BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9815
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O96571|DDC_DROLE Aromatic-L-amino-acid decarboxylase (Fragment) OS=Drosophila
lebanonensis GN=Ddc PE=3 SV=1
Length = 403
Score = 103 bits (258), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 2 HPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDL 61
HPDW D II+ LVGY S QAHSSVERAGLLGGV +R +PAD+ +LRG+ALE AIE+DL
Sbjct: 97 HPDWDDHTIISKLVGYSSAQAHSSVERAGLLGGVKLRSVPADEQNRLRGEALEKAIEQDL 156
Query: 62 KKGKIPFY 69
G IPFY
Sbjct: 157 ADGLIPFY 164
>sp|P48861|DDC_MANSE Aromatic-L-amino-acid decarboxylase OS=Manduca sexta GN=Ddc PE=2
SV=1
Length = 508
Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/69 (62%), Positives = 53/69 (76%)
Query: 2 HPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDL 61
HP+W ++DI+ LVGYC+ QAHSSVERAGLLGGV +R L D +LRGD L AI+ED+
Sbjct: 171 HPEWTETDILGKLVGYCNQQAHSSVERAGLLGGVKLRSLKPDSKRRLRGDTLREAIDEDI 230
Query: 62 KKGKIPFYV 70
+ G IPFYV
Sbjct: 231 RNGLIPFYV 239
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 64 GKIPFYVNQ-AHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPF 119
GK+ Y NQ AHSSVERAGLLGGV +R L D +LRGD L AI+ED++ G IPF
Sbjct: 181 GKLVGYCNQQAHSSVERAGLLGGVKLRSLKPDSKRRLRGDTLREAIDEDIRNGLIPF 237
>sp|O96567|DDC_DROSI Aromatic-L-amino-acid decarboxylase OS=Drosophila simulans GN=Ddc
PE=3 SV=2
Length = 510
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/68 (61%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 2 HPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDL 61
HP+W + I+ LVGYCSDQAHSSVERAGLLGGV +R + +++ +++RG ALE AIE+DL
Sbjct: 206 HPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSEN-HRMRGAALEKAIEQDL 264
Query: 62 KKGKIPFY 69
+G IPFY
Sbjct: 265 AEGLIPFY 272
>sp|P05031|DDC_DROME Aromatic-L-amino-acid decarboxylase OS=Drosophila melanogaster
GN=Ddc PE=1 SV=4
Length = 510
Score = 93.2 bits (230), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/68 (60%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 2 HPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDL 61
HP+W + I+ LVGYCSDQAHSSVERAGLLGGV +R + +++ +++RG ALE AIE+D+
Sbjct: 206 HPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSEN-HRMRGAALEKAIEQDV 264
Query: 62 KKGKIPFY 69
+G IPFY
Sbjct: 265 AEGLIPFY 272
>sp|Q05733|DCHS_DROME Histidine decarboxylase OS=Drosophila melanogaster GN=Hdc PE=2 SV=2
Length = 847
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/69 (55%), Positives = 52/69 (75%)
Query: 2 HPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDL 61
HP ++D++I A LV YCSDQAHSSVE+A L+G V +R + ADD +RG L AIE+D+
Sbjct: 172 HPGYQDAEINARLVAYCSDQAHSSVEKAALIGLVRMRYIEADDDLAMRGKLLREAIEDDI 231
Query: 62 KKGKIPFYV 70
K+G +PF+V
Sbjct: 232 KQGLVPFWV 240
>sp|P23738|DCHS_MOUSE Histidine decarboxylase OS=Mus musculus GN=Hdc PE=1 SV=2
Length = 662
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 3 PDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLK 62
PD +S + A LV Y SDQAHSSVE+AGL+ V IR LP DD++ LRG+AL+ AIEED +
Sbjct: 181 PDANESSLNARLVAYTSDQAHSSVEKAGLISLVKIRFLPVDDNFSLRGEALQKAIEEDKQ 240
Query: 63 KGKIPFYV 70
+G +P +V
Sbjct: 241 QGLVPVFV 248
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 56 AIEEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKG 115
A E L + + +QAHSSVE+AGL+ V IR LP DD++ LRG+AL+ AIEED ++G
Sbjct: 183 ANESSLNARLVAYTSDQAHSSVEKAGLISLVKIRFLPVDDNFSLRGEALQKAIEEDKQQG 242
Query: 116 KIP 118
+P
Sbjct: 243 LVP 245
>sp|P16453|DCHS_RAT Histidine decarboxylase OS=Rattus norvegicus GN=Hdc PE=2 SV=2
Length = 656
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 1 AH-PDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 59
AH P+ +S + A LV Y SDQAHSSVE+AGL+ V I+ LP DD++ LRG+AL+ AIEE
Sbjct: 174 AHEPNADESSLNARLVAYASDQAHSSVEKAGLISLVKIKFLPVDDNFSLRGEALQKAIEE 233
Query: 60 DLKKGKIPFYV 70
D ++G +P +V
Sbjct: 234 DKQQGLVPVFV 244
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 56 AIEEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKG 115
A E L + + +QAHSSVE+AGL+ V I+ LP DD++ LRG+AL+ AIEED ++G
Sbjct: 179 ADESSLNARLVAYASDQAHSSVEKAGLISLVKIKFLPVDDNFSLRGEALQKAIEEDKQQG 238
Query: 116 KIP 118
+P
Sbjct: 239 LVP 241
>sp|P19113|DCHS_HUMAN Histidine decarboxylase OS=Homo sapiens GN=HDC PE=1 SV=2
Length = 662
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 1 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 60
+ PD +S + A LV Y SDQAHSSVE+AGL+ V ++ LP DD++ LRG+AL+ AIEED
Sbjct: 172 SEPDADESCLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEED 231
Query: 61 LKKGKIPFYV 70
++G +P +V
Sbjct: 232 KQRGLVPVFV 241
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 51 DALEAAIEEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 110
DA E+ + L + + +QAHSSVE+AGL+ V ++ LP DD++ LRG+AL+ AIEE
Sbjct: 175 DADESCLNARL----VAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEE 230
Query: 111 DLKKGKIP 118
D ++G +P
Sbjct: 231 DKQRGLVP 238
>sp|P14173|DDC_RAT Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus GN=Ddc
PE=1 SV=1
Length = 480
Score = 80.1 bits (196), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 48/70 (68%)
Query: 1 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 60
A P+ + ++ LV Y SDQAHSSVERAGL+GGV I+ +P+D +Y +R AL A+E D
Sbjct: 170 ASPELTQAALMEKLVAYTSDQAHSSVERAGLIGGVKIKAIPSDGNYSMRAAALREALERD 229
Query: 61 LKKGKIPFYV 70
G IPF+V
Sbjct: 230 KAAGLIPFFV 239
Score = 65.9 bits (159), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 54 EAAIEEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLK 113
+AA+ E L + + +QAHSSVERAGL+GGV I+ +P+D +Y +R AL A+E D
Sbjct: 176 QAALMEKL----VAYTSDQAHSSVERAGLIGGVKIKAIPSDGNYSMRAAALREALERDKA 231
Query: 114 KGKIPF 119
G IPF
Sbjct: 232 AGLIPF 237
>sp|O88533|DDC_MOUSE Aromatic-L-amino-acid decarboxylase OS=Mus musculus GN=Ddc PE=2
SV=1
Length = 480
Score = 79.7 bits (195), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 49/70 (70%)
Query: 1 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 60
A P++ + I+ LV Y SDQAHSSVERAGL+GG+ ++ +P+D ++ +R AL A+E D
Sbjct: 170 ASPEFTQAAIMEKLVAYTSDQAHSSVERAGLIGGIKLKAVPSDGNFSMRASALREALERD 229
Query: 61 LKKGKIPFYV 70
G IPF+V
Sbjct: 230 KAAGLIPFFV 239
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 54 EAAIEEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLK 113
+AAI E L + + +QAHSSVERAGL+GG+ ++ +P+D ++ +R AL A+E D
Sbjct: 176 QAAIMEKL----VAYTSDQAHSSVERAGLIGGIKLKAVPSDGNFSMRASALREALERDKA 231
Query: 114 KGKIPF 119
G IPF
Sbjct: 232 AGLIPF 237
>sp|P20711|DDC_HUMAN Aromatic-L-amino-acid decarboxylase OS=Homo sapiens GN=DDC PE=1
SV=2
Length = 480
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 49/70 (70%)
Query: 1 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 60
A P+ + I+ LV Y SDQAHSSVERAGL+GGV ++ +P+D ++ +R AL+ A+E D
Sbjct: 170 ASPELTQAAIMEKLVAYSSDQAHSSVERAGLIGGVKLKAIPSDGNFAMRASALQEALERD 229
Query: 61 LKKGKIPFYV 70
G IPF++
Sbjct: 230 KAAGLIPFFM 239
Score = 65.9 bits (159), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 54 EAAIEEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLK 113
+AAI E L + + +QAHSSVERAGL+GGV ++ +P+D ++ +R AL+ A+E D
Sbjct: 176 QAAIMEKL----VAYSSDQAHSSVERAGLIGGVKLKAIPSDGNFAMRASALQEALERDKA 231
Query: 114 KGKIPF 119
G IPF
Sbjct: 232 AGLIPF 237
>sp|P27718|DDC_BOVIN Aromatic-L-amino-acid decarboxylase OS=Bos taurus GN=DDC PE=2 SV=2
Length = 487
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 48/70 (68%)
Query: 1 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 60
A P+ + I+ LV Y SDQAHSSVE+AGL+GGV ++ +P+D + +R AL+ A+E D
Sbjct: 170 ASPELMQAAIMEKLVAYASDQAHSSVEKAGLIGGVRLKAIPSDGKFAMRASALQEALERD 229
Query: 61 LKKGKIPFYV 70
G IPF+V
Sbjct: 230 KAAGLIPFFV 239
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Query: 51 DALEAAIEEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 110
+ ++AAI E L + + +QAHSSVE+AGL+GGV ++ +P+D + +R AL+ A+E
Sbjct: 173 ELMQAAIMEKL----VAYASDQAHSSVEKAGLIGGVRLKAIPSDGKFAMRASALQEALER 228
Query: 111 DLKKGKIPF 119
D G IPF
Sbjct: 229 DKAAGLIPF 237
>sp|P22781|DDC_CAVPO Aromatic-L-amino-acid decarboxylase OS=Cavia porcellus GN=DDC PE=2
SV=1
Length = 480
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 1 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 60
A P+ + I+ LV Y SDQAHSSVERAGL+GGV ++ +P+D ++ +R AL A+E D
Sbjct: 170 ASPELTQAAIMEKLVAYASDQAHSSVERAGLIGGVRMKLIPSDSNFAMRASALREALERD 229
Query: 61 LKKGKIPFYV 70
G IPF+V
Sbjct: 230 KAAGLIPFFV 239
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 54 EAAIEEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLK 113
+AAI E L + + +QAHSSVERAGL+GGV ++ +P+D ++ +R AL A+E D
Sbjct: 176 QAAIMEKL----VAYASDQAHSSVERAGLIGGVRMKLIPSDSNFAMRASALREALERDKA 231
Query: 114 KGKIPF 119
G IPF
Sbjct: 232 AGLIPF 237
>sp|P80041|DDC_PIG Aromatic-L-amino-acid decarboxylase OS=Sus scrofa GN=DDC PE=1 SV=2
Length = 486
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 1 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 60
A P ++ LV Y SDQAHSSVERAGL+GGV ++ +P+D + +R AL+ A+E D
Sbjct: 170 ASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERD 229
Query: 61 LKKGKIPFYV 70
G IPF+V
Sbjct: 230 KAAGLIPFFV 239
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 66 IPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPF 119
+ + +QAHSSVERAGL+GGV ++ +P+D + +R AL+ A+E D G IPF
Sbjct: 184 VAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPF 237
>sp|Q5EA83|DCHS_BOVIN Histidine decarboxylase OS=Bos taurus GN=HDC PE=2 SV=1
Length = 658
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 52/70 (74%)
Query: 1 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 60
+ P+ +S + A LV Y SDQAHSSVE+AGL+ V ++ LP D+++ LRG+AL+ AI+ED
Sbjct: 172 SEPEADESFLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDENFSLRGEALQKAIKED 231
Query: 61 LKKGKIPFYV 70
++G +P +V
Sbjct: 232 RERGLVPIFV 241
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 40 LPADDSYKLRGDALEAAIEEDLKKGKIPFYV-NQAHSSVERAGLLGGVTIRGLPADDSYK 98
L A + L A E +E ++ Y +QAHSSVE+AGL+ V ++ LP D+++
Sbjct: 159 LAARKNKILEMKASEPEADESFLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDENFS 218
Query: 99 LRGDALEAAIEEDLKKGKIP 118
LRG+AL+ AI+ED ++G +P
Sbjct: 219 LRGEALQKAIKEDRERGLVP 238
>sp|P81893|L2AM_DROSI Alpha-methyldopa hypersensitive protein (Fragment) OS=Drosophila
simulans GN=amd PE=2 SV=1
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 1 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 60
+HP+ +S++ LV Y SDQ++S +E+AG+L + IR LPA + + LRGD L AIEED
Sbjct: 89 SHPELSESEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEED 148
Query: 61 LKKGKIP 67
+ G+IP
Sbjct: 149 VAAGRIP 155
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 58 EEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKI 117
E +++ + + +Q++S +E+AG+L + IR LPA + + LRGD L AIEED+ G+I
Sbjct: 95 ESEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEEDVAAGRI 154
Query: 118 P 118
P
Sbjct: 155 P 155
>sp|P18486|L2AM_DROME Alpha-methyldopa hypersensitive protein OS=Drosophila melanogaster
GN=amd PE=2 SV=2
Length = 510
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 1 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 60
+HP+ +S++ LV Y SDQ++S +E+AG+L + IR LPA + + LRGD L AIEED
Sbjct: 170 SHPELSESEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEED 229
Query: 61 LKKGKIP 67
+ G+IP
Sbjct: 230 VAAGRIP 236
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 58 EEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKI 117
E +++ + + +Q++S +E+AG+L + IR LPA + + LRGD L AIEED+ G+I
Sbjct: 176 ESEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEEDVAAGRI 235
Query: 118 P 118
P
Sbjct: 236 P 236
>sp|O96569|L2AM_DROLE Alpha-methyldopa hypersensitive protein (Fragment) OS=Drosophila
lebanonensis GN=amd PE=3 SV=1
Length = 439
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 1 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 60
+HP+ +SDI LV Y SDQ++S +E+AG+L + I+ LPA + LRG AL +AIE+D
Sbjct: 99 SHPELSESDIRGKLVAYSSDQSNSCIEKAGVLAAMPIKLLPAGEDLILRGAALRSAIEQD 158
Query: 61 LKKGKIP 67
+ G IP
Sbjct: 159 VTAGLIP 165
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 58 EEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKI 117
E D++ + + +Q++S +E+AG+L + I+ LPA + LRG AL +AIE+D+ G I
Sbjct: 105 ESDIRGKLVAYSSDQSNSCIEKAGVLAAMPIKLLPAGEDLILRGAALRSAIEQDVTAGLI 164
Query: 118 P 118
P
Sbjct: 165 P 165
>sp|P34751|DDC_CAEEL Probable aromatic-L-amino-acid decarboxylase OS=Caenorhabditis
elegans GN=hdl-1 PE=2 SV=3
Length = 905
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 6 KDSDIIANLVGYCSDQAHSSVER--AGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKK 63
+ SDI+A LV Y S A S++ A + V +R LP D ++ LRGD L AAI D+++
Sbjct: 518 RSSDILARLVAYTSSDARRSIKMKMAAEVAMVKMRVLPTDQNFILRGDTLHAAIMADIER 577
Query: 64 GKIPFYV 70
G IPF+V
Sbjct: 578 GLIPFFV 584
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 86 VTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPF 119
V +R LP D ++ LRGD L AAI D+++G IPF
Sbjct: 549 VKMRVLPTDQNFILRGDTLHAAIMADIERGLIPF 582
>sp|Q9M0G4|TYDC2_ARATH Probable tyrosine decarboxylase 2 OS=Arabidopsis thaliana
GN=At4g28680 PE=2 SV=1
Length = 545
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 10 IIANLVGYCSDQAHSSVERAGLLGGV---TIRGLPADDS--YKLRGDALEAAIEEDLKKG 64
++ LV Y SDQ HSS +A L+GG+ IR L D S Y + ++LE AI DL KG
Sbjct: 232 LLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKG 291
Query: 65 KIPFYV 70
IPF++
Sbjct: 292 FIPFFI 297
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 71 NQAHSSVERAGLLGGV---TIRGLPADDS--YKLRGDALEAAIEEDLKKGKIPF 119
+Q HSS +A L+GG+ IR L D S Y + ++LE AI DL KG IPF
Sbjct: 242 DQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPF 295
>sp|Q06088|TYDC4_PETCR Tyrosine decarboxylase 4 OS=Petroselinum crispum GN=TYRDC-4 PE=2
SV=1
Length = 508
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 9 DIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPA-----DDSYKLRGDALEAAIEEDLKK 63
D I LV YCSDQ HS++++A + G+ + A ++KL LE+AI DL+
Sbjct: 188 DNIGKLVVYCSDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFKLCPKRLESAILYDLQN 247
Query: 64 GKIPFYV 70
G IP Y+
Sbjct: 248 GLIPLYL 254
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 53 LEAAIEEDLKK------GKIPFYV-NQAHSSVERAGLLGGVTIRGLPA-----DDSYKLR 100
L AA +++L++ GK+ Y +Q HS++++A + G+ + A ++KL
Sbjct: 174 LVAARDKNLRQHGMDNIGKLVVYCSDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFKLC 233
Query: 101 GDALEAAIEEDLKKGKIPF 119
LE+AI DL+ G IP
Sbjct: 234 PKRLESAILYDLQNGLIPL 252
>sp|Q06087|TYDC3_PETCR Tyrosine decarboxylase 3 OS=Petroselinum crispum GN=TYRDC-3 PE=2
SV=1
Length = 516
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 9 DIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPA-----DDSYKLRGDALEAAIEEDLKK 63
D I LV YCSDQ HS++++A + G+ + A ++KL LE+AI DL+
Sbjct: 189 DNIGKLVVYCSDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFKLCPKRLESAILYDLQN 248
Query: 64 GKIPFYV 70
G IP Y+
Sbjct: 249 GLIPLYL 255
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 53 LEAAIEEDLKK------GKIPFYV-NQAHSSVERAGLLGGVTIRGLPA-----DDSYKLR 100
L AA +++L++ GK+ Y +Q HS++++A + G+ + A ++KL
Sbjct: 175 LVAARDKNLRQHGMDNIGKLVVYCSDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFKLC 234
Query: 101 GDALEAAIEEDLKKGKIPF 119
LE+AI DL+ G IP
Sbjct: 235 PKRLESAILYDLQNGLIPL 253
>sp|Q06085|TYDC1_PETCR Tyrosine decarboxylase 1 (Fragment) OS=Petroselinum crispum
GN=TYRDC-1 PE=2 SV=1
Length = 432
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 9 DIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPA-----DDSYKLRGDALEAAIEEDLKK 63
D I LV YCSDQ HS++++A + G+ + A ++KL LE+AI DL+
Sbjct: 164 DNIGKLVVYCSDQTHSALQKAAKIAGIDPKNFRAIETSKSSNFKLCPKRLESAILYDLQN 223
Query: 64 GKIPFYV 70
G IP Y+
Sbjct: 224 GLIPLYL 230
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 53 LEAAIEEDLKK------GKIPFYV-NQAHSSVERAGLLGGVTIRGLPA-----DDSYKLR 100
L AA +++L++ GK+ Y +Q HS++++A + G+ + A ++KL
Sbjct: 150 LVAARDKNLRQHGMDNIGKLVVYCSDQTHSALQKAAKIAGIDPKNFRAIETSKSSNFKLC 209
Query: 101 GDALEAAIEEDLKKGKIPF 119
LE+AI DL+ G IP
Sbjct: 210 PKRLESAILYDLQNGLIPL 228
>sp|Q06086|TYDC2_PETCR Tyrosine decarboxylase 2 OS=Petroselinum crispum GN=TYRDC-2 PE=2
SV=1
Length = 514
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 9 DIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPA-----DDSYKLRGDALEAAIEEDLKK 63
D I LV YCSDQ HS++++A + G+ + A +++L LE+AI DL+
Sbjct: 187 DNIGKLVVYCSDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFQLCPKRLESAILHDLQN 246
Query: 64 GKIPFYV 70
G IP Y+
Sbjct: 247 GLIPLYL 253
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 53 LEAAIEEDLKK------GKIPFYV-NQAHSSVERAGLLGGVTIRGLPA-----DDSYKLR 100
L AA +++L++ GK+ Y +Q HS++++A + G+ + A +++L
Sbjct: 173 LVAARDKNLRQHGMDNIGKLVVYCSDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFQLC 232
Query: 101 GDALEAAIEEDLKKGKIPF 119
LE+AI DL+ G IP
Sbjct: 233 PKRLESAILHDLQNGLIPL 251
>sp|Q8RY79|TYDC1_ARATH Tyrosine decarboxylase 1 OS=Arabidopsis thaliana GN=ELI5 PE=2 SV=1
Length = 490
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 11 IANLVGYCSDQAHSSVERAGLLGGV---TIRGLPADDS--YKLRGDALEAAIEEDLKKGK 65
+ LV Y SDQ HS++++A + G+ R L D S Y LR ++L+ A+ DL+ G
Sbjct: 181 LEKLVVYSSDQTHSALQKACQIAGIHPENCRVLTTDSSTNYALRPESLQEAVSRDLEAGL 240
Query: 66 IPFYV 70
IPF++
Sbjct: 241 IPFFL 245
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 71 NQAHSSVERAGLLGGV---TIRGLPADDS--YKLRGDALEAAIEEDLKKGKIPF 119
+Q HS++++A + G+ R L D S Y LR ++L+ A+ DL+ G IPF
Sbjct: 190 DQTHSALQKACQIAGIHPENCRVLTTDSSTNYALRPESLQEAVSRDLEAGLIPF 243
>sp|Q7XHL3|TYDC1_ORYSJ Tyrosine decarboxylase 1 OS=Oryza sativa subsp. japonica
GN=Os07g0437500 PE=2 SV=1
Length = 497
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 11 IANLVGYCSDQAHSSVERAGLLGGV---TIRGLPAD--DSYKLRGDALEAAIEEDLKKGK 65
+ LV Y SDQ HS++++A + G+ +R + AD +Y + +A+ A+ DL G
Sbjct: 186 LEKLVVYASDQTHSALQKACQIAGIFSENVRVVIADCNKNYAVAPEAVSEALSIDLSSGL 245
Query: 66 IPFYV 70
IPF++
Sbjct: 246 IPFFI 250
>sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2 OS=Papaver somniferum GN=TYDC2 PE=2
SV=1
Length = 531
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 11 IANLVGYCSDQAHSSVERAGLLGGVTIRGLPA-----DDSYKLRGDALEAAIEEDLKKGK 65
I LV Y SDQ H ++++A + G+ + A ++S+ L L I ED++ G
Sbjct: 191 IGRLVVYGSDQTHCALQKAAQVAGINPKNFRAIKTFKENSFGLSAATLREVILEDIEAGL 250
Query: 66 IPFYV 70
IP +V
Sbjct: 251 IPLFV 255
>sp|P54770|TYDC3_PAPSO Tyrosine/DOPA decarboxylase 3 OS=Papaver somniferum GN=TYDC3 PE=2
SV=2
Length = 533
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 11 IANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYK-----LRGDALEAAIEEDLKKGK 65
I LV Y SDQ H ++++A + G+ + A ++K L L I ED++ G
Sbjct: 191 IGRLVVYGSDQTHCALQKAAQIAGINPKNFRAVKTFKANSFGLAASTLREVILEDIEAGL 250
Query: 66 IPFYV 70
IP +V
Sbjct: 251 IPLFV 255
>sp|P20228|DCE_DROME Glutamate decarboxylase OS=Drosophila melanogaster GN=Gad1 PE=2
SV=2
Length = 510
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 3 PDWKDSDIIA---NLVGYCSDQAHSSVERAGLLGGVTIRG---LPADDSYKLRGDALEAA 56
P++K+ + LV + SDQ H S++ + G+ +P+D+ K+ LE
Sbjct: 184 PNYKEHGSVGLPGTLVMFTSDQCHYSIKSCAAVCGLGTDHCIVVPSDEHGKMITSELERL 243
Query: 57 IEEDLKKGKIPFYVN 71
I E KG IPF+VN
Sbjct: 244 ILERKAKGDIPFFVN 258
>sp|Q99259|DCE1_HUMAN Glutamate decarboxylase 1 OS=Homo sapiens GN=GAD1 PE=1 SV=1
Length = 594
Score = 36.2 bits (82), Expect = 0.060, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 11 IANLVGYCSDQAHSSVERAGL---LGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIP 67
+ LV + S+Q+H S+++AG G + + ++ K+ EA I E +KG +P
Sbjct: 279 VPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVP 338
Query: 68 FYVN 71
FYVN
Sbjct: 339 FYVN 342
>sp|Q5IS68|DCE1_PANTR Glutamate decarboxylase 1 OS=Pan troglodytes GN=GAD1 PE=2 SV=1
Length = 594
Score = 36.2 bits (82), Expect = 0.061, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 11 IANLVGYCSDQAHSSVERAGL---LGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIP 67
+ LV + S+Q+H S+++AG G + + ++ K+ EA I E +KG +P
Sbjct: 279 VPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVP 338
Query: 68 FYVN 71
FYVN
Sbjct: 339 FYVN 342
>sp|Q5R7S7|DCE1_PONAB Glutamate decarboxylase 1 OS=Pongo abelii GN=GAD1 PE=2 SV=1
Length = 594
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 11 IANLVGYCSDQAHSSVERAGL---LGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIP 67
+ LV + S+ +H S+++AG G + + ++ K+ EA I E +KG +P
Sbjct: 279 VPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVP 338
Query: 68 FYVN 71
FYVN
Sbjct: 339 FYVN 342
>sp|P54771|TYDC5_PAPSO Tyrosine/DOPA decarboxylase 5 OS=Papaver somniferum GN=TYDC5 PE=2
SV=1
Length = 523
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 11 IANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYK-----LRGDALEAAIEEDLKKGK 65
I LV Y SDQ H ++++A + G+ + A + K L AL + I D++ G
Sbjct: 193 INKLVVYASDQTHCALQKAAQIAGINPKNFRAIATSKATDFGLSPQALLSTILADIESGL 252
Query: 66 IPFYV 70
+P ++
Sbjct: 253 VPLFL 257
>sp|P48319|DCE1_PIG Glutamate decarboxylase 1 OS=Sus scrofa GN=GAD1 PE=2 SV=1
Length = 594
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 11 IANLVGYCSDQAHSSVERAGL---LGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIP 67
+ LV + S+ +H S+++AG G + + ++ K+ LEA I E +KG IP
Sbjct: 279 VPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADLEAKILEAKQKGYIP 338
Query: 68 FYVN 71
YVN
Sbjct: 339 LYVN 342
>sp|P14748|DCE1_FELCA Glutamate decarboxylase 1 OS=Felis catus GN=GAD1 PE=2 SV=3
Length = 594
Score = 33.1 bits (74), Expect = 0.51, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 11 IANLVGYCSDQAHSSVERAGL---LGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIP 67
+ LV + S+ +H S+++AG G + + ++ K+ LEA I E +KG +P
Sbjct: 279 VPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADLEAKILEAKQKGYVP 338
Query: 68 FYVN 71
YVN
Sbjct: 339 LYVN 342
>sp|A0PA85|DCE1_CANFA Glutamate decarboxylase 1 OS=Canis familiaris GN=GAD1 PE=2 SV=1
Length = 594
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 11 IANLVGYCSDQAHSSVERAGL---LGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIP 67
+ LV + S+ +H S+++AG G + + ++ K+ LEA I E +KG +P
Sbjct: 279 VPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADLEAKILEAKQKGYVP 338
Query: 68 FYVN 71
YVN
Sbjct: 339 LYVN 342
>sp|P54768|TYDC1_PAPSO Tyrosine/DOPA decarboxylase 1 OS=Papaver somniferum GN=TYDC1 PE=2
SV=1
Length = 518
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 11 IANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYK-----LRGDALEAAIEEDLKKGK 65
I LV Y SDQ S++++A + G+ + A + K L ++L++ I D++ G
Sbjct: 193 INKLVVYASDQTLSALQKAAQIAGINPKNFLAIATSKATNFGLSPNSLQSTILADIESGL 252
Query: 66 IPFYV 70
+P ++
Sbjct: 253 VPLFL 257
>sp|Q28D99|GADL1_XENTR Glutamate decarboxylase-like protein 1 (Fragment) OS=Xenopus
tropicalis GN=gadl1 PE=2 SV=2
Length = 511
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 3 PDWKDSDIIA--NLVGYCSDQAHSSVERAGLLGGV---TIRGLPADDSYKLRGDALEAAI 57
PD K + + LV + S++ H S+++A G+ + + DD K+ + LE I
Sbjct: 187 PDIKQKGLSSAPRLVMFTSEECHYSMKKAAAFLGIGTENVYFVKTDDRGKMIPEELENQI 246
Query: 58 EEDLKKGKIPFYVN 71
+ K+G +PF V+
Sbjct: 247 QRAKKEGAVPFLVS 260
>sp|P48318|DCE1_MOUSE Glutamate decarboxylase 1 OS=Mus musculus GN=Gad1 PE=2 SV=2
Length = 593
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 11 IANLVGYCSDQAHSSVERAGL---LGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIP 67
+ LV + S+ +H S+++AG G + + ++ K+ LEA I + +KG +P
Sbjct: 278 VPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADLEAKILDAKQKGYVP 337
Query: 68 FYVN 71
YVN
Sbjct: 338 LYVN 341
>sp|Q0VCA1|DCE1_BOVIN Glutamate decarboxylase 1 OS=Bos taurus GN=GAD1 PE=2 SV=1
Length = 594
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 11 IANLVGYCSDQAHSSVERAGL---LGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIP 67
+ LV + S+ +H S+++AG G + + ++ K+ LE I E +KG +P
Sbjct: 279 VPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADLETKILEAKQKGYVP 338
Query: 68 FYVN 71
YVN
Sbjct: 339 LYVN 342
>sp|P18088|DCE1_RAT Glutamate decarboxylase 1 OS=Rattus norvegicus GN=Gad1 PE=2 SV=1
Length = 593
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 11 IANLVGYCSDQAHSSVERAGL---LGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIP 67
+ LV + S+ +H S+++AG G + + ++ K+ LEA I + +KG +P
Sbjct: 278 VPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADLEAKILDAKQKGFVP 337
Query: 68 FYVN 71
YVN
Sbjct: 338 LYVN 341
>sp|B0KAI2|RIBBA_THEP3 Riboflavin biosynthesis protein RibBA OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=ribBA PE=3
SV=1
Length = 396
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 2 HPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTI------RG---LPADDSYKLRGDA 52
H + DI+ +L C DQ H+++ER G GGV + RG L +Y L+
Sbjct: 251 HSECLTGDILGSLRCDCGDQLHAAMERIGQEGGVLVYLRQEGRGIGLLNKIKAYHLQDQG 310
Query: 53 LEAAIEEDLKKGKIP 67
L+ +E ++K G P
Sbjct: 311 LD-TVEANIKLGFPP 324
>sp|C5DJL7|SLD7_LACTC Mitochondrial morphogenesis protein SLD7 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=SLD7 PE=3 SV=1
Length = 241
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 24 SSVERAGLLGGVTIRGLPADDS-----YKLRGDALEAAIEEDLKKGKIPFYVNQAHSSVE 78
SS + +LGG+ +RG+ ++ YK+ A+E A +L P Q +VE
Sbjct: 173 SSTASSCILGGLRLRGIRESEADYHKIYKMTYSAIEFAFRSELSNASPPISFEQVQETVE 232
>sp|B0K0Y9|RIBBA_THEPX Riboflavin biosynthesis protein RibBA OS=Thermoanaerobacter sp.
(strain X514) GN=ribBA PE=3 SV=1
Length = 396
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 2 HPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTI------RG---LPADDSYKLRGDA 52
H + DI+ +L C DQ H+++ER G GG+ + RG L +Y L+
Sbjct: 251 HSECLTGDILGSLRCDCGDQLHAAMERIGQEGGILVYLRQEGRGIGLLNKIKAYHLQDQG 310
Query: 53 LEAAIEEDLKKGKIP 67
L+ +E ++K G P
Sbjct: 311 LD-TVEANIKLGFPP 324
>sp|Q9UYT4|AMPM_PYRAB Methionine aminopeptidase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=map PE=3 SV=1
Length = 295
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 31/120 (25%)
Query: 4 DWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIR-GLPADDSYKLRGDALEAAI----- 57
D+ DI ++ GY +D A VT+R G+ DD + +ALE+AI
Sbjct: 77 DYLKIDIGVHIDGYIADTA------------VTVRVGMEEDDLMEAAREALESAISVARA 124
Query: 58 -----------EEDLKKGKIPFYVNQAHSSVERAGLLGGVTIRGL-PADDSYKLR-GDAL 104
E++++K VN + +ER L G++I + D+YKLR GD
Sbjct: 125 GVEIKELGRAIEDEIRKRGFNPIVNLSGHKIERYKLHAGISIPNIYRPHDNYKLREGDVF 184
>sp|Q04933|DLDH_TRYBB Dihydrolipoyl dehydrogenase OS=Trypanosoma brucei brucei PE=3 SV=1
Length = 479
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 22 AHSSVERAGLLG--GVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPFYVNQA 73
AH++ ER GL+G GVT+ + + L + +E LKK K+ +Y +A
Sbjct: 71 AHANFERYGLMGGAGVTMDVAKMQQQKEKSVNGLTSGVEYLLKKNKVTYYKGEA 124
>sp|Q8BKT8|HAUS7_MOUSE HAUS augmin-like complex subunit 7 OS=Mus musculus GN=Haus7 PE=1
SV=2
Length = 364
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 39 GLPADDSY-KLRGD--ALEAAIE--EDLKKGKIPF----YVNQAHSSVE--------RAG 81
G +DDSY K GD ++AA+E E LK PF Y+ + + +E R
Sbjct: 7 GAGSDDSYYKDVGDDCVVKAAVEVFEKLKGVNCPFLDGLYITEPKTIMELLCRPSKYRLD 66
Query: 82 LLGGVTIRGLPA--DDSYKLRGDALEAAIEEDLKKG 115
+L + IR P+ D L+G+AL+ I+E LK G
Sbjct: 67 ILEWMCIRVCPSLQDKFISLKGNALDLKIQEMLKLG 102
>sp|B3QWX6|KHSE_CHLT3 Homoserine kinase OS=Chloroherpeton thalassium (strain ATCC 35110 /
GB-78) GN=thrB PE=3 SV=1
Length = 319
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 24 SSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPFYVNQAHSSVERAGLL 83
S+V + G +G + L D Y+L G ALE + E ++ IP + + H++++ AG L
Sbjct: 208 SAVRQWGNVGALVAGLLRCD--YELIGRALEDVVAEPVRAPLIPGFYDVKHAALD-AGAL 264
Query: 84 GGVTIRGLPADDSYK---LRGDALEAAIEEDLKK 114
GG P+ ++ + + + A++E +K
Sbjct: 265 GGSIAGSGPSIFAFSDSLAKAETIAKAMQETFRK 298
>sp|Q1MDX5|Y3365_RHIL3 UPF0303 protein RL3365 OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=RL3365 PE=3 SV=1
Length = 162
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 25 SVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDL 61
+V+ +G +G VT+ GLP D + L +AL + +DL
Sbjct: 120 NVKGSGCIGAVTVSGLPQRDDHNLAVEALALMLAKDL 156
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 76 SVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDL 112
+V+ +G +G VT+ GLP D + L +AL + +DL
Sbjct: 120 NVKGSGCIGAVTVSGLPQRDDHNLAVEALALMLAKDL 156
>sp|B2T3I1|Y1734_BURPP UPF0303 protein Bphyt_1734 OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=Bphyt_1734 PE=3 SV=1
Length = 165
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 25 SVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKK 63
+V AG++G +T+ GLP ++L +AL A + D K
Sbjct: 121 TVAHAGVIGSITVSGLPQRADHELVVEALCAHLGHDYSK 159
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 76 SVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKK 114
+V AG++G +T+ GLP ++L +AL A + D K
Sbjct: 121 TVAHAGVIGSITVSGLPQRADHELVVEALCAHLGHDYSK 159
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.137 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,059,015
Number of Sequences: 539616
Number of extensions: 1854343
Number of successful extensions: 4119
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 4026
Number of HSP's gapped (non-prelim): 117
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)