4hvk_A 3 YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG---------TVVFTSGATEAN 73 (382)
T ss_dssp BCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTE---------EEEEESSHHHHH
T ss_pred eecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcC---------eEEEECCchHHH
Confidence 6777766666666554333322 2212223445556678889999999999999754 579999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHh---ccCCeEEeeC-CCCccChhhHHHHHhhhch
Q psy9807 169 LVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLD---WLGKMLDLPK-EFLACSGGKGGGVIQRKSD 243 (561)
Q Consensus 169 l~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~---~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~ 243 (561)
..++.+....... . ++.+++.... .+...++.. .|.+++.+|. +++.+|+++|+++|.+
T Consensus 74 ~~~~~~~~~~~~~----~---------gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 137 (382)
T 4hvk_A 74 NLAIIGYAMRNAR----K---------GKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD--- 137 (382)
T ss_dssp HHHHHHHHHHHGG----G---------CCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT---
T ss_pred HHHHHHhhhhhcC----C---------CCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc---
Confidence 8888775432111 1 1244444434 555555433 5889999999 8889999999999976
Q ss_pred hhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc
Q psy9807 244 REMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF 323 (561)
Q Consensus 244 ~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~ 323 (561)
.+.+|+++..++.+|.+.|+++|.++|++||+ +|+|++|+.+....+ . .. ..+|+++.++||++ +|.
T Consensus 138 -----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~-~----~~-~~~d~~~~s~~K~~-g~~ 204 (382)
T 4hvk_A 138 -----DTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVD-V----EK-IGADMLTISSNDIY-GPK 204 (382)
T ss_dssp -----TEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCC-H----HH-HTCSEEEEESGGGT-SCT
T ss_pred -----CceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCC-c----hh-cCCCEEEEeHHHhc-CCC
Confidence 57789999999999999999999999999999 999999885433221 1 10 13599999999975 577
Q ss_pred cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy9807 324 DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQ 402 (561)
Q Consensus 324 g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~ 402 (561)
|+|++++++...+ . .++.... ...... ..+.. .....+..+++ +..++++++.++..++++++.+
T Consensus 205 g~g~~~~~~~~~~------~-~~~~~~~--~~~~~~----~~~~~~~~~~~~~~al~-~~~~~~~~~~~~~~~~~~~l~~ 270 (382)
T 4hvk_A 205 GVGALWIRKEAKL------Q-PVILGGG--QENGLR----SGSENVPSIVGFGKAAE-ITAMEWREEAERLRRLRDRIID 270 (382)
T ss_dssp TCEEEEEETTCCC------C-CSSCSSC--TGGGTS----CSCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCccCc------C-cccccCC--CcCccc----cCCcCHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHH
Confidence 8999999775311 1 1111100 000000 00111 11222333333 3346889999999999999999
Q ss_pred HHhcCCCeEEecccc---ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhh
Q psy9807 403 LVRSDDRFEVIYEVL---MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 479 (561)
Q Consensus 403 ~l~~~~g~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~ 479 (561)
.|+++|++++..++. .+.++|++
T Consensus 271 ~L~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------------ 296 (382)
T 4hvk_A 271 NVLKIEESYLNGHPEKRLPNNVNVRF------------------------------------------------------ 296 (382)
T ss_dssp HHTTSTTEEECSCSSSBCTTEEEEEE------------------------------------------------------
T ss_pred HHhcCCCeEEeCCccccCCCEEEEEE------------------------------------------------------
Confidence 999999998876542 23444433
Q ss_pred hhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE--C-----------C------EEEEEEEecCCCCCHHHHH
Q psy9807 480 IYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI--R-----------D------VYFLRMAVCSRYSESSDMI 540 (561)
Q Consensus 480 ~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--~-----------g------~~~lR~~~~~~~t~~~di~ 540 (561)
.+.+ ..++.+.|.+.|.....+... . | ..++|+++. +.++++|++
T Consensus 297 -------------~~~~--~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~-~~~t~e~i~ 360 (382)
T 4hvk_A 297 -------------SYIE--GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLG-RYNTDEDVD 360 (382)
T ss_dssp -------------TTCC--HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECC-TTCCHHHHH
T ss_pred -------------CCCC--HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcC-CCCCHHHHH
Confidence 2211 345677777776543322110 0 0 468999976 466888999
Q ss_pred HHHHHHHHHHHHHHH
Q psy9807 541 YSWNEIKTLTEELLK 555 (561)
Q Consensus 541 ~l~~~l~~~~~~~~~ 555 (561)
+++++|+++.+++.+
T Consensus 361 ~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 361 RLLEVLPGVIERLRS 375 (382)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999998877654
No 19
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.93 E-value=5.7e-25 Score=226.42 Aligned_cols=343 Identities=12% Similarity=-0.036 Sum_probs=226.5
Q ss_pred ccccCCCCCChH-HHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHH
Q psy9807 92 FHAYFPTANSYP-AIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLV 170 (561)
Q Consensus 92 ~~~~~~~~~~~~-~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~ 170 (561)
++.+.|++...+ .++..+.....+........+|...++.+++.+++++++|.++. ...++|+|||+|+..
T Consensus 5 ~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--------~~v~~~~g~t~al~~ 76 (362)
T 3ffr_A 5 KIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSN--------YEVLFLASATEIWER 76 (362)
T ss_dssp CEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTT--------EEEEEESCHHHHHHH
T ss_pred ceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEeCCchHHHHH
Confidence 455666655444 44443433333433223346788889999999999999999642 257899999999987
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhc
Q psy9807 171 ALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREM 246 (561)
Q Consensus 171 al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~ 246 (561)
++.+... +++++.... ++ +...+...|.+++.+|. .++.+|+++|+ +.+
T Consensus 77 ~~~~l~~-------------------~~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~~------ 129 (362)
T 3ffr_A 77 IIQNCVE-------------------KKSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VPA------ 129 (362)
T ss_dssp HHHHHCS-------------------SEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CCT------
T ss_pred HHHhccC-------------------CcEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--ccC------
Confidence 7765321 133444443 44 44455667889999999 77899999998 444
Q ss_pred CCceEEEEEecCCCCCccccCHHHHHHHHhhc-CceEEechhcccccccCccccccccCccccceeeecCCccccccccc
Q psy9807 247 CSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK-DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDC 325 (561)
Q Consensus 247 g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~-~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~ 325 (561)
++.+|+++..++.+|.+.|+++|+++|++| |+|+++|++|+.+....+ +..+|+++.++|||+++|.|+
T Consensus 130 --~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~--------~~~~d~~~~s~~K~~~~~~G~ 199 (362)
T 3ffr_A 130 --DAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFD--------WTKIDSVFFSVQKCFGLPAGL 199 (362)
T ss_dssp --TCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCC--------TTSCSEEEEETTSTTCCCSCC
T ss_pred --CccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccC--------hhHCcEEEEecccccCCCCce
Confidence 577888889999999999999999999999 999999999885432211 112699999999999989999
Q ss_pred eeEEecChhhHHHhhc--c----CCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy9807 326 SAMWLKDPSWVVNAFN--V----DPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAK 398 (561)
Q Consensus 326 g~l~~r~~~~l~~~~~--~----~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~ 398 (561)
|++++++. .+..... . ...|+..... ...........+.. +....++.+++.+...+++++.++..++++
T Consensus 200 g~~~~~~~-~~~~~~~~~~gg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 276 (362)
T 3ffr_A 200 GVWILNDR-VIEKSKALLAKRKSIGTYHTIPSM--LEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAA 276 (362)
T ss_dssp EEEEEEHH-HHHHHHHHHHTTCCCCSTTSHHHH--HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred EEEEECHH-HHHHhhhccccCCCCcccccHHHH--HHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 99888653 2222111 1 1111100000 00000000011111 223455666776667778999999999999
Q ss_pred HHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhh
Q psy9807 399 EFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 478 (561)
Q Consensus 399 ~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~ 478 (561)
++.+.|+++|+++++.+.....
T Consensus 277 ~l~~~L~~~~g~~~~~~~~~~~---------------------------------------------------------- 298 (362)
T 3ffr_A 277 LINTYIESSKVFSFGVEDAKLR---------------------------------------------------------- 298 (362)
T ss_dssp HHHHHHHHCSSEEESSSCGGGB----------------------------------------------------------
T ss_pred HHHHHHHHccCceeccCChhhc----------------------------------------------------------
Confidence 9999999999999875321100
Q ss_pred hhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 479 VIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 479 ~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
...+++|...+ ...++.+.|.++|.....+....+..++|+++.. .++++|+++++++|+++
T Consensus 299 -----~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~-~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 299 -----SMTTIVANTTM---LPGEINKILEPFDMAVGAGYGSKKETQIRIANFP-AHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp -----CSSEEEEEESS---CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCT-TSCHHHHHHHHHHHHHH
T ss_pred -----CCceEEEecCC---CHHHHHHHHHHCCeEEecCccccCCCEEEEECCC-CCCHHHHHHHHHHHHHH
Confidence 01113333332 2457889998887555443333345689999775 66889999999999875
No 20
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.93 E-value=9e-25 Score=224.95 Aligned_cols=241 Identities=13% Similarity=0.069 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
.--|..+.+||+.+ |+|.. ...++++|+|.+++..++++..+.. + ..+++++.... .
T Consensus 116 ~ltn~l~ld~L~~~-G~~~~--------~~~flVnGsTgg~lamilaa~r~~r-------p------g~d~VIvpRn~HK 173 (501)
T 3hl2_A 116 KITNSLVLDIIKLA-GVHTV--------ANCFVVPMATGMSLTLCFLTLRHKR-------P------KAKYIIWPRIDQK 173 (501)
T ss_dssp HHHHHHHHHHHHHT-TCTTC--------CEEEEESSCHHHHHHHHHHHHHHHC-------T------TCCEEEEECCCCH
T ss_pred HHHHHHHHHHHHHc-CCCCC--------CcEEEECcHHHHHHHHHHHHcCccc-------C------CCCEEEEecchHH
Confidence 35577889999988 99975 3568889988777666666543310 0 01345555555 9
Q ss_pred hHHHHHHhccCCeEEeeC----CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCC-CccccCHHHHHHHHhhcCce
Q psy9807 207 ELEVVMLDWLGKMLDLPK----EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN-CCAFDCLEEIGQVCRQKDVW 281 (561)
Q Consensus 207 s~~kaa~~~g~~v~~v~~----~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~-tG~idpl~eI~~ia~~~~~~ 281 (561)
|+.+++.+.|...+.|+. +...+|+++|+++|++ . +...++++++..+++ .+.++||++|+++|++||+|
T Consensus 174 Sv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e--~---ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIp 248 (501)
T 3hl2_A 174 SCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQE--L---GPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIP 248 (501)
T ss_dssp HHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHH--H---CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHh--c---CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCe
Confidence 999999999999888876 3478999999999988 3 212333443333333 45779999999999999999
Q ss_pred EEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcc
Q psy9807 282 LHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHW 361 (561)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (561)
+|||.|||+...+.++.....-...+||+++.|+||++.+|.+++++++++++.+..... .|...
T Consensus 249 llVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~---~yPGr------------ 313 (501)
T 3hl2_A 249 HIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISK---MYPGR------------ 313 (501)
T ss_dssp EEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHH---TSCSC------------
T ss_pred EEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHHHH---hCCCC------------
Confidence 999999998765544322111112358999999999999999999999999876655322 22100
Q ss_pred cccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEec
Q psy9807 362 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD---RFEVIY 414 (561)
Q Consensus 362 ~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---g~~l~~ 414 (561)
.-.+.++.+|+++..+|.+||++++++..+++++|++.|++++ |-+++.
T Consensus 314 ----~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~ 365 (501)
T 3hl2_A 314 ----ASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLH 365 (501)
T ss_dssp ----BCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCC
T ss_pred ----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcC
Confidence 0136789999999999999999999999999999999999853 345554
No 21
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.93 E-value=1.8e-23 Score=217.98 Aligned_cols=349 Identities=13% Similarity=0.063 Sum_probs=227.8
Q ss_pred CCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHH
Q psy9807 88 HSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 167 (561)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~a 167 (561)
.++.|+++...++.++.++. .+...+.. ..++.......++.+++++++|.+++ ..++|+|||+|
T Consensus 7 ~~~~yl~~~~~~~~~~~v~~-a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~t~g~t~a 71 (392)
T 2z9v_A 7 ADPVITLTAGPVNAYPEVLR-GLGRTVLY-----DYDPAFQLLYEKVVDKAQKAMRLSNK---------PVILHGEPVLG 71 (392)
T ss_dssp SCCSEECSSSCCCCCHHHHH-HTTSCCCC-----TTSHHHHHHHHHHHHHHHHHTTCSSC---------CEEESSCTHHH
T ss_pred CCcceeecCCCcCCCHHHHH-HHhccccc-----cccHHHHHHHHHHHHHHHHHhCCCCC---------EEEEeCCchHH
Confidence 45678877755555555443 33333322 13455667788899999999998743 67999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH--HHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhch
Q psy9807 168 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL--EVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSD 243 (561)
Q Consensus 168 nl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~--~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~ 243 (561)
+..++.+... + ++++++.... .+. ...+...|.+++.+|. .++.+|+++|+++|++ .
T Consensus 72 ~~~~~~~~~~----------~-------gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~ 132 (392)
T 2z9v_A 72 LEAAAASLIS----------P-------DDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKA--H 132 (392)
T ss_dssp HHHHHHHHCC----------T-------TCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHH--C
T ss_pred HHHHHHHhcC----------C-------CCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhc--C
Confidence 9888766411 0 2245554444 333 3344557889999999 7788999999999964 2
Q ss_pred hhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc
Q psy9807 244 REMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF 323 (561)
Q Consensus 244 ~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~ 323 (561)
..+.+|+.+..++.||.+.|+++|+++|++||+++++|++|+.+....+ +... .+|+++.++|||+++|.
T Consensus 133 ----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~~-~~d~~~~s~sK~~~~~~ 202 (392)
T 2z9v_A 133 ----PEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTH-----PEDC-KADIYVTGPNKCLGAPP 202 (392)
T ss_dssp ----TTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCC-----GGGG-TCSEEEECSSSTTCCCS
T ss_pred ----CCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccc-----cccc-cceEEEecCcccccCCC
Confidence 1466888899999999999999999999999999999999985433211 1111 35999999999999999
Q ss_pred cceeEEecChhhHHHhhccC--C--CccccCCCCCCCCCCcc-cccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy9807 324 DCSAMWLKDPSWVVNAFNVD--P--LYLKHDQQGSAPDYRHW-QIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLA 397 (561)
Q Consensus 324 g~g~l~~r~~~~l~~~~~~~--~--~yl~~~~~~~~~~~~~~-~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la 397 (561)
|+|++++++. .+....... + .|...... ...+... ...++... ....+..+++.+...|++++.++..+++
T Consensus 203 g~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~ 279 (392)
T 2z9v_A 203 GLTMMGVSER-AWAKMKANPLAPRASMLSIVDW--ENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTA 279 (392)
T ss_dssp CCEEEEECHH-HHHHHHTCTTSCCSSTTCSGGG--TTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ceeEEEECHH-HHHHhhhccCCCCceeccHHHH--HhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 9999998643 332221111 1 11110000 0000000 00111111 1234456666666666888999999999
Q ss_pred HHHHHHHhcCCCeEEeccc----cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcc
Q psy9807 398 KEFEQLVRSDDRFEVIYEV----LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS 473 (561)
Q Consensus 398 ~~l~~~l~~~~g~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~ 473 (561)
+++.+.|++. +++++.++ ..++++|
T Consensus 280 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~-------------------------------------------------- 308 (392)
T 2z9v_A 280 KAMRAGVTAM-GLSVWAASDSIASPTTTAV-------------------------------------------------- 308 (392)
T ss_dssp HHHHHHHHHT-TCCBSSSSGGGBCTTEEEE--------------------------------------------------
T ss_pred HHHHHHHHHc-CCeeccCCccccCCceEEE--------------------------------------------------
Confidence 9999999987 88776522 1233333
Q ss_pred CchhhhhhhhhhcceeeecC-CCcHHHHHHHHHHHhC-CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 474 DDRFEVIYEVLMGLVCFRLK-GPNEINEKLLKRINGN-GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 474 ~~~~~~~~~~~~~~v~f~~~-~~~~~~~~l~~~L~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
+++ +.+ ..++.+.|.++ |.....+....+..++|+++..+.++++|+++++++|+++.+
T Consensus 309 -----------------~~~~~~~--~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~ 369 (392)
T 2z9v_A 309 -----------------RTPDGVD--EKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMN 369 (392)
T ss_dssp -----------------ECCTTCC--HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred -----------------ECCCCCC--HHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHH
Confidence 321 111 34678888887 755443332234568999965546788999999999998876
Q ss_pred HH
Q psy9807 552 EL 553 (561)
Q Consensus 552 ~~ 553 (561)
++
T Consensus 370 ~~ 371 (392)
T 2z9v_A 370 AA 371 (392)
T ss_dssp HT
T ss_pred Hc
Confidence 54
No 22
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.93 E-value=3.6e-23 Score=214.72 Aligned_cols=273 Identities=11% Similarity=0.029 Sum_probs=182.5
Q ss_pred ccccCCCCCChHHHHHHHHHhhcc--cccc-ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDSIA--CIGF-TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEAT 168 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n--~~~~-~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~an 168 (561)
|+++..+++.++.++..+....-+ .+.. .|..++.......++.+++++++|.+++ ..++|+|||+|+
T Consensus 3 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~a~ 73 (382)
T 4eb5_A 3 YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG---------TVVFTSGATEAN 73 (382)
T ss_dssp BCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTE---------EEEEESSHHHHH
T ss_pred eeccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEcCchHHHH
Confidence 667766666666665444333221 1111 2444556678889999999999998754 579999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHh---ccCCeEEeeC-CCCccChhhHHHHHhhhch
Q psy9807 169 LVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLD---WLGKMLDLPK-EFLACSGGKGGGVIQRKSD 243 (561)
Q Consensus 169 l~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~---~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~ 243 (561)
..++.+.+..... . ++.+++.... .++..++.. .|.+++.+|. .++.+|+++|+++|.+
T Consensus 74 ~~~~~~l~~~~~~----~---------gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 137 (382)
T 4eb5_A 74 NLAIIGYAMRNAR----K---------GKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD--- 137 (382)
T ss_dssp HHHHHHHHHHHGG----G---------CCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCT---
T ss_pred HHHHHHHHhhccC----C---------CCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcC---
Confidence 9888876532111 1 1234444333 556565543 5788999998 7888999999999876
Q ss_pred hhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc
Q psy9807 244 REMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF 323 (561)
Q Consensus 244 ~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~ 323 (561)
.+.+|+.+..++.||.+.|+++|.++|++||+| ++|++|+.+....+ +... .+|+++.++||+ ++|.
T Consensus 138 -----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~-----~~~~-~~di~~~s~sK~-~g~~ 204 (382)
T 4eb5_A 138 -----DTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVD-----VEKI-GADMLTISSNDI-YGPK 204 (382)
T ss_dssp -----TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCC-----HHHH-TCSEEEEETGGG-TCCS
T ss_pred -----CCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccC-----cccc-CCCEEEeehHHh-cCCC
Confidence 577899999999999999999999999999999 99999984322111 1111 359999999998 4577
Q ss_pred cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy9807 324 DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQ 402 (561)
Q Consensus 324 g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~ 402 (561)
|+|++++++...+ . .++... ... .... ..+.. .....+..+++.+ .++++++.++..++++++.+
T Consensus 205 g~G~~~~~~~~~l------~-~~~~~~---~~~--~~~~-~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~ 270 (382)
T 4eb5_A 205 GVGALWIRKEAKL------Q-PVILGG---GQE--NGLR-SGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIID 270 (382)
T ss_dssp SCEEEEEETTCCC------C-CSSCSS---CTG--GGTS-CSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcccccc------C-ceecCC---Ccc--cccc-CCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHH
Confidence 8999998764211 1 111100 000 0000 01111 1123334445443 34788899999999999999
Q ss_pred HHhcCCCeEEeccc
Q psy9807 403 LVRSDDRFEVIYEV 416 (561)
Q Consensus 403 ~l~~~~g~~l~~~~ 416 (561)
.|+++|++++..++
T Consensus 271 ~L~~~~~~~~~~~~ 284 (382)
T 4eb5_A 271 NVLKIEESYLNGHP 284 (382)
T ss_dssp HHTTSTTEEECSCS
T ss_pred HHhhCCCeEEeCCc
Confidence 99998899887543
No 23
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.92 E-value=4.4e-23 Score=219.00 Aligned_cols=369 Identities=14% Similarity=0.116 Sum_probs=230.7
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCccccccCCCCC---ChHHHHHHHH--Hhhccc-cccccccC
Q psy9807 51 PGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTAN---SYPAIVADIL--SDSIAC-IGFTWIAS 124 (561)
Q Consensus 51 ~~~~~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~l--~~~~n~-~~~~~~~s 124 (561)
|..++.. +..+| +|.+..++++++......+.. +|+.|...+. ..|..+.+++ ...+.. +....+.+
T Consensus 31 p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~ 103 (438)
T 1wyu_A 31 PKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLP-----AHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVS 103 (438)
T ss_dssp CGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCC-----CTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGC
T ss_pred cHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcC-----ccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchhh
Confidence 4566665 77889 889999999998776543221 2333332222 1233333333 122221 11122457
Q ss_pred hhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc
Q psy9807 125 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA 204 (561)
Q Consensus 125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s 204 (561)
+...+++.++.+++++++|.+.. .+++++|||.++..++.+.+. . . ++++++...
T Consensus 104 ~g~~~~~~~~~~~la~~~g~~~~---------~i~~~~g~taa~ea~~~a~~~---~----~---------gd~Viv~~~ 158 (438)
T 1wyu_A 104 QGVLQATFEYQTMIAELAGLEIA---------NASMYDGATALAEGVLLALRE---T----G---------RMGVLVSQG 158 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSEE---------CSCBSSHHHHHHHHHHHHHHH---H----T---------CCEEEEETT
T ss_pred hhHHHHHHHHHHHHHHHhCCCcc---------ceEEeCcHHHHHHHHHHHHhc---C----C---------CCEEEEcCc
Confidence 78889999999999999999754 568999998544333333221 1 0 234555444
Q ss_pred c-chHHHH----HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC
Q psy9807 205 C-TELEVV----MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD 279 (561)
Q Consensus 205 ~-~s~~ka----a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~ 279 (561)
. .+...+ +...|.+++.+|.+++.+|+++ |.+ ++++|++++. +.+|.++|+++|+++|++||
T Consensus 159 ~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~d~~~----i~~--------~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g 225 (438)
T 1wyu_A 159 VHPEYRAVLRAYLEAVGAKLLTLPLEGGRTPLPE----VGE--------EVGAVVVQNP-NFLGALEDLGPFAEAAHGAG 225 (438)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECCBTTBCCCCC----CCT--------TEEEEEEESS-CTTSBCCCHHHHHHHHHHTT
T ss_pred cCHhHHHHHHHHHHHCCCEEEEEcCcCCccCHHH----hCC--------CeEEEEEECC-CCCeEEecHHHHHHHHHHcC
Confidence 4 444433 3557889999998557888887 544 5778888886 99999999999999999999
Q ss_pred ceEEechh-cccccccCccccccccCccccceeeecCCc-----cccccccceeEEecChhhHHHhhccCCCccccC--C
Q psy9807 280 VWLHVDAA-YAGSAFICPENRYLMKGVELADSFNFNPHK-----WMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHD--Q 351 (561)
Q Consensus 280 ~~lhVDaA-~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK-----~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~--~ 351 (561)
+|+|||.. ++.+.+..+ +...+|+++++.|| |+++| ++|++++++. .... + +.++... .
T Consensus 226 ~~vivd~d~~a~g~~~~~-------~~~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~~~-l---~~~~~g~~~~ 292 (438)
T 1wyu_A 226 ALFVAVADPLSLGVLKPP-------GAYGADIAVGDGQSLGLPMGFGGP-HFGFLATKKA-FVRQ-L---PGRLVSETVD 292 (438)
T ss_dssp CEEEEECCTTGGGTBCCH-------HHHTCSEEEEECTTTTCCCGGGCS-CCEEEEECGG-GGGG-C---CSCCEEEEEB
T ss_pred CEEEEEechhhccCcCCC-------ccCCCCEEEECCcccCCCccCCCC-CeeEEEEcHH-HHHh-C---CCceeccccc
Confidence 99996643 322222222 11246999999888 78889 8999998753 2221 2 2221100 0
Q ss_pred CCCCCCCCcccc----------cCcCCc---c-hHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 352 QGSAPDYRHWQI----------PLGRRF---R-SLKLW--FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 352 ~~~~~~~~~~~~----------~~sr~~---~-al~lw--~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
..+...+. +++ ..+... . ...++ ..+..++.+|++++.++..++++++.+.|+++||++++.+
T Consensus 293 ~~~~~~~~-~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 371 (438)
T 1wyu_A 293 VEGRRGFI-LTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTP 371 (438)
T ss_dssp TTSCEEEE-ECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSC
T ss_pred cCCCccee-eeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCC
Confidence 00000000 000 001111 1 12333 3378889999999999999999999999999999998765
Q ss_pred c-cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC
Q psy9807 416 V-LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG 494 (561)
Q Consensus 416 ~-~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~ 494 (561)
. ....++| +..
T Consensus 372 ~~~~~~~~~-------------------------------------------------------------------~~~- 383 (438)
T 1wyu_A 372 KPFFNEFAL-------------------------------------------------------------------ALP- 383 (438)
T ss_dssp SSBCSEEEE-------------------------------------------------------------------ECS-
T ss_pred CCeEEEEEE-------------------------------------------------------------------eCC-
Confidence 2 2222222 221
Q ss_pred CcHHHHHHHHHHHhCCcEE-EEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 495 PNEINEKLLKRINGNGKIH-LVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 495 ~~~~~~~l~~~L~~~g~~~-~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
. ...++.++|.+.|... +.+....+..++|++++ +.++++|+++++++|+++
T Consensus 384 ~--~~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~-~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 384 K--DPEAVRRALAERGFHGATPVPREYGENLALFAAT-ELHEEEDLLALREALKEV 436 (438)
T ss_dssp S--CHHHHHHHHHHTTCCCCEECCTTSCSSEEEEECC-TTCCHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHCCceeccccccccCCCeEEEEec-ccCCHHHHHHHHHHHHHH
Confidence 1 1357888888887554 12222223568999977 677999999999999765
No 24
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.92 E-value=3.7e-24 Score=229.03 Aligned_cols=353 Identities=8% Similarity=0.005 Sum_probs=229.1
Q ss_pred cccccCCCCCChHHH---HHHHHHhhcccccccccc-ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhH
Q psy9807 91 KFHAYFPTANSYPAI---VADILSDSIACIGFTWIA-SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASE 166 (561)
Q Consensus 91 ~~~~~~~~~~~~~~~---~~~~l~~~~n~~~~~~~~-sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~ 166 (561)
.||+....++.+..+ +.+.+....+.+..+|.. .+....+.+++.+++++++|.+++ ..+||+|+|+
T Consensus 69 iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~t~g~t~ 139 (465)
T 3e9k_A 69 IYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEK---------EIALMNALTV 139 (465)
T ss_dssp EECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGG---------GEEECSCHHH
T ss_pred EEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcC---------CEEEECCHHH
Confidence 467666555444333 445554444444434443 233455667789999999999864 6789999998
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch----HHHHHHhccCCe-----EEeeC-CCCccChhhHH
Q psy9807 167 ATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE----LEVVMLDWLGKM-----LDLPK-EFLACSGGKGG 235 (561)
Q Consensus 167 anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s----~~kaa~~~g~~v-----~~v~~-~~g~~d~~~Le 235 (561)
++..++.+..+. + ..+.++++.... .+ +...++..|.++ ..+|. +++.+|+++|+
T Consensus 140 al~~~~~~~~~~--------~------~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~ 205 (465)
T 3e9k_A 140 NLHLLMLSFFKP--------T------PKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDIL 205 (465)
T ss_dssp HHHHHHHHHCCC--------C------SSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHH
T ss_pred HHHHHHHHhccc--------c------CCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHH
Confidence 876666553210 0 001234444444 33 555666677764 34455 77899999999
Q ss_pred HHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecC
Q psy9807 236 GVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNP 315 (561)
Q Consensus 236 ~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~ 315 (561)
++|++ . +..+.+|+.+..++.||.+.|+++|.++|++||+++++|+||+.+....+- .. ..+|++++++
T Consensus 206 ~~i~~--~---~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~-----~~-~~~D~~~~s~ 274 (465)
T 3e9k_A 206 EVIEK--E---GDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYL-----HD-WGVDFACWCS 274 (465)
T ss_dssp HHHHH--H---GGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCH-----HH-HTCCEEEECS
T ss_pred HHHHh--c---CCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCch-----hh-cCCCEEEECc
Confidence 99975 2 115788999999999999999999999999999999999999866543321 11 1359999999
Q ss_pred Ccccc-ccccceeEEecChhhHHHhhccCCCccccCC-------CCCCCCCCcccccCcCC--cchHHHHHHHHHhhHHH
Q psy9807 316 HKWML-VTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQ-------QGSAPDYRHWQIPLGRR--FRSLKLWFVLRLLGVKY 385 (561)
Q Consensus 316 HK~l~-~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~-------~~~~~~~~~~~~~~sr~--~~al~lw~~l~~~g~~g 385 (561)
||+++ +|.++|++++++. ..........+|..... ....+.......+.+.. .....+++++..+...+
T Consensus 275 ~K~l~~gp~~~g~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~ 353 (465)
T 3e9k_A 275 YKYLNAGAGGIAGAFIHEK-HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQAT 353 (465)
T ss_dssp SSTTCCCTTCCCEEEECGG-GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHC
T ss_pred ccccccCCCceEEEEEcHH-HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcC
Confidence 99994 8888999999653 22111111112211100 00000000001111111 23566778888887778
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC----------CCeEEecccc----ccceeeecccCccccccccchhhHHHHHHHhhhh
Q psy9807 386 LQEYIRKQISLAKEFEQLVRSD----------DRFEVIYEVL----MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVK 451 (561)
Q Consensus 386 ~~~~~~~~~~la~~l~~~l~~~----------~g~~l~~~~~----~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~ 451 (561)
++++.++..++++++.+.|++. ++++++.+.+ .++++|++
T Consensus 354 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~-------------------------- 407 (465)
T 3e9k_A 354 MKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITF-------------------------- 407 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEE--------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEe--------------------------
Confidence 9999999999999999999985 7888876542 44545433
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecC
Q psy9807 452 YLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCS 531 (561)
Q Consensus 452 ~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~ 531 (561)
.. + ..++.+.|.+.|.+.. ..+..++|+++++
T Consensus 408 -----------------------------------------~~-~--~~~l~~~L~~~Gi~v~----~~~~~~iRis~~~ 439 (465)
T 3e9k_A 408 -----------------------------------------SV-P--NKDVFQELEKRGVVCD----KRNPNGIRVAPVP 439 (465)
T ss_dssp -----------------------------------------CC-T--TCCHHHHHHTTTEECE----EETTTEEEEBCCT
T ss_pred -----------------------------------------cC-C--HHHHHHHHHHCCEEEe----cCCCCEEEEeCcc
Confidence 21 0 2357788888875542 2344689999867
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy9807 532 RYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 532 ~~t~~~di~~l~~~l~~~~~~ 552 (561)
.+++++||++++++|+++.++
T Consensus 440 ~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 440 LYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp TTCCHHHHHHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHHHHHHHh
Confidence 888999999999999988654
No 25
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.92 E-value=1.6e-23 Score=217.64 Aligned_cols=349 Identities=12% Similarity=0.065 Sum_probs=228.5
Q ss_pred ccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCC-ccccccCCCCCCeEEeCChhHHH
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLP-KEFLACSGGKGGGVIQGTASEAT 168 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~~~g~~t~ggT~an 168 (561)
..|+.+...++.++.+. +.+...+.. ..++...++.+++.+++++++|.+ ++ ..++|+|||+|+
T Consensus 20 ~~~l~~~~~~~~~~~v~-~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~~---------~v~~~~g~t~a~ 84 (386)
T 2dr1_A 20 KYKLFTAGPVACFPEVL-EIMKVQMFS-----HRSKEYRKVHMDTVERLREFLEVEKGE---------VLLVPSSGTGIM 84 (386)
T ss_dssp CSEECCSSSCCCCHHHH-HHTTSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCSSSE---------EEEESSCHHHHH
T ss_pred cceeecCCCcCCcHHHH-HHHhccccc-----ccCHHHHHHHHHHHHHHHHHhCCCCCc---------EEEEeCChHHHH
Confidence 45776655455555443 333333321 234556789999999999999997 22 478999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchh
Q psy9807 169 LVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDR 244 (561)
Q Consensus 169 l~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~ 244 (561)
..++.+..+. ++++++.... .+ +..++...|.+++.+|. .++.+|+++|+++|++ .
T Consensus 85 ~~~~~~l~~~-----------------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~- 144 (386)
T 2dr1_A 85 EASIRNGVSK-----------------GGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRK--N- 144 (386)
T ss_dssp HHHHHHHSCT-----------------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH--C-
T ss_pred HHHHHHhhcC-----------------CCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhc--C-
Confidence 8887764210 1244444444 44 67777888999999999 7788999999999964 2
Q ss_pred hcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccc
Q psy9807 245 EMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD 324 (561)
Q Consensus 245 ~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g 324 (561)
..+.+|+++..++.+|.+.|+++|+++|++||+++++|++|+.+....+ +... .+|+++.++||+++.|.|
T Consensus 145 ---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~di~~~s~sK~~~~~~g 215 (386)
T 2dr1_A 145 ---PDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIK-----FDKW-GLDVVFSSSQKAFGVPPG 215 (386)
T ss_dssp ---TTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEEEETTSTTCCCSS
T ss_pred ---CCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccc-----cccc-CCcEEEEeccccccCCCc
Confidence 1467888888899999999999999999999999999999986543211 1111 359999999999999988
Q ss_pred ceeEEecChhhHHHhhc--cCCCccccCCCCCCCCCC-cccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHHHHHHHHH
Q psy9807 325 CSAMWLKDPSWVVNAFN--VDPLYLKHDQQGSAPDYR-HWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRKQISLAKE 399 (561)
Q Consensus 325 ~g~l~~r~~~~l~~~~~--~~~~yl~~~~~~~~~~~~-~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~~~~la~~ 399 (561)
+|++++++. .+..... ....|+.... ...... ......+.. .....++.+++.+... +++++.++..+++++
T Consensus 216 ~G~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~ 292 (386)
T 2dr1_A 216 LAIGAFSER-FLEIAEKMPERGWYFDIPL--YVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKM 292 (386)
T ss_dssp CEEEEECHH-HHHHHTTCTTCCSTTCHHH--HHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred eEEEEECHH-HHHHHhcCCCCceEEeHHH--HHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 999998643 3322111 0111110000 000000 000011111 1233445566665555 688899999999999
Q ss_pred HHHHHhcCCCeEEeccc---cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCch
Q psy9807 400 FEQLVRSDDRFEVIYEV---LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR 476 (561)
Q Consensus 400 l~~~l~~~~g~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~ 476 (561)
+.+.|++. ++++..+. ..++++|
T Consensus 293 l~~~L~~~-g~~~~~~~~~~~~~~~~~----------------------------------------------------- 318 (386)
T 2dr1_A 293 VREGVREI-GLDILAEPGHESPTITAV----------------------------------------------------- 318 (386)
T ss_dssp HHHHHHHT-TCCBSSCTTCBCSSEEEE-----------------------------------------------------
T ss_pred HHHHHHHc-CCeeCcCccccCCceEEE-----------------------------------------------------
Confidence 99999998 88776542 1233333
Q ss_pred hhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 477 FEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 477 ~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
+++. +....++.++|.+.|.....+....+..++|+++.. .++++|++++++.|+++.+++..
T Consensus 319 --------------~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 319 --------------LTPP-GIKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMG-YMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp --------------ECCT-TCCHHHHHHHHHHTTEECEECCGGGTTTEEEEECCS-SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------EcCC-CCCHHHHHHHHHHCCeEEecCccccCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHcCC
Confidence 2221 111457888888886544333322234589999774 56889999999999998877643
No 26
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.92 E-value=1.1e-23 Score=219.44 Aligned_cols=352 Identities=9% Similarity=-0.003 Sum_probs=228.7
Q ss_pred CCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHH
Q psy9807 88 HSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 167 (561)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~a 167 (561)
..|+++.+.+++...+..+.+.+.... .. ..++...++..++.+++++++|.++. ...+||+|||+|
T Consensus 20 ~~~~~~~~~p~p~~~~~~v~~a~~~~~---~~--~~~~~~~~~~~~l~~~la~~~~~~~~--------~~v~~~~gg~~a 86 (393)
T 3kgw_A 20 SVPTRLLLGPGPSNLAPRVLAAGSLRM---IG--HMQKEMLQIMEEIKQGIQYVFQTRNP--------LTLVVSGSGHCA 86 (393)
T ss_dssp CCCCCEECSSSCCCCCHHHHHHTTCCC---CC--TTSHHHHHHHHHHHHHHHHHHTCCCS--------EEEEESCCTTTH
T ss_pred CCccceeccCCCCCCCHHHHHHhcccc---cC--cccHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEeCCcHHH
Confidence 346777777766555443333332211 11 23456677888999999999998753 136899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c--hHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhch
Q psy9807 168 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T--ELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSD 243 (561)
Q Consensus 168 nl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~--s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~ 243 (561)
+..++.+.... ++++++.... + .+...+...|.+++.+|. .++.+|+++|+++|++ .
T Consensus 87 l~~~~~~~~~~-----------------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~--~ 147 (393)
T 3kgw_A 87 METALFNLLEP-----------------GDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQ--H 147 (393)
T ss_dssp HHHHHHHHCCT-----------------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH--H
T ss_pred HHHHHHhcCCC-----------------CCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhh--C
Confidence 98777654210 2344444333 3 346667778999999999 7789999999999976 3
Q ss_pred hhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc
Q psy9807 244 REMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF 323 (561)
Q Consensus 244 ~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~ 323 (561)
.+.+|+++..++.+|.+.|+++|.++|++||+|+++|++|+.+....+ ... ..+|+++.++|||+++|.
T Consensus 148 -----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~-----~~~-~~~d~~~~s~sK~~~~~~ 216 (393)
T 3kgw_A 148 -----KPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIY-----MDQ-QGIDIMYSSSQKVLNAPP 216 (393)
T ss_dssp -----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCC-----TTT-TTCCEEEEESSSTTCCCS
T ss_pred -----CCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccc-----hhh-cCCCEEEecCcccccCCC
Confidence 466788888899999999999999999999999999999874322211 011 135999999999999999
Q ss_pred cceeEEecChhhHHHhhccCC----CccccCC----CCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHH
Q psy9807 324 DCSAMWLKDPSWVVNAFNVDP----LYLKHDQ----QGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQI 394 (561)
Q Consensus 324 g~g~l~~r~~~~l~~~~~~~~----~yl~~~~----~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~ 394 (561)
|+|++++++. .+........ .|+.... .+.. ...... ..+.. .....+..+++.+...+++++.++..
T Consensus 217 g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 293 (393)
T 3kgw_A 217 GISLISFNDK-AKYKVYSRKTKPVSFYTDITYLAKLWGCE-GETRVI-HHTTPVTSLYCLRESLALIAEQGLENCWRRHR 293 (393)
T ss_dssp SCEEEEECHH-HHHHHHTCSSCCSCSTTCHHHHHHHTTCS-SSCCCC-CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred ceeEEEECHH-HHHHHhccCCCCCceeecHHHHHHhhhhc-cccCCC-CCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 9999998553 3322211111 1110000 0000 000000 01111 12334456666667778899999999
Q ss_pred HHHHHHHHHHhcCCCeEEecccc---ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHh
Q psy9807 395 SLAKEFEQLVRSDDRFEVIYEVL---MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLV 471 (561)
Q Consensus 395 ~la~~l~~~l~~~~g~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l 471 (561)
++++++.+.|++. +++++.+.. .+.+
T Consensus 294 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~-------------------------------------------------- 322 (393)
T 3kgw_A 294 EATAHLHKHLQEM-GLKFFVKDPEIRLPTI-------------------------------------------------- 322 (393)
T ss_dssp HHHHHHHHHHHHT-TCCBSSSSGGGBCSSE--------------------------------------------------
T ss_pred HHHHHHHHHHHHc-CCeeccCChhhcCCeE--------------------------------------------------
Confidence 9999999999998 887763321 1111
Q ss_pred ccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC-CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 472 RSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN-GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 472 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
++|++.. .....++.+.|.++ |..+..+....+..++|++++++.++++|+++++++|+++.
T Consensus 323 ----------------~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l 385 (393)
T 3kgw_A 323 ----------------TTVTVPA-GYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREAL 385 (393)
T ss_dssp ----------------EEEECCT-TBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHH
T ss_pred ----------------EEEeCCC-CCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHH
Confidence 2222211 11134678888887 65443333223455899997666678999999999999887
Q ss_pred HHH
Q psy9807 551 EEL 553 (561)
Q Consensus 551 ~~~ 553 (561)
+++
T Consensus 386 ~~~ 388 (393)
T 3kgw_A 386 QHC 388 (393)
T ss_dssp HHS
T ss_pred Hhh
Confidence 654
No 27
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.92 E-value=1.3e-22 Score=213.73 Aligned_cols=285 Identities=11% Similarity=0.071 Sum_probs=188.6
Q ss_pred cccccCCCCCChHHHHHHHHHhhcc--cc-----ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCC
Q psy9807 91 KFHAYFPTANSYPAIVADILSDSIA--CI-----GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGT 163 (561)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n--~~-----~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~g 163 (561)
-|+++..+++.++.++..+ ...+. .. ...+..+....+...++.+++++++|.+++ ..+||+|
T Consensus 24 iyld~~~~~~~~~~v~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---------~v~~~~g 93 (423)
T 3lvm_A 24 IYLDYSATTPVDPRVAEKM-MQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR---------EIVFTSG 93 (423)
T ss_dssp EECBTTTCCCCCHHHHHHH-TTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG---------GEEEESS
T ss_pred EeecCCCcCCCCHHHHHHH-HHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC---------eEEEeCC
Confidence 4777776666666555433 33332 11 112334445567888999999999999764 5799999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHH---HhccCCeEEeeC-CCCccChhhHHHHH
Q psy9807 164 ASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVM---LDWLGKMLDLPK-EFLACSGGKGGGVI 238 (561)
Q Consensus 164 gT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa---~~~g~~v~~v~~-~~g~~d~~~Le~~i 238 (561)
||+|+..++.+.++...+. ++.+++.... .+...++ ...|.+++.+|. .++.+|+++|+++|
T Consensus 94 gt~a~~~a~~~l~~~~~~~-------------gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 160 (423)
T 3lvm_A 94 ATESDNLAIKGAANFYQKK-------------GKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAM 160 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTT-------------CCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhhccC-------------CCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhc
Confidence 9999999988766532110 1244444444 5555555 345889999999 88899999999999
Q ss_pred hhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcc
Q psy9807 239 QRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKW 318 (561)
Q Consensus 239 ~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~ 318 (561)
.+ .+.+|+++...+.+|.+.|+++|+++|++||+++++|+||+++....+ .... .+|+++.++||+
T Consensus 161 ~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~~~s~sK~ 226 (423)
T 3lvm_A 161 RD--------DTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPID-----LSQL-KVDLMSFSGHKI 226 (423)
T ss_dssp CT--------TEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-----TTTS-CCSEEEEESTTT
T ss_pred CC--------CcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcC-----hhhc-CCCEEEechHHh
Confidence 77 578889999999999999999999999999999999999986543211 1111 359999999995
Q ss_pred ccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy9807 319 MLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLA 397 (561)
Q Consensus 319 l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la 397 (561)
++|.|+|++++++.... . + ..+..... ...... ..+.. .....+..+++.+.. .++++.++..+++
T Consensus 227 -~g~~g~G~~~~~~~~~~-~-~---~~~~~~~~--~~~~~~----~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~ 293 (423)
T 3lvm_A 227 -YGPKGIGALYVRRKPRV-R-I---EAQMHGGG--HERGMR----SGTLPVHQIVGMGEAYRIAKE-EMATEMERLRGLR 293 (423)
T ss_dssp -TSCSSCEEEEECBTTBC-C-C---CCSSCSSC--TTTTTC----CSCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred -cCCCCeEEEEEeccccC-C-C---CccccCCc--cccccc----CCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 55778999998753211 0 1 11111000 000000 01111 112233344444333 3788999999999
Q ss_pred HHHHHHHhcCCCeEEecccc---ccceeeec
Q psy9807 398 KEFEQLVRSDDRFEVIYEVL---MGLVCFRL 425 (561)
Q Consensus 398 ~~l~~~l~~~~g~~l~~~~~---~~~v~f~~ 425 (561)
+++.+.|+++|+++++.++. .+.++|.+
T Consensus 294 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 324 (423)
T 3lvm_A 294 NRLWNGIKDIEEVYLNGDLEHGAPNILNVSF 324 (423)
T ss_dssp HHHHHHHTTSTTEEEESCSTTBCTTEEEEEE
T ss_pred HHHHHHHhcCCCEEEeCCccccCCCeEEEEe
Confidence 99999999999999886543 24444433
No 28
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.92 E-value=3.2e-23 Score=215.11 Aligned_cols=318 Identities=14% Similarity=0.057 Sum_probs=215.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
.++...++.+++.+++++++|.+... ...++|+|||+|+. ++.+... + ++++++.
T Consensus 29 ~~~~~~~~~~~~~~~la~~~~~~~~~-------~~v~~~~g~t~al~-~~~~~~~----------~-------gd~vi~~ 83 (384)
T 3zrp_A 29 TSKEFVEALAYSLKGLRYVMGASKNY-------QPLIIPGGGTSAME-SVTSLLK----------P-------NDKILVV 83 (384)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCTTS-------EEEEEESCHHHHHH-HGGGGCC----------T-------TCEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCCC-------cEEEEcCCcHHHHH-HHHhhcC----------C-------CCEEEEe
Confidence 35666788899999999999997510 15799999999998 6654210 0 2234444
Q ss_pred ccc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 203 PAC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 203 ~s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
... ++ +...+...|.+++.+|. .++.+|+++|+++|.+ . .+.+|+++..++.+|.+.|+++|.++|++|
T Consensus 84 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~ 156 (384)
T 3zrp_A 84 SNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRK--S-----EYKLVALTHVETSTGVREPVKDVINKIRKY 156 (384)
T ss_dssp CSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHH--S-----CEEEEEEESEETTTTEECCHHHHHHHHGGG
T ss_pred cCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHh--C-----CCcEEEEeCCCCCCceECcHHHHHHHHHhc
Confidence 333 33 44555677899999999 7889999999999976 3 477889999999999999999999999999
Q ss_pred CceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHh-h--ccCCCccccCCCCCC
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNA-F--NVDPLYLKHDQQGSA 355 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~-~--~~~~~yl~~~~~~~~ 355 (561)
|+++++|++|+.+....+ ... ..+|++++++|||+++|.|+|++++++. .+... . .....|...... .
T Consensus 157 ~~~li~D~a~~~~~~~~~-----~~~-~~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~ 227 (384)
T 3zrp_A 157 VELIVVDGVSSVGAEEVK-----AEE-WNVDVYLTASQKALGSAAGLGLLLLSPK-ALSILDSQNSIAGYYLDLRNW--L 227 (384)
T ss_dssp EEEEEEECTTTTTTSCCC-----TTT-TTCSEEEEETTSTTCCCSSEEEEEECHH-HHHHHHHCCCSCCSTTCHHHH--H
T ss_pred CCEEEEECcccccCcccc-----ccc-cCCCEEEecCcccccCCCceEEEEECHH-HHHHhcCCCCCCcccccHHHH--H
Confidence 999999999985433211 111 1359999999999999999999998654 33222 0 111111100000 0
Q ss_pred CCCCc----cccc-CcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc----cccceeeec
Q psy9807 356 PDYRH----WQIP-LGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV----LMGLVCFRL 425 (561)
Q Consensus 356 ~~~~~----~~~~-~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~----~~~~v~f~~ 425 (561)
..... .... ++.. .....++.+++.+...+++++.++..++++++.+.|++. +++++.++ ...+++
T Consensus 228 ~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--- 303 (384)
T 3zrp_A 228 PVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTG--- 303 (384)
T ss_dssp HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEE---
T ss_pred HHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEE---
Confidence 00000 0000 0111 123445567777777778999999999999999999998 88776544 123323
Q ss_pred ccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHH
Q psy9807 426 KHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKR 505 (561)
Q Consensus 426 ~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~ 505 (561)
|++.+. ...++.+.
T Consensus 304 ----------------------------------------------------------------~~~~~~--~~~~~~~~ 317 (384)
T 3zrp_A 304 ----------------------------------------------------------------VILKVA--DPQKVLAG 317 (384)
T ss_dssp ----------------------------------------------------------------EECSSS--CHHHHHHH
T ss_pred ----------------------------------------------------------------EECCCC--CHHHHHHH
Confidence 333221 13578888
Q ss_pred HHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 506 INGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 506 L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
|.+.|.....+..... .++|+++.. .++++|+++++++|+++.+++
T Consensus 318 l~~~gi~v~~g~~~~~-~~iRi~~~~-~~~~e~i~~~~~~l~~~l~~~ 363 (384)
T 3zrp_A 318 TVNEGVEFAPGVHPAF-KYFRIGHMG-WVTPNDAIIAISVIERTLRKL 363 (384)
T ss_dssp HHTTTCCCEECCCTTC-CEEEEECCS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCEEEecCCCCCc-CEEEEeccc-cCCHHHHHHHHHHHHHHHHHc
Confidence 8888755433221111 689999775 468899999999999987764
No 29
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.92 E-value=2.2e-22 Score=210.37 Aligned_cols=353 Identities=10% Similarity=0.012 Sum_probs=224.0
Q ss_pred cccccCCCCCChHHHHHHHHHhhcc-----ccccccccChhhHHHHHHHHHHHHHhcCC-CccccccCCCCCCeEEeCCh
Q psy9807 91 KFHAYFPTANSYPAIVADILSDSIA-----CIGFTWIASPACTELEVVMLDWLGKMLDL-PKEFLACSGGKGGGVIQGTA 164 (561)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n-----~~~~~~~~sp~~~~lE~~~~~~la~l~g~-~~~~~~~~~~~~~g~~t~gg 164 (561)
.||++...++.++.++. .+...+. .+...+..+........++.+++++++|. +++ ..+||+||
T Consensus 25 i~l~~~~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~---------~v~~~~g~ 94 (406)
T 1kmj_A 25 AYLDSAASAQKPSQVID-AEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAE---------ELVFVRGT 94 (406)
T ss_dssp EECCTTTCCCCCHHHHH-HHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGG---------GEEEESSH
T ss_pred EEecCCccCCCCHHHHH-HHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCC---------eEEEeCCh
Confidence 46776655555555443 3333322 22222222223456677888899999998 333 57999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch----HHHHHHhccCCeEEeeC-CCCccChhhHHHHH
Q psy9807 165 SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE----LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVI 238 (561)
Q Consensus 165 T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s----~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i 238 (561)
|+|+..++.+++.... .+ ++++++.... .+ +...+...|.+++.+|. .++.+|+++|+++|
T Consensus 95 t~a~~~~~~~~~~~~~------~~-------gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l 161 (406)
T 1kmj_A 95 TEGINLVANSWGNSNV------RA-------GDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLF 161 (406)
T ss_dssp HHHHHHHHHHTHHHHC------CT-------TCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHC
T ss_pred hHHHHHHHHHhhhhcC------CC-------CCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHh
Confidence 9999988887653211 00 2244444443 22 34445667889999999 78889999999999
Q ss_pred hhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcc
Q psy9807 239 QRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKW 318 (561)
Q Consensus 239 ~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~ 318 (561)
.+ .+.+|+++..++.+|.+.|+++|+++|++||+++++|++|+.+....+ . ... .+|+++.++||+
T Consensus 162 ~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~-~----~~~-~~d~~~~s~~K~ 227 (406)
T 1kmj_A 162 DE--------KTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD-V----QAL-DCDFYVFSGHKL 227 (406)
T ss_dssp CT--------TEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-H----HHH-TCSEEEEEGGGT
T ss_pred cc--------CCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCc-c----ccc-CCCEEEEEchhc
Confidence 76 577889999999999999999999999999999999999986433111 1 111 359999999998
Q ss_pred ccccccceeEEecChhhHHHhhccCCC--ccccCCCCCCCCC--Cccccc-CcCCc-chHHHHHHHHHhhHHHHHHHHHH
Q psy9807 319 MLVTFDCSAMWLKDPSWVVNAFNVDPL--YLKHDQQGSAPDY--RHWQIP-LGRRF-RSLKLWFVLRLLGVKYLQEYIRK 392 (561)
Q Consensus 319 l~~P~g~g~l~~r~~~~l~~~~~~~~~--yl~~~~~~~~~~~--~~~~~~-~sr~~-~al~lw~~l~~~g~~g~~~~~~~ 392 (561)
+ +|.|+|+++++ +............ |...........+ ...... ++... ....+..+++.+...+++++.++
T Consensus 228 ~-g~~G~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 305 (406)
T 1kmj_A 228 Y-GPTGIGILYVK-EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEY 305 (406)
T ss_dssp T-SCTTCEEEEEC-HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred c-CCCCcEEEEEe-HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 8 57779999985 3333221111100 0000000000000 000011 11111 12233355566665678888999
Q ss_pred HHHHHHHHHHHHhcCCCeEEeccc-cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHh
Q psy9807 393 QISLAKEFEQLVRSDDRFEVIYEV-LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLV 471 (561)
Q Consensus 393 ~~~la~~l~~~l~~~~g~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l 471 (561)
..++++++.+.|++.|+++++.+. ..++++|++.
T Consensus 306 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------- 340 (406)
T 1kmj_A 306 EQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLG--------------------------------------------- 340 (406)
T ss_dssp HHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEET---------------------------------------------
T ss_pred HHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEEC---------------------------------------------
Confidence 999999999999999899887653 4556555332
Q ss_pred ccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeee--------ECCEEEEEEEecCCCCCHHHHHHHH
Q psy9807 472 RSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSK--------IRDVYFLRMAVCSRYSESSDMIYSW 543 (561)
Q Consensus 472 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~--------~~g~~~lR~~~~~~~t~~~di~~l~ 543 (561)
+.+ ..++.+.|.+.|.....+.. .....++|+++. ..++++|+++++
T Consensus 341 ----------------------~~~--~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~-~~~t~~~i~~~~ 395 (406)
T 1kmj_A 341 ----------------------KHH--AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLV 395 (406)
T ss_dssp ----------------------TCC--HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECC-TTCCHHHHHHHH
T ss_pred ----------------------CCC--HHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEee-cCCCHHHHHHHH
Confidence 111 23567777777754433221 112468999977 466889999999
Q ss_pred HHHHHHHHH
Q psy9807 544 NEIKTLTEE 552 (561)
Q Consensus 544 ~~l~~~~~~ 552 (561)
++|+++.+.
T Consensus 396 ~~l~~~~~~ 404 (406)
T 1kmj_A 396 TGLQRIHRL 404 (406)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988764
No 30
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.92 E-value=6.4e-23 Score=213.92 Aligned_cols=349 Identities=10% Similarity=-0.004 Sum_probs=221.6
Q ss_pred ccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHH
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATL 169 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl 169 (561)
|+.+.+.+++...+..+.+.+...+.. .+ +|.......++.+++++++|.+++ ...++|+|||+|+.
T Consensus 18 ~~~~~~~~g~~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~g~~~~--------~~i~~~~g~t~a~~ 84 (393)
T 2huf_A 18 PNKLLMGPGPSNAPQRVLDAMSRPILG---HL--HPETLKIMDDIKEGVRYLFQTNNI--------ATFCLSASGHGGME 84 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCS--------EEEEESSCHHHHHH
T ss_pred CCeEEecCCCCCCCHHHHHHHHhhhcc---CC--CHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEcCcHHHHHH
Confidence 444444444433333333443333322 12 455677888999999999998642 14689999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhh
Q psy9807 170 VALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDRE 245 (561)
Q Consensus 170 ~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~ 245 (561)
.++.+... + ++++++.... .+ +.+.+...|.+++.+|. .++.+|+++|+++|++ .
T Consensus 85 ~~~~~~~~----------~-------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~-- 143 (393)
T 2huf_A 85 ATLCNLLE----------D-------GDVILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLI--H-- 143 (393)
T ss_dssp HHHHHHCC----------T-------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH--H--
T ss_pred HHHHHHhC----------C-------CCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhc--c--
Confidence 88776421 0 1245554444 33 33344557889999998 7788999999999965 2
Q ss_pred cCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccc
Q psy9807 246 MCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDC 325 (561)
Q Consensus 246 ~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~ 325 (561)
.+.+|+++..++.+|.+.|+++|+++|++||+++++|++|+.+....+ +... .+|+++.++|||+++|.|+
T Consensus 144 ---~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~sK~l~g~~G~ 214 (393)
T 2huf_A 144 ---KPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMF-----MDRW-EIDAMYTGSQKVLGAPPGI 214 (393)
T ss_dssp ---CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEECCSSSTTCCCSSC
T ss_pred ---CCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcc-----hhhc-CccEEEECCCcccccCCCe
Confidence 356788889999999999999999999999999999999875432111 1111 3599999999999999999
Q ss_pred eeEEecChhhHHHhhcc---CCCccccCC-----CCCCCCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy9807 326 SAMWLKDPSWVVNAFNV---DPLYLKHDQ-----QGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISL 396 (561)
Q Consensus 326 g~l~~r~~~~l~~~~~~---~~~yl~~~~-----~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~l 396 (561)
|+++++ +......... ..+|..... .+. .....+. .++... ....+..+++.+...+++++.++..++
T Consensus 215 G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 291 (393)
T 2huf_A 215 TPVSFS-HRAVERYKRRNTKVKVYYWDMSLVGDYWGC-FGRPRIY-HHTISSTLLYGLREAIAMACEEGLPALIARHEDC 291 (393)
T ss_dssp EEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTC-SSSCCCC-SCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred EEEEEC-HHHHHHHhhcCCCCceEEEchHHHHhhhcc-ccccCCC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 999985 4333322211 122221100 000 0000000 011111 123334456665556788899999999
Q ss_pred HHHHHHHHhcCCCeEEecccc--cc-ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcc
Q psy9807 397 AKEFEQLVRSDDRFEVIYEVL--MG-LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS 473 (561)
Q Consensus 397 a~~l~~~l~~~~g~~l~~~~~--~~-~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~ 473 (561)
++++.+.|++. +++++.++. .+ +++|++..
T Consensus 292 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~---------------------------------------------- 324 (393)
T 2huf_A 292 AKRLYRGLQDA-GFELYADPKDRLSTVTTIKVPQ---------------------------------------------- 324 (393)
T ss_dssp HHHHHHHHHHT-TCCBSSCGGGBCTTEEEEECCT----------------------------------------------
T ss_pred HHHHHHHHHHc-CCeeccCccccCCcEEEEEcCC----------------------------------------------
Confidence 99999999988 887765431 22 33333210
Q ss_pred CchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC-CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 474 DDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN-GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 474 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+.+ ..++.++|.++ |.....+....+..++|++++++.++++|+++++++|+++.++
T Consensus 325 --------------------~~~--~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 325 --------------------GVD--WLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp --------------------TCC--HHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred --------------------CCC--HHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHH
Confidence 111 34677788765 6443222222234689999866677899999999999988776
Q ss_pred H
Q psy9807 553 L 553 (561)
Q Consensus 553 ~ 553 (561)
+
T Consensus 383 ~ 383 (393)
T 2huf_A 383 V 383 (393)
T ss_dssp H
T ss_pred c
Confidence 5
No 31
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.91 E-value=8.5e-24 Score=218.48 Aligned_cols=342 Identities=11% Similarity=-0.018 Sum_probs=221.8
Q ss_pred cccCCCCCChHHHHHHHHHhhcc---ccccc---cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE-eCChh
Q psy9807 93 HAYFPTANSYPAIVADILSDSIA---CIGFT---WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI-QGTAS 165 (561)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~n---~~~~~---~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~-t~ggT 165 (561)
|+...+.+.++.++..+.....| ++... ...++.+.++.+++++.+++++|.++. ...+| |+|||
T Consensus 16 ~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~--------~evif~t~~~T 87 (377)
T 3e77_A 16 ENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDN--------YKVIFLQGGGC 87 (377)
T ss_dssp CCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTT--------EEEEEESSHHH
T ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC--------CeEEEEcCchH
Confidence 55555677778877766655432 22222 345788899999999999999999753 15688 58999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhh
Q psy9807 166 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRK 241 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~ 241 (561)
+++..++...... .+ ++++++.... ..+.+.++..|..++.+|. .++..+++.++..+.+
T Consensus 88 ~a~n~a~~~l~~~--------~~-------Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~- 151 (377)
T 3e77_A 88 GQFSAVPLNLIGL--------KA-------GRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNP- 151 (377)
T ss_dssp HHHHHHHHHHGGG--------ST-------TCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCT-
T ss_pred HHHHHHHHhccCC--------CC-------CCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccCC-
Confidence 9987766543110 00 1234333333 3333444445666677777 5667888887766655
Q ss_pred chhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccc
Q psy9807 242 SDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV 321 (561)
Q Consensus 242 ~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~ 321 (561)
.+.+|+.++.+|.+|.+.|+ +|+++|+++|||++++.+....+ ++.+ |.+++++|||++
T Consensus 152 -------~t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id-----~~~~---~~~~~s~~K~~g- 210 (377)
T 3e77_A 152 -------DASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVD-----VSKF---GVIFAGAQKNVG- 210 (377)
T ss_dssp -------TCSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCC-----GGGC---SEEEEEGGGTTS-
T ss_pred -------CccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCc-----hhhc---CEEEEecccccC-
Confidence 46678899999999999999 58899999999999987655443 1222 678999999995
Q ss_pred cccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHHHHHHHHH
Q psy9807 322 TFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRKQISLAKE 399 (561)
Q Consensus 322 P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~~~~la~~ 399 (561)
|.|+|++++|+... ...-...+.|+..... .......++.. +....+-.+++++-.. |++++.++..+++++
T Consensus 211 p~G~g~l~~~~~~l-~~~~~~~p~~~~~~~~-----~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~ 284 (377)
T 3e77_A 211 SAGVTVVIVRDDLL-GFALRECPSVLEYKVQ-----AGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQT 284 (377)
T ss_dssp CTTCEEEEEETTSC-SCCCTTSCGGGCHHHH-----HTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCccEEEEEcHHHH-hhccCCCCchhhHHHH-----hhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 99999999987532 1111111223210000 00000011111 2345566778888777 899999999999999
Q ss_pred HHHHHhcCCCeEEec-cc--ccc-ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCc
Q psy9807 400 FEQLVRSDDRFEVIY-EV--LMG-LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD 475 (561)
Q Consensus 400 l~~~l~~~~g~~l~~-~~--~~~-~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~ 475 (561)
+.+.|+++||+++.. ++ ..+ +++|++.+..
T Consensus 285 l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~---------------------------------------------- 318 (377)
T 3e77_A 285 IYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAK---------------------------------------------- 318 (377)
T ss_dssp HHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTT----------------------------------------------
T ss_pred HHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCC----------------------------------------------
Confidence 999999999988643 11 222 3555443211
Q ss_pred hhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 476 RFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 476 ~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+..++...+.+.+.+.|.+...+. +..+.+|+|+.+ ++|++||++++++|+++.++
T Consensus 319 ------------------~~~~~~~~~l~~l~~~Gi~~~~g~--~~~g~iRiS~~~-~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 319 ------------------GDDALEKRFLDKALELNMLSLKGH--RSVGGIRASLYN-AVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp ------------------CCHHHHHHHHHHHHHTTEESCBCC--TTTCSEEEECCT-TSCHHHHHHHHHHHHHHHHH
T ss_pred ------------------CchhHHHHHHHHHHHCCcEEeCCC--CcCCEEEEECCC-CCCHHHHHHHHHHHHHHHHH
Confidence 012333466777777775543322 223469999875 66889999999999987654
No 32
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.91 E-value=3.6e-23 Score=211.98 Aligned_cols=316 Identities=11% Similarity=0.030 Sum_probs=210.6
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
.+|...+.+.++.+++++++|.+.. ....++|+|||+|+..++.+... +++++.
T Consensus 27 ~~~~~~~~~~~l~~~la~~~g~~~~-------~~~v~~t~g~t~a~~~~~~~~~~-------------------d~vl~~ 80 (353)
T 2yrr_A 27 LDPEVLRVNRAIQERLAALFDPGEG-------ALVAALAGSGSLGMEAGLANLDR-------------------GPVLVL 80 (353)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCCCTT-------CEEEEESSCHHHHHHHHHHTCSC-------------------CCEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCC-------CceEEEcCCcHHHHHHHHHHhcC-------------------CcEEEE
Confidence 4566778899999999999998611 02578999999999877655321 245554
Q ss_pred ccc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 203 PAC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 203 ~s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
... ++ +.+++...|.+++.+|. .++.+|+++|++++++ . ++.+|+.+..++.||.+.|+++|.++|++|
T Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~-----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~ 153 (353)
T 2yrr_A 81 VNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKR--R-----RYRMVALVHGETSTGVLNPAEAIGALAKEA 153 (353)
T ss_dssp ECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHH--S-----CCSEEEEESEETTTTEECCHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHh--C-----CCCEEEEEccCCCcceecCHHHHHHHHHHc
Confidence 433 43 45566778899999999 7788999999999976 2 456788899999999999999999999999
Q ss_pred CceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCC-CccccCCCCCCCC
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDP-LYLKHDQQGSAPD 357 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~-~yl~~~~~~~~~~ 357 (561)
|+|+|+|++|+.+....+ +... .+|++++++|||+++|.|+|++++++. .+.. +...+ .|+..........
T Consensus 154 ~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~-l~~~~~~~~~~~~~~~~~~ 225 (353)
T 2yrr_A 154 GALFFLDAVTTLGMLPFS-----MRAM-GVDYAFTGSQKCLSAPPGLAPIAASLE-ARKA-FTGKRGWYLDLARVAEHWE 225 (353)
T ss_dssp TCEEEEECTTTTTTSCCC-----HHHH-TCSEEECCTTSTTCCCSSCEEEEECHH-HHHH-CCCCSCSTTCHHHHHHHHT
T ss_pred CCeEEEEcCccccccccc-----cccc-CceEEEecCcccccCCCceEEEEECHH-HHHH-hccCCCccccHHHHhhhhh
Confidence 999999999974322111 1111 359999999999999999999998654 3322 22111 1110000000000
Q ss_pred CCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc--cccceeeecccCcccccc
Q psy9807 358 YRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV--LMGLVCFRLKHWQIPLGR 434 (561)
Q Consensus 358 ~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~--~~~~v~f~~~~~~~~~~~ 434 (561)
.....++.. .....++.+++.+...+++++.++..++++++.+.|++. +++++.++ ...+++|++.+
T Consensus 226 --~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~------- 295 (353)
T 2yrr_A 226 --RGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPE------- 295 (353)
T ss_dssp --TCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCT-------
T ss_pred --cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCC-------
Confidence 000011111 122344566676666678899999999999999999998 88887543 22333343210
Q ss_pred ccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEE
Q psy9807 435 RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHL 514 (561)
Q Consensus 435 ~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~ 514 (561)
+.+ ..++.+.|.+.|....
T Consensus 296 -----------------------------------------------------------~~~--~~~~~~~l~~~gi~v~ 314 (353)
T 2yrr_A 296 -----------------------------------------------------------GVD--ADRLVRALYAEGVAVA 314 (353)
T ss_dssp -----------------------------------------------------------TCC--HHHHHHHHHHTTEECE
T ss_pred -----------------------------------------------------------CCC--HHHHHHHHHHCCEEEe
Confidence 111 3467888888875443
Q ss_pred EeeeECCEEEEEEEecCCCCCHHHHH-HHHHHHHHHHH
Q psy9807 515 VPSKIRDVYFLRMAVCSRYSESSDMI-YSWNEIKTLTE 551 (561)
Q Consensus 515 ~~~~~~g~~~lR~~~~~~~t~~~di~-~l~~~l~~~~~ 551 (561)
.+....+..++|++++... +++|++ +++++|+++.+
T Consensus 315 ~g~~~~~~~~iRi~~~~~~-~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 315 GGIGPTRGQVLRLGLMGEG-ARREAYQAFLKALDRALA 351 (353)
T ss_dssp ECCGGGTTTCEEEECSGGG-SCHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCeEEEecCccC-CHHHHHHHHHHHHHHHHh
Confidence 3332223457999976555 555788 99999987754
No 33
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.91 E-value=7.7e-23 Score=209.77 Aligned_cols=313 Identities=10% Similarity=-0.005 Sum_probs=206.6
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
.++.......++.+++++++|.+++ ..++|+|||+|+..++.+.... ++++++.
T Consensus 28 ~~~~~~~~~~~l~~~la~~~g~~~~---------~i~~~~g~t~a~~~~~~~~~~~-----------------gd~vl~~ 81 (352)
T 1iug_A 28 RTEAAREVFLKARGLLREAFRTEGE---------VLILTGSGTLAMEALVKNLFAP-----------------GERVLVP 81 (352)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCSSE---------EEEEESCHHHHHHHHHHHHCCT-----------------TCEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCc---------eEEEcCchHHHHHHHHHhccCC-----------------CCeEEEE
Confidence 4566677788899999999998753 5799999999998887764210 1245554
Q ss_pred ccc-chH--HHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 203 PAC-TEL--EVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 203 ~s~-~s~--~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
... ++. .+.+...|.+++.+|. .++.+|+++|++ + .+.+|+.+..++.||.+.|+++|.++|++|
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~ 150 (352)
T 1iug_A 82 VYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK---E--------GYAGLLLVHSETSTGALADLPALARAFKEK 150 (352)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC---S--------SCSEEEEESEETTTTEECCHHHHHHHHHHH
T ss_pred eCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc---c--------CCcEEEEEEecCCcceecCHHHHHHHHHhh
Confidence 444 443 3444557889999999 778899998876 3 456788899999999999999999999999
Q ss_pred --CceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCC
Q psy9807 279 --DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAP 356 (561)
Q Consensus 279 --~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (561)
|+|+|+|++|+.+....+ +... .+|+++.++|||+++|.|+|++++++. .+.. +.....|+..... ..
T Consensus 151 ~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~-~~~~~~~~~~~~~--~~ 220 (352)
T 1iug_A 151 NPEGLVGADMVTSLLVGEVA-----LEAM-GVDAAASGSQKGLMCPPGLGFVALSPR-ALER-LKPRGYYLDLARE--LK 220 (352)
T ss_dssp CTTCEEEEECTTTBTTBCCC-----SGGG-TCSEEEEESSSTTCCCSCEEEEEECHH-HHHT-CCCCSSTTCHHHH--HH
T ss_pred CCCCEEEEECCccccCccee-----cccc-CeeEEEecCcccccCCCceeEEEECHH-HHHH-hhCCCceeeHHHH--Hh
Confidence 999999999974432211 1111 359999999999999999999998553 2221 1110011000000 00
Q ss_pred CCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc-cccceeeecccCcccccc
Q psy9807 357 DYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV-LMGLVCFRLKHWQIPLGR 434 (561)
Q Consensus 357 ~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~-~~~~v~f~~~~~~~~~~~ 434 (561)
........++... ....+..+++.+... ++++.++..++++++.+.|++. ++++..+. ..+++.|++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------- 291 (352)
T 1iug_A 221 AQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPE------- 291 (352)
T ss_dssp HHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCT-------
T ss_pred hcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCC-------
Confidence 0000000011111 122334455554443 7888899999999999999998 88876553 34454443321
Q ss_pred ccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEE
Q psy9807 435 RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHL 514 (561)
Q Consensus 435 ~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~ 514 (561)
+.+ ..++.++|.+.|....
T Consensus 292 -----------------------------------------------------------~~~--~~~~~~~l~~~gi~v~ 310 (352)
T 1iug_A 292 -----------------------------------------------------------GVP--YARVKEAFAQRGAVIA 310 (352)
T ss_dssp -----------------------------------------------------------TCC--HHHHHHHHHTTTEECE
T ss_pred -----------------------------------------------------------CCC--HHHHHHHHHHCCEEEE
Confidence 111 3468888888875443
Q ss_pred EeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 515 VPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 515 ~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.+....+..++|+++.. .++++|+++++++|+++.+++
T Consensus 311 ~~~~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 311 GGQGPLKGKVFRLSLMG-AYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp ECCGGGTTTEEEECCCS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred eCCCccCCCEEEEEccc-cCCHHHHHHHHHHHHHHHHHh
Confidence 33322234689999764 568889999999999887765
No 34
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.91 E-value=3.7e-23 Score=216.23 Aligned_cols=289 Identities=11% Similarity=0.005 Sum_probs=187.1
Q ss_pred CCccccccCCCCCChHHHHHHHHHhh---ccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCCh
Q psy9807 88 HSPKFHAYFPTANSYPAIVADILSDS---IACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTA 164 (561)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~~~~~l~~~---~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~gg 164 (561)
.+.-|+++..+++.++.++..+.... +.+....+..+....++.+++.+++++++|.+++ ..++|+||
T Consensus 19 ~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---------~v~~~~g~ 89 (400)
T 3vax_A 19 SHMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD---------ELIFTSGA 89 (400)
T ss_dssp ---CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG---------GEEEESCH
T ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC---------cEEEeCCH
Confidence 45568887766666666544333222 2111123444555677888999999999999764 57999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-ceEEeccc-chHHHHHH---hccCCeEEeeC-CCCccChhhHHHHH
Q psy9807 165 SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA-NLIASPAC-TELEVVML---DWLGKMLDLPK-EFLACSGGKGGGVI 238 (561)
Q Consensus 165 T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~-~~vv~~s~-~s~~kaa~---~~g~~v~~v~~-~~g~~d~~~Le~~i 238 (561)
|+|+..++.+........ ++ .+++.... .++..++. ..|.+++.+|. .++.+|+++|+++|
T Consensus 90 t~al~~~~~~l~~~~~~~-------------gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 156 (400)
T 3vax_A 90 TESNNIALLGLAPYGERT-------------GRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERL 156 (400)
T ss_dssp HHHHHHHHHTTHHHHHHH-------------TCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhccC-------------CCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhc
Confidence 999988887765322111 22 34444333 45544443 35789999999 88999999999999
Q ss_pred hhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcc
Q psy9807 239 QRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKW 318 (561)
Q Consensus 239 ~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~ 318 (561)
.+ .+.+|+++..++.+|.+.|+++|.++|++||+++++|++|+.+....+ +... +|+++.++||
T Consensus 157 ~~--------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-----~~~~--~d~~~~s~~K- 220 (400)
T 3vax_A 157 RP--------DTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGD-----LTTP--IDMISISGHK- 220 (400)
T ss_dssp CT--------TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGG-----GGSC--CSEEEEETGG-
T ss_pred CC--------CceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcC-----hhhc--CcEEEEeHHH-
Confidence 76 578899999999999999999999999999999999999985432111 1222 6999999999
Q ss_pred ccccccceeEE-ecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHhhHHHHHHHHHHHH
Q psy9807 319 MLVTFDCSAMW-LKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLLGVKYLQEYIRKQI 394 (561)
Q Consensus 319 l~~P~g~g~l~-~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~g~~g~~~~~~~~~ 394 (561)
+++|.|+|+++ ++++......... ..++... .. ..... ........++ .+++.+ .++++++.++..
T Consensus 221 ~~g~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~---~~----~~~~~-~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~ 290 (400)
T 3vax_A 221 IGAPKGVGALVTRRREEMDDERVPL-EPIMFGG---GQ----ERKLR-PGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQ 290 (400)
T ss_dssp GTSCSSCEEEEECBCSSSTTCBCCC-CCSSCSS---CT----GGGTS-CSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHH
T ss_pred hCCCCceEEEEEecchhcccccccc-CceecCC---Cc----eeeee-cCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 55688999999 8774222100000 1111100 00 00000 0011222222 333322 346788999999
Q ss_pred HHHHHHHHHHhcCCCeEEecccc---ccceeeec
Q psy9807 395 SLAKEFEQLVRSDDRFEVIYEVL---MGLVCFRL 425 (561)
Q Consensus 395 ~la~~l~~~l~~~~g~~l~~~~~---~~~v~f~~ 425 (561)
++++++.+.|+ .+++++..++. .+++.|++
T Consensus 291 ~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~ 323 (400)
T 3vax_A 291 DLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSF 323 (400)
T ss_dssp HHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEEC
T ss_pred HHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEe
Confidence 99999999999 88999876543 24555543
No 35
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.91 E-value=4.3e-22 Score=209.28 Aligned_cols=352 Identities=11% Similarity=0.006 Sum_probs=224.4
Q ss_pred cccccCCCCCChHHHHHHHHHhhccc-----cccccccChhhHHHHHHHHHHHHHhcCC-CccccccCCCCCCeEEeCCh
Q psy9807 91 KFHAYFPTANSYPAIVADILSDSIAC-----IGFTWIASPACTELEVVMLDWLGKMLDL-PKEFLACSGGKGGGVIQGTA 164 (561)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n~-----~~~~~~~sp~~~~lE~~~~~~la~l~g~-~~~~~~~~~~~~~g~~t~gg 164 (561)
.||++...++.++.+.. .+...+.. +...+..++.......++.+++++++|. +++ ..++|+||
T Consensus 30 i~l~~~~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~---------~v~~~~g~ 99 (420)
T 1t3i_A 30 VYLDNAATSQKPRAVLE-KLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPR---------EIVYTRNA 99 (420)
T ss_dssp EECBTTTCCCCCHHHHH-HHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGG---------GEEEESSH
T ss_pred EEecCCccCCCCHHHHH-HHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCC---------eEEEcCCh
Confidence 46666554444455443 33333322 1112223333456677888899999998 433 57999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch----HHHHHHhccCCeEEeeC-CCCccChhhHHHHH
Q psy9807 165 SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE----LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVI 238 (561)
Q Consensus 165 T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s----~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i 238 (561)
|+|+..++.+++.... .+ ++++++.... .+ +...+...|.+++.+|. +++.+|+++|+++|
T Consensus 100 t~a~~~~~~~~~~~~~------~~-------gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l 166 (420)
T 1t3i_A 100 TEAINLVAYSWGMNNL------KA-------GDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLL 166 (420)
T ss_dssp HHHHHHHHHHTHHHHC------CT-------TCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHC
T ss_pred HHHHHHHHHHhhhccc------CC-------CCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhh
Confidence 9999988887642211 00 1244444444 33 56666778899999999 78889999999999
Q ss_pred hhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcc
Q psy9807 239 QRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKW 318 (561)
Q Consensus 239 ~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~ 318 (561)
.+ .+.+|+++..++.+|.+.|+++|.++|++||+|+++|++|+.+.... .... . .+|+++.++||
T Consensus 167 ~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~-~~~~----~-~~di~~~s~sK- 231 (420)
T 1t3i_A 167 SE--------KTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPL-DVQL----I-DCDWLVASGHK- 231 (420)
T ss_dssp CT--------TEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC-CHHH----H-TCSEEEEEGGG-
T ss_pred CC--------CceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccC-chhh----c-CCCEEEEehhh-
Confidence 76 57788999999999999999999999999999999999998543321 1111 1 25999999999
Q ss_pred ccccccceeEEecChhhHHHhhccCCCc--cccCCCCCCCCC--Cccccc-CcCCc-chHHHHHHHHHhhHHHHHHHHHH
Q psy9807 319 MLVTFDCSAMWLKDPSWVVNAFNVDPLY--LKHDQQGSAPDY--RHWQIP-LGRRF-RSLKLWFVLRLLGVKYLQEYIRK 392 (561)
Q Consensus 319 l~~P~g~g~l~~r~~~~l~~~~~~~~~y--l~~~~~~~~~~~--~~~~~~-~sr~~-~al~lw~~l~~~g~~g~~~~~~~ 392 (561)
+++|.|+|++++++ ..+.........+ ...... ....+ ...... ++... ..+.++.+++.+...+++++.++
T Consensus 232 ~~~~~g~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 309 (420)
T 1t3i_A 232 MCAPTGIGFLYGKE-EILEAMPPFFGGGEMIAEVFF-DHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNY 309 (420)
T ss_dssp TTSCTTCEEEEECH-HHHHHSCCCSCSTTSEEEECS-SCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred hcCCCceEEEEEch-HHHhhcCceecCCCccccccc-cccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 55677889888853 3332211111111 000000 00000 000111 11111 12334446666666678899999
Q ss_pred HHHHHHHHHHHHhcCCCeEEeccc-----cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q psy9807 393 QISLAKEFEQLVRSDDRFEVIYEV-----LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEF 467 (561)
Q Consensus 393 ~~~la~~l~~~l~~~~g~~l~~~~-----~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~ 467 (561)
..++++++.+.|++.|+++++.+. ..++++|++.+
T Consensus 310 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------- 349 (420)
T 1t3i_A 310 EVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAG---------------------------------------- 349 (420)
T ss_dssp HHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETT----------------------------------------
T ss_pred HHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECC----------------------------------------
Confidence 999999999999999899987654 25555553321
Q ss_pred HHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee--------eECC-EEEEEEEecCCCCCHHH
Q psy9807 468 EQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS--------KIRD-VYFLRMAVCSRYSESSD 538 (561)
Q Consensus 468 ~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~--------~~~g-~~~lR~~~~~~~t~~~d 538 (561)
.+ ..++.+.|.+.|.. +.+. ...| ..++|+++. ..++++|
T Consensus 350 ---------------------------~~--~~~~~~~l~~~gi~-v~~~~~~~~~~~~~~g~~~~iRis~~-~~~~~~~ 398 (420)
T 1t3i_A 350 ---------------------------LH--ASDVATMVDQDGIA-IRSGHHCTQPLHRLFDASGSARASLY-FYNTKEE 398 (420)
T ss_dssp ---------------------------BC--HHHHHHHHHTTTEE-CBCSCTTCHHHHHHTTCCCCEEEECC-TTCCHHH
T ss_pred ---------------------------CC--HHHHHHHHHHCCeE-EeeccccchHHHHhcCCCCeEEEecC-CCCCHHH
Confidence 11 23566777777643 3322 1112 568999966 5668899
Q ss_pred HHHHHHHHHHHHHHH
Q psy9807 539 MIYSWNEIKTLTEEL 553 (561)
Q Consensus 539 i~~l~~~l~~~~~~~ 553 (561)
+++++++|+++.+++
T Consensus 399 i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 399 IDLFLQSLQATIRFF 413 (420)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987765
No 36
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.91 E-value=8.6e-23 Score=213.06 Aligned_cols=343 Identities=11% Similarity=-0.028 Sum_probs=224.5
Q ss_pred ccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVA 171 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~a 171 (561)
|+.+..+++.++.++ +.+...+.. ..++...++.+++.+++++++|.+++ ...+||+|||+|+..+
T Consensus 36 ~l~~~~~~~~~~~v~-~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~--------~~v~~t~g~t~al~~~ 101 (393)
T 1vjo_A 36 LLLGPGPSNAHPSVL-QAMNVSPVG-----HLDPAFLALMDEIQSLLRYVWQTENP--------LTIAVSGTGTAAMEAT 101 (393)
T ss_dssp EECSSSCCCCCHHHH-HHHSSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCCCS--------CEEEESSCHHHHHHHH
T ss_pred eeccCCCCCCCHHHH-HHHhccccc-----ccCHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEeCchHHHHHHH
Confidence 444443344444443 333333322 13445678889999999999998642 1479999999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch--HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcC
Q psy9807 172 LLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE--LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMC 247 (561)
Q Consensus 172 l~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s--~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g 247 (561)
+.++... ++++++.... .+ +..++...|.+++.+|. .++.+|+++|+++|.+ .
T Consensus 102 ~~~~~~~-----------------gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~---- 158 (393)
T 1vjo_A 102 IANAVEP-----------------GDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALET--H---- 158 (393)
T ss_dssp HHHHCCT-----------------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH--H----
T ss_pred HHhccCC-----------------CCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhh--C----
Confidence 7765211 2245555444 55 77777888999999999 7788999999999976 3
Q ss_pred CceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccccccee
Q psy9807 248 SDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSA 327 (561)
Q Consensus 248 ~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~ 327 (561)
.+.+|+++..++.+|.+.|+++|+++|++||+++++|++|+.+....+ +.. ..+|+++.++|||++.|.++|+
T Consensus 159 -~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~-~~~di~~~s~sK~l~~~~~~G~ 231 (393)
T 1vjo_A 159 -RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIF-----LDA-WGVDLAYSCSQKGLGCSPGASP 231 (393)
T ss_dssp -CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCC-----TTT-TTCSEEECCSSSTTCSCSSCEE
T ss_pred -CceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCc-----ccc-cCccEEEEcCcccccCCCceEE
Confidence 355788888999999999999999999999999999999984322111 111 2469999999999999999999
Q ss_pred EEecChhhHHHhhcc---CCCccccCCCCCCCCC-CcccccC-cCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy9807 328 MWLKDPSWVVNAFNV---DPLYLKHDQQGSAPDY-RHWQIPL-GRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFE 401 (561)
Q Consensus 328 l~~r~~~~l~~~~~~---~~~yl~~~~~~~~~~~-~~~~~~~-sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~ 401 (561)
+++++. .+...... ...+...... ...+ ....... +.. .....+..+++.+...+++++.++..++++++.
T Consensus 232 l~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 308 (393)
T 1vjo_A 232 FTMSSR-AIEKLQRRRTKVANWYLDMNL--LGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLW 308 (393)
T ss_dssp EEECHH-HHHHHHTCSSCCSCSTTCHHH--HHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEECHH-HHHHHhccCCCCCceecCcHh--hhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 998653 33222111 0111100000 0000 0000011 111 223445566666656678889999999999999
Q ss_pred HHHhcCCCeEEecccc---ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhh
Q psy9807 402 QLVRSDDRFEVIYEVL---MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 478 (561)
Q Consensus 402 ~~l~~~~g~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~ 478 (561)
+.|++. ++++..+.. .++
T Consensus 309 ~~L~~~-g~~~~~~~~~~~~~~---------------------------------------------------------- 329 (393)
T 1vjo_A 309 ERLEDI-GLSLHVEKEYRLPTL---------------------------------------------------------- 329 (393)
T ss_dssp HHHHHT-TCCBSSCGGGBCSSE----------------------------------------------------------
T ss_pred HHHHHc-CCcccCCccccCCcE----------------------------------------------------------
Confidence 999988 887765432 122
Q ss_pred hhhhhhhcceeeecCCCcHHHHHHHHHHHhC-CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 479 VIYEVLMGLVCFRLKGPNEINEKLLKRINGN-GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 479 ~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
++|+++. +....++.+.|.++ |.....+....+..++|+++..+.++++++++++++|+++.
T Consensus 330 ---------~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 330 ---------TTVCIPD-GVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp ---------EEEECCT-TCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred ---------EEEEcCC-CCCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 2333211 11135688888887 75554433333456899997667778889999999998763
No 37
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.91 E-value=8.7e-22 Score=204.27 Aligned_cols=343 Identities=11% Similarity=0.057 Sum_probs=217.6
Q ss_pred cccccCCCCCChHHHHHHHHHhhccc--c-ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHH
Q psy9807 91 KFHAYFPTANSYPAIVADILSDSIAC--I-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 167 (561)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n~--~-~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~a 167 (561)
.|+++...++.++.++..+....-+. + ...+..+........++.+++++++|.+++ ..++|+|||+|
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~a 73 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS---------EIFFTSCATES 73 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG---------GEEEESCHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC---------eEEEECCHHHH
Confidence 46666666666666554443332211 1 112233344567788899999999998754 57999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHH---HhccCCeEEeeC-CCCccChhhHHHHHhhhc
Q psy9807 168 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVM---LDWLGKMLDLPK-EFLACSGGKGGGVIQRKS 242 (561)
Q Consensus 168 nl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa---~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~ 242 (561)
+..++.+++.... .+ ++++++.... .++..++ ...|.+++.+|. .++.+|+++|+++|.+
T Consensus 74 ~~~~~~~~~~~~~------~~-------gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 138 (384)
T 1eg5_A 74 INWILKTVAETFE------KR-------KRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-- 138 (384)
T ss_dssp HHHHHHHHHHHTT------TT-------CCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT--
T ss_pred HHHHHHhhhhhcc------CC-------CCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC--
Confidence 9888887653100 00 1234444333 4554444 567889999998 7888999999999876
Q ss_pred hhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC--ceEEechhcccccccCccccccccCccccceeeecCCcccc
Q psy9807 243 DREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD--VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWML 320 (561)
Q Consensus 243 ~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~--~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~ 320 (561)
.+.+|+++..++.+|.+.|+++|.++|++|| +++++|++|+.+.... . +... .+|++++++||+++
T Consensus 139 ------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~-~----~~~~-~~di~~~s~sK~~g 206 (384)
T 1eg5_A 139 ------DTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPF-S----LEKL-EVDYASFSAHKFHG 206 (384)
T ss_dssp ------TEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCC-C----CTTT-CCSEEEEEGGGGTS
T ss_pred ------CCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCccc-C----chhc-CCCEEEecHHHhcC
Confidence 5778888999999999999999999999999 9999999987332111 1 1122 36999999999855
Q ss_pred ccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy9807 321 VTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKE 399 (561)
Q Consensus 321 ~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~ 399 (561)
|.|+|++++++...+ . .++.... ..... ..++.. .....++.+++.+ .++++++.++..+++++
T Consensus 207 -~~G~G~~~~~~~~~~------~-~~~~~~~--~~~~~----~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~ 271 (384)
T 1eg5_A 207 -PKGVGITYIRKGVPI------R-PLIHGGG--QERGL----RSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSK 271 (384)
T ss_dssp -CTTCEEEEECTTSCC------C-CSBCSSC--TTTTT----BCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHH
T ss_pred -CCceEEEEEcCCCcc------c-cccccCc--ccccc----cCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHH
Confidence 667899988664100 1 1111000 00000 011111 1222334444442 35678889999999999
Q ss_pred HHHHHhcCCCeEEecccc---ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCch
Q psy9807 400 FEQLVRSDDRFEVIYEVL---MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR 476 (561)
Q Consensus 400 l~~~l~~~~g~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~ 476 (561)
+.+.|++ +++++..++. ...+.|.+
T Consensus 272 l~~~L~~-~g~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 299 (384)
T 1eg5_A 272 LVSGLMN-LGAHIITPLEISLPNTLSVSF--------------------------------------------------- 299 (384)
T ss_dssp HHHHHHT-TTCEECSCTTSBCTTEEEEEC---------------------------------------------------
T ss_pred HHHHhCC-CCeEEeCCcccCCCCEEEEEe---------------------------------------------------
Confidence 9999998 6888865432 23333322
Q ss_pred hhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE-------------------CCEEEEEEEecCCCCCHH
Q psy9807 477 FEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI-------------------RDVYFLRMAVCSRYSESS 537 (561)
Q Consensus 477 ~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-------------------~g~~~lR~~~~~~~t~~~ 537 (561)
.+.+ ..++.+.|.+.|.....+... .+..++|+++. +.++++
T Consensus 300 ----------------~~~~--~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~~~~ 360 (384)
T 1eg5_A 300 ----------------PNIR--GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLC-KYNTEE 360 (384)
T ss_dssp ----------------TTCC--HHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECC-TTCCHH
T ss_pred ----------------CCCC--HHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECC-CCCCHH
Confidence 2111 345677777766443322111 01368999965 566889
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy9807 538 DMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 538 di~~l~~~l~~~~~~~~~ 555 (561)
|+++++++|+++.+++.+
T Consensus 361 ~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 361 EVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp HHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999998876543
No 38
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.91 E-value=6.6e-23 Score=212.49 Aligned_cols=317 Identities=12% Similarity=0.038 Sum_probs=208.5
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeE-EeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGV-IQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~-~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
.+|...++.+++.+++++++|.+.+ ...+ +|+|||+|+..++.+.... ++++++
T Consensus 46 ~~~~~~~~~~~~~~~la~~~g~~~~--------~~~i~~~~ggt~al~~~~~~~~~~-----------------gd~vi~ 100 (376)
T 3f0h_A 46 RTTEFSSTMLENEKFMLEYAKAPEG--------SKAVFMTCSSTGSMEAVVMNCFTK-----------------KDKVLV 100 (376)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTCCTT--------CEEEEESSCHHHHHHHHHHHHCCT-----------------TCCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEEcCChhHHHHHHHHhccCC-----------------CCeEEE
Confidence 3566778889999999999999753 1334 4889999998877654211 234555
Q ss_pred eccc-c--hHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 202 SPAC-T--ELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 202 ~~s~-~--s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
.... + .+...+...|.+++.+|. .++.+|+++|++++.+ .+.+|+.+...+.+|.+.|+++|+++|++
T Consensus 101 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 172 (376)
T 3f0h_A 101 IDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQ--------NFTGLLVNVDETSTAVLYDTMMIGEFCKK 172 (376)
T ss_dssp EESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTS--------CCCEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred EeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhcc--------CceEEEEecccCCcceecCHHHHHHHHHH
Confidence 5433 3 233455667889999999 7789999999987755 56788888889999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhc-cCCC-ccccCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFN-VDPL-YLKHDQQGSA 355 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~-~~~~-yl~~~~~~~~ 355 (561)
||+++++|++++++....+ .. -. .+|+++.++||++++|.|+|++++++. .+..... .... |+..... .
T Consensus 173 ~~~~li~D~~~~~~~~~~~-~~--~~---~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~ 243 (376)
T 3f0h_A 173 NNMFFVCDCVSAFLADPFN-MN--EC---GADVMITGSQKVLACPPGISVIVLAPR-GVERVEKSKVRTMYFDLKDA--L 243 (376)
T ss_dssp TTCEEEEECTTTTTTSCCC-HH--HH---TCSEEEEETTTTTCCCSSCEEEEECHH-HHHHHHTCCCCCSTTCHHHH--H
T ss_pred cCCEEEEEcCccccCcccc-cc--cc---CccEEEecCcccccCCCceEEEEECHH-HHHHhhcCCCCceeecHHHH--H
Confidence 9999999999886543211 10 01 249999999999998999999887553 3322211 1112 1110000 0
Q ss_pred CCCCcccccCcCCc-chHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccc
Q psy9807 356 PDYRHWQIPLGRRF-RSLKLWFVLRLLGVK-YLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLG 433 (561)
Q Consensus 356 ~~~~~~~~~~sr~~-~al~lw~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~ 433 (561)
..........+-.. ....+..+++.+... +++++.++..++++++.+.|++. ++++..+...+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~----------- 311 (376)
T 3f0h_A 244 KNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELVSESPANGVT----------- 311 (376)
T ss_dssp HHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEECCSSBBTTEE-----------
T ss_pred hhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccCccccCceEE-----------
Confidence 00000000011111 114455666666666 78999999999999999999987 67776543322221
Q ss_pred cccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhC-CcE
Q psy9807 434 RRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGN-GKI 512 (561)
Q Consensus 434 ~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~ 512 (561)
.+...+.+ ..++.+.|.++ |..
T Consensus 312 -------------------------------------------------------~~~~~~~~--~~~l~~~l~~~~gi~ 334 (376)
T 3f0h_A 312 -------------------------------------------------------SVHPTTAN--AYDIFLKLKDEYGIW 334 (376)
T ss_dssp -------------------------------------------------------EEEESSSC--HHHHHHHHHHHSSEE
T ss_pred -------------------------------------------------------EEeCCCCC--HHHHHHHHHHhCCEE
Confidence 11111111 35788888888 644
Q ss_pred EEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 513 HLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 513 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
...+....+..++|+++.. .++++|+++++++|+++.+
T Consensus 335 v~~g~~~~~~~~lRis~~~-~~t~e~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 335 ICPNGGEMKDTIFRVGHIG-ALTHEDNTTLVNAFKDLQK 372 (376)
T ss_dssp CEECCGGGTTTCEEEECCS-SCCHHHHHHHHHHHHHHHH
T ss_pred EecCccccCCCEEEEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 4333222344589999764 5688999999999988754
No 39
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.91 E-value=8.1e-23 Score=210.36 Aligned_cols=333 Identities=11% Similarity=-0.049 Sum_probs=212.9
Q ss_pred ccccCCCCC-ChHHHHHHHHHhhc---ccccccc---ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE-eCC
Q psy9807 92 FHAYFPTAN-SYPAIVADILSDSI---ACIGFTW---IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI-QGT 163 (561)
Q Consensus 92 ~~~~~~~~~-~~~~~~~~~l~~~~---n~~~~~~---~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~-t~g 163 (561)
.+.|.+++. .++.++..+..... ++..+.+ ..++.+.++-+++++.+++++|.++. ...+| |+|
T Consensus 6 ~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~--------~~v~f~t~~ 77 (361)
T 3m5u_A 6 KINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDD--------YEVLFLQGG 77 (361)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTT--------EEEEEESSH
T ss_pred eEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEEcCc
Confidence 344555544 34555555544433 2222222 23677889999999999999999743 25677 999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce-EEeccc--chHHHHHHhccCCeEEeeC-CCCc--cChhhHHHH
Q psy9807 164 ASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL-IASPAC--TELEVVMLDWLGKMLDLPK-EFLA--CSGGKGGGV 237 (561)
Q Consensus 164 gT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~-vv~~s~--~s~~kaa~~~g~~v~~v~~-~~g~--~d~~~Le~~ 237 (561)
||+++..++.... . ++++ ++.++. ..+.+.++..|.++..+++ .++. .+++. +
T Consensus 78 ~T~a~n~~~~~~~-~-----------------~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~-- 136 (361)
T 3m5u_A 78 ASLQFAMIPMNLA-L-----------------NGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E-- 136 (361)
T ss_dssp HHHHHHHHHHHHC-C-----------------SSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--
T ss_pred HHHHHHHHHHhcC-C-----------------CCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--
Confidence 9999877665421 0 1233 445444 4444445556889999998 5554 57777 4
Q ss_pred HhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCc
Q psy9807 238 IQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHK 317 (561)
Q Consensus 238 i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK 317 (561)
|.+ .+.+|++++.+|.+|.+.|. +++ +|+++|||++++.+....+ ++ ..|++++++||
T Consensus 137 l~~--------~t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id-----~~---~~d~~~~s~~K 194 (361)
T 3m5u_A 137 FSD--------NADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVD-----FS---NIALFYGGVQK 194 (361)
T ss_dssp CCT--------TSSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCC-----CT---TEEEEEEETTT
T ss_pred cCC--------CCCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCC-----cc---cCCEEEEechh
Confidence 765 46678899999999998652 444 4999999999987655443 22 34999999999
Q ss_pred cccccccceeEEecChhhHHHhhc-cCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHHHH
Q psy9807 318 WMLVTFDCSAMWLKDPSWVVNAFN-VDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRKQI 394 (561)
Q Consensus 318 ~l~~P~g~g~l~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~~~ 394 (561)
|++ |.|+|++++++.. +..... ..+.|+..... .......++.. +....+-.+++++-.. |++++.++..
T Consensus 195 ~~g-p~G~g~l~~~~~~-~~~~~~~~~p~~~~~~~~-----~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~ 267 (361)
T 3m5u_A 195 NAG-ISGLSCIFIRKDM-LERSKNKQIPSMLNYLTH-----AENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNS 267 (361)
T ss_dssp TSS-CTTCEEEEEEHHH-HHHHHTCCCCGGGCHHHH-----HHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred ccC-CCccEEEEEcHHH-HhhhcCCCCCceeehHHH-----hhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 996 9999999998653 222111 12333211000 00000001111 2345666777877777 8999999999
Q ss_pred HHHHHHHHHHhcCCCe-EEecccc---ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q psy9807 395 SLAKEFEQLVRSDDRF-EVIYEVL---MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQL 470 (561)
Q Consensus 395 ~la~~l~~~l~~~~g~-~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~ 470 (561)
++++++.+.|++++++ +++.++. ..+
T Consensus 268 ~l~~~l~~~L~~~~g~~~~~~~~~~rs~~i-------------------------------------------------- 297 (361)
T 3m5u_A 268 QKATMLYECIDLSNGFYKGHADKKDRSLMN-------------------------------------------------- 297 (361)
T ss_dssp HHHHHHHHHHHTSTTSEEESSCGGGBCSSE--------------------------------------------------
T ss_pred HHHHHHHHHHHHCCCeeeccCCHHHcCCeE--------------------------------------------------
Confidence 9999999999999766 5543221 123
Q ss_pred hccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 471 VRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 471 l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
++|.+++.......+...|.+.|.....+. .....+|+|+++ ++|++||++++++|+++.
T Consensus 298 -----------------vsf~~~~~~~~~~~~~~~L~~~gI~~~~g~--~~~g~iRiS~~~-~~t~edId~l~~al~~~~ 357 (361)
T 3m5u_A 298 -----------------VSFNIAKNKDLEPLFVKEAEEAGMIGLKGH--RILGGIRASIYN-ALNLDQVKTLCEFMKEFQ 357 (361)
T ss_dssp -----------------EEEEESSCTTHHHHHHHHHHHTTEECCBCC--TTTCSEEEECCT-TSCHHHHHHHHHHHHHHH
T ss_pred -----------------EEEECCCchhhhHHHHHHHHHCCCEEecCC--CccCeEEEEccC-CCCHHHHHHHHHHHHHHH
Confidence 444443311222467777877775532221 112359999876 568899999999999876
Q ss_pred HH
Q psy9807 551 EE 552 (561)
Q Consensus 551 ~~ 552 (561)
++
T Consensus 358 ~~ 359 (361)
T 3m5u_A 358 GK 359 (361)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 40
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.91 E-value=1.1e-23 Score=218.90 Aligned_cols=337 Identities=9% Similarity=-0.062 Sum_probs=207.6
Q ss_pred ccccccCCCCCChHHHHHHHHHhh---ccccccc---cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE-eC
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDS---IACIGFT---WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI-QG 162 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~---~n~~~~~---~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~-t~ 162 (561)
..|+.+..+++.++.++..+.... .++..+. ...++.+.++-+++++.+++++|.|+. ...+| |+
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~--------~evif~t~ 98 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSN--------YKVLFCHG 98 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTT--------EEEEEEES
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEEcC
Confidence 356655555566667665553222 2222221 224677788888999999999999753 14688 69
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE-Eeccc--chHHHHHHhccCCeEEeeCC---CCc-cChhhHH
Q psy9807 163 TASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI-ASPAC--TELEVVMLDWLGKMLDLPKE---FLA-CSGGKGG 235 (561)
Q Consensus 163 ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v-v~~s~--~s~~kaa~~~g~~v~~v~~~---~g~-~d~~~Le 235 (561)
|||+++..++.... . . +++++ +..+. ..+.+.++..| ++..+|++ .|. +++++++
T Consensus 99 ~~T~a~n~ai~~l~----~----~---------gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~ 160 (386)
T 3qm2_A 99 GGRGQFAGVPLNLL----G----D---------KTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMRE 160 (386)
T ss_dssp CTTHHHHHHHHHHC----T----T---------CCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGG
T ss_pred CchHHHHHHHHhcc----C----C---------CCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHH
Confidence 99999877765431 0 0 12343 33333 33444444456 78888875 675 8999988
Q ss_pred HHHhhhchhhcCCceEEEEEecCCCCCccc-cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeec
Q psy9807 236 GVIQRKSDREMCSDLLQVVATLGTTNCCAF-DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFN 314 (561)
Q Consensus 236 ~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i-dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~ 314 (561)
.+|.+ .+.+|++++.+|.+|.+ +|+++|+ +|+++|||++++.+....+ ++.+ |.++++
T Consensus 161 ~~l~~--------~t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pid-----v~~~---~~~~~s 219 (386)
T 3qm2_A 161 WQLSD--------NAAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLD-----VSRY---GVIYAG 219 (386)
T ss_dssp CCCCT--------TCSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCC-----GGGC---SEEEEE
T ss_pred hhcCC--------CCcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCC-----cccc---CEEEEe
Confidence 87766 46678999999999995 9999996 7999999999987665443 2223 667899
Q ss_pred CCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHH
Q psy9807 315 PHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRK 392 (561)
Q Consensus 315 ~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~ 392 (561)
+|||++ |.|+|++++|+... .......+.|+.... ..+ .....++.. +....+-.+++.+-.. |++++.++
T Consensus 220 ~hK~lG-P~G~g~l~v~~~~~-~~~~~~~p~~~~~~~---~~~--~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~ 292 (386)
T 3qm2_A 220 AQKNIG-PAGLTLVIVREDLL-GKAHESCPSILDYTV---LND--NDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKI 292 (386)
T ss_dssp TTTTTC-CTTEEEEEEEGGGC-SCCCTTSCGGGCHHH---HHH--C-------CCSHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccC-CCccEEEEECHHHH-hhhcccCCcHHHHHH---Hhh--cCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999996 99999999987531 111111122211000 000 000001111 2456677788888888 89999999
Q ss_pred HHHHHHHHHHHHhcCCCe-EEeccc--cc-cceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q psy9807 393 QISLAKEFEQLVRSDDRF-EVIYEV--LM-GLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFE 468 (561)
Q Consensus 393 ~~~la~~l~~~l~~~~g~-~l~~~~--~~-~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~ 468 (561)
..++++++.+.|+++ ++ ....++ .. .+
T Consensus 293 ~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~i------------------------------------------------ 323 (386)
T 3qm2_A 293 NQQKAELLYGVIDNS-DFYRNDVAQANRSRMN------------------------------------------------ 323 (386)
T ss_dssp HHHHHHHHHHHHHTC-SSEECCBCGGGBCSSE------------------------------------------------
T ss_pred HHHHHHHHHHHHHHC-CCcccCCCHHHcCceE------------------------------------------------
Confidence 999999999999987 54 222111 11 23
Q ss_pred HHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9807 469 QLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKT 548 (561)
Q Consensus 469 ~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 548 (561)
++|.+++ ......+.+.|.+.|.+...+.. ....+|+|+.+ ++|++|||+++++|++
T Consensus 324 -------------------v~f~~~~-~~~~~~~~~~L~~~gI~~~~g~~--~~~~iRiS~~~-~~t~edId~l~~~l~~ 380 (386)
T 3qm2_A 324 -------------------VPFQLAD-NTLDKVFLEESFAAGLHALKGHR--VVGGMRASIYN-AMPIEGVKALTDFMID 380 (386)
T ss_dssp -------------------EEEEESS-GGGHHHHHHHHHHTTEECCBCCT--TTCSEEEECCT-TSCHHHHHHHHHHHHH
T ss_pred -------------------EEEECCC-ccccHHHHHHHHHCCCEEeCCCC--CcCeEEEEcCC-CCCHHHHHHHHHHHHH
Confidence 4444432 12234677778777755332211 11349999764 6688999999999998
Q ss_pred HHHH
Q psy9807 549 LTEE 552 (561)
Q Consensus 549 ~~~~ 552 (561)
+.++
T Consensus 381 ~~~~ 384 (386)
T 3qm2_A 381 FERR 384 (386)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
No 41
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.90 E-value=3.1e-22 Score=208.94 Aligned_cols=349 Identities=11% Similarity=0.010 Sum_probs=224.2
Q ss_pred CCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHH
Q psy9807 88 HSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 167 (561)
Q Consensus 88 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~a 167 (561)
..|+.+.+.+++..++..+.+.+...+.. .| +|.......++.+++++++|.+++ ...++|+|||++
T Consensus 15 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~~~~~~--------~~v~~~~g~t~a 81 (396)
T 2ch1_A 15 IIPEKIMMGPGPSNCSKRVLTAMTNTVLS---NF--HAELFRTMDEVKDGLRYIFQTENR--------ATMCVSGSAHAG 81 (396)
T ss_dssp CCCCCBCCSSSSCCCCHHHHHHTTSCCCC---TT--CHHHHHHHHHHHHHHHHHHTCCCS--------CEEEESSCHHHH
T ss_pred CCCcceeecCCCCCCCHHHHHHhcccccc---CC--ChhHHHHHHHHHHHHHHHhCCCCC--------cEEEECCcHHHH
Confidence 34556666655554444344444333321 12 555556778899999999998652 136899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH--HHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhch
Q psy9807 168 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL--EVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSD 243 (561)
Q Consensus 168 nl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~--~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~ 243 (561)
+..++.+.... ++++++.... .+. .+.+...|.+++.+|. .++.+|+++|+++|++ .
T Consensus 82 l~~~~~~~~~~-----------------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~ 142 (396)
T 2ch1_A 82 MEAMLSNLLEE-----------------GDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIEL--H 142 (396)
T ss_dssp HHHHHHHHCCT-----------------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHH--H
T ss_pred HHHHHHHhcCC-----------------CCeEEEEcCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHh--C
Confidence 98877664210 2345555444 333 3466778899999999 7788999999999976 3
Q ss_pred hhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc
Q psy9807 244 REMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF 323 (561)
Q Consensus 244 ~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~ 323 (561)
.+.+|+++..++.||.+.|+++|+++|++||+++++|+||+.+....+ +... .+|+++.++||++++|.
T Consensus 143 -----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~ 211 (396)
T 2ch1_A 143 -----QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPP 211 (396)
T ss_dssp -----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCS
T ss_pred -----CCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEcCCccccCCC
Confidence 356788888899999999999999999999999999999984322111 1111 35999999999999999
Q ss_pred cceeEEecChhhHHHhhccC----CCccccCC-----CCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHH
Q psy9807 324 DCSAMWLKDPSWVVNAFNVD----PLYLKHDQ-----QGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQ 393 (561)
Q Consensus 324 g~g~l~~r~~~~l~~~~~~~----~~yl~~~~-----~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~ 393 (561)
++|++++++ ..+.. +... ..|..... .+. ...... ..++.. .....+..+++.+..++++++.++.
T Consensus 212 g~g~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 287 (396)
T 2ch1_A 212 GITPISISP-KALDV-IRNRRTKSKVFYWDLLLLGNYWGC-YDEPKR-YHHTVASNLIFALREALAQIAEEGLENQIKRR 287 (396)
T ss_dssp SCEEEEECH-HHHHH-HHTCSSCCSCGGGCHHHHHHHTTC-SSSCCC-CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred CeEEEEECH-HHHHh-hhhccCcccceEechHHHHHhhhh-hcccCC-CCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 999988865 33322 2111 11111100 000 000000 111111 1223445566666667788999999
Q ss_pred HHHHHHHHHHHhcCCCeEEeccccc----cceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q psy9807 394 ISLAKEFEQLVRSDDRFEVIYEVLM----GLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQ 469 (561)
Q Consensus 394 ~~la~~l~~~l~~~~g~~l~~~~~~----~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~ 469 (561)
.++++++.+.|++. |++++.+... .+++|
T Consensus 288 ~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~---------------------------------------------- 320 (396)
T 2ch1_A 288 IECAQILYEGLGKM-GLDIFVKDPRHRLPTVTGI---------------------------------------------- 320 (396)
T ss_dssp HHHHHHHHHHHHHH-TCCBSSCSGGGBCTTEEEE----------------------------------------------
T ss_pred HHHHHHHHHHHHHC-CCeeccCCccccCCceEEE----------------------------------------------
Confidence 99999999999988 8877654321 12233
Q ss_pred HhccCchhhhhhhhhhcceeeecC-CCcHHHHHHHHHHHhC-CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q psy9807 470 LVRSDDRFEVIYEVLMGLVCFRLK-GPNEINEKLLKRINGN-GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIK 547 (561)
Q Consensus 470 ~l~~~~~~~~~~~~~~~~v~f~~~-~~~~~~~~l~~~L~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 547 (561)
+.+ +.+ ..++.++|.++ |.....+....+..++|++++.+.++++|+++++++|+
T Consensus 321 ---------------------~~~~~~~--~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~ 377 (396)
T 2ch1_A 321 ---------------------MIPKGVD--WWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFK 377 (396)
T ss_dssp ---------------------ECCTTCC--HHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred ---------------------EcCCCCC--HHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHH
Confidence 321 111 34677788765 65443322222345899998667778999999999999
Q ss_pred HHHHHH
Q psy9807 548 TLTEEL 553 (561)
Q Consensus 548 ~~~~~~ 553 (561)
++.+++
T Consensus 378 ~~l~~~ 383 (396)
T 2ch1_A 378 ESLKAT 383 (396)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 987765
No 42
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.90 E-value=4.3e-22 Score=206.79 Aligned_cols=350 Identities=11% Similarity=0.016 Sum_probs=220.1
Q ss_pred ccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHH
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATL 169 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl 169 (561)
|+++.+.+++...+..+.+.+...... + .+|.......++++++++.++..... +....+||+|||+|+.
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~----~-~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~v~~~~g~t~al~ 73 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLG----H-TSPEFVSIFQRVLKNTRAVFKSAAAS-----KSQPFVLAGSGTLGWD 73 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCC----T-TSHHHHHHHHHHHHHHHHHTTCCGGG-----TCEEEEEESCTTHHHH
T ss_pred ccceeecCCCcCchHHHHHHHhccccc----c-CCHHHHHHHHHHHHHHHHHhCCCCCC-----CCceEEEcCchHHHHH
Confidence 455666766655544343443333221 2 26666666777888999998875210 0125789999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchh
Q psy9807 170 VALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC---TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDR 244 (561)
Q Consensus 170 ~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~---~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~ 244 (561)
.++.+..... .+ ++++++..+. .++.+++...|.+++.+|. .++.+|+++|+++|++ .
T Consensus 74 ~~~~~~~~~~-------~~-------gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~--~- 136 (385)
T 2bkw_A 74 IFASNFILSK-------AP-------NKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQ--N- 136 (385)
T ss_dssp HHHHHHSCTT-------CS-------CCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHH--S-
T ss_pred HHHHHHhccC-------CC-------CCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhc--C-
Confidence 8877642100 00 2345555343 4444666778889999987 4677999999999965 2
Q ss_pred hcCCceEEEEEecCCCCCccccCHHHHHHHHhhc--CceEEechhcccccccCccccccccCccccceeeecCCcccccc
Q psy9807 245 EMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK--DVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT 322 (561)
Q Consensus 245 ~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~--~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P 322 (561)
.+.+|+++..++.||.+.|+++|+++|++| |+++|+|++|+.+....+ +... .+|++++++|||+++|
T Consensus 137 ----~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~ 206 (385)
T 2bkw_A 137 ----SYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-----FDEW-GVDFALTASQKAIGAP 206 (385)
T ss_dssp ----CCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCC
T ss_pred ----CCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-----cccc-CceEEEecCccccccC
Confidence 356788899999999999999999999999 999999999985433211 1111 3599999999999999
Q ss_pred ccceeEEecChhhHHHhhc-----cCCCccccCCCCCCCCCCcccc-----cCcCC-cchHHHHHHHHHhhHHHHHHHHH
Q psy9807 323 FDCSAMWLKDPSWVVNAFN-----VDPLYLKHDQQGSAPDYRHWQI-----PLGRR-FRSLKLWFVLRLLGVKYLQEYIR 391 (561)
Q Consensus 323 ~g~g~l~~r~~~~l~~~~~-----~~~~yl~~~~~~~~~~~~~~~~-----~~sr~-~~al~lw~~l~~~g~~g~~~~~~ 391 (561)
.|+|++++++. .+...+. ....|...... .......+.. .++.. .....+..+++.+...+++++.+
T Consensus 207 ~G~G~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 284 (385)
T 2bkw_A 207 AGLSISLCSSR-FMDYALNDSKNGHVHGYFSSLRR-WTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWD 284 (385)
T ss_dssp SCEEEEEECHH-HHHHHTCHHHHCCCSCSTTCHHH-HHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CcceEEEEcHH-HHHHHHhhccCCCCCceeecHHH-HhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHH
Confidence 99999998653 3321121 01111100000 0000000000 01111 12234455666655566888899
Q ss_pred HHHHHHHHHHHHH-hcCCCeEEeccc-----cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHH
Q psy9807 392 KQISLAKEFEQLV-RSDDRFEVIYEV-----LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAK 465 (561)
Q Consensus 392 ~~~~la~~l~~~l-~~~~g~~l~~~~-----~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~ 465 (561)
+..++++++.+.| ++. +++++.+. ..++
T Consensus 285 ~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~--------------------------------------------- 318 (385)
T 2bkw_A 285 LHREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGL--------------------------------------------- 318 (385)
T ss_dssp HHHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSC---------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhc-CceecccCcccccCCce---------------------------------------------
Confidence 9999999999999 887 88876431 1233
Q ss_pred HHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE--CCEEEEEEE-ecC--CCCCHHHHH
Q psy9807 466 EFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI--RDVYFLRMA-VCS--RYSESSDMI 540 (561)
Q Consensus 466 ~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--~g~~~lR~~-~~~--~~t~~~di~ 540 (561)
++|++.+ ..++.++|.+.|.. +.+... .+..++|++ +.. +.++++|++
T Consensus 319 ----------------------~~~~~~~----~~~~~~~l~~~gi~-v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~ 371 (385)
T 2bkw_A 319 ----------------------TAVYVAD----PPDVIAFLKSHGVV-IAGGIHKDIGPKYIRIGHMGVTACNKNLPYMK 371 (385)
T ss_dssp ----------------------EEEECSC----HHHHHHHHHHTTEE-CBCCCCTTTGGGEEEECCCGGGTSSTTCTHHH
T ss_pred ----------------------EEEecCC----HHHHHHHHHHCCeE-EeCCCCcccCCCEEEEEccccccccCCHHHHH
Confidence 3333322 45678888777644 333221 235689998 542 245778999
Q ss_pred HHHHHHHHHHH
Q psy9807 541 YSWNEIKTLTE 551 (561)
Q Consensus 541 ~l~~~l~~~~~ 551 (561)
+++++|+++.+
T Consensus 372 ~~~~~l~~~~~ 382 (385)
T 2bkw_A 372 NCFDLIKLALQ 382 (385)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 43
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.89 E-value=1.9e-21 Score=205.63 Aligned_cols=300 Identities=12% Similarity=0.009 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
.....++.+++++++|.+. .+++++||+||..++.+... + ++.+++.... .
T Consensus 108 ~~~~~~l~~~la~~~g~~~-----------~i~~~sGs~a~~~al~~l~~----------~-------gd~vl~~~~~h~ 159 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTTG-----------AIVFSTGYMANLGIISTLAG----------K-------GEYVILDADSHA 159 (427)
T ss_dssp CHHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHSC----------T-------TCEEEEETTCCH
T ss_pred cHHHHHHHHHHHHHhCCCc-----------eEEecCcHHHHHHHHHHhcC----------C-------CCEEEECCcccH
Confidence 3556667777888888753 48889999999887665311 0 1223333333 7
Q ss_pred hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech
Q psy9807 207 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 207 s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa 286 (561)
++..+++..|.+++.+| .+|+++|++.|++ ... ..+.+|+.+...+.+|.+.|+++|+++|++||+++++|+
T Consensus 160 ~~~~~~~~~g~~~~~~~----~~d~~~le~~l~~--~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~De 231 (427)
T 2w8t_A 160 SIYDGCQQGNAEIVRFR----HNSVEDLDKRLGR--LPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDE 231 (427)
T ss_dssp HHHHHHHHSCSEEEEEC----TTCHHHHHHHHHT--SCS--SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHcCCeeEEeC----CCCHHHHHHHHHh--ccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEEC
Confidence 77888888888888888 6899999999976 321 156788888888999999999999999999999999999
Q ss_pred hcccccccCccccccc--cCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccc
Q psy9807 287 AYAGSAFICPENRYLM--KGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQI 363 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~--~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (561)
+|+++... +..+... .++ ..+|++..++||+++ +.| |+++.++ ..+.........|...
T Consensus 232 a~~~~~~~-~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~g-G~v~~~~-~l~~~l~~~~~~~~~~-------------- 293 (427)
T 2w8t_A 232 AHSMGFFG-PNGRGVYEAQGLEGQIDFVVGTFSKSVG-TVG-GFVVSNH-PKFEAVRLACRPYIFT-------------- 293 (427)
T ss_dssp TTTTTTSS-TTSCCHHHHTTCTTCCSEEEEESSSTTC-SCC-EEEEECC-TTGGGGGGTCHHHHSS--------------
T ss_pred CccccccC-CCCCchHhhcCCCcCCcEEEecchhhhc-cCC-CEEEeCH-HHHHHHHHhccccccc--------------
Confidence 99875442 1122211 122 246999999999998 444 7777654 3222211111122110
Q ss_pred cCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc-cccceeeecccCccccccccchhhH
Q psy9807 364 PLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV-LMGLVCFRLKHWQIPLGRRFRSLKL 441 (561)
Q Consensus 364 ~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~k~ 441 (561)
++-. .....+..+++.+. .++++.++..++++++.+.|++. ++++..++ ..+++.+++.
T Consensus 294 -~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--------------- 354 (427)
T 2w8t_A 294 -ASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLE--------------- 354 (427)
T ss_dssp -CCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEES---------------
T ss_pred -CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEEC---------------
Confidence 1111 11222233444432 24677888899999999999987 88876444 4455444321
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee---e
Q psy9807 442 WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS---K 518 (561)
Q Consensus 442 w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~---~ 518 (561)
......++.+.|.+.|....... .
T Consensus 355 -----------------------------------------------------~~~~~~~l~~~L~~~Gi~v~~~~~~~~ 381 (427)
T 2w8t_A 355 -----------------------------------------------------DQEQAAMMWQALLDGGLYVNMARPPAT 381 (427)
T ss_dssp -----------------------------------------------------SHHHHHHHHHHHHHTTEECEEECTTTS
T ss_pred -----------------------------------------------------CHHHHHHHHHHHHHCCeEEeeeCCCCC
Confidence 12234578888888875443322 2
Q ss_pred ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 519 IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 519 ~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
..+..++|++++. .++++|+++++++|+++.+++.
T Consensus 382 ~~~~~~lRi~~~~-~~t~e~i~~~~~~l~~~l~~~~ 416 (427)
T 2w8t_A 382 PAGTFLLRCSICA-EHTPAQIQTVLGMFQAAGRAVG 416 (427)
T ss_dssp CTTCEEEEEECCT-TCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCeEEEEEeCC-CCCHHHHHHHHHHHHHHHHHhC
Confidence 2346799999774 5588899999999999877654
No 44
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.89 E-value=1.1e-21 Score=201.43 Aligned_cols=330 Identities=14% Similarity=0.096 Sum_probs=209.2
Q ss_pred ccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHH
Q psy9807 92 FHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVA 171 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~a 171 (561)
||++-..++.++.+. +.+...++. |..+....++.+++.+|+++++|.+++ ..+||+|||+|+..+
T Consensus 17 ~l~~~~~~~~~~~v~-~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~~---------~v~~~~g~t~a~~~~ 82 (359)
T 1svv_A 17 SFVNDYSVGMHPKIL-DLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPDA---------DVHFISGGTQTNLIA 82 (359)
T ss_dssp ECSCSCSSCCCHHHH-HHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTTS---------EEEEESCHHHHHHHH
T ss_pred EecCCCcCCCCHHHH-HHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCCc---------cEEEeCCchHHHHHH
Confidence 454433333344443 444444442 223334467888999999999997653 579999999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH--HHHhccCCeEEeeCCCCccChhhHHHHHhhhch-hhcC
Q psy9807 172 LLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV--VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSD-REMC 247 (561)
Q Consensus 172 l~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k--aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~-~~~g 247 (561)
+.+++.. ++++++.... .+... .+...|.+++.+|.+++.+|+++|++.+++ . ...+
T Consensus 83 ~~~~~~~-----------------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~--~~~~~~ 143 (359)
T 1svv_A 83 CSLALRP-----------------WEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHE--NRSEHM 143 (359)
T ss_dssp HHHHCCT-----------------TEEEEEETTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHH--SCSTTS
T ss_pred HHHHhCC-----------------CCEEEEcccchHHHHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHH--HHhccC
Confidence 8775321 1244444444 44444 356678899999987788999999999977 3 1223
Q ss_pred CceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCc-cccceeeecCCccccccc
Q psy9807 248 SDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV-ELADSFNFNPHKWMLVTF 323 (561)
Q Consensus 248 ~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi-~~aDsi~~~~HK~l~~P~ 323 (561)
..+.+|+++.. +.+|.+.| +++|+++|++||+|+|+|++|++..+.........-++ ..+|++++++||++ .|.
T Consensus 144 ~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g-~~~ 221 (359)
T 1svv_A 144 VIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAG-GMF 221 (359)
T ss_dssp CEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTT-CSS
T ss_pred CCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCC-CCC
Confidence 34777877776 57999988 99999999999999999999954322111111111011 24699999999984 588
Q ss_pred cceeEEecChh--hHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy9807 324 DCSAMWLKDPS--WVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFE 401 (561)
Q Consensus 324 g~g~l~~r~~~--~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~ 401 (561)
++|++++++.- .+...... ..+. . ..+. .....+ ...+...+++++.++..++++++.
T Consensus 222 ~~g~l~~~~~~~~~~~~~~~~-~~~~--------~-------~~~~-~~~~~~---~~~l~~~~~~~~~~~~~~~~~~l~ 281 (359)
T 1svv_A 222 GEALIILNDALKPNARHLIKQ-RGAL--------M-------AKGW-LLGIQF---EVLMKDNLFFELGAHSNKMAAILK 281 (359)
T ss_dssp CEEEEECSGGGCTTHHHHHHH-TTCC--------C-------TTTH-HHHHHH---HHHTSTTHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcccHHHHHHHHHhc-CCcc--------c-------ccch-hhHHHH---HHHHhhhhHHHHHHHHHHHHHHHH
Confidence 89999885431 11111000 0110 0 0000 011111 123444567888899999999999
Q ss_pred HHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhh
Q psy9807 402 QLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 481 (561)
Q Consensus 402 ~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~ 481 (561)
+.| +.+++++..+...+.+.+
T Consensus 282 ~~L-~~~~~~~~~~~~~~~~~~---------------------------------------------------------- 302 (359)
T 1svv_A 282 AGL-EACGIRLAWPSASNQLFP---------------------------------------------------------- 302 (359)
T ss_dssp HHH-HHTTCCBSSCCSSSEECB----------------------------------------------------------
T ss_pred HHh-ccCCeEEccCCccceEEE----------------------------------------------------------
Confidence 999 567887765544443222
Q ss_pred hhhhcceeeecCCCcHHHHHHHHHHHhC-CcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 482 EVLMGLVCFRLKGPNEINEKLLKRINGN-GKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 482 ~~~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.. ..++.++|.++ |.... +....+..++|+++. ..++++|+++++++|+++.++
T Consensus 303 ---------~~------~~~~~~~l~~~~gi~v~-~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 303 ---------IL------ENTMIAELNNDFDMYTV-EPLKDGTCIMRLCTS-WATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp ---------EE------EHHHHHHHTTTEECEEE-EEETTTEEEEEEECC-TTCCHHHHHHHHHHHHHC---
T ss_pred ---------Ec------CHHHHHHHHHhcCEEEE-ecccCCCceEEEEcc-CcCCHHHHHHHHHHHHHHHhc
Confidence 11 13678888888 76552 222246789999844 567899999999999887654
No 45
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.89 E-value=1.5e-22 Score=207.88 Aligned_cols=301 Identities=14% Similarity=0.085 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
..+.+++.+|+++++| ++. ..+||+|||+||..++.+++.. ++.+++.... +
T Consensus 42 ~~~~~~l~~~la~~~g-~~~---------~v~~~~~gt~a~~~al~~~~~~-----------------gd~vi~~~~~~~ 94 (356)
T 1v72_A 42 DELTAQVKRKFCEIFE-RDV---------EVFLVPTGTAANALCLSAMTPP-----------------WGNIYCHPASHI 94 (356)
T ss_dssp SHHHHHHHHHHHHHHT-SCC---------EEEEESCHHHHHHHHHHTSCCT-----------------TEEEEECTTSHH
T ss_pred chHHHHHHHHHHHHhC-CCC---------cEEEeCCccHHHHHHHHHhcCC-----------------CCEEEEcCccch
Confidence 4567888889999998 421 3699999999998887764321 1234443333 4
Q ss_pred hHHHH--HHhc--cCCeEEeeCCCCccChhhHHH-HHhhhchh-hcCCceEEEEEecCCCCCcc---ccCHHHHHHHHhh
Q psy9807 207 ELEVV--MLDW--LGKMLDLPKEFLACSGGKGGG-VIQRKSDR-EMCSDLLQVVATLGTTNCCA---FDCLEEIGQVCRQ 277 (561)
Q Consensus 207 s~~ka--a~~~--g~~v~~v~~~~g~~d~~~Le~-~i~~~~~~-~~g~~p~~vv~t~gtt~tG~---idpl~eI~~ia~~ 277 (561)
+...+ +... |.+++.+|.+++.+|+++|++ +|++ .. ..+.++.+|+++.. +++|. .+++++|+++|++
T Consensus 95 ~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~i~~--~~~~~~~~~~~v~~~~~-~~tG~~~~~~~l~~i~~~~~~ 171 (356)
T 1v72_A 95 NNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREK--VGDVHTTQPACVSITQA-TEVGSIYTLDEIEAIGDVCKS 171 (356)
T ss_dssp HHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSS--TTCTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHH
T ss_pred hhhhchHHHHHhCCcEEEEecCCCCeEcHHHHHHHhhhc--chhhccCCceEEEEEcC-CCCCccCCHHHHHHHHHHHHH
Confidence 44444 5544 888888888557899999999 8865 21 12335777877774 46999 7789999999999
Q ss_pred cCceEEechhcccccccCccccccccCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAP 356 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (561)
||+|+|+|++|+.+............++ ..+|++++++||+ +.|.|+|+++. ++........ +.... +..
T Consensus 172 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~-~~~~~~~~~~-----~~~~~-~~~- 242 (356)
T 1v72_A 172 SSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLF-NTSLATEMSY-----RRKRA-GHL- 242 (356)
T ss_dssp TTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEES-SGGGHHHHHH-----HHHHT-TCC-
T ss_pred cCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEE-CHHHHhhHHH-----Hhhcc-Cch-
Confidence 9999999999875422111111111112 2569999999999 67988888887 4333322110 00000 000
Q ss_pred CCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCcccccccc
Q psy9807 357 DYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRF 436 (561)
Q Consensus 357 ~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~ 436 (561)
. ..........++.+....+.++.++..++++++.+.|++++++++..++..+.+.++
T Consensus 243 ---------~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~------------ 300 (356)
T 1v72_A 243 ---------S-SKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCR------------ 300 (356)
T ss_dssp ---------C-SSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEE------------
T ss_pred ---------h-hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEE------------
Confidence 0 001122222344444445667788889999999999999889988766555554332
Q ss_pred chhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEe
Q psy9807 437 RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVP 516 (561)
Q Consensus 437 ~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~ 516 (561)
+. .++.++|.+.|..+..+
T Consensus 301 -------------------------------------------------------~~------~~~~~~l~~~gi~v~~g 319 (356)
T 1v72_A 301 -------------------------------------------------------LD------SAMIDALLKAGFGFYHD 319 (356)
T ss_dssp -------------------------------------------------------EC------HHHHHHHHHTTCBCBCS
T ss_pred -------------------------------------------------------cC------HHHHHHHHhcCeEEecc
Confidence 11 25677777777554322
Q ss_pred eeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 517 SKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 517 ~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
. .. ..++|+++ ++.++++|++++++.|+++.++.
T Consensus 320 ~-~~-~~~iRi~~-~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 320 R-WG-PNVVRFVT-SFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp S-SS-TTEEEEEC-CTTCCHHHHHHHHHHHHHTC---
T ss_pred c-cC-CCeEEEEe-cCCCCHHHHHHHHHHHHHHHHhh
Confidence 2 22 45899984 46778999999999998876543
No 46
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.89 E-value=1.4e-21 Score=204.68 Aligned_cols=341 Identities=10% Similarity=0.006 Sum_probs=212.1
Q ss_pred ccccccCCCCCChHHHHHHHHHhhcc----ccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh
Q psy9807 90 PKFHAYFPTANSYPAIVADILSDSIA----CIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 165 (561)
Q Consensus 90 p~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT 165 (561)
..|+++..+++.++.+...+ ...+. +....|..++.......++.+++++++|.+++ ..+||+|||
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t 96 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTV-STAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPG---------GVVLGADRA 96 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHH-HHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGG---------GEEEESCHH
T ss_pred eEEEeCCCcCCCCHHHHHHH-HHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEeCChH
Confidence 45777765555555554333 22222 11223444444567788899999999999754 579999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHH----HhccCCeEEeeC--CCCccChhhHHHHH
Q psy9807 166 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVM----LDWLGKMLDLPK--EFLACSGGKGGGVI 238 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa----~~~g~~v~~v~~--~~g~~d~~~Le~~i 238 (561)
+++..++.+.... . .+ ++++++.... .+...+. ...|.+++.+|. +++.+|+++|+++|
T Consensus 97 ~al~~~~~~l~~~-~------~~-------gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l 162 (406)
T 3cai_A 97 VLLSLLAEASSSR-A------GL-------GYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLI 162 (406)
T ss_dssp HHHHHHHHHTGGG-G------BT-------TCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHC
T ss_pred HHHHHHHHHHhhc-c------CC-------CCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHh
Confidence 9876665442100 0 00 1244444433 3433333 336889999998 57889999999999
Q ss_pred hhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcc
Q psy9807 239 QRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKW 318 (561)
Q Consensus 239 ~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~ 318 (561)
.+ .+.+|+++..++.||.+.|+++|.++|++||+++++|+||+.+....+ .. .. .+|+++.++||+
T Consensus 163 ~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~----~~-~~d~~~~s~~K~ 228 (406)
T 3cai_A 163 SK--------STRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLD-IR----ET-DADVVTVNAHAW 228 (406)
T ss_dssp CT--------TEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCC-HH----HH-CCSEEEEEGGGG
T ss_pred CC--------CceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCC-ch----hc-CCCEEEeehhhh
Confidence 76 577899999999999999999999999999999999999985433221 11 11 359999999998
Q ss_pred ccccccce-eEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcch-HHHHHHHHHhhH-------------
Q psy9807 319 MLVTFDCS-AMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRS-LKLWFVLRLLGV------------- 383 (561)
Q Consensus 319 l~~P~g~g-~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~a-l~lw~~l~~~g~------------- 383 (561)
++ |. +| ++++++ .... .+.....+.. +.. ...+. .++....+ ..+..+++.+..
T Consensus 229 ~g-~~-~G~~~~~~~-~~~~-~l~~~~~~~~----~~~--~~~~~-~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 297 (406)
T 3cai_A 229 GG-PP-IGAMVFRDP-SVMN-SFGSVSTNPY----ATG--PARLE-IGVHQFGLLAGVVASIEYLAALDESARGSRRERL 297 (406)
T ss_dssp TS-CS-CEEEEESCH-HHHH-TSCCCCSCTT----CCG--GGGGC-CSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHH
T ss_pred cC-CC-cCeEEEEeh-HHHh-hcCCcccCCC----CCc--ccccc-CCCccHHHHHHHHHHHHHHHHhccccccchhhhh
Confidence 75 65 78 777754 3332 2211110100 000 00000 11111111 122334443322
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc--cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHH
Q psy9807 384 -KYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV--LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQ 460 (561)
Q Consensus 384 -~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~ 460 (561)
.+++++.++..++++++.+.|+++|+++++.+. ..++++|++.
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 343 (406)
T 3cai_A 298 AVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVH---------------------------------- 343 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEET----------------------------------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEEC----------------------------------
Confidence 147888899999999999999999899887543 2344444332
Q ss_pred HHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee--------eE-CCEEEEEEEecC
Q psy9807 461 ISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS--------KI-RDVYFLRMAVCS 531 (561)
Q Consensus 461 ~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~--------~~-~g~~~lR~~~~~ 531 (561)
+.+ ..++.+.|.+.|.....+. .. .+..++|+++.
T Consensus 344 ---------------------------------~~~--~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~- 387 (406)
T 3cai_A 344 ---------------------------------KVP--ADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLA- 387 (406)
T ss_dssp ---------------------------------TBC--HHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECC-
T ss_pred ---------------------------------CcC--HHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEee-
Confidence 111 3467777777764443222 00 12468999976
Q ss_pred CCCCHHHHHHHHHHHHHH
Q psy9807 532 RYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 532 ~~t~~~di~~l~~~l~~~ 549 (561)
..++++|+++++++|+++
T Consensus 388 ~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 388 HYSTMAEVDQLVRALASL 405 (406)
T ss_dssp TTCCHHHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHHHHh
Confidence 466889999999998753
No 47
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.89 E-value=1.3e-21 Score=201.39 Aligned_cols=312 Identities=11% Similarity=0.043 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c-
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T- 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~- 206 (561)
....++.+++++++|.+.+. ...+||+|||+|+..++.+++.. ++++++.... +
T Consensus 37 ~~~~~l~~~la~~~g~~~~~-------~~v~~~~g~t~a~~~~~~~~~~~-----------------gd~vi~~~~~~~~ 92 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGY-------TSVLLQGSGSYAVEAVLGSALGP-----------------QDKVLIVSNGAYG 92 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSE-------EEEEEESCHHHHHHHHHHHSCCT-----------------TCCEEEEESSHHH
T ss_pred HHHHHHHHHHHHHhCCCCcC-------cEEEEecChHHHHHHHHHHhcCC-----------------CCeEEEEeCCCcc
Confidence 45667777888888843210 14799999999998887764311 1244444323 2
Q ss_pred h-HHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEe
Q psy9807 207 E-LEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHV 284 (561)
Q Consensus 207 s-~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhV 284 (561)
+ +..++...|.+++.+|. .++.+|+++|+++|++ .. .+.+|+.+..++.+|.+.|+++|.++|++||+++++
T Consensus 93 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 166 (366)
T 1m32_A 93 ARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNA--DP----TISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIV 166 (366)
T ss_dssp HHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHH--CT----TCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhc--CC----CeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEE
Confidence 3 45666778899999999 7888999999999976 21 356777888889999999999999999999999999
Q ss_pred chhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc-CCCccccCCCCCCCCCCcc--
Q psy9807 285 DAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV-DPLYLKHDQQGSAPDYRHW-- 361 (561)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~-- 361 (561)
|++|+.+....+ +... .+|+++.++|||+++|.|+|++++++. .+. .+.. ...|..... ..+..+
T Consensus 167 Dea~~~~~~~~~-----~~~~-~~di~~~s~~K~~~~~~g~G~~~~~~~-~~~-~~~~~~~~~~~~~~----~~~~~~~~ 234 (366)
T 1m32_A 167 DAMSSFGGIPMD-----IAAL-HIDYLISSANKCIQGVPGFAFVIAREQ-KLA-ACKGHSRSLSLDLY----AQWRCMED 234 (366)
T ss_dssp ECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCSSEEEEEEEHH-HHT-TCTTCCSCSTTCHH----HHHHHHHH
T ss_pred ECCccccCcCcc-----cccc-CccEEEecCcccccCCCceEEEEECHH-HHH-hhcCCCCCccccHH----HHHhhhcc
Confidence 999985432111 1111 359999999999988999999998653 222 1211 111111000 000000
Q ss_pred --cc-cCcCC-cchHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeccc--ccc-ceeeecccCccccc
Q psy9807 362 --QI-PLGRR-FRSLKLWFVLRLLGVKY-LQEYIRKQISLAKEFEQLVRSDDRFEVIYEV--LMG-LVCFRLKHWQIPLG 433 (561)
Q Consensus 362 --~~-~~sr~-~~al~lw~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~--~~~-~v~f~~~~~~~~~~ 433 (561)
.. .++.. .....+..+++.+...| ++++.++..++++++.+.|++. +++++.++ ..+ ++.|++.+.
T Consensus 235 ~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~----- 308 (366)
T 1m32_A 235 NHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPED----- 308 (366)
T ss_dssp TTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCC-----
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCcc-----
Confidence 00 01111 11234455666655555 7889999999999999999988 77776542 233 334432110
Q ss_pred cccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEE
Q psy9807 434 RRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIH 513 (561)
Q Consensus 434 ~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~ 513 (561)
.+....++.+.|.+.|. .
T Consensus 309 -------------------------------------------------------------~~~~~~~~~~~l~~~gi-~ 326 (366)
T 1m32_A 309 -------------------------------------------------------------PQYRFSEFYRRLKEQGF-V 326 (366)
T ss_dssp -------------------------------------------------------------TTCCHHHHHHHHHHTTE-E
T ss_pred -------------------------------------------------------------CCCCHHHHHHHHHHCCE-E
Confidence 01113467888888864 4
Q ss_pred EEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 514 LVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 514 ~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
+.+....+..++|+++.. .++++|+++++++|+++.+
T Consensus 327 v~~~~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 327 IYPGKVSQSDCFRIGNIG-EVYAADITALLTAIRTAMY 363 (366)
T ss_dssp CEECCCSSSCEEEEECCS-SCCHHHHHHHHHHHHHHCT
T ss_pred EECCcCCCCCEEEEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 443332345689999764 5688999999999987653
No 48
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.89 E-value=2.1e-21 Score=201.87 Aligned_cols=314 Identities=11% Similarity=0.071 Sum_probs=206.5
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
.+.......++.+.+++++|.+++ ..++|+|||+|+..++.+.+ . .+ ++++++..
T Consensus 54 y~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~a~~~~~~~~~---~------~~-------gd~vl~~~ 108 (390)
T 1elu_A 54 NQHIQQLIAQLRQALAETFNVDPN---------TITITDNVTTGCDIVLWGLD---W------HQ-------GDEILLTD 108 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCGG---------GEEEESSHHHHHHHHHHHSC---C------CT-------TCEEEEET
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHH---------HEEEeCChHHHHHHHHhCCC---C------CC-------CCEEEEec
Confidence 343345677888889999998754 57999999999988776642 0 00 13455544
Q ss_pred cc-chH----HHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 204 AC-TEL----EVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 204 s~-~s~----~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
.. .+. ...+...|.+++.+|. +++.+|+++|+++|.+ .+.+|+++..++.+|.+.|+++|.++|
T Consensus 109 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~~~~i~~l~ 180 (390)
T 1elu_A 109 CEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP--------KTRLVILSHLLWNTGQVLPLAEIMAVC 180 (390)
T ss_dssp TCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT--------TEEEEEEESBCTTTCCBCCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC--------CceEEEEeccccCCceecCHHHHHHHH
Confidence 44 333 3335667889999988 4778999999998866 577888999999999999999999999
Q ss_pred h----hcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCC
Q psy9807 276 R----QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 276 ~----~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
+ +||+++++|++|+.+....+ +.. ...|+++.++|||+++|.++|++++++. .+.........+-....
T Consensus 181 ~~~~~~~~~~li~Dea~~~g~~~~~-----~~~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~~~~~~~g~~~~~~ 253 (390)
T 1elu_A 181 RRHQGNYPVRVLVDGAQSAGSLPLD-----FSR-LEVDYYAFTGHKWFAGPAGVGGLYIHGD-CLGEINPTYVGWRSITY 253 (390)
T ss_dssp HHCCSSSCCEEEEECTTTBTTBCCC-----TTT-SCCSEEEEESSSTTCCCTTCEEEEECTT-TGGGCCCCSCCTTTEEE
T ss_pred hhhhhhcCcEEEEEcccccCCcCCC-----hhh-cCCCEEEccccccccCCCceEEEEECHH-hHhhcCCccccCCcccc
Confidence 9 99999999999985432111 111 1359999999999999999999999753 22211111101100000
Q ss_pred CCCCC--CCCc--cccc-CcCC-cchHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecc--cccccee
Q psy9807 352 QGSAP--DYRH--WQIP-LGRR-FRSLKLWFVLRLLGVKY-LQEYIRKQISLAKEFEQLVRSDDRFEVIYE--VLMGLVC 422 (561)
Q Consensus 352 ~~~~~--~~~~--~~~~-~sr~-~~al~lw~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~g~~l~~~--~~~~~v~ 422 (561)
..... .+.. .... ++.. .....+..+++.+...+ ++++.++..++++++.+.|+++|+++++.+ ...++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 333 (390)
T 1elu_A 254 GAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVS 333 (390)
T ss_dssp CTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEE
T ss_pred cccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEE
Confidence 00000 0000 0001 1111 11233456666665555 888999999999999999999889988753 2455555
Q ss_pred eecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHH
Q psy9807 423 FRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKL 502 (561)
Q Consensus 423 f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l 502 (561)
|++.+ +.+ ..++
T Consensus 334 ~~~~~------------------------------------------------------------------~~~--~~~~ 345 (390)
T 1elu_A 334 FTVDS------------------------------------------------------------------PLG--HRAI 345 (390)
T ss_dssp EEECS------------------------------------------------------------------SSC--HHHH
T ss_pred EEcCC------------------------------------------------------------------CCC--HHHH
Confidence 53311 111 3467
Q ss_pred HHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 503 LKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 503 ~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
.+.|.+.|.....+. +..++|+++. ..++++|+++++++|+++
T Consensus 346 ~~~l~~~gi~v~~~~---~~~~iRis~~-~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 346 VQKLEEQRIYLRTIA---DPDCIRACCH-YITDEEEINHLLARLADF 388 (390)
T ss_dssp HHHHHHTTEECEEET---TTTEEEEECC-TTCCHHHHHHHHHHHTTC
T ss_pred HHHHHHCCEEEEecC---CCCeEEEecc-cCCCHHHHHHHHHHHHhh
Confidence 888887775443332 3458999964 566889999999988754
No 49
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.88 E-value=1e-20 Score=198.85 Aligned_cols=308 Identities=12% Similarity=0.051 Sum_probs=198.4
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc-c-c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA-C-T 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s-~-~ 206 (561)
....++.+++++++|.+++ ..+||+|||+++..++.+++..... . .+ ++++++... . .
T Consensus 71 ~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~al~~al~~~~~~~~~--~--~~-------gd~vii~~~~~~~ 130 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDG---------EVVVTDTTSINLFKVLSAALRVQAT--R--SP-------ERRVIVTETSNFP 130 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTT---------SEEECSCHHHHHHHHHHHHHHHHHH--H--ST-------TCCEEEEETTSCH
T ss_pred HHHHHHHHHHHHHcCCCcc---------cEEEeCChhHHHHHHHHhhcccccc--c--CC-------CCcEEEEcCCCCC
Confidence 5666788899999998643 5789999998887777765422100 0 01 124444433 3 3
Q ss_pred hHHHH----HHhc--cCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCc
Q psy9807 207 ELEVV----MLDW--LGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDV 280 (561)
Q Consensus 207 s~~ka----a~~~--g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~ 280 (561)
+...+ +... |.+++.+|. +++|+++|.+ .+.+|+.+..++.||.+.|+++|+++|++||+
T Consensus 131 ~~~~~~~~~~~~~~~g~~~~~v~~------~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 196 (416)
T 1qz9_A 131 TDLYIAEGLADMLQQGYTLRLVDS------PEELPQAIDQ--------DTAVVMLTHVNYKTGYMHDMQALTALSHECGA 196 (416)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEESS------GGGHHHHCST--------TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHhcCCceEEEeCc------HHHHHHHhCC--------CceEEEEeccccCcccccCHHHHHHHHHHcCC
Confidence 33333 2334 788888884 8889888865 57889999999999999999999999999999
Q ss_pred eEEechhcccccccCccccccccCccccceeeecCCccccccccc-eeEEecChhhHHHhhccCCCccccCCC-CCCCCC
Q psy9807 281 WLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDC-SAMWLKDPSWVVNAFNVDPLYLKHDQQ-GSAPDY 358 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~-g~l~~r~~~~l~~~~~~~~~yl~~~~~-~~~~~~ 358 (561)
++|+|+||+.+....+ . ... .+|++++++||+++++.++ |++++++.. ..........|...... .....+
T Consensus 197 ~li~D~a~~~g~~~~~-~----~~~-~~d~~~~s~~K~l~~g~~~~g~l~~~~~~-~~~l~~~~~g~~g~~~~~~~~~~~ 269 (416)
T 1qz9_A 197 LAIWDLAHSAGAVPVD-L----HQA-GADYAIGCTYKYLNGGPGSQAFVWVSPQL-CDLVPQPLSGWFGHSRQFAMEPRY 269 (416)
T ss_dssp EEEEECTTTTTTSCCC-H----HHH-TCSEEEECSSSTTCCCTTCCCEEEECTTT-TTTSCCSCCCGGGBCTTSCCCSSC
T ss_pred EEEEEccccccCcCCC-h----hhc-CCCEEEecCcccCCCCCCCeEEEEECHHH-HhccCCCccccCccccccCCCCcc
Confidence 9999999985432211 1 111 3599999999999877787 999986642 21111111111111000 000000
Q ss_pred C----ccccc-CcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEeccc----cccceeeec
Q psy9807 359 R----HWQIP-LGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD-D--RFEVIYEV----LMGLVCFRL 425 (561)
Q Consensus 359 ~----~~~~~-~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~--g~~l~~~~----~~~~v~f~~ 425 (561)
. ..... ++.. .....++.+++.+..++++++.++..++++++.+.|++. | +++++.+. ..++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~----- 344 (416)
T 1qz9_A 270 EPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSH----- 344 (416)
T ss_dssp CBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSE-----
T ss_pred CCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCE-----
Confidence 0 00011 1111 122344566666655678889999999999999999985 6 88876543 2333
Q ss_pred ccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHH
Q psy9807 426 KHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKR 505 (561)
Q Consensus 426 ~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~ 505 (561)
++|++.+ ..++.+.
T Consensus 345 --------------------------------------------------------------~~~~~~~----~~~l~~~ 358 (416)
T 1qz9_A 345 --------------------------------------------------------------VSFEHPE----GYAVIQA 358 (416)
T ss_dssp --------------------------------------------------------------EEEECTT----HHHHHHH
T ss_pred --------------------------------------------------------------EEEecCC----HHHHHHH
Confidence 3333321 3467888
Q ss_pred HHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 506 INGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 506 L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
|.+.|.. +. ..+..++|+++.++.++++|+++++++|+++.++
T Consensus 359 l~~~gi~-~~---~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 359 LIDRGVI-GD---YREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp HHTTTEE-CE---EETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCcE-ec---cCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 8888744 32 2245589999775577999999999999988765
No 50
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.87 E-value=4.2e-21 Score=199.80 Aligned_cols=318 Identities=10% Similarity=-0.033 Sum_probs=205.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
.++.+.++.+++.+++++++|.+. ..+||+|||+||..++... . . ++++++.
T Consensus 29 ~~~~~~~~~~~~~~~l~~~~~~~~----------~v~~~~sgt~a~~~~~~~~-----~----~---------gd~vi~~ 80 (379)
T 3ke3_A 29 MSKAFQEVMNDLLSNLKTVYNAEA----------AVIIPGSGTYGMEAVARQL-----T----I---------DEDCLII 80 (379)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCSE----------EEEEESCHHHHHHHHHHHH-----C----T---------TCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCC----------EEEEcCChhHHHHHHHHhC-----C----C---------CCeEEEE
Confidence 478888999999999999999873 4688999999987765321 0 0 2355555
Q ss_pred ccc---chHHHHHHhcc--CCeEEeeC-CC---------CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC
Q psy9807 203 PAC---TELEVVMLDWL--GKMLDLPK-EF---------LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC 267 (561)
Q Consensus 203 ~s~---~s~~kaa~~~g--~~v~~v~~-~~---------g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp 267 (561)
... +.+...+...| .+++.++. .. +.+|+++|+++|++ . .+.+|++++..+.+|.+.|
T Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~--~-----~~~~v~~~~~~~~~G~~~~ 153 (379)
T 3ke3_A 81 RNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKE--D-----KSAIVYAPHVETSSGIILS 153 (379)
T ss_dssp ECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHH--H-----TCSEEEEESEETTTTEECC
T ss_pred eCCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhh--c-----CCcEEEEEeecCCCceeCC
Confidence 544 33334444444 36777776 32 36899999999964 2 3567888999999999999
Q ss_pred ---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhc-cC
Q psy9807 268 ---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFN-VD 343 (561)
Q Consensus 268 ---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~-~~ 343 (561)
+++|+++|++||+++|+|++++ +....+ +.. ..+|.+++++|||+++|.|+|++++++. .+..... ..
T Consensus 154 ~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~-----~~~-~~~d~~~~s~~K~l~~~~g~g~~~~~~~-~~~~l~~~~~ 225 (379)
T 3ke3_A 154 EEYIKALSEAVHSVGGLLVIDCIAS-GCVWLD-----MKE-LGIDVLISAPQKGWSSTPCAGLVMLSAA-AIKKVESTES 225 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTC-TTCCCC-----HHH-HTCSEEEECTTTTTCSCCCEEEEEECHH-HHHHHHTCCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEeccc-CCcccc-----ccc-cCCCEEEecchhhcCCCCceEEEEECHH-HHHhhhcCCC
Confidence 9999999999999999999987 322111 110 1359999999999999999999999654 2222221 11
Q ss_pred CCccccCCC----CCCCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc-
Q psy9807 344 PLYLKHDQQ----GSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL- 417 (561)
Q Consensus 344 ~~yl~~~~~----~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~- 417 (561)
.+|...... ............++.. .....+-.+++.+..+|++++.++..++++++++.|+++ |++++.++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~ 304 (379)
T 3ke3_A 226 NCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGF 304 (379)
T ss_dssp SCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTC
T ss_pred CceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccc
Confidence 222110000 0000000000001111 122344466677777789999999999999999999998 888765432
Q ss_pred -ccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCc
Q psy9807 418 -MGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPN 496 (561)
Q Consensus 418 -~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~ 496 (561)
.+.++ .+...+ .
T Consensus 305 ~~~~i~------------------------------------------------------------------~~~~~~-~ 317 (379)
T 3ke3_A 305 EAPGVV------------------------------------------------------------------VSYTER-D 317 (379)
T ss_dssp BCSSEE------------------------------------------------------------------EEECSC-H
T ss_pred cCceEE------------------------------------------------------------------EEccCC-c
Confidence 22221 111111 1
Q ss_pred HHHHHHHHHHHhCCcEEEEeee-----ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 497 EINEKLLKRINGNGKIHLVPSK-----IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 497 ~~~~~l~~~L~~~g~~~~~~~~-----~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
.....+.|.+.|.....+.. ..+..++|++++. +++++||++++++|+++.+++.
T Consensus 318 --~~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~-~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 318 --DMHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFG-LDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp --HHHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCS-HHHHTCHHHHHHHHHHHHHHHH
T ss_pred --chHHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCc-CCCHHHHHHHHHHHHHHHHHhc
Confidence 11225667777765433221 1235689999775 4588899999999999887654
No 51
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.87 E-value=1.2e-20 Score=196.85 Aligned_cols=298 Identities=10% Similarity=-0.001 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
.....++.+++++++|.++ .+++++||++|..++.+... + ++.+++.... .
T Consensus 87 ~~~~~~l~~~la~~~~~~~-----------~i~~~sGt~a~~~~l~~~~~----------~-------gd~v~~~~~~~~ 138 (399)
T 3tqx_A 87 QTIHKELEKDISEFLGTDD-----------TILYSSCFDANGGLFETLLG----------P-------EDAIISDELNHA 138 (399)
T ss_dssp BHHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHTTHHHHCC----------T-------TCEEEEETTCCH
T ss_pred chHHHHHHHHHHHHHCCCc-----------EEEECchHHHHHHHHHHhcC----------C-------CCEEEECCcccH
Confidence 3456667778888888763 47778889998877654311 0 1234444334 6
Q ss_pred hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech
Q psy9807 207 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 207 s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa 286 (561)
++..++...|.+++.+| .+|+++|++.+++ ....+..+.+|+.+...+.+|.+.|+++|+++|++||+++++|+
T Consensus 139 ~~~~~~~~~g~~~~~~~----~~d~~~l~~~l~~--~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De 212 (399)
T 3tqx_A 139 SIIDGIRLCKAQRYRYK----NNAMGDLEAKLKE--ADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDD 212 (399)
T ss_dssp HHHHHHHSCCSEEEEEC----TTCTTHHHHHHHH--HHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHcCCceeEeC----CCCHHHHHHHHHh--hhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEEC
Confidence 77778888899998888 4789999999987 55445568889999999999999999999999999999999999
Q ss_pred hcccccccCccccccc--cCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccc
Q psy9807 287 AYAGSAFICPENRYLM--KGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQI 363 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~--~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (561)
+|+.+. +.+...... .++ ...|+++.++||+++++.| |+++. ++..+.........|....
T Consensus 213 ~~~~~~-~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~-~~~~~~~~~~~~~~~~~~~------------- 276 (399)
T 3tqx_A 213 SHAVGF-IGENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSG-HKEIIEWLRNRSRPYLFSN------------- 276 (399)
T ss_dssp TTTTTT-SSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEE-CHHHHHHHHHHCHHHHSSC-------------
T ss_pred Cccccc-cCCCCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEc-CHHHHHHHHHhCcceeccC-------------
Confidence 997333 222211111 121 3569999999999996655 66665 4444333222222221110
Q ss_pred cCcCCcchH---HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhh
Q psy9807 364 PLGRRFRSL---KLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLK 440 (561)
Q Consensus 364 ~~sr~~~al---~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k 440 (561)
....+ .+..+++.+. ++++++.++..++.+++.+.|++. ++++. ++..+.+.+.+.
T Consensus 277 ----~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~-------------- 335 (399)
T 3tqx_A 277 ----TVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQLV-PGNHPIIPVMLG-------------- 335 (399)
T ss_dssp ----CCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSSEEEEEEE--------------
T ss_pred ----CCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeC--------------
Confidence 11222 2333333332 567888899999999999999987 77765 444455444321
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeee--
Q psy9807 441 LWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSK-- 518 (561)
Q Consensus 441 ~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-- 518 (561)
......++.++|.+.|.... +..
T Consensus 336 ------------------------------------------------------~~~~~~~~~~~l~~~gi~v~-~~~~~ 360 (399)
T 3tqx_A 336 ------------------------------------------------------DAQLATNMADHLLQEGIYVV-GFSYP 360 (399)
T ss_dssp ------------------------------------------------------CHHHHHHHHHHHHHTTEECC-EECTT
T ss_pred ------------------------------------------------------CHHHHHHHHHHHHHCCCEEe-eeCCC
Confidence 11234578888888875443 322
Q ss_pred --ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 519 --IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 519 --~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
..+..++|++++ ..++++|++++++.|+++.++
T Consensus 361 ~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 361 VVPMGKARIRVQMS-AVHTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp TSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceEEEEee-cCCCHHHHHHHHHHHHHHHHH
Confidence 345679999966 466889999999999988765
No 52
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.87 E-value=2.1e-20 Score=194.46 Aligned_cols=330 Identities=11% Similarity=0.039 Sum_probs=212.0
Q ss_pred hHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q psy9807 102 YPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQ 181 (561)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~ 181 (561)
++.+. +.+...+......|... ..++++++.+|+++.+|.+.+ ....+||+|||+++..++.+....
T Consensus 42 ~~~v~-~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~-------~~~i~~~~g~~~a~~~~~~~l~~~--- 108 (391)
T 3dzz_A 42 APEIM-ASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPK-------EDWCVFASGVVPAISAMVRQFTSP--- 108 (391)
T ss_dssp CHHHH-HHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCC-------GGGEEEESCHHHHHHHHHHHHSCT---
T ss_pred CHHHH-HHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCC-------HHHEEECCCHHHHHHHHHHHhCCC---
Confidence 34443 44444444433333333 578999999999999995421 026799999999998777664210
Q ss_pred HHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC--CCC--ccChhhHHHHHhhhchhhcCCceEEEEEe
Q psy9807 182 RVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK--EFL--ACSGGKGGGVIQRKSDREMCSDLLQVVAT 256 (561)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~--~~g--~~d~~~Le~~i~~~~~~~~g~~p~~vv~t 256 (561)
++++++.... .++..++...|.+++.+|. .++ .+|+++|+++|++ . .+.+|+++
T Consensus 109 --------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~-----~~~~v~i~ 167 (391)
T 3dzz_A 109 --------------GDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT--P-----SVRMMVFC 167 (391)
T ss_dssp --------------TCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS--T-----TEEEEEEE
T ss_pred --------------CCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc--c-----CceEEEEE
Confidence 1244444444 6777788888999999987 233 4999999999973 1 57778888
Q ss_pred cCCCCCccc---cCHHHHHHHHhhcCceEEechhcccccccCccccccccCc--cccc--eeeecCCcccc-ccccceeE
Q psy9807 257 LGTTNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV--ELAD--SFNFNPHKWML-VTFDCSAM 328 (561)
Q Consensus 257 ~gtt~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi--~~aD--si~~~~HK~l~-~P~g~g~l 328 (561)
...+.+|.+ +++++|+++|++||+++++|++|++........... ..+ +..| +++.++||+++ ....+|++
T Consensus 168 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~ 246 (391)
T 3dzz_A 168 NPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPA-FTVDWDAKNWVVSLISPSKTFNLAALHAACA 246 (391)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCG-GGSCTTTGGGEEEEECSHHHHTCTTTCCEEE
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceeh-hhcCccccCcEEEEEeChhhccccchhheEE
Confidence 889999999 889999999999999999999998654322111111 111 1246 88999999997 44568888
Q ss_pred EecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc-C
Q psy9807 329 WLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS-D 407 (561)
Q Consensus 329 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~ 407 (561)
+.+++............+. ....-......+..+++. +.+.++++.++..++++++.+.|++ +
T Consensus 247 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~ 310 (391)
T 3dzz_A 247 IIPNPDLRARAEESFFLAG---------------IGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEV 310 (391)
T ss_dssp ECCSHHHHHHHHHHHHHHT---------------CSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EECCHHHHHHHHHHHHhhc---------------cCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 8875544332211100000 000011222223333333 4566888899999999999999999 8
Q ss_pred CCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcc
Q psy9807 408 DRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 487 (561)
Q Consensus 408 ~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~ 487 (561)
|++++..+.....+.+++...
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------------- 331 (391)
T 3dzz_A 311 PEVKVLDSNASYLAWVDISAL----------------------------------------------------------- 331 (391)
T ss_dssp TTSEECCCCBSSEEEEECGGG-----------------------------------------------------------
T ss_pred CCcEEeccCceEEEEEehhhc-----------------------------------------------------------
Confidence 999877544333322322110
Q ss_pred eeeecCCCcHHHHHHHHHHH-hCCcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 488 VCFRLKGPNEINEKLLKRIN-GNGKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 488 v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+. ...++.+.|. +.|.....+... .+..++|++++ +++++++++++.|.++.++
T Consensus 332 ------~~--~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 332 ------GM--NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA---CPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp ------CS--CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC---SCHHHHHHHHHHHHHHHHT
T ss_pred ------CC--CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence 01 1346788885 666544433222 23578999966 4788999999999887654
No 53
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.86 E-value=4.2e-20 Score=195.31 Aligned_cols=289 Identities=11% Similarity=0.074 Sum_probs=180.1
Q ss_pred CccccccCCCCCChHHHHHHHHHhhcc---ccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChh
Q psy9807 89 SPKFHAYFPTANSYPAIVADILSDSIA---CIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 165 (561)
Q Consensus 89 ~p~~~~~~~~~~~~~~~~~~~l~~~~n---~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT 165 (561)
...|+++..+++.++.++..+....-+ .....|..++...++..++.+++++++|.+++ ..+||+|||
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t 88 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ---------DIIFTSGGT 88 (432)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG---------GEEEESCHH
T ss_pred CcEEeeCCccCCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC---------eEEEeCChH
Confidence 456777776555566554433322211 11223445556778889999999999998754 579999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCC-CC-cccc--cceEEeccc-chHHHHH----HhccCCeEEeeC-C-CCccChhhH
Q psy9807 166 EATLVALLGAKAKTMQRVKEAHPDW-KD-SDII--ANLIASPAC-TELEVVM----LDWLGKMLDLPK-E-FLACSGGKG 234 (561)
Q Consensus 166 ~anl~al~~ar~~~~~~~~~~~~~~-~~-~~~~--~~~vv~~s~-~s~~kaa----~~~g~~v~~v~~-~-~g~~d~~~L 234 (561)
+|+..++.+..+.+.......+..+ -. ..-. ..+++...+ .|+.++. ...|.+++.+|. . ++.+|+++|
T Consensus 89 ~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l 168 (432)
T 3a9z_A 89 ESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDI 168 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHH
T ss_pred HHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHH
Confidence 9999888876532211000011000 00 0000 123333223 5555443 346889999998 4 788999999
Q ss_pred HHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC----------ceEEechhcccccccCccccccccC
Q psy9807 235 GGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD----------VWLHVDAAYAGSAFICPENRYLMKG 304 (561)
Q Consensus 235 e~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~----------~~lhVDaA~gg~~~~~~~~~~~~~g 304 (561)
+++|.+ .+.+|+++..++.||.+.|+++|.++|++|| +|+|+|+||+.+.... ... .
T Consensus 169 ~~~i~~--------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~-~~~----~ 235 (432)
T 3a9z_A 169 LAAVRP--------TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRV-DVE----D 235 (432)
T ss_dssp HHTCCT--------TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCC-CHH----H
T ss_pred HHhccC--------CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCccc-Chh----h
Confidence 999876 5778999999999999999999999999999 9999999997543211 111 1
Q ss_pred ccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc-chHHHHHHHHHhhH
Q psy9807 305 VELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGV 383 (561)
Q Consensus 305 i~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~ 383 (561)
..+|+++.++|||++ |. +|++++++..... ...+.|... ... ..+. .++... ....+..+++.+ .
T Consensus 236 -~~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~~---~~~~~~~~~----~~~--~~~~-~~~~~~~~~~a~~aal~~~-~ 301 (432)
T 3a9z_A 236 -LGVDFLTIVGHKFYG-PR-IGALYVRGVGKLT---PLYPMLFGG----GQE--RNFR-PGTENTPMIAGLGKAADLV-S 301 (432)
T ss_dssp -HCCSEEEEEGGGTTC-CS-CEEEEETTBTTTB---CCCCSCCSS----CGG--GGTS-CSCCCHHHHHHHHHHHHHH-H
T ss_pred -cCCCEEEEehhHhcC-Cc-ceEEEEccccccC---CcCceeecC----Ccc--cccc-CCCcCHHHHHHHHHHHHHH-H
Confidence 135999999999875 76 9999997642111 111111100 000 0000 011111 112233344433 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 384 KYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 384 ~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
++++++.++..++++++.+.|++++++++.
T Consensus 302 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 331 (432)
T 3a9z_A 302 ENCETYEAHMRDIRDYLEERLEAEFGKRIH 331 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCcEE
Confidence 478899999999999999999986666543
No 54
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.86 E-value=3.3e-20 Score=191.91 Aligned_cols=238 Identities=13% Similarity=0.073 Sum_probs=151.8
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++.+.+++++|.+ ..++|+|||+|+..++.+++.. . .+ ++++++.... .+...
T Consensus 35 ~~l~~~la~~~~~~-----------~v~~~~ggt~al~~~~~~~~~~-~------~~-------gd~Vl~~~~~~~~~~~ 89 (375)
T 2fnu_A 35 LLFEEALCEFLGVK-----------HALVFNSATSALLTLYRNFSEF-S------AD-------RNEIITTPISFVATAN 89 (375)
T ss_dssp HHHHHHHHHHHTCS-----------EEEEESCHHHHHHHHHHHSSCC-C------TT-------SCEEEECSSSCTHHHH
T ss_pred HHHHHHHHHHhCCC-----------eEEEeCCHHHHHHHHHHHhccc-C------CC-------CCEEEECCCccHhHHH
Confidence 34555667777775 3699999999998887765210 0 00 1244444444 77777
Q ss_pred HHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 211 VMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
++...|.+++.+|. .++.+|+++|++++.+ .+.+|+.+.. +|.+.|+++|.++|++||+++++|++|+
T Consensus 90 ~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~ 158 (375)
T 2fnu_A 90 MLLESGYTPVFAGIKNDGNIDELALEKLINE--------RTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHA 158 (375)
T ss_dssp HHHHTTCEEEECCBCTTSSBCGGGSGGGCCT--------TEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTC
T ss_pred HHHHCCCEEEEeccCCCCCCCHHHHHhhcCc--------CceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccc
Confidence 88888999999998 6678999999998866 4555555544 8999999999999999999999999998
Q ss_pred cccccCccccccccCccccceeeecCCccccccccceeEEec-ChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC
Q psy9807 290 GSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLK-DPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR 368 (561)
Q Consensus 290 g~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r-~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~ 368 (561)
.+..... .. +.....+++.++++||+++ | |+|.++++ ++........... +-.... . ...+.. ...+.+
T Consensus 159 ~~~~~~~--~~-~~~~~~i~~~s~s~~K~~~-~-g~g~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~--~~~~~~ 228 (375)
T 2fnu_A 159 LGSEYQN--KK-VGGFALASVFSFHAIKPIT-T-AEGGAVVTNDSELHEKMKLFRS-HGMLKK-D-FFEGEV--KSIGHN 228 (375)
T ss_dssp TTCEETT--EE-TTSSSSEEEEECCTTSSSC-C-SSCEEEEESCHHHHHHHHHHTB-TTEEES-S-SSCEEE--SSCCCB
T ss_pred cCCeECC--ee-ccccCCeEEEeCCCCCCcc-c-cCceEEEeCCHHHHHHHHHHHh-cCCccc-c-cccccc--cccccc
Confidence 6543321 11 1112235777888889994 5 78988885 4433322111100 000000 0 000000 001111
Q ss_pred cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 369 FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 369 ~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
+....+..++.....++++++.++..++++++.+.|+++|++++..+
T Consensus 229 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 275 (375)
T 2fnu_A 229 FRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHP 275 (375)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCC
Confidence 12222333333334567888999999999999999999989988754
No 55
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.86 E-value=5.4e-20 Score=191.56 Aligned_cols=324 Identities=9% Similarity=0.015 Sum_probs=209.1
Q ss_pred HHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q psy9807 107 ADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEA 186 (561)
Q Consensus 107 ~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~ 186 (561)
.+.+...++.....|...+...++++.+.+|+.+.+|.+.. ....++|+|||+|+..++.+..+.
T Consensus 49 ~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~-------~~~v~~~~g~~~a~~~~~~~~~~~-------- 113 (388)
T 1j32_A 49 VEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYG-------ADNILVTNGGKQSIFNLMLAMIEP-------- 113 (388)
T ss_dssp HHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESHHHHHHHHHHHHHCCT--------
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-------hhhEEEcCCHHHHHHHHHHHhcCC--------
Confidence 34444444333334544455789999999999999886421 025789999999998877664211
Q ss_pred CCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC
Q psy9807 187 HPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC 262 (561)
Q Consensus 187 ~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t 262 (561)
++++++.... .++..++...|.+++.+|. . ++.+|+++|++++++ .+.+|+.+..++.+
T Consensus 114 ---------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~p~npt 176 (388)
T 1j32_A 114 ---------GDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP--------KTKLLVFNTPSNPT 176 (388)
T ss_dssp ---------TCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT--------TEEEEEEESSCTTT
T ss_pred ---------CCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc--------CceEEEEeCCCCCC
Confidence 1245554444 7777788888999999998 3 578999999999876 56778878888889
Q ss_pred ccc---cCHHHHHHHHhhcCceEEechhcccccccCcc---ccccccCccccceeeecCCcccccc-ccceeEEecChhh
Q psy9807 263 CAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPE---NRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSW 335 (561)
Q Consensus 263 G~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~---~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~ 335 (561)
|.+ +++++|+++|++||+++++|++|+....-... ...+.......|.+..++||+++.| ..+|+++.++. .
T Consensus 177 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~ 255 (388)
T 1j32_A 177 GMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP-L 255 (388)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHH-H
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHH-H
Confidence 998 45999999999999999999999865432111 1111111123589999999999644 22788887543 2
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
... +.....+ . +-....+..+++...+ +.+.++++.++..++.+++.+.|++.|++++.
T Consensus 256 ~~~-l~~~~~~-------~-----------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 316 (388)
T 1j32_A 256 VKA-ATKIQGH-------S-----------TSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECP 316 (388)
T ss_dssp HHH-HHHHHHT-------T-----------TCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCC
T ss_pred HHH-HHHHHhh-------c-----------ccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCccc
Confidence 222 2110000 0 0001223333333333 35567888889999999999999998888876
Q ss_pred ccccccceee-ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeec
Q psy9807 414 YEVLMGLVCF-RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL 492 (561)
Q Consensus 414 ~~~~~~~v~f-~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~ 492 (561)
.+. .+.+++ ++..
T Consensus 317 ~~~-~~~~~~~~~~~----------------------------------------------------------------- 330 (388)
T 1j32_A 317 KPD-GAFYMFPSIAK----------------------------------------------------------------- 330 (388)
T ss_dssp CCC-BTTEECCBCGG-----------------------------------------------------------------
T ss_pred CCC-eeEEEEEecCC-----------------------------------------------------------------
Confidence 443 333222 1110
Q ss_pred CCCcHHHHHHHHHHHh-CCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 493 KGPNEINEKLLKRING-NGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 493 ~~~~~~~~~l~~~L~~-~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.+.+ ..++.+.|.+ .|..+..+.......++|+++. +++++++++++.|.++.+++
T Consensus 331 ~~~~--~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 331 TGRS--SLDFCSELLDQHQVATVPGAAFGADDCIRLSYA---TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp GTCC--HHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC---SCHHHHHHHHHHHHHHHHHH
T ss_pred CCCC--HHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 0011 3467788876 5654443322222457999975 47889999999998877654
No 56
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.86 E-value=2e-21 Score=200.80 Aligned_cols=244 Identities=18% Similarity=0.118 Sum_probs=165.3
Q ss_pred HHHHHHHHHH-HHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 128 TELEVVMLDW-LGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 128 ~~lE~~~~~~-la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
.....++.++ +++++|.+ ..+||+|||+|+..++.++... ++++++....
T Consensus 52 ~~~~~~l~~~~la~~~~~~-----------~v~~~~g~t~a~~~~~~~~~~~-----------------gd~vl~~~~~~ 103 (371)
T 2e7j_A 52 TPPIHDFIHNQLPKFLGCD-----------VARVTNGAREAKFAVMHSLAKK-----------------DAWVVMDENCH 103 (371)
T ss_dssp -CCHHHHHHTHHHHHTTSS-----------EEEEESSHHHHHHHHHHHHCCT-----------------TCEEEEETTCC
T ss_pred HHHHHHHHHHHHHHHcCCC-----------EEEEeCChHHHHHHHHHHHhCC-----------------CCEEEEccCcc
Confidence 4456677788 89999876 2689999999998887765211 1244444444
Q ss_pred chHHHHHHhccCCeEEee--C-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceE
Q psy9807 206 TELEVVMLDWLGKMLDLP--K-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWL 282 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~--~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~l 282 (561)
.+...++...|.+++.+| . +++.+|+++|+++|.+ .... ..+.+|+.+..++.+|.+.|+++|.++|++||+++
T Consensus 104 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~l 180 (371)
T 2e7j_A 104 YSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEE--TKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPL 180 (371)
T ss_dssp HHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHH--HTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCE
T ss_pred hHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHh--hccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeE
Confidence 677777888899999999 7 6789999999999975 3221 25788999999999999999999999999999999
Q ss_pred EechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc-CCCccccCCCCCCCCCCcc
Q psy9807 283 HVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV-DPLYLKHDQQGSAPDYRHW 361 (561)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~ 361 (561)
++|++|+.+....+ . ... .+|+++.++|||+++|.++|++++++. .+...+.. ...+... ..+.
T Consensus 181 i~D~a~~~~~~~~~-~----~~~-~~di~~~s~sK~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~------~~~~-- 245 (371)
T 2e7j_A 181 LVNGAYAIGRMPVS-L----KEI-GADFIVGSGHKSMAASGPIGVMGMKEE-WAEIVLRRSEKYKNKE------VELL-- 245 (371)
T ss_dssp EEECTTTBTTBCCC-H----HHH-TCSEEEEEHHHHSSCCSSCEEEEECTT-TTTTTTCBCSSCTTSB------GGGT--
T ss_pred EEECccccCCCCCC-h----hhc-CCCEEEecCCcCCCCCCCcEEEEEech-hhhhhccccccCcccc------cccc--
Confidence 99999987543111 1 111 359999999999999999999999764 22110111 1111100 0000
Q ss_pred cccCcCCcc-hHHHHHHHHHhhHHHHHHHHHHH--HHHHHHHHHHHhcCCCeEEeccc--cccceeee
Q psy9807 362 QIPLGRRFR-SLKLWFVLRLLGVKYLQEYIRKQ--ISLAKEFEQLVRSDDRFEVIYEV--LMGLVCFR 424 (561)
Q Consensus 362 ~~~~sr~~~-al~lw~~l~~~g~~g~~~~~~~~--~~la~~l~~~l~~~~g~~l~~~~--~~~~v~f~ 424 (561)
.++.... ...+..+++.+.. ++.++. .++++++.+.|++. ++++..++ ..++++|+
T Consensus 246 --~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~ 306 (371)
T 2e7j_A 246 --GCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFH 306 (371)
T ss_dssp --TCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEE
T ss_pred --cCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEE
Confidence 0111111 2223334443322 566677 88999999999988 88887654 35555553
No 57
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.86 E-value=1.2e-20 Score=197.62 Aligned_cols=308 Identities=11% Similarity=0.022 Sum_probs=195.3
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE-eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc-e
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI-QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN-L 199 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~-t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~-~ 199 (561)
..+|...++.+++.+++++++|.++. ...+| |+|||+|+..++.+.. .++ .
T Consensus 71 ~~~~~~~~~~~~~~~~la~~~g~~~~--------~~i~~~t~g~t~al~~~~~~l~-------------------~~gv~ 123 (398)
T 2fyf_A 71 HRQAPVKNLVGRVRSGLAELFSLPDG--------YEVILGNGGATAFWDAAAFGLI-------------------DKRSL 123 (398)
T ss_dssp TTSHHHHHHHHHHHHHHHHHTTCCTT--------CEEEEEETCHHHHHHHHHHHTC-------------------SSCEE
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEeCCchhHHHHHHHHHhc-------------------CCCeE
Confidence 34677778888999999999999732 24677 9999999988776531 012 3
Q ss_pred EEecccc--hHHHHHHhc--cCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 200 IASPACT--ELEVVMLDW--LGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 200 vv~~s~~--s~~kaa~~~--g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
++..+.+ .+...+... |.+++.+|.+++.++..+ +.+ ++.+|+++..++.||.+.|+++|.++
T Consensus 124 ~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g~~~~~~----i~~--------~~~~v~~~~~~nptG~~~~~~~i~~~- 190 (398)
T 2fyf_A 124 HLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEPQ----TDP--------SVDVIAWAHNETSTGVAVAVRRPEGS- 190 (398)
T ss_dssp EEECSHHHHHHHHHHHHCTTSCCCEEEECCTTCCCCCC----CCT--------TCSEEEEESEETTTTEECCCCCCTTC-
T ss_pred EEeCCHHHHHHHHHHHHhCCCCceEEEecCCCCCCCcc----ccC--------CCCEEEEeCcCCCcceecchHHhhhh-
Confidence 3333333 233344444 778888888433332221 333 46788888899999999999999887
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc------CCCcccc
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV------DPLYLKH 349 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~------~~~yl~~ 349 (561)
+|+|+|+|+||+.+....+ ++.+|+++.++||+++.|.++|++++++. .+...... .+.|+..
T Consensus 191 --~~~~vivD~a~~~~~~~~~--------~~~~di~~~s~sK~~~~~gg~g~l~~~~~-~~~~l~~~~~~~~~~~~~~~~ 259 (398)
T 2fyf_A 191 --DDALVVIDATSGAGGLPVD--------IAETDAYYFAPQKNFASDGGLWLAIMSPA-ALSRIEAIAATGRWVPDFLSL 259 (398)
T ss_dssp --C-CEEEEECTTTTTTSCCC--------GGGCSEEEECTTSTTCSCSSEEEEEECHH-HHHHHHHHHHTTCCCCGGGCH
T ss_pred --cCCeEEEEeccccCCcccC--------cccCcEEEEecCcccCCCCceEEEEECHH-HHHHhhcccccCCCCCcEEeh
Confidence 8999999999985432211 22369999999999998877888888553 33221110 1223211
Q ss_pred CCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEec-cc--ccc-ceee
Q psy9807 350 DQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVKY-LQEYIRKQISLAKEFEQLVRSDDRFEVIY-EV--LMG-LVCF 423 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~g~~l~~-~~--~~~-~v~f 423 (561)
........ ..... .+.. .....+..+++.+...| ++++.++..++++++.+.|++.|+++++. ++ ..+ +++|
T Consensus 260 ~~~~~~~~-~~~~~-~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~ 337 (398)
T 2fyf_A 260 PIAVENSL-KNQTY-NTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTI 337 (398)
T ss_dssp HHHHHHHT-TTCCS-SCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEE
T ss_pred HHHhhhcc-cCCCC-CCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEE
Confidence 00000000 00000 1111 12334566676666666 89999999999999999999998998874 22 344 4444
Q ss_pred ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHH
Q psy9807 424 RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLL 503 (561)
Q Consensus 424 ~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~ 503 (561)
++.+ +. ...++.
T Consensus 338 ~~~~------------------------------------------------------------------~~--~~~~l~ 349 (398)
T 2fyf_A 338 DFVD------------------------------------------------------------------DV--DAGTVA 349 (398)
T ss_dssp EECT------------------------------------------------------------------TS--CHHHHH
T ss_pred ECCC------------------------------------------------------------------CC--CHHHHH
Confidence 3311 11 134678
Q ss_pred HHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 504 KRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 504 ~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
+.|.+.|.....+....+..++|+++.. .++++|+++++++|+++.+
T Consensus 350 ~~L~~~gI~v~~g~~~~~~~~iRis~~~-~~t~e~i~~~~~~l~~~l~ 396 (398)
T 2fyf_A 350 KILRANGIVDTEPYRKLGRNQLRVAMFP-AVEPDDVSALTECVDWVVE 396 (398)
T ss_dssp HHHHHTTCBCCSCCTTTCSSEEEEECCT-TSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEecCcccCCCCEEEEEecC-CCCHHHHHHHHHHHHHHHH
Confidence 8888887654322111234689999775 6688999999999988754
No 58
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.85 E-value=3.4e-19 Score=185.60 Aligned_cols=254 Identities=12% Similarity=0.006 Sum_probs=157.6
Q ss_pred HHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 109 ILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHP 188 (561)
Q Consensus 109 ~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~ 188 (561)
.+...++.....+..++...++++.+ ++++|.+. .+++++||+|+..++.+.+ . .+
T Consensus 22 a~~~~l~~~~~~~~~~~~~~~l~~~l----a~~~~~~~-----------~i~~~sGt~al~~~l~~l~---~------~~ 77 (388)
T 1b9h_A 22 GLVRALEQGQWWRMGGDEVNSFEREF----AAHHGAAH-----------ALAVTNGTHALELALQVMG---V------GP 77 (388)
T ss_dssp HHHHHHHTSCCBTTTCSHHHHHHHHH----HHHTTCSE-----------EEEESCHHHHHHHHHHHTT---C------CT
T ss_pred HHHHHHHcCCeeecCCHHHHHHHHHH----HHHhCCCe-----------EEEeCCHHHHHHHHHHHcC---C------CC
Confidence 33444433223444556566666654 66667652 3777778999988876641 0 00
Q ss_pred CCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc
Q psy9807 189 DWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF 265 (561)
Q Consensus 189 ~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i 265 (561)
++++++.... .+...++...|.+++.+|+ . ++.+|+++|+++|.+ .+.+|+ .++.+|.+
T Consensus 78 -------gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~--------~~~~v~---~~n~tG~~ 139 (388)
T 1b9h_A 78 -------GTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP--------RTKVIM---PVHMAGLM 139 (388)
T ss_dssp -------TCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT--------TEEEEC---CBCGGGCC
T ss_pred -------cCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc--------CceEEE---EeCCccCc
Confidence 2245554444 7777788888999999998 4 588999999999966 455555 56678999
Q ss_pred cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhh--HHHhhccC
Q psy9807 266 DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSW--VVNAFNVD 343 (561)
Q Consensus 266 dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~--l~~~~~~~ 343 (561)
.|+++|+++|++||+++|+|++|+.+...... . +..+..+++.+++.||+++++. .|+++.++... +.......
T Consensus 140 ~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~--~-~~~~~~i~~~S~s~~K~l~g~~-~G~~~~~~~~~~~~~~~~~~~ 215 (388)
T 1b9h_A 140 ADMDALAKISADTGVPLLQDAAHAHGARWQGK--R-VGELDSIATFSFQNGKLMTAGE-GGAVVFPDGETEKYETAFLRH 215 (388)
T ss_dssp CCHHHHHHHHHHHTCCBCEECTTCTTCEETTE--E-GGGSSSCEEEECCTTSSSCSSS-CEEEEECTTCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCEEEEecchhcCCccCCe--e-cccccceEEEEccCCCcccCCC-eEEEEECCHHHHHHHHHHHHH
Confidence 99999999999999999999999854433211 1 1112235788888999997754 57777665433 33221111
Q ss_pred CCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 344 PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
.+- .. .....+.......+.+...+..+..... .+.+++.+++..++++++.+.|+++|++++..
T Consensus 216 -~~~-~~--~~~~~~~~~~~g~~~~~~~~~~a~~~~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 280 (388)
T 1b9h_A 216 -SCG-RP--RDDRRYFHKIAGSNMRLNEFSASVLRAQ--LARLDEQIAVRDERWTLLSRLLGAIDGVVPQG 280 (388)
T ss_dssp -BTT-CC--TTCSSCCCCSCCCBCBCBHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECC
T ss_pred -hCC-CC--ccCccceeecccccCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccC
Confidence 000 00 0000010111111222344444443332 34466778888889999999999998998865
No 59
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.85 E-value=3.1e-20 Score=194.46 Aligned_cols=312 Identities=9% Similarity=0.049 Sum_probs=203.2
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|...+...++.+++.+++++.+|.+.+ .....+||+|||+||..++.+.... ++.++
T Consensus 74 y~~~~g~~~l~~~l~~~l~~~~g~~~~------~~~~i~~~~g~~~a~~~~~~~l~~~-----------------gd~vl 130 (407)
T 3nra_A 74 YTEYRGDLGIRDLLAPRLAAFTGAPVD------ARDGLIITPGTQGALFLAVAATVAR-----------------GDKVA 130 (407)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHTSCCC------TTTSEEEESHHHHHHHHHHHTTCCT-----------------TCEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCcEEEeCCcHHHHHHHHHHhCCC-----------------CCEEE
Confidence 444556678999999999999998521 0026799999999998776553110 22444
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC-------CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HH
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK-------EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LE 269 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~-------~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~ 269 (561)
+.... .++..+++..|.+++.+|. +++.+|+++|+++|.+ .+.+|+++...+.||.+-| ++
T Consensus 131 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~p~nptG~~~~~~~l~ 202 (407)
T 3nra_A 131 IVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA--------GARVFLFSNPNNPAGVVYSAEEIG 202 (407)
T ss_dssp EEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT--------TCCEEEEESSCTTTCCCCCHHHHH
T ss_pred EcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh--------CCcEEEEcCCCCCCCcccCHHHHH
Confidence 44444 7777888889999999987 5678999999999976 4567777888899999988 99
Q ss_pred HHHHHHhhcCceEEechhcccccccCccccccc--c-CccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCC
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLM--K-GVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPL 345 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~--~-gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~ 345 (561)
+|+++|++||+++++|++|+++........... . .....+.+..++||+++.| ..+|+++. +.............
T Consensus 203 ~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~ 281 (407)
T 3nra_A 203 QIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFG-SRAIIARMEKLQAI 281 (407)
T ss_dssp HHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEE-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEc-CHHHHHHHHHHHhh
Confidence 999999999999999999986543221111111 0 1123468889999999844 45677766 43333221111000
Q ss_pred ccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceee
Q psy9807 346 YLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 423 (561)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f 423 (561)
+.. ....+..++....+ +...++++.++..++.+++.+.|+++|++++..+.....+.+
T Consensus 282 ~~~-------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 342 (407)
T 3nra_A 282 VSL-------------------RAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFP 342 (407)
T ss_dssp HTS-------------------SSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECC
T ss_pred hcc-------------------CCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEE
Confidence 100 00112222222333 234567788888899999999999988888765543333332
Q ss_pred ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHH
Q psy9807 424 RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLL 503 (561)
Q Consensus 424 ~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~ 503 (561)
++.+ ......++.
T Consensus 343 ~~~~-------------------------------------------------------------------~~~~~~~~~ 355 (407)
T 3nra_A 343 RLPK-------------------------------------------------------------------LAVAPAEFV 355 (407)
T ss_dssp BCCC-------------------------------------------------------------------BSSCHHHHH
T ss_pred eCCC-------------------------------------------------------------------CCCCHHHHH
Confidence 2211 011134677
Q ss_pred HHHHhC-CcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 504 KRINGN-GKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 504 ~~L~~~-g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+.|.++ |.....+... .+..++|+++++ ++++|+++++.|.++.+++
T Consensus 356 ~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~---~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 356 KILRLQAGVVVTPGTEFSPHTADSVRLNFSQ---DHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp HHHHHHHCEECEEGGGTCTTCTTBEEEECCS---CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEeCchhhCCCCCCEEEEEeCC---CHHHHHHHHHHHHHHHHHh
Confidence 888654 6544332221 245689999763 7889999999998887653
No 60
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.85 E-value=1e-19 Score=191.06 Aligned_cols=319 Identities=9% Similarity=-0.023 Sum_probs=209.3
Q ss_pred HHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q psy9807 107 ADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEA 186 (561)
Q Consensus 107 ~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~ 186 (561)
.+.+ ..++.....|...+...++++.+.+|+.+.+|.+... ...++|+|||+|+..++.+...
T Consensus 62 ~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-------~~v~~~~g~t~a~~~~~~~~~~--------- 124 (409)
T 2gb3_A 62 FERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP-------ENVLVTNGGSEAILFSFAVIAN--------- 124 (409)
T ss_dssp HHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG-------GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred HHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH-------HHEEEeCCHHHHHHHHHHHhCC---------
Confidence 3444 5554433345555556899999999999988865321 2679999999999888776421
Q ss_pred CCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC
Q psy9807 187 HPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC 262 (561)
Q Consensus 187 ~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t 262 (561)
+ ++++++.... .++..++...|.+++.+|. . +..+ +++|+++|.+ .+.+|+++..++.+
T Consensus 125 -~-------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~--------~~~~v~~~~p~npt 187 (409)
T 2gb3_A 125 -P-------GDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINE--------RTKGIVLSNPCNPT 187 (409)
T ss_dssp -T-------TCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCT--------TEEEEEEESSCTTT
T ss_pred -C-------CCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCc--------CCeEEEECCCCCCC
Confidence 0 1244554444 7777788888999999998 3 3344 8999988865 56777888888889
Q ss_pred cccc---CHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHH
Q psy9807 263 CAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVN 338 (561)
Q Consensus 263 G~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~ 338 (561)
|.+- ++++|+++|++||+++++|++|+++.... .....+.++...|+++.++||+++.| ..+|++++++......
T Consensus 188 G~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~ 266 (409)
T 2gb3_A 188 GVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISH 266 (409)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCC-CCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHH
Confidence 9884 58999999999999999999998654321 11121333445699999999999744 2478888876333322
Q ss_pred hhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecc
Q psy9807 339 AFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEV-IYE 415 (561)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l-~~~ 415 (561)
.......+ + ....+..+++...+ +..+++++.++..++.+++.+.|++. ++++ ..+
T Consensus 267 l~~~~~~~---------------~-----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 325 (409)
T 2gb3_A 267 AMKLAQGR---------------L-----APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLKRFTKP 325 (409)
T ss_dssp HHHHHHHS---------------C-----CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCC
T ss_pred HHHHHhcc---------------C-----CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCC
Confidence 11100000 0 11222233333333 56778888899999999999999988 7777 433
Q ss_pred ccccceee-ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC
Q psy9807 416 VLMGLVCF-RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG 494 (561)
Q Consensus 416 ~~~~~v~f-~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~ 494 (561)
..+.++| ++. +
T Consensus 326 -~~~~~~~~~~~-------------------------------------------------------------------~ 337 (409)
T 2gb3_A 326 -SGAFYITAELP-------------------------------------------------------------------V 337 (409)
T ss_dssp -SBSSEEEEECS-------------------------------------------------------------------S
T ss_pred -CeeEEEEEEeC-------------------------------------------------------------------C
Confidence 3333222 221 1
Q ss_pred CcHHHHHHHHHHHhC------CcEEEEeeeE-----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 495 PNEINEKLLKRINGN------GKIHLVPSKI-----RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 495 ~~~~~~~l~~~L~~~------g~~~~~~~~~-----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
.+ ..++.+.|.++ |.....+... .+..++|+++. +++++++++++.|+++.+++.
T Consensus 338 ~~--~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~---~~~e~i~~~~~~l~~~l~~~~ 403 (409)
T 2gb3_A 338 ED--AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV---LEKDLLSRAIDVLMEGLKMFC 403 (409)
T ss_dssp SC--HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC---SCHHHHHHHHHHHHHHHHHHH
T ss_pred CC--HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHHhh
Confidence 11 34677888776 5443332221 23568999866 688899999999998877653
No 61
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.85 E-value=2.5e-20 Score=200.14 Aligned_cols=255 Identities=9% Similarity=-0.013 Sum_probs=157.0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|..++...++|+.+++++++++|.+.+.. ...+++++|+.+|+.++.+..+ | +++++
T Consensus 82 y~~~~~~~~le~~~~~~~a~~~g~~~~~~------~~~V~~~sGs~an~~~~~all~----------p-------GD~Vl 138 (483)
T 1rv3_A 82 YGGTEHIDELETLCQKRALQAYGLDPQCW------GVNVQPYSGSPANFAVYTALVE----------P-------HGRIM 138 (483)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTTCCTTTE------EEECCCSSHHHHHHHHHHHHTC----------T-------TCEEE
T ss_pred cCcchhHHHHHHHHHHHHHHHhCCCcccC------ceEEEECCcHHHHHHHHHHhcC----------C-------CCEEE
Confidence 44566778999999999999999974300 0125666677888776655311 1 23444
Q ss_pred Eeccc-chHH--------HHHHhcc--CCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC
Q psy9807 201 ASPAC-TELE--------VVMLDWL--GKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC 267 (561)
Q Consensus 201 v~~s~-~s~~--------kaa~~~g--~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp 267 (561)
+.... .+.. +++...| ...+.+++ +++.+|+++|++++.+ . +|.+|++ ..++.+ .+.|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~--~-----~tklIi~-~~sn~~-~~~d 209 (483)
T 1rv3_A 139 GLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARL--F-----HPKLIIA-GTSCYS-RNLD 209 (483)
T ss_dssp EECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH--H-----CCSEEEE-CCSSCC-SCCC
T ss_pred EecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhh--c-----CCcEEEE-eCCcCC-CcCC
Confidence 44332 1111 1223334 33344433 5688999999999974 2 5667777 555555 8899
Q ss_pred HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhh-HHHhhccCCCc
Q psy9807 268 LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSW-VVNAFNVDPLY 346 (561)
Q Consensus 268 l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~-l~~~~~~~~~y 346 (561)
+++|+++|++||+++++|+||+.+..........+ ..+|++++++||+|.+|.+ |++++++... +...-.....|
T Consensus 210 l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~---~~~div~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~g~~~~y 285 (483)
T 1rv3_A 210 YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF---EHCHVVTTTTHKTLRGCRA-GMIFYRRGVRSVDPKTGKEILY 285 (483)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG---GTCSEEEEESSGGGCCCSC-EEEEEECSBCC-------CCBC
T ss_pred HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCC---CCCcEEEecCcccCCCCCc-eEEEEcchhhhhccccCcchhh
Confidence 99999999999999999999885544322221112 2469999999999999998 9999986421 00000000000
Q ss_pred cccCCCCCCCCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 347 LKHDQQGSAPDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
-.... .........+++... ....+..+++.....+++++.++..++++++.+.|++. |++++.+
T Consensus 286 ~~~~~---~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 351 (483)
T 1rv3_A 286 NLESL---INSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKIVTG 351 (483)
T ss_dssp CHHHH---HHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGG
T ss_pred HHHHH---hhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccC
Confidence 00000 000000000111111 22344556666666788999999999999999999998 8988764
No 62
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.85 E-value=6.8e-20 Score=205.90 Aligned_cols=243 Identities=13% Similarity=0.051 Sum_probs=163.9
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE 209 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ 209 (561)
-.+..+.+++++|.+.. .++++|+|+||..++.+.... ++.+++.... .|+.
T Consensus 207 v~~~ee~la~l~G~d~~----------i~~~~Gtt~a~~~~i~al~~~-----------------GD~Vlv~~~~h~s~~ 259 (755)
T 2vyc_A 207 FGESEKYAARVFGADRS----------WSVVVGTSGSNRTIMQACMTD-----------------NDVVVVDRNCHKSIE 259 (755)
T ss_dssp HHHHHHHHHHHHTCSEE----------EEESSHHHHHHHHHHHHHCCT-----------------TCEEEEESSCCHHHH
T ss_pred HHHHHHHHHHHhCCCce----------EEECCcHHHHHHHHHHHhcCC-----------------CCEEEECCCchHHHH
Confidence 34556788999998642 356666678888777664211 2345554444 8888
Q ss_pred HHHHhccCCeEEeeC-CC-----Ccc-----ChhhHHHHHhhhch--hhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 210 VVMLDWLGKMLDLPK-EF-----LAC-----SGGKGGGVIQRKSD--REMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 210 kaa~~~g~~v~~v~~-~~-----g~~-----d~~~Le~~i~~~~~--~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
.++...|++++.++. .+ +.+ |+++|+++|++... .+.+..|.+++++.. |.+|.+.|+++|+++|+
T Consensus 260 ~~~~~~G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~ 338 (755)
T 2vyc_A 260 QGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLE 338 (755)
T ss_dssp HHHHHHCCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHT
T ss_pred HHHHHcCCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHH
Confidence 888888999999987 32 346 99999999975111 224556667777775 68999999999999999
Q ss_pred hcCceEEechhcccccccCccccc--cccCccccce------eeecCCccccccccceeEEecCh--hhHHHhhccCCCc
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRY--LMKGVELADS------FNFNPHKWMLVTFDCSAMWLKDP--SWVVNAFNVDPLY 346 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~--~~~gi~~aDs------i~~~~HK~l~~P~g~g~l~~r~~--~~l~~~~~~~~~y 346 (561)
+||+++|||+||+++..+.+.++. .+.+ +.+|+ ++.++||+|++|.++|++++++. ..-...+......
T Consensus 339 ~~~~~livDeA~~~~~~~~~~~~~~~~~~g-~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~ 417 (755)
T 2vyc_A 339 KTSDRLHFDEAWYGYARFNPIYADHYAMRG-EPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMM 417 (755)
T ss_dssp TTCSEEEEECTTCTTGGGCGGGTTSSSSCS-CCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHH
T ss_pred HcCCEEEEECcCchhcccCcccCCcchhcC-CcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHH
Confidence 999999999999876556554321 1122 11576 99999999999999999999765 1100011100000
Q ss_pred cccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC---------eEEeccc
Q psy9807 347 LKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR---------FEVIYEV 416 (561)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g---------~~l~~~~ 416 (561)
... +.+++ ....++-.+++.+...|.++++++..++++++++.|+++++ |+++.+.
T Consensus 418 ~~s----~sp~~----------~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~ 482 (755)
T 2vyc_A 418 HAT----TSPLY----------AICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKE 482 (755)
T ss_dssp TSC----SSCCH----------HHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCS
T ss_pred hCC----CCHHH----------HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCch
Confidence 000 00110 12233445566666666678999999999999999999888 8888754
No 63
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.85 E-value=1.4e-20 Score=195.04 Aligned_cols=236 Identities=15% Similarity=0.101 Sum_probs=154.5
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
+..++...++|+.+ ++++|.+ ..+||+|||+||..++.+++- .+ +++++
T Consensus 32 ~~~~~~~~~l~~~l----a~~~~~~-----------~~i~~~sgt~al~~~l~~l~~---------~~-------gd~Vi 80 (373)
T 3frk_A 32 FILGDEDKKFEQEF----ADYCNVN-----------YCIGCGNGLDALHLILKGYDI---------GF-------GDEVI 80 (373)
T ss_dssp CSSSHHHHHHHHHH----HHHHTSS-----------EEEEESCHHHHHHHHHHHTTC---------CT-------TCEEE
T ss_pred ccCCchHHHHHHHH----HHHhCCC-----------eEEEeCCHHHHHHHHHHHcCC---------CC-------cCEEE
Confidence 44566666666655 5556664 369999999999888776410 00 22444
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
+.... .+...++...|.+++.+|. +++.+|+++|+++|.+ .+.+|+ .++.+|.+.|+++|.++|++
T Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~v~---~~n~~G~~~~l~~i~~l~~~ 149 (373)
T 3frk_A 81 VPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITE--------KTKAII---AVHLYGQPADMDEIKRIAKK 149 (373)
T ss_dssp EETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCT--------TEEEEE---EECCTTCCCCHHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCC--------CCeEEE---EECCCcCcccHHHHHHHHHH
Confidence 44444 7788888888999999998 5789999999999876 455666 35689999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeec--CCccccccccceeEEecChhhHHHhhccCCCccccCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFN--PHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~--~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
||+++++|+||+.+..+... .. + ..+|.++++ +||+++++...|+++.++.............. ..
T Consensus 150 ~~~~li~D~a~~~g~~~~~~--~~--~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g-------~~ 217 (373)
T 3frk_A 150 YNLKLIEDAAQAHGSLYKGM--KV--G-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYG-------SE 217 (373)
T ss_dssp HTCEEEEECTTCTTCEETTE--ET--T-SSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTT-------CS
T ss_pred cCCEEEEECCcccCCEECCE--ec--c-ccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcC-------cc
Confidence 99999999999854443221 11 1 123777777 66999764556666666654332211100000 00
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
..+.. ...+..+....+..++.....++++++.++..++++++.+.|++.+ +++.
T Consensus 218 ~~~~~--~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~ 272 (373)
T 3frk_A 218 KKYHH--IYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIP 272 (373)
T ss_dssp BTTBC--CSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECC
T ss_pred cCCcc--ccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEec
Confidence 00000 0011122333445555555567788899999999999999999886 6654
No 64
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.85 E-value=3.5e-19 Score=185.47 Aligned_cols=324 Identities=10% Similarity=0.021 Sum_probs=206.2
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCC-eEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGG-GVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~-g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
+.+.+...++.....|...+...++++.+.+|+.+.+|.+.+ ... .++|+|||+|+..++.+...
T Consensus 44 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~-------~~~~v~~~~g~~~a~~~~~~~~~~------- 109 (389)
T 1gd9_A 44 IKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEAD-------PKTEIMVLLGANQAFLMGLSAFLK------- 109 (389)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC-------TTTSEEEESSTTHHHHHHHTTTCC-------
T ss_pred HHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------CCCeEEEcCChHHHHHHHHHHhCC-------
Confidence 334444444332334444445688999999999998886321 125 89999999999877655311
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
+ ++++++.... .++..+++..|.+++.+|. . ++.+|+++|++++++ .+.+|+++..++
T Consensus 110 ---~-------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~~~n 171 (389)
T 1gd9_A 110 ---D-------GEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTD--------KTRALIINSPCN 171 (389)
T ss_dssp ---T-------TCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCT--------TEEEEEEESSCT
T ss_pred ---C-------CCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCc--------CceEEEEECCCC
Confidence 0 2345555444 7777888888999999998 3 457899999999866 466777788888
Q ss_pred CCcccc---CHHHHHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCcccccc-ccceeEEecChh
Q psy9807 261 NCCAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPS 334 (561)
Q Consensus 261 ~tG~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~ 334 (561)
.||.+- ++++|+++|++||+++++|++|+++.......... +.+....|++..++||+++.| ..+|+++++ +.
T Consensus 172 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~ 250 (389)
T 1gd9_A 172 PTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAP-SW 250 (389)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECC-HH
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEEC-HH
Confidence 899886 59999999999999999999998754422111111 112235689999999998744 236888875 33
Q ss_pred hHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHH--HHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 335 WVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVK--YLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~--g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
.... +.....+.. .+ ...+..+++...+ +.. .++++.++..++++++.+.|++. ++
T Consensus 251 ~~~~-l~~~~~~~~----------------~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 310 (389)
T 1gd9_A 251 IIER-MVKFQMYNA----------------TC--PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GL 310 (389)
T ss_dssp HHHH-HHHHHTTTT----------------CS--CCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHH-HHHHHhhhc----------------cC--CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 3322 211000000 00 1122222222232 233 67888889999999999999988 77
Q ss_pred EEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 411 EVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 411 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
++..+.....+.+++.+.
T Consensus 311 ~~~~~~~~~~~~~~~~~~-------------------------------------------------------------- 328 (389)
T 1gd9_A 311 PTVKPKGAFYIFPRIRDT-------------------------------------------------------------- 328 (389)
T ss_dssp CCCCCCBTTEECCBCGGG--------------------------------------------------------------
T ss_pred eecCCCeeeEEEEeccCC--------------------------------------------------------------
Confidence 765433222222222100
Q ss_pred ecCCCcHHHHHHHHHHH-hCCcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRIN-GNGKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+.+ ..++.+.|. +.|..+..+... .+..++|+++++ ++++++++++.|.++.++
T Consensus 329 ---~~~--~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~---~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 329 ---GLT--SKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT---AYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp ---TCC--HHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS---CHHHHHHHHHHHHHHHHH
T ss_pred ---CCC--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 111 346788887 666544433221 234589999764 778999999999877543
No 65
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.85 E-value=2.5e-19 Score=187.39 Aligned_cols=300 Identities=9% Similarity=-0.008 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE 207 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s 207 (561)
....++.+.+++++|.++ .+++++||+++..++.+... + ++.+++.... .+
T Consensus 90 ~~~~~l~~~la~~~g~~~-----------~i~~~sGs~a~~~~~~~~~~----------~-------gd~v~~~~~~~~~ 141 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGMED-----------AILYSSCFDANGGLFETLLG----------A-------EDAIISDALNHAS 141 (401)
T ss_dssp HHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHTTHHHHCC----------T-------TCEEEEETTCCHH
T ss_pred HHHHHHHHHHHHHhCCCc-----------EEEeCChHHHHHHHHHHHcC----------C-------CCEEEEcchhHHH
Confidence 445566667777788862 37888899998876655311 0 1233333333 47
Q ss_pred HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechh
Q psy9807 208 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAA 287 (561)
Q Consensus 208 ~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA 287 (561)
...++...|.+++.+| .+|+++|++.|++ ....+.++.+|+.+...+.+|.+.|+++|.++|++||+++++|++
T Consensus 142 ~~~~~~~~g~~~~~~~----~~d~~~l~~~l~~--~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~ 215 (401)
T 1fc4_A 142 IIDGVRLCKAKRYRYA----NNDMQELEARLKE--AREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDS 215 (401)
T ss_dssp HHHHHHTSCSEEEEEC----TTCHHHHHHHHHH--HHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECT
T ss_pred HHHHHHHcCCceEEEC----CCCHHHHHHHHHH--hhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECc
Confidence 7777788888888888 5689999999976 433333567888888899999999999999999999999999999
Q ss_pred ccccccc--CccccccccCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccccc
Q psy9807 288 YAGSAFI--CPENRYLMKGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIP 364 (561)
Q Consensus 288 ~gg~~~~--~~~~~~~~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (561)
|+.+... ...... ..++ ...|+++.++||+++++.| |+++. +++.+.........|...
T Consensus 216 ~~~g~~~~~g~~~~~-~~~~~~~~di~~~s~sK~~~~~~g-G~~~~-~~~~~~~l~~~~~~~~~~--------------- 277 (401)
T 1fc4_A 216 HAVGFVGENGRGSHE-YCDVMGRVDIITGTLGKALGGASG-GYTAA-RKEVVEWLRQRSRPYLFS--------------- 277 (401)
T ss_dssp TTTTTSSTTSCCHHH-HTTCTTCCSEEEEESSSTTCSSSC-EEEEE-CHHHHHHHHHHCHHHHHS---------------
T ss_pred ccccccCCCCCccHH-HcCCCcCCcEEEecchhhccCCCC-EEEEc-CHHHHHHHHHhCcCceeC---------------
Confidence 9733321 111110 0122 2459999999999966665 77777 444433222211112110
Q ss_pred CcCCcchHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHH
Q psy9807 365 LGRRFRSLKLWFVLRLLGV-KYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWF 443 (561)
Q Consensus 365 ~sr~~~al~lw~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~ 443 (561)
-....+..+++...+.. ...+++.++..++++++.+.|++. ++++. +...+++.+++.
T Consensus 278 --~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~----------------- 336 (401)
T 1fc4_A 278 --NSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLG----------------- 336 (401)
T ss_dssp --CCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEE-----------------
T ss_pred --CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEEEEEcC-----------------
Confidence 01122333333333221 114677888889999999999987 77765 444445444321
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeee---EC
Q psy9807 444 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSK---IR 520 (561)
Q Consensus 444 ~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~ 520 (561)
......++.+.|.+.|........ ..
T Consensus 337 ---------------------------------------------------~~~~~~~l~~~l~~~gi~v~~~~~~~~~~ 365 (401)
T 1fc4_A 337 ---------------------------------------------------DAVVAQKFARELQKEGIYVTGFFYPVVPK 365 (401)
T ss_dssp ---------------------------------------------------CHHHHHHHHHHHHHTTEECCEECTTSSCT
T ss_pred ---------------------------------------------------ChHHHHHHHHHHHHCCcEEeeecCCCCCC
Confidence 112245678888888644332221 12
Q ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 521 DVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 521 g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+..++|+++. ..++++|+++++++|+++.+++
T Consensus 366 ~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 366 GQARIRTQMS-AAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp TCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 4568999966 4568889999999999886653
No 66
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.84 E-value=1.4e-19 Score=189.86 Aligned_cols=311 Identities=10% Similarity=0.007 Sum_probs=201.4
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|...+...++++.+.+|+.+.+|++.+. ...++|+|||+|+..++.+... + ++.+
T Consensus 73 ~y~~~~g~~~l~~~la~~l~~~~g~~~~~-------~~v~~t~g~~~al~~~~~~l~~----------~-------gd~V 128 (406)
T 1xi9_A 73 YYGDSEGLPELRKAIVEREKRKNGVDITP-------DDVRVTAAVTEALQLIFGALLD----------P-------GDEI 128 (406)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCG-------GGEEEESHHHHHHHHHHHHHCC----------T-------TCEE
T ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCH-------HHEEEcCChHHHHHHHHHHhCC----------C-------CCEE
Confidence 34444456789999999999988765321 2679999999999887766421 0 1244
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIG 272 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~ 272 (561)
++.... .++..++...|.+++.+|. . ++.+|+++|+++|++ .+.+|+++..++.+|.+-| +++|+
T Consensus 129 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--------~~~~v~i~~p~nptG~~~~~~~l~~i~ 200 (406)
T 1xi9_A 129 LVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD--------RTKAIAVINPNNPTGALYDKKTLEEIL 200 (406)
T ss_dssp EEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc--------CceEEEEECCCCCCCCCcCHHHHHHHH
Confidence 444444 6777778888999999988 3 457899999999976 4667777888889999865 99999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCc-ccc-ceeeecCCcccccc-ccceeEE--ecCh---hhHHHhhccCC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV-ELA-DSFNFNPHKWMLVT-FDCSAMW--LKDP---SWVVNAFNVDP 344 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi-~~a-Dsi~~~~HK~l~~P-~g~g~l~--~r~~---~~l~~~~~~~~ 344 (561)
++|++||+|+++|++|+++.. ..... .+..+ ... |.++.++||+++.| ..+|+++ .++. ..... +....
T Consensus 201 ~~a~~~~~~li~De~~~~~~~-~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~-l~~~~ 277 (406)
T 1xi9_A 201 NIAGEYEIPVISDEIYDLMTY-EGEHI-SPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREA-IDRLA 277 (406)
T ss_dssp HHHHHHTCCEEEECTTTTCBS-SSCCC-CHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHH-HHHHH
T ss_pred HHHHHcCCEEEEEcCcccccc-CCCCC-CHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHH-HHHHH
Confidence 999999999999999987543 21111 11112 234 67888999999733 2378888 4431 33322 21100
Q ss_pred CccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccccccee
Q psy9807 345 LYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 422 (561)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~ 422 (561)
.+. + + ...+..+++...+ +.++++++.++..++.+++.+.|++.|++++..+ ..+.++
T Consensus 278 ~~~-------------~----~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~ 337 (406)
T 1xi9_A 278 RIR-------------L----C--PNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKP-QGAFYI 337 (406)
T ss_dssp HHT-------------C----C--SCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCC-CBSSEE
T ss_pred Hhh-------------c----C--CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecC-CeeEEE
Confidence 000 0 0 0112222222222 3455788888899999999999999888887643 334433
Q ss_pred e-ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHH
Q psy9807 423 F-RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEK 501 (561)
Q Consensus 423 f-~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~ 501 (561)
| ++.+. . +. ...+
T Consensus 338 ~~~~~~~---------------------------------------------------------------~-~~--~~~~ 351 (406)
T 1xi9_A 338 FPKIEVG---------------------------------------------------------------P-WK--NDKE 351 (406)
T ss_dssp CCEECSC---------------------------------------------------------------S-CS--SHHH
T ss_pred EEecCcc---------------------------------------------------------------C-CC--CHHH
Confidence 3 22100 0 01 1346
Q ss_pred HHHHHH-hCCcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 502 LLKRIN-GNGKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 502 l~~~L~-~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
+.+.|. +.|..+..+... .+..++|+++. +++++++++++.|.++.+++.
T Consensus 352 l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~---~~~~~i~~~~~~l~~~l~~~~ 404 (406)
T 1xi9_A 352 FVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL---PPIEILEEAMDRFEKFMKERL 404 (406)
T ss_dssp HHHHHHHHHCEECEEGGGGCGGGTTBEEEECC---SCHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhCCEEEeCchhcCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHHHHh
Confidence 777776 666544333222 12458999975 688899999999998876643
No 67
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.84 E-value=1.4e-19 Score=186.57 Aligned_cols=333 Identities=11% Similarity=-0.033 Sum_probs=200.6
Q ss_pred ccccCCCCCChHHHHHHHHHhhccc--c-cc---ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCC-eEEeCCh
Q psy9807 92 FHAYFPTANSYPAIVADILSDSIAC--I-GF---TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGG-GVIQGTA 164 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~n~--~-~~---~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~-g~~t~gg 164 (561)
|+.+..+.+.++.++..+.....+. + .. ....+|...++.+++.+++++++|.+++ .. .++|+||
T Consensus 6 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--------~~~i~~t~g~ 77 (362)
T 2c0r_A 6 YNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTG--------YKVLFIQGGA 77 (362)
T ss_dssp EECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSS--------EEEEEESSHH
T ss_pred eeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEECCCc
Confidence 4444444445555555444433221 1 11 1224677777888999999999999752 02 3577999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch--HHHHHHhccCCeEEeeCC----CC-ccChhhHHH
Q psy9807 165 SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE--LEVVMLDWLGKMLDLPKE----FL-ACSGGKGGG 236 (561)
Q Consensus 165 T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s--~~kaa~~~g~~v~~v~~~----~g-~~d~~~Le~ 236 (561)
|++|..++.+... + ++++++.... ++ +...++..| +++.+|.+ .+ .+|.++++
T Consensus 78 t~a~~~~~~~l~~----------~-------gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~- 138 (362)
T 2c0r_A 78 STQFAMIPMNFLK----------E-------GQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ- 138 (362)
T ss_dssp HHHHHHHHHHHCC----------T-------TCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC-
T ss_pred hHHHHHHHHhcCC----------C-------CCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc-
Confidence 9998777665311 0 2244444333 33 345556667 99888872 22 24555543
Q ss_pred HHhhhchhhcCCceEEEEEecCCCCCccc-cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecC
Q psy9807 237 VIQRKSDREMCSDLLQVVATLGTTNCCAF-DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNP 315 (561)
Q Consensus 237 ~i~~~~~~~~g~~p~~vv~t~gtt~tG~i-dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~ 315 (561)
|.+ ++.+|++++.++.||.+ .|+++| ||+|+|||+||+.+.... .+...|+++.++
T Consensus 139 -i~~--------~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~--------~~~~~d~~~~s~ 195 (362)
T 2c0r_A 139 -LQD--------NAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPF--------DLNQFGLVYAGA 195 (362)
T ss_dssp -CCT--------TEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCC--------CGGGCSEEEEET
T ss_pred -cCC--------CcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCcc--------chhHCcEEEEec
Confidence 443 57889999899999994 899987 899999999998543211 122239999999
Q ss_pred CccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHHH
Q psy9807 316 HKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRKQ 393 (561)
Q Consensus 316 HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~~ 393 (561)
|||++ |.|+|++++++. .+.......+.|+.... . . ......++-. +....+..+++.+... +++++.++.
T Consensus 196 ~K~~g-~~G~G~l~~~~~-~~~~l~~~~~~~~~~~~-~--~--~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 268 (362)
T 2c0r_A 196 QKNLG-PSGVTVVIVRED-LVAESPKHLPTMLRYDT-Y--V--KNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQAN 268 (362)
T ss_dssp TTTTC-CSSCEEEEEEGG-GSSSCCTTSCGGGCHHH-H--H--HTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred ccccc-CcCcEEEEEcHH-HHhhccccCchHHhHHH-H--h--hccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99996 888999999653 22111111111110000 0 0 0000001111 2234455566655554 789999999
Q ss_pred HHHHHHHHHHHhcCCCe-EEeccc---cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q psy9807 394 ISLAKEFEQLVRSDDRF-EVIYEV---LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQ 469 (561)
Q Consensus 394 ~~la~~l~~~l~~~~g~-~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~ 469 (561)
.++++++.+.|++++++ ++..++ ...+++
T Consensus 269 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------- 301 (362)
T 2c0r_A 269 RKKASLIYDAIDQSGGFYRGCVDVDSRSDMNIT----------------------------------------------- 301 (362)
T ss_dssp HHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEE-----------------------------------------------
T ss_pred HHHHHHHHHHHHHcCCccccCCChHHcCCcEEE-----------------------------------------------
Confidence 99999999999998546 765322 122333
Q ss_pred HhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 470 LVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 470 ~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
|++++ .....++.+.|.+.|.+...+.. ....+|+|+++ .++++|+++++++|+++
T Consensus 302 --------------------~~~~~-~~~~~~~~~~L~~~gi~~~~g~~--~~~~iRis~~~-~~~~e~i~~l~~~l~~~ 357 (362)
T 2c0r_A 302 --------------------FRLAS-EELEKEFVKASEQEGFVGLKGHR--SVGGLRASIYN-AVPYESCEALVQFMEHF 357 (362)
T ss_dssp --------------------EECSC-HHHHHHHHHHHHHTTEESCBCCT--TTCSEEEECCT-TSCHHHHHHHHHHHHHH
T ss_pred --------------------EEcCC-cchHHHHHHHHHHCCCeeccCCC--CCCEEEEECCC-CCCHHHHHHHHHHHHHH
Confidence 33321 22345777888888764322211 12469999775 55789999999999887
Q ss_pred HHH
Q psy9807 550 TEE 552 (561)
Q Consensus 550 ~~~ 552 (561)
.++
T Consensus 358 ~~~ 360 (362)
T 2c0r_A 358 KRS 360 (362)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 68
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.84 E-value=9.9e-20 Score=188.48 Aligned_cols=251 Identities=11% Similarity=0.039 Sum_probs=162.9
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+...+... .+...+...++++ .+++++|.+ ..++++|||+|+..++.+++-.
T Consensus 21 ~~~~~~~~~~~~--~~~~~~~~~~l~~----~la~~~~~~-----------~~~~~~~gt~a~~~~~~~~~~~------- 76 (374)
T 3uwc_A 21 YLNDLREFIKTA--DFTLGAELEKFEK----RFAALHNAP-----------HAIGVGTGTDALAMSFKMLNIG------- 76 (374)
T ss_dssp HHHHHHHHHHHT--CCSSCHHHHHHHH----HHHHHTTCS-----------EEEEESCHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHHHHcC--CcccChhHHHHHH----HHHHHhCCC-----------cEEEeCCHHHHHHHHHHHcCCC-------
Confidence 445555554433 2444555555555 557777765 3699999999998777664100
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCc
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC 263 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG 263 (561)
+ ++++++.... .+...++...|.+++.+|. +++.+|+++|++++.+ .+.+|+ .++.+|
T Consensus 77 --~-------gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~---~~n~~G 136 (374)
T 3uwc_A 77 --A-------GDEVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITD--------KTKAIM---PVHYTG 136 (374)
T ss_dssp --T-------TCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCT--------TEEEEC---CBCGGG
T ss_pred --C-------CCEEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCC--------CceEEE---EeCCcC
Confidence 0 2345554444 6777788888999999999 8899999999999876 455555 566889
Q ss_pred cccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCC--ccccccccceeEEecChhhHHHhhc
Q psy9807 264 AFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPH--KWMLVTFDCSAMWLKDPSWVVNAFN 341 (561)
Q Consensus 264 ~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~H--K~l~~P~g~g~l~~r~~~~l~~~~~ 341 (561)
.+.|+++|+++|++||+++++|++|+.+..+..... + ..+|.++.++| |+++.+...|+++.++.........
T Consensus 137 ~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~----~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~ 211 (374)
T 3uwc_A 137 NIADMPALAKIAKKHNLHIVEDACQTILGRINDKFV----G-SWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRL 211 (374)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEET----T-SSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeec----c-ccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999986544322111 1 12499999988 9998744567777666544332211
Q ss_pred cCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEec
Q psy9807 342 VDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR-FEVIY 414 (561)
Q Consensus 342 ~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g-~~l~~ 414 (561)
....... ..+. ....+..+....+..++.....++++++.++..++++++.+.|++.++ +++..
T Consensus 212 ~~~~~~~-------~~~~--~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 276 (374)
T 3uwc_A 212 YRNHGLI-------NRDV--CVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPV 276 (374)
T ss_dssp HTBTTEE-------ETTE--ESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCC
T ss_pred HHhcCcc-------ccCc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEecc
Confidence 1100000 0000 000111122333444444445566788889999999999999999877 87753
No 69
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.84 E-value=8.5e-20 Score=190.43 Aligned_cols=239 Identities=13% Similarity=0.086 Sum_probs=156.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
.++...++++.+ ++++|.+ .+++++|||+|+..++.+++-. + ++++++.
T Consensus 54 ~~~~~~~l~~~l----a~~~~~~-----------~~i~~~~gt~al~~~l~~~~~~---------~-------gd~vl~~ 102 (391)
T 3dr4_A 54 VGRFIVEFEKAF----ADYCGVK-----------HAIACNNGTTALHLALVAMGIG---------P-------GDEVIVP 102 (391)
T ss_dssp CSHHHHHHHHHH----HHHHTCS-----------EEEEESSHHHHHHHHHHHHTCC---------T-------TCEEEEE
T ss_pred CChHHHHHHHHH----HHHhCCC-----------cEEEeCCHHHHHHHHHHHcCCC---------C-------cCEEEEC
Confidence 455555666655 5666664 3699999999998887765200 0 2245554
Q ss_pred ccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC
Q psy9807 203 PAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD 279 (561)
Q Consensus 203 ~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~ 279 (561)
... .+...++...|.+++.++. +++.+|+++|++++.+ .+.+|+. ++.+|.+.|+++|+++|++||
T Consensus 103 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~v~~---~n~tG~~~~~~~i~~l~~~~~ 171 (391)
T 3dr4_A 103 SLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITP--------RTKAIMP---VHLYGQICDMDPILEVARRHN 171 (391)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCT--------TEEEECC---BCGGGCCCCHHHHHHHHHHTT
T ss_pred CCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCC--------CceEEEE---ECCCCChhhHHHHHHHHHHcC
Confidence 444 7777888888999999998 5689999999999876 4555553 468899999999999999999
Q ss_pred ceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCC
Q psy9807 280 VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYR 359 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (561)
+++++|+||+.+....+.... .+..+++++++.||+++++ ..|+++.++........... .+ +...+..
T Consensus 172 ~~li~D~a~~~g~~~~~~~~~---~~~di~~~S~s~~K~l~~g-~gg~~~~~~~~~~~~~~~~~-~~------g~~~~~~ 240 (391)
T 3dr4_A 172 LLVIEDAAEAVGATYRGKKSG---SLGDCATFSFFGNAIITTG-EGGMITTNDDDLAAKMRLLR-GQ------GMDPNRR 240 (391)
T ss_dssp CEEEEECTTCTTCEETTEETT---SSSSEEEEECBTTSSSCCB-SCEEEEESCHHHHHHHHHHH-BT------TCCTTST
T ss_pred CEEEEECcccccceECCeeec---ccCCEEEEECCCCCcCCcC-CeEEEEECCHHHHHHHHHHH-hc------CCCCCCc
Confidence 999999999855444332111 1122466777789999763 45666666553332211100 00 0000000
Q ss_pred cccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 360 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 360 ~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
.+....+..+....+.+++......+++++.++..++++++.+.|++. ++++..+
T Consensus 241 ~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 295 (391)
T 3dr4_A 241 YWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTKP 295 (391)
T ss_dssp TCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECC
T ss_pred ccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCc
Confidence 001111222344455556655566778889999999999999999998 8877654
No 70
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.84 E-value=2.1e-19 Score=188.29 Aligned_cols=316 Identities=11% Similarity=0.008 Sum_probs=199.9
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|...+...++++.+.+|+.+.+|.+.+. ...++|+|||+|+..++.++... +++++
T Consensus 71 y~~~~~~~~l~~~la~~~~~~~g~~~~~-------~~v~~t~g~t~a~~~~~~~~~~~-----------------gd~vl 126 (407)
T 2zc0_A 71 YTPANGIPELREELAAFLKKYDHLEVSP-------ENIVITIGGTGALDLLGRVLIDP-----------------GDVVI 126 (407)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHSCCCCCG-------GGEEEESHHHHHHHHHHHHHCCT-----------------TCEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCCc-------ceEEEecCHHHHHHHHHHHhcCC-----------------CCEEE
Confidence 4444456899999999999888853210 25789999999998887765311 12455
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEE-EEecCCCCCccccCHH---HHHHH
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQV-VATLGTTNCCAFDCLE---EIGQV 274 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~v-v~t~gtt~tG~idpl~---eI~~i 274 (561)
+.... .++..++...|.+++.+|. .++ +|+++|+++|++ ....+..+.+| +.+...+.+|.+.|++ +|+++
T Consensus 127 ~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~--~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~ 203 (407)
T 2zc0_A 127 TENPSYINTLLAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKE--LKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEI 203 (407)
T ss_dssp EEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHH--HHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHH
T ss_pred EeCCChHHHHHHHHHcCCEEEEcccCCCC-CCHHHHHHHHHh--hhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHH
Confidence 44444 6677777888899999998 554 999999999974 32222245565 4667788899999887 99999
Q ss_pred HhhcCceEEechhcccccccCccccccccCcc--ccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVE--LADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~--~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
|++||+++++|++|+++........ .+..++ ..+.+..++||+++ |. .+|+++++ +............+
T Consensus 204 ~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~-~~~~~~~~~~~~~~----- 275 (407)
T 2zc0_A 204 ASKYDLLIIEDTAYNFMRYEGGDIV-PLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAE-GEILKKVLMQKQPI----- 275 (407)
T ss_dssp HHHHTCEEEEECTTTTSBSSCSSCC-CGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECC-HHHHHHHHHHHTTT-----
T ss_pred HHHcCCEEEEECCCcccccCCCCCC-ChhhcCCCCCEEEEcccccccC-CCcceEEEecC-HHHHHHHHHHHHhh-----
Confidence 9999999999999987543211111 111121 22467788999999 53 47888875 43332211111010
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHh--h--H-HHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeccccccceeeec
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--G--V-KYLQEYIRKQISLAKEFEQLVRS-DDRFEVIYEVLMGLVCFRL 425 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g--~-~g~~~~~~~~~~la~~l~~~l~~-~~g~~l~~~~~~~~v~f~~ 425 (561)
+ .....+..+++...+ + . ..++++.++..++.+++.+.|++ .|++++..+.....+.+++
T Consensus 276 ----------~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 341 (407)
T 2zc0_A 276 ----------D----FCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFL 341 (407)
T ss_dssp ----------T----SSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEEC
T ss_pred ----------c----CCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEc
Confidence 0 001122222222222 1 2 44666777788889999999987 5777765444333434433
Q ss_pred ccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHH
Q psy9807 426 KHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKR 505 (561)
Q Consensus 426 ~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~ 505 (561)
.+ +.+ ..++.+.
T Consensus 342 ~~------------------------------------------------------------------~~~--~~~l~~~ 353 (407)
T 2zc0_A 342 PE------------------------------------------------------------------GAD--GISFANE 353 (407)
T ss_dssp ST------------------------------------------------------------------TCC--HHHHHHH
T ss_pred CC------------------------------------------------------------------CCC--HHHHHHH
Confidence 11 111 3467888
Q ss_pred HHhC-CcEEEEeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 506 INGN-GKIHLVPSKI----RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 506 L~~~-g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
|.++ |..+..+... .+..++|+++... ++++++++++.|.++.+++.+
T Consensus 354 l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~--~~~~i~~~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 354 LMEREGVVVVPGKPFYTDESGKNAIRLNFSRP--SKEEIPIGIKKLAKLYKEKFG 406 (407)
T ss_dssp HHHHTCEECBCSGGGCSSSCCTTEEEEECSSS--CTTHHHHHHHHHHHHHHHHC-
T ss_pred HHHhCCeEEECchhccCCCCCCCeEEEEeCCC--CHHHHHHHHHHHHHHHHHHhc
Confidence 8887 6444332221 1346899997754 677999999999998776543
No 71
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.84 E-value=3.1e-19 Score=198.85 Aligned_cols=246 Identities=11% Similarity=-0.037 Sum_probs=157.9
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++.+.+++++|.+.. .++++|+|+||..++.+.... ++.+++.... .|+..
T Consensus 176 ~e~e~~lA~~~gae~~----------i~v~nGtt~an~~ai~al~~p-----------------GD~VLv~~~~H~S~~~ 228 (730)
T 1c4k_A 176 VAAEKHAARVYNADKT----------YFVLGGSSNANNTVTSALVSN-----------------GDLVLFDRNNHKSVYN 228 (730)
T ss_dssp HHHHHHHHHHTTCSEE----------EEESSHHHHHHHHHHHHHCCT-----------------TCEEEEETTCCHHHHH
T ss_pred HHHHHHHHHHHCCCcE----------EEECCHHHHHHHHHHHHhcCC-----------------CCEEEEcCCchHHHHH
Confidence 4455677899998743 356666668898877764211 2344444444 78888
Q ss_pred H-HHhccCCeEEeeC--CC----CccChhhH-----HHHHhhhch-hh--cCCce-EEEEEecCCCCCccccCHHHHHHH
Q psy9807 211 V-MLDWLGKMLDLPK--EF----LACSGGKG-----GGVIQRKSD-RE--MCSDL-LQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 211 a-a~~~g~~v~~v~~--~~----g~~d~~~L-----e~~i~~~~~-~~--~g~~p-~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
+ +++.|++++.++. ++ +.+|+++| +++|.+ . .. ....| .+|+++.. |.+|.+.|+++|+++
T Consensus 229 ~~~~l~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~--~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~l 305 (730)
T 1c4k_A 229 SALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAK--VDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKR 305 (730)
T ss_dssp HHTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTT--SSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHH
T ss_pred HHHHHCCCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhc--CCcccccccCCCeEEEEECC-CCCCeecCHHHHHHH
Confidence 8 7788999888876 22 45899999 887765 3 11 01123 56777765 579999999999999
Q ss_pred HhhcCceEEechhcccccccCccccc--cccC-ccccc----eeeecCCccccccccceeEEecChhhHHHhhccCCCcc
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRY--LMKG-VELAD----SFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYL 347 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~--~~~g-i~~aD----si~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl 347 (561)
|++||+++|||+||+++..+.+..++ .+.. ...+| +++.++||+|++|.++|++++++.... ....++
T Consensus 306 a~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~-----g~~~~i 380 (730)
T 1c4k_A 306 IGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIK-----GQLRYC 380 (730)
T ss_dssp HGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGT-----TSTTCC
T ss_pred HHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhc-----Cccccc
Confidence 99999999999999876556554331 1110 11357 999999999999999999999876320 001111
Q ss_pred ccCCCCCCCCCCccccc-CcCCcc-hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeccc
Q psy9807 348 KHDQQGSAPDYRHWQIP-LGRRFR-SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS-DDRFEVIYEV 416 (561)
Q Consensus 348 ~~~~~~~~~~~~~~~~~-~sr~~~-al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~g~~l~~~~ 416 (561)
.... ...... ..+ .+.... ...+-.+++.+..++..+++++..++++++++.|++ ++|++++.+.
T Consensus 381 ~~~~---~~~~~~-~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~ 448 (730)
T 1c4k_A 381 DHKH---FNNSFN-LFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPP 448 (730)
T ss_dssp CHHH---HHHHHH-HHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCS
T ss_pred CHHH---HHHHHH-HhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEcccc
Confidence 1000 000000 000 111111 123334455555544567789999999999999998 7999997653
No 72
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.84 E-value=3.7e-19 Score=185.93 Aligned_cols=327 Identities=9% Similarity=0.007 Sum_probs=208.1
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+...++.....|... ..++++.+.+|+++.+|.+.. ....++|+|||+|+..++.+...
T Consensus 49 v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~-------~~~v~~t~g~~~a~~~~~~~l~~-------- 111 (399)
T 1c7n_A 49 LIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQ-------TDWIINTAGVVPAVFNAVREFTK-------- 111 (399)
T ss_dssp HHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCC-------GGGEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCC-------hhhEEEcCCHHHHHHHHHHHhcC--------
Confidence 3344444443222334332 678999999999998884321 02579999999999877765321
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC--CC--CccChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK--EF--LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~--~~--g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
+ ++++++.... .+...++...|.+++.+|. ++ +.+|+++|+++|++ . .+.+|+++...+
T Consensus 112 --~-------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--~-----~~~~v~~~~~~n 175 (399)
T 1c7n_A 112 --P-------GDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD--K-----NNKALLFCSPHN 175 (399)
T ss_dssp --T-------TCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC--T-----TEEEEEEESSBT
T ss_pred --C-------CCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhcc--C-----CCcEEEEcCCCC
Confidence 0 1245554444 6777777888888888887 22 35999999999973 1 466777788888
Q ss_pred CCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCc----cccceeeecCCcccccc-ccceeEEecC
Q psy9807 261 NCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV----ELADSFNFNPHKWMLVT-FDCSAMWLKD 332 (561)
Q Consensus 261 ~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi----~~aDsi~~~~HK~l~~P-~g~g~l~~r~ 332 (561)
.||.+.| +++|+++|++||+++++|++|++.......... +..+ ...+.+..++||+++.| ..+|++++++
T Consensus 176 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 254 (399)
T 1c7n_A 176 PVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN 254 (399)
T ss_dssp TTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC
T ss_pred CCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCccc-HHHcCccccCcEEEEEeChhhccccchheEEEEECC
Confidence 8999988 999999999999999999999864432211111 1111 12357788999999754 3478888876
Q ss_pred hhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Q psy9807 333 PSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRS-DDR 409 (561)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~g 409 (561)
+............+ +. + ....+..+++...+ +.+.++++.++..++.+++.+.|++ +|+
T Consensus 255 ~~~~~~l~~~~~~~---------------~~--~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 316 (399)
T 1c7n_A 255 PDIRERFTKSRDAT---------------SG--M-PFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPE 316 (399)
T ss_dssp HHHHHHHHHHHHHT---------------TC--C-CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhhc---------------cc--C-CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 54433221111111 00 0 01223333333333 3567888888899999999999998 888
Q ss_pred eEEecccccccee-eecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcce
Q psy9807 410 FEVIYEVLMGLVC-FRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 488 (561)
Q Consensus 410 ~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v 488 (561)
+++..+ ..+.+. +++.+.
T Consensus 317 ~~~~~~-~~~~~~~~~~~~~------------------------------------------------------------ 335 (399)
T 1c7n_A 317 IKAPLI-EGTYLQWIDFRAL------------------------------------------------------------ 335 (399)
T ss_dssp SBCCCC-SBSSEEEEECGGG------------------------------------------------------------
T ss_pred CeEecC-CceEEEEEEcccC------------------------------------------------------------
Confidence 876543 334432 332110
Q ss_pred eeecCCCcHHHHHHHHHHH-hCCcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 489 CFRLKGPNEINEKLLKRIN-GNGKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 489 ~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
+.+ ..++.+.|. +.|..+..+... .+..++|++++.. +++++++++.|.++.+++.+
T Consensus 336 -----~~~--~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~---~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 336 -----KMD--HKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP---SSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp -----CCC--HHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSC---HHHHHHHHHHHHHHHHHHC-
T ss_pred -----CCC--HHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccC---HHHHHHHHHHHHHHHHHHHh
Confidence 001 346788887 567655433222 1345899997753 68999999999988777643
No 73
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.84 E-value=7.1e-21 Score=202.35 Aligned_cols=288 Identities=10% Similarity=-0.035 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
.....++.+++++ +|.++ ..++|+|||+||..++.++... ++++++.... .
T Consensus 56 ~~~~~~~~~~la~-~g~~~----------~v~~~~G~t~a~~~~~~a~~~~-----------------gd~Vlv~~~~h~ 107 (446)
T 2x3l_A 56 EEVILKSMKQVEK-HSDYD----------GYFLVNGTTSGILSVIQSFSQK-----------------KGDILMARNVHK 107 (446)
T ss_dssp SSHHHHHHHHHCS-CTTEE----------EEEESSHHHHHHHHHHHTTTTS-----------------SSCEEECTTCCH
T ss_pred chHHHHHHHHHHh-cCCCc----------eEEEeCCHHHHHHHHHHHhcCC-----------------CCEEEEecCccH
Confidence 3456778889999 99863 3588999999998888765210 2345554444 7
Q ss_pred hHHHHHHhccCCeEEeeC--CC-----CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC
Q psy9807 207 ELEVVMLDWLGKMLDLPK--EF-----LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD 279 (561)
Q Consensus 207 s~~kaa~~~g~~v~~v~~--~~-----g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~ 279 (561)
+...++...|.+++.++. ++ +.+|+++| +.. .+.+|+++. +|.+|.+.|+++|+++|++||
T Consensus 108 s~~~~~~~~G~~~~~v~~~~~~~~~~~~~~d~~~l---~~~--------~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~ 175 (446)
T 2x3l_A 108 SVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRL---NND--------GHKLVVLTY-PNYYGETFNVEEVIKSLHQLN 175 (446)
T ss_dssp HHHHHHHHHTCCEEECEEEECTTTSSEEEEEC------------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCeEEEEeCeeccccCcCCCCCHHHH---cCC--------CceEEEEEC-CCCCeEecCHHHHHHHHHhcC
Confidence 888888888999998887 43 67899988 333 356777777 677999999999999999999
Q ss_pred ceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCC
Q psy9807 280 VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYR 359 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (561)
+|+|+|+||++...+.+. ....... .+|+++.++||++++|.++|++++++...-...+.....+..
T Consensus 176 ~~livDea~~~~~~f~~~-~~~~~~~-g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~~----------- 242 (446)
T 2x3l_A 176 IPVLIDEAHGAHFGLQGF-PDSTLNY-QADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSYFQ----------- 242 (446)
T ss_dssp CCEEEECTTCTTTTSTTS-CCCGGGG-TCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHHHS-----------
T ss_pred CeEEEcchhhhhhccCCC-CCChHHc-CCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHHHc-----------
Confidence 999999999973334332 1111111 369999999999999999999999765211111110000000
Q ss_pred cccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccch
Q psy9807 360 HWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRS 438 (561)
Q Consensus 360 ~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~ 438 (561)
..+... ....+..+++.+...+.+++.++..++++++++. +++++.+.....+.|++.
T Consensus 243 ----~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~------------ 301 (446)
T 2x3l_A 243 ----TSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYE------------ 301 (446)
T ss_dssp ----CSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECT------------
T ss_pred ----CCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeC------------
Confidence 011111 1223445555555555555778888888888877 677765432223333221
Q ss_pred hhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeee
Q psy9807 439 LKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSK 518 (561)
Q Consensus 439 ~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 518 (561)
+.+ ..++.+.|.++|. .+..
T Consensus 302 -------------------------------------------------------~~~--~~~l~~~L~~~GI-~v~~-- 321 (446)
T 2x3l_A 302 -------------------------------------------------------GFT--GHDIQNWFMNAHI-YLEL-- 321 (446)
T ss_dssp -------------------------------------------------------TSC--HHHHHHHHHHTTE-EESE--
T ss_pred -------------------------------------------------------CcC--HHHHHHHHHHCCC-EEEe--
Confidence 111 3467788888864 4431
Q ss_pred ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 519 IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 519 ~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.+..++|++++. .++++|+ +++++|+++.++
T Consensus 322 -~g~~~iRi~~~~-~~t~e~i-~l~~aL~~~~~~ 352 (446)
T 2x3l_A 322 -ADDYQALAILPL-WHHDDTY-LFDSLLRKIEDM 352 (446)
T ss_dssp -ECSSCEEEECCC-CCTTCCC-CHHHHHHHHHTC
T ss_pred -cCCCEEEEEeec-CCCHHHH-HHHHHHHHHHHh
Confidence 133589999764 4577789 999999887654
No 74
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.84 E-value=2.4e-19 Score=189.09 Aligned_cols=324 Identities=11% Similarity=0.030 Sum_probs=206.9
Q ss_pred HHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 108 DILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAH 187 (561)
Q Consensus 108 ~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~ 187 (561)
+.+...++.....|...+ .++++++.+|+++.+|++.. ....+||+|||+||..++.++...
T Consensus 81 ~a~~~~~~~~~~~y~~~~--~~l~~~l~~~l~~~~g~~~~-------~~~v~~~~g~~ea~~~a~~~~~~~--------- 142 (421)
T 3l8a_A 81 EAIINYGREHIFGYNYFN--DDLYQAVIDWERKEHDYAVV-------KEDILFIDGVVPAISIALQAFSEK--------- 142 (421)
T ss_dssp HHHHHHHHHCCSSCBCCC--HHHHHHHHHHHHHHHCCCCC-------GGGEEEESCHHHHHHHHHHHHSCT---------
T ss_pred HHHHHHHhcCCcCCCCCC--HHHHHHHHHHHHHHhCCCCC-------HHHEEEcCCHHHHHHHHHHHhcCC---------
Confidence 344444443333343333 78999999999999995421 126799999999998888764211
Q ss_pred CCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC----CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC
Q psy9807 188 PDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK----EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC 262 (561)
Q Consensus 188 ~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~----~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t 262 (561)
++++++.... .++..++...|.+++.+|. .++.+|+++|+++|.+ . .+.+|+++...+.+
T Consensus 143 --------gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~--~-----~~~~vil~~p~npt 207 (421)
T 3l8a_A 143 --------GDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID--N-----NVKIYLLCSPHNPG 207 (421)
T ss_dssp --------EEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH--T-----TEEEEEEESSBTTT
T ss_pred --------CCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc--c-----CCeEEEECCCCCCC
Confidence 2345555555 6677777788888888886 2346899999999974 1 56778888889999
Q ss_pred ccc---cCHHHHHHHHhhcCceEEechhcccccccCccccccc---cCccccceeeecCCcccc-ccccceeEEecChhh
Q psy9807 263 CAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLM---KGVELADSFNFNPHKWML-VTFDCSAMWLKDPSW 335 (561)
Q Consensus 263 G~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~---~gi~~aDsi~~~~HK~l~-~P~g~g~l~~r~~~~ 335 (561)
|.+ +++++|+++|++||+++++|++|++............ ......+.+..+++|+++ ....+|++++++...
T Consensus 208 G~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l 287 (421)
T 3l8a_A 208 GRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESL 287 (421)
T ss_dssp TBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHH
T ss_pred CCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHH
Confidence 998 7899999999999999999999986543221111111 111233577889999997 445678888875543
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
..........+ +....-.+....+..+++. +.+.++++.++..++.+++.+.|++.|++++..+
T Consensus 288 ~~~~~~~~~~~---------------~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~ 351 (421)
T 3l8a_A 288 RRKFQYRQLAN---------------NQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEP 351 (421)
T ss_dssp HHHHHHHHHHT---------------TCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECC
T ss_pred HHHHHHHHHhc---------------ccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCC
Confidence 32211100000 0000111122222333332 4666888889999999999999998888888755
Q ss_pred ccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC
Q psy9807 416 VLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP 495 (561)
Q Consensus 416 ~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~ 495 (561)
.....+.+++... +.
T Consensus 352 ~~~~~~~v~~~~~-----------------------------------------------------------------~~ 366 (421)
T 3l8a_A 352 EGTYLVWLDFSAY-----------------------------------------------------------------AI 366 (421)
T ss_dssp SBSSEEEEECGGG-----------------------------------------------------------------TC
T ss_pred CeeEEEEEecccc-----------------------------------------------------------------CC
Confidence 4333322322110 00
Q ss_pred cHHHHHHHHHHHhC-CcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 496 NEINEKLLKRINGN-GKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 496 ~~~~~~l~~~L~~~-g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
...++.+.|.++ |.....+... .+..++|+++. +++++|+++++.|.++.
T Consensus 367 --~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~l 419 (421)
T 3l8a_A 367 --AQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA---TPKNTVQEALSRIISVF 419 (421)
T ss_dssp --CTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHC
T ss_pred --CHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHH
Confidence 123677888755 5443332211 33568999866 47899999999998764
No 75
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.83 E-value=5.3e-19 Score=186.18 Aligned_cols=244 Identities=10% Similarity=0.021 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE 207 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s 207 (561)
++.+++.+++++++|.+. .++++|||+|+..++.+.+- .+ ++++++.... .+
T Consensus 42 ~l~~~l~~~la~~~g~~~-----------~i~~~~gt~al~~~~~~~~~---------~~-------gd~Vl~~~~~~~~ 94 (418)
T 2c81_A 42 SMERKFAKAFADFNGVPY-----------CVPTTSGSTALMLALEALGI---------GE-------GDEVIVPSLTWIA 94 (418)
T ss_dssp CHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHTTC---------CT-------TCEEEEESSSCTH
T ss_pred HHHHHHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHcCC---------CC-------cCEEEECCCccHh
Confidence 345566677788888862 58999999999888766410 00 2345555444 77
Q ss_pred HHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEec
Q psy9807 208 LEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 208 ~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVD 285 (561)
...++...|.+++.+|. . ++.+|+++|+++|.+ .+.+|+.+ +.+|.+.|+++|+++|++||+++|+|
T Consensus 95 ~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li~D 163 (418)
T 2c81_A 95 TATAVLNVNALPVFVDVEADTYCIDPQLIKSAITD--------KTKAIIPV---HLFGSMANMDEINEIAQEHNLFVIED 163 (418)
T ss_dssp HHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT--------TEEEECCB---CCTTCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC--------CCeEEEEe---CCcCCcccHHHHHHHHHHCCCEEEEE
Confidence 77888888999999998 4 789999999999866 45566553 46899999999999999999999999
Q ss_pred hhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc-CCCccccCC-CCCCCCCCc---
Q psy9807 286 AAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV-DPLYLKHDQ-QGSAPDYRH--- 360 (561)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~-~~~yl~~~~-~~~~~~~~~--- 360 (561)
+||+.+..+.. +. ...+..+++.++++||+++. ...|+++.+++......... ......... ......+..
T Consensus 164 ~a~~~~~~~~~--~~-~~~~~~~~~~s~s~~K~~~~-g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (418)
T 2c81_A 164 CAQSHGSVWNN--QR-AGTIGDIGAFSCQQGKVLTA-GEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVK 239 (418)
T ss_dssp CTTCTTCEETT--EE-TTSSSSEEEEECCTTSSSCS-SSCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEE
T ss_pred CcccccCccCC--Ee-cccccceEEEeccCCcccCC-CCeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccc
Confidence 99986643221 11 11122346777777999987 35566666555433221110 000000000 000000110
Q ss_pred --ccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q psy9807 361 --WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV 416 (561)
Q Consensus 361 --~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~ 416 (561)
..+....+...+..+.. ....++++++.++..++++++.+.|+++|++++..++
T Consensus 240 ~~~~~g~~~~~~~~~aa~~--~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 295 (418)
T 2c81_A 240 KGDIQGSNYCLSEFQSAIL--LDQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRP 295 (418)
T ss_dssp CCSSCCCBCCCCHHHHHHH--HHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCC
T ss_pred cccccCcCCCcCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCC
Confidence 00111222333332222 2234457788888899999999999999999987443
No 76
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.83 E-value=3.3e-19 Score=190.36 Aligned_cols=312 Identities=12% Similarity=0.008 Sum_probs=182.5
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...+...++|+.+++++++++|.+.... +..++++|||+||..++.+..+. ++++++
T Consensus 93 ~G~~~~~~lE~~a~~~~a~l~g~~~~~~------~~~v~~~sGt~An~~al~al~~p-----------------GD~Vl~ 149 (490)
T 2a7v_A 93 GGAEVVDEIELLCQRRALEAFDLDPAQW------GVNVQPYSGSPANLAVYTALLQP-----------------HDRIMG 149 (490)
T ss_dssp -----CTHHHHHHHHHHHHHTTCCTTTE------EEECCCSSHHHHHHHHHHHHCCS-----------------CEECCC
T ss_pred CccHHHHHHHHHHHHHHHHHcCCCcccC------ceEEeCCchHHHHHHHHHHHcCC-----------------CCEecc
Confidence 3445567999999999999999985310 01356779999998888764211 122322
Q ss_pred ecccc-------hHH--HHHHhccCCe--EEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCH
Q psy9807 202 SPACT-------ELE--VVMLDWLGKM--LDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCL 268 (561)
Q Consensus 202 ~~s~~-------s~~--kaa~~~g~~v--~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl 268 (561)
....+ ++. +.+.+.|..+ +.+++ +++.+|+++|++++.+ . +|.+|++ +.+..|...|+
T Consensus 150 ~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~--~-----~~klIi~--~~s~~~~~~dl 220 (490)
T 2a7v_A 150 LDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARL--F-----RPRLIIA--GTSAYARLIDY 220 (490)
T ss_dssp -------------------------------CCBCTTTCSBCHHHHHHHHHH--H-----CCSEEEE--CCSSCCSCCCH
T ss_pred cCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhh--c-----CCcEEEE--cCCCCCCcccH
Confidence 22111 111 1223445433 34444 4689999999999975 2 3555554 34556777899
Q ss_pred HHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChh-------------h
Q psy9807 269 EEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPS-------------W 335 (561)
Q Consensus 269 ~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~-------------~ 335 (561)
++|+++|++||+++|||+||+.+..........+ +.+|++++++||+|++|.| |+++.++.. .
T Consensus 221 ~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~---~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~ 296 (490)
T 2a7v_A 221 ARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYT 296 (490)
T ss_dssp HHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECC
T ss_pred HHHHHHHHHcCCEEEEccccccccccCCcCCCCC---CCCCEEEECCcccCccccc-hheeeccchhcccccccchhhHH
Confidence 9999999999999999999976544332222222 3569999999999999976 888876631 0
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcc-hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFR-SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~-al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
+.+.+.. +++. +.+++.... ..++..+++..-...++++.++..+++++|++.|++. |++++.
T Consensus 297 l~~~i~~---~~~~------------g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~ 360 (490)
T 2a7v_A 297 FEDRINF---AVFP------------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVS 360 (490)
T ss_dssp CHHHHHH---HHTT------------TTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGG
T ss_pred HHHHHHH---Hhcc------------cCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEec
Confidence 1111110 0000 011111111 1223334444434566888899999999999999997 999875
Q ss_pred c-ccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecC
Q psy9807 415 E-VLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLK 493 (561)
Q Consensus 415 ~-~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~ 493 (561)
+ ....++.+++++.
T Consensus 361 ~~t~t~lv~vdl~~~----------------------------------------------------------------- 375 (490)
T 2a7v_A 361 GGTDNHLVLVDLRPK----------------------------------------------------------------- 375 (490)
T ss_dssp GSCSSSEEEEECTTT-----------------------------------------------------------------
T ss_pred CCCCCeEEEEEeCCC-----------------------------------------------------------------
Confidence 3 3445544433221
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEeeeE-----CCEEEEEEEec---CCCCCHHHHHHHHHHHHHHHHH
Q psy9807 494 GPNEINEKLLKRINGNGKIHLVPSKI-----RDVYFLRMAVC---SRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 494 ~~~~~~~~l~~~L~~~g~~~~~~~~~-----~g~~~lR~~~~---~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+.+ ..++.+.|.+.|+..-..+.+ -....||++.. +...+++|++++++.|.++.+.
T Consensus 376 g~~--~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 376 GLD--GARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp TCC--HHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCC--HHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 111 235667777666443222111 12357999653 3345789999999999887754
No 77
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.83 E-value=4.4e-19 Score=185.01 Aligned_cols=317 Identities=10% Similarity=0.037 Sum_probs=204.0
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+...+......|...+...++++.+.+|+.+.+|.+-+ ....++|+|||+|+..++.+...
T Consensus 59 v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~-------~~~v~~~~g~t~al~~~~~~l~~-------- 123 (389)
T 1o4s_A 59 VVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDIS-------PDQVVVTNGAKQALFNAFMALLD-------- 123 (389)
T ss_dssp HHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCC-------GGGEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------HHHEEEecCHHHHHHHHHHHhCC--------
Confidence 344444444433334544456789999999999998887411 02679999999999887766421
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
+ ++++++.... .++..++...|.+++.+|. . ++.+|+++|++++.+ .+.+|+++..++.
T Consensus 124 --~-------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~p~np 186 (389)
T 1o4s_A 124 --P-------GDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG--------KTKAVLINSPNNP 186 (389)
T ss_dssp --T-------TCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT--------TEEEEEEESSCTT
T ss_pred --C-------CCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc--------CceEEEEcCCCCC
Confidence 0 1245554444 6777788888999999998 3 467899999999866 4667777888888
Q ss_pred CccccC---HHHHHHHHhhcCceEEechhcccccccCc--cccccccCccccceeeecCCcccccc-ccceeEEecChhh
Q psy9807 262 CCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICP--ENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSW 335 (561)
Q Consensus 262 tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~--~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~ 335 (561)
+|.+-| +++|+++|++||+++++|++|+.+....+ .... +.+....|+++.++||+++.| ..+|++++++ ..
T Consensus 187 tG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~-~~ 264 (389)
T 1o4s_A 187 TGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILD-VSEGFDRIVYINGFSKSHSMTGWRVGYLISSE-KV 264 (389)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHH-HCSSSTTEEEEEESTTTTTCGGGCCEEEECCH-HH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhh-cCCCCCcEEEEeechhhcCCcccceEEEEeCH-HH
Confidence 999866 99999999999999999999986543211 1111 111234599999999999743 2378888743 33
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
... +.....+. .-....+..+++...+.. +++++.++..++.+++.+.|++. ++++..+
T Consensus 265 ~~~-l~~~~~~~------------------~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 323 (389)
T 1o4s_A 265 ATA-VSKIQSHT------------------TSCINTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKKM-GVKFVEP 323 (389)
T ss_dssp HHH-HHHHHHHH------------------TCSCCHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCC
T ss_pred HHH-HHHHhhhc------------------ccCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc-CCeeecC
Confidence 222 21100000 000122333444444432 26777888889999999999987 7776543
Q ss_pred ccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC
Q psy9807 416 VLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP 495 (561)
Q Consensus 416 ~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~ 495 (561)
..+.+.| +.+. .
T Consensus 324 -~~~~~~~------------------------------------------------------------------~~~~-~ 335 (389)
T 1o4s_A 324 -EGAFYLF------------------------------------------------------------------FKVR-G 335 (389)
T ss_dssp -SBSSEEE------------------------------------------------------------------EECS-S
T ss_pred -CcceEEE------------------------------------------------------------------EeCC-C
Confidence 3333222 1111 0
Q ss_pred cHHHHHHHHHHH-hCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 496 NEINEKLLKRIN-GNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 496 ~~~~~~l~~~L~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+ ..++.+.|. +.|.....+.......++|+++++ ++++++++++.|.++.
T Consensus 336 ~--~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~---~~~~l~~~l~~l~~~l 386 (389)
T 1o4s_A 336 D--DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT---SIERLTEALDRIEDFL 386 (389)
T ss_dssp C--HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS---CHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC---CHHHHHHHHHHHHHHH
Confidence 1 346778886 666554433222222489999763 7789999999887764
No 78
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.83 E-value=8.5e-19 Score=182.36 Aligned_cols=321 Identities=12% Similarity=0.063 Sum_probs=203.6
Q ss_pred HHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCC--CccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHH
Q psy9807 103 PAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDL--PKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTM 180 (561)
Q Consensus 103 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~ 180 (561)
+.+. +.+...+......|.. ...++.+++.+++++.+|. +++ ..++|+|||+|+..++.+....
T Consensus 48 ~~v~-~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~---------~v~~~~g~~~a~~~~~~~~~~~-- 113 (391)
T 4dq6_A 48 PCII-DSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKSE---------WLIYSPGVIPAISLLINELTKA-- 113 (391)
T ss_dssp HHHH-HHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGG---------GEEEESCHHHHHHHHHHHHSCT--
T ss_pred HHHH-HHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHH---------HeEEcCChHHHHHHHHHHhCCC--
Confidence 4443 4444444443333433 3378999999999999994 343 6799999999998777664211
Q ss_pred HHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeCC-----CCccChhhHHHHHhhhchhhcCCceEEEE
Q psy9807 181 QRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPKE-----FLACSGGKGGGVIQRKSDREMCSDLLQVV 254 (561)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~~-----~g~~d~~~Le~~i~~~~~~~~g~~p~~vv 254 (561)
++++++.... .++..++...|.+++.+|.+ ++.+|+++|+++|++ +.+|+
T Consensus 114 ---------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---------~~~v~ 169 (391)
T 4dq6_A 114 ---------------NDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD---------VKLFI 169 (391)
T ss_dssp ---------------TCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT---------EEEEE
T ss_pred ---------------CCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc---------CCEEE
Confidence 1244444444 67777788889998888763 345899999998843 56777
Q ss_pred EecCCCCCccc---cCHHHHHHHHhhcCceEEechhcccccccCccccccccCc----cccceeeecCCcccccc-ccce
Q psy9807 255 ATLGTTNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV----ELADSFNFNPHKWMLVT-FDCS 326 (561)
Q Consensus 255 ~t~gtt~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi----~~aDsi~~~~HK~l~~P-~g~g 326 (561)
.+...+.+|.+ +++++|+++|++||+++++|++|+.......... .+..+ .....+..++||+++.| ...|
T Consensus 170 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G 248 (391)
T 4dq6_A 170 LCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHI-PMASISKEFEKNTITCMAPTKTFNIAGLQSS 248 (391)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCC-CGGGSCHHHHHTEEEEECSHHHHTCGGGCCE
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCcc-CHHHcCccccCcEEEEEechhhccCcccceE
Confidence 88888999999 7899999999999999999999986432211111 11111 11237788999999733 5678
Q ss_pred eEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHH
Q psy9807 327 AMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLV 404 (561)
Q Consensus 327 ~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l 404 (561)
+++.+++............+. .-....+...++...+ +.+.++++.++..++.+++.+.|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 310 (391)
T 4dq6_A 249 YVVLPDEKDYKLLDDAFTRID------------------IKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYI 310 (391)
T ss_dssp EEECCSHHHHHHHHHHHHHTT------------------CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHHhhc------------------CCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 887766443322111100000 0001122222222222 34557888889999999999999
Q ss_pred hc-CCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhh
Q psy9807 405 RS-DDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV 483 (561)
Q Consensus 405 ~~-~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~ 483 (561)
++ .|++++..+.....+.+++...
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------------- 335 (391)
T 4dq6_A 311 NENMPKLKVRKPEGTYLLWVDFSAL------------------------------------------------------- 335 (391)
T ss_dssp HHHCTTSEECCCSBSSEEEEECGGG-------------------------------------------------------
T ss_pred HhhCCCCEecCCCccEEEEEEhhhc-------------------------------------------------------
Confidence 88 7898887543322222322110
Q ss_pred hhcceeeecCCCcHHHHHHHHHHHhC-CcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 484 LMGLVCFRLKGPNEINEKLLKRINGN-GKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 484 ~~~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+. ...++.+.|.++ |.....+... .+..++|++++ +++++++++++.|.++.
T Consensus 336 ----------~~--~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 336 ----------GL--SDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA---CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp ----------CC--CHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC---SCHHHHHHHHHHHHHHH
T ss_pred ----------CC--CHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc---CCHHHHHHHHHHHHHHh
Confidence 01 134788888888 6544332222 23468999976 47889999999988754
No 79
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.83 E-value=1.5e-18 Score=182.24 Aligned_cols=291 Identities=10% Similarity=0.010 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
...++.+++++++|.+. .+++++||++|..++.+...+ ++.+++.... .+.
T Consensus 105 ~~~~l~~~la~~~g~~~-----------~i~~~sGt~a~~~~l~~~~~~-----------------gd~Vl~~~~~~~~~ 156 (409)
T 3kki_A 105 DKPMIEKRLAKFTGFDE-----------CLLSQSGWNANVGLLQTICQP-----------------NTNVYIDFFAHMSL 156 (409)
T ss_dssp TSCHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHCCT-----------------TCEEEEETTSCHHH
T ss_pred HHHHHHHHHHHHhCCCe-----------EEEecchHHHHHHHHHHhcCC-----------------CCEEEECCCcCHHH
Confidence 33445567777788763 478888999998877653211 1233333333 677
Q ss_pred HHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhc
Q psy9807 209 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAY 288 (561)
Q Consensus 209 ~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~ 288 (561)
..++...|.+++.++ .+|+++|+++|.+ . .+.+|+++...+.+|.+.|+++|+++|++||+|+++|++|
T Consensus 157 ~~~~~~~g~~~~~~~----~~d~~~le~~l~~--~-----~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~ 225 (409)
T 3kki_A 157 WEGARYANAQAHPFM----HNNCDHLRMLIQR--H-----GPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESH 225 (409)
T ss_dssp HHHHHHTTCEEEEEC----TTCHHHHHHHHHH--H-----CSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHcCCeEEEec----CCCHHHHHHHHHh--c-----CCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCc
Confidence 778888888888887 5789999999976 2 3567888888899999999999999999999999999999
Q ss_pred ccccccCccccccc--cCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccC
Q psy9807 289 AGSAFICPENRYLM--KGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPL 365 (561)
Q Consensus 289 gg~~~~~~~~~~~~--~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (561)
+++.+ .+...... .++ ...|+++.++||+++.+ .|+++.++ ............|... .
T Consensus 226 ~~g~~-g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~--gg~v~~~~-~~~~~~~~~~~~~~~~---------------~ 286 (409)
T 3kki_A 226 SLGTH-GPNGAGLLAELGLTREVHFMTASLAKTFAYR--AGAIWCNN-EVNRCVPFISYPAIFS---------------S 286 (409)
T ss_dssp TTTTS-SGGGCCHHHHHTCGGGCSEEEEESSSTTCSS--CEEEEESS-SGGGTHHHHCHHHHHS---------------B
T ss_pred ccccc-CCCCCcchhhcCCCCCCCEEEeecchhhCCC--ceEEEECH-HHHHHHHHhCcCcccc---------------C
Confidence 86432 22111111 122 34689999999999866 36555543 2222111111112111 0
Q ss_pred cCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHH
Q psy9807 366 GRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFV 444 (561)
Q Consensus 366 sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~ 444 (561)
+-. .....+..+++.+. ..+++.++..++.+++.+.|++. ++++. ....++.+.+.
T Consensus 287 ~~~~~~~aa~~aal~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~------------------ 343 (409)
T 3kki_A 287 TLLPYEAAGLETTLEIIE--SADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLETG------------------ 343 (409)
T ss_dssp CCCHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEE------------------
T ss_pred CCcHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeC------------------
Confidence 000 11122233333332 22567778889999999999987 66654 23333333221
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEe---eeECC
Q psy9807 445 LRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVP---SKIRD 521 (561)
Q Consensus 445 ~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~g 521 (561)
......++.+.|.+.|.+.... +...+
T Consensus 344 --------------------------------------------------~~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~ 373 (409)
T 3kki_A 344 --------------------------------------------------DERNTEKVRDYLESNGVFGSVFCRPATSKN 373 (409)
T ss_dssp --------------------------------------------------SHHHHHHHHHHHHHTTEECEEECTTSSCTT
T ss_pred --------------------------------------------------CHHHHHHHHHHHHHCCceEeeeCCCCcCCC
Confidence 1122446788888887543321 12356
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 522 VYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 522 ~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
..++|+++. ..++++||++++++|+++.+.
T Consensus 374 ~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 374 KNIIRLSLN-SDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp CEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcc-CCCCHHHHHHHHHHHHHHHhc
Confidence 789999966 466889999999999887653
No 80
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.83 E-value=1.2e-19 Score=189.86 Aligned_cols=306 Identities=11% Similarity=-0.014 Sum_probs=193.3
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|....+|+.+++++++++|.++. -+++++||+|+..++.++... ++++++.
T Consensus 63 g~~~~~~~e~~ar~~la~~~g~~~~----------~i~~~sGt~a~~~~~~~~~~~-----------------gd~Vl~~ 115 (407)
T 2dkj_A 63 GCEVIDRVESLAIERAKALFGAAWA----------NVQPHSGSQANMAVYMALMEP-----------------GDTLMGM 115 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCCT-----------------TCEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHhCCCcc----------eEEecchHHHHHHHHHHhcCC-----------------CCEEEEe
Confidence 3454457888788899999998743 366677888988877664210 1244444
Q ss_pred ccc-chH---HHHHHhccCCeEE--eeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH
Q psy9807 203 PAC-TEL---EVVMLDWLGKMLD--LPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 203 ~s~-~s~---~kaa~~~g~~v~~--v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
... .+. ..++...|..++. ++. +++.+|+++|++++++ . .+.+|++ .+...|.+.|+++|.++
T Consensus 116 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~-----~~~~v~~--~~p~~~~~~~l~~i~~l 186 (407)
T 2dkj_A 116 DLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALE--H-----RPKVIVA--GASAYPRFWDFKAFREI 186 (407)
T ss_dssp CGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHH--H-----CCSEEEE--CCSSCCSCCCHHHHHHH
T ss_pred cccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhh--c-----CCeEEEE--eccccCCCCCHHHHHHH
Confidence 333 232 2333444443333 433 3688999999999974 2 3445555 33334688899999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
|++||+++++|++|+.+......... .++.+|+++.++||+|++|.+ |+++++++............+..
T Consensus 187 ~~~~~~~li~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~~~~~------ 256 (407)
T 2dkj_A 187 ADEVGAYLVVDMAHFAGLVAAGLHPN---PLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLIFPGIQ------ 256 (407)
T ss_dssp HHHHTCEEEEECTTTHHHHHTTCSCC---CTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHTTTTC------
T ss_pred HHHcCCEEEEEccccccccccCccCC---ccccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhhccccc------
Confidence 99999999999999874443322111 122369999999999998886 88888754443322111111100
Q ss_pred CCCCCcccccCcCCcc-hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-ccccceeeecccCcccc
Q psy9807 355 APDYRHWQIPLGRRFR-SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCFRLKHWQIPL 432 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~-al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~~~v~f~~~~~~~~~ 432 (561)
.+.... ...+..+++.+...+++++.++..++++++.+.|++. +++++.+ ...+.+++++.+.
T Consensus 257 ----------~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~---- 321 (407)
T 2dkj_A 257 ----------GGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLRPK---- 321 (407)
T ss_dssp ----------SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGG----
T ss_pred ----------CCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECccc----
Confidence 011111 2234455555545688899999999999999999998 8888754 3444544433210
Q ss_pred ccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcE
Q psy9807 433 GRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKI 512 (561)
Q Consensus 433 ~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~ 512 (561)
+. ....+.+.|.+.|..
T Consensus 322 -------------------------------------------------------------~~--~~~~~~~~l~~~gi~ 338 (407)
T 2dkj_A 322 -------------------------------------------------------------GL--TGKEAEERLDAVGIT 338 (407)
T ss_dssp -------------------------------------------------------------TC--CHHHHHHHHHHTTEE
T ss_pred -------------------------------------------------------------CC--CHHHHHHHHHHcCce
Confidence 00 134677788777754
Q ss_pred EEEeee------ECCEEEEEEEecCC---CCCHHHHHHHHHHHHHHHHH
Q psy9807 513 HLVPSK------IRDVYFLRMAVCSR---YSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 513 ~~~~~~------~~g~~~lR~~~~~~---~t~~~di~~l~~~l~~~~~~ 552 (561)
...+.. .....++|++++.+ ..+++|+++++++|+++.++
T Consensus 339 v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 339 VNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp CEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred ecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 433221 11245799997643 25788999999999988766
No 81
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.83 E-value=1e-18 Score=182.67 Aligned_cols=298 Identities=9% Similarity=-0.027 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
.++.+++.+++++++|.+ ..++|+|||+|+..++.+.... ++.+++.... .
T Consensus 87 ~~~~~~l~~~la~~~g~~-----------~v~~~~ggt~a~~~~~~~~~~~-----------------gd~V~~~~p~~~ 138 (398)
T 3a2b_A 87 LDIHVELEEKLSAYVGKE-----------AAILFSTGFQSNLGPLSCLMGR-----------------NDYILLDERDHA 138 (398)
T ss_dssp CHHHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHSSCT-----------------TCEEEEETTCCH
T ss_pred cHHHHHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHHHHhCC-----------------CCEEEECCccCH
Confidence 467788889999999874 4699999999998877664210 1234444444 6
Q ss_pred hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech
Q psy9807 207 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 207 s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa 286 (561)
+...++...|.+++.+| .+|+++|++.+++ ... + .+.+|+.+...+.||.+.|+++|+++|++||+++++|+
T Consensus 139 ~~~~~~~~~g~~~~~v~----~~d~~~l~~~l~~--~~~-~-~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De 210 (398)
T 3a2b_A 139 SIIDGSRLSFSKVIKYG----HNNMEDLRAKLSR--LPE-D-SAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDD 210 (398)
T ss_dssp HHHHHHHHSSSEEEEEC----TTCHHHHHHHHHT--SCS-S-SCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHcCCceEEeC----CCCHHHHHHHHHh--hcc-C-CceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEEC
Confidence 67777788899999898 3789999999976 321 1 46778888888889999999999999999999999999
Q ss_pred hcccccccCccccccc--cCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccc
Q psy9807 287 AYAGSAFICPENRYLM--KGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQI 363 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~--~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (561)
+|+.+.. ........ .++ +++|+++.++||+++ |.| |+++.+ +..+.........|...
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~-------------- 272 (398)
T 3a2b_A 211 AHSLGVI-GHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGD-ADVIDFLKHNARSVMFS-------------- 272 (398)
T ss_dssp TTTTTTS-SGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEEC-HHHHHHHHHHCHHHHSS--------------
T ss_pred CCccccc-CCCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeC-HHHHHHHHHhcccceec--------------
Confidence 9974432 11111111 122 246999999999998 656 877774 43333221111112110
Q ss_pred cCcCCcch-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHH
Q psy9807 364 PLGRRFRS-LKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLW 442 (561)
Q Consensus 364 ~~sr~~~a-l~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w 442 (561)
.+-.... ..+..+++.+ +.++++.++..++.+++.+.|++. ++++..+ ..+.+.+++.
T Consensus 273 -~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~g~~~~~~~~---------------- 331 (398)
T 3a2b_A 273 -ASMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLGAT-ESPILPIFIR---------------- 331 (398)
T ss_dssp -BCCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBCSC-CSSEEEEECC----------------
T ss_pred -CCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcCCC-CCCEEEEEcC----------------
Confidence 0001111 1223344432 235677888889999999999987 7776533 3344333221
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE---
Q psy9807 443 FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI--- 519 (561)
Q Consensus 443 ~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--- 519 (561)
.+....++.+.|.++|.....+...
T Consensus 332 ----------------------------------------------------~~~~~~~l~~~l~~~gi~v~~~~~~~~~ 359 (398)
T 3a2b_A 332 ----------------------------------------------------SNEKTFWVTKMLQDDGVFVNPVVSPAVP 359 (398)
T ss_dssp ----------------------------------------------------CHHHHHHHHHHHHHTTEECEEECTTTSC
T ss_pred ----------------------------------------------------CHHHHHHHHHHHHHCCcEEEeeCCCCCC
Confidence 1122457888888886544333221
Q ss_pred CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 520 RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 520 ~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.+..++|+++.. .++++++++++++|+++.+++
T Consensus 360 ~~~~~iRis~~~-~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 360 AEESLIRFSLMA-THTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp GGGCEEEEECCT-TCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEEeC-CCCHHHHHHHHHHHHHHHHHh
Confidence 135689999774 458889999999999886543
No 82
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.83 E-value=1.2e-18 Score=180.61 Aligned_cols=319 Identities=10% Similarity=0.010 Sum_probs=201.0
Q ss_pred HHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCC--CccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 107 ADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDL--PKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 107 ~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
.+.+...++.....|... ..++++++.+++++.+|. +++ ..+||+|||+++..++.+....
T Consensus 43 ~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~---------~v~~~~g~~~a~~~~~~~l~~~------ 105 (383)
T 3kax_A 43 QTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQKE---------WIVFSAGIVPALSTSIQAFTKE------ 105 (383)
T ss_dssp HHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCCGG---------GEEEESCHHHHHHHHHHHHCCT------
T ss_pred HHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCChh---------hEEEcCCHHHHHHHHHHHhCCC------
Confidence 344444444333333333 578999999999999994 333 6799999999998777664211
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C---CCccChhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E---FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~---~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
++++++.... .+...++...|.+++.+|. . ++.+|+++|+++|.. .+.+|+++..+
T Consensus 106 -----------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~v~i~~p~ 166 (383)
T 3kax_A 106 -----------NESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ--------GVKLMLLCSPH 166 (383)
T ss_dssp -----------TCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT--------TCCEEEEESSB
T ss_pred -----------CCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc--------CCeEEEEeCCC
Confidence 2244444444 6677778888999999988 3 235999999999955 46677778888
Q ss_pred CCCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCc---cccceeeecCCcccc-ccccceeEEecC
Q psy9807 260 TNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV---ELADSFNFNPHKWML-VTFDCSAMWLKD 332 (561)
Q Consensus 260 t~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi---~~aDsi~~~~HK~l~-~P~g~g~l~~r~ 332 (561)
+.+|.+-| +++|+++|++||+++++|++|+..............-. ...+.+..++||+++ .....|.++..+
T Consensus 167 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 246 (383)
T 3kax_A 167 NPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPN 246 (383)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC
T ss_pred CCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCC
Confidence 99999976 56666669999999999999986443221111111100 123578889999998 445678877755
Q ss_pred hhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Q psy9807 333 PSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRS-DDR 409 (561)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~g 409 (561)
+............+. . -....+..+++...+ +.+.++++.++..++.+++.+.|++ +|+
T Consensus 247 ~~~~~~~~~~~~~~~---------------~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 308 (383)
T 3kax_A 247 EKLRQAFTSIQYRQG---------------F---HGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPT 308 (383)
T ss_dssp HHHHHHHHHHHHHTT---------------C---CCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhhcc---------------c---CCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 543322111100000 0 001223333333333 3556788888999999999999998 789
Q ss_pred eEEecccccccee-eecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcce
Q psy9807 410 FEVIYEVLMGLVC-FRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 488 (561)
Q Consensus 410 ~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v 488 (561)
++++.+. .+.+. +++..
T Consensus 309 ~~~~~~~-~~~~~~~~~~~------------------------------------------------------------- 326 (383)
T 3kax_A 309 LSVMKPE-GSFLLWIDCSA------------------------------------------------------------- 326 (383)
T ss_dssp CEECCCS-BSSEEEEECGG-------------------------------------------------------------
T ss_pred ceEecCC-ceEEEEEEccc-------------------------------------------------------------
Confidence 8877543 33322 22211
Q ss_pred eeecCCCcHHHHHHHHHHH-hCCcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 489 CFRLKGPNEINEKLLKRIN-GNGKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 489 ~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
.+. ...++.+.|. +.|.....+... .+..++|++++ +++++++++++.|.++.
T Consensus 327 ----~~~--~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 327 ----LNL--SQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG---CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp ----GCC--CHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS---SCHHHHHHHHHHHHHHH
T ss_pred ----cCC--CHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc---CCHHHHHHHHHHHHHHh
Confidence 001 1346788887 456444332221 23568999966 37889999999987753
No 83
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.83 E-value=2.1e-19 Score=187.91 Aligned_cols=307 Identities=8% Similarity=-0.042 Sum_probs=194.3
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..+...++|+.+++++++++|.++. -+++++||+|+..++.++... ++.+++.
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~~----------~i~~~sGt~a~~~a~~~~~~~-----------------gd~Vl~~ 115 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEHA----------NVQPHSGAQANMAVYFTVLEH-----------------GDTVLGM 115 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCCT-----------------TCEEEEE
T ss_pred cchHHHHHHHHHHHHHHHHhCCCce----------EEEecCcHHHHHHHHHHhcCC-----------------CCEEEEe
Confidence 4467788999999999999998743 355677799998887765211 1244444
Q ss_pred ccc-chHHH-H--HHhcc--CCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH
Q psy9807 203 PAC-TELEV-V--MLDWL--GKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 203 ~s~-~s~~k-a--a~~~g--~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
... .+... + +...| .+++.++. .++.+|+++|+++|.+ . .+.+|++ ..++.|...|+++|.++
T Consensus 116 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~--~-----~~~~v~~--~~~~~~~~~~l~~i~~l 186 (405)
T 2vi8_A 116 NLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARL--H-----RPKLIVA--AAAAYPRIIDFAKFREI 186 (405)
T ss_dssp CGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH--H-----CCSEEEE--CCSSCCSCCCHHHHHHH
T ss_pred cccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHh--c-----CCeEEEE--eCCCCCccCCHHHHHHH
Confidence 333 22211 1 11223 36666765 5678999999999975 2 2344554 33556777899999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
|++||+++++|++|+.+....+... ..++.+|+++.++||++++|.| |+++++ +............|..
T Consensus 187 ~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~~~~l~~~~~~~~~------ 255 (405)
T 2vi8_A 187 ADEVGAYLMVDMAHIAGLVAAGLHP---NPVPYAHFVTTTTHKTLRGPRG-GMILCQ-EQFAKQIDKAIFPGIQ------ 255 (405)
T ss_dssp HHHHTCEEEEECTTTHHHHHTTSSC---CSTTTCSEEEEESSSTTCCCSC-EEEEEC-HHHHHHHHHHHTTTTC------
T ss_pred HHHcCCEEEEEccccccccccCcCC---CccccCCEEEEeccccCCCCCC-eEEEEc-HHHHHHHHhhhccccc------
Confidence 9999999999999984333222111 1223569999999999998888 888875 3333221111111100
Q ss_pred CCCCCcccccCcCCc-chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc-cccceeeecccCcccc
Q psy9807 355 APDYRHWQIPLGRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV-LMGLVCFRLKHWQIPL 432 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~-~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~-~~~~v~f~~~~~~~~~ 432 (561)
++... ....+..+++.+...+++++.++..++++++.+.|++. |++++.+. ..+.+.+++.+.
T Consensus 256 ----------~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~---- 320 (405)
T 2vi8_A 256 ----------GGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRPQ---- 320 (405)
T ss_dssp ----------SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGG----
T ss_pred ----------CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccCC----
Confidence 01111 22233445555445678899999999999999999998 88887653 344444433210
Q ss_pred ccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcE
Q psy9807 433 GRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKI 512 (561)
Q Consensus 433 ~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~ 512 (561)
+.+ ...+.+.|.+.|..
T Consensus 321 -------------------------------------------------------------~~~--~~~~~~~l~~~gi~ 337 (405)
T 2vi8_A 321 -------------------------------------------------------------QLT--GKTAEKVLDEVGIT 337 (405)
T ss_dssp -------------------------------------------------------------TCC--HHHHHHHHHHHTEE
T ss_pred -------------------------------------------------------------CCC--HHHHHHHHHHcCce
Confidence 001 34567778777754
Q ss_pred EEEee------eECCEEEEEEEecCC---CCCHHHHHHHHHHHHHHHHHHH
Q psy9807 513 HLVPS------KIRDVYFLRMAVCSR---YSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 513 ~~~~~------~~~g~~~lR~~~~~~---~t~~~di~~l~~~l~~~~~~~~ 554 (561)
...+. ...+...+|+++..+ ..+++|+++++++|+++.+++.
T Consensus 338 v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 338 VNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp CEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred eccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 43322 111345799997752 4578999999999998876653
No 84
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.82 E-value=1.7e-18 Score=180.16 Aligned_cols=268 Identities=9% Similarity=0.008 Sum_probs=172.9
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCC-CeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~-~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
+.+.+...++.....|...+...++++.+.+|+.+.+|.+-+ .. ..++|+|||+++..++.+...
T Consensus 48 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~-------~~~~v~~~~g~~~a~~~~~~~~~~------- 113 (386)
T 1u08_A 48 LQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPD-------ADSDITVTAGATEALYAAITALVR------- 113 (386)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCC-------TTTTEEEESSHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCCCEEEcCChHHHHHHHHHHhCC-------
Confidence 444444444432334444445688999999999999887522 13 579999999999877765411
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
+ ++++++.... .++..+++..|.+++.+|. . ++.+|+++|+++|.+ .+.+|+++..++.
T Consensus 114 ---~-------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~--------~~~~v~l~~p~np 175 (386)
T 1u08_A 114 ---N-------GDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSE--------RTRLVILNTPHNP 175 (386)
T ss_dssp ---T-------TCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCT--------TEEEEEEESSCTT
T ss_pred ---C-------CCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcc--------cCEEEEEeCCCCC
Confidence 0 2345555545 6777778888999999998 3 578999999999865 5677878888889
Q ss_pred CccccC---HHHHHHHHhhcCceEEechhcccccccCccccccc--cCccccceeeecCCcccccc-ccceeEEecChhh
Q psy9807 262 CCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLM--KGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSW 335 (561)
Q Consensus 262 tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~--~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~ 335 (561)
+|.+-| +++|+++|++||+|+++|++|+............. .+....|.++.++||+++.| ..+|+++++ +..
T Consensus 176 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~ 254 (386)
T 1u08_A 176 SATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAP-API 254 (386)
T ss_dssp TCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECC-HHH
T ss_pred CCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcC-HHH
Confidence 999875 79999999999999999999986433221111111 11124589999999999744 237888875 333
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
.. .+.....+. .++ .+ ......+..+++. +.+.++++.++..++.+++.+.|++. ++++..+
T Consensus 255 ~~-~l~~~~~~~------------~~~--~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 316 (386)
T 1u08_A 255 SA-EIRKVHQYL------------TFS--VN-TPAQLALADMLRA-EPEHYLALPDFYRQKRDILVNALNES-RLEILPC 316 (386)
T ss_dssp HH-HHHHHHHHH------------TSS--CC-HHHHHHHHHHHHH-CTHHHHTHHHHHHHHHHHHHHHTTSS-SCEECCC
T ss_pred HH-HHHHHHHhh------------ccC--CC-hHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCC
Confidence 22 221100000 000 00 0111122223332 24567888889999999999999987 8887654
Q ss_pred ccccceeee
Q psy9807 416 VLMGLVCFR 424 (561)
Q Consensus 416 ~~~~~v~f~ 424 (561)
.....+.++
T Consensus 317 ~~g~~~~~~ 325 (386)
T 1u08_A 317 EGTYFLLVD 325 (386)
T ss_dssp CBSSEEEEE
T ss_pred CceEEEEEe
Confidence 433444443
No 85
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.82 E-value=5.6e-18 Score=174.63 Aligned_cols=285 Identities=12% Similarity=0.027 Sum_probs=193.0
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++.+++++++|.+++ ..+||+|||+++..++.+.... ++++++.... .++..
T Consensus 70 ~~lr~~la~~~~~~~~---------~v~~~~g~t~a~~~~~~~~~~~-----------------gd~vl~~~~~~~~~~~ 123 (363)
T 3ffh_A 70 SSLRKEVADFYQLEEE---------ELIFTAGVDELIELLTRVLLDT-----------------TTNTVMATPTFVQYRQ 123 (363)
T ss_dssp HHHHHHHHHHHTCCGG---------GEEEESSHHHHHHHHHHHHCST-----------------TCEEEEEESSCHHHHH
T ss_pred HHHHHHHHHHhCCChh---------hEEEeCCHHHHHHHHHHHHccC-----------------CCEEEEcCCChHHHHH
Confidence 4556677888887654 6799999999998777653110 2345554444 66777
Q ss_pred HHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc--CceEEechh
Q psy9807 211 VMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK--DVWLHVDAA 287 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~--~~~lhVDaA 287 (561)
++...|.+++.+|. .++.+|+++|++++.+ .+.+|+++...+.||.+.|+++|.++|+.+ |+++++|++
T Consensus 124 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~ 195 (363)
T 3ffh_A 124 NALIEGAEVREIPLLQDGEHDLEGMLNAIDE--------KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEA 195 (363)
T ss_dssp HHHHHTCEEEEEECCTTSCCCHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECT
T ss_pred HHHHcCCEEEEecCCCCCCcCHHHHHHhccc--------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCc
Confidence 88888999999999 6899999999999976 577888888899999999999999999988 999999999
Q ss_pred cccccccCccccccccCc--cccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccccc
Q psy9807 288 YAGSAFICPENRYLMKGV--ELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIP 364 (561)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi--~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (561)
|+.... .......... ..-+.+..+++|+++.| ..+|++++ ++............|
T Consensus 196 ~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~------------------ 254 (363)
T 3ffh_A 196 YIEYVT--PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIA-DKEIIRQLNIVRPPF------------------ 254 (363)
T ss_dssp TGGGCS--SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEE-CHHHHHHHHHTCCSC------------------
T ss_pred hHhhcC--ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeec-CHHHHHHHHHhCCCC------------------
Confidence 985443 1111111111 12246688999999744 34588887 444333222111111
Q ss_pred CcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHH
Q psy9807 365 LGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWF 443 (561)
Q Consensus 365 ~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~ 443 (561)
....+..+++...+. .+.++++.++..++.+++.+.|++.+++++.. +..+.+.+++
T Consensus 255 ---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~~~~~~~~------------------ 312 (363)
T 3ffh_A 255 ---NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYP-ANGNFVLIDL------------------ 312 (363)
T ss_dssp ---CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECC-CCSSEEEEEC------------------
T ss_pred ---CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceECC-CCCeEEEEEC------------------
Confidence 122333343444332 35678888899999999999999977888753 3334433322
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEE
Q psy9807 444 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVY 523 (561)
Q Consensus 444 ~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~ 523 (561)
.. ...++.+.|.+.|.....+.......
T Consensus 313 -------------------------------------------------~~---~~~~~~~~l~~~gi~v~~g~~~~~~~ 340 (363)
T 3ffh_A 313 -------------------------------------------------GI---EAGTIFSYLEKNGYITRSGAALGFPT 340 (363)
T ss_dssp -------------------------------------------------SS---CHHHHHHHHHHTTEECEETTTTTCTT
T ss_pred -------------------------------------------------CC---CHHHHHHHHHHCCeEEEeCccCCCCC
Confidence 11 13467888888875444333222246
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 524 FLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 524 ~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
++|++++ +++|+++++++|+++
T Consensus 341 ~iRis~~----~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 341 AVRITIG----KEEDNSAVIALLEKL 362 (363)
T ss_dssp EEEEECC----CHHHHHHHHHHHHHH
T ss_pred eEEEECC----CHHHHHHHHHHHHHh
Confidence 8999855 778999999999864
No 86
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.82 E-value=5.9e-19 Score=181.55 Aligned_cols=304 Identities=12% Similarity=-0.031 Sum_probs=189.9
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCCh-hHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTA-SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~gg-T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
++...++.+++.+++++++|.++. ...+||+|+ |+|+..++.+.... + .+...|.
T Consensus 43 ~~~~~~~~~~l~~~la~~~g~~~~--------~~v~~~~g~gt~al~~~~~~l~~~---------------~-~~g~~vi 98 (360)
T 1w23_A 43 SQSYEEVHEQAQNLLRELLQIPND--------YQILFLQGGASLQFTMLPMNLLTK---------------G-TIGNYVL 98 (360)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTT--------EEEEEESSHHHHHHHHHHHHHCCT---------------T-CEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEECCcchHHHHHHHHHhcCC---------------C-CcccEEE
Confidence 677778888999999999999631 156889888 89987766543210 0 0112333
Q ss_pred ccc--chHHHHHHhccCCeEEeeC-C-CCccChhhHHH-HHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PAC--TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGG-VIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~--~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~-~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
.+. +.....+...| +++.+|. . ++.+|+++|++ ++.+ ++.+|+.+..++.||.+-| +++++
T Consensus 99 ~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~--------~~k~v~~~~~~nptG~~~~-----~i~~~ 164 (360)
T 1w23_A 99 TGSWSEKALKEAKLLG-ETHIAASTKANSYQSIPDFSEFQLNE--------NDAYLHITSNNTIYGTQYQ-----NFPEI 164 (360)
T ss_dssp CSHHHHHHHHHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCCT--------TEEEEEEESEETTTTEECS-----SCCCC
T ss_pred ecchhHHHHHHHHHhC-CeEEeecccccCcCCccchHhhccCC--------CCCEEEEeCCCCCcceecc-----ccccc
Confidence 444 32233455567 9999998 3 67799999998 7755 5788888889999999855 33448
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPD 357 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (561)
||+++++|+||+.+....+ +..+ |+++.++||+++ |.|+|++++++. .+.......+.|+..... ..
T Consensus 165 ~~~~li~D~a~~~~~~~~~-----~~~~---di~~~s~sK~~~-~~G~G~~~~~~~-~~~~~~~~~~~~~~~~~~---~~ 231 (360)
T 1w23_A 165 NHAPLIADMSSDILSRPLK-----VNQF---GMIYAGAQKNLG-PSGVTVVIVKKD-LLNTKVEQVPTMLQYATH---IK 231 (360)
T ss_dssp CSSCEEEECTTTTTSSCCC-----GGGC---SEEEEETTTTTS-CTTCEEEEEEHH-HHCSCCTTCCGGGCHHHH---HH
T ss_pred CCceEEEechhhcCCCCcC-----cccC---CEEEEEcccccC-CCCcEEEEEcHH-HHhhcccCCcchhhhhhh---hh
Confidence 9999999999986532211 1222 899999999887 778999998653 222111111111100000 00
Q ss_pred CCcccccCcCC-cchHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHhcCCCe-EEec-cc-ccc-ceeeecccCccc
Q psy9807 358 YRHWQIPLGRR-FRSLKLWFVLRLLGVK-YLQEYIRKQISLAKEFEQLVRSDDRF-EVIY-EV-LMG-LVCFRLKHWQIP 431 (561)
Q Consensus 358 ~~~~~~~~sr~-~~al~lw~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~g~-~l~~-~~-~~~-~v~f~~~~~~~~ 431 (561)
.... ..+.. .....+..+++.+... +++++.++..++++++.+.|++++++ .... +. ..+ ++.|++
T Consensus 232 -~~~~-~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------ 303 (360)
T 1w23_A 232 -SDSL-YNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNL------ 303 (360)
T ss_dssp -TTTC-SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEEC------
T ss_pred -ccCC-CCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEc------
Confidence 0000 01111 1223445556655554 78899999999999999999998765 5432 21 223 433332
Q ss_pred cccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCc
Q psy9807 432 LGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGK 511 (561)
Q Consensus 432 ~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~ 511 (561)
.+ .....++.+.|.+.|.
T Consensus 304 -------------------------------------------------------------~~-~~~~~~~~~~l~~~gi 321 (360)
T 1w23_A 304 -------------------------------------------------------------RN-EELNQQFLAKAKEQGF 321 (360)
T ss_dssp -------------------------------------------------------------SS-HHHHHHHHHHHHHTTE
T ss_pred -------------------------------------------------------------CC-CccHHHHHHHHHHCCe
Confidence 11 1123467777777775
Q ss_pred EEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 512 IHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 512 ~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
....+.. ...++|+++.. .++++++++++++|+++.+
T Consensus 322 ~~~~~~~--~~~~iRis~~~-~~~~~~i~~~~~~l~~~~~ 358 (360)
T 1w23_A 322 VGLNGHR--SVGGCRASIYN-AVPIDACIALRELMIQFKE 358 (360)
T ss_dssp ESCBCCT--TTCSEEEECCT-TSCHHHHHHHHHHHHHHHH
T ss_pred eeecCCC--CCCeEEEEecC-CCCHHHHHHHHHHHHHHHh
Confidence 4422211 13579999774 5688999999999988754
No 87
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.82 E-value=2e-18 Score=182.51 Aligned_cols=325 Identities=10% Similarity=0.036 Sum_probs=201.7
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHH--HHHHHHHHhcCCCCCCccccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAK--AKTMQRVKEAHPDWKDSDIIA 197 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar--~~~~~~~~~~~~~~~~~~~~~ 197 (561)
.|.......++++.+.+|+.+.+|.+-. ....+||+|||+++..++.+.. .. ++
T Consensus 77 ~y~~~~g~~~lr~~la~~~~~~~g~~~~-------~~~i~~t~g~t~al~~~~~~l~~~~~-----------------gd 132 (437)
T 3g0t_A 77 IYPNLDGLPELKQEASRFAKLFVNIDIP-------ARACVPTVGSMQGCFVSFLVANRTHK-----------------NR 132 (437)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESHHHHHHHHHHHHHTTSCT-----------------TC
T ss_pred CCCCCCChHHHHHHHHHHHHHhhCCCCC-------cccEEEeCCHHHHHHHHHHHHhcCCC-----------------CC
Confidence 3444334578999999999988886522 1267999999999988776642 11 23
Q ss_pred --ceEEeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HH
Q psy9807 198 --NLIASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LE 269 (561)
Q Consensus 198 --~~vv~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~ 269 (561)
++++.... .++..++...|.+++.+|. +++.+|+++|+++|+. . .+.+|+++..++.||.+-| ++
T Consensus 133 ~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~--~-----~~~~v~l~~p~nptG~~~~~~~l~ 205 (437)
T 3g0t_A 133 EYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQT--G-----QFCSIIYSNPNNPTWQCMTDEELR 205 (437)
T ss_dssp SCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTT--T-----CCCEEEEESSCTTTCCCCCHHHHH
T ss_pred ccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhc--C-----CceEEEEeCCCCCCCCcCCHHHHH
Confidence 45555445 6777788888999999998 4557999999999943 1 4566777777889999876 77
Q ss_pred HHHHHHhhcCceEEechhcccccccCc-cc---c---ccccCccccceeeecCCcccc-ccccceeEEecChhhHHHhhc
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICP-EN---R---YLMKGVELADSFNFNPHKWML-VTFDCSAMWLKDPSWVVNAFN 341 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~-~~---~---~~~~gi~~aDsi~~~~HK~l~-~P~g~g~l~~r~~~~l~~~~~ 341 (561)
+|+++|++||+++++|++|+....... .. . ..+.+....+.++.++||+++ ....+|+++.++ ..+...+.
T Consensus 206 ~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~ 284 (437)
T 3g0t_A 206 IIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISG-KLYEREYP 284 (437)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECH-HHHHCBCG
T ss_pred HHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECH-HHhhhhhh
Confidence 789999999999999999985432210 00 0 111122234688999999998 445578888753 32220100
Q ss_pred -cCCCccccCCCCCCCC-CCcccccCcCCcchHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHHHhcCCCeEEe-
Q psy9807 342 -VDPLYLKHDQQGSAPD-YRHWQIPLGRRFRSLKLWFVLRLLGVKY-----LQEYIRKQISLAKEFEQLVRSDDRFEVI- 413 (561)
Q Consensus 342 -~~~~yl~~~~~~~~~~-~~~~~~~~sr~~~al~lw~~l~~~g~~g-----~~~~~~~~~~la~~l~~~l~~~~g~~l~- 413 (561)
....+..... ... .........-....+..+++...+.... ++++.++..++.+++.+.|++. ++++.
T Consensus 285 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 360 (437)
T 3g0t_A 285 DLEESFGRLRF---GEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVY 360 (437)
T ss_dssp GGHHHHSCSBH---HHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESS
T ss_pred cccccccccch---hHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEec
Confidence 0000000000 000 0000000000123344445555554333 7888899999999999999998 88887
Q ss_pred -----cc-ccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcc
Q psy9807 414 -----YE-VLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 487 (561)
Q Consensus 414 -----~~-~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~ 487 (561)
.+ .....+.+++.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~------------------------------------------------------------- 379 (437)
T 3g0t_A 361 DKDGNEPLADGFYFTVGYK------------------------------------------------------------- 379 (437)
T ss_dssp CEETTEECCSSSEEEEEET-------------------------------------------------------------
T ss_pred cccCCCCCceeEEEEEecC-------------------------------------------------------------
Confidence 34 33333333221
Q ss_pred eeeecCCCcHHHHHHHHHHHhCCcEEEEeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 488 VCFRLKGPNEINEKLLKRINGNGKIHLVPSKIR--DVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 488 v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
+.+ ..++.+.|.++|.......... ...++|++++ .. +++|+++++++|.++.+
T Consensus 380 ------~~~--~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~-~~-~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 380 ------GMD--SSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTS-LL-PESQFPDLEKRLQMLNA 435 (437)
T ss_dssp ------TCC--HHHHHHHHHHTTEECEESTTTTCCCTTCEEEECS-SS-CGGGHHHHHHHHHHHHH
T ss_pred ------CCC--HHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEe-cC-CHHHHHHHHHHHHHHHh
Confidence 111 3467888888875444322111 1157999976 33 77899999999988754
No 88
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.82 E-value=2.1e-18 Score=179.24 Aligned_cols=292 Identities=12% Similarity=0.005 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE 207 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s 207 (561)
....++.+.+++++|.++ .+++++||+++..++.+... + ++.+++.... .+
T Consensus 84 ~~~~~l~~~la~~~g~~~-----------~i~~~sGt~a~~~~~~~~~~----------~-------gd~v~~~~~~~~~ 135 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYSR-----------ALLFISGFAANQAVIAAMMA----------K-------EDRIAADRLSHAS 135 (384)
T ss_dssp HHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHCC----------T-------TCEEEEETTCCHH
T ss_pred HHHHHHHHHHHHHhCCCc-----------EEEeCCcHHHHHHHHHHhCC----------C-------CcEEEEcccccHH
Confidence 445566667777778763 48888889999887655311 0 1223333333 66
Q ss_pred HHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechh
Q psy9807 208 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAA 287 (561)
Q Consensus 208 ~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA 287 (561)
...++...|.+++.+| .+|+++|++.|++ .. ..+.+|+.+...+.+|.+.|+++|.++|++||+++++|++
T Consensus 136 ~~~~~~~~g~~~~~~~----~~d~~~l~~~l~~--~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~ 206 (384)
T 1bs0_A 136 LLEAASLSPSQLRRFA----HNDVTHLARLLAS--PC---PGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDA 206 (384)
T ss_dssp HHHHHHTSSSEEEEEC----TTCHHHHHHHHHS--CC---SSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECT
T ss_pred HHHHHHHcCCCEEEeC----CCCHHHHHHHHHh--cC---CCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECC
Confidence 6677788888998888 4689999999976 31 1256777777888999999999999999999999999999
Q ss_pred cccccccCccccccccCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCc
Q psy9807 288 YAGSAFICPENRYLMKGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLG 366 (561)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~s 366 (561)
|+.+.. .+......... ...|+++.++||+++ |.| |+++.+ +..+.........|...
T Consensus 207 ~~~~~~-~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~----------------- 265 (384)
T 1bs0_A 207 HGTGVI-GEQGRGSCWLQKVKPELLVVTFGKGFG-VSG-AAVLCS-STVADYLLQFARHLIYS----------------- 265 (384)
T ss_dssp TTTTTS-SGGGCCHHHHTTCCCSEEEEESSSTTS-SCC-EEEEEC-HHHHHHHHHHCHHHHSS-----------------
T ss_pred ccccee-cCCCCchHHhcCCCCcEEEeeccchhh-ccC-cEEEeC-HHHHHHHHHhchhhhcC-----------------
Confidence 974332 11111111111 236899999999998 555 777774 44333221111122110
Q ss_pred CCcchHH---HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHH
Q psy9807 367 RRFRSLK---LWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWF 443 (561)
Q Consensus 367 r~~~al~---lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~ 443 (561)
.....+. +..+++.+....++++.++..++++++.+.|++. ++++.. +..+++.+++.
T Consensus 266 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~----------------- 326 (384)
T 1bs0_A 266 TSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLAD-SCSAIQPLIVG----------------- 326 (384)
T ss_dssp BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEECS-CCSSBCCEEEE-----------------
T ss_pred CCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCcccC-CCCCEEEEEeC-----------------
Confidence 0112222 2334443322145678888999999999999987 777652 33344333221
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeee---EC
Q psy9807 444 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSK---IR 520 (561)
Q Consensus 444 ~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~ 520 (561)
......++.+.|.+.|........ ..
T Consensus 327 ---------------------------------------------------~~~~~~~l~~~l~~~gi~v~~~~~~~~~~ 355 (384)
T 1bs0_A 327 ---------------------------------------------------DNSRALQLAEKLRQQGCWVTAIRPPTVPA 355 (384)
T ss_dssp ---------------------------------------------------SHHHHHHHHHHHHHTTEECCEECTTSSCT
T ss_pred ---------------------------------------------------CHHHHHHHHHHHHHCCcEEEeecCCCCCC
Confidence 112245678888888644332221 13
Q ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 521 DVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 521 g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
+..++|+++. ..++++|+++++++|+++
T Consensus 356 ~~~~~Ri~~~-~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 356 GTARLRLTLT-AAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp TCEEECCBCC-TTCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEc-CCCCHHHHHHHHHHHHhh
Confidence 4578999966 456888999999999875
No 89
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.82 E-value=6.3e-18 Score=176.07 Aligned_cols=323 Identities=8% Similarity=-0.012 Sum_probs=203.0
Q ss_pred HHHHHHhhccccccccccChhhHH-HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 106 VADILSDSIACIGFTWIASPACTE-LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~-lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
+.+.+...++.....|... ..+ +++.+.+|+.+.+|.+.+ ....++|+|||+++..++.+....
T Consensus 46 v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~-------~~~v~~t~g~~~al~~~~~~l~~~------ 110 (390)
T 1d2f_A 46 IIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAID-------SQTVVYGPSVIYMVSELIRQWSET------ 110 (390)
T ss_dssp HHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCC-------GGGEEEESCHHHHHHHHHHHSSCT------
T ss_pred HHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCC-------HHHEEEcCCHHHHHHHHHHHhcCC------
Confidence 4444555554333334332 567 999999999998884321 025799999999987776653210
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CC---CccChhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EF---LACSGGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~---g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
++++++.... .++..++...|.+++.+|. .+ +.+|+++|+++|++ . .+.+|+++...
T Consensus 111 -----------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~--~-----~~~~v~l~~p~ 172 (390)
T 1d2f_A 111 -----------GEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK--P-----ECKIMLLCSPQ 172 (390)
T ss_dssp -----------TCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS--T-----TEEEEEEESSC
T ss_pred -----------CCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhcc--C-----CCeEEEEeCCC
Confidence 2345554444 6677777888999999998 33 36999999999865 2 46677777888
Q ss_pred CCCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCcc-c-cceeeecCCcccccc-ccceeEEecCh
Q psy9807 260 TNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE-L-ADSFNFNPHKWMLVT-FDCSAMWLKDP 333 (561)
Q Consensus 260 t~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~-~-aDsi~~~~HK~l~~P-~g~g~l~~r~~ 333 (561)
+.||.+-| +++|+++|++||+++++|++|+........... +..+. . .|. ..++||+++.| ..+|+++++++
T Consensus 173 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~ 250 (390)
T 1d2f_A 173 NPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP-WSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENS 250 (390)
T ss_dssp TTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCC-GGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSH
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcC-HHHcchhhHhh-ccCccHhhcccChhheEEEECCH
Confidence 88999876 899999999999999999999865432111111 11221 1 255 88999999744 34788888655
Q ss_pred hhHHHhhccCC-CccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Q psy9807 334 SWVVNAFNVDP-LYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRS-DDR 409 (561)
Q Consensus 334 ~~l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~g 409 (561)
........... .+ .+ . ....+..+++...+ +.+.+++..++..++.+++.+.|++ +|+
T Consensus 251 ~~~~~~~~~~~~~~----------~~------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 312 (390)
T 1d2f_A 251 SSRDAYLSALKGRD----------GL------S--SPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPE 312 (390)
T ss_dssp HHHHHHHHHHHTTS----------CC------C--SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHhhhc----------cc------C--CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 43332211100 00 00 0 01223333333333 3556788888889999999999998 788
Q ss_pred eEEecccccccee-eecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcce
Q psy9807 410 FEVIYEVLMGLVC-FRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 488 (561)
Q Consensus 410 ~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v 488 (561)
+++..+ ..+.+. +++.+.
T Consensus 313 ~~~~~~-~~~~~~~~~~~~~------------------------------------------------------------ 331 (390)
T 1d2f_A 313 LNWQIP-QSTYLAWLDLRPL------------------------------------------------------------ 331 (390)
T ss_dssp CCCCCC-SBCSEEEEECGGG------------------------------------------------------------
T ss_pred CEEecC-CccEEEEEEcccc------------------------------------------------------------
Confidence 876543 333332 322110
Q ss_pred eeecCCCcHHHHHHHHHHH-hCCcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 489 CFRLKGPNEINEKLLKRIN-GNGKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 489 ~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+.+ ..++.+.|. +.|..+..+... .+..++|++++. ++++++++++.|.++.++
T Consensus 332 -----~~~--~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 332 -----NID--DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC---PRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp -----CCC--HHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHHHHH
T ss_pred -----CCC--HHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 011 346788888 456544433222 234589999775 467899999888877654
No 90
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.82 E-value=7e-19 Score=184.14 Aligned_cols=237 Identities=14% Similarity=0.047 Sum_probs=153.0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|..++...++++ .+++++|.+ ..++++|||+|+..++.+++ . .+ +++++
T Consensus 59 y~~~~~~~~l~~----~la~~~~~~-----------~~v~~~~Gt~a~~~~l~~~~---~------~~-------gd~vl 107 (399)
T 2oga_A 59 YLLGPELEGFEA----EFAAYCETD-----------HAVGVNSGMDALQLALRGLG---I------GP-------GDEVI 107 (399)
T ss_dssp CSSSHHHHHHHH----HHHHHTTSS-----------EEEEESCHHHHHHHHHHHTT---C------CT-------TCEEE
T ss_pred CCCchhHHHHHH----HHHHHHCCC-----------eEEEecCHHHHHHHHHHHhC---C------CC-------cCEEE
Confidence 334455555554 556777765 35899999999988776641 0 00 12455
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
+.... .+...++...|.+++.+|. . ++.+|+++|+++|.+ .+.+|+. ++.+|.+.|+++|+++|++
T Consensus 108 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~--------~~~~v~~---~n~tG~~~~l~~i~~l~~~ 176 (399)
T 2oga_A 108 VPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITP--------RTRALLP---VHLYGHPADMDALRELADR 176 (399)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCT--------TEEEECC---BCGGGCCCCHHHHHHHHHH
T ss_pred ECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCC--------CCeEEEE---eCCcCCccCHHHHHHHHHH
Confidence 54444 6777778888999999998 4 678999999999866 4555553 4678999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCC--ccccccccceeEEecChhhHHHhhcc-CCCccccCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPH--KWMLVTFDCSAMWLKDPSWVVNAFNV-DPLYLKHDQQGS 354 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~H--K~l~~P~g~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~ 354 (561)
||+++++|++|+.+.... ... . + ...|.+++++| |+++.|...|+++.+++......... ...+
T Consensus 177 ~~~~li~Dea~~~g~~~~--~~~-~-~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~-------- 243 (399)
T 2oga_A 177 HGLHIVEDAAQAHGARYR--GRR-I-G-AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGS-------- 243 (399)
T ss_dssp HTCEECEECTTCTTCEET--TEE-T-T-CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTC--------
T ss_pred cCCEEEEECcccccCccC--Cee-c-c-cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCc--------
Confidence 999999999998543321 111 1 1 12489999985 99986555666666555443322110 0000
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
...+.........+...+..++....+ +.++++.++..++++++.+.|+++|++++..
T Consensus 244 ~~~~~~~~~g~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 301 (399)
T 2oga_A 244 RQKYSHETKGTNSRLDEMQAAVLRIRL--AHLDSWNGRRSALAAEYLSGLAGLPGIGLPV 301 (399)
T ss_dssp SSTTCCCSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCC
T ss_pred cccccccccccCCCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccC
Confidence 001111111122234556555554433 3456677888889999999999988887753
No 91
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.82 E-value=3.3e-18 Score=180.73 Aligned_cols=318 Identities=10% Similarity=-0.012 Sum_probs=201.1
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|...+...++++.+.+++.+. |.+-. ....++|+|||+|+..++.+..+. ++++
T Consensus 91 ~y~~~~g~~~lr~~la~~~~~~-~~~~~-------~~~v~~t~g~t~al~~~~~~l~~~-----------------gd~v 145 (427)
T 3dyd_A 91 GYAPSIGFLSSREEIASYYHCP-EAPLE-------AKDVILTSGCSQAIDLCLAVLANP-----------------GQNI 145 (427)
T ss_dssp SCCCTTCCHHHHHHHHHHHCBT-TBCCC-------GGGEEEESSHHHHHHHHHHHHCCT-----------------TCEE
T ss_pred CCCCCCCcHHHHHHHHHHHhhc-CCCCC-------hHHEEEecCcHHHHHHHHHHhcCC-----------------CCEE
Confidence 3444455667777776666543 33211 126799999999998877664311 2345
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIG 272 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~ 272 (561)
++.... .....++...|.+++.+|. .++.+|+++|++.|++ .+.+|+++...+.||.+-| +++|+
T Consensus 146 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~v~i~~p~nptG~~~~~~~l~~i~ 217 (427)
T 3dyd_A 146 LVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE--------KTACLIVNNPSNPCGSVFSKRHLQKIL 217 (427)
T ss_dssp EEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc--------CCCEEEEECCCCCCCCCCCHHHHHHHH
Confidence 554444 5666777888999999887 3568999999999876 4667888888999999999 99999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCcc-ccc-eeeecCCcccccc-ccceeEEecCh-----hhHHHhhccCC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE-LAD-SFNFNPHKWMLVT-FDCSAMWLKDP-----SWVVNAFNVDP 344 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aD-si~~~~HK~l~~P-~g~g~l~~r~~-----~~l~~~~~~~~ 344 (561)
++|++||+++++|.+|++.......... +..+. ..+ .++.++||.++.| ..+|.+++++. ..+...+....
T Consensus 218 ~~~~~~~~~~i~Deay~~~~~~g~~~~~-~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~ 296 (427)
T 3dyd_A 218 AVAARQCVPILADEIYGDMVFSDCKYEP-LATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLS 296 (427)
T ss_dssp HHHHHTTCCEEEECTTTTCBCSSCCCCC-GGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEcCchhhccCCCcCcc-HHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHH
Confidence 9999999999999999865432211111 11111 112 4566999986654 34788888763 11221111000
Q ss_pred CccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeee
Q psy9807 345 LYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 424 (561)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~ 424 (561)
.... ..-.+....+..+++....+.++++.++..++.+++.+.|+++|+++++.+.....+.++
T Consensus 297 ~~~~----------------~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~ 360 (427)
T 3dyd_A 297 QRIL----------------GPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVG 360 (427)
T ss_dssp HHHC----------------CSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEE
T ss_pred hccC----------------CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEe
Confidence 0000 000112223333444444677888999999999999999999999987755444443333
Q ss_pred cccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHH
Q psy9807 425 LKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLK 504 (561)
Q Consensus 425 ~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~ 504 (561)
+..... +......++.+
T Consensus 361 l~~~~~---------------------------------------------------------------~~~~~~~~~~~ 377 (427)
T 3dyd_A 361 IEMEHF---------------------------------------------------------------PEFENDVEFTE 377 (427)
T ss_dssp ECGGGC---------------------------------------------------------------TTCSSHHHHHH
T ss_pred cCHhhc---------------------------------------------------------------CCCCCHHHHHH
Confidence 321000 00011346777
Q ss_pred HHH-hCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 505 RIN-GNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 505 ~L~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+|. +.|.++..+.......++|++++ +++++|+++++.|.++.+++
T Consensus 378 ~l~~~~gV~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~~l~~~l~~~ 424 (427)
T 3dyd_A 378 RLVAEQSVHCLPATCFEYPNFIRVVIT---VPEVMMLEACSRIQEFCEQH 424 (427)
T ss_dssp HHHHHHCEECEEGGGGTCTTEEEEESC---SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEECCcccCCCCeEEEEEC---CCHHHHHHHHHHHHHHHHHh
Confidence 775 56655544443344568999965 57889999999998877653
No 92
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.82 E-value=2.2e-18 Score=181.98 Aligned_cols=333 Identities=8% Similarity=0.008 Sum_probs=208.4
Q ss_pred HHHHHHHHhhcccc---ccccccChhhHHHHHHHHHHHHHhcCCC---ccccccCCCCCCeEEeCChhHHHHHHHHHHHH
Q psy9807 104 AIVADILSDSIACI---GFTWIASPACTELEVVMLDWLGKMLDLP---KEFLACSGGKGGGVIQGTASEATLVALLGAKA 177 (561)
Q Consensus 104 ~~~~~~l~~~~n~~---~~~~~~sp~~~~lE~~~~~~la~l~g~~---~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~ 177 (561)
..+.+.+...++.. ...|...+...++++.+.+|+.+.+|.+ ++ ..++|+|||+++..++.+...
T Consensus 61 ~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~---------~v~~t~G~~~al~~~~~~l~~ 131 (425)
T 1vp4_A 61 KELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDED---------NLIFTVGSQQALDLIGKLFLD 131 (425)
T ss_dssp HHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGG---------GEEEEEHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcc---------cEEEeccHHHHHHHHHHHhCC
Confidence 34444444444322 2344444456889999999998887853 33 579999999998777665321
Q ss_pred HHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhc--CCceEEE
Q psy9807 178 KTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREM--CSDLLQV 253 (561)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~--g~~p~~v 253 (561)
+ ++++++.... .++..++...|.+++.+|. .++ +|+++|+++|++ .... +..+.+|
T Consensus 132 ----------~-------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~--~~~~~~~~~~~~v 191 (425)
T 1vp4_A 132 ----------D-------ESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDG-MDLNVLERKLSE--FDKNGKIKQVKFI 191 (425)
T ss_dssp ----------T-------TCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHH--HHHTTCGGGEEEE
T ss_pred ----------C-------CCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHHh--hhhcccCCCceEE
Confidence 0 1245554444 6777777888899999998 554 999999999965 3221 2246666
Q ss_pred -EEecCCCCCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCc--cccceeeecCCcccccccccee
Q psy9807 254 -VATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV--ELADSFNFNPHKWMLVTFDCSA 327 (561)
Q Consensus 254 -v~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi--~~aDsi~~~~HK~l~~P~g~g~ 327 (561)
+.+...+.||.+-| +++|+++|++||+++++|++|+.......... .+..+ ...+.+..+++|+++.-..+|+
T Consensus 192 ~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~~~~i~~~s~sK~~~~G~r~G~ 270 (425)
T 1vp4_A 192 YVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVD-PIFKIGGPERVVLLNTFSKVLAPGLRIGM 270 (425)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCC-CHHHHHCTTTEEEEEESTTTTCGGGCEEE
T ss_pred EECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCc-CHHHhCCCCCEEEEeccccccccccceEE
Confidence 56777888998865 67899999999999999999986433111111 11111 1236778899999982223788
Q ss_pred EEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHH
Q psy9807 328 MWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG----VKYLQEYIRKQISLAKEFEQL 403 (561)
Q Consensus 328 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g----~~g~~~~~~~~~~la~~l~~~ 403 (561)
++.+ +..+.........+ +.....+..+++.+.+. .+.++++.++..++.+++.+.
T Consensus 271 ~~~~-~~~~~~l~~~~~~~-------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 330 (425)
T 1vp4_A 271 VAGS-KEFIRKIVQAKQSA-------------------DLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNA 330 (425)
T ss_dssp EECC-HHHHHHHHHHHHHH-------------------HSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EeeC-HHHHHHHHHHhhhh-------------------cCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8875 33332211100000 00012333444444442 345677777788889999999
Q ss_pred Hhc-CC---CeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhh
Q psy9807 404 VRS-DD---RFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 479 (561)
Q Consensus 404 l~~-~~---g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~ 479 (561)
|++ .| ++++..+.....+.+++.+
T Consensus 331 L~~~~~~~~g~~~~~~~~g~~~~~~~~~---------------------------------------------------- 358 (425)
T 1vp4_A 331 LEEYFSDIPGVKWVKSEGGLFIWLTLPE---------------------------------------------------- 358 (425)
T ss_dssp HHHHSTTSTTCEECCCSBSSEEEEECCT----------------------------------------------------
T ss_pred HHHhCCCCCceEEecCCccEEEEEEcCC----------------------------------------------------
Confidence 987 35 6877655444444443321
Q ss_pred hhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 480 IYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI----RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 480 ~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
+.+ ..++.+.|.++|..+..+... .+..++|+++... ++++++++++.|.++.+++.+
T Consensus 359 --------------~~~--~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~--~~e~i~~~l~~l~~~l~~~~~ 420 (425)
T 1vp4_A 359 --------------GFD--TWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP--PDEKIVEGIKRLREVVLEYGK 420 (425)
T ss_dssp --------------TCC--TTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS--CHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------CCC--HHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC--CHHHHHHHHHHHHHHHHHHHh
Confidence 000 125677777776544433222 2456899997753 788999999999998877655
Q ss_pred H
Q psy9807 556 E 556 (561)
Q Consensus 556 ~ 556 (561)
+
T Consensus 421 ~ 421 (425)
T 1vp4_A 421 E 421 (425)
T ss_dssp H
T ss_pred h
Confidence 4
No 93
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.82 E-value=1.1e-17 Score=171.67 Aligned_cols=289 Identities=9% Similarity=-0.043 Sum_probs=193.1
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE 209 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ 209 (561)
..++.+++++++|.+++ ..++|+|||+++..++.+.... ++++++.... .++.
T Consensus 53 ~~~l~~~la~~~~~~~~---------~i~~~~g~~~a~~~~~~~l~~~-----------------gd~vl~~~~~~~~~~ 106 (354)
T 3ly1_A 53 ILMLGNKLAAHHQVEAP---------SILLTAGSSEGIRAAIEAYASL-----------------EAQLVIPELTYGDGE 106 (354)
T ss_dssp HHHHHHHHHHHTTSCGG---------GEEEESHHHHHHHHHHHHHCCT-----------------TCEEEEESSSCTHHH
T ss_pred hHHHHHHHHHHhCCChH---------HEEEeCChHHHHHHHHHHHhCC-----------------CCeEEECCCCchHHH
Confidence 45677788888998654 6799999999998777653210 2345555544 6777
Q ss_pred HHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh--cCceEEech
Q psy9807 210 VVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ--KDVWLHVDA 286 (561)
Q Consensus 210 kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~--~~~~lhVDa 286 (561)
.+++..|.+++.+|. .++.+|+++|+++|.+ . ..+.+|+++..++.+|.+-|++++.++++. ||+++++|+
T Consensus 107 ~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~--~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De 180 (354)
T 3ly1_A 107 HFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAA--Y----SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDE 180 (354)
T ss_dssp HHHHHTTCEEEEECCCTTSCCCHHHHHHHHHT--C----SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEEC
T ss_pred HHHHHcCCEEEEecCCCCCCCCHHHHHHHhcc--C----CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEec
Confidence 788888999999999 6899999999999973 1 157778888889999999999998888887 999999999
Q ss_pred hcccccccCccccccc---cCccccceeeecCCcccc-ccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccc
Q psy9807 287 AYAGSAFICPENRYLM---KGVELADSFNFNPHKWML-VTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQ 362 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~---~gi~~aDsi~~~~HK~l~-~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (561)
+|+.... ........ ......+.+..++||+++ ....+|+++. ++............|
T Consensus 181 ~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~---------------- 242 (354)
T 3ly1_A 181 AYAEFVN-DPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA-HPTVIALMGRYVAGE---------------- 242 (354)
T ss_dssp TTGGGCC-CTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC-CHHHHHHHGGGTTCS----------------
T ss_pred cHHHhcc-ccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec-CHHHHHHHHHhcCCC----------------
Confidence 9985432 21111111 111023588899999997 4456787777 444333221111110
Q ss_pred ccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhH
Q psy9807 363 IPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKL 441 (561)
Q Consensus 363 ~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~ 441 (561)
....+..+++...+. .+.++++.++..++.+++.+.|++. ++++. ++..+.+.+++
T Consensus 243 -----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~---------------- 299 (354)
T 3ly1_A 243 -----KINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYL-PSEGNFVFHQL---------------- 299 (354)
T ss_dssp -----CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEEC----------------
T ss_pred -----CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCCceEEEEEC----------------
Confidence 112233333333332 3567888889999999999999887 66655 33333333322
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECC
Q psy9807 442 WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRD 521 (561)
Q Consensus 442 w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g 521 (561)
.. ...++.+.|.+.|... .+....+
T Consensus 300 ---------------------------------------------------~~---~~~~~~~~l~~~gi~v-~g~~~~~ 324 (354)
T 3ly1_A 300 ---------------------------------------------------VV---PLKDYQTHMADAGVLI-GRAFPPA 324 (354)
T ss_dssp ---------------------------------------------------SS---CHHHHHHHHHHTTEEC-CCCCTTC
T ss_pred ---------------------------------------------------CC---CHHHHHHHHHHCCEEE-eecCCCC
Confidence 11 1346788888887543 3222234
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 522 VYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 522 ~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
..++|+++. +++|+++++++|+++.+
T Consensus 325 ~~~iRis~~----~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 325 DNWCRISLG----TPQEMQWVADTMREFRK 350 (354)
T ss_dssp TTEEEEECC----CHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcC----CHHHHHHHHHHHHHHHH
Confidence 568999954 67899999999988754
No 94
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.81 E-value=4.4e-18 Score=175.98 Aligned_cols=312 Identities=9% Similarity=0.017 Sum_probs=200.9
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+...++.....|...+...++++.+.+|+.+.+|.+.+ ....++|+|||+++..++.+....
T Consensus 47 v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~-------~~~v~~~~g~~~a~~~~~~~~~~~------- 112 (370)
T 2z61_A 47 IVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADII-------PDNIIITGGSSLGLFFALSSIIDD------- 112 (370)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCC-------GGGEEEESSHHHHHHHHHHHHCCT-------
T ss_pred HHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------hhhEEECCChHHHHHHHHHHhcCC-------
Confidence 334444444332334444445688999999999998885422 126799999999998877664210
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcc
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCA 264 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~ 264 (561)
++++++.... .+...++...|.+++.+| +|+++|++++.+ .+.+|+++..++.+|.
T Consensus 113 ----------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~-----~d~~~l~~~l~~--------~~~~v~~~~p~nptG~ 169 (370)
T 2z61_A 113 ----------GDEVLIQNPCYPCYKNFIRFLGAKPVFCD-----FTVESLEEALSD--------KTKAIIINSPSNPLGE 169 (370)
T ss_dssp ----------TCEEEEESSCCTHHHHHHHHTTCEEEEEC-----SSHHHHHHHCCS--------SEEEEEEESSCTTTCC
T ss_pred ----------CCEEEEeCCCchhHHHHHHHcCCEEEEeC-----CCHHHHHHhccc--------CceEEEEcCCCCCcCc
Confidence 2245555444 677777888888888887 799999998865 4667777888889999
Q ss_pred ccCHHHHHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhc
Q psy9807 265 FDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFN 341 (561)
Q Consensus 265 idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~ 341 (561)
+.|++ |.++|++||+++++|++|+.+.... ..... +.+....|.+..++||+++.| ..+|+++.++ ........
T Consensus 170 ~~~~~-l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~ 246 (370)
T 2z61_A 170 VIDRE-IYEFAYENIPYIISDEIYNGLVYEG-KCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND-EIIEAILK 246 (370)
T ss_dssp CCCHH-HHHHHHHHCSEEEEECTTTTCBSSS-CCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH-HHHHHHHH
T ss_pred ccCHH-HHHHHHHcCCEEEEEcchhhcccCC-CCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH-HHHHHHHH
Confidence 99999 9999999999999999998644321 11111 111234589999999999744 2378877754 33222111
Q ss_pred cCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccc
Q psy9807 342 VDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL---GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLM 418 (561)
Q Consensus 342 ~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~ 418 (561)
....+. -....+..+++...+ +.+.++++.++..++.+++.+.|++. ++++..+ ..
T Consensus 247 ~~~~~~-------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~ 305 (370)
T 2z61_A 247 LQQNLF-------------------ISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVNNP-IG 305 (370)
T ss_dssp HHHHHT-------------------SSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCCC-CB
T ss_pred HHhhcc-------------------cCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCC-Cc
Confidence 000000 001223333444444 45677888888999999999999987 7776543 22
Q ss_pred cceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHH
Q psy9807 419 GLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEI 498 (561)
Q Consensus 419 ~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~ 498 (561)
+.+.+ +.+.. .
T Consensus 306 ~~~~~------------------------------------------------------------------~~~~~---~ 316 (370)
T 2z61_A 306 AYYVF------------------------------------------------------------------PNIGE---D 316 (370)
T ss_dssp TTEEC------------------------------------------------------------------CBCSS---C
T ss_pred ceEEE------------------------------------------------------------------EecCC---C
Confidence 33221 11111 1
Q ss_pred HHHHHHHHH-hCCcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 499 NEKLLKRIN-GNGKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 499 ~~~l~~~L~-~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
..++.+.|. +.|.....+... .+..++|++++ +++++++++++.|.++.
T Consensus 317 ~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~---~~~~~i~~~~~~l~~~l 368 (370)
T 2z61_A 317 GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA---NSYENIKEGLERIKEFL 368 (370)
T ss_dssp HHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC---SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe---CCHHHHHHHHHHHHHHH
Confidence 346777886 566544332221 13568999977 47889999999888764
No 95
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.81 E-value=1.8e-17 Score=175.39 Aligned_cols=322 Identities=12% Similarity=0.059 Sum_probs=202.1
Q ss_pred cccChhhHHHHHHHHHHHHHhcC----CCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc
Q psy9807 121 WIASPACTELEVVMLDWLGKMLD----LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII 196 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g----~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~ 196 (561)
|...+...++++.+.+|+.+..| .+++ ..+||+|||+||..++.+.+.. +
T Consensus 82 y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~---------~v~~~~gg~~a~~~~~~~l~~~-----------------g 135 (435)
T 3piu_A 82 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN---------HLVLTAGATSANETFIFCLADP-----------------G 135 (435)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG---------GEEEEEHHHHHHHHHHHHHCCT-----------------T
T ss_pred cCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH---------HEEEcCChHHHHHHHHHHhcCC-----------------C
Confidence 33334457899999999998766 3332 6799999999998887664311 1
Q ss_pred cceEEeccc-chHHHHHH-hccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CH
Q psy9807 197 ANLIASPAC-TELEVVML-DWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CL 268 (561)
Q Consensus 197 ~~~vv~~s~-~s~~kaa~-~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl 268 (561)
+.+++.... .++..++. ..|.+++.+|. . ++.+|+++|+++|++ ....+..+.+|+.+..++.+|.+- ++
T Consensus 136 d~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~~~~~~~v~i~~p~nptG~~~~~~~l 213 (435)
T 3piu_A 136 EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQE--AEKRNLRVKGVLVTNPSNPLGTTMTRNEL 213 (435)
T ss_dssp CEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHH--HHHTTCCEEEEEEESSCTTTCCCCCHHHH
T ss_pred CeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHH--HHhcCCCeEEEEEcCCCCCCCCCCCHHHH
Confidence 234444344 56777766 67889999998 3 456899999999987 555555678888888888899885 45
Q ss_pred HHHHHHHhhcCceEEechhcccccccCcccccc---ccC--c------cccceeeecCCcccccc-ccceeEEecChhhH
Q psy9807 269 EEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL---MKG--V------ELADSFNFNPHKWMLVT-FDCSAMWLKDPSWV 336 (561)
Q Consensus 269 ~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~---~~g--i------~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l 336 (561)
++|+++|++||+++++|++|++........... ... + ..-..+..++||+++.| ..+|+++.++....
T Consensus 214 ~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~ 293 (435)
T 3piu_A 214 YLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV 293 (435)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHH
T ss_pred HHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHH
Confidence 888899999999999999998654322211111 010 0 11137788999999744 56788888665433
Q ss_pred HHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 337 VNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG--VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
. .+.....+.. .+ ......+...+.... .+.+++..++..++.+++.+.|++. ++++..
T Consensus 294 ~-~~~~~~~~~~----------------~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 354 (435)
T 3piu_A 294 A-AATKMSSFGL----------------VS-SQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLN 354 (435)
T ss_dssp H-HHHHHGGGSC----------------CC-HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECC
T ss_pred H-HHHHHhhcCC----------------CC-HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccC
Confidence 2 2221111100 00 011111111222111 3355677788888999999999987 888765
Q ss_pred cccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC
Q psy9807 415 EVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG 494 (561)
Q Consensus 415 ~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~ 494 (561)
+.....+.+++.+... ..
T Consensus 355 ~~~g~~~~~~l~~~~~--------------------------------------------------------------~~ 372 (435)
T 3piu_A 355 GNAGLFCWVDMRHLLR--------------------------------------------------------------SN 372 (435)
T ss_dssp CCSSSEEEEECGGGSS--------------------------------------------------------------SS
T ss_pred CCeeEEEEEEcccccc--------------------------------------------------------------cC
Confidence 4443444443322100 00
Q ss_pred CcHHHHHHHHHHHhC-CcEEEEeee--ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 495 PNEINEKLLKRINGN-GKIHLVPSK--IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 495 ~~~~~~~l~~~L~~~-g~~~~~~~~--~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
......++.++|.++ |..+..+.. ..+..++|+++.. . ++++++++++.|.++.+++
T Consensus 373 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~-~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 373 TFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFAN-L-PERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp SHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSS-S-CHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeC-C-CHHHHHHHHHHHHHHHHHH
Confidence 011234678888777 644333222 1345689999743 3 7889999999999887654
No 96
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.81 E-value=3.7e-18 Score=176.22 Aligned_cols=286 Identities=14% Similarity=0.029 Sum_probs=186.7
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++.+++++++|.++. ...+||+|||+++..++.+.... ++++++.... .++..
T Consensus 70 ~~l~~~la~~~g~~~~--------~~i~~~~g~t~a~~~~~~~~~~~-----------------gd~Vl~~~~~~~~~~~ 124 (367)
T 3euc_A 70 EALRAKLKEVMQVPAG--------MEVLLGNGSDEIISMLALAAARP-----------------GAKVMAPVPGFVMYAM 124 (367)
T ss_dssp HHHHHHHHHHHTCCTT--------CEEEEEEHHHHHHHHHHHHTCCT-----------------TCEEEEEESCSCCSCH
T ss_pred HHHHHHHHHHhCCCCc--------ceEEEcCCHHHHHHHHHHHHcCC-----------------CCEEEEcCCCHHHHHH
Confidence 3455566778888321 25799999999987776653110 2345544444 56666
Q ss_pred HHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHHHHHhhc--CceEEe
Q psy9807 211 VMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIGQVCRQK--DVWLHV 284 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~~ia~~~--~~~lhV 284 (561)
++...|.+++.+|. .++.+|+++|++++.+ . ++.+|+++..++.+|.+ +++++|+++|++| |+++++
T Consensus 125 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~ 197 (367)
T 3euc_A 125 SAQFAGLEFVGVPLRADFTLDRGAMLAAMAE--H-----QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVV 197 (367)
T ss_dssp HHHTTTCEEEEEECCTTSCCCHHHHHHHHHH--H-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEE
T ss_pred HHHHcCCeEEEecCCCCCCCCHHHHHHHhhc--c-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEE
Confidence 77788999999999 7889999999999976 2 35577777888889998 4688888899999 999999
Q ss_pred chhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccccc
Q psy9807 285 DAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIP 364 (561)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (561)
|++|+... .. ....... ....+.+..++||++......|+++. +.............|
T Consensus 198 De~~~~~~-~~-~~~~~~~-~~~~~i~~~s~sK~~~~G~r~G~~~~-~~~~~~~~~~~~~~~------------------ 255 (367)
T 3euc_A 198 DEAYQPFA-QE-SWMSRLT-DFGNLLVMRTVSKLGLAGIRLGYVAG-DPQWLEQLDKVRPPY------------------ 255 (367)
T ss_dssp ECTTCCSS-SC-CSGGGGG-TCTTEEEEEECCCTTSCSCCEEEEEE-CHHHHHHHGGGCCSS------------------
T ss_pred eCcchhhc-cc-chHHHHh-hCCCEEEEecchhhcccccCceeeee-CHHHHHHHHHhCCCC------------------
Confidence 99998632 11 1111111 11235778899999433355677776 444333221111111
Q ss_pred CcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHH
Q psy9807 365 LGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWF 443 (561)
Q Consensus 365 ~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~ 443 (561)
+ ...+..+++...+. .+.++++.++..++.+++.+.|+++|++++. ++..+.+.++
T Consensus 256 -~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~------------------- 312 (367)
T 3euc_A 256 -N--VNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLAR------------------- 312 (367)
T ss_dssp -C--CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEE-------------------
T ss_pred -C--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEE-------------------
Confidence 0 12233333333332 4567888999999999999999999998854 3333333322
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeee--ECC
Q psy9807 444 VLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSK--IRD 521 (561)
Q Consensus 444 ~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~--~~g 521 (561)
+. ...++.+.|.+.|.....+.. ..+
T Consensus 313 ------------------------------------------------~~----~~~~l~~~l~~~gi~v~~~~~~~~~~ 340 (367)
T 3euc_A 313 ------------------------------------------------VP----DAAQTFDRLLARKVLIKNVSKMHPLL 340 (367)
T ss_dssp ------------------------------------------------CS----CHHHHHHHHHTTTEECEECGGGCGGG
T ss_pred ------------------------------------------------CC----CHHHHHHHHHHCCeEEEECCccCCCC
Confidence 11 134677888888755443322 123
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 522 VYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 522 ~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
..++|+++. +++|+++++++|+++.
T Consensus 341 ~~~iRis~~----~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 341 ANCLRVTVS----TPEENAQFLEAFAASL 365 (367)
T ss_dssp TTEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred CCEEEEecC----CHHHHHHHHHHHHHHh
Confidence 468999954 7789999999998764
No 97
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.81 E-value=9.5e-18 Score=177.10 Aligned_cols=315 Identities=10% Similarity=0.050 Sum_probs=198.6
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
..++++.+.+|+.+.+|.+.. .+....++|+|||+++..++.+..+. ++++++....
T Consensus 85 ~~~lr~~la~~~~~~~g~~~~-----~~~~~i~~~~G~~~ai~~~~~~~~~~-----------------gd~Vl~~~p~y 142 (428)
T 1iay_A 85 LPEFRKAIAKFMEKTRGGRVR-----FDPERVVMAGGATGANETIIFCLADP-----------------GDAFLVPSPYY 142 (428)
T ss_dssp CHHHHHHHHHHHHHHTTTCSC-----CCTTSCEEEEHHHHHHHHHHHHHCCT-----------------TCEEEEESSCC
T ss_pred cHHHHHHHHHHHHHhcCCCCC-----CChhhEEEccChHHHHHHHHHHhCCC-----------------CCeEEEccCCC
Confidence 678999999999998885310 00125789999999987777664211 2345555444
Q ss_pred chHHHHH-HhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhc
Q psy9807 206 TELEVVM-LDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQK 278 (561)
Q Consensus 206 ~s~~kaa-~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~ 278 (561)
.+...++ ...|.+++.+|. . ++.+|+++|++++++ ....+..+.+|+++..++.||.+.| +++|+++|++|
T Consensus 143 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~ 220 (428)
T 1iay_A 143 PAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYEN--AQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQH 220 (428)
T ss_dssp TTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHH--HHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTT
T ss_pred cchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHH--HHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHC
Confidence 4455544 467888999987 2 347899999999976 4444446777787888888999999 99999999999
Q ss_pred CceEEechhcccccccCccccccccCccc-------cc--eeeecCCccccccc-cceeEEecChhhHHHhhccCCCccc
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYLMKGVEL-------AD--SFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLK 348 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~~~gi~~-------aD--si~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~ 348 (561)
|+++++|++|++.............-... +| .+..++||+++.|. .+|+++..++..+.........|
T Consensus 221 ~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~-- 298 (428)
T 1iay_A 221 NIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFG-- 298 (428)
T ss_dssp TCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTS--
T ss_pred CeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhcc--
Confidence 99999999998743321111111100111 47 77899999997553 36888886554433221110000
Q ss_pred cCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceee
Q psy9807 349 HDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-----VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 423 (561)
Q Consensus 349 ~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-----~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f 423 (561)
+ ...+...++...+. .+.+++..++..++.+++.+.|++. ++++..+...+.+.+
T Consensus 299 -----------------~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~ 358 (428)
T 1iay_A 299 -----------------L--VSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAGLFCWM 358 (428)
T ss_dssp -----------------C--CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSSEEEE
T ss_pred -----------------c--CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEE
Confidence 0 11222222333332 2356778888889999999999988 777654434444444
Q ss_pred ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHH
Q psy9807 424 RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLL 503 (561)
Q Consensus 424 ~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~ 503 (561)
++.+... ........++.
T Consensus 359 ~~~~~~~--------------------------------------------------------------~~~~~~~~~l~ 376 (428)
T 1iay_A 359 DLRPLLR--------------------------------------------------------------ESTFDSEMSLW 376 (428)
T ss_dssp ECGGGCS--------------------------------------------------------------SSSHHHHHHHH
T ss_pred echhhcC--------------------------------------------------------------CCchhHHHHHH
Confidence 4322100 00011234678
Q ss_pred HHHHhC-CcEEEEeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 504 KRINGN-GKIHLVPSKIR--DVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 504 ~~L~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
+.|.++ |..+..+.... +..++|+++. .+++++++++++.|+++.+
T Consensus 377 ~~l~~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 377 RVIINDVKLNVSPGSSFECQEPGWFRVCFA--NMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp HHHHHTSCEECEEGGGGTCSSSSEEEEECS--SSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEeCchhhCCCCCCEEEEEEe--cCCHHHHHHHHHHHHHHHh
Confidence 888876 64443322221 2458999976 3588999999999987653
No 98
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.81 E-value=2.9e-18 Score=180.40 Aligned_cols=235 Identities=13% Similarity=0.057 Sum_probs=148.3
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE 207 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s 207 (561)
...+++.+++++++|.+ ..+||+|||+||..++.++.. + ++++++.... .+
T Consensus 56 ~~~~~l~~~la~~~g~~-----------~~~~~~~gt~a~~~al~~l~~----------~-------gd~vi~~~~~~~~ 107 (412)
T 2cb1_A 56 PTAKALEERLKALEGAL-----------EAVVLASGQAATFAALLALLR----------P-------GDEVVAAKGLFGQ 107 (412)
T ss_dssp HHHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHTTCC----------T-------TCEEEEETTCCHH
T ss_pred hHHHHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHHHHhC----------C-------CCEEEEeCCCchh
Confidence 34455666778888875 369999999999888765411 0 1244444444 34
Q ss_pred HHHHH----HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEE
Q psy9807 208 LEVVM----LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 208 ~~kaa----~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lh 283 (561)
..... ...|.+++.+|. |+++|+++|.+ .+.+|+++..++.+|.+.|+++|+++|++||+++|
T Consensus 108 ~~~~~~~~~~~~g~~~~~~~~-----~~~~l~~~i~~--------~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li 174 (412)
T 2cb1_A 108 TIGLFGQVLSLMGVTVRYVDP-----EPEAVREALSA--------KTRAVFVETVANPALLVPDLEALATLAEEAGVALV 174 (412)
T ss_dssp HHHHHHHTTTTTTCEEEEECS-----SHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHcCCEEEEECC-----CHHHHHHHhcc--------CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEE
Confidence 44443 345777888873 48899988866 57788889999999999999999999999999999
Q ss_pred echhcccc-cccCccccccccCccccceeeecCCcccccccc-ceeEEecChhh-HHHhhccCCCccccC-------CCC
Q psy9807 284 VDAAYAGS-AFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKDPSW-VVNAFNVDPLYLKHD-------QQG 353 (561)
Q Consensus 284 VDaA~gg~-~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~~~~-l~~~~~~~~~yl~~~-------~~~ 353 (561)
+|++|+.+ ....+ .. ..+|+++.++||++++|.+ .|.+++.+... ........++..... ...
T Consensus 175 ~D~~~~~~~~~~~~----~~---~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 247 (412)
T 2cb1_A 175 VDNTFGAAGALCRP----LA---WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARC 247 (412)
T ss_dssp EECGGGTTTTSCCG----GG---GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGH
T ss_pred EECCCccccccCCc----cc---cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHH
Confidence 99999865 22221 11 1359999999999999887 77777765321 000000000000000 000
Q ss_pred CCCCCCccc-ccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 354 SAPDYRHWQ-IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 354 ~~~~~~~~~-~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
.....+... ...+....+...|..+..+ +.+.+++++..++++++.+.|.+.|+++++
T Consensus 248 ~~~~~r~~~~~~~g~~~~~~~a~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v 306 (412)
T 2cb1_A 248 FPERVRTLGLSLCGMALSPFNAYLLFQGL--ETVALRVARMSETARFLAERLQGHPKVKAL 306 (412)
T ss_dssp HHHHHHHHHTTTTCCCCCHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTCSEE
T ss_pred HHHHHHHHHHHhcCCCCChHHhHHHHcCC--chHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 000000000 0011123445555544433 345667778889999999999999898855
No 99
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.81 E-value=1.5e-18 Score=182.17 Aligned_cols=269 Identities=12% Similarity=0.045 Sum_probs=173.8
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCC-CeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~-~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
+.+.+...++.....|...+...++++.+.+|+.+.+|.+.. .. ..++|+|||+|+..++.+....
T Consensus 43 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~-------~~~~v~~t~g~~~al~~~~~~~~~~------ 109 (411)
T 2o0r_A 43 MLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYD-------PETEVLVTVGATEAIAAAVLGLVEP------ 109 (411)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC-------TTTSEEEEEHHHHHHHHHHHHHCCT------
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC-------CCceEEEeCCHHHHHHHHHHHhcCC------
Confidence 334444444432334544445678999999999999886522 12 5799999999998877664210
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C---CCccChhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E---FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~---~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
++++++.... .++..++...|.+++.+|. . ++.+|+++|+++|.+ .+.+|+++..+
T Consensus 110 -----------gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~--------~~~~v~l~~~~ 170 (411)
T 2o0r_A 110 -----------GSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTP--------RTRALIINSPH 170 (411)
T ss_dssp -----------TCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCT--------TEEEEEEESSC
T ss_pred -----------CCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhcc--------CceEEEEeCCC
Confidence 2345555444 6777778888999999998 3 367999999999866 56778888888
Q ss_pred CCCccccC---HHHHHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCcccccc-ccceeEEecCh
Q psy9807 260 TNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVT-FDCSAMWLKDP 333 (561)
Q Consensus 260 t~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~ 333 (561)
+.+|.+-| +++|+++|++||+++++|++|+++.......... +.+....|.++.++||+++.| .-+|+++++ +
T Consensus 171 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~ 249 (411)
T 2o0r_A 171 NPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP-A 249 (411)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECC-H
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeC-H
Confidence 89999866 5999999999999999999998654321111111 111234699999999988743 227888874 4
Q ss_pred hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 334 SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
..... +.....+.. ++ .+ ......+..+++. +.+.++++.++..++.+++.+.|++. ++++.
T Consensus 250 ~~~~~-l~~~~~~~~------------~~--~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 311 (411)
T 2o0r_A 250 ELIAG-VRAAKQYLS------------YV--GG-APFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEI-GFAVH 311 (411)
T ss_dssp HHHHH-HHHHHHHHT------------SC--CC-TTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEC
T ss_pred HHHHH-HHHHHhhcc------------CC--CC-hHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CCEec
Confidence 33322 211000000 00 00 1112222333432 36678888889999999999999987 88876
Q ss_pred ccccccceeeec
Q psy9807 414 YEVLMGLVCFRL 425 (561)
Q Consensus 414 ~~~~~~~v~f~~ 425 (561)
.+.....+.+++
T Consensus 312 ~~~~g~~~~~~~ 323 (411)
T 2o0r_A 312 DSYGTYFLCADP 323 (411)
T ss_dssp CCCBSSEEEEEC
T ss_pred CCCeeEEEEEec
Confidence 543333444443
No 100
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.81 E-value=9.2e-18 Score=175.48 Aligned_cols=299 Identities=11% Similarity=-0.014 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
...++.+.+++++|.++ .++.++|+.+|..++.+.... .+ ++.+++.... .+.
T Consensus 92 ~~~~l~~~la~~~~~~~-----------~i~~~sG~~a~~~~~~~l~~~--------~~-------gd~Vl~~~~~~~~~ 145 (401)
T 2bwn_A 92 YHRRLEAEIAGLHQKEA-----------ALVFSSAYNANDATLSTLRVL--------FP-------GLIIYSDSLNHASM 145 (401)
T ss_dssp HHHHHHHHHHHHTTCSE-----------EEEESCHHHHHHHHHHHHHHH--------ST-------TCEEEEETTCCHHH
T ss_pred HHHHHHHHHHHHhCCCc-----------EEEECCcHHHHHHHHHHHhcC--------CC-------CCEEEECchhhHHH
Confidence 44455666777788653 255566777887776653221 00 1234444444 677
Q ss_pred HHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhc
Q psy9807 209 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAY 288 (561)
Q Consensus 209 ~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~ 288 (561)
..+++..|.+++.+|.+ |+++|++.+++ ... ..+.+|+.+..++.+|.+.|+++|+++|++||+++++|++|
T Consensus 146 ~~~~~~~g~~~~~v~~~----d~~~le~~l~~--~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~ 217 (401)
T 2bwn_A 146 IEGIKRNAGPKRIFRHN----DVAHLRELIAA--DDP--AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVH 217 (401)
T ss_dssp HHHHHHSCCCEEEECTT----CHHHHHHHHHH--SCT--TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHcCCeEEEEcCC----CHHHHHHHHHh--hcc--CCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccc
Confidence 77788889999999853 78999999875 211 15678999999999999999999999999999999999999
Q ss_pred ccccccCccccccc--cCc-cccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccC
Q psy9807 289 AGSAFICPENRYLM--KGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPL 365 (561)
Q Consensus 289 gg~~~~~~~~~~~~--~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (561)
+.+.. .+...... .++ +..|.+..+++|+++.|. |.+.. +.............|.... .
T Consensus 218 ~~g~~-~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G--G~~~~-~~~~~~~l~~~~~~~~~~~--------------~ 279 (401)
T 2bwn_A 218 AVGMY-GPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG--GYIAA-SARMVDAVRSYAPGFIFST--------------S 279 (401)
T ss_dssp TTTTS-STTSCCHHHHHTCGGGCSEEEEESSSTTCSCC--EEEEE-CHHHHHHHHHHCHHHHTSB--------------C
T ss_pred ccccc-CCCCceeeeccCccccCcEEEeechhhccCCC--CEEec-CHHHHHHHHHhCcCceecC--------------C
Confidence 84322 22221111 122 235888899999998654 55555 4433322111111111100 0
Q ss_pred cCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHH
Q psy9807 366 GRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVL 445 (561)
Q Consensus 366 sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~ 445 (561)
.-......+..+++.+...+++++.++..++++++.+.|++. +++++.+ ..+++.|++.
T Consensus 280 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~------------------- 338 (401)
T 2bwn_A 280 LPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIIDH-GSHIVPVVIG------------------- 338 (401)
T ss_dssp CCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCC-SSSCEEEECC-------------------
T ss_pred CCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccCC-CCCeEEEEeC-------------------
Confidence 011233444566666666677888999999999999999987 7776643 3445444321
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHH-hCCcEEEEeee----EC
Q psy9807 446 RLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRIN-GNGKIHLVPSK----IR 520 (561)
Q Consensus 446 ~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~----~~ 520 (561)
.+....++.+.|. +.|... .+.. ..
T Consensus 339 -------------------------------------------------~~~~~~~~~~~L~~~~gi~v-~~~~~~~~~~ 368 (401)
T 2bwn_A 339 -------------------------------------------------DPVHTKAVSDMLLSDYGVYV-QPINFPTVPR 368 (401)
T ss_dssp -------------------------------------------------CHHHHHHHHHHHHHHHCEEC-CEECTTTSCT
T ss_pred -------------------------------------------------ChHHHHHHHHHHHhcCCEEE-eecCCCCCCC
Confidence 1122346777885 556443 3322 12
Q ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 521 DVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 521 g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+..++|+++.. .++++|+++++++|+++.++
T Consensus 369 ~~~~iRis~~~-~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 369 GTERLRFTPSP-VHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp TCCEEEECCCT-TSCHHHHHHHHHHHHHHC--
T ss_pred CCceEEEEeeC-CCCHHHHHHHHHHHHHHHHh
Confidence 44689999764 56889999999999887654
No 101
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.80 E-value=2.8e-18 Score=178.19 Aligned_cols=316 Identities=10% Similarity=0.020 Sum_probs=195.1
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+...+.. ...|...+...++++.+ ++++|.+++ ..++|+|||+|+..++.+....
T Consensus 43 v~~a~~~~~~~-~~~y~~~~~~~~l~~~l----a~~~~~~~~---------~v~~~~g~~~a~~~~~~~~~~~------- 101 (381)
T 1v2d_A 43 LLEAVRRALGR-QDQYAPPAGLPALREAL----AEEFAVEPE---------SVVVTSGATEALYVLLQSLVGP------- 101 (381)
T ss_dssp HHHHHHHHTTT-SCSCCCTTCCHHHHHHH----HHHHTSCGG---------GEEEESSHHHHHHHHHHHHCCT-------
T ss_pred HHHHHHHHHHH-hcCCCCCCCCHHHHHHH----HHhcCCChh---------hEEEcCChHHHHHHHHHHhCCC-------
Confidence 33444444443 22343333445555554 555777654 5799999999998887664210
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeCC----CCccChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPKE----FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~~----~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
++++++.... .++..+++..|.+++.+|.+ ++.+|+++|++++.+ .+.+|+++..++
T Consensus 102 ----------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~~~n 163 (381)
T 1v2d_A 102 ----------GDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTP--------RTRALLLNTPMN 163 (381)
T ss_dssp ----------TCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCT--------TEEEEEEESSCT
T ss_pred ----------CCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCc--------CCEEEEECCCCC
Confidence 1245554444 67777778888999888873 468999999998865 577788888888
Q ss_pred CCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhH
Q psy9807 261 NCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWV 336 (561)
Q Consensus 261 ~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l 336 (561)
.||.+-| +++|+++|++||+++++|++|++... .........-....|.++.++||+++.| ..+|++++++. .+
T Consensus 164 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~ 241 (381)
T 1v2d_A 164 PTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE-FM 241 (381)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTT-TH
T ss_pred CCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHH-HH
Confidence 9999865 89999999999999999999986543 2111111110124599999999998744 23888888543 22
Q ss_pred HHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 337 VNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
.. +.....+. .++ .+ ......+..+++... .++++++.++..++++++.+.|++. ++++..+
T Consensus 242 ~~-~~~~~~~~------------~~~--~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 304 (381)
T 1v2d_A 242 PR-LAGMRQWT------------SFS--AP-TPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYVP 304 (381)
T ss_dssp HH-HHHHHHHH------------TSS--CC-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEECC
T ss_pred HH-HHHHHhhc------------ccC--CC-cHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecCC
Confidence 21 11100000 000 00 011112222333221 4567788889999999999999985 8887755
Q ss_pred ccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC
Q psy9807 416 VLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP 495 (561)
Q Consensus 416 ~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~ 495 (561)
.....+.++ +.+.
T Consensus 305 ~~~~~~~~~-------------------------------------------------------------------~~~~ 317 (381)
T 1v2d_A 305 EGTYFLMAE-------------------------------------------------------------------LPGW 317 (381)
T ss_dssp SBSSEEEEE-------------------------------------------------------------------CTTC
T ss_pred CcceEEEEe-------------------------------------------------------------------cChH
Confidence 333332222 2111
Q ss_pred cHHHHHHHHHHHhCCcEEEEeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 496 NEINEKLLKRINGNGKIHLVPSKI----RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 496 ~~~~~~l~~~L~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
+ +.+.+.+.|.....+... .+..++|+++.. ++++++++++.|.++.++..
T Consensus 318 ~-----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~---~~~~i~~~~~~l~~~l~~~r 372 (381)
T 1v2d_A 318 D-----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK---TEEELHLALERLGRVVNSPR 372 (381)
T ss_dssp C-----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS---CHHHHHHHHHHHHHHC----
T ss_pred h-----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC---CHHHHHHHHHHHHHHHhhcc
Confidence 1 445566667554433222 135689999764 78899999999988866543
No 102
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.80 E-value=4.6e-18 Score=178.70 Aligned_cols=320 Identities=11% Similarity=-0.005 Sum_probs=198.9
Q ss_pred cccChhhHHHHHHHHHHHHHhc------CCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy9807 121 WIASPACTELEVVMLDWLGKML------DLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSD 194 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~------g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~ 194 (561)
|...+...++++.+.+|+.+.+ |.+-. ....++|+|||+++..++.+... +
T Consensus 71 y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~-------~~~v~~~~g~~~al~~~~~~l~~----------~------ 127 (416)
T 1bw0_A 71 YFPTVGSPEAREAVATWWRNSFVHKEELKSTIV-------KDNVVLCSGGSHGILMAITAICD----------A------ 127 (416)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCC-------GGGEEEESHHHHHHHHHHHHHCC----------T------
T ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCC-------cceEEEeCChHHHHHHHHHHhCC----------C------
Confidence 4333456788898988888432 32211 12579999999998777765421 0
Q ss_pred cccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---
Q psy9807 195 IIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC--- 267 (561)
Q Consensus 195 ~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp--- 267 (561)
++++++.... .++..++...|.+++.+|. . ++.+|+++|++++.+ .+.+|+.+...+.||.+.|
T Consensus 128 -gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--------~~~~v~i~~p~nptG~~~~~~~ 198 (416)
T 1bw0_A 128 -GDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD--------KTKLLIVTNPSNPCGSNFSRKH 198 (416)
T ss_dssp -TCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHH
T ss_pred -CCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhcc--------CCeEEEEeCCCCCCCcccCHHH
Confidence 2345555444 6677778888999999987 3 467999999999876 4566777778889999998
Q ss_pred HHHHHHHHhhcCceEEechhcccccccCcc----ccccccCccc--cceeeecCCcccccc-ccceeEEecCh-hhHHHh
Q psy9807 268 LEEIGQVCRQKDVWLHVDAAYAGSAFICPE----NRYLMKGVEL--ADSFNFNPHKWMLVT-FDCSAMWLKDP-SWVVNA 339 (561)
Q Consensus 268 l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~----~~~~~~gi~~--aDsi~~~~HK~l~~P-~g~g~l~~r~~-~~l~~~ 339 (561)
+++|+++|++||+++++|++|+... +... ....+..+.. -+.+..++||+++.| ..+|.+++++. ..+...
T Consensus 199 l~~i~~~~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~ 277 (416)
T 1bw0_A 199 VEDIVRLAEELRLPLFSDEIYAGMV-FKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSF 277 (416)
T ss_dssp HHHHHHHHHHHTCCEEEECTTTTCB-CCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHH
T ss_pred HHHHHHHHHHcCCEEEEEccccccc-cCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHH
Confidence 9999999999999999999998632 2211 0111222211 135677999998766 34788888764 221111
Q ss_pred hccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccccc
Q psy9807 340 FNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 419 (561)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~ 419 (561)
......+.... ++ .-......+..+++.....+++++.++..++.+++.+.|++.|++++..+....
T Consensus 278 ~~~~~~~~~~~----------~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 344 (416)
T 1bw0_A 278 LEGLKRVGMLV----------CG---PCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAM 344 (416)
T ss_dssp HHHHHHHHHHH----------TC---SCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTT
T ss_pred HHHHHHHhccc----------cC---CCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeE
Confidence 00000000000 00 000112222333443346788889999999999999999998898876554344
Q ss_pred ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHH
Q psy9807 420 LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEIN 499 (561)
Q Consensus 420 ~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~ 499 (561)
.+.+++.... + +.....
T Consensus 345 ~~~~~~~~~~------------------------------------------------------------~---~~~~~~ 361 (416)
T 1bw0_A 345 YLMSRIDLEK------------------------------------------------------------Y---RDIKTD 361 (416)
T ss_dssp EEEEEECGGG------------------------------------------------------------B---SSCCSH
T ss_pred EEEEeCCHHH------------------------------------------------------------c---CCCCCH
Confidence 4343332100 0 000013
Q ss_pred HHHHHHHH-hCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 500 EKLLKRIN-GNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 500 ~~l~~~L~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.++.+.|. +.|..+..+.......++|++++ +++++++++++.|.++.++
T Consensus 362 ~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~---~~~e~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 362 VEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT---RPVEVYREAVERIKAFCQR 412 (416)
T ss_dssp HHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEecccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence 46777774 66755544333333458999974 4788999999988877654
No 103
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.80 E-value=3.2e-18 Score=179.15 Aligned_cols=216 Identities=13% Similarity=0.085 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
.....++.+++++++|.+ ..+++++||+|+..++.+.... ++++++.... .
T Consensus 63 ~~~~~~l~~~la~~~g~~-----------~~i~~~sG~~a~~~~l~~~~~~-----------------gd~vi~~~~~~~ 114 (398)
T 2rfv_A 63 NPTTDALEKKLAVLERGE-----------AGLATASGISAITTTLLTLCQQ-----------------GDHIVSASAIYG 114 (398)
T ss_dssp CHHHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHCCT-----------------TCEEEEESSSCH
T ss_pred ChHHHHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHHHHhCC-----------------CCEEEEcCCCcc
Confidence 345566777888888875 2488888999998887764210 1244554444 4
Q ss_pred hHHHHH----HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceE
Q psy9807 207 ELEVVM----LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWL 282 (561)
Q Consensus 207 s~~kaa----~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~l 282 (561)
+...++ ...|.+++.+|. .|+++|+++|++ .+.+|+++..++.+|.+.|+++|+++|++||+++
T Consensus 115 ~~~~~~~~~~~~~g~~~~~v~~----~d~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l 182 (398)
T 2rfv_A 115 CTHAFLSHSMPKFGINVRFVDA----AKPEEIRAAMRP--------ETKVVYIETPANPTLSLVDIETVAGIAHQQGALL 182 (398)
T ss_dssp HHHHHHHTHHHHTTCEEEEECT----TSHHHHHHHCCT--------TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEE
T ss_pred cHHHHHHHHHHHcCCEEEEeCC----CCHHHHHHhcCC--------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEE
Confidence 555544 567888888884 389999998876 5778888999999999999999999999999999
Q ss_pred EechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCCCCCCc
Q psy9807 283 HVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRH 360 (561)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (561)
|+|++|+.+....+. . . .+|+++.++||+++.|.+ +|+++.++. .+...+. .+.....
T Consensus 183 i~De~~~~~~~~~~~----~--~-~~di~~~s~sK~~~~~g~~~~G~~~~~~~-~~~~~~~---~~~~~~~--------- 242 (398)
T 2rfv_A 183 VVDNTFMSPYCQQPL----Q--L-GADIVVHSVTKYINGHGDVIGGIIVGKQE-FIDQARF---VGLKDIT--------- 242 (398)
T ss_dssp EEECTTTCTTTCCGG----G--G-TCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHH---THHHHTT---------
T ss_pred EEECCCcccccCCch----h--h-CCcEEEEeCcccccCCCCceEEEEEECHH-HHHHHHH---HHHHhCC---------
Confidence 999999855432221 1 1 359999999999998887 688877543 3321121 0110000
Q ss_pred ccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 361 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 361 ~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
+-....+..|+.++.+. .+..++++..++++++.+.+++.+.+
T Consensus 243 -----~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~v 285 (398)
T 2rfv_A 243 -----GGCMSPFNAWLTLRGVK--TLGIRMERHCENALKIARFLEGHPSI 285 (398)
T ss_dssp -----CCCCCHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred -----CCCCCHHHHHHHHhhhh--hHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 00123344555555442 24555667777888888988887544
No 104
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.80 E-value=5.6e-18 Score=174.21 Aligned_cols=327 Identities=11% Similarity=0.019 Sum_probs=191.0
Q ss_pred CccccccCCCCCChHHHHHHHHHhhc-cccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHH
Q psy9807 89 SPKFHAYFPTANSYPAIVADILSDSI-ACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 167 (561)
Q Consensus 89 ~p~~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~a 167 (561)
+..|++.-+. +..+..+.+++.... ......|..+|...++++ ++++++|.+. .++++|||+|
T Consensus 11 ~~~~l~~~~~-p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~----~la~~~~~~~-----------~i~~~~G~~a 74 (357)
T 3lws_A 11 QTTGQISGHG-KRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQ----KFADVLGMDD-----------AVFFPSGTMA 74 (357)
T ss_dssp TCSEESSBSS-CCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHH----HHHHHHTCSE-----------EEEESCHHHH
T ss_pred hhcccccCCC-CCCHHHHHHHHHHhhcccCcccccCChHHHHHHH----HHHHHhCCCc-----------EEEecCcHHH
Confidence 4456666643 444555555554321 112223444566555655 6677778753 4888999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccccc-eEEeccc--chHHH---HHHhccCCeEEeeCCCCccChhhHHHHHhhh
Q psy9807 168 TLVALLGAKAKTMQRVKEAHPDWKDSDIIAN-LIASPAC--TELEV---VMLDWLGKMLDLPKEFLACSGGKGGGVIQRK 241 (561)
Q Consensus 168 nl~al~~ar~~~~~~~~~~~~~~~~~~~~~~-~vv~~s~--~s~~k---aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~ 241 (561)
|..++.+.... +++ .++.... ++... .+...|.+++.+|.+++.+|+++|+++.
T Consensus 75 ~~~al~~~~~~-----------------gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~--- 134 (357)
T 3lws_A 75 QQVALRIWSDE-----------------TDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGAADRLMTLDEIKALP--- 134 (357)
T ss_dssp HHHHHHHHHHH-----------------HTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSCTTSCCCHHHHHTCC---
T ss_pred HHHHHHHHhhc-----------------CCCcEEEecccceeeeeccchhhhccCcEEEEecCCCCCcCHHHHhcCc---
Confidence 98887765433 112 4444332 23322 3455677888887766789999998762
Q ss_pred chhhcCCceEEEEEecCCCCC-ccccC---HHHHHHHHhhcCceEEechhcccccc--cCccccccccCccccceeeecC
Q psy9807 242 SDREMCSDLLQVVATLGTTNC-CAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAF--ICPENRYLMKGVELADSFNFNP 315 (561)
Q Consensus 242 ~~~~~g~~p~~vv~t~gtt~t-G~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~--~~~~~~~~~~gi~~aDsi~~~~ 315 (561)
+ +.+|+++..++.+ |.+.| +++|+++|++||+|+|+|+||+.... ......... +.+|+++.++
T Consensus 135 -~------~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~ 204 (357)
T 3lws_A 135 -D------IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLFDSIYISF 204 (357)
T ss_dssp -S------CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTSSEEEEES
T ss_pred -C------cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcCCEEEEec
Confidence 1 3355555555555 87764 99999999999999999999862111 111111111 2358999999
Q ss_pred CccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHH
Q psy9807 316 HKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQIS 395 (561)
Q Consensus 316 HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~ 395 (561)
||++++|.| |+++. ++..+.........+ . +.. +....+.. .++..+ +.+.+.+++..+
T Consensus 205 sK~~~~~~g-g~~~~-~~~~~~~~~~~~~~~-~----~~~-----------~~~~~~~~-~~~~~l--~~~~~~~~~~~~ 263 (357)
T 3lws_A 205 YKGLGGIAG-AILAG-PAAFCQTARIWKRRY-G----GDL-----------ISLYPYIV-SADYYY--ELRKDRMGQYYE 263 (357)
T ss_dssp SSTTCCSSC-EEEEE-CHHHHHHHHHHHHHT-T----CCC-----------SCCHHHHH-HHHHHH--HHHTTCHHHHHH
T ss_pred cccCCCCce-EEEEc-CHHHHHHHHHHHHHh-c----CCc-----------ccchHHHH-HHHHHH--HHHHHHHHHHHH
Confidence 999988887 66554 554443321110000 0 000 00111111 111111 113344555677
Q ss_pred HHHHHHHHHhcCCCeEEe-ccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccC
Q psy9807 396 LAKEFEQLVRSDDRFEVI-YEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 474 (561)
Q Consensus 396 la~~l~~~l~~~~g~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~ 474 (561)
+++++.+.|+++|++++. .++..+.+.+++.+
T Consensus 264 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~----------------------------------------------- 296 (357)
T 3lws_A 264 QAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDG----------------------------------------------- 296 (357)
T ss_dssp HHHHHHHHHHTSTTEEEESSSCSSSEEEEEEES-----------------------------------------------
T ss_pred HHHHHHHHHHhCCCCeeccCCCcceEEEEEecC-----------------------------------------------
Confidence 889999999999999985 46666665554422
Q ss_pred chhhhhhhhhhcceeeecCCCc-HHHHHHHHHHHhCCcEEEEeee-ECCEEEEEEEecCCC--CCHHHHHHHHHHHHHH
Q psy9807 475 DRFEVIYEVLMGLVCFRLKGPN-EINEKLLKRINGNGKIHLVPSK-IRDVYFLRMAVCSRY--SESSDMIYSWNEIKTL 549 (561)
Q Consensus 475 ~~~~~~~~~~~~~v~f~~~~~~-~~~~~l~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~--t~~~di~~l~~~l~~~ 549 (561)
.. ....++.+.|.+.|..+..+.. ..+..++|+++...+ .+++++++.++.|.++
T Consensus 297 --------------------~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 297 --------------------QAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQA 355 (357)
T ss_dssp --------------------CHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHH
T ss_pred --------------------ChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHh
Confidence 11 1134677888888754432211 146779999987543 5677777777776653
No 105
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.80 E-value=3.7e-18 Score=176.76 Aligned_cols=307 Identities=9% Similarity=-0.013 Sum_probs=193.9
Q ss_pred ccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy9807 116 CIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDI 195 (561)
Q Consensus 116 ~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~ 195 (561)
.....|...+...++++.+.+|+. +.+++ ..++|+|||+|+..++.+....
T Consensus 54 ~~~~~y~~~~g~~~l~~~la~~~~---~~~~~---------~v~~~~g~~~a~~~~~~~l~~~----------------- 104 (375)
T 3op7_A 54 GTKLNYGWIEGSPAFKKSVSQLYT---GVKPE---------QILQTNGATGANLLVLYSLIEP----------------- 104 (375)
T ss_dssp TSCCSSCCTTCCHHHHHHHHTTSS---SCCGG---------GEEEESHHHHHHHHHHHHHCCT-----------------
T ss_pred cCCcCCCCCCChHHHHHHHHHHhc---cCChh---------hEEEcCChHHHHHHHHHHhcCC-----------------
Confidence 333445455555677776655432 34443 5799999999998877654211
Q ss_pred ccceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---H
Q psy9807 196 IANLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---L 268 (561)
Q Consensus 196 ~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l 268 (561)
++.+++.... .+...++...|.+++.+|. +++.+|+++|++++.+ .+.+|+++...+.+|.+.| +
T Consensus 105 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~~~nptG~~~~~~~l 176 (375)
T 3op7_A 105 GDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP--------TTKMICINNANNPTGAVMDRTYL 176 (375)
T ss_dssp TCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT--------TCCEEEEESSCTTTCCCCCHHHH
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc--------CCeEEEEcCCCCCCCCCCCHHHH
Confidence 2345554444 6677777888999999887 3456899999999976 4667788888899999999 9
Q ss_pred HHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCcc
Q psy9807 269 EEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYL 347 (561)
Q Consensus 269 ~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl 347 (561)
++|+++|++||+++++|++|+..... + ..... .....+.+..+++|+++.| ..+|++.. ++..... +.....+.
T Consensus 177 ~~i~~la~~~~~~li~De~~~~~~~~-~-~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~-~~~~~~~~ 251 (375)
T 3op7_A 177 EELVEIASEVGAYILSDEVYRSFSEL-D-VPSII-EVYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDI-LRDYRDYT 251 (375)
T ss_dssp HHHHHHHHTTTCEEEEECCSCCCSSS-C-CCCHH-HHCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHHHH-HTTTGGGT
T ss_pred HHHHHHHHHcCCEEEEEccccccccc-C-CCchh-hhcCCEEEEeEChhhcCCcccceEEEEe-CHHHHHH-HHHHHhhh
Confidence 99999999999999999999864332 1 11111 1112357788999999844 44677776 5544332 22111110
Q ss_pred ccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeec
Q psy9807 348 KHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL 425 (561)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~ 425 (561)
+ -....+..+++...+ ....++++.++..++++++.+.|++.|++++..+.....+.+.+
T Consensus 252 --------------~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 313 (375)
T 3op7_A 252 --------------M----ICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKI 313 (375)
T ss_dssp --------------T----SCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEE
T ss_pred --------------c----cCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEc
Confidence 0 001122222222222 23456667777788999999999998888876554333322221
Q ss_pred ccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHH
Q psy9807 426 KHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKR 505 (561)
Q Consensus 426 ~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~ 505 (561)
. . +. ...++.++
T Consensus 314 ~-----------------------------------------------------------------~-~~--~~~~~~~~ 325 (375)
T 3op7_A 314 A-----------------------------------------------------------------V-DM--PMEDFCLQ 325 (375)
T ss_dssp C-----------------------------------------------------------------C-SS--CHHHHHHH
T ss_pred C-----------------------------------------------------------------C-CC--CHHHHHHH
Confidence 1 0 11 13466777
Q ss_pred HH-hCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 506 IN-GNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 506 L~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+. +.|..+..+.......++|++++. ++++++++++.|.++.+++
T Consensus 326 ll~~~gi~v~~g~~~~~~~~iRi~~~~---~~~~i~~~l~~l~~~l~~~ 371 (375)
T 3op7_A 326 LLQEHGVLLVPGNRFERDGYVRLGFAC---EQETLIKGLEKLSQFLRRF 371 (375)
T ss_dssp HHHHHCEECEEGGGGTCTTEEEECCCS---CHHHHHHHHHHHHHHHGGG
T ss_pred HHHhCCEEEeChhhhCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHH
Confidence 74 667555444333335689998664 3479999999998877654
No 106
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.80 E-value=3.3e-17 Score=170.79 Aligned_cols=251 Identities=11% Similarity=0.055 Sum_probs=153.3
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
+..++...++|+.+ ++++|.+ ..+|+++||+||..++.+++... ..+.. .+++++
T Consensus 30 ~~~~~~~~~l~~~l----a~~~~~~-----------~~i~~~sGt~a~~~al~~~~~~~-------~~~~~---~g~~Vi 84 (390)
T 3b8x_A 30 FTMGEYVKQYETQF----AKTFGSK-----------YAVMVSSGSTANLLMIAALFFTK-------KPRLK---KGDEII 84 (390)
T ss_dssp CSSCHHHHHHHHHH----HHHHTCS-----------EEEEESCHHHHHHHHHHHTTSSS-------SCSCC---TTCEEE
T ss_pred CCCChHHHHHHHHH----HHHHCCC-----------cEEEECCHHHHHHHHHHHHHhhh-------hcCCC---CcCEEE
Confidence 34456666666655 5666664 35999999999988887652100 00000 022444
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
+.... .+...+++..|.+++.+|+ . ++.+|+++|+++|.+ .+.+|+++ +.+|...|+++|+++|++
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~---~~~g~~~~~~~i~~l~~~ 153 (390)
T 3b8x_A 85 VPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTD--------STKAILTV---NLLGNPNNFDEINKIIGG 153 (390)
T ss_dssp EESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT--------TEEEEEEE---CGGGCCCCHHHHHHHHTT
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCc--------CCeEEEEE---CCccChhhHHHHHHHHHH
Confidence 44444 7777788888999999998 4 489999999999976 45666664 357889999999999999
Q ss_pred cCceEEechhcccccccCccccccccCc-cccceeeecCCccccccccceeEEecChhhHHHh--hccCCCcccc-----
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGV-ELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNA--FNVDPLYLKH----- 349 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi-~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~--~~~~~~yl~~----- 349 (561)
||+++|+|+||+.+..... +. .+. ....+++...+|.+++|.| |+++.++....... +... .+...
T Consensus 154 ~~~~li~D~a~~~g~~~~~--~~--~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~-g~~~~~~~~~ 227 (390)
T 3b8x_A 154 RDIILLEDNCESMGATFNN--KC--AGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAH-GWTRNLPKKN 227 (390)
T ss_dssp SCCEEEEECTTCTTCEETT--EE--TTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBT-TBSTTSCSEE
T ss_pred cCCEEEEECcCcccCEECC--cc--cccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhc-CCCccccccc
Confidence 9999999999985443321 11 111 1123444444455665655 77777764432211 1111 10000
Q ss_pred -----CCCCCCCCCCccc-ccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 350 -----DQQGSAPDYRHWQ-IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 350 -----~~~~~~~~~~~~~-~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
...........+. .....+...+..+.++.. .+.++++.++..++++++.+.|+++|++++..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 297 (390)
T 3b8x_A 228 KVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ--LKKLPRFISVRRKNAEYFLDKFKDHPYLDVQQE 297 (390)
T ss_dssp TTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCSSEEECCC
T ss_pred cccccccccccccccceeccccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCC
Confidence 0000000000001 111122445666666555 367888999999999999999999999988654
No 107
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.80 E-value=5.1e-18 Score=181.18 Aligned_cols=352 Identities=14% Similarity=0.096 Sum_probs=194.8
Q ss_pred cccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHH
Q psy9807 91 KFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLV 170 (561)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~ 170 (561)
.|++|.++.+. +.+. +.+...++.....|...+...++++ ++++++|.+ ..+||+|||+||..
T Consensus 44 ~ylD~~~~~~~-~~v~-~a~~~~~~~~~~~y~~~~~~~~l~~----~la~~~~~~-----------~v~~t~ggt~A~~~ 106 (467)
T 1ax4_A 44 VYIDLLTDSGT-NAMS-DHQWAAMITGDEAYAGSRNYYDLKD----KAKELFNYD-----------YIIPAHQGRGAENI 106 (467)
T ss_dssp CSEECSCSSSC-CCEE-HHHHHHHHTCCCCSSSCHHHHHHHH----HHHHHHCCC-----------EEEEESSHHHHHHH
T ss_pred eeeecccCcCC-HHHH-HHHHHHHhhcccccccCccHHHHHH----HHHHHcCCC-----------cEEEcCCcHHHHHH
Confidence 47777654433 2222 2222333222234555565555655 556666653 47999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcccccc---eEEecccc-hHHHHHHhccCCeEEeeC-C----------CCccChhhHH
Q psy9807 171 ALLGAKAKTMQRVKEAHPDWKDSDIIAN---LIASPACT-ELEVVMLDWLGKMLDLPK-E----------FLACSGGKGG 235 (561)
Q Consensus 171 al~~ar~~~~~~~~~~~~~~~~~~~~~~---~vv~~s~~-s~~kaa~~~g~~v~~v~~-~----------~g~~d~~~Le 235 (561)
++.+++..... . ++. +++...++ +...++...|.+++.++. . ++.+|+++|+
T Consensus 107 al~~~~~~~~~----~---------Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 173 (467)
T 1ax4_A 107 LFPVLLKYKQK----E---------GKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLK 173 (467)
T ss_dssp HHHHHHHHHHH----T---------TCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHH
T ss_pred HHHHHHHhhcc----C---------CCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHH
Confidence 99887653210 0 123 44442223 334455667777766543 1 4679999999
Q ss_pred HHHhhhchhhcCCceEEEEEecCCCCC-ccc---cCHHHHHHHHhhcCceEEechhccc-ccccCc----ccccc-ccCc
Q psy9807 236 GVIQRKSDREMCSDLLQVVATLGTTNC-CAF---DCLEEIGQVCRQKDVWLHVDAAYAG-SAFICP----ENRYL-MKGV 305 (561)
Q Consensus 236 ~~i~~~~~~~~g~~p~~vv~t~gtt~t-G~i---dpl~eI~~ia~~~~~~lhVDaA~gg-~~~~~~----~~~~~-~~gi 305 (561)
++|.+ .. ..++.+|+++..++.+ |.+ +++++|+++|++||+|+|+|++++. +..+.+ .+... ...+
T Consensus 174 ~~i~~--~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (467)
T 1ax4_A 174 ENIAQ--HG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEV 249 (467)
T ss_dssp HHHHH--HC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHH
T ss_pred HHHHh--cC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhh
Confidence 99976 31 1246778877777777 665 5789999999999999999998654 111110 00000 0011
Q ss_pred -----cccceeeecCCccccccccceeEEecCh-hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcch-HHHHHHH
Q psy9807 306 -----ELADSFNFNPHKWMLVTFDCSAMWLKDP-SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRS-LKLWFVL 378 (561)
Q Consensus 306 -----~~aDsi~~~~HK~l~~P~g~g~l~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~a-l~lw~~l 378 (561)
+.+|++++++||+++.|.| |+++.+++ ............+ .. ...+ ....... ..+..++
T Consensus 250 ~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~-~~-----~~~~------~~~~~~~~~a~~~~l 316 (467)
T 1ax4_A 250 IFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM-EG-----FVTY------GGLAGRDMAAMVQGL 316 (467)
T ss_dssp HHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH-TC-----STTT------TTCCHHHHHHHHHHH
T ss_pred hhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc-cc-----cccc------CCccchHHHHHHHHH
Confidence 3468999999999988754 56656644 4433221111001 00 0000 0111111 1111122
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHH
Q psy9807 379 RLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIR 458 (561)
Q Consensus 379 ~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~ 458 (561)
+..-. ++.+++..++++++.+.|++ +++++..+.....+.++..... +
T Consensus 317 ~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~-~--------------------------- 364 (467)
T 1ax4_A 317 EEGTE---EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLV-P--------------------------- 364 (467)
T ss_dssp HHTTC---HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTC-T---------------------------
T ss_pred HHhhh---hhHHHHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhc-c---------------------------
Confidence 22111 12444555778888999987 5787765544444444321100 0
Q ss_pred HHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHH-HhCCcEEEE-eee------------ECCEEE
Q psy9807 459 KQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRI-NGNGKIHLV-PSK------------IRDVYF 524 (561)
Q Consensus 459 ~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L-~~~g~~~~~-~~~------------~~g~~~ 524 (561)
. ....+....++.++| .+.|..... +.. ..+..+
T Consensus 365 -------------------------~-------~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~ 412 (467)
T 1ax4_A 365 -------------------------Q-------IPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEF 412 (467)
T ss_dssp -------------------------T-------SCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCE
T ss_pred -------------------------c-------cccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccce
Confidence 0 000000134677777 666654433 110 011368
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 525 LRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 525 lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+|+++....++++|++++++.|+++.+++
T Consensus 413 iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 413 MRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp EEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred EEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 99997755578999999999999887653
No 108
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.80 E-value=9.6e-18 Score=175.20 Aligned_cols=306 Identities=11% Similarity=0.022 Sum_probs=192.2
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|...+...++++.+.+|+ |.+++ ..++|+|||+++..++.+... + ++++
T Consensus 69 ~y~~~~~~~~l~~~la~~~----g~~~~---------~v~~~~g~~~al~~~~~~~~~----------~-------gd~V 118 (397)
T 2zyj_A 69 QYSPTEGYAPLRAFVAEWI----GVRPE---------EVLITTGSQQALDLVGKVFLD----------E-------GSPV 118 (397)
T ss_dssp SCCCTTCCHHHHHHHHHHH----TSCGG---------GEEEESHHHHHHHHHHHHHCC----------T-------TCEE
T ss_pred CCCCCCCCHHHHHHHHHHh----CCChh---------hEEEeccHHHHHHHHHHHhCC----------C-------CCEE
Confidence 3433344566777665555 66543 578999999998777665321 0 1245
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEE-EEecCCCCCccccCHH---HHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQV-VATLGTTNCCAFDCLE---EIGQ 273 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~v-v~t~gtt~tG~idpl~---eI~~ 273 (561)
++.... .+...++...|.+++.+|. .++ +|+++|++++++ . .+.+| +.+...+.||.+-|.+ +|++
T Consensus 119 l~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~d~~~l~~~l~~--~-----~~~~v~~~~~~~nptG~~~~~~~l~~l~~ 190 (397)
T 2zyj_A 119 LLEAPSYMGAIQAFRLQGPRFLTVPAGEEG-PDLDALEEVLKR--E-----RPRFLYLIPSFQNPTGGLTPLPARKRLLQ 190 (397)
T ss_dssp EEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHH--C-----CCSCEEECCBSCTTTCCBCCHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHcCCEEEecCcCCCC-CCHHHHHHHHhh--c-----CCeEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence 554444 6677777778899999998 554 999999999965 2 24444 5667778899987754 8999
Q ss_pred HHhhcCceEEechhcccccccCccccccccCcc-----ccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCcc
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE-----LADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYL 347 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~-----~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl 347 (561)
+|++||+++++|++|+........... +..+. .-..+..++||+++ | ..+|+++++ +............+.
T Consensus 191 ~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~-~~~~~~l~~~~~~~~ 267 (397)
T 2zyj_A 191 MVMERGLVVVEDDAYRELYFGEARLPS-LFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAH-PEALQKLVQAKQGAD 267 (397)
T ss_dssp HHHHHTCCEEEECTTTTCBCSSCCCCC-HHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECC-HHHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEeCCcccccCCCCCCCc-hhhhCcccCCCeEEEEeccccccc-ccceeEEEecC-HHHHHHHHHHHHhhc
Confidence 999999999999999865432111111 11111 11377889999999 5 567888885 333322111000000
Q ss_pred ccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh--H-HHHHHHHHHHHHHHHHHHHHHhc-CC-CeEEecccccccee
Q psy9807 348 KHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG--V-KYLQEYIRKQISLAKEFEQLVRS-DD-RFEVIYEVLMGLVC 422 (561)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g--~-~g~~~~~~~~~~la~~l~~~l~~-~~-g~~l~~~~~~~~v~ 422 (561)
. + ...+..+++...+. . +.++++.++..++.+++.+.|++ .| ++++..+.....+.
T Consensus 268 ---------------~--~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~ 328 (397)
T 2zyj_A 268 ---------------L--H--TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVW 328 (397)
T ss_dssp ---------------S--S--CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEE
T ss_pred ---------------C--C--CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEE
Confidence 0 0 01222222333332 1 45777788888899999999987 57 68876554444444
Q ss_pred eecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHH
Q psy9807 423 FRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKL 502 (561)
Q Consensus 423 f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l 502 (561)
+++.+ +.+ ..++
T Consensus 329 ~~~~~------------------------------------------------------------------~~~--~~~~ 340 (397)
T 2zyj_A 329 MELPK------------------------------------------------------------------GLS--AEGL 340 (397)
T ss_dssp EECST------------------------------------------------------------------TCC--HHHH
T ss_pred EEcCC------------------------------------------------------------------CCC--HHHH
Confidence 43311 011 3468
Q ss_pred HHHHHhCCcEEEEeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 503 LKRINGNGKIHLVPSKI----RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 503 ~~~L~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
.+.|.++|..+..+... .+..++|+++..+ ++++++++++.|.++.+++.+
T Consensus 341 ~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~--~~~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 341 FRRALEENVAFVPGGPFFANGGGENTLRLSYATL--DREGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp HHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS--CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC--CHHHHHHHHHHHHHHHHHHHh
Confidence 88888887554433322 1346899997753 788999999999998877653
No 109
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.80 E-value=1.3e-17 Score=174.16 Aligned_cols=308 Identities=7% Similarity=0.044 Sum_probs=194.1
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-cc
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII-AN 198 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~-~~ 198 (561)
.|...+...++.+.+.+|+.+.+|.+-+ ....+||+|||+|+..++.+.... + ++
T Consensus 71 ~y~~~~g~~~lr~~la~~l~~~~g~~~~-------~~~i~~~~g~~~al~~~~~~l~~~-----------------g~d~ 126 (398)
T 3ele_A 71 GYTSAQGDVETRAAIAEFLNNTHGTHFN-------ADNLYMTMGAAASLSICFRALTSD-----------------AYDE 126 (398)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESSHHHHHHHHHHHHCCS-----------------TTCE
T ss_pred CcCCCCCcHHHHHHHHHHHHHHhCCCCC-------hHHEEEccCHHHHHHHHHHHHcCC-----------------CCCE
Confidence 3444445578999999999999886421 126799999999998877664210 2 24
Q ss_pred eEEeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHH
Q psy9807 199 LIASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIG 272 (561)
Q Consensus 199 ~vv~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~ 272 (561)
+++.... .++..++...|.+++.+|. +++.+|+++|++++.+ .+.+|+++...+.||.+-| +++|+
T Consensus 127 vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~p~nptG~~~~~~~l~~l~ 198 (398)
T 3ele_A 127 FITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINA--------HTRGVIINSPNNPSGTVYSEETIKKLS 198 (398)
T ss_dssp EEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCT--------TEEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred EEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCc--------CCCEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 5554444 6777788888999999998 3568999999999876 5677888888899999988 77777
Q ss_pred HHHhh------cCceEEechhcccccccCccccccccCccccceeeecCCcccc-ccccceeEEecChhh----HHHhhc
Q psy9807 273 QVCRQ------KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWML-VTFDCSAMWLKDPSW----VVNAFN 341 (561)
Q Consensus 273 ~ia~~------~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~-~P~g~g~l~~r~~~~----l~~~~~ 341 (561)
++|++ ||+++++|.+|+............ ......+.+..++||+++ ....+|++++++... +...+.
T Consensus 199 ~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 277 (398)
T 3ele_A 199 DLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV-TKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVC 277 (398)
T ss_dssp HHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCG-GGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHH
T ss_pred HHHHhhhhccCCCeEEEEeccccccccCCCCcCCh-HhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHH
Confidence 89999 999999999998643321111111 111223688889999997 445688888865411 111110
Q ss_pred cCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccce
Q psy9807 342 VDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 421 (561)
Q Consensus 342 ~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v 421 (561)
.... .. + .-....+..++....+... ...++..++.+++.+.|++. ++++..+.....+
T Consensus 278 ~~~~---~~--~------------~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 336 (398)
T 3ele_A 278 GAGR---AL--G------------YVCAPSLFQKMIVKCQGAT---GDINAYKENRDLLYEGLTRI-GYHCFKPDGAFYM 336 (398)
T ss_dssp HHHH---HT--T------------CCCSCHHHHHHHTTCTTCC---CCHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEE
T ss_pred HHhh---hc--c------------ccCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHc-CCeecCCCeeEEE
Confidence 0000 00 0 0001112222222222111 12355566777888888776 7776654332223
Q ss_pred eeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHH
Q psy9807 422 CFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEK 501 (561)
Q Consensus 422 ~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~ 501 (561)
.+++ ...+ ..+
T Consensus 337 ~~~~-------------------------------------------------------------------~~~~--~~~ 347 (398)
T 3ele_A 337 FVKA-------------------------------------------------------------------LEDD--SNA 347 (398)
T ss_dssp EEEC-------------------------------------------------------------------SSSC--HHH
T ss_pred EEEc-------------------------------------------------------------------CCCC--HHH
Confidence 3322 1111 346
Q ss_pred HHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 502 LLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 502 l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+.+.|.+.|..+..+.......++|++++ +++++|+++++.|.++.+++
T Consensus 348 ~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 348 FCEKAKEEDVLIVAADGFGCPGWVRISYC---VDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp HHHHHHTTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEeCccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 77788887755544443333458999974 48899999999998887653
No 110
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.79 E-value=7.9e-18 Score=176.68 Aligned_cols=236 Identities=8% Similarity=-0.019 Sum_probs=149.8
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...+...++|+.+.+++++++|.++. -+++++||+||..++.+.... ++.+++
T Consensus 64 ~~~~~~~~~~~~~~~~la~~~g~~~~----------~i~~~sGt~a~~~~~~~~~~~-----------------gd~vl~ 116 (417)
T 3n0l_A 64 GGCEFVDEIETLAIERCKKLFNCKFA----------NVQPNSGSQANQGVYAALINP-----------------GDKILG 116 (417)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHSCT-----------------TCEEEE
T ss_pred ccchHHHHHHHHHHHHHHHHhCCCCc----------ceEeccHHHHHHHHHHHhcCC-----------------CCEEEe
Confidence 34466678999999999999998653 256667799998877664211 224444
Q ss_pred eccc-chHHH---HHHhccC--CeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH
Q psy9807 202 SPAC-TELEV---VMLDWLG--KMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 202 ~~s~-~s~~k---aa~~~g~--~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
.... .+... .....|. .++.++. +++.+|+++|+++|.+ . .+.+|+.+.++ +|.+.|+++|.++
T Consensus 117 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~--~-----~~~~v~~~~~~--~G~~~~l~~i~~l 187 (417)
T 3n0l_A 117 MDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKK--E-----KPKLIVCGASA--YARVIDFAKFREI 187 (417)
T ss_dssp ECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHH--H-----CCSEEEECCSS--CCSCCCHHHHHHH
T ss_pred cccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHh--c-----CCeEEEECCcc--cCccCCHHHHHHH
Confidence 4433 33222 2223333 3455556 6788999999999974 2 35566655544 4999999999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
|++||+++++|++|+.+..+.......+ ..+|+++.++||+|.+|.+ |+++.+++............+.
T Consensus 188 ~~~~~~~li~Dea~~~g~~~~~~~~~~~---~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~~~~~~~~------- 256 (417)
T 3n0l_A 188 ADEIGAYLFADIAHIAGLVVAGEHPSPF---PYAHVVSSTTHKTLRGPRG-GIIMTNDEELAKKINSAIFPGI------- 256 (417)
T ss_dssp HHHHTCEEEEECTTTHHHHHTTSSCCCT---TTCSEEEEESSTTTCSCSC-EEEEESCHHHHHHHHHHHTTTT-------
T ss_pred HHHcCCEEEEECccchhhhhcccCCCcc---ccceEEEeeCccccCCCCe-eEEEECCHHHHHHHhhhhCCcc-------
Confidence 9999999999999865544332222222 2459999999999988874 7777765544332211100100
Q ss_pred CCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 355 APDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 355 ~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
.++.. .....+..++......+++++.++..++++++.+.|++ +++++..
T Consensus 257 ---------~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~ 307 (417)
T 3n0l_A 257 ---------QGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFKLVS 307 (417)
T ss_dssp ---------CSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGG
T ss_pred ---------cCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCceecc
Confidence 00111 12233444555545567888999999999999999998 5888765
No 111
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.79 E-value=7e-18 Score=176.57 Aligned_cols=214 Identities=9% Similarity=0.013 Sum_probs=144.9
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE 209 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ 209 (561)
..++.+.+++++|.+ ..+++++||+||..++.+.... ++++++.... .+..
T Consensus 67 ~~~l~~~la~~~g~~-----------~~i~~~sG~~a~~~~l~~~~~~-----------------gd~vl~~~~~~~~~~ 118 (398)
T 1gc0_A 67 LNLLEARMASLEGGE-----------AGLALASGMGAITSTLWTLLRP-----------------GDEVLLGNTLYGCTF 118 (398)
T ss_dssp HHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHCCT-----------------TCEEEEESSCCSHHH
T ss_pred HHHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHHHHhcC-----------------CCEEEEeCCCchhHH
Confidence 344445667777775 3488888999998887764210 1244444444 4555
Q ss_pred HHH----HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEec
Q psy9807 210 VVM----LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 210 kaa----~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVD 285 (561)
..+ ...|.+++.++. .|+++|+++|++ .+.+|+++..++.+|.+.|+++|+++|++||+++|+|
T Consensus 119 ~~~~~~~~~~g~~~~~~~~----~d~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 186 (398)
T 1gc0_A 119 AFLHHGIGEFGVKLRHVDM----ADLQALEAAMTP--------ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVD 186 (398)
T ss_dssp HHHHHTGGGGTCEEEEECT----TCHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEE
T ss_pred HHHHHHHHHcCCEEEEECC----CCHHHHHHhcCC--------CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEE
Confidence 544 456778888873 489999998876 5788888999999999999999999999999999999
Q ss_pred hhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccc
Q psy9807 286 AAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQI 363 (561)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (561)
++|+.+....+. .. .+|+++.++||+++.|.+ .|+++.++. .+...+.....++.
T Consensus 187 ~~~~~~~~~~~~----~~---~~d~~~~S~sK~~~~~~~~~~G~l~~~~~-~~~~~~~~~~~~~~--------------- 243 (398)
T 1gc0_A 187 NTYCTPYLQRPL----EL---GADLVVHSATKYLSGHGDITAGIVVGSQA-LVDRIRLQGLKDMT--------------- 243 (398)
T ss_dssp CTTTHHHHCCGG----GG---TCSEEEEETTTTTTCSSSCCCEEEEECHH-HHHHHHHTHHHHHT---------------
T ss_pred CCCcccccCCch----hh---CceEEEECCccccCCCCCCeEEEEEEChH-HHHHHHHHHhhccC---------------
Confidence 999866543321 11 359999999999999886 677777543 23211211000000
Q ss_pred cCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 364 PLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 364 ~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
+-....+..|+.++.+ +.+..+.++..++++++.+.|++.|++.
T Consensus 244 --~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~v~ 287 (398)
T 1gc0_A 244 --GAVLSPHDAALLMRGI--KTLNLRMDRHCANAQVLAEFLARQPQVE 287 (398)
T ss_dssp --CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred --CCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence 0012334455554443 3456677888889999999999887654
No 112
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.79 E-value=2.5e-17 Score=175.15 Aligned_cols=331 Identities=10% Similarity=0.021 Sum_probs=204.6
Q ss_pred HHHHHHHHhhcccc---ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHH
Q psy9807 104 AIVADILSDSIACI---GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTM 180 (561)
Q Consensus 104 ~~~~~~l~~~~n~~---~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~ 180 (561)
..+.+.+...++.. ...|...+...++++.+.+++.+.+|.+ + ....++|+|||+++..++.+..+.
T Consensus 94 ~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~-------~~~v~~t~G~~~al~~~~~~l~~~-- 163 (448)
T 3aow_A 94 EIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-Q-------DNDIMITSGSQQALDLIGRVFLNP-- 163 (448)
T ss_dssp HHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-T-------TSEEEEESSHHHHHHHHHHHHCCT--
T ss_pred HHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-C-------hhhEEEeCcHHHHHHHHHHHHcCC--
Confidence 33444444444322 1234444556789999999998888984 2 025799999999987776654211
Q ss_pred HHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEE-EEec
Q psy9807 181 QRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQV-VATL 257 (561)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~v-v~t~ 257 (561)
++.+++.... .+...++...|.+++.+|. +++ +|+++|+++|+. +...+.++.+| +...
T Consensus 164 ---------------Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~--~~~~~~~~k~v~~~~~ 225 (448)
T 3aow_A 164 ---------------GDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEG-MKVEILEEKLKE--LKSQGKKVKVVYTVPT 225 (448)
T ss_dssp ---------------TCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHH--HHHTTCCEEEEEECCS
T ss_pred ---------------CCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHhh--hhccCCCCeEEEECCC
Confidence 2345554444 6677777788899999998 554 999999999973 32222256666 5667
Q ss_pred CCCCCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCc--cccceeeecCCccccccc-cceeEEec
Q psy9807 258 GTTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGV--ELADSFNFNPHKWMLVTF-DCSAMWLK 331 (561)
Q Consensus 258 gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi--~~aDsi~~~~HK~l~~P~-g~g~l~~r 331 (561)
..+.||.+-| +++|+++|++||+++++|++|+....-...... +..+ ...+.+..+++|+++ |. -+|+++.+
T Consensus 226 ~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~-~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~ 303 (448)
T 3aow_A 226 FQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKK-IKALDNEGRVIYLGTFSKILA-PGFRIGWMVGD 303 (448)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCC-TGGGCTTSCEEEEEESTTTTC-GGGCCEEEEEC
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcC-HHhcCCCCCEEEEccchhhcc-ccccEEEEEeC
Confidence 7888998866 579999999999999999999865331111111 1112 123678889999998 42 37888875
Q ss_pred ChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHhc-
Q psy9807 332 DPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG----VKYLQEYIRKQISLAKEFEQLVRS- 406 (561)
Q Consensus 332 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g----~~g~~~~~~~~~~la~~l~~~l~~- 406 (561)
+..+.........+. + + ...+..+++.+.+. .+.++++.++..+..+++.+.|++
T Consensus 304 -~~l~~~l~~~~~~~~-------------~---~---~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 363 (448)
T 3aow_A 304 -PGIIRKMEIAKQSTD-------------L---C---TNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEF 363 (448)
T ss_dssp -HHHHHHHHHHHHHHH-------------S---S---CCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHhc-------------C---C---CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333322111100000 0 0 11222222233331 344666677777888999999987
Q ss_pred CC-CeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhh
Q psy9807 407 DD-RFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLM 485 (561)
Q Consensus 407 ~~-g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~ 485 (561)
.| ++++..+.....+.+++.+
T Consensus 364 ~~~g~~~~~p~~g~~~~v~~~~---------------------------------------------------------- 385 (448)
T 3aow_A 364 MPEGVKWTKPEGGMFIWVTLPD---------------------------------------------------------- 385 (448)
T ss_dssp CCTTCEECCCSBSSEEEEECST----------------------------------------------------------
T ss_pred CCCCeEEeCCCccEEEEEEcCC----------------------------------------------------------
Confidence 57 6877654433333332211
Q ss_pred cceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 486 GLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI----RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 486 ~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
+.+ ..++.++|.++|..+..+... .+..++|+++.. . ++++|+++++.|.++.+++.
T Consensus 386 --------~~~--~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~-~-~~e~i~~~~~~L~~~l~~~~ 446 (448)
T 3aow_A 386 --------GID--SKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY-V-DEDKIMEGIKRLAETIKEEL 446 (448)
T ss_dssp --------TCC--HHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS-S-CTHHHHHHHHHHHHHHHHHH
T ss_pred --------CCC--HHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC-C-CHHHHHHHHHHHHHHHHHHH
Confidence 011 346788888887555443322 245689999765 3 67899999999988876543
No 113
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.79 E-value=1.1e-17 Score=174.17 Aligned_cols=239 Identities=14% Similarity=0.079 Sum_probs=148.2
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
.++...++++ .+++++|.+ ..++|+|||+|+..++.+.+ . .+ ++++++.
T Consensus 37 ~~~~~~~l~~----~la~~~~~~-----------~~~~~~~gt~al~~~~~~~~---~------~~-------gd~Vl~~ 85 (393)
T 1mdo_A 37 TGPKNQELEA----AFCRLTGNQ-----------YAVAVSSATAGMHIALMALG---I------GE-------GDEVITP 85 (393)
T ss_dssp SSHHHHHHHH----HHHHHHCCS-----------EEEEESCHHHHHHHHHHHTT---C------CT-------TCEEEEE
T ss_pred CChHHHHHHH----HHHHHhCCC-----------cEEEecChHHHHHHHHHHcC---C------CC-------CCEEEeC
Confidence 3455555555 446666654 36999999999988876641 0 00 2245554
Q ss_pred ccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC
Q psy9807 203 PAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD 279 (561)
Q Consensus 203 ~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~ 279 (561)
... .+...+++..|.+++.+|. . ++.+|+++|+++|++ .+.+|+++ +.+|.+.|+++|.++|++||
T Consensus 86 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~--------~~~~v~~~---~~~G~~~~~~~i~~l~~~~~ 154 (393)
T 1mdo_A 86 SMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP--------QTKAIIPV---HYAGAPADLDAIYALGERYG 154 (393)
T ss_dssp SSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT--------TEEEECCB---CGGGCCCCHHHHHHHHHHHT
T ss_pred CCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC--------CceEEEEe---CCCCCcCCHHHHHHHHHHcC
Confidence 444 6677777888999999998 4 478999999999866 45666654 46899999999999999999
Q ss_pred ceEEechhcccccccCccccccccCccccceeeecCC--ccccccccceeEEecChhhHHHhhccCC-CccccCCCCCCC
Q psy9807 280 VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPH--KWMLVTFDCSAMWLKDPSWVVNAFNVDP-LYLKHDQQGSAP 356 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~H--K~l~~P~g~g~l~~r~~~~l~~~~~~~~-~yl~~~~~~~~~ 356 (561)
+++++|++|+.+..+.. +.. +. .|+++.++| |+++++ ..|+++.+++........... .+. ........
T Consensus 155 ~~li~D~a~~~g~~~~~--~~~--~~--~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~ 226 (393)
T 1mdo_A 155 IPVIEDAAHATGTSYKG--RHI--GA--RGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGLG-VDAWDRQS 226 (393)
T ss_dssp CCBCEECTTCTTCEETT--EET--TS--SSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTEE-CC------
T ss_pred CeEEEECccccCCeECC--eec--CC--CCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCCc-ccchhhhc
Confidence 99999999985433321 111 11 599999999 999754 456666655544332211110 110 00000000
Q ss_pred CCCcccc-----cCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 357 DYRHWQI-----PLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 357 ~~~~~~~-----~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
....+.. ....+...+.....+ ...+++++..++..++++++.+.|++.+ +++..
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~a~~~--~~l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~ 286 (393)
T 1mdo_A 227 GGRAPQAEVLAPGYKYNLPDLNAAIAL--AQLQKLDALNARRAAIAAQYHQAMADLP-FQPLS 286 (393)
T ss_dssp -----CCEESSCCCBCCCCHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHHHHTSS-CEECC
T ss_pred ccccccccccccCccCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccccc
Confidence 0000111 010122333333222 2345577888888999999999999985 77753
No 114
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.79 E-value=1.5e-17 Score=172.10 Aligned_cols=237 Identities=9% Similarity=-0.047 Sum_probs=159.3
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
.++++.+.+++.+.+|.+-. ....++|+|||+|+..++.+.... ++++++.... .
T Consensus 61 ~~lr~~la~~~~~~~~~~~~-------~~~i~~t~g~~~a~~~~~~~~~~~-----------------gd~vl~~~~~~~ 116 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQAR-------PEWIFPIPDVVRGLYIAIDHFTPA-----------------QSKVIVPTPAYP 116 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCC-------GGGEEEESCHHHHHHHHHHHHSCT-----------------TCCEEEEESCCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-------HHHEEEeCChHHHHHHHHHHhcCC-----------------CCEEEEcCCCcH
Confidence 67899999999988886522 126799999999998777653211 2345555444 7
Q ss_pred hHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEE
Q psy9807 207 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLH 283 (561)
Q Consensus 207 s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lh 283 (561)
++..++...|.+++.+|.+.. +|+++|++++++ .+.+|+.+...+.+|.+-| +++|+++|++||++++
T Consensus 117 ~~~~~~~~~g~~~~~~~~~~~-~d~~~l~~~l~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li 187 (377)
T 3fdb_A 117 PFFHLLSATQREGIFIDATGG-INLHDVEKGFQA--------GARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVL 187 (377)
T ss_dssp HHHHHHHHHTCCEEEEECTTS-CCHHHHHHHHHT--------TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHcCCEEEEccCCCC-CCHHHHHHHhcc--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 777788888999999999333 999999999977 3557777788889999864 6777778999999999
Q ss_pred echhcccccccC-ccccccccCc--cccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCC
Q psy9807 284 VDAAYAGSAFIC-PENRYLMKGV--ELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYR 359 (561)
Q Consensus 284 VDaA~gg~~~~~-~~~~~~~~gi--~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (561)
+|++|+...... ..... +..+ ...+.+..++||+++.| ...|.+++.++..... +.....+..
T Consensus 188 ~De~~~~~~~~g~~~~~~-~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~-~~~~~~~~~----------- 254 (377)
T 3fdb_A 188 VDEIHAPLVFDGQHTVAA-GVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEH-WQQLSPVIK----------- 254 (377)
T ss_dssp EECTTGGGBSSSCCCCGG-GSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHH-HHHSCHHHH-----------
T ss_pred EEcccchhhcCCCCCccc-HHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHH-HHHHHHhhc-----------
Confidence 999998644322 11111 1122 12347788999999644 4567677756544332 221111100
Q ss_pred cccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecccc
Q psy9807 360 HWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRS-DDRFEVIYEVL 417 (561)
Q Consensus 360 ~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~g~~l~~~~~ 417 (561)
-....+..+++...+ +.+.++++.++..++.+++.+.|++ .|++++..+..
T Consensus 255 -------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 308 (377)
T 3fdb_A 255 -------DGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQA 308 (377)
T ss_dssp -------CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSB
T ss_pred -------CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCe
Confidence 011223333333333 3456788889999999999999998 88988875443
No 115
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.79 E-value=5.7e-17 Score=167.14 Aligned_cols=285 Identities=9% Similarity=0.050 Sum_probs=188.8
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka 211 (561)
++.+.+++++|.+++ ..++|+|||+++..++.+.... ++++++.... .++..+
T Consensus 69 ~lr~~la~~~~~~~~---------~v~~~~g~~~a~~~~~~~l~~~-----------------gd~vl~~~~~~~~~~~~ 122 (365)
T 3get_A 69 ELKSTLAQKYKVQNE---------NIIIGAGSDQVIEFAIHSKLNS-----------------KNAFLQAGVTFAMYEIY 122 (365)
T ss_dssp HHHHHHHHHHTCCGG---------GEEEESSHHHHHHHHHHHHCCT-----------------TCEEEECSSCCTHHHHH
T ss_pred HHHHHHHHHhCCCcc---------eEEECCCHHHHHHHHHHHHhCC-----------------CCEEEEeCCChHHHHHH
Confidence 445566777787654 6799999999987776653110 2345544444 677777
Q ss_pred HHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh--hcCceEEechh
Q psy9807 212 MLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR--QKDVWLHVDAA 287 (561)
Q Consensus 212 a~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~--~~~~~lhVDaA 287 (561)
+...|.+++.+|. +++ +|+++|++++.+ .+.+|+++..++.||.+-|++++.++++ ++|+++++|++
T Consensus 123 ~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~--------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~ 193 (365)
T 3get_A 123 AKQCGAKCYKTQSITHNL-DEFKKLYETHKD--------EIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAA 193 (365)
T ss_dssp HHHHTCEEEECSSSSCCH-HHHHHHHHHTTT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECT
T ss_pred HHHcCCEEEEEecCCCCC-CCHHHHHHHhCC--------CCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCc
Confidence 8888999999996 667 999999999976 5778888888999999999999999888 77999999999
Q ss_pred cccccc--cCcccccccc--CccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccc
Q psy9807 288 YAGSAF--ICPENRYLMK--GVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQ 362 (561)
Q Consensus 288 ~gg~~~--~~~~~~~~~~--gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (561)
|+.... .......... +....+.+..++||+++.| ...|+++. ++............|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~---------------- 256 (365)
T 3get_A 194 YNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIISAFYKLRAPF---------------- 256 (365)
T ss_dssp THHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHHHHHHHSCTT----------------
T ss_pred cHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEc-CHHHHHHHHHhcCCC----------------
Confidence 985442 1110000011 0112367888999999744 46788877 544433222111111
Q ss_pred ccCcCCcchHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhH
Q psy9807 363 IPLGRRFRSLKLWFVLRLL-GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKL 441 (561)
Q Consensus 363 ~~~sr~~~al~lw~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~ 441 (561)
+ ...+..+++...+ ..+.++++.++..++.+++.+.|++. ++++.. +..+.+.+++.
T Consensus 257 ---~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~~~~~~~~~~~--------------- 314 (365)
T 3get_A 257 ---N--VSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIKIID-SYTNFITYFFD--------------- 314 (365)
T ss_dssp ---C--SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEECC-CSSSEEEEECS---------------
T ss_pred ---C--cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEECC-CCCeEEEEECC---------------
Confidence 0 1222233333333 23678888899999999999999988 887653 33334333321
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECC
Q psy9807 442 WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRD 521 (561)
Q Consensus 442 w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g 521 (561)
+. ...++.+.|.+.|.....+....
T Consensus 315 ----------------------------------------------------~~--~~~~~~~~l~~~gi~v~~g~~~~- 339 (365)
T 3get_A 315 ----------------------------------------------------EK--NSTDLSEKLLKKGIIIRNLKSYG- 339 (365)
T ss_dssp ----------------------------------------------------SS--CHHHHHHHHHTTTEECEECGGGT-
T ss_pred ----------------------------------------------------CC--CHHHHHHHHHHCCEEEEECccCC-
Confidence 11 14577888888865443333222
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 522 VYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 522 ~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
..++|++++ +++|+++++++|+++.
T Consensus 340 ~~~iRis~~----~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 340 LNAIRITIG----TSYENEKFFTEFDKIL 364 (365)
T ss_dssp CSEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcC----CHHHHHHHHHHHHHHh
Confidence 568999965 6789999999998764
No 116
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.79 E-value=4.1e-17 Score=167.82 Aligned_cols=284 Identities=12% Similarity=0.023 Sum_probs=187.3
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++.+++++++|.+++ ..+||+|||+|+..++.++ +++++.... .++..
T Consensus 64 ~~l~~~la~~~~~~~~---------~i~~~~g~t~al~~~~~~~---------------------d~vi~~~~~~~~~~~ 113 (361)
T 3ftb_A 64 RRLNKSIENYLKLKDI---------GIVLGNGASEIIELSISLF---------------------EKILIIVPSYAEYEI 113 (361)
T ss_dssp HHHHHHHHHHHTCCSC---------EEEEESSHHHHHHHHHTTC---------------------SEEEEEESCCTHHHH
T ss_pred HHHHHHHHHHhCCCcc---------eEEEcCCHHHHHHHHHHHc---------------------CcEEEecCChHHHHH
Confidence 3445566777787553 5789999999987776553 145555555 77777
Q ss_pred HHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEech
Q psy9807 211 VMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVDa 286 (561)
++...|.+++.+|. .++.+++++|++++++ +.+|+.+...+.+|.+-| +++|+++|++||+++++|+
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~---------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 184 (361)
T 3ftb_A 114 NAKKHGVSVVFSYLDENMCIDYEDIISKIDD---------VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDE 184 (361)
T ss_dssp HHHHTTCEEEEEECCTTSCCCHHHHHHHTTT---------CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHcCCeEEEeecCcccCCCHHHHHHhccC---------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEEC
Confidence 88888999999999 7778999999888743 446777888888999875 6677788889999999999
Q ss_pred hcccccccCcccccccc--CccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccc
Q psy9807 287 AYAGSAFICPENRYLMK--GVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQI 363 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~~--gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (561)
+|+..... . ...... +....+.+..++||+++.| ...|.+++.++............|
T Consensus 185 ~~~~~~~~-~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~----------------- 245 (361)
T 3ftb_A 185 AFIEFTGD-P-SSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPW----------------- 245 (361)
T ss_dssp SSGGGTCC-T-TSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTT-----------------
T ss_pred cchhhcCC-c-ccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCC-----------------
Confidence 99865432 1 111111 1112246677999999744 456777756665443322111111
Q ss_pred cCcCCcchHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeccccccceeeecccCccccccccchhhH
Q psy9807 364 PLGRRFRSLKLWFVLRLL-GVKYLQEYIRKQISLAKEFEQLVRSDDRFE-VIYEVLMGLVCFRLKHWQIPLGRRFRSLKL 441 (561)
Q Consensus 364 ~~sr~~~al~lw~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~g~~-l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~ 441 (561)
....+..+++...+ ..+.++++.++..++.+++.+.|+++|+++ +.. +..+.+.+++.
T Consensus 246 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~--------------- 305 (361)
T 3ftb_A 246 ----NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFS-PHANFVLCRLE--------------- 305 (361)
T ss_dssp ----CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEC-CSSSEEEEEES---------------
T ss_pred ----CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecC-CCCeEEEEEcC---------------
Confidence 11223333333333 246778888999999999999999999988 553 34444444332
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeE--
Q psy9807 442 WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKI-- 519 (561)
Q Consensus 442 w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-- 519 (561)
+. ...++.+.|.++|.....+...
T Consensus 306 ----------------------------------------------------~~--~~~~l~~~l~~~gi~v~~g~~~~~ 331 (361)
T 3ftb_A 306 ----------------------------------------------------NI--SGEKLYDSLLKEDIVIRRCCNFIG 331 (361)
T ss_dssp ----------------------------------------------------SS--CHHHHHHHHHTTTEECEECTTSTT
T ss_pred ----------------------------------------------------CC--CHHHHHHHHHHCCeEEeeCccCCC
Confidence 11 1346788888886544333322
Q ss_pred CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 520 RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 520 ~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
.+..++|++++ +++++++++++|+++.+
T Consensus 332 ~~~~~iRis~~----~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 332 LDDSFVRFAIK----DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp CCTTEEEEECC----CHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcC----CHHHHHHHHHHHHHHHh
Confidence 23568999865 66789999999988764
No 117
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.79 E-value=1.7e-17 Score=175.23 Aligned_cols=271 Identities=9% Similarity=-0.001 Sum_probs=173.4
Q ss_pred HHHHHHhhccc---cccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCC-CeEEeCChhHHHHHHHHHHHHHHHH
Q psy9807 106 VADILSDSIAC---IGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQ 181 (561)
Q Consensus 106 ~~~~l~~~~n~---~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~-~g~~t~ggT~anl~al~~ar~~~~~ 181 (561)
+.+.+...++. ....|...+...++++.+.+|+.+.+|.+.+ .. ..+||+|||+|+..++.+....
T Consensus 55 v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~-------~~~~v~~~~g~~~a~~~~~~~~~~~--- 124 (429)
T 1yiz_A 55 ALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTIN-------PMTEVLVTVGAYEALYATIQGHVDE--- 124 (429)
T ss_dssp HHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCC-------TTTSEEEESHHHHHHHHHHHHHCCT---
T ss_pred HHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------CcCCEEEecChHHHHHHHHHHhcCC---
Confidence 34444554443 2233443344678999999999998886422 13 5799999999998877664210
Q ss_pred HHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C----------CCccChhhHHHHHhhhchhhcCCc
Q psy9807 182 RVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E----------FLACSGGKGGGVIQRKSDREMCSD 249 (561)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~----------~g~~d~~~Le~~i~~~~~~~~g~~ 249 (561)
++++++.... .+...++...|.+++.+|. . ++.+|+++|++++.+ .
T Consensus 125 --------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~ 182 (429)
T 1yiz_A 125 --------------GDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE--------K 182 (429)
T ss_dssp --------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCT--------T
T ss_pred --------------CCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhcc--------C
Confidence 1245555444 6677777888899999998 4 457999999999865 5
Q ss_pred eEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCcccccc-c
Q psy9807 250 LLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVT-F 323 (561)
Q Consensus 250 p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P-~ 323 (561)
+.+|+++..++.+|.+-| +++|+++|++||+++++|++|++........... +.+....|.+..++||+++.| .
T Consensus 183 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~ 262 (429)
T 1yiz_A 183 TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGW 262 (429)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGG
T ss_pred ceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCc
Confidence 677777888889999975 9999999999999999999998644322111111 111234689999999988733 2
Q ss_pred cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh----h--HHHHHHHHHHHHHHH
Q psy9807 324 DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL----G--VKYLQEYIRKQISLA 397 (561)
Q Consensus 324 g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~----g--~~g~~~~~~~~~~la 397 (561)
.+|++++++ ..+.. +.....+. .++ .+ ......+..+++.. + .+.++++.++..++.
T Consensus 263 r~G~~~~~~-~~~~~-l~~~~~~~------------~~~--~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (429)
T 1yiz_A 263 KIGWAYGPE-ALLKN-LQMVHQNC------------VYT--CA-TPIQEAIAVGFETELKRLKSPECYFNSISGELMAKR 325 (429)
T ss_dssp CCEEEESCH-HHHHH-HHHHHHTT------------TCC--CC-HHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred ceEEEEeCH-HHHHH-HHHHHhhc------------ccC--CC-hHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHH
Confidence 378888753 33322 21100000 000 00 01112223333331 3 445777888888899
Q ss_pred HHHHHHHhcCCCeEEeccccccceeeecc
Q psy9807 398 KEFEQLVRSDDRFEVIYEVLMGLVCFRLK 426 (561)
Q Consensus 398 ~~l~~~l~~~~g~~l~~~~~~~~v~f~~~ 426 (561)
+++.+.|++. ++++..+.....+.+++.
T Consensus 326 ~~l~~~L~~~-g~~~~~~~~g~~~~~~~~ 353 (429)
T 1yiz_A 326 DYMASFLAEV-GMNPTVPQGGYFMVADWS 353 (429)
T ss_dssp HHHHHHHHHH-TCEEEECSBSSEEEEECC
T ss_pred HHHHHHHHhC-CCcccCCCcceEEEEEcc
Confidence 9999999887 788765544445555543
No 118
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.79 E-value=8.3e-17 Score=166.40 Aligned_cols=291 Identities=10% Similarity=-0.003 Sum_probs=193.4
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
..++++.+.+|+.+.+|++-. ....++|+|||+++..++.+.... ++++++....
T Consensus 71 ~~~l~~~la~~l~~~~g~~~~-------~~~v~~~~G~~~al~~~~~~l~~~-----------------gd~Vl~~~~~y 126 (369)
T 3cq5_A 71 AVELRDELAAYITKQTGVAVT-------RDNLWAANGSNEILQQLLQAFGGP-----------------GRTALGFQPSY 126 (369)
T ss_dssp CHHHHHHHHHHHHHHHCCCCC-------GGGEEEESHHHHHHHHHHHHHCST-----------------TCEEEEEESSC
T ss_pred HHHHHHHHHHhhhhcccCCCC-------hHhEEECCChHHHHHHHHHHhcCC-----------------CCEEEEcCCCh
Confidence 368999999999998776421 025788999888886666553210 1245555444
Q ss_pred chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEe
Q psy9807 206 TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHV 284 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhV 284 (561)
.++..++...|.+++.+|. +++.+|+++|++++.+ . .+.+|+++..++.+|.+.|++++.++|+.+++++++
T Consensus 127 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~ 199 (369)
T 3cq5_A 127 SMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRA--K-----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIV 199 (369)
T ss_dssp THHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHH--H-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEE
T ss_pred HHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhc--c-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEE
Confidence 6777778888999999998 6678999999999865 2 355677788889999999999999999999999999
Q ss_pred chhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccc
Q psy9807 285 DAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQI 363 (561)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (561)
|++|+.+... +.........+..+.+..++||+++.| ..+|++++++. ... .+...... +
T Consensus 200 De~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~-~l~~~~~~--------------~-- 260 (369)
T 3cq5_A 200 DEAYAEFSPS-PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPA-FID-AVMLVRLP--------------Y-- 260 (369)
T ss_dssp ECTTGGGCCS-CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTH-HHH-HHHTTSCT--------------T--
T ss_pred ECCchhhcCC-cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHH-HHH-HHHHcCCC--------------C--
Confidence 9999865421 111111121211358899999999755 34788888643 332 22211100 0
Q ss_pred cCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHH
Q psy9807 364 PLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLW 442 (561)
Q Consensus 364 ~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w 442 (561)
+ ...+..+++...+. .+.++++.++..++.+++.+.|++. ++++. ++..+.+.|++
T Consensus 261 --~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~----------------- 317 (369)
T 3cq5_A 261 --H--LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYAVV-PSESNFVFFGD----------------- 317 (369)
T ss_dssp --C--SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCEEE-CCSSSEEEEEC-----------------
T ss_pred --C--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEEC-----------------
Confidence 0 12333344444442 3457778888889999999999884 78776 33444433322
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCE
Q psy9807 443 FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDV 522 (561)
Q Consensus 443 ~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~ 522 (561)
. .+ ..++.+.|.+.|.. +.+. ...
T Consensus 318 --------------------------------------------------~-~~--~~~l~~~l~~~gi~-v~~~--~~~ 341 (369)
T 3cq5_A 318 --------------------------------------------------F-SD--QHAAWQAFLDRGVL-IRDV--GIA 341 (369)
T ss_dssp --------------------------------------------------C-SS--HHHHHHHHHHTTEE-CBCC--SCT
T ss_pred --------------------------------------------------C-CC--HHHHHHHHHHCCEE-EEEC--CCC
Confidence 1 11 34677788777744 3332 224
Q ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 523 YFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 523 ~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
.++|+++. +++|+++++++|.++.
T Consensus 342 ~~iRis~~----~~~~i~~~~~~l~~~~ 365 (369)
T 3cq5_A 342 GHLRTTIG----VPEENDAFLDAAAEII 365 (369)
T ss_dssp TEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred CeEEEEeC----CHHHHHHHHHHHHHHH
Confidence 58999865 6789999999998764
No 119
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.79 E-value=2.9e-18 Score=180.07 Aligned_cols=303 Identities=9% Similarity=-0.047 Sum_probs=182.5
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
...+|+.+.+++++++|.++. -+++++||+||..++.+.... ++.+++....
T Consensus 74 ~~~~~~~~~~~la~~~~~~~~----------~v~~~sGs~a~~~a~~~~~~~-----------------gd~v~~~~~~~ 126 (420)
T 3gbx_A 74 VDVVEQLAIDRAKELFGADYA----------NVQPHSGSQANFAVYTALLQP-----------------GDTVLGMNLAQ 126 (420)
T ss_dssp CHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCCT-----------------TCEEEEEEEC-
T ss_pred HHHHHHHHHHHHHHHhCCCCc----------eeEecCcHHHHHHHHHHhcCC-----------------CCEEEecchhh
Confidence 356788888999999999753 255677799998877654211 1234443333
Q ss_pred chHH-HHH--HhccC--CeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC
Q psy9807 206 TELE-VVM--LDWLG--KMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD 279 (561)
Q Consensus 206 ~s~~-kaa--~~~g~--~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~ 279 (561)
.+.. .+. ...+. ..+.++. .++.+|+++|+++|++ . .+.+|+++.. +.|...|+++|+++|++||
T Consensus 127 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~--~-----~~~~v~~~~~--~~~~~~~l~~l~~l~~~~~ 197 (420)
T 3gbx_A 127 GGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKE--H-----KPKMIIGGFS--AYSGVVDWAKMREIADSIG 197 (420)
T ss_dssp -----------CHHHHSEEEEEEECTTCSCCHHHHHHHHHH--H-----CCSEEEECCT--TCCSCCCHHHHHHHHHHTT
T ss_pred cceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHh--c-----CCeEEEEecC--ccCCccCHHHHHHHHHHcC
Confidence 3312 111 22333 3444555 6788999999999976 3 3556666543 3467889999999999999
Q ss_pred ceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC--hhhHHHhhccCCCccccCCCCCCCC
Q psy9807 280 VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD--PSWVVNAFNVDPLYLKHDQQGSAPD 357 (561)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~--~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (561)
+++++|++|+.+.......... +..+|+++.++||++++|.| |+++.++ ..... .+.. +......+
T Consensus 198 ~~li~De~~~~~~~~~~~~~~~---~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~-~~~~---~~~~~~~~---- 265 (420)
T 3gbx_A 198 AYLFVDMAHVAGLIAAGVYPNP---VPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELYK-KLNS---AVFPSAQG---- 265 (420)
T ss_dssp CEEEEECTTTHHHHHTTSSCCS---TTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHHH-HHHH---HHC----C----
T ss_pred CEEEEECCcchhceecccCCcc---cccCCEEEeecccCCCCCCc-eEEEEcCCcHHHHH-Hhhh---hcCCCCCC----
Confidence 9999999987554433222222 22369999999999987875 7776655 12222 2210 00000000
Q ss_pred CCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc-ccccceeeecccCcccccccc
Q psy9807 358 YRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCFRLKHWQIPLGRRF 436 (561)
Q Consensus 358 ~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~-~~~~~v~f~~~~~~~~~~~~~ 436 (561)
..-......+..++.....++++++.++..++++++.+.|++. +++++.+ ...+.+.+.+.+.
T Consensus 266 -------~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-------- 329 (420)
T 3gbx_A 266 -------GPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDK-------- 329 (420)
T ss_dssp -------CCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGG--------
T ss_pred -------CcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCC--------
Confidence 0001122334445555555678889999999999999999984 8888654 2344433322110
Q ss_pred chhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEe
Q psy9807 437 RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVP 516 (561)
Q Consensus 437 ~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~ 516 (561)
+. ....+.+.|.+.|......
T Consensus 330 ---------------------------------------------------------~~--~~~~~~~~l~~~gi~v~~~ 350 (420)
T 3gbx_A 330 ---------------------------------------------------------NL--TGKEADAALGRANITVNKN 350 (420)
T ss_dssp ---------------------------------------------------------TC--CHHHHHHHHHHTTEECEEE
T ss_pred ---------------------------------------------------------CC--CHHHHHHHHHHCCcEeccc
Confidence 00 1235667777777544331
Q ss_pred ------eeECCEEEEEEEecCCC---CCHHHHHHHHHHHHHHHHH
Q psy9807 517 ------SKIRDVYFLRMAVCSRY---SESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 517 ------~~~~g~~~lR~~~~~~~---t~~~di~~l~~~l~~~~~~ 552 (561)
....+...+|+++.... .+++++++++++|+++.++
T Consensus 351 ~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 351 SVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp CCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 11123345999876433 3578999999999887654
No 120
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.79 E-value=2.2e-17 Score=172.47 Aligned_cols=238 Identities=14% Similarity=0.088 Sum_probs=151.7
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
+|...++++.+ ++++|.+ ..++|+|||+|+..++.+.+ . .+ ++++++..
T Consensus 31 g~~~~~l~~~l----a~~~~~~-----------~v~~~~ggt~al~~~~~~l~---~------~~-------gd~Vl~~~ 79 (394)
T 1o69_A 31 GEFVNRFEQSV----KDYSKSE-----------NALALNSATAALHLALRVAG---V------KQ-------DDIVLASS 79 (394)
T ss_dssp THHHHHHHHHH----HHHHCCS-----------EEEEESCHHHHHHHHHHHTT---C------CT-------TCEEEEES
T ss_pred ChHHHHHHHHH----HHHhCCC-----------cEEEeCCHHHHHHHHHHHcC---C------CC-------CCEEEECC
Confidence 45555666655 5555653 47999999999988877641 0 00 22455544
Q ss_pred cc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCce
Q psy9807 204 AC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVW 281 (561)
Q Consensus 204 s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~ 281 (561)
.. .+...++...|.+++.+|. +++.+|+++|+++|.+ .. ..+.+|+++. .+|...|+++|.++|++||++
T Consensus 80 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~ 151 (394)
T 1o69_A 80 FTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKE--CE---KKPKALILTH---LYGNAAKMDEIVEICKENDIV 151 (394)
T ss_dssp SSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHH--CS---SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCE
T ss_pred CccHHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhc--cc---CCceEEEEEC---CCCChhhHHHHHHHHHHcCCE
Confidence 44 6677777788999999999 7889999999999975 21 1345566553 689999999999999999999
Q ss_pred EEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcc
Q psy9807 282 LHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHW 361 (561)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (561)
+++|+||+.+..+... . ...+..+|+++++.||+++ |.++|+++++++..+.........+... .+.+.
T Consensus 152 li~Dea~~~g~~~~~~--~-~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~-----~~~~~-- 220 (394)
T 1o69_A 152 LIEDAAEALGSFYKNK--A-LGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQAREN-----CLHYE-- 220 (394)
T ss_dssp EEEECTTCTTCEETTE--E-TTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCS-----SSSCC--
T ss_pred EEEECcCcccceeCCc--c-cccccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhcccc-----Ccccc--
Confidence 9999999833333221 1 1112246999999999776 6789999987655443322211111100 00010
Q ss_pred cccCcCCcc--hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 362 QIPLGRRFR--SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 362 ~~~~sr~~~--al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
..+.+.+++ .+...+++.. .+.+++++++..++++++.+.|++. ++++.+
T Consensus 221 ~~~~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~ 272 (394)
T 1o69_A 221 HLDYGYNYRLSNVLGAIGVAQ--MEVLEQRVLKKREIYEWYKEFLGEY--FSFLDE 272 (394)
T ss_dssp CSSCCCBCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTT--EECCCC
T ss_pred ccccCcccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccc--ccccCC
Confidence 001111222 2222222222 3346778899999999999999886 666543
No 121
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.78 E-value=2.6e-18 Score=177.68 Aligned_cols=236 Identities=14% Similarity=0.094 Sum_probs=151.9
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
+..+|...++|+.+ ++++|.+ .+++++|||+|+..++.+++- .+ +++++
T Consensus 31 ~~~~~~~~~l~~~l----a~~~~~~-----------~~~~~~sGt~al~~al~~~~~---------~~-------gd~Vi 79 (367)
T 3nyt_A 31 YILGPEVTELEDRL----ADFVGAK-----------YCISCANGTDALQIVQMALGV---------GP-------GDEVI 79 (367)
T ss_dssp CSSCHHHHHHHHHH----HHHHTCS-----------EEEEESCHHHHHHHHHHHTTC---------CT-------TCEEE
T ss_pred ccCChHHHHHHHHH----HHHhCCC-----------cEEEeCCHHHHHHHHHHHhCC---------CC-------cCEEE
Confidence 34566666666655 6666664 369999999999888876520 00 22444
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
+.... .+...++...|.+++.++. +++.+|+++|+++|.+ .+.+|+ .++.+|...|+++|.++|++
T Consensus 80 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~--------~~~~v~---~~~~~G~~~~~~~i~~la~~ 148 (367)
T 3nyt_A 80 TPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITP--------RTKAII---PVSLYGQCADFDAINAIASK 148 (367)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCT--------TEEEEC---CBCGGGCCCCHHHHHHHHHH
T ss_pred ECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCc--------CCcEEE---eeCCccChhhHHHHHHHHHH
Confidence 44444 7777788888999999998 3489999999999966 455555 45678999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeec--CCccccccccceeEEecChhhHHHhhccCCCccccCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFN--PHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~--~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
||+++|+|++|+.+..+..... +. ..|.++++ +||+++.+...|+++.++........... .+ +..
T Consensus 149 ~~~~li~D~a~~~g~~~~~~~~----~~-~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~-~~------g~~ 216 (367)
T 3nyt_A 149 YGIPVIEDAAQSFGASYKGKRS----CN-LSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIA-RH------GQD 216 (367)
T ss_dssp TTCCBEEECTTTTTCEETTEET----TS-SSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHT-BT------TEE
T ss_pred cCCEEEEECccccCCeECCeec----cC-CCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHH-hc------CCC
Confidence 9999999999885443322111 11 12777777 59999874556777666654433221110 00 000
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
..+.......+.+...+..++.+..+ +.++++.++..++++++.+.|++. ++.+.
T Consensus 217 ~~~~~~~~g~~~~~~~~~aa~~~~~l--~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~ 271 (367)
T 3nyt_A 217 RRYHHIRVGVNSRLDTLQAAILLPKL--EIFEEEIALRQKVAAEYDLSLKQV-GIGTP 271 (367)
T ss_dssp ETTEECSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHHT-TCCCC
T ss_pred cCceeeccCcCCCccHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccC-Ceecc
Confidence 00111111122234444444444433 446778888899999999999987 45543
No 122
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.78 E-value=2.1e-17 Score=172.16 Aligned_cols=322 Identities=11% Similarity=0.034 Sum_probs=196.3
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+...+......|.......++.+.+.+++.+.+|.+-. ....+||+|||+|+..++.+....
T Consensus 49 v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~v~~t~g~~~al~~~~~~l~~~------- 114 (391)
T 3h14_A 49 AVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLD-------PGRVVITPGSSGGFLLAFTALFDS------- 114 (391)
T ss_dssp HHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESSHHHHHHHHHHHHCCT-------
T ss_pred HHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCC-------HHHEEEecChHHHHHHHHHHhcCC-------
Confidence 344455555443344544444678999999999999886422 126799999999998776653211
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
++.+++.... .+...++...|.+++.+|. . ++.+|+++|+++ + +.+|+++...+.
T Consensus 115 ----------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~--~---------~~~v~i~~p~np 173 (391)
T 3h14_A 115 ----------GDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL--D---------LAGLMVASPANP 173 (391)
T ss_dssp ----------TCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS--C---------CSEEEEESSCTT
T ss_pred ----------CCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc--C---------CeEEEECCCCCC
Confidence 2345544444 6677777888999999998 3 347799888765 2 446777788889
Q ss_pred CccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccc-ccccceeEEecChhhHH
Q psy9807 262 CCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWML-VTFDCSAMWLKDPSWVV 337 (561)
Q Consensus 262 tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~-~P~g~g~l~~r~~~~l~ 337 (561)
||.+-| +++|+++|++||+++++|++|+....... .... ......+.+..+++|+++ ....+|.++.++. ...
T Consensus 174 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~ 250 (391)
T 3h14_A 174 TGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVTA-LELTDECYVINSFSKYFSMTGWRVGWMVVPED-QVR 250 (391)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCG-GGTCSSSEEEEESSSTTCCTTSCCEEEECCGG-GHH
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcCh-hhcCCCEEEEEechhccCCccceeEEEEeCHH-HHH
Confidence 999987 89999999999999999999986443211 1111 112233577789999997 4455777776443 222
Q ss_pred HhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecccc
Q psy9807 338 NAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL 417 (561)
Q Consensus 338 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~ 417 (561)
........+. + ..-.+....+..++. +.+.++++.++..++.+++.+.|++. ++....++.
T Consensus 251 ~~~~~~~~~~----------~------~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~ 311 (391)
T 3h14_A 251 VVERIAQNMF----------I------CAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKA-GFTRIAPPD 311 (391)
T ss_dssp HHHHHHHHTT----------C------CCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCBCCCC
T ss_pred HHHHHHhhhc----------c------CCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHc-CCCcccCCC
Confidence 1111000000 0 000111122223333 56778888899999999999999887 444433333
Q ss_pred ccceee-ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCc
Q psy9807 418 MGLVCF-RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPN 496 (561)
Q Consensus 418 ~~~v~f-~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~ 496 (561)
.+...+ ++. ...
T Consensus 312 ~~~~~~~~~~-------------------------------------------------------------------~~~ 324 (391)
T 3h14_A 312 GAFYVYADVS-------------------------------------------------------------------DLT 324 (391)
T ss_dssp BTTEEEEECT-------------------------------------------------------------------TTC
T ss_pred eeEEEEEecC-------------------------------------------------------------------ccC
Confidence 333222 111 101
Q ss_pred HHHHHHHHHHHhC-CcEEEEeeeE---CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 497 EINEKLLKRINGN-GKIHLVPSKI---RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 497 ~~~~~l~~~L~~~-g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
....++.+.|.++ |.....+... .+..++|++++. ++++++++++.|.++.++..
T Consensus 325 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~---~~~~i~~~l~~l~~~~~~~~ 383 (391)
T 3h14_A 325 DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR---ATADIEEGLDRLEAFMQARG 383 (391)
T ss_dssp SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS---CHHHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHhc
Confidence 1134677787775 6544433222 235699999765 67899999999998876543
No 123
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.78 E-value=8.7e-18 Score=171.95 Aligned_cols=301 Identities=12% Similarity=0.072 Sum_probs=175.1
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|...|...+++ +++++++|.+ ..++++|||+||..++.+..+ + ++++
T Consensus 33 ~y~~~~~~~~l~----~~la~~~g~~-----------~~~~~~~gt~a~~~~~~~~~~----------~-------gd~V 80 (347)
T 1jg8_A 33 VYGEDPTINELE----RLAAETFGKE-----------AALFVPSGTMGNQVSIMAHTQ----------R-------GDEV 80 (347)
T ss_dssp GGTCCHHHHHHH----HHHHHHHTCS-----------EEEEESCHHHHHHHHHHHHCC----------T-------TCEE
T ss_pred ccCCChHHHHHH----HHHHHHhCCc-----------eEEEecCcHHHHHHHHHHhcC----------C-------CCEE
Confidence 344556555555 4667777775 358999999999877654311 1 2244
Q ss_pred EEeccc-chHH---HHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC-ccccC---HHH
Q psy9807 200 IASPAC-TELE---VVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC-CAFDC---LEE 270 (561)
Q Consensus 200 vv~~s~-~s~~---kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t-G~idp---l~e 270 (561)
++.... .+.. ..+...|.+++.+ . +++.+|+++|+++|.+ ....+.++.+|+.+..++.+ |.+-| +++
T Consensus 81 l~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~--~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~ 157 (347)
T 1jg8_A 81 ILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRP--RNIHFPRTSLIAIENTHNRSGGRVVPLENIKE 157 (347)
T ss_dssp EEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCC--SCTTSCCEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred EEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhcc--ccccccCceEEEEeccccccCCccCcHHHHHH
Confidence 443333 2332 2456678888888 6 6778999999999864 21111246778888888888 98865 578
Q ss_pred HHHHHhhcCceEEechhcccccc--cCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccc
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAF--ICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLK 348 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~--~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~ 348 (561)
|+++|++||+++++|+||.-+.. .......+. ..+|++++++||+++.|. |.+++.++..+.........+
T Consensus 158 i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~~~~~~~~~~-- 230 (347)
T 1jg8_A 158 ICTIAKEHGINVHIDGARIFNASIASGVPVKEYA---GYADSVMFCLSKGLCAPV--GSVVVGDRDFIERARKARKML-- 230 (347)
T ss_dssp HHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH---HTCSEEEEESSSTTCCSS--CEEEEECHHHHHHHHHHHHHH--
T ss_pred HHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc---ccccEEEEecccccCCCc--eEEEEcCHHHHHHHHHHHHHc--
Confidence 89999999999999998642111 111111111 245889999999999874 444444554433221110001
Q ss_pred cCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-ccccccceeeeccc
Q psy9807 349 HDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI-YEVLMGLVCFRLKH 427 (561)
Q Consensus 349 ~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~-~~~~~~~v~f~~~~ 427 (561)
+. +-+..++..+.+...+ +...+.+++..+.++++.+.|++. ++++. .++..+.+.+++.
T Consensus 231 ----~~-----------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~- 291 (347)
T 1jg8_A 231 ----GG-----------GMRQAGVLAAAGIIAL--TKMVDRLKEDHENARFLALKLKEI-GYSVNPEDVKTNMVILRTD- 291 (347)
T ss_dssp ----TC-----------CCSSTHHHHHHHHHHH--HHSSTTHHHHHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECT-
T ss_pred ----CC-----------chhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-CceeccCCCcceEEEEEcc-
Confidence 00 0001111111111111 111122344456778888888877 66653 2334444444331
Q ss_pred CccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHH
Q psy9807 428 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRIN 507 (561)
Q Consensus 428 ~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~ 507 (561)
..+....++.++|.
T Consensus 292 ------------------------------------------------------------------~~~~~~~~~~~~l~ 305 (347)
T 1jg8_A 292 ------------------------------------------------------------------NLKVNAHGFIEALR 305 (347)
T ss_dssp ------------------------------------------------------------------TSSSCHHHHHHHHH
T ss_pred ------------------------------------------------------------------cccCCHHHHHHHHH
Confidence 10111346788887
Q ss_pred hCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 508 GNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 508 ~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+.|.... +.. ..++|+++. ..++++|++++++.|+++.++
T Consensus 306 ~~gi~v~-~~~---~~~iRl~~~-~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 306 NSGVLAN-AVS---DTEIRLVTH-KDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp HHTEECE-EEE---TTEEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEe-cCC---CCeEEEEeC-CCCCHHHHHHHHHHHHHHHHh
Confidence 7775443 221 347999854 466889999999999887654
No 124
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.78 E-value=8.3e-17 Score=168.77 Aligned_cols=212 Identities=11% Similarity=0.068 Sum_probs=144.8
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH-
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV- 210 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k- 210 (561)
++.+.+++++|.+ ..++++||++|+..++.+... + ++.+++.... .+...
T Consensus 66 ~l~~~ia~~~g~~-----------~~i~~~~g~~ai~~~~~~l~~----------~-------gd~Vl~~~~~y~~~~~~ 117 (404)
T 1e5e_A 66 NLEGKIAFLEKTE-----------ACVATSSGMGAIAATVLTILK----------A-------GDHLISDECLYGCTHAL 117 (404)
T ss_dssp HHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHCC----------T-------TCEEEEESCCCHHHHHH
T ss_pred HHHHHHHHHhCCC-----------cEEEeCChHHHHHHHHHHHhC----------C-------CCEEEEeCCCchhHHHH
Confidence 3444556666775 358889999998777665311 0 2345554444 44455
Q ss_pred ---HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh-cCceEEech
Q psy9807 211 ---VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ-KDVWLHVDA 286 (561)
Q Consensus 211 ---aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~-~~~~lhVDa 286 (561)
.+...|.+++.+|.. |+++|+++|.+ .+.+|+++..++.+|.+.|+++|+++|++ ||+++++|+
T Consensus 118 ~~~~~~~~g~~~~~v~~~----d~~~l~~~i~~--------~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De 185 (404)
T 1e5e_A 118 FEHALTKFGIQVDFINTA----IPGEVKKHMKP--------NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADN 185 (404)
T ss_dssp HHTHHHHTTCEEEEECTT----STTHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEEC
T ss_pred HHHHHHHcCCEEEEECCC----CHHHHHHhcCC--------CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEEC
Confidence 566778888888854 88999999876 57788899999999999999999999999 999999999
Q ss_pred hcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccccc
Q psy9807 287 AYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIP 364 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (561)
+|+.+....|- . . .+|+++.++||+++.|.+ +|+++.++ ..+...+.....+..
T Consensus 186 ~~~~~~~~~~~-----~-~-~~di~~~S~sK~~~~~g~ri~G~~~~~~-~~~~~~l~~~~~~~~---------------- 241 (404)
T 1e5e_A 186 TFCSPMITNPV-----D-F-GVDVVVHSATKYINGHTDVVAGLICGKA-DLLQQIRMVGIKDIT---------------- 241 (404)
T ss_dssp TTTCTTTCCGG-----G-G-TCSEEEEETTTTTTCSSCCCCEEEEECH-HHHHHHHHTCCCCCC----------------
T ss_pred CCchhhhCCcc-----c-c-CCEEEEEcCccccCCCCCCeEEEEEECH-HHHHHHHHHHHHhCC----------------
Confidence 99865432221 1 1 359999999999999987 68887754 333312221111100
Q ss_pred CcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 365 LGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 365 ~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
+-....+..|++++.+.. +..++++..++++++.+.+++.+.+.
T Consensus 242 -g~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~l~~~l~~~~~v~ 285 (404)
T 1e5e_A 242 -GSVISPHDAWLITRGLST--LNIRMKAESENAMKVAEYLKSHPAVE 285 (404)
T ss_dssp -CCCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred -CCCCCHHHHHHHHHhHhH--HHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 001233455665555532 45667777888999999998876553
No 125
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.78 E-value=5.5e-17 Score=168.03 Aligned_cols=319 Identities=12% Similarity=0.055 Sum_probs=198.7
Q ss_pred HHHHHHhhcccc-ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 106 VADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 106 ~~~~l~~~~n~~-~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
+.+.+...+... ...|...+...++++.+.+|+.+.+|.+.+. ....+||+|||+++..++.+...
T Consensus 43 v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~------~~~v~~~~g~~~a~~~~~~~l~~------- 109 (376)
T 2dou_A 43 PLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDP------RREALALIGSQEGLAHLLLALTE------- 109 (376)
T ss_dssp HHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCT------TTSEEEESSHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC------CccEEEcCCcHHHHHHHHHHhcC-------
Confidence 344444544322 2234333466789999999998888986210 01579999999998777765321
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC 262 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t 262 (561)
+ ++++++.... .+...+++..|.+++.+|. ++..+|+++|++++.+ .+.+|+++...+.|
T Consensus 110 ---~-------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~v~l~~p~npt 171 (376)
T 2dou_A 110 ---P-------EDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWR--------EAKVLLLNYPNNPT 171 (376)
T ss_dssp ---T-------TCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHH--------HEEEEEECSSCTTT
T ss_pred ---C-------CCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhcc--------CceEEEECCCCCCc
Confidence 0 1245554444 6667777788999999998 5567999999999865 56777777778889
Q ss_pred ccccC---HHHHHHHHhhcCceEEechhcccccccCcccccccc--CccccceeeecCCcccccc-ccceeEEecChhhH
Q psy9807 263 CAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMK--GVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWV 336 (561)
Q Consensus 263 G~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~--gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l 336 (561)
|.+-| +++|+++|++||+++++|++|+...... .....+. +....+.+..++||+++.| ..+|+++. ++...
T Consensus 172 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~ 249 (376)
T 2dou_A 172 GAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALG-SEEAL 249 (376)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEE-CHHHH
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhheeEEEec-CHHHH
Confidence 99876 7889999999999999999998654321 1111111 1123467888999999754 34687766 44333
Q ss_pred HHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 337 VNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
.........+ + . ....+...++...+ +.+.++++.++..++.+++.+.|++. +++..
T Consensus 250 ~~l~~~~~~~---------------~--~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~ 308 (376)
T 2dou_A 250 ARLERVKGVI---------------D--F--NQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLP 308 (376)
T ss_dssp HHHHHHHHHH---------------C--C--CSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECC
T ss_pred HHHHHHHHhc---------------c--c--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccC
Confidence 2211110000 0 0 01112222233333 35667888888899999999999886 66543
Q ss_pred cccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC
Q psy9807 415 EVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG 494 (561)
Q Consensus 415 ~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~ 494 (561)
+.....+.+++.+ +
T Consensus 309 ~~~~~~~~~~~~~------------------------------------------------------------------~ 322 (376)
T 2dou_A 309 PRATMYLWGRLPE------------------------------------------------------------------G 322 (376)
T ss_dssp CCBSSEEEEECCT------------------------------------------------------------------T
T ss_pred CCeeEEEEEECCC------------------------------------------------------------------C
Confidence 3222223332211 1
Q ss_pred CcHHHHHHHHHHHhCCcEEEEeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 495 PNEINEKLLKRINGNGKIHLVPSKIR--DVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 495 ~~~~~~~l~~~L~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
.+ ..++.+.|.++|.....+.... +..++|++++. ++++++++++.|.++
T Consensus 323 ~~--~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 323 VD--DLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR---PLEELLEAAKRIREA 374 (376)
T ss_dssp CC--HHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHT
T ss_pred CC--HHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC---CHHHHHHHHHHHHHH
Confidence 11 2467888888865443322221 34689999763 678999999888764
No 126
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.78 E-value=1.1e-16 Score=172.58 Aligned_cols=339 Identities=9% Similarity=0.040 Sum_probs=204.5
Q ss_pred cccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc
Q psy9807 117 IGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII 196 (561)
Q Consensus 117 ~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~ 196 (561)
....|..++...++.+.+.+|+.+..|.+-. ....++|+|||+++..++.+... .+ +
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~~---------~~-------g 182 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDGFPAN-------ADDIFLTDGASPGVHLMMQLLIR---------NE-------K 182 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCC-------GGGEEEESSSHHHHHHHHHHHCC---------ST-------T
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcCCCCC-------cccEEEcCCHHHHHHHHHHHHcC---------CC-------C
Confidence 3456767777789999999999998886532 12679999999998777665320 00 2
Q ss_pred cceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHH
Q psy9807 197 ANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLE 269 (561)
Q Consensus 197 ~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~ 269 (561)
+.+++.... .++..++...|.+++.+|. + ++.+|+++|+++|++ ....|..+.+|+++...+.||.+- .++
T Consensus 183 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~ 260 (500)
T 3tcm_A 183 DGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLED--ARSRGINVRALVVINPGNPTGQVLAEENQY 260 (500)
T ss_dssp EEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHH--HHHTTCEEEEEEEESSCTTTCCCCCHHHHH
T ss_pred CEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHH--HHhcCCCceEEEEECCCCCCcccCCHHHHH
Confidence 244444444 6677778888999999998 3 459999999999988 666666788888888888999984 577
Q ss_pred HHHHHHhhcCceEEechhcccccccCc----cccccccCc----cccc-eeeecCCcccc-cc-ccceeEEec--ChhhH
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICP----ENRYLMKGV----ELAD-SFNFNPHKWML-VT-FDCSAMWLK--DPSWV 336 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~----~~~~~~~gi----~~aD-si~~~~HK~l~-~P-~g~g~l~~r--~~~~l 336 (561)
+|+++|++||+++++|.+|+....-.. ........+ +..+ .+..+++|.++ .| .-+|.+.+. ++..+
T Consensus 261 ~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 340 (500)
T 3tcm_A 261 DIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVR 340 (500)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHH
T ss_pred HHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHH
Confidence 777789999999999999986433111 111111111 1112 34559999983 33 235666652 43333
Q ss_pred HHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHH---------hhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 337 VNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRL---------LGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~---------~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
.........+. ++-......+...+.. .-.....++.++..++++++.+.|+++
T Consensus 341 ~~l~~~~~~~~-----------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 403 (500)
T 3tcm_A 341 EQIYKIASVNL-----------------CSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKL 403 (500)
T ss_dssp HHHHHHHHTTC-----------------CCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHhccc-----------------CCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 22211100010 0000111111111210 012345667778888999999999999
Q ss_pred CCeEEeccccccceee-ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhc
Q psy9807 408 DRFEVIYEVLMGLVCF-RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 486 (561)
Q Consensus 408 ~g~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~ 486 (561)
||+++.. +..+.++| ++.. |.. . ++.++
T Consensus 404 ~g~~~~~-~~g~~~~~~~~~l---p~~-------------------~-------~~~~~--------------------- 432 (500)
T 3tcm_A 404 EGITCNE-AEGAMYVFPQICL---PQK-------------------A-------IEAAK--------------------- 432 (500)
T ss_dssp TTEECCC-CCBTTEECCEECC---CHH-------------------H-------HHHHH---------------------
T ss_pred CCcEEec-CCeEEEEeeeecC---chh-------------------h-------HHHHH---------------------
Confidence 9998864 44455443 1110 000 0 00000
Q ss_pred ceeeecCCCcHHHHHH-HHHHHhCCcEEEEeee---ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9807 487 LVCFRLKGPNEINEKL-LKRINGNGKIHLVPSK---IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKEE 557 (561)
Q Consensus 487 ~v~f~~~~~~~~~~~l-~~~L~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~~ 557 (561)
..+... ...+ .+.|.+.|..++.+.. ..+...+|++++ +++++++++++.|.++.+++.++.
T Consensus 433 -----~~g~~~-~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~---~~~e~i~~~i~~l~~~~~~~~~~~ 498 (500)
T 3tcm_A 433 -----AANKAP-DAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL---PQEDKIPAVISRFTVFHEAFMSEY 498 (500)
T ss_dssp -----HHTSCH-HHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC---SCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred -----hcCCCc-HHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC---CCHHHHHHHHHHHHHHHHHHHHHh
Confidence 000111 1122 3445556755554322 245678999977 466799999999999988876543
No 127
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.77 E-value=3.1e-17 Score=168.63 Aligned_cols=290 Identities=14% Similarity=0.050 Sum_probs=172.6
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc-eEEeccc--chH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN-LIASPAC--TEL 208 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~-~vv~~s~--~s~ 208 (561)
.++.+++++++|.+. .+|++|||+||..++.+.... +++ +++.... ++.
T Consensus 51 ~~l~~~la~~~~~~~-----------~i~~~~g~~a~~~a~~~~~~~-----------------g~~~vvi~~~~~~~~~ 102 (359)
T 3pj0_A 51 EDFETKIAKILGKQS-----------AVFFPSGTMAQQIALRIWADR-----------------KENRRVAYHPLSHLEI 102 (359)
T ss_dssp HHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHHHH-----------------HTCCEEEECTTCHHHH
T ss_pred HHHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHHHhc-----------------CCCcEEEEeccceeee
Confidence 444557788888764 388899999998888776543 123 3443322 222
Q ss_pred H---HHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC-ccccCHHHH---HHHHhhcCce
Q psy9807 209 E---VVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC-CAFDCLEEI---GQVCRQKDVW 281 (561)
Q Consensus 209 ~---kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t-G~idpl~eI---~~ia~~~~~~ 281 (561)
. ..+...|.+++.+|.+++.+|+++|+++ .+ .+.+|+++...+.+ |.+.|.+++ +++|++||+|
T Consensus 103 ~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~-~~--------~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~ 173 (359)
T 3pj0_A 103 HEQDGLKELQQITPLLLGTANQLLTIDDIKSL-RE--------PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGIS 173 (359)
T ss_dssp SSTTHHHHHHCCEEEECSCTTSCCCHHHHHTC-SS--------CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCE
T ss_pred hhcchHHHhcCceEEecCCcCCCcCHHHHHhc-cC--------CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 2 1224568888888887789999999887 33 45566665554444 788765555 9999999999
Q ss_pred EEechhcccccc--cCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCC
Q psy9807 282 LHVDAAYAGSAF--ICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYR 359 (561)
Q Consensus 282 lhVDaA~gg~~~--~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (561)
+|+|+||..+.. ......... ..+|+++.++||+++.|.| |++ +.+++.+.........+ . +....
T Consensus 174 li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~~-~~~~~l~~~~~~~~~~~-~----~~~~~-- 241 (359)
T 3pj0_A 174 LHLDGARLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIAG-AIL-AGNDDFVQEAKIWKRRY-G----GDLIS-- 241 (359)
T ss_dssp EEEEETTCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSSC-EEE-EECHHHHHHHHHHHHHT-T----CCCSC--
T ss_pred EEEECcchhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcce-EEE-ECCHHHHHHHHHHHHHh-C----CCcch--
Confidence 999999764321 111111111 2459999999999998865 444 44554443321100000 0 00000
Q ss_pred cccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-ccccccceeeecccCccccccccch
Q psy9807 360 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI-YEVLMGLVCFRLKHWQIPLGRRFRS 438 (561)
Q Consensus 360 ~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~ 438 (561)
-...+.....+++ ...+.+++..++++++.+.|+++|++++. .++..+.+.+++..
T Consensus 242 -------~~~~~~a~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~----------- 298 (359)
T 3pj0_A 242 -------LYPYILSADYYFE-----KRIGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFEN----------- 298 (359)
T ss_dssp -------CHHHHHHHHHHHH-----HHGGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESS-----------
T ss_pred -------hHHHHHHHHHHHH-----HHHHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecC-----------
Confidence 0001111112221 12245566788899999999999999986 45566665543321
Q ss_pred hhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee-
Q psy9807 439 LKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS- 517 (561)
Q Consensus 439 ~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~- 517 (561)
+.......+.+.|.+.|..+..+.
T Consensus 299 -------------------------------------------------------~~~~~~~~l~~~l~~~GV~v~~g~~ 323 (359)
T 3pj0_A 299 -------------------------------------------------------SADEIGAILTKIQDETGVGISGYLQ 323 (359)
T ss_dssp -------------------------------------------------------CHHHHHHHHHHHHHHHCEECCSCCE
T ss_pred -------------------------------------------------------ccchhHHHHHHHHHhcCcEecCCcc
Confidence 001124567788888875544322
Q ss_pred -eECCEEEEEEEecCCC--CCHHHHHHHHHHHHH
Q psy9807 518 -KIRDVYFLRMAVCSRY--SESSDMIYSWNEIKT 548 (561)
Q Consensus 518 -~~~g~~~lR~~~~~~~--t~~~di~~l~~~l~~ 548 (561)
...+..++|+++...+ .+.+++++.++.|.+
T Consensus 324 ~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~ 357 (359)
T 3pj0_A 324 EKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEK 357 (359)
T ss_dssp EEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHH
T ss_pred ccCCCceEEEEEecCccccCCHHHHHHHHHHHHh
Confidence 2357789999886443 456777777766654
No 128
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.77 E-value=2.7e-16 Score=165.86 Aligned_cols=247 Identities=12% Similarity=-0.002 Sum_probs=157.7
Q ss_pred HHHHHhhcccccccccc-ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 107 ADILSDSIACIGFTWIA-SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 107 ~~~l~~~~n~~~~~~~~-sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
.+.+...++.+ .|.. ++...++++.+ ++++|.+ ..++|+|||+|+..++.+.+ .
T Consensus 35 ~~a~~~~~~~~--~y~~~~~~~~~l~~~l----a~~~~~~-----------~v~~~~ggt~al~~~l~~l~-~------- 89 (424)
T 2po3_A 35 YERLDRALDSQ--WLSNGGPLVREFEERV----AGLAGVR-----------HAVATCNATAGLQLLAHAAG-L------- 89 (424)
T ss_dssp HHHHHHHHHHT--CCSSSCHHHHHHHHHH----HHHHTSS-----------EEEEESCHHHHHHHHHHHHT-C-------
T ss_pred HHHHHHHHhcC--CcccCCHHHHHHHHHH----HHHhCCC-----------eEEEeCCHHHHHHHHHHHcC-C-------
Confidence 34444444432 2333 45556666655 5555653 46999999999988877642 0
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC 262 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t 262 (561)
++++++.... .+...++...|.+++.+|. . ++.+|+++|+++|.+ .+.+|+++. .+
T Consensus 90 ----------gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~---~t 148 (424)
T 2po3_A 90 ----------TGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTP--------RTSAVVGVH---LW 148 (424)
T ss_dssp ----------CSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCT--------TEEEEEEEC---GG
T ss_pred ----------CCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCc--------CCcEEEEEC---CC
Confidence 1245555444 6777778888999999998 3 788999999998865 456666543 68
Q ss_pred ccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCC--ccccccccceeEEecChhhHHHhh
Q psy9807 263 CAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPH--KWMLVTFDCSAMWLKDPSWVVNAF 340 (561)
Q Consensus 263 G~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~H--K~l~~P~g~g~l~~r~~~~l~~~~ 340 (561)
|.+.|+++|+++|++||+++++|++|+.+..+.. +. +. ...|.++.++| |++++ ...|+++.+++.......
T Consensus 149 G~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~--~~-~~--~~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~ 222 (424)
T 2po3_A 149 GRPCAADQLRKVADEHGLRLYFDAAHALGCAVDG--RP-AG--SLGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIR 222 (424)
T ss_dssp GCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETT--EE-TT--SSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCEEEEECccccCCeECC--ee-cc--cccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHH
Confidence 9999999999999999999999999984332221 11 11 12377777766 98875 556766665454433221
Q ss_pred cc-CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 341 NV-DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 341 ~~-~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
.. ...+.. ..... ......++..+..+.++. ..++++++.++..++++++.+.|+++|++++..+
T Consensus 223 ~~~~~~~~~------~~~~~--~~g~~~~~~~~~aa~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 288 (424)
T 2po3_A 223 ALHNFGFDL------PGGSP--AGGTNAKMSEAAAAMGLT--SLDAFPEVIDRNRRNHAAYREHLADLPGVLVADH 288 (424)
T ss_dssp HHHBTTTTC------TTCCT--TCCCBCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCG
T ss_pred HHHhcCccc------ccccc--ccCcCCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCC
Confidence 11 000000 00000 111222344455554443 3456788889999999999999999889988763
No 129
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.77 E-value=5.6e-17 Score=168.76 Aligned_cols=306 Identities=10% Similarity=0.030 Sum_probs=193.1
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++.+.+.+|+.+..|.+-+ ....++|+|||+++..++.+..+ + ++.+
T Consensus 63 ~y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~g~~~al~~~~~~l~~----------~-------gd~V 118 (385)
T 1b5p_A 63 KYAPPAGIPELREALAEKFRRENGLSVT-------PEETIVTVGGSQALFNLFQAILD----------P-------GDEV 118 (385)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHTTCCCCC-------GGGEEEESHHHHHHHHHHHHHCC----------T-------TCEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCC-------hHHEEEcCChHHHHHHHHHHhcC----------C-------CCEE
Confidence 3433344678999999999988886421 02579999999998777655311 0 2345
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIG 272 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~ 272 (561)
++.... .++..+++..|.+++.+|. . ++.+|+++|++++.+ .+.+|+.+...+.||.+-| +++|+
T Consensus 119 lv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~p~NPtG~~~~~~~l~~i~ 190 (385)
T 1b5p_A 119 IVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP--------RTKALVVNSPNNPTGAVYPKEVLEALA 190 (385)
T ss_dssp EEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC--------CCEEEEEeCCCCCCCCCcCHHHHHHHH
Confidence 555555 6667777888999999998 3 457999999998866 4667778788889999855 99999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCcc-ccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE-LADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHD 350 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~ 350 (561)
++|++||+++++|.+|+....-. .... +..+. ..+.+..+++|+++.|. -+|+++.+ +..+.........+
T Consensus 191 ~~~~~~~~~li~De~~~~~~~~~-~~~~-~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~-~~~~~~l~~~~~~~---- 263 (385)
T 1b5p_A 191 RLAVEHDFYLVSDEIYEHLLYEG-EHFS-PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGP-KEVIKAMASVSRQS---- 263 (385)
T ss_dssp HHHHHTTCEEEEECTTTTCBSSS-CCCC-GGGTCTTTEEEEEESTTTTTCGGGCCEEEECC-HHHHHHHHHHHHTT----
T ss_pred HHHHHcCCEEEEEccchhcccCC-CCCC-HHHcCCCCEEEEEechhhcCCcccceEEEEeC-HHHHHHHHHHHhhc----
Confidence 99999999999999998543211 1101 11111 23678889999987552 27888774 33332211110000
Q ss_pred CCCCCCCCCcccccCcCCcchHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeec
Q psy9807 351 QQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL-----GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL 425 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~-----g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~ 425 (561)
.-....+..+++...+ +.+.+++..++..+..+++.+.|++. |+++..+.....+..++
T Consensus 264 ---------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 327 (385)
T 1b5p_A 264 ---------------TTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVLMDT 327 (385)
T ss_dssp ---------------TCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSBTTEEEEEC
T ss_pred ---------------cCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEec
Confidence 0001222333333333 34557778888888899999999887 77765433222211111
Q ss_pred ccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHH
Q psy9807 426 KHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKR 505 (561)
Q Consensus 426 ~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~ 505 (561)
.. .+.+ ..++.+.
T Consensus 328 ~~-----------------------------------------------------------------~~~~--~~~l~~~ 340 (385)
T 1b5p_A 328 SP-----------------------------------------------------------------IAPD--EVRAAER 340 (385)
T ss_dssp TT-----------------------------------------------------------------TCSS--HHHHHHH
T ss_pred CC-----------------------------------------------------------------CCCC--HHHHHHH
Confidence 10 0111 3467888
Q ss_pred HHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 506 INGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 506 L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
|.+.|..+..+.......++|++++ ++++++++.++.|.++.
T Consensus 341 l~~~gv~v~~g~~f~~~~~iRis~~---~~~~~i~~~l~~l~~~l 382 (385)
T 1b5p_A 341 LLEAGVAVVPGTDFAAFGHVRLSYA---TSEENLRKALERFARVL 382 (385)
T ss_dssp HHHTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHGGGGC
T ss_pred HHHCCeEEecccccCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence 8877755444333222358999966 57788999888886653
No 130
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.77 E-value=1.7e-17 Score=174.57 Aligned_cols=301 Identities=11% Similarity=0.013 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE 207 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s 207 (561)
.+++.+.+++++++|.+.. -++++|||+|+..++.++... ++.+++.... .+
T Consensus 78 ~~~~~a~~~~~~~~~~~~~----------~v~~~~Gs~a~~~al~~~~~~-----------------gd~Vi~~~~~~~~ 130 (425)
T 3ecd_A 78 EVEALAIERVKRLFNAGHA----------NVQPHSGAQANGAVMLALAKP-----------------GDTVLGMSLDAGG 130 (425)
T ss_dssp HHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCCT-----------------TCEEEEECC----
T ss_pred HHHHHHHHHHHHHhCCCCc----------eeecCchHHHHHHHHHHccCC-----------------CCEEEEccccccc
Confidence 5666666889999998753 256899999998877654210 1234444333 33
Q ss_pred -HHHHHH--hccCC--eEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCc
Q psy9807 208 -LEVVML--DWLGK--MLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDV 280 (561)
Q Consensus 208 -~~kaa~--~~g~~--v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~ 280 (561)
+..++. ..+.. ++.++. +++.+|+++|++++.+ . .+.+|+++. +..|...++++|+++|++||+
T Consensus 131 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~--~-----~~~~v~~~~--~~~~~~~~l~~i~~l~~~~~~ 201 (425)
T 3ecd_A 131 HLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQ--H-----KPSLIIAGF--SAYPRKLDFARFRAIADSVGA 201 (425)
T ss_dssp --------------CEEEEECCCTTTSSCCHHHHHHHHHH--H-----CCSEEEEEC--SCCCSCCCHHHHHHHHHHHTC
T ss_pred ceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhh--c-----CCcEEEEcc--ccCCCcCCHHHHHHHHHHcCC
Confidence 222322 34443 344554 4579999999999975 2 355666653 344888999999999999999
Q ss_pred eEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCc
Q psy9807 281 WLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRH 360 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (561)
++++|++|+.+.......... +..+|+++.++||++.+|. .|+++.++...... +.. +.....
T Consensus 202 ~li~De~~~~g~~~~~~~~~~---~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~~~-~~~---~~~~~~--------- 264 (425)
T 3ecd_A 202 KLMVDMAHIAGVIAAGRHANP---VEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIAKK-INS---AVFPGL--------- 264 (425)
T ss_dssp EEEEECGGGHHHHHTTSSCCG---GGTCSEEEEESSGGGCCCS-CEEEEESCHHHHHH-HHH---HHC------------
T ss_pred EEEEECcChHhhhhcccccCc---hhcCcEEEecCCcccCCCC-cEEEEeCCHHHHHH-HHh---hhCccc---------
Confidence 999999976555443322222 2336999999999997776 47777765433222 211 000000
Q ss_pred ccccCcC-CcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccc-cccceeeecccCccccccccch
Q psy9807 361 WQIPLGR-RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV-LMGLVCFRLKHWQIPLGRRFRS 438 (561)
Q Consensus 361 ~~~~~sr-~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~ 438 (561)
..+. ......++.++..+..++++++.++..++++++.+.|++. ++++..+. ..+.+.+.+.+.
T Consensus 265 ---~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~---------- 330 (425)
T 3ecd_A 265 ---QGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLLVDLRPK---------- 330 (425)
T ss_dssp -----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGG----------
T ss_pred ---cCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEEEEeCCC----------
Confidence 0000 0122344455555555778889999999999999999985 88877543 334433322210
Q ss_pred hhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEee-
Q psy9807 439 LKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPS- 517 (561)
Q Consensus 439 ~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~- 517 (561)
+. ....+.+.|.+.|.......
T Consensus 331 -------------------------------------------------------~~--~~~~~~~~l~~~gi~v~~~~~ 353 (425)
T 3ecd_A 331 -------------------------------------------------------GL--KGAQVEQALERAGITCNKNGI 353 (425)
T ss_dssp -------------------------------------------------------TC--CHHHHHHHHHHTTEECEECCC
T ss_pred -------------------------------------------------------CC--CHHHHHHHHHHcCCEeccccc
Confidence 00 12356677777775543211
Q ss_pred -----eECCEEEEEEEecCC---CCCHHHHHHHHHHHHHHHHHH
Q psy9807 518 -----KIRDVYFLRMAVCSR---YSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 518 -----~~~g~~~lR~~~~~~---~t~~~di~~l~~~l~~~~~~~ 553 (561)
...+...+|+++... ..+++++++++++|.++.++.
T Consensus 354 p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 354 PFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp TTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 111234799984432 235899999999999887765
No 131
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.77 E-value=3.9e-17 Score=171.18 Aligned_cols=257 Identities=10% Similarity=0.004 Sum_probs=166.1
Q ss_pred HHHHHHhhcccc-ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 106 VADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 106 ~~~~l~~~~n~~-~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
+.+.+...+... ...|...+...++++.+.+|+.+.+|.+-+ .....++|+|||+++..++.+....
T Consensus 65 v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~------~~~~v~~t~G~~~al~~~~~~l~~~------ 132 (404)
T 2o1b_A 65 IIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLD------KEDEVCILYGTKNGLVAVPTCVINP------ 132 (404)
T ss_dssp HHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCC------TTTSEEEESSHHHHHHHHHHHHCCT------
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC------CcccEEEcCCcHHHHHHHHHHhcCC------
Confidence 334444444321 223433345688999999999998897511 0025799999999998777654210
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
++++++.... .++..++...|.+++.+|. . +..+|+++|++++.. .+.+|+++..++.
T Consensus 133 -----------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~--------~~~~v~l~~p~np 193 (404)
T 2o1b_A 133 -----------GDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIID--------KTKLIYLTYPNNP 193 (404)
T ss_dssp -----------TCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH--------HEEEEEECSSCTT
T ss_pred -----------CCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhcc--------CceEEEEcCCCCC
Confidence 2345555444 6777778888999999998 4 446899999999865 4667777777778
Q ss_pred CccccC---HHHHHHHHhhcCceEEechhcccccccCcccccccc--CccccceeeecCCcccccc-ccceeEEecChhh
Q psy9807 262 CCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMK--GVELADSFNFNPHKWMLVT-FDCSAMWLKDPSW 335 (561)
Q Consensus 262 tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~--gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~ 335 (561)
||.+-| +++|+++|++||+++++|++|+...... ....... +....|.++.++||+++.| ..+|+++. ++..
T Consensus 194 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~ 271 (404)
T 2o1b_A 194 TGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVG-NKDM 271 (404)
T ss_dssp TCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEE-CHHH
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEec-CHHH
Confidence 999875 7899999999999999999998643211 1111111 1113478899999999755 34788776 4433
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+.........+ . . ....+..+++...+ +...++++.++..++.+++.+.|++. ++++.
T Consensus 272 ~~~l~~~~~~~-~----------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 331 (404)
T 2o1b_A 272 IQALKKYQTHT-N----------------A--GMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFV 331 (404)
T ss_dssp HHHHHHHHHHH-C----------------C--CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEE
T ss_pred HHHHHHHHhhc-c----------------C--CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCeec
Confidence 32211110000 0 0 01223333333333 24567888888889999999999987 77765
Q ss_pred cc
Q psy9807 414 YE 415 (561)
Q Consensus 414 ~~ 415 (561)
.+
T Consensus 332 ~~ 333 (404)
T 2o1b_A 332 HA 333 (404)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 132
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.77 E-value=1.3e-16 Score=170.17 Aligned_cols=377 Identities=10% Similarity=-0.004 Sum_probs=198.0
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCc
Q psy9807 67 DTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPK 146 (561)
Q Consensus 67 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~ 146 (561)
....+-.+.+...-..-..-...-.|++|.++.+. +.+. +.+...++.....|..+|...++++ ++++++|.+
T Consensus 18 ~~~~~~~~~~~~~g~~~~~~~~~~~ylD~~~~~~~-~~v~-~a~~~~l~~~~~~y~~~~~~~~l~~----~la~~~~~~- 90 (467)
T 2oqx_A 18 TTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGT-GAVT-QSMQAAMMRGDEAYSGSRSYYALAE----SVKNIFGYQ- 90 (467)
T ss_dssp CCHHHHHHHHHHTTSCGGGSCGGGCSEECSCCSSC-SCCC-HHHHHHTTSCCCCSSSCHHHHHHHH----HHHHHHCCS-
T ss_pred ccHHHHHHHHHHcCCCceeccCCCeeEecccCCCc-HHHH-HHHHHHhccCcceeccCchhHHHHH----HHHHHhCcC-
Confidence 35555555555432111111223457777654444 3333 2333444433334555666556655 556666663
Q ss_pred cccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-cceEEeccc-chHHHHHHhccCCeEEe--
Q psy9807 147 EFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII-ANLIASPAC-TELEVVMLDWLGKMLDL-- 222 (561)
Q Consensus 147 ~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~-~~~vv~~s~-~s~~kaa~~~g~~v~~v-- 222 (561)
.++||+|||+||..|+.+++...... .+. .. +.+++...+ .+........+..+...
T Consensus 91 ----------~v~~t~~gt~A~~~al~~~~~~~~~~---~G~------~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~ 151 (467)
T 2oqx_A 91 ----------YTIPTHQGRGAEQIYIPVLIKKREQE---KGL------DRSKMVAFSNYFFDTTQGHSQINGCTVRNVYI 151 (467)
T ss_dssp ----------EEEEEC--CCSHHHHHHHHHHHHHHH---HCC------CTTTCEEEESSCCHHHHHHHHHTTCEEEECBC
T ss_pred ----------cEEEcCCcHHHHHHHHHHHhcccccc---CCC------CccceEEecccccccchhhhhccCcceeeccc
Confidence 47999999999999999886531110 010 00 244443222 33222333444443322
Q ss_pred ----eC-----CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC-ccc---cCHHHHHHHHhhcCceEEechhcc
Q psy9807 223 ----PK-----EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC-CAF---DCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 223 ----~~-----~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t-G~i---dpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
+. .++.+|+++|+++|.+ .. ..++.+|+++..++.+ |.+ +++++|+++|++||+|+|+|+||+
T Consensus 152 ~~~~~~~~~~~~~~~~d~~~Le~~i~~--~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~ 227 (467)
T 2oqx_A 152 KEAFDTGVRYDFKGNFDLEGLERGIEE--VG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 227 (467)
T ss_dssp TTTTCTTSCCTTTTCBCHHHHHHHHHH--HC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTH
T ss_pred cccccCCCCCCccCCcCHHHHHHHHHh--cC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhh
Confidence 21 2467899999999975 21 1145667776666665 654 578999999999999999998876
Q ss_pred c-ccc--------cCc-cccccc-cCccccceeeecCCccccccccceeEEecCh---hhHHHhhccCCCccccCCCCCC
Q psy9807 290 G-SAF--------ICP-ENRYLM-KGVELADSFNFNPHKWMLVTFDCSAMWLKDP---SWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 290 g-~~~--------~~~-~~~~~~-~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~---~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
. ... ... ...... ...+.+|++++++||+++.|.| |+++.++. +.+.. +. .+.... ++.
T Consensus 228 ~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~-~~---~~~~~~--~~~ 300 (467)
T 2oqx_A 228 AENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTE-CR---TLCVVQ--EGF 300 (467)
T ss_dssp HHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHH-HH---HHHHHT--TSS
T ss_pred hhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecChhHHHHHHH-HH---Hhhhcc--CCc
Confidence 4 221 111 011110 0013468999999999998854 55555554 22221 11 110000 000
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCcccccc
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYL-QEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGR 434 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~-~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~ 434 (561)
..+ .. ..+..+. ++...-.+.+ ++.+++..++++++.+.|++. ++++. +.....+.+++.+.. + .
T Consensus 301 ~~~------~~--~~~~~~~-al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~-~-~- 366 (467)
T 2oqx_A 301 PTY------GG--LEGGAME-RLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLL-P-H- 366 (467)
T ss_dssp CCC------CC--CCHHHHH-HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHS-T-T-
T ss_pred ccc------cc--hhhhHHH-HHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhc-c-c-
Confidence 000 00 1111111 1211001112 234566678889999999988 88877 555555555332100 0 0
Q ss_pred ccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHH-HHHHHHHH-HhCCcE
Q psy9807 435 RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEI-NEKLLKRI-NGNGKI 512 (561)
Q Consensus 435 ~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~-~~~l~~~L-~~~g~~ 512 (561)
....++ ...+.+.| .+.|..
T Consensus 367 ----------------------------------------------------------~~~~~~~~~~l~~~L~~~~gv~ 388 (467)
T 2oqx_A 367 ----------------------------------------------------------IPADQFPAQALACELYKVAGIR 388 (467)
T ss_dssp ----------------------------------------------------------SCGGGCHHHHHHHHHHHHHCEE
T ss_pred ----------------------------------------------------------CCcccccHHHHHHHHHHhcCce
Confidence 001111 34567777 666654
Q ss_pred EEEeee-------------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 513 HLVPSK-------------IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 513 ~~~~~~-------------~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
...... ..+..++|+++....++++||+++++.|+++.++
T Consensus 389 ~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 389 AVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp CEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHS
T ss_pred ecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhh
Confidence 432121 0123689998664327899999999999987654
No 133
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.76 E-value=6.6e-17 Score=168.85 Aligned_cols=214 Identities=13% Similarity=0.047 Sum_probs=147.3
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++.+.+++++|.+ ..++++|||+||..++.++... ++++++.... .+...
T Consensus 69 ~~l~~~la~~~g~~-----------~~~~~~sGt~A~~~al~~~~~~-----------------gd~Vi~~~~~y~~~~~ 120 (392)
T 3qhx_A 69 TALEAALAAVEDAA-----------FGRAFSSGMAAADCALRAMLRP-----------------GDHVVIPDDAYGGTFR 120 (392)
T ss_dssp HHHHHHHHHHTTCS-----------EEEEESSHHHHHHHHHHHHCCT-----------------TCEEEEETTCCHHHHH
T ss_pred HHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHHHHhCC-----------------CCEEEEeCCCcchHHH
Confidence 34455668888875 3689999999998887754210 1244444444 33434
Q ss_pred HH----HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEech
Q psy9807 211 VM----LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 211 aa----~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDa 286 (561)
.+ ...|.+++.+|. .|+++|+++|++ .+.+|++...++.+|.+.|+++|+++|++||+++|+|+
T Consensus 121 ~~~~~~~~~g~~~~~v~~----~d~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~ 188 (392)
T 3qhx_A 121 LIDKVFTGWNVEYTPVAL----ADLDAVRAAIRP--------TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDN 188 (392)
T ss_dssp HHHHTGGGGTCEEEEECT----TCHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHhcCcEEEEeCC----CCHHHHHHhhCC--------CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEEC
Confidence 33 446778888884 389999999976 57788889999999999999999999999999999999
Q ss_pred hcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccccc
Q psy9807 287 AYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIP 364 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (561)
+|+.+....+. -. .+|.++.++||+++.+.+ +|+++.++........... . .
T Consensus 189 ~~~~~~~~~~~----~~---~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~-~------------------~ 242 (392)
T 3qhx_A 189 TFASPALQQPL----SL---GADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQ-N------------------G 242 (392)
T ss_dssp TTTCTTTCCGG----GG---TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHH-H------------------H
T ss_pred CCcccccCChH----Hh---CCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHH-H------------------h
Confidence 99854322221 11 359999999999997753 7777777654333211100 0 0
Q ss_pred CcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 365 LGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 365 ~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
.+.....+..|+.++.+. .+..++++..++++++.+.|++.|.+.-+
T Consensus 243 ~g~~~~~~~~~~~~~~l~--~l~~~~~~~~~~~~~l~~~L~~~~~v~~v 289 (392)
T 3qhx_A 243 AGAVPGPFDAYLTMRGLK--TLVLRMQRHSENAAAVAEFLAEHPAISTV 289 (392)
T ss_dssp HCCCCCHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred cCCCCCHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHHhcCCCcceE
Confidence 111234455666555443 35667888899999999999998887544
No 134
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.76 E-value=8.3e-17 Score=168.98 Aligned_cols=326 Identities=10% Similarity=-0.003 Sum_probs=199.2
Q ss_pred HHHHHHhhcccc-ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 106 VADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 106 ~~~~l~~~~n~~-~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
+.+.+...+... ...|...+...++++.+.+|+.+.+|.+-+. ....++|+|||+|+..++.+...
T Consensus 55 v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~------~~~v~~t~g~~~a~~~~~~~~~~------- 121 (412)
T 2x5d_A 55 IVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDP------ESEAIVTIGSKEGLAHLMLATLD------- 121 (412)
T ss_dssp HHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCT------TTSEEEESCHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC------CcCEEEcCChHHHHHHHHHHhCC-------
Confidence 444445554432 2234334556789999999999888864210 02679999999999887765321
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CC--CccChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EF--LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~--g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
+ ++++++.... .++..++...|.+++.+|. .+ ..+|+++|++++.+ .+.+|+++...+
T Consensus 122 ---~-------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~--------~~~~v~l~~p~n 183 (412)
T 2x5d_A 122 ---H-------GDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIP--------KPRMMILGFPSN 183 (412)
T ss_dssp ---T-------TCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEES--------CCSEEEEESSCT
T ss_pred ---C-------CCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhccc--------CceEEEECCCCC
Confidence 0 1345555444 6667777778899999998 43 35889999988865 455666677778
Q ss_pred CCccccC---HHHHHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCccccccc-cceeEEecChh
Q psy9807 261 NCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPS 334 (561)
Q Consensus 261 ~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~ 334 (561)
.||.+-| +++|+++|++||+++++|++|+.+.......... +.+....|.++.++||+++.|. .+|+++. ++.
T Consensus 184 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~ 262 (412)
T 2x5d_A 184 PTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVG-NPE 262 (412)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEE-CHH
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEc-CHH
Confidence 8998865 7889999999999999999998754322111111 1111245889999999997443 4788887 433
Q ss_pred hHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 335 WVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.+.. +.....+.. .....+..+++...+ +.+.++++.++..++.+++.+.|++. ++++
T Consensus 263 ~~~~-l~~~~~~~~------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 322 (412)
T 2x5d_A 263 LVSA-LARIKSYHD------------------YGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GWMV 322 (412)
T ss_dssp HHHH-HHHHHHHHC------------------CCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH-TCCC
T ss_pred HHHH-HHHHHhhhc------------------cCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEe
Confidence 3322 211000000 001222233333333 34567888888889999999999887 7766
Q ss_pred eccccccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeee
Q psy9807 413 IYEVLMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 491 (561)
Q Consensus 413 ~~~~~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~ 491 (561)
..+ ..+. +.+++..
T Consensus 323 ~~~-~~g~~~~~~~~~---------------------------------------------------------------- 337 (412)
T 2x5d_A 323 ENP-KASMYVWAKIPE---------------------------------------------------------------- 337 (412)
T ss_dssp CCC-SBSSEEEEECCT----------------------------------------------------------------
T ss_pred cCC-CeeeEEEEEcCC----------------------------------------------------------------
Confidence 533 3332 3333210
Q ss_pred cCCCc-HHHHHHHHHHHh-CCcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 492 LKGPN-EINEKLLKRING-NGKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 492 ~~~~~-~~~~~l~~~L~~-~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+.. ....++.+.|.+ .|..+..+... .+..++|++++. ++++++++++.|.++.+++
T Consensus 338 --~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 338 --PYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE---NRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp --TTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHHHHHT
T ss_pred --ccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHhc
Confidence 000 013467777765 46544433222 134589999764 6789999999998887653
No 135
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.76 E-value=8.1e-17 Score=167.95 Aligned_cols=288 Identities=13% Similarity=0.049 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
.....++.+++++++|.+.+ ..++|+|||+|+..++.+++... . ++++++....
T Consensus 86 ~~~~~~l~~~la~~~~~~~~---------~v~~~~gg~~a~~~al~~~~~~~------~---------~~~vi~~~~~y~ 141 (395)
T 1vef_A 86 TPMRGEFYRTLTAILPPELN---------RVFPVNSGTEANEAALKFARAHT------G---------RKKFVAAMRGFS 141 (395)
T ss_dssp CHHHHHHHHHHHHTSCTTEE---------EEEEESSHHHHHHHHHHHHHHHH------S---------CCEEEEETTCCC
T ss_pred CHHHHHHHHHHHHhcCCCcC---------EEEEcCcHHHHHHHHHHHHHHHh------C---------CCeEEEEcCCcC
Confidence 34566677788888876543 57999999999998887764221 0 1245554433
Q ss_pred chHHHHHHhccCC------------eEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HH
Q psy9807 206 TELEVVMLDWLGK------------MLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LE 269 (561)
Q Consensus 206 ~s~~kaa~~~g~~------------v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~ 269 (561)
.+...++...|.+ +..+| ..|+++|+++|.+ .+.+|+++...+.||.+.| ++
T Consensus 142 ~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~----~~d~~~l~~~i~~--------~~~~v~~~~~~~~tG~~~~~~~~l~ 209 (395)
T 1vef_A 142 GRTMGSLSVTWEPKYREPFLPLVEPVEFIP----YNDVEALKRAVDE--------ETAAVILEPVQGEGGVRPATPEFLR 209 (395)
T ss_dssp CSSHHHHHTCCCHHHHGGGCSCSSCEEEEC----TTCHHHHHHHCCT--------TEEEEEECSEETTTTSEECCHHHHH
T ss_pred CCchhhhhhcCCcccccccCCCCCCeeEeC----CCcHHHHHHHhcc--------CEEEEEEeCccCCCCccCCCHHHHH
Confidence 2344455555543 23333 3689999998865 5677888777778999877 99
Q ss_pred HHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCcccc
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
+|+++|++||+++++|++|++.............++ .+|++ ++||+++.+.++|++++++. .+ ..+... .+
T Consensus 210 ~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~-~~d~~--s~sK~~~~g~~~G~~~~~~~-~~-~~l~~~-~~--- 280 (395)
T 1vef_A 210 AAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGI-VPDIL--TLAKALGGGVPLGVAVMREE-VA-RSMPKG-GH--- 280 (395)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEE--EECGGGGTTSSCEEEEEEHH-HH-HTSCTT-SS---
T ss_pred HHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCC-CCCEE--EEcccccCCCceEEEEehHH-HH-hhhccC-Cc---
Confidence 999999999999999999995321111111011122 35766 55999998888999998654 22 222210 00
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--ccccccceeeeccc
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI--YEVLMGLVCFRLKH 427 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~--~~~~~~~v~f~~~~ 427 (561)
.. .+ ..-.+....+..+++.+.. .++.++..++++++.+.|++.+. +++ .++..+++.
T Consensus 281 ---~~-----~~---~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g~~~~----- 340 (395)
T 1vef_A 281 ---GT-----TF---GGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPS-PKIREVRGMGLMVG----- 340 (395)
T ss_dssp ---CC-----SS---TTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEETTEEE-----
T ss_pred ---CC-----Cc---CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEEEEEE-----
Confidence 00 00 0001122223334444332 35677888899999999988632 211 111222322
Q ss_pred CccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHH
Q psy9807 428 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRIN 507 (561)
Q Consensus 428 ~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~ 507 (561)
+.+... ..++.+.|.
T Consensus 341 --------------------------------------------------------------~~~~~~---~~~l~~~l~ 355 (395)
T 1vef_A 341 --------------------------------------------------------------LELKEK---AAPYIARLE 355 (395)
T ss_dssp --------------------------------------------------------------EEESSC---SHHHHHHHH
T ss_pred --------------------------------------------------------------EEEcCh---HHHHHHHHH
Confidence 332221 346778887
Q ss_pred -hCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 508 -GNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 508 -~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+.|.. +.+. +..++|+++. ..++++|+++++++|+++.
T Consensus 356 ~~~gi~-v~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 356 KEHRVL-ALQA---GPTVIRFLPP-LVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp HHHCEE-CEES---STTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred HHCCeE-EecC---CCCEEEEeCC-CCCCHHHHHHHHHHHHHHh
Confidence 77644 3332 3568999854 5678899999999998753
No 136
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.76 E-value=2e-16 Score=162.96 Aligned_cols=282 Identities=12% Similarity=0.011 Sum_probs=180.0
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka 211 (561)
++.+++++++|.+++ ..++|+|||+|+..++.+.... ++++++.... .++..+
T Consensus 69 ~lr~~la~~~g~~~~---------~i~~t~g~~~al~~~~~~l~~~-----------------gd~Vl~~~p~~~~~~~~ 122 (360)
T 3hdo_A 69 KLREVAGELYGFDPS---------WIIMANGSDEVLNNLIRAFAAE-----------------GEEIGYVHPSYSYYGTL 122 (360)
T ss_dssp HHHHHHHHHHTCCGG---------GEEEESSHHHHHHHHHHHHCCT-----------------TCEEEEESSSCTHHHHH
T ss_pred HHHHHHHHHhCcCcc---------eEEEcCCHHHHHHHHHHHHhCC-----------------CCEEEEcCCChHHHHHH
Confidence 445566777787654 6799999999998777653210 2345555544 677777
Q ss_pred HHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhccc
Q psy9807 212 MLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAG 290 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg 290 (561)
+...|.+++.+|. +++.+ +++++.+ .+.+|+.+...+.+|.+.|+++|.++|+++|+++++|++|+.
T Consensus 123 ~~~~g~~~~~v~~~~~~~~--~~l~~~~----------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~ 190 (360)
T 3hdo_A 123 AEVQGARVRTFGLTGDFRI--AGFPERY----------EGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAE 190 (360)
T ss_dssp HHHHTCEEEEECBCTTSSB--TTCCSSB----------CSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGG
T ss_pred HHHCCCEEEEeeCCCCCCH--HHHHhhc----------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHh
Confidence 8888999999998 55554 4333222 234677788889999999999999999999999999999986
Q ss_pred ccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCc
Q psy9807 291 SAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF 369 (561)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~ 369 (561)
.. ......... ....+.+..++||+++.| ..+|+++. +.............| ..
T Consensus 191 ~~--~~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~---------------------~~ 245 (360)
T 3hdo_A 191 FA--ESNALELVR-RHENVVVTRTLSKSYSLAGMRIGLAIA-RPEVIAALDKIRDHY---------------------NL 245 (360)
T ss_dssp GS--SCCCTHHHH-HCSSEEEEEESTTTTSCTTSCCEEEEC-CHHHHHHHHHHSCSC---------------------CS
T ss_pred hC--CcchhHHhc-cCCCEEEEecchHhhcCCccceeeEee-CHHHHHHHHHhCCCC---------------------CC
Confidence 31 111111111 112247788999999744 45677776 444333221111111 01
Q ss_pred chHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHh
Q psy9807 370 RSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLL 448 (561)
Q Consensus 370 ~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~ 448 (561)
..+..+++...+. .+.++++.++..++.+++.+.|++. ++++. ++..+.+.+++.
T Consensus 246 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~---------------------- 301 (360)
T 3hdo_A 246 DRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYDVI-PSQGNYLFATPP---------------------- 301 (360)
T ss_dssp CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSEEEEECT----------------------
T ss_pred CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEc-CCCccEEEEECC----------------------
Confidence 2233333333332 4457888889999999999999988 88765 333344333221
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEE
Q psy9807 449 GVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMA 528 (561)
Q Consensus 449 g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~ 528 (561)
+.+ ..++.+.|.+.|..........+..++|++
T Consensus 302 ---------------------------------------------~~~--~~~l~~~l~~~gi~v~~~~~~~~~~~iRis 334 (360)
T 3hdo_A 302 ---------------------------------------------DRD--GKRVYDGLYARKVLVRHFSDPLLAHGMRIS 334 (360)
T ss_dssp ---------------------------------------------TCC--HHHHHHHHHHTTEECBCCCSTTTTTSEEEE
T ss_pred ---------------------------------------------CCC--HHHHHHHHHHCCEEEEECCCCCCCCEEEEE
Confidence 111 346778888887544332222345689999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 529 VCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 529 ~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
++ +++|+++++++|+++.+.
T Consensus 335 ~~----~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 335 IG----TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp CC----CHHHHHHHHHHHHHHHC-
T ss_pred cC----CHHHHHHHHHHHHHHhcc
Confidence 65 678999999999987654
No 137
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.76 E-value=2.2e-16 Score=164.30 Aligned_cols=217 Identities=14% Similarity=0.050 Sum_probs=142.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++++ .+++++|.++ .+++++||+|+..++.++... ++++++.
T Consensus 50 ~~~~~~~l~~----~la~~~~~~~-----------~i~~~sGt~a~~~~~~~~~~~-----------------g~~vl~~ 97 (386)
T 1cs1_A 50 GNPTRDVVQR----ALAELEGGAG-----------AVLTNTGMSAIHLVTTVFLKP-----------------GDLLVAP 97 (386)
T ss_dssp CCHHHHHHHH----HHHHHHTCSE-----------EEEESSHHHHHHHHHHHHCCT-----------------TCEEEEE
T ss_pred CCccHHHHHH----HHHHHhCCCc-----------EEEeCCHHHHHHHHHHHHhCC-----------------CCEEEEe
Confidence 3444455555 5566666652 366677899998877664110 1244444
Q ss_pred ccc-chHHHH----HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PAC-TELEVV----MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~-~s~~ka----a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
... .+.... +...|.+++.+|. .|+++|+++|++ .+.+|+++..++.+|.+.|+++|+++|++
T Consensus 98 ~~~~~~~~~~~~~~~~~~g~~~~~~~~----~d~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 165 (386)
T 1cs1_A 98 HDCYGGSYRLFDSLAKRGCYRVLFVDQ----GDEQALRAALAE--------KPKLVLVESPSNPLLRVVDIAKICHLARE 165 (386)
T ss_dssp TTCCHHHHHHHHHHHTTTSCEEEEECT----TCHHHHHHHHHT--------CCSEEEEECSCTTTCCCCCHHHHHHHHHH
T ss_pred cCCcHhHHHHHHHHHHhcCCEEEEeCC----CCHHHHHHhhcc--------CCcEEEEeCCCCCCCcccCHHHHHHHHHH
Confidence 444 333332 3456778888883 389999999976 46688888999999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCccccccccc--eeEEecChhhHHHhhccCCCccccCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDC--SAMWLKDPSWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~--g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
||+++++|++|+++....+. . ..+|.++.++||+++.|.+. |+++++++............+
T Consensus 166 ~~~~li~De~~~~~~~~~~~----~---~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~--------- 229 (386)
T 1cs1_A 166 VGAVSVVDNTFLSPALQNPL----A---LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNI--------- 229 (386)
T ss_dssp TTCEEEEECTTTCTTTCCGG----G---GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHH---------
T ss_pred cCCEEEEECCCcccccCCcc----c---cCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhc---------
Confidence 99999999999876543221 1 13599999999999999874 888887643332211100000
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
+-....+..|.+++.+ +.+.++.++..++++++.+.+++++.+.
T Consensus 230 ----------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~l~ 273 (386)
T 1cs1_A 230 ----------GVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVK 273 (386)
T ss_dssp ----------TCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred ----------CCCCCHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 0001223334333322 2355667777888899999998876654
No 138
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.75 E-value=9.8e-17 Score=168.76 Aligned_cols=252 Identities=11% Similarity=0.017 Sum_probs=164.4
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|.......++.+.+.+|+.+.+|.+-+. ....+||+|||+++..++.+.... ++++
T Consensus 62 ~y~~~~g~~~lr~~la~~~~~~~g~~~~~------~~~i~~~~g~~~a~~~~~~~~~~~-----------------gd~v 118 (422)
T 3fvs_A 62 QYTKTFGYPPLTKILASFFGELLGQEIDP------LRNVLVTVGGYGALFTAFQALVDE-----------------GDEV 118 (422)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHTCCCCH------HHHEEEESHHHHHHHHHHHHHCCT-----------------TCEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCCC------CCcEEEECChHHHHHHHHHHHcCC-----------------CCEE
Confidence 34444456789999999999998875210 015799999999998777654210 2245
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-C----C--------CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-E----F--------LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF 265 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~----~--------g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i 265 (561)
++.... .++..++...|.+++.+|. . + +.+|+++|++++.+ .+.+|+++..++.+|.+
T Consensus 119 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~--------~~~~v~~~~p~nptG~~ 190 (422)
T 3fvs_A 119 IIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS--------RTKALVLNTPNNPLGKV 190 (422)
T ss_dssp EEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT--------TEEEEEEESSCTTTCCC
T ss_pred EEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCC--------CceEEEECCCCCCCCcC
Confidence 555444 6777778888999999988 5 3 36899999998876 56778888888999999
Q ss_pred c---CHHHHHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCcccccc-ccceeEEecChhhHHHh
Q psy9807 266 D---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNA 339 (561)
Q Consensus 266 d---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~ 339 (561)
- ++++|+++|++||+++++|.+|+............ +......+.+..++||+++.| ..+|+++.++ ..+...
T Consensus 191 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~~~~ 269 (422)
T 3fvs_A 191 FSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD-HIMKHL 269 (422)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH-HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCH-HHHHHH
Confidence 7 59999999999999999999998643221111111 111112357788999999744 5577777643 333221
Q ss_pred hccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh---------hHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 340 FNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL---------GVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~---------g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
....... .+ ....+..+++...+ ....++++.++..++.+++.+.|++. ++
T Consensus 270 ~~~~~~~-------------~~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 329 (422)
T 3fvs_A 270 RTVHQNS-------------VF------HCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GL 329 (422)
T ss_dssp HHHHHTT-------------TC------CCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TC
T ss_pred HHHHhhc-------------cC------CCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 1100000 00 01122222233332 23467788888999999999999988 88
Q ss_pred EEeccccccceee
Q psy9807 411 EVIYEVLMGLVCF 423 (561)
Q Consensus 411 ~l~~~~~~~~v~f 423 (561)
++..+.....+.+
T Consensus 330 ~~~~~~~~~~~~~ 342 (422)
T 3fvs_A 330 KPIIPQGSYFLIT 342 (422)
T ss_dssp EEEBCSBSSEEEE
T ss_pred eecCCCeeeEEEE
Confidence 8776654444443
No 139
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.75 E-value=1.8e-16 Score=161.20 Aligned_cols=208 Identities=11% Similarity=0.039 Sum_probs=136.3
Q ss_pred HHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHH
Q psy9807 134 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVM 212 (561)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa 212 (561)
+.+.+++++|.+. .+++++||+|+..++.+... + ++++++.... .+...++
T Consensus 3 l~~~la~~~g~~~-----------~i~~~sG~~a~~~~~~~~~~----------~-------g~~v~~~~~~~~~~~~~~ 54 (331)
T 1pff_A 3 LEGKIAKLEHAEA-----------CAATASGMGAIAASVWTFLK----------A-------GDHLISDDCLYGCTHALF 54 (331)
T ss_dssp HHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHHCC----------T-------TCEEEEESCCCHHHHHHH
T ss_pred HHHHHHHHhCCCe-----------EEEeCChHHHHHHHHHHhcC----------C-------CCEEEEcCCCcchHHHHH
Confidence 4556788888762 47778889998877765311 0 1245554444 4444443
Q ss_pred ----HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh-cCceEEechh
Q psy9807 213 ----LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ-KDVWLHVDAA 287 (561)
Q Consensus 213 ----~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~-~~~~lhVDaA 287 (561)
...|.+++.+| .+|+++|++++++ .+.+|+++..++.+|.+.|+++|+++|++ ||+++++|+|
T Consensus 55 ~~~~~~~g~~~~~~~----~~d~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a 122 (331)
T 1pff_A 55 EHQLRKFGVEVDFID----MAVPGNIEKHLKP--------NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNT 122 (331)
T ss_dssp HTHHHHTTCEEEEEC----TTSTTHHHHTCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECT
T ss_pred HHHHHhcCCEEEEeC----CCCHHHHHHhhcC--------CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECC
Confidence 34678888888 3689999998876 57788889999999999999999999999 9999999999
Q ss_pred cccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccC
Q psy9807 288 YAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPL 365 (561)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (561)
|+.+....+. . ..+|.++.++||+++.|.+ +|+++.++.............|.
T Consensus 123 ~~~~~~~~~~----~---~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~------------------ 177 (331)
T 1pff_A 123 FASPILTNPL----D---LGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDIT------------------ 177 (331)
T ss_dssp TTHHHHCCGG----G---GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCC------------------
T ss_pred CcccccCChh----h---cCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhc------------------
Confidence 9865443221 1 1359999999999999987 67887765344332211111100
Q ss_pred cCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 366 GRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD 408 (561)
Q Consensus 366 sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 408 (561)
+.....+..|..++.+ +.+..+.++..++++.+.+.+++.+
T Consensus 178 ~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (331)
T 1pff_A 178 GAIISPHDAWLITRGT--LTLDMRVKRAAENAQKVAEFLHEHK 218 (331)
T ss_dssp CCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCCHHHHHHHHcCc--chHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0011223334333322 2344455666667777777777654
No 140
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.75 E-value=6.8e-16 Score=159.15 Aligned_cols=308 Identities=11% Similarity=0.009 Sum_probs=189.0
Q ss_pred HHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q psy9807 107 ADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEA 186 (561)
Q Consensus 107 ~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~ 186 (561)
.+.+...+.. ...|. .+...++++ .+++++|.+++ ..+||+|||+++..++.+. .
T Consensus 43 ~~a~~~~~~~-~~~y~-~~~~~~l~~----~la~~~~~~~~---------~v~~~~g~~~al~~~~~~~--~-------- 97 (364)
T 1lc5_A 43 KRALIDNLDC-IERYP-DADYFHLHQ----ALARHHQVPAS---------WILAGNGETESIFTVASGL--K-------- 97 (364)
T ss_dssp HHHHHHTGGG-GGSCC-CTTCHHHHH----HHHHHHTSCGG---------GEEEESSHHHHHHHHHHHH--C--------
T ss_pred HHHHHHHHHH-hhcCC-CCCHHHHHH----HHHHHHCcCHH---------HEEECCCHHHHHHHHHHHc--C--------
Confidence 3444444432 22232 233444555 45666677654 5799999999988777654 1
Q ss_pred CCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CCCccC-hhhHHHHHhhhchhhcCCceEEEEEecCCCCCc
Q psy9807 187 HPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EFLACS-GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC 263 (561)
Q Consensus 187 ~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d-~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG 263 (561)
++++++.... .++..+++..|.+++.+|. ....++ ++++.+.+.+ .+.+|+++...+.||
T Consensus 98 ---------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~--------~~~~v~i~~p~nptG 160 (364)
T 1lc5_A 98 ---------PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTP--------DLDCLFLCTPNNPTG 160 (364)
T ss_dssp ---------CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCT--------TCCEEEEESSCTTTC
T ss_pred ---------CCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhccC--------CCCEEEEeCCCCCCC
Confidence 1245555444 6777778888999999998 323344 3544444422 355677777788899
Q ss_pred cccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHh
Q psy9807 264 AFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNA 339 (561)
Q Consensus 264 ~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~ 339 (561)
.+-| +++|+++|++||+++++|++|+.+..-........ +....|.+..++||+++.| ..+|++++.++......
T Consensus 161 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l 239 (364)
T 1lc5_A 161 LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL-KDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARM 239 (364)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGC-TTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHh-ccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHH
Confidence 9988 99999999999999999999986432111111111 1123478899999999855 34688873455443322
Q ss_pred hccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccc
Q psy9807 340 FNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLM 418 (561)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~ 418 (561)
......| ....+..+++...+. .+.+++..++..++.+++.+.|++.|++++. ++..
T Consensus 240 ~~~~~~~---------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~g 297 (364)
T 1lc5_A 240 RRQQMPW---------------------SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRA 297 (364)
T ss_dssp HHHSCTT---------------------CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSS
T ss_pred HHhCCCC---------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC-CCCC
Confidence 1111111 112334444444443 3467788888889999999999998898875 3344
Q ss_pred cceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHH
Q psy9807 419 GLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEI 498 (561)
Q Consensus 419 ~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~ 498 (561)
+.+.+++. . +
T Consensus 298 ~~~~~~~~-------------------------------------------------------------------~-~-- 307 (364)
T 1lc5_A 298 NYLLLRCE-------------------------------------------------------------------R-E-- 307 (364)
T ss_dssp SEEEEEES-------------------------------------------------------------------C-T--
T ss_pred eEEEEECC-------------------------------------------------------------------C-c--
Confidence 44333221 1 0
Q ss_pred HHHHHHHHHhCCcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 499 NEKLLKRINGNGKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 499 ~~~l~~~L~~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
..++.+.|.+.|.....+... .+..++|+++. +++|+++++++|+++.+++
T Consensus 308 ~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 308 DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR----SAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp TCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC----CHHHHHHHHHHHHHHhhcc
Confidence 225677788876544333222 12468999954 5778999999998876553
No 141
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.75 E-value=1.9e-16 Score=165.13 Aligned_cols=213 Identities=13% Similarity=0.084 Sum_probs=144.5
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE 209 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ 209 (561)
..++.+++++++|.+ ..++++|||+|+..++.+... + ++++++.... .+..
T Consensus 61 ~~~l~~~la~~~g~~-----------~~i~~~sG~~ai~~~~~~~~~----------~-------gd~vl~~~~~y~~~~ 112 (389)
T 3acz_A 61 VEQFEEMVCSIEGAA-----------GSAAFGSGMGAISSSTLAFLQ----------K-------GDHLIAGDTLYGCTV 112 (389)
T ss_dssp HHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHTTTCC----------T-------TCEEEEESSCCHHHH
T ss_pred HHHHHHHHHHHhCCC-----------eEEEeCCHHHHHHHHHHHHhC----------C-------CCEEEEeCCCchHHH
Confidence 344445667777875 358888899998777654311 0 2244444444 3344
Q ss_pred HH----HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEec
Q psy9807 210 VV----MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 210 ka----a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVD 285 (561)
.. +...|.+++.+|. .|+++|+++|++ .+.+|+++..++.+|.+.|+++|+++|++||++++||
T Consensus 113 ~~~~~~~~~~g~~~~~v~~----~d~~~l~~~i~~--------~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD 180 (389)
T 3acz_A 113 SLFTHWLPRFGIEVDLIDT----SDVEKVKAAWKP--------NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVD 180 (389)
T ss_dssp HHHHHHHHHTTCEEEEECT----TCHHHHHHTCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHcCCEEEEECC----CCHHHHHHhcCC--------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE
Confidence 43 4567888888883 589999998876 5678888999999999999999999999999999999
Q ss_pred hhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccc
Q psy9807 286 AAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQI 363 (561)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (561)
++|+.+....| . . ..+|+++.++||+++.|.+ +|+++.++...+....... .+. +
T Consensus 181 ~~~~~~~~~~~-~----~--~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~-~~~-----g---------- 237 (389)
T 3acz_A 181 ATFTSPCFLKP-L----E--LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYR-KDA-----G---------- 237 (389)
T ss_dssp CTTTCTTTCCG-G----G--TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHH-HHH-----C----------
T ss_pred CCCccccccCc-c----c--cCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHH-Hhc-----C----------
Confidence 99986543222 1 1 1469999999999999988 6888887633332211100 000 0
Q ss_pred cCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 364 PLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 364 ~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
-....+..|..++.+ +.+..++++..++++.+.+.+++.+.+.
T Consensus 238 ---~~~~~~~~~~~~~~l--~~l~~r~~~~~~~~~~l~~~l~~~~~v~ 280 (389)
T 3acz_A 238 ---SLMAPMDAFLCARGM--KTLPIRMQIHMENGLKVAKFLEQHEKIV 280 (389)
T ss_dssp ---CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred ---CCCCHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 001234455555444 3355667788888999999999887554
No 142
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.74 E-value=6.2e-17 Score=172.01 Aligned_cols=273 Identities=10% Similarity=0.020 Sum_probs=173.5
Q ss_pred HHHHHHHHhhccc-cccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q psy9807 104 AIVADILSDSIAC-IGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQR 182 (561)
Q Consensus 104 ~~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~ 182 (561)
..+.+.+...++. ....|.......++.+.+.+|+.+.+|.+.+ ....++|+|||+|+..++.+..+.
T Consensus 73 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-------~~~v~~t~G~~~al~~~~~~l~~~---- 141 (447)
T 3b46_A 73 QFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELK-------AENVTVTTGANEGILSCLMGLLNA---- 141 (447)
T ss_dssp HHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCC-------GGGEEEESHHHHHHHHHHHHHCCT----
T ss_pred HHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-------hhhEEEeCCHHHHHHHHHHHHcCC----
Confidence 3444555555543 2233444444678999999999998886421 025799999999998887664211
Q ss_pred HHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C------------CCccChhhHHHHHhhhchhhcCC
Q psy9807 183 VKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E------------FLACSGGKGGGVIQRKSDREMCS 248 (561)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~------------~g~~d~~~Le~~i~~~~~~~~g~ 248 (561)
++++++.... .+...++...|.+++.+|. . ++.+|+++|+++|.+
T Consensus 142 -------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------- 200 (447)
T 3b46_A 142 -------------GDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITS-------- 200 (447)
T ss_dssp -------------TCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCT--------
T ss_pred -------------CCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhcc--------
Confidence 2345555544 6677777888999999987 3 468999999998865
Q ss_pred ceEEEEEecCCCCCccc---cCHHHHHHHHhhcCceEEechhcccccccCc--cccccccCccccceeeecCCcccccc-
Q psy9807 249 DLLQVVATLGTTNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICP--ENRYLMKGVELADSFNFNPHKWMLVT- 322 (561)
Q Consensus 249 ~p~~vv~t~gtt~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~--~~~~~~~gi~~aDsi~~~~HK~l~~P- 322 (561)
.+.+|+++...+.||.+ +++++|+++|++||+++++|++|+......+ .......+....|.+..++||+++.|
T Consensus 201 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G 280 (447)
T 3b46_A 201 KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATG 280 (447)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTT
T ss_pred CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcc
Confidence 56778888888889998 5799999999999999999999986432211 11111011224589999999999744
Q ss_pred ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHH
Q psy9807 323 FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFE 401 (561)
Q Consensus 323 ~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~ 401 (561)
.-+|.++.+++..+...... ..+.. + ..-......+..+++... ...++++.++..++.+++.
T Consensus 281 ~riG~~~~~~~~l~~~l~~~-~~~~~------------~---~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~ 344 (447)
T 3b46_A 281 WRIGWVLSLNAELLSYAAKA-HTRIC------------F---ASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFT 344 (447)
T ss_dssp SCCEEEECSCHHHHHHHHHH-HHHHT------------S---SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred hhhEEEEeCCHHHHHHHHHH-Hhhcc------------C---CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHH
Confidence 23788887454433321110 00000 0 000011112222333222 3346778888889999999
Q ss_pred HHHhcCCCeEEeccccccceeeec
Q psy9807 402 QLVRSDDRFEVIYEVLMGLVCFRL 425 (561)
Q Consensus 402 ~~l~~~~g~~l~~~~~~~~v~f~~ 425 (561)
+.|++. |+++..+.....+.+++
T Consensus 345 ~~L~~~-g~~~~~~~~g~~~~~~~ 367 (447)
T 3b46_A 345 SIFDEL-GLPYTAPEGTYFVLVDF 367 (447)
T ss_dssp HHHHHH-TCCEECCSBSSEEEEEC
T ss_pred HHHHHC-CCeecCCCeeEEEEEec
Confidence 999987 78776544444444444
No 143
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.74 E-value=1.2e-15 Score=162.40 Aligned_cols=249 Identities=13% Similarity=0.089 Sum_probs=146.2
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|..++...++++.+ ++++|.+ ..++|+|||+|+..++.++.. + + ++
T Consensus 70 ~y~~~~~~~~l~~~l----a~~~~~~-----------~~~~~~~gt~a~~~al~~l~~----------~-------g-di 116 (456)
T 2ez2_A 70 AYAGSENFYHLERTV----QELFGFK-----------HIVPTHQGRGAENLLSQLAIK----------P-------G-QY 116 (456)
T ss_dssp CSSSCHHHHHHHHHH----HHHHCCS-----------EEEEESSHHHHHHHHHHHHCC----------T-------T-CE
T ss_pred hcccChhHHHHHHHH----HHHhCCC-----------cEEEeCCcHHHHHHHHHHhCC----------C-------C-CE
Confidence 455566666676655 5555654 469999999999888766421 1 1 22
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-C----------CCccChhhHHHHHhhhchhhcCCceEEEEEecCCC-CCcccc
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-E----------FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT-NCCAFD 266 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~----------~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt-~tG~id 266 (561)
+...+. .+...++...|.+++.+++ . ++.+|+++|+++|.+ ... ..+.+|+.+...+ .+|.+-
T Consensus 117 ~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~--~t~--~~~~~v~l~~p~n~ptG~~~ 192 (456)
T 2ez2_A 117 VAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDE--KGA--ENIAYICLAVTVNLAGGQPV 192 (456)
T ss_dssp EEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHH--HCG--GGEEEEEEESSBTTTTSBCC
T ss_pred eccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHh--ccc--cceeEEEEeccCCCCCCccC
Confidence 222222 3446677788899888887 3 368999999999976 321 1345666664554 788876
Q ss_pred C---HHHHHHHHhhcCceEEechhcccc---------cccCccc-cccccC-ccccceeeecCCccccccccceeEEecC
Q psy9807 267 C---LEEIGQVCRQKDVWLHVDAAYAGS---------AFICPEN-RYLMKG-VELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 267 p---l~eI~~ia~~~~~~lhVDaA~gg~---------~~~~~~~-~~~~~g-i~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
| +++|+++|++||+++++|++|+.+ ..+.... ...... -..+|.+++++||+++.| ..|+++.++
T Consensus 193 ~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~ 271 (456)
T 2ez2_A 193 SMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVN-IGGFLCMND 271 (456)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCS-SCEEEEESC
T ss_pred CHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCC-ceeEEEECC
Confidence 6 999999999999999999999863 1121110 000000 023588888999998755 457766656
Q ss_pred hhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 333 PSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYL-QEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~-~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
+............+. . ...+ .+.....+.. +++... +.+ ++.+++..++++++.+.|++. +++
T Consensus 272 ~~~~~~~~~~~~~~~-~-----~~~~------~~~~~~~~~a-~a~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 335 (456)
T 2ez2_A 272 DEMFSSAKELVVVYE-G-----MPSY------GGLAGRDMEA-MAIGLR--EAMQYEYIEHRVKQVRYLGDKLKAA-GVP 335 (456)
T ss_dssp HHHHHHHHHHHHHHT-C-----CTTT------TTCCHHHHHH-HHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHHHHHHHHhhcc-C-----cccc------cCcchhHHHH-HHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcC-CCc
Confidence 544332211110110 0 0000 0001111111 011111 233 466777788889999999885 777
Q ss_pred Eecccccccee
Q psy9807 412 VIYEVLMGLVC 422 (561)
Q Consensus 412 l~~~~~~~~v~ 422 (561)
+..+.....+.
T Consensus 336 ~~~p~~~~~~~ 346 (456)
T 2ez2_A 336 IVEPVGGHAVF 346 (456)
T ss_dssp BCSSCCSSEEE
T ss_pred cccCCCceEEE
Confidence 66554444433
No 144
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.74 E-value=1.2e-17 Score=184.64 Aligned_cols=237 Identities=13% Similarity=0.089 Sum_probs=153.4
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCCh-hHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTA-SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE 209 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~gg-T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ 209 (561)
.++.+.+++++|.+.. +|+++| |.||..++.+.... ++.+++.... .|+.
T Consensus 198 ~eaE~~lA~~fGa~~a-----------~~v~nGts~An~~ai~al~~p-----------------GD~VLv~r~~H~S~~ 249 (715)
T 3n75_A 198 KEAEQYIARVFNADRS-----------YMVTNGTSTANKIVGMYSAPA-----------------GSTILIDRNCHKSLT 249 (715)
T ss_dssp HHHHHHHHHHHTCSEE-----------EEESSHHHHHHHHHHHHHCCT-----------------TCEEEEESSCCHHHH
T ss_pred HHHHHHHHHHhCCCCc-----------eEECcHHHHHHHHHHHHhCCC-----------------CCEEEECCCccHHHH
Confidence 3444566889998753 555555 68888777653211 2344444444 8898
Q ss_pred HHHHhccCCeEEeeC--CCCc----c-----ChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc
Q psy9807 210 VVMLDWLGKMLDLPK--EFLA----C-----SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK 278 (561)
Q Consensus 210 kaa~~~g~~v~~v~~--~~g~----~-----d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~ 278 (561)
.++.+.|++++.++. +... + |+++|+++|++ ... ...|.+|+++.. |++|.+.|+++|+++|+++
T Consensus 250 ~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~--~~~-~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~ 325 (715)
T 3n75_A 250 HLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKE--TPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK 325 (715)
T ss_dssp HHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHH--STT-CCSCSEEEEESS-CTTSEEECHHHHHHHCCCS
T ss_pred HHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhh--CcC-ccCceEEEEECC-CCCCccCCHHHHHHHhCcC
Confidence 999999999998887 3222 3 89999999986 321 123557777777 8999999999999999877
Q ss_pred CceEEechhcccccccCcccccc--ccCcccccee---eecCCccccccccceeEEecChhhHHHhhccCCCccccCCCC
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYL--MKGVELADSF---NFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQG 353 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi---~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (561)
+ ++||+||+++..+.|..+.. +..-..+|.+ +.++||+|++|.++|++++++... ...+.....++...
T Consensus 326 ~--livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~-~~~~~~~~~~~~ST--- 399 (715)
T 3n75_A 326 S--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN-EETFNEAYMMHTTT--- 399 (715)
T ss_dssp E--EEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCC-HHHHHHHHHHTSCS---
T ss_pred c--EEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhh-HHHHHHHHHhhcCC---
Confidence 3 89999999876666654421 1111135876 999999999999999999976411 11111111111110
Q ss_pred CCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEecccc
Q psy9807 354 SAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR------FEVIYEVL 417 (561)
Q Consensus 354 ~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g------~~l~~~~~ 417 (561)
.+.+ ....++-.+++.+....-.+++++..+++++|++.|+++++ |+++.+..
T Consensus 400 -Spsy----------~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~ 458 (715)
T 3n75_A 400 -SPHY----------GIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDH 458 (715)
T ss_dssp -SCCH----------HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSC
T ss_pred -CchH----------HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCccc
Confidence 0110 11122223444444323355789999999999999998764 67776643
No 145
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.74 E-value=3e-16 Score=162.27 Aligned_cols=313 Identities=11% Similarity=-0.041 Sum_probs=193.1
Q ss_pred HHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCC--ccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q psy9807 105 IVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLP--KEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQR 182 (561)
Q Consensus 105 ~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~--~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~ 182 (561)
.+.+.+...+. ....|.......++.+++.+|+.+.+|.+ ++ ..+||+|||+++..++.+....
T Consensus 40 ~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~---------~i~~t~g~~~al~~~~~~~~~~---- 105 (376)
T 3ezs_A 40 FIQDALKNHTH-SLNIYPKSAFEESLRAAQRGFFKRRFKIELKEN---------ELISTLGSREVLFNFPSFVLFD---- 105 (376)
T ss_dssp HHHHHHHTTGG-GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGG---------GEEEESSSHHHHHHHHHHHTTT----
T ss_pred HHHHHHHHhhh-hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHH---------HEEECcCcHHHHHHHHHHHcCC----
Confidence 34444444442 22334333345789999999999999973 33 6799999999998777664210
Q ss_pred HHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 183 VKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
+.++.+++.... .++..++...|.+++.+|. .++.+++ +|++++.+ .+.+|+++...+
T Consensus 106 -----------~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~~--------~~~~v~~~~p~n 165 (376)
T 3ezs_A 106 -----------YQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKELQ--------EVDLVILNSPNN 165 (376)
T ss_dssp -----------CSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHHH--------HCSEEEECSSCT
T ss_pred -----------CCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhcc--------CCCEEEEcCCCC
Confidence 001245554444 6777788888999999998 5556666 77777765 455677777888
Q ss_pred CCccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccC-------ccccceeeecCCcccc-ccccceeEE
Q psy9807 261 NCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKG-------VELADSFNFNPHKWML-VTFDCSAMW 329 (561)
Q Consensus 261 ~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~g-------i~~aDsi~~~~HK~l~-~P~g~g~l~ 329 (561)
.+|.+-| +++|+++|++||+++++|++|+...... ........ ....+.+..++||+++ ....+|.++
T Consensus 166 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 244 (376)
T 3ezs_A 166 PTGRTLSLEELISWVKLALKHDFILINDECYSEIYENT-PPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIA 244 (376)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS-CCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEE
T ss_pred CcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC-CCCCHHHccccccccccCcEEEEecchhccCCccceeEEEe
Confidence 8999876 6777778999999999999998644322 11111110 1234688999999996 345577776
Q ss_pred ecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 330 LKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDD 408 (561)
Q Consensus 330 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~ 408 (561)
. ++..... +.....+. +-....+..+++...+. .+.+++..++..++.+++.+.|+
T Consensus 245 ~-~~~~~~~-~~~~~~~~------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~--- 301 (376)
T 3ezs_A 245 G-DSRLLEK-YKAFRAYL------------------GYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK--- 301 (376)
T ss_dssp E-CHHHHHH-HHHHHTTT------------------CCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST---
T ss_pred e-CHHHHHH-HHHHHhhh------------------cCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc---
Confidence 5 4433322 21100000 00012222333333332 33467777888888888888887
Q ss_pred CeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcce
Q psy9807 409 RFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 488 (561)
Q Consensus 409 g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v 488 (561)
++. .+.....+.+
T Consensus 302 ~~~--~~~~~~~~~~----------------------------------------------------------------- 314 (376)
T 3ezs_A 302 NTL--IYPYSFYVYL----------------------------------------------------------------- 314 (376)
T ss_dssp TCC--CCSBSSEEEE-----------------------------------------------------------------
T ss_pred CCC--CCCcceEEEE-----------------------------------------------------------------
Confidence 443 2222222222
Q ss_pred eeecCCCcHHHHHHHHHHHh-CCcEEEEeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 489 CFRLKGPNEINEKLLKRING-NGKIHLVPSKI----RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 489 ~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
.+. ...++.+.|.+ .|..+..+... .+..++|+++++ ++++++++++.|.++.+
T Consensus 315 --~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~---~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 315 --PVQ----NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY---DTPLLEKPLEIIETYRE 373 (376)
T ss_dssp --ECS----CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS---CHHHHHHHHHHHHHHHC
T ss_pred --ECC----CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC---CHHHHHHHHHHHHHHHH
Confidence 111 13467788877 67655443222 245689999763 78899999999988754
No 146
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.74 E-value=9.5e-17 Score=169.32 Aligned_cols=232 Identities=11% Similarity=0.018 Sum_probs=151.4
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|...++|+ ++++++|.+. .+++++|++|+..++.+.... ++.+++
T Consensus 79 ~~~p~~~~le~----~lA~l~g~~~-----------~v~~~sG~~Ai~~al~al~~~-----------------Gd~Vi~ 126 (430)
T 3ri6_A 79 SSNPTVEDLEQ----RLKNLTGALG-----------VLALGSGMAAISTAILTLARA-----------------GDSVVT 126 (430)
T ss_dssp -CCHHHHHHHH----HHHHHHTCSE-----------EEEESCHHHHHHHHHHHHCCT-----------------TCEEEE
T ss_pred CCCHHHHHHHH----HHHHHHCCCc-----------EEEECCHHHHHHHHHHHHhCC-----------------CCEEEE
Confidence 34566666666 5577777753 588889999988777654110 224444
Q ss_pred eccc-chHHH----HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 202 SPAC-TELEV----VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 202 ~~s~-~s~~k----aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
.... .+... .+...|.+++.++.+ |+++|+++|++ .+.+|+++..++.+|.+.|+++|+++|+
T Consensus 127 ~~~~y~~~~~~~~~~~~~~G~~~~~v~~~----d~~~l~~ai~~--------~t~~v~~e~p~NptG~~~dl~~i~~la~ 194 (430)
T 3ri6_A 127 TDRLFGHTLSLFQKTLPSFGIEVRFVDVM----DSLAVEHACDE--------TTKLLFLETISNPQLQVADLEALSKVVH 194 (430)
T ss_dssp ETTCCHHHHHHHHTHHHHTTCEEEEECTT----CHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred cCCCchhHHHHHHHHHHHcCCEEEEeCCC----CHHHHHHhhCC--------CCeEEEEECCCCCCCeecCHHHHHHHHH
Confidence 4333 33333 556678889888844 89999999976 5788899999999999999999999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCcccccc--ccceeEEecChhhHH---------HhhccCCC
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT--FDCSAMWLKDPSWVV---------NAFNVDPL 345 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P--~g~g~l~~r~~~~l~---------~~~~~~~~ 345 (561)
+||++++||++|+.+....+. .. .+|+++.++||++++| ...|++..+...... +.+. ...
T Consensus 195 ~~g~~livD~a~~~~~~~~~~----~~---g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g-~~~ 266 (430)
T 3ri6_A 195 AKGIPLVVDTTMTPPYLLEAK----RL---GVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAG-PMA 266 (430)
T ss_dssp TTTCCEEEECTTSCTTTCCGG----GG---TCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHG-GGH
T ss_pred HcCCEEEEECCCcccccCChH----Hc---CCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhc-hhh
Confidence 999999999999865443221 12 3599999999999976 245555543321110 0000 000
Q ss_pred ccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 346 YLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
|+.... ..+....+.....+..|..++ +.+.+..++++..++++++.+.|++.|+++-+.
T Consensus 267 ~i~~~~-------~~~~~~~g~~~~~~~a~l~l~--~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~ 326 (430)
T 3ri6_A 267 FLYKAR-------KEVFQNLGPSLSPHNAYLQSL--GLETMALRIERSCQNAQELAHWLLSIPQVKCVN 326 (430)
T ss_dssp HHHHHH-------HTHHHHHCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHH-------HHHHHhcCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEE
Confidence 000000 000000111234455565544 566778888999999999999999999887544
No 147
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.74 E-value=5.4e-16 Score=159.60 Aligned_cols=228 Identities=9% Similarity=-0.005 Sum_probs=145.9
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-cceEEeccc-chHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII-ANLIASPAC-TELEV 210 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~-~~~vv~~s~-~s~~k 210 (561)
++.+.+++.+|.+++ ..++|+|||+++..++.+... + + +++++.... .+...
T Consensus 62 ~lr~~la~~~~~~~~---------~v~~~~G~~~ai~~~~~~~~~----------~-------g~d~Vl~~~p~~~~~~~ 115 (356)
T 1fg7_A 62 AVIENYAQYAGVKPE---------QVLVSRGADEGIELLIRAFCE----------P-------GKDAILYCPPTYGMYSV 115 (356)
T ss_dssp HHHHHHHHHHTSCGG---------GEEEESHHHHHHHHHHHHHCC----------T-------TTCEEEECSSSCTHHHH
T ss_pred HHHHHHHHHhCCChH---------HEEEcCCHHHHHHHHHHHHhC----------C-------CCCEEEEeCCChHHHHH
Confidence 344455666687654 578999999998777665321 0 2 245555444 66677
Q ss_pred HHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHH---HHHHhhcCceEEech
Q psy9807 211 VMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEI---GQVCRQKDVWLHVDA 286 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI---~~ia~~~~~~lhVDa 286 (561)
+++..|.+++.+|. +++.+|+++|++++. .+.+|+++..++.||.+-|.++| +++|+ ||+++++|+
T Consensus 116 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De 185 (356)
T 1fg7_A 116 SAETIGVECRTVPTLDNWQLDLQGISDKLD---------GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADE 185 (356)
T ss_dssp HHHHHTCEEEECCCCTTSCCCHHHHHTSCT---------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEEC
T ss_pred HHHHcCCEEEEeeCCCCCCCCHHHHHHHhc---------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEc
Confidence 77788999999998 777899999987763 25567777888889999776555 45566 999999999
Q ss_pred hcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccC
Q psy9807 287 AYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPL 365 (561)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (561)
+|+.... .......... ...+.+..++||+++.|. .+|+++. +++.+.........|
T Consensus 186 ~~~~~~~-~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~------------------- 243 (356)
T 1fg7_A 186 AYIEFCP-QASLAGWLAE-YPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLLMKVIAPY------------------- 243 (356)
T ss_dssp TTGGGSG-GGCSGGGTTT-CTTEEEEEESSSTTCCGGGCCEEEEE-CHHHHHHHHHHSCSS-------------------
T ss_pred cchhhcC-CCcHHHHHhh-CCCEEEEecchHhhcCchhhhEEEEe-CHHHHHHHHHhcCCC-------------------
Confidence 9986431 1111111111 123678889999997442 3788887 444333222211111
Q ss_pred cCCcchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Q psy9807 366 GRRFRSLKLWFVLRLLGVKY---LQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 420 (561)
Q Consensus 366 sr~~~al~lw~~l~~~g~~g---~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~ 420 (561)
....+..+++...+...+ ++++.++..++.+++.+.|++++++....+...+.
T Consensus 244 --~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 299 (356)
T 1fg7_A 244 --PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNY 299 (356)
T ss_dssp --CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSE
T ss_pred --CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeE
Confidence 122344455555555444 67888888899999999999886643333433333
No 148
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.74 E-value=1.6e-16 Score=167.45 Aligned_cols=236 Identities=14% Similarity=0.102 Sum_probs=149.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+ .+++++|.+. .+++++||+||..++.+... + ++++++.
T Consensus 56 ~~~~~~~l~~----~la~~~g~~~-----------~v~~~sGt~A~~~~l~~~~~----------~-------gd~vi~~ 103 (421)
T 2ctz_A 56 MNPTVDVLEK----RLAALEGGKA-----------ALATASGHAAQFLALTTLAQ----------A-------GDNIVST 103 (421)
T ss_dssp BCHHHHHHHH----HHHHHHTCSE-----------EEEESSHHHHHHHHHHHHCC----------T-------TCEEEEC
T ss_pred CChHHHHHHH----HHHHHhCCCc-----------eEEecCHHHHHHHHHHHHhC----------C-------CCEEEEe
Confidence 4454455555 5577777652 47888889999888765411 0 1234444
Q ss_pred ccc-chHHHHH----HhccCCeEEe-eCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHh
Q psy9807 203 PAC-TELEVVM----LDWLGKMLDL-PKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCR 276 (561)
Q Consensus 203 ~s~-~s~~kaa----~~~g~~v~~v-~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~ 276 (561)
... .+...++ ...|.+++.+ +.. |+++|+++|++ .+.+|+++..++.+|.+.|+++|+++|+
T Consensus 104 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----d~~~l~~~i~~--------~~~~v~~~~~~n~~G~~~~l~~i~~~a~ 171 (421)
T 2ctz_A 104 PNLYGGTFNQFKVTLKRLGIEVRFTSREE----RPEEFLALTDE--------KTRAWWVESIGNPALNIPDLEALAQAAR 171 (421)
T ss_dssp SCCCHHHHHHHHTHHHHTTCEEEECCTTC----CHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHcCCEEEEECCCC----CHHHHHHhhcc--------CCeEEEEECCCCCCCcccCHHHHHHHHH
Confidence 433 4444443 5578888888 633 79999999876 5778889999999999999999999999
Q ss_pred hcCceEEechhc-ccccccCccccccccCccccceeeecCCcccccccc-ceeEEecC--hhh----HHHhhccCCCccc
Q psy9807 277 QKDVWLHVDAAY-AGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD-CSAMWLKD--PSW----VVNAFNVDPLYLK 348 (561)
Q Consensus 277 ~~~~~lhVDaA~-gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g-~g~l~~r~--~~~----l~~~~~~~~~yl~ 348 (561)
+||+++++|++| +.+.. .. .. + ..+|+++.++||+++.|.+ .|.+++++ ... +.........|..
T Consensus 172 ~~g~~livD~~~~~~g~~-~~---~~--~-~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g 244 (421)
T 2ctz_A 172 EKGVALIVDNTFGMGGYL-LR---PL--A-WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHG 244 (421)
T ss_dssp HHTCEEEEECGGGGGGTS-CC---GG--G-GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTT
T ss_pred HcCCEEEEECCccccccc-CC---cc--c-cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhh
Confidence 999999999999 64421 11 11 1 1369999999999998874 67777752 111 1111111111100
Q ss_pred cCCCCCCCCCCcc----------cccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 349 HDQQGSAPDYRHW----------QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 349 ~~~~~~~~~~~~~----------~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
... ..++... ....+.....+..|+.++ +.+.+..++++..++++++.+.|+++|+++.+.
T Consensus 245 ~~~---~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~ 315 (421)
T 2ctz_A 245 LRL---TEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLL--GMETLSLRAERHVENTLHLAHWLLEQPQVAWVN 315 (421)
T ss_dssp BCH---HHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred hhh---hhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHc--CcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEE
Confidence 000 0000000 000112334455565544 334456677888899999999999999998764
No 149
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.73 E-value=1.4e-16 Score=169.26 Aligned_cols=235 Identities=10% Similarity=-0.084 Sum_probs=144.6
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..+....+|+..++++++++|.+.. -++++|||+||..++.++++. ++.+++.
T Consensus 85 g~~~~~~~e~~a~~~la~~~g~~~~----------~v~~~sGs~a~~~a~~~~~~~-----------------Gd~Vl~~ 137 (447)
T 3h7f_A 85 GCEHVDVVENLARDRAKALFGAEFA----------NVQPHSGAQANAAVLHALMSP-----------------GERLLGL 137 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCCT-----------------TCEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCce----------EEEeCCHHHHHHHHHHHhcCC-----------------CCEEEec
Confidence 3444456666666999999998753 244889999998887764321 2234443
Q ss_pred ccc-ch-HHHH--HHhcc--CCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHH
Q psy9807 203 PAC-TE-LEVV--MLDWL--GKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQV 274 (561)
Q Consensus 203 ~s~-~s-~~ka--a~~~g--~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~i 274 (561)
... .+ +..+ ....| ..++.++. +++.+|+++|++++++ . +|.+|+++...+.++ .|+++|+++
T Consensus 138 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~--~-----~~~~i~~~~~~~~~~--~~l~~i~~l 208 (447)
T 3h7f_A 138 DLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALE--F-----RPKVIIAGWSAYPRV--LDFAAFRSI 208 (447)
T ss_dssp CGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHH--H-----CCSEEEEECSSCCSC--CCHHHHHHH
T ss_pred CcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHh--c-----CCeEEEEcCCCCCCc--cCHHHHHHH
Confidence 322 22 1111 11222 34445555 5678999999999965 2 344566544444444 499999999
Q ss_pred HhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 275 CRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 275 a~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
|++||+++++|++|+.+.......... ++.+|+++.++||++++|.+ |+++.++ ...........++..
T Consensus 209 ~~~~g~lli~Dea~~~g~~~~g~~~~~---~~~~di~~~s~sK~l~G~~g-G~i~~~~-~~~~~l~~~~~~~~~------ 277 (447)
T 3h7f_A 209 ADEVGAKLLVDMAHFAGLVAAGLHPSP---VPHADVVSTTVHKTLGGGRS-GLIVGKQ-QYAKAINSAVFPGQQ------ 277 (447)
T ss_dssp HHHHTCEEEEECTTTHHHHHTTSSCCS---TTTCSEEEEESSGGGCCCSC-EEEEECG-GGHHHHHHHHTTTTC------
T ss_pred HHHcCCEEEEECCchhhhhcCCCCCCC---CCCCcEEEecCCcCCCCCCe-EEEEECH-HHHHHHhhhcCCccc------
Confidence 999999999999986544332221111 23469999999999988876 7776644 222211111111100
Q ss_pred CCCCCcccccCcCC-cchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEec
Q psy9807 355 APDYRHWQIPLGRR-FRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD----DRFEVIY 414 (561)
Q Consensus 355 ~~~~~~~~~~~sr~-~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~g~~l~~ 414 (561)
.+.. .....+..++......+++++.++..++++++.+.|++. +|++++.
T Consensus 278 ----------~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~ 332 (447)
T 3h7f_A 278 ----------GGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVS 332 (447)
T ss_dssp ----------SSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGG
T ss_pred ----------CCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEec
Confidence 0000 112333444444445577889999999999999999876 5788765
No 150
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.73 E-value=1.8e-15 Score=153.86 Aligned_cols=277 Identities=10% Similarity=0.008 Sum_probs=179.4
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHH
Q psy9807 132 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEV 210 (561)
Q Consensus 132 ~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~k 210 (561)
.++.+.+++++|.+++ ..++|+|+|+++..++.+. + ++++++.... .++..
T Consensus 54 ~~lr~~la~~~~~~~~---------~i~~t~G~~~~l~~~~~~~-----~--------------gd~vl~~~p~~~~~~~ 105 (337)
T 3p1t_A 54 PRVMRKLAEHFSCPED---------NLMLVRGIDECFDRISAEF-----S--------------SMRFVTAWPGFDGYRA 105 (337)
T ss_dssp HHHHHHHHHHHTSCGG---------GEEEESHHHHHHHHHHHHS-----T--------------TSEEEEESSSCSHHHH
T ss_pred HHHHHHHHHHhCcCHH---------HEEEeCCHHHHHHHHHHhc-----C--------------CCeEEEeCCCcHHHHH
Confidence 3455566777788764 5789999998876665542 0 1245554444 67777
Q ss_pred HHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 211 VMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 211 aa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
++...|.+++.+|. +++.+|+++|+++. .+.+|+.+...+.||.+.|++++.++|+++++ +++|.+|+
T Consensus 106 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~~----------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~ 174 (337)
T 3p1t_A 106 RIAVSGLRHFEIGLTDDLLLDPNDLAQVS----------RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYV 174 (337)
T ss_dssp HHTTSCCEEEEECBCTTSSBCHHHHTTCC----------TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTG
T ss_pred HHHHcCCEEEEecCCCCCCCCHHHHHhhc----------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCCh
Confidence 78888999999998 77899999988752 24578888889999999999999999999997 56699998
Q ss_pred cccccCccccccccCccccceeeecCCcccc-ccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCC
Q psy9807 290 GSAFICPENRYLMKGVELADSFNFNPHKWML-VTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRR 368 (561)
Q Consensus 290 g~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~-~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~ 368 (561)
......+. .......+.+..++||+++ ....+|+++. +...+.. +.....+ . .
T Consensus 175 ~~~~~~~~----~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~-l~~~~~~------------------~--~ 228 (337)
T 3p1t_A 175 DYSSFRAR----GLAYGENELVFRSFSKSYGLAGLRLGALFG-PSELIAA-MKRKQWF------------------C--N 228 (337)
T ss_dssp GGSSCSSS----CCCCBTTEEEEEESSSTTCCTTTCCEEEEC-CHHHHHH-HHTTSCT------------------T--C
T ss_pred hhcccccc----ccccCCCEEEEeeCchhccCcchheEEEEe-CHHHHHH-HHhhcCC------------------C--C
Confidence 53221110 1122234788999999997 3455677766 4433332 2111000 0 0
Q ss_pred cchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHH
Q psy9807 369 FRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRL 447 (561)
Q Consensus 369 ~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~ 447 (561)
...+...+....+. ...+.+.+++..++.+++.+.|++. ++++.. +..+.+.|.
T Consensus 229 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~----------------------- 283 (337)
T 3p1t_A 229 VGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVAS-SEANFVLVE----------------------- 283 (337)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCC-CSSSEEEEE-----------------------
T ss_pred CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEECC-CCCeEEEEE-----------------------
Confidence 11222222333332 3356777788888889999999987 776643 333443332
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEE
Q psy9807 448 LGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRM 527 (561)
Q Consensus 448 ~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~ 527 (561)
... ...+.+.|.+.|.....+.......++|+
T Consensus 284 --------------------------------------------~~~----~~~~~~~l~~~gi~v~~g~~~~~~~~iRi 315 (337)
T 3p1t_A 284 --------------------------------------------NAA----GERTLRFLRERGIQVKDAGQFGLHHHIRI 315 (337)
T ss_dssp --------------------------------------------CTT----THHHHHHHHHTTEECEEGGGGTCCSEEEE
T ss_pred --------------------------------------------cCC----HHHHHHHHHHCCeEEEECccCCCCCeEEE
Confidence 111 12466777777755444333333468999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHH
Q psy9807 528 AVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 528 ~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
+++ +++|+++++++|+++.
T Consensus 316 s~~----~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 316 SIG----REEDNDRLLAALAEYS 334 (337)
T ss_dssp ECC----CHHHHHHHHHHHHHHT
T ss_pred ecC----CHHHHHHHHHHHHHHh
Confidence 965 5789999999998764
No 151
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.73 E-value=3.4e-16 Score=163.91 Aligned_cols=269 Identities=10% Similarity=-0.020 Sum_probs=168.3
Q ss_pred HHHHHHhhcccc-ccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q psy9807 106 VADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 184 (561)
Q Consensus 106 ~~~~l~~~~n~~-~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~ 184 (561)
+.+.+...+... ...|.......++++.+.+|+.+.+|.+-. .....++|+|||+++..++.+....
T Consensus 41 v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~------~~~~i~~~~g~~~a~~~~~~~~~~~------ 108 (410)
T 3e2y_A 41 VKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQID------PNEEILVAVGAYGSLFNSIQGLVDP------ 108 (410)
T ss_dssp HHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCC------TTTSEEEESHHHHHHHHHHHHHCCT------
T ss_pred HHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCC------CCCCEEEeCCcHHHHHHHHHHhcCC------
Confidence 334444444322 223433334578999999999998887532 0026899999999998877654210
Q ss_pred hcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-C-----------CCccChhhHHHHHhhhchhhcCCceE
Q psy9807 185 EAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-E-----------FLACSGGKGGGVIQRKSDREMCSDLL 251 (561)
Q Consensus 185 ~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~-----------~g~~d~~~Le~~i~~~~~~~~g~~p~ 251 (561)
++.+++.... .+....+...|.+++.+|. . ++.+|+++|++++.+ .+.
T Consensus 109 -----------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~--------~~~ 169 (410)
T 3e2y_A 109 -----------GDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS--------KTK 169 (410)
T ss_dssp -----------TCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT--------TEE
T ss_pred -----------CCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCC--------Cce
Confidence 2245554444 6677777888888888886 2 346899999998866 577
Q ss_pred EEEEecCCCCCccc---cCHHHHHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCcccccc-ccc
Q psy9807 252 QVVATLGTTNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVT-FDC 325 (561)
Q Consensus 252 ~vv~t~gtt~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P-~g~ 325 (561)
+|+++...+.+|.+ +++++|+++|++||+++++|.+|+............ +.+....+.+..+++|+++.| ..+
T Consensus 170 ~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~ 249 (410)
T 3e2y_A 170 AIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKL 249 (410)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCC
T ss_pred EEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceE
Confidence 78888888999999 689999999999999999999998543321111111 111112347788999999733 557
Q ss_pred eeEEecChhhHHHhhcc--CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHH------hhHHHHHHHHHHHHHHH
Q psy9807 326 SAMWLKDPSWVVNAFNV--DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRL------LGVKYLQEYIRKQISLA 397 (561)
Q Consensus 326 g~l~~r~~~~l~~~~~~--~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~------~g~~g~~~~~~~~~~la 397 (561)
|+++.++ ..+...... ...| ..-.+....+..+++. .....++++.++..++.
T Consensus 250 G~~~~~~-~~~~~~~~~~~~~~~------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (410)
T 3e2y_A 250 GWSIGPA-HLIKHLQTVQQNSFY------------------TCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKR 310 (410)
T ss_dssp EEEECCH-HHHHHHHHHHHTTTC------------------CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred EEEEECH-HHHHHHHHHHHhhcc------------------CCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHH
Confidence 7777643 333221110 0000 0001111122222221 12446778888889999
Q ss_pred HHHHHHHhcCCCeEEeccccccceeeec
Q psy9807 398 KEFEQLVRSDDRFEVIYEVLMGLVCFRL 425 (561)
Q Consensus 398 ~~l~~~l~~~~g~~l~~~~~~~~v~f~~ 425 (561)
+++.+.|++. ++++..+.....+.+++
T Consensus 311 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 337 (410)
T 3e2y_A 311 DRMVRLLNSV-GLKPIVPDGGYFIIADV 337 (410)
T ss_dssp HHHHHHHHTT-TCEEEBCSBSSEEEEEC
T ss_pred HHHHHHHHHC-CCeecCCCccEEEEEEc
Confidence 9999999988 88876655444444433
No 152
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.73 E-value=2.4e-16 Score=165.54 Aligned_cols=218 Identities=10% Similarity=-0.002 Sum_probs=145.4
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
....|...++|+.+ ++++|.+ ..++++|||+||..++.+... + ++.++
T Consensus 78 r~~~p~~~~le~~l----A~l~g~~-----------~~i~~ssGt~Ai~~al~~l~~----------~-------Gd~Vi 125 (415)
T 2fq6_A 78 RRGTLTHFSLQQAM----CELEGGA-----------GCVLFPCGAAAVANSILAFIE----------Q-------GDHVL 125 (415)
T ss_dssp TTCCHHHHHHHHHH----HHHHTCS-----------EEEEESSHHHHHHHHHHTTCC----------T-------TCEEE
T ss_pred CCCCchHHHHHHHH----HHHhCCC-----------eEEEeCCHHHHHHHHHHHHhC----------C-------CCEEE
Confidence 33566666676654 6677764 347889999999877654210 0 23455
Q ss_pred Eeccc-chHHHHH----HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 201 ASPAC-TELEVVM----LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 201 v~~s~-~s~~kaa----~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
+.... .+....+ ...|.++..++. .|+++|+++|++ .+.+|++...++.+|.+.|+++|+++|
T Consensus 126 ~~~~~y~~~~~~~~~~l~~~G~~v~~v~~----~d~~~le~ai~~--------~tklV~~e~~~NptG~v~dl~~I~~la 193 (415)
T 2fq6_A 126 MTNTAYEPSQDFCSKILSKLGVTTSWFDP----LIGADIVKHLQP--------NTKIVFLESPGSITMEVHDVPAIVAAV 193 (415)
T ss_dssp EETTSCHHHHHHHHHTGGGGTCEEEEECT----TCGGGGGGGCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EeCCCchHHHHHHHHHHHHcCcEEEEECC----CCHHHHHHhhcc--------CCcEEEEECCCCCCCEeecHHHHHHHH
Confidence 55444 3333332 345778888873 389999999876 577888889999999999999999999
Q ss_pred hh--cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCC
Q psy9807 276 RQ--KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 276 ~~--~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
++ ||+++|||++|+......| . .. .+|+++.++||+++.+.+ .|+++.++. .+...... ...
T Consensus 194 ~~~~~g~~livD~a~a~~~~~~p-~---~~---g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~l~~~----~~~-- 259 (415)
T 2fq6_A 194 RSVVPDAIIMIDNTWAAGVLFKA-L---DF---GIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQLREN----AYL-- 259 (415)
T ss_dssp HHHCTTCEEEEECTTTTTTSSCG-G---GG---TCSEEEEETTTTTTCSSSCCCEEEEECTT-THHHHHHH----HHH--
T ss_pred HhhcCCCEEEEECCCcccccCCc-c---cc---CCeEEEEeCccccCCCCCceEEEEEeCHH-HHHHHHHH----HHh--
Confidence 99 9999999999985432222 1 11 359999999999997765 677776553 33221110 000
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
.+. .......|..++ +.+.+..++++..++++++++.|++.|.+.
T Consensus 260 ~G~-------------~~~~~~a~~~~~--~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~ 304 (415)
T 2fq6_A 260 MGQ-------------MVDADTAYITSR--GLRTLGVRLRQHHESSLKVAEWLAEHPQVA 304 (415)
T ss_dssp TTC-------------CCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred cCC-------------CCCHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 000 112233454433 345667788888999999999999887654
No 153
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.73 E-value=7.4e-16 Score=159.31 Aligned_cols=285 Identities=9% Similarity=0.021 Sum_probs=171.6
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TEL 208 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~ 208 (561)
..++.+++++++|.| + ..++|+|||+|+..++.+++... .. ..++ .+++++.... .+.
T Consensus 72 ~~~l~~~la~~~g~~-~---------~v~~~~g~t~a~~~~~~~~~~~~-~~---~~~g------~~~vl~~~~~y~~~~ 131 (375)
T 2eh6_A 72 QEELAHKLVKHFWTE-G---------KVFFANSGTESVEAAIKLARKYW-RD---KGKN------KWKFISFENSFHGRT 131 (375)
T ss_dssp HHHHHHHHHHTSSSC-E---------EEEEESSHHHHHHHHHHHHHHHH-HH---TTCC------CCEEEEEBTCCCCSS
T ss_pred HHHHHHHHHhhcCCC-C---------eEEEeCchHHHHHHHHHHHHHHh-cc---CCCC------CCEEEEECCCcCCCc
Confidence 345567888888885 3 57999999999998887654321 00 0110 1245554443 222
Q ss_pred HHHHHhccCC------------eEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHH
Q psy9807 209 EVVMLDWLGK------------MLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIG 272 (561)
Q Consensus 209 ~kaa~~~g~~------------v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~ 272 (561)
..+...++.. +..+| .+|+++|+++|++ .+.+|+++...+.+|.+.| +++|+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~l~~--------~~~~v~~~~~~~~tG~~~~~~~~l~~i~ 199 (375)
T 2eh6_A 132 YGSLSATGQPKFHKGFEPLVPGFSYAK----LNDIDSVYKLLDE--------ETAGIIIEVIQGEGGVNEASEDFLSKLQ 199 (375)
T ss_dssp HHHHHHCBCGGGTTTTCSCCSSEEEEC----TTCHHHHHTTCCT--------TEEEEEECSEETTTTSEECCHHHHHHHH
T ss_pred hhhhhhcCCccccCCCCCCCCCceeCC----CchHHHHHHHhcC--------CeEEEEEeCccCCCCCcCCCHHHHHHHH
Confidence 3333333322 33333 3689999998865 5778888888888999988 99999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQ 352 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~ 352 (561)
++|++||+++++|++|++.............+. .+|+++++ |+++++.++|++++++. .. ..+... .+
T Consensus 200 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~d~~s~S--K~~~~g~~~G~~~~~~~-~~-~~~~~~-~~------ 267 (375)
T 2eh6_A 200 EICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNL-KPDVIALA--KGLGGGVPIGAILAREE-VA-QSFTPG-SH------ 267 (375)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSCCEEEEEEHH-HH-TTCCTT-SC------
T ss_pred HHHHHhCCEEEEeccccCCCCCCcchhhhhcCC-CCCEEEEc--ccccCCCCeEEEEEcHH-HH-hhhcCC-CC------
Confidence 999999999999999995322111111011121 35888666 99998888999998652 22 222110 00
Q ss_pred CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCcccc
Q psy9807 353 GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPL 432 (561)
Q Consensus 353 ~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~ 432 (561)
+. .+ ....+..+.+...+... .++.++..++++++.+.|++.+. ... +...+.+.++
T Consensus 268 ~~-----~~------~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~L~~~~~-~~~-~~~g~~~~~~-------- 324 (375)
T 2eh6_A 268 GS-----TF------GGNPLACRAGTVVVDEV--EKLLPHVREVGNYFKEKLKELGK-GKV-KGRGLMLGLE-------- 324 (375)
T ss_dssp CC-----SS------TTCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTS-SEE-EEETTEEEEE--------
T ss_pred CC-----CC------CCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhc-CCc-eEEEEEEEEE--------
Confidence 00 00 11233333333333221 16778888899999999988743 211 2223333332
Q ss_pred ccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcE
Q psy9807 433 GRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKI 512 (561)
Q Consensus 433 ~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~ 512 (561)
+... ..++.+.|.+.|..
T Consensus 325 -----------------------------------------------------------~~~~---~~~~~~~l~~~gi~ 342 (375)
T 2eh6_A 325 -----------------------------------------------------------LERE---CKDYVLKALEKGLL 342 (375)
T ss_dssp -----------------------------------------------------------CSSC---CHHHHHHHHHTTEE
T ss_pred -----------------------------------------------------------EcCc---HHHHHHHHHHCCCE
Confidence 2111 24677788777744
Q ss_pred EEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 513 HLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 513 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
. .+. +..++|+++. ..++++|+++++++|+++
T Consensus 343 ~-~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 343 I-NCT---AGKVLRFLPP-LIIQKEHIDRAISVLREI 374 (375)
T ss_dssp C-EEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHH
T ss_pred E-ecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHh
Confidence 3 332 3458999865 466889999999998764
No 154
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.73 E-value=2.8e-16 Score=166.24 Aligned_cols=212 Identities=13% Similarity=0.107 Sum_probs=140.6
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELE 209 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ 209 (561)
..++.+++++++|.+. .+++++|++|+..++.+... + ++.+++.... .+..
T Consensus 116 ~~~l~~~lA~l~g~~~-----------~v~~~sG~~Ai~~al~~l~~----------~-------Gd~Vi~~~~~y~~~~ 167 (445)
T 1qgn_A 116 TVVLEEKISALEGAES-----------TLLMASGMCASTVMLLALVP----------A-------GGHIVTTTDCYRKTR 167 (445)
T ss_dssp HHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHSC----------S-------SCEEEEETTSCHHHH
T ss_pred HHHHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHHhC----------C-------CCEEEEcCCCchhHH
Confidence 3344456677778752 47788888998877764311 0 2244444433 3333
Q ss_pred H----HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCce-EEEEEecCCCCCccccCHHHHHHHHhhcCceEEe
Q psy9807 210 V----VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDL-LQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHV 284 (561)
Q Consensus 210 k----aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p-~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhV 284 (561)
. .+...|.+++.+|.. |+++|+++|++ .+ .+|+++..++.+|.+.|+++|+++|++||++++|
T Consensus 168 ~~~~~~~~~~G~~v~~v~~~----d~~~l~~ai~~--------~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~liv 235 (445)
T 1qgn_A 168 IFIETILPKMGITATVIDPA----DVGALELALNQ--------KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCI 235 (445)
T ss_dssp HHHHHTGGGGTCEEEEECSS----CHHHHHHHHHH--------SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCEEEEeCCC----CHHHHHHHhcc--------CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEE
Confidence 3 234567888888843 89999999977 34 7888899999999999999999999999999999
Q ss_pred chhcccccccCccccccccCccccceeeecCCccccccc--cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccc
Q psy9807 285 DAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF--DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQ 362 (561)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~--g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (561)
|++|+.+....+ .- ..+|+++.++||+++.+. ..|+++.++ ..+..... +.... +
T Consensus 236 D~a~~~~~~~~~----~~---~g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~~~l~~----~~~~~--g--------- 292 (445)
T 1qgn_A 236 DGTFATPLNQKA----LA---LGADLVLHSATKFLGGHNDVLAGCISGPL-KLVSEIRN----LHHIL--G--------- 292 (445)
T ss_dssp ECTTTCTTTCCT----TT---TTCSEEEECTTTTTTCSSSCCCEEEEECH-HHHHHHHH----HHHHH--C---------
T ss_pred ECCCcccccCCc----cc---cCCEEEEECCcccccccccceEEEEEECH-HHHHHHHH----HHHHh--C---------
Confidence 999985543222 11 136999999999998543 278877754 33322111 00000 0
Q ss_pred ccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 363 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 363 ~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
-....+..|..++.+ +.+..++++..++++++.+.|++.|+++
T Consensus 293 ----~~~~~~~a~~~~~~l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~ 335 (445)
T 1qgn_A 293 ----GALNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAEILEAHPKVR 335 (445)
T ss_dssp ----CCCCHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred ----CCCCHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 012234445544433 3456677788888999999999998873
No 155
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.73 E-value=1.1e-15 Score=159.30 Aligned_cols=254 Identities=10% Similarity=-0.033 Sum_probs=155.8
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCC-ccccccCCCCC-CeEEeCChhHHHHHHHHHHHHHHHHHH
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLP-KEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQRV 183 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~~-~g~~t~ggT~anl~al~~ar~~~~~~~ 183 (561)
+.+.+...+. ....|.......++.+++.+|+++.+|.+ -+ .. ..++|+|||+++..++.+....
T Consensus 48 v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-------~~~~i~~t~g~~~al~~~~~~~~~~----- 114 (396)
T 3jtx_A 48 ITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVD-------ADNEILPVLGSREALFSFVQTVLNP----- 114 (396)
T ss_dssp HHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCC-------TTTSEEEESSHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCC-------CCCeEEEcCCcHHHHHHHHHHHhCC-----
Confidence 3344444443 22233333345789999999999999974 11 12 5799999999998777664211
Q ss_pred HhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 184 KEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 184 ~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
++. +..+.+++.... .++..++...|.+++.+|. ++..+|+++|++++.+ .+.+|+++...+
T Consensus 115 --g~~-----~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~--------~~~~v~l~~p~n 179 (396)
T 3jtx_A 115 --VSD-----GIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWK--------RTKLVFVCSPNN 179 (396)
T ss_dssp ----------CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH--------TEEEEEEESSCT
T ss_pred --CCc-----cCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhcc--------CcEEEEEECCCC
Confidence 000 000234444444 5666677888999999998 3457899999999976 567787778888
Q ss_pred CCccccCHHH---HHHHHhhcCceEEechhcccccccCccccccccC------ccccceeeecCCcccccc-ccceeEEe
Q psy9807 261 NCCAFDCLEE---IGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKG------VELADSFNFNPHKWMLVT-FDCSAMWL 330 (561)
Q Consensus 261 ~tG~idpl~e---I~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~g------i~~aDsi~~~~HK~l~~P-~g~g~l~~ 330 (561)
.||.+-|.++ |+++|++||+++++|.+|+............... -...+.+..+++|.++.| ..+|+++.
T Consensus 180 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (396)
T 3jtx_A 180 PSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAG 259 (396)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEE
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEe
Confidence 9999976555 9999999999999999998643322011111100 023478889999976644 45676655
Q ss_pred cChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 331 KDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 331 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
++.......... .+. +-....+...++...+. .+.+.+..++..++.+++.+.|++.
T Consensus 260 -~~~~~~~~~~~~-~~~------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 317 (396)
T 3jtx_A 260 -DAELLKNFLLYR-TYH------------------GSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQV 317 (396)
T ss_dssp -CHHHHHHHHHHH-HHH------------------TCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred -CHHHHHHHHHHH-hhc------------------ccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 443332211100 000 00012222222222222 3557777788888888999998875
No 156
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.72 E-value=1.1e-15 Score=161.73 Aligned_cols=253 Identities=13% Similarity=0.096 Sum_probs=144.8
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
+..++...++++. +++++|.+ ..+|++|||+||..++.+.+...+.+. ...+ +++++
T Consensus 58 ~~~~~~~~~l~~~----la~~~g~~-----------~~i~~~sGt~a~~~al~~l~~~~~~~~-~~~~-------gd~Vi 114 (437)
T 3bb8_A 58 LTTGRFNDAFEKK----LGEYLGVP-----------YVLTTTSGSSANLLALTALTSPKLGVR-ALKP-------GDEVI 114 (437)
T ss_dssp CBSCHHHHHHHHH----HHHHHTCS-----------EEEEESCHHHHHHHHHHHTTCGGGGGG-SCCT-------TCEEE
T ss_pred cCCChHHHHHHHH----HHHHHCCC-----------cEEEeCCHHHHHHHHHHHhhhcccccc-cCCC-------cCEEE
Confidence 3344555555554 46666765 359999999999888776421000000 0000 22444
Q ss_pred Eeccc-chHHHHHHhccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 201 ASPAC-TELEVVMLDWLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 201 v~~s~-~s~~kaa~~~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
+.... .+...++...|.+++.+|. . ++.+|+++|+++|.+ .+.+|+++. .+|...|+++|+++|++
T Consensus 115 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~---~~g~~~~~~~i~~l~~~ 183 (437)
T 3bb8_A 115 TVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSD--------KTKAIMIAH---TLGNLFDLAEVRRVADK 183 (437)
T ss_dssp ECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCT--------TEEEEEEEC---GGGCCCCHHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCC--------CCeEEEEeC---CCCChhcHHHHHHHHHH
Confidence 44444 6777777888999999988 4 789999999999866 466666654 56888999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCcccc------C-
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKH------D- 350 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~------~- 350 (561)
||+++|+|+||+.+.... .+.. + ..+|.++.+++|....|.+.|.+++.+...+...+.....|-.. .
T Consensus 184 ~~~~li~D~a~~~g~~~~--~~~~--~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (437)
T 3bb8_A 184 YNLWLIEDCCDALGSTYD--GKMA--G-TFGDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCD 258 (437)
T ss_dssp HTCEEEEECTTCTTCEET--TEET--T-SSSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC-------
T ss_pred cCCEEEEECccccCceEC--Ceec--c-cccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCcccccccccc
Confidence 999999999998544331 1111 1 12477767643333334445555554543333221110011000 0
Q ss_pred ---------CCCCCC-CC-Cccc---ccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 351 ---------QQGSAP-DY-RHWQ---IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 351 ---------~~~~~~-~~-~~~~---~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
..+..+ .+ ...+ ....-+...+...+++.. .+.+.+.+++..++++++.+.|++++++.++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 334 (437)
T 3bb8_A 259 NTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQ--LERIEEFVEKRKANFKYLKDALQSCADFIELP 334 (437)
T ss_dssp ---------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHGGGGTTTEECC
T ss_pred cccccccccccccccccccccccccccCcccCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhccCCccccC
Confidence 000000 00 0000 111111223333333333 23456777778899999999999988876653
No 157
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.72 E-value=7.6e-16 Score=159.89 Aligned_cols=237 Identities=10% Similarity=0.015 Sum_probs=148.5
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 124 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 124 sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
+|...++|+++ +++++|.++ ..++++|||+|+..++.+.. +. + ++++++..
T Consensus 35 ~~~~~~l~~~~---~a~~~g~~~----------~~v~~~sgt~al~~al~~l~---~~------~-------Gd~Vi~~~ 85 (377)
T 3ju7_A 35 GPINQRFEQTI---MSGFFQNRG----------AVTTVANATLGLMAAIQLKK---RK------K-------GKYALMPS 85 (377)
T ss_dssp CHHHHHHHHHH---HHHTSTTCS----------EEEEESCHHHHHHHHHHHHS---CT------T-------CCEEEEES
T ss_pred CHHHHHHHHHH---HHHHhCCCC----------eEEEeCCHHHHHHHHHHHcC---CC------C-------cCEEEECC
Confidence 67777777754 166667222 46999999999988776531 00 0 23455444
Q ss_pred cc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCc
Q psy9807 204 AC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDV 280 (561)
Q Consensus 204 s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~ 280 (561)
.. .+...++...|.+++.+++ +++.+|+++|+++|.. .+ .++.+|+. ++.+|.+.|+++|+++|+ ||+
T Consensus 86 ~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~--~~---~~tk~v~~---~~~~G~~~~~~~i~~la~-~~~ 156 (377)
T 3ju7_A 86 FTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEE--LK---EEVAIVVP---YATFGSWMNLEEYEELEK-KGV 156 (377)
T ss_dssp SSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHH--HG---GGEEEECC---BCGGGBCCCCHHHHHHHH-TTC
T ss_pred CCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhc--CC---CCceEEEE---ECCCCCccCHHHHHHHHh-cCC
Confidence 44 6677777888999999998 5789999999999843 11 02556653 456799999999999999 999
Q ss_pred eEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCc
Q psy9807 281 WLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRH 360 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (561)
++|+|+||+.+..... +..-......+.+++++||++++ ...|++++++........... .+-. ...+..
T Consensus 157 ~vi~D~a~a~g~~~~~--~~~g~~~~d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~~~~~~~-~~g~------~~~~~~ 226 (377)
T 3ju7_A 157 PVVVDAAPGFGLMNGG--MHYGQDFSGMIIYSFHATKPFGI-GEGGLIYSKNEEDIQRIKRMG-NFGF------DTNREC 226 (377)
T ss_dssp CBEEECTTCTTCEETT--EETTTTCSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHT-BTTB------CTTSCB
T ss_pred EEEEECCCccCCeECC--EeccCCCCcEEEEECCCCCcCCC-CCcEEEEECCHHHHHHHHHHH-hcCC------CCCCce
Confidence 9999999875433221 11101112346777778999987 456666666654433221110 0000 000000
Q ss_pred ccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 361 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 361 ~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
......-+...+..+..+.. .+.++++.++..++++++.+.|++++++
T Consensus 227 ~~~g~~~~~~~~~aa~~~~~--l~~l~~~~~~~~~~~~~~~~~L~~~~~~ 274 (377)
T 3ju7_A 227 TMMGFNCKMSEYAAAIGIAT--MKKWDDKLKERTRISEWYKQLLQSNGLM 274 (377)
T ss_dssp CSSCCBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred eeccccCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 01111122344444443333 4667888999999999999999988764
No 158
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.72 E-value=1.2e-15 Score=161.14 Aligned_cols=311 Identities=10% Similarity=0.004 Sum_probs=193.9
Q ss_pred ccccChhhHHHHHHHHHHHHHhc-CCCccccccCCCCCC---eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKML-DLPKEFLACSGGKGG---GVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDI 195 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~-g~~~~~~~~~~~~~~---g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~ 195 (561)
.|.......++.+.+.+|+.+.. +.+++ . .++|+|||+|+..++.+..+.
T Consensus 83 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~---------~~~~i~~t~g~~~al~~~~~~l~~~----------------- 136 (430)
T 2x5f_A 83 PYAPPQGIEELRDLWQQKMLRDNPELSID---------NMSRPIVTNALTHGLSLVGDLFVNQ----------------- 136 (430)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHCTTCCGG---------GBCCCEEESHHHHHHHHHHHHHCCT-----------------
T ss_pred ccCCCCCCHHHHHHHHHHHhccCcccCCC---------ccceEEEcCCchHHHHHHHHHHhCC-----------------
Confidence 34333346788888888887663 34332 4 799999999988777654210
Q ss_pred ccceEEeccc-chHHHHHHh-ccCCeEEeeC-C-CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---H
Q psy9807 196 IANLIASPAC-TELEVVMLD-WLGKMLDLPK-E-FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---L 268 (561)
Q Consensus 196 ~~~~vv~~s~-~s~~kaa~~-~g~~v~~v~~-~-~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l 268 (561)
++++++.... .+....+.. .|.+++.+|. . ++.+|+++|+++|++ . +..+.+|+.+...+.||.+-| +
T Consensus 137 gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~--~---~~~~~~v~i~~p~nptG~~~~~~~l 211 (430)
T 2x5f_A 137 DDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQS--Y---NKDKVIMILNYPNNPTGYTPTHKEV 211 (430)
T ss_dssp TCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHH--C---CSSEEEEEECSSCTTTCCCCCHHHH
T ss_pred CCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHh--c---CCCCEEEEEcCCCCCCCCcCCHHHH
Confidence 2345555444 667777777 8899999998 4 468999999999966 2 225677777778888999988 8
Q ss_pred HHHHHHHhh-----cCceEEechhcccccccCccccc---cccCcccc---ceeeecCCccccccc-cceeEEe--cChh
Q psy9807 269 EEIGQVCRQ-----KDVWLHVDAAYAGSAFICPENRY---LMKGVELA---DSFNFNPHKWMLVTF-DCSAMWL--KDPS 334 (561)
Q Consensus 269 ~eI~~ia~~-----~~~~lhVDaA~gg~~~~~~~~~~---~~~gi~~a---Dsi~~~~HK~l~~P~-g~g~l~~--r~~~ 334 (561)
++|+++|++ ||+++++|.+|+........... .+.+.... +.+..++||+++.|. .+|++++ +++.
T Consensus 212 ~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~ 291 (430)
T 2x5f_A 212 TTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQT 291 (430)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHH
T ss_pred HHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHH
Confidence 999999999 99999999999865432211111 11122223 566889999997552 3688887 2443
Q ss_pred hHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHh----
Q psy9807 335 WVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-----VKYLQEYIRKQISLAKEFEQLVR---- 405 (561)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-----~~g~~~~~~~~~~la~~l~~~l~---- 405 (561)
................ .-....+..+++.+.+. .+.++++.++..++.+++.+.|+
T Consensus 292 ~~~~l~~~~~~~~~~~---------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 356 (430)
T 2x5f_A 292 TKEVLEAKVKGLIRSN---------------ISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQY 356 (430)
T ss_dssp HHHHHHHHHHHHHHTT---------------TSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHhhhhhcc---------------cCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 3322111100000000 00012233333333332 22344477778888899999998
Q ss_pred cCCCeEEeccccccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhh
Q psy9807 406 SDDRFEVIYEVLMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVL 484 (561)
Q Consensus 406 ~~~g~~l~~~~~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~ 484 (561)
+. ++++..+ ..+. +.+++.
T Consensus 357 ~~-g~~~~~~-~~g~~~~~~~~---------------------------------------------------------- 376 (430)
T 2x5f_A 357 HS-HWQAYDF-NSGYFMAIKVH---------------------------------------------------------- 376 (430)
T ss_dssp TT-TEEECCC-CBSSEEEEEES----------------------------------------------------------
T ss_pred CC-CceeeCC-CceEEEEeCCC----------------------------------------------------------
Confidence 44 6776543 3333 333221
Q ss_pred hcceeeecCCCcHHHHHHHHHHHh-CCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 485 MGLVCFRLKGPNEINEKLLKRING-NGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 485 ~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+.+ ..++.+.|.+ .|..+ .+. +..++|++++. +++++++++++.|.++.+++
T Consensus 377 ---------~~~--~~~~~~~l~~~~gi~v-~~g---~~~~iRis~~~--~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 377 ---------DVD--PEALRKHLIDKYSIGV-IAL---NATDIRIAFSC--VEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp ---------SSC--HHHHHHHHHHHHCEEC-EEC---SSSEEEEEGGG--SCGGGHHHHHHHHHHHHHHH
T ss_pred ---------CCC--HHHHHHHHHHhCCEEE-ecC---CCCeEEEEEec--CCHHHHHHHHHHHHHHHHhc
Confidence 111 3467888887 66544 332 45589999773 47789999999998887653
No 159
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.72 E-value=2.3e-16 Score=165.82 Aligned_cols=219 Identities=10% Similarity=0.066 Sum_probs=146.5
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++ .+++++++|.+ ..++++||++|+..++.+.... ++.+++.
T Consensus 79 ~~p~~~~l----~~~la~~~g~~-----------~~~~~~sG~~Ai~~al~~l~~~-----------------Gd~Vi~~ 126 (414)
T 3ndn_A 79 GNPTVSVF----EERLRLIEGAP-----------AAFATASGMAAVFTSLGALLGA-----------------GDRLVAA 126 (414)
T ss_dssp CCHHHHHH----HHHHHHHHTCS-----------EEEEESSHHHHHHHHHHTTCCT-----------------TCEEEEE
T ss_pred CChHHHHH----HHHHHHHHCCC-----------cEEEECCHHHHHHHHHHHHhCC-----------------CCEEEEc
Confidence 34544444 45667787764 3599999999987776653110 2344444
Q ss_pred ccc-chHHHHH----HhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PAC-TELEVVM----LDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~-~s~~kaa----~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
... .+....+ ...|.+++.+|.. |+++|+++|++ .+.+|+++..++.+|.+.|+++|+++|++
T Consensus 127 ~~~y~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~ai~~--------~t~~v~le~p~NptG~~~~l~~i~~la~~ 194 (414)
T 3ndn_A 127 RSLFGSCFVVCSEILPRWGVQTVFVDGD----DLSQWERALSV--------PTQAVFFETPSNPMQSLVDIAAVTELAHA 194 (414)
T ss_dssp SCCCHHHHHHHHTHHHHTTCEEEEECTT----CHHHHHHHTSS--------CCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHcCcEEEEeCCC----CHHHHHHhcCC--------CCeEEEEECCCCCCCccccHHHHHHHHHH
Confidence 444 3333333 3378888888843 89999999876 46688889999999999999999999999
Q ss_pred cCceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCCC
Q psy9807 278 KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGSA 355 (561)
Q Consensus 278 ~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (561)
||+++++|++|+.+....+. -. .+|.++.++||+++.+.. .|+++.++. .+...+.......
T Consensus 195 ~g~~livDe~~~~~~~~~~~----~~---g~div~~S~sK~l~~~G~~~~G~vv~~~~-~~~~~l~~~~~~~-------- 258 (414)
T 3ndn_A 195 AGAKVVLDNVFATPLLQQGF----PL---GVDVVVYSGTKHIDGQGRVLGGAILGDRE-YIDGPVQKLMRHT-------- 258 (414)
T ss_dssp TTCEEEEECTTTHHHHCCCG----GG---TCSEEEEETTTTTTCSSCCCCEEEEECHH-HHTTHHHHHHHHH--------
T ss_pred cCCEEEEECCCcccccCCch----hc---CCCeEeccCCccccCCCCceEEEEEECHH-HHHHHHHHHHHHc--------
Confidence 99999999999855433321 11 349999999999986543 677766443 2221111000000
Q ss_pred CCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 356 PDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 356 ~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
+.....+..|..++. .+.+..++++..++++++.+.|++.|++..+
T Consensus 259 ----------g~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v 304 (414)
T 3ndn_A 259 ----------GPAMSAFNAWVLLKG--LETLAIRVQHSNASAQRIAEFLNGHPSVRWV 304 (414)
T ss_dssp ----------CCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred ----------CCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEeEE
Confidence 011234455655543 3446777888899999999999999887644
No 160
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.71 E-value=4.2e-15 Score=160.02 Aligned_cols=335 Identities=11% Similarity=0.071 Sum_probs=195.5
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcC-CCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc
Q psy9807 118 GFTWIASPACTELEVVMLDWLGKMLD-LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDII 196 (561)
Q Consensus 118 ~~~~~~sp~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~ 196 (561)
...|..+....++.+.+.+|+++..| ++-+ ....++|+|+|+++..++.+..+. + ....
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~-------~~~i~~t~G~~~ai~~~~~~l~~~--------g-----d~~~ 181 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPAD-------PDNIYLTTGASDGISTILKILVSG--------G-----GKSR 181 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCC-------GGGEEEESSHHHHHHHHHHHHCCC--------C-----GGGS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCC-------cccEEEcCCHHHHHHHHHHHHcCC--------C-----CCCC
Confidence 34566666677899999999999885 6421 126799999999987766543110 0 0001
Q ss_pred cceEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHH
Q psy9807 197 ANLIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLE 269 (561)
Q Consensus 197 ~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~ 269 (561)
+.+++.... .++..++...|.+++.++. + ++.+|+++|+++|++ ... +..+.+|+++...+.||.+ ++++
T Consensus 182 d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~--~~~-~~~~k~i~l~np~NPTG~v~s~~~l~ 258 (498)
T 3ihj_A 182 TGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQE--AKD-HCDPKVLCIINPGNPTGQVQSRKCIE 258 (498)
T ss_dssp EEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHH--HTT-TSEEEEEEEESSCTTTCCCCCHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHh--hhc-cCCCeEEEEECCCCCCCCcCCHHHHH
Confidence 134444444 5666677888999999998 3 468999999999977 432 2257778877888889998 4577
Q ss_pred HHHHHHhhcCceEEechhcccccccCc-cc---cccccCc-----cccc-eeeecCCcccc-cc-ccceeEEe--cChhh
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICP-EN---RYLMKGV-----ELAD-SFNFNPHKWML-VT-FDCSAMWL--KDPSW 335 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~-~~---~~~~~gi-----~~aD-si~~~~HK~l~-~P-~g~g~l~~--r~~~~ 335 (561)
+|+++|++||+++++|.+|+....-.. .. ......+ .... .+..+++|.+. .| .-.|.+.+ .+...
T Consensus 259 ~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l 338 (498)
T 3ihj_A 259 DVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEI 338 (498)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHH
T ss_pred HHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHH
Confidence 899999999999999999985433211 11 1111100 0012 34569999994 23 34555553 45543
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh------------HHHHHHHHHHHHHHHHHHHHH
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG------------VKYLQEYIRKQISLAKEFEQL 403 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g------------~~g~~~~~~~~~~la~~l~~~ 403 (561)
..........++. ...+..++....+. .....++.++..+.++++.+.
T Consensus 339 ~~~l~~~~~~~~~--------------------~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 398 (498)
T 3ihj_A 339 KGQLVKLLSVRLC--------------------PPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDL 398 (498)
T ss_dssp HHHHHHHHHHSCC--------------------CCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCC--------------------CCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322111001100 01111111111111 123456677888899999999
Q ss_pred HhcCCCeEEeccccccceee-ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhh
Q psy9807 404 VRSDDRFEVIYEVLMGLVCF-RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 482 (561)
Q Consensus 404 l~~~~g~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~ 482 (561)
|+++||+++.. +..+...| ++.. |... + +.+
T Consensus 399 L~~~~g~~~~~-p~gg~~~~~~l~~---p~~~------------------~--------~~~------------------ 430 (498)
T 3ihj_A 399 FNQVPGIHCNP-LQGAMYAFPRIFI---PAKA------------------V--------EAA------------------ 430 (498)
T ss_dssp HHTSTTEECCC-CCBSSEECCEECC---CHHH------------------H--------HHH------------------
T ss_pred HhcCCCcEecC-CCeEEEEEEeccC---chhh------------------h--------HHH------------------
Confidence 99999988764 34455444 2210 0000 0 000
Q ss_pred hhhcceeeecCCCcHHHHH--HHHHHHhCCcEEEEeeeE---CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 483 VLMGLVCFRLKGPNEINEK--LLKRINGNGKIHLVPSKI---RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 483 ~~~~~v~f~~~~~~~~~~~--l~~~L~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
...+.+ ..+ +.+.|.+.|..++.+... .+...+|+++. .++++++++++.|.++.+++.++
T Consensus 431 --------~~~g~~--~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~---~~~e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 431 --------QAHQMA--PDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL---PPVEKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp --------HHTTSC--HHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC---SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------HhcCCC--cHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHHHHHH
Confidence 000111 122 344555667666543322 45668999974 47889999999999988876543
No 161
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.70 E-value=5.3e-16 Score=162.03 Aligned_cols=209 Identities=12% Similarity=0.060 Sum_probs=136.0
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccch-HH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACTE-LE 209 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~s-~~ 209 (561)
..++.+.+++++|.+. .++++|||+||..++. ... + ++.+++....|. ..
T Consensus 57 ~~~lr~~la~~~g~~~-----------~i~~~sGt~a~~~al~-~~~----------~-------gd~Vi~~~~~y~~~~ 107 (393)
T 1n8p_A 57 RENLERAVAALENAQY-----------GLAFSSGSATTATILQ-SLP----------Q-------GSHAVSIGDVYGGTH 107 (393)
T ss_dssp HHHHHHHHHHHTTCSE-----------EEEESCHHHHHHHHHH-TSC----------S-------SCEEEEESSCCHHHH
T ss_pred HHHHHHHHHHHhCCCc-----------EEEECChHHHHHHHHH-HcC----------C-------CCEEEEeCCCchHHH
Confidence 3445556688888752 4777888999877765 210 0 124444444332 33
Q ss_pred H----HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhc----Cce
Q psy9807 210 V----VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQK----DVW 281 (561)
Q Consensus 210 k----aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~----~~~ 281 (561)
. .+...|.+++.+|.+ | ++|+++|++ .+.+|+++..++.+|.+.|+++|+++|++| |++
T Consensus 108 ~~~~~~~~~~G~~v~~v~~~----d-~~l~~~i~~--------~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~ 174 (393)
T 1n8p_A 108 RYFTKVANAHGVETSFTNDL----L-NDLPQLIKE--------NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVI 174 (393)
T ss_dssp HHHHHTSTTTCSCCEEESSH----H-HHHHHHSCS--------SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCE
T ss_pred HHHHHHHHHcCcEEEEeCCC----h-HHHHHhccc--------CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCE
Confidence 3 334567888888843 6 888888865 577888899999999999999999999999 999
Q ss_pred EEechhcccccccCccccccccCccccceeeecCCccccccc-cc-eeEEecChhhHHHhhccCCCccccCCCCCCCCCC
Q psy9807 282 LHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DC-SAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYR 359 (561)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~-g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (561)
+|+|++|+.+....+ . .. .+|.++.++||+++.|. -. |+++.++...+.........+
T Consensus 175 livD~a~~~~~~~~~--~----~~-~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~------------- 234 (393)
T 1n8p_A 175 LVVDNTFLSPYISNP--L----NF-GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAI------------- 234 (393)
T ss_dssp EEEECTTTHHHHCCG--G----GG-TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHH-------------
T ss_pred EEEeCCccccccCCH--H----Hc-CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhc-------------
Confidence 999999987654211 1 11 36999999999988543 14 777776554433221110000
Q ss_pred cccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy9807 360 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR 409 (561)
Q Consensus 360 ~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g 409 (561)
+........|..++.+ +.+...+++..++++++.+.|++.|.
T Consensus 235 ------g~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~ 276 (393)
T 1n8p_A 235 ------GAIPSPFDAWLTHRGL--KTLHLRVRQAALSANKIAEFLAADKE 276 (393)
T ss_dssp ------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ------CCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 0011233444433333 33566677778888999999988765
No 162
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.70 E-value=9e-16 Score=160.16 Aligned_cols=293 Identities=13% Similarity=0.074 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
....++.+.+++++|.+ ..+||+|||+||..++.+++..... ...+ .+++++.... .
T Consensus 82 ~~~~~l~~~la~~~g~~-----------~v~~~~gg~~a~~~al~~~~~~~~~--~~~~--------~~~vi~~~~~yh~ 140 (397)
T 2ord_A 82 RPQMELAELLSKNTFGG-----------KVFFANTGTEANEAAIKIARKYGKK--KSEK--------KYRILSAHNSFHG 140 (397)
T ss_dssp HHHHHHHHHHHHTTTSC-----------EEEEESSHHHHHHHHHHHHHHHHHH--HCTT--------CCEEEEEBTCCCC
T ss_pred HHHHHHHHHHHHhcCCC-----------eEEEeCCHHHHHHHHHHHHHHHhhc--CCCC--------CceEEEEcCCcCC
Confidence 45566667778888742 4699999999999988876542211 0000 1234444333 3
Q ss_pred hHHHHHHhccCC------------eEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcc----ccCHHH
Q psy9807 207 ELEVVMLDWLGK------------MLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCA----FDCLEE 270 (561)
Q Consensus 207 s~~kaa~~~g~~------------v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~----idpl~e 270 (561)
+...++...|.+ ++.+| ..|+++|++++++ .+.+|+++...+.+|. .+++++
T Consensus 141 ~~~~~~~~~g~~~~~~~~~p~~~~~~~~~----~~d~~~l~~~l~~--------~~~~v~~~~~~nptG~~~~~~~~l~~ 208 (397)
T 2ord_A 141 RTLGSLTATGQPKYQKPFEPLVPGFEYFE----FNNVEDLRRKMSE--------DVCAVFLEPIQGESGIVPATKEFLEE 208 (397)
T ss_dssp SSHHHHHHSBCHHHHGGGCSCCTTEEEEC----TTCHHHHHHHCCT--------TEEEEEECSEECTTTCEECCHHHHHH
T ss_pred CchhhhhccCChhhccccCCCCCCeeEec----CCCHHHHHHHhhc--------CeEEEEEecccCCCCcccCCHHHHHH
Confidence 344455555554 66666 3489999998865 5778888888889998 479999
Q ss_pred HHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccC
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHD 350 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~ 350 (561)
|+++|++||+++++|++|++.............++ .+|.++ ++|+++++..+|++++++.- . .+.. . .
T Consensus 209 l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~s--~sK~~~~G~r~G~~~~~~~~-~--~l~~--~----~ 276 (397)
T 2ord_A 209 ARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGV-VPDVLT--TAKGLGGGVPIGAVIVNERA-N--VLEP--G----D 276 (397)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEE--ECGGGGTTSCCEEEEECSTT-C--CCCT--T----S
T ss_pred HHHHHHHcCCEEEEEecccCCccCccchhhhhhCC-CCCeee--eccccCCCcCeEEEEEchHh-c--ccCC--C----C
Confidence 99999999999999999985321111111000121 257664 48999976779999886641 1 1110 0 0
Q ss_pred CCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEe--ccccccceeeeccc
Q psy9807 351 QQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD-RFEVI--YEVLMGLVCFRLKH 427 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-g~~l~--~~~~~~~v~f~~~~ 427 (561)
. . ..+ ..-.+....+..+++.+.. +++.++..++++++.+.|++.+ ++.++ .++..+.+.|+
T Consensus 277 ~-~-----~~~---~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~--- 341 (397)
T 2ord_A 277 H-G-----TTF---GGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQ--- 341 (397)
T ss_dssp S-C-----CSS---TTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEE---
T ss_pred c-C-----CCC---CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEE---
Confidence 0 0 000 0001112222333333332 4566777788888888887642 22211 12222333332
Q ss_pred CccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHH
Q psy9807 428 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRIN 507 (561)
Q Consensus 428 ~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~ 507 (561)
+... ....++.+.|.
T Consensus 342 ----------------------------------------------------------------~~~~-~~~~~l~~~l~ 356 (397)
T 2ord_A 342 ----------------------------------------------------------------FREE-VSNREVATKCF 356 (397)
T ss_dssp ----------------------------------------------------------------ECTT-SCHHHHHHHHH
T ss_pred ----------------------------------------------------------------ECCh-HHHHHHHHHHH
Confidence 2111 11346788888
Q ss_pred hCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 508 GNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 508 ~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
+.|... .+. +..++|+++. ..++++|++++++.|+++.+
T Consensus 357 ~~gi~v-~~~---~~~~iRis~~-~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 357 ENKLLV-VPA---GNNTIRFLPP-LTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp HTTEEC-EEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHH
T ss_pred HCCCEE-ccC---CCCEEEEECC-cCCCHHHHHHHHHHHHHHHh
Confidence 877443 332 3458999854 46689999999999988754
No 163
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.70 E-value=1.3e-15 Score=161.44 Aligned_cols=191 Identities=7% Similarity=-0.034 Sum_probs=115.6
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcC-CC-CCCccccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAH-PD-WKDSDIIA 197 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~-~~-~~~~~~~~ 197 (561)
.|.......++++.+.+|+.+.+|.+-. ....+||+|||+|+..++.+.... ++ ++ +...+.++
T Consensus 78 ~y~~~~g~~~lr~~ia~~l~~~~g~~~~-------~~~i~~t~G~t~al~~~~~~l~~~-------gd~~~~~~~~~~g~ 143 (444)
T 3if2_A 78 NYSNPQGDSAFIDALVGFFNRHYDWNLT-------SENIALTNGSQNAFFYLFNLFGGA-------FVNEHSQDKESKSV 143 (444)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESSHHHHHHHHHHHSSEE-------EECC-------CEE
T ss_pred ccCCCCCCHHHHHHHHHHHHhhcCCCCC-------HHHEEEecCcHHHHHHHHHHHhCC-------Cccccccccccccc
Confidence 3444445678999999999888876421 126899999999998877653210 00 00 00000000
Q ss_pred --ceEEe-ccc-chHHHHH------HhccCCeEEeeC-C-CC----ccChhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 198 --NLIAS-PAC-TELEVVM------LDWLGKMLDLPK-E-FL----ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 198 --~~vv~-~s~-~s~~kaa------~~~g~~v~~v~~-~-~g----~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
++++. ... .....++ ...+..++.+|. . +| .+|+++|++++++ .. ..+.+|+++..++.
T Consensus 144 ~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~--~~---~~~~~v~i~~p~np 218 (444)
T 3if2_A 144 DKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPAL--KE---GRIGAICCSRPTNP 218 (444)
T ss_dssp EEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHH--HT---TCEEEEEEESSCTT
T ss_pred cceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHh--cC---CCceEEEeCCCCCC
Confidence 23332 112 2222211 113455666666 3 33 7999999998532 11 15677888777889
Q ss_pred CccccC---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEe
Q psy9807 262 CCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWL 330 (561)
Q Consensus 262 tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~ 330 (561)
||.+-| +++|+++|++||+++|+|++|+...... .+..........+.++.++||++.....+|+++.
T Consensus 219 tG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~ 289 (444)
T 3if2_A 219 TGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI-IYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVA 289 (444)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEEC
T ss_pred CCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccc-ccccccccCCCCEEEEechhhccCCCCceEEEEE
Confidence 999988 8999999999999999999997421100 0111111112347889999998554466776665
No 164
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.69 E-value=4.7e-15 Score=154.34 Aligned_cols=292 Identities=12% Similarity=0.029 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
..+++.+++++++|.+ ..+|++|||+||..++.+++...... .+ .. ...+++++.... ...
T Consensus 79 ~~~~l~~~la~~~g~~-----------~v~~~~~gt~a~~~al~~~~~~~~~~---~~--~~--~~~~~vi~~~~~~~~~ 140 (392)
T 3ruy_A 79 QLGPWYEKVAKLTNKE-----------MVLPMNTGAEAVETAIKTARRWAYDV---KK--VE--ANRAEIIVCEDNFHGR 140 (392)
T ss_dssp THHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHHHHHHHT---SC--CC--TTCCEEEEETTCCCCS
T ss_pred HHHHHHHHHHHhcCCC-----------EEEEeCcHHHHHHHHHHHHHHhhhhc---cC--CC--CCCcEEEEEcCCcCCC
Confidence 4455667788888832 47999999999999998776531100 00 00 001234443333 233
Q ss_pred HHHH-HhccC------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHH
Q psy9807 209 EVVM-LDWLG------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEI 271 (561)
Q Consensus 209 ~kaa-~~~g~------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI 271 (561)
..++ .+.+. .+..++ ..|+++|+++|++ .+.+|+++...+.+|.+.| +++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~l~~--------~~~~v~~~~~~nptG~~~~~~~~l~~i 208 (392)
T 3ruy_A 141 TMGAVSMSSNEEYKRGFGPMLPGIIVIP----YGDLEALKAAITP--------NTAAFILEPIQGEAGINIPPAGFLKEA 208 (392)
T ss_dssp SHHHHHTCSCTTTTTTCCSCCSSEEEEC----TTCHHHHHHHCCT--------TEEEEEECSSBSTTTSBCCCTTHHHHH
T ss_pred CHhhhhccCChhhccccCCCCCCCeeeC----cccHHHHHHHhcc--------CeEEEEEeCccCCCCCccCCHHHHHHH
Confidence 2232 33221 133333 3389999999876 5778888889999999998 9999
Q ss_pred HHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccC
Q psy9807 272 GQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHD 350 (561)
Q Consensus 272 ~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~ 350 (561)
+++|++||+++++|++|++.............++ ..|.++++ |++++- ...|+++.++ .... .+.. +..
T Consensus 209 ~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~~~S--K~l~gG~~~~G~~~~~~-~~~~-~~~~---~~~-- 278 (392)
T 3ruy_A 209 LEVCKKENVLFVADEIQTGLGRTGKVFACDWDNV-TPDMYILG--KALGGGVFPISCAAANR-DILG-VFEP---GSH-- 278 (392)
T ss_dssp HHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEEEECH-HHHT-TCCT---TSS--
T ss_pred HHHHHHcCCEEEEeechhCCCccccchhhhccCC-CCCEEEEc--hhhhCChhhhEEEEECH-HHHh-hhcc---CCc--
Confidence 9999999999999999974322211111111122 35777664 987652 3477777743 3221 1110 000
Q ss_pred CCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC--CCeEEeccccccceeeecccC
Q psy9807 351 QQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD--DRFEVIYEVLMGLVCFRLKHW 428 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~--~g~~l~~~~~~~~v~f~~~~~ 428 (561)
+ .+-....+..+++...+.....++..++..++++++.+.|++. +.+... ++..+.+.|
T Consensus 279 --~-----------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~g~~~~~----- 339 (392)
T 3ruy_A 279 --G-----------STFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPMITEV-RGKGLFIGI----- 339 (392)
T ss_dssp --C-----------CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCCTTEEEE-EEETTEEEE-----
T ss_pred --C-----------CCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcCCCceEE-EeeeeEEEE-----
Confidence 0 0001223333333333332222677888889999999999986 223322 122333333
Q ss_pred ccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHh
Q psy9807 429 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRING 508 (561)
Q Consensus 429 ~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~ 508 (561)
.+.+ ...++.+.|.+
T Consensus 340 --------------------------------------------------------------~~~~---~~~~l~~~l~~ 354 (392)
T 3ruy_A 340 --------------------------------------------------------------ELNE---PARPYCEQLKA 354 (392)
T ss_dssp --------------------------------------------------------------EESS---CSHHHHHHHHT
T ss_pred --------------------------------------------------------------EEcc---hHHHHHHHHHH
Confidence 2211 13467888887
Q ss_pred CCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q psy9807 509 NGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLT 550 (561)
Q Consensus 509 ~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 550 (561)
.|.. +.+. +..++|++++ ..++++|+++++++|+++.
T Consensus 355 ~gi~-v~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 355 AGLL-CKET---HENVIRIAPP-LVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp TTEE-CCCB---TTTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred CCcE-EecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHh
Confidence 7744 3332 3458999855 5668899999999998764
No 165
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.69 E-value=1.1e-14 Score=151.73 Aligned_cols=295 Identities=12% Similarity=-0.004 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
....+++.+++++.+|.+ ..+||+|||+||..|+.+++...... ++ ..+++++....
T Consensus 77 ~~~~~~l~~~la~~~~~~-----------~v~~~~gg~ea~~~al~~~~~~~~~~----g~------~~~~vi~~~~~yh 135 (395)
T 3nx3_A 77 NENIAAAAKNLAKASALE-----------RVFFTNSGTESIEGAMKTARKYAFNK----GV------KGGQFIAFKHSFH 135 (395)
T ss_dssp CHHHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHHHHHHHT----TC------TTCEEEEETTCCC
T ss_pred CHHHHHHHHHHHHhcCCC-----------eEEEeCCHHHHHHHHHHHHHHHhhcc----CC------CCCEEEEEcCCcC
Confidence 345666777888888732 57999999999999998877543211 00 01244444333
Q ss_pred chHHHHHHhc------------cCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HH
Q psy9807 206 TELEVVMLDW------------LGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LE 269 (561)
Q Consensus 206 ~s~~kaa~~~------------g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~ 269 (561)
.+...+.... +..+..+| ..|+++|+++|++ .+.+|++....+++|.+.| ++
T Consensus 136 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~l~~--------~~~~v~~~~~~~~~G~~~~~~~~l~ 203 (395)
T 3nx3_A 136 GRTLGALSLTANEKYQKPFKPLISGVKFAK----YNDISSVEKLVNE--------KTCAIILESVQGEGGINPANKDFYK 203 (395)
T ss_dssp CSSHHHHTTCCCHHHHGGGCSCCSCEEEEC----TTCHHHHHTTCCT--------TEEEEEEESEECTTSCEECCHHHHH
T ss_pred CCCHHHHhhcCCcccccccCCCCCCcEEeC----CCCHHHHHHhccC--------CeEEEEEeCccCCCCcccCCHHHHH
Confidence 1222222222 13455555 3479999998866 5677888888888899988 99
Q ss_pred HHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCcccc
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
+|+++|++||+++|+|.+|.+.......+.....++ ..|.+++ .|.++.....|+++.++. .+...+... ..
T Consensus 204 ~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~~~G~~~~~~~-~~~~~~~~~---~~- 275 (395)
T 3nx3_A 204 ALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQI-LPDIMTS--AKALGCGLSVGAFVINQK-VASNSLEAG---DH- 275 (395)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGTTTSCCEEEEECHH-HHHHHSCTT---CC-
T ss_pred HHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCC-CCCEEEe--cccccCCCceEEEEEchh-hhhhhcCCc---cc-
Confidence 999999999999999999986432211111111122 2466665 598887777888877543 312222110 00
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEeccccccceeeec
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS----DDRFEVIYEVLMGLVCFRL 425 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~g~~l~~~~~~~~v~f~~ 425 (561)
+ .+-....+...+++..+....-+++.++..++.+++++.|++ .|.+.... .....+.|.
T Consensus 276 ---~-----------~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~- 339 (395)
T 3nx3_A 276 ---G-----------STYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRK-GLGFMQGLS- 339 (395)
T ss_dssp ---S-----------SCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE-EETTEEEEE-
T ss_pred ---C-----------CCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-eEEEEEEEE-
Confidence 0 000123334444444333211234556666666666666654 34333221 122232222
Q ss_pred ccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHH
Q psy9807 426 KHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKR 505 (561)
Q Consensus 426 ~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~ 505 (561)
+... ....++.+.
T Consensus 340 ------------------------------------------------------------------~~~~-~~~~~~~~~ 352 (395)
T 3nx3_A 340 ------------------------------------------------------------------LDKS-VKVAKVIQK 352 (395)
T ss_dssp ------------------------------------------------------------------ECTT-SCHHHHHHH
T ss_pred ------------------------------------------------------------------eCCc-chHHHHHHH
Confidence 2111 124577888
Q ss_pred HHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 506 INGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 506 L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
|.+.|..+... +..++|+++. ..++++|++++++.|+++.+
T Consensus 353 l~~~Gi~v~~~----~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 353 CQENALLLISC----GENDLRFLPP-LILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp HHHTTEECEEE----TTTEEEECCC-TTCCHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEecC----CCCEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 88888554332 3458999854 56688999999999988764
No 166
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.69 E-value=2.4e-15 Score=157.53 Aligned_cols=216 Identities=14% Similarity=0.047 Sum_probs=141.8
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 123 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 123 ~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
..|...++|+.+ ++++|.+ ..+++++|++|+..++. . .. + ++.+++.
T Consensus 65 ~~p~~~~l~~~l----a~~~g~~-----------~~i~~~sG~~ai~~~~~-l----~~------~-------gd~Vl~~ 111 (403)
T 3cog_A 65 GNPTRNCLEKAV----AALDGAK-----------YCLAFASGLAATVTITH-L----LK------A-------GDQIICM 111 (403)
T ss_dssp -CHHHHHHHHHH----HHHHTCS-----------EEEEESCHHHHHHHHHT-T----SC------T-------TCEEEEE
T ss_pred CCchHHHHHHHH----HHHhCCC-----------cEEEECCHHHHHHHHHH-H----hC------C-------CCEEEEe
Confidence 346666666655 5556664 24777788888766554 2 10 0 1234444
Q ss_pred ccc-chHHH----HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhh
Q psy9807 203 PAC-TELEV----VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQ 277 (561)
Q Consensus 203 ~s~-~s~~k----aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~ 277 (561)
... .+... .+...|.+++.+|.. |+++|+++|++ .+.+|+++..++.+|.+.|+++|+++|++
T Consensus 112 ~~~y~~~~~~~~~~~~~~G~~v~~v~~~----d~~~l~~~i~~--------~t~~v~~~~p~nptG~~~~l~~i~~la~~ 179 (403)
T 3cog_A 112 DDVYGGTNRYFRQVASEFGLKISFVDCS----KIKLLEAAITP--------ETKLVWIETPTNPTQKVIDIEGCAHIVHK 179 (403)
T ss_dssp SSCCHHHHHHHHHTGGGGTCEEEEECTT----SHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHHTS
T ss_pred CCCcchHHHHHHHHHHHcCCEEEEECCC----CHHHHHHhcCc--------CCeEEEEECCCCCCCeeeCHHHHHHHHHH
Confidence 444 33333 234568888888843 89999998876 57788889999999999999999999999
Q ss_pred cC-ceEEechhcccccccCccccccccCccccceeeecCCcccccccc--ceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 278 KD-VWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFD--CSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 278 ~~-~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
|| ++++||.+|+.+....| . . -.+|+++.++||++++|.+ +|+++.+++............+ +
T Consensus 180 ~g~~~livD~~~~~~~~~~~-~----~--~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~------g- 245 (403)
T 3cog_A 180 HGDIILVVDNTFMSPYFQRP-L----A--LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSL------G- 245 (403)
T ss_dssp SSCCEEEEECTTTCTTTCCT-T----T--TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHH------C-
T ss_pred cCCCEEEEECCCcccccCCc-c----c--cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhc------C-
Confidence 99 99999999987543222 1 1 1469999999999999987 4888886654433211100000 0
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
-....+..|+.++.+. .+..++++..+++..+.+.+++.|.++
T Consensus 246 ------------~~~~~~~~~~~~~~l~--~l~~r~~~~~~n~~~l~~~l~~~~~v~ 288 (403)
T 3cog_A 246 ------------AVPSPIDCYLCNRGLK--TLHVRMEKHFKNGMAVAQFLESNPWVE 288 (403)
T ss_dssp ------------CCCCHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred ------------CCCCHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 0112344555554432 355567777888888888888876543
No 167
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.69 E-value=1.9e-14 Score=151.43 Aligned_cols=310 Identities=14% Similarity=0.072 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHhc-CCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 130 LEVVMLDWLGKML-DLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 130 lE~~~~~~la~l~-g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
...++.+.+++++ |-+++ ..+||+|||+||..++..++... . .+++++.... .
T Consensus 85 ~~~~l~~~la~~~~~~~~~---------~v~~~~g~~~a~~~~~~~a~~~~--~-------------~~~vi~~~p~y~~ 140 (426)
T 1sff_A 85 PYLELCEIMNQKVPGDFAK---------KTLLVTTGSEAVENAVKIARAAT--K-------------RSGTIAFSGAYHG 140 (426)
T ss_dssp HHHHHHHHHHHHSSCSSCE---------EEEEESSHHHHHHHHHHHHHHHH--T-------------CCEEEEETTCCCC
T ss_pred HHHHHHHHHHHhCCccccc---------EEEEeCchHHHHHHHHHHHHHhh--C-------------CCeEEEECCCcCC
Confidence 4445566677777 41112 57999999999999888665321 0 1234444333 3
Q ss_pred hHHHHHHhccCC-------------eEEeeC-C-----CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC
Q psy9807 207 ELEVVMLDWLGK-------------MLDLPK-E-----FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC 267 (561)
Q Consensus 207 s~~kaa~~~g~~-------------v~~v~~-~-----~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp 267 (561)
+...++.+.+.+ ++.+|. . ++.+|+++|+++|++ .. .+..+.+|+++...+++|.+.|
T Consensus 141 ~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~--~~-~~~~~~~v~~~p~~~ntG~~~~ 217 (426)
T 1sff_A 141 RTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKN--DA-APEDIAAIVIEPVQGEGGFYAS 217 (426)
T ss_dssp SSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHH--TC-CGGGEEEEEECSBCTTTTSCBC
T ss_pred CchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHh--cc-CCCceEEEEEecccCCCCcccC
Confidence 344455554432 666776 3 134799999999864 21 1125667777665566998888
Q ss_pred ----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccC
Q psy9807 268 ----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVD 343 (561)
Q Consensus 268 ----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~ 343 (561)
+++|.++|++||+++++|++|++.....+.......++ .+|.+ +++|+++....+|+++.++ ..+ ..+...
T Consensus 218 ~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~di~--s~sK~~~~GlriG~~~~~~-~~~-~~l~~~ 292 (426)
T 1sff_A 218 SPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLT--TFAKSIAGGFPLAGVTGRA-EVM-DAVAPG 292 (426)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEE--EECGGGGTSSCCEEEEEEH-HHH-TTSCTT
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCC-CCCEE--EEcccccCCCceEEEEEcH-HHH-hhhccC
Confidence 99999999999999999999995322111110001121 24665 5679998533368888864 222 222110
Q ss_pred CCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecccccc
Q psy9807 344 PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS----DDRFEVIYEVLMG 419 (561)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~g~~l~~~~~~~ 419 (561)
.+ .. +. ..-.+....+..+++.+..+ ++.++..++.+++.+.+++ .+.+... ++..+
T Consensus 293 -~~------~~-------~~-~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~ 353 (426)
T 1sff_A 293 -GL------GG-------TY-AGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGA 353 (426)
T ss_dssp -SB------CC-------SS-SSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETT
T ss_pred -Cc------Cc-------CC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEE
Confidence 00 00 00 00011222333444444332 4566677778888887765 3333222 22344
Q ss_pred ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHH
Q psy9807 420 LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEIN 499 (561)
Q Consensus 420 ~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~ 499 (561)
.+.+++.+... . + .+.....
T Consensus 354 ~~~~~~~~~~~--~---------------------------------------------------------~-~~~~~~~ 373 (426)
T 1sff_A 354 MIAIELFEDGD--H---------------------------------------------------------N-KPDAKLT 373 (426)
T ss_dssp EEEEEEBGGGC--T---------------------------------------------------------T-SBCHHHH
T ss_pred EEEEEEecCcc--c---------------------------------------------------------c-CCChHHH
Confidence 44444321000 0 0 0111224
Q ss_pred HHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 500 EKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 500 ~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.++.+.|.+.|..+..+.. ...++|+++. ..+++++++++++.|+++.+++
T Consensus 374 ~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 374 AEIVARARDKGLILLSCGP--YYNVLRILVP-LTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp HHHHHHHHHTTEECEEEST--TSCEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEecCCC--CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 5688888888754433322 2458999865 4668899999999998876553
No 168
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.69 E-value=7.5e-15 Score=154.82 Aligned_cols=318 Identities=11% Similarity=-0.004 Sum_probs=186.5
Q ss_pred hhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc
Q psy9807 126 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC 205 (561)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~ 205 (561)
...++-+.+.+|+++..|.+........+....++|+|+++++..++.+..+. ++.+++....
T Consensus 79 G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~-----------------gd~Vlv~~p~ 141 (425)
T 2r2n_A 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINP-----------------GDNVLLDEPA 141 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCT-----------------TCEEEEESSC
T ss_pred CCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCC-----------------CCEEEEeCCC
Confidence 34578888999999988876310000000015789999999987776653210 2345555444
Q ss_pred -chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhh------cCCceEEEEE-ecCCCCCccccCHH---HHHH
Q psy9807 206 -TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDRE------MCSDLLQVVA-TLGTTNCCAFDCLE---EIGQ 273 (561)
Q Consensus 206 -~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~------~g~~p~~vv~-t~gtt~tG~idpl~---eI~~ 273 (561)
.+...+++..|.+++.+|. .+ .+|+++|++++++ ... .+..+.+|++ ....+.||.+-|.+ +|++
T Consensus 142 y~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~--~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 218 (425)
T 2r2n_A 142 YSGTLQSLHPLGCNIINVASDES-GIVPDSLRDILSR--WKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYE 218 (425)
T ss_dssp CHHHHHHHGGGTCEEEEECEETT-EECHHHHHHHHTT--SCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred cHHHHHHHHHcCCEEEEeCcCCC-CCCHHHHHHHHHh--hhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence 5666777888999999998 54 5999999999973 210 0123555544 57788899998765 9999
Q ss_pred HHhhcCceEEechhcccccccCccccccccCc--cccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGV--ELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHD 350 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi--~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~ 350 (561)
+|++||+++++|.+|+........... +..+ ...+.+..+++|+++ |. -+|.++.++. .+.........+
T Consensus 219 ~a~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~-l~~~l~~~~~~~---- 291 (425)
T 2r2n_A 219 LARKYDFLIIEDDPYYFLQFNKFRVPT-FLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKP-LIERVILHIQVS---- 291 (425)
T ss_dssp HHHHTTCEEEEECTTGGGBSSSSCCCC-TGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHH-HHHHHHHHHHTT----
T ss_pred HHHHcCCEEEEECCcccccCCCCCCCC-ccccCCCCCEEEEccchhhcc-CccceEEEecCHH-HHHHHHHHHHHh----
Confidence 999999999999999854321111111 1112 122577889999997 42 3688877542 222211100000
Q ss_pred CCCCCCCCCcccccCcCCcchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHHhc-CCCeE-Eeccccccceeee
Q psy9807 351 QQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGV----KYLQEYIRKQISLAKEFEQLVRS-DDRFE-VIYEVLMGLVCFR 424 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~----~g~~~~~~~~~~la~~l~~~l~~-~~g~~-l~~~~~~~~v~f~ 424 (561)
.+ ..-.+....+..+++.++. +.++++.++..+..+++.+.|++ .|++. +..+.....+.++
T Consensus 292 ---------~~---~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~ 359 (425)
T 2r2n_A 292 ---------TL---HPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK 359 (425)
T ss_dssp ---------TC---SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEE
T ss_pred ---------cC---CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEE
Confidence 00 0001111222233333322 33555666777788888888887 67764 3333333333332
Q ss_pred cccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHH-HH
Q psy9807 425 LKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEK-LL 503 (561)
Q Consensus 425 ~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~-l~ 503 (561)
+.+ ..+ ..+ +.
T Consensus 360 ~~~------------------------------------------------------------------~~~--~~~~~~ 371 (425)
T 2r2n_A 360 VKG------------------------------------------------------------------IND--VKELIE 371 (425)
T ss_dssp ETT------------------------------------------------------------------CSC--CHHHHH
T ss_pred eCC------------------------------------------------------------------CCC--HHHHHH
Confidence 211 001 123 46
Q ss_pred HHHHhCCcEEEEeeeE-----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 504 KRINGNGKIHLVPSKI-----RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 504 ~~L~~~g~~~~~~~~~-----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+.|.+.|..+..+... .+..++|++++. .++++++++++.|.++.++
T Consensus 372 ~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 372 EKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS--ASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp THHHHTTEECEEGGGGSSSTTSCCCEEEEECSS--CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC--CCHHHHHHHHHHHHHHHHH
Confidence 6777777555433222 134689999763 4888999999999887654
No 169
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.68 E-value=1.8e-14 Score=152.03 Aligned_cols=299 Identities=11% Similarity=-0.003 Sum_probs=173.0
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TEL 208 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~ 208 (561)
..++.+.+++.++.+.+ ..+||+|||+||..++.+++.....+ +.+ ++++++.... .+.
T Consensus 88 ~~~l~~~la~~~~~~~~---------~v~~~~ggtea~~~ai~~~~~~~~~~---g~~-------~~~vi~~~~~yh~~~ 148 (429)
T 1s0a_A 88 AIELCRKLVAMTPQPLE---------CVFLADSGSVAVEVAMKMALQYWQAK---GEA-------RQRFLTFRNGYHGDT 148 (429)
T ss_dssp HHHHHHHHHHHSCTTCC---------EEEEESSHHHHHHHHHHHHHHHHHHH---TCC-------CCEEEEETTCCCCSS
T ss_pred HHHHHHHHHHhCCCCCC---------EEEEeCCHHHHHHHHHHHHHHHhccc---CCC-------CCeEEEECCCCCCCc
Confidence 34455667888876543 67999999999999988776421100 001 1245555433 222
Q ss_pred HHHHHhcc-------------CCeEEeeCC-------CCccChhhHHHHHhhhchhhcCCceEEEEEecC-CCCCccccC
Q psy9807 209 EVVMLDWL-------------GKMLDLPKE-------FLACSGGKGGGVIQRKSDREMCSDLLQVVATLG-TTNCCAFDC 267 (561)
Q Consensus 209 ~kaa~~~g-------------~~v~~v~~~-------~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g-tt~tG~idp 267 (561)
..++.+.+ ..+..++.+ .+.+|+++|+++|++ . +..+.+|+++.. .+.+|.+.|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~---~~~~~~vi~~p~~~n~tG~~~~ 223 (429)
T 1s0a_A 149 FGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAA--H---RHEIAAVIIEPIVQGAGGMRMY 223 (429)
T ss_dssp HHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHH--H---TTTEEEEEECSSEECTTTCEEB
T ss_pred hhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHh--C---CCCEEEEEEeecccCCCCcccC
Confidence 22222221 135566652 246999999999974 2 114567777766 677998777
Q ss_pred ----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhcc
Q psy9807 268 ----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNV 342 (561)
Q Consensus 268 ----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~ 342 (561)
+++|+++|++||+++|+|++|++.............++ ..|.+++ .|+++.+ .+.|+++.++ +.+. .+..
T Consensus 224 ~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~-~~d~~t~--sK~l~~G~~~iG~~~~~~-~~~~-~l~~ 298 (429)
T 1s0a_A 224 HPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILCL--GKALTGGTMTLSATLTTR-EVAE-TISN 298 (429)
T ss_dssp CTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTSSSCCEEEEECH-HHHH-HHHT
T ss_pred CHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCC-CCCEEEe--cccccCCCccceEEEeCH-HHHH-Hhhc
Confidence 99999999999999999999975322111110001122 3477754 5999877 7889988754 3332 2321
Q ss_pred C--CCccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEec
Q psy9807 343 D--PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD---DRFEVIY 414 (561)
Q Consensus 343 ~--~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~g~~l~~ 414 (561)
. ..+.. ..+-....+... .+++.+.. +++.++..++.+++.+.|+++ |++..+.
T Consensus 299 ~~~~~~~~---------------~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~ 360 (429)
T 1s0a_A 299 GEAGCFMH---------------GPTFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPARDAEMVADVR 360 (429)
T ss_dssp STTSSCSC---------------CCTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEE
T ss_pred CCCccccc---------------CCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 1 00000 001111223332 33333322 245677777888999998875 4443222
Q ss_pred cccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC
Q psy9807 415 EVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG 494 (561)
Q Consensus 415 ~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~ 494 (561)
+ ..+++.|++. .
T Consensus 361 ~-~g~~~~~~~~-------------------------------------------------------------------~ 372 (429)
T 1s0a_A 361 V-LGAIGVVETT-------------------------------------------------------------------H 372 (429)
T ss_dssp E-ETTEEEEEES-------------------------------------------------------------------S
T ss_pred E-eeEEEEEEEC-------------------------------------------------------------------C
Confidence 1 2223333221 1
Q ss_pred CcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 495 PNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 495 ~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
. ....++.+.|.+.|. .+.+. + .++|+++. ..++++|+++++++|+++.+
T Consensus 373 ~-~~~~~l~~~l~~~Gi-~v~~~---~-~~iRis~~-~~~t~e~i~~~~~~l~~~~~ 422 (429)
T 1s0a_A 373 P-VNMAALQKFFVEQGV-WIRPF---G-KLIYLMPP-YIILPQQLQRLTAAVNRAVQ 422 (429)
T ss_dssp C-BCHHHHHHHHHHTTE-ECCCB---T-TEEEECCC-TTCCHHHHHHHHHHHHHHTS
T ss_pred c-ccHHHHHHHHHHCCC-EEecc---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 0 013467788887764 44332 2 48999854 46688999999999988754
No 170
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.68 E-value=5.6e-15 Score=155.21 Aligned_cols=326 Identities=9% Similarity=-0.036 Sum_probs=191.1
Q ss_pred HHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q psy9807 106 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 185 (561)
Q Consensus 106 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~ 185 (561)
+.+.+....+.....|...+...++.+.+.+|+.+..+.+.. ...++|+|||+|+..++.+..+
T Consensus 61 v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~--------~~i~~t~g~~~al~~~~~~l~~-------- 124 (418)
T 3rq1_A 61 VKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGH--------IRSIATAGGTGGIHHLIHNYTE-------- 124 (418)
T ss_dssp HHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE--------EEEEEESHHHHHHHHHHHHHSC--------
T ss_pred HHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCcccc--------ccEEECCchHHHHHHHHHHhcC--------
Confidence 344444444333334444445678999999998877654311 1578999999999877765321
Q ss_pred cCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecC-CCC
Q psy9807 186 AHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLG-TTN 261 (561)
Q Consensus 186 ~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g-tt~ 261 (561)
+ ++.+++.... .+...++...|.+++.+|. +++.+|+++|++++.+ ..... ...+++.+.. .+.
T Consensus 125 --~-------gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~--~~~~~-~~~~vi~~~p~~NP 192 (418)
T 3rq1_A 125 --P-------GDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNE--LAAKQ-TNVVVIFNTPGNNP 192 (418)
T ss_dssp --T-------TCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHH--HHHHC-SEEEEEEECSSCTT
T ss_pred --C-------CCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHH--hhccC-CCEEEEEeCCCCCC
Confidence 0 2345555545 6667778889999999998 4569999999999975 32111 2335666655 789
Q ss_pred CccccCHHHHHH---HHh------hcCceEEechhcccccccCccccccccCcc--ccc---eeeecCCcccccc-ccce
Q psy9807 262 CCAFDCLEEIGQ---VCR------QKDVWLHVDAAYAGSAFICPENRYLMKGVE--LAD---SFNFNPHKWMLVT-FDCS 326 (561)
Q Consensus 262 tG~idpl~eI~~---ia~------~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~--~aD---si~~~~HK~l~~P-~g~g 326 (561)
||.+-|.+++.+ +|+ +||+++++|.+|.+................ ..| .++.++||.++.| ...|
T Consensus 193 tG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G 272 (418)
T 3rq1_A 193 TGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVG 272 (418)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCE
T ss_pred CCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcce
Confidence 999988666555 555 899999999999754321111111111111 113 5667999999755 3467
Q ss_pred eEEe--cChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhH--------HHHHHHHHHHHHH
Q psy9807 327 AMWL--KDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGV--------KYLQEYIRKQISL 396 (561)
Q Consensus 327 ~l~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~--------~g~~~~~~~~~~l 396 (561)
.++. +++..... +.....+..... .-....+...+....+.. +..+++.++..+.
T Consensus 273 ~~~~~~~~~~~~~~-~~~~~~~~~~~~--------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 337 (418)
T 3rq1_A 273 AMIGISDDEEIADE-FFEVNKSTSRAT--------------WSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDR 337 (418)
T ss_dssp EEEEEESSHHHHHH-HHHHHHHHHHHH--------------TSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHH-HHHHHHHHHhhc--------------cCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6665 34443332 211001100000 000122333333333321 2233555667778
Q ss_pred HHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCch
Q psy9807 397 AKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR 476 (561)
Q Consensus 397 a~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~ 476 (561)
.+++.+.|+++ |+++..+ ..+.+.|
T Consensus 338 ~~~l~~~L~~~-g~~~~~~-~~~~~~~----------------------------------------------------- 362 (418)
T 3rq1_A 338 ADIFKQEAAQV-GLPMLPY-RGGFFIT----------------------------------------------------- 362 (418)
T ss_dssp HHHHHHHHHHH-TCCCCCC-CSSSEEE-----------------------------------------------------
T ss_pred HHHHHHHHHhc-CCCCCCC-CceEEEE-----------------------------------------------------
Confidence 88888888877 7766533 3333222
Q ss_pred hhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 477 FEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 477 ~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+... ...++.+.|.+.|.....+ ..++|++++ ..++++++++++.|.++.+++
T Consensus 363 -------------~~~~----~~~~~~~~l~~~gi~v~~g-----~~~iRis~~--~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 363 -------------IPTD----SANAICEELKKEHIYVIAL-----ANGIRIAAC--GIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp -------------EECT----THHHHHHHHHHTTEECEEC-----SSEEEEEGG--GSCHHHHTTHHHHHHHHHHHT
T ss_pred -------------cCCC----CHHHHHHHHHhCCEEEecC-----CCCeEEEEe--cCCHHHHHHHHHHHHHHHHHH
Confidence 0110 1346677787777544332 347999965 347889999999998887653
No 171
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.68 E-value=5.8e-15 Score=154.28 Aligned_cols=299 Identities=12% Similarity=0.061 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
....++.+++++++|.+ ..+||+|||+||..++.+++.....+ +.+ ..+++++.... .
T Consensus 81 ~~~~~l~~~la~~~~~~-----------~v~~~~gg~~a~~~al~~~~~~~~~~---~~~------g~~~vi~~~~~y~~ 140 (406)
T 4adb_A 81 EPVLRLAKKLIDATFAD-----------RVFFCNSGAEANEAALKLARKFAHDR---YGS------HKSGIVAFKNAFHG 140 (406)
T ss_dssp HHHHHHHHHHHHHSSCS-----------EEEEESSHHHHHHHHHHHHHHHHHHH---TCT------TCCEEEEETTCCCC
T ss_pred HHHHHHHHHHHhhCCCC-----------eEEEeCcHHHHHHHHHHHHHHHHHhc---CCC------CCcEEEEECCCcCC
Confidence 34566777889888764 46999999999999998876532211 000 01244444443 2
Q ss_pred hHHHHHHhcc------------CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCc-----cccCHH
Q psy9807 207 ELEVVMLDWL------------GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC-----AFDCLE 269 (561)
Q Consensus 207 s~~kaa~~~g------------~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG-----~idpl~ 269 (561)
+...+...++ ..+..+| ..|+++|++++.+ .+.+|+++ ..+.+| ..++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~l~~--------~~~~v~~~-p~np~g~~~~~~~~~l~ 207 (406)
T 4adb_A 141 RTLFTVSAGGQPAYSQDFAPLPADIRHAA----YNDINSASALIDD--------STCAVIVE-PIQGEGGVVPASNAFLQ 207 (406)
T ss_dssp SSHHHHHHSSCGGGTGGGCSCCSSEEEEC----TTCHHHHHTTCST--------TEEEEEEC-SEETTTTSEECCHHHHH
T ss_pred CcHHHhhccCCccccccCCCCCCCceEeC----CCcHHHHHHHhcC--------CeEEEEEe-CCcCCCCCccCCHHHHH
Confidence 3333334443 2344444 3589999998865 56777777 445554 446899
Q ss_pred HHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCcccc
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
+|+++|++||+++++|++|++.............++ ..|.+++ ||+++.....|+++.++ .... .+... ..
T Consensus 208 ~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~r~G~~~~~~-~~~~-~~~~~---~~- 278 (406)
T 4adb_A 208 GLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDLLTT--AKALGGGFPVGALLATE-ECAR-VMTVG---TH- 278 (406)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECH-HHHH-TCCTT---SS-
T ss_pred HHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCC-CCCEEEe--chhhcCCCCeEEEEEcH-HHHh-hhccC---Cc-
Confidence 999999999999999999985322221111111122 2477755 99999444588877643 3322 12110 00
Q ss_pred CCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEecc--ccccceeeecc
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR-FEVIYE--VLMGLVCFRLK 426 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g-~~l~~~--~~~~~v~f~~~ 426 (561)
+ .+-....+...+++..+.....+++.++..++++++.+.|++... +.+... .....+.|
T Consensus 279 ---~-----------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~--- 341 (406)
T 4adb_A 279 ---G-----------TTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGC--- 341 (406)
T ss_dssp ---C-----------CSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEE---
T ss_pred ---C-----------CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEE---
Confidence 0 000112333333333332211256777788888888888876411 111111 11122222
Q ss_pred cCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCC-cHHHHHHHHH
Q psy9807 427 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGP-NEINEKLLKR 505 (561)
Q Consensus 427 ~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~-~~~~~~l~~~ 505 (561)
.+... .....++.+.
T Consensus 342 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 357 (406)
T 4adb_A 342 ----------------------------------------------------------------VLNADYAGQAKQISQE 357 (406)
T ss_dssp ----------------------------------------------------------------EECTTTTTCHHHHHHH
T ss_pred ----------------------------------------------------------------EEeCCcHHHHHHHHHH
Confidence 22111 0124578888
Q ss_pred HHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 506 INGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 506 L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
|.+.|..+ .+ .+..++|+++. ..++++|++++++.|+++.+++.+
T Consensus 358 l~~~gi~v-~~---~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 358 AAKAGVMV-LI---AGGNVVRFAPA-LNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp HHHTTEEC-EE---SSTTEEEECCC-TTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHCCcEE-ee---cCCCeEEEECC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 88887543 33 23568999744 567889999999999998877643
No 172
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.68 E-value=6e-15 Score=153.66 Aligned_cols=301 Identities=8% Similarity=-0.045 Sum_probs=171.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccc-cccccccChhhHHHHHHHHHHHHHhcCCCcc
Q psy9807 69 WQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIAC-IGFTWIASPACTELEVVMLDWLGKMLDLPKE 147 (561)
Q Consensus 69 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~ 147 (561)
.-.+.+.+.+.-.++..+.....|++....++.++.+...+....++. ....|...+...++.+.+.+|+.+..+.+-+
T Consensus 13 ~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~ 92 (397)
T 3fsl_A 13 ILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLK 92 (397)
T ss_dssp HHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccc
Confidence 344444454433333333333434433333344455554443304433 3334544455678888888888765442101
Q ss_pred ccccCCCCC--CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC
Q psy9807 148 FLACSGGKG--GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK 224 (561)
Q Consensus 148 ~~~~~~~~~--~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~ 224 (561)
.. ..++|+|||+|+..++...... . + ++++++.... .+...++...|.+++.+|.
T Consensus 93 -------~~~~~i~~t~g~~~a~~~~~~~~~~~--~------~-------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 150 (397)
T 3fsl_A 93 -------QQRVATIQTLGGSGALKVGADFLKRY--F------P-------ESGVWVSDPTWENHVAIFAGAGFEVSTYPW 150 (397)
T ss_dssp -------TTCEEEEEESHHHHHHHHHHHHHHHH--C------T-------TCCEEEESSCCHHHHHHHHHTTCCEEEECC
T ss_pred -------ccceEEEEcCCcHHHHHHHHHHHHhc--C------C-------CCeEEEeCCCchhHHHHHHHcCCceEEEee
Confidence 02 4689999999987775332111 0 0 2345555544 6667777888999999998
Q ss_pred ---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHHHHHhhcCceEEechhcccccccC-cc
Q psy9807 225 ---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFIC-PE 297 (561)
Q Consensus 225 ---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~-~~ 297 (561)
+++.+|+++|++++++ . ...+.+++.+...+.||.+ +++++|+++|++||+++++|.+|+....-. ..
T Consensus 151 ~~~~~~~~d~~~l~~~l~~--~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (397)
T 3fsl_A 151 YDEATNGVRFNDLLATLKT--L---QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEED 225 (397)
T ss_dssp EETTTTEECHHHHHHHHTT--C---CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGG
T ss_pred eeccCCcCcHHHHHHHHHh--C---CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccc
Confidence 5789999999999975 2 1245678888888899988 567799999999999999999997544321 01
Q ss_pred cccc--ccCccccceeeecCCcccccc-ccceeEEe--cChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchH
Q psy9807 298 NRYL--MKGVELADSFNFNPHKWMLVT-FDCSAMWL--KDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSL 372 (561)
Q Consensus 298 ~~~~--~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al 372 (561)
.... +.+...-..+..+++|.++.| ..+|.+++ .+...+.........+..... ...-.+...
T Consensus 226 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 293 (397)
T 3fsl_A 226 AYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNY------------SSPPNFGAQ 293 (397)
T ss_dssp GHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTT------------SSCCSHHHH
T ss_pred cHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhcc------------CCCCHHHHH
Confidence 1111 111112257778999998744 34677764 344333222111000000000 000001111
Q ss_pred HHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 373 KLWFVLRLL-----GVKYLQEYIRKQISLAKEFEQLVRSDD 408 (561)
Q Consensus 373 ~lw~~l~~~-----g~~g~~~~~~~~~~la~~l~~~l~~~~ 408 (561)
.+...+..- ..+.++++.++..++.+++.+.|++.+
T Consensus 294 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 334 (397)
T 3fsl_A 294 VVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEM 334 (397)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 111111111 145677788888899999999998864
No 173
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.67 E-value=9.8e-15 Score=154.48 Aligned_cols=310 Identities=11% Similarity=-0.068 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHhcCCCc-cccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 128 TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~-~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
.++..++.+++++.++... + ..+||+|||+||..++.+++.... .+++++....
T Consensus 85 ~~~~~~l~~~la~~~~~~~~~---------~v~~~~ggsea~~~al~~~~~~~~---------------~~~vi~~~~~y 140 (439)
T 3dxv_A 85 NAPAVTLAERLLASFPGEGTH---------KIWFGHSGSDANEAAYRAIVKATG---------------RSGVIAFAGAY 140 (439)
T ss_dssp EHHHHHHHHHHHHTTTCTTTE---------EEEEESSHHHHHHHHHHHHHHHHS---------------CCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhCCCCCCC---------EEEEeCCHHHHHHHHHHHHHHHhC---------------CCEEEEECCCC
Confidence 4567778889999885432 2 579999999999999988764320 1244444333
Q ss_pred -chHHHHHHhccCC--------------eEEeeC-CCCcc-----ChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcc
Q psy9807 206 -TELEVVMLDWLGK--------------MLDLPK-EFLAC-----SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCA 264 (561)
Q Consensus 206 -~s~~kaa~~~g~~--------------v~~v~~-~~g~~-----d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~ 264 (561)
.+...++.+.+.. +..+|. ..+.. |+++|+++|++ . ....+.+|++....+++|.
T Consensus 141 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~--~~~~~~~vi~~p~~~~~G~ 216 (439)
T 3dxv_A 141 HGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAA--V--PAGSIGAAFIEPIQSDGGL 216 (439)
T ss_dssp CCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHT--S--CTTCEEEEEECSSBSTTTS
T ss_pred CCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHh--c--CCCCEEEEEEccccCCCCC
Confidence 2333333333321 233444 22222 78999999942 1 1125678888888888999
Q ss_pred ccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhh
Q psy9807 265 FDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAF 340 (561)
Q Consensus 265 idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~ 340 (561)
+.| +++|+++|++||+++++|.+|++.............++ ..|.+ ++.|.++.-...|+++.++ ... ..+
T Consensus 217 ~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~di~--s~sK~~~~G~riG~~~~~~-~~~-~~~ 291 (439)
T 3dxv_A 217 IVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPDIL--VLGKGLGGGLPLSAVIAPA-EIL-DCA 291 (439)
T ss_dssp BCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCSEE--EECGGGGTTSCCEEEEEEH-HHH-TSC
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCCEE--EEcchhcCCcceEEEEECH-HHH-hhh
Confidence 988 99999999999999999999985322111011111122 24666 5679998644578777643 222 111
Q ss_pred ccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEeccc
Q psy9807 341 NVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS----DDRFEVIYEV 416 (561)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~g~~l~~~~ 416 (561)
... . ...+- ...+...+++..+....-++++++..++.+++++.|++ .|.+.... +
T Consensus 292 ~~~---~---------------~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~ 351 (439)
T 3dxv_A 292 SAF---A---------------MQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIR-G 351 (439)
T ss_dssp SSS---S---------------CCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE-E
T ss_pred cCC---C---------------cCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-E
Confidence 100 0 00011 23344444444433211145566666777777777765 34433322 2
Q ss_pred cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCc
Q psy9807 417 LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPN 496 (561)
Q Consensus 417 ~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~ 496 (561)
....+.|.+.+... . ..+..
T Consensus 352 ~g~~~~~~~~~~~~--~----------------------------------------------------------~~~~~ 371 (439)
T 3dxv_A 352 RGLACGMELVCDRQ--S----------------------------------------------------------REPAR 371 (439)
T ss_dssp ETTEEEEEEEEETT--T----------------------------------------------------------TEECH
T ss_pred EEEEEEEEEecCcc--c----------------------------------------------------------cCCCH
Confidence 23333333211000 0 00122
Q ss_pred HHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 497 EINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 497 ~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
....++.+.|.+.|..+... . ....++|+++. ...++++++++++.|+++.+++
T Consensus 372 ~~~~~~~~~l~~~Gv~v~~~-~-~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 372 AETAKLIYRAYQLGLVVYYV-G-MNGNVLEFTPP-LTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp HHHHHHHHHHHHHTEECEEE-S-TTSCEEEECCC-TTCCHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHCCcEEeec-C-CCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 33457788888887554333 2 22368999855 4668899999999999887765
No 174
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.67 E-value=1.3e-14 Score=153.90 Aligned_cols=302 Identities=10% Similarity=-0.085 Sum_probs=182.9
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|...+...++++.+.+|+. .|++-. ....+||+|+++++..+ .+. .. + ++.+
T Consensus 106 ~y~~~~g~~~lr~~ia~~~~--~g~~~~-------~~~i~~t~G~~~al~~~-~~l----~~------~-------gd~V 158 (449)
T 3qgu_A 106 GYGAEQGQGALREAVASTFY--GHAGRA-------ADEIFISDGSKCDIARI-QMM----FG------S-------KPTV 158 (449)
T ss_dssp CSTTTTCCHHHHHHHHHHHH--TTTTCC-------GGGEEEESCHHHHHHHH-HHH----HC------S-------SSCE
T ss_pred CCCCCCCcHHHHHHHHHHHH--cCCCCC-------HHHEEEccCHHHHHHHH-HHH----hC------C-------CCEE
Confidence 34444456788888888877 554321 12678999998887554 221 10 0 2345
Q ss_pred EEeccc-chHHHHHHhccCC----------eEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC
Q psy9807 200 IASPAC-TELEVVMLDWLGK----------MLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC 267 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~----------v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp 267 (561)
++.... .+...++...|.+ ++.+|. .++.++.+ +++ + . .+.+|+++...+.||.+-|
T Consensus 159 l~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-~--------~~~~v~l~~p~NPtG~~~~ 227 (449)
T 3qgu_A 159 AVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPD-LSK-A-K--------RTDIIFFCSPNNPTGAAAT 227 (449)
T ss_dssp EEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCC-GGG-C-C--------CCSEEEEESSCTTTCCCCC
T ss_pred EEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCC-hhH-c-C--------CCCEEEEeCCCCCCCCcCC
Confidence 555444 6777778888887 899998 43333332 111 0 1 3556777777888998865
Q ss_pred ---HHHHHHHHhhcCceEEechhcccccccCcccccccc---CccccceeeecCCccccc-cccceeEEecChhhHHH--
Q psy9807 268 ---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMK---GVELADSFNFNPHKWMLV-TFDCSAMWLKDPSWVVN-- 338 (561)
Q Consensus 268 ---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~---gi~~aDsi~~~~HK~l~~-P~g~g~l~~r~~~~l~~-- 338 (561)
+++|+++|++||+++++|.+|++...-. .....+. +....+.+..+++|+++. ...+|+++.++.. +..
T Consensus 228 ~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~-~~~~~ 305 (449)
T 3qgu_A 228 RAQLTELVNFARKNGSILVYDAAYALYISNP-DCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKAL-KYANG 305 (449)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTGGGCCCT-TSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTC-BCTTS
T ss_pred HHHHHHHHHHHHHCCcEEEEEcchHhhhcCC-CCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHH-Hhhhh
Confidence 8888899999999999999998643321 1111111 122347889999999973 3567888875431 110
Q ss_pred -----hhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 339 -----AFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL---GVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 339 -----~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
.+.....+ . .-....+...++...+ +.+.++++.++..++.+++.+.|++. ++
T Consensus 306 ~~~~~~~~~~~~~---------------~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 366 (449)
T 3qgu_A 306 EPVHADWNRVMTT---------------C---FNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GF 366 (449)
T ss_dssp CBHHHHHHHHHHH---------------S---CCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred hhHHHHHHHHhhc---------------c---cCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 00000000 0 0011233333344443 34567888889999999999999988 88
Q ss_pred EEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 411 EVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 411 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
++..+.....+.+.+.
T Consensus 367 ~~~~~~~~~~~~~~~~---------------------------------------------------------------- 382 (449)
T 3qgu_A 367 SVYGGDDAPYIWVGFP---------------------------------------------------------------- 382 (449)
T ss_dssp CEEESSSSSEEEEECT----------------------------------------------------------------
T ss_pred eeeCCCCeeEEEEECC----------------------------------------------------------------
Confidence 8775544444333221
Q ss_pred ecCCCcHHHHHHHHHHHhC-CcEEEEeee--ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRINGN-GKIHLVPSK--IRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
+....++.+.|.++ |.....+.. ..+..++|+++.+ ++++|+++++.|.++.++
T Consensus 383 -----~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~---~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 383 -----GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG---SRENILEAVRRFKEAYGK 439 (449)
T ss_dssp -----TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHHHC-
T ss_pred -----CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 11134677777776 644333222 2345689999543 788999999999887654
No 175
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.66 E-value=1.6e-14 Score=151.96 Aligned_cols=173 Identities=10% Similarity=0.008 Sum_probs=110.8
Q ss_pred HHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHH--HHHHHHHHHHHHHHHhcCCC----CCCcccccceEEeccc-c
Q psy9807 134 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATL--VALLGAKAKTMQRVKEAHPD----WKDSDIIANLIASPAC-T 206 (561)
Q Consensus 134 ~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl--~al~~ar~~~~~~~~~~~~~----~~~~~~~~~~vv~~s~-~ 206 (561)
+++.+++.++.+++ ..++|+|+|+++. .++.+.... .++ |.. .++.+++.... .
T Consensus 75 lr~~ia~~~~~~~~---------~i~~t~G~~~al~~~~~~~~l~~~--------~~g~~~~~~~--~gd~Vlv~~p~y~ 135 (423)
T 3ez1_A 75 ARALFAGYLDVKAE---------NVLVWNNSSLELQGLVLTFALLHG--------VRGSTGPWLS--QTPKMIVTVPGYD 135 (423)
T ss_dssp HHHHHHHHTTSCGG---------GEEECSSCHHHHHHHHHHHHHHTC--------CTTCSSCGGG--GCCEEEEEESCCH
T ss_pred HHHHHHHHhCCChh---------hEEEeCCcHHHHHHHHHHHHHhcc--------CCCccccccC--CCCEEEEcCCCcH
Confidence 33445666677654 6789999999885 444442210 000 000 01244444444 5
Q ss_pred hHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEe-cCCCCCccccCHH---HHHHHH-hhcCc
Q psy9807 207 ELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVAT-LGTTNCCAFDCLE---EIGQVC-RQKDV 280 (561)
Q Consensus 207 s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t-~gtt~tG~idpl~---eI~~ia-~~~~~ 280 (561)
....++...|.+++.+|. .+ .+|+++|+++|++ . ..+.+|+++ ...+.||.+-|.+ +|+++| ++||+
T Consensus 136 ~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~--~----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~ 208 (423)
T 3ez1_A 136 RHFLLLQTLGFELLTVDMQSD-GPDVDAVERLAGT--D----PSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDF 208 (423)
T ss_dssp HHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHHS--C----TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTC
T ss_pred HHHHHHHHcCCEEEeccCCCC-CCCHHHHHHHHhh--C----CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCC
Confidence 566677788999999999 55 4999999999952 1 146666544 6788899998877 888888 99999
Q ss_pred eEEechhcccccccC-c-----cccccc--cCccccceeeecCCccccccccceeEEecC
Q psy9807 281 WLHVDAAYAGSAFIC-P-----ENRYLM--KGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 281 ~lhVDaA~gg~~~~~-~-----~~~~~~--~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
++++|.+|+...+.. . ...... .+....+.+..+++|+++....+|+++..+
T Consensus 209 ~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~ 268 (423)
T 3ez1_A 209 TIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE 268 (423)
T ss_dssp EEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH
T ss_pred EEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH
Confidence 999999998432221 1 011110 011223678899999876667788777643
No 176
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.66 E-value=1.4e-14 Score=151.81 Aligned_cols=286 Identities=11% Similarity=-0.025 Sum_probs=163.8
Q ss_pred CCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCCh
Q psy9807 85 THWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTA 164 (561)
Q Consensus 85 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~gg 164 (561)
.+..+..+.+..+..+.++.+ .+.+....+.....|...+...++.+.+.+|+.+..+.... ...++|+||
T Consensus 40 i~l~~g~~~~~~~~~~~~~~v-~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~--------~~i~~t~g~ 110 (413)
T 3t18_A 40 INAALGTLLDDKGKIIALPSV-YDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGY--------ISAIATPGG 110 (413)
T ss_dssp EECCSCCCBCTTSCBCCCHHH-HHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE--------EEEEEESHH
T ss_pred EeccccCccCCCCCcCChHHH-HHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCcccc--------CcEEEcCcc
Confidence 344444444433333344443 34444433322334444455678888999998776653211 257999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC--CCCccChhhHHHHHhhh
Q psy9807 165 SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK--EFLACSGGKGGGVIQRK 241 (561)
Q Consensus 165 T~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~--~~g~~d~~~Le~~i~~~ 241 (561)
|+|+..++.+..+ + ++.+++.... .+...++...|.+++.+|. +++.+|+++|++++++
T Consensus 111 ~~al~~~~~~~~~----------~-------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~- 172 (413)
T 3t18_A 111 TGAIRSAIFSYLD----------E-------GDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDE- 172 (413)
T ss_dssp HHHHHHHHHHHCC----------S-------SCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHH-
T ss_pred HHHHHHHHHHhcC----------C-------CCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHH-
Confidence 9999877664311 0 2345544444 6666777888999999998 4569999999999975
Q ss_pred chhhcCCceEEEEEecC-CCCCccccCHHHHHH---HHh------hcCceEEechhcccccccCccccccccCccc--cc
Q psy9807 242 SDREMCSDLLQVVATLG-TTNCCAFDCLEEIGQ---VCR------QKDVWLHVDAAYAGSAFICPENRYLMKGVEL--AD 309 (561)
Q Consensus 242 ~~~~~g~~p~~vv~t~g-tt~tG~idpl~eI~~---ia~------~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~--aD 309 (561)
....+ ...+++++.. .+.||.+-|.+++.+ +|+ +||+++++|.+|++................. .|
T Consensus 173 -~~~~~-~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 250 (413)
T 3t18_A 173 -GIRDS-DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRN 250 (413)
T ss_dssp -HHHHC-SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTT
T ss_pred -HhhcC-CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCC
Confidence 32111 2335666655 788999988766665 555 8999999999997554322211121111111 12
Q ss_pred ---eeeecCCcccccc-ccceeEEec--ChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhH
Q psy9807 310 ---SFNFNPHKWMLVT-FDCSAMWLK--DPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGV 383 (561)
Q Consensus 310 ---si~~~~HK~l~~P-~g~g~l~~r--~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~ 383 (561)
.+..+++|.++.| ..+|.++.. +...... +.....+.... ..-....+...+....+..
T Consensus 251 ~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~-~~~~~~~~~~~--------------~~~~~~~~~~~a~~~~l~~ 315 (413)
T 3t18_A 251 LFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEE-FEASLAHSARC--------------NWSNGTHAAQNILIELERA 315 (413)
T ss_dssp EEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHH-HHHHHHHHHHH--------------HTSSCCHHHHHHHHHTTSH
T ss_pred eeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHH-HHHHHHHhhhc--------------cccCCChHHHHHHHHHhcC
Confidence 5667999999854 346777652 4433322 21100010000 0000122333333333322
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecc
Q psy9807 384 -------KYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE 415 (561)
Q Consensus 384 -------~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~ 415 (561)
+..+++.++..++.+++.+.|++. |+++..+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~ 353 (413)
T 3t18_A 316 ENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMIPY 353 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCccCC
Confidence 234455667778888888999887 7776543
No 177
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.66 E-value=6.3e-14 Score=147.84 Aligned_cols=324 Identities=12% Similarity=0.023 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
.+...++.+|+++.++.+.+ ..+||+|||+||..++.+++...... +.+ ..+++++.... +
T Consensus 71 ~~~~~~l~~~la~~~~~~~~---------~v~~~~gg~ea~~~al~~~~~~~~~~---g~~------~~~~vi~~~~~yh 132 (430)
T 3i4j_A 71 SDVLEEYAGRLARFVGLPTF---------RFWAVSGGSEATESAVKLARQYHVER---GEP------GRFKVITRVPSYH 132 (430)
T ss_dssp EHHHHHHHHHHHHHTTCTTC---------EEEEESSHHHHHHHHHHHHHHHHHHT---TCT------TCCEEEEETTC--
T ss_pred CHHHHHHHHHHHHhCCCCCC---------EEEEeCcHHHHHHHHHHHHHHHHHhc---CCC------CCcEEEEEeCCcC
Confidence 34566777888999886543 57999999999999999887653221 000 01234444433 2
Q ss_pred hHHH-HHHhccC--------------CeEEeeC-CC---CccChhhHHHHHhhhchhhcCCceEEEEEecCCC-CCcccc
Q psy9807 207 ELEV-VMLDWLG--------------KMLDLPK-EF---LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTT-NCCAFD 266 (561)
Q Consensus 207 s~~k-aa~~~g~--------------~v~~v~~-~~---g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt-~tG~id 266 (561)
.... +..+.+. .+..+|. +. +..|+++|+++|++ .. ...+.+|+++.... .+|.+.
T Consensus 133 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~--~~--~~~~~~vi~~p~~~~~~G~~~ 208 (430)
T 3i4j_A 133 GASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLER--EG--PETVAAFMAEPVVGASDAALA 208 (430)
T ss_dssp -----------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHH--HC--GGGEEEEEECSSCCGGGTTCC
T ss_pred CCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHh--cC--CCCEEEEEEcCcccCcCCccc
Confidence 1111 1122221 4445554 22 45688999999975 21 02566777777667 788887
Q ss_pred C----HHHHHHHHhhcCceEEechhcccccccCcccccccc-CccccceeeecCCcccccc-ccceeEEecChhhHHHhh
Q psy9807 267 C----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMK-GVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAF 340 (561)
Q Consensus 267 p----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~-gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~ 340 (561)
| +++|+++|++||+++++|.+|.+............. ++ ..|.+++ .|.++.- ...|.++. +++......
T Consensus 209 ~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~-~~di~t~--sK~l~~G~~r~G~~~~-~~~i~~~~~ 284 (430)
T 3i4j_A 209 PAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGV-TPDIAVL--GKGLAAGYAPLAGLLA-APQVYETVM 284 (430)
T ss_dssp CCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTC-CCSEEEE--CGGGTTTSSCCEEEEE-CHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCC-CCcEEEE--cccccCCccccEEEEE-CHHHHHHHh
Confidence 7 999999999999999999999864322211111111 22 2466654 5998853 34677776 444333221
Q ss_pred ccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEeccc
Q psy9807 341 NVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVR----SDDRFEVIYEV 416 (561)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~g~~l~~~~ 416 (561)
.....+... .+-....+...+++..+....-++++++..++.+++++.|+ +.|++..+.+
T Consensus 285 ~~~~~~~~~---------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 348 (430)
T 3i4j_A 285 GGSGAFMHG---------------FTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVRG- 348 (430)
T ss_dssp HTTCBCCCC---------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE-
T ss_pred ccCCccccc---------------CCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE-
Confidence 111111110 00012233333344333211113445555556666665554 4455544322
Q ss_pred cccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCc
Q psy9807 417 LMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPN 496 (561)
Q Consensus 417 ~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~ 496 (561)
....+.|.+.+.. .. -.| ...
T Consensus 349 ~g~~~~~~~~~~~---~~-----------------------------------------------------~~~---~~~ 369 (430)
T 3i4j_A 349 TGLLLGVVLGDLA---TG-----------------------------------------------------QAF---ETP 369 (430)
T ss_dssp ETTEEEEEEC----------------------------------------------------------------------
T ss_pred EEEEEEEEecccc---cc-----------------------------------------------------CCC---ccH
Confidence 2333333221100 00 000 001
Q ss_pred HHHHHHHHHHHhCCcEEEEe---eeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 497 EINEKLLKRINGNGKIHLVP---SKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 497 ~~~~~l~~~L~~~g~~~~~~---~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
....++.+.|.+.|.++... ....+..++|+++. ...++++++++++.|+++.+++
T Consensus 370 ~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 370 GIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPP-LSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp -CHHHHHHHHHHTTEECC-----------CEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 11356888888888554322 11123568999855 4568899999999999887654
No 178
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.66 E-value=8.7e-15 Score=154.15 Aligned_cols=298 Identities=17% Similarity=0.109 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
+...++.+++++++|.+ ..+||+|||+||..++.+++.....+ +.++ .+++++.... .
T Consensus 99 ~~~~~l~~~la~~~g~~-----------~v~~~~ggteA~~~al~~~~~~~~~~---~~~g------~~~vi~~~~~yh~ 158 (420)
T 2pb2_A 99 EPALRLGRKLIDATFAE-----------RVLFMNSGTEANETAFKLARHYACVR---HSPF------KTKIIAFHNAFHG 158 (420)
T ss_dssp HHHHHHHHHHHHHSSCS-----------EEEEESSHHHHHHHHHHHHHHHHHHH---TCTT------CCEEEEETTCCCC
T ss_pred HHHHHHHHHHHhhCCCC-----------eEEEeCCHHHHHHHHHHHHHHHhhhc---cCCC------CCEEEEEeCCcCC
Confidence 45566677778888742 46999999999999999887543211 0010 1244444333 3
Q ss_pred hHHHHHHhccCC------------eEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcc----ccCHHH
Q psy9807 207 ELEVVMLDWLGK------------MLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCA----FDCLEE 270 (561)
Q Consensus 207 s~~kaa~~~g~~------------v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~----idpl~e 270 (561)
+...++.+.+.. +..+| ..|+++|+++|.+ .+.+|+++...+.+|. .+++++
T Consensus 159 ~~~~~~~~~g~~~~~~~~~p~~~~~~~~~----~~d~~~le~~i~~--------~~~~vi~~p~~~~gG~~~~~~~~l~~ 226 (420)
T 2pb2_A 159 RSLFTVSVGGQPKYSDGFGPKPADIIHVP----FNDLHAVKAVMDD--------HTCAVVVEPIQGEGGVQAATPEFLKG 226 (420)
T ss_dssp SSHHHHHHSSCHHHHTTSSSCCSCEEEEC----TTCHHHHHHHCCT--------TEEEEEECSEETTTTSEECCHHHHHH
T ss_pred cCHHHHHhcCCccccccCCCCCCCeEEec----CCCHHHHHHHhcc--------CceEEEEeCCcCCCCeecCCHHHHHH
Confidence 333344444432 44555 2489999998866 5667777666555565 478999
Q ss_pred HHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCCCccccC
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDPLYLKHD 350 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~ 350 (561)
|.++|++||+++++|.+|.+.............++ ..|.++ ++|++++....|++++++. +...+.. .. .
T Consensus 227 l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~~diit--~sK~l~~G~~iG~~~~~~~--l~~~l~~--~~--~- 296 (420)
T 2pb2_A 227 LRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGV-TPDILT--SAKALGGGFPVSAMLTTQE--IASAFHV--GS--H- 296 (420)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEE--ECGGGGTTSCCEEEEECHH--HHTTCC---------
T ss_pred HHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCC-CCCeEE--ecccccCCCceEEEEEhHH--HHHhhcC--CC--c-
Confidence 99999999999999999975322111111001122 358775 5899996667899988653 2222211 00 0
Q ss_pred CCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEeccccccceeeecc
Q psy9807 351 QQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD----DRFEVIYEVLMGLVCFRLK 426 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~g~~l~~~~~~~~v~f~~~ 426 (561)
+. +. ..-.+.......+++.+.. +++.++..++.+++.+.|++. |.+... ++...++.|++.
T Consensus 297 --~~-------t~-~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~ 362 (420)
T 2pb2_A 297 --GS-------TY-GGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI-RGMGLLIGAELK 362 (420)
T ss_dssp --CC-------EE-CCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEEC
T ss_pred --Cc-------cc-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecceEEEEEEC
Confidence 00 00 0001122233334444433 356677778888888888764 322211 122333333221
Q ss_pred cCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHH
Q psy9807 427 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRI 506 (561)
Q Consensus 427 ~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L 506 (561)
+ +......++.+.|
T Consensus 363 ~------------------------------------------------------------------~~~~~~~~l~~~l 376 (420)
T 2pb2_A 363 P------------------------------------------------------------------KYKGRARDFLYAG 376 (420)
T ss_dssp G------------------------------------------------------------------GGTTCHHHHHHHH
T ss_pred C------------------------------------------------------------------CchHHHHHHHHHH
Confidence 1 0000134678888
Q ss_pred HhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 507 NGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 507 ~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.+.|.+ +.+. +..++|+++. ..++++|++++++.|+++.+++
T Consensus 377 ~~~Gi~-v~~~---~~~~iRl~~~-~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 377 AEAGVM-VLNA---GADVMRFAPS-LVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp HHTTEE-CEES---STTEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCE-EEeC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 887744 3332 2458999854 4678999999999999887664
No 179
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.66 E-value=3.1e-15 Score=159.38 Aligned_cols=158 Identities=11% Similarity=0.016 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chH
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TEL 208 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~ 208 (561)
.-+++.+|+++++|.+ ..++++|||+|+..++. ... + ++++++.... .+.
T Consensus 134 ~~~~l~~~la~~~g~~-----------~~i~~~sGt~al~~~l~-----~~~------~-------Gd~Vi~~~~~y~~~ 184 (464)
T 1ibj_A 134 TRDALESLLAKLDKAD-----------RAFCFTSGMAALSAVTH-----LIK------N-------GEEIVAGDDVYGGS 184 (464)
T ss_dssp HHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHT-----TSC------T-------TCEEEEESSCCHHH
T ss_pred HHHHHHHHHHHHhCCC-----------eEEEECCHHHHHHHHHH-----HhC------C-------CCEEEEECCCchhH
Confidence 5667788999999875 35888999988754432 110 0 2344444444 333
Q ss_pred HH----HHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEe
Q psy9807 209 EV----VMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHV 284 (561)
Q Consensus 209 ~k----aa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhV 284 (561)
.. .+...|.+++.+|. .|+++|+++|.+ .+.+|+++..++.+|.+.|+++|+++|++||+++++
T Consensus 185 ~~~~~~~~~~~G~~v~~v~~----~d~~~l~~~i~~--------~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~liv 252 (464)
T 1ibj_A 185 DRLLSQVVPRSGVVVKRVNT----TKLDEVAAAIGP--------QTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLV 252 (464)
T ss_dssp HHHHHHTSGGGTCEEEEECT----TSHHHHHHHCCS--------SEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHcCCEEEEeCC----CCHHHHHHHhcc--------CceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEE
Confidence 33 23556888888884 389999998866 578899999999999999999999999999999999
Q ss_pred chhcccccccCccccccccCccccceeeecCCccccccccc--eeEEecChhh
Q psy9807 285 DAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDC--SAMWLKDPSW 335 (561)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~--g~l~~r~~~~ 335 (561)
|++|+.+....+- . . .+|+++.++||++++|.|+ |++++++...
T Consensus 253 Dea~~~g~~~~~~-----~-~-~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l 298 (464)
T 1ibj_A 253 DNSIMSPVLSRPL-----E-L-GADIVMHSATKFIAGHSDVMAGVLAVKGEKL 298 (464)
T ss_dssp ECTTTCTTTCCGG-----G-T-TCSEEEEETTTTTTCSSCCCCEEEEECSHHH
T ss_pred ECCCcccccCChh-----h-c-CCEEEEECCcccccCCCCCcEEEEEEChHHH
Confidence 9999854332221 1 1 3599999999999998875 8888876443
No 180
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.66 E-value=4.5e-15 Score=155.19 Aligned_cols=220 Identities=13% Similarity=0.012 Sum_probs=146.3
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEE
Q psy9807 122 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIA 201 (561)
Q Consensus 122 ~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv 201 (561)
...|...++|+. ++++.|.+ ..++++||++|+..++..+ . + ++.+++
T Consensus 64 ~~~p~~~~l~~~----la~l~g~~-----------~~~~~~sG~~Ai~~~~~l~-----~------~-------gd~Vi~ 110 (400)
T 3nmy_A 64 THNPTRFAYERC----VAALEGGT-----------RAFAFASGMAATSTVMELL-----D------A-------GSHVVA 110 (400)
T ss_dssp TCCHHHHHHHHH----HHHHHTCS-----------EEEEESSHHHHHHHHHTTS-----C------T-------TCEEEE
T ss_pred CCCHHHHHHHHH----HHHHhCCC-----------CEEEecCHHHHHHHHHHHc-----C------C-------CCEEEE
Confidence 355666666665 56777765 3588889988876522111 0 0 123444
Q ss_pred ecccch-HHHH-----HHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHH
Q psy9807 202 SPACTE-LEVV-----MLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVC 275 (561)
Q Consensus 202 ~~s~~s-~~ka-----a~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia 275 (561)
....|. .... ....|.+++.++. .|+++|+++|++ .+.+|+++..++.+|.+.|+++|+++|
T Consensus 111 ~~~~y~~~~~~~~~~~~~~~g~~~~~v~~----~d~~~l~~~i~~--------~~~~v~~e~~~np~G~~~~l~~i~~la 178 (400)
T 3nmy_A 111 MDDLYGGTFRLFERVRRRTAGLDFSFVDL----TDPAAFKAAIRA--------DTKMVWIETPTNPMLKLVDIAAIAVIA 178 (400)
T ss_dssp ESSCCHHHHHHHHHTHHHHHCCEEEEECT----TSHHHHHHHCCT--------TEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred eCCCchHHHHHHHHhhHhhcCeEEEEECC----CCHHHHHHHhcc--------CCCEEEEECCCCCCCeeecHHHHHHHH
Confidence 333322 3333 2235788888884 389999999976 578888899999999999999999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc--cce-eEEecChhhHHHhhccCCCccccCCC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF--DCS-AMWLKDPSWVVNAFNVDPLYLKHDQQ 352 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~--g~g-~l~~r~~~~l~~~~~~~~~yl~~~~~ 352 (561)
++||++++||.+|+.+....|. .. .+|.++.++||++++|. -.| ++++++.......... ..+
T Consensus 179 ~~~g~~livDe~~~~~~~~~~~----~~---g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~-~~~------ 244 (400)
T 3nmy_A 179 RKHGLLTVVDNTFASPMLQRPL----SL---GADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFL-QNS------ 244 (400)
T ss_dssp HHTTCEEEEECTTTHHHHCCGG----GG---TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHH-HHH------
T ss_pred HHcCCEEEEECCCcccccCChh----hc---CCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHH-HHh------
Confidence 9999999999999855443321 11 35999999999999873 235 4555565433321110 000
Q ss_pred CCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 353 GSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 353 ~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
.+.....+..|..++. .+.+..++++..++++++.+.|++.|.++-+.
T Consensus 245 ------------~g~~~~~~~a~~~l~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~ 292 (400)
T 3nmy_A 245 ------------IGGVQGPFDSFLALRG--LKTLPLRMRAHCENALALAQWLETHPAIEKVI 292 (400)
T ss_dssp ------------HCCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred ------------cCCCCCHHHHHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEE
Confidence 0111244556666654 34467788899999999999999998876543
No 181
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.65 E-value=1.1e-14 Score=152.71 Aligned_cols=181 Identities=11% Similarity=-0.043 Sum_probs=110.8
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|...+...++.+.+.+|+.+.+|.+-+ ....+||+|||+|+..++.+.... +++ +...++
T Consensus 70 ~y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~t~al~~~~~~l~~~-------gd~-----~~~~~v 130 (417)
T 3g7q_A 70 NYDGPQGKTALLNALAVLLRETLGWDIE-------PQNIALTNGSQSAFFYLFNLFAGR-------RAD-----GSTKKV 130 (417)
T ss_dssp STTCTTSHHHHHHHHHHHHHHHHCCCCC-------GGGEEEESCHHHHHHHHHHHHSBC----------------CCBEE
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhCCCCC-------cccEEEeCCcHHHHHHHHHHHcCC-------Ccc-----CCcceE
Confidence 4555555678999999999888776422 126899999999998877664211 000 000133
Q ss_pred EEe-ccc-chHHHHHH----hccCC--eEEeeCC--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC--
Q psy9807 200 IAS-PAC-TELEVVML----DWLGK--MLDLPKE--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC-- 267 (561)
Q Consensus 200 vv~-~s~-~s~~kaa~----~~g~~--v~~v~~~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp-- 267 (561)
++. ... .....++. ..+.. +..++.+ ++.+|+++|+ +.+ .+.+|+.+..++.||.+-|
T Consensus 131 i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~--------~~~~v~~~~p~NptG~~~~~~ 200 (417)
T 3g7q_A 131 LFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IGE--------ETGMICVSRPTNPTGNVITDE 200 (417)
T ss_dssp EESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CCT--------TEEEEEEESSCTTTCCCCCHH
T ss_pred EEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--ccc--------CceEEEECCCCCCCCCccCHH
Confidence 332 223 22222221 12223 3334432 4578999988 544 4677888888899999988
Q ss_pred -HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEe
Q psy9807 268 -LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWL 330 (561)
Q Consensus 268 -l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~ 330 (561)
+++|+++|++||+++++|++|+.... ...+..........+.+..+++|++.....+|+++.
T Consensus 201 ~~~~l~~~a~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~ 263 (417)
T 3g7q_A 201 ELMKLDRLANQHNIPLVIDNAYGVPFP-GIIFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIA 263 (417)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTCTTTT-CCBCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEEC
T ss_pred HHHHHHHHHHHcCCEEEEeCCCccccc-cccccccccCCCCCEEEEEechhccCCCcceEEEEe
Confidence 99999999999999999999974211 001111111122347888999996444445776665
No 182
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.46 E-value=9.7e-18 Score=174.90 Aligned_cols=240 Identities=13% Similarity=0.034 Sum_probs=150.2
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
..++++.+.+|+++.+|.+.+ ....++|+|||+++..++.+.... ++++++....
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~-------~~~v~~~~g~~~a~~~~~~~~~~~-----------------gd~vl~~~p~~ 123 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFD-------KEDIVFVEGVVPAISIAIQAFTKE-----------------GEAVLINSPVY 123 (392)
Confidence 678999999999998885421 125789999999998777665321 1234443333
Q ss_pred chHHHHHHhccCCeEEeeC-C---CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhc
Q psy9807 206 TELEVVMLDWLGKMLDLPK-E---FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQK 278 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~-~---~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~ 278 (561)
.+...++...|.+++.+|. . ++.+|+++|++++++ . .+.+|+++...+.+|.+-| +++|+++|++|
T Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~ 196 (392)
T 3b1d_A 124 PPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE--N-----DVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKH 196 (392)
Confidence 5566666777888888887 2 245999999999873 1 3556666777888898855 99999999999
Q ss_pred CceEEechhcccccccCccccccc---cCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCC
Q psy9807 279 DVWLHVDAAYAGSAFICPENRYLM---KGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGS 354 (561)
Q Consensus 279 ~~~lhVDaA~gg~~~~~~~~~~~~---~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (561)
|+++++|.+|+............. ......+.+..+++|+++.| ..+|+++.+++............+-
T Consensus 197 ~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~------- 269 (392)
T 3b1d_A 197 HVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNN------- 269 (392)
Confidence 999999999986543211111111 11012357788999999744 4578777755433322111111110
Q ss_pred CCCCCcccccCcCCcchHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecc
Q psy9807 355 APDYRHWQIPLGRRFRSLKLWFVLRLL--GVKYLQEYIRKQISLAKEFEQLVRS-DDRFEVIYE 415 (561)
Q Consensus 355 ~~~~~~~~~~~sr~~~al~lw~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~g~~l~~~ 415 (561)
... ...+..+++...+ +.+.++++.++..++.+++.+.|++ .|++++..+
T Consensus 270 --------~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 322 (392)
T 3b1d_A 270 --------HHE---VSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKP 322 (392)
Confidence 000 0111111122222 3445677777888888889888887 677766543
No 183
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.65 E-value=2.2e-14 Score=151.28 Aligned_cols=179 Identities=11% Similarity=-0.003 Sum_probs=112.1
Q ss_pred hhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHH--HHHHHHHHHHHHHHHhcCC-CCCCcccccceEEe
Q psy9807 126 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATL--VALLGAKAKTMQRVKEAHP-DWKDSDIIANLIAS 202 (561)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl--~al~~ar~~~~~~~~~~~~-~~~~~~~~~~~vv~ 202 (561)
...++.+.+ ++.++.+++ ..++|+|+|+++. .++.+..+.. .+++ .|.. ..++.+++.
T Consensus 79 g~~~lr~~i----a~~~~~~~~---------~i~~t~G~~~al~~~~~~~~l~~~~-----~g~~~~~~~-~~gd~V~v~ 139 (427)
T 3ppl_A 79 GIVDIRQIW----ADLLGVPVE---------QVLAGDASSLNIMFDVISWSYIFGN-----NDSVQPWSK-EETVKWICP 139 (427)
T ss_dssp CCHHHHHHH----HHHHTSCGG---------GEEECSSCHHHHHHHHHHHHHHHCC-----TTCSSCGGG-SSCCEEEEE
T ss_pred CcHHHHHHH----HHHhCCCcc---------eEEEeCCcHHHHHHHHHHHHHhccC-----CcccccccC-CCCCEEEEc
Confidence 334555544 455577654 6789999999884 4443322100 0000 0000 001244444
Q ss_pred ccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEe-cCCCCCccccCHH---HHHHHH-
Q psy9807 203 PAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVAT-LGTTNCCAFDCLE---EIGQVC- 275 (561)
Q Consensus 203 ~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t-~gtt~tG~idpl~---eI~~ia- 275 (561)
... .+...+++..|.+++.+|. .++ +|+++|+++++. . .+.+|+++ ...+.||.+-|.+ +|+++|
T Consensus 140 ~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~--~-----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~ 211 (427)
T 3ppl_A 140 VPGYDRHFSITERFGFEMISVPMNEDG-PDMDAVEELVKN--P-----QVKGMWVVPVFSNPTGFTVTEDVAKRLSAMET 211 (427)
T ss_dssp ESCCHHHHHHHHHTTCEEEEEEEETTE-ECHHHHHHHTTS--T-----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCC
T ss_pred CCCcHHHHHHHHHcCCEEEEeCCCCCC-CCHHHHHHHHhc--C-----CCeEEEECCCCCCCCCccCCHHHHHHHHHHHh
Confidence 444 5666777888999999999 655 999999999853 1 45666654 7788999998877 888899
Q ss_pred hhcCceEEechhcccccccCcc-----ccccc--cCccccceeeecCCccccccccceeEEec
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPE-----NRYLM--KGVELADSFNFNPHKWMLVTFDCSAMWLK 331 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~-----~~~~~--~gi~~aDsi~~~~HK~l~~P~g~g~l~~r 331 (561)
++||+++++|.+|+...+.... ...+. .+....+.+..+++|+++....+|.++..
T Consensus 212 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~ 274 (427)
T 3ppl_A 212 AAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTS 274 (427)
T ss_dssp SSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECC
T ss_pred hcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcC
Confidence 9999999999999864322111 11110 01122367889999996655677776664
No 184
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.64 E-value=2.9e-14 Score=149.37 Aligned_cols=246 Identities=10% Similarity=-0.052 Sum_probs=149.0
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE--eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI--QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 197 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~--t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~ 197 (561)
.|...+...++.+.+.+|+....|.+-. ....+| |+|||+|+..++..++.. . .+. ....+
T Consensus 69 ~y~~~~g~~~lr~~la~~~~~~~~~~~~-------~~~v~~~~t~gg~~a~~~~~~~~~~~--~----~g~----~~~~d 131 (412)
T 1ajs_A 69 EYLPILGLAEFRTCASRLALGDDSPALQ-------EKRVGGVQSLGGTGALRIGAEFLARW--Y----NGT----NNKDT 131 (412)
T ss_dssp CCCCTTCCHHHHHHHHHHHHCTTCHHHH-------TTCEEEEEEEHHHHHHHHHHHHHHHH--S----SSS----SCCCS
T ss_pred CCCCCCCCHHHHHHHHHHHhcCCCCccC-------CCcEEEEECCCcHHHHHHHHHHHHHh--C----cCc----CCCCC
Confidence 3444445677888888887654443201 025788 999999998876443211 0 000 00003
Q ss_pred ceEEeccc-chHHHHHHhccCC-eEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHH
Q psy9807 198 NLIASPAC-TELEVVMLDWLGK-MLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLE 269 (561)
Q Consensus 198 ~~vv~~s~-~s~~kaa~~~g~~-v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~ 269 (561)
++++.... .+...++...|.+ ++.+|. +++.+|+++|++++.+ . +....+++.+...+.||.+ ++++
T Consensus 132 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~---~~~~~~v~~~~p~nptG~~~~~~~l~ 206 (412)
T 1ajs_A 132 PVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLEN--A---PEFSIFVLHACAHNPTGTDPTPEQWK 206 (412)
T ss_dssp CEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHH--S---CTTCEEEEESSSCTTTCCCCCHHHHH
T ss_pred eEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHh--C---CCCcEEEEECCCCCCCCCCCCHHHHH
Confidence 45555555 6677777888999 999998 5678999999999965 2 1135667778888889988 4567
Q ss_pred HHHHHHhhcCceEEechhcccccccC---c--cccccccCccccceeeecCCccccccc-cceeEEe--cChhhHHH---
Q psy9807 270 EIGQVCRQKDVWLHVDAAYAGSAFIC---P--ENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWL--KDPSWVVN--- 338 (561)
Q Consensus 270 eI~~ia~~~~~~lhVDaA~gg~~~~~---~--~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~--r~~~~l~~--- 338 (561)
+|+++|++||+++++|.+|.+..... + ..... .....-+.+..++||.++.|. .+|++++ +++..+..
T Consensus 207 ~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~ 285 (412)
T 1ajs_A 207 QIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF-VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLS 285 (412)
T ss_dssp HHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH-HHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH-hccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHH
Confidence 89999999999999999987543321 1 11111 111111377899999887532 2688887 24432211
Q ss_pred hhcc--CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh--------HHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 339 AFNV--DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG--------VKYLQEYIRKQISLAKEFEQLVRSDD 408 (561)
Q Consensus 339 ~~~~--~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g--------~~g~~~~~~~~~~la~~l~~~l~~~~ 408 (561)
.+.. ...|. . ...+..+++...+. .+.++++.++..++.+++.+.|++.+
T Consensus 286 ~~~~~~~~~~~-----------------~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 286 QMQKIVRVTWS-----------------N---PPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALK 345 (412)
T ss_dssp HHHHHHHTTTS-----------------S---CCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcccC-----------------C---CChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 1110 00110 0 01122222222221 23677788888899999999998863
No 185
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.64 E-value=1.1e-13 Score=146.44 Aligned_cols=298 Identities=11% Similarity=0.008 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
+...++.+.+++++|.+ ..+|++|||+||..|+.+++...... . +.. ...+++++.... .
T Consensus 107 ~~~~~l~~~la~~~g~~-----------~v~~~~sGseA~~~al~~a~~~~~~~---~--g~~--~gr~~vi~~~~~yhg 168 (433)
T 1z7d_A 107 VPLGICERYLTNLLGYD-----------KVLMMNTGAEANETAYKLCRKWGYEV---K--KIP--ENMAKIVVCKNNFSG 168 (433)
T ss_dssp HHHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHHHHHHHT---S--CCC--TTCCEEEEETTC---
T ss_pred HHHHHHHHHHHhhcCCC-----------eEEEeCCHHHHHHHHHHHHHHHhhhc---c--CCC--CCCCeEEEEeCCcCC
Confidence 34445555667766642 46999999999999999887532110 0 000 001244444433 2
Q ss_pred hHHHHHHhcc------------CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc----CHHH
Q psy9807 207 ELEVVMLDWL------------GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD----CLEE 270 (561)
Q Consensus 207 s~~kaa~~~g------------~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id----pl~e 270 (561)
+...++.+.+ ..+..+| ..|+++|+++|+. . .+.+|+++.....+|.+. ++++
T Consensus 169 ~~~~~~~~~g~~~~~~~~~p~~~~v~~~~----~~d~~~le~~l~~--~-----~~~~vi~ep~~~~~G~~~~~~~~l~~ 237 (433)
T 1z7d_A 169 RTLGCISASTTKKCTSNFGPFAPQFSKVP----YDDLEALEEELKD--P-----NVCAFIVEPIQGEAGVIVPSDNYLQG 237 (433)
T ss_dssp -----------------------CEEEEC----TTCHHHHHHHHTS--T-----TEEEEEECSSBSTTTSBCCCTTHHHH
T ss_pred cchhhhcccCCccccccCCCCCCCeEEeC----CCCHHHHHHHhCC--C-----CEEEEEEECCCCCCCccCCCHHHHHH
Confidence 2233333333 2445555 3489999999942 1 466777776666688765 8999
Q ss_pred HHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCcccc
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKH 349 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~ 349 (561)
|.++|++||+++++|.+|.+.......+.....++ ..|.+ +++|++++. ...|+++.++ +.. ..+.. ..
T Consensus 238 l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~--t~sK~l~~G~~~~G~v~~~~-~~~-~~l~~--~~--- 307 (433)
T 1z7d_A 238 VYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVI--LLGKALSGGHYPISAVLAND-DIM-LVIKP--GE--- 307 (433)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEE--EECGGGGTTSSCCEEEEECH-HHH-TTCCT--TC---
T ss_pred HHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCC-CCCEE--EECccccCCCCCeEEEEECH-HHH-hhhcc--cc---
Confidence 99999999999999999975322111111011122 35776 557999854 4588888754 322 22211 00
Q ss_pred CCCCCCCCCCcccccCcCCcchHHH---HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEec--cccccceee
Q psy9807 350 DQQGSAPDYRHWQIPLGRRFRSLKL---WFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD-DRFEVIY--EVLMGLVCF 423 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~sr~~~al~l---w~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~g~~l~~--~~~~~~v~f 423 (561)
. +. +. ....+.. ..+++.+.. +++.++..++.+++.+.|++. .++.++. +....++.+
T Consensus 308 -~-~~-------t~----~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i 371 (433)
T 1z7d_A 308 -H-GS-------TY----GGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAI 371 (433)
T ss_dssp -C-CC-------TT----TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEE
T ss_pred -c-cc-------cC----CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEE
Confidence 0 00 00 1122333 334443332 246677778888888888764 1222111 112223222
Q ss_pred ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHH
Q psy9807 424 RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLL 503 (561)
Q Consensus 424 ~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~ 503 (561)
.+ .+......++.
T Consensus 372 ~~-------------------------------------------------------------------~~~~~~~~~~~ 384 (433)
T 1z7d_A 372 EF-------------------------------------------------------------------KNELVNVLDIC 384 (433)
T ss_dssp EE-------------------------------------------------------------------CTTTCCHHHHH
T ss_pred EE-------------------------------------------------------------------ccChhHHHHHH
Confidence 22 11101134678
Q ss_pred HHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 504 KRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 504 ~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+.|.+.|.. +.+. +..++|+++. ..++++|+++++++|+++.+++
T Consensus 385 ~~l~~~Gv~-v~~~---~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 385 LKLKENGLI-TRDV---HDKTIRLTPP-LCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp HHHHHTTEE-CCEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCeE-EecC---CCCEEEEECC-cCCCHHHHHHHHHHHHHHHHHH
Confidence 888888744 3332 3458999854 5668899999999999887654
No 186
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.64 E-value=2.8e-14 Score=150.09 Aligned_cols=306 Identities=8% Similarity=-0.036 Sum_probs=171.7
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccc-cccccccChhhHHHHHHHHHHHHHhcCCCc
Q psy9807 68 TWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIAC-IGFTWIASPACTELEVVMLDWLGKMLDLPK 146 (561)
Q Consensus 68 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~~~~~la~l~g~~~ 146 (561)
.+-.+.+.+.+.-.++..+.....|+.....++.++.+.. .+...++. ....|.......++.+.+.+|+....+.+-
T Consensus 35 ~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~-a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 113 (420)
T 4f4e_A 35 PILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRD-AEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLI 113 (420)
T ss_dssp HHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHH-HHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHH-HHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCcccc
Confidence 3556655555432333333333333322222233344443 33333333 223444445557788888888866544210
Q ss_pred cccccCCCCC--CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEee
Q psy9807 147 EFLACSGGKG--GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLP 223 (561)
Q Consensus 147 ~~~~~~~~~~--~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~ 223 (561)
. .. ..++|+|||+|+..++..... .. + ++++++.... .+...+++..|.+++.+|
T Consensus 114 ~-------~~~~~i~~t~G~t~al~~~~~~~~~--~~------~-------gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~ 171 (420)
T 4f4e_A 114 A-------AGRVVTAQALGGTGALKIGADFLRT--LN------P-------KAKVAISDPSWENHRALFDMAGFEVVAYP 171 (420)
T ss_dssp H-------TTCEEEEEEEHHHHHHHHHHHHHHH--HC------T-------TCCEEEEESCCHHHHHHHHHTTCCEEEEE
T ss_pred c-------cCceEEEECCccHHHHHHHHHHHHH--hC------C-------CCEEEEeCCCcHhHHHHHHHcCCeEEEee
Confidence 1 02 468999999998877432211 10 0 2345555555 666777788899999999
Q ss_pred C---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHHHHHhhcCceEEechhcccccccCc-
Q psy9807 224 K---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICP- 296 (561)
Q Consensus 224 ~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~- 296 (561)
. +++.+|+++|++.|++ . ...+.+++.+...+.||.+ +++++|+++|++||+++++|.+|++...-.+
T Consensus 172 ~~~~~~~~~d~~~l~~~l~~--~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~ 246 (420)
T 4f4e_A 172 YYDAKTNGVNFDGMLAALNG--Y---EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEA 246 (420)
T ss_dssp CEETTTTEECHHHHHHHHTT--C---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTG
T ss_pred eeccccCccCHHHHHHHHHh--C---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcch
Confidence 8 4789999999999975 2 1246778888888999988 4577999999999999999999976443211
Q ss_pred ccccc--ccCccccceeeecCCcccccc-ccceeEEe--cChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcch
Q psy9807 297 ENRYL--MKGVELADSFNFNPHKWMLVT-FDCSAMWL--KDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRS 371 (561)
Q Consensus 297 ~~~~~--~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~a 371 (561)
..... +.+....+.+..+++|.++.| ..+|.+++ .+...+.........+..... ...-....
T Consensus 247 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 314 (420)
T 4f4e_A 247 DAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNY------------SNPPTHGG 314 (420)
T ss_dssp GGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTT------------SSCCSHHH
T ss_pred hhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhccc------------CCCCHHHH
Confidence 11111 111222367888999999743 34777764 344333221110000000000 00001111
Q ss_pred HHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEe
Q psy9807 372 LKLWFVLRLL-----GVKYLQEYIRKQISLAKEFEQLVRSD---DRFEVI 413 (561)
Q Consensus 372 l~lw~~l~~~-----g~~g~~~~~~~~~~la~~l~~~l~~~---~g~~l~ 413 (561)
..+...+... ..+.++++.++..++.+++.+.|++. +++++.
T Consensus 315 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 364 (420)
T 4f4e_A 315 AIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFI 364 (420)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeE
Confidence 1111112111 13456777888888999999999886 355443
No 187
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.64 E-value=3.4e-14 Score=149.99 Aligned_cols=300 Identities=11% Similarity=-0.019 Sum_probs=179.4
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
.|...+...++++.+.+|+.+-++.+++ ..+||+|+++++.. +... .. + ++.+
T Consensus 93 ~y~~~~g~~~l~~~ia~~~~~~~~~~~~---------~i~~t~G~~~al~~-l~~l----~~------~-------gd~V 145 (432)
T 3ei9_A 93 GYGAEQGAKPLRAAIAKTFYGGLGIGDD---------DVFVSDGAKCDISR-LQVM----FG------S-------NVTI 145 (432)
T ss_dssp CCCCTTCCHHHHHHHHHHHHTTTTCCGG---------GEEEESCHHHHHHH-HHHH----HC------T-------TCCE
T ss_pred CCCCCCCCHHHHHHHHHHHHccCCCCcc---------eEEECCChHHHHHH-HHHH----cC------C-------CCEE
Confidence 3444445688999999999875666544 67899998887643 2221 10 0 2345
Q ss_pred EEeccc-chHHHHHHhcc------------CCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc
Q psy9807 200 IASPAC-TELEVVMLDWL------------GKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF 265 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g------------~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i 265 (561)
++.... .++..+++..+ .+++.+|. ..+.++.+ |++ .. .+.+|+++...+.||.+
T Consensus 146 l~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~--~~--------~~~~v~l~~p~NPtG~~ 214 (432)
T 3ei9_A 146 AVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPD-LST--VG--------RTDIIFFCSPNNPTGAA 214 (432)
T ss_dssp EEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCC-GGG--CC--------CCSEEEEESSCTTTCCC
T ss_pred EEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCC-hhh--CC--------CCCEEEEeCCCCCCCCC
Confidence 555555 67777776655 36778887 33333222 222 11 35566667788889987
Q ss_pred c---CHHHHHHHHhhcCceEEechhcccccccCcccccc--ccCccccceeeecCCcccccc-ccceeEEecChhh----
Q psy9807 266 D---CLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL--MKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSW---- 335 (561)
Q Consensus 266 d---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~---- 335 (561)
- ++++|+++|++||+++++|.+|+..... ...... +.+....+.+..+++|+++.| ..+|+++.++...
T Consensus 215 ~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~ 293 (432)
T 3ei9_A 215 ATREQLTQLVEFAKKNGSIIVYDSAYAMYMSD-DNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDG 293 (432)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTGGGCCS-SCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTS
T ss_pred CCHHHHHHHHHHHHHcCcEEEEccchHhhccC-CCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcch
Confidence 5 5777778899999999999999864332 111111 112223468899999999743 4578877765421
Q ss_pred --HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 336 --VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLL---GVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 336 --l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
+...+.....+.. -....+...+++..+ +.+.++++.++..++.+++.+.|++. ++
T Consensus 294 ~~~~~~~~~~~~~~~------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 354 (432)
T 3ei9_A 294 FPVAKDFNRIICTCF------------------NGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GY 354 (432)
T ss_dssp CBHHHHHHHHHHHSC------------------CCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHhcccc------------------CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Cc
Confidence 0111110000000 001223333333333 34567888889999999999999988 88
Q ss_pred EEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 411 EVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 411 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
++..+.....+.+++.
T Consensus 355 ~~~~~~~~~~~~~~~~---------------------------------------------------------------- 370 (432)
T 3ei9_A 355 DVYGGKNAPYVWVHFP---------------------------------------------------------------- 370 (432)
T ss_dssp CEEECSSSSEEEEECT----------------------------------------------------------------
T ss_pred eecCCCcceEEEEECC----------------------------------------------------------------
Confidence 8775544444433221
Q ss_pred ecCCCcHHHHHHHHHHHhC-CcEEEEeee--ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRINGN-GKIHLVPSK--IRDVYFLRMAVCSRYSESSDMIYSWNEIKTL 549 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 549 (561)
+.+ ..++.+.|.++ |..+..+.. ..+..++|+++. +++++++++++.|++.
T Consensus 371 ---~~~--~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~---~~~e~l~~~l~rl~~~ 424 (432)
T 3ei9_A 371 ---NQS--SWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAF---GHRENILEACRRFKQL 424 (432)
T ss_dssp ---TSC--HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHH
T ss_pred ---CCC--HHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEec---CCHHHHHHHHHHHHHH
Confidence 111 34567777665 644433322 234568999964 3788999998888764
No 188
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.64 E-value=1.8e-14 Score=149.92 Aligned_cols=180 Identities=12% Similarity=-0.051 Sum_probs=119.4
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE--eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI--QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 197 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~--t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~ 197 (561)
.|...+...++.+.+.+|+... +.+++ ..+| |+|||+|+..++.+.+... + ++
T Consensus 64 ~y~~~~g~~~lr~~la~~~~~~-~~~~~---------~v~~~~~~g~~~a~~~~~~~~~~~~--------~-------gd 118 (394)
T 2ay1_A 64 TYAGLSGEPEFQKAMGELILGD-GLKSE---------TTATLATVGGTGALRQALELARMAN--------P-------DL 118 (394)
T ss_dssp CCCCSSCCHHHHHHHHHHHHGG-GCCGG---------GEEEEEEEHHHHHHHHHHHHHHHHC--------T-------TC
T ss_pred CCCCCCCcHHHHHHHHHHHhCC-CCCcc---------cEEEEecCCchhHHHHHHHHHHhcC--------C-------CC
Confidence 3434444577888888877432 22332 4677 9999999988876654310 0 23
Q ss_pred ceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHH
Q psy9807 198 NLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEE 270 (561)
Q Consensus 198 ~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~e 270 (561)
++++.... .+...++...|.+++.+|. +++.+|+++|++++++ . ...+.+++.+...+.||.+-| +++
T Consensus 119 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~---~~~~~~~~~~~~~nptG~~~~~~~l~~ 193 (394)
T 2ay1_A 119 RVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAA--A---KKGDMVLLHGCCHNPTGANLTLDQWAE 193 (394)
T ss_dssp CEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHT--C---CTTCEEEEESSSCTTTCCCCCHHHHHH
T ss_pred EEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHh--C---CCCCEEEEeCCCCCCCCCCCCHHHHHH
Confidence 45555444 6666777778999999998 5788999999999976 2 113456777888888998865 667
Q ss_pred HHHHHhhcCceEEechhcccccccC--c--cccccccCccccceeeecCCcccccc-ccceeEEe
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFIC--P--ENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWL 330 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~--~--~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~ 330 (561)
|+++|++||+++++|++|++...-. + .... +.....-..+..++||+++.| ..+|++++
T Consensus 194 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~riG~~~~ 257 (394)
T 2ay1_A 194 IASILEKTGALPLIDLAYQGFGDGLEEDAAGTRL-IASRIPEVLIAASCSKNFGIYRERTGCLLA 257 (394)
T ss_dssp HHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHH-HHHHCSSEEEEEECTTTTTCGGGCEEEEEE
T ss_pred HHHHHHHCCCEEEEecCccccccCcccchHHHHH-HhhcCCCEEEEEeccCCCcCcCCccceEEE
Confidence 8999999999999999998643210 0 0111 111111135577999999744 33688887
No 189
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.64 E-value=2.8e-14 Score=146.12 Aligned_cols=279 Identities=11% Similarity=-0.009 Sum_probs=176.8
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHH
Q psy9807 133 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVV 211 (561)
Q Consensus 133 ~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~ka 211 (561)
++.+++++++|.+++ ..++|+|||+++..++.+.. ++++++.... .+...+
T Consensus 54 ~lr~~la~~~~~~~~---------~i~~t~g~~~al~~~~~~l~-------------------gd~Vi~~~p~~~~~~~~ 105 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNN---------AILVTNGPTAAFYQIAQAFR-------------------GSRSLIAIPSFAEYEDA 105 (350)
T ss_dssp HHHHHHHHHTTCCGG---------GEEEESHHHHHHHHHHHHTT-------------------TCEEEEEESCCHHHHHH
T ss_pred HHHHHHHHHhCcCHH---------HEEEcCCHHHHHHHHHHHHC-------------------CCEEEEeCCCcHHHHHH
Confidence 466778888898764 67999999999877766532 1245554444 666777
Q ss_pred HHhccCCeEEeeC-CC-CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC-ceEEechhc
Q psy9807 212 MLDWLGKMLDLPK-EF-LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD-VWLHVDAAY 288 (561)
Q Consensus 212 a~~~g~~v~~v~~-~~-g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~-~~lhVDaA~ 288 (561)
++..|.+++.+|. +. +.+++ + .+.+|+++..++.||.+-|+++|.++++.++ .++++|++|
T Consensus 106 ~~~~g~~~~~v~~~~~~~~~~~--------~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~ 169 (350)
T 3fkd_A 106 CRMYEHEVCFYPSNEDIGEADF--------S--------NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSY 169 (350)
T ss_dssp HHHTTCEEEEEETTSCGGGSCC--------T--------TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTT
T ss_pred HHHcCCeEEEEecCCccccCcc--------C--------CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECch
Confidence 7888999999997 43 44444 2 3556777888999999999999999999876 799999999
Q ss_pred ccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcC
Q psy9807 289 AGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGR 367 (561)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr 367 (561)
+......+....... ....+.+..+++|+++.| ...|+++. ++............|
T Consensus 170 ~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~--------------------- 226 (350)
T 3fkd_A 170 VSFTTEEVIRPADIK-GRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFMKRVAAFSTPW--------------------- 226 (350)
T ss_dssp TTSCSSCCCCGGGGT-TCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHHHHHHTTCCTT---------------------
T ss_pred hhhccCcchhhHHhh-cCCCEEEEecCchhccCcchheEeEEe-CHHHHHHHHHhCCCC---------------------
Confidence 753321111111111 112357888999999844 56788777 554443322211111
Q ss_pred CcchHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceeeecccCccccccccchhhHHHHHH
Q psy9807 368 RFRSLKLWFVLRLLGVKY-LQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLR 446 (561)
Q Consensus 368 ~~~al~lw~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~ 446 (561)
....+..+++...+.... +.+.+++..++.+++.+.|+++|++++. ++..+.+.+++.
T Consensus 227 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~-------------------- 285 (350)
T 3fkd_A 227 AVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVH-PSGTTFFLLRLK-------------------- 285 (350)
T ss_dssp CSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEEC-CCSSSEEEEEES--------------------
T ss_pred CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEC-CCCCcEEEEECC--------------------
Confidence 112333444444443222 3334444458889999999988898875 333344333221
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHh-CCcEEEEeeeE--CCEE
Q psy9807 447 LLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRING-NGKIHLVPSKI--RDVY 523 (561)
Q Consensus 447 ~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~--~g~~ 523 (561)
.. ...++.+.|.+ .|.....+... .+..
T Consensus 286 -----------------------------------------------~~--~~~~l~~~L~~~~gi~v~~g~~f~~~~~~ 316 (350)
T 3fkd_A 286 -----------------------------------------------KG--TAAELKKYMLEEYNMLIRDASNFRGLDES 316 (350)
T ss_dssp -----------------------------------------------SS--CHHHHHHHHHHTTCEECEECTTSTTCCTT
T ss_pred -----------------------------------------------CC--CHHHHHHHHHHHCCEEEEeCccCCCCCCC
Confidence 11 13578888888 66544433222 2356
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 524 FLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 524 ~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
++|++++ +++++++++++|+++.++
T Consensus 317 ~iRis~~----~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 317 YVRITTQ----RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp EEEEECC----CHHHHHHHHHHHHHHHTC
T ss_pred EEEEEcC----CHHHHHHHHHHHHHHHHH
Confidence 8999855 667899999999887644
No 190
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.64 E-value=3.4e-14 Score=150.55 Aligned_cols=296 Identities=13% Similarity=0.004 Sum_probs=171.0
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--chH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--TEL 208 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~s~ 208 (561)
..++.+++++++|.+ ..+|++|||+||..|+.+++...... . +.. ...+++++.... .+.
T Consensus 120 ~~~l~~~la~~~g~~-----------~v~~~~sGseA~~~al~~~~~~~~~~---~--g~~--~g~~~vi~~~~~yhg~~ 181 (439)
T 2oat_A 120 LGEYEEYITKLFNYH-----------KVLPMNTGVEAGETACKLARKWGYTV---K--GIQ--KYKAKIVFAAGNFWGRT 181 (439)
T ss_dssp HHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHHHHHHHT---T--CCC--TTCCEEEEETTCCCCSS
T ss_pred HHHHHHHHHHhcCCC-----------EEEEeCCHHHHHHHHHHHHHHHhhhc---c--CCC--CCCCeEEEEcCCCCCCC
Confidence 334445556666642 46899999999999999887532110 0 000 001245554433 333
Q ss_pred HHHHHhcc------------CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc----CHHHHH
Q psy9807 209 EVVMLDWL------------GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD----CLEEIG 272 (561)
Q Consensus 209 ~kaa~~~g------------~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id----pl~eI~ 272 (561)
..++.+.+ ..+..+| ..|+++|+++|+. + .+.+|+++.....+|.+. ++++|.
T Consensus 182 ~~~~~~~g~~~~~~~~~p~~~~v~~~~----~~d~~~le~~l~~--~-----~~~~vi~ep~~~~~G~~~~~~~~l~~l~ 250 (439)
T 2oat_A 182 LSAISSSTDPTSYDGFGPFMPGFDIIP----YNDLPALERALQD--P-----NVAAFMVEPIQGEAGVVVPDPGYLMGVR 250 (439)
T ss_dssp HHHHTTCCCHHHHTTSCSCCTTEEEEC----SSCHHHHHHHTTS--T-----TEEEEEECSSBTTTTSBCCCTTHHHHHH
T ss_pred HhHhhcCCChhcccCCCCCCCCeEEeC----CCCHHHHHHHhCC--C-----CEEEEEEECCCCCCCCcCCCHHHHHHHH
Confidence 34444433 3566666 3489999999853 1 466777776666688766 899999
Q ss_pred HHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhHHHhhccCCCccccCC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQ 351 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~ 351 (561)
++|++||+++++|.+|.+.......+.....++ ..|.+ +++|++++. ...|+++.++ +.. ..+.. .. .
T Consensus 251 ~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~-~~Di~--t~sK~l~~G~~~~G~v~~~~-~~~-~~l~~--~~----~ 319 (439)
T 2oat_A 251 ELCTRHQVLFIADEIQTGLARTGRWLAVDYENV-RPDIV--LLGKALSGGLYPVSAVLCDD-DIM-LTIKP--GE----H 319 (439)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEE--EECGGGGTTSSCCEEEEECH-HHH-TTSCT--TS----S
T ss_pred HHHHHcCCEEEEeccccCCccCCcchhHHHhCC-CCcEE--EecccccCCCCCeEEEEECH-HHH-hccCC--CC----c
Confidence 999999999999999975322111111011122 35766 567999864 4588888854 322 22211 00 0
Q ss_pred CCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--cccccceeeecccCc
Q psy9807 352 QGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY--EVLMGLVCFRLKHWQ 429 (561)
Q Consensus 352 ~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~--~~~~~~v~f~~~~~~ 429 (561)
+. +. ..-.........+++.+.. +++.++..++.+++.+.|++. ++.++. +....++.+.+
T Consensus 320 -~~-------t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l---- 382 (439)
T 2oat_A 320 -GS-------TY-GGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVI---- 382 (439)
T ss_dssp -CC-------SS-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEE----
T ss_pred -cc-------CC-CcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEE----
Confidence 00 00 0001122223344444433 356778888999999999886 333221 11222322222
Q ss_pred cccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCc-HHHHHHHHHHHh
Q psy9807 430 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPN-EINEKLLKRING 508 (561)
Q Consensus 430 ~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~l~~~L~~ 508 (561)
.+.. ....++.+.|.+
T Consensus 383 ---------------------------------------------------------------~~~~~~~~~~l~~~l~~ 399 (439)
T 2oat_A 383 ---------------------------------------------------------------KETKDWDAWKVCLRLRD 399 (439)
T ss_dssp ---------------------------------------------------------------CCCSSCCHHHHHHHHHH
T ss_pred ---------------------------------------------------------------ecCccHHHHHHHHHHHH
Confidence 1110 113468888888
Q ss_pred CCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 509 NGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 509 ~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
.|.. +.+ .+..++|+++. ..++++|+++++++|+++.+
T Consensus 400 ~Gv~-v~~---~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 400 NGLL-AKP---THGDIIRFAPP-LVIKEDELRESIEIINKTIL 437 (439)
T ss_dssp TTEE-CCB---SSSSEEEECCC-TTCCHHHHHHHHHHHHHHHH
T ss_pred CCeE-Eec---CCCCEEEEECc-cCCCHHHHHHHHHHHHHHHH
Confidence 8744 333 23568999854 56688999999999988754
No 191
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.64 E-value=4.7e-15 Score=153.75 Aligned_cols=159 Identities=14% Similarity=-0.010 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
..+|+++.+++++++|.++. ...++|+|||+|+..++.+. . ++++++....
T Consensus 57 ~~~~~~~~~~~a~~~g~~~~--------~~~~~~~ggt~a~~~~~~~~--~-----------------gd~Vl~~~~~y~ 109 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDEN--------DKCVGFNRTSSAILATILAL--K-----------------PKKVIHYLPELP 109 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCTT--------EEEEEESSHHHHHHHHHHHH--C-----------------CSEEEEECSSSS
T ss_pred hHHHHHHHHHHHHHhCCCCc--------ceEEEEcChHHHHHHHHHhC--C-----------------CCEEEEecCCCC
Confidence 45678888888999998421 14699999999998887653 1 2345555542
Q ss_pred --chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEE-EEEecCCCCCc-cccCHHHHHHHHhhcCce
Q psy9807 206 --TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQ-VVATLGTTNCC-AFDCLEEIGQVCRQKDVW 281 (561)
Q Consensus 206 --~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~-vv~t~gtt~tG-~idpl~eI~~ia~~~~~~ 281 (561)
+++..++...|.+++.+ +|+++|+++ .+ .+.+ |+.+..++.+| ...|+++|+++|++||++
T Consensus 110 ~~~~~~~~~~~~g~~~~~v------~d~~~l~~~-~~--------~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~ 174 (374)
T 2aeu_A 110 GHPSIERSCKIVNAKYFES------DKVGEILNK-ID--------KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAI 174 (374)
T ss_dssp CCTHHHHHHHHTTCEEEEE------SCHHHHHTT-CC--------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCC
T ss_pred ccHHHHHHHHHcCcEEEEe------CCHHHHHhc-CC--------CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCE
Confidence 45445666778887776 488888876 43 4567 77777778888 899999999999999999
Q ss_pred EEechhcccccccCccccc-cccCccccceeeecCCccccccccceeEEecC
Q psy9807 282 LHVDAAYAGSAFICPENRY-LMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~-~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
+++|++|+.... .+.... ... ..+|.++.++||++++| ..|+++.++
T Consensus 175 li~De~~~~~~~-~~~~~~~~~~--~~~di~~~S~sK~l~g~-~~G~~~~~~ 222 (374)
T 2aeu_A 175 VFVDDASGARVR-LLFNQPPALK--LGADLVVTSTDKLMEGP-RGGLLAGKK 222 (374)
T ss_dssp EEEECTTHHHHH-HHTTCCCHHH--HTCSEEEEETTSSSSSC-SCEEEEEEH
T ss_pred EEEECCcccccc-cccccCCccc--cCCcEEEecCcccccCc-ceEEEEECH
Confidence 999999986431 011110 111 13599999999998765 778877754
No 192
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.63 E-value=1.3e-14 Score=152.01 Aligned_cols=292 Identities=8% Similarity=-0.083 Sum_probs=167.9
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHh-hccc-cccccccChhhHHHHHHHHHHHHHhcCCC
Q psy9807 68 TWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSD-SIAC-IGFTWIASPACTELEVVMLDWLGKMLDLP 145 (561)
Q Consensus 68 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~-~~~~~~~sp~~~~lE~~~~~~la~l~g~~ 145 (561)
.+..+.+.+.+.-.+...+..+..++++...+..++.+ .+.+.. .+.. ....|...+...++.+.+.+|+.+..|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v-~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~ 93 (412)
T 1yaa_A 15 ALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSV-KAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDA 93 (412)
T ss_dssp TTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHH-HHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHH
T ss_pred cHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHH-HHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCC
Confidence 34555555544211223334444444443333333443 344444 4432 22234344456788888888887655532
Q ss_pred ccccccCCCCCCeEE--eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEe
Q psy9807 146 KEFLACSGGKGGGVI--QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDL 222 (561)
Q Consensus 146 ~~~~~~~~~~~~g~~--t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v 222 (561)
-+ ....++ |+|||+|+..++...+.. . + ++++++.... .+...+++..|.+++.+
T Consensus 94 ~~-------~~~i~~~~t~g~~~a~~~~~~~~~~~--~------~-------gd~Vl~~~p~~~~~~~~~~~~g~~~~~v 151 (412)
T 1yaa_A 94 LQ-------EDRVISVQSLSGTGALHISAKFFSKF--F------P-------DKLVYLSKPTWANHMAIFENQGLKTATY 151 (412)
T ss_dssp HH-------TTCEEEEEEEHHHHHHHHHHHHHHHH--C------T-------TCCEEEEESCCTTHHHHHHTTTCCEEEE
T ss_pred CC-------cceEEEEeccchHhHHHHHHHHHHHh--C------C-------CCEEEEeCCCCccHHHHHHHcCceEEEE
Confidence 11 025788 999999987764332211 0 0 2345555555 67777788889999999
Q ss_pred eC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHHHHhhcCceEEechhcccccccC-
Q psy9807 223 PK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQVCRQKDVWLHVDAAYAGSAFIC- 295 (561)
Q Consensus 223 ~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~ia~~~~~~lhVDaA~gg~~~~~- 295 (561)
|. + ++.+|+++|++++++ .. ....+++.+...+.||.+- ++++|+++|++||+++++|.+|++...-.
T Consensus 152 ~~~~~~~~~~d~~~l~~~l~~--~~---~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 226 (412)
T 1yaa_A 152 PYWANETKSLDLNGFLNAIQK--AP---EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDL 226 (412)
T ss_dssp ECEETTTTEECHHHHHHHHHH--SC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCH
T ss_pred eeecCCCCccCHHHHHHHHHh--CC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcc
Confidence 87 3 788999999999976 21 1234555588888899985 46678999999999999999997533211
Q ss_pred -cccccc--ccCccc---cceeeecCCcccccccc--ceeEE--e----cChhh---HHHhhcc--CCCccccCCCCCCC
Q psy9807 296 -PENRYL--MKGVEL---ADSFNFNPHKWMLVTFD--CSAMW--L----KDPSW---VVNAFNV--DPLYLKHDQQGSAP 356 (561)
Q Consensus 296 -~~~~~~--~~gi~~---aDsi~~~~HK~l~~P~g--~g~l~--~----r~~~~---l~~~~~~--~~~yl~~~~~~~~~ 356 (561)
...... +..... -+.+..++||.++ |.| +|.++ . ++... +...+.. ...|.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--------- 296 (412)
T 1yaa_A 227 DKDAYAVRLGVEKLSTVSPVFVCQSFAKNAG-MYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVS--------- 296 (412)
T ss_dssp HHHTHHHHHHHHHTTTTCCEEEEEECTTTSC-CGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTS---------
T ss_pred cchhHHHHHHHhcCCCCcceEEEeccCCCCC-CcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccC---------
Confidence 011000 111111 2467889999887 545 68777 4 23331 2221211 00110
Q ss_pred CCCcccccCcCCcchHHHHHHHHHhh--------HHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy9807 357 DYRHWQIPLGRRFRSLKLWFVLRLLG--------VKYLQEYIRKQISLAKEFEQLVRSDD 408 (561)
Q Consensus 357 ~~~~~~~~~sr~~~al~lw~~l~~~g--------~~g~~~~~~~~~~la~~l~~~l~~~~ 408 (561)
....+..+++.+.+. .+.++++.++..++.+++.+.|++.+
T Consensus 297 -----------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 297 -----------NPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp -----------SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 011222222333332 24677788888889999999998763
No 193
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.63 E-value=1.5e-13 Score=144.50 Aligned_cols=292 Identities=8% Similarity=-0.067 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHhcCCC-ccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 130 LEVVMLDWLGKMLDLP-KEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 130 lE~~~~~~la~l~g~~-~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
...++.+.+++.+|.+ ++ ..+||+|||+||..++.+++... ++++++.... .
T Consensus 87 ~~~~l~~~la~~~~~~~~~---------~v~~~~gg~ea~~~ai~~~~~~~----------------~~~vi~~~p~yh~ 141 (419)
T 2eo5_A 87 PQLELAKKLVTYSPGNFQK---------KVFFSNSGTEAIEASIKVVKNTG----------------RKYIIAFLGGFHG 141 (419)
T ss_dssp HHHHHHHHHHHHSSCSSCE---------EEEEESSHHHHHHHHHHHHHTTS----------------CCEEEEETTCCCC
T ss_pred HHHHHHHHHHHhCCCCcCC---------EEEEeCchHHHHHHHHHHHHHhh----------------CCcEEEECCCcCC
Confidence 3455667788888875 33 57999999999999988765310 1245555433 2
Q ss_pred hHHHHHHhcc-------------CCeEEeeC-CCCc----------------cChhhHH-HHHhhhchhhcCCceEEEEE
Q psy9807 207 ELEVVMLDWL-------------GKMLDLPK-EFLA----------------CSGGKGG-GVIQRKSDREMCSDLLQVVA 255 (561)
Q Consensus 207 s~~kaa~~~g-------------~~v~~v~~-~~g~----------------~d~~~Le-~~i~~~~~~~~g~~p~~vv~ 255 (561)
+...++.+.+ ..++.+|. ++.+ +|+++|+ ++|++ .. ....+.+|++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~--~~-~~~~~~~vi~ 218 (419)
T 2eo5_A 142 RTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVN--LV-PPEEVAGIFF 218 (419)
T ss_dssp SSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHH--TC-CGGGEEEEEE
T ss_pred CCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhh--cc-CCCCEEEEEE
Confidence 2333332221 25777877 4332 4788999 88864 21 0014556666
Q ss_pred ecCCCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEe
Q psy9807 256 TLGTTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWL 330 (561)
Q Consensus 256 t~gtt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~ 330 (561)
+...+.+|.+-| +++|+++|++||+++|+|.+|.+.............++ ..|.++ +.|+++.+ ..+|.++.
T Consensus 219 ~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~~riG~~~~ 295 (419)
T 2eo5_A 219 EPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT-VPDVIT--LAKALGGGIMPIGATIF 295 (419)
T ss_dssp CSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTTSCCEEEEE
T ss_pred eCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC-CCCEEE--ecccccCCccceEEEEE
Confidence 665566898776 99999999999999999999985432211111001122 346664 56999876 77898888
Q ss_pred cChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q psy9807 331 KDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRF 410 (561)
Q Consensus 331 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~ 410 (561)
++. .. .+. .. . .. +-....+...+++..+.. ++++.++..++.+++.+.|+++ +
T Consensus 296 ~~~-~~--~~~---~~----~-~~-----------t~~~n~~~~~aa~aal~~--~~~~~~~~~~~~~~l~~~L~~~--~ 349 (419)
T 2eo5_A 296 RKD-LD--FKP---GM----H-SN-----------TFGGNALACAIGSKVIDI--VKDLLPHVNEIGKIFAEELQGL--A 349 (419)
T ss_dssp EGG-GC--CC-------------------------CCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTTS--S
T ss_pred chH-hh--cCC---cc----c-CC-----------CCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHh--h
Confidence 653 21 121 00 0 00 001123333333333321 2236777888899999999875 2
Q ss_pred EEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 411 EVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 411 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
..+ ++..+.+.+++
T Consensus 350 ~~~-~~~g~~~~i~~----------------------------------------------------------------- 363 (419)
T 2eo5_A 350 DDV-RGIGLAWGLEY----------------------------------------------------------------- 363 (419)
T ss_dssp SEE-EEETTEEEEEC-----------------------------------------------------------------
T ss_pred hhe-EeeeEEEEEEE-----------------------------------------------------------------
Confidence 111 22233322322
Q ss_pred ecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.+...... +.+.|.+.|..+. +. +..++|+++. ..+++++++++++.|+++.++
T Consensus 364 --~~~~~~~~-~~~~l~~~Gv~v~-~~---~~~~lRis~~-~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 364 --NEKKVRDR-IIGESFKRGLLLL-PA---GRSAIRVIPP-LVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp --SCHHHHHH-HHHHHHHTTEECE-EE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred --ecCccHHH-HHHHHHHCCCEEe-cC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHh
Confidence 11112244 7788887775443 32 2358999754 566889999999999887654
No 194
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.63 E-value=1.6e-13 Score=145.69 Aligned_cols=324 Identities=12% Similarity=0.012 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccc-
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACT- 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~- 206 (561)
.+...++.+|+++.++...+ ..+||+|||+||..|+.+++...... +.+ ..+++++....|
T Consensus 86 ~~~~~~la~~l~~~~~~~~~---------~v~~~~sGseA~~~al~~~~~~~~~~---G~~------~~~~vi~~~~~yh 147 (448)
T 3dod_A 86 NVPATQLAETLIDISPKKLT---------RVFYSDSGAEAMEIALKMAFQYWKNI---GKP------EKQKFIAMKNGYH 147 (448)
T ss_dssp EHHHHHHHHHHHHHSCTTEE---------EEEEESSHHHHHHHHHHHHHHHHHHT---TCT------TCCEEEEEC----
T ss_pred CHHHHHHHHHHHHhCCCCCC---------EEEEeCchHHHHHHHHHHHHHHHHhh---CCC------CCCEEEEECCCCC
Confidence 34566778888998865433 57999999999999999988653211 000 012444443331
Q ss_pred -hHHHHHHhcc------------CCeEEeeC-CCCc-----------cChhhHHHHHhhhchhhcCCceEEEEEecCC-C
Q psy9807 207 -ELEVVMLDWL------------GKMLDLPK-EFLA-----------CSGGKGGGVIQRKSDREMCSDLLQVVATLGT-T 260 (561)
Q Consensus 207 -s~~kaa~~~g------------~~v~~v~~-~~g~-----------~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt-t 260 (561)
+...+..+.+ ..+..+|. ...+ .|+++|+++|++ .. ..+.+|++.-.. +
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~---~~~a~vi~ep~~~~ 222 (448)
T 3dod_A 148 GDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEE--HH---EEIAALSIESMVQG 222 (448)
T ss_dssp -------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHH--HG---GGEEEEEEESSEES
T ss_pred CccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHh--CC---CCEEEEEEeCcccC
Confidence 1111112221 23455555 3322 358999999974 21 146677777766 7
Q ss_pred CCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhh
Q psy9807 261 NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSW 335 (561)
Q Consensus 261 ~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~ 335 (561)
++|.+-| +++|+++|++||+++++|.+|.+.......+.....++ ..|.+++ .|.++..+ ..|+++.++. .
T Consensus 223 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~--sK~l~~G~~~ig~v~~~~~-~ 298 (448)
T 3dod_A 223 ASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAA--GKGITGGYLPIAVTFATED-I 298 (448)
T ss_dssp TTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH-H
T ss_pred CCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEe--cccccCCcCceEEEEECHH-H
Confidence 7887776 99999999999999999999886432222111111122 2476665 59998653 6777777442 2
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc---CCCeEE
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS---DDRFEV 412 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~---~~g~~l 412 (561)
. ..+... +-... ......+-....+...+++..+....-++++++..++.+++++.|++ .|.+..
T Consensus 299 ~-~~~~~~--~~~~~---------~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 366 (448)
T 3dod_A 299 Y-KAFYDD--YENLK---------TFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGD 366 (448)
T ss_dssp H-HTTCSC--GGGCC---------CCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred H-HHhhhc--cccCC---------cccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 2 222210 00000 00000111123343444444333211134566666667777766664 332222
Q ss_pred eccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeec
Q psy9807 413 IYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL 492 (561)
Q Consensus 413 ~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~ 492 (561)
. +....++.+.+.+.. . .. ..|
T Consensus 367 ~-~~~g~~~~~~~~~~~-~-~~-----------------------------------------------------~~~-- 388 (448)
T 3dod_A 367 I-RQLGFMCGAELVRSK-E-TK-----------------------------------------------------EPY-- 388 (448)
T ss_dssp E-EEETTEEEEEECSBT-T-TT-----------------------------------------------------BCC--
T ss_pred E-EeeeEEEEEEEccCc-c-cc-----------------------------------------------------ccc--
Confidence 1 112223333322100 0 00 000
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 493 KGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 493 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
........++.+.+.+.|.++ .+. + .++|++.. ...++++++++++.|+++.+++.
T Consensus 389 ~~~~~~~~~~~~~l~~~Gv~~-~~~---~-~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 389 PADRRIGYKVSLKMRELGMLT-RPL---G-DVIAFLPP-LASTAEELSEMVAIMKQAIHEVT 444 (448)
T ss_dssp CGGGCHHHHHHHHHHHTTEEC-CEE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHCCcEE-ecc---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHh
Confidence 000001356788888887544 332 3 58999744 56688999999999999887764
No 195
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.63 E-value=1.1e-13 Score=147.88 Aligned_cols=320 Identities=10% Similarity=-0.005 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+...++.+.++++++.+.+ ..+|++|||+||..|+.++|...... +.+ ...++++....
T Consensus 99 ~~~~~lae~l~~~~~~~~~---------~v~~~~sGseA~~~aik~a~~~~~~~---g~~------~~~~ii~~~~~yHg 160 (472)
T 3hmu_A 99 VPAIALAQKLAELAPGDLN---------HVFFAGGGSEANDTNIRMVRTYWQNK---GQP------EKTVIISRKNAYHG 160 (472)
T ss_dssp HHHHHHHHHHHHHSCTTEE---------EEEEESSHHHHHHHHHHHHHHHHHHT---TCT------TCCEEEEETTCCCC
T ss_pred HHHHHHHHHHHHhCCCCCC---------EEEEeCCHHHHHHHHHHHHHHHHHhc---CCC------CCCEEEEEcCcCCC
Confidence 4455666677888765433 57999999999999999998753211 000 01244444433
Q ss_pred chHHHHHHhccC-----------CeEEeeC-CCCc----cC--------hhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 206 TELEVVMLDWLG-----------KMLDLPK-EFLA----CS--------GGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 206 ~s~~kaa~~~g~-----------~v~~v~~-~~g~----~d--------~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
+.+ -+..+.+. .+..+|. ...+ +| +++|++.|++ .. ...+.+|++.-....
T Consensus 161 ~t~-~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~--~~--~~~~aavi~epv~~~ 235 (472)
T 3hmu_A 161 STV-ASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILE--LG--ENRVAAFIAEPVQGA 235 (472)
T ss_dssp SSH-HHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHH--HC--GGGEEEEEECSSBST
T ss_pred ccH-HhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHh--cC--CCCEEEEEEcCccCC
Confidence 222 12222221 3555664 2111 33 7888888864 21 125678888778888
Q ss_pred CccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhhH
Q psy9807 262 CCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSWV 336 (561)
Q Consensus 262 tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~l 336 (561)
+|.+-| |++|.++|++||++|++|.+|.+.......+.....++ ..|.+++ .|+++.. ...|+++.++ +..
T Consensus 236 gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v-~pdi~t~--sK~l~gg~~plG~v~~~~-~i~ 311 (472)
T 3hmu_A 236 GGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGI-RPHIMTI--AKGLSSGYAPIGGSIVCD-EVA 311 (472)
T ss_dssp TTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEE--CGGGTTTSSCCEEEEEEH-HHH
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCC-CCceeee--chhhhcCCcceEEEEECH-HHH
Confidence 899888 99999999999999999999986533222111111122 3577765 4998876 3667777743 332
Q ss_pred HHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHH-HHHHHHHHHHhcC---CCeEE
Q psy9807 337 VNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQI-SLAKEFEQLVRSD---DRFEV 412 (561)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~-~la~~l~~~l~~~---~g~~l 412 (561)
..+. ...+... .+-....+...+++..+....-++++++.. ++.+++++.|+++ |.+..
T Consensus 312 -~~~~-~~~~~~~---------------~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~ 374 (472)
T 3hmu_A 312 -HVIG-KDEFNHG---------------YTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGE 374 (472)
T ss_dssp -HHHT-TSCBCCC---------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEE
T ss_pred -Hhcc-cCCcccc---------------CCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 2231 1111100 011123344444444443211235566667 7778888887654 33322
Q ss_pred eccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeec
Q psy9807 413 IYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL 492 (561)
Q Consensus 413 ~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~ 492 (561)
+. ....++.|.+.+.. ..+ ..|
T Consensus 375 vr-~~G~~~~i~~~~~~--~~~-----------------------------------------------------~~~-- 396 (472)
T 3hmu_A 375 AK-IVGMMASIALTPNK--ASR-----------------------------------------------------AKF-- 396 (472)
T ss_dssp EE-EETTEEEEEECSCG--GGT-----------------------------------------------------CCB--
T ss_pred EE-ecCceEEEEEecCc--ccc-----------------------------------------------------ccc--
Confidence 21 22233333322100 000 000
Q ss_pred CCC-cHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 493 KGP-NEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 493 ~~~-~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
.+. ......+.+.|.+.|.++... | .++|++.. ...+++++++++++|+++.+++.++
T Consensus 397 ~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p~-~~~t~e~i~~~l~~l~~~l~~~~~~ 455 (472)
T 3hmu_A 397 ASEPGTIGYICRERCFANNLIMRHV----G-DRMIISPP-LVITPAEIDEMFVRIRKSLDEAQAE 455 (472)
T ss_dssp SSCTTHHHHHHHHHHHHTTBCCEEE----T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHCCcEEEec----C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 001 234567888899988655432 2 68999844 5668899999999999988776543
No 196
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.62 E-value=2.9e-14 Score=148.83 Aligned_cols=235 Identities=8% Similarity=-0.082 Sum_probs=144.9
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhcc-ccccccccChhhHHHHHHHHHHHHHhcCCCc
Q psy9807 68 TWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIA-CIGFTWIASPACTELEVVMLDWLGKMLDLPK 146 (561)
Q Consensus 68 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~ 146 (561)
..-.+.+.+...-.+...+.....|+++...++..+.+.. .+....+ .....|.......++-+.+.+|+.+..|.+-
T Consensus 14 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~-a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~ 92 (401)
T 7aat_A 14 PILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRK-AEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAF 92 (401)
T ss_dssp HHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHH-HHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHH
T ss_pred hhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHH-HHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCcccc
Confidence 3445555555433333344444445555544444444433 2223222 2333444444556788888888877666431
Q ss_pred cccccCCCCCCeEE--eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEee
Q psy9807 147 EFLACSGGKGGGVI--QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLP 223 (561)
Q Consensus 147 ~~~~~~~~~~~g~~--t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~ 223 (561)
+ ....++ |+|||+|+..++.+.+... . + ++.+++.... .+....++..|.+++.+|
T Consensus 93 ~-------~~~i~~v~t~G~~~al~~~~~~l~~~~-~------~-------gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~ 151 (401)
T 7aat_A 93 K-------SGRYVTVQGISGTGSLRVGANFLQRFF-K------F-------SRDVYLPKPSWGNHTPIFRDAGLQLQAYR 151 (401)
T ss_dssp H-------TTCEEEEEEEHHHHHHHHHHHHHHHHC-T------T-------CCEEEEEESCCTTHHHHHHHTTCEEEEEE
T ss_pred c-------cCceEEEecCcchHHHHHHHHHHHHhc-c------C-------CCEEEEcCCCchhHHHHHHHcCCeeEeee
Confidence 1 025566 9999999988776543211 0 0 2345555444 666777788899999999
Q ss_pred C---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHHHHHhhcCceEEechhcccccccCcc
Q psy9807 224 K---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPE 297 (561)
Q Consensus 224 ~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~ 297 (561)
. +++.+|++.+++.+++ . ...+.+++.+...+.||.+ +++++|+++|++||+++++|.+|+....-...
T Consensus 152 ~~~~~~~~~d~~~l~~~l~~--~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 226 (401)
T 7aat_A 152 YYDPKTCSLDFTGAMEDISK--I---PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDIN 226 (401)
T ss_dssp CEETTTTEECHHHHHHHHTT--S---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHH
T ss_pred eeccccCccCHHHHHHHHHh--C---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCcc
Confidence 7 3789999999888865 2 1246778888888889965 56889999999999999999998754332110
Q ss_pred -----ccccccCccccceeeecCCccccccc-cceeEEe
Q psy9807 298 -----NRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWL 330 (561)
Q Consensus 298 -----~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~ 330 (561)
.... .....-..+..++||.++.|. -+|.+++
T Consensus 227 ~~~~~~~~~-~~~~~~~i~~~S~sK~~~~~G~RiG~l~~ 264 (401)
T 7aat_A 227 RDAWALRHF-IEQGIDVVLSQSYAKNMGLYGERAGAFTV 264 (401)
T ss_dssp HHTHHHHHH-HHTTCCCEEEEECTTTSCCGGGCEEEEEE
T ss_pred ccHHHHHHH-HhcCCcEEEEecCCcccccccCceEEEEE
Confidence 1110 011123567899999987553 2677775
No 197
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.62 E-value=2.9e-14 Score=149.18 Aligned_cols=222 Identities=12% Similarity=-0.009 Sum_probs=145.8
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE---eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI---QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~---t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
..++|+ .+++++|.+. .++ ++|||+||..++.+.... ++.+++..
T Consensus 61 ~~~Le~----~lA~l~g~e~-----------alv~p~~~sGt~Ai~~al~all~~-----------------GD~Vl~~~ 108 (409)
T 3jzl_A 61 RDTLER----VYATVFKTEA-----------ALVRPQIISGTHAISTVLFGILRP-----------------DDELLYIT 108 (409)
T ss_dssp HHHHHH----HHHHHHTCSE-----------EEEETTSCSHHHHHHHHHHHHCCT-----------------TCEEEECS
T ss_pred HHHHHH----HHHHHhCCCc-----------EEEECCCccHHHHHHHHHHHhcCC-----------------CCEEEEeC
Confidence 445555 5688888764 355 899999998777653211 22444443
Q ss_pred -cc-chHHH----------HHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEec----CCCCCcccc
Q psy9807 204 -AC-TELEV----------VMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATL----GTTNCCAFD 266 (561)
Q Consensus 204 -s~-~s~~k----------aa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~----gtt~tG~id 266 (561)
+. ..... .+...|.+++.+|. +++.+|+++|+++|++ ++.+|++.. .++.+|.+.
T Consensus 109 ~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~--------~tklV~i~~s~g~p~nptg~v~ 180 (409)
T 3jzl_A 109 GQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTP--------KTKMIGIQRSRGYADRPSFTIE 180 (409)
T ss_dssp SSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCT--------TEEEEEEECSCTTSSSCCCCHH
T ss_pred CCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccC--------CCeEEEEECCCCCCCCCcCccc
Confidence 33 33332 23456788999998 8899999999999976 577888887 889999999
Q ss_pred CHHHHHHHHhh--cCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhc-c
Q psy9807 267 CLEEIGQVCRQ--KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFN-V 342 (561)
Q Consensus 267 pl~eI~~ia~~--~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~-~ 342 (561)
|+++|+++|++ ||+++|||.||+.+..... .... .+|.++.++||+++.+. ..|.+++.+++.+..... .
T Consensus 181 ~l~~I~~la~~~~~~~~livD~a~~~~~~~~~---p~~~---g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~ 254 (409)
T 3jzl_A 181 KIKEMIVFVKNINPEVIVFVDNCYGEFVEYQE---PPEV---GADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRL 254 (409)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECTTCTTTSSCC---SGGG---TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCEEEEeCCcccccccCC---cccc---CCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHh
Confidence 99999999999 9999999999985432111 1111 35999999999998764 223444445554443322 1
Q ss_pred CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 343 DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 343 ~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
...++... .+-.... .|+.++ |......++++..+++.++++.|+++ ++++.
T Consensus 255 ~~~~~g~~--------------~g~~~~~--~~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~v~ 306 (409)
T 3jzl_A 255 TTPGIGRE--------------AGASLYS--LLEMYQ--GFFLAPHVTAQAIKGARFTAAMLAEF-GVEAD 306 (409)
T ss_dssp SCTTTGGG--------------CCCCTTC--HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE
T ss_pred cccccccc--------------ccccHHH--HHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHhC-CCccc
Confidence 11221110 0000110 233332 34456678889999999999999998 67774
No 198
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.62 E-value=2.7e-13 Score=143.88 Aligned_cols=317 Identities=11% Similarity=-0.001 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
++..++.+.++++++.+.+ ..+||+|||+||..++.+++.....+ +.+ ..+++++.... .
T Consensus 93 ~~~~~l~~~la~~~~~~~~---------~v~~~~ggsea~~~al~~~~~~~~~~---g~~------~~~~vi~~~~~yhg 154 (449)
T 3a8u_X 93 PLSFQLAEKITDLTPGNLN---------HVFFTDSGSECALTAVKMVRAYWRLK---GQA------TKTKMIGRARGYHG 154 (449)
T ss_dssp HHHHHHHHHHHTTSSTTEE---------EEEEESSHHHHHHHHHHHHHHHHHHT---TCT------TCCEEEEETTCCCC
T ss_pred HHHHHHHHHHHHhCCCCCC---------EEEEcCcHHHHHHHHHHHHHHHHHhc---CCC------CCCEEEEECCCcCC
Confidence 3445666777888765443 57999999999999998877532110 000 01245544433 2
Q ss_pred hHHHHHHhcc------------CCeEEeeC-CCC-----ccC--------hhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 207 ELEVVMLDWL------------GKMLDLPK-EFL-----ACS--------GGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 207 s~~kaa~~~g------------~~v~~v~~-~~g-----~~d--------~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
+...++...+ ..+..++. ... .+| +++|+++|++ .. ...+.+|+++...+
T Consensus 155 ~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~--~~--~~~~~~vi~~p~~~ 230 (449)
T 3a8u_X 155 VNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIEL--HD--ASNIAAVFVEPLAG 230 (449)
T ss_dssp SSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHH--HC--GGGEEEEEECSSBT
T ss_pred CChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHh--cC--CCCEEEEEEcCccC
Confidence 3333333332 23555655 211 256 8999999975 21 01466777776667
Q ss_pred CCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhh
Q psy9807 261 NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSW 335 (561)
Q Consensus 261 ~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~ 335 (561)
.+|.+.| +++|.++|++||+++++|.+|.+.......+.....++ ..|.+ +++|+++.- ...|++++++ +.
T Consensus 231 ~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~di~--s~sK~l~~G~~~~G~~~~~~-~~ 306 (449)
T 3a8u_X 231 SAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGV-TPDLM--CIAKQVTNGAIPMGAVIAST-EI 306 (449)
T ss_dssp TTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEE--EECGGGGTTSSCCEEEEEEH-HH
T ss_pred CCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCC-CCCEE--EEcccccCCCCceEEEEECH-HH
Confidence 7999888 99999999999999999999964322211111001122 24766 456999741 2378888754 33
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY- 414 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~- 414 (561)
. ..+.....- .... .+ ....+-....+...+++..+....-+++.++..++.+++++.|++++++.++.
T Consensus 307 ~-~~l~~~~~~---~~~~---~~---~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 376 (449)
T 3a8u_X 307 Y-QTFMNQPTP---EYAV---EF---PHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGAKNVID 376 (449)
T ss_dssp H-HHHHTCSSC---TTSC---SS---CCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEE
T ss_pred H-HHhhccCcc---cccc---cc---cccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 3 223211000 0000 00 00011112233333333333211112467788888899999998754333221
Q ss_pred -cccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecC
Q psy9807 415 -EVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLK 493 (561)
Q Consensus 415 -~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~ 493 (561)
+....++.+.+.+.
T Consensus 377 ~~~~g~~~~i~~~~~----------------------------------------------------------------- 391 (449)
T 3a8u_X 377 IRNFGLAGAIQIAPR----------------------------------------------------------------- 391 (449)
T ss_dssp EEEETTEEEEEECCB-----------------------------------------------------------------
T ss_pred EeeeEEEEEEEEecC-----------------------------------------------------------------
Confidence 12223333322110
Q ss_pred CCcH--HHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 494 GPNE--INEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 494 ~~~~--~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.... ...++.+.|.+.|... .+. + .++|+++. ..++++|+++++++|+++.++
T Consensus 392 ~~~~~~~~~~~~~~l~~~Gv~v-~~~---g-~~iRis~~-~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 392 DGDAIVRPFEAGMALWKAGFYV-RFG---G-DTLQFGPT-FNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp TTBSSHHHHHHHHHHHHHTEEC-EEE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHCCcEE-ecC---C-CEEEEECC-CcCCHHHHHHHHHHHHHHHHH
Confidence 0000 1225778888776443 332 3 58999854 466889999999999987654
No 199
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.62 E-value=6.5e-14 Score=142.58 Aligned_cols=196 Identities=11% Similarity=0.009 Sum_probs=130.0
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-CCCccChhhH
Q psy9807 157 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKG 234 (561)
Q Consensus 157 ~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~L 234 (561)
..++|+|||+++..++.+. ++++++. .. .++...+...|.+++.+|. +++.+|+++|
T Consensus 78 ~v~~~~G~~~al~~~~~~~--------------------gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l 136 (335)
T 1uu1_A 78 NVSVGNGADEIIYVMMLMF--------------------DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV 136 (335)
T ss_dssp GEEEESSHHHHHHHHHHHS--------------------SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC
T ss_pred HEEEcCChHHHHHHHHHHh--------------------CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc
Confidence 5799999999987766553 1245555 55 5666677778899999998 6678888877
Q ss_pred HHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeec
Q psy9807 235 GGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFN 314 (561)
Q Consensus 235 e~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~ 314 (561)
+ .+.+|+++..++.||.+-|.+++.++++.+| ++++|++|+.... .+ ....+. ....+.+..+
T Consensus 137 -----~--------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~-~~-~~~~~~-~~~~~i~~~s 199 (335)
T 1uu1_A 137 -----G--------EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHG-ES-YVDFLK-KYENLAVIRT 199 (335)
T ss_dssp -----C--------TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHC-CC-CGGGGG-TCSSEEEEEE
T ss_pred -----C--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcc-hh-HHHHhh-hCCCEEEEec
Confidence 3 3456776777889999999999999999999 9999999985321 11 111111 1123688899
Q ss_pred CCcccccc-ccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh-HHHHHHHHHH
Q psy9807 315 PHKWMLVT-FDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG-VKYLQEYIRK 392 (561)
Q Consensus 315 ~HK~l~~P-~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g-~~g~~~~~~~ 392 (561)
+||+++.| ..+|+++. ++............| ....+..+++.+.+. .+.++++.++
T Consensus 200 ~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~---------------------~~~~~~~~~~~~~l~~~~~~~~~~~~ 257 (335)
T 1uu1_A 200 FSKAFSLAAQRVGYVVA-SEKFIDAYNRVRLPF---------------------NVSYVSQMFAKVALDHREIFEERTKF 257 (335)
T ss_dssp STTTTTCGGGCCEEEEE-CHHHHHHHHHHSCTT---------------------CSCHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred chhhcCCcccCeEEEEe-CHHHHHHHHHhcCCC---------------------CcCHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999744 24788888 444333221111111 112233333333332 2457788888
Q ss_pred HHHHHHHHHHHHhcCCCeEEe
Q psy9807 393 QISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 393 ~~~la~~l~~~l~~~~g~~l~ 413 (561)
..++.+++.+.|++. ++++.
T Consensus 258 ~~~~~~~l~~~L~~~-g~~~~ 277 (335)
T 1uu1_A 258 IVEERERMKSALREM-GYRIT 277 (335)
T ss_dssp HHHHHHHHHHHHHHH-TCCBC
T ss_pred HHHHHHHHHHHHHHC-CcEEc
Confidence 889999999999887 66643
No 200
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.60 E-value=6e-14 Score=147.34 Aligned_cols=224 Identities=12% Similarity=0.016 Sum_probs=145.6
Q ss_pred hhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE---eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEe
Q psy9807 126 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI---QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIAS 202 (561)
Q Consensus 126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~---t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~ 202 (561)
...++|+ .+++++|.+. .++ ++|||+||..++.+.... ++.+++.
T Consensus 74 ~~~~Le~----~lA~l~g~e~-----------alv~p~~~sGt~Ai~~al~all~p-----------------GD~Vl~~ 121 (427)
T 3i16_A 74 GRDSLDA----VYARVFNTES-----------ALVRPHFVNGTHALGAALFGNLRP-----------------GNTMLSV 121 (427)
T ss_dssp HHHHHHH----HHHHHHTCSE-----------EEEETTCCSHHHHHHHHHHHHCCT-----------------TCEEEES
T ss_pred HHHHHHH----HHHHHhCCcc-----------eEEeCCCccHHHHHHHHHHHHhCC-----------------CCEEEEe
Confidence 3455664 5688888864 355 899999997777653210 2234444
Q ss_pred c-ccc-hHH-----------HHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEec----CCCCCcc
Q psy9807 203 P-ACT-ELE-----------VVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATL----GTTNCCA 264 (561)
Q Consensus 203 ~-s~~-s~~-----------kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~----gtt~tG~ 264 (561)
. ..| ... +.+...|.+++.+|. +++.+|+++|+++|++ . ..+.+|+++. .++.+|.
T Consensus 122 ~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~--~----~~tklV~i~~s~~~p~nptg~ 195 (427)
T 3i16_A 122 CGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKE--D----ESITLVHIQRSTGYGWRRALL 195 (427)
T ss_dssp SSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHT--C----TTEEEEEEECSCCSSSSCCCC
T ss_pred CCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhC--C----CCCEEEEEEcCCCCCCCCccc
Confidence 3 222 222 334456888999998 8899999999999972 1 1577888877 7888999
Q ss_pred ccCHHHHHHHHhh--cCceEEechhcccccccCccccccccCccccceeeecCCccccccc--cceeEEecChhhHHHhh
Q psy9807 265 FDCLEEIGQVCRQ--KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF--DCSAMWLKDPSWVVNAF 340 (561)
Q Consensus 265 idpl~eI~~ia~~--~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~--g~g~l~~r~~~~l~~~~ 340 (561)
+.|+++|+++|++ ||++++||.+|+.+...... .. ..+|+++.++||+++.+. ..|+++. +++.+....
T Consensus 196 i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p---~~---~gaDiv~~S~sK~lgg~g~~~gG~i~~-~~~li~~l~ 268 (427)
T 3i16_A 196 IEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP---TD---VGADLIAGSLIKNIGGGIAPTGGYLAG-TKDCIEKTS 268 (427)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG---GG---GTCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCCccccccCCc---cc---cCCeEEEecCcccCCCCCCceEEEEEE-CHHHHHHHH
Confidence 9999999999999 99999999999854421111 11 135999999999998732 2366555 444443322
Q ss_pred cc-CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 341 NV-DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 341 ~~-~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
.. ....+.. ..+-.+. ..|..++ |......++++..+++.++++.|+++ ++++.
T Consensus 269 ~~~~~~~~g~--------------~~~~~~~--~a~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~V~ 323 (427)
T 3i16_A 269 YRLTVPGIGG--------------ECGSTFG--VVRSMYQ--GLFLAPHISMEALKGAILCSRIMELA-GFEVM 323 (427)
T ss_dssp HHHSCTTTGG--------------GCCCCTT--CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE
T ss_pred HhcccCccCc--------------cCCccHH--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhC-CCeec
Confidence 11 1111100 0010011 0243333 34456778899999999999999998 66774
No 201
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.59 E-value=6.5e-13 Score=141.48 Aligned_cols=179 Identities=12% Similarity=-0.027 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
+...++.++++++++.+.+ ..+||+|||+||..|+.+++...... +.+ ...++++.... .
T Consensus 95 ~~~~~la~~l~~~~~~~~~---------~v~~~~gGseA~~~al~~~~~~~~~~---g~~------~~~~vi~~~~~yhg 156 (460)
T 3gju_A 95 EASITLAKMIIDRAPKGMS---------RVYFGLSGSDANETNIKLIWYYNNVL---GRP------EKKKIISRWRGYHG 156 (460)
T ss_dssp HHHHHHHHHHHHHSCTTEE---------EEEEESSHHHHHHHHHHHHHHHHHHT---TCT------TCCEEEEETTCCCC
T ss_pred HHHHHHHHHHHhhCCCCcC---------EEEEeCchHHHHHHHHHHHHHHHHhc---CCC------CCCEEEEECCCcCC
Confidence 4566677788888765443 57999999999999999988653211 000 01234443333 1
Q ss_pred hHHHHHHhcc------------CCeEEeeC-CCC-----ccC--------hhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 207 ELEVVMLDWL------------GKMLDLPK-EFL-----ACS--------GGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 207 s~~kaa~~~g------------~~v~~v~~-~~g-----~~d--------~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
+..-+..+.+ ..+..+|. ..+ .++ +++|+++|++ .. ...+.+|++.-..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~--~~--~~~~aaii~ep~~~ 232 (460)
T 3gju_A 157 SGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILA--EG--PETIAAFIGEPILG 232 (460)
T ss_dssp SSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHH--HC--GGGEEEEEECSSBS
T ss_pred CCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHh--cC--CCCEEEEEECCccC
Confidence 1122222222 24566664 211 223 5888888864 21 12567788887777
Q ss_pred CCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecC
Q psy9807 261 NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKD 332 (561)
Q Consensus 261 ~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~ 332 (561)
.+|.+-| +++|+++|++||+++++|.+|.+.......+.....++ ..|.+++ .|.|+.. ...|.++.++
T Consensus 233 ~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~--sK~l~gG~~~lg~v~~~~ 306 (460)
T 3gju_A 233 TGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KPDLITI--AKGLTSAYAPLSGVIVAD 306 (460)
T ss_dssp TTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEE--CGGGTTTSSCCEEEEEEH
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeee--ehhhcCCCCCeEEEEECH
Confidence 7888776 99999999999999999999986532221111111122 3477765 5998775 3677777754
No 202
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.59 E-value=1e-12 Score=140.61 Aligned_cols=323 Identities=10% Similarity=-0.046 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
.+...++.+|++++++.+.+ ..+|++|||+||..|+.++|.....+ +.+ ...++++....
T Consensus 96 ~~~~~~la~~l~~~~~~~~~---------~v~~~~sGseA~~~Aik~a~~~~~~~---g~~------~~~~vi~~~~~yH 157 (476)
T 3i5t_A 96 TSPAARLAEKIATLTPGDLN---------RIFFTTGGSTAVDSALRFSEFYNNVL---GRP------QKKRIIVRYDGYH 157 (476)
T ss_dssp CHHHHHHHHHHHTTSSTTCC---------EEEEESSHHHHHHHHHHHHHHHHHHT---TCT------TCCEEEEETTCCC
T ss_pred CHHHHHHHHHHHhcCCCCcC---------EEEEeCchHHHHHHHHHHHHHHHHhc---CCC------CCCEEEEEcCCcC
Confidence 45677788899998865432 57999999999999999998764321 100 01244444443
Q ss_pred chHHHHHHhccC------------CeEEeeC-CC--C-ccC--------hhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 206 TELEVVMLDWLG------------KMLDLPK-EF--L-ACS--------GGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 206 ~s~~kaa~~~g~------------~v~~v~~-~~--g-~~d--------~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
.+..-+..+.+. .+..++. .. . ..| +++|++.|++ .. ...+.+|++......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~--~~--~~~~aavi~ep~~~~ 233 (476)
T 3i5t_A 158 GSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIES--LG--PDTIAAFLAEPILAS 233 (476)
T ss_dssp CSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHH--HC--GGGEEEEEECSSBTT
T ss_pred cCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHh--cC--CCCEEEEEECCccCC
Confidence 111222222221 2344443 11 1 122 7789888864 21 125678888877888
Q ss_pred CccccC----HHHHHHHHhhcCceEEechhcccccccCcccccc-ccCccccceeeecCCcccccc-ccceeEEecChhh
Q psy9807 262 CCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYL-MKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSW 335 (561)
Q Consensus 262 tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~-~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~ 335 (561)
+|.+-| |++|.++|++||++|++|.+|.+.......+... ..++ ..|.+++ .|+++.. ...|+++.++ +.
T Consensus 234 ~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~--sK~l~~G~~plg~v~~~~-~i 309 (476)
T 3i5t_A 234 GGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITF--AKGVTSGYVPLGGLAISE-AV 309 (476)
T ss_dssp TTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEE--CGGGGTTSSCCEEEEECH-HH
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhh--hhhhcCCCcCeEEEEECH-HH
Confidence 888766 9999999999999999999998643322211111 1122 3577765 4999865 4667777743 32
Q ss_pred HHHhhccC----CCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCC---
Q psy9807 336 VVNAFNVD----PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD--- 408 (561)
Q Consensus 336 l~~~~~~~----~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~--- 408 (561)
. ..+... ..+.. ..+-....+...+++..+....-++++++..++.+++++.|+++.
T Consensus 310 ~-~~~~~~~~~~~~~~~---------------~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~ 373 (476)
T 3i5t_A 310 L-ARISGENAKGSWFTN---------------GYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLP 373 (476)
T ss_dssp H-HTTSGGGCTTCEECC---------------CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTST
T ss_pred H-HHHhcCCcccccccc---------------cCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 2 223211 00100 011112344444444444321124567777888888888887643
Q ss_pred CeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcce
Q psy9807 409 RFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 488 (561)
Q Consensus 409 g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v 488 (561)
.+..+. ....++.+.+.+.. ... .
T Consensus 374 ~v~~v~-~~G~~~~i~~~~~~--~~~-----------------------------------------------------~ 397 (476)
T 3i5t_A 374 GVAETR-SVGLVGCVQCLLDP--TRA-----------------------------------------------------D 397 (476)
T ss_dssp TEEEEE-EETTEEEEEECCC------------------------------------------------------------
T ss_pred CeEEEE-ecCceeEEEEecCc--ccc-----------------------------------------------------c
Confidence 222221 12223233222100 000 0
Q ss_pred eeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 489 CFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 489 ~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
.| .+.......+.+.+.+.|.++ .+. | .++|++.. ...++++++++++.|+++.+++.++
T Consensus 398 ~~--~~~~~~~~~~~~~l~~~Gv~v-~~~---g-~~iRi~p~-l~~t~e~i~~~l~~l~~~l~~~~~~ 457 (476)
T 3i5t_A 398 GT--AEDKAFTLKIDERCFELGLIV-RPL---G-DLCVISPP-LIISRAQIDEMVAIMRQAITEVSAA 457 (476)
T ss_dssp CC--HHHHHHHHHHHHHHHHTTEEC-EEE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc--cchhHHHHHHHHHHHHCCCEE-Eec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000113457788888887544 332 3 58999744 4668899999999999998877643
No 203
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.58 E-value=7.1e-13 Score=140.78 Aligned_cols=319 Identities=13% Similarity=0.045 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
.+...++.+++++.++.+. ..+||+|||+||..|+.+++...... +.+ ..+++++....
T Consensus 90 ~~~~~~la~~l~~~~~~~~----------~v~~~~ggseA~~~al~~~~~~~~~~---g~~------~~~~vi~~~~~yh 150 (452)
T 3n5m_A 90 HEPAIKLAEKLNEWLGGEY----------VIFFSNSGSEANETAFKIARQYYAQK---GEP------HRYKFMSRYRGYH 150 (452)
T ss_dssp EHHHHHHHHHHHHHHTSCE----------EEEEESSHHHHHHHHHHHHHHHHHTT---TCT------TCCEEEEETTCCC
T ss_pred CHHHHHHHHHHHHhCCCCc----------eEEEeCchHHHHHHHHHHHHHHHHhc---CCC------CCCEEEEECCCcC
Confidence 4566778888999887653 26999999999999999987542110 000 02245544443
Q ss_pred chHHHHHHhccC------------CeEEeeC-CCCc---cC---------hhhHHHHHhhhchhhcCCceEEEEEecC-C
Q psy9807 206 TELEVVMLDWLG------------KMLDLPK-EFLA---CS---------GGKGGGVIQRKSDREMCSDLLQVVATLG-T 259 (561)
Q Consensus 206 ~s~~kaa~~~g~------------~v~~v~~-~~g~---~d---------~~~Le~~i~~~~~~~~g~~p~~vv~t~g-t 259 (561)
.....+..+.+. .+..++. ...+ .| +++|+++|++ . .+..+.+|++... .
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~--~--~~~~~~~vi~ep~~~ 226 (452)
T 3n5m_A 151 GNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTW--E--LSETIAAFIMEPIIT 226 (452)
T ss_dssp CSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHH--H--CGGGEEEEEECSSBT
T ss_pred CCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHh--c--CCCCEEEEEEccccC
Confidence 111222222221 2344443 2111 12 7899999872 1 1125667777776 6
Q ss_pred CCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChh
Q psy9807 260 TNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPS 334 (561)
Q Consensus 260 t~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~ 334 (561)
+ +|.+-| +++|+++|++||+++++|.+|.+.......+.....++ ..|.+++ .|.++.. ...|.++.++ +
T Consensus 227 n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~--sK~l~~G~~~ig~~~~~~-~ 301 (452)
T 3n5m_A 227 G-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDIITM--AKGITSAYLPLSATAVKR-E 301 (452)
T ss_dssp T-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEE--CGGGGTTSSCCEEEEEEH-H
T ss_pred C-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCEEee--cccccCCCcceEEEEECH-H
Confidence 7 998887 99999999999999999999886432221111111122 2476664 5888765 5678777743 2
Q ss_pred hHHHhhcc---CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc----C
Q psy9807 335 WVVNAFNV---DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS----D 407 (561)
Q Consensus 335 ~l~~~~~~---~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~ 407 (561)
.. ..+.. ...++.. .+-....+...+++..+....-++++++..++.+++++.|++ .
T Consensus 302 i~-~~~~~~~~~~~~~~~---------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 365 (452)
T 3n5m_A 302 IY-EAFKGKGEYEFFRHI---------------NTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEH 365 (452)
T ss_dssp HH-GGGCSSSTTCSCCCC---------------CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HH-HHHhhccCCCCcccc---------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 22 32321 1111110 111123344444444433211234556666666677666654 3
Q ss_pred CCeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcc
Q psy9807 408 DRFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 487 (561)
Q Consensus 408 ~g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~ 487 (561)
|.+..+. .....+.|.+.+.. .. .
T Consensus 366 ~~~~~~~-~~g~~~~i~~~~~~--~~-----------------------------------------------------~ 389 (452)
T 3n5m_A 366 PLVGDIR-GKGLLVGIELVNDK--ET-----------------------------------------------------K 389 (452)
T ss_dssp TTEEEEE-ESSSCEEEEEEEET--TT-----------------------------------------------------T
T ss_pred CCeEEEE-EEEEEEEEEEecCC--cc-----------------------------------------------------c
Confidence 4443322 22222223221100 00 0
Q ss_pred eeeecCCCcHHHHHHHHHHHhCCcEEEEee--eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 488 VCFRLKGPNEINEKLLKRINGNGKIHLVPS--KIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 488 v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
..| ......++.+.+.+.|.++.... ...+..++|+++. ...++++++++++.|+++.+
T Consensus 390 ~~~----~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 390 EPI----DNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPP-LVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp EEC----CHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCC-TTCCHHHHHHHHHHHHHHHT
T ss_pred CCC----CHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 000 11223467888888885544322 1123568999855 45688999999999988754
No 204
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.58 E-value=2.6e-13 Score=143.24 Aligned_cols=311 Identities=11% Similarity=0.009 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
....++.+.+++.+|.+.+ ..+||+|||+||..++.+++... . .+++++.... .
T Consensus 85 ~~~~~l~~~la~~~~~~~~---------~v~~~~gg~ea~~~a~~~~~~~~--~-------------~~~vi~~~~~yhg 140 (433)
T 1zod_A 85 RPVVDLATRLANITPPGLD---------RALLLSTGAESNEAAIRMAKLVT--G-------------KYEIVGFAQSWHG 140 (433)
T ss_dssp HHHHHHHHHHHHHSCTTCC---------EEEEESCHHHHHHHHHHHHHHHH--T-------------CCEEEEETTCCCC
T ss_pred HHHHHHHHHHHHhCCCCcC---------EEEEeCchHHHHHHHHHHHHHhh--C-------------CCeEEEECCCcCC
Confidence 3455666677888876533 57999999999999988776421 0 1245544433 2
Q ss_pred hHHHHHHhcc-----------CCeEEeeC-CC------------CccChhhHHHHHhhhchhhcCCceEEEEEecCCCCC
Q psy9807 207 ELEVVMLDWL-----------GKMLDLPK-EF------------LACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC 262 (561)
Q Consensus 207 s~~kaa~~~g-----------~~v~~v~~-~~------------g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t 262 (561)
+..-+....+ ..++.++. .. +.+|+++|+++|++ . .+..+.+|+++...+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~--~~~~~~~vi~~p~~~~~ 216 (433)
T 1zod_A 141 MTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDR--Q--SSGNLAAFIAEPILSSG 216 (433)
T ss_dssp SSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHH--H--CCSCEEEEEECSEETTT
T ss_pred CChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHh--c--CCCCeEEEEEccccCCC
Confidence 2222222211 24555554 21 12468999999865 2 11245666666555668
Q ss_pred ccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHH
Q psy9807 263 CAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVN 338 (561)
Q Consensus 263 G~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~ 338 (561)
|.+-| +++|+++|++||+++++|.+|++.............++ ..|.+ ++.|+++.....|+++.++ +...
T Consensus 217 G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~-~~di~--s~sK~~~~G~~ig~~~~~~-~~~~- 291 (433)
T 1zod_A 217 GIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDIL--TLSKTLGAGLPLAAIVTSA-AIEE- 291 (433)
T ss_dssp TCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEE--EECHHHHTTSSCEEEEECH-HHHH-
T ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-CCCEE--EecccccCCCCeeEEEEhH-HHHH-
Confidence 97766 99999999999999999999986432221111001122 24665 4569998767789888854 3332
Q ss_pred hhccCCCccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC----CCeE
Q psy9807 339 AFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD----DRFE 411 (561)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~g~~ 411 (561)
.+... .+... . +-....+... .+++.+.. +++.++..++.+++.+.|+++ |.+.
T Consensus 292 ~~~~~-~~~~~----~-----------t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 352 (433)
T 1zod_A 292 RAHEL-GYLFY----T-----------THVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLRRGLLDLMERFDCIG 352 (433)
T ss_dssp HHHHT-TCCCC----C-----------TTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred hhccC-CCCCC----C-----------CCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 22211 11100 0 0011223333 33333322 235566677777887777653 4332
Q ss_pred EeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeee
Q psy9807 412 VIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 491 (561)
Q Consensus 412 l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~ 491 (561)
.. ++....+.+++.+.. . .+ .
T Consensus 353 ~~-~~~g~~~~i~~~~~~-~-----------------------------------------------------~~-~--- 373 (433)
T 1zod_A 353 DV-RGRGLLLGVEIVKDR-R-----------------------------------------------------TK-E--- 373 (433)
T ss_dssp EE-EEETTEEEEEEEEET-T-----------------------------------------------------TT-E---
T ss_pred EE-EEEEEEEEEEEecCc-c-----------------------------------------------------cc-C---
Confidence 22 223333333322100 0 00 0
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 492 LKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 492 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
+......++.+.|.+.|..+.......+..++|+++. ..+++++++++++.|+++.+++
T Consensus 374 --~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~-~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 374 --PADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPP-LTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp --ECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred --CChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECC-cCCCHHHHHHHHHHHHHHHHHh
Confidence 0012245678888888754433222122368999754 4668899999999999887654
No 205
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.58 E-value=7.1e-13 Score=141.16 Aligned_cols=322 Identities=11% Similarity=-0.057 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
.+...++.+|+++.++.+.+ ..+|++|||+||..|+.+++...... +.+ ...++++....
T Consensus 93 ~~~~~~la~~l~~~~~~~~~---------~v~~~~ggseA~~~al~~~~~~~~~~---g~~------~~~~vi~~~~~yh 154 (459)
T 4a6r_A 93 HPAVVELSSLLAEVTPAGFD---------RVFYTNSGSESVDTMIRMVRRYWDVQ---GKP------EKKTLIGRWNGYH 154 (459)
T ss_dssp CHHHHHHHHHHHHHSCTTCC---------EEEEESSHHHHHHHHHHHHHHHHHHT---TCT------TCCEEEEETTCCC
T ss_pred CHHHHHHHHHHHHhCCCCCC---------EEEEeCchHHHHHHHHHHHHHHHHhc---CCC------CCCEEEEECCCcC
Confidence 45667778899998876433 57999999999999999988753211 000 01234444333
Q ss_pred -chHHHHHHhcc------------CCeEEeeC-C-----CCccC--------hhhHHHHHhhhchhhcCCceEEEEEecC
Q psy9807 206 -TELEVVMLDWL------------GKMLDLPK-E-----FLACS--------GGKGGGVIQRKSDREMCSDLLQVVATLG 258 (561)
Q Consensus 206 -~s~~kaa~~~g------------~~v~~v~~-~-----~g~~d--------~~~Le~~i~~~~~~~~g~~p~~vv~t~g 258 (561)
+... +..+.+ ..+..++. . +. +| +++|++.|.+ .. ...+.+|++.-.
T Consensus 155 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~--~~--~~~~~~vi~ep~ 228 (459)
T 4a6r_A 155 GSTIG-GASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILE--IG--ADKVAAFVGEPI 228 (459)
T ss_dssp CSSHH-HHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHH--HC--GGGEEEEEECSS
T ss_pred CccHH-HHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHH--cC--CCCEEEEEECCc
Confidence 2221 222222 13445553 1 12 45 7888888864 21 125677888777
Q ss_pred CCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecCh
Q psy9807 259 TTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDP 333 (561)
Q Consensus 259 tt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~ 333 (561)
.+.+|.+.| +++|+++|++||+++++|.+|.+.......+.....++ ..|.+++ .|.++.. ...|+++.++
T Consensus 229 ~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~pdi~t~--sK~l~gg~~~lg~v~~~~- 304 (459)
T 4a6r_A 229 QGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QPDLFTA--AKGLSSGYLPIGAVFVGK- 304 (459)
T ss_dssp BTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSSCCEEEEECH-
T ss_pred cCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeeh--hhhhcCCCCCccceeeCH-
Confidence 788888888 99999999999999999999886433221111111122 3477765 5998765 4678777743
Q ss_pred hhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHH-HHHHHHHHHH----hcCC
Q psy9807 334 SWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQI-SLAKEFEQLV----RSDD 408 (561)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~-~la~~l~~~l----~~~~ 408 (561)
+... .+.....+... .+-....+...+++..+....-++++++.. ++.+++++.| .+.|
T Consensus 305 ~i~~-~~~~~~~~~~~---------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 368 (459)
T 4a6r_A 305 RVAE-GLIAGGDFNHG---------------FTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFE 368 (459)
T ss_dssp HHHH-HHHHHCTTHHH---------------HHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCT
T ss_pred HHHH-HhhcCCCcccC---------------CCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3322 22110011000 000112333333343333111133445555 5555555555 4444
Q ss_pred CeEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcce
Q psy9807 409 RFEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 488 (561)
Q Consensus 409 g~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v 488 (561)
.+..+. .....+.|.+.+.. ..+ .
T Consensus 369 ~~~~~~-~~g~~~~~~~~~~~--~~~-----------------------------------------------------~ 392 (459)
T 4a6r_A 369 HVDDVR-GVGMVQAFTLVKNK--AKR-----------------------------------------------------E 392 (459)
T ss_dssp TEEEEE-EETTEEEEEECSBT--TTT-----------------------------------------------------B
T ss_pred CeEEEE-EEEEEEEEEEecCc--ccc-----------------------------------------------------c
Confidence 443332 22333334332100 000 0
Q ss_pred eeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9807 489 CFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKEE 557 (561)
Q Consensus 489 ~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~~ 557 (561)
.+.+.......+.+.+.+.|.++... | .++|+++. ...+++++++++++|+++.+++.+..
T Consensus 393 --~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~~~~~ 453 (459)
T 4a6r_A 393 --LFPDFGEIGTLCRDIFFRNNLIMRAC----G-DHIVSAPP-LVMTRAEVDEMLAVAERCLEEFEQTL 453 (459)
T ss_dssp --CCSSTTHHHHHHHHHHHHTTEECEEE----T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cccchHHHHHHHHHHHHHCCeEEecC----C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 01122334567888898888554332 2 58999844 56688999999999999988776543
No 206
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.58 E-value=2.5e-13 Score=143.47 Aligned_cols=308 Identities=13% Similarity=0.059 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch-
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE- 207 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s- 207 (561)
...++.+++++.++ .. ...+|++|||+||..|+.+++... + .+++++.... +.
T Consensus 96 ~~~~l~~~la~~~~-~~---------~~v~~~~sGsea~~~ai~~a~~~~------~---------~~~vi~~~~~yhg~ 150 (434)
T 3l44_A 96 LEVKFAKMLKEAMP-AL---------DKVRFVNSGTEAVMTTIRVARAYT------G---------RTKIMKFAGCYHGH 150 (434)
T ss_dssp HHHHHHHHHHHHCT-TC---------SEEEEESSHHHHHHHHHHHHHHHH------C---------CCEEEEETTCCCCS
T ss_pred HHHHHHHHHHHhCC-CC---------CEEEEeCchHHHHHHHHHHHHHhh------C---------CCEEEEEcCccCCC
Confidence 44555667777775 22 257999999999999999887541 0 1234443332 11
Q ss_pred HHHHHHhccC-------------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC-
Q psy9807 208 LEVVMLDWLG-------------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC- 267 (561)
Q Consensus 208 ~~kaa~~~g~-------------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp- 267 (561)
...+....+. .+..+| ..|+++|+++|++ .. ..+.+|++......+|.+.|
T Consensus 151 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~le~~l~~--~~---~~~~~vi~ep~~~~~G~~~~~ 221 (434)
T 3l44_A 151 SDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVP----FNNVETLKEALDK--WG---HEVAAILVEPIVGNFGIVEPK 221 (434)
T ss_dssp SGGGGBC-------CCCBSSTTCCHHHHTTEEEEC----TTCHHHHHHHHHH--HG---GGEEEEEECSSBCTTSCBCCC
T ss_pred cHHHHhhcCCcccccCCCCcCCCCCcCCCceEecC----cccHHHHHHHHHh--CC---CCEEEEEEcCCCCCCCCccCC
Confidence 1111111111 233333 2389999999975 21 14667777777777899988
Q ss_pred ---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCC
Q psy9807 268 ---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDP 344 (561)
Q Consensus 268 ---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~ 344 (561)
+++|.++|++||+++++|.+|.+. ...........++ ..|.++ +.|.++++...|.++.+ ++... .+....
T Consensus 222 ~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~-~~di~t--~sK~~~~G~~iG~~~~~-~~i~~-~~~~~~ 295 (434)
T 3l44_A 222 PGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGV-TPDLTA--LGKVIGGGLPIGAYGGK-KEIME-QVAPLG 295 (434)
T ss_dssp TTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTC-CCSEEE--EEGGGGTTSSCEEEEEC-HHHHT-TBTTTS
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCC-CCCeee--hhhhhcCCcCeeeEEEc-HHHHH-hhccCC
Confidence 999999999999999999999865 2221111111122 246655 46999887888988664 33332 221110
Q ss_pred CccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEeccccccc
Q psy9807 345 LYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD----DRFEVIYEVLMGL 420 (561)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~g~~l~~~~~~~~ 420 (561)
.... ..+-....+...+++..+....-++++++..++.+++++.|++. +.+.. .+....+
T Consensus 296 ~~~~---------------~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~g~~ 359 (434)
T 3l44_A 296 PAYQ---------------AGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDIT-LNRLKGA 359 (434)
T ss_dssp SBCC---------------CCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEE-EEEETTE
T ss_pred Cccc---------------CCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEE-EEeeccE
Confidence 0000 00111233333333333321111455666677777777777653 22111 1223334
Q ss_pred eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHH
Q psy9807 421 VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINE 500 (561)
Q Consensus 421 v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~ 500 (561)
+.+.+.+.... .... . . .+......
T Consensus 360 ~~~~~~~~~~~---~~~~-----------------------------------------~----------~-~~~~~~~~ 384 (434)
T 3l44_A 360 LTVYFTTNTIE---DYDA-----------------------------------------A----------Q-DTDGEMFG 384 (434)
T ss_dssp EEEEESSSCCC---SHHH-----------------------------------------H----------H-HSCHHHHH
T ss_pred EEEEEecCccc---chhh-----------------------------------------c----------c-ccCHHHHH
Confidence 44433211000 0000 0 0 01223345
Q ss_pred HHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 501 KLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 501 ~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
++.+.|.++|.++ .+. +...+|++ ..++++|+++++++|+++.+++.+
T Consensus 385 ~~~~~l~~~Gv~v-~~~---~~~~~rl~---~~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 385 KFFKLMLQEGVNL-APS---KYEAWFLT---TEHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp HHHHHHHHTTEEC-CSS---TTCCEECC---TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEE-eec---CCCcEEEe---cccCHHHHHHHHHHHHHHHHHHHh
Confidence 6788888887443 332 22357764 456889999999999998877543
No 207
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.58 E-value=3.5e-13 Score=141.88 Aligned_cols=185 Identities=10% Similarity=-0.046 Sum_probs=110.3
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHH-HHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATL-VALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl-~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
|.......++.+.+.+| +|.+++ ..++|+|++++++ ..+..+... ... .+...-..+...++
T Consensus 72 Y~~~~G~~~lr~~ia~~----~~~~~~---------~i~~t~G~~~al~l~~~~~~l~~---~~~-~g~~~~~~~d~~~V 134 (422)
T 3d6k_A 72 YGGLLGIADIRELWAEA----LGLPAD---------LVVAQDGSSLNIMFDLISWSYTW---GNN-DSSRPWSAEEKVKW 134 (422)
T ss_dssp SCCSSCCHHHHHHHHHH----HTCCGG---------GEEECSSCHHHHHHHHHHHHHHH---CCT-TCSSCGGGSSCCEE
T ss_pred CCCCCCCHHHHHHHHHH----hCCChh---------HEEEecchHHHHHHHHHHHHhcC---ccc-ccccccccCCCCEE
Confidence 43333345566655555 477654 5789999998863 222221111 000 00000000001134
Q ss_pred EEeccc-chHHHHHHhccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEE-EecCCCCCccccCHH---HHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVV-ATLGTTNCCAFDCLE---EIGQ 273 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv-~t~gtt~tG~idpl~---eI~~ 273 (561)
++.... .....+++..|.+++.+|. .++ +|+++|++++.+ . .+.+|+ .+...+.||.+-|.+ +|++
T Consensus 135 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~--~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 206 (422)
T 3d6k_A 135 LCPVPGYDRHFTITEHFGFEMINVPMTDEG-PDMGVVRELVKD--P-----QVKGMWTVPVFGNPTGVTFSEQTCRELAE 206 (422)
T ss_dssp EEEESCCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHTS--T-----TEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred EEeCCccHHHHHHHHHcCCEEEecCCCCCC-CCHHHHHHHHhc--C-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHH
Confidence 444444 5566677788999999998 654 999999999864 2 355666 567788899998876 8888
Q ss_pred HHh-hcCceEEechhccc-ccccCc-cccccc-----cCccccceeeecCCcccccc-ccceeEEec
Q psy9807 274 VCR-QKDVWLHVDAAYAG-SAFICP-ENRYLM-----KGVELADSFNFNPHKWMLVT-FDCSAMWLK 331 (561)
Q Consensus 274 ia~-~~~~~lhVDaA~gg-~~~~~~-~~~~~~-----~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r 331 (561)
+|+ +||+++++|.+|+. .+.... ...... .+....+.+..+++|+ +.| ..+|+++.+
T Consensus 207 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~ 272 (422)
T 3d6k_A 207 MSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASS 272 (422)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECC
T ss_pred HHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeC
Confidence 888 99999999999973 221111 111110 0112236788899998 445 357888875
No 208
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.58 E-value=2.4e-13 Score=144.65 Aligned_cols=307 Identities=11% Similarity=0.003 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--c
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--T 206 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--~ 206 (561)
+...++.++++++++.+.+ ..+|++|||+||..|+.+++.....+ +.+ ...++++.... .
T Consensus 118 ~~~~~L~e~la~~~~~~~~---------~v~~~~sGseA~~~Alk~a~~~~~~~---g~~------g~~~ii~~~~~yhg 179 (457)
T 3tfu_A 118 EPAARLAKLLVDITPAGLD---------TVFFSDSGSVSVEVAAKMALQYWRGR---GLP------GKRRLMTWRGGYHG 179 (457)
T ss_dssp HHHHHHHHHHHHHSSTTEE---------EEEEESSHHHHHHHHHHHHHHHHHHT---TCT------TCCEEEEETTCCCC
T ss_pred HHHHHHHHHHHHhCCCCcC---------EEEEeCcHHHHHHHHHHHHHHHHHhc---CCC------CCceEEEEcCCcCC
Confidence 4455677788888875543 57999999999999999988653221 001 01234433222 1
Q ss_pred hHHHHHHh-------------ccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEec-CCCCCccccC--
Q psy9807 207 ELEVVMLD-------------WLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATL-GTTNCCAFDC-- 267 (561)
Q Consensus 207 s~~kaa~~-------------~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~-gtt~tG~idp-- 267 (561)
+..-+..+ ....+..+|. .....|+++|+++|++ . +..+.+|++.. ....+|.+-|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~--~---~~~~aavi~ep~~~~~~G~~~~~~ 254 (457)
T 3tfu_A 180 DTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQ--H---AGELAAVVVEPVVQGAGGMRFHDP 254 (457)
T ss_dssp SSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHH--H---GGGEEEEEECSSEECTTTCEECCT
T ss_pred ccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHh--C---CCCEEEEEEeCCCcCCCCcccCCH
Confidence 11111111 1123444444 3345789999999975 2 12567777777 6778888876
Q ss_pred --HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhcc-C
Q psy9807 268 --LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNV-D 343 (561)
Q Consensus 268 --l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~-~ 343 (561)
+++|.++|++||+++++|.+|.+.......+.....++ ..|.+ ++.|.|++.+ ..|+++.++. .. ..+.. .
T Consensus 255 ~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~-~pdii--t~sK~l~gG~~~lG~v~~~~~-i~-~~~~~~~ 329 (457)
T 3tfu_A 255 RYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGV-SPDIM--CVGKALTGGYLSLAATLCTAD-VA-HTISAGA 329 (457)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEE--EECGGGGTTSSCCEEEEEEHH-HH-HHHHHSS
T ss_pred HHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCC-CceEE--EEChhhhCCCcceEEEEEcHH-HH-HHhhccC
Confidence 99999999999999999999886432221111011122 35777 4469988753 6787777543 22 22321 1
Q ss_pred C-CccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecccccc
Q psy9807 344 P-LYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD---DRFEVIYEVLMG 419 (561)
Q Consensus 344 ~-~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~g~~l~~~~~~~ 419 (561)
+ .+... .+-....+...+++..+....-+++.++..++.+++++.|+++ |++..+. ....
T Consensus 330 ~~~~~~~---------------~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr-~~G~ 393 (457)
T 3tfu_A 330 AGALMHG---------------PTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDVR-VCGA 393 (457)
T ss_dssp SCSCCCC---------------CTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEEE-ECSS
T ss_pred CCceeEe---------------cCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeeee-cCCe
Confidence 1 11100 0111233444444444332112356677778888888888864 3332211 1222
Q ss_pred ceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHH
Q psy9807 420 LVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEIN 499 (561)
Q Consensus 420 ~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~ 499 (561)
++.|. +.... ..
T Consensus 394 ~~~i~-------------------------------------------------------------------l~~~~-~~ 405 (457)
T 3tfu_A 394 IGVIE-------------------------------------------------------------------CDRPV-DL 405 (457)
T ss_dssp CEEEE-------------------------------------------------------------------ESSCC-CH
T ss_pred EEEEE-------------------------------------------------------------------ECCcc-cH
Confidence 22222 11110 13
Q ss_pred HHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 500 EKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 500 ~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.++.++|.+.|.+. .+. + .++|++.. ...+++|+++++++|+++.+++
T Consensus 406 ~~~~~~l~~~Gv~v-~~~---~-~~lRi~p~-~~~t~eei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 406 AVATPAALDRGVWL-RPF---R-NLVYAMPP-YICTPAEITQITSAMVEVARLV 453 (457)
T ss_dssp HHHHHHHHHTTEEC-CCB---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCeEE-Eec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 57888888887543 332 2 48998744 4568899999999999887654
No 209
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.58 E-value=5.4e-14 Score=146.38 Aligned_cols=238 Identities=10% Similarity=-0.057 Sum_probs=146.8
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCC--CccccccCCCCCCeEE--eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy9807 120 TWIASPACTELEVVMLDWLGKMLDL--PKEFLACSGGKGGGVI--QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDI 195 (561)
Q Consensus 120 ~~~~sp~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~~~g~~--t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~ 195 (561)
.|...+...++.+.+.+|+.+..+. ++ ...++ |+|||+|+..++.+++.. .+
T Consensus 64 ~y~~~~g~~~lr~~la~~~~~~~~~~~~~---------~~v~~~~~~g~~~a~~~~~~~~~~~--------~~------- 119 (396)
T 2q7w_A 64 NYLGIDGIPEFGRCTQELLFGKGSALIND---------KRARTAQTPGGTGALRVAADFLAKN--------TS------- 119 (396)
T ss_dssp CCCCTTCCHHHHHHHHHHHHCTTCHHHHT---------TCEEEEEESHHHHHHHHHHHHHHHH--------SC-------
T ss_pred CCCCCCCCHHHHHHHHHHHhcCCCCcccc---------ccEEEEecccchhhHHHHHHHHHHh--------CC-------
Confidence 3444455677888888887544222 12 24566 999999998877654321 00
Q ss_pred ccceEEeccc-chHHHHHHhccCCeEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---H
Q psy9807 196 IANLIASPAC-TELEVVMLDWLGKMLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---L 268 (561)
Q Consensus 196 ~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l 268 (561)
++++++.... .+...+++..|.+++.+|. +++.+|+++|++++++ . ...+.+++.+...+.||.+-| +
T Consensus 120 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~---~~~~~~v~~~~p~nptG~~~~~~~l 194 (396)
T 2q7w_A 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNE--A---QAGDVVLFHGCCHNPTGIDPTLEQW 194 (396)
T ss_dssp CCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTT--C---CTTCEEEEECSSCTTTCCCCCHHHH
T ss_pred CCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHh--C---CCCCEEEEeCCCCCCCCCCCCHHHH
Confidence 2345554444 6777777888999999998 5788999999999975 2 113566777888888998854 6
Q ss_pred HHHHHHHhhcCceEEechhcccccccC--c--cccccccCccccceeeecCCccccccc-cceeEEe--cChhh---HHH
Q psy9807 269 EEIGQVCRQKDVWLHVDAAYAGSAFIC--P--ENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWL--KDPSW---VVN 338 (561)
Q Consensus 269 ~eI~~ia~~~~~~lhVDaA~gg~~~~~--~--~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~--r~~~~---l~~ 338 (561)
++|+++|++||+++++|++|++...-. + .... +.....-+.+..++||+++.|. .+|.+++ +++.. +..
T Consensus 195 ~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~ 273 (396)
T 2q7w_A 195 QTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRA-FAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFS 273 (396)
T ss_dssp HHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHH-HHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEecccccccCCccchhHHHHH-HHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHH
Confidence 689999999999999999988643210 0 1111 1111112467889999887432 2688876 34421 211
Q ss_pred hhcc--CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhh--------HHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 339 AFNV--DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLG--------VKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 339 ~~~~--~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g--------~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
.+.. ...|. . ...+..+++.+.+. .+.++++.++..++.+++.+.|++.
T Consensus 274 ~~~~~~~~~~~-----------------~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (396)
T 2q7w_A 274 QMKAAIRANYS-----------------N---PPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEK 332 (396)
T ss_dssp HHHHHHHTTTS-----------------S---CCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhccC-----------------C---CCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1110 00110 0 12223333333332 2456677778888889999999886
No 210
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.57 E-value=2.7e-13 Score=144.03 Aligned_cols=310 Identities=10% Similarity=-0.000 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHhcC-CCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH-HHhcCCCCCCcccccceEEeccc-c
Q psy9807 130 LEVVMLDWLGKMLD-LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQR-VKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 130 lE~~~~~~la~l~g-~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~-~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
...++.+.++++++ .+. ...+|++|||+||..|+.+++.....+ ...+.+ . ..++++++.... +
T Consensus 102 ~~~~la~~la~~~~~~~~---------~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~---~-~~~~~Vi~~~~~yh 168 (449)
T 2cjg_A 102 AMARFVETFARVLGDPAL---------PHLFFVEGGALAVENALKAAFDWKSRHNQAHGID---P-ALGTQVLHLRGAFH 168 (449)
T ss_dssp HHHHHHHHHHHHHCCTTC---------CEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSC---T-TCCCEEEEETTCCC
T ss_pred HHHHHHHHHHHhcCCCCC---------CEEEEeCchHHHHHHHHHHHHHHhcccccccccc---c-CCCCEEEEECCCcC
Confidence 34455556666665 222 257999999999999998887432110 000000 0 001245555433 1
Q ss_pred h-HHHHHHhcc-------------CCeEEeeCCC---C--------ccChhhHHHHHhhhchhhcCCceEEEEEecCCCC
Q psy9807 207 E-LEVVMLDWL-------------GKMLDLPKEF---L--------ACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTN 261 (561)
Q Consensus 207 s-~~kaa~~~g-------------~~v~~v~~~~---g--------~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~ 261 (561)
. ..-+..+.+ ..+..+|.++ . ..++++|+++|++ . +..+.+|+++...+.
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~--~---~~~~~~vi~ep~~~~ 243 (449)
T 2cjg_A 169 GRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFET--R---PHDIACFVAEPIQGE 243 (449)
T ss_dssp CSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH--S---TTTEEEEEECSEETT
T ss_pred CcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHh--c---CCceEEEEEeCcCCC
Confidence 1 111111111 2456666522 1 2566778888864 1 125677777777777
Q ss_pred CccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHH
Q psy9807 262 CCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVV 337 (561)
Q Consensus 262 tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~ 337 (561)
+|.+-| +++|+++|++||+++++|.+|++.......+.....++ ..|.+++ .|++ | .|.++.++ +...
T Consensus 244 ~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~~di~t~--sK~l--~--iG~~~~~~-~~~~ 315 (449)
T 2cjg_A 244 GGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV-APDIVAF--GKKT--Q--VCGVMAGR-RVDE 315 (449)
T ss_dssp TTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGG--S--SEEEEECG-GGGG
T ss_pred CCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCC-CceEEEe--cCcc--c--EEEEEECH-HHhh
Confidence 898777 99999999999999999999986432221111111122 3477654 5998 4 67777754 3221
Q ss_pred HhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC----CC-eEE
Q psy9807 338 NAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD----DR-FEV 412 (561)
Q Consensus 338 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~g-~~l 412 (561)
.+. +.++.....+ .+-....+...+++..+....-+++.++..++.+++.+.|+++ |. +..
T Consensus 316 -~l~--~~~~~~~~~~-----------~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~ 381 (449)
T 2cjg_A 316 -VAD--NVFAVPSRLN-----------STWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLD 381 (449)
T ss_dssp -STT--CTTTSTTSSC-----------CSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEE
T ss_pred -hhh--hcccCCcccc-----------cCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceee
Confidence 110 0010000000 0001123333333333321111345677778888888888753 43 322
Q ss_pred eccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeec
Q psy9807 413 IYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL 492 (561)
Q Consensus 413 ~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~ 492 (561)
.. +...++.|++
T Consensus 382 ~~-~~g~~~~~~~------------------------------------------------------------------- 393 (449)
T 2cjg_A 382 PR-GRGLMCAFSL------------------------------------------------------------------- 393 (449)
T ss_dssp EE-EETTEEEEEC-------------------------------------------------------------------
T ss_pred Ee-eccEEEEEEE-------------------------------------------------------------------
Confidence 21 2223323322
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q psy9807 493 KGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEEL 553 (561)
Q Consensus 493 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~ 553 (561)
.+ .....++.+.|.+.|.+. .+. |..++|+++. ..++++|++++++.|+++.+++
T Consensus 394 ~~-~~~~~~~~~~l~~~Gv~v-~~~---g~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 394 PT-TADRDELIRQLWQRAVIV-LPA---GADTVRFRPP-LTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp SS-HHHHHHHHHHHHHTTEEC-EEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CC-hHHHHHHHHHHHHCCeEE-ecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 11 112456788888877443 332 3468999744 5678999999999999887653
No 211
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.57 E-value=5.8e-14 Score=146.68 Aligned_cols=303 Identities=9% Similarity=-0.063 Sum_probs=169.8
Q ss_pred cccChhhHHHHHHHHHHHHHhcC-CCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccce
Q psy9807 121 WIASPACTELEVVMLDWLGKMLD-LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 199 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 199 (561)
|...+...++++.+.+|+. .| .+++ ..++|+|+|+++..++.. +. + ++++
T Consensus 71 y~~~~g~~~lr~~la~~l~--~g~~~~~---------~v~~~~G~~~al~~~~~~-----~~------~-------gd~V 121 (400)
T 3asa_A 71 YGPDFGLPALRQKLSEDFY--RGFVDAK---------EIFISDGAKVDLFRLLSF-----FG------P-------NQTV 121 (400)
T ss_dssp CCCTTCCHHHHHHHHHTTS--TTSSCGG---------GEEEESCHHHHHHHHHHH-----HC------S-------SCEE
T ss_pred CCCCCCCHHHHHHHHHHHH--cCCCCHH---------HEEEccChHHHHHHHHHH-----cC------C-------CCEE
Confidence 4333345566666655543 46 4443 578999999987653221 10 0 2345
Q ss_pred EEeccc-chHHHHHHhccCC-eEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHH
Q psy9807 200 IASPAC-TELEVVMLDWLGK-MLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQ 273 (561)
Q Consensus 200 vv~~s~-~s~~kaa~~~g~~-v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ 273 (561)
++.... .+...++...|.+ ++.+|. +++.++.+ +++ + + .+.+|+++...+.||.+-| +++|++
T Consensus 122 l~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-l~~-~-~--------~~~~v~l~~p~nptG~~~~~~~l~~l~~ 190 (400)
T 3asa_A 122 AIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPE-FPE-D-T--------HIDILCLCSPNNPTGTVLNKDQLRAIVH 190 (400)
T ss_dssp EEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCC-CCT-T-C--------CCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHcCCcceEecccchhcCcccC-hhh-c-c--------CccEEEEeCCCCCCCCcCCHHHHHHHHH
Confidence 554444 5666677778888 999987 43333322 221 1 2 3556777778888999977 667889
Q ss_pred HHhhcCceEEechhcccccccCccccccccCcc---ccceeeecCCcccccc-ccceeEEecChhh------HHHhhccC
Q psy9807 274 VCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE---LADSFNFNPHKWMLVT-FDCSAMWLKDPSW------VVNAFNVD 343 (561)
Q Consensus 274 ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~---~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~------l~~~~~~~ 343 (561)
+|++||+++++|++|+.... .+.....+..++ ..+.+..+++|+++.| ..+|++++++... +.......
T Consensus 191 ~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~ 269 (400)
T 3asa_A 191 YAIEHEILILFDAAYSTFIS-DPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERF 269 (400)
T ss_dssp HHHHTTCEEEEECTTGGGCC-CTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHH
T ss_pred HHHHcCCEEEEEchhhhhhc-CCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHH
Confidence 99999999999999985432 111111121221 1247789999999744 3478887755321 22111100
Q ss_pred CCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeccccccceee
Q psy9807 344 PLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 423 (561)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~~~~~~~v~f 423 (561)
.... .. ....+...++...+....++++.++..++.+++.+.|++. ++++..+...+.+.+
T Consensus 270 ~~~~-----------------~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 330 (400)
T 3asa_A 270 LSTT-----------------FN-GASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLWV 330 (400)
T ss_dssp HHHH-----------------CC-CCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEEE
T ss_pred hccC-----------------cc-CCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEEE
Confidence 0000 00 0112222222333322246677788888999999999987 888765444444444
Q ss_pred e-cccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHH
Q psy9807 424 R-LKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKL 502 (561)
Q Consensus 424 ~-~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l 502 (561)
+ +.. +.+ ..++
T Consensus 331 ~~~~~------------------------------------------------------------------~~~--~~~~ 342 (400)
T 3asa_A 331 KPTQA------------------------------------------------------------------NIS--DRDL 342 (400)
T ss_dssp ECCCT------------------------------------------------------------------TCC--TTTH
T ss_pred eccCC------------------------------------------------------------------CCC--HHHH
Confidence 3 210 001 1246
Q ss_pred HHHHHhC-CcEEEEeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 503 LKRINGN-GKIHLVPSKI--RDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 503 ~~~L~~~-g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
.+.|.++ |.....+... .+..++|+++ .+++++++++++.|.++.++..
T Consensus 343 ~~~l~~~~gv~v~~g~~f~~~~~~~iRis~---~~~~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 343 FDFFLREYHIAITPGIGFGRSGSGFVRFSS---LGKREDILAACERLQMAPALQS 394 (400)
T ss_dssp HHHHHHHHSEECEEGGGGCGGGTTCEEEEC---CSCHHHHHHHHHHHHC------
T ss_pred HHHHHHhCCEEEeChhHhCCCCCCEEEEEe---eCCHHHHHHHHHHHHHHHHhhh
Confidence 6666654 5444332221 2345899983 4578999999999988776543
No 212
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.57 E-value=2.5e-13 Score=145.23 Aligned_cols=309 Identities=9% Similarity=-0.025 Sum_probs=167.4
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCC-----------Cccc
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWK-----------DSDI 195 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~-----------~~~~ 195 (561)
..++++++.+.++++++... ...+|++|||+||..|+.+++.....+.. +.+... ..+-
T Consensus 108 ~~~l~~~la~~l~~~~~~~~---------~~v~f~~sGseA~~~Aik~a~~~~~~~~~-~~~~~t~~~~~~~~~~~~~g~ 177 (472)
T 1ohv_A 108 PENFVEKLRESLLSVAPKGM---------SQLITMACGSCSNENAFKTIFMWYRSKER-GQSAFSKEELETCMINQAPGC 177 (472)
T ss_dssp BTTHHHHHHHTGGGGCCTTC---------CEEEEESSHHHHHHHHHHHHHHHHHHHHH-TTCCCCHHHHHHHHTTCTTTS
T ss_pred HHHHHHHHHHHHHHhCCCCc---------CEEEEeCCchhHHHHHHHHHHHHhhhhcc-CcccccccccccccccccccC
Confidence 35788888777777764322 25799999999999999998754311000 000000 0000
Q ss_pred -ccceEEeccc--chHHHHHHhccCC-----------eEEeeCC--CC-------------ccChhhHHHHHhhhchhhc
Q psy9807 196 -IANLIASPAC--TELEVVMLDWLGK-----------MLDLPKE--FL-------------ACSGGKGGGVIQRKSDREM 246 (561)
Q Consensus 196 -~~~~vv~~s~--~s~~kaa~~~g~~-----------v~~v~~~--~g-------------~~d~~~Le~~i~~~~~~~~ 246 (561)
..+++++... .+..-+..+.+.. +..++.. .. ..|+++|+++|.+ ....
T Consensus 178 ~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~ 255 (472)
T 1ohv_A 178 PDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVK--YRKK 255 (472)
T ss_dssp CCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHH--HHHT
T ss_pred CCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHh--cCCC
Confidence 1245554433 2222233333221 1112221 01 2378899999876 3222
Q ss_pred CCceEEEEEecCCCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCcc-ccceeeecCCcc-cc
Q psy9807 247 CSDLLQVVATLGTTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVE-LADSFNFNPHKW-ML 320 (561)
Q Consensus 247 g~~p~~vv~t~gtt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aDsi~~~~HK~-l~ 320 (561)
+..+.+|++....+++|.+.| +++|.++|++||+++|+|++|.|.......+.....++. ..|.++++ |+ ++
T Consensus 256 ~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~l~ 333 (472)
T 1ohv_A 256 KKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMMT 333 (472)
T ss_dssp TCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEEC--GGGSS
T ss_pred CCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEc--ccccc
Confidence 225677888777888999888 999999999999999999999863221110111011221 25877655 98 44
Q ss_pred ccccceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHH---HHHHHhhHHHHHHHHHHHHHHH
Q psy9807 321 VTFDCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLW---FVLRLLGVKYLQEYIRKQISLA 397 (561)
Q Consensus 321 ~P~g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw---~~l~~~g~~g~~~~~~~~~~la 397 (561)
.|++ + +.. +. .....+. ..+-....+... ++++.+.. +++.++..++.
T Consensus 334 ----GG~~-~-~~~-~~---~~~~~~~----------------~~T~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~ 384 (472)
T 1ohv_A 334 ----GGFF-H-KEE-FR---PNAPYRI----------------FNTWLGDPSKNLLLAEVINIIKR---EDLLSNAAHAG 384 (472)
T ss_dssp ----EEEE-E-CGG-GS---CSSSSSS----------------CCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHH
T ss_pred ----CCcc-C-chh-hc---ccccccc----------------cCccCccHHHHHHHHHHHHHHHh---CCHHHHHHHHH
Confidence 2443 4 221 11 0000000 001111223333 34443333 34567777888
Q ss_pred HHHHHHHhcC----CC-eEEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhc
Q psy9807 398 KEFEQLVRSD----DR-FEVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVR 472 (561)
Q Consensus 398 ~~l~~~l~~~----~g-~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~ 472 (561)
++|.+.|+++ |+ +.-+. +...++.|
T Consensus 385 ~~l~~~L~~l~~~~~~~v~~~~-~~g~~~~~------------------------------------------------- 414 (472)
T 1ohv_A 385 KVLLTGLLDLQARYPQFISRVR-GRGTFCSF------------------------------------------------- 414 (472)
T ss_dssp HHHHHHHHHHHHHCTTTCEEEE-EETTEEEE-------------------------------------------------
T ss_pred HHHHHHHHHHHhhCCCcEEeec-CCceEEEE-------------------------------------------------
Confidence 8888888764 32 21111 11222222
Q ss_pred cCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q psy9807 473 SDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEE 552 (561)
Q Consensus 473 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 552 (561)
.+. .+.....+.++|.+.|... .+. +..+||+++. ..++++||+++++.|.++.++
T Consensus 415 ------------------~~~-~~~~~~~~~~~l~~~Gv~~-~~~---g~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 415 ------------------DTP-DESIRNKLISIARNKGVML-GGC---GDKSIRFRPT-LVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp ------------------ECS-SHHHHHHHHHHHHHTTEEC-EEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHT
T ss_pred ------------------EeC-ChhHHHHHHHHHHHCCeEE-ecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHh
Confidence 111 1223457888888887544 332 3458999855 567899999999999887654
No 213
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.57 E-value=3e-12 Score=136.03 Aligned_cols=309 Identities=11% Similarity=-0.019 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
.+...++.++++++++.+.. ...+||+|||+||..|+.++|... + .+++++....
T Consensus 106 ~~~~~~la~~l~~~~~~~~~--------~~v~~~~sGseA~~~alk~a~~~~-------g--------~~~ii~~~~~yh 162 (453)
T 4ffc_A 106 YEQYVQVAELLNALTPGDHD--------KRTALFNSGAEAVENAIKVARLAT-------G--------RPAVVAFDNAYH 162 (453)
T ss_dssp CHHHHHHHHHHHHHSSCSSC--------EEEEEESSHHHHHHHHHHHHHHHH-------C--------CCEEEEETTCCC
T ss_pred CHHHHHHHHHHHHhCCCCCC--------cEEEEeCcHHHHHHHHHHHHHHhc-------C--------CCEEEEEcCccC
Confidence 45666788889998874321 157999999999999998887541 0 1234444333
Q ss_pred chHHHHHHhcc-------------CCeEEeeCC----C-CccC--------hhhHHHHHhhhchhhcCCceEEEEEecCC
Q psy9807 206 TELEVVMLDWL-------------GKMLDLPKE----F-LACS--------GGKGGGVIQRKSDREMCSDLLQVVATLGT 259 (561)
Q Consensus 206 ~s~~kaa~~~g-------------~~v~~v~~~----~-g~~d--------~~~Le~~i~~~~~~~~g~~p~~vv~t~gt 259 (561)
....-+..+.+ ..+..+|.. + ..++ .+.|++.+.. ..+.+|++.-..
T Consensus 163 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~-------~~~aavi~ep~~ 235 (453)
T 4ffc_A 163 GRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGA-------QSLAAIIIEPIQ 235 (453)
T ss_dssp CSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCG-------GGEEEEEECSSB
T ss_pred CcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCC-------CCEEEEEEcCCC
Confidence 11122222222 145566652 1 1122 2333333322 246677777777
Q ss_pred CCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhh
Q psy9807 260 TNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSW 335 (561)
Q Consensus 260 t~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~ 335 (561)
...|.+-| +++|.++|++||+++++|.+|.+.......+.....++ ..|.+++ .|+++.....|.++.++ +.
T Consensus 236 ~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~--sK~~~~G~~~G~~~~~~-~i 311 (453)
T 4ffc_A 236 GEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTM--AKGIAGGMPLSAVTGRA-EL 311 (453)
T ss_dssp TTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGGGTTSSCEEEEEEH-HH
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhh--hhhhcCCcCeEEEEECH-HH
Confidence 77788876 99999999999999999999986432221111111122 2466665 59998766678877643 22
Q ss_pred HHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc----CCCeE
Q psy9807 336 VVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS----DDRFE 411 (561)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~g~~ 411 (561)
.. .+.. .. . + .+-....+...+++..+....-++++++..++.+++++.|++ .|.+.
T Consensus 312 ~~-~~~~---~~-~---~-----------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 372 (453)
T 4ffc_A 312 MD-AVYA---GG-L---G-----------GTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIG 372 (453)
T ss_dssp HT-TSCT---TS-S---C-----------CSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred Hh-hhcc---cC-c---C-----------CCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 21 1210 00 0 0 011123344444444333211134455555666666666654 44443
Q ss_pred EeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeee
Q psy9807 412 VIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFR 491 (561)
Q Consensus 412 l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~ 491 (561)
.+. .....+.|.+... ..
T Consensus 373 ~~~-~~g~~~~~~~~~~---~~---------------------------------------------------------- 390 (453)
T 4ffc_A 373 EVR-GRGAMLAIEIVKP---GT---------------------------------------------------------- 390 (453)
T ss_dssp EEE-EETTEEEEEEBCT---TS----------------------------------------------------------
T ss_pred EEE-eeceEEEEEEecC---cc----------------------------------------------------------
Confidence 322 1222333322110 00
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9807 492 LKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELL 554 (561)
Q Consensus 492 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~ 554 (561)
..+.......+.+.+.++|.++. +... ...++|+++. ...++++++++++.|+++.+++.
T Consensus 391 ~~~~~~~~~~~~~~l~~~Gv~v~-~~~~-~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 391 LEPDAALTKSIAAEALSQGVLIL-TCGT-FGNVIRLLPP-LVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp CCBCHHHHHHHHHHHHHTTEECC-EECT-TSCEEEECCC-TTCCHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHHhCCCEEe-cCCC-CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 00122345678888888885543 3221 1248999755 45588999999999999887654
No 214
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.57 E-value=3.3e-12 Score=135.63 Aligned_cols=310 Identities=14% Similarity=0.040 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc--
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-- 205 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-- 205 (561)
.+...++.++++++++.+.. ...+||+|||+||..|+.++|... + ..++++....
T Consensus 103 ~~~~~~la~~l~~~~~~~~~--------~~v~~~~sGseA~~~Alk~a~~~~-------g--------~~~ii~~~~~yh 159 (451)
T 3oks_A 103 YEGYVAVCEQLNRLTPVRGD--------KRSALFNSGSEAVENAVKIARSHT-------H--------KPAVVAFDHAYH 159 (451)
T ss_dssp CHHHHHHHHHHHHHSSCCSS--------EEEEEESSHHHHHHHHHHHHHHHH-------C--------CCEEEEETTCCC
T ss_pred CHHHHHHHHHHHHhCCcCCC--------CEEEEeCcHHHHHHHHHHHHHHhc-------C--------CCeEEEEcCCcC
Confidence 45666778889998864311 157999999999999998887541 0 1234443333
Q ss_pred chHHHHHHhcc-------------CCeEEeeCC-CCc-------------cChhhHHHHHhhhchhhcCCceEEEEEecC
Q psy9807 206 TELEVVMLDWL-------------GKMLDLPKE-FLA-------------CSGGKGGGVIQRKSDREMCSDLLQVVATLG 258 (561)
Q Consensus 206 ~s~~kaa~~~g-------------~~v~~v~~~-~g~-------------~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g 258 (561)
....-+..+.+ ..+..+|.. ..+ .+++.+++.|++ .. .+..+.+|++.-.
T Consensus 160 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~--~~-~~~~~aavi~ep~ 236 (451)
T 3oks_A 160 GRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDK--QI-GADNLAAVVIEPI 236 (451)
T ss_dssp CSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHH--HT-CGGGEEEEEECSS
T ss_pred CccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHh--hc-CCCCEEEEEEcCC
Confidence 11111222222 145666652 111 134455555543 21 1235677777777
Q ss_pred CCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChh
Q psy9807 259 TTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPS 334 (561)
Q Consensus 259 tt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~ 334 (561)
..+.|.+-| +++|.++|++||+++++|.+|.+.......+.....++ ..|.+++ .|.++.....|.++.++ +
T Consensus 237 ~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t~--sK~l~~G~~iG~v~~~~-~ 312 (451)
T 3oks_A 237 QGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-DPDLIVT--AKGIAGGLPLSAVTGRA-E 312 (451)
T ss_dssp BTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCEEEEEEH-H
T ss_pred cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-CCCeeee--hhhhhCCcceEEEEECH-H
Confidence 777788877 99999999999999999999986432221111111122 3476654 59998766678777643 2
Q ss_pred hHHHhhccCCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc----CCCe
Q psy9807 335 WVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS----DDRF 410 (561)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~g~ 410 (561)
.. ..+.. .. . ..+-....+...+++..+....-++++++..++.+++++.|++ .|.+
T Consensus 313 ~~-~~~~~---~~-~--------------~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 373 (451)
T 3oks_A 313 IM-DSPHV---SG-L--------------GGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRI 373 (451)
T ss_dssp HH-TCSCT---TS-B--------------CCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred HH-hhhcC---CC-c--------------CCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 22 11210 00 0 0011123344444444443211124556666666666666654 4443
Q ss_pred EEeccccccceeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 411 EVIYEVLMGLVCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 411 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
..+. .....+.|.+.+.. .
T Consensus 374 ~~~~-~~G~~~~~~~~~~~---~--------------------------------------------------------- 392 (451)
T 3oks_A 374 GDVR-GRGAMIAMELVKAG---T--------------------------------------------------------- 392 (451)
T ss_dssp EEEE-EETTEEEEEEBSTT---S---------------------------------------------------------
T ss_pred EEEE-EeeEEEEEEEecCc---c---------------------------------------------------------
Confidence 3222 12223333221100 0
Q ss_pred ecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q psy9807 491 RLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTE 551 (561)
Q Consensus 491 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 551 (561)
..+.......+.+.+.++|.++... ... ..++|+++. ...++++++++++.|+++.+
T Consensus 393 -~~~~~~~~~~~~~~l~~~Gv~v~~~-~~~-~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 393 -TEPDADLTKALCAGAHAAGVIVLSC-GTY-GNVVRFLPP-LSIGDDLLNEGLDVLEEVLR 449 (451)
T ss_dssp -CCBCHHHHHHHHHHHHHTTEECEEE-CTT-SCEEEECCC-TTCCHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHhCCcEEecC-CCC-CCEEEEECC-CCCCHHHHHHHHHHHHHHHh
Confidence 0012234567888888988554432 211 247999754 45688999999999988764
No 215
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.56 E-value=1.9e-13 Score=143.50 Aligned_cols=224 Identities=12% Similarity=0.022 Sum_probs=143.9
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEE---eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI---QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP 203 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~---t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~ 203 (561)
..++|+ .+++++|.+. .++ ++|||+||..++.+..+ + ++.+++..
T Consensus 76 ~~~Le~----~lA~l~g~e~-----------alv~p~~~sGt~A~~~al~all~----------p-------GD~Vl~~~ 123 (427)
T 3hvy_A 76 RDSLDR----VYANIFNTES-----------AFVRPHFVNGTHAIGAALFGNLR----------P-------NDTMMSIC 123 (427)
T ss_dssp HHHHHH----HHHHHHTCSE-----------EEEETTCCSHHHHHHHHHHHTCC----------T-------TCEEEECS
T ss_pred HHHHHH----HHHHHhCCCc-----------eEEeCCCCcHHHHHHHHHHHhcC----------C-------CCEEEEeC
Confidence 455554 5688888764 366 89999999877665311 0 22444443
Q ss_pred -ccc----hHH--------HHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEec----CCCCCcccc
Q psy9807 204 -ACT----ELE--------VVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATL----GTTNCCAFD 266 (561)
Q Consensus 204 -s~~----s~~--------kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~----gtt~tG~id 266 (561)
+.+ ++. ..+...|.+++.+|.+++.+|+++|++++++ . .++.+|+++. .++.+|.+.
T Consensus 124 ~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~--~----~~tklV~i~~s~gyp~nptg~v~ 197 (427)
T 3hvy_A 124 GMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKK--D----DSIKLIHIQRSTGYGWRKSLRIA 197 (427)
T ss_dssp SSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHH--C----TTEEEEEEESSCCSSSSCCCCHH
T ss_pred CCCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhC--C----CCCEEEEEECCCCCCCCccccHH
Confidence 222 222 2334567888888887788999999999973 1 1577888877 788899999
Q ss_pred CHHHHHHHHhh--cCceEEechhcccccccCccccccccCccccceeeecCCccccccc--cceeEEecChhhHHHhhcc
Q psy9807 267 CLEEIGQVCRQ--KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF--DCSAMWLKDPSWVVNAFNV 342 (561)
Q Consensus 267 pl~eI~~ia~~--~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~--g~g~l~~r~~~~l~~~~~~ 342 (561)
|+++|+++|++ ||++++||.||+.+...... ... .+|+++.++||+++++. ..|+++. +++.+......
T Consensus 198 dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~~~---gaDiv~~S~sK~lgg~g~~~GG~i~~-~~~li~~l~~~ 270 (427)
T 3hvy_A 198 EIAEIIKSIREVNENVIVFVDNCYGEFVEEKEP---TDV---GADIIAGSLIKNIGGGIATTGGYIAG-KEEYVTQATFR 270 (427)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---GGG---TCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEECCccccccCCCC---ccc---CCeEEEECCcccccccccceEEEEEE-CHHHHHHHHHH
Confidence 99999999999 89999999999855421111 111 36999999999998732 1255555 45444332211
Q ss_pred -CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 343 -DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 343 -~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
....+.. ..+-.+.. .|..++ |......++++..+++.++++.|+++ ++++..
T Consensus 271 ~~~~~~g~--------------~~~~~~~~--a~~~~~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p 324 (427)
T 3hvy_A 271 VTVPGIGG--------------ECGSTFGV--MRSLYE--GLFMAPHVTIEAVKGAVFCARIMELA-GFDVLP 324 (427)
T ss_dssp HSCTTTGG--------------GCCCCTTC--HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEES
T ss_pred hhcCCccc--------------ccCCCHHH--HHHHHH--hHhHHHHHHHHHHHHHHHHHHHHHhC-CCeecC
Confidence 1111100 00111111 233333 33445678889999999999999998 667743
No 216
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.56 E-value=1.1e-12 Score=139.30 Aligned_cols=233 Identities=8% Similarity=-0.078 Sum_probs=138.0
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhc---cccccccccChhhHHHHHHHHHHHHHhcC
Q psy9807 67 DTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSI---ACIGFTWIASPACTELEVVMLDWLGKMLD 143 (561)
Q Consensus 67 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~---n~~~~~~~~sp~~~~lE~~~~~~la~l~g 143 (561)
..+-.+.+.+...-.+...+..-..|+++-..++..+++... +.... +.....|...+...++.+.+.+|+ +|
T Consensus 34 ~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a-~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g 109 (448)
T 3meb_A 34 DAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEA-EAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FG 109 (448)
T ss_dssp CTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHH-HHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HC
T ss_pred ChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHH-HHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cC
Confidence 345666666665444433444445565655545555554433 22222 122223433344556666666665 36
Q ss_pred CCccccccCCCCCCeEE--eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHH----hcc
Q psy9807 144 LPKEFLACSGGKGGGVI--QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVML----DWL 216 (561)
Q Consensus 144 ~~~~~~~~~~~~~~g~~--t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~----~~g 216 (561)
.+.... .....++ |+|||+|+..++...... . + ++.+++.... .+....+. ..|
T Consensus 110 ~~~~~~----~~~~i~~~~t~ggt~al~l~~~~~~~~--~------~-------gd~Vlv~~p~~~~~~~~~~~~~~~~G 170 (448)
T 3meb_A 110 KDSKAA----QEGRIASCQSLSGTGSLHIGFEFLHLW--M------P-------KAEFYMPSTTWPNHYGIYDKVFNKLK 170 (448)
T ss_dssp TTCHHH----HTTCEEEEEESHHHHHHHHHHHHHHHH--C------T-------TCCEEEESSCCTHHHHHHHHHHCTTT
T ss_pred CCcccc----CcCcEEEEECCcHHHHHHHHHHHHHHh--C------C-------CCEEEECCCCCHhHHHHHHhhHHhCC
Confidence 541000 0025788 999999986643322111 0 0 2345555555 56666677 788
Q ss_pred CCeEEeeC-C---CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEechhcc
Q psy9807 217 GKMLDLPK-E---FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 217 ~~v~~v~~-~---~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA~g 289 (561)
.+++.+|. + ++.+|+++|+++|++ . ...+.+++.+...+.||.+-+ +++|+++|++||+++++|.+|+
T Consensus 171 ~~v~~~~~~~~~~~~~~d~e~l~~~l~~--~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~ 245 (448)
T 3meb_A 171 VPYKEYTYLRKDGELEIDFSNTKKDIQS--A---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQ 245 (448)
T ss_dssp SCCEEECCBCTTSCSSBCHHHHHHHHHH--S---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT
T ss_pred CeEEEEeccccccCCCcCHHHHHHHHHh--C---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 99999998 3 478999999999975 2 114567777778888998865 5569999999999999999988
Q ss_pred cccccCc-----cccccccCccccceeeecCCcccccc-ccceeE
Q psy9807 290 GSAFICP-----ENRYLMKGVELADSFNFNPHKWMLVT-FDCSAM 328 (561)
Q Consensus 290 g~~~~~~-----~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l 328 (561)
+...... ..+... ....-..++.++||.++.| ..+|.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~RiG~l 289 (448)
T 3meb_A 246 GFATGSFEADAFAVRMFV-DAGVEVLVAQSFSKNFGLYGERIGCL 289 (448)
T ss_dssp TTSSSCHHHHTHHHHHHH-HTTCCEEEEEECTTTSCCGGGCCEEE
T ss_pred cccCCCcccCchhHHHHh-hcCCcEEEEecccccCCCccccceee
Confidence 6433211 011110 1111135688999988754 236766
No 217
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.56 E-value=1.1e-13 Score=145.85 Aligned_cols=166 Identities=17% Similarity=0.100 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
.....++.+++++.++ +.+ ..+|++|||+||..|+..++... + .+++++.... +
T Consensus 91 ~~~~~~la~~l~~~~~-~~~---------~v~~~~ggsea~~~al~~a~~~~-------~--------~~~vi~~~~~yh 145 (427)
T 3fq8_A 91 CALENVLAEMVNDAVP-SIE---------MVRFVNSGTEACMAVLRIMRAYT-------G--------RDKIIKFEGCYH 145 (427)
T ss_dssp CHHHHHHHHHHHHHST-TCS---------EEEEESSHHHHHHHHHHHHHHHH-------C--------CCEEEEEETCCC
T ss_pred CHHHHHHHHHHHHhCC-CCC---------EEEEeCCHHHHHHHHHHHHHHhh-------C--------CCEEEEECCCcC
Confidence 4567778889999887 322 57999999999999998876531 0 1234443222 1
Q ss_pred h-HHHHHHhcc-------------------CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc
Q psy9807 207 E-LEVVMLDWL-------------------GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD 266 (561)
Q Consensus 207 s-~~kaa~~~g-------------------~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id 266 (561)
. ...+....+ ..+..+| ..|+++|++++++ . +..+.+|+++...+.+|.+.
T Consensus 146 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~le~~l~~--~---~~~~~~vi~~p~~~~~G~~~ 216 (427)
T 3fq8_A 146 GHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTP----YNDLEAVKALFAE--N---PGEIAGVILEPIVGNSGFIV 216 (427)
T ss_dssp CSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEE----TTCHHHHHHHHHH--S---TTTEEEEEECSSBCTTSCBC
T ss_pred CCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecC----CCCHHHHHHHHHh--C---CCCEEEEEEcCCcCCCCCcC
Confidence 1 111111111 1233333 2289999999976 2 22577888888888899999
Q ss_pred C----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEec
Q psy9807 267 C----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLK 331 (561)
Q Consensus 267 p----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r 331 (561)
| +++|.++|++||+++++|.+|++. ...........++ ..|.++++ |++++-...|+++.+
T Consensus 217 ~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~~G~~~~~ 281 (427)
T 3fq8_A 217 PDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGLPVGAYGGK 281 (427)
T ss_dssp CCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-CCSEEEEC--GGGGTTSSCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-CCChhhhh--hhhhCCcceEEEEEc
Confidence 9 999999999999999999999864 2221111111122 24666554 999854457877663
No 218
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.56 E-value=1.2e-13 Score=145.61 Aligned_cols=223 Identities=12% Similarity=-0.048 Sum_probs=145.3
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEec-cc-chH
Q psy9807 131 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASP-AC-TEL 208 (561)
Q Consensus 131 E~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~-s~-~s~ 208 (561)
.+++.+++++++|.+... .-++++|||+||..++.+.... ++.+++.. .. .+.
T Consensus 67 ~~~l~~~la~~~g~~~~~--------~~i~~~sGt~Ai~~al~al~~~-----------------Gd~Vl~~~~~~y~~~ 121 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGL--------VRPQIISGTHAISTALFGILRP-----------------GDELLYITGKPYDTL 121 (431)
T ss_dssp HHHHHHHHHHHTTCSEEC--------CBTTSCSHHHHHHHHHHTTCCT-----------------TCEEEECSSSCCTTH
T ss_pred HHHHHHHHHHHhCCCccc--------ccceeeCHHHHHHHHHHHhCCC-----------------CCEEEEeCCCCchhH
Confidence 455667889999987541 1122558899998877543110 22444444 23 555
Q ss_pred HHHHH----------hccCCeEEeeC-CCCccChhhHHHHHhhhchhhcCCceEEEEEec----CCCCCccccCHHHHHH
Q psy9807 209 EVVML----------DWLGKMLDLPK-EFLACSGGKGGGVIQRKSDREMCSDLLQVVATL----GTTNCCAFDCLEEIGQ 273 (561)
Q Consensus 209 ~kaa~----------~~g~~v~~v~~-~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~----gtt~tG~idpl~eI~~ 273 (561)
...+. ..|.+++.+|. .++.+|+++|+++|++ ++.+|+++. .++.+|.+.|+++|++
T Consensus 122 ~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~--------~tk~V~i~~sp~np~~~~~~~~~l~~i~~ 193 (431)
T 3ht4_A 122 EEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHS--------NTKMIGIQRSKGYATRPSFTISQIKEMIA 193 (431)
T ss_dssp HHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCT--------TEEEEEEECSCTTSSSCCCCHHHHHHHHH
T ss_pred HHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCC--------CCeEEEEECCCCCCCCCcCCHHHHHHHHH
Confidence 54443 35788999998 7899999999999976 577888876 7788899999999999
Q ss_pred HHhh--cCceEEechhcccccccCccccccccCccccceeeecCCccccc---cccceeEEecChhhHHHhhcc-CCCcc
Q psy9807 274 VCRQ--KDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLV---TFDCSAMWLKDPSWVVNAFNV-DPLYL 347 (561)
Q Consensus 274 ia~~--~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~---P~g~g~l~~r~~~~l~~~~~~-~~~yl 347 (561)
+|++ ||++++||++|+.+..... .... .+|.++.++||++++ |.| |+++. +++.+...... ....+
T Consensus 194 la~~~~~~~~livDea~~~~~~~~~---~~~~---g~Di~~~S~sK~lgg~~~~~G-G~v~~-~~~li~~l~~~~~~~~~ 265 (431)
T 3ht4_A 194 FVKEIKPDVVVFVDNCYGEFIEEQE---PCHV---GADLMAGSLIKNPGGGIVKTG-GYIVG-KEQYVEACAYRLTSPGI 265 (431)
T ss_dssp HHHHHCTTCEEEEECTTCTTSSSCC---GGGT---TCSEEEEETTSGGGTTTCSSC-EEEEE-CHHHHHHHHHHHSCTTT
T ss_pred HHHhhCCCCEEEEeCCChhhccCCC---cccc---CCeEEEcCccccCCCCCCCce-EEEEe-cHHHHHHHHHHhccCCc
Confidence 9999 9999999999986543221 1111 359999999999876 555 66666 44433322110 11110
Q ss_pred ccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy9807 348 KHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVI 413 (561)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~ 413 (561)
.. ..+-.+.. .|..+ .+...+..++++..++++++++.|++. ++++.
T Consensus 266 g~--------------~~~~~~~~--~~~~~--~~l~~~~~~~~~~~~~a~~l~~~L~~~-g~~v~ 312 (431)
T 3ht4_A 266 GA--------------EAGASLYS--LQEMY--QGFFLAPHVAGQALKGAIFTAAFLEKL-GMNTS 312 (431)
T ss_dssp TT--------------SCSCCCSC--SHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCEE
T ss_pred cc--------------ccCccHHH--HHHHH--hHhhhHHHHHHHHHHHHHHHHHHHHhC-cCEec
Confidence 00 00001110 12222 233445678888999999999999987 66664
No 219
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.55 E-value=4.7e-13 Score=145.22 Aligned_cols=202 Identities=8% Similarity=-0.016 Sum_probs=131.0
Q ss_pred hHHHHHHHHHhhccccccccc-cChhhHHHHHHHHHHHHHhc-C-CCccccccCCCCCCeEEeCChhHHHHHHHHHHHHH
Q psy9807 102 YPAIVADILSDSIACIGFTWI-ASPACTELEVVMLDWLGKML-D-LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAK 178 (561)
Q Consensus 102 ~~~~~~~~l~~~~n~~~~~~~-~sp~~~~lE~~~~~~la~l~-g-~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~ 178 (561)
++.++.++....... .|. ......++++.+.+++.+.+ + .+... ....++|+|||+|+..++.+....
T Consensus 117 ~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~------~~~i~~t~G~t~al~~~~~~l~~~ 187 (533)
T 3f6t_A 117 RDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAE------QTDLFPTEGGTAAIVYAFHSLAEN 187 (533)
T ss_dssp HHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGG------GEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCC------cceEEEECCHHHHHHHHHHHhhhh
Confidence 566666665555432 222 33445789999999997763 3 22110 025789999999987776642211
Q ss_pred HHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-----CCCccChhhHHHHHhhhchhhcCCceEE
Q psy9807 179 TMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK-----EFLACSGGKGGGVIQRKSDREMCSDLLQ 252 (561)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~-----~~g~~d~~~Le~~i~~~~~~~~g~~p~~ 252 (561)
.+- ++ ++.+++.... .+...++...|.+++.+|. +++.+|+++|++++.+ .+.+
T Consensus 188 ~l~-----~~-------gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~--------~~k~ 247 (533)
T 3f6t_A 188 HLL-----KK-------GDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP--------SIKA 247 (533)
T ss_dssp TSS-----CT-------TCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT--------TEEE
T ss_pred hcc-----CC-------cCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC--------CCeE
Confidence 000 00 2344444444 5566666778888888887 2478999999998866 5677
Q ss_pred EEEecCCCCCccccCHH---HHHHHHh-hcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-ccee
Q psy9807 253 VVATLGTTNCCAFDCLE---EIGQVCR-QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSA 327 (561)
Q Consensus 253 vv~t~gtt~tG~idpl~---eI~~ia~-~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~ 327 (561)
|+++..++.+|.+-|.+ +|+++|+ +||+++++|.+|+....-....... ....+.++.+++|.++.|. -+|+
T Consensus 248 v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~---~~~~~i~~~S~SK~~g~~G~RiG~ 324 (533)
T 3f6t_A 248 LIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV---VPYNTMLVYSYSKLFGCTGWRLGV 324 (533)
T ss_dssp EEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH---SGGGEEEEEESHHHHTCGGGCEEE
T ss_pred EEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc---CCCCEEEEecCcccCCCcccceEE
Confidence 88778888899997766 7888888 6899999999998543211111111 1223688999999887442 2788
Q ss_pred EEecChhh
Q psy9807 328 MWLKDPSW 335 (561)
Q Consensus 328 l~~r~~~~ 335 (561)
++.++...
T Consensus 325 l~~~~~~~ 332 (533)
T 3f6t_A 325 IALNEKNV 332 (533)
T ss_dssp EEEESSCH
T ss_pred EEECcHHH
Confidence 88876533
No 220
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.54 E-value=2.3e-13 Score=143.59 Aligned_cols=222 Identities=14% Similarity=-0.005 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c-h
Q psy9807 130 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T-E 207 (561)
Q Consensus 130 lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~-s 207 (561)
...++.+.+++.++ .. ...+|++|||+||..|+.+++... + .+++++.... + +
T Consensus 94 ~~~~l~~~la~~~~-~~---------~~v~~~~~Gsea~~~ai~~a~~~~------~---------~~~vi~~~~~yhg~ 148 (429)
T 3k28_A 94 IENKLAKLVIERVP-SI---------EIVRMVNSGTEATMSALRLARGYT------G---------RNKILKFIGCYHGH 148 (429)
T ss_dssp HHHHHHHHHHHHST-TC---------SEEEEESSHHHHHHHHHHHHHHHH------T---------CCEEEEEETCCCCS
T ss_pred HHHHHHHHHHHhCC-CC---------CEEEEeCChHHHHHHHHHHHHHhh------C---------CCEEEEECCCcCCC
Confidence 34445566677765 22 257999999999999999887541 0 1233433222 1 1
Q ss_pred HHHHHHhccC-------------------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC-
Q psy9807 208 LEVVMLDWLG-------------------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC- 267 (561)
Q Consensus 208 ~~kaa~~~g~-------------------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp- 267 (561)
...+....+. .+..+| ..|+++|+++|++ .. ..+.+|++....+.+|.+.|
T Consensus 149 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~le~~l~~--~~---~~~~~vi~ep~~~~~G~~~~~ 219 (429)
T 3k28_A 149 GDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVA----YNDLESVKYAFEQ--FG---DDIACVIVEPVAGNMGVVPPQ 219 (429)
T ss_dssp CGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEE----TTCHHHHHHHHHH--HG---GGEEEEEECSSBCTTSCBCCC
T ss_pred cHHHHHhcCCcccccCCCCcCCCCCcccCceeecC----CCCHHHHHHHHHh--CC---CCEEEEEEcCCCCCCCcccCC
Confidence 1111111222 222333 2289999999975 21 25677888877778899988
Q ss_pred ---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhccCC
Q psy9807 268 ---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNVDP 344 (561)
Q Consensus 268 ---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~~~ 344 (561)
+++|.++|++||+++++|.+|.+. ...........++ ..|.++ +.|.++.....|.++.++ +.+ ..+....
T Consensus 220 ~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t--~sK~~~~G~~iG~~~~~~-~~~-~~~~~~~ 293 (429)
T 3k28_A 220 PGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGV-TPDLTC--LGKVIGGGLPVGAYGGKA-EIM-RQVAPSG 293 (429)
T ss_dssp TTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEE--ECGGGGTTSCCEEEEECH-HHH-TTBTTTS
T ss_pred HHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCC-CCceeh--hhhhhcCCCCeEEEEEcH-HHH-hhhccCC
Confidence 999999999999999999999764 2211110001122 246665 569998777788887743 332 2221111
Q ss_pred CccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 345 LYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
.... ..+-....+...+++..+.... ++++++..++.+++++.|++.
T Consensus 294 ~~~~---------------~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~ 340 (429)
T 3k28_A 294 PIYQ---------------AGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKA 340 (429)
T ss_dssp SBCC---------------CCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHH
T ss_pred Cccc---------------cCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 1000 0111123344444444432111 566777777777887777653
No 221
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.54 E-value=1e-12 Score=139.59 Aligned_cols=168 Identities=15% Similarity=0.013 Sum_probs=107.1
Q ss_pred hHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 127 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
..+++.++.+|+++.++ ..+ ..+|++|||+||..++.+||... + .+++++....
T Consensus 95 ~~~~~~~la~~l~~~~~-~~~---------~v~~~~gg~eA~~~al~~ar~~~-------~--------~~~vi~~~~~y 149 (453)
T 2cy8_A 95 SHPLEVRWAERIVAAFP-SIR---------KLRFTGSGTETTLLALRVARAFT-------G--------RRMILRFEGHY 149 (453)
T ss_dssp SCHHHHHHHHHHHHHCT-TCS---------EEEEESCHHHHHHHHHHHHHHHH-------C--------CCEEEEECC--
T ss_pred CCHHHHHHHHHHHhhCC-CCC---------EEEEeCCHHHHHHHHHHHHHHhh-------C--------CCEEEEEcCCc
Confidence 46789999999999985 222 57899999999999999876431 0 1234444433
Q ss_pred chHHHHH-H----------hccC------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC-
Q psy9807 206 TELEVVM-L----------DWLG------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC- 267 (561)
Q Consensus 206 ~s~~kaa-~----------~~g~------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp- 267 (561)
.....++ . ..|. .+..+| ..|+++|+++|++ .. ..+.+|+++...+.+|.+.|
T Consensus 150 hg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~d~~~le~~l~~--~~---~~~~~vi~ep~~~~tG~~~~~ 220 (453)
T 2cy8_A 150 HGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIR----PDDIEGMREVFAN--HG---SDIAAFIAEPVGSHFGVTPVS 220 (453)
T ss_dssp --------------------------CGGGEEEEC----TTCHHHHHHHHHH--HG---GGEEEEEECSSEHHHHTEECC
T ss_pred CCCchhhHhhcCCccCCCcCCCCCccccCceeecC----CCCHHHHHHHHHh--cC---CCEEEEEECCCCCCCCCcCCC
Confidence 1111111 1 1122 233343 2589999999975 21 24667777666666898877
Q ss_pred ---HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 268 ---LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 268 ---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
+++|.++|++||+++++|.+|++. ...+.......++ ..|.+ +++|+++.....|+++.++
T Consensus 221 ~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~--s~sK~l~~G~~~G~v~~~~ 284 (453)
T 2cy8_A 221 DSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDV-QPDLT--CLAKASAGGLPGGILGGRE 284 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-CCSEE--EEEGGGGTTSSCEEEEECH
T ss_pred HHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-CCcEE--EEChhhhCCcceEEEechH
Confidence 999999999999999999999864 3221111001122 24765 5569999766788888754
No 222
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.53 E-value=1.5e-12 Score=137.24 Aligned_cols=165 Identities=14% Similarity=0.073 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-ch
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TE 207 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s 207 (561)
+...++.+++++.++-+ ...+|++|||+||..|+.++|... + ..++++.... +.
T Consensus 93 ~~~~~la~~l~~~~~~~----------~~v~~~~sGsea~~~al~~a~~~~------~---------~~~ii~~~~~yhg 147 (429)
T 4e77_A 93 EMEVKMAQLVTDLVPTM----------DMVRMVNSGTEATMSAIRLARGYT------G---------RDKIIKFEGCYHG 147 (429)
T ss_dssp HHHHHHHHHHHHHSTTC----------SEEEEESSHHHHHHHHHHHHHHHH------C---------CCEEEEETTCCCC
T ss_pred HHHHHHHHHHHhhCCCC----------CEEEEeCcHHHHHHHHHHHHHHhh------C---------CCEEEEEcCccCC
Confidence 45566677888887622 257999999999999998876531 0 1234443333 11
Q ss_pred HHH-HHHhcc-------------------CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC
Q psy9807 208 LEV-VMLDWL-------------------GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC 267 (561)
Q Consensus 208 ~~k-aa~~~g-------------------~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp 267 (561)
... +....+ ..+..+| ..|+++|+++|++ . +..+.+|++......+|.+.|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~le~~l~~--~---~~~~~~vi~ep~~~~~g~~~~ 218 (429)
T 4e77_A 148 HADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCT----YNDLASVRQAFEQ--Y---PQEVACIIVEPVAGNMNCIPP 218 (429)
T ss_dssp ------------------CCCTTSCGGGGTTEEEEC----TTCHHHHHHHHHH--S---TTTEEEEEECSSBCTTSCBCC
T ss_pred CChhhhhhcCCcccccCCCCcCCCCCccCCceeecC----CCCHHHHHHHHHh--c---CCCEEEEEECCccCCCCCcCC
Confidence 111 110100 0122222 2389999999975 2 124667777777777888888
Q ss_pred ----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEec
Q psy9807 268 ----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLK 331 (561)
Q Consensus 268 ----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r 331 (561)
+++|.++|++||+++++|.+|++. ...........++ ..|.++ +.|.+++....|+++.+
T Consensus 219 ~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~pdi~t--~sK~~~~G~~~G~~~~~ 282 (429)
T 4e77_A 219 LPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-IPDLTC--LGKIIGGGMPVGAFGGR 282 (429)
T ss_dssp CTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-CCSEEE--EEGGGGTTSCCEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-CCCeee--ecccccCCCCeEEEEEC
Confidence 999999999999999999999865 2221111111122 246654 45999876677877664
No 223
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.50 E-value=2.3e-12 Score=136.05 Aligned_cols=167 Identities=16% Similarity=0.041 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
.++..++.++++++++ .. ...+|++|||+||..|+.+||... . .+++++.... +
T Consensus 95 ~~~~~~l~~~la~~~~-~~---------~~v~~~~sgseA~~~al~~ar~~~--~-------------~~~vi~~~~~yh 149 (434)
T 2epj_A 95 GEAEVLLAEKILGYVK-RG---------GMIRFVNSGTEATMTAIRLARGYT--G-------------RDLILKFDGCYH 149 (434)
T ss_dssp CHHHHHHHHHHHHHHC-TT---------CEEEEESSHHHHHHHHHHHHHHHH--C-------------CCEEEEEETCCC
T ss_pred CHHHHHHHHHHHHhCC-CC---------CEEEEeCCHHHHHHHHHHHHHHhh--C-------------CCeEEEEcCCcC
Confidence 3455667777788774 11 157999999999999999876431 0 1234444322 1
Q ss_pred hHHHHH--------------HhccC------CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc
Q psy9807 207 ELEVVM--------------LDWLG------KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD 266 (561)
Q Consensus 207 s~~kaa--------------~~~g~------~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id 266 (561)
....++ ...|. .+..+| ..|+++|+++|++ . +..+.+|+++...+.+|.+.
T Consensus 150 g~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~----~~d~~~le~~l~~--~---~~~~~~vi~ep~~~~~G~~~ 220 (434)
T 2epj_A 150 GSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTP----YNDVEALERVFAE--Y---GDRIAGVIVEPVIANAGVIP 220 (434)
T ss_dssp CSSGGGSEECC------CEESSTTCCHHHHTTEEEEE----TTCHHHHHHHHHH--H---GGGEEEEEECSSBCSSSCBC
T ss_pred CCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecC----CCCHHHHHHHHHh--C---CCCEEEEEEeCCcCCCCccC
Confidence 100000 01122 345555 3589999999975 2 12567777777777789988
Q ss_pred C----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 267 C----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 267 p----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
| +++|.++|++||+++++|.+|++. ...+.......++ ..|.+ +++|+++.....|+++.++
T Consensus 221 ~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~--s~sK~l~~G~~~G~v~~~~ 286 (434)
T 2epj_A 221 PRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI-EGDII--VLGKIIGGGFPVGAVAGSR 286 (434)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-CCSEE--EEEGGGGTTSSCEEEEECH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-CCCee--eecchhcCCcceeeeeecH
Confidence 8 999999999999999999999964 2222111001122 35765 4569998755678888754
No 224
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.50 E-value=1.9e-12 Score=135.39 Aligned_cols=290 Identities=8% Similarity=-0.065 Sum_probs=160.3
Q ss_pred HHHHHHHHHHhhcCCCCCCCCccccccCCCCCChHHHHHHHHHhhccccccccccChhhHHHHHHHHHHHHHhcCCCccc
Q psy9807 69 WQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEF 148 (561)
Q Consensus 69 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~~~~~la~l~g~~~~~ 148 (561)
.-.+.+.+...-.+...+.....|+++...+... +.+..+.......|...+...++.+.+.+|+. |.....
T Consensus 28 i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~-----~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~---~~~~~~ 99 (409)
T 4eu1_A 28 ILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVL-----ECVKQATLGTNMDYAPVTGIASFVEEAQKLCF---GPTCAA 99 (409)
T ss_dssp HHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCC-----HHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHH---CSSCHH
T ss_pred HHHHHHHHhhCCCcCceeeeeeEEECCCCCEeec-----HHHHhcCccccccCCCCCCcHHHHHHHHHHHc---CCCchh
Confidence 3455555554433333333333333333222222 22233333333445444555788888888873 332100
Q ss_pred cccCCCCCCe--EEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHHHhccCCeEEeeC-
Q psy9807 149 LACSGGKGGG--VIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVMLDWLGKMLDLPK- 224 (561)
Q Consensus 149 ~~~~~~~~~g--~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa~~~g~~v~~v~~- 224 (561)
. ..... ..|.+||+|+..+..+++.. . . .++.+++.... .+...+++..|.+++.+|.
T Consensus 100 ~----~~~~i~~~~~~~g~ga~~~~~~~~~~~-~------~-------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~ 161 (409)
T 4eu1_A 100 L----RDGRIASCQTLGGTGALRIGGDLLNRF-V------A-------NCNRIYGPDVGYPNHESIFAKAGMELTPYSYY 161 (409)
T ss_dssp H----HTTCEEEEEESHHHHHHHHHHHHGGGT-S------S-------SCCEEEEESSCCTHHHHHHHHTTCEEEEECCE
T ss_pred h----ccCceeeeecccchHHHHHHHHHHHHh-c------C-------CCCEEEEeCCCcHhHHHHHHHcCCeEEEEEee
Confidence 0 00123 34899999886554432211 0 0 02345555444 6677778888999999997
Q ss_pred --CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHHhhcCceEEechhcccccccCc--c
Q psy9807 225 --EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVCRQKDVWLHVDAAYAGSAFICP--E 297 (561)
Q Consensus 225 --~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia~~~~~~lhVDaA~gg~~~~~~--~ 297 (561)
+++.+|+++|++++++ .. ..+.+++.+...+.||.+-+ +++|+++|++||+++++|.+|+....... .
T Consensus 162 ~~~~~~~d~~~l~~~l~~--~~---~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~ 236 (409)
T 4eu1_A 162 DPATKGLNLAGMLECLDK--AP---EGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYD 236 (409)
T ss_dssp ETTTTEECHHHHHHHHHH--SC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHH
T ss_pred cCcCCcCcHHHHHHHHHh--CC---CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccc
Confidence 4579999999999975 21 13556666777888998876 55599999999999999999886433210 0
Q ss_pred cccc--ccCccccceeeecCCcccccc-ccceeE--EecChhhHH---HhhccCCCccccCCCCCCCCCCcccccCcCCc
Q psy9807 298 NRYL--MKGVELADSFNFNPHKWMLVT-FDCSAM--WLKDPSWVV---NAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRF 369 (561)
Q Consensus 298 ~~~~--~~gi~~aDsi~~~~HK~l~~P-~g~g~l--~~r~~~~l~---~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~ 369 (561)
.... +.+...-..+..+++|.++.| ..+|.+ ++.++.... ..+.....+. .-..
T Consensus 237 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~------------------~~~~ 298 (409)
T 4eu1_A 237 AFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPM------------------YNNP 298 (409)
T ss_dssp THHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHH------------------HSSC
T ss_pred hHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhh------------------cCCC
Confidence 1110 001111135667889999855 346766 566654211 1111000000 0001
Q ss_pred chHHHHHHHHHhh--------HHHHHHHHHHHHHHHHHHHHHHhcC
Q psy9807 370 RSLKLWFVLRLLG--------VKYLQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 370 ~al~lw~~l~~~g--------~~g~~~~~~~~~~la~~l~~~l~~~ 407 (561)
..+..+++...+. .+.++++.++..++.+++.+.|++.
T Consensus 299 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (409)
T 4eu1_A 299 PLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKAC 344 (409)
T ss_dssp CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1233333333332 3446777888888999999999886
No 225
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.49 E-value=8.9e-12 Score=128.10 Aligned_cols=251 Identities=12% Similarity=0.032 Sum_probs=153.2
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCe--EEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGG--VIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g--~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
|..+....++|.-+++...++||++.. .+| +=.-||+.||+.+..+..+. +++
T Consensus 92 YgGce~vD~iE~la~~rak~lF~a~~A--------~w~VNVQP~SGs~AN~avy~All~P-----------------GD~ 146 (490)
T 3ou5_A 92 YGGAEVVDEIELLCQRRALEAFDLDPA--------QWGVNVQPYSGSPANLAVYTALLQP-----------------HDR 146 (490)
T ss_dssp ----CHHHHHHHHHHHHHHHHTTCCTT--------TEEEECCCSSHHHHHHHHHHHHCC------------------CCC
T ss_pred cCCChHHHHHHHHHHHHHHHHhCCCcc--------ccCCCCCcCCHHHHHHHHHHHHcCC-----------------CCE
Confidence 445566789999999999999999753 133 55678999998877764321 122
Q ss_pred eEEeccc----chHH-----HHHHhccC--CeEEeeC--CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc
Q psy9807 199 LIASPAC----TELE-----VVMLDWLG--KMLDLPK--EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF 265 (561)
Q Consensus 199 ~vv~~s~----~s~~-----kaa~~~g~--~v~~v~~--~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i 265 (561)
+....-. .+.. +.....|. +....++ +++.+|.|.+++...+ . +|.+|++ |.+..--.
T Consensus 147 ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~--~-----kPklIi~--G~SaY~r~ 217 (490)
T 3ou5_A 147 IMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARL--F-----RPRLIIA--GTSAYARL 217 (490)
T ss_dssp EECBC----------------------------CBCEETTTTEECHHHHHHHHHH--H-----CCSEEEE--CCSSCCSC
T ss_pred EEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhh--c-----CCCeEEE--CCccCccc
Confidence 3222111 1111 11112222 3333444 6789999999999877 3 6888776 55555566
Q ss_pred cCHHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChh-----------
Q psy9807 266 DCLEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPS----------- 334 (561)
Q Consensus 266 dpl~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~----------- 334 (561)
-|++++.+||++.|++|++|.||-++.+..-.+..- ++.||+++.+.||.|.+|. .|++++++..
T Consensus 218 id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP---~~~ADvVTtTTHKTLrGPr-GG~Il~~~~~~~~~~k~~~~~ 293 (490)
T 3ou5_A 218 IDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSP---FKHADIVTTTTHKTLRGAR-SGLIFYRKGVKAVDPKTGREI 293 (490)
T ss_dssp CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG---GGTCSEEEEESSSTTCSCS-CEEEEEECSEEEECC--CCEE
T ss_pred cCHHHHHHHHhhcccEEEechhhhhhhhcccccCCc---cccceEEeccccccccCCC-ceEEEeccccccccccccchh
Confidence 789999999999999999999998776654444333 4457999999999999998 4666666521
Q ss_pred --hHHHhhccCCCccccCCCCCCCCCCcccccCcCCcch-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q psy9807 335 --WVVNAFNVDPLYLKHDQQGSAPDYRHWQIPLGRRFRS-LKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFE 411 (561)
Q Consensus 335 --~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~a-l~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~g~~ 411 (561)
.+.+.+.. -++ -+++++.-... .+...+++.--...+.+..++..++|+.|++.|.+. |++
T Consensus 294 ~~~~~kkin~---aVF------------Pg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~ 357 (490)
T 3ou5_A 294 PYTFEDRINF---AVF------------PSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYS 357 (490)
T ss_dssp ECCCHHHHHH---HHT------------TTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred HHHHHHHHHh---hcC------------ccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCe
Confidence 00000000 000 01122222222 222333444344557788889999999999999987 999
Q ss_pred Eecc-ccccceeeec
Q psy9807 412 VIYE-VLMGLVCFRL 425 (561)
Q Consensus 412 l~~~-~~~~~v~f~~ 425 (561)
++.. .+.-+|..++
T Consensus 358 vvsGgTdnHlvLvDl 372 (490)
T 3ou5_A 358 LVSGGTDNHLVLVDL 372 (490)
T ss_dssp EGGGSCSSSEEEEEC
T ss_pred eecCCCCceEEEEec
Confidence 9853 3344444443
No 226
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.42 E-value=1.4e-11 Score=129.68 Aligned_cols=224 Identities=13% Similarity=-0.009 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-c
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-T 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~ 206 (561)
.++..++.+++++.++ .. ...+|++|||+||..++.+||.... .+++++.... +
T Consensus 91 ~~~~~~l~~~l~~~~~-~~---------~~v~~~~~g~ea~~~al~~ar~~~~---------------~~~vi~~~~~yh 145 (424)
T 2e7u_A 91 SPLEVALAKKVKRAYP-FV---------DLVRFVNSGTEATMSALRLARGYTG---------------RPYIVKFRGNYH 145 (424)
T ss_dssp CHHHHHHHHHHHHHCT-TC---------CEEEEESSHHHHHHHHHHHHHHHHC---------------CCEEEEETTCCC
T ss_pred CHHHHHHHHHHHHhCC-CC---------CEEEEeCCHHHHHHHHHHHHHHhhC---------------CCEEEEECCCcC
Confidence 4566677778888875 22 2578999999999999988764310 1234444333 1
Q ss_pred hHHHHH-Hh-------------cc------CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc
Q psy9807 207 ELEVVM-LD-------------WL------GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD 266 (561)
Q Consensus 207 s~~kaa-~~-------------~g------~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id 266 (561)
....++ .. .| ..++.+| ..|+++|+++|++ . +..+.+|+++....++|.+-
T Consensus 146 g~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~----~~d~~~le~~l~~--~---~~~~~~vi~ep~~~~~G~~~ 216 (424)
T 2e7u_A 146 GHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLE----YNDPEGLREVLKR--R---GEEIAAIIFEPVVGNAGVLV 216 (424)
T ss_dssp CCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEEC----TTCHHHHHHHHHH--H---GGGEEEEEECSSBCTTSCBC
T ss_pred CCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCC----CCCHHHHHHHHHh--C---CCCEEEEEEeCCCCCCCCcC
Confidence 111111 00 11 1344444 3589999999975 2 11466777776666789888
Q ss_pred C----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecChhhHHHhhcc
Q psy9807 267 C----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDPSWVVNAFNV 342 (561)
Q Consensus 267 p----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~~~l~~~~~~ 342 (561)
| +++|.++ ++||+++++|.+|++. ...........++ ..|.+ +++|+++.....|+++.++ +.. ..+..
T Consensus 217 ~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~--s~sK~l~~G~~~G~~~~~~-~~~-~~~~~ 289 (424)
T 2e7u_A 217 PTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL-KPDLV--TLGKILGGGLPAAAYAGRR-EIM-EKVAP 289 (424)
T ss_dssp CCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEE--EECGGGGTTSSCEEEEECH-HHH-TTBTT
T ss_pred CCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-Ccchh--hhhhhhhCCcceEEEEEcH-HHH-hhhcc
Confidence 7 9999999 9999999999999964 3222111001122 24765 5679999756688888754 322 22221
Q ss_pred CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHhcC
Q psy9807 343 DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKY-LQEYIRKQISLAKEFEQLVRSD 407 (561)
Q Consensus 343 ~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~ 407 (561)
..... ...+-....+...+++..+.... .+++.++..++.+++.+.|++.
T Consensus 290 ~~~~~---------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 340 (424)
T 2e7u_A 290 LGPVY---------------QAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEV 340 (424)
T ss_dssp TSSBC---------------CCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcc---------------cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 00000 00011122333333333332111 2556777888888888888764
No 227
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.38 E-value=2.9e-11 Score=127.47 Aligned_cols=165 Identities=15% Similarity=0.068 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
.+|.++.+.+++++.--+ ...|++|||+||..|+..||.... ..+++.+...
T Consensus 127 ~~~~~lae~l~~~~p~~~----------~v~f~~SGsEA~e~AiklAr~~tg---------------r~~ii~~~~~yHG 181 (454)
T 4ao9_A 127 LLEGRLARLICERFPQIE----------QLRFTNSGTEANLMALTAALHFTG---------------RRKIVVFSGGYHG 181 (454)
T ss_dssp SSHHHHHHHHHHHSTTCS----------EEEEESSHHHHHHHHHHHHHHHHT---------------CCEEEEETTCBCS
T ss_pred HHHHHHHHHHHHhCCCCC----------EEEEeCchHHHHHHHHHHHHhccc---------------CCeEEEEeCCcCC
Confidence 345566667777764322 468999999999999999987531 1244444332
Q ss_pred chHHHHHHhcc-----CCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHHHHHh
Q psy9807 206 TELEVVMLDWL-----GKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIGQVCR 276 (561)
Q Consensus 206 ~s~~kaa~~~g-----~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~~ia~ 276 (561)
.+.. +....+ .....+| ..|++.+++.|++ . +....+|++.-...+.|.+-| |++|.++|+
T Consensus 182 ~t~~-~~~~~~~~~~~~~~~~~p----~nd~~~l~~~l~~--~---~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~ 251 (454)
T 4ao9_A 182 GVLG-FGARPSPTTVPFDFLVLP----YNDAQTARAQIER--H---GPEIAVVLVEPMQGASGCIPGQPDFLQALRESAT 251 (454)
T ss_dssp TTCB-BSSSBCTTSCCSEEEEEC----TTCHHHHHHHHHH--T---GGGEEEEEECSEESTTTCEECCHHHHHHHHHHHH
T ss_pred cccc-ccccccCccCCCCcccCC----CchHHHHHHHHhh--c---CCceEEEEeccccCCCCccCCchhhHHHHHHHHh
Confidence 1110 000011 1233444 5688999999977 2 225677888777778898888 999999999
Q ss_pred hcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecCh
Q psy9807 277 QKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDP 333 (561)
Q Consensus 277 ~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~ 333 (561)
+||++|++|..+.| .....+..-..|+ ..|.+++ .|.++.-++.|++..+..
T Consensus 252 ~~g~lLI~DEV~tG--R~G~~~a~e~~gv-~PDi~t~--gK~lggG~Piga~~~~~e 303 (454)
T 4ao9_A 252 QVGALLVFDEVMTS--RLAPHGLANKLGI-RSDLTTL--GKYIGGGMSFGAFGGRAD 303 (454)
T ss_dssp HHTCEEEEECTTGG--GGSTTCHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECHH
T ss_pred hcCCEEEEECCCcC--CCccccchhccCC-CCcEEEe--ccccCCCCcceeeeeHHH
Confidence 99999999998874 2222222212234 4688765 577776677788887653
No 228
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.27 E-value=5.4e-09 Score=110.50 Aligned_cols=179 Identities=13% Similarity=0.008 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+.+.++.+.|.+++..+.. ...+|++|||+||..|+..||.... ..+++.+...
T Consensus 107 ~~~~~lae~L~~~~p~~~~--------~~v~f~~sGsEA~e~AlklAr~~t~---------------r~~ii~~~~~yHG 163 (456)
T 4atq_A 107 EGYVAVTEQLNRLTPGDHA--------KRTVLFNSGAEAVENAVKVARLATG---------------RDAVVAFDHAYHG 163 (456)
T ss_dssp HHHHHHHHHHHHHSSCSSC--------EEEEEESSHHHHHHHHHHHHHHHHC---------------CCEEEEETTCCCC
T ss_pred HHHHHHHHHHHHhCCCCCC--------cEEEEeCChHHHHHHHHHHHhhhhc---------------CCeEEEEecccCC
Confidence 3445566777887643211 1357899999999999999987531 1244444333
Q ss_pred chHHHHHHhc------------cCCeEEeeC-C------CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc
Q psy9807 206 TELEVVMLDW------------LGKMLDLPK-E------FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD 266 (561)
Q Consensus 206 ~s~~kaa~~~------------g~~v~~v~~-~------~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id 266 (561)
.+..-....+ ...+..+|. . ....+.+.+++.++.......+..+.+|++.-.....|.+-
T Consensus 164 ~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~ 243 (456)
T 4atq_A 164 RTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIV 243 (456)
T ss_dssp SSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBC
T ss_pred ccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccc
Confidence 2221111110 113555654 1 11233455555554310111233677788876666777775
Q ss_pred C----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecCh
Q psy9807 267 C----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKDP 333 (561)
Q Consensus 267 p----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~~ 333 (561)
| +++|.++|++||+.|++|..+.|......-+..-..|+ ..|.+++. |.++.-+..|++..++.
T Consensus 244 p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lggg~P~~av~~~~~ 311 (456)
T 4atq_A 244 PAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMA--KGIAGGLPLSAITGRAD 311 (456)
T ss_dssp CCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSCEEEEEEHH
T ss_pred cchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCC-CCchhhhh--hcccCcCCceeeEecHH
Confidence 5 99999999999999999999887554443333222344 47988875 77777677888888753
No 229
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.21 E-value=1.7e-09 Score=117.27 Aligned_cols=174 Identities=9% Similarity=-0.032 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHhcCC---CccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-
Q psy9807 130 LEVVMLDWLGKMLDL---PKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC- 205 (561)
Q Consensus 130 lE~~~~~~la~l~g~---~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~- 205 (561)
.|..+..|+.+..+. +.. ....++|+|+++++..++.+...+.+- .+ ++.+++....
T Consensus 144 r~~ia~~~~~~~~~~~~~~~~-------~~~I~~t~G~~eal~~~~~~l~~~~l~-----~~-------Gd~Vlv~~P~y 204 (546)
T 2zy4_A 144 SEKIVRQYIIREMGADAIPSE-------SVNLFAVEGGTAAMAYIFESLKLNGLL-----KA-------GDKVAIGMPVF 204 (546)
T ss_dssp HHHHHHHHHHHHTTCTTSCGG-------GEEEEEEEHHHHHHHHHHHHHHHTTSS-----CT-------TCEEEEEESCC
T ss_pred HHHHHHHHHHHhccCCCCCCC-------cceEEEECCHHHHHHHHHHHhhhhhcC-----CC-------CCEEEEeCCCC
Confidence 344455676766543 211 025788999988876665542111000 00 2244444444
Q ss_pred chHHHHHHhc--cCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC---HHHHHHHH--
Q psy9807 206 TELEVVMLDW--LGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC---LEEIGQVC-- 275 (561)
Q Consensus 206 ~s~~kaa~~~--g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp---l~eI~~ia-- 275 (561)
.....++.+. |.+++.+|. . ++.+|+++|++.+.. .+.+|+++..++.||.+-+ +++|+++|
T Consensus 205 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~--------~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~ 276 (546)
T 2zy4_A 205 TPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP--------AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAE 276 (546)
T ss_dssp HHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST--------TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC--------CCeEEEEECCCCCCCccCCHHHHHHHHHHHHh
Confidence 4444455443 567888887 3 356999999887754 5677777788889999876 66678888
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecCh
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDP 333 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~ 333 (561)
++||+++++|.+|+.... . ...........+.+..+++|+++.|. -+|+++..+.
T Consensus 277 ~~~~~~ii~De~y~~~~~-~--~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 277 HRPDLMILTDDVYGTFAD-D--FQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp TCTTCEEEEECTTGGGST-T--CCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred ccCCcEEEEeCcchhhcc-c--CcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECCH
Confidence 889999999999985432 1 11111111123678899999997553 3788887654
No 230
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.21 E-value=5.5e-09 Score=110.88 Aligned_cols=320 Identities=11% Similarity=0.026 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc---
Q psy9807 129 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC--- 205 (561)
Q Consensus 129 ~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~--- 205 (561)
+.+.++.+.|.++.+.+-+ ...|++|||+||-.|+..||.....+ +.+ ...+++.....
T Consensus 111 ~~~~~lAe~L~~~~p~~~~---------~v~f~~sGsEA~e~AiKlAr~~~~~~---g~~------~r~~ii~~~~~yHG 172 (473)
T 4e3q_A 111 DQTVMLSEKLVEVSPFDSG---------RVFYTNSGSEANDTMVKMLWFLHAAE---GKP------QKRKILTRWNAYHG 172 (473)
T ss_dssp HHHHHHHHHHHHHSSCSSC---------EEEEESSHHHHHHHHHHHHHHHHHHT---TCT------TCCEEEEETTCCCC
T ss_pred HHHHHHHHHHHhhCCCCcc---------EEEEeCchHHHHHHHHHHHHHHHHhc---CCC------CcceEEEeeceECC
Confidence 4455667778888754321 46899999999999999998754322 111 01234444333
Q ss_pred chHHHHHHhcc-----------CCeEEeeC-C------CCcc-------ChhhHHHHHhhhchhhcCCceEEEEEecCCC
Q psy9807 206 TELEVVMLDWL-----------GKMLDLPK-E------FLAC-------SGGKGGGVIQRKSDREMCSDLLQVVATLGTT 260 (561)
Q Consensus 206 ~s~~kaa~~~g-----------~~v~~v~~-~------~g~~-------d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt 260 (561)
.++.-. .+.+ ..+..++. . .+.. ..++|++.|.+ . ....+.+|++.-...
T Consensus 173 ~t~~a~-s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~--~~~~iAavi~EPiqg 247 (473)
T 4e3q_A 173 VTAVSA-SMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQR--E--GADTIAGFFAEPVMG 247 (473)
T ss_dssp SSHHHH-HHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHH--H--CGGGEEEEEECSSBS
T ss_pred Cccccc-cccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHh--h--CCCceEEEEeCCccC
Confidence 222211 1211 12334443 1 1111 12345555543 1 123566777776666
Q ss_pred CCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccCccccceeeecCCcccccc-ccceeEEecChhh
Q psy9807 261 NCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWLKDPSW 335 (561)
Q Consensus 261 ~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~r~~~~ 335 (561)
..|.+-| +++|.++|++||+.|++|..+.|+.....-+..-..++ ..|.+++ -|.++.- +..|++++++.-
T Consensus 248 ~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~t~--~K~l~gG~~Pl~av~~~~~i- 323 (473)
T 4e3q_A 248 AGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAIIS--SKNLTAGFFPMGAVILGPEL- 323 (473)
T ss_dssp TTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEEEE--CGGGGTTSSCCEEEEECHHH-
T ss_pred CCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChHHh--cccccCCCCCcccccccHHH-
Confidence 6677654 99999999999999999999887644433222222334 4688876 5888654 567888886642
Q ss_pred HHHhhcc----CCCccccCCCCCCCCCCcccccCcCCcchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC---C
Q psy9807 336 VVNAFNV----DPLYLKHDQQGSAPDYRHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSD---D 408 (561)
Q Consensus 336 l~~~~~~----~~~yl~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~ 408 (561)
. +.+.. ...+.. ..+-....+...+++..+....-+.++++..++..+|.+.|+++ |
T Consensus 324 ~-~~~~~~~~~~~~~~h---------------g~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~ 387 (473)
T 4e3q_A 324 S-KRLETAIEAIEEFPH---------------GFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERP 387 (473)
T ss_dssp H-HHHHHHHHHHSCCCC---------------CCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTST
T ss_pred H-HHhcccccccccccc---------------CCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1 11211 011100 01111233444334443332222345566667788888888764 3
Q ss_pred CeEEeccccccc-eeeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcc
Q psy9807 409 RFEVIYEVLMGL-VCFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 487 (561)
Q Consensus 409 g~~l~~~~~~~~-v~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~ 487 (561)
.+.=+ ...++ +.+.+.. +... -
T Consensus 388 ~v~~v--RG~Gl~~gielv~------------------------------------------------------~~~~-~ 410 (473)
T 4e3q_A 388 NIGEY--RGIGFMWALEAVK------------------------------------------------------DKAS-K 410 (473)
T ss_dssp TEEEE--EEETTEEEEEECS------------------------------------------------------BTTT-T
T ss_pred CeeEE--eecceEEEEEEec------------------------------------------------------Cccc-c
Confidence 22100 01111 1111100 0000 0
Q ss_pred eeeecCCCcHHHHHHHHHHHhCCcEEEEeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9807 488 VCFRLKGPNEINEKLLKRINGNGKIHLVPSKIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKE 556 (561)
Q Consensus 488 v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~ 556 (561)
.. +.........+.+.+.+.|.+. .+. | ..+|++. ....+++|||++++.++++.+++.++
T Consensus 411 ~~--~~~~~~~~~~~~~~~~~~Gll~-~~~---g-~~i~l~P-PL~it~~eid~~~~~l~~al~~v~ae 471 (473)
T 4e3q_A 411 TP--FDGNLSVSERIANTCTDLGLIC-RPL---G-QSVVLCP-PFILTEAQMDEMFDKLEKALDKVFAE 471 (473)
T ss_dssp BC--CCGGGCHHHHHHHHHHHTTEEC-EEE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc--ccccHHHHHHHHHHHHHCCcEE-Eec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0111234567888899998654 222 2 2688863 35678999999999999999888765
No 231
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.19 E-value=7.1e-10 Score=115.33 Aligned_cols=220 Identities=10% Similarity=-0.021 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc----ceEEec
Q psy9807 128 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA----NLIASP 203 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~----~~vv~~ 203 (561)
.++.+.+.+|+. ..|.+-. .....++|+|+++++..++.+..+. ++ .+++..
T Consensus 71 ~~lr~aia~~~~-~~g~~~~------~~~~i~~t~G~~~al~~~~~~l~~~-----------------Gd~~~~~Vlv~~ 126 (391)
T 3bwn_A 71 PELEDAIKDLHG-VVGNAAT------EDRYIVVGTGSTQLCQAAVHALSSL-----------------ARSQPVSVVAAA 126 (391)
T ss_dssp HHHHHHHHHHHH-HHCSBCC------SSSEEEEEEHHHHHHHHHHHHHHHT-----------------SSSSSEEEEECS
T ss_pred HHHHHHHHHHHH-hcCCCCC------CCCeEEEeCChHHHHHHHHHHhcCC-----------------CCCCcceEEEcC
Confidence 778888888877 4455321 0125789999999987766553211 12 344444
Q ss_pred cc-chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceE
Q psy9807 204 AC-TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWL 282 (561)
Q Consensus 204 s~-~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~l 282 (561)
.. .++..+++..|.+++.++.+ .+.++ .+ .+.+|+.+..++.||.+-+ +|++.++.+++++
T Consensus 127 P~y~~~~~~~~~~g~~~~~~~~d-----~~~l~---~~--------~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~i 188 (391)
T 3bwn_A 127 PFYSTYVEETTYVRSGMYKWEGD-----AWGFD---KK--------GPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKV 188 (391)
T ss_dssp SCCTHHHHHHHTTCBTTEEEEEE-----STTCC---CC--------SCEEEEEESSCTTTCCCCC--CCC-----CCCEE
T ss_pred CCchhHHHHHHHcCCeEEEecCC-----HHHcC---CC--------CCEEEEECCCCCCCchhHH--HHHHHhhcCCCEE
Confidence 44 66667778888888888752 22222 12 4567777888889999875 5544222233999
Q ss_pred EechhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCcc
Q psy9807 283 HVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHW 361 (561)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (561)
++|.+|+.. .... +......+.+..++||.++.|. -+|.+++.++..+...... ..+...
T Consensus 189 i~De~y~~~-----~~~~-l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~-~~~~~~------------ 249 (391)
T 3bwn_A 189 IHDFAYYWP-----HYTP-ITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEY-IIVNSI------------ 249 (391)
T ss_dssp EEECTTCST-----TTSC-CCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHH-HHHHHS------------
T ss_pred EEeCCCCCC-----CCCc-cccCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHH-hccccc------------
Confidence 999999731 1111 1112234788999999887553 2587777555443322111 011000
Q ss_pred cccCcCCcchHHHHHHHHHhh------------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q psy9807 362 QIPLGRRFRSLKLWFVLRLLG------------VKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY 414 (561)
Q Consensus 362 ~~~~sr~~~al~lw~~l~~~g------------~~g~~~~~~~~~~la~~l~~~l~~~~g~~l~~ 414 (561)
....+..+++...+. ...++++.++..+..+++.+.|++.|++++..
T Consensus 250 ------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 308 (391)
T 3bwn_A 250 ------GVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPK 308 (391)
T ss_dssp ------SCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCC
T ss_pred ------CCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence 011222222222222 23567778888889999999999988877654
No 232
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.66 E-value=1.3e-11 Score=130.90 Aligned_cols=165 Identities=15% Similarity=0.029 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHhcC-CCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecccc
Q psy9807 128 TELEVVMLDWLGKMLD-LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPACT 206 (561)
Q Consensus 128 ~~lE~~~~~~la~l~g-~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~~ 206 (561)
++.+.++.+.++++++ .+ ..+|++|||+||..|+.+||.... .++++++...|
T Consensus 139 ~~~~~~Lae~L~~~~p~~~-----------~v~~~nSGseA~~~Aik~ar~~tg---------------r~~ii~~~~~y 192 (465)
T 2yky_A 139 TENEALFAEAVCDRFPSID-----------LVRFTNSGTEANLMALATATAITG---------------RKTVLAFDGGY 192 (465)
Confidence 4455566667777773 32 468999999999999998874311 12334333221
Q ss_pred -h-HHHHH---HhccC--CeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccC----HHHHHHHH
Q psy9807 207 -E-LEVVM---LDWLG--KMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDC----LEEIGQVC 275 (561)
Q Consensus 207 -s-~~kaa---~~~g~--~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idp----l~eI~~ia 275 (561)
. ...+. ...|. .+..+| ..|+++|+++|++ . +..+.+|++....+++|.+.| +++|.++|
T Consensus 193 HG~~~~~~sg~~~~g~~~~~~~~~----~~d~~~l~~~l~~--~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~ 263 (465)
T 2yky_A 193 HGGLLNFASGHAPTNAPYHVVLGV----YNDVEGTADLLKR--H---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEA 263 (465)
Confidence 1 11111 01122 223333 3589999999975 2 125666777666666898777 99999999
Q ss_pred hhcCceEEechhcccccccCccccccccCccccceeeecCCccccccccceeEEecC
Q psy9807 276 RQKDVWLHVDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTFDCSAMWLKD 332 (561)
Q Consensus 276 ~~~~~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~g~g~l~~r~ 332 (561)
++||+++++|.+|+ + ...+.+.....++ ..|.+ ++.|+++.....|+++.++
T Consensus 264 ~~~g~llI~DEv~~-~-r~g~~~a~~~~gv-~pDi~--t~sK~lg~G~piG~v~~~~ 315 (465)
T 2yky_A 264 SRCGALLIFDEVMT-S-RLSGGGAQEMLGI-SADLT--TLGKYIGGGMSFGAFGGRR 315 (465)
Confidence 99999999999998 4 2221111001122 24765 4679999766677777654
No 233
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=98.99 E-value=2.9e-08 Score=103.52 Aligned_cols=188 Identities=13% Similarity=0.005 Sum_probs=116.8
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccc
Q psy9807 119 FTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 198 (561)
Q Consensus 119 ~~~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 198 (561)
..|.......++-+.+.+|+.+..+.+-. .+.-..++|.||++|...++.+..+.. .+.
T Consensus 66 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~-----~~~i~i~~t~G~~~al~~~~~~l~~~~----------------~d~ 124 (405)
T 3k7y_A 66 KPYLLGNGTEDFSTLTQNLIFGNNSKYIE-----DKKICTIQCIGGTGAIFVLLEFLKMLN----------------VET 124 (405)
T ss_dssp CCCCTTSSCHHHHHHHHHHHHCSSCTTTT-----TTCEEEEEEEHHHHHHHHHHHHHHTTT----------------CCE
T ss_pred CCCCCCCCcHHHHHHHHHHHcCCCCcccc-----ccceEEEEcCchHHHHHHHHHHHHhcC----------------CCE
Confidence 34555556678888999998665443211 000025889999988766655432100 124
Q ss_pred eEEeccc-chHHHHHHhccCCeEEeeC-C--CCccChhhHHHHHhhhchhhcCCceEEEEEec-CCCCCcccc---CHHH
Q psy9807 199 LIASPAC-TELEVVMLDWLGKMLDLPK-E--FLACSGGKGGGVIQRKSDREMCSDLLQVVATL-GTTNCCAFD---CLEE 270 (561)
Q Consensus 199 ~vv~~s~-~s~~kaa~~~g~~v~~v~~-~--~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~-gtt~tG~id---pl~e 270 (561)
+++.... .....+++..|.+++.+|. + ++.+|+++|++++.+ .. .+.+++++. ..+.||.+- .+++
T Consensus 125 Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--~~----~~~~i~l~~~~~NPTG~~~s~~~~~~ 198 (405)
T 3k7y_A 125 LYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRN--IP----NGSSVILQISCYNPCSVNIEEKYFDE 198 (405)
T ss_dssp EEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHH--SC----SSCEEEECCSSCTTTCCCCCHHHHHH
T ss_pred EEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHh--CC----CCeEEEEeCCCCCCCCCCCCHHHHHH
Confidence 5555445 4455567889999999998 3 589999999999975 21 233555544 368889885 5677
Q ss_pred HHHHHhhcCceEEechhcccccccCcc-----ccccccCccccceeeecCCcccccc-ccceeEEe--cChh
Q psy9807 271 IGQVCRQKDVWLHVDAAYAGSAFICPE-----NRYLMKGVELADSFNFNPHKWMLVT-FDCSAMWL--KDPS 334 (561)
Q Consensus 271 I~~ia~~~~~~lhVDaA~gg~~~~~~~-----~~~~~~gi~~aDsi~~~~HK~l~~P-~g~g~l~~--r~~~ 334 (561)
|+++|++||+|+++|.+|.....-..+ .+.+.. ...--.+..++.|.++.| .-+|.+.+ .+.+
T Consensus 199 l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~ 269 (405)
T 3k7y_A 199 IIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEE-KNIAFSVCQSFSKNMSLYGERAGALHIVCKNQE 269 (405)
T ss_dssp HHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHT-TTCCEEEEEECTTTSCCTTTTEEEEEEECSSHH
T ss_pred HHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHh-cCCcEEEEeeCCccCCCccccceEEEEEeCCHH
Confidence 888999999999999999853321000 111111 101125578999999855 44676643 4543
No 234
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=98.99 E-value=6.5e-09 Score=109.36 Aligned_cols=223 Identities=13% Similarity=-0.035 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHHHHhcCC--CccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEecc
Q psy9807 127 CTELEVVMLDWLGKMLDL--PKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPA 204 (561)
Q Consensus 127 ~~~lE~~~~~~la~l~g~--~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s 204 (561)
..++++.+.+|+.+..+. ++ ...++|+|+|+++..++.+..... ...+ + ..++.+++...
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~---------~~iv~t~G~~~al~~~~~~l~~~~-----~~~~-~---~~Gd~Vlv~~P 163 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKD---------RYIVFGVGVTQLIHGLVISLSPNM-----TATP-D---APESKVVAHAP 163 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTT---------CEEEEESHHHHHHHHHHHHHSCCT-----TTCT-T---SCCEEEEECSS
T ss_pred hHHHHHHHHHHHHHhCCcCCCC---------CEEEEeCCHHHHHHHHHHHHhhcc-----cccc-C---CCCCEEEEeCC
Confidence 578999999998875442 22 257899999999876665430000 0000 0 00123444444
Q ss_pred c-chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEE
Q psy9807 205 C-TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 205 ~-~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lh 283 (561)
. .++...++..|.+++. +.+|+++|++++.+ .+.+|+++..++.||.+-+ + +++ +++..
T Consensus 164 ~y~~~~~~~~~~g~~~~~-----~~~d~~~l~~~~~~--------~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i 223 (427)
T 2hox_A 164 FYPVFREQTKYFDKKGYV-----WAGNAANYVNVSNP--------EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSI 223 (427)
T ss_dssp CCHHHHHHHHHSCBTTEE-----EEEEGGGGTTCSCG--------GGEEEEEESSCTTTCCCCC-C----SST--TCEEE
T ss_pred CcccHHHHHHHcCCeeee-----ecCCHHHHHHhhcC--------CceEEEEcCCCCCcccccH-H----HHc--CCCEE
Confidence 4 5556666777777653 35788999888765 4567777888889999988 3 333 56778
Q ss_pred echhcccccccCccccccccCccccceeeecCCccccccc-cceeEEecChhhHHHhhccCCCccccCCCCCCCCCCccc
Q psy9807 284 VDAAYAGSAFICPENRYLMKGVELADSFNFNPHKWMLVTF-DCSAMWLKDPSWVVNAFNVDPLYLKHDQQGSAPDYRHWQ 362 (561)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~HK~l~~P~-g~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (561)
.|.++-... ...... . ...+.+..++||.++.|. -+|.++++++..+....... .+..
T Consensus 224 ~d~~~~~~~---~s~~~~-~--~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~-~~~~-------------- 282 (427)
T 2hox_A 224 YDMVYYWPH---YTPIKY-K--ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYM-TKNT-------------- 282 (427)
T ss_dssp EECTTCSTT---TSCCCS-C--BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHH-HHHT--------------
T ss_pred EeecccCCC---CCcccc-C--CCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHH-HhcC--------------
Confidence 887653210 000111 0 234899999999887552 27888886655443322111 0000
Q ss_pred ccCcCCcchHHHHHHHHHhhH-------------HHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q psy9807 363 IPLGRRFRSLKLWFVLRLLGV-------------KYLQEYIRKQISLAKEFEQLVRSDDRFEV 412 (561)
Q Consensus 363 ~~~sr~~~al~lw~~l~~~g~-------------~g~~~~~~~~~~la~~l~~~l~~~~g~~l 412 (561)
.....+..+++...+.. .-+++..++..+..+++.+.|++.|++++
T Consensus 283 ----~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 341 (427)
T 2hox_A 283 ----EGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSY 341 (427)
T ss_dssp ----SSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEEC
T ss_pred ----CCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccc
Confidence 00112222222222221 22345566777888999999999888876
No 235
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=98.80 E-value=4.3e-07 Score=94.91 Aligned_cols=186 Identities=10% Similarity=-0.109 Sum_probs=106.8
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCccccccCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceE
Q psy9807 121 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLI 200 (561)
Q Consensus 121 ~~~sp~~~~lE~~~~~~la~l~g~~~~~~~~~~~~~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~v 200 (561)
|.......++-+.+.+++ +|-.... +....+-|.|||.|...|+......+.. | ++.++
T Consensus 83 Y~p~~G~p~lr~aia~~~---~g~~~~~-----~~~~~~qt~ggtga~~~a~~~l~~~~~~------p-------gd~V~ 141 (420)
T 4h51_A 83 YLPISGYQPFIDEAVKII---YGNTVEL-----ENLVAVQTLSGTGAVSLGAKLLTRVFDA------E-------TTPIY 141 (420)
T ss_dssp CCCTTCCHHHHHHHHHHH---HC---CG-----GGEEEEEEEHHHHHHHHHHHHHTTTSCT------T-------TSCEE
T ss_pred CCCcCChHHHHHHHHHHh---cCCCccc-----cccceeeecCchHHHHHHHHHHHHhcCC------C-------CCEEE
Confidence 444444456666666554 2321110 0123466899999987776554322110 0 22344
Q ss_pred EecccchH-HHHHHhccCC-eEEeeC---CCCccChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHH
Q psy9807 201 ASPACTEL-EVVMLDWLGK-MLDLPK---EFLACSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIG 272 (561)
Q Consensus 201 v~~s~~s~-~kaa~~~g~~-v~~v~~---~~g~~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~ 272 (561)
+....+.. ....+..|.+ +...+. +...+|.+.+.+.++. . .....+++.+...+.||.. +.+++|+
T Consensus 142 ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~--~---~~~~~vll~~~p~NPtG~~~~~~~~~~i~ 216 (420)
T 4h51_A 142 LSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILA--A---PDGSVFILHQCAHNPTGVDPSQEQWNEIA 216 (420)
T ss_dssp EEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHH--S---CSSCEEEEESSSCTTTCCCCCHHHHHHHH
T ss_pred EecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhc--c---CCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Confidence 44444443 3445677776 545554 5567899998888865 2 2244566667777888887 4778899
Q ss_pred HHHhhcCceEEechhcccccccCccccc-cc-cCccc--cceeeecCCccccccc-cceeEEecC
Q psy9807 273 QVCRQKDVWLHVDAAYAGSAFICPENRY-LM-KGVEL--ADSFNFNPHKWMLVTF-DCSAMWLKD 332 (561)
Q Consensus 273 ~ia~~~~~~lhVDaA~gg~~~~~~~~~~-~~-~gi~~--aDsi~~~~HK~l~~P~-g~g~l~~r~ 332 (561)
++|+++++++..|.+|.+...-..+... .. ...+. -=.++.++.|.++.+. =+|.+.+..
T Consensus 217 ~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~ 281 (420)
T 4h51_A 217 SLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLL 281 (420)
T ss_dssp HHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEEC
T ss_pred HHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecc
Confidence 9999999999999999864322111110 00 00011 1245679999887653 267666543
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.78 E-value=1.7e-07 Score=106.11 Aligned_cols=96 Identities=10% Similarity=0.016 Sum_probs=58.5
Q ss_pred hhHHHHHhhhchh--hcCCceEEEEEecC-CCCCccccC----HHHHHHHHhhcCceEEechhcccccccCccccccccC
Q psy9807 232 GKGGGVIQRKSDR--EMCSDLLQVVATLG-TTNCCAFDC----LEEIGQVCRQKDVWLHVDAAYAGSAFICPENRYLMKG 304 (561)
Q Consensus 232 ~~Le~~i~~~~~~--~~g~~p~~vv~t~g-tt~tG~idp----l~eI~~ia~~~~~~lhVDaA~gg~~~~~~~~~~~~~g 304 (561)
++|++.|++ .. ..+..+.+|++.-. ....|.+-| +++|.++|++||+++++|.++.|.......+..-..|
T Consensus 577 ~~le~~l~~--~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~g 654 (831)
T 4a0g_A 577 AYLSKHLQE--HSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLG 654 (831)
T ss_dssp HHHHHHC-----------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHS
T ss_pred HHHHHHHHh--hhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcC
Confidence 466676653 21 12235666666554 455676655 9999999999999999999887654433322111123
Q ss_pred ccccceeeecCCcccccc-ccceeEEecC
Q psy9807 305 VELADSFNFNPHKWMLVT-FDCSAMWLKD 332 (561)
Q Consensus 305 i~~aDsi~~~~HK~l~~P-~g~g~l~~r~ 332 (561)
+ ..|.++ ..|.|+.= ...|+++.++
T Consensus 655 v-~PDiit--lsK~L~gG~~Plgav~~~~ 680 (831)
T 4a0g_A 655 C-KPDIAC--FAKLLTGGMVPLAVTLATD 680 (831)
T ss_dssp S-CCSEEE--ECGGGGTTSSCCEEEEECH
T ss_pred C-CCcEEE--EecccccCccCcEEEEECH
Confidence 3 358765 67988753 2457777754
No 237
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=96.08 E-value=0.0046 Score=66.09 Aligned_cols=73 Identities=22% Similarity=0.408 Sum_probs=67.1
Q ss_pred eeecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhh--hhhhcceeeecCC
Q psy9807 422 CFRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY--EVLMGLVCFRLKG 494 (561)
Q Consensus 422 ~f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~--~~~~~~v~f~~~~ 494 (561)
.+.+.++.++.+++++.+++|..++.+|.+++.+.+++.+++++++.+.|++.|+|+++. +|.+++++|++.+
T Consensus 356 ~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p 430 (511)
T 3vp6_A 356 SYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIP 430 (511)
T ss_dssp GGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECC
T ss_pred ccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeC
Confidence 455667788999999999999999999999999999999999999999999999999998 7999999999864
No 238
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=92.27 E-value=0.11 Score=54.85 Aligned_cols=68 Identities=54% Similarity=0.920 Sum_probs=63.1
Q ss_pred eecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 423 FRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 423 f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
+.+.++.++.+++++.+++|..++.+|.+++.+.+++.+++++++++.|++.|+|+++.+|.+++++|
T Consensus 348 ~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f 415 (481)
T 4e1o_A 348 TDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVF 415 (481)
T ss_dssp CCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEE
T ss_pred CCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEE
Confidence 34566778889999999999999999999999999999999999999999999999999999999999
No 239
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=92.22 E-value=0.093 Score=55.26 Aligned_cols=66 Identities=62% Similarity=1.132 Sum_probs=58.0
Q ss_pred cccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 425 LKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 425 ~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
+.++.++.+++++.+++|..++.+|.+++.+.+++.+++++++.+.|++.|+|+++.+|.+++++|
T Consensus 343 ~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f 408 (475)
T 3k40_A 343 YRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCF 408 (475)
T ss_dssp ------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEE
T ss_pred cccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEE
Confidence 345666888999999999999999999999999999999999999999999999999999999999
No 240
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=90.04 E-value=0.23 Score=52.78 Aligned_cols=71 Identities=25% Similarity=0.417 Sum_probs=63.7
Q ss_pred ecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCC
Q psy9807 424 RLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKG 494 (561)
Q Consensus 424 ~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~ 494 (561)
++..+.++.+++++.+++|+.++.+|.+++.+.+++.+++++++++.|++.++|+++.+|.+++++|++.+
T Consensus 370 ~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p 440 (515)
T 2jis_A 370 DTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVP 440 (515)
T ss_dssp CCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECC
T ss_pred CCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeC
Confidence 34445668889999999999999999999999999999999999999999999999998989999998743
No 241
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=88.25 E-value=0.38 Score=50.82 Aligned_cols=72 Identities=22% Similarity=0.413 Sum_probs=64.8
Q ss_pred eecccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhh--hhhhcceeeecCC
Q psy9807 423 FRLKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIY--EVLMGLVCFRLKG 494 (561)
Q Consensus 423 f~~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~--~~~~~~v~f~~~~ 494 (561)
+.+..+.++.+|+++.+++|+.++.+|.+++.+.+++.+++++++++.|++.++|+++. +|.++++||++.+
T Consensus 354 ~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~ 427 (504)
T 2okj_A 354 YDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIP 427 (504)
T ss_dssp GCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECC
T ss_pred CCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeC
Confidence 44556677889999999999999999999999999999999999999999999999988 6899999999754
No 242
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=85.88 E-value=0.58 Score=49.08 Aligned_cols=66 Identities=65% Similarity=1.198 Sum_probs=59.8
Q ss_pred cccCccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceee
Q psy9807 425 LKHWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 425 ~~~~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f 490 (561)
+.++.++.+++++.+++|..++.+|.+++.+.+++..++++++.+.|++.|+|+++.+|.+++++|
T Consensus 346 ~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f 411 (486)
T 1js3_A 346 YRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCF 411 (486)
T ss_dssp GGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEE
T ss_pred ccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEE
Confidence 344566788889999999999999999999999999999999999999999999988888899988
No 243
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=85.66 E-value=0.49 Score=49.83 Aligned_cols=81 Identities=23% Similarity=0.377 Sum_probs=66.0
Q ss_pred CccccccccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcceeeecCCCcHHHHHHHHHHH
Q psy9807 428 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRLKGPNEINEKLLKRIN 507 (561)
Q Consensus 428 ~~~~~~~~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~ 507 (561)
+.++.+|+++.+++|+.++.+|.+++.+.+++..++++++.+.|++.++|+++.+|.+++++|++.+.+.....+...+.
T Consensus 367 ~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~ 446 (497)
T 2qma_A 367 KSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNKALR 446 (497)
T ss_dssp ---CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHHHHH
T ss_pred cCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHHHHH
Confidence 34467788999999999999999999999999999999999999999999998899999999999764432233444444
Q ss_pred h
Q psy9807 508 G 508 (561)
Q Consensus 508 ~ 508 (561)
+
T Consensus 447 ~ 447 (497)
T 2qma_A 447 L 447 (497)
T ss_dssp H
T ss_pred H
Confidence 3
No 244
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=84.60 E-value=0.87 Score=47.19 Aligned_cols=60 Identities=17% Similarity=0.251 Sum_probs=52.8
Q ss_pred cccc-chhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhh----hhhcceeeec
Q psy9807 433 GRRF-RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE----VLMGLVCFRL 492 (561)
Q Consensus 433 ~~~~-~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~----~~~~~v~f~~ 492 (561)
++.. ..+.+|..++.+|.+++.+.+++..++++++.+.|++.++|+++.+ +.+++++|++
T Consensus 304 ~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~ 368 (452)
T 2dgk_A 304 SRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKL 368 (452)
T ss_dssp SCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEE
T ss_pred CChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEe
Confidence 3444 5678899999999999999999999999999999999999999876 6789999987
No 245
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=62.02 E-value=4.5 Score=41.87 Aligned_cols=117 Identities=10% Similarity=0.051 Sum_probs=75.6
Q ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCc---hhhhhhhhhhcce-eeecC----CCcHHHHHHHHHHHhC
Q psy9807 438 SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDD---RFEVIYEVLMGLV-CFRLK----GPNEINEKLLKRINGN 509 (561)
Q Consensus 438 ~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~---~~~~~~~~~~~~v-~f~~~----~~~~~~~~l~~~L~~~ 509 (561)
++++|+.++.+|.+++.+.+++.+++++++.+.|++.+ +++++..+..++- ++... ..+.....+.-.+...
T Consensus 301 sL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~ 380 (450)
T 3bc8_A 301 SLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTR 380 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEecCC
Confidence 47899999999999999999999999999999999888 7777665543321 12111 0011123444455443
Q ss_pred ---CcEEEE----------ee-------eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9807 510 ---GKIHLV----------PS-------KIRDVYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLK 555 (561)
Q Consensus 510 ---g~~~~~----------~~-------~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~ 555 (561)
|.-... .. .......+=+ +++.-++++|+++++++|+++.+++.+
T Consensus 381 g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~-~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 381 QVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNA-AAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp TCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEE-ECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccceeeecccccchhHHHHHHcCCeeecCCCCcEEE-EecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 333220 00 0111223433 466778999999999999998766544
No 246
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=56.31 E-value=8 Score=40.22 Aligned_cols=51 Identities=12% Similarity=0.266 Sum_probs=46.3
Q ss_pred hHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcc-Cchhhhhhhhhhcceee
Q psy9807 440 KLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRS-DDRFEVIYEVLMGLVCF 490 (561)
Q Consensus 440 k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~-~~~~~~~~~~~~~~v~f 490 (561)
-.|..++.+|..++.+.+++..++++++.+.|++ .++++++.+|..++++|
T Consensus 330 a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~ 381 (497)
T 3mc6_A 330 GCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISF 381 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEE
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEE
Confidence 3789999999999999999999999999999999 58999888888888887
No 247
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=55.50 E-value=9.6 Score=39.55 Aligned_cols=122 Identities=11% Similarity=0.075 Sum_probs=77.9
Q ss_pred ccchhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCch---hhhhhhhh-hcceeeecCCC----cHHHHHHHHHH
Q psy9807 435 RFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDR---FEVIYEVL-MGLVCFRLKGP----NEINEKLLKRI 506 (561)
Q Consensus 435 ~~~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~---~~~~~~~~-~~~v~f~~~~~----~~~~~~l~~~L 506 (561)
.+..+++|+.+..+|.+++++.+++.+++++++.+.|++... -+++..|. ---+++..... +.....+-..|
T Consensus 316 ~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~L 395 (501)
T 3hl2_A 316 ASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSML 395 (501)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHH
Confidence 456788999999999999999999999999999999998544 34443331 11112222211 11233556666
Q ss_pred HhC---CcEEEEeee---ECC--------------EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy9807 507 NGN---GKIHLVPSK---IRD--------------VYFLRMAVCSRYSESSDMIYSWNEIKTLTEELLKEE 557 (561)
Q Consensus 507 ~~~---g~~~~~~~~---~~g--------------~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~~~~~~ 557 (561)
... |--.+.+.. +.| ..++=+. +..-++++|||.+++.|+++..++.++.
T Consensus 396 f~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a-~aiG~~~~~v~~~~~~l~~~~~~~~~~~ 465 (501)
T 3hl2_A 396 FTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAA-SAIGMKMQDVDLFIKRLDRCLKAVRKER 465 (501)
T ss_dssp HHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEE-CCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred HhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 654 333332211 111 2355554 5567789999999999999988876544
No 248
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=47.50 E-value=23 Score=32.09 Aligned_cols=51 Identities=12% Similarity=0.039 Sum_probs=41.2
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEE
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lh 283 (561)
.-+-|.+++= .+-.|..|..|++....+..|....++++.++|++||+.+.
T Consensus 143 ~GHTEAavdL--arLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 143 RGHTEAAVQL--STLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKII 193 (204)
T ss_dssp CCHHHHHHHH--HHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEE
T ss_pred CCcHHHHHHH--HHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEE
Confidence 3455666655 66788899999998876677999999999999999998764
No 249
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=39.47 E-value=20 Score=37.49 Aligned_cols=56 Identities=16% Similarity=0.252 Sum_probs=51.6
Q ss_pred chhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhh-hhhcceeeec
Q psy9807 437 RSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYE-VLMGLVCFRL 492 (561)
Q Consensus 437 ~~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~-~~~~~v~f~~ 492 (561)
..+..|..++.+|.+++.+.+++.+++++++++.|++.++|+++.+ |.+++++|++
T Consensus 324 ~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~ 380 (502)
T 3hbx_A 324 QVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSL 380 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEe
Confidence 4578999999999999999999999999999999999999999887 8899999965
No 250
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=39.45 E-value=44 Score=30.29 Aligned_cols=51 Identities=8% Similarity=0.065 Sum_probs=41.2
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecC-CCCCccccCHHHHHHHHhhcCceEE
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLG-TTNCCAFDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~g-tt~tG~idpl~eI~~ia~~~~~~lh 283 (561)
..+-|.+++= .+-.|..|..|++... .+..|.....+++.++|++||+.+.
T Consensus 142 ~GhTEaavdL--arlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~i 193 (206)
T 3mio_A 142 PGHTEAAVDL--ARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALI 193 (206)
T ss_dssp CCHHHHHHHH--HHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEE
T ss_pred CChHHHHHHH--HHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 3466677766 6778989999988873 4467999999999999999998864
No 251
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=35.24 E-value=54 Score=31.00 Aligned_cols=63 Identities=8% Similarity=-0.171 Sum_probs=41.6
Q ss_pred CCc-cChhhHHHHHhhhchhhcCCceEEEEEecC-C---CCCccccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 226 FLA-CSGGKGGGVIQRKSDREMCSDLLQVVATLG-T---TNCCAFDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 226 ~g~-~d~~~Le~~i~~~~~~~~g~~p~~vv~t~g-t---t~tG~idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
.|. .+++.+..+++. ....|.....++- -| + +++=..-+|..|..+.+.+++.+++|..|+++
T Consensus 137 ~G~~~t~~e~~~Av~~--i~~~Gn~~i~L~~-RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g 204 (262)
T 1zco_A 137 RGMGNTIQELLYSAEY--IMAQGNENVILCE-RGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAG 204 (262)
T ss_dssp CCTTCCHHHHHHHHHH--HHTTTCCCEEEEE-CCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTC
T ss_pred cCCCCCHHHHHHHHHH--HHHCCCCeEEEEE-CCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCC
Confidence 344 378899888877 6666754333333 23 1 22222237788888888889999999999854
No 252
>3kfu_G Glutamyl-tRNA(Gln) amidotransferase subunit C; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=34.29 E-value=1.4e+02 Score=23.02 Aligned_cols=60 Identities=10% Similarity=0.030 Sum_probs=39.7
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCCCHHHHHH
Q psy9807 11 NGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMS 74 (561)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~ 74 (561)
.=+.+.++.++..++..++- .|.+|++.+.+-.+ ..+.| ....+.+..|..+..-+++|+
T Consensus 16 ~LArL~l~eeE~~~~~~~l~-~Il~~ve~L~evDt-~~VeP--~~~~lReD~v~~~~~~e~~L~ 75 (92)
T 3kfu_G 16 TLAKIRLSPEEEALLLQDLK-RILDFVDALPRVEE-GGAEE--ALGRLREDEPRPSLPQAEALA 75 (92)
T ss_dssp HHTTCCCCHHHHHHHHHHHH-HHHHHHHTCCCCCC-CCCCC--CCCCCBCSCCCCCCCHHHHHT
T ss_pred HHhCCCCCHHHHHHHHHHHH-HHHHHHHHHHhcCC-CCCCC--CcCCCCCCCCCCCCCHHHHHH
Confidence 33566788888777776644 48889998876553 23444 455566666777777777654
No 253
>3ip4_C Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: a.137.12.1 PDB: 2df4_C 2dqn_C* 2g5h_C 2g5i_C* 2f2a_C
Probab=32.71 E-value=1.6e+02 Score=23.16 Aligned_cols=64 Identities=13% Similarity=0.071 Sum_probs=41.3
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCCCCcccccccCCCCCCCCCCCHHHHHH
Q psy9807 10 KNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRD---RRVLPTVEPGYLRPLIPETAPDTPDTWQEVMS 74 (561)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~ 74 (561)
-.=+.+.++.++..++..++-+ |.+|++.+.+ ..|-|-..+-++...+.+..|..+..-+++|+
T Consensus 13 A~LArL~l~eeE~~~~~~~l~~-Il~~ve~L~evDt~~VeP~~~~~~~~~~lReD~v~~~~~~e~~L~ 79 (100)
T 3ip4_C 13 ANLARLQISPEETEEMANTLES-ILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALK 79 (100)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHH-HHHHHGGGGGSCCTTCCCCSCCSCCCCCCBCSCCCCCCCHHHHHT
T ss_pred HHHcCCCCCHHHHHHHHHHHHH-HHHHHHHHhhcCCCCCCcccccccccCCCCCCCCCCCCCHHHHHH
Confidence 3335667888887776655444 7778877654 33445445555566677777777777777765
No 254
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=31.96 E-value=64 Score=29.51 Aligned_cols=50 Identities=14% Similarity=0.059 Sum_probs=39.3
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEE
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lh 283 (561)
..+=|.+++= .+-.|..|..|++..- ...|......++.++|++||+.+.
T Consensus 151 ~GhTEAavdL--arLAGl~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~i 200 (217)
T 1g57_A 151 GGHTEATIDL--MTLAGFKPAGVLCELT-NDDGTMARAPECIEFANKHNMALV 200 (217)
T ss_dssp CSHHHHHHHH--HHHTTSCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEE
T ss_pred CCcHHHHHHH--HHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEE
Confidence 4455666655 6678889998888765 456889999999999999998754
No 255
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=30.59 E-value=69 Score=29.46 Aligned_cols=50 Identities=4% Similarity=-0.068 Sum_probs=40.3
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEE
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lh 283 (561)
.-+=|..++= .+-.|..|..|++..-. ..|.....+++.++|++||+.+.
T Consensus 162 ~GHTEaaVdL--arlAGl~Pa~VicEi~~-ddG~mar~~~l~~fA~~h~l~~i 211 (227)
T 1snn_A 162 QGHTEMTVAL--AELANLVPITTICEMMG-DDGNAMSKNETKRYAEKHNLIYL 211 (227)
T ss_dssp CSHHHHHHHH--HHHTTSCSEEEEEEEBC-TTSSBCCHHHHHHHHHHHTCCEE
T ss_pred CCchHHHHHH--HHHcCCCceEEEEEEeC-CCCCcCCHHHHHHHHHHcCCcEE
Confidence 3456666665 66789999999988774 45999999999999999998764
No 256
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=29.71 E-value=48 Score=31.94 Aligned_cols=56 Identities=9% Similarity=-0.065 Sum_probs=40.6
Q ss_pred cChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHHHHhhcCceEEechhcc
Q psy9807 229 CSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 229 ~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~ia~~~~~~lhVDaA~g 289 (561)
+++++++.+++. ..+.|.. -++++-.|++. +.-+ ++..|..+.+ .++.+.+|..|+
T Consensus 166 ~t~~ei~~ave~--i~~~Gn~-~iiL~erg~~y-~~~~~~vdl~~i~~lk~-~~~PV~~D~sHs 224 (298)
T 3fs2_A 166 LAPWDMKNVLAK--ITESGNP-NVLATERGVSF-GYNTLVSDMRALPIMAG-LGAPVIFDATHS 224 (298)
T ss_dssp CCGGGHHHHHHH--HHTTTCC-CEEEEECCEEC-SSSCEECCTTHHHHHHT-TTSCEEEEHHHH
T ss_pred CCHHHHHHHHHH--HHHcCCC-eEEEEECCCCC-CCCCCccCHHHHHHHHH-cCCcEEEcCCCc
Confidence 588888888877 6666643 34555555544 4333 7999988776 999999999987
No 257
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=29.63 E-value=62 Score=32.49 Aligned_cols=63 Identities=6% Similarity=-0.097 Sum_probs=44.0
Q ss_pred CCc-cChhhHHHHHhhhchhhcCCceEEEEEecCCCCC-c---cccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 226 FLA-CSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNC-C---AFDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 226 ~g~-~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~t-G---~idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
.|. .+++++..+++. ....|... ++++-.|++.. . ..-++..|..+.+..++.+.+|.+|+++
T Consensus 256 ~G~~~t~~e~~~Ave~--i~~~Gn~~-i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 256 RGLSATIEEFIGAAEY--IMSQGNGK-IILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCTTCCHHHHHHHHHH--HHTTTCCC-EEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred cCCCCCHHHHHHHHHH--HHHcCCCe-EEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 344 788999998887 66677543 44444444432 2 1238888988888899999999999853
No 258
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=29.02 E-value=47 Score=31.82 Aligned_cols=57 Identities=12% Similarity=0.035 Sum_probs=40.7
Q ss_pred cChhhHHHHHhhhchhhcCCceEEEEEecCCCCCcccc---CHHHHHHHHhhc-CceEEechhcc
Q psy9807 229 CSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFD---CLEEIGQVCRQK-DVWLHVDAAYA 289 (561)
Q Consensus 229 ~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~id---pl~eI~~ia~~~-~~~lhVDaA~g 289 (561)
+++++++.+++. ..+.|.. -++++..|++. +.-+ ++..|..+.+.. |+.+.+|..|+
T Consensus 145 ~t~~ei~~ave~--i~~~Gn~-~i~L~erg~~y-~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs 205 (285)
T 3sz8_A 145 MSPTQLKHVVSK--CGEVGND-RVMLCERGSSF-GYDNLVVDMLGFRQMAETTGGCPVIFDVTHS 205 (285)
T ss_dssp SCGGGTHHHHHH--HHHTTCC-CEEEEECCEEC-SSSCEECCTTHHHHHHHHTTSCCEEEETTTT
T ss_pred CCHHHHHHHHHH--HHHcCCC-cEEEEeCCCCC-CCCcCccCHHHHHHHHHhCCCCCEEEeCCCc
Confidence 578888888876 6666643 34555555544 4333 799998888877 79999999987
No 259
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=28.48 E-value=53 Score=31.61 Aligned_cols=77 Identities=16% Similarity=0.115 Sum_probs=48.3
Q ss_pred chHHHHHHhccCCeEEeeCCCCc-cChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHHHHHhhc-Cc
Q psy9807 206 TELEVVMLDWLGKMLDLPKEFLA-CSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIGQVCRQK-DV 280 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~~~g~-~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~~ia~~~-~~ 280 (561)
..+.+.+. ...+.+.+.. |. .+++++..+++. ....|.. -++++-.|++. +.- -++..|..+.+.. ++
T Consensus 122 ~~Ll~~~a-~~~kPV~lk~--G~~~t~~ei~~Av~~--i~~~Gn~-~i~L~~rg~~~-~y~~~~~dl~~i~~lk~~~~~~ 194 (292)
T 1o60_A 122 TDLVEAMA-KTGAVINVKK--PQFLSPSQMGNIVEK--IEECGND-KIILCDRGTNF-GYDNLIVDMLGFSVMKKASKGS 194 (292)
T ss_dssp HHHHHHHH-HTTCEEEEEC--CTTSCGGGHHHHHHH--HHHTTCC-CEEEEECCEEC-STTCEECCTTHHHHHHHHTTSC
T ss_pred HHHHHHHH-cCCCcEEEeC--CCCCCHHHHHHHHHH--HHHcCCC-eEEEEECCCCC-CCCccccCHHHHHHHHhhCCCC
Confidence 44555432 2234444543 33 367788888876 6666643 34444444443 333 3899999887777 89
Q ss_pred eEEechhcc
Q psy9807 281 WLHVDAAYA 289 (561)
Q Consensus 281 ~lhVDaA~g 289 (561)
.+.+|..|+
T Consensus 195 pV~~D~sH~ 203 (292)
T 1o60_A 195 PVIFDVTHS 203 (292)
T ss_dssp CEEEEHHHH
T ss_pred CEEEECCCc
Confidence 999999998
No 260
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=28.47 E-value=77 Score=30.16 Aligned_cols=63 Identities=8% Similarity=-0.226 Sum_probs=42.3
Q ss_pred CCc-cChhhHHHHHhhhchhhcCCceEEEEEecCC-CCCc---cccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 226 FLA-CSGGKGGGVIQRKSDREMCSDLLQVVATLGT-TNCC---AFDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 226 ~g~-~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt-t~tG---~idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
.|. .++++++.+++. ....|... ++++--|+ +..+ ..-++..|..+.+.+++.+.+|..|+.+
T Consensus 152 ~G~~~t~~ei~~Ave~--i~~~Gn~~-i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g 219 (276)
T 1vs1_A 152 RGFGNTVEELLAAAEY--ILLEGNWQ-VVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAG 219 (276)
T ss_dssp CCTTCCHHHHHHHHHH--HHHTTCCC-EEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHC
T ss_pred CCCCCCHHHHHHHHHH--HHHcCCCe-EEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 444 488999999887 66677533 33332133 3323 3347888888877789999999999854
No 261
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=28.06 E-value=53 Score=34.10 Aligned_cols=46 Identities=17% Similarity=0.250 Sum_probs=39.9
Q ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhccCchhhhhhhh
Q psy9807 438 SLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEV 483 (561)
Q Consensus 438 ~~k~w~~~~~~g~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~ 483 (561)
.+..|..++.+|..++.+.+++..++++++.+.|++.++++++.++
T Consensus 360 ~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 405 (514)
T 3mad_A 360 SATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP 405 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC
Confidence 3568899999999999999999999999999999998887776554
No 262
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=27.61 E-value=57 Score=31.18 Aligned_cols=77 Identities=14% Similarity=0.120 Sum_probs=48.4
Q ss_pred chHHHHHHhccCCeEEeeCCCCc-cChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHHHHHhhc-Cc
Q psy9807 206 TELEVVMLDWLGKMLDLPKEFLA-CSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIGQVCRQK-DV 280 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~~~g~-~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~~ia~~~-~~ 280 (561)
..+.+.+. ...+.+.+.+ |. .+++++..+++. ....|.. -++++-.|++. +.- -++..|..+.+.+ ++
T Consensus 119 ~~ll~~~a-~~~kPV~lk~--G~~~t~~e~~~A~~~--i~~~Gn~-~i~L~~rg~~~-~~~~~~~dl~~i~~lk~~~~~~ 191 (280)
T 2qkf_A 119 TDLVVAMA-KTGNVVNIKK--PQFLSPSQMKNIVEK--FHEAGNG-KLILCERGSSF-GYDNLVVDMLGFGVMKQTCGNL 191 (280)
T ss_dssp HHHHHHHH-HTCCEEEEEC--CTTSCGGGHHHHHHH--HHHTTCC-CEEEEECCEEC-STTCEECCTTHHHHHHHHTTTC
T ss_pred HHHHHHHH-cCCCcEEEEC--CCCCCHHHHHHHHHH--HHHcCCC-eEEEEECCCCC-CCCccccCHHHHHHHHHhCCCC
Confidence 44555542 2234444543 33 367788888776 5666643 34444445444 443 3888999888887 89
Q ss_pred eEEechhcc
Q psy9807 281 WLHVDAAYA 289 (561)
Q Consensus 281 ~lhVDaA~g 289 (561)
.+.+|..|+
T Consensus 192 pV~~D~sH~ 200 (280)
T 2qkf_A 192 PVIFDVTHS 200 (280)
T ss_dssp CEEEEHHHH
T ss_pred CEEEECCCC
Confidence 999999998
No 263
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=27.12 E-value=72 Score=31.54 Aligned_cols=63 Identities=8% Similarity=-0.135 Sum_probs=43.1
Q ss_pred CCc-cChhhHHHHHhhhchhhcCCceEEEEEecCC-CCCc---cccCHHHHHHHHhhcCceEEechhcccc
Q psy9807 226 FLA-CSGGKGGGVIQRKSDREMCSDLLQVVATLGT-TNCC---AFDCLEEIGQVCRQKDVWLHVDAAYAGS 291 (561)
Q Consensus 226 ~g~-~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gt-t~tG---~idpl~eI~~ia~~~~~~lhVDaA~gg~ 291 (561)
.|. .+++++..+++. ....|...+++ +..|+ +..+ ..-++..|..+.+.+++.+.+|..|+.+
T Consensus 220 ~G~~~tl~ei~~Ave~--i~~~GN~~viL-ceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 220 RGFMNTIEEFLLSAEY--IANSGNTKIIL-CERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGG 287 (350)
T ss_dssp CCTTCCHHHHHHHHHH--HHHTTCCCEEE-EECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHC
T ss_pred CCCCCCHHHHHHHHHH--HHHCCCCeEEE-EeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCc
Confidence 444 488999998887 66677544434 43333 2222 2247888888888889999999999854
No 264
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=26.51 E-value=53 Score=31.18 Aligned_cols=75 Identities=13% Similarity=-0.003 Sum_probs=43.8
Q ss_pred chHHHHHHhccCCeEEeeCCCCc-cChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccc---cCHHHHHHHHhhcCce
Q psy9807 206 TELEVVMLDWLGKMLDLPKEFLA-CSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAF---DCLEEIGQVCRQKDVW 281 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~~~g~-~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~i---dpl~eI~~ia~~~~~~ 281 (561)
..+.+.+. .....+.+.. |. .+++++..+++. ....|.. -++++-.|++. +.- -++..|..+.+. + .
T Consensus 108 ~~ll~~~a-~~~~PV~lK~--G~~~t~~e~~~Av~~--i~~~GN~-~i~L~~rG~~~-~y~~~~~dl~~i~~lk~~-~-p 178 (267)
T 2nwr_A 108 TDLLLAAA-KTGRAVNVKK--GQFLAPWDTKNVVEK--LKFGGAK-EIYLTERGTTF-GYNNLVVDFRSLPIMKQW-A-K 178 (267)
T ss_dssp HHHHHHHH-TTTSEEEEEC--CTTCCGGGGHHHHHH--HHHTTCS-SEEEEECCEEC-SSSCEECCTTHHHHHTTT-S-E
T ss_pred HHHHHHHH-cCCCcEEEeC--CCCCCHHHHHHHHHH--HHHcCCC-eEEEEECCCCC-CCCccccCHHHHHHHHHc-C-C
Confidence 44444432 2234455553 33 456677777766 5556643 34444444433 332 378888877555 7 9
Q ss_pred EEechhcc
Q psy9807 282 LHVDAAYA 289 (561)
Q Consensus 282 lhVDaA~g 289 (561)
+.||.+|+
T Consensus 179 VivD~sH~ 186 (267)
T 2nwr_A 179 VIYDATHS 186 (267)
T ss_dssp EEEETTGG
T ss_pred EEEcCCcc
Confidence 99999998
No 265
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=26.21 E-value=64 Score=28.91 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=34.2
Q ss_pred ChhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcC--ceEEechhcc
Q psy9807 230 SGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKD--VWLHVDAAYA 289 (561)
Q Consensus 230 d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~--~~lhVDaA~g 289 (561)
|.+.|+++++. + .-.++. .+|.+..|+++.+.++++| +.+|+|-..|
T Consensus 18 ~~~~l~~al~s--~------~~~ifl-----l~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~G 66 (192)
T 3kts_A 18 NQKDMEKILEL--D------LTYMVM-----LETHVAQLKALVKYAQAGGKKVLLHADLVNG 66 (192)
T ss_dssp SSHHHHHHTTS--S------CCEEEE-----CSEETTTHHHHHHHHHHTTCEEEEEGGGEET
T ss_pred CHHHHHHHHcC--C------CCEEEE-----ecCcHHHHHHHHHHHHHcCCeEEEecCchhc
Confidence 67889998876 2 112222 2357789999999999997 6789997655
No 266
>3h0l_C Glutamyl-tRNA(Gln) amidotransferase subunit C; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_C 3h0r_C*
Probab=26.15 E-value=1.8e+02 Score=22.43 Aligned_cols=62 Identities=13% Similarity=0.225 Sum_probs=40.2
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCCCCcccccccCCCCCCCCCCCHHHHHH
Q psy9807 11 NGSIIMGDVNEFKDFAKAMVDYVGNYLENIRD---RRVLPTVEPGYLRPLIPETAPDTPDTWQEVMS 74 (561)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~ 74 (561)
.=+.+.++.++...+..++-+ |.+|++.+.+ ..|-|-..+-++ ..+.+..|..+..-+++++
T Consensus 12 ~LArL~l~eee~~~~~~~l~~-Il~~ve~L~evDt~~VeP~~~~~~~-~~lReD~v~~~~~~e~~L~ 76 (94)
T 3h0l_C 12 KLARLELKEEEIEVFQKQLSD-ILDFIDQLKELDTENVEPYIQEFEE-TPMREDEPHPSLDREKALM 76 (94)
T ss_dssp HHTTCCCCHHHHHHHHHHHHH-HHHHTTTGGGSCCTTCCCCCCCCSS-CCCBCSCCCCCCCHHHHHT
T ss_pred HHcCCCCCHHHHHHHHHHHHH-HHHHHHHHhccCCCCcCcccCcccc-cCCCCCCCCCCCCHHHHHH
Confidence 335667888887776655444 7778777543 334454455555 6677777777777777765
No 267
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=25.22 E-value=66 Score=29.96 Aligned_cols=37 Identities=19% Similarity=0.131 Sum_probs=28.9
Q ss_pred ceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechh
Q psy9807 249 DLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAA 287 (561)
Q Consensus 249 ~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA 287 (561)
...+|+.|-|.++.|. +|+ +.+++++++|+-+|+=|-
T Consensus 10 ~k~iillTDG~~~~g~-~p~-~aa~~a~~~gi~v~tIGi 46 (242)
T 3rag_A 10 IRQILVITDGCSNIGP-DPV-EAARRAHRHGIVVNVIGI 46 (242)
T ss_dssp EEEEEEEESSCCCSSS-CHH-HHHHHHHHTTCEEEEEEE
T ss_pred ccEEEEEccCCCCCCC-CHH-HHHHHHHHCCCEEEEEEe
Confidence 4567889999988886 777 556789999998877543
No 268
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=24.39 E-value=27 Score=35.86 Aligned_cols=31 Identities=23% Similarity=0.187 Sum_probs=27.9
Q ss_pred CCCCCccccCHHHHHHHHhhcCceEEechhc
Q psy9807 258 GTTNCCAFDCLEEIGQVCRQKDVWLHVDAAY 288 (561)
Q Consensus 258 gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~ 288 (561)
..+-.|..++++++++-||++|+.+++|..+
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4567899999999999999999999999863
No 269
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=24.10 E-value=47 Score=31.91 Aligned_cols=57 Identities=11% Similarity=0.059 Sum_probs=40.2
Q ss_pred cChhhHHHHHhhhchhhcCCc-----eEEEEEecCCCCCcccc---CHHHHHHHHhhcCceEEechhcc
Q psy9807 229 CSGGKGGGVIQRKSDREMCSD-----LLQVVATLGTTNCCAFD---CLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 229 ~d~~~Le~~i~~~~~~~~g~~-----p~~vv~t~gtt~tG~id---pl~eI~~ia~~~~~~lhVDaA~g 289 (561)
+++++++.+++. ..+.|.. .-++.+..|++. +.-+ ++..|..+.+ .++.+.+|..|+
T Consensus 142 ~t~~e~~~ave~--i~~~Gn~~~~~~~~i~L~erg~~y-~~~~~~vdl~~i~~lk~-~~~pV~~D~sHs 206 (288)
T 3tml_A 142 LAPHDMKNVIDK--ARDAAREAGLSEDRFMACERGVSF-GYNNLVSDMRSLAIMRE-TNAPVVFDATHS 206 (288)
T ss_dssp CCTTHHHHHHHH--HHHHHHTTTCCSCCEEEEECCEEC-SSSCEECCHHHHHHGGG-GSSCEEEEHHHH
T ss_pred CCHHHHHHHHHH--HHHcCCCccCCCCcEEEEeCCCCC-CCCcCcCCHHHHHHHHh-cCCcEEEcCCcc
Confidence 578888888776 5555530 335555566654 4444 8999988765 999999999997
No 270
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=23.87 E-value=90 Score=25.55 Aligned_cols=47 Identities=11% Similarity=0.025 Sum_probs=30.3
Q ss_pred hhhHHHHHhhhchhhcCCceEEEEEecCCCCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 231 GGKGGGVIQRKSDREMCSDLLQVVATLGTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 231 ~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
.+.....+++ ..+.|-+ .|+.+.|.. + +++.++|+++|+.+. ..+.|
T Consensus 68 ~~~v~~~v~e--~~~~g~k--~v~~~~G~~-----~--~e~~~~a~~~Girvv-~nC~g 114 (122)
T 3ff4_A 68 PQNQLSEYNY--ILSLKPK--RVIFNPGTE-----N--EELEEILSENGIEPV-IGCTL 114 (122)
T ss_dssp HHHHGGGHHH--HHHHCCS--EEEECTTCC-----C--HHHHHHHHHTTCEEE-ESCHH
T ss_pred HHHHHHHHHH--HHhcCCC--EEEECCCCC-----h--HHHHHHHHHcCCeEE-CCcCe
Confidence 3445555555 5455533 467777653 2 799999999999887 34443
No 271
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=23.81 E-value=86 Score=28.91 Aligned_cols=50 Identities=10% Similarity=0.005 Sum_probs=38.9
Q ss_pred hhHHHHHhhhchhhcCCceEEEEEecCCCC----------CccccCHHHHHHHHhhcCceEE
Q psy9807 232 GKGGGVIQRKSDREMCSDLLQVVATLGTTN----------CCAFDCLEEIGQVCRQKDVWLH 283 (561)
Q Consensus 232 ~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~----------tG~idpl~eI~~ia~~~~~~lh 283 (561)
-+-|.+++= .+-.|..|..|++....-. .|.....+++.++|++||+.+.
T Consensus 152 GHTEAaVDL--arLAGl~PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~ii 211 (233)
T 1k4i_A 152 GHTEAGVEL--CRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVC 211 (233)
T ss_dssp SHHHHHHHH--HHHTTCCSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEE
T ss_pred ChHHHHHHH--HHHcCCCceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 355666655 6677889998888766441 5899999999999999999764
No 272
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=22.10 E-value=5e+02 Score=24.97 Aligned_cols=98 Identities=11% Similarity=0.032 Sum_probs=52.8
Q ss_pred CCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccceEEeccc-chHHHHH------HhccCCeEEeeCCCCc
Q psy9807 156 GGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLIASPAC-TELEVVM------LDWLGKMLDLPKEFLA 228 (561)
Q Consensus 156 ~~g~~t~ggT~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~vv~~s~-~s~~kaa------~~~g~~v~~v~~~~g~ 228 (561)
+..++|-+.|...+..+..|.+. +.++.||+.+ .....+. .-.|+.+..++
T Consensus 122 g~~ILTh~~S~tv~~~l~~A~~~-----------------gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~----- 179 (315)
T 3ecs_A 122 GATILTHAYSRVVLRVLEAAVAA-----------------KKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVL----- 179 (315)
T ss_dssp TEEEEECSCCHHHHHHHHHHHTT-----------------TCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEEC-----
T ss_pred CCEEEEcCCcHHHHHHHHHHHHc-----------------CCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEe-----
Confidence 35688877665544444433211 2356667666 2222222 22467777776
Q ss_pred cChhhHHHHHhhhchhhcCCceEEEEEecCCCCCc-cccCH--HHHHHHHhhcCceEEec
Q psy9807 229 CSGGKGGGVIQRKSDREMCSDLLQVVATLGTTNCC-AFDCL--EEIGQVCRQKDVWLHVD 285 (561)
Q Consensus 229 ~d~~~Le~~i~~~~~~~~g~~p~~vv~t~gtt~tG-~idpl--~eI~~ia~~~~~~lhVD 285 (561)
| .++...+++ .-++++....-...| .++.+ -.++-.|+.||+++.|=
T Consensus 180 -D-sa~~~~m~~--------vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 180 -D-AAVGYIMEK--------ADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp -G-GGHHHHGGG--------CSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred -h-hHHHHHHHh--------CCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 1 233333433 233455554444444 34444 45788899999998873
No 273
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.93 E-value=2.6e+02 Score=24.70 Aligned_cols=36 Identities=8% Similarity=-0.071 Sum_probs=18.0
Q ss_pred chHHHHHHhccCCeEEeeCCCCccChhhHHHHHhhhchhhcC
Q psy9807 206 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQRKSDREMC 247 (561)
Q Consensus 206 ~s~~kaa~~~g~~v~~v~~~~g~~d~~~Le~~i~~~~~~~~g 247 (561)
..+...+.+.+.++.... --+.++++..+++ .++.|
T Consensus 107 ~~~~~~~~ll~~~i~~~~----~~~~~e~~~~i~~--l~~~G 142 (196)
T 2q5c_A 107 VDKHEIEAMLGVKIKEFL----FSSEDEITTLISK--VKTEN 142 (196)
T ss_dssp SCHHHHHHHHTCEEEEEE----ECSGGGHHHHHHH--HHHTT
T ss_pred hHHHHHHHHhCCceEEEE----eCCHHHHHHHHHH--HHHCC
Confidence 444444455555544444 2244555666655 55555
No 274
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=21.10 E-value=73 Score=30.19 Aligned_cols=24 Identities=4% Similarity=0.155 Sum_probs=20.0
Q ss_pred ccccCHHHHHHHHhhcCceEEech
Q psy9807 263 CAFDCLEEIGQVCRQKDVWLHVDA 286 (561)
Q Consensus 263 G~idpl~eI~~ia~~~~~~lhVDa 286 (561)
...+.++++.++|+++|+.+++|-
T Consensus 87 ~~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 87 TMLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEe
Confidence 345678999999999999998773
No 275
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=20.45 E-value=38 Score=34.67 Aligned_cols=32 Identities=13% Similarity=0.036 Sum_probs=28.0
Q ss_pred CCCCCccccCHHHHHHHHhhcCceEEechhcc
Q psy9807 258 GTTNCCAFDCLEEIGQVCRQKDVWLHVDAAYA 289 (561)
Q Consensus 258 gtt~tG~idpl~eI~~ia~~~~~~lhVDaA~g 289 (561)
..+..|..++++++++-||++|+.+++|..+.
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 35667999999999999999999999998743
Done!