Query psy9809
Match_columns 237
No_of_seqs 107 out of 310
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 20:15:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9809.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9809hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kdp_B Sodium/potassium-transp 100.0 1.6E-67 5.6E-72 471.8 8.3 213 1-237 37-285 (286)
2 2zxe_B Na+,K+-ATPase beta subu 100.0 1.2E-66 4E-71 469.7 12.0 215 1-237 55-304 (305)
3 3ixz_B Potassium-transporting 100.0 2.6E-65 8.9E-70 458.3 16.8 203 1-237 59-289 (290)
4 3quw_A Protein MMF1; chorismat 12.7 1E+02 0.0035 24.0 2.2 25 192-216 129-153 (153)
5 1he7_A High affinity nerve gro 10.7 1.6E+02 0.0055 22.0 2.7 25 190-216 4-37 (126)
6 2f41_A Transcription factor FA 10.7 4.5E+02 0.015 18.5 5.8 21 194-214 66-87 (121)
7 1zx8_A Hypothetical protein TM 9.8 2.2E+02 0.0076 21.9 3.2 47 163-209 74-132 (136)
8 4hwn_A FC receptor-like A; FCR 9.7 2.4E+02 0.0082 19.5 3.2 28 188-215 6-34 (108)
9 4a2o_A Eosinophil cationic pro 9.6 2.9E+02 0.0098 21.0 3.8 16 146-161 104-119 (133)
10 2fcg_F Cationic, antibacterial 9.4 2.6E+02 0.0091 15.5 2.5 20 51-70 3-22 (26)
No 1
>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B*
Probab=100.00 E-value=1.6e-67 Score=471.81 Aligned_cols=213 Identities=25% Similarity=0.453 Sum_probs=186.5
Q ss_pred CEEEeeecCCCCceeeecccccCCCCceeecCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHHhhhhcccCC---cC
Q psy9809 1 MKVLLSTLNNHYPRWQLHESIIGTNPGLGYRPMPDDPDQGALIWFKANNHTNVQKWTRKIDDFLERLKNVLNFGH---WA 77 (237)
Q Consensus 1 m~v~~~tld~~~P~~~~~~s~ig~~PGL~~rP~~~~~~~~~~I~f~~~~~~s~~~yv~~l~~fL~~Y~~~~~~~~---~~ 77 (237)
|||||+|||+++|+|| |++ ++||||+||++. .++|+|+++++++|++|+++|++||++|++..|.+. ..
T Consensus 37 m~v~l~TLd~~~Pkyq-d~~---~~PGL~~~P~~~----~~eI~f~~sd~~s~~~yv~~L~~FL~~Y~~~~q~~~~~~~~ 108 (286)
T 3kdp_B 37 IQVMLLTISEFKPTYQ-DRV---APPGLTQIPQSQ----KTEISFRPNDPQSYESYVVSIVRFLEKYKDLAQKDDMIFED 108 (286)
T ss_dssp HHGGGSCSCSSSCSCC-TTT---CSCCCCBSSCCS----SSEEECCSSCTTTTHHHHHHHHHHHTTCCTTTSCSTTTEEC
T ss_pred HHHHHHhCcccCCccc-CCC---CCCcceeccCCC----ceEEEEECCChhhHHHHHHHHHHHHHHhcchhhcccccccc
Confidence 7999999999999999 886 899999999983 678999999999999999999999999999766332 35
Q ss_pred CCC--cc---c--cc-------cc-cccccccCCC--CCC---CCCCCC------ceeeCeeeccccCCCCCCCCCCh-h
Q psy9809 78 FKH--TE---K--FQ-------NI-TQIYGWEPQY--YEN---IGELPP------EIIYGWEPQYYENIGELPPEMPE-S 130 (237)
Q Consensus 78 c~~--~~---~--~~-------~~-F~~~~lg~Cs--~~~---y~~g~P------NrI~gw~P~~y~~~~~lp~~~P~-~ 130 (237)
|+. +. + ++ .+ |++++||+|| .++ |++|+| ||||||+|++|. .+.|++||. +
T Consensus 109 C~~~~~~~~~~~~~~~~~~~~~~C~F~~~~lg~Csg~~d~~fGY~~g~PCI~lKlNRIig~~P~~~~--~~~~~~~p~~~ 186 (286)
T 3kdp_B 109 CGNVPSELKERGEYNNERGERKVCRSRLEWLGNCSGLNDETYGYKDGKPCVIIKLNRVLGFKPKPPK--NESLETYPVMK 186 (286)
T ss_dssp CCSSCCCCCCCCCSSSSSSSCCEECCCGGGSTTSCCCCSSSCCCCSSSCCBCBCCCCCBTCCCCCCC--SSSCSSCSSSC
T ss_pred cccCcccceeccccccCCCCCceeEeccccccCCCCCCCCCCCcCCCCCeEEEEeccccceeecccC--CCCcccccchh
Confidence 621 11 1 11 12 9999999999 455 899999 999999999873 345678887 6
Q ss_pred HHHHhhhcccccccccceeeEeeeecCCCCCCCCcceEEeCCC---CCCCccccccCC---CCCCCCeEEEEecCCCCCc
Q psy9809 131 LKKHINDTALGDILKMQTVWVSCDGESPADREHIGPVEIYPQH---GTPGYYYPYENK---EGYLSPVLAVHFKNPKLNT 204 (237)
Q Consensus 131 L~~~i~~~~~~~~~~~~~iwv~C~g~~~~d~e~lg~i~Y~P~~---gfp~~YfPy~n~---~~Y~~PlVAVqf~n~~~n~ 204 (237)
|+ .+.|||+|+|++++|.|++|+|+|||.+ |||++||||+|+ ++|+||||||||.|+++|+
T Consensus 187 l~-------------~~~i~V~C~~~~~~d~e~ig~i~YyP~~g~~gfp~~YfPYygk~~~~~YlqPLVAVqf~n~~~n~ 253 (286)
T 3kdp_B 187 YN-------------PYVLPVHCTGKRDEDKEKVGTMEYFGLGGYPGFPLQYYPYYGKLLQPKYLQPLMAVQFTNLTMDT 253 (286)
T ss_dssp CT-------------TTBCCEEEESSSSSCCCCCCCBCCCCTTSCSSCBTTSCSBCTTTSCTTCCCCCCCBCBCCSCCSC
T ss_pred cc-------------CCceeeeccCcCccccccccceEEcCCCCCCCCCcccCCCCCCcCCCCCcCCeEEEEeecCCCCc
Confidence 55 2479999999999999999999999996 599999999987 9999999999999999999
Q ss_pred EEEEEEEeecCCCccCCCCCCcceEEEEEEEeC
Q psy9809 205 LINVDCRAWAKNIIYKKSLVNREGSVHFEIMVD 237 (237)
Q Consensus 205 ~v~VeCk~wAkNI~~~~~~~~~~G~V~F~l~vd 237 (237)
+|+|||||||+||.++ +|++++|+|+|+|+|.
T Consensus 254 ~v~VeCk~~a~NI~~~-~~d~~~G~v~fkl~i~ 285 (286)
T 3kdp_B 254 EIRIECKAYGENIGYS-EKDRFQGRFDVKIEVK 285 (286)
T ss_dssp CCCBEEEECSTTCCCC-SSCTTTTSCCBEEECC
T ss_pred EEEEEEEEeccCCCcC-CCccccceEEEEEEec
Confidence 9999999999999996 8999999999999984
No 2
>2zxe_B Na+,K+-ATPase beta subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_B* 3b8e_B*
Probab=100.00 E-value=1.2e-66 Score=469.67 Aligned_cols=215 Identities=25% Similarity=0.414 Sum_probs=180.9
Q ss_pred CEEEeeecCCCCceeeecccccCCCCceeecCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHHhhhhcccC---CcC
Q psy9809 1 MKVLLSTLNNHYPRWQLHESIIGTNPGLGYRPMPDDPDQGALIWFKANNHTNVQKWTRKIDDFLERLKNVLNFG---HWA 77 (237)
Q Consensus 1 m~v~~~tld~~~P~~~~~~s~ig~~PGL~~rP~~~~~~~~~~I~f~~~~~~s~~~yv~~l~~fL~~Y~~~~~~~---~~~ 77 (237)
|||||+|||+++|+|| ++ | ++||||+||.+ ++++|+|+++++++|++|+++|++||++|+++.|.. ...
T Consensus 55 m~v~l~tl~~~~Pk~q-~~--i-~~PGL~~~P~~----~~~~I~f~~~~~~s~~~yv~~l~~FL~~Y~~~~q~~~~~~~~ 126 (305)
T 2zxe_B 55 IQVLLLTLSDFEPKYQ-DR--V-APPGLSHAPYA----IKTEISFSISNPKSYESFVKSMHKLMDLYNESSQAGNSPFED 126 (305)
T ss_dssp HHHHHHTSCSSSCSCC-TT--T-CSCCBCCSSCC----SSSEEEECTTCGGGTHHHHHHHHHHHGGGCGGGSCSTTTEEC
T ss_pred HHHHHHHccccCCccc-cC--C-CCCeeeEecCC----CCeEEEEeCCChhhHHHHHHHHHHHHHHhcchhhcccccccc
Confidence 6899999999999999 55 3 78999999997 489999999999999999999999999999987644 678
Q ss_pred CCC--------cc---cc--c-cc-cccccccCCCCCC-----CCCCCC------ceeeCeeeccccCCCCCCCCCChhH
Q psy9809 78 FKH--------TE---KF--Q-NI-TQIYGWEPQYYEN-----IGELPP------EIIYGWEPQYYENIGELPPEMPESL 131 (237)
Q Consensus 78 c~~--------~~---~~--~-~~-F~~~~lg~Cs~~~-----y~~g~P------NrI~gw~P~~y~~~~~lp~~~P~~L 131 (237)
|+. +. +. . .+ |++++||+||+.+ |++|+| ||||||+|++|++ ++||+++ |
T Consensus 127 C~~~~~~~~~~g~~~~~~~~~~~C~F~~~~Lg~Cs~~~d~~fGY~~g~PCI~lKlNrI~g~~P~~~~~-~~lP~~~---l 202 (305)
T 2zxe_B 127 CSDTPADYIKRGDLDDSQGQKKACRFSRMWLKNCSGLDDTTYGYAEGKPCVVAKLNRIIGFYPKPLKN-TTDLPEE---L 202 (305)
T ss_dssp CCSSCCCCCCCSSSCSSSSSCCEECCCGGGSTTC--------CCCSSSCCCEEEBCCCBTCCCCCCCT-TSCCTTT---T
T ss_pred CCCcccccccccccccCCCCCceeEeechhccCCCCCCCCCCCcCCCCCeEEEEecceecccccCCcc-ccccHHH---H
Confidence 874 21 11 1 13 9999999999754 899999 9999999998765 5666655 3
Q ss_pred HHHhhhcccccccccceeeEeeeecCCCCCCCCcceEEeCCC---CCCCccccccC---CCCCCCCeEEEEecCCCCCcE
Q psy9809 132 KKHINDTALGDILKMQTVWVSCDGESPADREHIGPVEIYPQH---GTPGYYYPYEN---KEGYLSPVLAVHFKNPKLNTL 205 (237)
Q Consensus 132 ~~~i~~~~~~~~~~~~~iwv~C~g~~~~d~e~lg~i~Y~P~~---gfp~~YfPy~n---~~~Y~~PlVAVqf~n~~~n~~ 205 (237)
+++++ .+.|||+|+|++++|.|++|+|+|||.+ |||++||||+| |++|+||||||||.|+++|++
T Consensus 203 ~~~~~---------~~~I~v~C~~~~~~d~e~~g~i~Y~P~~g~~gfp~~YfPY~gk~~~~~Yl~PLVAVqf~n~~~n~~ 273 (305)
T 2zxe_B 203 QANYN---------QYVLPLRCAAKREEDREKIGSIEYFGLGGYAGFPLQYYPYYGKRLQKKYLQPLLAIQFTNLTQNME 273 (305)
T ss_dssp TTCCT---------TTEEEEEEEC-----CCCCSCEEEECGGGCSEEEGGGCSBCCTTTCTTCCCCEEEEEECCSCCSSC
T ss_pred hhhhc---------cCCCceEeeccccccccccCCeEEECCCCCCCcCccccCCCCccCCcCCcCCeEEEEeecCCCCCE
Confidence 55553 3589999999999999999999999998 79999999998 999999999999999999999
Q ss_pred EEEEEEeecCCCccCCCCCCcceEEEEEEEeC
Q psy9809 206 INVDCRAWAKNIIYKKSLVNREGSVHFEIMVD 237 (237)
Q Consensus 206 v~VeCk~wAkNI~~~~~~~~~~G~V~F~l~vd 237 (237)
|+|||||||+||.++ +|++++|+|+|+|+||
T Consensus 274 v~VeCka~a~NI~~~-~~d~~~G~v~fkl~i~ 304 (305)
T 2zxe_B 274 LRIECKVYGENIDYS-EKDRFRGRFEVKIEVK 304 (305)
T ss_dssp EEEEEEECCSSCCCC-SSCTTSSBCCEEEEEC
T ss_pred EEEEEEEeccCCCcC-CCccccceEEEEEEec
Confidence 999999999999664 8999999999999996
No 3
>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_B 2xzb_B
Probab=100.00 E-value=2.6e-65 Score=458.33 Aligned_cols=203 Identities=19% Similarity=0.277 Sum_probs=181.9
Q ss_pred CEEEeeecCCCCceeeecccccCCCCceeecCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHHhhhhcccCCcCCCC
Q psy9809 1 MKVLLSTLNNHYPRWQLHESIIGTNPGLGYRPMPDDPDQGALIWFKANNHTNVQKWTRKIDDFLERLKNVLNFGHWAFKH 80 (237)
Q Consensus 1 m~v~~~tld~~~P~~~~~~s~ig~~PGL~~rP~~~~~~~~~~I~f~~~~~~s~~~yv~~l~~fL~~Y~~~~~~~~~~c~~ 80 (237)
|||||+|||+++|+|| ++ +++||||+||++. ++++++|+|+++++++|++|+++|++||++|++..|.++..|..
T Consensus 59 m~v~l~Tld~~~Pkyq-d~---~~~PGL~~~P~~~-~~~~~~I~f~~sd~~s~~~yv~~l~~FL~~Y~~~~q~~~~~C~~ 133 (290)
T 3ixz_B 59 IYVLMRTIDPYTPDYQ-DQ---LKSPGVTLRPDVY-GEKGLDISYNVSDSTTWAGLAHTLHRFLAGYSPAAQEGSINCTS 133 (290)
T ss_pred HHHHHHhCCCCCCCcc-cc---cCCCcceecCCCC-CCcceEEEEeCCCchHHHHHHHHHHHHHHHhCchhccCcccCCC
Confidence 7999999999999999 66 3899999999985 56789999999999999999999999999999987766788875
Q ss_pred ccc-----cc-------cc-cccccccCCCC--CC---CCCCCC------ceeeCeeeccccCCCCCCCCCChhHHHHhh
Q psy9809 81 TEK-----FQ-------NI-TQIYGWEPQYY--EN---IGELPP------EIIYGWEPQYYENIGELPPEMPESLKKHIN 136 (237)
Q Consensus 81 ~~~-----~~-------~~-F~~~~lg~Cs~--~~---y~~g~P------NrI~gw~P~~y~~~~~lp~~~P~~L~~~i~ 136 (237)
+.. +. .+ |++++||+||+ ++ |++|+| ||||||+|+.++
T Consensus 134 ~~~~~q~~~~~~~~~~~~C~F~~~~lg~Csg~~d~~fGY~~g~PCI~iKlNrIig~~P~~~~------------------ 195 (290)
T 3ixz_B 134 EKYFFQESFLAPNHTKFSCKFTADMLQNCSGRPDPTFGFAEGKPCFIIKMNRIVKFLPGNST------------------ 195 (290)
T ss_pred ccccccccccCCCCCCceeeccccccCcCCCCCCCCCCcCCCCceEEEEeceEEeeecCCCC------------------
Confidence 541 11 22 99999999997 44 999999 999999998532
Q ss_pred hcccccccccceeeEeeeecCCCCCCCCcceEEeCCC-CCCCcccccc---CCCCCCCCeEEEEecCCCCCcEEEEEEEe
Q psy9809 137 DTALGDILKMQTVWVSCDGESPADREHIGPVEIYPQH-GTPGYYYPYE---NKEGYLSPVLAVHFKNPKLNTLINVDCRA 212 (237)
Q Consensus 137 ~~~~~~~~~~~~iwv~C~g~~~~d~e~lg~i~Y~P~~-gfp~~YfPy~---n~~~Y~~PlVAVqf~n~~~n~~v~VeCk~ 212 (237)
.|||+|++++++|.+++|+|+|||.+ |||++||||+ +|++|+||||||||.|+++|++|+|||||
T Consensus 196 -----------~~~V~C~~~~~~~~~~~~~i~YyP~~ggf~~~YfPYygk~~q~~YlqPLVAVqf~n~~~n~~v~VeCk~ 264 (290)
T 3ixz_B 196 -----------APRVDCAFLDQPRDGPPLQVEYFPANGTYSLHYFPYYGKKAQPHYSNPLVAAKLLNVPRNRDVVIVCKI 264 (290)
T ss_pred -----------CCcceecCCCcccccCcceEEECCCCCCcCceeCCccCCcCCcCCcCCeEEEEEecCCCCcEEEEEEEE
Confidence 59999999987667788899999998 7999999999 79999999999999999999999999999
Q ss_pred ecCCCccCCCCCCcceEEEEEEEeC
Q psy9809 213 WAKNIIYKKSLVNREGSVHFEIMVD 237 (237)
Q Consensus 213 wAkNI~~~~~~~~~~G~V~F~l~vd 237 (237)
||+||.+++++++++|+|+|+|+|+
T Consensus 265 ~a~NI~~d~~~d~~~G~V~Fkl~i~ 289 (290)
T 3ixz_B 265 LAEHVSFDNPHDPYEGKVEFKLKIQ 289 (290)
T ss_pred eccCCccCCCCCCccceEEEEEEec
Confidence 9999999767888999999999985
No 4
>3quw_A Protein MMF1; chorismate mutase fold, intact mitochondria maintenance, mitochondrial protein, protein binding; 1.75A {Saccharomyces cerevisiae}
Probab=12.66 E-value=1e+02 Score=24.04 Aligned_cols=25 Identities=24% Similarity=0.166 Sum_probs=20.3
Q ss_pred eEEEEecCCCCCcEEEEEEEeecCC
Q psy9809 192 VLAVHFKNPKLNTLINVDCRAWAKN 216 (237)
Q Consensus 192 lVAVqf~n~~~n~~v~VeCk~wAkN 216 (237)
-.+|+...++.+..|.|||.|..+|
T Consensus 129 rt~V~V~~L~~~~lVEIeaiA~~pn 153 (153)
T 3quw_A 129 RSCVGVASLPLNVDLEMEVIAVEKN 153 (153)
T ss_dssp EEEEECSCCGGGCSEEEEEEEECC-
T ss_pred EEEEEcccCCCCCEEEEEEEEEeCC
Confidence 3567887888999999999998766
No 5
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=10.73 E-value=1.6e+02 Score=21.95 Aligned_cols=25 Identities=8% Similarity=0.117 Sum_probs=19.6
Q ss_pred CCeEEEEecCCCCCcEEEEEEEe---------ecCC
Q psy9809 190 SPVLAVHFKNPKLNTLINVDCRA---------WAKN 216 (237)
Q Consensus 190 ~PlVAVqf~n~~~n~~v~VeCk~---------wAkN 216 (237)
.|.| ++..+.....+.++|++ |-||
T Consensus 4 pP~I--~l~~~~~~~~~~l~c~v~G~P~P~I~W~kn 37 (126)
T 1he7_A 4 PASV--QLHTAVEMHHWCIPFSVDGQPAPSLRWLFN 37 (126)
T ss_dssp CCCC--CCCCCCCCCEEEEEEEECCSSCCEEEEEET
T ss_pred CCEE--EccCCccCccEEEEEEEeeeCCCeEEEEEC
Confidence 4555 56677778899999998 8886
No 6
>2f41_A Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis} SCOP: d.38.1.5
Probab=10.72 E-value=4.5e+02 Score=18.54 Aligned_cols=21 Identities=10% Similarity=0.139 Sum_probs=16.8
Q ss_pred EEEecCCCC-CcEEEEEEEeec
Q psy9809 194 AVHFKNPKL-NTLINVDCRAWA 214 (237)
Q Consensus 194 AVqf~n~~~-n~~v~VeCk~wA 214 (237)
-++|.+|.+ |..+.+++++-.
T Consensus 66 ~i~F~~Pv~~Gd~l~~~a~v~~ 87 (121)
T 2f41_A 66 DIRFTRQVKQGERVVAKAKVTA 87 (121)
T ss_dssp EEEECSCCBTTCEEEEEEEEEE
T ss_pred eEEEeCCcCCCCEEEEEEEEEE
Confidence 478998875 888999998874
No 7
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=9.83 E-value=2.2e+02 Score=21.90 Aligned_cols=47 Identities=23% Similarity=0.265 Sum_probs=24.9
Q ss_pred CCcceEEeCCCC-CCCcc--cccc-CCCCCCCCeEEEE--------ecCCCCCcEEEEE
Q psy9809 163 HIGPVEIYPQHG-TPGYY--YPYE-NKEGYLSPVLAVH--------FKNPKLNTLINVD 209 (237)
Q Consensus 163 ~lg~i~Y~P~~g-fp~~Y--fPy~-n~~~Y~~PlVAVq--------f~n~~~n~~v~Ve 209 (237)
..|.|.|||..| |-..| +|.. +...|-+|++-+= |..++-+..|.||
T Consensus 74 ~~GDIaYw~pgg~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~~~~~V~IE 132 (136)
T 1zx8_A 74 EIGDVGYWPPGKALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIKDGEKVAVR 132 (136)
T ss_dssp CTTEEEEEGGGTEEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCCTTCEEEEE
T ss_pred CCCcEEEeCCCCEEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCCCCceEEEE
Confidence 457899999755 22222 3443 3345666665431 3344445555554
No 8
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=9.71 E-value=2.4e+02 Score=19.47 Aligned_cols=28 Identities=14% Similarity=0.396 Sum_probs=19.6
Q ss_pred CCCCeEEEEecC-CCCCcEEEEEEEeecC
Q psy9809 188 YLSPVLAVHFKN-PKLNTLINVDCRAWAK 215 (237)
Q Consensus 188 Y~~PlVAVqf~n-~~~n~~v~VeCk~wAk 215 (237)
+..|.+-+.=.. +..|..|.+.|.+.+.
T Consensus 6 ~~kP~l~~~p~~~v~~G~~VtL~C~~~~~ 34 (108)
T 4hwn_A 6 FPAPILRAVPSAEPQAGSPMTLSCQTKLP 34 (108)
T ss_dssp CCCCEEEEESCSSCBTTCCEEEEEEC---
T ss_pred CCCCEEEecCCCcCCCCCcEEEEEcccCC
Confidence 456877776544 6789999999998753
No 9
>4a2o_A Eosinophil cationic protein; hydrolase, oxidoreductase, antimicrobial, cytotoxic; HET: SO4; 1.69A {Homo sapiens} PDB: 2kb5_A 1dyt_A* 4a2y_A* 1h1h_A* 1qmt_A
Probab=9.64 E-value=2.9e+02 Score=21.02 Aligned_cols=16 Identities=31% Similarity=0.571 Sum_probs=12.1
Q ss_pred cceeeEeeeecCCCCC
Q psy9809 146 MQTVWVSCDGESPADR 161 (237)
Q Consensus 146 ~~~iwv~C~g~~~~d~ 161 (237)
...|.|.|++..+.|.
T Consensus 104 ~k~iiVaC~~~~~~d~ 119 (133)
T 4a2o_A 104 RRFYVVACDNRDPRDS 119 (133)
T ss_dssp EECEEEEEEECCTTSC
T ss_pred ceeEEEEeCCCCCCCC
Confidence 4479999999876553
No 10
>2fcg_F Cationic, antibacterial protein FALL-39, core peptide; HOST defense peptide, antimicrobial peptide, antimicrobial protein; NMR {Synthetic}
Probab=9.39 E-value=2.6e+02 Score=15.52 Aligned_cols=20 Identities=25% Similarity=0.468 Sum_probs=15.1
Q ss_pred ccHHHHHHHHHHHHHHhhhh
Q psy9809 51 TNVQKWTRKIDDFLERLKNV 70 (237)
Q Consensus 51 ~s~~~yv~~l~~fL~~Y~~~ 70 (237)
...+...++|.+||...-..
T Consensus 3 ~~~kkIgQkIkdFf~~l~pr 22 (26)
T 2fcg_F 3 KEFKRIVQRIKDFLRNLVPR 22 (26)
T ss_dssp CSHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHHHhcCcc
Confidence 34678889999999876543
Done!