Your job contains 1 sequence.
>psy9817
MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI
NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ
ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE
LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRITPAKI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9817
(231 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0261396 - symbol:Rpn3 "Regulatory particle non-ATP... 875 1.4e-87 1
MGI|MGI:98858 - symbol:Psmd3 "proteasome (prosome, macrop... 787 3.0e-78 1
RGD|1311470 - symbol:Psmd3 "proteasome (prosome, macropai... 787 3.0e-78 1
ZFIN|ZDB-GENE-040426-1444 - symbol:psmd3 "proteasome (pro... 784 6.2e-78 1
UNIPROTKB|Q2KJ46 - symbol:PSMD3 "26S proteasome non-ATPas... 782 1.0e-77 1
UNIPROTKB|E2QUY7 - symbol:PSMD3 "Uncharacterized protein"... 782 1.0e-77 1
UNIPROTKB|B4DT72 - symbol:PSMD3 "26S proteasome non-ATPas... 782 1.0e-77 1
UNIPROTKB|O43242 - symbol:PSMD3 "26S proteasome non-ATPas... 782 1.0e-77 1
UNIPROTKB|F1RXA7 - symbol:LOC100512253 "Uncharacterized p... 776 4.3e-77 1
UNIPROTKB|I3LL55 - symbol:I3LL55 "Uncharacterized protein... 706 1.1e-69 1
UNIPROTKB|H9L061 - symbol:H9L061 "Uncharacterized protein... 625 4.3e-61 1
UNIPROTKB|H9L164 - symbol:H9L164 "Uncharacterized protein... 625 4.3e-61 1
DICTYBASE|DDB_G0288621 - symbol:psmD3 "26S proteasome non... 596 5.1e-58 1
TAIR|locus:2204385 - symbol:AT1G75990 species:3702 "Arabi... 580 2.5e-56 1
POMBASE|SPBC119.01 - symbol:rpn3 "19S proteasome regulato... 565 9.9e-55 1
TAIR|locus:2198561 - symbol:EMB2719 "EMBRYO DEFECTIVE 271... 558 5.5e-54 1
UNIPROTKB|G4NDR0 - symbol:MGG_00884 "26S proteasome non-A... 536 1.2e-51 1
ASPGD|ASPL0000036390 - symbol:AN10337 species:162425 "Eme... 532 3.1e-51 1
GENEDB_PFALCIPARUM|MAL13P1.190 - symbol:MAL13P1.190 "prot... 530 5.1e-51 1
UNIPROTKB|Q8IDV2 - symbol:MAL13P1.190 "Proteasome regulat... 530 5.1e-51 1
WB|WBGene00004460 - symbol:rpn-3 species:6239 "Caenorhabd... 523 2.8e-50 1
UNIPROTKB|Q04908 - symbol:rpn-3 "26S proteasome non-ATPas... 523 2.8e-50 1
CGD|CAL0001433 - symbol:RPN3 species:5476 "Candida albica... 500 7.7e-48 1
SGD|S000000823 - symbol:RPN3 "non-ATPase regulatory subun... 412 1.6e-38 1
DICTYBASE|DDB_G0284241 - symbol:DDB_G0284241 "proteasome ... 113 0.00018 2
>FB|FBgn0261396 [details] [associations]
symbol:Rpn3 "Regulatory particle non-ATPase 3" species:7227
"Drosophila melanogaster" [GO:0004175 "endopeptidase activity"
evidence=ISS;IDA] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS;IDA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 GO:GO:0030234 EMBL:AE014134 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0004175
Gene3D:1.25.40.10 GO:GO:0008541 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 BRENDA:3.4.25.1 eggNOG:NOG251646 KO:K03033
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:M63010 EMBL:AY089337
EMBL:BT044249 PIR:JH0665 RefSeq:NP_477300.1 UniGene:Dm.4848
ProteinModelPortal:P25161 DIP:DIP-18295N IntAct:P25161
MINT:MINT-982894 STRING:P25161 PaxDb:P25161 PRIDE:P25161
EnsemblMetazoa:FBtr0302289 GeneID:35176 KEGG:dme:Dmel_CG42641
CTD:35176 FlyBase:FBgn0261396 InParanoid:Q8T460 OrthoDB:EOG4Z08MX
PhylomeDB:P25161 ChiTaRS:Rpn3 GenomeRNAi:35176 NextBio:792228
Bgee:P25161 GermOnline:CG10484 Uniprot:P25161
Length = 494
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 170/231 (73%), Positives = 201/231 (87%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M+KI+ +NRRT DLI AK YFY SRV EL N+L+ +RSFL+ARLR ATLRNDFEGQAVLI
Sbjct: 153 MAKISIQNRRTLDLIGAKSYFYFSRVAELKNSLEGIRSFLHARLRTATLRNDFEGQAVLI 212
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
NCLLRNYLHY LYDQADKLVKKS +PE+ASNNEWARF +YLGRIKA +LEYS AHK+LVQ
Sbjct: 213 NCLLRNYLHYALYDQADKLVKKSVYPESASNNEWARFLYYLGRIKAAKLEYSDAHKHLVQ 272
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
ALRK+PQ AA+GFRQT QKL +VVELLLG+IP+R +FRQA LR++L YFQLTQAVR+G
Sbjct: 273 ALRKSPQHAAIGFRQTVQKLIIVVELLLGNIPERVVFRQAGLRQSLGAYFQLTQAVRLGN 332
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRITPAKI 231
L++F +V++ YG +F+ D+TF LI+RLRHNVIKTAIRSIG SYSRI+P I
Sbjct: 333 LKRFGDVVSQYGPKFQLDHTFTLIIRLRHNVIKTAIRSIGLSYSRISPQDI 383
>MGI|MGI:98858 [details] [associations]
symbol:Psmd3 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 MGI:MGI:98858 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 EMBL:CH466556
Gene3D:1.25.40.10 GO:GO:0042176 EMBL:AL590963 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909
KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703
OMA:NQSVKAM OrthoDB:EOG4VHK6D ChiTaRS:PSMD3 EMBL:M25149
EMBL:AK145488 EMBL:AK164593 EMBL:AK165520 EMBL:AK166683
EMBL:AK166714 EMBL:AK167285 EMBL:AK169690 EMBL:BC003197
IPI:IPI00314439 PIR:I49504 RefSeq:NP_033465.1 UniGene:Mm.12194
ProteinModelPortal:P14685 IntAct:P14685 STRING:P14685
PhosphoSite:P14685 PaxDb:P14685 PRIDE:P14685
Ensembl:ENSMUST00000017365 GeneID:22123 KEGG:mmu:22123
InParanoid:Q3TP95 NextBio:301989 Bgee:P14685 Genevestigator:P14685
GermOnline:ENSMUSG00000017221 Uniprot:P14685
Length = 530
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 151/231 (65%), Positives = 185/231 (80%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M KI+++NRR DL+AAKCY+YH+RV+E + LD VRSFL+ARLR ATLR+D +GQA L+
Sbjct: 188 MQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLL 247
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYLHY+LYDQA+KLV KS FPE A+NNEWAR+ +Y GRIKA++LEYS A + +
Sbjct: 248 NLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTN 307
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
ALRKAPQ AVGF+QT KL +VVELLLG+IPDR FRQ L+R+L PYF LTQAVR G
Sbjct: 308 ALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGN 367
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRITPAKI 231
L KFN+VL +G +F+TD T+ LI+RLRHNVIKT +R I SYSRI+ A I
Sbjct: 368 LAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGVRMISLSYSRISLADI 418
>RGD|1311470 [details] [associations]
symbol:Psmd3 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=IEA;ISO] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 RGD:1311470 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 Gene3D:1.25.40.10 GO:GO:0000502
GO:GO:0042176 EMBL:CH473948 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 CTD:5709
GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703 OMA:NQSVKAM
OrthoDB:EOG4VHK6D EMBL:BC085881 IPI:IPI00370009
RefSeq:NP_001008282.1 UniGene:Rn.101332 IntAct:Q5U2S7 STRING:Q5U2S7
Ensembl:ENSRNOT00000039836 GeneID:287670 KEGG:rno:287670
UCSC:RGD:1311470 InParanoid:Q5U2S7 NextBio:626775
Genevestigator:Q5U2S7 Uniprot:Q5U2S7
Length = 530
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 151/231 (65%), Positives = 185/231 (80%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M KI+++NRR DL+AAKCY+YH+RV+E + LD VRSFL+ARLR ATLR+D +GQA L+
Sbjct: 188 MQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLL 247
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYLHY+LYDQA+KLV KS FPE A+NNEWAR+ +Y GRIKA++LEYS A + +
Sbjct: 248 NLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTN 307
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
ALRKAPQ AVGF+QT KL +VVELLLG+IPDR FRQ L+R+L PYF LTQAVR G
Sbjct: 308 ALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGN 367
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRITPAKI 231
L KFN+VL +G +F+TD T+ LI+RLRHNVIKT +R I SYSRI+ A I
Sbjct: 368 LAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGVRMISLSYSRISLADI 418
>ZFIN|ZDB-GENE-040426-1444 [details] [associations]
symbol:psmd3 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 3" species:7955 "Danio rerio" [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
ZFIN:ZDB-GENE-040426-1444 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 Gene3D:1.25.40.10 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 HOGENOM:HOG000193909
KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703
EMBL:FP017234 EMBL:BC056598 EMBL:BC066451 IPI:IPI00507046
RefSeq:NP_956866.1 UniGene:Dr.13797 Ensembl:ENSDART00000027158
GeneID:393544 KEGG:dre:393544 InParanoid:Q6NYV1 NextBio:20814565
Uniprot:Q6NYV1
Length = 503
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 153/231 (66%), Positives = 182/231 (78%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
+ KI S+NRR DL+AAKCY+YHSRV+E N LD VRSFL+ RLR ATLR+D +GQA L+
Sbjct: 161 LQKIGSQNRRALDLVAAKCYYYHSRVYEFLNQLDVVRSFLHTRLRTATLRHDADGQATLL 220
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYL YNLYDQA+KLV KS FPE A+NNEWAR+ +Y GRIKA++LEYS A + L
Sbjct: 221 NLLLRNYLQYNLYDQAEKLVSKSVFPELANNNEWARYLYYTGRIKAIQLEYSEARRTLTN 280
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
ALRKAPQ AVGF+QT KL +VVELLLG+IPDR FRQ L+R+L PYF LTQAVR G
Sbjct: 281 ALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGN 340
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRITPAKI 231
L KFN+VL +G +F+TD T+ LI+RLRHNVIKT +R I SYSRI+ A I
Sbjct: 341 LAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGVRMISLSYSRISLADI 391
>UNIPROTKB|Q2KJ46 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
Gene3D:1.25.40.10 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033
EMBL:BC105526 IPI:IPI00707518 RefSeq:NP_001039365.1
UniGene:Bt.51586 ProteinModelPortal:Q2KJ46 STRING:Q2KJ46
PRIDE:Q2KJ46 Ensembl:ENSBTAT00000028608 GeneID:504937
KEGG:bta:504937 CTD:5709 GeneTree:ENSGT00490000043406
HOVERGEN:HBG000703 InParanoid:Q2KJ46 OMA:NQSVKAM OrthoDB:EOG4VHK6D
NextBio:20866898 Uniprot:Q2KJ46
Length = 534
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 150/231 (64%), Positives = 184/231 (79%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M KI+++NRR DL+AAKCY+YH+RV+E + LD VRSFL+ARLR ATLR+D +GQA L+
Sbjct: 192 MQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDTDGQATLL 251
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYLHY+LYDQA+KLV KS FPE A+NNEWAR+ +Y GRIKA++LEYS A + +
Sbjct: 252 NLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTN 311
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
ALRKAPQ AVGF+QT KL +VVELLLG+IPDR FRQ L+R+L PYF LTQAVR G
Sbjct: 312 ALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGN 371
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRITPAKI 231
L KFN+VL +G +F+ D T+ LI+RLRHNVIKT +R I SYSRI+ A I
Sbjct: 372 LAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADI 422
>UNIPROTKB|E2QUY7 [details] [associations]
symbol:PSMD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
Gene3D:1.25.40.10 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406
OMA:NQSVKAM EMBL:AAEX03006469 RefSeq:XP_548138.2
Ensembl:ENSCAFT00000025807 GeneID:491018 KEGG:cfa:491018
Uniprot:E2QUY7
Length = 534
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 150/231 (64%), Positives = 184/231 (79%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M KI+++NRR DL+AAKCY+YH+RV+E + LD VRSFL+ARLR ATLR+D +GQA L+
Sbjct: 192 MQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLL 251
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYLHY+LYDQA+KLV KS FPE A+NNEWAR+ +Y GRIKA++LEYS A + +
Sbjct: 252 NLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTN 311
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
ALRKAPQ AVGF+QT KL +VVELLLG+IPDR FRQ L+R+L PYF LTQAVR G
Sbjct: 312 ALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGN 371
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRITPAKI 231
L KFN+VL +G +F+ D T+ LI+RLRHNVIKT +R I SYSRI+ A I
Sbjct: 372 LAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADI 422
>UNIPROTKB|B4DT72 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
EMBL:AC090844 InterPro:IPR013143 SMART:SM00753 HOVERGEN:HBG000703
UniGene:Hs.12970 HGNC:HGNC:9560 ChiTaRS:PSMD3 EMBL:AK300081
IPI:IPI01014869 STRING:B4DT72 Ensembl:ENST00000541736
Uniprot:B4DT72
Length = 356
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 150/231 (64%), Positives = 184/231 (79%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M KI+++NRR DL+AAKCY+YH+RV+E + LD VRSFL+ARLR ATLR+D +GQA L+
Sbjct: 54 MQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLL 113
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYLHY+LYDQA+KLV KS FPE A+NNEWAR+ +Y GRIKA++LEYS A + +
Sbjct: 114 NLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTN 173
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
ALRKAPQ AVGF+QT KL +VVELLLG+IPDR FRQ L+R+L PYF LTQAVR G
Sbjct: 174 ALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGN 233
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRITPAKI 231
L KFN+VL +G +F+ D T+ LI+RLRHNVIKT +R I SYSRI+ A I
Sbjct: 234 LAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADI 284
>UNIPROTKB|O43242 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0030234 GO:GO:0005654 GO:GO:0002479
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 EMBL:CH471152 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909
KO:K03033 CTD:5709 HOVERGEN:HBG000703 OMA:NQSVKAM OrthoDB:EOG4VHK6D
EMBL:D67025 EMBL:BT007217 EMBL:AK022896 EMBL:BC000074 EMBL:BC004859
EMBL:BC012302 EMBL:BC020518 EMBL:BC025686 IPI:IPI00011603
RefSeq:NP_002800.2 UniGene:Hs.12970 ProteinModelPortal:O43242
DIP:DIP-27571N IntAct:O43242 MINT:MINT-5003834 STRING:O43242
PhosphoSite:O43242 PaxDb:O43242 PeptideAtlas:O43242 PRIDE:O43242
DNASU:5709 Ensembl:ENST00000264639 GeneID:5709 KEGG:hsa:5709
UCSC:uc002htn.1 GeneCards:GC17P038137 HGNC:HGNC:9560 HPA:CAB017038
neXtProt:NX_O43242 PharmGKB:PA38123 InParanoid:O43242
PhylomeDB:O43242 ChiTaRS:PSMD3 GenomeRNAi:5709 NextBio:22182
ArrayExpress:O43242 Bgee:O43242 CleanEx:HS_PSMD3
Genevestigator:O43242 GermOnline:ENSG00000108344 Uniprot:O43242
Length = 534
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 150/231 (64%), Positives = 184/231 (79%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M KI+++NRR DL+AAKCY+YH+RV+E + LD VRSFL+ARLR ATLR+D +GQA L+
Sbjct: 192 MQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLL 251
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYLHY+LYDQA+KLV KS FPE A+NNEWAR+ +Y GRIKA++LEYS A + +
Sbjct: 252 NLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTN 311
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
ALRKAPQ AVGF+QT KL +VVELLLG+IPDR FRQ L+R+L PYF LTQAVR G
Sbjct: 312 ALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGN 371
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRITPAKI 231
L KFN+VL +G +F+ D T+ LI+RLRHNVIKT +R I SYSRI+ A I
Sbjct: 372 LAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADI 422
>UNIPROTKB|F1RXA7 [details] [associations]
symbol:LOC100512253 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:CU928026
Ensembl:ENSSSCT00000019042 Uniprot:F1RXA7
Length = 536
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 151/233 (64%), Positives = 184/233 (78%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M KI+++NRR DL+AAKCY+YH+RV+E + LD VRSFL+ARLR ATLR+D +GQA L+
Sbjct: 192 MQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLL 251
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYL--GRIKAVRLEYSTAHKNL 118
N LLRNYLHYNLYDQA+KLV KS FPE A+NNEWAR+ +Y GRIKA++LEYS A + +
Sbjct: 252 NLLLRNYLHYNLYDQAEKLVSKSVFPEQANNNEWARYLYYTDPGRIKAIQLEYSEARRTM 311
Query: 119 VQALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRM 178
ALRKAPQ AVGF+QT KL +VVELLLG+IPDR FRQ L+R+L PYF LTQAVR
Sbjct: 312 TNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRT 371
Query: 179 GELQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRITPAKI 231
G L KFN+VL +G +F+ D T+ LI+RLRHNVIKT +R I SYSRI+ A I
Sbjct: 372 GNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADI 424
>UNIPROTKB|I3LL55 [details] [associations]
symbol:I3LL55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR013586
Pfam:PF08375 GO:GO:0030234 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00490000043406 Ensembl:ENSSSCT00000026850 OMA:XAMRFPP
Uniprot:I3LL55
Length = 505
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 139/221 (62%), Positives = 171/221 (77%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M KI+++NRR DL+AAKCY+YH+RV+E + LD VRSFL+ARLR ATLR+D +GQA L+
Sbjct: 193 MQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLL 252
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYL--GRIKAVRLEYSTAHKNL 118
N LLRNYLHYNLYDQA+KLV KS FPE A+NNEWAR+ +Y GRIKA++LEYS A + +
Sbjct: 253 NLLLRNYLHYNLYDQAEKLVSKSVFPEQANNNEWARYLYYTDPGRIKAIQLEYSEARRTM 312
Query: 119 VQALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRM 178
ALRKAPQ AVGF+QT KL +VVELLLG+IP L+R+L PYF LTQAVR
Sbjct: 313 TNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPXS-------LKRSLMPYFLLTQAVRT 365
Query: 179 GELQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSI 219
G L KFN+VL +G +F+ D T+ LI+RLRHNVIKT +R I
Sbjct: 366 GNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMI 406
>UNIPROTKB|H9L061 [details] [associations]
symbol:H9L061 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR013586 Pfam:PF08375 GO:GO:0030234
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 GeneTree:ENSGT00490000043406 OMA:NQSVKAM
EMBL:AADN02050853 EMBL:AADN02050851 EMBL:AADN02050852
Ensembl:ENSGALT00000021992 Uniprot:H9L061
Length = 512
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 118/174 (67%), Positives = 141/174 (81%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M KI+S+NRR DL+ AKCY+YHSR++E N LD VRSFL+ARLR ATLR+D +GQA L+
Sbjct: 176 MQKISSQNRRALDLVVAKCYYYHSRIYEFLNKLDVVRSFLHARLRTATLRHDADGQATLL 235
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYLHYNLYDQA+KLV KS FPE A+NNEWAR+ +Y GRIKA++LEYS A + +
Sbjct: 236 NLLLRNYLHYNLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTN 295
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQ 174
ALRKAPQ AVGF+QT KL +VVELLLG+IPDR FRQ L+R+L PYF LTQ
Sbjct: 296 ALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQ 349
>UNIPROTKB|H9L164 [details] [associations]
symbol:H9L164 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA]
InterPro:IPR013586 Pfam:PF08375 GO:GO:0030234 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00490000043406 EMBL:AADN02050853 EMBL:AADN02050851
EMBL:AADN02050852 Ensembl:ENSGALT00000029758 Uniprot:H9L164
Length = 457
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 118/174 (67%), Positives = 141/174 (81%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M KI+S+NRR DL+ AKCY+YHSR++E N LD VRSFL+ARLR ATLR+D +GQA L+
Sbjct: 128 MQKISSQNRRALDLVVAKCYYYHSRIYEFLNKLDVVRSFLHARLRTATLRHDADGQATLL 187
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYLHYNLYDQA+KLV KS FPE A+NNEWAR+ +Y GRIKA++LEYS A + +
Sbjct: 188 NLLLRNYLHYNLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTN 247
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQ 174
ALRKAPQ AVGF+QT KL +VVELLLG+IPDR FRQ L+R+L PYF LTQ
Sbjct: 248 ALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQ 301
>DICTYBASE|DDB_G0288621 [details] [associations]
symbol:psmD3 "26S proteasome non-ATPase regulatory
subunit 3" species:44689 "Dictyostelium discoideum" [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 dictyBase:DDB_G0288621 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GenomeReviews:CM000154_GR EMBL:AAFI02000119 GO:GO:0004175
GO:GO:0000502 GO:GO:0006511 InterPro:IPR000082 GO:GO:0042176
InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646 KO:K03033
OMA:NQSVKAM RefSeq:XP_001134521.1 STRING:Q1ZXD3 PRIDE:Q1ZXD3
EnsemblProtists:DDB0232980 GeneID:8626718 KEGG:ddi:DDB_G0288621
Uniprot:Q1ZXD3
Length = 504
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 116/227 (51%), Positives = 165/227 (72%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
M + S R T +++K +FY+S +E+TNNL +VRS L + LR ATLR++ EGQA +I
Sbjct: 160 METVQSNTRITLYPLSSKIFFYYSLSYEMTNNLHEVRSTLLSALRTATLRHNDEGQATII 219
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYL YNL++QADKL+ + FPE+AS+N++AR+ +Y GRI+A++LEY+ + K L Q
Sbjct: 220 NLLLRNYLEYNLFEQADKLLANTQFPESASSNQFARYFYYQGRIRAIQLEYAESFKFLTQ 279
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
A+RKAPQ A GFR+T KL +V+LL+G+IP+R F Q L+ AL PYF LT+AVR+G+
Sbjct: 280 AIRKAPQNTAGGFRRTVYKLLSIVQLLMGEIPERNTFSQKQLKIALKPYFHLTEAVRVGD 339
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRIT 227
L FN+ L + F++D TF L+ RLR NVIK ++ + +YSRI+
Sbjct: 340 LGSFNQALEQNSDIFKSDQTFTLVQRLRSNVIKAGLKKLNTAYSRIS 386
>TAIR|locus:2204385 [details] [associations]
symbol:AT1G75990 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0030234 EMBL:AC007396 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0030163 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646
HOGENOM:HOG000193909 KO:K03033 ProtClustDB:CLSN2682716
EMBL:AY057508 IPI:IPI00526971 PIR:E96788 RefSeq:NP_177726.1
UniGene:At.15402 ProteinModelPortal:Q9LQR8 SMR:Q9LQR8 IntAct:Q9LQR8
STRING:Q9LQR8 PaxDb:Q9LQR8 PRIDE:Q9LQR8 EnsemblPlants:AT1G75990.1
GeneID:843931 KEGG:ath:AT1G75990 TAIR:At1g75990 InParanoid:Q9LQR8
OMA:LKHDNET PhylomeDB:Q9LQR8 Genevestigator:Q9LQR8
GermOnline:AT1G75990 Uniprot:Q9LQR8
Length = 487
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 117/227 (51%), Positives = 163/227 (71%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
++++ S NRRT D+IA+K YFY+S +ELTN+L ++RS L A ATLR+D GQ L+
Sbjct: 145 IARLKSVNRRTVDVIASKLYFYYSLSYELTNDLAEIRSTLLALHHSATLRHDELGQETLL 204
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYLHYNLYDQA+KL K+ E SN ++ R+ FYLG+I+ ++LEY+ A ++L+Q
Sbjct: 205 NLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ 264
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
A RKAP A++GFR K A++V LLLG+IP+R IF Q + + L PYF+LT AVR+G+
Sbjct: 265 AARKAP-VASLGFRIQCNKWAIIVRLLLGEIPERSIFTQKGMEKTLRPYFELTNAVRIGD 323
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRIT 227
L+ F ++ + F D T LI+RLRHNVI+T +R+I SYSRI+
Sbjct: 324 LELFGKIQEKFAKTFAEDRTHNLIVRLRHNVIRTGLRNISISYSRIS 370
>POMBASE|SPBC119.01 [details] [associations]
symbol:rpn3 "19S proteasome regulatory subunit Rpn3"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=TAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008541 "proteasome regulatory particle,
lid subcomplex" evidence=ISO] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 PomBase:SPBC119.01 GO:GO:0005634 GO:GO:0007346
GO:GO:0030234 GO:GO:0043161 EMBL:CU329671 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GenomeReviews:CU329671_GR
GO:GO:0008541 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 OMA:NQSVKAM
PIR:T39299 RefSeq:NP_595282.2 ProteinModelPortal:O42897
IntAct:O42897 STRING:O42897 EnsemblFungi:SPBC119.01.1
GeneID:2540109 KEGG:spo:SPBC119.01 OrthoDB:EOG4350FR
NextBio:20801245 Uniprot:O42897
Length = 497
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 115/228 (50%), Positives = 163/228 (71%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
++++ S +RRT D IAAK YFY+ E N + R+ L + R A+LR+D E QA+++
Sbjct: 154 IARLQSYDRRTLDQIAAKLYFYYILFFEKCNRSVECRNTLLSVHRTASLRHDSETQAMVL 213
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
LLRNY+ +NLYDQAD+LV K++F NASNN R+ +YLGRI+A++L+Y+TAH++LV
Sbjct: 214 TLLLRNYIQFNLYDQADRLVSKTSFLTNASNNLAIRYQYYLGRIRAIQLDYTTAHEHLVS 273
Query: 121 ALRKAPQTA-AVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMG 179
A+RKAP T AV F + KL +VV+LL+G+IP+R+IFRQ L + L PY +++QAVR+G
Sbjct: 274 AIRKAPNTVYAVQFLEAVYKLHIVVQLLMGEIPERRIFRQKSLEKTLVPYLRISQAVRIG 333
Query: 180 ELQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRIT 227
+L F + L+ Y +FR D + LI RLRH VIKT +R I SYSRI+
Sbjct: 334 DLCAFTDALSKYEAEFRFDGLYTLICRLRHTVIKTGLRMISLSYSRIS 381
>TAIR|locus:2198561 [details] [associations]
symbol:EMB2719 "EMBRYO DEFECTIVE 2719" species:3702
"Arabidopsis thaliana" [GO:0000502 "proteasome complex"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
EMBL:AC022472 InterPro:IPR013143 SMART:SM00753 EMBL:AY120740
IPI:IPI00528285 PIR:G86335 RefSeq:NP_173447.1 UniGene:At.15440
ProteinModelPortal:Q9LNU4 SMR:Q9LNU4 IntAct:Q9LNU4 STRING:Q9LNU4
PaxDb:Q9LNU4 PRIDE:Q9LNU4 ProMEX:Q9LNU4 EnsemblPlants:AT1G20200.1
GeneID:838609 KEGG:ath:AT1G20200 TAIR:At1g20200 eggNOG:NOG251646
HOGENOM:HOG000193909 InParanoid:Q9LNU4 KO:K03033 OMA:NYLSTSH
PhylomeDB:Q9LNU4 ProtClustDB:CLSN2682716 Genevestigator:Q9LNU4
GermOnline:AT1G20200 Uniprot:Q9LNU4
Length = 488
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 115/227 (50%), Positives = 161/227 (70%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
++++ + NRRT D+IA++ YFY+S +E T +L ++R L A ATLR+D GQ L+
Sbjct: 146 IARLKNVNRRTIDVIASRLYFYYSLSYEQTGDLAEIRGTLLALHHSATLRHDELGQETLL 205
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
N LLRNYLHYNLYDQA+KL K+ E SN ++ R+ FYLG+I+ ++LEY+ A ++L+Q
Sbjct: 206 NLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQ 265
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
A RKAP AA+GFR K A++V LLLG+IP+R IF Q + +AL PYF+LT AVR+G+
Sbjct: 266 AARKAP-IAALGFRIQCNKWAILVRLLLGEIPERSIFTQKGMEKALRPYFELTNAVRIGD 324
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRIT 227
L+ F V + + F D T LI+RLRHNVI+T +R+I SYSRI+
Sbjct: 325 LELFRTVQEKFLDTFAQDRTHNLIVRLRHNVIRTGLRNISISYSRIS 371
>UNIPROTKB|G4NDR0 [details] [associations]
symbol:MGG_00884 "26S proteasome non-ATPase regulatory
subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 GO:GO:0030234 EMBL:CM001235
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 KO:K03033
RefSeq:XP_003718082.1 EnsemblFungi:MGG_00884T0 GeneID:2674538
KEGG:mgr:MGG_00884 Uniprot:G4NDR0
Length = 557
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 120/234 (51%), Positives = 151/234 (64%)
Query: 3 KITSENRRTSDLIAAKCYFYHSRVHELTNNLD--------KVRSFLNARLRIATLRNDFE 54
+I S NRRT D ++AK YFY+S E L +R L A LR A LR D +
Sbjct: 203 RIHSLNRRTLDSLSAKVYFYYSLFFEKLAPLPPSPQSPSVSIRPTLLAALRTAVLRKDID 262
Query: 55 GQAVLINCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTA 114
QA +I LLRNYL + +QAD LV + FPENA+NN+ AR+ +YLGRI+A++L Y+ A
Sbjct: 263 TQASVIVLLLRNYLATSHINQADLLVSHTQFPENAANNQVARYLYYLGRIRAIQLRYTEA 322
Query: 115 HKNLVQALRKAPQT-AAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLT 173
H++L A RKAP + AVGF QT KL +VVELL+GDIPDR FRQ L AL PYF L
Sbjct: 323 HEHLTAATRKAPSSNCAVGFSQTATKLLLVVELLMGDIPDRATFRQPTLEEALHPYFLLV 382
Query: 174 QAVRMGELQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRIT 227
QAVR+G L F + + + FR D T+ LILRLR NVI+T IR + SYSRI+
Sbjct: 383 QAVRVGNLDNFETTIADHADTFRKDGTYTLILRLRQNVIRTGIRMMSLSYSRIS 436
>ASPGD|ASPL0000036390 [details] [associations]
symbol:AN10337 species:162425 "Emericella nidulans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 EMBL:BN001306 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 OMA:NYLSTSH EnsemblFungi:CADANIAT00010340
Uniprot:C8VJN4
Length = 641
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 117/236 (49%), Positives = 156/236 (66%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLD--------KVRSFLNARLRIATLRND 52
+ ++ + NRRT D +AA+ YFY+S E L +R L A LR A LR D
Sbjct: 285 IERLRALNRRTLDSLAARVYFYYSLFFEQIAPLPPSPAAAITSIRQPLLAALRTAVLRKD 344
Query: 53 FEGQAVLINCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYS 112
+ QA ++ LLRNYL + QAD L+ + FP +ASNN+ AR+ +YLGRI+A++L+Y+
Sbjct: 345 VDTQATVMTLLLRNYLSTSHISQADLLISHNQFPPSASNNQIARYLYYLGRIRAIQLQYT 404
Query: 113 TAHKNLVQALRKAPQT-AAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQ 171
AH +L+ A RK+P + +A GF Q + KL VVVELL+GDIPDR IFRQA L RAL PYF
Sbjct: 405 EAHGHLIGATRKSPASHSARGFYQASHKLLVVVELLMGDIPDRAIFRQAALERALHPYFL 464
Query: 172 LTQAVRMGELQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRIT 227
L QAV +G+L F ++ T+ + FR D T+ LILRLR NVIKT IR + SYSRI+
Sbjct: 465 LVQAVSVGDLDGFLNIVNTHSSTFRKDGTYTLILRLRQNVIKTGIRMMSLSYSRIS 520
>GENEDB_PFALCIPARUM|MAL13P1.190 [details] [associations]
symbol:MAL13P1.190 "proteasome regulatory
component, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 GO:GO:0004175 GO:GO:0006511 GO:GO:0042176
EMBL:AL844509 InterPro:IPR013143 SMART:SM00753 GO:GO:0005838
HOGENOM:HOG000193909 KO:K03033 OMA:NQSVKAM RefSeq:XP_001350108.1
ProteinModelPortal:Q8IDV2 EnsemblProtists:MAL13P1.190:mRNA
GeneID:813745 KEGG:pfa:MAL13P1.190 EuPathDB:PlasmoDB:PF3D7_1338100
ProtClustDB:CLSZ2733770 Uniprot:Q8IDV2
Length = 503
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 108/230 (46%), Positives = 154/230 (66%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
+++I NRR+ D I AK YFY+S +HEL L +VR L R A L D Q V++
Sbjct: 158 INRINKINRRSLDYINAKVYFYYSWIHELGGKLSQVRQKLLFIYRNACLHRDIMTQTVVV 217
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNN-EWARFHFYLGRIKAVRLEYSTAHKNLV 119
N +LR+Y+ +NLYD A + + K++FPEN S+N ++AR+ +Y+G+I AV+L+YS AH+ +
Sbjct: 218 NLILRDYIKHNLYDLAVRFISKTSFPENLSSNAQYARYLYYIGKILAVQLDYSEAHRKIT 277
Query: 120 QALRKAPQ--TAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVR 177
QALRKAPQ +A GF+ K+ +VVELL+GDIPDR IF ++ + L PY + AVR
Sbjct: 278 QALRKAPQHTQSAKGFKLAATKMEIVVELLMGDIPDRSIFSNKIMYKKLIPYKHVVSAVR 337
Query: 178 MGELQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRIT 227
G++ KF +V+ Y + F D + LI R+ HNVIKTA+R I SYSRI+
Sbjct: 338 NGDINKFAQVMNNYTDLFIHDGVYLLIKRIHHNVIKTALRIINLSYSRIS 387
>UNIPROTKB|Q8IDV2 [details] [associations]
symbol:MAL13P1.190 "Proteasome regulatory component,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0004175 GO:GO:0006511 GO:GO:0042176 EMBL:AL844509
InterPro:IPR013143 SMART:SM00753 GO:GO:0005838 HOGENOM:HOG000193909
KO:K03033 OMA:NQSVKAM RefSeq:XP_001350108.1
ProteinModelPortal:Q8IDV2 EnsemblProtists:MAL13P1.190:mRNA
GeneID:813745 KEGG:pfa:MAL13P1.190 EuPathDB:PlasmoDB:PF3D7_1338100
ProtClustDB:CLSZ2733770 Uniprot:Q8IDV2
Length = 503
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 108/230 (46%), Positives = 154/230 (66%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
+++I NRR+ D I AK YFY+S +HEL L +VR L R A L D Q V++
Sbjct: 158 INRINKINRRSLDYINAKVYFYYSWIHELGGKLSQVRQKLLFIYRNACLHRDIMTQTVVV 217
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNN-EWARFHFYLGRIKAVRLEYSTAHKNLV 119
N +LR+Y+ +NLYD A + + K++FPEN S+N ++AR+ +Y+G+I AV+L+YS AH+ +
Sbjct: 218 NLILRDYIKHNLYDLAVRFISKTSFPENLSSNAQYARYLYYIGKILAVQLDYSEAHRKIT 277
Query: 120 QALRKAPQ--TAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVR 177
QALRKAPQ +A GF+ K+ +VVELL+GDIPDR IF ++ + L PY + AVR
Sbjct: 278 QALRKAPQHTQSAKGFKLAATKMEIVVELLMGDIPDRSIFSNKIMYKKLIPYKHVVSAVR 337
Query: 178 MGELQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRIT 227
G++ KF +V+ Y + F D + LI R+ HNVIKTA+R I SYSRI+
Sbjct: 338 NGDINKFAQVMNNYTDLFIHDGVYLLIKRIHHNVIKTALRIINLSYSRIS 387
>WB|WBGene00004460 [details] [associations]
symbol:rpn-3 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0006915 GO:GO:0030234 GO:GO:0002119 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646
HOGENOM:HOG000193909 KO:K03033 GeneTree:ENSGT00490000043406
OMA:NQSVKAM EMBL:FO080722 PIR:S44783 RefSeq:NP_498869.1
ProteinModelPortal:Q04908 DIP:DIP-25350N IntAct:Q04908
MINT:MINT-211615 STRING:Q04908 PaxDb:Q04908
EnsemblMetazoa:C30C11.2.1 EnsemblMetazoa:C30C11.2.2 GeneID:176196
KEGG:cel:CELE_C30C11.2 UCSC:C30C11.2 CTD:176196 WormBase:C30C11.2
InParanoid:Q04908 NextBio:891536 Uniprot:Q04908
Length = 504
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 112/226 (49%), Positives = 150/226 (66%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
++ I + +RRT D +AAK ++ ++E L + FLN+RLR ATLRN E QAVLI
Sbjct: 160 LTSIYNFDRRTLDGLAAKTLYFLCVIYEREGRLFDHQGFLNSRLRTATLRNFSESQAVLI 219
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
LLR YL Y A LV K AFP+NASNN+ AR+ +Y GRIKA++L+Y++A +Q
Sbjct: 220 CWLLRCYLINRQYQSAAHLVSKVAFPDNASNNDLARYMYYQGRIKALQLDYNSAAGYFLQ 279
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
A RKAPQ A+GF+Q QK VV+ LL G+IPDR +FRQ + R+ L+ Y L++ VR G+
Sbjct: 280 AQRKAPQEGAIGFKQAVQKWVVVIGLLQGEIPDRSVFRQPIYRKCLAHYLDLSRGVRDGD 339
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRI 226
+ +FN L + QF D T LI+RLR NVIKTAI+ I +YSRI
Sbjct: 340 VARFNHNLEQFKTQFEADDTLTLIVRLRQNVIKTAIKQISLAYSRI 385
>UNIPROTKB|Q04908 [details] [associations]
symbol:rpn-3 "26S proteasome non-ATPase regulatory subunit
3" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000717 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0006915 GO:GO:0030234 GO:GO:0002119
GO:GO:0000003 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:FO080722 PIR:S44783
RefSeq:NP_498869.1 ProteinModelPortal:Q04908 DIP:DIP-25350N
IntAct:Q04908 MINT:MINT-211615 STRING:Q04908 PaxDb:Q04908
EnsemblMetazoa:C30C11.2.1 EnsemblMetazoa:C30C11.2.2 GeneID:176196
KEGG:cel:CELE_C30C11.2 UCSC:C30C11.2 CTD:176196 WormBase:C30C11.2
InParanoid:Q04908 NextBio:891536 Uniprot:Q04908
Length = 504
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 112/226 (49%), Positives = 150/226 (66%)
Query: 1 MSKITSENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLI 60
++ I + +RRT D +AAK ++ ++E L + FLN+RLR ATLRN E QAVLI
Sbjct: 160 LTSIYNFDRRTLDGLAAKTLYFLCVIYEREGRLFDHQGFLNSRLRTATLRNFSESQAVLI 219
Query: 61 NCLLRNYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQ 120
LLR YL Y A LV K AFP+NASNN+ AR+ +Y GRIKA++L+Y++A +Q
Sbjct: 220 CWLLRCYLINRQYQSAAHLVSKVAFPDNASNNDLARYMYYQGRIKALQLDYNSAAGYFLQ 279
Query: 121 ALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGE 180
A RKAPQ A+GF+Q QK VV+ LL G+IPDR +FRQ + R+ L+ Y L++ VR G+
Sbjct: 280 AQRKAPQEGAIGFKQAVQKWVVVIGLLQGEIPDRSVFRQPIYRKCLAHYLDLSRGVRDGD 339
Query: 181 LQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRI 226
+ +FN L + QF D T LI+RLR NVIKTAI+ I +YSRI
Sbjct: 340 VARFNHNLEQFKTQFEADDTLTLIVRLRQNVIKTAIKQISLAYSRI 385
>CGD|CAL0001433 [details] [associations]
symbol:RPN3 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 CGD:CAL0001433 GO:GO:0030234 EMBL:AACQ01000017
EMBL:AACQ01000015 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 eggNOG:NOG251646 KO:K03033 RefSeq:XP_721281.1
RefSeq:XP_721552.1 ProteinModelPortal:Q5AHZ8 STRING:Q5AHZ8
GeneID:3636917 GeneID:3637147 KEGG:cal:CaO19.10572
KEGG:cal:CaO19.3054 Uniprot:Q5AHZ8
Length = 481
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 109/223 (48%), Positives = 149/223 (66%)
Query: 6 SENRRTSDLIAAKCYFYHSRVHELTNNLDKVRSFLNARLRIATLRNDFEGQAVLINCLLR 65
S NRR+ D I AK +FY R EL +L +R L+ LR ATLR+D E A +I LLR
Sbjct: 148 SFNRRSLDFIQAKVWFYVCRAKELIGDLYSIRPELSYSLRTATLRHDIETTASVITLLLR 207
Query: 66 NYLHYNLYDQADKLVKKSAFPENASNNEWARFHFYLGRIKAVRLEYSTAHKNLVQALRKA 125
NYL + QA LV+K FPENA N AR+++YL RI A++L+YSTA++ ++ A+RKA
Sbjct: 208 NYLLTHDISQASDLVEKVEFPENAGNALVARYYYYLARINAIQLDYSTANECVITAIRKA 267
Query: 126 PQTA-AVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQAVRMGELQKF 184
PQT+ A GF Q KL++V+ELL+GDIP+ ++F+ L PYF +T+AVR+G+++ F
Sbjct: 268 PQTSLANGFVQAATKLSIVIELLMGDIPELKVFKNK--SGNLEPYFNVTKAVRLGDIKLF 325
Query: 185 NEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRIT 227
EVL + F+ D F L+ RLR NVIKT IR I SYS+I+
Sbjct: 326 GEVLHKFEADFKKDDNFTLVSRLRQNVIKTGIRIISLSYSKIS 368
>SGD|S000000823 [details] [associations]
symbol:RPN3 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IDA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
SGD:S000000823 GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 EMBL:BK006939 GO:GO:0008541 GO:GO:0006511 EMBL:U18778
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 PDB:4B4T PDBsum:4B4T
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 OMA:LKHDNET
GeneTree:ENSGT00490000043406 OrthoDB:EOG4350FR EMBL:D78023
PIR:S50479 RefSeq:NP_010938.1 ProteinModelPortal:P40016
DIP:DIP-1322N IntAct:P40016 MINT:MINT-401279 STRING:P40016
PaxDb:P40016 PeptideAtlas:P40016 EnsemblFungi:YER021W GeneID:856742
KEGG:sce:YER021W NextBio:982876 Genevestigator:P40016
GermOnline:YER021W Uniprot:P40016
Length = 523
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 90/232 (38%), Positives = 149/232 (64%)
Query: 8 NRRTSDLIAAKCYFYHSRVHE-LTNNLDKV---------RSFLNARLRIATLRNDFEGQA 57
N R+ +LI AK +FY HE L + +++ RS + L+IA+L++D E +A
Sbjct: 172 NLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHDNETKA 231
Query: 58 VLINCLLRNYLHYNLYDQADKLVKKSAFPE-NASNNEWARFHFYLGRIKAVRLEYSTAHK 116
+LIN +LR++L+ D A + K +P + S++ AR+ FYL +I A++L+YSTA++
Sbjct: 232 MLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANE 291
Query: 117 NLVQALRKAPQTA-AVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLTQA 175
++ A+RKAP + ++GF Q + KL ++LL+GDIP+ F Q+ ++++L PY+ LT+A
Sbjct: 292 YIIAAIRKAPHNSKSLGFLQQSNKLHCCIQLLMGDIPELSFFHQSNMQKSLLPYYHLTKA 351
Query: 176 VRMGELQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSIGASYSRIT 227
V++G+L+KF +T Y D T++L +RLR NVIKT IR I +Y +I+
Sbjct: 352 VKLGDLKKFTSTITKYKQLLLKDDTYQLCVRLRSNVIKTGIRIISLTYKKIS 403
>DICTYBASE|DDB_G0284241 [details] [associations]
symbol:DDB_G0284241 "proteasome component region PCI
(PINT) domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000717 Pfam:PF01399 dictyBase:DDB_G0284241
GenomeReviews:CM000153_GR EMBL:AAFI02000064 eggNOG:COG5600
InterPro:IPR013143 SMART:SM00753 OMA:YAFRNCP RefSeq:XP_638668.1
PRIDE:Q54PX7 EnsemblProtists:DDB0305019 GeneID:8624497
KEGG:ddi:DDB_G0284241 ProtClustDB:CLSZ2497181 Uniprot:Q54PX7
Length = 430
Score = 113 (44.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 36/166 (21%), Positives = 74/166 (44%)
Query: 59 LINCLLRNYLHYNLYDQADKLVK---KSAFP--ENASNNEWARFHFYLGRIKAVRLEYST 113
++N L + Y N L+K FP E+ N+ + F+ GR+ +Y
Sbjct: 202 VVNQLFQIYFKINNLKLCKNLIKTMESPGFPTLESYPLNQVITYRFFNGRLSVFNGQYKK 261
Query: 114 AHKNLVQALRKAPQTAAVGFRQTTQKLAVVVELLLGDIPDRQIFRQAVLRRALSPYFQLT 173
A + L+ A K P + R L V ++L P + + + L+ + +
Sbjct: 262 AQEELLYAFNKCPNDSIKNKRLILLFL-VPMQLEQCKFPKKSLLEKF----KLTQFIDIV 316
Query: 174 QAVRMGELQKFNEVLTTYGNQFRTDYTFKLILRLRHNVIKTAIRSI 219
Q+++ G +++FNE L+T+ N F + + ++ +L+ V + + +
Sbjct: 317 QSIKSGNIKQFNECLSTHQNFFISKGIYLILEKLKIIVYRNLFKKV 362
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 28 ELTNNLDKVRSFLN 41
ELTN+ +KV LN
Sbjct: 3 ELTNHFNKVNELLN 16
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.135 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 231 231 0.00084 113 3 11 22 0.47 32
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 596 (63 KB)
Total size of DFA: 168 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.70u 0.07s 20.77t Elapsed: 00:00:04
Total cpu time: 20.70u 0.07s 20.77t Elapsed: 00:00:04
Start: Thu Aug 15 16:24:05 2013 End: Thu Aug 15 16:24:09 2013