BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9810
(154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O88533|DDC_MOUSE Aromatic-L-amino-acid decarboxylase OS=Mus musculus GN=Ddc PE=2
SV=1
Length = 480
Score = 113 bits (283), Expect = 4e-25, Method: Composition-based stats.
Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 14/132 (10%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPLGRRFRSLK+WFV R+ GVK LQ YIRK + L+ EFE LVR D RFE+ EV++G
Sbjct: 348 HWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVELSHEFESLVRQDPRFEICTEVILG 407
Query: 61 LVCFRLKTA----KVGLRKFDYENFLCTLLLPKALQNASFVIR----AFNIEVAKVQ--- 109
LVCFRLK + + L++ + + L+P L++ FV+R A +E A VQ
Sbjct: 408 LVCFRLKGSNELNETLLQRINSAKKI--HLVPCRLRD-KFVLRFAVCARTVESAHVQLAW 464
Query: 110 DNVSDVTTGQAR 121
+++SD+ + R
Sbjct: 465 EHISDLASSVLR 476
>sp|P20711|DDC_HUMAN Aromatic-L-amino-acid decarboxylase OS=Homo sapiens GN=DDC PE=1
SV=2
Length = 480
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 56/70 (80%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPLGRRFRSLK+WFV R+ GVK LQ YIRK + L+ EFE LVR D RFE+ EV++G
Sbjct: 348 HWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILG 407
Query: 61 LVCFRLKTAK 70
LVCFRLK +
Sbjct: 408 LVCFRLKGSN 417
>sp|P14173|DDC_RAT Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus GN=Ddc
PE=1 SV=1
Length = 480
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 56/70 (80%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPLGRRFRSLK+WFV R+ GVK LQ YIRK + L+ EFE LVR D RFE+ EV++G
Sbjct: 348 HWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVKLSHEFESLVRQDPRFEICTEVILG 407
Query: 61 LVCFRLKTAK 70
LVCFRLK +
Sbjct: 408 LVCFRLKGSN 417
>sp|P48861|DDC_MANSE Aromatic-L-amino-acid decarboxylase OS=Manduca sexta GN=Ddc PE=2
SV=1
Length = 508
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 58/70 (82%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPLGRRFRSLKLWFVLRL GV+ LQ+YIRKQI A FE+L+ SD+RFE+ EV MG
Sbjct: 346 HWQIPLGRRFRSLKLWFVLRLYGVENLQKYIRKQIGFAHLFERLLTSDERFELFEEVTMG 405
Query: 61 LVCFRLKTAK 70
LVCFRLK +
Sbjct: 406 LVCFRLKGSN 415
>sp|P22781|DDC_CAVPO Aromatic-L-amino-acid decarboxylase OS=Cavia porcellus GN=DDC PE=2
SV=1
Length = 480
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 55/70 (78%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPLGRRFRSLK+WFV R+ G+K LQ +IRK + LA EFE LVR D RFE+ EV +G
Sbjct: 348 HWQIPLGRRFRSLKMWFVFRMYGIKGLQAHIRKHVQLAHEFESLVRQDPRFEICMEVTLG 407
Query: 61 LVCFRLKTAK 70
LVCFRLK +
Sbjct: 408 LVCFRLKGSN 417
>sp|P27718|DDC_BOVIN Aromatic-L-amino-acid decarboxylase OS=Bos taurus GN=DDC PE=2 SV=2
Length = 487
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 15/119 (12%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQ+PLGRRFRSLK+WFV R+ GVK LQ YIRK + L+ FE LVR D RFE+ EV++G
Sbjct: 348 HWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHAFEALVRQDTRFEICAEVILG 407
Query: 61 LVCFRLKTAKVGLRKFDYENFLCTL-------LLPKALQNA---SFVIRAFNIEVAKVQ 109
LVCFRLK G K + E L ++ L+P +L++ F I + +E+A VQ
Sbjct: 408 LVCFRLK----GSNKLN-EALLESINSAKKIHLVPCSLRDRFVLRFAICSRTVELAHVQ 461
>sp|P80041|DDC_PIG Aromatic-L-amino-acid decarboxylase OS=Sus scrofa GN=DDC PE=1 SV=2
Length = 486
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 53/69 (76%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQ+PLGRRFRSLK+WFV R+ GVK LQ YIRK + L+ EFE V D RFEV EV +G
Sbjct: 348 HWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLG 407
Query: 61 LVCFRLKTA 69
LVCFRLK +
Sbjct: 408 LVCFRLKGS 416
>sp|O96567|DDC_DROSI Aromatic-L-amino-acid decarboxylase OS=Drosophila simulans GN=Ddc
PE=3 SV=2
Length = 510
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPLGRRFR+LKLWFVLRL GV+ LQ +IR+ + AK+F L +D RFE+ E+ MG
Sbjct: 380 HWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMG 439
Query: 61 LVCFRLK 67
LVCFRLK
Sbjct: 440 LVCFRLK 446
>sp|P05031|DDC_DROME Aromatic-L-amino-acid decarboxylase OS=Drosophila melanogaster
GN=Ddc PE=1 SV=4
Length = 510
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPLGRRFR+LKLWFVLRL GV+ LQ +IR+ + AK+F L +D RFE+ E+ MG
Sbjct: 380 HWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMG 439
Query: 61 LVCFRLK 67
LVCFRLK
Sbjct: 440 LVCFRLK 446
>sp|Q7XHL3|TYDC1_ORYSJ Tyrosine decarboxylase 1 OS=Oryza sativa subsp. japonica
GN=Os07g0437500 PE=2 SV=1
Length = 497
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 64/106 (60%), Gaps = 8/106 (7%)
Query: 2 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 61
WQIPLGRRFRSLKLW VLRL GV LQ YIRK I LA+ FEQL+ SD RFEV+ L
Sbjct: 360 WQIPLGRRFRSLKLWMVLRLYGVDNLQSYIRKHIHLAEHFEQLLLSDSRFEVVTPRTFSL 419
Query: 62 VCFRL---KTAKVGLRKFDYE-----NFLCTLLLPKALQNASFVIR 99
VCFRL + RK +Y+ N + L + + FV+R
Sbjct: 420 VCFRLVPPTSDHENGRKLNYDMMDGVNSSGKIFLSHTVLSGKFVLR 465
>sp|O96571|DDC_DROLE Aromatic-L-amino-acid decarboxylase (Fragment) OS=Drosophila
lebanonensis GN=Ddc PE=3 SV=1
Length = 403
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 54/70 (77%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIP+GRRFR+LKLWFVLRL GV+ LQ +IR+ + A++F +L D RFE+ EV MG
Sbjct: 272 HWQIPIGRRFRALKLWFVLRLYGVENLQAHIRRHCTYAQQFAELCVQDSRFELAAEVNMG 331
Query: 61 LVCFRLKTAK 70
LVCFRLK +
Sbjct: 332 LVCFRLKGSN 341
>sp|Q8RY79|TYDC1_ARATH Tyrosine decarboxylase 1 OS=Arabidopsis thaliana GN=ELI5 PE=2 SV=1
Length = 490
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 53/79 (67%)
Query: 2 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 61
WQIPLGRRFRSLKLW VLRL G + L+ YIR I LAKEFEQLV D FE++ + L
Sbjct: 355 WQIPLGRRFRSLKLWMVLRLYGSETLKSYIRNHIKLAKEFEQLVSQDPNFEIVTPRIFAL 414
Query: 62 VCFRLKTAKVGLRKFDYEN 80
VCFRL K +K + N
Sbjct: 415 VCFRLVPVKDEEKKCNNRN 433
>sp|P18486|L2AM_DROME Alpha-methyldopa hypersensitive protein OS=Drosophila melanogaster
GN=amd PE=2 SV=2
Length = 510
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPLGRRFR+LK+W R LG + L+ ++RK I LAK+FEQLV D RFE++ +G
Sbjct: 348 HWQIPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSRFELVAPRALG 407
Query: 61 LVCFRLK 67
LVCFR K
Sbjct: 408 LVCFRPK 414
>sp|P16453|DCHS_RAT Histidine decarboxylase OS=Rattus norvegicus GN=Hdc PE=2 SV=2
Length = 656
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/67 (62%), Positives = 49/67 (73%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPL RRFRS+KLWFV+R GVK LQ ++R +AK FE LVRSD FE+ E +G
Sbjct: 351 HWQIPLSRRFRSIKLWFVIRSFGVKNLQAHVRHGTDMAKYFESLVRSDPVFEIPAERHLG 410
Query: 61 LVCFRLK 67
LV FRLK
Sbjct: 411 LVVFRLK 417
>sp|P23738|DCHS_MOUSE Histidine decarboxylase OS=Mus musculus GN=Hdc PE=1 SV=2
Length = 662
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/67 (61%), Positives = 49/67 (73%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPL RRFRS+KLWFV+R GVK LQ ++R +AK FE LVRSD FE+ + +G
Sbjct: 355 HWQIPLSRRFRSIKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRSDPSFEIPAKRHLG 414
Query: 61 LVCFRLK 67
LV FRLK
Sbjct: 415 LVVFRLK 421
>sp|Q05733|DCHS_DROME Histidine decarboxylase OS=Drosophila melanogaster GN=Hdc PE=2 SV=2
Length = 847
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 27/157 (17%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPL RRFR+LK+WFVLR G+K LQ +IR+ + LA++FE LV +D RFE+ + +G
Sbjct: 347 HWQIPLSRRFRALKVWFVLRSYGIKGLQRHIREGVRLAQKFEALVLADHRFELPAKRHLG 406
Query: 61 LVCFRLK-----TAKVGLRKFDYE-NFLCTLLLPKALQNASFVIRAFNIEVAKVQDNVSD 114
LV FR++ T K+ L++ ++ N C +P +L+ +VIR
Sbjct: 407 LVVFRIRGDNEITEKL-LKRLNHRGNLHC---IPSSLK-GQYVIR--------------- 446
Query: 115 VTTGQARLTFWDNAIDKLYTDQVPAHPVVQELNKVIS 151
T T D D + QV A V++E+N IS
Sbjct: 447 FTITSTHTTLDDIVKDWMEIRQV-ASTVLEEMNITIS 482
>sp|O96569|L2AM_DROLE Alpha-methyldopa hypersensitive protein (Fragment) OS=Drosophila
lebanonensis GN=amd PE=3 SV=1
Length = 439
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPLGRRFR+LK+W R LG + L+ ++RK I LAK+FE V +D RFE++ +G
Sbjct: 277 HWQIPLGRRFRALKVWITFRTLGAEGLRAHVRKHIELAKKFEVFVLADARFELVAPRALG 336
Query: 61 LVCFRLK 67
LVCFR K
Sbjct: 337 LVCFRAK 343
>sp|P19113|DCHS_HUMAN Histidine decarboxylase OS=Homo sapiens GN=HDC PE=1 SV=2
Length = 662
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 49/67 (73%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPL RRFRS+KLWFV+R GVK LQ ++R +AK FE LVR+D FE+ + +G
Sbjct: 348 HWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLG 407
Query: 61 LVCFRLK 67
LV FRLK
Sbjct: 408 LVVFRLK 414
>sp|A7YVD7|NDUF6_BOVIN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos
taurus GN=NDUFAF6 PE=2 SV=1
Length = 333
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%)
Query: 73 LRKFDYENFLCTLLLPKALQNASFVIRAFNIEVAKVQDNVSDVTTGQARLTFWDNAIDKL 132
LRK DYE +LC+LLLP ++++F +RAFN+E+A+++D+VS+ T G R+ FW +D +
Sbjct: 65 LRKRDYEGYLCSLLLPAESRSSAFALRAFNVELAQIKDSVSEKTIGLMRMQFWKKTVDDI 124
Query: 133 YTDQVPAHPVVQELNKVI 150
Y+D P PV EL K +
Sbjct: 125 YSDNPPHQPVAIELWKAV 142
>sp|Q5EA83|DCHS_BOVIN Histidine decarboxylase OS=Bos taurus GN=HDC PE=2 SV=1
Length = 658
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 49/67 (73%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPL RRFRS+KLWFV+R GVK LQ ++R +AK FE LVR+D FE+ + +G
Sbjct: 348 HWQIPLSRRFRSIKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPFFEIPAKRHLG 407
Query: 61 LVCFRLK 67
LV FRLK
Sbjct: 408 LVVFRLK 414
>sp|Q06086|TYDC2_PETCR Tyrosine decarboxylase 2 OS=Petroselinum crispum GN=TYRDC-2 PE=2
SV=1
Length = 514
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 2 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 61
WQI L RRFR+LKLWFVLR GV L+E+IR + +AK FE LV D RFEV+ L +
Sbjct: 363 WQIMLSRRFRALKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVNMDKRFEVVAPRLFSM 422
Query: 62 VCFRLK-TAKVGLRKFDYEN 80
VCFR+K +A +G D N
Sbjct: 423 VCFRIKPSAMIGKNDEDEVN 442
>sp|Q06085|TYDC1_PETCR Tyrosine decarboxylase 1 (Fragment) OS=Petroselinum crispum
GN=TYRDC-1 PE=2 SV=1
Length = 432
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 2 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 61
WQI L RRFR+LKLWFVLR GV L+E+IR + +AK FE LV D+RFEV+ L +
Sbjct: 340 WQIMLSRRFRALKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVGMDNRFEVVAPRLFSM 399
Query: 62 VCFRLK-TAKVGLRKFDYEN 80
VCFR+K +A +G D N
Sbjct: 400 VCFRIKPSAMIGKNDEDEVN 419
>sp|A2AIL4|NDUF6_MOUSE NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus
musculus GN=Ndufaf6 PE=1 SV=1
Length = 333
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 73 LRKFDYENFLCTLLLPKALQNASFVIRAFNIEVAKVQDNVSDVTTGQARLTFWDNAIDKL 132
LRK DYE++LC+LL P Q ++ +RAFN+E+A+V+D+VS+ T G R+ FW A++ +
Sbjct: 65 LRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWKKAVEDM 124
Query: 133 YTDQVPAHPVVQELNKVI 150
Y D P PV EL K +
Sbjct: 125 YCDNPPHQPVAIELWKAV 142
>sp|P81893|L2AM_DROSI Alpha-methyldopa hypersensitive protein (Fragment) OS=Drosophila
simulans GN=amd PE=2 SV=1
Length = 328
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 46/62 (74%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
HWQIPLGRRFR+LK+W R LG + L+ ++RK I LAK+FEQLV D RFE++ +G
Sbjct: 267 HWQIPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSRFELVAPSALG 326
Query: 61 LV 62
LV
Sbjct: 327 LV 328
>sp|Q06088|TYDC4_PETCR Tyrosine decarboxylase 4 OS=Petroselinum crispum GN=TYRDC-4 PE=2
SV=1
Length = 508
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 2 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 61
WQI L RRFR+LKLWFVLR GV L+E+IR + +AK FE LV D RFEV+ L +
Sbjct: 364 WQIMLSRRFRALKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVGLDKRFEVVAPRLFSM 423
Query: 62 VCFRLK-TAKVGLRKFDYEN 80
VCFR+K +A +G D N
Sbjct: 424 VCFRIKPSAMIGKNDEDEVN 443
>sp|Q330K2|NDUF6_HUMAN NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
OS=Homo sapiens GN=NDUFAF6 PE=1 SV=2
Length = 333
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 73 LRKFDYENFLCTLLLPKALQNASFVIRAFNIEVAKVQDNVSDVTTGQARLTFWDNAIDKL 132
LRK DYE +LC+LLLP +++ F +RAFN+E+A+V+D+VS+ T G R+ FW ++ +
Sbjct: 65 LRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKKTVEDI 124
Query: 133 YTDQVPAHPVVQELNKVI 150
Y D P PV EL K +
Sbjct: 125 YCDNPPHQPVAIELWKAV 142
>sp|D3ZN43|NDUF6_RAT NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
OS=Rattus norvegicus GN=Ndufaf6 PE=3 SV=1
Length = 333
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 73 LRKFDYENFLCTLLLPKALQNASFVIRAFNIEVAKVQDNVSDVTTGQARLTFWDNAIDKL 132
LRK DYE++LC+LL P Q ++ +RAFN+E+A+V+D+VS+ T G R+ FW A++ +
Sbjct: 65 LRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWRKAVEDM 124
Query: 133 YTDQVPAHPVVQELNKVI 150
+ D P PV EL K +
Sbjct: 125 FCDNPPHQPVAMELWKAV 142
>sp|Q06087|TYDC3_PETCR Tyrosine decarboxylase 3 OS=Petroselinum crispum GN=TYRDC-3 PE=2
SV=1
Length = 516
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 2 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 61
WQI L RRFR+LKLWFVLR GV L+E+IR + +AK FE LV D RFEV+ L +
Sbjct: 365 WQIMLSRRFRALKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVGLDKRFEVVAPRLFSM 424
Query: 62 VCFRLK-TAKVG 72
VCFR+K +A +G
Sbjct: 425 VCFRIKPSAMIG 436
>sp|P17770|DDC_CATRO Aromatic-L-amino-acid decarboxylase OS=Catharanthus roseus GN=TDC
PE=2 SV=1
Length = 500
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 1 HWQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMG 60
+WQI GR+FRSLKLW +LR GV LQ +IR +++ K FE+ VRSD RFE++
Sbjct: 364 NWQIATGRKFRSLKLWLILRSYGVVNLQSHIRSDVAMGKMFEEWVRSDSRFEIVVPRNFS 423
Query: 61 LVCFRLK 67
LVCFRLK
Sbjct: 424 LVCFRLK 430
>sp|P54771|TYDC5_PAPSO Tyrosine/DOPA decarboxylase 5 OS=Papaver somniferum GN=TYDC5 PE=2
SV=1
Length = 523
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 2 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 61
WQI L RRFRS+KLW VLR GV L+ ++R + +AK F+ L+ D RFE++ +
Sbjct: 367 WQIALSRRFRSMKLWLVLRSYGVANLRSFLRSHVKMAKHFDGLIAMDKRFEIVVPNTFAM 426
Query: 62 VCFRLKTA-----KVGLRKFDY 78
VCFRLK A K+G DY
Sbjct: 427 VCFRLKPAAIFNGKLGENGVDY 448
>sp|P54768|TYDC1_PAPSO Tyrosine/DOPA decarboxylase 1 OS=Papaver somniferum GN=TYDC1 PE=2
SV=1
Length = 518
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 2 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 61
WQI L RRFRS+KLW VLR G+ L+ ++R + +AK F+ L+ D+RFE++ +
Sbjct: 367 WQIALSRRFRSMKLWLVLRSYGIANLRTFLRSHVKMAKHFQGLIGMDNRFEIVVPRTFAM 426
Query: 62 VCFRLKTAKVGLRK 75
VCFRLK A + +K
Sbjct: 427 VCFRLKPAAIFRKK 440
>sp|Q9M0G4|TYDC2_ARATH Probable tyrosine decarboxylase 2 OS=Arabidopsis thaliana
GN=At4g28680 PE=2 SV=1
Length = 545
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 2 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 61
WQI L RRFRSLKLW VLRL G + L+ +IR ++LAK FE V D FEV+ L
Sbjct: 407 WQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSL 466
Query: 62 VCFRL 66
VCFRL
Sbjct: 467 VCFRL 471
>sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2 OS=Papaver somniferum GN=TYDC2 PE=2
SV=1
Length = 531
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 2 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 61
WQI L RRFRSLKLW VLR GV L+ ++R + +AK FE L+ D RFE+ +
Sbjct: 365 WQIALSRRFRSLKLWMVLRSYGVTNLRNFLRSHVKMAKTFEGLICMDGRFEITVPRTFAM 424
Query: 62 VCFRL---KTAKV 71
VCFRL KT KV
Sbjct: 425 VCFRLLPPKTIKV 437
>sp|P54770|TYDC3_PAPSO Tyrosine/DOPA decarboxylase 3 OS=Papaver somniferum GN=TYDC3 PE=2
SV=2
Length = 533
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 2 WQIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGL 61
WQI L RRFRS+KLW VLR GV L+ ++R + +AK FE LV +D RFE+ +
Sbjct: 365 WQIALIRRFRSMKLWMVLRSYGVTNLRNFLRSHVRMAKTFEGLVGADRRFEITVPRTFAM 424
Query: 62 VCFRL 66
VCFRL
Sbjct: 425 VCFRL 429
>sp|Q9VYS5|NDUF6_DROME NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
homolog OS=Drosophila melanogaster GN=CG15738 PE=2 SV=1
Length = 334
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 75 KFDYENFLCTLLLPKALQNASFVIRAFNIEVAK-VQDNVSDVTTGQARLTFWDNAIDKLY 133
K+DYEN+LCTLLLP+ L+ A+F +RAFN+EV++ V + + + RL FW ++IDK +
Sbjct: 62 KYDYENYLCTLLLPRELRRAAFALRAFNVEVSRSVSGHQIEPQIAKMRLKFWHDSIDKCF 121
Query: 134 TDQ-----VPAHPVVQELNKVIS 151
V PV++EL +
Sbjct: 122 EPDSQRSYVEDQPVLRELKHTVG 144
>sp|P34751|DDC_CAEEL Probable aromatic-L-amino-acid decarboxylase OS=Caenorhabditis
elegans GN=hdl-1 PE=2 SV=3
Length = 905
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 63
+P +R +LK+WF++R GV+ LQ IR+ I L + ++++ D RFEV +V+MGL+C
Sbjct: 683 LPTSQRVGALKIWFMIRSFGVENLQNQIREHIRLGQVMTKILQKDLRFEVCNKVVMGLIC 742
Query: 64 FRLKTAKVGLRKFDYE-NFLCTLLLPKALQNASFVIR 99
FR K+ + + Y N + L + FVIR
Sbjct: 743 FRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIR 779
>sp|Q54E48|NDUF6_DICDI NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
homolog OS=Dictyostelium discoideum GN=DDB_G0291852 PE=3
SV=1
Length = 356
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 73 LRKFDYENFLCTLLLPKAL-QNASFVIRAFNIEVAKVQDNVSDVTTGQARLTFWDNAIDK 131
++ D EN++ +LL+ + + ++ IRAFNIE + + RL+FW +AI+
Sbjct: 85 IKTCDKENYINSLLISDPIARRVAYAIRAFNIETVANDHSPKSEKISRLRLSFWKDAINN 144
Query: 132 LYTDQVPAHPVVQELNKVI 150
+Y +V P+ + L +VI
Sbjct: 145 IYNGKVYDQPLTRVLAQVI 163
>sp|P71362|DDC_HAEIN L-2,4-diaminobutyrate decarboxylase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ddc PE=1
SV=1
Length = 511
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 26/135 (19%)
Query: 8 RRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL- 66
RRF +LKLWF L LG I + L KE EQ + E++ V FR+
Sbjct: 371 RRFDALKLWFTLEALGEDLYASMIDHGVKLTKEVEQYINDTPDLEMLVPSQFASVLFRVV 430
Query: 67 -----------------------KTAKVGLRKF-DYENFLCTLLLPKA-LQNASFVIRAF 101
A +G+ K D ++ T L P A L+N ++
Sbjct: 431 PKDYPAEFIDALNQNVADELFARGEANIGVTKVGDKQSLKMTTLSPIATLENVKALLTQV 490
Query: 102 NIEVAKVQDNVSDVT 116
E +++D++ + T
Sbjct: 491 LTEANRIKDDIKNGT 505
>sp|Q28D99|GADL1_XENTR Glutamate decarboxylase-like protein 1 (Fragment) OS=Xenopus
tropicalis GN=gadl1 PE=2 SV=2
Length = 511
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 3 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 62
I RR + K W + + LG L+E I + ++L + ++ D FE+++E
Sbjct: 371 SIQCSRRADAFKFWMMWKALGTTGLEERINRALALTRYLASEIKKRDGFELLWEPEYANT 430
Query: 63 CF 64
CF
Sbjct: 431 CF 432
>sp|Q43908|DDC_ACIBA L-2,4-diaminobutyrate decarboxylase OS=Acinetobacter baumannii
GN=ddc PE=1 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 0.11, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 8 RRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVCFRL 66
RRF +LKLW + LG + I + L +E +++ + E++ E V FR+
Sbjct: 370 RRFDALKLWMTIESLGEELYGSMIDHGVKLTREVADYIKATEGLELLVEPQFASVLFRV 428
>sp|A1USC8|RPOB_BARBK DNA-directed RNA polymerase subunit beta OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=rpoB PE=3 SV=1
Length = 1383
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 7 GRRFRSLKLWFVLRLLGVKY-LQEYIR-KQISLA---KEFEQLVRSDDRFEVIYEVLMGL 61
G+RF +++W L G Y LQE + K +A K +E +VR DD FE +
Sbjct: 1293 GQRFGEMEVW-ALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEASIPESFNV 1351
Query: 62 VCFRLKTAKVGLRKFDYENFLCTLLLPKALQN 93
+ +++ + ++ D F+ LP+ ++N
Sbjct: 1352 LIKEMRSLGLNVKLGDAREFMAQQALPEVVEN 1383
>sp|Q9DBE0|CSAD_MOUSE Cysteine sulfinic acid decarboxylase OS=Mus musculus GN=Csad PE=2
SV=1
Length = 493
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 4 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 63
+ GRR LKLW + + G + L+ I + +L + + ++ + FE++ E VC
Sbjct: 354 VQCGRRVDCLKLWLMWKAQGGQGLERRIDQAFALTRYLVEEIKKREGFELVMEPEFVNVC 413
Query: 64 F 64
F
Sbjct: 414 F 414
>sp|Q8H8K7|FH4_ORYSJ Formin-like protein 4 OS=Oryza sativa subsp. japonica GN=FH4 PE=3
SV=1
Length = 849
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 41 FEQLVRSDDRFEVIYEVLMGLVCFRLKT-AKVGLRKFDYENFLCTLLLPKALQNASFVIR 99
+++L +D EV++ V R+ KVG+ +F E +L PK QN + ++R
Sbjct: 434 WDRLKLDEDMIEVLFMNNSTAVAPRMDNPKKVGMPQFKQEE---RVLDPKKAQNIAILLR 490
Query: 100 AFNIEVAKVQDNVSD 114
A N+ + +V D + D
Sbjct: 491 ALNVTLEEVTDALLD 505
>sp|Q9Y600|CSAD_HUMAN Cysteine sulfinic acid decarboxylase OS=Homo sapiens GN=CSAD PE=1
SV=2
Length = 493
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 4 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 63
+ GRR LKLW + + G + L+ I + LA+ + ++ + FE++ E VC
Sbjct: 354 VQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVC 413
Query: 64 F 64
F
Sbjct: 414 F 414
>sp|Q8D894|MOAA_VIBVU Cyclic pyranopterin monophosphate synthase OS=Vibrio vulnificus
(strain CMCP6) GN=moaA PE=3 SV=2
Length = 334
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 77 DYENFLCTLLLPKALQ-----NASFVIRAFNIEVAKVQDNVSDVTTGQARLTFWDNAIDK 131
D NF CT LP Q N+SF+ + E+ +V +D T + R+T + ++ K
Sbjct: 27 DVCNFKCTYCLPDGYQPSGQKNSSFLNLS---EIRRVVKAFADCGTSKVRITGGEPSLRK 83
Query: 132 LYTDQVPAHPVVQELNKVISIV 153
+TD + Q + +V +
Sbjct: 84 DFTDIIHTVASTQGIKRVATTT 105
>sp|Q7MM75|MOAA_VIBVY Cyclic pyranopterin monophosphate synthase OS=Vibrio vulnificus
(strain YJ016) GN=moaA PE=3 SV=2
Length = 334
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 77 DYENFLCTLLLPKALQ-----NASFVIRAFNIEVAKVQDNVSDVTTGQARLTFWDNAIDK 131
D NF CT LP Q N+SF+ + E+ +V +D T + R+T + ++ K
Sbjct: 27 DVCNFKCTYCLPDGYQPSGQKNSSFLNLS---EIRRVVKAFADCGTSKVRITGGEPSLRK 83
Query: 132 LYTDQVPAHPVVQELNKVISIV 153
+TD + Q + +V +
Sbjct: 84 DFTDIIHTVASTQGIKRVATTT 105
>sp|Q64611|CSAD_RAT Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus GN=Csad
PE=1 SV=1
Length = 493
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 4 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 63
+ GRR LKLW + + G + L+ I + +L + + ++ + FE++ E VC
Sbjct: 354 VQCGRRVDCLKLWLMWKAQGGQGLEWRIDQAFALTRYLVEEIKKREGFELVMEPEFVNVC 413
Query: 64 F 64
F
Sbjct: 414 F 414
>sp|A6QM00|GADL1_BOVIN Glutamate decarboxylase-like protein 1 OS=Bos taurus GN=GADL1 PE=2
SV=2
Length = 521
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 3 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 62
I RR + K W + LG L+E + + ++L++ + ++ + F+++ E +
Sbjct: 381 SIQCSRRPDAFKFWLAWKALGTLGLEERVNRALALSRYLVEEIKKREGFKLLMEPEYANI 440
Query: 63 CF 64
CF
Sbjct: 441 CF 442
>sp|Q80WP8|GADL1_MOUSE Glutamate decarboxylase-like protein 1 OS=Mus musculus GN=Gadl1
PE=2 SV=3
Length = 550
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 4 IPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLVC 63
I RR + K W + LG L+E + + +L++ ++ + F+++ E VC
Sbjct: 411 IQCSRRPDAFKFWMTWKALGTSGLEERVNRAFALSRYLVDEIKKREGFKLLMEPEYTNVC 470
Query: 64 F 64
F
Sbjct: 471 F 471
>sp|Q6ZQY3|GADL1_HUMAN Glutamate decarboxylase-like protein 1 OS=Homo sapiens GN=GADL1
PE=2 SV=4
Length = 521
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 30/62 (48%)
Query: 3 QIPLGRRFRSLKLWFVLRLLGVKYLQEYIRKQISLAKEFEQLVRSDDRFEVIYEVLMGLV 62
I RR + K W + LG L+E + + ++L++ ++ + F+++ E +
Sbjct: 381 SIQCSRRPDAFKFWMTWKALGTLGLEERVNRALALSRYLVDEIKKREGFKLLMEPEYANI 440
Query: 63 CF 64
CF
Sbjct: 441 CF 442
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,545,761
Number of Sequences: 539616
Number of extensions: 1772577
Number of successful extensions: 5878
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5819
Number of HSP's gapped (non-prelim): 66
length of query: 154
length of database: 191,569,459
effective HSP length: 107
effective length of query: 47
effective length of database: 133,830,547
effective search space: 6290035709
effective search space used: 6290035709
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)