BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9819
(377 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7Z7M0|MEGF8_HUMAN Multiple epidermal growth factor-like domains protein 8 OS=Homo
sapiens GN=MEGF8 PE=1 SV=2
Length = 2845
Score = 214 bits (545), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 174/350 (49%), Gaps = 35/350 (10%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTC-VHGIG 79
C C +G C GPPD++C C+LGWT CS +C C+ HS C G G
Sbjct: 1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCSFHSHCRKRGPG 1177
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CDEC DWT G+HC+ CR GS+GNAT GCR C CN HG+ G CD+++G C CQD+T
Sbjct: 1178 FCDECQDWTWGEHCERCRPGSFGNATGSRGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1237
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE- 198
+G +C+ C PGYYGDP GG+C+ +C R +LT LGS G
Sbjct: 1238 EGAHCQLCSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRVGGLLPPGGGAARAGP 1297
Query: 199 ----CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
C+W++ + + AP + + L PD + PC + V +DG P F+ +
Sbjct: 1298 GLSYCVWVVSATEELQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDTGVVQ 1357
Query: 252 HQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCP 306
+ + FC + R V +A SG++ +H++ G S GFNA+ C P CP
Sbjct: 1358 SDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCP 1416
Query: 307 ENRTCINNQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLL 349
+ C+ C CP GP C+ +CP C+ GTC+ L
Sbjct: 1417 VPQECVPQDGAAGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGTCNQSL 1466
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 65/153 (42%), Gaps = 36/153 (23%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC---HDWTT 89
+C C+ G C PD+ C+C G+ G +CS C CN HS C G+G D C + T
Sbjct: 2222 VCAQGCVNGSCV-EPDH-CRCHFGFVGRNCSTECRCNRHSECA-GVGARDHCLLCRNHTK 2278
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCD-------------SITGECI-- 134
G HC+ C G+A CR C GNS + + S+ E I
Sbjct: 2279 GSHCEQCLPLFVGSAVGGGTCRPCHAFCRGNSHICISRKELQMSKGEPKKYSLDPEEIEN 2338
Query: 135 ---------------CQDNTQGKNCERCLPGYY 152
CQ+N+ G+ CE CL GY+
Sbjct: 2339 WVTEGPSEDEAVCVNCQNNSYGEKCESCLQGYF 2371
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 31/153 (20%)
Query: 199 CLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDG---LPDFVTSVGGTHQST 255
C W+I + +P ILL ++ C + +++YDG + S+ G+ +
Sbjct: 57 CEWLI------EAPSPQHRILLDFL-FLDTECTYDYLFVYDGDSPRGPLLASLSGSTRPP 109
Query: 256 TLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSE--GFNATYQIFSCPDKCPENRTC-I 312
+ EA SG M +H GFNA+++ CP C + C
Sbjct: 110 PI---------------EASSGKMLLHLFSDANYNLLGFNASFRFSLCPGGCQSHGQCQP 154
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C P GPDC + C C +HGTC
Sbjct: 155 PGVCACEPGWGGPDCGLQECSAYCG---SHGTC 184
Score = 35.4 bits (80), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 19/96 (19%)
Query: 3 IIFRISGLTTAKDDALSRCTVLL---------LYIFNASLCYNKC-----IYGYCKGPPD 48
++ +SG T S +LL L FNAS ++ C +G C+ P
Sbjct: 98 LLASLSGSTRPPPIEASSGKMLLHLFSDANYNLLGFNASFRFSLCPGGCQSHGQCQ--PP 155
Query: 49 YSCQCELGWTGVDCSV---NCLCNNHSTCVHGIGIC 81
C CE GW G DC + + C +H TC +G C
Sbjct: 156 GVCACEPGWGGPDCGLQECSAYCGSHGTCASPLGPC 191
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 24/100 (24%)
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE-CICQDN 138
+C C + + G+ C+ C G + C KC CN H ++ C+ G C CQ+N
Sbjct: 2350 VCVNCQNNSYGEKCESCLQGYF---LLDGKCTKCQCNGHADT----CNEQDGTGCPCQNN 2402
Query: 139 TQGKNCE----------------RCLPGYYGDPTDGGTCY 162
T+ C+ +C ++G P G CY
Sbjct: 2403 TETGTCQGSSPSDRRDCYKYQCAKCRESFHGSPLGGQQCY 2442
>sp|Q9QYP0|MEGF8_RAT Multiple epidermal growth factor-like domains protein 8 OS=Rattus
norvegicus GN=Megf8 PE=2 SV=2
Length = 2788
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 173/350 (49%), Gaps = 35/350 (10%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVH-GIG 79
C C +G C GPPD++C C+LGWT CS +C CN HS C G G
Sbjct: 1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCNFHSHCRRRGPG 1177
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CDEC DWT G+HC+ CR GS+GNAT GCR C CN HG+ G CD+++G C CQD+T
Sbjct: 1178 YCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1237
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPS--- 196
+G +C+ C PGYYGDP GG+C+ +C R +LT LGS G T
Sbjct: 1238 EGAHCQICSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRFGGLLPPGGGTARAGP 1297
Query: 197 --RECLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
C+W++ + AP + + L PD + PC + V +DG P F+ +
Sbjct: 1298 GLSYCVWVVSATEALQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDTGVVQ 1357
Query: 252 HQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCP 306
+ + FC + R V +A SG++ +H++ G S GFNA+ C P CP
Sbjct: 1358 SDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCP 1416
Query: 307 ENRTCINNQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLL 349
+ C+ C CP GP C+ +CP C+ G C+ L
Sbjct: 1417 VPQECVPQDGAAGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGICNQSL 1466
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 64/153 (41%), Gaps = 36/153 (23%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC---HDWTT 89
+C C+ G C PD+ C+C G+ G +CS C CN HS C G+G D C + T
Sbjct: 2165 VCAQGCVNGSCV-EPDH-CRCHFGFVGRNCSTECRCNRHSECA-GVGARDHCLLCRNHTK 2221
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCD-------------SITGECI-- 134
G HC+ C G+A CR C GNS + V S+ E I
Sbjct: 2222 GSHCEQCLPLFVGSALGGGTCRPCHAFCRGNSHVCVSRKELEMARREPEKYSLDPEEIEA 2281
Query: 135 ---------------CQDNTQGKNCERCLPGYY 152
CQ+N+ G CE CL GY+
Sbjct: 2282 WVAEGPSEDEAVCVNCQNNSYGDRCESCLHGYF 2314
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 31/157 (19%)
Query: 199 CLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDG---LPDFVTSVGGTHQST 255
C W+I + +P ILL ++ C + +++YDG + S+ G+ +
Sbjct: 57 CEWLI------EAPSPQHRILLDFL-FLDTECTYDYLFVYDGDSPQGPLLASLSGSTRPP 109
Query: 256 TLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSE--GFNATYQIFSCPDKCPENRTCIN 313
+ EA SG M +H GFNA+++ CP C + C +
Sbjct: 110 PI---------------EASSGKMLLHLFSDANYNLLGFNASFRFSLCPGGCQNHGQCKS 154
Query: 314 -NQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLL 349
CVC P GPDC + C C +HGTC L
Sbjct: 155 PGVCVCEPGWGGPDCGLQECSAYCG---SHGTCASTL 188
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 26 LYIFNASLCYNKCI-----YGYCKGPPDYSCQCELGWTGVDCSV---NCLCNNHSTCVHG 77
L FNAS ++ C +G CK P C CE GW G DC + + C +H TC
Sbjct: 130 LLGFNASFRFSLCPGGCQNHGQCKSP--GVCVCEPGWGGPDCGLQECSAYCGSHGTCAST 187
Query: 78 IGIC 81
+G C
Sbjct: 188 LGPC 191
Score = 35.0 bits (79), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 24/101 (23%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE-CICQD 137
+C C + + GD C+ C G + C KC CN H ++ C+ G C CQ+
Sbjct: 2292 AVCVNCQNNSYGDRCESCLHGYF---LLDGKCTKCQCNGHADT----CNEQDGTGCPCQN 2344
Query: 138 NT-----QGKN-----------CERCLPGYYGDPTDGGTCY 162
NT QG + C +C ++G P G CY
Sbjct: 2345 NTETGVCQGSSPSDRRDCYKYQCAKCRESFHGSPLGGQQCY 2385
>sp|P60882|MEGF8_MOUSE Multiple epidermal growth factor-like domains protein 8 OS=Mus
musculus GN=Megf8 PE=2 SV=2
Length = 2789
Score = 208 bits (530), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 171/350 (48%), Gaps = 35/350 (10%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVH-GIG 79
C C +G C GPPD++C C+LGWT CS +C C+ HS C G G
Sbjct: 1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCSFHSHCRRRGPG 1177
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CDEC DWT G+HC+ CR GS+GNAT GCR C CN HG+ G CD++TG C CQD+T
Sbjct: 1178 YCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLTGLCFCQDHT 1237
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE- 198
+G +C+ C PGYYGDP GG+C+ +C R +LT LGS G
Sbjct: 1238 EGAHCQICSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRFGGLLPPGGGAARAGP 1297
Query: 199 ----CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
C+W++ + P + + L PD + PC + V +DG P F+ +
Sbjct: 1298 GLSYCVWVVSATEALQPCVPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDTGVVQ 1357
Query: 252 HQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCP 306
+ + FC + R V +A SG++ +H++ G S GFNA+ C P CP
Sbjct: 1358 SDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCP 1416
Query: 307 ENRTCINNQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLL 349
+ C+ C CP GP C+ +CP C+ G C+ L
Sbjct: 1417 VPQECVPQDGAAGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGICNQSL 1466
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 64/153 (41%), Gaps = 36/153 (23%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC---HDWTT 89
+C C+ G C PD+ C+C G+ G +CS C CN HS C G+G D C + T
Sbjct: 2166 VCAQGCVNGSCV-EPDH-CRCHFGFVGRNCSTECRCNRHSECA-GVGAQDHCLLCRNHTK 2222
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCD-------------SITGECI-- 134
G HC+ C G+A CR C GNS + V S+ E I
Sbjct: 2223 GSHCEQCLPLFVGSALGGGTCRPCHAFCRGNSHVCVSRKELEMARKEPEKYSLDPEEIET 2282
Query: 135 ---------------CQDNTQGKNCERCLPGYY 152
CQ+N+ G CE CL GY+
Sbjct: 2283 WVAEGPSEDEAVCVNCQNNSYGDRCESCLHGYF 2315
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 31/157 (19%)
Query: 199 CLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDG---LPDFVTSVGGTHQST 255
C W+I + +P ILL ++ C + +++YDG + S+ G+ +
Sbjct: 57 CEWLI------EAPSPQHRILLDFL-FLDTECTYDYLFVYDGDSPQGPLLASLSGSTRPP 109
Query: 256 TLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSE--GFNATYQIFSCPDKCPENRTCIN 313
+ EA SG M +H GFNA+++ CP C + C +
Sbjct: 110 PI---------------EASSGKMLLHLFSDANYNLLGFNASFRFSLCPGGCQNHGQCKS 154
Query: 314 -NQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLL 349
CVC P GPDC + C C +HGTC L
Sbjct: 155 PGVCVCEPGWGGPDCGLQECSAYCG---SHGTCASTL 188
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 26 LYIFNASLCYNKCI-----YGYCKGPPDYSCQCELGWTGVDCSV---NCLCNNHSTCVHG 77
L FNAS ++ C +G CK P C CE GW G DC + + C +H TC
Sbjct: 130 LLGFNASFRFSLCPGGCQNHGQCKSP--GVCVCEPGWGGPDCGLQECSAYCGSHGTCAST 187
Query: 78 IGIC 81
+G C
Sbjct: 188 LGPC 191
Score = 35.4 bits (80), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 24/101 (23%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE-CICQD 137
+C C + + GD C+ C G + C KC CN H ++ C+ G C CQ+
Sbjct: 2293 AVCVNCQNNSYGDRCESCLHGYF---LLDGKCTKCQCNGHADT----CNEQDGTGCPCQN 2345
Query: 138 NTQGKNCE----------------RCLPGYYGDPTDGGTCY 162
NT+ C+ +C ++G P G CY
Sbjct: 2346 NTETGTCQGSSPSDRRDCYKYQCAKCRESFHGSPLGGQQCY 2386
>sp|Q16363|LAMA4_HUMAN Laminin subunit alpha-4 OS=Homo sapiens GN=LAMA4 PE=1 SV=4
Length = 1823
Score = 80.9 bits (198), Expect = 1e-14, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 81/187 (43%), Gaps = 30/187 (16%)
Query: 37 KCIYGYC----KGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIG----ICDECHDWT 88
KC+ GY +G P + C C + L N +C G IC+E +
Sbjct: 112 KCLDGYIGDSIRGAPQFCQPCP-------CPLPHLANFAESCYRKNGAVRCICNENY--- 161
Query: 89 TGDHCQYCRAGSYGNAT-TQEGCRKCDC--NSHGNSVLGVCDSITGECI-CQDNTQGKNC 144
G +C+ C G YGN C+KCDC NS N + CD +TG+C C NT G C
Sbjct: 162 AGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKC 221
Query: 145 ERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAER-NAWEGKDTPS---RECL 200
ERC PGYYGD C C G GP G L E G D P+ +C+
Sbjct: 222 ERCAPGYYGDARIAKNCAV-CNCGG---GPCDSVTGECLEEGFEPPTGMDCPTISCDKCV 277
Query: 201 WIIGQSL 207
W + +L
Sbjct: 278 WDLTDAL 284
Score = 79.0 bits (193), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 64 VNCLCN-NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCN-SHG 119
V C CN N + C+ G G C C TTG+HC+ C G G++ + C+ C C H
Sbjct: 80 VPCDCNGNSNECLDGSGYCVHCQRNTTGEHCEKCLDGYIGDSIRGAPQFCQPCPCPLPHL 139
Query: 120 NSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
+ C G CIC +N G NCERC PGYYG+P G+ +C G
Sbjct: 140 ANFAESCYRKNGAVRCICNENYAGPNCERCAPGYYGNPLLIGSTCKKCDCSG 191
Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYY 152
+ C AG + + + C CDCN + N C +G C+ CQ NT G++CE+CL GY
Sbjct: 65 EKCNAGFFHTLSGE--CVPCDCNGNSNE----CLDGSGYCVHCQRNTTGEHCEKCLDGYI 118
Query: 153 GDPTDGGTCYYQ 164
GD G + Q
Sbjct: 119 GDSIRGAPQFCQ 130
>sp|P97927|LAMA4_MOUSE Laminin subunit alpha-4 OS=Mus musculus GN=Lama4 PE=1 SV=2
Length = 1816
Score = 79.7 bits (195), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 79/185 (42%), Gaps = 33/185 (17%)
Query: 37 KCIYGYC----KGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIG----ICDECHDWT 88
KC+ GY +G P + C C + L N +C G IC E +
Sbjct: 112 KCLDGYIGDSIRGTPRFCQPCP-------CPLPHLANFAESCYRKNGAVRCICKENY--- 161
Query: 89 TGDHCQYCRAGSYGNAT-TQEGCRKCDC--NSHGNSVLGVCDSITGECI-CQDNTQGKNC 144
G +C+ C G YGN C+KCDC NS N + CD ITG+C C NT G C
Sbjct: 162 VGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEITGQCRNCLRNTTGFKC 221
Query: 145 ERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPS--RECLWI 202
ERC PGYYGD C C G GP G L EG + P+ +C+W
Sbjct: 222 ERCAPGYYGDARTAKNCAV-CNCGG---GPCDSVTGECLE-----EGFEVPTGCDKCVWD 272
Query: 203 IGQSL 207
+ L
Sbjct: 273 LTDDL 277
Score = 79.0 bits (193), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 66 CLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCN-SHGNS 121
C CN +S C+ G G C C TTG+HC+ C G G++ T C+ C C H +
Sbjct: 82 CDCNGNSHECLDGSGFCLHCQRNTTGEHCEKCLDGYIGDSIRGTPRFCQPCPCPLPHLAN 141
Query: 122 VLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
C G CIC++N G NCERC PGYYG+P G+ +C G
Sbjct: 142 FAESCYRKNGAVRCICKENYVGPNCERCAPGYYGNPLLIGSTCKKCDCSG 191
Score = 48.9 bits (115), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYY 152
+ C AG + + + C CDCN + + C +G C+ CQ NT G++CE+CL GY
Sbjct: 65 ERCDAGFFRTLSGE--CAPCDCNGNSHE----CLDGSGFCLHCQRNTTGEHCEKCLDGYI 118
Query: 153 GDPTDG 158
GD G
Sbjct: 119 GDSIRG 124
>sp|Q19981|TAG53_CAEEL Putative protein tag-53 OS=Caenorhabditis elegans GN=tag-53 PE=1 SV=3
Length = 1329
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIG--------ICDECHDWTT 89
CI G GP + + W +DC C CN HSTC +G C C + TT
Sbjct: 919 CIRGTSTGPLEPKPE-NSTWYFIDCPA-CQCNGHSTCFTSVGSFPPVTIEKCQSCQNHTT 976
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN-TQGKNCERCL 148
G HC+ C G YG+A C CDC+ + +CD ++G+C C+ G C++C
Sbjct: 977 GAHCERCAPGFYGDARNGGVCSPCDCHHQAD----MCDPVSGQCFCKTKGVTGDRCDKCE 1032
Query: 149 PGYYGDPTDGGTCYYQCMARGMLT 172
Y G+P +G C+Y+ + T
Sbjct: 1033 AKYVGNPRNGTPCFYELAVDFIFT 1056
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 29/170 (17%)
Query: 194 TPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQ 253
+PS +C W+I NS P I + + C + +YIYDG SV G
Sbjct: 115 SPSAKCTWLIEPE---NSATPLKIRINSFFTE----CGWDYLYIYDG-----DSVYGKQ- 161
Query: 254 STTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSE--GFNATYQIFSCPDKCPENRTC 311
L C E + + A SG +H+ GFN +Y+ C C + +C
Sbjct: 162 ---LAALCGEQPSQEFT---AASGKALVHFFSDLAINLNGFNVSYESNRCAYNCSNHGSC 215
Query: 312 INNQCVCPPRRTGPDCQEEIC-------PNECHEFL-NHGTCDLLLTGVH 353
+N +C C G +C+ ++C + CHE G C+ L VH
Sbjct: 216 LNGKCDCEDGYKGLNCEYQVCQLSGKSTESPCHEGQCVDGRCECLSARVH 265
>sp|Q61789|LAMA3_MOUSE Laminin subunit alpha-3 OS=Mus musculus GN=Lama3 PE=1 SV=3
Length = 3333
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 43 CKGPPDY---SCQ-CELGWTGVDCS------VNCLCNNHST-CVHGIGICDECHDWTTGD 91
C PPDY SCQ C G+ + S V C CN HS C G GIC C T G+
Sbjct: 1654 CACPPDYTGDSCQGCRPGYYWDNKSLPVGRCVPCNCNGHSNRCQDGSGICINCQHNTAGE 1713
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC--DSITGECICQDNTQGKNCERCLP 149
HC+ C+AG YGNA CR C C H NS C D C C+ G CERC P
Sbjct: 1714 HCERCQAGHYGNA-IHGSCRVCPC-PHTNSFATGCAVDGGAVRCACKPGYTGTQCERCAP 1771
Query: 150 GYYGDPTD-GGTC 161
GY+G+P GG+C
Sbjct: 1772 GYFGNPQKFGGSC 1784
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
Query: 66 CLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHG 119
C C+ T + CD C TG C C G C C CN G
Sbjct: 1354 CNCSRKGTIEAAVSECDRDSGQCRCKPRVTGQQCDKCAPGLL---PVPLKCVPCSCNRDG 1410
Query: 120 NSVLGVCDSITGECICQDNTQGKNCERCLPG-YYGDPTDGGTC 161
VCD TG C+C++N +G C+ C G +Y DPT+ C
Sbjct: 1411 TEP-SVCDPETGACMCKENVEGPQCQLCREGSFYLDPTNPKGC 1452
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 80 ICDE-----CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
ICD+ C G C CR+GSY C+ C C++ G+ + CD G+C
Sbjct: 499 ICDDRGRCLCRPGVEGPQCDSCRSGSYSFPI----CQACQCSTIGSYPVP-CDPGNGQCD 553
Query: 135 CQDNTQGKNCERCLPGYYGDP 155
C G+ C+RCL G Y P
Sbjct: 554 CLPGITGRQCDRCLSGAYDFP 574
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 66 CLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSH 118
C C+ T + GIG C + C TGD C C G + + GC+ C C+
Sbjct: 628 CQCHEAGT-LSGIGECGQEDGDCSCKAHVTGDACDTCEDGFFSLEKSNYFGCQGCQCDI- 685
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
G ++ +C +G C C+++ +GK C+R YY
Sbjct: 686 GGALTTMCSGPSGVCQCREHVEGKQCQRPENNYY 719
Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYGN----ATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
G G+C C T G +C+ C G + GC C C+ CD +G
Sbjct: 383 GGGVCINCQHNTAGVNCEKCAKGYFRPHGVPVDALHGCIPCSCDPERADD---CDQGSGH 439
Query: 133 CICQDNTQGKNCERCLPGYYGDP 155
C C+ N G CE C GYY P
Sbjct: 440 CHCKPNFSGDYCETCADGYYNFP 462
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 71/190 (37%), Gaps = 34/190 (17%)
Query: 3 IIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKC--IYGY--CKGPPDYSCQCELGWT 58
++ I+G AK A S N L + + + G+ K D + ++
Sbjct: 227 VVSLINGRPGAKKFAFSDTLREFTKATNIRLRFLRTNTLLGHLISKAERDPTVTRRYYYS 286
Query: 59 GVDCSV--NCLCNNHSTCVHGIGICD----ECHDWTTGDHCQYCRAG---SYGNATTQEG 109
D SV C+CN H+ EC T GD C C AG QE
Sbjct: 287 IKDISVGGRCVCNGHAEACSADNPEKQFRCECQHHTCGDTCNRCCAGYNQRRWQPAGQEQ 346
Query: 110 CRKCD-CNSHGNSVLGVCDSIT----------------GECI-CQDNTQGKNCERCLPGY 151
+C+ CN HG++V D G CI CQ NT G NCE+C GY
Sbjct: 347 HNECEACNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGY 406
Query: 152 Y---GDPTDG 158
+ G P D
Sbjct: 407 FRPHGVPVDA 416
>sp|Q9WU60|ATRN_MOUSE Attractin OS=Mus musculus GN=Atrn PE=2 SV=3
Length = 1428
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 37 KCIYGYCKGPPDYSCQCELG--------------------WTGVDCSVNCLCNNHSTCVH 76
KCI G KGP Q G W+ + C C CN HS C++
Sbjct: 1014 KCIEGSYKGPVKMPSQASAGNVYPQPLLNSSMCLEDSRYNWSFIHCPA-CQCNGHSKCIN 1072
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
IC++C D TTG HC+ C +G YG+ T C+ C CN H + +C++ TG+C C
Sbjct: 1073 Q-SICEKCEDLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHAS----LCNTNTGKCFCT 1127
Query: 137 DN-TQGKNCERCLP--GYYGDPTDGGTCYYQCMARGMLT 172
+G C+ C Y G+P GTCYY + T
Sbjct: 1128 TKGVKGDECQLCEVENRYQGNPLK-GTCYYTLLIDYQFT 1165
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 82/233 (35%), Gaps = 51/233 (21%)
Query: 124 GVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGL 183
G C+ TG+C+C G+ C+ C GG R LTG SG
Sbjct: 108 GRCNPGTGQCVCPTGWVGEQCQHC----------GG--------RFRLTG------SSGF 143
Query: 184 AERNAWEGKDTPSRECLWII-GQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLP 242
G +C W+I GQ P I+ LR C+ + +Y+YDG
Sbjct: 144 VTDGP--GNYKYKTKCTWLIEGQ--------PNRIMRLRFN-HFATECSWDHLYVYDGDS 192
Query: 243 DFVTSVGGTHQSTTLGVFCTE-DMHRGYEVLEAKSGVMTIHYKQGKPSE--GFNATYQIF 299
+ + G+ E D + + SG +H+ GFN TY
Sbjct: 193 IYAPLIAAFS-----GLIVPERDGNETAPEVTVTSGYALLHFFSDAAYNLTGFNITYNFD 247
Query: 300 SCPDKCPENRTCINN------QCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP+ C C ++ +C C G C C + C F + G C+
Sbjct: 248 MCPNNCSGRGECKSSNSSSAVECECSENWKGESCDIPHCTDNC-GFPHRGICN 299
>sp|Q99J86|ATRN_RAT Attractin OS=Rattus norvegicus GN=Atrn PE=2 SV=1
Length = 1432
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 37 KCIYGYCKGPPDYSCQCELG--------------------WTGVDCSVNCLCNNHSTCVH 76
KCI G KGP G W+ + C C CN HS C++
Sbjct: 1018 KCIEGSYKGPVKMPSHASTGNVYPQPLLNSSMCLEDSRYNWSFIHCPA-CQCNGHSKCIN 1076
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
IC++C D TTG HC+ C +G YG+ T C+ C CN H + +C++ TG+C C
Sbjct: 1077 Q-SICEKCEDLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHAS----LCNTNTGKCFCT 1131
Query: 137 DN-TQGKNCERCLP--GYYGDPTDGGTCYYQCMARGMLT 172
+G+ C+ C Y G+P GTCYY + T
Sbjct: 1132 TKGVKGEECQLCEVENRYQGNPLK-GTCYYTLLIDYQFT 1169
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 82/233 (35%), Gaps = 51/233 (21%)
Query: 124 GVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGL 183
G C+ TG+C+C G+ C+ C GG R LTG SG
Sbjct: 112 GRCNPGTGQCVCPTGWVGEQCQHC----------GG--------RFRLTG------SSGF 147
Query: 184 AERNAWEGKDTPSRECLWII-GQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLP 242
G +C W+I GQ P I+ LR C+ + +Y+YDG
Sbjct: 148 VTDGP--GNYKYKTKCTWLIEGQ--------PNKIMRLRFN-HFATECSWDHLYVYDGDS 196
Query: 243 DFVTSVGGTHQSTTLGVFCTE-DMHRGYEVLEAKSGVMTIHYKQGKPSE--GFNATYQIF 299
+ + G+ E D + + SG +H+ GFN TY
Sbjct: 197 IYAPLIAAFS-----GLIVPERDGNETAPEVTVTSGYALLHFFSDAAYNLTGFNITYNFD 251
Query: 300 SCPDKCPENRTCINN------QCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP+ C C ++ +C C G C C + C F + G C+
Sbjct: 252 MCPNNCSGRGECKSSNSSSTVECECSENWKGESCDIPHCTDNC-GFPHRGICN 303
>sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2
Length = 3333
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 64 VNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV 122
V C CN HS C G GIC C T G+HC+ C+ G YGNA CR C C H NS
Sbjct: 1685 VPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNA-VHGSCRACPC-PHTNSF 1742
Query: 123 LGVCDSITGE--CICQDNTQGKNCERCLPGYYGDPTD-GGTC 161
C G+ C C+ G CERC PGY+G+P GG+C
Sbjct: 1743 ATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFGGSC 1784
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYGN----ATTQEGCRKCDCN-SHGNSVLGVCDSITG 131
G G+C C T G +C+ C G Y +GC C C+ H + C+ +G
Sbjct: 386 GGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDPEHADG----CEQGSG 441
Query: 132 ECICQDNTQGKNCERCLPGYYGDP 155
C C+ N G NCE+C GYY P
Sbjct: 442 RCHCKPNFHGDNCEKCAIGYYNFP 465
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 66 CLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHG 119
C C+ T + CD C TG C C +G Y C C+CN G
Sbjct: 1356 CNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCASGFYRFPE----CVPCNCNRDG 1411
Query: 120 NSVLGVCDSITGECICQDNTQGKNCERCLPG-YYGDPTDGGTC 161
GVCD TG C+C++N +G C C G ++ DP + C
Sbjct: 1412 TEP-GVCDPGTGACLCKENVEGTECNVCREGSFHLDPANLKGC 1453
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 67 LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC 126
+C+ H C+ C G C CR+G Y C+ C C++ G+ + C
Sbjct: 502 ICDAHGRCL--------CRPGVEGPRCDTCRSGFYSFPI----CQACWCSALGSYQMP-C 548
Query: 127 DSITGECICQDNTQGKNCERCLPGYYGDP 155
S+TG+C C+ G+ C+RCL G Y P
Sbjct: 549 SSVTGQCECRPGVTGQRCDRCLSGAYDFP 577
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C TG C+ C G +GN G C+ C CNS+G LG C +TG+CI Q+
Sbjct: 1757 CKAGYTGTQCERCAPGYFGNPQKFGGSCQPCSCNSNGQ--LGSCHPLTGDCINQEPKDSS 1814
Query: 143 NCERC 147
E C
Sbjct: 1815 PAEEC 1819
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 26/126 (20%)
Query: 51 CQCELGWTGVDCS-----------------VNCLCNNHSTCVHGIGICDE------CHDW 87
CQC+L G CS C C+ T V G G C + C
Sbjct: 599 CQCKLHVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGT-VSGTGECRQGDGDCHCKSH 657
Query: 88 TTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
GD C C G + + GC+ C C+ G ++ +C +G C C+++ GK C+R
Sbjct: 658 VGGDSCDTCEDGYFALEKSNYFGCQGCQCDI-GGALSSMCSGPSGVCQCREHVVGKVCQR 716
Query: 147 CLPGYY 152
YY
Sbjct: 717 PENNYY 722
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 104 ATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
A +G C+C+ G + C G+C CQ N G+ C RC G+YG P
Sbjct: 1257 AFYHKGALPCECHPTG-ATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYGFP 1307
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 19/120 (15%)
Query: 51 CQCELGWTGVDCSVNCL---------------CNNHSTCVHGIGICDECHDWTTGDHCQY 95
C+C G TG C CL C+ T +G C +C G C
Sbjct: 555 CECRPGVTGQRCD-RCLSGAYDFPHCQGSSSACDPAGTINSNLGYC-QCKLHVEGPTCSR 612
Query: 96 CRAGSYG-NATTQEGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C+ + + GC +C C+ G S G C G+C C+ + G +C+ C GY+
Sbjct: 613 CKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCEDGYFA 672
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
EC TG C C +G+Y Q CD NS LG C C+ + +G
Sbjct: 556 ECRPGVTGQRCDRCLSGAYDFPHCQGSSSACDPAGTINSNLGYCQ-------CKLHVEGP 608
Query: 143 NCERCLPGYYG-DPTDGGTCYY-QCMARGMLTGPG 175
C RC Y+ D + C +C G ++G G
Sbjct: 609 TCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTG 643
>sp|O75882|ATRN_HUMAN Attractin OS=Homo sapiens GN=ATRN PE=1 SV=2
Length = 1429
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 37 KCIYGYCKGPPDYSCQCELG--------------------WTGVDCSVNCLCNNHSTCVH 76
KCI G KGP Q G W+ + C C CN HS C++
Sbjct: 1015 KCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPA-CQCNGHSKCIN 1073
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
IC++C + TTG HC+ C +G YG+ T C+ C CN H + +C++ TG+C C
Sbjct: 1074 Q-SICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHAS----LCNTNTGKCFCT 1128
Query: 137 DN-TQGKNCERCLP--GYYGDPTDGGTCYYQCMARGMLT 172
+G C+ C Y G+P GTCYY + T
Sbjct: 1129 TKGVKGDECQLCEVENRYQGNPLR-GTCYYTLLIDYQFT 1166
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 84/233 (36%), Gaps = 51/233 (21%)
Query: 124 GVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGL 183
G C+ TG+C+C G+ C+ C GG R LTG SG
Sbjct: 109 GRCNPGTGQCVCPAGWVGEQCQHC----------GG--------RFRLTG------SSGF 144
Query: 184 AERNAWEGKDTPSRECLWII-GQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLP 242
G +C W+I GQ P I+ LR C+ + +Y+YDG
Sbjct: 145 VTDGP--GNYKYKTKCTWLIEGQ--------PNRIMRLRFN-HFATECSWDHLYVYDGDS 193
Query: 243 DFVTSVGGTHQSTTLGVFCTE-DMHRGYEVLEAKSGVMTIHYKQGKPSE--GFNATYQIF 299
+ V G+ E D + + A SG +H+ GFN TY
Sbjct: 194 IYAPLVAAFS-----GLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFD 248
Query: 300 SCPDKCPENRTC-INN-----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP+ C C I+N +C C G C C + C F + G C+
Sbjct: 249 MCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNC-GFPHRGICN 300
>sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2
Length = 1786
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
+ C GY P + C+ C N + C G C +C T G+HCQ+
Sbjct: 956 DDCASGYFGNPSEVGGSCQ----PCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQF 1011
Query: 96 CRAGSYGNATTQEGCRKCDCN------SHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
CR G YG+A Q+ CRKC CN H N CD TG+C+C N G+NC+RC P
Sbjct: 1012 CRFGYYGDA-LQQDCRKCVCNYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAP 1070
Query: 150 GYY 152
+
Sbjct: 1071 NTW 1073
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 63 SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV 122
SVN CN + H C C C G +G + C+ C CN H +
Sbjct: 828 SVNAFCNPVTGQCH-------CFQGVYARQCDRCLPGHWGFPS----CQPCQCNGHADD- 875
Query: 123 LGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGG 159
CD +TGEC+ CQD T G NCERCL GYYGDP G
Sbjct: 876 ---CDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGS 910
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 66 CLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG--CRKCDCNS---HG 119
C CN H+ C G C C D+T G +C+ C AG YG+ G CR C C G
Sbjct: 867 CQCNGHADDCDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPDSG 926
Query: 120 NSVLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGDPTD-GGTC 161
C D +T + C+C G C+ C GY+G+P++ GG+C
Sbjct: 927 RQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGYFGNPSEVGGSC 973
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 65 NCLCNNHSTCVH------------GIGICDECHDWTTGDHCQYCRAGSYGNATTQ----E 108
C CN HS H G+CD+C T G +C+ C+ Y +
Sbjct: 334 KCNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPN 393
Query: 109 GCRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYY 152
C +C C+ G+ G+CDS I G+C C+ N +G++C+ C G+Y
Sbjct: 394 FCERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFY 445
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
Query: 79 GICDECHDWTTG--------------DHCQYCRAGSYGNATTQE-GCRKCDCNSHGNSVL 123
GICD D++TG +HC C+ G Y ++ GC+ C CN G
Sbjct: 409 GICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGTIPG 468
Query: 124 G-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G CDS TG C C+ G++C++CLP ++G D C
Sbjct: 469 GNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGC 507
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 65/165 (39%), Gaps = 36/165 (21%)
Query: 41 GYCKGPPDYS-------CQCELGWTGVDCSV-----------------NCLCNNHSTCVH 76
G C D+S C+C+L G C V +C CN T +
Sbjct: 409 GICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGT-IP 467
Query: 77 GIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSIT 130
G CD C TG HC C +G + +GCR CDC+ G ++ C + +
Sbjct: 468 GGNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCD-LGGALNNSCFAES 526
Query: 131 GECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPG 175
G+C C+ + G+ C PGYY D +Y A GPG
Sbjct: 527 GQCSCRPHMIGRQCNEVEPGYYFATLD----HYLYEAEEANLGPG 567
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 77/198 (38%), Gaps = 32/198 (16%)
Query: 58 TGVD-CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
TG D C+ N + +C G C +C G C C+ +G+ + CR CDC+
Sbjct: 1079 TGCDPCNCNAAHSFGPSCNEFTGQC-QCMPGFGGRTCSECQELFWGDPDVE--CRACDCD 1135
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMAR-----GML 171
G CD TG+C+C + +G C++C GY G D C +QC A L
Sbjct: 1136 PRGIET-PQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPDCTPC-HQCFALWDVIIAEL 1193
Query: 172 TGPGPQGLGSGLA-----------------ERNAWEGKD----TPSRECLWIIGQSLDSN 210
T + L A ER E KD +P+ E L IG +
Sbjct: 1194 TNRTHRFLEKAKALKISGVIGPYRETVDSVERKVSEIKDILAQSPAAEPLKNIGNLFEEA 1253
Query: 211 STAPADIILLRLQPDINV 228
D+ + Q ++ +
Sbjct: 1254 EKLIKDVTEMMAQVEVKL 1271
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 46/122 (37%), Gaps = 37/122 (30%)
Query: 65 NCLCNNH-STCVHGIGICDE----------CHDWTTGDHCQYCRAGSY------GNATTQ 107
NC C H S C G +E C T G +C+ C +
Sbjct: 270 NCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNS 329
Query: 108 EGCRKCDCNSH--------------GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C+KC+CN H GN GVCD CQ NT G+NCE+C P YY
Sbjct: 330 NACKKCNCNEHSISCHFDMAVYLATGNVSGGVCDD------CQHNTMGRNCEQCKPFYYQ 383
Query: 154 DP 155
P
Sbjct: 384 HP 385
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 90 GDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSV-LGVCDSITGECI-CQDNTQGKNCER 146
G C C +G +GN + G C+ C C+++ ++ CD TG C+ C +T+G++C+
Sbjct: 952 GSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQF 1011
Query: 147 CLPGYYGD 154
C GYYGD
Sbjct: 1012 CRFGYYGD 1019
Score = 38.5 bits (88), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 113 CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C+C+ G S+ VCD G+C C+ N G+ C RC PG +G
Sbjct: 773 CECDPQG-SLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFG 812
>sp|Q13751|LAMB3_HUMAN Laminin subunit beta-3 OS=Homo sapiens GN=LAMB3 PE=1 SV=1
Length = 1172
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 65 NCLCNNHSTCVHGI------------GICDECHDWTTGDHCQYCRAGSYGN----ATTQE 108
C CN HS H G+CD C D T G +C+ C+ + N A+ QE
Sbjct: 315 RCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQE 374
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C C+C+ G CD +TG+C+C+++ QG+ C+ C PG+ G
Sbjct: 375 TCISCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTG 419
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 84 CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C + G+ C C+ G G +GC +CDCN G+ CD +G C+C N G
Sbjct: 401 CKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDMPCDEESGRCLCLPNVVGP 460
Query: 143 NCERCLPGYY 152
C++C P ++
Sbjct: 461 KCDQCAPYHW 470
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 29/117 (24%)
Query: 72 STCVHGIGICDECHDWTTGDHCQYCRAGSYGN-----ATTQEG--CRKCDCNSHGN---- 120
ST V +C C T G +C+ C A Y N A Q+ C++CDCN H
Sbjct: 270 STAVQVHDVC-VCQHNTAGPNCERC-APFYNNRPWRPAEGQDAHECQRCDCNGHSETCHF 327
Query: 121 ----------SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMA 167
+ GVCD+ C+D+T+GKNCERC Y+ + G + C++
Sbjct: 328 DPAVFAASQGAYGGVCDN------CRDHTEGKNCERCQLHYFRNRRPGASIQETCIS 378
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
+ C +YG+ T GCR CDC+ G G CD +G C+C+ G C++C GY
Sbjct: 517 RQCPDRTYGDVAT--GCRACDCDFRGTEGPG-CDKASGRCLCRPGLTGPRCDQCQRGY 571
>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus GN=Lama1 PE=1 SV=1
Length = 3084
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
G C +C T G HC+ C G YG+A T + CR CDC+ +G S+ GVC TG C C+ +
Sbjct: 875 GECLKCLWNTDGAHCERCADGFYGDAVTAKNCRACDCHENG-SLSGVCHLETGLCDCKPH 933
Query: 139 TQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLT 172
G+ C++CL GYYG T G C G ++
Sbjct: 934 VTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVS 967
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNS 121
V C CNNHS C G C C D T+GDHC+ C +G YG T G C C C H
Sbjct: 1408 VPCNCNNHSDVCDPETGKCLSCRDHTSGDHCELCASGYYGKVTGLPGDCTPCTCPHHPPF 1467
Query: 122 VLGVCDSITGEC-----ICQDNTQGKNCERCLPGYYGDP-TDGGTC 161
+ G+ C +G+ CERC GY+G+P GG+C
Sbjct: 1468 SFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSC 1513
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 59/138 (42%), Gaps = 27/138 (19%)
Query: 51 CQCELGWTGVDCSV------------------NCLCNNHSTCVHGIGICDECHDWTTGDH 92
C+C G+TG C C C+ H++ GIC C TTGDH
Sbjct: 716 CECPQGYTGTSCEACLPGYYRVDGILFGGICQPCECHGHASECDIHGICSVCTHNTTGDH 775
Query: 93 CQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSITGECI----CQDNTQGKNC 144
C+ C G YG + T C+ C C + N+ C GE + C G C
Sbjct: 776 CEQCLPGFYGTPSRGTPGDCQPCACPLSIDSNNFSPTCHLTDGEEVVCDQCAPGYSGSWC 835
Query: 145 ERCLPGYYGDPT-DGGTC 161
ERC GYYG+PT GGTC
Sbjct: 836 ERCADGYYGNPTVPGGTC 853
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C+ C G +C+ C AG +GN G C+ CDCN G SV CD +G+C+C+
Sbjct: 1483 CNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQG-SVHSDCDRASGQCVCKPGA 1541
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCM 166
G +CE+CLP + +D +C C+
Sbjct: 1542 TGLHCEKCLPRHILMESDCVSCDDDCV 1568
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 20/117 (17%)
Query: 52 QCELGWTGVDCSVNCL-CNNHSTCVHGIGICDECHDW--------TTGDHCQYCRAGSYG 102
QC G+ G+D + C+ CN C + D C + +G C C G Y
Sbjct: 941 QCLSGYYGLDTGLGCVPCN----CSVEGSVSDNCTEEGQCHCGPGVSGKQCDRCSHGFY- 995
Query: 103 NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDG 158
A GC CDC N+ CD +GEC+C +TQG CE C Y+G DP G
Sbjct: 996 -AFQDGGCTPCDCAHTQNN----CDPASGECLCPPHTQGLKCEECEEAYWGLDPEQG 1047
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG----------CRKCDCNSHGNSVLGVCDSITGEC 133
C T G CQ C G Y + G C C+CN+H + VCD TG+C
Sbjct: 1371 CPPGTAGHSCQDCAPGYYREKLPESGGRGPRPLLAPCVPCNCNNHSD----VCDPETGKC 1426
Query: 134 I-CQDNTQGKNCERCLPGYYGDPT 156
+ C+D+T G +CE C GYYG T
Sbjct: 1427 LSCRDHTSGDHCELCASGYYGKVT 1450
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C GD C C+ G G C CDC + G+ C C+C+ N +GKN
Sbjct: 436 CRKGYAGDKCDRCQFGYRGFPN----CIPCDCRTVGSLNEDPC---IEPCLCKKNVEGKN 488
Query: 144 CERCLPGYY 152
C+RC PG+Y
Sbjct: 489 CDRCKPGFY 497
Score = 39.7 bits (91), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 74 CVHGIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCD 127
C H CD C T G C+ C +G ++GC+ C+C++ G S CD
Sbjct: 1007 CAHTQNNCDPASGECLCPPHTQGLKCEECEEAYWG-LDPEQGCQACNCSAVG-STSAQCD 1064
Query: 128 SITGECICQDNTQGKNCERCLPGYYGDP 155
++G C C+ G++C +C GY P
Sbjct: 1065 VLSGHCPCKKGFGGQSCHQCSLGYRSFP 1092
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 16/94 (17%)
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYG----NATTQEGCRKCDCNSHGNSVLGVC------ 126
G G+C C TTG +C+ C Y + CR C+C+ G S+ VC
Sbjct: 364 GGGVCVNCSQNTTGINCETCIDQYYRPHKVSPYDDHPCRPCNCDPVG-SLSSVCIKDDRH 422
Query: 127 -----DSITGECICQDNTQGKNCERCLPGYYGDP 155
G+C C+ G C+RC GY G P
Sbjct: 423 ADLANGKWPGQCPCRKGYAGDKCDRCQFGYRGFP 456
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 113 CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGT 160
C C H +S ++ +C C+ NT G++C+RC PGY+ P GT
Sbjct: 277 CICYGHASSCPWDEEAKQLQCQCEHNTCGESCDRCCPGYHQQPWRPGT 324
>sp|Q6A051|ATRN1_MOUSE Attractin-like protein 1 OS=Mus musculus GN=Atrnl1 PE=1 SV=2
Length = 1378
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HSTC++ +C++C + TTG CQ C G YG+ T C C C
Sbjct: 1005 WSFIQCPA-CQCNGHSTCINN-NVCEQCKNLTTGRQCQECMPGYYGDPTNGGQCTACTCG 1062
Query: 117 SHGNSVLGVCDSITGECIC-QDNTQGKNCERCLP--GYYGDPTDGGTCYYQCMARGMLT 172
H N VC TG+C C +G C+ C Y G+P GTCYY + T
Sbjct: 1063 GHAN----VCHLHTGKCFCTTKGIKGDQCQLCDSENRYVGNPLR-GTCYYSLLIDYQFT 1116
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 86/256 (33%), Gaps = 58/256 (22%)
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCER---------------CLPGYYGDPTDGGTCYY 163
GNS L +C + +Q K CER C PG+ GD
Sbjct: 38 GNSWL-LCYGFLYLALYAQVSQSKPCERTGSCFSGRCVNSTCLCDPGWVGDQCQ------ 90
Query: 164 QCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQ 223
C R LT P SG K +C W+I P ++ LR
Sbjct: 91 HCQGRFKLTEP------SGYLTDGPINYKY--KTKCTWLI-------EGYPNAVLRLRFN 135
Query: 224 PDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLE---AKSGVMT 280
C+ + +Y+YDG S+ + G+ E RG E + SG
Sbjct: 136 -HFATECSWDHMYVYDG-----DSIYAPLVAVLSGLIVPEV--RGNETVPEVVTTSGYAL 187
Query: 281 IHYKQGKPSE--GFNATYQIFSCPDKCPENRTCINN-------QCVCPPRRTGPDCQEEI 331
+H+ GFN Y I SCP+ C + C + C C G C
Sbjct: 188 LHFFSDAAYNLTGFNIFYSINSCPNNCSGHGKCTTSVSVASQVYCECDKYWKGEACDIPY 247
Query: 332 CPNECHEFLNHGTCDL 347
C C +HG CDL
Sbjct: 248 CKANCGS-PDHGYCDL 262
>sp|Q5VV63|ATRN1_HUMAN Attractin-like protein 1 OS=Homo sapiens GN=ATRNL1 PE=2 SV=2
Length = 1379
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HSTC++ +C++C + TTG CQ C G YG+ T C C C+
Sbjct: 1006 WSFIQCPA-CQCNGHSTCINN-NVCEQCKNLTTGKQCQDCMPGYYGDPTNGGQCTACTCS 1063
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYYQCMARGMLT 172
H N +C TG+C C +G C+ C Y G+P GTCYY + T
Sbjct: 1064 GHAN----ICHLHTGKCFCTTKGIKGDQCQLCDSENRYVGNPLR-GTCYYSLLIDYQFT 1117
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 86/256 (33%), Gaps = 58/256 (22%)
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCER---------------CLPGYYGDPTDGGTCYY 163
GNS L +C + +Q K CER C PG+ GD
Sbjct: 39 GNSWL-LCYGFLYLALYAQVSQSKPCERTGSCFSGRCVNSTCLCDPGWVGDQCQ------ 91
Query: 164 QCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQ 223
C R LT P SG K +C W+I P ++ LR
Sbjct: 92 HCQGRFKLTEP------SGYLTDGPINYKY--KTKCTWLI-------EGYPNAVLRLRFN 136
Query: 224 PDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLE---AKSGVMT 280
C+ + +Y+YDG S+ + G+ E RG E + SG
Sbjct: 137 -HFATECSWDHMYVYDG-----DSIYAPLIAVLSGLIVPEI--RGNETVPEVVTTSGYAL 188
Query: 281 IHYKQGKPSE--GFNATYQIFSCPDKCPENRTCINN-------QCVCPPRRTGPDCQEEI 331
+H+ GFN Y I SCP+ C + C + C C G C
Sbjct: 189 LHFFSDAAYNLTGFNIFYSINSCPNNCSGHGKCTTSVSVPSQVYCECDKYWKGEACDIPY 248
Query: 332 CPNECHEFLNHGTCDL 347
C C +HG CDL
Sbjct: 249 CKANCGS-PDHGYCDL 263
>sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN=Lama5 PE=1 SV=4
Length = 3718
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 61 DCSVNCLCNN-HSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHG 119
DCS N N S C G C C TTG HC+ C G YGNA C +CDC+ G
Sbjct: 1972 DCSGNGDPNMIFSDCDPLTGACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDCSPCG 2031
Query: 120 NSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
CD +G C+C+ G+ C+RCL GY+G
Sbjct: 2032 TE---TCDPQSGRCLCKAGVTGQRCDRCLEGYFG 2062
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAG--SYGNATTQEGCRKCDC--NSH 118
V C C+ HS C+ G GIC C T GD C+ CR G S + C C C
Sbjct: 1863 VPCQCHGHSDRCLPGSGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSCPCPLAVP 1922
Query: 119 GNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDP 155
N+ C G +C+C+ G +CERC PG++G+P
Sbjct: 1923 SNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGNP 1961
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 21/134 (15%)
Query: 36 NKCIYGYCKGPPDYSCQCE-LGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
++C+ GY P ++C C+ G C V LC+ C TG CQ
Sbjct: 623 DRCLPGYHGYPDCHACACDPRGALDQQCGVGGLCH--------------CRPGYTGATCQ 668
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
C G YG + C C C++ G S+ CD TG+C C+ G +C+ C+PG Y
Sbjct: 669 ECSPGFYGFPS----CIPCHCSADG-SLHTTCDPTTGQCRCRPRVTGLHCDMCVPGAYNF 723
Query: 155 PT-DGGTCYYQCMA 167
P + G+C+ +A
Sbjct: 724 PYCEAGSCHPAGLA 737
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 73 TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
TC G C C G C C G YG + CR CDC+ G ++ VCD +TG+
Sbjct: 1547 TCDMDSGQC-RCRPNVAGRRCDTCAPGFYGYPS----CRPCDCHEAG-TMASVCDPLTGQ 1600
Query: 133 CICQDNTQGKNCERCLPGYY 152
C C++N QG C++C G +
Sbjct: 1601 CHCKENVQGSRCDQCRVGTF 1620
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT----TQEGCRKCDCNSHGNSVLG 124
N G G+C +C TTG +C+ C G + + CR CDC S + G
Sbjct: 386 QNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQPLDSPHVCRPCDCES--DFTDG 443
Query: 125 VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY 162
C+ +TG C C+ N G+ C C GY TD CY
Sbjct: 444 TCEDLTGRCYCRPNFTGELCAACAEGY----TDFPHCY 477
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 77 GIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVL--GVCDS 128
G +CDE C T C C+ S+G GC +C+C+ G L CD
Sbjct: 1492 GARLCDELTGQCICPPRTVPPDCLVCQPQSFG-CHPLVGCEECNCSGPGVQELTDPTCDM 1550
Query: 129 ITGECICQDNTQGKNCERCLPGYYGDPT 156
+G+C C+ N G+ C+ C PG+YG P+
Sbjct: 1551 DSGQCRCRPNVAGRRCDTCAPGFYGYPS 1578
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 39 IYGYCKGPPDYS---CQ-CELGWTGVDCSVNCLCNN----HSTCVHGIGICDECHDWTTG 90
+ G C P Y+ CQ C G+ G + C C+ H+TC G C C TG
Sbjct: 652 VGGLCHCRPGYTGATCQECSPGFYGFPSCIPCHCSADGSLHTTCDPTTGQC-RCRPRVTG 710
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
HC C G+Y + G + N L C+C+ + +G +C+RC PG
Sbjct: 711 LHCDMCVPGAYNFPYCEAGSCHPAGLAPANPAL---PETQAPCMCRAHVEGPSCDRCKPG 767
Query: 151 YYG 153
Y+G
Sbjct: 768 YWG 770
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 22/142 (15%)
Query: 14 KDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHST 73
KD L RC + F + C C G+ GP + CQC GV N LC+ S
Sbjct: 514 KDPRLGRC--VCKPNFRGAHC-ELCAPGF-HGPSCHPCQCS--SPGV---ANSLCDPES- 563
Query: 74 CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGEC 133
G C C GD C +C G + C+ C C+ G G CD G C
Sbjct: 564 -----GQC-MCRTGFEGDRCDHCALGYFHFPL----CQLCGCSPAGTLPEG-CDE-AGRC 611
Query: 134 ICQDNTQGKNCERCLPGYYGDP 155
C+ G +C+RCLPGY+G P
Sbjct: 612 QCRPGFDGPHCDRCLPGYHGYP 633
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 84 CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCD-SITGECICQDNTQG 141
C G C C+ G +G +A+ EGC +C C+ G ++ GV + G+C C+ + G
Sbjct: 752 CRAHVEGPSCDRCKPGYWGLSASNPEGCTRCSCDPRG-TLGGVTECQGNGQCFCKAHVCG 810
Query: 142 KNCERCLPGYYG 153
K C C G++G
Sbjct: 811 KTCAACKDGFFG 822
Score = 38.5 bits (88), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C TTG C C G +G ++GCR+C C G CD TG C C G+
Sbjct: 2092 CQPGTTGPQCLECAPGYWG--LPEKGCRRCQCPR------GHCDPHTGHCTCPPGLSGER 2143
Query: 144 CERC 147
C+ C
Sbjct: 2144 CDTC 2147
Score = 36.2 bits (82), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 52 QCELGWTGVDCS-----VNCLCNNHSTCVHGIGICDE-----CHDWTTGDHCQYCRAGSY 101
+C+ G+ G+ S C C+ T + G+ C C G C C+ G +
Sbjct: 763 RCKPGYWGLSASNPEGCTRCSCDPRGT-LGGVTECQGNGQCFCKAHVCGKTCAACKDGFF 821
Query: 102 G-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
G + GCR C C+ G G C+ TG C C+ NTQG C +Y
Sbjct: 822 GLDYADYFGCRSCRCDVGGALGQG-CEPKTGACRCRPNTQGPTCSEPAKDHY 872
Score = 35.0 bits (79), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 95 YCR-AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+CR A + + G C C+ G +V C+ G+C C+ + G++C RC GY+G
Sbjct: 1424 FCRNAATSLSLFYNNGALPCGCHEVG-AVSPTCEPFGGQCPCRGHVIGRDCSRCATGYWG 1482
Query: 154 DP 155
P
Sbjct: 1483 FP 1484
>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN=LAMA1 PE=1 SV=2
Length = 3075
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN 120
DCS N + C G C +C T G HC+ C G YG+A T + CR C+C+ G
Sbjct: 850 DCSGNVDPSEAGHCDSVTGECLKCLGNTDGAHCERCADGFYGDAVTAKNCRACECHVKG- 908
Query: 121 SVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
S VC TG C C+ N G+ C++CL GYYG
Sbjct: 909 SHSAVCHLETGLCDCKPNVTGQQCDQCLHGYYG 941
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CD C G HC+ C + YGN T G C+KCDCN HG SV G CD +G+C+C+
Sbjct: 1476 CDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHG-SVHGDCDRTSGQCVCRLGA 1534
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCM 166
G C+ C P + TD +C +C+
Sbjct: 1535 SGLRCDECEPRHILMETDCVSCDDECV 1561
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDCNSHGNS 121
V C CNNHS TC G C C D T GDHC C +G YG T + C C C +
Sbjct: 1401 VPCSCNNHSDTCDPNTGKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPA 1460
Query: 122 VLGVCDSITGEC-----ICQDNTQGKNCERCLPGYYGDP-TDGGTC 161
+ G+ C +GK+CERC YYG+P T GG+C
Sbjct: 1461 SFSPTCVLEGDHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSC 1506
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEG--CRKCDCNSHGN--SVLGVCDSITGECICQDN 138
EC TG C+ C +G Y G C+ C+C+ H +V GVC C N
Sbjct: 710 ECPQGYTGTSCESCLSGYYRVDGILFGGICQPCECHGHAAECNVHGVC------IACAHN 763
Query: 139 TQGKNCERCLPGYYGDPTDG 158
T G +CE+CLPG+YG+P+ G
Sbjct: 764 TTGVHCEQCLPGFYGEPSRG 783
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C + TG+ C C+ G Y + T C C CN G++ C TG C+C++N +GK
Sbjct: 429 CKEGYTGEKCDRCQLG-YKDYPT---CVSCGCNPVGSASDEPC---TGPCVCKENVEGKA 481
Query: 144 CERCLPGYY 152
C+RC PG+Y
Sbjct: 482 CDRCKPGFY 490
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 26/135 (19%)
Query: 51 CQCELGWTGVDCSV------------------NCLCNNHSTCVHGIGICDECHDWTTGDH 92
C+C G+TG C C C+ H+ + G+C C TTG H
Sbjct: 709 CECPQGYTGTSCESCLSGYYRVDGILFGGICQPCECHGHAAECNVHGVCIACAHNTTGVH 768
Query: 93 CQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSITGECI----CQDNTQGKNC 144
C+ C G YG + T C+ C C N+ C G+ + C G C
Sbjct: 769 CEQCLPGFYGEPSRGTPGDCQPCACPLTIASNNFSPTCHLNDGDEVVCDWCAPGYSGAWC 828
Query: 145 ERCLPGYYGDPTDGG 159
ERC GYYG+PT G
Sbjct: 829 ERCADGYYGNPTVPG 843
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Query: 52 QCELGWTGVDCSVNCL-CNNHSTCVHGIGICDE----CHDWTTGDHCQYCRAGSYGNATT 106
QC G+ G+D C CN G DE C G C C G Y A
Sbjct: 934 QCLHGYYGLDSGHGCRPCNCSVAGSVSDGCTDEGQCHCVPGVAGKRCDRCAHGFY--AYQ 991
Query: 107 QEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C CDC N+ CD TGEC+C +TQG CE C G++G
Sbjct: 992 DGSCTPCDCPHTQNT----CDPETGECVCPPHTQGVKCEECEDGHWG 1034
Score = 39.7 bits (91), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 74 CVHGIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCD 127
C H CD C T G C+ C G +G + GC+ C+C+ G S CD
Sbjct: 1000 CPHTQNTCDPETGECVCPPHTQGVKCEECEDGHWG-YDAEVGCQACNCSLVG-STHHRCD 1057
Query: 128 SITGECICQDNTQGKNCERCLPGYYGDP 155
+TG C C+ G+ C++C GY P
Sbjct: 1058 VVTGHCQCKSKFGGRACDQCSLGYRDFP 1085
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 70 NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG----NATTQEGCRKCDCNSHGNSVLGV 125
N + G G+C C T G +C+ C G Y + E CR C+C+ G S+ V
Sbjct: 350 NTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKVSPYEDEPCRPCNCDPVG-SLSSV 408
Query: 126 C--DSI---------TGECICQDNTQGKNCERCLPGYYGDPT 156
C D + G+C C++ G+ C+RC GY PT
Sbjct: 409 CIKDDLHSDLHNGKQPGQCPCKEGYTGEKCDRCQLGYKDYPT 450
>sp|P02469|LAMB1_MOUSE Laminin subunit beta-1 OS=Mus musculus GN=Lamb1 PE=1 SV=3
Length = 1786
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
+ C G+ P D+ C+ C N + C G C +C T GDHCQ
Sbjct: 956 DDCASGFFGNPSDFGGSCQ----PCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQL 1011
Query: 96 CRAGSYGNATTQEGCRKCDCN------SHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
C+ G YG+A Q+ CRKC CN H N CD TG+C C N G+NC+RC P
Sbjct: 1012 CQYGYYGDALRQD-CRKCVCNYLGTVKEHCNGSDCHCDKATGQCSCLPNVIGQNCDRCAP 1070
Query: 150 GYY 152
+
Sbjct: 1071 NTW 1073
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+S + TG+ C + + S C G C +C G C C G++G
Sbjct: 760 FSISALIHQTGLACECDPQGSLSSVCDPNGGQC-QCRPNVVGRTCNRCAPGTFGFGPN-- 816
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
GC+ CDC+ G S CD+ITG+C C + C+RCLPGY+G P+
Sbjct: 817 GCKPCDCHLQG-SASAFCDAITGQCHCFQGIYARQCDRCLPGYWGFPS 863
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGK 142
C C C G +G + C+ C CN H CD++TGEC+ CQD T G
Sbjct: 842 CFQGIYARQCDRCLPGYWGFPS----CQPCQCNGHALD----CDTVTGECLSCQDYTTGH 893
Query: 143 NCERCLPGYYGDPTDG 158
NCERCL GYYGDP G
Sbjct: 894 NCERCLAGYYGDPIIG 909
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Query: 49 YSCQCEL---GWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNA 104
Y+ QC+ G+ G C CN H+ C G C C D+TTG +C+ C AG YG+
Sbjct: 847 YARQCDRCLPGYWGFPSCQPCQCNGHALDCDTVTGECLSCQDYTTGHNCERCLAGYYGDP 906
Query: 105 TTQEG--CRKCDCNS---HGNSVLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGDP 155
G CR C C G C D +T + C+C G C+ C G++G+P
Sbjct: 907 IIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGFFGNP 966
Query: 156 TD-GGTC 161
+D GG+C
Sbjct: 967 SDFGGSC 973
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 84 CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQG 141
C G+ C C+ G Y +A GC+ C CN G G CDS TG C C+ G
Sbjct: 428 CKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTG 487
Query: 142 KNCERCLPGYYGDPTDGGTC 161
+ C++CLP ++G D C
Sbjct: 488 QRCDQCLPQHWGLSNDLDGC 507
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 62/165 (37%), Gaps = 36/165 (21%)
Query: 41 GYCKGPPDYS-------CQCELGWTGVDCSV-----------------NCLCNNHSTCVH 76
G C G D+S C+C+L G C V +C CN T +
Sbjct: 409 GICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGT-IP 467
Query: 77 GIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSIT 130
G CD C TG C C +G + +GCR CDC+ G ++ C +
Sbjct: 468 GGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCD-LGGALNNSCSEDS 526
Query: 131 GECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPG 175
G+C C + G+ C GYY D +Y A GPG
Sbjct: 527 GQCSCLPHMIGRQCNEVESGYYFTTLD----HYIYEAEEANLGPG 567
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 48/122 (39%), Gaps = 37/122 (30%)
Query: 65 NCLCNNH-STCVHGIGICDE----------CHDWTTGDHCQYCRAGSY------GNATTQ 107
NC C H S C G+ +E C T G +C+ C +
Sbjct: 270 NCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNS 329
Query: 108 EGCRKCDCNSH--------------GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C+KC+CN H GN GVCD+ CQ NT G+NCE+C P Y+
Sbjct: 330 NACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDN------CQHNTMGRNCEQCKPFYFQ 383
Query: 154 DP 155
P
Sbjct: 384 HP 385
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
C+ N + +C G C +C G C C+ +G+ + CR CDC+ G
Sbjct: 1084 CNCNAAHSFGPSCNEFTGQC-QCMPGFGGRTCSECQELFWGDPDVE--CRACDCDPRGIE 1140
Query: 122 VLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMA 167
CD TG+C+C + +G C++C GY G D C +QC A
Sbjct: 1141 T-PQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPDCTPC-HQCFA 1184
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 65 NCLCNNHSTCVH------------GIGICDECHDWTTGDHCQYCRAGSYGNATTQ----E 108
C CN HS+ H G+CD C T G +C+ C+ + +
Sbjct: 334 KCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPN 393
Query: 109 GCRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYY 152
C C C+ G+ G+CD I G+C C+ + +G+ C+ C G+Y
Sbjct: 394 LCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFY 445
Score = 38.5 bits (88), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 90 GDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSV-LGVCDSITGECI-CQDNTQGKNCER 146
G C C +G +GN + G C+ C C+ + ++ CD TG C+ C +T+G +C+
Sbjct: 952 GSRCDDCASGFFGNPSDFGGSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQL 1011
Query: 147 CLPGYYGD 154
C GYYGD
Sbjct: 1012 CQYGYYGD 1019
>sp|Q9R0B6|LAMC3_MOUSE Laminin subunit gamma-3 OS=Mus musculus GN=Lamc3 PE=2 SV=2
Length = 1581
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNS 117
CS N N C G C C TTG HC++CR G YG+A + C C C+
Sbjct: 823 QCSGNVDLNAVGNCDPHSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDL 882
Query: 118 HGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
G+ C+ +TG+C+C G++C RC PG+Y
Sbjct: 883 RGSVSEKTCNPVTGQCVCLPYVSGRDCSRCSPGFY 917
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 77/194 (39%), Gaps = 51/194 (26%)
Query: 3 IIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCK-----------GPPDYSC 51
I+ + L T DD VL Y + S + + G CK +C
Sbjct: 243 ILISLDRLNTFGDDIFKDPRVLQSYYYAVS---DFSVGGRCKCNGHASECEPNAAGQLAC 299
Query: 52 QCELGWTGVDCS----------------------VNCLCNNHS-----------TCVHGI 78
+C+ TGVDC + C C+ HS + HG
Sbjct: 300 RCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCNCSGHSEECTFDRELYRSTGHG- 358
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
G C C D TTG HC+ C Y + + C+ CDC+ G+ L CD+ +G C C+
Sbjct: 359 GHCQRCRDHTTGPHCERCEKNYY-RWSPKTPCQPCDCHPAGSLSL-QCDN-SGVCPCKPT 415
Query: 139 TQGKNCERCLPGYY 152
G C+RCLPG++
Sbjct: 416 VTGWKCDRCLPGFH 429
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C TG C++C G Y G C C CN HG CD TG C+C +T
Sbjct: 687 CPQGYTGQFCEFCALG-YKREIPHGGPYANCIPCTCNQHG-----TCDPNTGICLCGHHT 740
Query: 140 QGKNCERCLPGYYGDPTDG 158
+G +CERC+PG+YG+ G
Sbjct: 741 EGPSCERCMPGFYGNAFSG 759
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 36 NKCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
+C Y + P CQ C+ G S++ C+N C C TG C
Sbjct: 374 ERCEKNYYRWSPKTPCQPCDCHPAG---SLSLQCDNSGVC--------PCKPTVTGWKCD 422
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C G + + ++ GCR C CN G+ LG CD +G C C++N +G C+RC PG +
Sbjct: 423 RCLPGFH--SLSEGGCRPCACNVAGS--LGTCDPRSGNCPCKENVEGSLCDRCRPGTF 476
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 64 VNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT--QEGCRKCDCNSHGNS 121
+ C CN H TC GIC C T G C+ C G YGNA + + C+ C C
Sbjct: 717 IPCTCNQHGTCDPNTGIC-LCGHHTEGPSCERCMPGFYGNAFSGRADDCQPCPCPGQS-- 773
Query: 122 VLGVCDSI--TGECICQ---DNTQGKNCERCLPGYYGDP 155
C +I +G+ +C +G+ CE C G++GDP
Sbjct: 774 ---ACATIPESGDVVCTHCPPGQRGRRCESCEDGFFGDP 809
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C + +G C C G Y + + GC+ C C+ G S+ C TG+C C+ G+
Sbjct: 900 CLPYVSGRDCSRCSPGFY-DLQSGRGCQSCKCHPLG-SLENKCHPKTGQCPCRPGVTGQA 957
Query: 144 CERCLPGYYGDPTDG 158
C+RC G++G G
Sbjct: 958 CDRCQLGFFGFSIKG 972
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 112 KCDCNSHGNSVLGVCDSITG---ECICQDNTQGKNCERCLPGYYGDPTDGGT 160
+C CN H + C+ C CQ NT G +CERCLP + P GT
Sbjct: 279 RCKCNGHASE----CEPNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGT 326
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C TG C C+ G +G + +GCR C C+ G + ++ T C+C+ G
Sbjct: 949 CRPGVTGQACDRCQLGFFGFSI--KGCRDCRCSPLGAASSQCHENST--CVCRPGFVGYK 1004
Query: 144 CERCLPGYYGDPTDGG-----TCY 162
C+RC ++ D G TCY
Sbjct: 1005 CDRCQDNFFLADGDTGCQECPTCY 1028
>sp|P15800|LAMB2_RAT Laminin subunit beta-2 OS=Rattus norvegicus GN=Lamb2 PE=2 SV=1
Length = 1801
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 68 CNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLG 124
C++H V G+ G C C + G CQ CR G +G +A+ GC++C CNS G G
Sbjct: 426 CDSHDDPVLGLVSGQC-RCKEHVVGTRCQQCRDGFFGLSASNPRGCQRCQCNSRGTVPGG 484
Query: 125 V-CDSITGECICQDNTQGKNCERCLPGYYG 153
CDS +G C C+ G C+RCLPG++G
Sbjct: 485 TPCDSSSGTCFCKRLVTGDGCDRCLPGHWG 514
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 30/140 (21%)
Query: 65 NCLCNNHSTCVH------------GIGICDECHDWTTGDHCQYCRAGSYGNATTQ----E 108
C CN HS H G+CD C T G HC+ CR Y + T
Sbjct: 349 KCECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPA 408
Query: 109 GCRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYYG----DPT 156
CR CDC+ G+ G CDS ++G+C C+++ G C++C G++G +P
Sbjct: 409 ACRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASNPR 468
Query: 157 DGGTCYYQCMARGMLTGPGP 176
C QC +RG + G P
Sbjct: 469 GCQRC--QCNSRGTVPGGTP 486
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 52 QCELGWTGVDCS-----VNCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGS 100
QC G+ G+ S C CN+ T V G CD C TGD C C G
Sbjct: 454 QCRDGFFGLSASNPRGCQRCQCNSRGT-VPGGTPCDSSSGTCFCKRLVTGDGCDRCLPGH 512
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G + GCR CDC+ G ++ CD TG+C C+ + G+ CE+ PGY+
Sbjct: 513 WGLSHDLLGCRPCDCDV-GGALDPQCDEATGQCPCRPHMIGRRCEQVQPGYF 563
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
C G+ P +C+L +CS N + C G C C T G HC +C+
Sbjct: 971 CAPGHFGDPSKPGGRCQL----CECSGNIDPTDPGACDPHTGQCLRCLHHTEGPHCGHCK 1026
Query: 98 AGSYGNATTQEGCRKCDCNSHG-------NSVLGVCDSITGECICQDNTQGKNCERCLPG 150
G +G A Q C +C CN G ++ L CD TG+C C + QG +C+RC P
Sbjct: 1027 PGFHGQAARQS-CHRCTCNLLGTDPQRCPSTDLCHCDPSTGQCPCLPHVQGLSCDRCAPN 1085
Query: 151 YY 152
++
Sbjct: 1086 FW 1087
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 53 CELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG-- 109
C+ G G C+CN + C G C C D+T G+HC+ C AG +G+ G
Sbjct: 867 CQRGQWGFPNCRPCVCNGRADECDAHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQ 926
Query: 110 CRKCDCNSHGNSVLGVCDSITGE-------CICQDNTQGKNCERCLPGYYGDPTD-GGTC 161
CR C C S S + C C+ G CE C PG++GDP+ GG C
Sbjct: 927 CRPCPCPEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSKPGGRC 986
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGK 142
C G C +C+ G +G CR C CN + CD+ TG C+ C+D T G+
Sbjct: 855 CRTGAFGLRCDHCQRGQWGFPN----CRPCVCNGRADE----CDAHTGACLGCRDYTGGE 906
Query: 143 NCERCLPGYYGDP 155
+CERC+ G++GDP
Sbjct: 907 HCERCIAGFHGDP 919
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 20/62 (32%)
Query: 109 GCRKCDCNSH--------------GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
CRKC+CN H GN GVCD CQ NT G++CE C P +Y D
Sbjct: 346 ACRKCECNGHSHSCHFDMAVYLASGNVSGGVCDG------CQHNTAGRHCELCRPFFYRD 399
Query: 155 PT 156
PT
Sbjct: 400 PT 401
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 73 TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
TC G C CH G C C+ +G+ Q CR CDC+ G C TG
Sbjct: 1109 TCNEFTGQC-HCHAGFGGRTCSECQELHWGDPGLQ--CRACDCDPRGIDK-PQCHRSTGH 1164
Query: 133 CICQDNTQGKNCERCLPGYYG 153
C C+ G C++C G+ G
Sbjct: 1165 CSCRPGVSGVRCDQCARGFSG 1185
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQGK 142
C G C C A ++ N T+ GC+ C C H + G C+ TG+C C G+
Sbjct: 1070 CLPHVQGLSCDRC-APNFWNFTSGRGCQPCAC--HPSRARGPTCNEFTGQCHCHAGFGGR 1126
Query: 143 NCERCLPGYYGDP 155
C C ++GDP
Sbjct: 1127 TCSECQELHWGDP 1139
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 73/185 (39%), Gaps = 27/185 (14%)
Query: 1 MSIIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGV 60
M ++ + +T K LY F + + K CQC +TG
Sbjct: 1748 MKVLHSLQNITL-KASYFDHPKTSTLYEFGLEISEPNGVDSVIKASSVEQCQCPAPYTGP 1806
Query: 61 DCS------------------VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSY 101
C V C CN HS TC GIC +C T GDHC++C G Y
Sbjct: 1807 SCQLCASGYHRVQSGSFLGACVPCECNGHSATCDPDTGICTDCEHNTNGDHCEFCNEGHY 1866
Query: 102 GNAT--TQEGCRKCDCN-SHGNSVLGVCD-SITG---ECICQDNTQGKNCERCLPGYYGD 154
GNAT + C C C + N+ CD S G +C C+ G C+RC G++G
Sbjct: 1867 GNATNGSPYDCMACACPFAPTNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRCASGFFGH 1926
Query: 155 PTDGG 159
P G
Sbjct: 1927 PQISG 1931
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 56/127 (44%), Gaps = 24/127 (18%)
Query: 46 PPDYSCQCELGWTGVDCS-------------VNCLCN----NHSTCVHGIGICDECHDWT 88
P D C C+ G+ G C V C+C+ H C G C EC
Sbjct: 486 PEDGQCPCKAGFGGTFCETCADGYTNVTAGCVECVCDATGSEHGNCSASTGQC-ECKPAY 544
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL 148
G C C+ G +G + C+ C+C+ G GVCD TG+C+C++ G C+RC
Sbjct: 545 AGLSCDKCQVGYFG-----DDCKFCNCDPMGTEG-GVCDQTTGQCLCKEGFAGDKCDRCD 598
Query: 149 PGYYGDP 155
+YG P
Sbjct: 599 IAFYGYP 605
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
C+ N + +C G C C T G HC+ C A YG+A T + C C+C+ G+
Sbjct: 1939 CNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQ 1998
Query: 122 VLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
CD+ +G C C+ N +G +C+RC P ++G
Sbjct: 1999 ---YCDNKSGGCECKINVEGDSCDRCKPDHWG 2027
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCR 111
+C G+ + C CN C G C C G C C + ++G GC+
Sbjct: 1447 RCAPGYYNFPECIKCQCNAGQQCDERTGQC-FCPPHVEGQTCDRCVSNAFGYDPLI-GCQ 1504
Query: 112 KCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGYYGDP 155
KC C+ G+ VCD +G+C+C+++ G+ C+RCL G+YG P
Sbjct: 1505 KCGCHPQGSEGGNLVCDPESGQCLCRESMGGRQCDRCLAGFYGFP 1549
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 84 CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQG 141
C TG C C+ + ++GCR CDCN +G S L CD TG+C+C+ N G
Sbjct: 726 CRKHVTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADG 785
Query: 142 KNCERCLPGYY 152
+ C++C G+Y
Sbjct: 786 RRCDQCADGFY 796
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 84 CHDWTTGDHCQYCRAG--SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
C TG C++C G +YG + GC KCDC + S+ VCD TG+C CQ+ G
Sbjct: 2057 CRPGATGMRCEHCEHGYWNYG----EHGCDKCDCEADL-SMGTVCDVRTGQCHCQEGATG 2111
Query: 142 KNCERCLPGYYGDPTDG 158
C++CLP Y PT G
Sbjct: 2112 SRCDQCLPSYLRIPTYG 2128
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 84 CHDWTTGDHCQYCRAGSYGN-ATTQEGCRKCDCNSHGN-SVLGVCDSITGEC-ICQDNTQ 140
C TGD C C +G +G+ + E C C CN + N + C +G+C +C+ NT
Sbjct: 1907 CKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTD 1966
Query: 141 GKNCERCLPGYYGDPTDGGTC 161
G++CE C +YGD C
Sbjct: 1967 GRHCESCAAWFYGDAVTAKNC 1987
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Query: 48 DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNA--- 104
+Y + +L +D N G G+C C + T G +C C G +
Sbjct: 367 EYDAEVDLNKQSIDSQGN---------YEGGGVCKNCRENTEGVNCNKCSFGYFRPEGVT 417
Query: 105 -TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
+ C+ CDC+ ++ G C TG+C C G++C++C GYY P
Sbjct: 418 WNEPQPCKVCDCDPDKHT--GACAEETGKCECLPRFVGEDCDQCASGYYDAP 467
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHG 119
DC+VN + +TC G C C G C C G Y N+ Q GC C C+ G
Sbjct: 757 DCNVNGTISGLNTCDLKTGQC-MCKKNADGRRCDQCADGFYRLNSYNQMGCESCHCDI-G 814
Query: 120 NSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
++ CD +G+C C+ G C++ + +Y
Sbjct: 815 GALRAECDITSGQCKCRPRVTGLRCDQPIENHY 847
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C+ TG C C AG Y CR C+C G + CDS G+C C+ N +G+
Sbjct: 631 CNGNFTGRTCDKCAAGFY----NYPDCRGCECLLSG-AKGQTCDS-NGQCYCKGNFEGER 684
Query: 144 CERCLPGYYGDP 155
C+RC P +Y P
Sbjct: 685 CDRCKPNFYNFP 696
Score = 39.3 bits (90), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 113 CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
CDC + G+ C+ G+C C+ G+ CERC PGYY P
Sbjct: 1415 CDCVAQGSESFQ-CEQYGGQCKCKPGVIGRRCERCAPGYYNFP 1456
Score = 38.5 bits (88), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C + G C C AG YG C C CN G + +CD+ +C C++N G
Sbjct: 1529 CRESMGGRQCDRCLAGFYGFPH----CYGCSCNRAG-TTEEICDATNAQCKCKENVYGGR 1583
Query: 144 CERCLPGYY 152
CE C G +
Sbjct: 1584 CEACKAGTF 1592
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 16/119 (13%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVD-CSV-NCLCNNHS-TCVHGIGICDECHDWTTGDH 92
NKC +GY + P+ + W C V +C + H+ C G C EC G+
Sbjct: 404 NKCSFGYFR--PE-----GVTWNEPQPCKVCDCDPDKHTGACAEETGKC-ECLPRFVGED 455
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
C C +G Y C+ C+CN +G ++ VC G+C C+ G CE C GY
Sbjct: 456 CDQCASGYYDAPK----CKPCECNVNG-TIGDVCLPEDGQCPCKAGFGGTFCETCADGY 509
>sp|P11046|LAMB1_DROME Laminin subunit beta-1 OS=Drosophila melanogaster GN=LanB1 PE=1 SV=4
Length = 1788
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 24/125 (19%)
Query: 51 CQCELGWTGVDCSV----------------NCLCNNH------STCVHGIGICDECHDWT 88
C C+ G++G C + C C+N+ C G C +C T
Sbjct: 960 CHCQEGYSGSRCEICADNFFGNPDNGGTCSKCECSNNVDLYDTGNCDRQTGACLKCLYQT 1019
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHG-NSVLGVCDSITGECICQDNTQGKNCERC 147
TGDHC+ C+ G +G+A Q+ C++C+C+ G N+ + CD TG+C C N QG C++C
Sbjct: 1020 TGDHCELCKDGFFGDA-LQQNCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCDQC 1078
Query: 148 LPGYY 152
++
Sbjct: 1079 AENHW 1083
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 52 QCELG-WTGVDCSVNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQ 107
QC+ G W +C V C CN H+ TC G C +C D TTG C C G YGN ++
Sbjct: 869 QCQPGYWNFPECRV-CQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSE 927
Query: 108 EGCRKCDCNSHGNSVLGVCDSITGE-------CICQDNTQGKNCERCLPGYYGDPTDGGT 160
GCR C C S L D + + C CQ+ G CE C ++G+P +GGT
Sbjct: 928 IGCRPCRCPETVASGLAHADGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNPDNGGT 987
Query: 161 C 161
C
Sbjct: 988 C 988
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
+C G C C G+YG EGC+ CDCNS G S CD ITG+C C NT G+
Sbjct: 809 QCKPNVVGRQCDQCAPGTYGFGP--EGCKACDCNSIG-SKDKYCDLITGQCQCVPNTYGR 865
Query: 143 NCERCLPGYYGDP 155
C +C PGY+ P
Sbjct: 866 ECNQCQPGYWNFP 878
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 24/116 (20%)
Query: 66 CLCNNHSTCVH------------GIGICDECHDWTTGDHCQYCRAGSYGNA----TTQEG 109
C CN+H+ H G+CD C T G HC+ C Y + T++
Sbjct: 355 CECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERV 414
Query: 110 CRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYYGDPTD 157
C+ CDC+ G+S G+CDS + G C C+ G+ C +C GY+ +D
Sbjct: 415 CQPCDCDPQGSSDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSD 470
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 66 CLCN-----NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN 120
C CN N+S CV G C +C + TG C C +YG + + EGC C+C++ G
Sbjct: 478 CTCNPLGTLNNSGCVMRTGEC-KCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDA-GG 535
Query: 121 SVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
S CD I+G+C C+ + G++C + Y+
Sbjct: 536 SYDNYCDVISGQCRCRPHMTGRSCSQPKQNYF 567
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 84 CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C + TG C C+ G + + EGC C CN G C TGEC C+ GK
Sbjct: 448 CKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGTLNNSGCVMRTGECKCKKYVTGK 507
Query: 143 NCERCLPGYYG 153
+C +C+P YG
Sbjct: 508 DCNQCMPETYG 518
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV-LGVCDSITGECI-CQDNTQG 141
C + +G C+ C +GN C KC+C+++ + G CD TG C+ C T G
Sbjct: 962 CQEGYSGSRCEICADNFFGNPDNGGTCSKCECSNNVDLYDTGNCDRQTGACLKCLYQTTG 1021
Query: 142 KNCERCLPGYYGD 154
+CE C G++GD
Sbjct: 1022 DHCELCKDGFFGD 1034
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 71 HSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSIT 130
H C G C +C G C C+A +GN E C+ C+C+ G + CD T
Sbjct: 1103 HEQCNSYTGQC-QCKPGFGGRACNQCQAHYWGNPN--EKCQPCECDQFGAADFQ-CDRET 1158
Query: 131 GECICQDNTQGKNCERCLPGYYG 153
G C+C + G C C GY G
Sbjct: 1159 GNCVCHEGIGGYKCNECARGYIG 1181
Score = 39.7 bits (91), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 33/109 (30%)
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCR--------AGSYGNATTQEGCRKCDCNSHGN 120
+N VHG EC T G +C+ C ++G T C+KC+CN H
Sbjct: 308 DNEDGMVHGRC---ECTHNTKGMNCEECEDFFNDLPWKPAFGKKTN--ACKKCECNDHAV 362
Query: 121 S--------------VLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
S GVCD+ C NT+G++CE C+P +Y DP
Sbjct: 363 SCHFDEAVFTASGFVSGGVCDN------CLHNTRGQHCEECMPYFYRDP 405
Score = 38.9 bits (89), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 108 EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+G C+CN G S+ VC+S G C C+ N G+ C++C PG YG
Sbjct: 784 DGASMCNCNPTG-SLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYG 828
>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis elegans GN=lam-2 PE=1
SV=3
Length = 1633
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 55 LGWTGVDCSVNCLCNNHSTCV-HGIG--ICDECHDWTTGDHCQYCRAGSYGNATTQEGCR 111
L T DC C C N C+ H G IC EC + TG C C G +GN C
Sbjct: 775 LQGTEEDCQ-KCPCPNDGPCILHADGDVICTECPNGYTGRRCDECSDGYFGNPKDGTECV 833
Query: 112 KCDC--NSHGNSVLGVCDSITGEC-ICQDNTQGKNCERCLPGYYGD 154
+C C N+ NS+ G CD ITGEC C NT G NCE C PGY+GD
Sbjct: 834 ECACSGNTDPNSI-GNCDKITGECKKCIFNTHGFNCENCKPGYWGD 878
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDN 138
EC G C+ C +G + T G C KCDC++H NS C++ +G CIC+ N
Sbjct: 703 ECLPGFVGQFCESCESG-FRRETKFGGPFNHCIKCDCHNHSNS----CEAESGSCICEHN 757
Query: 139 TQGKNCERCLPGYYGDPTDG 158
T G CERC GYYGD G
Sbjct: 758 TAGDTCERCARGYYGDALQG 777
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGN 120
+ C C+NHS +C G C C T GD C+ C G YG+A T+E C+KC C + G
Sbjct: 734 IKCDCHNHSNSCEAESGSCI-CEHNTAGDTCERCARGYYGDALQGTEEDCQKCPCPNDGP 792
Query: 121 SVLGVCDSITGECICQD---NTQGKNCERCLPGYYGDPTDGGTC 161
+L G+ IC + G+ C+ C GY+G+P DG C
Sbjct: 793 CILHA----DGDVICTECPNGYTGRRCDECSDGYFGNPKDGTEC 832
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
++C +G+ CQ +C+ + L + +TC G C +C TG C
Sbjct: 928 DQCAHGFYNITSGLGCQ--------ECNCDPLGSEGNTCDVNTGQC-QCKPGVTGQRCDR 978
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C +G + GC+ CDC G S CD +G+C+C++N +G+ C++C YG
Sbjct: 979 CADYHFGFSAN--GCQPCDCEYIG-SENQQCDVNSGQCLCKENVEGRRCDQCAENRYG 1033
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 74 CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGEC 133
C G CD C G C C G Y N T+ GC++C+C+ G S CD TG+C
Sbjct: 909 CNQQDGQCD-CLPNVIGIQCDQCAHGFY-NITSGLGCQECNCDPLG-SEGNTCDVNTGQC 965
Query: 134 ICQDNTQGKNCERCLPGYYGDPTDG 158
C+ G+ C+RC ++G +G
Sbjct: 966 QCKPGVTGQRCDRCADYHFGFSANG 990
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 112 KCDCNSHGNSVLGVCDSITGE----CICQDNTQGKNCERCLPGYYGDPTDGGT 160
+C CN H + +G S+ GE C C+ NTQG +C CLP Y P GT
Sbjct: 286 RCKCNGHASECVG-SSSVDGENRLVCRCEHNTQGADCNECLPFYNDRPWRSGT 337
Score = 38.5 bits (88), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 76 HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECIC 135
HG G C +C T G HC+ C A + + C C CN G S+ CD+ G+C C
Sbjct: 368 HG-GHCIDCQGNTQGVHCEQCIANHW-RRPGENYCVACGCNEIG-SLSTQCDN-EGKCQC 423
Query: 136 QDNTQGKNCERCLPGYYGDPTDG 158
+ G+ C++CL G+Y T+G
Sbjct: 424 KPGVTGRFCDQCLDGFYDFSTNG 446
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE--GCRKCDCNSHG 119
CS N N+ C G C +C T G +C+ C+ G +G+A + C+ C C + G
Sbjct: 837 CSGNTDPNSIGNCDKITGECKKCIFNTHGFNCENCKPGYWGDALIEPKGNCQSCGCFAAG 896
Query: 120 ------NSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+ L C+ G+C C N G C++C G+Y
Sbjct: 897 TRRPNNDYTLLECNQQDGQCDCLPNVIGIQCDQCAHGFY 935
Score = 32.0 bits (71), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 63 SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN-S 121
S++ C+N C +C TG C C G Y +T GC+ C C + G+ +
Sbjct: 410 SLSTQCDNEGKC--------QCKPGVTGRFCDQCLDGFYDFSTN--GCKNCGCETSGSLN 459
Query: 122 VLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTD 157
CDS +G C C+ N +G+ C++C PGY+ T+
Sbjct: 460 NQPRCDSSSGSCSCKLNVEGRQCDKCKPGYFDLSTE 495
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 66/147 (44%), Gaps = 35/147 (23%)
Query: 43 CKGPPDY---SCQ-CELGWTGVDCSV------NCLCNNHS-TCVHGIGICDECHDWTTGD 91
C PP Y SCQ C+ G+T V + C C+ HS TC G C C T G
Sbjct: 1126 CTCPPGYRGPSCQDCDTGYTRVPSGLYLGTCERCNCHGHSETCEPETGACQSCQHHTEGA 1185
Query: 92 HCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSVLG--------------VCDSITGECIC 135
C+ C+ G YG+A T + C+ C C +G G CDS C
Sbjct: 1186 SCEQCQPGYYGDAQRGTPQDCQPCPC--YGAPAAGQAAHTCFLDTDGHPTCDS------C 1237
Query: 136 QDNTQGKNCERCLPGYYGDPTDGGTCY 162
G++CERC PGYYG+P+ G C+
Sbjct: 1238 SPGHSGRHCERCAPGYYGNPSQGQPCH 1264
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 63/139 (45%), Gaps = 20/139 (14%)
Query: 43 CKGPPDY---SCQ-CELGWTGVDCSVN------CLCNNHSTCVHG-IGICDECHDWTTGD 91
C+ PP Y SCQ C G+T + C CN HS H G C C T G+
Sbjct: 1530 CRCPPGYVGLSCQDCAPGYTRTGSGLYLGQCELCECNGHSDLCHPETGACSRCQHNTAGE 1589
Query: 92 HCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSITGE----CICQDNTQGKN 143
C+ C G YG+AT T E C+ C C + N C+S+ C+ G+
Sbjct: 1590 FCELCATGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQY 1649
Query: 144 CERCLPGYYGDP-TDGGTC 161
CE+C PGY GDP GG C
Sbjct: 1650 CEQCAPGYEGDPNVQGGRC 1668
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 34/109 (31%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGC 110
C+C +G++G+ C C+ H T V G G Y C
Sbjct: 731 CRCPIGYSGLSCES---CDAHFTRVPG---------------------GPYLGT-----C 761
Query: 111 RKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDG 158
C+CN H +S CD + G C+ CQ NT+G C++C PG++GD T
Sbjct: 762 SGCNCNGHASS----CDPVYGHCLNCQHNTEGPQCDKCKPGFFGDATKA 806
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRK---------CDCNSHGNSVLGVCDSITG 131
CD C +G HC+ C G YGN + + C + C C+ HG S+ CD+ G
Sbjct: 1234 CDSCSPGHSGRHCERCAPGYYGNPSQGQPCHRDGQVPEVLGCGCDPHG-SISSQCDA-AG 1291
Query: 132 ECICQDNTQGKNCERCLPGYY 152
+C C+ +G++C C P ++
Sbjct: 1292 QCQCKAQVEGRSCSHCRPHHF 1312
>sp|O75445|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3
Length = 5202
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGC 110
CQC L SVN CN HS G C EC G C CR YG T C
Sbjct: 747 CQCNL-----HGSVNKFCNPHS------GQC-ECKKEAKGLQCDTCRENFYGLDVT--NC 792
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+ CDC++ G+ VC++ TG+CIC+ N +G+ C +CL G +
Sbjct: 793 KACDCDTAGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGNF 834
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 24/109 (22%)
Query: 66 CLCNNHSTCVH---------------GIGICDECHDWTTGDHCQYCRAGSY----GNATT 106
C CN+HS H G G+CD+C TTG +C+ C+ + + +
Sbjct: 575 CQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGADPSA 634
Query: 107 QEGCRKCDCNSHGN---SVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+ C+ CDC++ G S+L CD I G+C C+ + G+ C +C G+Y
Sbjct: 635 IDVCKPCDCDTVGTRNGSIL--CDQIGGQCNCKRHVSGRQCNQCQNGFY 681
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ--EGCRKCDCNSH 118
+C N C G C C TG C C Y N T + C+ C+C+S
Sbjct: 848 NCDKTGTINGSLLCNKSTGQCP-CKLGVTGLRCNQCEPHRY-NLTIDNFQHCQMCECDSL 905
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G +CD I+G+C+C N QG+ C +C PG+Y P + C
Sbjct: 906 GTLPGTICDPISGQCLCVPNRQGRRCNQCQPGFYISPGNATGC 948
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 24/131 (18%)
Query: 51 CQCELGWTGVDCS------VNCLCNNHSTCVH----GIG-----ICDE------CHDWTT 89
C C+LG TG+ C+ N +N C +G ICD C
Sbjct: 868 CPCKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQ 927
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD-NTQGKNCERCL 148
G C C+ G Y + GC C C++ G +V +C+S+TG+C+CQD + G+ C++C
Sbjct: 928 GRRCNQCQPGFYISPGNATGCLPCSCHTTG-AVNHICNSLTGQCVCQDASIAGQRCDQCK 986
Query: 149 PGYYG-DPTDG 158
Y+G DP G
Sbjct: 987 DHYFGFDPQTG 997
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAG-SYGNATTQEGCRKCDCNSHG 119
+C+ + + TC G C +C G C +C G + + GC C CN HG
Sbjct: 695 NCNTSGTVDGDITCHQNSGQC-KCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNLHG 753
Query: 120 NSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
SV C+ +G+C C+ +G C+ C +YG
Sbjct: 754 -SVNKFCNPHSGQCECKKEAKGLQCDTCRENFYG 786
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 63 SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV 122
+VN +CN+ + G +C + G C C+ +G C+ C+C+ G ++
Sbjct: 958 AVNHICNS----LTGQCVCQDAS--IAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSG-AL 1010
Query: 123 LGVCDSITGECICQDNTQGKNCERCLP-GYYGDPTDGGTCYYQCMARGMLTGPGPQG-LG 180
C +TG+C C+ G C+ C+P + D + C ++ P P+G +
Sbjct: 1011 NETCHLVTGQCFCKQFVTGSKCDACVPSASHLDVNNLLGC-----SKTPFQQPPPRGQVQ 1065
Query: 181 SGLAERNAWEGKDTPSRECL 200
S A +W D+P+ L
Sbjct: 1066 SSSAINLSWSPPDSPNAHWL 1085
>sp|Q61292|LAMB2_MOUSE Laminin subunit beta-2 OS=Mus musculus GN=Lamb2 PE=2 SV=2
Length = 1799
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 30/140 (21%)
Query: 65 NCLCNNHSTCVH------------GIGICDECHDWTTGDHCQYCRAGSYGNATTQEG--- 109
C CN H+ H G+CD C T G HC++CR Y + T
Sbjct: 349 KCECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPA 408
Query: 110 -CRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYYG----DPT 156
CR CDC+ G+ G CDS ++G+C C+++ G C++C G++G DP
Sbjct: 409 VCRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASDPR 468
Query: 157 DGGTCYYQCMARGMLTGPGP 176
C QC +RG + G P
Sbjct: 469 GCQRC--QCNSRGTVPGSSP 486
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
Query: 68 CNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLG 124
C++H V G+ G C C + G CQ CR G +G +A+ GC++C CNS G +V G
Sbjct: 426 CDSHDDPVLGLVSGQC-RCKEHVVGTRCQQCRDGFFGLSASDPRGCQRCQCNSRG-TVPG 483
Query: 125 V--CDSITGECICQDNTQGKNCERCLPGYYG 153
CDS +G C C+ G C+RCLPG++G
Sbjct: 484 SSPCDSSSGTCFCKRLVTGHGCDRCLPGHWG 514
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 52 QCELGWTGVDCS-----VNCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGS 100
QC G+ G+ S C CN+ T V G CD C TG C C G
Sbjct: 454 QCRDGFFGLSASDPRGCQRCQCNSRGT-VPGSSPCDSSSGTCFCKRLVTGHGCDRCLPGH 512
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G + GCR CDC+ G ++ CD TG+C C+ + G+ CE+ PGY+
Sbjct: 513 WGLSHDLLGCRPCDCDV-GGALDPQCDEATGQCRCRQHMIGRRCEQVQPGYF 563
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 53 CELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG-- 109
C+ G G C+CN + C G C C D+T G+HC+ C AG +G+ G
Sbjct: 865 CQRGQWGFPNCRPCVCNGRADECDTHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQ 924
Query: 110 CRKCDCNSHGNSVLGVCDSITGE-------CICQDNTQGKNCERCLPGYYGDPTD-GGTC 161
CR C C S S + C C++ G CE C PG++GDP+ GG C
Sbjct: 925 CRPCPCPEGPGSQRHFATSCHRDGYSQQIVCQCREGYTGLRCEACAPGHFGDPSKPGGRC 984
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
C G+ P +C+L +CS N + C G C C T G HC YC+
Sbjct: 969 CAPGHFGDPSKPGGRCQL----CECSGNIDPMDPDACDPHTGQCLRCLHNTEGPHCGYCK 1024
Query: 98 AGSYGNATTQEGCRKCDCNSHG-------NSVLGVCDSITGECICQDNTQGKNCERCLPG 150
G +G A Q C +C CN G ++ L CD TG+C C + QG NC+ C P
Sbjct: 1025 PGFHGQAARQS-CHRCTCNLLGTDPRRCPSTDLCHCDPSTGQCPCLPHVQGLNCDHCAPN 1083
Query: 151 YY 152
++
Sbjct: 1084 FW 1085
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 39/176 (22%)
Query: 8 SGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCK---------GPPDYSCQCELGWT 58
GL +K C LL+ + ++L YN + C P C+C+ G
Sbjct: 753 EGLMPSKAPLSETCAPLLISV--SALIYNGALPCQCDPQGSLSSECSPHGGQCRCKPGVV 810
Query: 59 GVDCSV--------------NCLCNN----HSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
G C V C C+ + C G C C G C +C+ G
Sbjct: 811 GRRCDVCATGYYGFGPAGCQACQCSPDGALSALCEGTSGQC-PCRPGAFGLRCDHCQRGQ 869
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
+G CR C CN + CD+ TG C+ C+D T G++CERC+ G++GDP
Sbjct: 870 WGFPN----CRPCVCNGRADE----CDTHTGACLGCRDYTGGEHCERCIAGFHGDP 917
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 20/62 (32%)
Query: 109 GCRKCDCNSH--------------GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
CRKC+CN H GN GVCD CQ NT G++CE C P +Y D
Sbjct: 346 ACRKCECNGHTHSCHFDMAVYLASGNVSGGVCDG------CQHNTAGRHCEFCRPFFYRD 399
Query: 155 PT 156
PT
Sbjct: 400 PT 401
Score = 38.9 bits (89), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQGK 142
C G +C +C A ++ N T+ GC+ C C H + G C+ TG+C C G+
Sbjct: 1068 CLPHVQGLNCDHC-APNFWNFTSGRGCQPCAC--HPSRARGPTCNEFTGQCHCHAGFGGR 1124
Query: 143 NCERCLPGYYGDP 155
C C Y+GDP
Sbjct: 1125 TCSECQELYWGDP 1137
Score = 36.2 bits (82), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 73 TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
TC G C CH G C C+ +G+ Q CR CDC+ G C TG
Sbjct: 1107 TCNEFTGQC-HCHAGFGGRTCSECQELYWGDPGLQ--CRACDCDPRGIDK-PQCHRSTGH 1162
Query: 133 CICQDNTQGKNCERCLPGYYG 153
C C+ G C++C G+ G
Sbjct: 1163 CSCRPGVSGVRCDQCARGFSG 1183
>sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus GN=Lamb3 PE=2 SV=2
Length = 1168
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 65 NCLCNNHSTCVH------------GIGICDECHDWTTGDHCQYCRAGSYGN----ATTQE 108
C CN HS H G+CD C D T G +C+ C+ + N A E
Sbjct: 312 RCDCNGHSETCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNRRPSAPIHE 371
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C C+C+ G CD +TG+C+C++ QG+ C+ C PG+ G
Sbjct: 372 TCIPCECDPDGAVQGAPCDRLTGQCVCKEYVQGERCDLCKPGFTG 416
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 84 CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C ++ G+ C C+ G G +GC CDC+ G C+ TG C+C N G
Sbjct: 398 CKEYVQGERCDLCKPGFTGLTFANPKGCHACDCSILGARKDMPCEEETGRCLCLPNVVGP 457
Query: 143 NCERCLPGYY 152
C++C P ++
Sbjct: 458 KCDQCAPSHW 467
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
+ C +YG+ T GCR CDC+ G G CD +G C+C+ G C++C G+
Sbjct: 514 RQCPDQTYGHVAT--GCRACDCDFRGTEGPG-CDKASGRCLCRPGFTGPRCDQCQRGH 568
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 40/134 (29%)
Query: 65 NCLCNNHS-----------TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ--EG-- 109
+C C+ H+ T V +C C T G +C C A Y N + EG
Sbjct: 249 SCFCHGHADRCAPNPGGSTTAVQVNNVC-VCQHNTAGPNCDRC-APFYNNRPWRPAEGQD 306
Query: 110 ---CRKCDCNSHGN------SVL--------GVCDSITGECICQDNTQGKNCERCLPGYY 152
C++CDCN H +V GVCD+ C+D+T+GKNCERC Y+
Sbjct: 307 THECQRCDCNGHSETCHFDPAVFAASQGTNGGVCDN------CRDHTEGKNCERCQLHYF 360
Query: 153 GDPTDGGTCYYQCM 166
+ + C+
Sbjct: 361 RNRRPSAPIHETCI 374
>sp|Q8JHV6|LAMB4_DANRE Laminin subunit beta-4 OS=Danio rerio GN=lamb4 PE=2 SV=1
Length = 1827
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGK 142
C D TG C C G YG CR+C CN + +CD ITG+C+ C++++ G+
Sbjct: 922 CRDGITGLQCNRCYPGYYGFPL----CRRCQCNR----LADICDPITGDCLDCREHSAGR 973
Query: 143 NCERCLPGYYGDPTDGGTC 161
NCERC GY GDP G C
Sbjct: 974 NCERCEEGYVGDPVSGQPC 992
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 56 GWTGVDCSVNCLCNNHSTCVH----------GI--GICDECHDWTTGDHCQYCRAGSYGN 103
G D C C++HS H G+ G+CD+C + G C+ C Y +
Sbjct: 324 GKADSDVCKRCNCHSHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQD 383
Query: 104 ATTQE----GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTD 157
C CDC+ G+ G+CD + G+C+C+ N +G+ C+RC G+YG D
Sbjct: 384 PQRSVDDPYACIPCDCDLDGSVDRGLCDPVNGQCVCKQNIEGERCDRCKVGFYGFSRD 441
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 72 STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG 131
S+C G C +C G C C +YG GC CDC+ G S +CD TG
Sbjct: 863 SSCSKFGGQC-QCKPNVIGRCCDSCAPLTYGLGPN--GCSPCDCDRSG-STTELCDQTTG 918
Query: 132 ECICQDNTQGKNCERCLPGYYGDP 155
+C C+D G C RC PGYYG P
Sbjct: 919 QCSCRDGITGLQCNRCYPGYYGFP 942
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
Query: 66 CLCNNH------STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHG 119
C CNN+ C G C C T G CQ C+ G YGNA Q+ C++C C+ G
Sbjct: 1054 CCCNNNIDPRDGDACDPVTGECLRCLHNTEGPRCQSCKRGYYGNALAQD-CKECSCDRRG 1112
Query: 120 NSVLG-------VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
CD TG+C C+ QG C C GY+ D G
Sbjct: 1113 TDDSKCPAGSPCFCDQDTGQCPCRPGVQGALCNECDDGYWNMDGDYG 1159
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLG-VCDSITGECI-CQDNT 139
EC TG C C G YG+ G C++C CN++ + G CD +TGEC+ C NT
Sbjct: 1023 ECLPGHTGPQCDSCSPGFYGDLRLPGGRCKECCCNNNIDPRDGDACDPVTGECLRCLHNT 1082
Query: 140 QGKNCERCLPGYYGD 154
+G C+ C GYYG+
Sbjct: 1083 EGPRCQSCKRGYYGN 1097
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C + G C C G +G T GC CDC+ G ++ C S+ G+C C+ N G+
Sbjct: 472 CEHFAYGSQCDQCLPGYWGLGNTVYGCIPCDCDI-GGALKTECSSVDGQCKCRPNMVGQK 530
Query: 144 CERCLPGYYGDPTD 157
C PGY+ P D
Sbjct: 531 CNDPAPGYFLAPLD 544
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C G C C G Y N GC+ C+CN +++ +CD ITG+C+CQ G+
Sbjct: 1135 CRPGVQGALCNECDDG-YWNMDGDYGCQPCNCNRE-HALNYICDKITGQCLCQPEYGGRI 1192
Query: 144 CERCLPGYYGDP 155
C+ C P ++G+P
Sbjct: 1193 CDECGPNHFGNP 1204
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 54/127 (42%), Gaps = 27/127 (21%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIG-ICDE------C 84
+LC N+C GY DY CQ C CN H + ICD+ C
Sbjct: 1142 ALC-NECDDGYWNMDGDYGCQ------------PCNCNRE----HALNYICDKITGQCLC 1184
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
G C C +GN Q C CDCN G +V CD+ TGEC+C+ G C
Sbjct: 1185 QPEYGGRICDECGPNHFGNPDLQ--CMFCDCNLEG-TVHPACDAYTGECLCKPGVTGPFC 1241
Query: 145 ERCLPGY 151
+ C PG+
Sbjct: 1242 DECAPGH 1248
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
Query: 52 QCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGC 110
+C G+ G C CN + C G C +C + + G +C+ C G G+ + + C
Sbjct: 933 RCYPGYYGFPLCRRCQCNRLADICDPITGDCLDCREHSAGRNCERCEEGYVGDPVSGQPC 992
Query: 111 RKC---DCNSHGNSVLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGD 154
C D N G C D +G C C G C+ C PG+YGD
Sbjct: 993 EPCLCPDLNGSGRFFAFSCNKDPRSGAPYCECLPGHTGPQCDSCSPGFYGD 1043
Score = 35.0 bits (79), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 29/112 (25%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRAGSY------GNATTQEGCRKCDCNSH---------- 118
VHG +C H+ T G +C+ C+ + G + C++C+C+SH
Sbjct: 293 VHGRCVCQ--HN-TAGYNCERCQDFYHDAPWRPGGKADSDVCKRCNCHSHSEKCHFELAR 349
Query: 119 ----GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
G GVCD C++N G CE C P YY DP Y C+
Sbjct: 350 YLATGGVSGGVCDD------CRNNRIGPQCELCGPFYYQDPQRSVDDPYACI 395
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 10/53 (18%)
Query: 113 CDCNSHGNSVLGV----CDSIT------GECICQDNTQGKNCERCLPGYYGDP 155
C CN H + + V D+ T G C+CQ NT G NCERC Y+ P
Sbjct: 267 CFCNGHASQCIPVDGARGDTFTEPGMVHGRCVCQHNTAGYNCERCQDFYHDAP 319
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 37 KCIYGYCKGP--PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
+C GY P P SCQ +D S+ C++ S G C C TTG +C+
Sbjct: 846 RCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLS------GSCLICKPGTTGRYCE 899
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C G +G+A + C+ C CN+ G S VC S TG+C C+ N QG+ C++C G +G
Sbjct: 900 LCADGYFGDAVDAKNCQPCRCNA-GGSFSEVCHSQTGQCECRANVQGQRCDKCKAGTFG 957
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 110 CRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDG 158
C C C H S CD +TGEC+ C+D+T G C++CLPG+YG+PT G
Sbjct: 754 CEPCQCFGHAES----CDDVTGECLNCKDHTGGPYCDKCLPGFYGEPTKG 799
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 64/165 (38%), Gaps = 45/165 (27%)
Query: 50 SCQCELGWTGVDCS-------------------------VNCLCNNHST-CVHGIGICDE 83
C C LG++G+ C V C CN HS+ C IC
Sbjct: 1379 KCDCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCVPCQCNGHSSLCDPETSICQN 1438
Query: 84 CHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDCNSHGNSVLGVCDSITGECI-------- 134
C T GD C+ C G YG C++C C ++ ++ + C+
Sbjct: 1439 CQHHTAGDFCERCALGYYGIVKGLPNDCQQCAC-----PLISSSNNFSPSCVAEGLDDYR 1493
Query: 135 ---CQDNTQGKNCERCLPGYYGDPTD-GGTCYY-QCMARGMLTGP 174
C +G+ CERC PGY G P + GG+C +C G L P
Sbjct: 1494 CTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVP 1538
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 58/145 (40%), Gaps = 40/145 (27%)
Query: 51 CQCELGWTGVDCS--------VN----------CLCNNHS-TCVHGIGICDECHDWTTGD 91
CQC G+TG C VN C C H+ +C G C C D T G
Sbjct: 724 CQCPPGYTGSSCESCWPRHRRVNGTIFGGICEPCQCFGHAESCDDVTGECLNCKDHTGGP 783
Query: 92 HCQYCRAGSYGNAT--TQEGCRKCDC-----------NSHGNSVLG-VCDSITGECICQD 137
+C C G YG T T E C+ C C H + LG +CD C
Sbjct: 784 YCDKCLPGFYGEPTKGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDG------CPV 837
Query: 138 NTQGKNCERCLPGYYGDPT-DGGTC 161
G CERC GY+G P+ GG+C
Sbjct: 838 GYTGPRCERCAEGYFGQPSVPGGSC 862
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 52 QCELGWTGVDCSVNCL-CNNHSTCVHGIGICDE-----CHDWTTGDHCQYCRAGSYGNAT 105
+C+ G G+ + C+ CN +S C+E C TG C C G +
Sbjct: 950 KCKAGTFGLQSARGCVPCNCNSFGSKSFD-CEESGQCWCQPGVTGKKCDRCAHGYFN--F 1006
Query: 106 TQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+ GC C+C+ GN+ CD TG CIC NT G+ C +C P +G
Sbjct: 1007 QEGGCTACECSHLGNN----CDPKTGRCICPPNTIGEKCSKCAPNTWG 1050
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGI----CDECHDWTTGDHCQY 95
YG KG P+ QC C + NN S G+ C C G +C+
Sbjct: 1456 YGIVKGLPNDCQQCA-------CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCER 1508
Query: 96 CRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
C G G+ G C++C+C+ +G S+ CD +TG C C+ G+ C+ C
Sbjct: 1509 CAPGYTGSPGNPGGSCQECECDPYG-SLPVPCDPVTGFCTCRPGATGRKCDGC 1560
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 14/79 (17%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS---------ITGECI 134
CH +G C C G + C CDC G CDS TG+C
Sbjct: 1081 CHPKFSGAKCTECSRGHWNYPR----CNLCDCFLPGTDAT-TCDSETKKCSCSDQTGQCT 1135
Query: 135 CQDNTQGKNCERCLPGYYG 153
C+ N +G +C+RC PG +G
Sbjct: 1136 CKVNVEGIHCDRCRPGKFG 1154
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 110 CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ C+C+ G+ C G CIC++N +G +C RC G++
Sbjct: 466 CKACNCSGLGSKNEDPC---FGPCICKENVEGGDCSRCKSGFF 505
>sp|Q5RB89|NET4_PONAB Netrin-4 OS=Pongo abelii GN=NTN4 PE=2 SV=1
Length = 628
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 21/109 (19%)
Query: 66 CLCNNHSTCVH------------GIGICDECHDWTTGDHCQYCRAGSYGNA----TTQEG 109
C CN H+ H G+CD+C T G HCQ C+ G Y + + +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 110 CRKCDCNSHGNSVLGV-----CDSITGECICQDNTQGKNCERCLPGYYG 153
C+ C C+ G++VL CD G+C C+ G++C+RC+ GY+G
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWG 440
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 31/102 (30%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRA--------GSYGNATTQEGCRKCDCNSH-------- 118
VHG +C H+ T G HCQ+C + G CR C CN H
Sbjct: 289 VHGKCMCK--HN-TAGSHCQHCAPLYNDQPWEAADGKTGAPNECRTCKCNGHADTCHFDV 345
Query: 119 ------GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
GN GVCD CQ NT+G++C+RC PG+Y D
Sbjct: 346 NVWEASGNRSGGVCDD------CQHNTEGQHCQRCKPGFYRD 381
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
C G HC C G +G GCR CDC G CD ITG+CI
Sbjct: 422 CKPGVAGRHCDRCMVGYWGFG--DYGCRPCDC-------AGSCDPITGDCI 463
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 11/58 (18%)
Query: 113 CDCNSHGNSVL-----------GVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
C CN H + + G + G+C+C+ NT G +C+ C P Y P +
Sbjct: 262 CFCNGHADQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGSHCQHCAPLYNDQPWEAA 319
>sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila melanogaster GN=LanB2 PE=2
SV=2
Length = 1639
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 55 LGWTGVDCSVNCLCNNHSTCVH---GIGICDECHDWTTGDHCQYCRAGSYGNATTQEG-- 109
LG T DC C C N C+ IC EC G C+ C G +G+ T G
Sbjct: 783 LGGTPNDCK-RCPCPNDGACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEV 841
Query: 110 --CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
C+ CDCN + + + +G C+ TGEC+ C NT G++C++CL G++GDP
Sbjct: 842 QTCKSCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHCDQCLSGHFGDP 891
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGN--ATTQEGCRKCDCNSH 118
DC+ N N C G C +C T G+HC C +G +G+ A C +C C
Sbjct: 848 DCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEA 907
Query: 119 G----NSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
G + CD +TG+C C+ N G++C C PGY+
Sbjct: 908 GTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYF 945
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C + G C+ C G Y ++ + G C CDC+ H + +CDS TG CICQ NT
Sbjct: 712 CPEGYLGQFCESCAPG-YRHSPARGGPFMPCIPCDCHGHAD----ICDSETGRCICQHNT 766
Query: 140 QGKNCERCLPGYYGDPTDGGT 160
G NC++C G+YG+ GGT
Sbjct: 767 HGDNCDQCAKGFYGNAL-GGT 786
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 63 SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN-S 121
S + CN+H C +C TGD C C Y GC++C C+S G+
Sbjct: 421 SRSLQCNSHGKC--------QCKPGVTGDKCDRCDNNYYQFGP--HGCQQCGCDSGGSHQ 470
Query: 122 VLGVCDSITGECICQDNTQGKNCERCLPGYY 152
CD+ TG C C++N +G+ C C PG++
Sbjct: 471 NTPACDTETGICFCKENVEGRRCNECKPGFF 501
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 52/121 (42%), Gaps = 24/121 (19%)
Query: 51 CQCELGWTGVDCSV---------------NCLCNN----HSTCVHGIGICDECHDWTTGD 91
CQC+ G DC NCLC+ +STC G C C G
Sbjct: 926 CQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQC-HCRPGVMGQ 984
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
C C YG ++ EGC+ C+C+ G+ CD G+C C DN +G+ C+RC
Sbjct: 985 RCDQCENYFYGFSS--EGCKPCECDESGSKGF-QCDQ-NGQCPCNDNVEGRRCDRCKENK 1040
Query: 152 Y 152
Y
Sbjct: 1041 Y 1041
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGN 120
+ C C+ H+ C G C C T GD+C C G YGNA T C++C C + G
Sbjct: 742 IPCDCHGHADICDSETGRCI-CQHNTHGDNCDQCAKGFYGNALGGTPNDCKRCPCPNDG- 799
Query: 121 SVLGVCDSITGECI----CQDNTQGKNCERCLPGYYGDPT 156
C I + + C G CE+C G++GDPT
Sbjct: 800 ----ACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPT 835
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 72 STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG 131
+ C G C +C G C C+ G Y N + GC C C+ G S CD +G
Sbjct: 917 TRCDQVTGQC-QCKPNVIGRDCGECQPG-YFNIRSGNGCENCLCDPVG-SYNSTCDRYSG 973
Query: 132 ECICQDNTQGKNCERCLPGYYGDPTDG 158
+C C+ G+ C++C +YG ++G
Sbjct: 974 QCHCRPGVMGQRCDQCENYFYGFSSEG 1000
>sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=2
Length = 5193
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 64 VNCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCN 116
+ C C T V+G CD+ C TG C C+ + +GC+ CDC+
Sbjct: 842 LTCNCEKMGT-VNGSLRCDKSTGQCPCKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCD 900
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
S G +CD I+G+C+C + QG+ CE+C PG+Y P++ C
Sbjct: 901 SLGTLPGSMCDPISGQCLCLPHRQGRRCEQCQPGFYSSPSNATGC 945
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSY----GNATTQEGCRKCDCN 116
D SV+ H+ G G+CD+C TTG HC+ C+ Y + + C+ CDCN
Sbjct: 584 DASVDPFPLEHNRG--GGGVCDDCQHHTTGRHCESCQDYFYRPVGADPAAPDACKLCDCN 641
Query: 117 SHGNSVLGV-CDSITGECICQDNTQGKNCERCLPGYY 152
G + CD I G+C C+ G+ C +C G+Y
Sbjct: 642 RAGTRNGSLHCDPIGGQCDCKRRVSGRQCLQCQDGFY 678
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGC 110
CQC L SVN LC+ S G C C G C CR YG C
Sbjct: 744 CQCNL-----HGSVNQLCDPLS------GQC-ACKKEAKGLKCDSCRENFYG--LPWSAC 789
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
CDC+ G+ VCD+ TG+C+C+ N G+ C +C GY+
Sbjct: 790 EVCDCSKAGSQPGTVCDTETGQCVCKPNVGGRQCSQCKAGYF 831
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 66 CLCNNHSTCVHGIGICDE------CHD-WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
CLC+ H IC+ CHD TTG C C+ + CR C C+
Sbjct: 948 CLCHTAGAVSH---ICNSVTGQCSCHDPSTTGRSCHQCQESYFRFDPLTGRCRPCHCHVA 1004
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
G S G CD++TG+C C++ G C+ C+PG
Sbjct: 1005 GASN-GTCDAVTGQCFCKEFVTGSKCDTCVPG 1035
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD-NTQGKNCERCL 148
G C+ C+ G Y + + GC C C++ G +V +C+S+TG+C C D +T G++C +C
Sbjct: 925 GRRCEQCQPGFYSSPSNATGCLPCLCHTAG-AVSHICNSVTGQCSCHDPSTTGRSCHQCQ 983
Query: 149 PGYYG-DPTDG 158
Y+ DP G
Sbjct: 984 ESYFRFDPLTG 994
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAG-SYGNATTQEGCRKCDCNSHG 119
+C+ + + TC G C C G C C G + + +GC C CN HG
Sbjct: 692 NCNPSGTVDGDITCHQNSGQCS-CKANVIGLRCNRCNFGFKFLQSFNGDGCEPCQCNLHG 750
Query: 120 NSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
SV +CD ++G+C C+ +G C+ C +YG P
Sbjct: 751 -SVNQLCDPLSGQCACKKEAKGLKCDSCRENFYGLP 785
>sp|Q06561|UNC52_CAEEL Basement membrane proteoglycan OS=Caenorhabditis elegans GN=unc-52
PE=1 SV=2
Length = 3375
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 65 NCLCNNH-STCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-------TQEGCRK-CDC 115
C CN H S C G C +C T GD C+ C+ G G+A E R C C
Sbjct: 954 KCECNGHASQCDKEYGYCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHC 1013
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDG 158
N+H S G CDS +C+ NT+G +CERC GYYGD T G
Sbjct: 1014 NNH--SPRG-CDSFGRCLLCEHNTEGTHCERCKKGYYGDATKG 1053
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 66 CLCNNHSTCV-HGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSV 122
C CNNHS G C C T G HC+ C+ G YG+AT + C C C +
Sbjct: 1011 CHCNNHSPRGCDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGASDCY 1070
Query: 123 LGVCDSITGECICQDNTQGKNCERCLPGY 151
L + IC QG+ C C PGY
Sbjct: 1071 LDNEGQVACR-ICPAGLQGRLCNECAPGY 1098
>sp|P55268|LAMB2_HUMAN Laminin subunit beta-2 OS=Homo sapiens GN=LAMB2 PE=1 SV=2
Length = 1798
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 14/112 (12%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQ----EGCRKCDCNSHGNSVLGVCDS------ 128
G+CD C T G HC+ CR Y + T CR CDC+ G+ G CDS
Sbjct: 372 GVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPAVCRSCDCDPMGSQDGGRCDSHDDPAL 431
Query: 129 --ITGECICQDNTQGKNCERCLPGYYG-DPTDGGTCYY-QCMARGMLTGPGP 176
++G+C C+++ G C++C G++G +D C QC ARG + G P
Sbjct: 432 GLVSGQCRCKEHVVGTRCQQCRDGFFGLSISDRLGCRRCQCNARGTVPGSTP 483
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 68 CNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYGNATTQE-GCRKCDCNSHGNSVLG 124
C++H G+ G C C + G CQ CR G +G + + GCR+C CN+ G +V G
Sbjct: 423 CDSHDDPALGLVSGQC-RCKEHVVGTRCQQCRDGFFGLSISDRLGCRRCQCNARG-TVPG 480
Query: 125 V--CDSITGECICQDNTQGKNCERCLPGYYG 153
CD +G C C+ G+ C+RCLPG++G
Sbjct: 481 STPCDPNSGSCYCKRLVTGRGCDRCLPGHWG 511
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 52 QCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG- 109
+C+ G G C+CN H+ C G C C D T G+HC+ C AG +G+ G
Sbjct: 863 RCQRGQWGFPSCRPCVCNGHADECNTHTGACLGCRDHTGGEHCERCIAGFHGDPRLPYGG 922
Query: 110 -CRKCDCNSHGNSVLGVCDSITGE-------CICQDNTQGKNCERCLPGYYGDPTD-GGT 160
CR C C S S + C C+ G CE C PG++GDP+ GG
Sbjct: 923 QCRPCPCPEGPGSQRHFATSCHQDEYSQQIVCHCRAGYTGLRCEACAPGHFGDPSRPGGR 982
Query: 161 C 161
C
Sbjct: 983 C 983
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
C G+ P +C+L +CS N + C G C C T G HC +C+
Sbjct: 968 CAPGHFGDPSRPGGRCQL----CECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHCAHCK 1023
Query: 98 AGSYGNATTQEGCRKCDCNSHGNSVLGV-------CDSITGECICQDNTQGKNCERCLPG 150
G +G A Q C +C CN G + CD +G+C C N QG +C+RC P
Sbjct: 1024 PGFHGQAARQ-SCHRCTCNLLGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPN 1082
Query: 151 YY 152
++
Sbjct: 1083 FW 1084
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 52 QCELGWTGVDCS-----VNCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGS 100
QC G+ G+ S C CN T V G CD C TG C C G
Sbjct: 451 QCRDGFFGLSISDRLGCRRCQCNARGT-VPGSTPCDPNSGSCYCKRLVTGRGCDRCLPGH 509
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G + GCR CDC+ G ++ CD TG+C C+ + G+ CE+ PGY+
Sbjct: 510 WGLSHDLLGCRPCDCDV-GGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGYF 560
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 39/175 (22%)
Query: 9 GLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCK---------GPPDYSCQCELGWTG 59
GL +K C LL+ + ++L YN + C P C C+ G G
Sbjct: 753 GLVPSKTSPSEACAPLLISL--STLIYNGALPCQCNPQGSLSSECNPHGGQCLCKPGVVG 810
Query: 60 VDCSV--------------NCLCNNH----STCVHGIGICDECHDWTTGDHCQYCRAGSY 101
C + C C++ S C G C C G C C+ G +
Sbjct: 811 RRCDLCAPGYYGFGPTGCQACQCSHEGALSSLCEKTSGQC-LCRTGAFGLRCDRCQRGQW 869
Query: 102 GNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
G + CR C CN H + C++ TG C+ C+D+T G++CERC+ G++GDP
Sbjct: 870 GFPS----CRPCVCNGHADE----CNTHTGACLGCRDHTGGEHCERCIAGFHGDP 916
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 53/129 (41%), Gaps = 49/129 (37%)
Query: 65 NCLCNNHST--------------CVHGIGICDECHDWTTGDHCQYC---------RAGSY 101
NC C H++ VHG IC H+ T G +C+ C R
Sbjct: 282 NCFCYGHASECAPAPGAPAHAEGMVHGACICK--HN-TRGLNCEQCQDFYRDLPWRPAED 338
Query: 102 GNATTQEGCRKCDCNSH--------------GNSVLGVCDSITGECICQDNTQGKNCERC 147
G++ CRKC+C+ H GN GVCD CQ NT G++CE C
Sbjct: 339 GHS---HACRKCECHGHTHSCHFDMAVYLASGNVSGGVCDG------CQHNTAGRHCELC 389
Query: 148 LPGYYGDPT 156
P +Y DPT
Sbjct: 390 RPFFYRDPT 398
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCL 148
G C C A ++ N T+ GC+ C C H + G C+ TG+C C+ G+ C C
Sbjct: 1073 GPSCDRC-APNFWNLTSGHGCQPCAC--HPSRARGPTCNEFTGQCHCRAGFGGRTCSECQ 1129
Query: 149 PGYYGDPTDGGTCYY-QCMARGMLT 172
++GDP G C+ C +RG+ T
Sbjct: 1130 ELHWGDP--GLQCHACDCDSRGIDT 1152
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 73 TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
TC G C C G C C+ +G+ Q C CDC+S G C TG
Sbjct: 1106 TCNEFTGQC-HCRAGFGGRTCSECQELHWGDPGLQ--CHACDCDSRGIDT-PQCHRFTGH 1161
Query: 133 CICQDNTQGKNCERCLPGYYG 153
C C+ G C++C G+ G
Sbjct: 1162 CSCRPGVSGVRCDQCARGFSG 1182
>sp|Q9Y6N6|LAMC3_HUMAN Laminin subunit gamma-3 OS=Homo sapiens GN=LAMC3 PE=1 SV=3
Length = 1575
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT---QEGCRKCDCNS 117
CS N N C G C C TTGDHC++C+ G YG+A + C C C+
Sbjct: 811 QCSGNVDPNAVGNCDPLSGHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHP 870
Query: 118 HGN-SVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
G+ S CD +TG+C C + ++C RC PG++
Sbjct: 871 QGSVSEQMPCDPVTGQCSCLPHVTARDCSRCYPGFF 906
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 89 TGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
TG C+ C G Y Q G C C CN HG CD TG C+C +T+G +C
Sbjct: 680 TGQFCESCAPG-YKREMPQGGPYASCVPCTCNQHG-----TCDPNTGICVCSHHTEGPSC 733
Query: 145 ERCLPGYYGDPTDG 158
ERCLPG+YG+P G
Sbjct: 734 ERCLPGFYGNPFAG 747
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 76/194 (39%), Gaps = 51/194 (26%)
Query: 3 IIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCK--------GPP---DYSC 51
++ + L T DD VL Y + S + + G CK GP +C
Sbjct: 234 LLISLDRLNTFGDDIFKDPKVLQSYYYAVS---DFSVGGRCKCNGHASECGPDVAGQLAC 290
Query: 52 QCELGWTGVDCS----------------------VNCLCNNHS-----------TCVHGI 78
+C+ TG DC + C C+ S + HG
Sbjct: 291 RCQHNTTGTDCERCLPFFQDRPWARGTAEAAHECLPCNCSGRSEECTFDRELFRSTGHG- 349
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
G C C D T G HC+ C+ Y + + C+ CDC S G+ L CD TG C C+
Sbjct: 350 GRCHHCRDHTAGPHCERCQENFY-HWDPRMPCQPCDCQSAGSLHL-QCDD-TGTCACKPT 406
Query: 139 TQGKNCERCLPGYY 152
G C+RCLPG++
Sbjct: 407 VTGWKCDRCLPGFH 420
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 63 SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV 122
S++ C++ TC C TG C C G + + ++ GCR C CN G+
Sbjct: 390 SLHLQCDDTGTCA--------CKPTVTGWKCDRCLPGFH--SLSEGGCRPCTCNPAGS-- 437
Query: 123 LGVCDSITGECICQDNTQGKNCERCLPGYY 152
L CD +G C C++N +G C+RC PG +
Sbjct: 438 LDTCDPRSGRCPCKENVEGNLCDRCRPGTF 467
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 47 PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGN--A 104
P Y + G C V C CN H TC GIC C T G C+ C G YGN A
Sbjct: 689 PGYKREMPQGGPYASC-VPCTCNQHGTCDPNTGIC-VCSHHTEGPSCERCLPGFYGNPFA 746
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
+ C+ C C ++ + +S C C +G+ CE C G++GDP
Sbjct: 747 GQADDCQPCPCPGQ-SACTTIPESREVVCTHCPPGQRGRRCEVCDDGFFGDP 797
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI 134
+C C G C+ C G +G+ G C +C C+ + + + +G CD ++G C+
Sbjct: 773 VCTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQCSGNVDPNAVGNCDPLSGHCL 832
Query: 135 -CQDNTQGKNCERCLPGYYG 153
C NT G +CE C G+YG
Sbjct: 833 RCLHNTTGDHCEHCQEGFYG 852
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C T C C G + + GCR C C+ G S C TG+C C+ G+
Sbjct: 889 CLPHVTARDCSRCYPGFF-DLQPGRGCRSCKCHPLG-SQEDQCHPKTGQCTCRPGVTGQA 946
Query: 144 CERCLPGYYG 153
C+RC G++G
Sbjct: 947 CDRCQLGFFG 956
Score = 35.4 bits (80), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
++C G+ P C+ C + L + C G C C TG C
Sbjct: 899 SRCYPGFFDLQPGRGCR--------SCKCHPLGSQEDQCHPKTGQCT-CRPGVTGQACDR 949
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ G +G + +GCR C C+ G + ++ G C+C+ +G C+RC ++
Sbjct: 950 CQLGFFGFSI--KGCRACRCSPLGAASAQCHEN--GTCVCRPGFEGYKCDRCHDNFF 1002
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 112 KCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERCLPGYYGDPTDGGT 160
+C CN H + + G+ C CQ NT G +CERCLP + P GT
Sbjct: 270 RCKCNGHASEC---GPDVAGQLACRCQHNTTGTDCERCLPFFQDRPWARGT 317
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN 120
+CS N + +C G C C + T G C C G YG+A + C+ CDC+ G
Sbjct: 1918 ECSGNINPEDQGSCDTRTGECLRCLNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGT 1977
Query: 121 SVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
CD G C C +N G C+RC P +YG
Sbjct: 1978 Q---TCDPFVGVCTCHENVIGDRCDRCKPDHYG 2007
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDC--NSH 118
+ C CN HS TC GIC +C T GDHC+ C +G YGNAT T C C C
Sbjct: 1807 IPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFD 1866
Query: 119 GNSVLGVCD-SITGE---CICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGP 174
N+ C+ S +G+ C C+ G CE C G+YG+P G C G + P
Sbjct: 1867 SNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNIN-P 1925
Query: 175 GPQG 178
QG
Sbjct: 1926 EDQG 1929
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 73 TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
TC +G+C CH+ GD C C+ YG + GCR CDC + NS CD TG
Sbjct: 1979 TCDPFVGVC-TCHENVIGDRCDRCKPDHYG-FESGVGCRACDCGAASNSTQ--CDPHTGH 2034
Query: 133 CICQDNTQGKNCERCLPGYYGDPTDG 158
C C+ G+ C+RC ++ DG
Sbjct: 2035 CACKSGVTGRQCDRCAVDHWKYEKDG 2060
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 16/121 (13%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
+ C YGY P C+C L T +C + C C G +C+
Sbjct: 433 DSCAYGYYGYPNCRECECNLNGTN---GYHCEAESGQQC--------PCKINFAGAYCKQ 481
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C G YG C+ C+CN G S+ C+ TGEC C N G NCERC GY+ P
Sbjct: 482 CAEGYYGFPE----CKACECNKIG-SITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYP 536
Query: 156 T 156
T
Sbjct: 537 T 537
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICD-ECHDWTT--GDHCQYCRAGSYGNAT 105
Y QC G+ G C CN + + + EC T GD+C+ C+ G + T
Sbjct: 478 YCKQCAEGYYGFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPT 537
Query: 106 TQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C CDC++ G +C+ +G+CIC++ G C++CLPG+Y P
Sbjct: 538 ----CSYCDCDNQGTES-EICNKQSGQCICREGFGGPRCDQCLPGFYNYP 582
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 83 ECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQ 140
+C + TG C C+ + N + EGC CDC + G S L C S +G+C C+ +TQ
Sbjct: 701 KCKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQ 760
Query: 141 GKNCERCLPGYY 152
G+ C+ C G +
Sbjct: 761 GRRCQECRDGTF 772
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 67 LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC 126
+ N +S C G C EC G C C G + C +C C+ G L VC
Sbjct: 1473 IANGNSQCDLFNGTC-ECRQNIEGRACDVCSNGYFNFPH----CEQCSCHKPGTE-LEVC 1526
Query: 127 DSITGECICQDNTQGKNCERCLPGYY 152
D I G C C+ N G++C++C+ G Y
Sbjct: 1527 DKIDGACFCKKNVVGRDCDQCVDGTY 1552
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 21/122 (17%)
Query: 36 NKCIYGYCKGPPDYSCQCE-LGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
++C+ G+ P C C G + + C CN C + G C
Sbjct: 572 DQCLPGFYNYPDCKPCNCSSTGSSAITCDNTGKCN--------------CLNNFAGKQCT 617
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
C AG Y + C C C+SHG+ GV + G+C+CQ N G+ C+ C G+Y
Sbjct: 618 LCTAGYY----SYPDCLPCHCDSHGSQ--GVSCNSDGQCLCQPNFDGRQCDSCKEGFYNF 671
Query: 155 PT 156
P+
Sbjct: 672 PS 673
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHG 119
DC + + TC G C C T G CQ CR G++ ++ + GC+ C C+ G
Sbjct: 733 DCWTDGTISALDTCTSKSGQC-PCKPHTQGRRCQECRDGTFDLDSASLFGCKDCSCDV-G 790
Query: 120 NSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
S VCD I+G+C C G C + L ++
Sbjct: 791 GSWQSVCDKISGQCKCHPRITGLACTQPLTTHF 823
Score = 38.5 bits (88), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 77 GIGICDECHDWTTGDHCQYCR------AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSIT 130
G G+C C T G +C C+ G + N T + C C C+ ++ G C+ T
Sbjct: 363 GGGVCQNCQHNTVGINCNKCKPKYYRPKGKHWNET--DVCSPCQCDYFFST--GHCEEET 418
Query: 131 GECICQDNTQGKNCERCLPGYYGDP 155
G C C+ Q +C+ C GYYG P
Sbjct: 419 GNCECRAAFQPPSCDSCAYGYYGYP 443
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C CR+ YG C+ C C NS + C+ TGEC+C N G CE+C P Y
Sbjct: 1405 CGACRSRYYGFP----DCKPCKC---PNSAM--CEPTTGECMCPPNVIGDLCEKCAPNTY 1455
Query: 153 G 153
G
Sbjct: 1456 G 1456
>sp|O00634|NET3_HUMAN Netrin-3 OS=Homo sapiens GN=NTN3 PE=2 SV=1
Length = 580
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNA----TTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
G+C C T G HC YCR G Y + + + CR CDC+ G + C+ TG+C
Sbjct: 336 GVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVG-AAGKTCNQTTGQCP 394
Query: 135 CQDNTQGKNCERCLPGY 151
C+D G C RC PG+
Sbjct: 395 CKDGVTGLTCNRCAPGF 411
Score = 35.8 bits (81), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 51/136 (37%), Gaps = 33/136 (24%)
Query: 46 PPDYSCQCELGWTGVDCSV--NCLCNNH-STCV---HGIGICDECHDWTTGDHCQYCRA- 98
P D + D V C CN H S C+ G ICD C T G C C+
Sbjct: 233 PRDMEAVVPYSYAATDLQVGGRCKCNGHASRCLLDTQGHLICD-CRHGTEGPDCGRCKPF 291
Query: 99 ---GSYGNATTQE--GCRKCDCNSH--------------GNSVLGVCDSITGECICQDNT 139
+ AT +E C C CN H G GVC + C+ NT
Sbjct: 292 YCDRPWQRATARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLN------CRHNT 345
Query: 140 QGKNCERCLPGYYGDP 155
G++C C G+Y DP
Sbjct: 346 AGRHCHYCREGFYRDP 361
>sp|Q80Z71|TENN_MOUSE Tenascin-N OS=Mus musculus GN=Tnn PE=1 SV=2
Length = 1560
Score = 58.5 bits (140), Expect = 8e-08, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 65/167 (38%), Gaps = 50/167 (29%)
Query: 36 NKCIYG------YCKG-----PPDYSCQCELGWTGVDC---SVNCLCNNHSTCVHGIGIC 81
N+C G +C G P SC C+ GW G DC + CN H CV G +C
Sbjct: 129 NRCCQGAADLSRHCSGHGTFLPETCSCHCDQGWEGADCDQPTCPGACNGHGRCVDGQCVC 188
Query: 82 DECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
D + G C Y C + DC+ HG V GVC C ++
Sbjct: 189 DAPY---VGVDCAYA------------ACPQ-DCSGHGVCVQGVCQ-------CHEDFTA 225
Query: 142 KNC--ERCLPGYYGDPTDGGTC-YYQCMARGMLTGP------GPQGL 179
++C +RC GD + G C +C TGP PQGL
Sbjct: 226 EDCSEQRCP----GDCSGNGFCDTGECYCEMGFTGPDCSQVVAPQGL 268
Score = 43.5 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+CP C + C++ QCVC G DC CP +C HG C
Sbjct: 170 TCPGACNGHGRCVDGQCVCDAPYVGVDCAYAACPQDCS---GHGVC 212
Score = 41.2 bits (95), Expect = 0.014, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 288 PSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
P G + Y +CP C + C+ C C T DC E+ CP +C +G CD
Sbjct: 191 PYVGVDCAYA--ACPQDCSGHGVCVQGVCQCHEDFTAEDCSEQRCPGDCS---GNGFCD 244
Score = 35.4 bits (80), Expect = 0.66, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICP 333
CP C N C +C C TGPDC + + P
Sbjct: 233 CPGDCSGNGFCDTGECYCEMGFTGPDCSQVVAP 265
>sp|Q9R1A3|NET3_MOUSE Netrin-3 OS=Mus musculus GN=Ntn3 PE=2 SV=1
Length = 580
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNA----TTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
G+C C T G HC YCR G Y + + + CR CDC+ G + C+ TG+C
Sbjct: 336 GVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRACRACDCHPVG-AAGKTCNQTTGQCP 394
Query: 135 CQDNTQGKNCERCLPGY 151
C+D G C RC PG+
Sbjct: 395 CKDGVTGLTCNRCAPGF 411
Score = 38.9 bits (89), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 47/115 (40%), Gaps = 31/115 (26%)
Query: 65 NCLCNNH-STCV---HGIGICDECHDWTTGDHCQYCRA----GSYGNATTQEG--CRKCD 114
C CN H S C+ HG +CD C T G C C+ + AT QE C C
Sbjct: 254 RCKCNGHASRCLLDTHGHLVCD-CQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLACS 312
Query: 115 CNSH--------------GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
CN H G GVC + C+ NT G++C C G+Y DP
Sbjct: 313 CNGHARRCRFNMELYRLSGRRSGGVCLN------CRHNTAGRHCHYCREGFYRDP 361
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 66/156 (42%), Gaps = 35/156 (22%)
Query: 43 CKGPPDY---SCQ-CELGWTGVDCSV------NCLCNNHS-TCVHGIGICDECHDWTTGD 91
C PP Y SCQ C+ G+T + C C+ HS C G C C T G
Sbjct: 1126 CSCPPGYRGPSCQDCDTGYTRTPSGLYLGTCERCSCHGHSEACEPETGACQGCQHHTEGP 1185
Query: 92 HCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSVLG--------------VCDSITGECIC 135
C+ C+ G YG+A T + C+ C C +G+ G CD+ C
Sbjct: 1186 RCEQCQPGYYGDAQRGTPQDCQLCPC--YGDPAAGQAAHTCFLDTDGHPTCDA------C 1237
Query: 136 QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGML 171
G++CERC PGYYG+P+ G C G +
Sbjct: 1238 SPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPI 1273
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 43 CKGPPDY---SCQ-CELGWTGVDCSVN------CLCNNHSTCVHG-IGICDECHDWTTGD 91
C+ PP Y SCQ C G+T + C CN HS H G C +C G+
Sbjct: 1530 CRCPPGYIGLSCQDCAPGYTRTGSGLYLGHCELCECNGHSDLCHPETGACSQCQHNAAGE 1589
Query: 92 HCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSITGE----CICQDNTQGKN 143
C+ C G YG+AT T E C+ C C + N C+S+ C+ G+
Sbjct: 1590 FCELCAPGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQY 1649
Query: 144 CERCLPGYYGDPT-DGGTC 161
CE+C PGY G+P+ GG C
Sbjct: 1650 CEQCGPGYVGNPSVQGGQC 1668
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 55/144 (38%), Gaps = 38/144 (26%)
Query: 51 CQCELGWTGVDCSV------------------NCLCNNH-STCVHGIGICDECHDWTTGD 91
C+C +G++G+ C C CN H S+C G C C T G
Sbjct: 731 CRCPIGYSGLSCESCDAHFTRVPGGPYLGTCSGCNCNGHASSCDPVYGHCLNCQHNTEGP 790
Query: 92 HCQYCRAGSYGNA--TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ--------- 140
C C+AG +G+A T CR C C + + C + Q
Sbjct: 791 QCNKCKAGFFGDAMKATATSCRPCPC-----PYIDASRRFSDTCFLDTDGQATCDACAPG 845
Query: 141 --GKNCERCLPGYYGDPTD-GGTC 161
G+ CE C PGY G+P GG C
Sbjct: 846 YTGRRCESCAPGYEGNPIQPGGKC 869
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRK---------CDCNSHGNSVLGVCDSITG 131
CD C +G HC+ C G YGN + + C++ C+C+ G SV CD+ G
Sbjct: 1234 CDACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQG-SVSSQCDA-AG 1291
Query: 132 ECICQDNTQGKNCERCLPGYY 152
+C C+ +G C C P ++
Sbjct: 1292 QCQCKAQVEGLTCSHCRPHHF 1312
>sp|Q9HB63|NET4_HUMAN Netrin-4 OS=Homo sapiens GN=NTN4 PE=2 SV=2
Length = 628
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 66 CLCNNHSTCVH------------GIGICDECHDWTTGDHCQYCRAGSYGNA----TTQEG 109
C CN H+ H G+CD+C T G +CQ C+ G Y + + +
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA 391
Query: 110 CRKCDCNSHGNSVLGV-----CDSITGECICQDNTQGKNCERCLPGYYG 153
C+ C C+ G++VL CD G+C C+ G+ C+RC+ GY+G
Sbjct: 392 CKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWG 440
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 31/102 (30%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRA--------GSYGNATTQEGCRKCDCNSH-------- 118
VHG +C H+ T G HCQ+C + G CR C CN H
Sbjct: 289 VHGKCMCK--HN-TAGSHCQHCAPLYNDRPWEAADGKTGAPNECRTCKCNGHADTCHFDV 345
Query: 119 ------GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
GN GVCD CQ NT+G+ C+RC PG+Y D
Sbjct: 346 NVWEASGNRSGGVCDD------CQHNTEGQYCQRCKPGFYRD 381
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 61 DCSVNCLCNN-HSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHG 119
DCS N N S C G C C TTG C+ C G YGNA C +CDC G
Sbjct: 1970 DCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCG 2029
Query: 120 NSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
CD +G C+C+ G+ C+RC G++G
Sbjct: 2030 TE---ACDPHSGHCLCKAGVTGRRCDRCQEGHFG 2060
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDC--NSHG 119
V C C+ HS C+ G G+C +C T G HC+ C+AG + C C C +
Sbjct: 1862 VPCQCHGHSDRCLPGSGVCVDCQHNTEGAHCERCQAGFVSSRDDPSAPCVSCPCPLSVPS 1921
Query: 120 NSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDP 155
N+ C G +C+C+ G +CERC PG++G+P
Sbjct: 1922 NNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNP 1959
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 76 HGIGICDECHDWTTGDHCQYCRAGSYGNAT----TQEGCRKCDCNSHGNSVLGVCDSITG 131
G G+C +C TTG +C+ C G Y + + CR+C+C S + G C+ +TG
Sbjct: 388 QGGGVCIDCQHHTTGVNCERCLPGFYRSPNHPLDSPHVCRRCNCES--DFTDGTCEDLTG 445
Query: 132 ECICQDNTQGKNCERCLPGYYGDPT 156
C C+ N G+ C+ C G+ G P+
Sbjct: 446 RCYCRPNFSGERCDVCAEGFTGFPS 470
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 73 TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
TC G C +C TG C C G +G CR CDC+ G + GVCD +TG+
Sbjct: 1542 TCDTDSGQC-KCRPNVTGRRCDTCSPGFHGYPR----CRPCDCHEAGTAP-GVCDPLTGQ 1595
Query: 133 CICQDNTQGKNCERCLPGYY 152
C C++N QG C++C G +
Sbjct: 1596 CYCKENVQGPKCDQCSLGTF 1615
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C G HC+ C G YG GC+ C C+S G + CD TG+C C+ +G
Sbjct: 517 CKPNFQGTHCELCAPGFYG-----PGCQPCQCSSPGVAD-DRCDPDTGQCRCRVGFEGAT 570
Query: 144 CERCLPGYYGDP 155
C+RC PGY+ P
Sbjct: 571 CDRCAPGYFHFP 582
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVH--GIGICDECHDWTTGDHCQYCRAGSYGNATTQEG 109
+C G+ G C C+ G G C TG CQ C G +G +
Sbjct: 618 RCRPGYHGFPNCQACTCDPRGALDQLCGAGGLCRCRPGYTGTACQECSPGFHGFPS---- 673
Query: 110 CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT-DGGTCYYQCMA 167
C C C++ G S+ CD +G+C C+ G C+ C+PG Y P + G+C+ +A
Sbjct: 674 CVPCHCSAEG-SLHAACDPRSGQCSCRPRVTGLRCDTCVPGAYNFPYCEAGSCHPAGLA 731
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C TG C C+ G +G GCR C C C +G+C C+ T G
Sbjct: 2042 CKAGVTGRRCDRCQEGHFGFDGCG-GCRPCACGPAAEG--SECHPQSGQCHCRPGTMGPQ 2098
Query: 144 CERCLPGYYGDPTDG 158
C C PGY+G P G
Sbjct: 2099 CRECAPGYWGLPEQG 2113
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 77 GIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVL--GVCDS 128
G +CDE C T C C+ ++G GC +C+C+ G L CD+
Sbjct: 1487 GARLCDELTGQCICPPRTIPPDCLLCQPQTFG-CHPLVGCEECNCSGPGIQELTDPTCDT 1545
Query: 129 ITGECICQDNTQGKNCERCLPGYYGDP 155
+G+C C+ N G+ C+ C PG++G P
Sbjct: 1546 DSGQCKCRPNVTGRRCDTCSPGFHGYP 1572
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 63/147 (42%), Gaps = 22/147 (14%)
Query: 41 GYCKGPPDY---SCQ-CELGWTGVDCSVNCLCNN----HSTCVHGIGICDECHDWTTGDH 92
G C+ P Y +CQ C G+ G V C C+ H+ C G C C TG
Sbjct: 648 GLCRCRPGYTGTACQECSPGFHGFPSCVPCHCSAEGSLHAACDPRSGQCS-CRPRVTGLR 706
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE----CICQDNTQGKNCERCL 148
C C G+Y + G C+ G L D E C+C+ + +G +C+RC
Sbjct: 707 CDTCVPGAYNFPYCEAG----SCHPAG---LAPVDPALPEAQVPCMCRAHVEGPSCDRCK 759
Query: 149 PGYYG-DPTDGGTCYY-QCMARGMLTG 173
PG++G P++ C C RG L G
Sbjct: 760 PGFWGLSPSNPEGCTRCSCDLRGTLGG 786
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 84 CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQG 141
C G C C+ G +G + + EGC +C C+ G + C TG+C C+ + G
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCG 805
Query: 142 KNCERCLPGYYG 153
+ C C G++G
Sbjct: 806 QACASCKDGFFG 817
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C T G C+ C G +G ++GCR+C C G CD TG C C G+
Sbjct: 2090 CRPGTMGPQCRECAPGYWG--LPEQGCRRCQCPG------GRCDPHTGRCNCPPGLSGER 2141
Query: 144 CERC 147
C+ C
Sbjct: 2142 CDTC 2145
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 110 CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C+ C C+ G G CD G C+CQ G +C+RC PGY+G P
Sbjct: 584 CQLCGCSPAGTLPEG-CDE-AGRCLCQPEFAGPHCDRCRPGYHGFP 627
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 113 CDCNSHGNSVLGVC--DSITGECICQDNTQGKNCERCLPGYYG 153
CDC++ G C D G C+C+ N QG +CE C PG+YG
Sbjct: 494 CDCSAAGTQG-NACRKDPRVGRCLCKPNFQGTHCELCAPGFYG 535
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCL 148
GD CQ C G Y + R C HG+S C +G C+ CQ NT+G +CERC
Sbjct: 1839 GDSCQECAPGFYRDVKGLFLGRCVPCQCHGHS--DRCLPGSGVCVDCQHNTEGAHCERCQ 1896
Query: 149 PGYYGDPTD 157
G+ D
Sbjct: 1897 AGFVSSRDD 1905
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 56 GWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCD 114
G T C + + C G G C C G C C+ G +G + GCR C
Sbjct: 772 GCTRCSCDLRGTLGGVAECQPGTGQCF-CKPHVCGQACASCKDGFFGLDQADYFGCRSCR 830
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ G ++ C+ TG C C+ NTQG C +Y
Sbjct: 831 CDI-GGALGQSCEPRTGVCRCRPNTQGPTCSEPARDHY 867
Score = 35.4 bits (80), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 95 YCR-AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+CR A + + G R C C+ G + C+ G+C C + G++C RC GY+G
Sbjct: 1419 FCRNAAASLSLFYNNGARPCGCHEVG-ATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWG 1477
Query: 154 DP 155
P
Sbjct: 1478 FP 1479
Score = 32.0 bits (71), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 112 KCDCNSHGNS--VLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGT 160
+C C+ H ++ D +C CQ NT G C+RC PG+ P T
Sbjct: 299 RCVCHGHADACDAKDPTDPFRLQCTCQHNTCGGTCDRCCPGFNQQPWKPAT 349
>sp|P11047|LAMC1_HUMAN Laminin subunit gamma-1 OS=Homo sapiens GN=LAMC1 PE=1 SV=3
Length = 1609
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C GD C C+ G + + T+ GCR C C+ G+ + C+ TG C+C+DN +G N
Sbjct: 418 CKPGVMGDKCDRCQPGFH--SLTEAGCRPCSCDPSGS--IDECNIETGRCVCKDNVEGFN 473
Query: 144 CERCLPGYY 152
CERC PG++
Sbjct: 474 CERCKPGFF 482
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGN 120
V C CN HS TC G+C+ C D T G HC+ C G YG++T T C+ C C G
Sbjct: 722 VLCACNGHSETCDPETGVCN-CRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPC--PGG 778
Query: 121 SVLGVCDSITGECICQD---NTQGKNCERCLPGYYGDP 155
S V T E +C + T GK CE C GY+GDP
Sbjct: 779 SSCAVVPK-TKEVVCTNCPTGTTGKRCELCDDGYFGDP 815
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 28 IFNASLCY-NKCIYGYCKGP--PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
I+N + Y ++C G+ P P+ + +C+ +C++ S+C G C EC
Sbjct: 853 IYNTAGFYCDRCKDGFFGNPLAPNPADKCK----ACNCNLYGTMKQQSSCNPVTGQC-EC 907
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
TG C C G Y N + +GC +CDC++ G S G CD TG+C CQ G++C
Sbjct: 908 LPHVTGQDCGACDPGFY-NLQSGQGCERCDCHALG-STNGQCDIRTGQCECQPGITGQHC 965
Query: 145 ERCLPGYYG 153
ERC ++G
Sbjct: 966 ERCEVNHFG 974
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI 134
+C C TTG C+ C G +G+ + G CR C C+ + + + +G C+ +TGEC+
Sbjct: 791 VCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDPNAVGNCNRLTGECL 850
Query: 135 -CQDNTQGKNCERCLPGYYGDP 155
C NT G C+RC G++G+P
Sbjct: 851 KCIYNTAGFYCDRCKDGFFGNP 872
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 90 GDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C+ C +G Y T G C C CN H + CD TG C C+DNT G +CE
Sbjct: 698 GQFCEMCLSG-YRRETPNLGPYSPCVLCACNGHSET----CDPETGVCNCRDNTAGPHCE 752
Query: 146 RCLPGYYGDPTDG 158
+C GYYGD T G
Sbjct: 753 KCSDGYYGDSTAG 765
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT---QEGCRKCDCNSH 118
CS N N C G C +C T G +C C+ G +GN + C+ C+CN +
Sbjct: 830 CSDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLY 889
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
G C+ +TG+C C + G++C C PG+Y + G C A G G
Sbjct: 890 GTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG 945
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
C + L + + C G C EC TG HC+ C +G EGC+ CDC+ G+
Sbjct: 935 CDCHALGSTNGQCDIRTGQC-ECQPGITGQHCERCEVNHFGFGP--EGCKPCDCHPEGSL 991
Query: 122 VLGVCDSITGECICQDNTQGKNCERCLPGYY 152
L D G C C++ G C++C Y+
Sbjct: 992 SLQCKDD--GRCECREGFVGNRCDQCEENYF 1020
>sp|P02468|LAMC1_MOUSE Laminin subunit gamma-1 OS=Mus musculus GN=Lamc1 PE=1 SV=2
Length = 1607
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C GD C C+ G + + T+ GCR C C+ G++ C+ TG C+C+DN +G N
Sbjct: 416 CKPGVMGDKCDRCQPGFH--SLTEAGCRPCSCDLRGST--DECNVETGRCVCKDNVEGFN 471
Query: 144 CERCLPGYY 152
CERC PG++
Sbjct: 472 CERCKPGFF 480
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGN 120
V C CN HS TC G+CD C D T G HC+ C G YG++T T C+ C C G+
Sbjct: 720 VLCTCNGHSETCDPETGVCD-CRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPC-PGGS 777
Query: 121 SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
S V + C C T GK CE C GY+GDP
Sbjct: 778 SCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDP 813
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI 134
+C C T G C+ C G +G+ G CR C CN + + + +G C+ +TGEC+
Sbjct: 789 VCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECL 848
Query: 135 -CQDNTQGKNCERCLPGYYGDP 155
C NT G C+RC G++G+P
Sbjct: 849 KCIYNTAGFYCDRCKEGFFGNP 870
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 18/133 (13%)
Query: 28 IFNASLCY-NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCN------NHSTCVHGIGI 80
I+N + Y ++C G+ P L D C CN S+C G
Sbjct: 851 IYNTAGFYCDRCKEGFFGNP--------LAPNPADKCKACACNPYGTVQQQSSCNPVTGQ 902
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C +C +G C C G Y N + +GC +CDC++ G S G CD TG+C CQ
Sbjct: 903 C-QCLPHVSGRDCGTCDPGYY-NLQSGQGCERCDCHALG-STNGQCDIRTGQCECQPGIT 959
Query: 141 GKNCERCLPGYYG 153
G++CERC ++G
Sbjct: 960 GQHCERCETNHFG 972
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT---QEGCRKCDCNSH 118
C+ N N C G C +C T G +C C+ G +GN + C+ C CN +
Sbjct: 828 CNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPY 887
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
G C+ +TG+C C + G++C C PGYY + G C A G G
Sbjct: 888 GTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNG 943
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 90 GDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C+ C G Y T G C C CN H + CD TG C C+DNT G +CE
Sbjct: 696 GQFCETCLPG-YRRETPSLGPYSPCVLCTCNGHSET----CDPETGVCDCRDNTAGPHCE 750
Query: 146 RCLPGYYGDPTDG 158
+C GYYGD T G
Sbjct: 751 KCSDGYYGDSTLG 763
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
C + L + + C G C EC TG HC+ C +G EGC+ CDC+ G+
Sbjct: 933 CDCHALGSTNGQCDIRTGQC-ECQPGITGQHCERCETNHFGFGP--EGCKPCDCHHEGSL 989
Query: 122 VLGVCDSITGECICQDNTQGKNCERCLPGYY 152
L D G C C++ G C++C Y+
Sbjct: 990 SLQCKDD--GRCECREGFVGNRCDQCEENYF 1018
>sp|Q9JI33|NET4_MOUSE Netrin-4 OS=Mus musculus GN=Ntn4 PE=2 SV=2
Length = 628
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNA----TTQEGCRKCDCNSHGNSVL-----GVCDSI 129
G+C+ C T G HCQ C+ G Y + + + C+ C C+ G+++L CD
Sbjct: 357 GVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDACKACSCHPVGSAILPFSSVTFCDPS 416
Query: 130 TGECICQDNTQGKNCERCLPGYYG 153
G+C C+ G +C+RC+ GY+G
Sbjct: 417 NGDCPCKPGVAGPHCDRCMVGYWG 440
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 31/102 (30%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRA--------GSYGNATTQEGCRKCDCNSH-------- 118
VHG +C H+ T G HCQ+C + G CR C CN H
Sbjct: 289 VHGRCMCK--HN-TAGSHCQHCAPLYNDRPWEAADGRTGAPNECRTCKCNGHADTCHFDV 345
Query: 119 ------GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
GN GVC++ CQ NT+G++C+RC PG+Y D
Sbjct: 346 NVWEASGNRSGGVCNN------CQHNTEGQHCQRCKPGFYRD 381
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
C G HC C G +G GCR CDC G CD +TG+CI
Sbjct: 422 CKPGVAGPHCDRCMVGYWGFGDY--GCRPCDC-------AGSCDPLTGDCI 463
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 11/58 (18%)
Query: 113 CDCNSHGNSVL-----------GVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
C CN H + L G + G C+C+ NT G +C+ C P Y P +
Sbjct: 262 CFCNGHADQCLPVEGFRPIKAPGAFHVVHGRCMCKHNTAGSHCQHCAPLYNDRPWEAA 319
>sp|Q8HZI9|LAMC2_HORSE Laminin subunit gamma-2 OS=Equus caballus GN=LAMC2 PE=2 SV=1
Length = 1190
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI 134
+C+ C TG C+ C G +G+ + G C+ C CN++ + S G CD +TG C+
Sbjct: 481 VCNNCPQGVTGARCELCADGYFGDPFGERGPVRPCQPCQCNNNVDPSASGNCDRLTGRCL 540
Query: 135 -CQDNTQGKNCERCLPGYYGDP 155
C NT G +C++C GYYGDP
Sbjct: 541 KCIHNTAGVHCDQCKAGYYGDP 562
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C C+D T G HC+ C+AG Y ++ C C+CNS G S+ CD+ +G C C+
Sbjct: 53 CLNCNDNTDGIHCERCKAGFY-RQRERDRCLPCNCNSKG-SLSARCDN-SGRCSCKPGVT 109
Query: 141 GKNCERCLPGYY 152
G C+RCLPG++
Sbjct: 110 GDRCDRCLPGFH 121
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 47/105 (44%), Gaps = 24/105 (22%)
Query: 63 SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGC--------RKCD 114
S++ C+N C C TGD C C G + T GC KCD
Sbjct: 91 SLSARCDNSGRC--------SCKPGVTGDRCDRCLPGFH--TLTDAGCAQDQRLLDSKCD 140
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
C+ G + G CDS G C+C+ G+ C+RC PGYY DGG
Sbjct: 141 CDPAG--ISGPCDS--GRCVCKPAVTGERCDRCRPGYYH--LDGG 179
Score = 38.9 bits (89), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 66 CLCNNH------STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT---QEGCRKCDCN 116
C CNN+ C G C +C T G HC C+AG YG+ + CR C+CN
Sbjct: 518 CQCNNNVDPSASGNCDRLTGRCLKCIHNTAGVHCDQCKAGYYGDPLAPNPADKCRACNCN 577
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCE 145
G+ + C S G C+C+ G +CE
Sbjct: 578 PVGSEPV-ECRS-DGSCVCKPGFGGLSCE 604
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 60/152 (39%), Gaps = 28/152 (18%)
Query: 27 YIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGV---DCSV-----NCLCNNHSTCV--- 75
YI N +L + + G P C C +G+ G DC+ + TC+
Sbjct: 359 YIDNVTLISARPVSG-APAPWVEQCVCPVGYKGQFCQDCASGYKRDSARLGPFGTCIPCN 417
Query: 76 -HGIGICD-ECHDWTTGDH------CQYCRAGSYGNATTQEGCRKCDC-NSHGNSVLGVC 126
G G CD + D +GD C C G Y + C+ C C N SV+
Sbjct: 418 CQGGGACDPDTGDCYSGDENPDIPECADCPIGFYNDPQDPRSCKPCPCRNGFSCSVM--- 474
Query: 127 DSITGECICQDNTQ---GKNCERCLPGYYGDP 155
T E +C + Q G CE C GY+GDP
Sbjct: 475 -PETEEVVCNNCPQGVTGARCELCADGYFGDP 505
>sp|Q24568|NETB_DROME Netrin-B OS=Drosophila melanogaster GN=NetB PE=1 SV=1
Length = 793
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATT----QEGCRKCDCNSHGNSVLGVCDSITGECI 134
G+C C TTG +C YCR G Y +AT ++ C++CDC+ G S C+ ++G+C
Sbjct: 523 GVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVG-STGKTCNHLSGQCP 581
Query: 135 CQDNTQGKNCERCLPGY 151
C++ G C RC GY
Sbjct: 582 CKEGVTGLTCNRCARGY 598
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 129 ITGECICQDNTQGKNCERCLPGYYGDP 155
+T C C+ NT G CERC P Y+ P
Sbjct: 457 LTMTCACKHNTAGPECERCKPFYFDRP 483
Score = 32.0 bits (71), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 14/87 (16%)
Query: 84 CHDWTTGDHCQYCRA----GSYGNATTQEG--CRKCDCNSHGN------SVLGVCDSITG 131
C T G C+ C+ +G AT + C+ C CN H + + ++G
Sbjct: 463 CKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGHARRCRFNLELYKLSGRVSG 522
Query: 132 EC--ICQDNTQGKNCERCLPGYYGDPT 156
CQ +T G+ C C GYY D T
Sbjct: 523 GVCYNCQHDTTGRYCHYCREGYYRDAT 549
>sp|Q8WTR8|NET5_HUMAN Netrin-5 OS=Homo sapiens GN=NTN5 PE=2 SV=2
Length = 489
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNAT----TQEGCRKCDCNSHGNSVLGVCDSITGECI 134
G+C+ C T G HC YC+ G + + + ++ CR C C+ G + G C+ +G+C
Sbjct: 237 GVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIG-ATGGTCNQTSGQCT 295
Query: 135 CQDNTQGKNCERCLPGY 151
C+ G C RC PGY
Sbjct: 296 CKLGVTGLTCNRCGPGY 312
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 26/95 (27%)
Query: 83 ECHDWTTGDHCQYCRAG----SYGNATTQEG--CRKCDCNSHG-----NSVL-------- 123
C TTG C+ CR + AT + C C CN H NS L
Sbjct: 176 HCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRS 235
Query: 124 -GVCDSITGECICQDNTQGKNCERCLPGYYGDPTD 157
GVC+ C+ +T G++C C PG++ DP+
Sbjct: 236 GGVCER------CRHHTAGRHCHYCQPGFWRDPSQ 264
>sp|Q24567|NETA_DROME Netrin-A OS=Drosophila melanogaster GN=NetA PE=2 SV=2
Length = 726
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATT----QEGCRKCDCNSHGNSVLGVCDSITGECI 134
G+C C TTG +C C+ G Y +AT ++ C+ CDC+ G+S +C+S +G+C
Sbjct: 394 GVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGSSG-KICNSTSGQCP 452
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYYQ 164
C+D G C RC GY + C Q
Sbjct: 453 CKDGVTGLTCNRCARGYQQSRSHIAPCIKQ 482
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 66 CLCNNH----STCVHGIGICDECHDWTTGDHCQYCRA----GSYGNATTQEG--CRKCDC 115
C CN H ST G C EC T G C+ C+ + AT +E C++C+C
Sbjct: 313 CKCNGHASKCSTDASGQLNC-ECSHNTAGRDCERCKPFHFDRPWARATAKEANECKECNC 371
Query: 116 NSHGN------SVLGVCDSITGECICQD---NTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
N H + + ++G +CQ+ +T G+NC +C G+Y D T T C
Sbjct: 372 NKHARQCRFNMEIFRLSQGVSGG-VCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCK 430
Query: 167 A 167
A
Sbjct: 431 A 431
Score = 31.6 bits (70), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 112 KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
+C CN H S S C C NT G++CERC P ++ P
Sbjct: 312 RCKCNGHA-SKCSTDASGQLNCECSHNTAGRDCERCKPFHFDRP 354
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.481
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161,481,421
Number of Sequences: 539616
Number of extensions: 7677771
Number of successful extensions: 20136
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 317
Number of HSP's that attempted gapping in prelim test: 14228
Number of HSP's gapped (non-prelim): 3953
length of query: 377
length of database: 191,569,459
effective HSP length: 119
effective length of query: 258
effective length of database: 127,355,155
effective search space: 32857629990
effective search space used: 32857629990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)