Query psy9819
Match_columns 377
No_of_seqs 260 out of 1572
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 20:31:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9819.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9819hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ygq_A WIF-1, WNT inhibitory f 99.7 7.3E-18 2.5E-22 158.5 10.5 91 32-145 149-243 (324)
2 4aqs_A Laminin subunit beta-1; 99.7 1.5E-16 5.1E-21 159.8 15.0 192 2-194 187-473 (525)
3 1klo_A Laminin; glycoprotein; 99.7 1.7E-17 5.7E-22 140.6 6.1 119 37-155 2-155 (162)
4 1klo_A Laminin; glycoprotein; 99.6 3.3E-16 1.1E-20 132.6 5.0 128 66-194 1-144 (162)
5 3fcs_B Integrin beta-3; beta p 99.6 2.7E-15 9.3E-20 153.2 10.0 90 36-145 440-559 (690)
6 2gy5_A Angiopoietin-1 receptor 99.6 2.8E-15 9.4E-20 145.8 7.1 130 49-194 185-318 (423)
7 2ygq_A WIF-1, WNT inhibitory f 99.5 4.8E-15 1.6E-19 139.3 7.3 159 102-356 143-308 (324)
8 4fbr_A Lectin, myxobacterial h 99.5 2E-17 6.7E-22 148.9 -13.6 80 298-377 167-264 (267)
9 2vj2_A Jagged-1; signalling, p 99.5 1.1E-14 3.7E-19 124.3 3.6 80 48-148 16-100 (169)
10 2gy5_A Angiopoietin-1 receptor 99.4 9.6E-14 3.3E-18 135.0 8.1 106 31-148 195-322 (423)
11 3k6s_B Integrin beta-2; cell r 99.3 5.9E-13 2E-17 135.6 3.4 68 67-145 436-513 (687)
12 4aqs_A Laminin subunit beta-1; 99.3 1.6E-12 5.6E-17 130.3 6.1 115 78-194 406-523 (525)
13 2vj3_A Neurogenic locus notch 99.3 5.6E-12 1.9E-16 103.3 6.6 99 31-145 5-118 (135)
14 3k6s_B Integrin beta-2; cell r 99.2 1.8E-11 6E-16 124.8 7.3 52 37-94 436-513 (687)
15 2vj2_A Jagged-1; signalling, p 99.2 4.7E-12 1.6E-16 107.9 2.5 97 40-145 43-168 (169)
16 4d90_A EGF-like repeat and dis 99.2 3.1E-11 1E-15 99.8 6.6 95 36-146 6-133 (143)
17 3fcs_B Integrin beta-3; beta p 99.1 7.8E-11 2.7E-15 120.4 8.2 114 38-194 495-626 (690)
18 1z1y_A Ookinete surface protei 99.1 2E-12 6.9E-17 111.9 -4.1 131 35-194 10-173 (186)
19 2vj3_A Neurogenic locus notch 99.1 1.3E-10 4.6E-15 95.0 6.7 80 298-377 5-114 (135)
20 4d90_A EGF-like repeat and dis 99.0 2.4E-10 8.1E-15 94.4 6.4 37 341-377 80-128 (143)
21 2y38_A Laminin subunit alpha-5 99.0 4.1E-10 1.4E-14 107.4 6.2 92 65-157 265-384 (403)
22 4fbr_A Lectin, myxobacterial h 98.9 6.7E-13 2.3E-17 119.4 -13.8 103 37-145 39-201 (267)
23 2bou_A EGF-like module contain 98.8 3.5E-09 1.2E-13 87.4 4.4 25 353-377 105-129 (143)
24 2p28_B Integrin beta-2; hybrid 98.8 3E-09 1E-13 93.7 3.9 89 37-146 97-214 (217)
25 4aqt_A Laminin subunit gamma-1 98.8 2.4E-09 8.1E-14 101.8 3.2 89 66-155 255-359 (375)
26 1szb_A Mannose binding lectin- 98.7 1.6E-08 5.5E-13 85.9 5.4 105 196-323 27-157 (170)
27 2bou_A EGF-like module contain 98.6 8.5E-09 2.9E-13 85.0 2.6 106 32-145 3-133 (143)
28 1tpg_A T-plasminogen activator 98.5 6.6E-08 2.3E-12 73.1 4.3 74 285-377 3-81 (91)
29 1nzi_A Complement C1S componen 98.5 5.9E-08 2E-12 81.3 4.3 105 196-323 20-148 (159)
30 1z1y_A Ookinete surface protei 98.5 4.1E-09 1.4E-13 91.0 -3.2 91 287-377 28-170 (186)
31 1tpg_A T-plasminogen activator 98.5 4.2E-08 1.4E-12 74.3 2.3 78 48-146 1-86 (91)
32 1dx5_I Thrombomodulin; serine 98.4 2.1E-08 7.1E-13 79.9 -0.2 37 341-377 61-110 (118)
33 4aqt_A Laminin subunit gamma-1 98.4 9.4E-08 3.2E-12 90.8 3.6 66 47-113 270-367 (375)
34 2p28_B Integrin beta-2; hybrid 98.4 1E-07 3.6E-12 83.8 3.3 24 305-328 98-121 (217)
35 2wg3_C Hedgehog-interacting pr 98.4 6.2E-08 2.1E-12 95.3 1.9 88 3-95 365-455 (463)
36 3zyj_B Netrin-G1; cell adhesio 98.3 1.7E-07 5.9E-12 89.7 2.8 83 65-156 296-396 (426)
37 1dx5_I Thrombomodulin; serine 98.3 1.3E-07 4.6E-12 75.1 1.6 94 31-142 4-111 (118)
38 2y38_A Laminin subunit alpha-5 98.3 5.3E-07 1.8E-11 86.0 5.9 58 49-106 286-384 (403)
39 1aut_L Activated protein C; se 98.3 3.1E-07 1.1E-11 72.5 3.6 64 300-376 17-84 (114)
40 1emn_A Fibrillin; extracellula 98.3 6.3E-07 2.2E-11 66.3 3.9 64 297-377 4-75 (82)
41 1uzk_A Fibrillin-1; glycoprote 98.2 9.9E-08 3.4E-12 80.3 -1.0 105 31-142 3-155 (162)
42 1yo8_A Thrombospondin-2; EGF, 98.2 7.5E-07 2.6E-11 89.9 4.1 108 32-145 4-145 (634)
43 2wg3_C Hedgehog-interacting pr 98.2 1.5E-07 5E-12 92.6 -1.0 70 286-356 379-455 (463)
44 1x7a_L Coagulation factor IX, 98.2 6.9E-07 2.4E-11 73.7 2.8 64 297-376 47-116 (146)
45 1sfp_A ASFP; spermadhesin, bov 98.1 8.7E-07 3E-11 69.9 2.9 82 196-299 28-111 (114)
46 1spp_A Major seminal plasma gl 98.1 7.5E-07 2.6E-11 69.7 2.4 80 196-298 24-105 (109)
47 2w86_A Fibrillin-1, fibrillin1 98.1 2.6E-07 9E-12 76.4 -0.5 79 297-377 3-139 (147)
48 2wno_A Tumor necrosis factor-i 98.1 3.2E-06 1.1E-10 69.9 5.9 85 196-300 30-120 (149)
49 1yo8_A Thrombospondin-2; EGF, 98.1 1.6E-06 5.5E-11 87.5 4.1 87 285-376 26-138 (634)
50 1spp_B Major seminal plasma gl 98.1 1.3E-06 4.6E-11 69.0 2.6 81 196-298 27-109 (116)
51 2w86_A Fibrillin-1, fibrillin1 98.1 1.6E-07 5.6E-12 77.6 -3.0 34 31-64 4-39 (147)
52 1nfu_B Coagulation factor XA, 98.0 1.1E-06 3.9E-11 75.7 1.7 73 290-376 33-111 (195)
53 3h5c_B Vitamin K-dependent pro 98.0 9.5E-06 3.2E-10 75.6 7.1 66 297-376 4-74 (317)
54 2vh0_B Activated factor XA lig 98.0 1.8E-06 6.2E-11 70.1 1.8 73 290-376 33-111 (134)
55 2c4f_L Coagulation factor VII 98.0 2.1E-06 7.2E-11 70.5 2.1 68 297-376 46-119 (142)
56 2c4f_L Coagulation factor VII 98.0 2.1E-06 7.1E-11 70.5 1.8 64 30-94 46-128 (142)
57 3zyj_B Netrin-G1; cell adhesio 98.0 2.4E-06 8.1E-11 81.8 2.5 87 40-148 302-400 (426)
58 3u7u_G Neuregulin 1; signaling 97.9 6.5E-06 2.2E-10 55.5 3.8 36 29-64 6-49 (55)
59 1k36_A Epiregulin; EGF-like fo 97.9 4.4E-06 1.5E-10 54.3 2.3 29 36-64 12-43 (46)
60 3poj_A Mannan-binding lectin s 97.9 1.9E-05 6.6E-10 62.0 6.4 79 196-297 28-114 (115)
61 1emn_A Fibrillin; extracellula 97.9 8E-06 2.7E-10 60.2 3.3 59 31-91 5-76 (82)
62 1uzk_A Fibrillin-1; glycoprote 97.9 1.2E-06 4.1E-11 73.6 -1.5 90 284-377 24-154 (162)
63 3u7u_G Neuregulin 1; signaling 97.8 5.4E-06 1.8E-10 55.9 1.6 37 295-331 5-51 (55)
64 1x7a_L Coagulation factor IX, 97.8 1.1E-05 3.9E-10 66.3 3.7 58 29-89 46-116 (146)
65 3dem_A Complement factor MAsp- 97.8 2.1E-05 7.1E-10 71.9 5.8 119 196-338 24-168 (278)
66 3dem_A Complement factor MAsp- 97.8 3.3E-05 1.1E-09 70.6 6.7 80 196-298 190-277 (278)
67 1lmj_A Fibrillin 1; EGF, calci 97.8 6E-06 2E-10 61.5 1.3 65 297-377 2-78 (86)
68 1nt0_A MAsp2, mannose-binding 97.8 3.7E-05 1.3E-09 70.6 6.7 82 196-298 23-117 (286)
69 1aut_L Activated protein C; se 97.7 1.3E-05 4.3E-10 63.1 2.4 56 34-90 18-85 (114)
70 4aqb_A Mannan-binding lectin s 97.7 4.9E-05 1.7E-09 72.1 6.6 106 196-324 190-316 (361)
71 1edm_B Factor IX; epidermal gr 97.6 2.7E-05 9.4E-10 48.5 2.5 32 298-329 3-39 (39)
72 1edm_B Factor IX; epidermal gr 97.6 3.1E-05 1.1E-09 48.3 2.8 34 31-64 3-39 (39)
73 3ca7_A Protein spitz; argos, E 97.5 7.1E-06 2.4E-10 54.9 -1.1 36 342-377 4-43 (52)
74 1egf_A Epidermal growth factor 97.5 6.3E-05 2.2E-09 50.3 3.6 28 37-64 13-44 (53)
75 1nfu_B Coagulation factor XA, 97.5 1.1E-05 3.9E-10 69.4 -0.3 63 29-94 40-120 (195)
76 1a3p_A Epidermal growth factor 97.5 6.6E-05 2.2E-09 48.4 3.2 28 37-64 10-41 (45)
77 2w2n_E LDL receptor, low-densi 97.5 2E-05 6.7E-10 61.3 0.7 69 290-377 20-99 (107)
78 1lmj_A Fibrillin 1; EGF, calci 97.5 3.3E-05 1.1E-09 57.4 1.7 59 31-91 3-79 (86)
79 1egf_A Epidermal growth factor 97.5 9E-05 3.1E-09 49.6 3.5 34 298-331 3-46 (53)
80 1nt0_A MAsp2, mannose-binding 97.4 0.00022 7.6E-09 65.3 7.0 81 196-299 189-277 (286)
81 4gz9_A Neuropilin-1, A5 protei 97.4 0.00011 3.9E-09 74.0 5.1 84 196-299 152-247 (577)
82 2ygo_A WIF-1, WNT inhibitory f 97.4 0.0002 6.7E-09 60.4 5.5 38 25-64 142-180 (188)
83 2qqm_A Neuropilin-1; VEGF rece 97.4 0.00012 3.9E-09 71.7 4.8 84 196-299 34-129 (450)
84 1z6c_A Vitamin K-dependent pro 97.4 5.9E-05 2E-09 56.1 2.0 60 298-376 3-75 (87)
85 2qqo_A Neuropilin-2; VEGF rece 97.3 0.00018 6.2E-09 70.6 5.7 84 196-299 31-126 (460)
86 2vh0_B Activated factor XA lig 97.3 2.6E-05 8.9E-10 63.2 -0.3 63 29-94 40-120 (134)
87 3kq4_B Cubilin; protein-protei 97.3 0.00037 1.3E-08 68.2 7.4 82 196-299 24-111 (457)
88 1nql_B Epidermal growth factor 97.2 9.5E-05 3.3E-09 49.4 1.7 30 35-64 11-44 (53)
89 1a3p_A Epidermal growth factor 97.2 0.00012 4.3E-09 47.1 2.0 28 304-331 10-43 (45)
90 1hae_A Heregulin-alpha; growth 97.2 0.0002 6.7E-09 49.8 3.0 29 36-64 12-47 (63)
91 4gz9_A Neuropilin-1, A5 protei 97.1 0.00046 1.6E-08 69.6 6.3 86 196-299 33-123 (577)
92 2ygo_A WIF-1, WNT inhibitory f 97.1 0.00026 9E-09 59.6 3.7 36 295-330 145-181 (188)
93 4aqb_A Mannan-binding lectin s 97.1 0.00032 1.1E-08 66.5 4.7 116 196-328 24-159 (361)
94 1k36_A Epiregulin; EGF-like fo 97.1 0.00015 5.3E-09 46.8 1.5 32 298-330 3-44 (46)
95 3ca7_A Protein spitz; argos, E 97.1 0.00013 4.3E-09 48.6 1.0 29 36-64 14-48 (52)
96 2fd6_A Urokinase-type plasmino 97.1 0.0002 6.8E-09 56.9 2.0 51 304-355 2-62 (122)
97 3kq4_B Cubilin; protein-protei 97.0 0.00077 2.6E-08 66.0 6.4 83 196-298 257-345 (457)
98 1z6c_A Vitamin K-dependent pro 97.0 0.00024 8.2E-09 52.8 1.9 53 38-94 13-77 (87)
99 3h5c_B Vitamin K-dependent pro 97.0 0.0005 1.7E-08 63.8 4.5 58 30-90 4-75 (317)
100 2e26_A Reelin, reeler protein; 97.0 0.00018 6.3E-09 72.7 1.3 53 286-338 520-576 (725)
101 1n7d_A LDL receptor, low-densi 97.0 0.038 1.3E-06 56.9 18.7 51 309-376 306-363 (699)
102 3ltf_D Protein spitz; receptor 96.9 0.00027 9.3E-09 48.1 1.3 28 37-64 15-48 (58)
103 2k2s_B Micronemal protein 6; m 96.8 0.00044 1.5E-08 47.5 1.7 34 31-64 11-50 (61)
104 1n7d_A LDL receptor, low-densi 96.8 0.012 4E-07 60.8 13.1 148 37-192 182-365 (699)
105 2qqk_A Neuropilin-2; VEGF rece 96.7 0.0012 4.1E-08 66.7 5.3 83 196-298 150-244 (579)
106 2qqk_A Neuropilin-2; VEGF rece 96.7 0.0018 6.3E-08 65.3 6.6 85 196-298 30-119 (579)
107 1nql_B Epidermal growth factor 96.5 0.0013 4.6E-08 43.7 2.6 32 345-377 6-39 (53)
108 3e50_C Protransforming growth 96.4 0.0019 6.6E-08 42.2 2.9 29 36-64 14-45 (50)
109 3p5b_L Low density lipoprotein 96.3 0.0013 4.4E-08 63.1 2.3 56 304-376 7-69 (400)
110 2fd6_A Urokinase-type plasmino 96.3 0.0026 9E-08 50.3 3.4 54 37-94 2-62 (122)
111 3ltf_D Protein spitz; receptor 96.3 0.0004 1.4E-08 47.3 -1.2 33 345-377 7-43 (58)
112 2rnl_A Amphiregulin; AR, color 96.1 0.004 1.4E-07 40.8 3.2 29 36-64 18-49 (50)
113 2p26_A Integrin beta-2; hybrid 96.1 0.0012 4.1E-08 59.9 0.9 52 305-356 198-275 (280)
114 1iox_A Betacellulin; EGF-like 96.1 0.0026 9E-08 41.7 2.2 29 36-64 14-45 (50)
115 2w2n_E LDL receptor, low-densi 96.1 0.0019 6.4E-08 49.9 1.6 76 96-193 18-101 (107)
116 3v65_B Low-density lipoprotein 96.0 0.0018 6.1E-08 61.8 1.3 62 298-376 3-73 (386)
117 2k2s_B Micronemal protein 6; m 96.0 0.0035 1.2E-07 42.9 2.4 24 353-376 18-43 (61)
118 2i9a_A Urokinase-type plasmino 96.0 0.0026 8.8E-08 51.9 2.0 51 304-355 14-74 (145)
119 1hae_A Heregulin-alpha; growth 95.8 0.0053 1.8E-07 42.3 2.9 26 352-377 12-42 (63)
120 1xdt_R Hbegf, heparin-binding 95.8 0.003 1E-07 45.4 1.4 34 31-64 37-77 (79)
121 3m0c_C LDL receptor, low-densi 94.5 0.027 9.3E-07 58.8 4.7 38 340-377 332-382 (791)
122 2e26_A Reelin, reeler protein; 94.4 0.0067 2.3E-07 61.4 -0.2 41 316-356 520-565 (725)
123 1g1s_A P-selectin; selectin, l 94.3 0.014 4.9E-07 48.1 1.8 34 31-64 119-155 (162)
124 1g1s_A P-selectin; selectin, l 93.7 0.0099 3.4E-07 49.1 -0.4 36 295-330 116-156 (162)
125 3m0c_C LDL receptor, low-densi 93.6 0.18 6.2E-06 52.6 8.7 29 164-192 354-383 (791)
126 2rnl_A Amphiregulin; AR, color 93.2 0.068 2.3E-06 34.8 3.0 26 303-329 18-49 (50)
127 3nt1_A Prostaglandin-endoperox 93.1 0.038 1.3E-06 55.3 2.6 32 33-64 3-39 (587)
128 3cfw_A L-selectin; EGF, cell a 93.1 0.028 9.5E-07 46.4 1.4 39 296-334 117-161 (164)
129 1q4g_A Prostaglandin G/H synth 93.0 0.037 1.3E-06 55.2 2.3 32 33-64 4-40 (553)
130 1q4g_A Prostaglandin G/H synth 92.4 0.031 1.1E-06 55.7 0.9 32 299-330 3-41 (553)
131 1apq_A Complement protease C1R 91.9 0.061 2.1E-06 35.2 1.6 23 352-376 20-42 (53)
132 2i9a_A Urokinase-type plasmino 91.8 0.071 2.4E-06 43.3 2.2 28 37-64 14-46 (145)
133 3p5b_L Low density lipoprotein 91.6 0.1 3.5E-06 49.8 3.4 48 41-91 12-71 (400)
134 1g1t_A E-selectin; EGF, adhesi 91.3 0.032 1.1E-06 45.7 -0.4 36 295-330 116-156 (157)
135 2ddu_A Reelin; beta-jelly-roll 91.2 0.022 7.5E-07 53.5 -1.6 35 295-329 188-224 (387)
136 3e50_C Protransforming growth 91.2 0.1 3.5E-06 34.0 2.0 15 342-356 31-45 (50)
137 3nt1_A Prostaglandin-endoperox 91.1 0.054 1.9E-06 54.2 1.0 32 299-330 2-40 (587)
138 3v65_B Low-density lipoprotein 90.9 0.037 1.3E-06 52.5 -0.5 53 38-94 13-82 (386)
139 3tbd_A Netrin-G2, laminet-2; l 90.3 0.089 3E-06 48.7 1.6 42 65-107 269-313 (338)
140 1xdt_R Hbegf, heparin-binding 90.0 0.17 5.9E-06 36.2 2.5 24 352-376 46-71 (79)
141 2jkh_L Factor X light chain; p 89.9 0.13 4.4E-06 34.1 1.7 21 354-376 11-31 (55)
142 1iox_A Betacellulin; EGF-like 89.8 0.19 6.5E-06 32.6 2.4 31 345-377 8-40 (50)
143 3cfw_A L-selectin; EGF, cell a 89.3 0.18 6E-06 41.5 2.5 28 37-64 126-155 (164)
144 1apq_A Complement protease C1R 89.2 0.17 5.9E-06 33.0 1.9 24 36-60 20-44 (53)
145 1kig_L Factor XA; glycoprotein 87.9 0.14 4.9E-06 33.4 0.8 22 353-376 7-28 (51)
146 2p26_A Integrin beta-2; hybrid 86.9 0.2 7E-06 45.2 1.4 67 68-145 198-274 (280)
147 3fl7_A Ephrin receptor; ATP-bi 86.4 0.21 7.3E-06 49.5 1.4 67 68-141 252-320 (536)
148 1g1t_A E-selectin; EGF, adhesi 85.8 0.19 6.5E-06 40.8 0.6 27 37-63 126-154 (157)
149 2kl7_A Fibulin-4; secreted, ca 85.4 0.33 1.1E-05 34.0 1.7 18 353-370 12-29 (71)
150 2bz6_L Blood coagulation facto 85.3 0.37 1.3E-05 31.6 1.7 21 354-376 9-30 (53)
151 2wph_E Coagulation factor IXA 82.6 0.65 2.2E-05 31.2 2.1 21 354-376 9-30 (59)
152 2ddu_A Reelin; beta-jelly-roll 81.8 0.56 1.9E-05 44.0 2.0 29 32-63 192-223 (387)
153 1kli_L Factor VIIA; extrinsic 81.3 0.64 2.2E-05 32.3 1.7 21 354-376 15-36 (69)
154 2uwi_A CRME protein; receptor, 77.2 0.85 2.9E-05 36.7 1.5 49 92-140 37-88 (142)
155 3asi_A Neurexin-1-alpha; beta- 76.6 1.2 3.9E-05 42.5 2.5 29 36-64 191-222 (410)
156 2hey_R Tumor necrosis factor r 74.5 1.4 4.6E-05 35.6 2.0 63 92-154 39-111 (146)
157 3asi_A Neurexin-1-alpha; beta- 72.6 1.4 4.7E-05 41.9 1.9 32 299-330 186-223 (410)
158 3tbd_A Netrin-G2, laminet-2; l 72.4 1.2 4E-05 41.2 1.3 39 113-155 270-310 (338)
159 3t3p_B Integrin beta-3; integr 66.8 1.8 6.2E-05 41.8 1.3 25 304-328 447-472 (472)
160 3qcw_A Neurexin-1-alpha; synap 63.2 3 0.0001 45.7 2.4 31 300-330 1019-1055(1245)
161 1szb_A Mannose binding lectin- 62.0 4.8 0.00017 32.9 3.0 22 353-376 136-157 (170)
162 3qcw_A Neurexin-1-alpha; synap 61.2 3.8 0.00013 44.9 2.7 32 33-64 621-656 (1245)
163 1gl4_A Nidogen-1, entactin; im 57.3 1.6 5.4E-05 39.3 -1.0 33 297-329 4-45 (285)
164 3v4v_B Integrin beta-7; cell a 56.8 2.3 7.8E-05 41.4 0.0 26 305-330 469-495 (503)
165 1cmr_A Charybdotoxin, alpha ch 54.4 7.7 0.00026 22.2 2.0 21 300-320 6-31 (31)
166 1gl4_A Nidogen-1, entactin; im 53.3 4.2 0.00014 36.5 1.1 33 31-63 5-44 (285)
167 4fhq_A Tumor necrosis factor r 51.2 4 0.00014 32.3 0.6 49 92-140 38-90 (134)
168 3fl7_A Ephrin receptor; ATP-bi 50.0 6.9 0.00024 38.6 2.2 37 125-161 257-295 (536)
169 1jlz_A Tityustoxin alpha-KTX; 45.7 2 6.8E-05 23.5 -1.3 20 301-320 5-24 (26)
170 1n1i_A Merozoite surface prote 41.4 19 0.00066 26.9 2.9 22 304-325 17-43 (105)
171 3tje_F Tumor necrosis factor r 40.7 9.4 0.00032 31.0 1.3 9 131-139 109-117 (156)
172 1nzi_A Complement C1S componen 39.6 12 0.00041 29.9 1.8 18 359-376 131-148 (159)
173 1bah_A Charybdotoxin, chabii; 37.9 12 0.0004 22.4 1.0 21 300-320 12-37 (37)
174 3g5c_A ADAM 22; alpha/beta fol 35.5 8.6 0.0003 37.6 0.3 27 304-330 455-482 (510)
175 1jma_B Herpesvirus entry media 35.3 15 0.00052 30.0 1.8 50 91-140 35-88 (167)
176 1pvz_A K+ toxin-like peptide; 34.7 3.8 0.00013 23.5 -1.4 19 300-318 12-30 (31)
177 3urf_Z Tumor necrosis factor r 31.1 16 0.00055 30.0 1.2 48 92-140 40-91 (171)
178 3t5o_A Complement component C6 30.9 11 0.00036 39.9 0.1 62 3-64 461-533 (913)
179 3u3p_A Tumor necrosis factor r 30.7 17 0.00058 33.0 1.4 10 131-140 88-97 (313)
180 1sg1_X Tumor necrosis factor r 29.0 27 0.00091 28.2 2.2 10 131-140 77-86 (161)
181 3me4_A Tumor necrosis factor r 28.7 16 0.00053 31.4 0.7 9 131-139 109-117 (216)
182 1ob1_C Major merozoite surface 28.4 23 0.0008 26.2 1.5 50 39-89 14-83 (99)
183 1ext_A Tumor necrosis factor r 27.3 18 0.0006 29.4 0.8 48 93-140 42-93 (162)
184 3k51_B Decoy receptor 3; DCR3, 27.2 20 0.00068 29.6 1.1 47 93-140 43-93 (176)
185 2lix_A IMKTX104, potassium cha 32.7 14 0.00046 19.5 0.0 11 308-318 16-26 (27)
186 1du3_A Death receptor 5; trail 26.2 34 0.0011 26.6 2.2 8 132-139 83-90 (130)
187 2ahx_A P180ERBB4, receptor tyr 25.5 34 0.0012 34.3 2.7 31 73-103 544-576 (617)
188 3qd6_R CD40L receptor, tumor n 25.3 43 0.0015 27.4 2.9 16 43-58 75-90 (177)
189 3t5o_A Complement component C6 24.7 24 0.00082 37.2 1.5 32 300-332 501-536 (913)
190 3t3p_B Integrin beta-3; integr 24.1 27 0.00092 33.7 1.5 15 131-145 458-472 (472)
191 1wz5_A Potassium channel block 23.7 34 0.0012 20.1 1.3 15 306-320 20-34 (35)
192 3g5c_A ADAM 22; alpha/beta fol 22.0 36 0.0012 33.2 2.0 27 67-95 455-481 (510)
193 3fby_A COMP, cartilage oligome 21.0 44 0.0015 32.7 2.3 30 30-59 17-53 (551)
194 1yy9_A Epidermal growth factor 20.0 29 0.00099 34.8 0.9 19 33-51 481-499 (624)
No 1
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.73 E-value=7.3e-18 Score=158.54 Aligned_cols=91 Identities=33% Similarity=0.841 Sum_probs=63.4
Q ss_pred CCcCCCCCC-CeecCCCCeeeecCCCCccCCCCC-CC--CCCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCC
Q psy9819 32 SLCYNKCIY-GYCKGPPDYSCQCELGWTGVDCSV-NC--LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107 (377)
Q Consensus 32 ~~C~~~C~~-G~C~~~~~~~C~C~~G~~G~~C~~-~C--~C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~ 107 (377)
+.|+++|++ |+|+. .++|+|++||+|.+|+. .| +|.++|+|+. ++.| .|++||+|.+|+.
T Consensus 149 ~~C~~~C~~~G~C~~--~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~-~~~C-~C~~G~~G~~C~~------------ 212 (324)
T 2ygq_A 149 AECPGGCRNGGFCNE--RRICECPDGFHGPHCEKALCTPRCMNGGLCVT-PGFC-ICPPGFYGVNCDK------------ 212 (324)
T ss_dssp CCCSSCCCSSCEECT--TSCEECCTTEESSSSCEESSSSCCCTTCEECS-SCCE-ECCTTCBTTTTCB------------
T ss_pred CCCCCCCCCCCEECC--CCeEECCCCCcCCCCCCCCCCCCCCCCCEEcC-CCEE-eCCCCccCCCccc------------
Confidence 567778875 88875 46888888888888885 34 5778888865 5677 5777777766652
Q ss_pred CCccCCCCCCCCCcCcccccCCCcceecCCCCccCCCc
Q psy9819 108 EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145 (377)
Q Consensus 108 ~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~ 145 (377)
..|. .+|.++| +|.. ++.|.|.+||+|..|+
T Consensus 213 ~~C~-~~C~~~G-----~C~~-~~~C~C~~G~~G~~C~ 243 (324)
T 2ygq_A 213 ANCS-TTCFNGG-----TCFY-PGKCICPPGLEGEQCE 243 (324)
T ss_dssp CCCS-SCCCSSC-----CBSC-SSCBCCCTTCCTTTTC
T ss_pred CcCC-CCCCCCC-----eeCC-CCeeeCCCCccCCCCC
Confidence 2333 2566665 6754 5678888888777776
No 2
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.69 E-value=1.5e-16 Score=159.76 Aligned_cols=192 Identities=26% Similarity=0.588 Sum_probs=122.4
Q ss_pred eeEEEecCCCCCcccccc-------cceeeeEeeecCCCcCC--------------------------CC-CC-CeecC-
Q psy9819 2 SIIFRISGLTTAKDDALS-------RCTVLLLYIFNASLCYN--------------------------KC-IY-GYCKG- 45 (377)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~C~~--------------------------~C-~~-G~C~~- 45 (377)
.||+++|.+...+.|+|+ +.|.||++++....-.. .| .| ..|..
T Consensus 187 ~v~~~~~~~~~~~~~~~s~~l~~~~~~t~iri~~~~~~~~~~~~~~~~~~~~~~~~Yai~di~v~grC~CnGHa~~C~p~ 266 (525)
T 4aqs_A 187 EVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPV 266 (525)
T ss_dssp EEEEESSCSSSCCSCTTSHHHHHHHEEEEEEEEEEECCCTTCCCTTCCHHHHTTCCCEEEEEEEEEECCCTTBCSCEECC
T ss_pred eEEEEecCCCcccCCCCChhhhhhhhhhhhhhheecccccccccccccccccccccEEEEeeEECeEeccCCccccCCCc
Confidence 489999976655677766 67777776654322110 13 23 23431
Q ss_pred ---------CCCeeeecCCCCccCCCCC----------------------CCCCCCCc-eee-----------cCCCccc
Q psy9819 46 ---------PPDYSCQCELGWTGVDCSV----------------------NCLCNNHS-TCV-----------HGIGICD 82 (377)
Q Consensus 46 ---------~~~~~C~C~~G~~G~~C~~----------------------~C~C~~~g-~C~-----------~~~~~C~ 82 (377)
...++|.|++||+|.+|++ .|.|++++ .|. ...++|.
T Consensus 267 ~g~~~~~~g~~~g~C~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~~C~C~~~~~~C~~d~~~c~~~~~~~gg~C~ 346 (525)
T 4aqs_A 267 DGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCD 346 (525)
T ss_dssp ------CCSCCCCEECCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCCCCCCTTSCSEEEECHHHHHHTTSSCCEEEE
T ss_pred CCcccCCCCCcCccccCcCCCcCCCCcCCCCccCCCccCCCcccCCCcccccccCCCCCCCCCCcccccccCccCCCccc
Confidence 2256899999999999984 12455554 454 1245676
Q ss_pred CCCCCCCCCCCCCCCCCcccCCCCC----CCccCCCCCCCCCcCcccccC--------CCcceecCCCCccCCCccCCCC
Q psy9819 83 ECHDWTTGDHCQYCRAGSYGNATTQ----EGCRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPG 150 (377)
Q Consensus 83 ~C~~g~~G~~C~~C~~g~~g~~c~~----~~C~~~~C~~~g~~~~g~C~~--------~~g~C~C~~g~~G~~C~~C~~G 150 (377)
.|.++|.|.+|+.|.++|++..... ..+.++.|...+......|.. ..+.|.|.++|.|.+|++|.+|
T Consensus 347 ~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~~~~~~~~~~~~C~C~~g~~G~~C~~C~~G 426 (525)
T 4aqs_A 347 NCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEG 426 (525)
T ss_dssp SCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCSCBGGGTBCSSCCCBCTTEETTTTCEECTT
T ss_pred CCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCCCCCCcCCCCCccCCCCCCCCCcccCCCCC
Confidence 8999999999999999999876543 334455555444332223332 2468999999999999999999
Q ss_pred ccCCCCC-CCCCCC-CCCCCCCCC--CCCCCCCCCcccCCCCCccCCC
Q psy9819 151 YYGDPTD-GGTCYY-QCMARGMLT--GPGPQGLGSGLAERNAWEGKDT 194 (377)
Q Consensus 151 ~~g~~~~-~~~C~~-~C~~~g~~~--~~~~~~~g~~~~c~~G~~G~~C 194 (377)
|+|..+. ...|.. .|...+++. ..|....|.+ .|++||+|..|
T Consensus 427 y~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C-~C~~g~~G~~C 473 (525)
T 4aqs_A 427 FYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYC-YCKRLVTGQRC 473 (525)
T ss_dssp EECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCB-CBCTTCCSTTT
T ss_pred CcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEE-ECCCCCcCCCc
Confidence 9998653 233443 565555443 2333333333 46667777765
No 3
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.69 E-value=1.7e-17 Score=140.60 Aligned_cols=119 Identities=32% Similarity=0.822 Sum_probs=100.3
Q ss_pred CCCC-CeecCC---CCeee-ecCCCCccCCCCC--------------------CCCCCCC------ceeecCCCcccCCC
Q psy9819 37 KCIY-GYCKGP---PDYSC-QCELGWTGVDCSV--------------------NCLCNNH------STCVHGIGICDECH 85 (377)
Q Consensus 37 ~C~~-G~C~~~---~~~~C-~C~~G~~G~~C~~--------------------~C~C~~~------g~C~~~~~~C~~C~ 85 (377)
||+| |+|+.. +.++| .|+++|+|..|++ +|.|+++ ++|+..+++|+.|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~ 81 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCI 81 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCC
Confidence 4766 789743 35799 7999999999984 2567776 57988899995599
Q ss_pred CCCCCCCCCCCCCCcccCCCCC---CCccCCCCCCCCCcCc-ccccCCCcceecCCCCccCCCccCCCCccCCC
Q psy9819 86 DWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNSHGNSVL-GVCDSITGECICQDNTQGKNCERCLPGYYGDP 155 (377)
Q Consensus 86 ~g~~G~~C~~C~~g~~g~~c~~---~~C~~~~C~~~g~~~~-g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~ 155 (377)
++|+|.+||+|++||||..+.. ..|+++.|++.|+... ++|+..+|+|.|+++|+|.+|++|.+||++..
T Consensus 82 ~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~C~~g~~g~~ 155 (162)
T 1klo_A 82 YNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQ 155 (162)
T ss_dssp TTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCEECTTCBCGG
T ss_pred CCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCCCCCCCcccCC
Confidence 9999999999999999998762 5799999998875432 48998899999999999999999999999873
No 4
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.61 E-value=3.3e-16 Score=132.62 Aligned_cols=128 Identities=30% Similarity=0.729 Sum_probs=100.9
Q ss_pred CCCCCCceeecC----CCcccCCCCCCCCCCCCCCCCCcccCCCCC----CCccCCCCCCCCCcC-cccccCCCccee-c
Q psy9819 66 CLCNNHSTCVHG----IGICDECHDWTTGDHCQYCRAGSYGNATTQ----EGCRKCDCNSHGNSV-LGVCDSITGECI-C 135 (377)
Q Consensus 66 C~C~~~g~C~~~----~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~----~~C~~~~C~~~g~~~-~g~C~~~~g~C~-C 135 (377)
|+|+++++|+.. .++|+.|+++|+|.+||+|++||+|..... ..|+++.|++++... .++|+..+++|. |
T Consensus 1 C~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C 80 (162)
T 1klo_A 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKC 80 (162)
T ss_dssp CCSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCB
T ss_pred CcCcCcCcccccCCCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCC
Confidence 578999999854 468966999999999999999999987653 468889998875321 247888899995 9
Q ss_pred CCCCccCCCccCCCCccCCCCC---CCCCCC-CCCCCCCCCC--CCCCCCCCcccCCCCCccCCC
Q psy9819 136 QDNTQGKNCERCLPGYYGDPTD---GGTCYY-QCMARGMLTG--PGPQGLGSGLAERNAWEGKDT 194 (377)
Q Consensus 136 ~~g~~G~~C~~C~~G~~g~~~~---~~~C~~-~C~~~g~~~~--~~~~~~g~~~~c~~G~~G~~C 194 (377)
+++|+|.+|++|++||+|++.. ...|.. .|+..++.+. .|....|.+ .|++||+|+.|
T Consensus 81 ~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C-~C~~g~~G~~C 144 (162)
T 1klo_A 81 IYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQC-QCLPHVSGRDC 144 (162)
T ss_dssp CTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCC-CBCTTEESTTC
T ss_pred CCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEe-ECCCCCcCCCC
Confidence 9999999999999999998754 234554 7777775543 565555555 68899999998
No 5
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.58 E-value=2.7e-15 Score=153.15 Aligned_cols=90 Identities=31% Similarity=0.909 Sum_probs=66.6
Q ss_pred CCCCC-Ceec-CCCCee---eecCCCCccCCCCCC-----------CC-------CCCCceeecCCCcccCCC----CCC
Q psy9819 36 NKCIY-GYCK-GPPDYS---CQCELGWTGVDCSVN-----------CL-------CNNHSTCVHGIGICDECH----DWT 88 (377)
Q Consensus 36 ~~C~~-G~C~-~~~~~~---C~C~~G~~G~~C~~~-----------C~-------C~~~g~C~~~~~~C~~C~----~g~ 88 (377)
+||.| ++|. ..+++. |.|++||+|..|+.+ |. |+++|+|. .+.| .|. +||
T Consensus 440 ~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~g~C-~C~~~~~~Gy 516 (690)
T 3fcs_B 440 QAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL--CGQC-VCHSSDFGKI 516 (690)
T ss_dssp TCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC--SSSE-EECCCSSCCC
T ss_pred CCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE--CCee-EeecCCCCCe
Confidence 47877 7798 455666 999999999999742 52 88899997 4789 688 888
Q ss_pred CCCCCCCCCCCcccCCCCCCCccC---CCCCCCCCcCcccccCCCcceecCCCCccCCCc
Q psy9819 89 TGDHCQYCRAGSYGNATTQEGCRK---CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145 (377)
Q Consensus 89 ~G~~C~~C~~g~~g~~c~~~~C~~---~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~ 145 (377)
+|.+||. +...|.. .+|.++| +|.. +.|.|.+||+|.+|+
T Consensus 517 ~G~~Ce~----------~~~~C~~~~~~~C~~~G-----~C~~--g~C~C~~Gy~G~~Ce 559 (690)
T 3fcs_B 517 TGKYCEC----------DDFSCVRYKGEMCSGHG-----QCSC--GDCLCDSDWTGYYCN 559 (690)
T ss_dssp BSTTSCB----------CSSCCCBSSSSBGGGSE-----EEET--TEEEECTTEESSSSC
T ss_pred eCCCcCc----------ccCcCcCCCCCCCCCCC-----EecC--CeeECcCCCcCCCCc
Confidence 8888862 1123432 2466655 7863 899999999999987
No 6
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.56 E-value=2.8e-15 Score=145.82 Aligned_cols=130 Identities=26% Similarity=0.615 Sum_probs=102.8
Q ss_pred eeeecCCCCccCCCCCCC-CCCCCceeecCCCcccCCCCCCCCCCCCC-CCCCcccCCCCCCCcc-CCCCCCCCCcCccc
Q psy9819 49 YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGV 125 (377)
Q Consensus 49 ~~C~C~~G~~G~~C~~~C-~C~~~g~C~~~~~~C~~C~~g~~G~~C~~-C~~g~~g~~c~~~~C~-~~~C~~~g~~~~g~ 125 (377)
+.|.|++||+|+.|+..| +|.++|+|+..++.| .|++||+|.+|+. |.++|+|..|.. .|. ...|.+++ +
T Consensus 185 ~~c~C~~g~~G~~C~~~C~~C~~~G~C~~~~g~C-~C~~G~~G~~Ce~~C~~g~~g~~C~~-~C~~~~~C~~~g-----~ 257 (423)
T 2gy5_A 185 IVRRCEAQKWGPECNHLCTACMNNGVCHEDTGEC-ICPPGFMGRTCEKACELHTFGRTCKE-RCSGQEGCKSYV-----F 257 (423)
T ss_dssp EECSSCTTEESTTSCEECCCCCTTCEECTTTCCE-ECCTTEESTTSCEECCTTEESTTSCE-ECCSTTTTTTCC-----E
T ss_pred cCCcCCCCCCCCCCCCCCCCCCCCCEEECCCCcE-eCCCCccCCCcccccCCCCCCCCcCc-cCCCCCCCCCCC-----E
Confidence 368999999999999878 799999999888999 7999999999996 999999988762 232 12344444 7
Q ss_pred ccCCCcceecCCCCccCCCcc-CCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCccCCC
Q psy9819 126 CDSITGECICQDNTQGKNCER-CLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDT 194 (377)
Q Consensus 126 C~~~~g~C~C~~g~~G~~C~~-C~~G~~g~~~~~~~C~~~C~~~g~~~~~~~~~~g~~~~c~~G~~G~~C 194 (377)
|...++.|.|++||.|.+|+. |.+||+|..++. .| .|.+.+.+. +..+ ..|++||+|.+|
T Consensus 258 C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~-~C--~C~ngg~C~----~~~~--C~C~~G~~G~~C 318 (423)
T 2gy5_A 258 CLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKL-RC--SCNNGEMCD----RFQG--CLCSPGWQGLQC 318 (423)
T ss_dssp EETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCC-BC--CCTTCCEEE----TTTE--EECCTTCBSTTS
T ss_pred ECCCCCeEEeCCCcccccccCccCCCCcCCcccc-cc--cCCCCCEec----CCCc--eECCCCCcCCCC
Confidence 877789999999999999996 999999984432 22 566665443 2222 378999999998
No 7
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.55 E-value=4.8e-15 Score=139.33 Aligned_cols=159 Identities=23% Similarity=0.536 Sum_probs=57.5
Q ss_pred cCCCCCCCccCCCCCCCCCcCcccccCCCcceecCCCCccCCCccCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9819 102 GNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS 181 (377)
Q Consensus 102 g~~c~~~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~~C~~~C~~~g~~~~~~~~~~g~ 181 (377)
+..|....|. .+|.++| +|.. .+.|.|.+||+|.+|+. ..|...|.+.+.+.. .+.
T Consensus 143 ~~~C~~~~C~-~~C~~~G-----~C~~-~~~C~C~~G~~G~~C~~------------~~C~~~C~~~G~C~~-----~~~ 198 (324)
T 2ygq_A 143 FKTCQQAECP-GGCRNGG-----FCNE-RRICECPDGFHGPHCEK------------ALCTPRCMNGGLCVT-----PGF 198 (324)
T ss_dssp EEEECCCCCS-SCCCSSC-----EECT-TSCEECCTTEESSSSCE------------ESSSSCCCTTCEECS-----SCC
T ss_pred cccccCCCCC-CCCCCCC-----EECC-CCeEECCCCCcCCCCCC------------CCCCCCCCCCCEEcC-----CCE
Confidence 3333333443 3688777 8875 68999999999999984 134446666664432 122
Q ss_pred cccCCCCCccCCCCCCccccccccccCCCCCCCCceeEEeecCCCCCcCCCCceEeeCCCCccccccCcccCCCcccCCc
Q psy9819 182 GLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFC 261 (377)
Q Consensus 182 ~~~c~~G~~G~~Cp~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C 261 (377)
..|.+||+|..|....|. ..|..+ ..|
T Consensus 199 -C~C~~G~~G~~C~~~~C~---------------------------~~C~~~-------------------------G~C 225 (324)
T 2ygq_A 199 -CICPPGFYGVNCDKANCS---------------------------TTCFNG-------------------------GTC 225 (324)
T ss_dssp -EECCTTCBTTTTCBCCCS---------------------------SCCCSS-------------------------CCB
T ss_pred -EeCCCCccCCCcccCcCC---------------------------CCCCCC-------------------------Cee
Confidence 278899999987211111 112111 112
Q ss_pred CCCCcCCCcceecCCCeeEeccCCCCCCCCCcc-cccccCCCCCCCCCCeecC-CcccCCCCCCCCCCCCCCCCCCccCC
Q psy9819 262 TEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNA-TYQIFSCPDKCPENRTCIN-NQCVCPPRRTGPDCQEEICPNECHEF 339 (377)
Q Consensus 262 ~~~~~~~p~~c~~~sG~~~v~~~s~~c~~GF~g-~~~~~~C~~~C~~~g~C~~-g~C~C~~G~~G~~C~~~~C~~~C~~~ 339 (377)
.. ...+.|.+||.| .++++.|+.+|.++|+|+. .+|.|++||+|.+|+.+.|+..|.++
T Consensus 226 ~~-------------------~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~ 286 (324)
T 2ygq_A 226 FY-------------------PGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAH 286 (324)
T ss_dssp SC-------------------SSCBCCCTTCCTTTTC-------------------------------------------
T ss_pred CC-------------------CCeeeCCCCccCCCCCcCcCCCcCCCCCEECCCCEEECCCCCcCCCCcCCCCCCCCCCC
Confidence 11 123566788998 6777789888999999975 58999999999999988888777654
Q ss_pred -----CceEEeCCCCCCCCCCC
Q psy9819 340 -----LNHGTCDLLLTGVHITH 356 (377)
Q Consensus 340 -----~~~c~C~~g~~G~~C~~ 356 (377)
.++|.|.+||+|.+|+.
T Consensus 287 g~C~~~~~C~C~~G~~G~~C~~ 308 (324)
T 2ygq_A 287 GTCHEPNKCQCQEGWHGRHCNK 308 (324)
T ss_dssp ----------------------
T ss_pred CEECCCCEeECCCCCcCCCCCC
Confidence 47889999999999984
No 8
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.49 E-value=2e-17 Score=148.86 Aligned_cols=80 Identities=8% Similarity=-0.053 Sum_probs=60.1
Q ss_pred ccCCCCCCCCCCeecCC----cccCCCCCCCCCCCCCC--CCC-------CccCC-CceEEeCCCCCCCCC----CCCCe
Q psy9819 298 IFSCPDKCPENRTCINN----QCVCPPRRTGPDCQEEI--CPN-------ECHEF-LNHGTCDLLLTGVHI----THGRT 359 (377)
Q Consensus 298 ~~~C~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~--C~~-------~C~~~-~~~c~C~~g~~G~~C----~~g~~ 359 (377)
++.+..+|.++|+|+++ +|.|++||+|.+|+.++ |.+ .|.+. ...+.|.+++.+..| .+|+|
T Consensus 167 i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGt 246 (267)
T 4fbr_A 167 VINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGK 246 (267)
T ss_dssp EEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTS
T ss_pred cccCCCCCCCCCEeeCCCCCeEEeCCCCccccccccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCE
Confidence 33445679999999887 69999999999999764 211 12221 123447888877654 58999
Q ss_pred ecccccCeeeecCCCeeC
Q psy9819 360 LHYQVDLIRCTCRQVYLI 377 (377)
Q Consensus 360 ~~~~~~~~~c~~~~~~~~ 377 (377)
|++.+++|+|.|++||+.
T Consensus 247 C~dg~~sy~CeCp~GF~G 264 (267)
T 4fbr_A 247 TLAGTMIYNGEGPIGFRA 264 (267)
T ss_dssp EEEEEEEETTSCCEEEEE
T ss_pred eeCCCcceeecCCCCccc
Confidence 999999999999999973
No 9
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.48 E-value=1.1e-14 Score=124.29 Aligned_cols=80 Identities=30% Similarity=0.712 Sum_probs=55.7
Q ss_pred CeeeecCCCCccCCCCCCC----CCCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccCCCCC-CCCCcC
Q psy9819 48 DYSCQCELGWTGVDCSVNC----LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN-SHGNSV 122 (377)
Q Consensus 48 ~~~C~C~~G~~G~~C~~~C----~C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~~~C~-~~g~~~ 122 (377)
.+.|+|++||+|..|+..| .|.++++|+. +++| .|++||+|..|+. ..|.. .|. .+|
T Consensus 16 ~~~c~C~~g~~G~~C~~~C~~~~~c~~~g~C~~-~g~C-~C~~G~~G~~C~~------------~~C~~-~C~~~~g--- 77 (169)
T 2vj2_A 16 RSAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQ-NGNK-TCMEGWMGPECNR------------AICRQ-GCSPKHG--- 77 (169)
T ss_dssp -----CCTTEETTTTCEECCCEEETTEEEEECS-SCCE-EECTTEESTTSCE------------ECCCT-TCCTTTE---
T ss_pred CeeeeCCCcCcCCCcccccCCCCCcCCCCEeCC-CCee-ECCCCCcCCCCCC------------CCCCC-CCCCCCc---
Confidence 5689999999999999766 3777889974 7889 6888888877753 22322 343 333
Q ss_pred cccccCCCcceecCCCCccCCCccCC
Q psy9819 123 LGVCDSITGECICQDNTQGKNCERCL 148 (377)
Q Consensus 123 ~g~C~~~~g~C~C~~g~~G~~C~~C~ 148 (377)
+|.. +++|.|++||+|..|++|.
T Consensus 78 --~C~~-~~~C~C~~G~~G~~C~~C~ 100 (169)
T 2vj2_A 78 --SCKL-PGDCRCQYGWQGLYCDKCI 100 (169)
T ss_dssp --ECSS-TTCCEECTTEESSSSCEEC
T ss_pred --ccCC-CCeeECCCCCCCCCcccCC
Confidence 6765 6899999999999998654
No 10
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.45 E-value=9.6e-14 Score=134.95 Aligned_cols=106 Identities=31% Similarity=0.768 Sum_probs=86.6
Q ss_pred CCCcCC---CCCC-CeecCCCCeeeecCCCCccCCCCCC-------------C----CCCCCceeecCCCcccCCCCCCC
Q psy9819 31 ASLCYN---KCIY-GYCKGPPDYSCQCELGWTGVDCSVN-------------C----LCNNHSTCVHGIGICDECHDWTT 89 (377)
Q Consensus 31 ~~~C~~---~C~~-G~C~~~~~~~C~C~~G~~G~~C~~~-------------C----~C~~~g~C~~~~~~C~~C~~g~~ 89 (377)
++.|.. ||++ |+|+. .+++|.|++||+|..|++. | .|.++++|...++.| .|++||+
T Consensus 195 G~~C~~~C~~C~~~G~C~~-~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C-~C~~G~~ 272 (423)
T 2gy5_A 195 GPECNHLCTACMNNGVCHE-DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGC-SCATGWK 272 (423)
T ss_dssp STTSCEECCCCCTTCEECT-TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEE-ECCBTCB
T ss_pred CCCCCCCCCCCCCCCEEEC-CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeE-EeCCCcc
Confidence 345553 7865 99995 5689999999999999852 2 256677888889999 7999999
Q ss_pred CCCCCC-CCCCcccCCCCCCCccCCCCCCCCCcCcccccCCCcceecCCCCccCCCccCC
Q psy9819 90 GDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL 148 (377)
Q Consensus 90 G~~C~~-C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~C~ 148 (377)
|.+|+. |.+||+|..|+. +++|.+++ +|+...+ |.|++||+|.+|+.+.
T Consensus 273 G~~C~~~C~~G~~G~~C~~----~C~C~ngg-----~C~~~~~-C~C~~G~~G~~Ce~~~ 322 (423)
T 2gy5_A 273 GLQCNEACHPGFYGPDCKL----RCSCNNGE-----MCDRFQG-CLCSPGWQGLQCEREG 322 (423)
T ss_dssp SGGGCBCCCTTBCSBTTCC----BCCCTTCC-----EEETTTE-EECCTTCBSTTSCBCS
T ss_pred cccccCccCCCCcCCcccc----cccCCCCC-----EecCCCc-eECCCCCcCCCCccCc
Confidence 999996 999999998873 46788877 8876544 9999999999999753
No 11
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.30 E-value=5.9e-13 Score=135.60 Aligned_cols=68 Identities=31% Similarity=0.786 Sum_probs=50.5
Q ss_pred CCCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccCC----CCCCCCCcCcccccCCCcceecC------
Q psy9819 67 LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC----DCNSHGNSVLGVCDSITGECICQ------ 136 (377)
Q Consensus 67 ~C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~~----~C~~~g~~~~g~C~~~~g~C~C~------ 136 (377)
.|+++|+|. .++| .|.+||+|.+|+ |..++++.......|... .|.++| +|. .++|.|.
T Consensus 436 ~Cs~~G~C~--~g~C-~C~~Gy~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Cs~~G-----~C~--~G~C~C~~~~~~~ 504 (687)
T 3k6s_B 436 LCHGKGFLE--CGIC-RCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLG-----DCV--CGQCLCHTSDVPG 504 (687)
T ss_dssp TGGGSEEES--SSSE-EECSSEESTTSC-EESSSCCCSGGGSTTSSSTTSCGGGSSE-----EEE--TTEEEECCCCSTT
T ss_pred CCCCCCEEe--CCEe-EcCCCCcCCccc-ccCCcCCccccCCCCCCCCCCCcCCCCC-----EEe--CCEEEcCCCCCCC
Confidence 577788887 5789 799999999998 776665543222345432 377666 887 5799999
Q ss_pred CCCccCCCc
Q psy9819 137 DNTQGKNCE 145 (377)
Q Consensus 137 ~g~~G~~C~ 145 (377)
+||.|.+|+
T Consensus 505 ~G~~G~~Ce 513 (687)
T 3k6s_B 505 KLIYGQYCE 513 (687)
T ss_dssp CCEESTTSC
T ss_pred CCccccccc
Confidence 999999997
No 12
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.29 E-value=1.6e-12 Score=130.34 Aligned_cols=115 Identities=30% Similarity=0.673 Sum_probs=59.2
Q ss_pred CCcccCCCCCCCCCCCCCCCCCcccCCCCC-CCccCCCCCCCCCcC-cccccCCCcceecCCCCccCCCccCCCCccCCC
Q psy9819 78 IGICDECHDWTTGDHCQYCRAGSYGNATTQ-EGCRKCDCNSHGNSV-LGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155 (377)
Q Consensus 78 ~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~-~~C~~~~C~~~g~~~-~g~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~ 155 (377)
.+.| .|.++|.|.+|+.|++||+|..+.. ..|.+++|.+++... .+.|+..++.|.|++||+|.+|++|.+||++..
T Consensus 406 ~~~C-~C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~ 484 (525)
T 4aqs_A 406 AGQC-RCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLS 484 (525)
T ss_dssp SSCC-CBCTTEETTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC---------
T ss_pred CCcc-CCCCCCCCCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCC
Confidence 4678 7999999999999999999998875 678999998877643 357887789999999999999999999999987
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCCCCCCcccCCCCCccCCC
Q psy9819 156 TDGGTCYY-QCMARGMLTGPGPQGLGSGLAERNAWEGKDT 194 (377)
Q Consensus 156 ~~~~~C~~-~C~~~g~~~~~~~~~~g~~~~c~~G~~G~~C 194 (377)
.+...|.. .|++.+.+...|....|.+ .|++||+|+.|
T Consensus 485 ~~~~~C~~C~C~~~gs~~~~C~~~tG~C-~C~~G~~G~~C 523 (525)
T 4aqs_A 485 NDLDGCRPCDCDLGGALNNSCSEDSGQC-SCLPHMIGRQC 523 (525)
T ss_dssp ----------------------------------------
T ss_pred CCCCCCcCCCCCCCCccCCccCCCCCee-ECCCCCcCCCC
Confidence 66666765 7888887777776655555 68999999987
No 13
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.26 E-value=5.6e-12 Score=103.33 Aligned_cols=99 Identities=31% Similarity=0.772 Sum_probs=74.6
Q ss_pred CCCcC---CCCCC-CeecCC-CCeeeecCCCCccCCCCC---CC---CCCCCceeec--CCCcccCCCCCCCCCCCCCCC
Q psy9819 31 ASLCY---NKCIY-GYCKGP-PDYSCQCELGWTGVDCSV---NC---LCNNHSTCVH--GIGICDECHDWTTGDHCQYCR 97 (377)
Q Consensus 31 ~~~C~---~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~---~C---~C~~~g~C~~--~~~~C~~C~~g~~G~~C~~C~ 97 (377)
+..|. +||++ |+|++. ++|+|+|++||+|..|++ +| +|.++++|+. +.++| .|++||+|.+|+.
T Consensus 5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C-~C~~G~~G~~C~~-- 81 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQC-ICMPGYEGVHCEV-- 81 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEE-ECCTTEESSSSCE--
T ss_pred cccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCcee-eCCCCCcCCccee--
Confidence 45564 68976 899864 489999999999999974 34 6888899984 45789 6887777777752
Q ss_pred CCcccCCCCCCCccCCCCCCCCCcCcccccCC--CcceecCCCCccCCCc
Q psy9819 98 AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSI--TGECICQDNTQGKNCE 145 (377)
Q Consensus 98 ~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~~~--~g~C~C~~g~~G~~C~ 145 (377)
..+.|...+|.+++ +|... .+.|.|++||+|.+|+
T Consensus 82 --------~~~~C~~~~C~~~g-----~C~~~~g~~~C~C~~G~~G~~C~ 118 (135)
T 2vj3_A 82 --------NTDECASSPCLHNG-----RCLDKINEFQCECPTGFTGHLCQ 118 (135)
T ss_dssp --------ECCTTTTCCSTTTC-----EEEECSSCEEEECCTTEESSSSC
T ss_pred --------cCCcccCCCcCCCC-----EeECCCCCeEEECCCCCcCCccC
Confidence 12456666787766 77643 3589999999999987
No 14
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.19 E-value=1.8e-11 Score=124.80 Aligned_cols=52 Identities=33% Similarity=0.924 Sum_probs=41.1
Q ss_pred CCC-CCeecCCCCeeeecCCCCccCCCCC------------CCC-------CCCCceeecCCCcccCCC------CCCCC
Q psy9819 37 KCI-YGYCKGPPDYSCQCELGWTGVDCSV------------NCL-------CNNHSTCVHGIGICDECH------DWTTG 90 (377)
Q Consensus 37 ~C~-~G~C~~~~~~~C~C~~G~~G~~C~~------------~C~-------C~~~g~C~~~~~~C~~C~------~g~~G 90 (377)
+|. ||+|. .+.|.|++||+|..|+. .|. |+++|+|. .+.| .|. +||+|
T Consensus 436 ~Cs~~G~C~---~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~G~C-~C~~~~~~~~G~~G 509 (687)
T 3k6s_B 436 LCHGKGFLE---CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQC-LCHTSDVPGKLIYG 509 (687)
T ss_dssp TGGGSEEES---SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE--TTEE-EECCCCSTTCCEES
T ss_pred CCCCCCEEe---CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe--CCEE-EcCCCCCCCCCccc
Confidence 564 57777 35899999999999982 352 88899998 4689 788 88888
Q ss_pred CCCC
Q psy9819 91 DHCQ 94 (377)
Q Consensus 91 ~~C~ 94 (377)
.+|+
T Consensus 510 ~~Ce 513 (687)
T 3k6s_B 510 QYCE 513 (687)
T ss_dssp TTSC
T ss_pred cccc
Confidence 8886
No 15
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.19 E-value=4.7e-12 Score=107.87 Aligned_cols=97 Identities=28% Similarity=0.654 Sum_probs=75.0
Q ss_pred CCeecCCCCeeeecCCCCccCCCCC-CC--CCC-CCceeecCCCcccCCCCCCCCCCCC-------------------CC
Q psy9819 40 YGYCKGPPDYSCQCELGWTGVDCSV-NC--LCN-NHSTCVHGIGICDECHDWTTGDHCQ-------------------YC 96 (377)
Q Consensus 40 ~G~C~~~~~~~C~C~~G~~G~~C~~-~C--~C~-~~g~C~~~~~~C~~C~~g~~G~~C~-------------------~C 96 (377)
||+|+. .++|+|++||+|.+|++ .| .|. .+|+|+. +++| .|++||+|..|+ .|
T Consensus 43 ~g~C~~--~g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~-~~~C-~C~~G~~G~~C~~C~~~~~C~~g~C~~~~~C~C 118 (169)
T 2vj2_A 43 HYACDQ--NGNKTCMEGWMGPECNRAICRQGCSPKHGSCKL-PGDC-RCQYGWQGLYCDKCIPHPGCVHGICNEPWQCLC 118 (169)
T ss_dssp EEEECS--SCCEEECTTEESTTSCEECCCTTCCTTTEECSS-TTCC-EECTTEESSSSCEECCCTTCSSEECSSTTCCEE
T ss_pred CCEeCC--CCeeECCCCCcCCCCCCCCCCCCCCCCCcccCC-CCee-ECCCCCCCCCcccCCCCCCCCCCCcCCCCEEeC
Confidence 478975 45899999999999985 34 465 6778875 6889 799999999886 36
Q ss_pred CCCcccCCCCC--CCccC-CCCCCCCCcCcccccC---CCcceecCCCCccCCCc
Q psy9819 97 RAGSYGNATTQ--EGCRK-CDCNSHGNSVLGVCDS---ITGECICQDNTQGKNCE 145 (377)
Q Consensus 97 ~~g~~g~~c~~--~~C~~-~~C~~~g~~~~g~C~~---~~g~C~C~~g~~G~~C~ 145 (377)
++||+|..|+. +.|.. .+|.+++ +|.. ..++|.|++||+|.+|+
T Consensus 119 ~~G~~G~~C~~~~~~C~~~~~C~~~g-----~C~~~~~~~~~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 119 ETNWGGQLCDKDLNYCGTHQPCLNGG-----TCSNTGPDKYQCSCPEGYSGPNCE 168 (169)
T ss_dssp CTTEETTTTCEESCHHHHTCCCCTTC-----EEEECSTTCEEEECCTTCCSTTSC
T ss_pred CCCCCCCcccCCCCCCCCCCCCCCCC-----EEcCCCCCCcEeECCCCCcCcCcC
Confidence 67888888873 55764 5788776 7754 24689999999999886
No 16
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.17 E-value=3.1e-11 Score=99.80 Aligned_cols=95 Identities=33% Similarity=0.761 Sum_probs=70.3
Q ss_pred CCCCC-CeecCC---CCeeeecCCCCccCCCCC---------------CC---CCCCCceeec---------CCCcccCC
Q psy9819 36 NKCIY-GYCKGP---PDYSCQCELGWTGVDCSV---------------NC---LCNNHSTCVH---------GIGICDEC 84 (377)
Q Consensus 36 ~~C~~-G~C~~~---~~~~C~C~~G~~G~~C~~---------------~C---~C~~~g~C~~---------~~~~C~~C 84 (377)
+||++ |+|+.. ++|+|.|++||+|..|+. +| +|.++++|+. ..++| .|
T Consensus 6 ~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C-~C 84 (143)
T 4d90_A 6 NPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVC-KC 84 (143)
T ss_dssp CCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEE-EC
T ss_pred CcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEe-EC
Confidence 68976 899863 479999999999999974 23 4888899972 35678 67
Q ss_pred CCCCCCCCCCCCCCCcccCCCCCCCccCCCCCCCCCcCcccccCCC--cceecCCCCccCCCcc
Q psy9819 85 HDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSIT--GECICQDNTQGKNCER 146 (377)
Q Consensus 85 ~~g~~G~~C~~C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~~~~--g~C~C~~g~~G~~C~~ 146 (377)
++||+|.+|+. +.++|...+|.+++ +|.... ++|.|++||+|.+|+.
T Consensus 85 ~~G~~G~~C~~----------~i~~C~~~~C~~~~-----~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 85 PRGFNGIHCQH----------NINECEVEPCKNGG-----ICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp CTTEESTTSCE----------ECCTTTTCCSCTTC-----EEEEETTEEEEECCTTCBSTTSCB
T ss_pred cCCCcCCCccc----------CCCcCCCCCCCCCC-----EeECCCCCeEeECCCCCccCCcee
Confidence 77777777652 13567666787776 776433 4899999999999974
No 17
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.12 E-value=7.8e-11 Score=120.37 Aligned_cols=114 Identities=31% Similarity=0.740 Sum_probs=84.4
Q ss_pred CC-CCeecCCCCeeeecC----CCCccCCCCC---CC------CCCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccC
Q psy9819 38 CI-YGYCKGPPDYSCQCE----LGWTGVDCSV---NC------LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGN 103 (377)
Q Consensus 38 C~-~G~C~~~~~~~C~C~----~G~~G~~C~~---~C------~C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~ 103 (377)
|. ||+|+ .++|.|+ +||+|..|+. .| .|.++|+|.. +.| .|.+||+|..|+ |+.
T Consensus 495 Cs~~G~C~---~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~--g~C-~C~~Gy~G~~Ce-C~~----- 562 (690)
T 3fcs_B 495 CSQRGECL---CGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC--GDC-LCDSDWTGYYCN-CTT----- 562 (690)
T ss_dssp GGGSEEEC---SSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET--TEE-EECTTEESSSSC-EEC-----
T ss_pred CCCCCEEE---CCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC--Cee-ECcCCCcCCCCc-cCC-----
Confidence 75 48898 3699999 9999999973 45 3888899976 889 788999888886 221
Q ss_pred CCCCCCccC---CCCCCCCCcCcccccCCCcceec-CCCCccCCCccCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9819 104 ATTQEGCRK---CDCNSHGNSVLGVCDSITGECIC-QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGL 179 (377)
Q Consensus 104 ~c~~~~C~~---~~C~~~g~~~~g~C~~~~g~C~C-~~g~~G~~C~~C~~G~~g~~~~~~~C~~~C~~~g~~~~~~~~~~ 179 (377)
....|.. .+|.++| +|. .+.|.| .+||+|.+|+.|+ .|...|...+
T Consensus 563 --~~~~C~~~~g~~C~~~G-----~C~--~g~C~C~~~Gy~G~~Ce~C~-----------~C~~~C~~~g---------- 612 (690)
T 3fcs_B 563 --RTDTCMSSNGLLCSGRG-----KCE--CGSCVCIQPGSYGDTCEKCP-----------TCPDACTFKK---------- 612 (690)
T ss_dssp --CCTTTBCTTSSBTSSSC-----EEE--TTEEECCSTTCBSTTSCBCT-----------TSCCTTTSCC----------
T ss_pred --CCCcccCCCCCCCCCCC-----EEe--CCEEECCCCCccCCCcCcCC-----------CCCCCCCCCC----------
Confidence 1234443 4577777 886 479999 9999999999764 3434566665
Q ss_pred CCcccCCCCCccCCC
Q psy9819 180 GSGLAERNAWEGKDT 194 (377)
Q Consensus 180 g~~~~c~~G~~G~~C 194 (377)
.+..|..+|+|..|
T Consensus 613 -~Cv~C~~g~tG~~C 626 (690)
T 3fcs_B 613 -ECVECKKFDRGALH 626 (690)
T ss_dssp -GGGTTTTTCCSSSS
T ss_pred -CcccCCCCCccCCC
Confidence 44458899999976
No 18
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.09 E-value=2e-12 Score=111.94 Aligned_cols=131 Identities=18% Similarity=0.433 Sum_probs=89.1
Q ss_pred CCCCCCCeecCC-CCeeeecCCCCccC---CCCC--CCC-------CCCCceeec-------CCCcccCCCCCCCCCCCC
Q psy9819 35 YNKCIYGYCKGP-PDYSCQCELGWTGV---DCSV--NCL-------CNNHSTCVH-------GIGICDECHDWTTGDHCQ 94 (377)
Q Consensus 35 ~~~C~~G~C~~~-~~~~C~C~~G~~G~---~C~~--~C~-------C~~~g~C~~-------~~~~C~~C~~g~~G~~C~ 94 (377)
++||+||+|++. ++|+|.|++||+|. .|+. +|. |.++++|+. ++++| .|++||+|..++
T Consensus 10 ~~pC~ng~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C-~C~~G~~g~~~~ 88 (186)
T 1z1y_A 10 DTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXC-GCIEGYTLXEDT 88 (186)
T ss_dssp TCCCBTEEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEE-EECTTEEEETTE
T ss_pred CCCCCCCEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEEC-CCCCCCccCCCC
Confidence 368999999864 48999999999997 6752 343 777788973 45678 577777766541
Q ss_pred CCCCCcccCCCCCCCccCCCCCCCCCcCccccc----CC--CcceecCCCCcc-----CCCccCCCCccCCCCCCCCCCC
Q psy9819 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCD----SI--TGECICQDNTQG-----KNCERCLPGYYGDPTDGGTCYY 163 (377)
Q Consensus 95 ~C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~----~~--~g~C~C~~g~~G-----~~C~~C~~G~~g~~~~~~~C~~ 163 (377)
| ..++|...+|.+++ +|. .. .+.|.|++||+| ..|+.= +...|..
T Consensus 89 -C---------~~d~C~~~~C~~~g-----~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~---------~~~~C~~ 144 (186)
T 1z1y_A 89 -C---------VLDVCQYXNCGESG-----ECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT---------GETACQL 144 (186)
T ss_dssp -E---------EEGGGTTCCCCTTE-----EEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE---------ECCCCCC
T ss_pred -C---------CCCcCcCCCCCCCC-----EEeeCCcCCCCCceEECCCCCcccCCCCCcceEc---------CCCcccc
Confidence 2 12456666677666 775 43 348999999988 556520 0123443
Q ss_pred CC-CCCCCCCCCCCCCCCCcc-cCCCCCccCCC
Q psy9819 164 QC-MARGMLTGPGPQGLGSGL-AERNAWEGKDT 194 (377)
Q Consensus 164 ~C-~~~g~~~~~~~~~~g~~~-~c~~G~~G~~C 194 (377)
.| ...+ +|.+..++|. .|++||+|..+
T Consensus 145 ~C~~~~~----~C~n~~g~y~C~C~~G~~g~~~ 173 (186)
T 1z1y_A 145 XCNTDNE----VCXNVEGVYXCQCMEGFTFDXE 173 (186)
T ss_dssp CCCTTTE----EEEEETTEEEEEECTTCEEETT
T ss_pred cccccCc----ceecCCCCeeeECCCCCccCcc
Confidence 45 3333 4566678888 99999999986
No 19
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.08 E-value=1.3e-10 Score=95.01 Aligned_cols=80 Identities=26% Similarity=0.592 Sum_probs=56.2
Q ss_pred ccCCC---CCCCCCCeecCC----cccCCCCCCCCCCCCC--CCC-CCccCC--------CceEEeCCCCCCCCCC----
Q psy9819 298 IFSCP---DKCPENRTCINN----QCVCPPRRTGPDCQEE--ICP-NECHEF--------LNHGTCDLLLTGVHIT---- 355 (377)
Q Consensus 298 ~~~C~---~~C~~~g~C~~g----~C~C~~G~~G~~C~~~--~C~-~~C~~~--------~~~c~C~~g~~G~~C~---- 355 (377)
+++|. ++|.++|+|++. +|.|++||+|..|+++ .|. ++|.++ .++|+|++||+|..|+
T Consensus 5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~ 84 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTD 84 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECC
T ss_pred cccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCC
Confidence 45563 457777777544 6778888888777632 242 344432 2567778888777664
Q ss_pred --------CCCeecccccCeeeecCCCeeC
Q psy9819 356 --------HGRTLHYQVDLIRCTCRQVYLI 377 (377)
Q Consensus 356 --------~g~~~~~~~~~~~c~~~~~~~~ 377 (377)
++++|++..++|+|+|++||++
T Consensus 85 ~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G 114 (135)
T 2vj3_A 85 ECASSPCLHNGRCLDKINEFQCECPTGFTG 114 (135)
T ss_dssp TTTTCCSTTTCEEEECSSCEEEECCTTEES
T ss_pred cccCCCcCCCCEeECCCCCeEEECCCCCcC
Confidence 6789999999999999999974
No 20
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.04 E-value=2.4e-10 Score=94.41 Aligned_cols=37 Identities=19% Similarity=0.342 Sum_probs=28.3
Q ss_pred ceEEeCCCCCCCCC------------CCCCeecccccCeeeecCCCeeC
Q psy9819 341 NHGTCDLLLTGVHI------------THGRTLHYQVDLIRCTCRQVYLI 377 (377)
Q Consensus 341 ~~c~C~~g~~G~~C------------~~g~~~~~~~~~~~c~~~~~~~~ 377 (377)
++|.|++||+|..| .++++|++..++|+|+|++||++
T Consensus 80 ~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G 128 (143)
T 4d90_A 80 YVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMG 128 (143)
T ss_dssp EEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBS
T ss_pred eEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCcc
Confidence 34556666655555 47899999999999999999974
No 21
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=98.98 E-value=4.1e-10 Score=107.42 Aligned_cols=92 Identities=33% Similarity=0.828 Sum_probs=72.5
Q ss_pred CCCCCCCce-eecC------CCcccCCCCCCCCCCCCCCCCCcccCCCC------CCCccCCCCCCCCCcCc--------
Q psy9819 65 NCLCNNHST-CVHG------IGICDECHDWTTGDHCQYCRAGSYGNATT------QEGCRKCDCNSHGNSVL-------- 123 (377)
Q Consensus 65 ~C~C~~~g~-C~~~------~~~C~~C~~g~~G~~C~~C~~g~~g~~c~------~~~C~~~~C~~~g~~~~-------- 123 (377)
.|.|++|+. |+.. +++| .|.++++|.+||.|++||+|.... ...|.+|.|++++....
T Consensus 265 ~C~CnGHA~~C~~~~~~~~~~g~C-~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~ 343 (403)
T 2y38_A 265 RCVCHGHADVCDAKDPLDPFRLQC-ACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRR 343 (403)
T ss_dssp ECCCTTBCSCEEESCTTSTTCEEE-CCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHT
T ss_pred ccccCCCccccCCCCCCCccceEe-ECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccc
Confidence 478999985 9732 3679 899999999999999999997532 26899999998874210
Q ss_pred -c-----cccCCCccee-cCCCCccCCCccCCCCccCCCCC
Q psy9819 124 -G-----VCDSITGECI-CQDNTQGKNCERCLPGYYGDPTD 157 (377)
Q Consensus 124 -g-----~C~~~~g~C~-C~~g~~G~~C~~C~~G~~g~~~~ 157 (377)
+ .+...+|+|. |++++.|.+||+|.+||+|++..
T Consensus 344 ~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~~GYyg~p~~ 384 (403)
T 2y38_A 344 EASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ 384 (403)
T ss_dssp TCCCCTTSCSCCCEEESSCCSSEESTTSCEECTTCEECTTS
T ss_pred cccccccccCCCCCCCCCCcCcCcCCCCCcCCCCccCCCCC
Confidence 0 0123478996 99999999999999999998754
No 22
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.94 E-value=6.7e-13 Score=119.38 Aligned_cols=103 Identities=17% Similarity=0.031 Sum_probs=74.2
Q ss_pred CCCC-CeecCC-CCeeeecCCCCccCCCCCC--------------------------------C---CCCCCceee--cC
Q psy9819 37 KCIY-GYCKGP-PDYSCQCELGWTGVDCSVN--------------------------------C---LCNNHSTCV--HG 77 (377)
Q Consensus 37 ~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~~--------------------------------C---~C~~~g~C~--~~ 77 (377)
+|.+ |+|++. .+|+|+|++||+|..|++. | +|.++|+|. ..
T Consensus 39 ~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~ 118 (267)
T 4fbr_A 39 KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTT 118 (267)
T ss_dssp ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEE
T ss_pred CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCc
Confidence 4655 899863 4899999999999999741 1 355666665 34
Q ss_pred CCcccCCCCCCCCCCCCC---------------CCCC---cccCCCCC-CCccCCCCCCCCCcCcccccC--CCcceecC
Q psy9819 78 IGICDECHDWTTGDHCQY---------------CRAG---SYGNATTQ-EGCRKCDCNSHGNSVLGVCDS--ITGECICQ 136 (377)
Q Consensus 78 ~~~C~~C~~g~~G~~C~~---------------C~~g---~~g~~c~~-~~C~~~~C~~~g~~~~g~C~~--~~g~C~C~ 136 (377)
++.| .|+++|+|.+|+. |.++ +.|..++. ..|.+.+|.++| +|.. .+++|.|+
T Consensus 119 sy~C-~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg-----~C~dg~~~y~C~Cp 192 (267)
T 4fbr_A 119 TYNG-EGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGG-----KTLSGTMTYNGEGP 192 (267)
T ss_dssp EETT-SCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTT-----SEEEEEEEETTSCC
T ss_pred cEEe-eCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCC-----EeeCCCCCeEEeCC
Confidence 6789 7999999999971 3322 45666665 334555677777 6753 24689999
Q ss_pred CCCccCCCc
Q psy9819 137 DNTQGKNCE 145 (377)
Q Consensus 137 ~g~~G~~C~ 145 (377)
+||+|.+|+
T Consensus 193 ~Gf~G~~c~ 201 (267)
T 4fbr_A 193 IGFRGTLTS 201 (267)
T ss_dssp EEEEEEEEE
T ss_pred CCccccccc
Confidence 999999998
No 23
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.78 E-value=3.5e-09 Score=87.37 Aligned_cols=25 Identities=16% Similarity=0.282 Sum_probs=22.3
Q ss_pred CCCCCCeecccccCeeeecCCCeeC
Q psy9819 353 HITHGRTLHYQVDLIRCTCRQVYLI 377 (377)
Q Consensus 353 ~C~~g~~~~~~~~~~~c~~~~~~~~ 377 (377)
.|.++++|++..++|+|+|++||++
T Consensus 105 ~C~~~~~C~n~~g~y~C~C~~Gy~g 129 (143)
T 2bou_A 105 QCDSSTVCFNTVGSYSCRCRPGWKP 129 (143)
T ss_dssp CCCTTSEEEECSSCEEEECCSSSCB
T ss_pred CCCCCCEEECCCCCEEeeCCCCccc
Confidence 5778899999999999999999963
No 24
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.77 E-value=3e-09 Score=93.66 Aligned_cols=89 Identities=30% Similarity=0.880 Sum_probs=62.7
Q ss_pred CCC-CCeecCCCCeeeecCCCCccCCCCCC------------C-------CCCCCceeecCCCcccCCCCCC------CC
Q psy9819 37 KCI-YGYCKGPPDYSCQCELGWTGVDCSVN------------C-------LCNNHSTCVHGIGICDECHDWT------TG 90 (377)
Q Consensus 37 ~C~-~G~C~~~~~~~C~C~~G~~G~~C~~~------------C-------~C~~~g~C~~~~~~C~~C~~g~------~G 90 (377)
.|. ||+|+. +.|.|++||+|..|+.+ | +|+++|+|+. ++| .|.++| +|
T Consensus 97 ~Csg~G~C~~---g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~--g~C-~C~~gw~~~~~~~G 170 (217)
T 2p28_B 97 LCHGKGFLEC---GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--GQC-LCHTSDVPGKLIYG 170 (217)
T ss_dssp TTTTSEEEET---TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET--TEE-EECCCCSTTCCEES
T ss_pred ccCCCceEEC---CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC--Cce-ECCCCCCCcccEEC
Confidence 464 588983 58999999999999831 3 4778889984 679 788884 66
Q ss_pred CCCCCCCCCcccCCCCCCCccCC---CCCCCCCcCcccccCCCcceecCCCCccCCCcc
Q psy9819 91 DHCQYCRAGSYGNATTQEGCRKC---DCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146 (377)
Q Consensus 91 ~~C~~C~~g~~g~~c~~~~C~~~---~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~ 146 (377)
.+|+. . ...|... +|.++. +|+|. .++|.|.+||+|.+|+.
T Consensus 171 ~~Ce~-~---------~~~C~~~~g~~C~~~~---~G~C~--~g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 171 QYCEC-D---------TINCERYNGQVCGGPG---RGLCF--CGKCRCHPGFEGSACQH 214 (217)
T ss_dssp TTSCE-E---------SSCSCEETTEETTCTT---TEEEE--TTEEEECTTEESTTSCE
T ss_pred CCccc-C---------CccCCCCCCCCCCCCC---CcEEe--CCeeECCCCCccCCcCC
Confidence 66641 0 2334432 466651 13887 47999999999999973
No 25
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=98.77 E-value=2.4e-09 Score=101.75 Aligned_cols=89 Identities=31% Similarity=0.734 Sum_probs=69.3
Q ss_pred CCCCCCce-ee---cCCCcccCCCCCCCCCCCCCCCCCcccCCCCC------CCccCCCCCCCCCcCc-----ccccCCC
Q psy9819 66 CLCNNHST-CV---HGIGICDECHDWTTGDHCQYCRAGSYGNATTQ------EGCRKCDCNSHGNSVL-----GVCDSIT 130 (377)
Q Consensus 66 C~C~~~g~-C~---~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~------~~C~~~~C~~~g~~~~-----g~C~~~~ 130 (377)
|.|++|+. |. ...+.| .|+++|+|.+|++|.+||++..+.. ..|.+|.|+.++.... ..|...+
T Consensus 255 C~Cngh~s~c~~~~~~~~~C-~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~ 333 (375)
T 4aqt_A 255 CKCNGHASECVKNEFDKLMC-NCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHG 333 (375)
T ss_dssp ECCTTSCSCEEECTTSCEEE-CCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCC
T ss_pred ecCCCCCcccCCCCCCCeee-eCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCC
Confidence 56777774 43 334567 8999999999999999999987543 5789999988774211 1234457
Q ss_pred ccee-cCCCCccCCCccCCCCccCCC
Q psy9819 131 GECI-CQDNTQGKNCERCLPGYYGDP 155 (377)
Q Consensus 131 g~C~-C~~g~~G~~C~~C~~G~~g~~ 155 (377)
|+|. |+++|+|.+|++|.+||++.+
T Consensus 334 G~C~~C~~n~~G~~Ce~C~~Gyyg~~ 359 (375)
T 4aqt_A 334 GHCTNCRDNTDGAKCERCRENFFRLG 359 (375)
T ss_dssp EEECSCTTTEESTTSCEECSSEECCT
T ss_pred CCCCCCCCCCcCCCCCCCCcCcccCc
Confidence 8995 999999999999999999974
No 26
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=98.68 E-value=1.6e-08 Score=85.87 Aligned_cols=105 Identities=21% Similarity=0.486 Sum_probs=74.9
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCc---CC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMH---RG 268 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~---~~ 268 (377)
..+|.|.|.+ +.+.+|+|+|. .|++ .|..|++.||||.. +++.+|+.... ..
T Consensus 27 ~~~C~w~I~~-------~~g~~I~l~f~-~f~le~~~~C~~D~l~i~dg~~-------------~~~~~CG~~~~~~~~~ 85 (170)
T 1szb_A 27 DQERRWTLTA-------PPGYRLRLYFT-HFDLELSHLCEYDFVKLSSGAK-------------VLATLCGQESTDTERA 85 (170)
T ss_dssp SCEEEEEEEC-------CTTEEEEEEEE-EEECCCCTTSCSSEEEEESSSS-------------EEEEECSBTTTTCSSS
T ss_pred CCcEEEEEEc-------CCCCEEEEEEE-EEEccCCCCCCCCEEEEEeCCc-------------cccccCCCCCCccccC
Confidence 5679999999 55678999887 4554 48899999999743 34778876511 13
Q ss_pred C--cceecCCCeeEeccCCCCCC----CCCccccc---ccCCCCC------CCCCCeecCC----cccCCCCCC
Q psy9819 269 Y--EVLEAKSGVMTIHYKQGKPS----EGFNATYQ---IFSCPDK------CPENRTCINN----QCVCPPRRT 323 (377)
Q Consensus 269 p--~~c~~~sG~~~v~~~s~~c~----~GF~g~~~---~~~C~~~------C~~~g~C~~g----~C~C~~G~~ 323 (377)
| ..+.+.++.|.|.|.++... .||.+.+. +++|... |++ .|++. .|.|++||+
T Consensus 86 P~~~~~~S~~n~l~v~F~Sd~~~~~~~~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 86 PGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp CTTCCEECSSSEEEEEEECCSCCSSCCCEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred CCCceEEeeCCeEEEEEeccccccCcCcCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence 5 67899999999999998753 78988543 4567421 543 56433 577777776
No 27
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.64 E-value=8.5e-09 Score=85.02 Aligned_cols=106 Identities=21% Similarity=0.452 Sum_probs=71.5
Q ss_pred CCcCCCCCC-CeecCCCCeeeecCCCCcc---------CCCCC--CC------CCCCCceee--cCCCcccCCCCCCCCC
Q psy9819 32 SLCYNKCIY-GYCKGPPDYSCQCELGWTG---------VDCSV--NC------LCNNHSTCV--HGIGICDECHDWTTGD 91 (377)
Q Consensus 32 ~~C~~~C~~-G~C~~~~~~~C~C~~G~~G---------~~C~~--~C------~C~~~g~C~--~~~~~C~~C~~g~~G~ 91 (377)
..|+++|.+ |+|++ .|+|.|++||+| ..|+. +| +|.++++|+ .++++| .|++||+|.
T Consensus 3 ~~C~~~C~~~~~C~~--~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C-~C~~Gy~g~ 79 (143)
T 2bou_A 3 RGCARWCPQDSSCVN--ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDC-VCSPGYEPV 79 (143)
T ss_dssp CCCCTTCCTTEEESS--SSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEE-EECTTEEET
T ss_pred CCCcCcCCCCCEEcC--CCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEe-ECCCCcccC
Confidence 468899965 89996 489999999998 46742 23 587888997 456789 799999888
Q ss_pred CCCCCCCCcccCCCC-CCCccC--CCCCCCCCcCcccccCCC--cceecCCCCccCCCc
Q psy9819 92 HCQYCRAGSYGNATT-QEGCRK--CDCNSHGNSVLGVCDSIT--GECICQDNTQGKNCE 145 (377)
Q Consensus 92 ~C~~C~~g~~g~~c~-~~~C~~--~~C~~~g~~~~g~C~~~~--g~C~C~~g~~G~~C~ 145 (377)
.++.=-....+..|. .++|.. .+|.+++ +|.... +.|.|++||+|....
T Consensus 80 ~~~~~~~~~~~~~C~dideC~~~~~~C~~~~-----~C~n~~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 80 SGAKTFKNESENTCQDVDECSSGQHQCDSST-----VCFNTVGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp TCCSCBSSGGGCCEEECCHHHHTCCCCCTTS-----EEEECSSCEEEECCSSSCBCTTC
T ss_pred cCccccccCCCCCcCCccCccCcCCCCCCCC-----EEECCCCCEEeeCCCCcccCCCC
Confidence 765211112233333 245653 4576655 775433 478888888887654
No 28
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.52 E-value=6.6e-08 Score=73.14 Aligned_cols=74 Identities=18% Similarity=0.309 Sum_probs=44.7
Q ss_pred CCCCCCCCcc-cccccCC-CCCCCCCCeecCCcccCCCCCCCCCCC-CCCCCCCccCCCceEEeCCCCCCCCCCCCCeec
Q psy9819 285 QGKPSEGFNA-TYQIFSC-PDKCPENRTCINNQCVCPPRRTGPDCQ-EEICPNECHEFLNHGTCDLLLTGVHITHGRTLH 361 (377)
Q Consensus 285 s~~c~~GF~g-~~~~~~C-~~~C~~~g~C~~g~C~C~~G~~G~~C~-~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~ 361 (377)
.+.|.+||.+ .+++++| ..+|.+... ..+|+|++||+ .|+ .++ +.|.. ..|.+|++|+
T Consensus 3 ~C~C~~g~~g~~c~~~~c~~~pC~n~~~--~y~C~C~~G~~--~C~~~~~--~~C~~-------------~pC~ngg~C~ 63 (91)
T 1tpg_A 3 QVICRDEKTQMIYQQHQSWLRPVLRSNR--VEYCWCNSGRA--QCHSVPV--KSCSE-------------PRCFNGGTCQ 63 (91)
T ss_dssp CCCCBCSSSCCBCCSSCEEEEECSSSSC--EEEEECSSSCC--BCCEECE--EECSS-------------CCSCTTCEEE
T ss_pred eeECCCCCcCCeECCCcccCCccccCCC--CcEeECCCCCc--ccccCcC--CcccC-------------CCCCCCCEee
Confidence 4556667766 4445555 233443310 11567777776 555 221 22221 2377999999
Q ss_pred ccc--cCeeeecCCCeeC
Q psy9819 362 YQV--DLIRCTCRQVYLI 377 (377)
Q Consensus 362 ~~~--~~~~c~~~~~~~~ 377 (377)
+.+ ++|+|.|++||++
T Consensus 64 ~~~~~~~~~C~C~~G~~G 81 (91)
T 1tpg_A 64 QALYFSDFVCQCPEGFAG 81 (91)
T ss_dssp EESSSSCEEEECCTTCBS
T ss_pred cCCCCCCeEeECCCCCcC
Confidence 998 9999999999974
No 29
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=98.51 E-value=5.9e-08 Score=81.35 Aligned_cols=105 Identities=26% Similarity=0.469 Sum_probs=72.4
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCCc----CCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcC---C
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVP----CNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHR---G 268 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~----C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~---~ 268 (377)
..+|.|.|.+ +.+.+|+|+|. .|+++ |..|++.||||.. +++.+|+...+. .
T Consensus 20 ~~~C~w~I~~-------~~g~~I~l~f~-~f~le~~~~C~~D~l~i~dg~~-------------~~~~~CG~~~~~~~~~ 78 (159)
T 1nzi_A 20 EVEKSWDIEV-------PEGYGIHLYFT-HLDIELSENCAYDSVQIISGDT-------------EEGRLCGQRSSNNPHS 78 (159)
T ss_dssp SEEEEEEEEC-------CTTEEEEEEEE-EEECCCCGGGCSSEEEEEC----------------CCEEECSEECCCCSSC
T ss_pred CCCEEEEEEe-------CCCCEEEEEEe-EEEecCCCCCCCCEEEEEeCCc-------------hhcccCCCCCCCcccC
Confidence 5679999999 55678999987 45544 8899999999743 447788765321 1
Q ss_pred C--cceecCCCeeEeccCCCCCC----CCCccccc---ccCCCC----CCCCCCeecCC----cccCCCCCC
Q psy9819 269 Y--EVLEAKSGVMTIHYKQGKPS----EGFNATYQ---IFSCPD----KCPENRTCINN----QCVCPPRRT 323 (377)
Q Consensus 269 p--~~c~~~sG~~~v~~~s~~c~----~GF~g~~~---~~~C~~----~C~~~g~C~~g----~C~C~~G~~ 323 (377)
| ..+.+.++.|.|.|.++... .||.+.+. +++|.. .|. ..|.+. .|.|++||+
T Consensus 79 P~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 79 PIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp CCSEEEEESSSEEEEEEEECSCCTTCCCEEEEEEEEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCE
T ss_pred CcceeEEecCCeEEEEEEecCccCcccccceeeeecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcE
Confidence 3 46889999999999998654 68988553 457743 243 356432 577777776
No 30
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.50 E-value=4.1e-09 Score=90.97 Aligned_cols=91 Identities=19% Similarity=0.363 Sum_probs=61.7
Q ss_pred CCCCCCccc----c-cccCCC-----CCCCCCCeecCC---------cccCCCCCCCCCC--CCCCCC-CC------cc-
Q psy9819 287 KPSEGFNAT----Y-QIFSCP-----DKCPENRTCINN---------QCVCPPRRTGPDC--QEEICP-NE------CH- 337 (377)
Q Consensus 287 ~c~~GF~g~----~-~~~~C~-----~~C~~~g~C~~g---------~C~C~~G~~G~~C--~~~~C~-~~------C~- 337 (377)
.|.+||.+. + ++++|. .+|.++++|++. +|.|++||+|..+ +++.|. ++ |.
T Consensus 28 ~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~ 107 (186)
T 1z1y_A 28 MCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIV 107 (186)
T ss_dssp EECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEE
T ss_pred ECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEee
Confidence 355666653 2 346774 348888888432 5889999988744 233332 22 33
Q ss_pred ---CC--CceEEeCCCCCC-----CC------------C-CCCCeecccccCeeeecCCCeeC
Q psy9819 338 ---EF--LNHGTCDLLLTG-----VH------------I-THGRTLHYQVDLIRCTCRQVYLI 377 (377)
Q Consensus 338 ---~~--~~~c~C~~g~~G-----~~------------C-~~g~~~~~~~~~~~c~~~~~~~~ 377 (377)
+. .++|.|++||+| .. | .++++|++..++|+|+|++||.+
T Consensus 108 ~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~C~C~~G~~g 170 (186)
T 1z1y_A 108 EYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTF 170 (186)
T ss_dssp EEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEETTEEEEEECTTCEE
T ss_pred CCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccccccccCcceecCCCCeeeECCCCCcc
Confidence 22 357888888887 33 4 56889999999999999999963
No 31
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.48 E-value=4.2e-08 Score=74.26 Aligned_cols=78 Identities=21% Similarity=0.458 Sum_probs=53.3
Q ss_pred CeeeecCCCCccCCCCCC-C---CCCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccCCCCCCCCCcCc
Q psy9819 48 DYSCQCELGWTGVDCSVN-C---LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVL 123 (377)
Q Consensus 48 ~~~C~C~~G~~G~~C~~~-C---~C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~~~C~~~g~~~~ 123 (377)
+|+|.|++||+|..|++. | +|.+. ...+.| .|++||+ +|+. -..++|.+.+|.++|
T Consensus 1 sy~C~C~~g~~g~~c~~~~c~~~pC~n~----~~~y~C-~C~~G~~--~C~~---------~~~~~C~~~pC~ngg---- 60 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQHQSWLRPVLRS----NRVEYC-WCNSGRA--QCHS---------VPVKSCSEPRCFNGG---- 60 (91)
T ss_dssp CCCCCCBCSSSCCBCCSSCEEEEECSSS----SCEEEE-ECSSSCC--BCCE---------ECEEECSSCCSCTTC----
T ss_pred CeeeECCCCCcCCeECCCcccCCccccC----CCCcEe-ECCCCCc--cccc---------CcCCcccCCCCCCCC----
Confidence 589999999999999752 2 23222 234667 5777765 4430 012567777888877
Q ss_pred ccccC----CCcceecCCCCccCCCcc
Q psy9819 124 GVCDS----ITGECICQDNTQGKNCER 146 (377)
Q Consensus 124 g~C~~----~~g~C~C~~g~~G~~C~~ 146 (377)
+|.. ....|.|++||+|.+|++
T Consensus 61 -~C~~~~~~~~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 61 -TCQQALYFSDFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp -EEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred -EeecCCCCCCeEeECCCCCcCCcCCc
Confidence 7753 245899999999999973
No 32
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.44 E-value=2.1e-08 Score=79.86 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=27.2
Q ss_pred ceEEeCCCCC---CCCCC------C----CCeecccccCeeeecCCCeeC
Q psy9819 341 NHGTCDLLLT---GVHIT------H----GRTLHYQVDLIRCTCRQVYLI 377 (377)
Q Consensus 341 ~~c~C~~g~~---G~~C~------~----g~~~~~~~~~~~c~~~~~~~~ 377 (377)
++|.|++||+ |..|+ . +++|++.+++|+|+|++||++
T Consensus 61 y~C~C~~Gy~~~~g~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~g 110 (118)
T 1dx5_I 61 ASCECPEGYILDDGFICTDIDECENGGFCSGVCHNLPGTFECICGPDSAL 110 (118)
T ss_dssp TCEECCTTEEEETTTEEEECCHHHHCSSCSSEEEECSSSEEEEECSSSSC
T ss_pred eEeECCCCccCCCCCccccccccCCCCCCcCeEEeCCCCEEEECCCCCcc
Confidence 4556666665 44442 0 689999999999999999974
No 33
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=98.42 E-value=9.4e-08 Score=90.76 Aligned_cols=66 Identities=35% Similarity=0.776 Sum_probs=50.8
Q ss_pred CCeeeecCCCCccCCCCC----------------------CCCCCCCc-eee---------cCCCcccCCCCCCCCCCCC
Q psy9819 47 PDYSCQCELGWTGVDCSV----------------------NCLCNNHS-TCV---------HGIGICDECHDWTTGDHCQ 94 (377)
Q Consensus 47 ~~~~C~C~~G~~G~~C~~----------------------~C~C~~~g-~C~---------~~~~~C~~C~~g~~G~~C~ 94 (377)
..+.|.|.++|+|.+|++ +|.|+.++ .|. ..+|+|..|+++|+|.+||
T Consensus 270 ~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~Ce 349 (375)
T 4aqt_A 270 DKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCE 349 (375)
T ss_dssp SCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTTEESTTSC
T ss_pred CCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCCCCCCCCCcCCCCC
Confidence 467899999999999983 24566665 343 4578996699999999999
Q ss_pred CCCCCcccCCCCCCCccCC
Q psy9819 95 YCRAGSYGNATTQEGCRKC 113 (377)
Q Consensus 95 ~C~~g~~g~~c~~~~C~~~ 113 (377)
.|++||+|.... ..|.+|
T Consensus 350 ~C~~Gyyg~~~~-~~C~pC 367 (375)
T 4aqt_A 350 RCRENFFRLGNT-EACSPA 367 (375)
T ss_dssp EECSSEECCTTC-SSCEEC
T ss_pred CCCcCcccCcCC-CCCcCC
Confidence 999999998643 356544
No 34
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.41 E-value=1e-07 Score=83.77 Aligned_cols=24 Identities=21% Similarity=0.530 Sum_probs=12.2
Q ss_pred CCCCCeecCCcccCCCCCCCCCCC
Q psy9819 305 CPENRTCINNQCVCPPRRTGPDCQ 328 (377)
Q Consensus 305 C~~~g~C~~g~C~C~~G~~G~~C~ 328 (377)
|+++|+|+.++|.|++||+|.+||
T Consensus 98 Csg~G~C~~g~C~C~~G~~G~~Ce 121 (217)
T 2p28_B 98 CHGKGFLECGICRCDTGYIGKNCE 121 (217)
T ss_dssp TTTSEEEETTEEEECTTEESTTSC
T ss_pred cCCCceEECCEEECCCCccCCccc
Confidence 445555544555555555555554
No 35
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.40 E-value=6.2e-08 Score=95.28 Aligned_cols=88 Identities=24% Similarity=0.534 Sum_probs=38.7
Q ss_pred eEEEecCCCCCcccccccceeeeEeeecCCCcCCCCCCCeecCCCCeeeecCCCCccCCCCC-CC--CCCCCceeecCCC
Q psy9819 3 IIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSV-NC--LCNNHSTCVHGIG 79 (377)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~C~~G~C~~~~~~~C~C~~G~~G~~C~~-~C--~C~~~g~C~~~~~ 79 (377)
.|||+..|.... .|-.=.............|..+|+||+|+.+ ++|.|++||+|..|++ .| +|.++|+|+.. +
T Consensus 365 ~I~Ri~~p~~~~-~p~~C~~~~~g~~c~~~~C~~~C~nG~C~~~--~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~-~ 440 (463)
T 2wg3_C 365 KLYKIVDPKRPL-MPEECRATVQPAQTLTSECSRLCRNGYCTPT--GKCCCSPGWEGDFCRTAKCEPACRHGGVCVRP-N 440 (463)
T ss_dssp EEEEEECTTSCS-SCGGGCCCCCCCCCCCCHHHHHCCSEEECTT--SCEEECTTEESTTSCEECC---------------
T ss_pred cEEEecCccccc-ccccCCCCCcCCCCccccccCCCCCCccCCC--CeECCCCCcCCCcCCcCcCCCCCCCCCEECCC-C
Confidence 588988655432 1110000011112334667778999999964 4899999999999985 46 79999999853 6
Q ss_pred cccCCCCCCCCCCCCC
Q psy9819 80 ICDECHDWTTGDHCQY 95 (377)
Q Consensus 80 ~C~~C~~g~~G~~C~~ 95 (377)
+| .|+++|+|.+|+.
T Consensus 441 ~C-~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 441 KC-LCKKGYLGPQCEQ 455 (463)
T ss_dssp ----------------
T ss_pred EE-ECCCCcccCCCCC
Confidence 89 7888888888863
No 36
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.32 E-value=1.7e-07 Score=89.71 Aligned_cols=83 Identities=33% Similarity=0.671 Sum_probs=40.4
Q ss_pred CCCCCCCc-eeecC--CCcccCCCCCCCCCCCCCCCCCcccCCCC-----------CCCccCCCCCCCCCcCcccccCCC
Q psy9819 65 NCLCNNHS-TCVHG--IGICDECHDWTTGDHCQYCRAGSYGNATT-----------QEGCRKCDCNSHGNSVLGVCDSIT 130 (377)
Q Consensus 65 ~C~C~~~g-~C~~~--~~~C~~C~~g~~G~~C~~C~~g~~g~~c~-----------~~~C~~~~C~~~g~~~~g~C~~~~ 130 (377)
.|.|++|+ .|... +++| .|+++|+|.+||.|.++|++..+. ...|.+|+|..++. .|+..+
T Consensus 296 ~C~CnGHas~C~~~~g~~~C-~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~----~CD~~t 370 (426)
T 3zyj_B 296 RCKCNLHATVCVYDNSKLTC-ECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTN----VCDNEL 370 (426)
T ss_dssp EECCSSSCSCEEEETTEEEE-CCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------
T ss_pred cCcCCCchhhcCCCCCCcee-eCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcC----ccccCc
Confidence 47899986 79854 4689 799999999999999999876543 15688888877653 566555
Q ss_pred ccee----cCCCCccCCCccCCCCccCCCC
Q psy9819 131 GECI----CQDNTQGKNCERCLPGYYGDPT 156 (377)
Q Consensus 131 g~C~----C~~g~~G~~C~~C~~G~~g~~~ 156 (377)
+.|. |..+. .| .|++||+|..+
T Consensus 371 ~~C~ngg~C~~~~---~C-~C~~G~~G~~C 396 (426)
T 3zyj_B 371 LHCQNGGTCHNNV---RC-LCPAAYTGILC 396 (426)
T ss_dssp ------------------------------
T ss_pred ccCCCCCCcCCCC---CC-cCCCCCcCCCC
Confidence 5554 55544 66 57777777643
No 37
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.31 E-value=1.3e-07 Score=75.10 Aligned_cols=94 Identities=30% Similarity=0.724 Sum_probs=53.9
Q ss_pred CCCcC-CCCCCCeecCC--CCeeeecCCCCccCCCCC-CC--CCCCC---ceee-cCCCcccCCCCCCCCCCCCCCCCCc
Q psy9819 31 ASLCY-NKCIYGYCKGP--PDYSCQCELGWTGVDCSV-NC--LCNNH---STCV-HGIGICDECHDWTTGDHCQYCRAGS 100 (377)
Q Consensus 31 ~~~C~-~~C~~G~C~~~--~~~~C~C~~G~~G~~C~~-~C--~C~~~---g~C~-~~~~~C~~C~~g~~G~~C~~C~~g~ 100 (377)
+..|. +||+| +|++. ++|+|.|++||+|..+++ .| .|.++ ++|. ...+.| .|++||++..
T Consensus 4 ideC~~~pC~~-~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~~~~y~C-~C~~Gy~~~~-------- 73 (118)
T 1dx5_I 4 VDPCFRANCEY-QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQASC-ECPEGYILDD-------- 73 (118)
T ss_dssp CCGGGGCCCSS-EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEECEECTTSTTCE-ECCTTEEEET--------
T ss_pred cccCCCCCCCC-CCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCCCcccCCCCeEe-ECCCCccCCC--------
Confidence 34454 58987 99875 589999999999985432 12 24333 3454 234556 4555554100
Q ss_pred ccCCCC-CCCccC-CCCCCCCCcCcccccCC--CcceecCCCCccC
Q psy9819 101 YGNATT-QEGCRK-CDCNSHGNSVLGVCDSI--TGECICQDNTQGK 142 (377)
Q Consensus 101 ~g~~c~-~~~C~~-~~C~~~g~~~~g~C~~~--~g~C~C~~g~~G~ 142 (377)
|..|. .++|.. .+| ++ +|... .+.|.|++||+|.
T Consensus 74 -g~~C~dideC~~~~~C--~~-----~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 74 -GFICTDIDECENGGFC--SG-----VCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp -TTEEEECCHHHHCSSC--SS-----EEEECSSSEEEEECSSSSCE
T ss_pred -CCccccccccCCCCCC--cC-----eEEeCCCCEEEECCCCCccC
Confidence 33332 245554 445 22 66543 3588888888763
No 38
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=98.31 E-value=5.3e-07 Score=86.03 Aligned_cols=58 Identities=31% Similarity=0.830 Sum_probs=47.0
Q ss_pred eeeecCCCCccCCCCC----------------------CCCCCCCce-ee------------------cCCCcccCCCCC
Q psy9819 49 YSCQCELGWTGVDCSV----------------------NCLCNNHST-CV------------------HGIGICDECHDW 87 (377)
Q Consensus 49 ~~C~C~~G~~G~~C~~----------------------~C~C~~~g~-C~------------------~~~~~C~~C~~g 87 (377)
.+|.|..+++|..|+. +|.|++|+. |. ..+++|+.|.++
T Consensus 286 g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~n 365 (403)
T 2y38_A 286 LQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHH 365 (403)
T ss_dssp EEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSS
T ss_pred eEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCc
Confidence 4688888888887772 468888874 83 347899669999
Q ss_pred CCCCCCCCCCCCcccCCCC
Q psy9819 88 TTGDHCQYCRAGSYGNATT 106 (377)
Q Consensus 88 ~~G~~C~~C~~g~~g~~c~ 106 (377)
++|.+||.|++||+|....
T Consensus 366 t~G~~CErC~~GYyg~p~~ 384 (403)
T 2y38_A 366 TTGINCERCLPGFFRAPDQ 384 (403)
T ss_dssp EESTTSCEECTTCEECTTS
T ss_pred CcCCCCCcCCCCccCCCCC
Confidence 9999999999999998654
No 39
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.31 E-value=3.1e-07 Score=72.49 Aligned_cols=64 Identities=30% Similarity=0.529 Sum_probs=45.5
Q ss_pred CCCCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCeeeecCCCe
Q psy9819 300 SCPDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVY 375 (377)
Q Consensus 300 ~C~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~c~~~~~~ 375 (377)
+|...|.++|+|++. +|.|++||+|..|+..+-.+.|.... ..|.+ +|++.+++|+|+|++||
T Consensus 17 ~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~-----------~~C~~--~C~n~~g~y~C~C~~G~ 83 (114)
T 1aut_L 17 PCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDN-----------GGCTH--YCLEEVGWRRCSCAPGY 83 (114)
T ss_dssp SSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGG-----------GGCSS--EEEECSSSEEEECCTTE
T ss_pred cccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCC-----------CCCCC--EeECCCCCEEeECCCCe
Confidence 344559999999765 79999999999998653223343211 12333 78888888888888888
Q ss_pred e
Q psy9819 376 L 376 (377)
Q Consensus 376 ~ 376 (377)
+
T Consensus 84 ~ 84 (114)
T 1aut_L 84 K 84 (114)
T ss_dssp E
T ss_pred e
Confidence 6
No 40
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.25 E-value=6.3e-07 Score=66.28 Aligned_cols=64 Identities=30% Similarity=0.699 Sum_probs=47.9
Q ss_pred cccCCC--CCCCCCCeecCC----cccCCCCCC--CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCee
Q psy9819 297 QIFSCP--DKCPENRTCINN----QCVCPPRRT--GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIR 368 (377)
Q Consensus 297 ~~~~C~--~~C~~~g~C~~g----~C~C~~G~~--G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~ 368 (377)
++++|. ++|.+ |+|++. +|.|++||+ |..|+.. +.|.. ...|.+| +|++..++|+
T Consensus 4 dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~di---deC~~------------~~~C~~~-~C~n~~g~y~ 66 (82)
T 1emn_A 4 DMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECVDT---DECSV------------GNPCGNG-TCKNVIGGFE 66 (82)
T ss_dssp CCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEEEC---CGGGT------------CCTTSSS-CEEECSSSEE
T ss_pred ccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccCCc---ccccC------------CCCCCCC-EeECCCCCEE
Confidence 356673 56875 899764 799999997 8888532 34431 2357775 9999999999
Q ss_pred eecCCCeeC
Q psy9819 369 CTCRQVYLI 377 (377)
Q Consensus 369 c~~~~~~~~ 377 (377)
|+|++||++
T Consensus 67 C~C~~G~~g 75 (82)
T 1emn_A 67 CTCEEGFEP 75 (82)
T ss_dssp ECCSSSSCC
T ss_pred eECCCCeEe
Confidence 999999974
No 41
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.23 E-value=9.9e-08 Score=80.30 Aligned_cols=105 Identities=26% Similarity=0.634 Sum_probs=66.0
Q ss_pred CCCcC--CCCCCCeecC-CCCeeeecCCCCc----cCCCCCC----C-----CC--CCCceeecC------CCcccCCCC
Q psy9819 31 ASLCY--NKCIYGYCKG-PPDYSCQCELGWT----GVDCSVN----C-----LC--NNHSTCVHG------IGICDECHD 86 (377)
Q Consensus 31 ~~~C~--~~C~~G~C~~-~~~~~C~C~~G~~----G~~C~~~----C-----~C--~~~g~C~~~------~~~C~~C~~ 86 (377)
+..|. +||.+|+|++ +++|+|.|++||+ |..|+.. | +| .++++|+.. .+.| .|++
T Consensus 3 ideC~~~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C-~C~~ 81 (162)
T 1uzk_A 3 VNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASC-CCSL 81 (162)
T ss_dssp CCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHH-HTTT
T ss_pred cccCCCCCCCCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCcee-eCCC
Confidence 44553 6898899986 4589999999999 7888631 3 12 346678632 5789 7999
Q ss_pred CCC-CCCCCCC------------CC--CcccCCC-----CCCCccC--CCCCCCCCcCcccccCC--CcceecCCCCccC
Q psy9819 87 WTT-GDHCQYC------------RA--GSYGNAT-----TQEGCRK--CDCNSHGNSVLGVCDSI--TGECICQDNTQGK 142 (377)
Q Consensus 87 g~~-G~~C~~C------------~~--g~~g~~c-----~~~~C~~--~~C~~~g~~~~g~C~~~--~g~C~C~~g~~G~ 142 (377)
||. |..|+.| ++ ||.+... +.++|.. .+|.+ + +|... .++|.|++||+|.
T Consensus 82 G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g-----~C~n~~gsy~C~C~~Gy~g~ 155 (162)
T 1uzk_A 82 GKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-G-----KCINTFGSFQCRCPTGYYLN 155 (162)
T ss_dssp CCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-S-----EEEECSSCEEEECCTTCCBC
T ss_pred CCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-C-----EeEcCCCCEEeeCCCCccCC
Confidence 998 7778754 44 8888632 1255653 23542 3 56433 3477777777764
No 42
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.19 E-value=7.5e-07 Score=89.90 Aligned_cols=108 Identities=27% Similarity=0.614 Sum_probs=71.0
Q ss_pred CCcC-CCCCC-CeecCCC--Ceee-ecCCCCcc--CCCCC--CC---C--CCCCc---eee--cCCCcccC-CCCCCCCC
Q psy9819 32 SLCY-NKCIY-GYCKGPP--DYSC-QCELGWTG--VDCSV--NC---L--CNNHS---TCV--HGIGICDE-CHDWTTGD 91 (377)
Q Consensus 32 ~~C~-~~C~~-G~C~~~~--~~~C-~C~~G~~G--~~C~~--~C---~--C~~~g---~C~--~~~~~C~~-C~~g~~G~ 91 (377)
..|. +||.+ ++|++.. +|+| .|++||+| ..|+. +| + |.+++ +|. ..+++| . |++||+|.
T Consensus 4 DeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C-~~C~~Gy~G~ 82 (634)
T 1yo8_A 4 DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHC-LPCPPRYRGN 82 (634)
T ss_dssp CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEE-CCCCTTEEEC
T ss_pred cccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceec-ccCCCCcccC
Confidence 3454 68987 7898754 5999 99999998 78874 45 3 88877 887 456788 6 88888887
Q ss_pred CCCCCC---CCcccCCCC-CCCccC--CCCCCCCCcCcccccCC------CcceecCCCCcc--CCCc
Q psy9819 92 HCQYCR---AGSYGNATT-QEGCRK--CDCNSHGNSVLGVCDSI------TGECICQDNTQG--KNCE 145 (377)
Q Consensus 92 ~C~~C~---~g~~g~~c~-~~~C~~--~~C~~~g~~~~g~C~~~------~g~C~C~~g~~G--~~C~ 145 (377)
.|+.=. ...-+..|. .++|.. .+|.+++ +|... .++|.|++||.| ..|+
T Consensus 83 ~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~-----~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 83 QPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHA-----ECIYLGHFSDPMYKCECQTGYAGDGLICG 145 (634)
T ss_dssp CCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTE-----EEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred ccccccccccccCCCcccccccccCCCcccccCc-----cccccccccccceeeeccCCccccCcccc
Confidence 764100 000111222 245553 3566655 77543 358999999998 6786
No 43
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.18 E-value=1.5e-07 Score=92.63 Aligned_cols=70 Identities=19% Similarity=0.417 Sum_probs=38.4
Q ss_pred CCCCCCCcc-cccccCCCCCCCCCCeecC-CcccCCCCCCCCCCCCCCCCCCccCC-----CceEEeCCCCCCCCCCC
Q psy9819 286 GKPSEGFNA-TYQIFSCPDKCPENRTCIN-NQCVCPPRRTGPDCQEEICPNECHEF-----LNHGTCDLLLTGVHITH 356 (377)
Q Consensus 286 ~~c~~GF~g-~~~~~~C~~~C~~~g~C~~-g~C~C~~G~~G~~C~~~~C~~~C~~~-----~~~c~C~~g~~G~~C~~ 356 (377)
..|..||.+ .+..+.|..+|.| |+|++ ++|.|++||+|.+|++..|..+|.++ .++|.|.+||+|.+|+.
T Consensus 379 ~~C~~~~~g~~c~~~~C~~~C~n-G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 379 EECRATVQPAQTLTSECSRLCRN-GYCTPTGKCCCSPGWEGDFCRTAKCEPACRHGGVCVRPNKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp GGGCCCCCCCCCCCCHHHHHCCS-EEECTTSCEEECTTEESTTSCEECC-----------------------------
T ss_pred ccCCCCCcCCCCccccccCCCCC-CccCCCCeECCCCCcCCCcCCcCcCCCCCCCCCEECCCCEEECCCCcccCCCCC
Confidence 356678888 6777788767997 89976 69999999999999988887788765 27888999999999984
No 44
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.17 E-value=6.9e-07 Score=73.73 Aligned_cols=64 Identities=19% Similarity=0.457 Sum_probs=43.5
Q ss_pred cccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCee-cccccCeeee
Q psy9819 297 QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTL-HYQVDLIRCT 370 (377)
Q Consensus 297 ~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~-~~~~~~~~c~ 370 (377)
++++| +++|.++|+|++. +|.|++||+|..|+.. +.|.... ..|.+ +| ++.+++|+|.
T Consensus 47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~---deC~~~~-----------~~C~~--~C~~n~~g~y~C~ 110 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD---ATCNIKN-----------GRCKQ--FCKTGADSKVLCS 110 (146)
T ss_dssp ---CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEE---CCTTSGG-----------GSCSS--BCCCCSSSCCCCB
T ss_pred CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCC---ccccCCC-----------CCCcC--CCCCCCCCCEEeE
Confidence 56778 5679999999654 7999999999999864 3343211 12444 67 6777777777
Q ss_pred cCCCee
Q psy9819 371 CRQVYL 376 (377)
Q Consensus 371 ~~~~~~ 376 (377)
|++||+
T Consensus 111 C~~Gy~ 116 (146)
T 1x7a_L 111 CTTGYR 116 (146)
T ss_dssp CCTTEE
T ss_pred cCCCcE
Confidence 777775
No 45
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1
Probab=98.14 E-value=8.7e-07 Score=69.85 Aligned_cols=82 Identities=24% Similarity=0.501 Sum_probs=67.3
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcceecC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAK 275 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c~~~ 275 (377)
..+|.|.|.+ +++.+|.|+|. .++++|..|++.||||.. .+++++.+|+.. |..+.+.
T Consensus 28 ~~~C~w~I~~-------~~g~~I~l~f~-~f~l~C~~D~l~i~dg~~----------~~~~~~~~CG~~----p~~~~S~ 85 (114)
T 1sfp_A 28 KTNCVWTIQM-------PPEYHVRVSIQ-YLQLNCNKESLEIIDGLP----------GSPVLGKICEGS----LMDYRSS 85 (114)
T ss_dssp CSEEEEEEEC-------CTTCEEEEEEE-EEECCTTTEEEEEESSST----------TSCEEEEESEEE----EEEEECS
T ss_pred CCCEEEEEEe-------CCCCEEEEEEe-eeeeecCCCEEEEEcCCC----------CCcceeEecCcC----CCCEEec
Confidence 5679999999 56779999998 788899999999999864 145778899764 5678889
Q ss_pred CCeeEeccCCCCCC--CCCccccccc
Q psy9819 276 SGVMTIHYKQGKPS--EGFNATYQIF 299 (377)
Q Consensus 276 sG~~~v~~~s~~c~--~GF~g~~~~~ 299 (377)
++.+.|.|.++... .||.+.|...
T Consensus 86 ~n~l~v~F~Sd~~~~~~GF~~~y~~~ 111 (114)
T 1sfp_A 86 GSIMTVKYIREPEHPASFYEVLYFQD 111 (114)
T ss_dssp SSEEEEEEEECTTSCCCCCEEEEEEE
T ss_pred CCeEEEEEEECCCCCCCCEEEEEEEE
Confidence 99999999988654 8999877543
No 46
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=98.14 E-value=7.5e-07 Score=69.65 Aligned_cols=80 Identities=25% Similarity=0.542 Sum_probs=65.7
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcceecC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAK 275 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c~~~ 275 (377)
..+|.|.|.+ +++.+|.|+|. .++++|..|++.||||... +++++.+|+.. |..+.+
T Consensus 24 ~~~C~w~I~~-------~~g~~I~l~f~-~f~l~C~~D~l~I~dg~~~----------~~~~~~~CG~~----p~~~~S- 80 (109)
T 1spp_A 24 KTECVWTLQV-------DPKYKLLVSIP-TLNLTCGKEYVEVLEGAPG----------SKSLGKFCEGL----SILNRG- 80 (109)
T ss_dssp CSEEEEEEEC-------CTTSEEEEEEE-EEECCTTTEEEEEESSSTT----------SCEEEEESEEE----EEEEEE-
T ss_pred CCcEEEEEEc-------CCCCEEEEEEe-eeeccCCCCEEEEEeCCCC----------CchhhhhhCCC----CCCEEE-
Confidence 5679999999 56779999998 8888999999999998641 35778899764 567888
Q ss_pred CCeeEeccCCCCCC--CCCcccccc
Q psy9819 276 SGVMTIHYKQGKPS--EGFNATYQI 298 (377)
Q Consensus 276 sG~~~v~~~s~~c~--~GF~g~~~~ 298 (377)
++.+.|.|.++... .||.+.|..
T Consensus 81 ~n~l~v~F~Sd~~~~~~GF~~~y~~ 105 (109)
T 1spp_A 81 SSGMTVKYKRDSGHPASPYEIIFLR 105 (109)
T ss_dssp CTTCEEEEEECTTCCCCCCEEEEEE
T ss_pred CCEEEEEEEeCCCCCCCCEEEEEEE
Confidence 89999999988654 999987654
No 47
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.13 E-value=2.6e-07 Score=76.37 Aligned_cols=79 Identities=19% Similarity=0.373 Sum_probs=52.6
Q ss_pred cccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCC----------------CCC---CCc------cCC-------
Q psy9819 297 QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEE----------------ICP---NEC------HEF------- 339 (377)
Q Consensus 297 ~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~----------------~C~---~~C------~~~------- 339 (377)
++++| .++|.+ |+|++. +|.|++||+|..+... .|. +.| .+.
T Consensus 3 dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~ 81 (147)
T 2w86_A 3 DIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGS 81 (147)
T ss_dssp CCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETT
T ss_pred cCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCC
Confidence 45667 356875 699654 7999999987644210 010 111 111
Q ss_pred -----CceEEeCCCCC---CCC-------------CCCCCeecccccCeeeecCCCeeC
Q psy9819 340 -----LNHGTCDLLLT---GVH-------------ITHGRTLHYQVDLIRCTCRQVYLI 377 (377)
Q Consensus 340 -----~~~c~C~~g~~---G~~-------------C~~g~~~~~~~~~~~c~~~~~~~~ 377 (377)
.+.|+|.+||+ |.. |.+| +|++.+++|+|+|++||++
T Consensus 82 ~C~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g-~C~n~~g~y~C~C~~Gy~g 139 (147)
T 2w86_A 82 PCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNG-LCVNTRGSFKCQCPSGMTL 139 (147)
T ss_dssp TTEECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSSSS-EEEEETTEEEEECCTTCCB
T ss_pred CcccCCCcccCCCccccCCCCccCccccccCCCCCCCCC-EEECCCCCEEeeCCCCCcc
Confidence 14568999994 764 4455 9999999999999999973
No 48
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}
Probab=98.12 E-value=3.2e-06 Score=69.93 Aligned_cols=85 Identities=24% Similarity=0.468 Sum_probs=67.0
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcc
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEV 271 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~ 271 (377)
..+|.|.|.+ +.+.+|+|+|. .|++ .|..|++.||||.... +++++.+|+.. .|..
T Consensus 30 n~~C~W~I~~-------~~g~~I~L~F~-~f~le~~~~C~~D~l~I~dg~~~~---------~~~~~~~CG~~---~p~~ 89 (149)
T 2wno_A 30 NQICYWHIRL-------KYGQRIHLSFL-DFDLEDDPGCLADYVEIYDSYDDV---------HGFVGRYCGDE---LPDD 89 (149)
T ss_dssp TCEEEEEEEC-------CTTCEEEEEEE-EEECCCCTTCCSSEEEEESSSSSS---------SSEEEEECSSS---CCCC
T ss_pred CCEEEEEEEE-------CCCCEEEEEEE-EEEecCCCCCCCCEEEEecCCCCC---------cceeeeEcCCC---CCCC
Confidence 5679999999 55678999987 5554 4889999999986522 46778999875 3567
Q ss_pred eecCCCeeEeccCCCCCC--CCCcccccccC
Q psy9819 272 LEAKSGVMTIHYKQGKPS--EGFNATYQIFS 300 (377)
Q Consensus 272 c~~~sG~~~v~~~s~~c~--~GF~g~~~~~~ 300 (377)
+.+.++.|.|.|.++... .||.+.|....
T Consensus 90 ~~S~~n~l~v~F~Sd~~~~~~GF~a~y~~~~ 120 (149)
T 2wno_A 90 IISTGNVMTLKFLSDASVTAGGFQIKYVAMD 120 (149)
T ss_dssp EECSSSEEEEEEECCSSCCCCEEEEEEEEEC
T ss_pred EEEeCCEEEEEEEECCCCCCCCEEEEEEEEC
Confidence 899999999999998754 89999776543
No 49
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.08 E-value=1.6e-06 Score=87.50 Aligned_cols=87 Identities=21% Similarity=0.433 Sum_probs=51.9
Q ss_pred CC-CCCCCCcc---cc-cccCCC-CC--CCCCC---eecCC----ccc-CCCCCCCCCCCCCC---C---CCCccCCCce
Q psy9819 285 QG-KPSEGFNA---TY-QIFSCP-DK--CPENR---TCINN----QCV-CPPRRTGPDCQEEI---C---PNECHEFLNH 342 (377)
Q Consensus 285 s~-~c~~GF~g---~~-~~~~C~-~~--C~~~g---~C~~g----~C~-C~~G~~G~~C~~~~---C---~~~C~~~~~~ 342 (377)
.+ .|..||.+ .+ .+++|. .+ |.+++ +|++. +|. |++||+|..|+... + ...|...
T Consensus 26 ~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~di--- 102 (634)
T 1yo8_A 26 SCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPE--- 102 (634)
T ss_dssp EECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEEC---
T ss_pred ECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCccccc---
Confidence 45 67777776 23 245663 33 77777 77543 577 77777777765100 0 0011100
Q ss_pred EEeCCCCCCCCCCCCCeecccc----cCeeeecCCCee
Q psy9819 343 GTCDLLLTGVHITHGRTLHYQV----DLIRCTCRQVYL 376 (377)
Q Consensus 343 c~C~~g~~G~~C~~g~~~~~~~----~~~~c~~~~~~~ 376 (377)
=.|..+ -..|.++++|++.. ++|+|+|++||.
T Consensus 103 deC~~~--~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~ 138 (634)
T 1yo8_A 103 NPCKDK--THNCHKHAECIYLGHFSDPMYKCECQTGYA 138 (634)
T ss_dssp CTTTTT--CCCCCTTEEEEECCTTCSSSEEEEECTTEE
T ss_pred ccccCC--CcccccCccccccccccccceeeeccCCcc
Confidence 012211 13577889999998 999999999996
No 50
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=98.07 E-value=1.3e-06 Score=68.99 Aligned_cols=81 Identities=22% Similarity=0.441 Sum_probs=66.8
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcceecC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAK 275 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c~~~ 275 (377)
..+|.|.|.+ +++.+|.|+|. .++++|..|++.||||... +++++.+|+.. |..+.+.
T Consensus 27 ~~~C~w~I~~-------~~g~~I~l~f~-~f~l~C~~D~l~i~dg~~~----------~~~~~~~CG~~----p~~~~S~ 84 (116)
T 1spp_B 27 KNLCTWTILM-------KPDQKVRMAIP-YLNLACGKEYVEVFDGLLS----------GPSYGKLCAGA----AIVFLST 84 (116)
T ss_dssp CSEEEEEEEC-------CTTCEEEEEEE-EEECCBTTEEEEEESSSTT----------SCEEEEESEEE----EEEEECS
T ss_pred CCCEEEEEEe-------CCCCEEEEEEe-eCcccCCCCEEEEEcCCCC----------CcccccccCcC----CCCEEec
Confidence 5679999999 56779999998 8888999999999998641 45778899764 5678899
Q ss_pred CCeeEeccCCCCCC--CCCcccccc
Q psy9819 276 SGVMTIHYKQGKPS--EGFNATYQI 298 (377)
Q Consensus 276 sG~~~v~~~s~~c~--~GF~g~~~~ 298 (377)
++.|.|.|.++... .||.+.+..
T Consensus 85 ~n~l~v~F~Sd~~~~~~GF~~~y~~ 109 (116)
T 1spp_B 85 ANTMTIKYNRISGNSSSPFLIYFYG 109 (116)
T ss_dssp SSEEEEEEEESSCSCCCCCEEEEEE
T ss_pred CCEEEEEEEECCCCCCCCEEEEEEE
Confidence 99999999988654 899987654
No 51
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.07 E-value=1.6e-07 Score=77.63 Aligned_cols=34 Identities=29% Similarity=0.621 Sum_probs=27.1
Q ss_pred CCCcC-CCCCCCeecC-CCCeeeecCCCCccCCCCC
Q psy9819 31 ASLCY-NKCIYGYCKG-PPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 31 ~~~C~-~~C~~G~C~~-~~~~~C~C~~G~~G~~C~~ 64 (377)
+..|. +||+||+|++ +++|+|.|++||+|..+..
T Consensus 4 ideC~~~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~ 39 (147)
T 2w86_A 4 IDECESSPCINGVCKNSPGSFICECSSESTLDPTKT 39 (147)
T ss_dssp CCGGGGCCSBTSEEEEETTEEEEECCTTEEECTTSS
T ss_pred CccCcCCCCCCCEeECCCCCEEeECCCCcccCCCCC
Confidence 44554 6899999986 4589999999999987654
No 52
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.04 E-value=1.1e-06 Score=75.74 Aligned_cols=73 Identities=18% Similarity=0.383 Sum_probs=16.6
Q ss_pred CCCccc-ccccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeeccc
Q psy9819 290 EGFNAT-YQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQ 363 (377)
Q Consensus 290 ~GF~g~-~~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~ 363 (377)
.+|+.. .++++| .++|.++|+|++. .|.|++||+|..|+..+ .+.|.... ..|.+ +|++.
T Consensus 33 ~~fw~~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i-~deC~~~~-----------~~C~~--~C~n~ 98 (195)
T 1nfu_B 33 NEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFT-RKLCSLDN-----------GDCDQ--FCHEE 98 (195)
T ss_dssp -------------------------------------------------CCGGGTGG-----------GGCSS--EEEEE
T ss_pred ccccccCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccc-cccccCCC-----------CCCCC--EeECC
Confidence 456653 356788 5679999999764 79999999999998642 02233210 12344 67777
Q ss_pred ccCeeeecCCCee
Q psy9819 364 VDLIRCTCRQVYL 376 (377)
Q Consensus 364 ~~~~~c~~~~~~~ 376 (377)
.++|+|.|++||+
T Consensus 99 ~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 99 QNSVVCSCARGYT 111 (195)
T ss_dssp TTEEEEECCTTEE
T ss_pred CCCeEEECCCCce
Confidence 7777777777775
No 53
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.99 E-value=9.5e-06 Score=75.64 Aligned_cols=66 Identities=27% Similarity=0.575 Sum_probs=47.9
Q ss_pred cccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCeeeec
Q psy9819 297 QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTC 371 (377)
Q Consensus 297 ~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~c~~ 371 (377)
++++| .++|.++|+|++. +|.|++||+|..|+.++ +.|... .-..|.+ +|++..++|+|+|
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~--~eC~~~----------~~~~C~~--~C~~~~g~~~C~C 69 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAK--NECHPE----------RTDGCQH--FCLPGQESYTCSC 69 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCS--SSCCTT----------CTTSCSS--EEECCSSSCEEEC
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCc--ccCCCC----------CCCCCcC--ccccCCCeeEEec
Confidence 35677 4669999999764 79999999999998543 444331 0134666 8888888888888
Q ss_pred CCCee
Q psy9819 372 RQVYL 376 (377)
Q Consensus 372 ~~~~~ 376 (377)
+.||.
T Consensus 70 ~~g~~ 74 (317)
T 3h5c_B 70 AQGYR 74 (317)
T ss_dssp CTTEE
T ss_pred ccccc
Confidence 88886
No 54
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.98 E-value=1.8e-06 Score=70.13 Aligned_cols=73 Identities=18% Similarity=0.374 Sum_probs=17.0
Q ss_pred CCCcc-cccccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeeccc
Q psy9819 290 EGFNA-TYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQ 363 (377)
Q Consensus 290 ~GF~g-~~~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~ 363 (377)
.+|.. -.+++.| +++|.++|+|++. +|.|++||+|..|+..+ ++.|.... ..|.+ +|++.
T Consensus 33 ~~~~~~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i-~d~C~~~~-----------~~C~~--~C~~~ 98 (134)
T 2vh0_B 33 NEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFT-RKLCSLDN-----------GDCDQ--FCHEE 98 (134)
T ss_dssp -------------------------------------------------CCGGGTGG-----------GGCSS--EEEEE
T ss_pred ccccccCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCC-CCccccCC-----------CCCCC--EeECC
Confidence 34554 3356778 4679999999654 79999999999998632 12233210 12444 67777
Q ss_pred ccCeeeecCCCee
Q psy9819 364 VDLIRCTCRQVYL 376 (377)
Q Consensus 364 ~~~~~c~~~~~~~ 376 (377)
.++|+|.|++||+
T Consensus 99 ~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 99 QNSVVCSCARGYT 111 (134)
T ss_dssp TTEEEEECCTTEE
T ss_pred CCCEEEECCCCcE
Confidence 7777777777775
No 55
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.98 E-value=2.1e-06 Score=70.46 Aligned_cols=68 Identities=16% Similarity=0.384 Sum_probs=45.3
Q ss_pred cccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeeccccc-Ceeee
Q psy9819 297 QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVD-LIRCT 370 (377)
Q Consensus 297 ~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~-~~~c~ 370 (377)
++++| +++|.++|+|++. +|.|++||+|..|+..+ +.|.. |.|.. ..|.+ +|++..+ +|+|.
T Consensus 46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~--~~c~~----c~~~~----~~C~~--~C~~~~g~~y~C~ 113 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHK--DDQLI----CVNEN----GGCEQ--YCSDHTGTKRSCR 113 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEG--GGCCS----TTTGG----GGCSS--EEECCTTSCCEEE
T ss_pred ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCc--ccccc----ccCCC----CCccC--EeECCCCCCEEEE
Confidence 45678 4679999999654 79999999999998632 11110 00100 11333 7787777 88888
Q ss_pred cCCCee
Q psy9819 371 CRQVYL 376 (377)
Q Consensus 371 ~~~~~~ 376 (377)
|++||+
T Consensus 114 C~~Gy~ 119 (142)
T 2c4f_L 114 CHEGYS 119 (142)
T ss_dssp CCTTEE
T ss_pred CCCCce
Confidence 888886
No 56
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.96 E-value=2.1e-06 Score=70.51 Aligned_cols=64 Identities=30% Similarity=0.796 Sum_probs=47.8
Q ss_pred cCCCcC-CCCCC-CeecCC-CCeeeecCCCCccCCCCC---C---CCCCCCc---eee--cC-CCcccCCCCCCC----C
Q psy9819 30 NASLCY-NKCIY-GYCKGP-PDYSCQCELGWTGVDCSV---N---CLCNNHS---TCV--HG-IGICDECHDWTT----G 90 (377)
Q Consensus 30 ~~~~C~-~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~---~---C~C~~~g---~C~--~~-~~~C~~C~~g~~----G 90 (377)
.+..|. +||+| |+|++. ++|+|.|++||+|..|+. + |++.+++ +|+ .+ +++| .|++||+ |
T Consensus 46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C-~C~~Gy~l~~dG 124 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSC-RCHEGYSLLADG 124 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEE-ECCTTEEECTTS
T ss_pred ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEE-ECCCCceECCCC
Confidence 455675 68988 899864 489999999999999985 2 5666666 887 34 6788 6777777 6
Q ss_pred CCCC
Q psy9819 91 DHCQ 94 (377)
Q Consensus 91 ~~C~ 94 (377)
.+|+
T Consensus 125 ~~C~ 128 (142)
T 2c4f_L 125 VSCT 128 (142)
T ss_dssp SCEE
T ss_pred CCCC
Confidence 6664
No 57
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.96 E-value=2.4e-06 Score=81.84 Aligned_cols=87 Identities=22% Similarity=0.440 Sum_probs=24.8
Q ss_pred C-CeecC-CCCeeeecCCCCccCCCCCCC-------CCCCCceee---cCCCcccCCCCCCCCCCCCCCCCCcccCCCCC
Q psy9819 40 Y-GYCKG-PPDYSCQCELGWTGVDCSVNC-------LCNNHSTCV---HGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107 (377)
Q Consensus 40 ~-G~C~~-~~~~~C~C~~G~~G~~C~~~C-------~C~~~g~C~---~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~ 107 (377)
| ..|.. .++++|.|+++|+|..|+. | ++..+..+- .....|..|.-++.|.. |+.
T Consensus 302 Has~C~~~~g~~~C~C~~~ttG~~CE~-C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~------------CD~ 368 (426)
T 3zyj_B 302 HATVCVYDNSKLTCECEHNTTGPDCGK-CKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNV------------CDN 368 (426)
T ss_dssp SCSCEEEETTEEEECCCTTEESSSSCE-ECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------------
T ss_pred chhhcCCCCCCceeeCCCCCcCCCccc-cccccccCcccCCcccccCCCCCCcccCCCCCCCcCc------------ccc
Confidence 5 46874 3357999999999999994 2 122111110 11223322333333333 332
Q ss_pred CCccCCCCCCCCCcCcccccCCCcceecCCCCccCCCccCC
Q psy9819 108 EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL 148 (377)
Q Consensus 108 ~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G~~C~~C~ 148 (377)
...+|.++| +|.... .|.|++||.|..|+.|.
T Consensus 369 ---~t~~C~ngg-----~C~~~~-~C~C~~G~~G~~Ce~c~ 400 (426)
T 3zyj_B 369 ---ELLHCQNGG-----TCHNNV-RCLCPAAYTGILCEKLR 400 (426)
T ss_dssp -----------------------------------------
T ss_pred ---CcccCCCCC-----CcCCCC-CCcCCCCCcCCCCcCCC
Confidence 112577766 776544 89999999999998543
No 58
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.95 E-value=6.5e-06 Score=55.51 Aligned_cols=36 Identities=28% Similarity=0.646 Sum_probs=28.8
Q ss_pred ecCCCcC-CCCCC-Ceec------CCCCeeeecCCCCccCCCCC
Q psy9819 29 FNASLCY-NKCIY-GYCK------GPPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 29 ~~~~~C~-~~C~~-G~C~------~~~~~~C~C~~G~~G~~C~~ 64 (377)
.+++.|. +||+| |+|. ....|+|.|++||+|..|+.
T Consensus 6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence 3556676 69999 8993 24589999999999999985
No 59
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.91 E-value=4.4e-06 Score=54.25 Aligned_cols=29 Identities=38% Similarity=0.905 Sum_probs=25.2
Q ss_pred CCCCCCeecC---CCCeeeecCCCCccCCCCC
Q psy9819 36 NKCIYGYCKG---PPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 36 ~~C~~G~C~~---~~~~~C~C~~G~~G~~C~~ 64 (377)
+||+||+|.. .++|+|.|++||+|.+|+.
T Consensus 12 ~pC~nG~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 12 GYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp SSCSSEEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred CCCCCCEeeccCCCCCEEEECCCCCccCCCCc
Confidence 5999999984 2479999999999999985
No 60
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A
Probab=97.90 E-value=1.9e-05 Score=61.99 Aligned_cols=79 Identities=23% Similarity=0.500 Sum_probs=60.7
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGY 269 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p 269 (377)
..+|.|.|.+ +.+.+|.|+|.+.+++ .|..|++.|+||.. .++.+|+.. .|
T Consensus 28 ~~~C~w~I~~-------~~g~~i~l~f~d~f~le~~~~~~C~~D~l~i~dg~~-------------~~~~~CG~~---~p 84 (115)
T 3poj_A 28 SSECSYTIDL-------EEGFMVTLQFEDIFDIEDHPEVPCPYDYIKIKAGSK-------------VWGPFCGEK---SP 84 (115)
T ss_dssp TCEEEEEEEC-------CTTCCCEEEECSCCBBCCCSSSSSCSCEEEEEETTE-------------EEEEECBSS---CC
T ss_pred CCeEEEEEEc-------CCCCEEEEEEecceecccCCCCCCCCeEEEEEcCCc-------------ccccCcCCC---CC
Confidence 5679999999 5567889988733554 58899999999743 346788765 35
Q ss_pred cceecCCCeeEeccCCCCCC--CCCccccc
Q psy9819 270 EVLEAKSGVMTIHYKQGKPS--EGFNATYQ 297 (377)
Q Consensus 270 ~~c~~~sG~~~v~~~s~~c~--~GF~g~~~ 297 (377)
..+.+.++.+.|.|.++... .||.+.|.
T Consensus 85 ~~~~s~~~~l~i~F~Sd~~~~~~GF~~~y~ 114 (115)
T 3poj_A 85 EPISTQSHSIQILFRSDNSGENRGWRLSYR 114 (115)
T ss_dssp CCEECCCSEEEEEEECCSSCCCCBCEEEEE
T ss_pred CCEEecCCEEEEEEEcCCCCCCCCEEEEEE
Confidence 67888899999999998654 88988653
No 61
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.86 E-value=8e-06 Score=60.23 Aligned_cols=59 Identities=31% Similarity=0.763 Sum_probs=41.7
Q ss_pred CCCcC--CCCCCCeecCC-CCeeeecCCCCc--cCCCCC--CC----CCCCCceee--cCCCcccCCCCCCCCC
Q psy9819 31 ASLCY--NKCIYGYCKGP-PDYSCQCELGWT--GVDCSV--NC----LCNNHSTCV--HGIGICDECHDWTTGD 91 (377)
Q Consensus 31 ~~~C~--~~C~~G~C~~~-~~~~C~C~~G~~--G~~C~~--~C----~C~~~g~C~--~~~~~C~~C~~g~~G~ 91 (377)
+..|. +||+||+|++. ++|+|.|++||+ |..|+. +| +|.+ ++|+ .++++| .|++||+|.
T Consensus 5 ideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~-~~C~n~~g~y~C-~C~~G~~g~ 76 (82)
T 1emn_A 5 MDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGN-GTCKNVIGGFEC-TCEEGFEPG 76 (82)
T ss_dssp CCSSSSTTSCSSSEECCCSSCCCEECCTTEEEETTEEEECCGGGTCCTTSS-SCEEECSSSEEE-CCSSSSCCC
T ss_pred cccCCCCCCcCCCEEEecCCCEEEECCCCeECCCCccCCcccccCCCCCCC-CEeECCCCCEEe-ECCCCeEeC
Confidence 44554 68999999974 489999999997 887753 23 4654 5887 456778 566666653
No 62
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.85 E-value=1.2e-06 Score=73.62 Aligned_cols=90 Identities=17% Similarity=0.300 Sum_probs=56.7
Q ss_pred CCCCCCCCCc----c-ccc-ccC--CC---CCC--CCCCeecCC--------cccCCCCCC-CCCCCCCCCCCCccCCCc
Q psy9819 284 KQGKPSEGFN----A-TYQ-IFS--CP---DKC--PENRTCINN--------QCVCPPRRT-GPDCQEEICPNECHEFLN 341 (377)
Q Consensus 284 ~s~~c~~GF~----g-~~~-~~~--C~---~~C--~~~g~C~~g--------~C~C~~G~~-G~~C~~~~C~~~C~~~~~ 341 (377)
+.+.|.+||. + .+. +++ |. .+| .++++|++. +|.|++||. |..|+. |+.. ....+
T Consensus 24 y~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~--C~~~-~~~~y 100 (162)
T 1uzk_A 24 YICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEM--CPAV-NTSEY 100 (162)
T ss_dssp EEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTEE--CCCT-TSHHH
T ss_pred EEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCccc--CCCC-CCCCc
Confidence 5567889997 4 332 233 52 123 357788542 699999998 888863 4322 11246
Q ss_pred eEEeCC--CCCCC-----------------CCCCCCeecccccCeeeecCCCeeC
Q psy9819 342 HGTCDL--LLTGV-----------------HITHGRTLHYQVDLIRCTCRQVYLI 377 (377)
Q Consensus 342 ~c~C~~--g~~G~-----------------~C~~g~~~~~~~~~~~c~~~~~~~~ 377 (377)
+|+|++ ||.|. .|.+ ++|++.+++|+|+|++||.+
T Consensus 101 ~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g 154 (162)
T 1uzk_A 101 KILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYL 154 (162)
T ss_dssp HHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCB
T ss_pred eeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccC
Confidence 788887 88764 1555 59999999999999999963
No 63
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.82 E-value=5.4e-06 Score=55.93 Aligned_cols=37 Identities=27% Similarity=0.573 Sum_probs=28.8
Q ss_pred cccccCC-CCCCCCCCeec-----CC----cccCCCCCCCCCCCCCC
Q psy9819 295 TYQIFSC-PDKCPENRTCI-----NN----QCVCPPRRTGPDCQEEI 331 (377)
Q Consensus 295 ~~~~~~C-~~~C~~~g~C~-----~g----~C~C~~G~~G~~C~~~~ 331 (377)
..++++| .++|+|+|+|. ++ +|.|++||+|.+||..+
T Consensus 5 ~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v 51 (55)
T 3u7u_G 5 LVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYV 51 (55)
T ss_dssp EEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEEC
T ss_pred cccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccC
Confidence 3456788 56799999993 33 79999999999999754
No 64
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.80 E-value=1.1e-05 Score=66.31 Aligned_cols=58 Identities=29% Similarity=0.899 Sum_probs=38.1
Q ss_pred ecCCCcC-CCCCC-CeecCC-CCeeeecCCCCccCCCCC--CC-----CCCCCcee-e--cCCCcccCCCCCCC
Q psy9819 29 FNASLCY-NKCIY-GYCKGP-PDYSCQCELGWTGVDCSV--NC-----LCNNHSTC-V--HGIGICDECHDWTT 89 (377)
Q Consensus 29 ~~~~~C~-~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~--~C-----~C~~~g~C-~--~~~~~C~~C~~g~~ 89 (377)
..+..|. +||+| |+|++. ++|+|.|++||+|..|+. +| .|.+ +| + .+++.| .|++||+
T Consensus 46 ~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~--~C~~n~~g~y~C-~C~~Gy~ 116 (146)
T 1x7a_L 46 VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQ--FCKTGADSKVLC-SCTTGYR 116 (146)
T ss_dssp ----CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEECCTTSGGGSCSS--BCCCCSSSCCCC-BCCTTEE
T ss_pred CCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCCccccCCCCCCcC--CCCCCCCCCEEe-EcCCCcE
Confidence 3455674 68988 899864 489999999999999985 33 2322 56 4 345667 5666665
No 65
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=97.80 E-value=2.1e-05 Score=71.88 Aligned_cols=119 Identities=24% Similarity=0.462 Sum_probs=82.5
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcC----
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHR---- 267 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~---- 267 (377)
...|.|.|.+ +.+.+|+|+|. .+++ .|..|++.|+||.. .++.+|+...+.
T Consensus 24 ~~~C~w~I~~-------~~g~~I~L~F~-~f~le~~~~C~~D~l~v~dg~~-------------~~~~~CG~~~~~~~~~ 82 (278)
T 3dem_A 24 DSEVTWNITV-------PDGFRIKLYFM-HFNLESSYLCEYDYVKVETEDQ-------------VLATFCGRETTDTEQT 82 (278)
T ss_dssp SEEEEEEEEC-------CTTEEEEEEEE-EEECCCCGGGCSSEEEEECSSC-------------EEEEECSBSSSSSSCC
T ss_pred CCcEEEEEEE-------CCCCEEEEEEE-EEEeCCCCCCCCcEEEEecCCc-------------ccceEcCCcCCCcccC
Confidence 5679999999 55678999887 5554 38899999999743 346788765321
Q ss_pred -CCcceecCCCeeEeccCCCCCC----CCCccccc---ccCCCC------CCCCCCeecCC----cccCCCCCCCCCCCC
Q psy9819 268 -GYEVLEAKSGVMTIHYKQGKPS----EGFNATYQ---IFSCPD------KCPENRTCINN----QCVCPPRRTGPDCQE 329 (377)
Q Consensus 268 -~p~~c~~~sG~~~v~~~s~~c~----~GF~g~~~---~~~C~~------~C~~~g~C~~g----~C~C~~G~~G~~C~~ 329 (377)
.+..+.+.++.|.|.|.++... .||.+.+. .++|.. .|.. .|.+. .|.|.+||.....+
T Consensus 83 ~~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~~~~~C~~~~~~~~~c~~--~C~n~~g~~~C~C~~Gy~l~~d~- 159 (278)
T 3dem_A 83 PGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKEREDEELSCDH--YCHNYIGGYYCSCRFGYILHTDN- 159 (278)
T ss_dssp CTTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECCTTTC-----CCCSS--EEEEETTEEEEECCTTCEECTTS-
T ss_pred CCCccEEecCCeEEEEEecCcccccccceeEEEEEEeccccCCCCCCCcccCCc--CcCCccCCcEEEeCCcceeccCC-
Confidence 2356888999999999998654 58988664 346632 2332 25322 79999999876543
Q ss_pred CCCCCCccC
Q psy9819 330 EICPNECHE 338 (377)
Q Consensus 330 ~~C~~~C~~ 338 (377)
+.|...|..
T Consensus 160 ~~C~~~Cgg 168 (278)
T 3dem_A 160 RTCRVECSD 168 (278)
T ss_dssp SCEECCCCC
T ss_pred CCCcccCCC
Confidence 345556653
No 66
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=97.77 E-value=3.3e-05 Score=70.55 Aligned_cols=80 Identities=25% Similarity=0.495 Sum_probs=62.1
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGY 269 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p 269 (377)
..+|.|.|.+ +.+.+|.|+|.+.+++ .|..|++.|+||.. .++.+|+.. .|
T Consensus 190 ~~~C~w~i~~-------~~g~~i~l~f~~~f~le~~~~~~C~~D~l~i~dg~~-------------~~~~~CG~~---~p 246 (278)
T 3dem_A 190 SSECLYTIEL-------EEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK-------------VLGPFCGEK---AP 246 (278)
T ss_dssp SCEEEEEEEC-------CTTCCEEEEECSCCBBCCCSSSSSSSCEEEEEETTE-------------EEEEECBSS---CC
T ss_pred cCeEEEEEEe-------CCCcEEEEEEccccccccCCCCCCCCCEEEEecCCc-------------ccccccCCC---CC
Confidence 5679999999 5566899998732554 48999999999743 346788765 45
Q ss_pred cceecCCCeeEeccCCCCCC--CCCcccccc
Q psy9819 270 EVLEAKSGVMTIHYKQGKPS--EGFNATYQI 298 (377)
Q Consensus 270 ~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~ 298 (377)
..+.+.++.|.|.|.++... .||.+.|..
T Consensus 247 ~~~~s~~~~l~v~F~sd~~~~~~GF~~~y~~ 277 (278)
T 3dem_A 247 EPISTQSHSVLILFHSDNSGENRGWRLSYRA 277 (278)
T ss_dssp CCEECSCSEEEEEEECCSSCCCCBCEEEEEE
T ss_pred CCEEEcCCEEEEEEEECCCCCcCCEEEEEEE
Confidence 67889999999999998754 899887653
No 67
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.76 E-value=6e-06 Score=61.50 Aligned_cols=65 Identities=25% Similarity=0.547 Sum_probs=45.2
Q ss_pred cccCCC---CCCCCCCeecCC----cccCCCCCC-----CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccc
Q psy9819 297 QIFSCP---DKCPENRTCINN----QCVCPPRRT-----GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQV 364 (377)
Q Consensus 297 ~~~~C~---~~C~~~g~C~~g----~C~C~~G~~-----G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~ 364 (377)
++++|. ..|.+ ++|++. +|.|++||+ |..|+.. +.|.... ..|. +++|++.+
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~di---deC~~~~-----------~~C~-~~~C~n~~ 65 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDI---DECQRDP-----------LLCR-GGVCHNTE 65 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEEC---CHHHHCS-----------STTT-TSEEEEET
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCc---ccccCCC-----------CcCC-CCEeEcCC
Confidence 356773 23864 599654 799999998 6677532 4444321 1354 36999999
Q ss_pred cCeeeecCCCeeC
Q psy9819 365 DLIRCTCRQVYLI 377 (377)
Q Consensus 365 ~~~~c~~~~~~~~ 377 (377)
++|+|.|++||++
T Consensus 66 g~y~C~C~~G~~~ 78 (86)
T 1lmj_A 66 GSYRCECPPGHQL 78 (86)
T ss_dssp TEEEEESCTTSCC
T ss_pred CCEEEECcCCccc
Confidence 9999999999974
No 68
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=97.75 E-value=3.7e-05 Score=70.63 Aligned_cols=82 Identities=17% Similarity=0.395 Sum_probs=61.3
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCc---CC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMH---RG 268 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~---~~ 268 (377)
..+|.|.|.+ +.+.+|+|+|. .+++ .|..|++.|+||.. +++.+|+.... ..
T Consensus 23 ~~~C~w~I~~-------p~g~~I~L~F~-~f~le~~~~C~~D~l~I~dg~~-------------~~~~~CG~~~~~~~~~ 81 (286)
T 1nt0_A 23 HQDRSWTLTA-------PPGFRLRLYFT-HFNLELSYRCEYDFVKLTSGTK-------------VLATLCGQESTDTERA 81 (286)
T ss_dssp SCCEEEEEEC-------CTTEEEEEEEE-EEECCCCGGGCSSEEEEEETTE-------------EEEEECSSSCCSSCBC
T ss_pred CCcEEEEEEc-------CCCCEEEEEEE-EEEecCCCCCCCcEEEEECCCe-------------EeceECCCcCCCcccC
Confidence 5679999999 56678999987 5554 48899999999743 34778876410 13
Q ss_pred C--cceecCCCeeEeccCCCCCC----CCCcccccc
Q psy9819 269 Y--EVLEAKSGVMTIHYKQGKPS----EGFNATYQI 298 (377)
Q Consensus 269 p--~~c~~~sG~~~v~~~s~~c~----~GF~g~~~~ 298 (377)
| ..+.+.++.|.|.|.++... .||.+.+..
T Consensus 82 P~~~~~~S~~n~l~v~F~Sd~s~~~~~~GF~a~y~~ 117 (286)
T 1nt0_A 82 PGNDTFYSLGPSLKVTFHSDYSNEKPFTGFEAFYAA 117 (286)
T ss_dssp CTTCEEECSSSEEEEEEECCC----CCCEEEEEEEE
T ss_pred CCCceEEeCCCEEEEEEEeCCcCCcCcccEEEEEEe
Confidence 5 67889999999999998653 789986654
No 69
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.71 E-value=1.3e-05 Score=63.11 Aligned_cols=56 Identities=30% Similarity=0.727 Sum_probs=38.7
Q ss_pred cCCCCCC-CeecCC-CCeeeecCCCCccCCCCCC-----CCCCCCc---eee--cCCCcccCCCCCCCC
Q psy9819 34 CYNKCIY-GYCKGP-PDYSCQCELGWTGVDCSVN-----CLCNNHS---TCV--HGIGICDECHDWTTG 90 (377)
Q Consensus 34 C~~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~~-----C~C~~~g---~C~--~~~~~C~~C~~g~~G 90 (377)
|...|.+ |+|++. ++|+|.|++||+|..|+.. |.-.+++ +|+ .++++| .|++||+|
T Consensus 18 C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C-~C~~G~~~ 85 (114)
T 1aut_L 18 CASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRC-SCAPGYKL 85 (114)
T ss_dssp SSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEE-ECCTTEEE
T ss_pred ccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEe-ECCCCeeE
Confidence 3333865 899864 4899999999999999852 4222333 786 456778 57776664
No 70
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=97.68 E-value=4.9e-05 Score=72.12 Aligned_cols=106 Identities=24% Similarity=0.428 Sum_probs=77.5
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCC------CCcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDI------NVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGY 269 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~------~~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p 269 (377)
..+|.|.|.+ ..+.+|.|+|.+.+ +..|.+||+.|+||.. +++.+|+.. .|
T Consensus 190 ~~~C~w~i~~-------~~g~~i~l~f~~~~~~e~~~~~~C~~D~l~i~dg~~-------------~~~~~cG~~---~p 246 (361)
T 4aqb_A 190 SSECLYTIEL-------EEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK-------------VLGPFCGEK---AP 246 (361)
T ss_dssp SCEEEEEEEC-------CTTCEEEEEECSCCBBCCCSSSSSSSSEEEEEETTE-------------EEEEECBSS---CC
T ss_pred CceeeEEeee-------ccCcEEEEEEeecccccCCccCccCCCeEEEeeCCe-------------eEEeeCCCC---CC
Confidence 5679999999 56678999886322 3458999999999743 347788765 45
Q ss_pred cceecCCCeeEeccCCCCCC--CCCcccccc--cCCCCC-CCCCCeecCC----------cccCCCCCCC
Q psy9819 270 EVLEAKSGVMTIHYKQGKPS--EGFNATYQI--FSCPDK-CPENRTCINN----------QCVCPPRRTG 324 (377)
Q Consensus 270 ~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~--~~C~~~-C~~~g~C~~g----------~C~C~~G~~G 324 (377)
....+.++.++|.|.++... .||.+.|.. ..|+.+ ...+|.+... ++.|++||.-
T Consensus 247 ~~~~s~~n~~~i~F~SD~~~~~~GF~~~y~~~~~~C~~~~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l 316 (361)
T 4aqb_A 247 EPISTQSHSVLILFHSDNSGENRGWRLSYRAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKV 316 (361)
T ss_dssp CCEECSCSEEEEEEECCSCCCCCBCEEEEEEECCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEE
T ss_pred CCEeecCCeEEEEEEeCCCCCccceEEEEEEccCCCCCCCCCCCCEEecCCCCcccCCEEEEEeCCCeEE
Confidence 77889999999999998765 999996654 456432 4556666321 4889999863
No 71
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.62 E-value=2.7e-05 Score=48.50 Aligned_cols=32 Identities=25% Similarity=0.726 Sum_probs=26.1
Q ss_pred ccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCC
Q psy9819 298 IFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQE 329 (377)
Q Consensus 298 ~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~ 329 (377)
+++| .++|.++|+|++. +|.|++||+|.+||+
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 4567 4679999999643 799999999999974
No 72
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.62 E-value=3.1e-05 Score=48.27 Aligned_cols=34 Identities=35% Similarity=0.992 Sum_probs=26.7
Q ss_pred CCCcC-CCCCC-CeecC-CCCeeeecCCCCccCCCCC
Q psy9819 31 ASLCY-NKCIY-GYCKG-PPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 31 ~~~C~-~~C~~-G~C~~-~~~~~C~C~~G~~G~~C~~ 64 (377)
+..|. +||+| |+|++ .++|+|.|++||+|..|++
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 34454 68988 78985 4479999999999999873
No 73
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.54 E-value=7.1e-06 Score=54.86 Aligned_cols=36 Identities=8% Similarity=0.167 Sum_probs=31.1
Q ss_pred eEEeCCCCCCCCCCCCCeecc----cccCeeeecCCCeeC
Q psy9819 342 HGTCDLLLTGVHITHGRTLHY----QVDLIRCTCRQVYLI 377 (377)
Q Consensus 342 ~c~C~~g~~G~~C~~g~~~~~----~~~~~~c~~~~~~~~ 377 (377)
.|.|+++|+...|.||++|++ .+++|+|+|+++|++
T Consensus 4 ~C~C~~g~~~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G 43 (52)
T 3ca7_A 4 TYKCPETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMG 43 (52)
T ss_dssp CBCCCHHHHHHTSCTTCEEEEEEETTEEEEEEECCTTEES
T ss_pred eeECCCCCcCCcCCCCCEEecCccCCCCCEEEECCCCCcC
Confidence 588888888788999999996 577899999999974
No 74
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.54 E-value=6.3e-05 Score=50.34 Aligned_cols=28 Identities=32% Similarity=1.003 Sum_probs=24.5
Q ss_pred CCCC-Ceec--C-CCCeeeecCCCCccCCCCC
Q psy9819 37 KCIY-GYCK--G-PPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 37 ~C~~-G~C~--~-~~~~~C~C~~G~~G~~C~~ 64 (377)
||+| |+|+ . .++|+|.|++||+|..|+.
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 8998 8998 3 4589999999999999985
No 75
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.53 E-value=1.1e-05 Score=69.41 Aligned_cols=63 Identities=30% Similarity=0.805 Sum_probs=15.9
Q ss_pred ecCCCcC-CCCCC-CeecCC-CCeeeecCCCCccCCCCCC----C-----CCCCCceee--cCCCcccCCCCCCC----C
Q psy9819 29 FNASLCY-NKCIY-GYCKGP-PDYSCQCELGWTGVDCSVN----C-----LCNNHSTCV--HGIGICDECHDWTT----G 90 (377)
Q Consensus 29 ~~~~~C~-~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~~----C-----~C~~~g~C~--~~~~~C~~C~~g~~----G 90 (377)
..+..|. +||+| |+|++. ++|+|.|++||+|..|+.. | .|.+ +|. .+++.| .|++||+ |
T Consensus 40 ~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C-~C~~Gy~l~~dG 116 (195)
T 1nfu_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVC-SCARGYTLADNG 116 (195)
T ss_dssp -----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEE-ECCTTEEECTTS
T ss_pred CCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEE-ECCCCceeCCCC
Confidence 4456665 68988 899864 4899999999999999852 4 2433 786 456778 6777777 6
Q ss_pred CCCC
Q psy9819 91 DHCQ 94 (377)
Q Consensus 91 ~~C~ 94 (377)
..|+
T Consensus 117 ~~C~ 120 (195)
T 1nfu_B 117 KACI 120 (195)
T ss_dssp SCEE
T ss_pred Cccc
Confidence 6654
No 76
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.50 E-value=6.6e-05 Score=48.40 Aligned_cols=28 Identities=29% Similarity=0.878 Sum_probs=24.1
Q ss_pred CCCC-Ceec---CCCCeeeecCCCCccCCCCC
Q psy9819 37 KCIY-GYCK---GPPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 37 ~C~~-G~C~---~~~~~~C~C~~G~~G~~C~~ 64 (377)
||+| |+|+ ..++|+|.|++||+|..|+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 8998 8996 34589999999999999984
No 77
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.50 E-value=2e-05 Score=61.27 Aligned_cols=69 Identities=17% Similarity=0.466 Sum_probs=26.4
Q ss_pred CCCcc-cccccCCCC---CCCCCCeecCC----cccCCCCCCC---CCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCC
Q psy9819 290 EGFNA-TYQIFSCPD---KCPENRTCINN----QCVCPPRRTG---PDCQEEICPNECHEFLNHGTCDLLLTGVHITHGR 358 (377)
Q Consensus 290 ~GF~g-~~~~~~C~~---~C~~~g~C~~g----~C~C~~G~~G---~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~ 358 (377)
.||.+ .+++++|.. .|. .+|++. +|.|++||+| ..|+.. +.|.. ...|. +
T Consensus 20 ~~~~~~~Cd~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~di---deC~~------------~~~C~--~ 80 (107)
T 2w2n_E 20 NLYFQGAMGTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDI---DECQD------------PDTCS--Q 80 (107)
T ss_dssp CCCCSCCBSCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC-----------------------------
T ss_pred CCcCCCCCcCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccccc---cccCC------------CCCcC--C
Confidence 56666 666777742 254 478654 7999999998 667632 34432 12344 4
Q ss_pred eecccccCeeeecCCCeeC
Q psy9819 359 TLHYQVDLIRCTCRQVYLI 377 (377)
Q Consensus 359 ~~~~~~~~~~c~~~~~~~~ 377 (377)
+|++.+++|+|.|++||.+
T Consensus 81 ~C~n~~gsy~C~C~~Gy~~ 99 (107)
T 2w2n_E 81 LCVNLEGGYKCQCEEGFQL 99 (107)
T ss_dssp -------------------
T ss_pred eeecCCCCEEEECCCCceE
Confidence 8999999999999999974
No 78
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.48 E-value=3.3e-05 Score=57.40 Aligned_cols=59 Identities=29% Similarity=0.675 Sum_probs=41.2
Q ss_pred CCCcC---CCCCCCeecC-CCCeeeecCCCCc-----cCCCCC-------CCCCCCCceee--cCCCcccCCCCCCCCC
Q psy9819 31 ASLCY---NKCIYGYCKG-PPDYSCQCELGWT-----GVDCSV-------NCLCNNHSTCV--HGIGICDECHDWTTGD 91 (377)
Q Consensus 31 ~~~C~---~~C~~G~C~~-~~~~~C~C~~G~~-----G~~C~~-------~C~C~~~g~C~--~~~~~C~~C~~g~~G~ 91 (377)
+..|. .+|.||+|++ +++|+|.|++||+ |..|+. +..|. +++|. .++++| .|++||++.
T Consensus 3 ideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C-~C~~G~~~~ 79 (86)
T 1lmj_A 3 IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRC-ECPPGHQLS 79 (86)
T ss_dssp CCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEE-ESCTTSCCC
T ss_pred cccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEE-ECcCCcccC
Confidence 34554 3498899986 4589999999998 677762 22465 57897 566788 566666653
No 79
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.46 E-value=9e-05 Score=49.59 Aligned_cols=34 Identities=26% Similarity=0.687 Sum_probs=27.6
Q ss_pred ccCCCC----CCCCCCeec--CC----cccCCCCCCCCCCCCCC
Q psy9819 298 IFSCPD----KCPENRTCI--NN----QCVCPPRRTGPDCQEEI 331 (377)
Q Consensus 298 ~~~C~~----~C~~~g~C~--~g----~C~C~~G~~G~~C~~~~ 331 (377)
+++|.. +|.|+|+|+ +. +|.|++||+|.+|+..+
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence 466743 799999997 44 79999999999998753
No 80
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=97.43 E-value=0.00022 Score=65.33 Aligned_cols=81 Identities=20% Similarity=0.328 Sum_probs=61.0
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGY 269 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p 269 (377)
..+|.|.|.+ +.+.+|.|+|.+.|++ .|..|++.|+||. .+++.+|+.. .|
T Consensus 189 ~~~C~w~I~~-------~~g~~I~l~f~~~f~le~~~~~~C~~D~l~i~dg~-------------~~~~~~CG~~---~p 245 (286)
T 1nt0_A 189 LSSCAYNIRL-------EEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDK-------------REYGPFCGKT---LP 245 (286)
T ss_dssp SCEEEEEEEC-------CSSCEEEEEECSCCBBCCC----C--CEEEEECSS-------------CEEEEECBSS---CC
T ss_pred CCEEEEEEEC-------CCceEEEEEEeceEEeccCCCCCCCCcEEEEEeCC-------------cceEEEcCCC---CC
Confidence 5689999999 5567899998424554 4889999999973 3457889865 45
Q ss_pred cceecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819 270 EVLEAKSGVMTIHYKQGKPS--EGFNATYQIF 299 (377)
Q Consensus 270 ~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~~ 299 (377)
..+.+.++.|.|.|.++... .||.+.|...
T Consensus 246 ~~~~S~~n~l~i~F~sd~~~~~~GF~~~y~~~ 277 (286)
T 1nt0_A 246 PRIETDSNKVTITFTTDESGNHTGWKIHYTST 277 (286)
T ss_dssp CCEECSSSEEEEEEECCSCCCCCBCEEEEEEE
T ss_pred CCEEeeCCEEEEEEEeCCCCCCCCEEEEEEEe
Confidence 67889999999999998754 8999977643
No 81
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=97.40 E-value=0.00011 Score=74.04 Aligned_cols=84 Identities=26% Similarity=0.613 Sum_probs=66.9
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCCc----------CCCCceEeeCCCCccccccCcccCCCcccCCcCCCC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINVP----------CNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~~----------C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~ 265 (377)
..+|.|.|.+ +++..|.|+|. .|+++ |..||+.||||.... +++++.+|+..
T Consensus 152 n~~C~W~I~~-------p~g~~I~L~F~-~F~lE~~~~~~~~~~C~~D~l~I~dG~~~~---------~~~lg~~CG~~- 213 (577)
T 4gz9_A 152 SLECTYIIFA-------PKMSEIILEFE-SFDLEQDSNPPGGMFCRYDRLEIWDGFPEV---------GPHIGRYCGQK- 213 (577)
T ss_dssp SCEEEEEEEC-------GGGCCEEEEEE-EEECCCCCSCSTTCCCCSSEEEEESSSTTT---------SCEEEEECSSS-
T ss_pred CceEEEEEEE-------CCCCEEEEEEE-EEEeeecCCCCCCCccCccEEEEEcCCCCC---------CceeEEEeCCC-
Confidence 5679999999 45668888887 55443 899999999986532 67889999875
Q ss_pred cCCCcceecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819 266 HRGYEVLEAKSGVMTIHYKQGKPS--EGFNATYQIF 299 (377)
Q Consensus 266 ~~~p~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~~ 299 (377)
.|..+.+.++.|.|.|.++... .||.+.|...
T Consensus 214 --~P~~i~S~~n~l~i~F~SD~s~~~~GF~a~y~~v 247 (577)
T 4gz9_A 214 --TPGRIRSSSGVLSMVFYTDSAIAKEGFSANYSVL 247 (577)
T ss_dssp --CCCCEEECSSEEEEEEECCSSCCCCEEEEEEEEC
T ss_pred --CCCCcceeCCEEEEEEEECCCCCCceEEEEEEEE
Confidence 4677899999999999998765 9999977654
No 82
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.39 E-value=0.0002 Score=60.40 Aligned_cols=38 Identities=24% Similarity=0.684 Sum_probs=33.0
Q ss_pred eEeeecCCCcCCCCCC-CeecCCCCeeeecCCCCccCCCCC
Q psy9819 25 LLYIFNASLCYNKCIY-GYCKGPPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 25 ~~~~~~~~~C~~~C~~-G~C~~~~~~~C~C~~G~~G~~C~~ 64 (377)
+-.....+.|+++|+| |.|+.|+ +|.|++||+|..|+.
T Consensus 142 ~~K~C~~~~C~~~C~ngG~Cv~P~--~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 142 FFKTCQQAECPGGCRNGGFCNERR--ICECPDGFHGPHCEG 180 (188)
T ss_dssp EEEEECCCCCTTCCCTTCEECTTS--CEECCTTCBTTTTCB
T ss_pred ecccccCCccCCCCCCCCEeCCCC--cccCcCCCCCCCCcC
Confidence 4445667999999998 8999987 999999999999985
No 83
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=97.38 E-value=0.00012 Score=71.75 Aligned_cols=84 Identities=25% Similarity=0.603 Sum_probs=66.5
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC----------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~ 265 (377)
..+|.|.|.+ +.+.+|.|+|. .|++ .|..||+.||||.... +++++.+|+..
T Consensus 34 ~~~C~w~I~~-------~~g~~I~l~f~-~f~le~~~~~~~~~~C~~D~l~i~dg~~~~---------~~~~~~~CG~~- 95 (450)
T 2qqm_A 34 SLECTYIVFA-------PKMSEIILEFE-SFDLEPDSNPPGGMFCRYDRLEIWDGFPDV---------GPHIGRYCGQK- 95 (450)
T ss_dssp SCEEEEEEEC-------GGGCCEEEEEE-EEECCCC----CCCSSCSSEEEEESSSTTT---------SCEEEEECTTC-
T ss_pred CCeEEEEEEe-------CCCCEEEEEEE-EEEeEeccCCCCCCCCCCcEEEEecCCCCC---------CccceeecCCc-
Confidence 5789999999 44568999887 4443 5899999999986522 56789999875
Q ss_pred cCCCcceecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819 266 HRGYEVLEAKSGVMTIHYKQGKPS--EGFNATYQIF 299 (377)
Q Consensus 266 ~~~p~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~~ 299 (377)
.|..+.+.++.|.|.|.++... .||.+.|...
T Consensus 96 --~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~ 129 (450)
T 2qqm_A 96 --TPGRIRSSSGILSMVFYTDSAIAKEGFSANYSVL 129 (450)
T ss_dssp --CCCEEEECSSEEEEEEECCSSCCCCEEEEEEEEC
T ss_pred --CCCcEEEcCCEEEEEEEeCCccccCCeEEEEecc
Confidence 3567899999999999998754 9999977654
No 84
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.37 E-value=5.9e-05 Score=56.14 Aligned_cols=60 Identities=22% Similarity=0.553 Sum_probs=39.0
Q ss_pred ccCCC-CC--CCCCCeecCC----cccCCCCCC----CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccC
Q psy9819 298 IFSCP-DK--CPENRTCINN----QCVCPPRRT----GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDL 366 (377)
Q Consensus 298 ~~~C~-~~--C~~~g~C~~g----~C~C~~G~~----G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~ 366 (377)
+++|. ++ | ++++|++. +|.|++||+ |..|+.. +.|..+ .|. ++|++.+++
T Consensus 3 ideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~di---deC~~~-------------~C~--~~C~n~~g~ 63 (87)
T 1z6c_A 3 VDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDI---DECSEN-------------MCA--QLCVNYPGG 63 (87)
T ss_dssp SCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECC---CHHHHS-------------CCS--SEECCCSSS
T ss_pred cccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCc---CeeCCC-------------CCC--CEEEccCCC
Confidence 46673 23 8 78899654 799999999 7788632 333221 233 377777777
Q ss_pred eeeec--CCCee
Q psy9819 367 IRCTC--RQVYL 376 (377)
Q Consensus 367 ~~c~~--~~~~~ 376 (377)
|+|+| ..||.
T Consensus 64 y~C~C~g~~G~~ 75 (87)
T 1z6c_A 64 YTCYCDGKKGFK 75 (87)
T ss_dssp CCEECCSSSCCB
T ss_pred EEEECCCCcCCc
Confidence 77777 45553
No 85
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=97.35 E-value=0.00018 Score=70.57 Aligned_cols=84 Identities=21% Similarity=0.550 Sum_probs=66.0
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC----------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~ 265 (377)
..+|.|.|.+ +++..|.|+|. .|++ .|.+|++.||||.... .++++.+|+..
T Consensus 31 ~~~C~w~I~~-------~~g~~I~L~F~-~f~le~~~~~~~~~~C~~D~l~i~dg~~~~---------~~~~~~~CG~~- 92 (460)
T 2qqo_A 31 NLDCTFTILA-------KPKMEIILQFL-IFDLEHDPLQVGEGDCKYDWLDIWDGIPHV---------GPLIGKYCGTK- 92 (460)
T ss_dssp SCEEEEEEEC-------CTTCEEEEEEE-EEECCCC--------CCSSEEEEESSSTTT---------SCEEEEECTTC-
T ss_pred CCEEEEEEEc-------CCCCEEEEEEE-EEEcccccccccCCCCCCCEEEEEcCCCCC---------CcccceEeCCc-
Confidence 5679999999 56678999887 4443 4889999999986522 56788999875
Q ss_pred cCCCcceecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819 266 HRGYEVLEAKSGVMTIHYKQGKPS--EGFNATYQIF 299 (377)
Q Consensus 266 ~~~p~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~~ 299 (377)
.|..+.+.++.+.|.|.++... .||.+.|...
T Consensus 93 --~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~ 126 (460)
T 2qqo_A 93 --TPSELRSSTGILSLTFHTDMAVAKDGFSARYYLV 126 (460)
T ss_dssp --CCCCEEECSSEEEEEEECCSSCCCCEEEEEEEEE
T ss_pred --CCcCEEeeCCEEEEEEeccceeecCcEEEEEEEE
Confidence 3567889999999999998754 9999977654
No 86
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.35 E-value=2.6e-05 Score=63.18 Aligned_cols=63 Identities=30% Similarity=0.815 Sum_probs=15.8
Q ss_pred ecCCCcC-CCCCC-CeecCC-CCeeeecCCCCccCCCCCC----CC-----CCCCceee--cCCCcccCCCCCCC----C
Q psy9819 29 FNASLCY-NKCIY-GYCKGP-PDYSCQCELGWTGVDCSVN----CL-----CNNHSTCV--HGIGICDECHDWTT----G 90 (377)
Q Consensus 29 ~~~~~C~-~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~~----C~-----C~~~g~C~--~~~~~C~~C~~g~~----G 90 (377)
..+..|. +||+| |+|++. ++|+|.|++||+|..|+.. |. |.+ +|+ .+++.| .|++||+ |
T Consensus 40 ~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C-~C~~Gy~l~~~g 116 (134)
T 2vh0_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVC-SCARGYTLADNG 116 (134)
T ss_dssp -----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEE-ECCTTEEECTTS
T ss_pred CCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEE-ECCCCcEECCCC
Confidence 3445564 68988 899864 4899999999999999852 42 332 776 455778 6777777 6
Q ss_pred CCCC
Q psy9819 91 DHCQ 94 (377)
Q Consensus 91 ~~C~ 94 (377)
.+|+
T Consensus 117 ~~C~ 120 (134)
T 2vh0_B 117 KACI 120 (134)
T ss_dssp SCEE
T ss_pred CccC
Confidence 6664
No 87
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}
Probab=97.30 E-value=0.00037 Score=68.21 Aligned_cols=82 Identities=22% Similarity=0.476 Sum_probs=65.7
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcc
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEV 271 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~ 271 (377)
...|.|.|.+ +++.+|+|+|. .+++ .|..||+.|+|+.. ..+++.+|+.. .|..
T Consensus 24 ~~~C~w~I~~-------~~g~~i~L~f~-~f~le~~~~C~~D~l~i~d~~~-----------~~~l~~~CG~~---~p~~ 81 (457)
T 3kq4_B 24 GINCTWHILV-------QPNHLIHLMFE-TFHLEFHYNCTNDYLEVYDTDS-----------ETSLGRYCGKS---IPPS 81 (457)
T ss_dssp SCCCEEEEEC-------CSSEEEEECCS-CCCCCCCSSCCSSEEEEECTTS-----------SSEEEEECSSC---CCSC
T ss_pred CCcEEEEEEc-------CCCCEEEEEEE-eeecccCCCCCccEEEEEcCCC-----------CcccceeCCCC---CCCc
Confidence 5689999999 56779999998 6665 38899999999743 45678899875 3567
Q ss_pred eecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819 272 LEAKSGVMTIHYKQGKPS--EGFNATYQIF 299 (377)
Q Consensus 272 c~~~sG~~~v~~~s~~c~--~GF~g~~~~~ 299 (377)
+.+.++.|.|.|.++... .||.+.+...
T Consensus 82 ~~S~~n~l~v~F~sd~~~~~~GF~~~y~~~ 111 (457)
T 3kq4_B 82 LTSSGNSLMLVFVTDSDLAYEGFLINYEAI 111 (457)
T ss_dssp EECSSSEEEEEEECCSSCCCSCCCCEEEEE
T ss_pred EEEeCCEEEEEEEecCccccCceeEeeecc
Confidence 888999999999998654 8999977654
No 88
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.25 E-value=9.5e-05 Score=49.42 Aligned_cols=30 Identities=30% Similarity=0.875 Sum_probs=25.2
Q ss_pred CCCCCC-Ceec---CCCCeeeecCCCCccCCCCC
Q psy9819 35 YNKCIY-GYCK---GPPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 35 ~~~C~~-G~C~---~~~~~~C~C~~G~~G~~C~~ 64 (377)
.+||+| |+|+ ..++|+|.|++||+|..|++
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 368998 8996 34479999999999999985
No 89
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.22 E-value=0.00012 Score=47.06 Aligned_cols=28 Identities=21% Similarity=0.512 Sum_probs=23.8
Q ss_pred CCCCCCeec--CC----cccCCCCCCCCCCCCCC
Q psy9819 304 KCPENRTCI--NN----QCVCPPRRTGPDCQEEI 331 (377)
Q Consensus 304 ~C~~~g~C~--~g----~C~C~~G~~G~~C~~~~ 331 (377)
+|.|+|+|+ +. +|.|++||+|.+|+..+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 799999996 33 79999999999998653
No 90
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.21 E-value=0.0002 Score=49.76 Aligned_cols=29 Identities=38% Similarity=0.993 Sum_probs=25.2
Q ss_pred CCCCC-CeecC------CCCeeeecCCCCccCCCCC
Q psy9819 36 NKCIY-GYCKG------PPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 36 ~~C~~-G~C~~------~~~~~C~C~~G~~G~~C~~ 64 (377)
+||+| |+|+. .++|+|.|++||+|..|++
T Consensus 12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE 47 (63)
T ss_dssp TTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred CcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCc
Confidence 68998 89984 3589999999999999985
No 91
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=97.15 E-value=0.00046 Score=69.62 Aligned_cols=86 Identities=23% Similarity=0.498 Sum_probs=65.4
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCC---CcCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcce
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDIN---VPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVL 272 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~---~~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c 272 (377)
..+|.|.|.++. ...+|.|+|...|+ ..|..||+.|+||.... +++++.+|+.. .|..+
T Consensus 33 n~~C~W~I~~p~------~~~~I~L~F~~~f~le~~~C~~Dyl~I~dG~~~~---------~~~lg~~CG~~---~p~~i 94 (577)
T 4gz9_A 33 SEKCEWLIQAPE------PYQRIMINFNPHFDLEDRDCKYDYVEVIDGENEG---------GRLWGKFCGKI---APSPV 94 (577)
T ss_dssp SCEEEEEEECSS------TTCCEEEEECSCCBCCCGGGTSSEEEEEESSSTT---------SEEEEEECSSS---CCCCE
T ss_pred CCeEEEEEEECC------CCcEEEEEEEeeeeecCCCCCccEEEEEeCCCCC---------CcEEEEecCCC---CCCCE
Confidence 567999999843 22478888853343 45899999999986532 56789999865 45678
Q ss_pred ecCCCeeEeccCCCCCC--CCCccccccc
Q psy9819 273 EAKSGVMTIHYKQGKPS--EGFNATYQIF 299 (377)
Q Consensus 273 ~~~sG~~~v~~~s~~c~--~GF~g~~~~~ 299 (377)
.+.++.|.|.|.++... .||.+.+...
T Consensus 95 ~S~~n~l~v~F~SD~s~~~~GF~a~y~~~ 123 (577)
T 4gz9_A 95 VSSGPFLFIKFVSDYETHGAGFSIRYEIF 123 (577)
T ss_dssp ECSSSEEEEEEECCSSCCCCBCEEEEEEC
T ss_pred EEeCCeEEEEEEECCCCCCCCeEEEEEEe
Confidence 89999999999998755 8999977653
No 92
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.14 E-value=0.00026 Score=59.63 Aligned_cols=36 Identities=33% Similarity=0.790 Sum_probs=31.3
Q ss_pred cccccCCCCCCCCCCeec-CCcccCCCCCCCCCCCCC
Q psy9819 295 TYQIFSCPDKCPENRTCI-NNQCVCPPRRTGPDCQEE 330 (377)
Q Consensus 295 ~~~~~~C~~~C~~~g~C~-~g~C~C~~G~~G~~C~~~ 330 (377)
.+....|+.+|+|+|.|+ .++|.|++||+|.+|+..
T Consensus 145 ~C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 145 TCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEGT 181 (188)
T ss_dssp EECCCCCTTCCCTTCEECTTSCEECCTTCBTTTTCBC
T ss_pred cccCCccCCCCCCCCEeCCCCcccCcCCCCCCCCcCC
Confidence 556678998999999995 569999999999999974
No 93
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=97.13 E-value=0.00032 Score=66.48 Aligned_cols=116 Identities=21% Similarity=0.286 Sum_probs=73.1
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCc-CCCc
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMH-RGYE 270 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~-~~p~ 270 (377)
..+|.|.|.+ +.+.+|+|+|. .|++ .|.+||+.|+||.... ..+.|..+..... ..+.
T Consensus 24 n~~C~W~I~~-------~~g~~I~l~F~-~f~lE~~~~C~~D~l~i~dg~~~~---------~~~cG~~~~~~~~~~~~~ 86 (361)
T 4aqb_A 24 DSEVTWNITV-------PDGFRIKLYFM-HFNLESSYLCEYDYVKVETEDQVL---------ATFCGRETTDTEQTPGQE 86 (361)
T ss_dssp SEEEEEEEEC-------CTTEEEEEEEE-EEECCCCGGGCSSEEEEECSSCEE---------EEECSBSSSSSSCCCTTC
T ss_pred CCeEEEEEEE-------CCCCEEEEEEe-EEEecCCCCCCceEEEEccCCccc---------ceeeccccCCCccCCCcc
Confidence 5679999999 56678999987 5554 4789999999975422 2223333322211 1234
Q ss_pred ceecCCCeeEeccCCCCCC----CCCcccccc---cCCCCC----CCCCCeec--CC--cccCCCCCCCCCCC
Q psy9819 271 VLEAKSGVMTIHYKQGKPS----EGFNATYQI---FSCPDK----CPENRTCI--NN--QCVCPPRRTGPDCQ 328 (377)
Q Consensus 271 ~c~~~sG~~~v~~~s~~c~----~GF~g~~~~---~~C~~~----C~~~g~C~--~g--~C~C~~G~~G~~C~ 328 (377)
.+.+..+.|+|.|.++... .||.+.+.. .+|... -.-...|. .+ .|.|..+|....-.
T Consensus 87 ~~~S~~n~l~v~F~SD~s~~~~~~GF~a~y~~~~~~~c~~~~~~~~~~~~~c~n~~g~~~csC~~g~~l~~~~ 159 (361)
T 4aqb_A 87 VVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDN 159 (361)
T ss_dssp CEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECCGGGTGGGSSSCCSSEEEEETTEEEEECCTTCEECTTS
T ss_pred ceeccCCEeEEEEEeCCcccccccccccceeeccccccccccccCCCCCccCCccCCCceeccCCCeEEeccc
Confidence 5788889999999998654 489886543 344211 11122332 22 69999999765443
No 94
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.10 E-value=0.00015 Score=46.84 Aligned_cols=32 Identities=31% Similarity=0.704 Sum_probs=25.0
Q ss_pred ccCCC----CCCCCCCeecC--C----cccCCCCCCCCCCCCC
Q psy9819 298 IFSCP----DKCPENRTCIN--N----QCVCPPRRTGPDCQEE 330 (377)
Q Consensus 298 ~~~C~----~~C~~~g~C~~--g----~C~C~~G~~G~~C~~~ 330 (377)
+++|+ ++|.| |+|++ + .|+|++||+|.+||..
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 45663 57999 89952 1 6999999999999864
No 95
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.08 E-value=0.00013 Score=48.62 Aligned_cols=29 Identities=34% Similarity=0.909 Sum_probs=20.0
Q ss_pred CCCCC-CeecC-----CCCeeeecCCCCccCCCCC
Q psy9819 36 NKCIY-GYCKG-----PPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 36 ~~C~~-G~C~~-----~~~~~C~C~~G~~G~~C~~ 64 (377)
+||+| |+|+. .++|+|.|++||+|..|+.
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 46777 67773 2357788888888877763
No 96
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.05 E-value=0.0002 Score=56.86 Aligned_cols=51 Identities=25% Similarity=0.553 Sum_probs=41.9
Q ss_pred CCCCCCeecCC-------cccCCCCCCCCCCCCCCCCCCccCC---CceEEeCCCCCCCCCC
Q psy9819 304 KCPENRTCINN-------QCVCPPRRTGPDCQEEICPNECHEF---LNHGTCDLLLTGVHIT 355 (377)
Q Consensus 304 ~C~~~g~C~~g-------~C~C~~G~~G~~C~~~~C~~~C~~~---~~~c~C~~g~~G~~C~ 355 (377)
+|+|+|+|++. +|.|++||+|.+||+++. .+|... .+++++..+++|..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~-~~C~~g~G~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-KTCYEGNGHFYRGKASTDTMGRPCL 62 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS-CCSBCSSCTTCCSCCCBBTTSCBBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc-CCCcccccccceeeccccccCCccc
Confidence 59999999543 699999999999998642 356433 5789999999999998
No 97
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}
Probab=97.02 E-value=0.00077 Score=65.96 Aligned_cols=83 Identities=23% Similarity=0.509 Sum_probs=65.4
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC----cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcc
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEV 271 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~ 271 (377)
...|.|.|.+ +.+.+|.|.|. .+++ .|..|++.||||.... +.+++.+|+.. .|..
T Consensus 257 ~~~C~w~I~~-------~~~~~i~l~f~-~f~le~~~~C~~D~l~i~dg~~~~---------~~~l~~~CG~~---~p~~ 316 (457)
T 3kq4_B 257 SSECYWWLKS-------SHGSAFELEFK-DFHLEHHPNCTLDYLAVYDGPSSN---------SHLLTQLCGDE---KPPL 316 (457)
T ss_dssp SCEEEEEECC-------STTCCEEEEEE-ECCCCCCTTCCSSEEEEEESSSTT---------SEEEEEECSSC---CCCC
T ss_pred CCEEEEEEEe-------CCCCEEEEEEE-eeeecCCCCcCCCEEEEEeCCCCC---------chhhhhhcCCc---CCCC
Confidence 5679999999 55678999887 5554 4899999999986522 56788999875 4567
Q ss_pred eecCCCeeEeccCCCCCC--CCCcccccc
Q psy9819 272 LEAKSGVMTIHYKQGKPS--EGFNATYQI 298 (377)
Q Consensus 272 c~~~sG~~~v~~~s~~c~--~GF~g~~~~ 298 (377)
+.+.++.|.|.|.++... .||.+.|..
T Consensus 317 i~S~~n~l~v~f~sd~~~~~~GF~a~y~~ 345 (457)
T 3kq4_B 317 IRSSGDSMFIKLRTDEGQQGRGFKAEYRQ 345 (457)
T ss_dssp EECSSSCEEEEEECCSSCCCCCCEEEEEE
T ss_pred EEecCCEEEEEEEeCCcccCCeEEEEEEe
Confidence 888999999999988654 899997753
No 98
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.00 E-value=0.00024 Score=52.78 Aligned_cols=53 Identities=30% Similarity=0.753 Sum_probs=37.8
Q ss_pred CCCCeecCC-CCeeeecCCCCc----cCCCCC--CC---CCCCCceee--cCCCcccCCCCCCCCCCCC
Q psy9819 38 CIYGYCKGP-PDYSCQCELGWT----GVDCSV--NC---LCNNHSTCV--HGIGICDECHDWTTGDHCQ 94 (377)
Q Consensus 38 C~~G~C~~~-~~~~C~C~~G~~----G~~C~~--~C---~C~~~g~C~--~~~~~C~~C~~g~~G~~C~ 94 (377)
|.+++|++. ++|+|.|++||+ |..|+. +| +|. ++|. .+++.| .|+ ++.|..++
T Consensus 13 C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~g~y~C-~C~-g~~G~~~~ 77 (87)
T 1z6c_A 13 CGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYPGGYTC-YCD-GKKGFKLA 77 (87)
T ss_dssp BTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCSSSCCE-ECC-SSSCCBCC
T ss_pred CCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccCCCEEE-ECC-CCcCCccc
Confidence 755889864 489999999999 777863 23 454 5786 456788 676 66666553
No 99
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=96.99 E-value=0.0005 Score=63.82 Aligned_cols=58 Identities=28% Similarity=0.796 Sum_probs=39.4
Q ss_pred cCCCcC-CCCCC-CeecCC-CCeeeecCCCCccCCCCC---CC------CCCCCceee--cCCCcccCCCCCCCC
Q psy9819 30 NASLCY-NKCIY-GYCKGP-PDYSCQCELGWTGVDCSV---NC------LCNNHSTCV--HGIGICDECHDWTTG 90 (377)
Q Consensus 30 ~~~~C~-~~C~~-G~C~~~-~~~~C~C~~G~~G~~C~~---~C------~C~~~g~C~--~~~~~C~~C~~g~~G 90 (377)
.+..|. +||+| |+|.+. ++|+|.|++||+|..|+. +| +|.+ +|. .+.+.| .|+++|.|
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C-~C~~g~~~ 75 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTC-SCAQGYRL 75 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEE-ECCTTEEC
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEE-eccccccc
Confidence 455666 68988 889864 489999999999999983 23 2333 665 345677 46655554
No 100
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=96.96 E-value=0.00018 Score=72.70 Aligned_cols=53 Identities=21% Similarity=0.473 Sum_probs=45.3
Q ss_pred CCCCCCCcc-ccc-ccCCCCCCCCCCeecCCcccCCCCCCCCCCCCCC--CCCCccC
Q psy9819 286 GKPSEGFNA-TYQ-IFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEI--CPNECHE 338 (377)
Q Consensus 286 ~~c~~GF~g-~~~-~~~C~~~C~~~g~C~~g~C~C~~G~~G~~C~~~~--C~~~C~~ 338 (377)
..|.+||.+ .+. ...|+..|++||.|++|+|.|.+||+|.+|+++. ||..|..
T Consensus 520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~~~~~~~~~~~~~ 576 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQGSCVCDEQWGGLYCDEPETSLPTQLKD 576 (725)
T ss_dssp CCTTCCEEEEEEEEESCSSGGGGGSEEEETTEEEECTTEESTTSCEESSCCCSCEEE
T ss_pred CccCCCcccccccccCCCCcccCCCcEECCCCEeeCCCccCCCcCccCCCCchhhhc
Confidence 468899999 677 4889999999999999999999999999999765 4566653
No 101
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.95 E-value=0.038 Score=56.86 Aligned_cols=51 Identities=18% Similarity=0.509 Sum_probs=33.5
Q ss_pred CeecCC----cccCCCCCC---CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCeeeecCCCee
Q psy9819 309 RTCINN----QCVCPPRRT---GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYL 376 (377)
Q Consensus 309 g~C~~g----~C~C~~G~~---G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~c~~~~~~~ 376 (377)
.+|++. +|.|++||+ |..|+.. +.|... ..|.+ +|++.+++|+|.|++||.
T Consensus 306 ~~C~~~~~~~~C~C~~G~~~~~~~~C~di---deC~~~------------~~C~~--~C~n~~g~y~C~C~~G~~ 363 (699)
T 1n7d_A 306 HVCNDLKIGYECLCPDGFQLVAQRRCEDI---DECQDP------------DTCSQ--LCVNLEGGYKCQCEEGFQ 363 (699)
T ss_dssp TTCCCCTTCCCCCCCSSSCCCSSSCCCCC---CCCSSS------------SSCTT--TCCBCSSCBCCCCCSSCB
T ss_pred CCcccCCCCcEEeCCCCeEcCCCCcccCc---cccCCC------------Ccccc--ccccCCCCeeeeeecccc
Confidence 356543 799999999 7788742 444321 12333 677777788888887775
No 102
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.89 E-value=0.00027 Score=48.12 Aligned_cols=28 Identities=36% Similarity=0.979 Sum_probs=23.9
Q ss_pred CCCC-Ceec-----CCCCeeeecCCCCccCCCCC
Q psy9819 37 KCIY-GYCK-----GPPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 37 ~C~~-G~C~-----~~~~~~C~C~~G~~G~~C~~ 64 (377)
+|+| |+|. ....|.|.|++||+|.+|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 7999 7998 23378999999999999985
No 103
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.78 E-value=0.00044 Score=47.51 Aligned_cols=34 Identities=29% Similarity=0.707 Sum_probs=27.3
Q ss_pred CCCcC-CCCCCC---eecCC-CCeeeecCCCCc-cCCCCC
Q psy9819 31 ASLCY-NKCIYG---YCKGP-PDYSCQCELGWT-GVDCSV 64 (377)
Q Consensus 31 ~~~C~-~~C~~G---~C~~~-~~~~C~C~~G~~-G~~C~~ 64 (377)
+..|. +||+|| +|++. ++|+|.|++||+ |.+|+.
T Consensus 11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred CCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence 34564 799885 89864 489999999999 999974
No 104
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.78 E-value=0.012 Score=60.78 Aligned_cols=148 Identities=22% Similarity=0.537 Sum_probs=81.9
Q ss_pred CCCCCeecCCCCeee----ecCCCCccCCCCC-CC-----CCCCCceeecCCCcccC----CCCCCCCCCCC---CCC-C
Q psy9819 37 KCIYGYCKGPPDYSC----QCELGWTGVDCSV-NC-----LCNNHSTCVHGIGICDE----CHDWTTGDHCQ---YCR-A 98 (377)
Q Consensus 37 ~C~~G~C~~~~~~~C----~C~~G~~G~~C~~-~C-----~C~~~g~C~~~~~~C~~----C~~g~~G~~C~---~C~-~ 98 (377)
.|.+|.|+. .++.| .|..|.-...|.. .| .|. .++|++.+.+| . |..+..+..|+ .|. +
T Consensus 182 ~C~~g~Ci~-~~~~CDg~~dC~dgsDE~~C~~~~C~~~~f~C~-~g~Ci~~~~~C-dg~~dC~dgsde~~C~~~~~C~~~ 258 (699)
T 1n7d_A 182 HCLSGECIH-SSWRCDGGPDCKDKSDEENCAVATCRPDEFQCS-DGNCIHGSRQC-DREYDCKDMSDEVGCVNVTLCEGP 258 (699)
T ss_dssp CCSSSCCCS-TTCTTSSSCCSTTSCSSCSCCCCCCCSSEEESS-SSCEEETTCCS-SSCCCSSSSCSSSSTTCCCCCCST
T ss_pred ecCCCceEe-chhccCCCCCCCCCcccccCCCcccCCCcEecC-CCceeeeeccc-CCCCCCCCCCccCCCCCCCcccCC
Confidence 477788884 46777 7888887777864 34 354 46788777777 4 77777776664 232 1
Q ss_pred CcccCCCCCCCccC--------CCCCCCCCcC-----cccccCCCcce--ecCCCCccCCCccCCCCccCCCCCCCCCCC
Q psy9819 99 GSYGNATTQEGCRK--------CDCNSHGNSV-----LGVCDSITGEC--ICQDNTQGKNCERCLPGYYGDPTDGGTCYY 163 (377)
Q Consensus 99 g~~g~~c~~~~C~~--------~~C~~~g~~~-----~g~C~~~~g~C--~C~~g~~G~~C~~C~~G~~g~~~~~~~C~~ 163 (377)
+. ..|....|.+ ..|..+.... ...|....+.| .|.....+..|. |++||.+. ++..|..
T Consensus 259 ~~--~~C~~g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~~~~~C~-C~~G~~~~--~~~~C~d 333 (699)
T 1n7d_A 259 NK--FKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECL-CPDGFQLV--AQRRCED 333 (699)
T ss_dssp TC--CCCTTSCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCTTCCCCC-CCSSSCCC--SSSCCCC
T ss_pred Cc--eecCCCcEeCCcccccccceecCcccccccccccccccccccCcCCCcccCCCCcEEe-CCCCeEcC--CCCcccC
Confidence 10 0111111110 1111110000 00122112223 244445556664 77777751 2335543
Q ss_pred --CCCCCCCCCCCCCCCCCCcc-cCCCCCccC
Q psy9819 164 --QCMARGMLTGPGPQGLGSGL-AERNAWEGK 192 (377)
Q Consensus 164 --~C~~~g~~~~~~~~~~g~~~-~c~~G~~G~ 192 (377)
+|...+.+...|.+..|+|. .|.+||++.
T Consensus 334 ideC~~~~~C~~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 334 IDECQDPDTCSQLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp CCCCSSSSSCTTTCCBCSSCBCCCCCSSCBCC
T ss_pred ccccCCCCccccccccCCCCeeeeeecccccC
Confidence 67655566778999999999 999999975
No 105
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=96.74 E-value=0.0012 Score=66.66 Aligned_cols=83 Identities=22% Similarity=0.556 Sum_probs=63.4
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC----------cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCC
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV----------PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~----------~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~ 265 (377)
...|.|.|.+ .++..|.|+|. .|++ .|..|++.||||.... .++++.+|+..
T Consensus 150 ~~~C~w~I~~-------~~g~~I~l~F~-~f~le~~~~~~~~~~C~~D~l~I~dg~~~~---------~~~~~~~CG~~- 211 (579)
T 2qqk_A 150 NLDCTFTILA-------KPKMEIILQFL-IFDLEHDPLQVGEGDCKYDWLDIWDGIPHV---------GPLIGKYCGTK- 211 (579)
T ss_dssp SCEEEEEEEC-------CTTEEEEEEEE-EEEC-------------CCEEEEESSSTTT---------SCEEEEECSSS-
T ss_pred CCeEEEEEEc-------CCCCEEEEEEE-EEEeecccccccCCCCCCEEEEEEeCCCCC---------CceeEEeCCCC-
Confidence 5689999999 56678998887 4443 4889999999986522 56788999875
Q ss_pred cCCCcceecCCCeeEeccCCCCCC--CCCcccccc
Q psy9819 266 HRGYEVLEAKSGVMTIHYKQGKPS--EGFNATYQI 298 (377)
Q Consensus 266 ~~~p~~c~~~sG~~~v~~~s~~c~--~GF~g~~~~ 298 (377)
.|..+.+.++.+.|.|.++... .||.+.|..
T Consensus 212 --~p~~i~S~~n~l~i~F~sd~~~~~~GF~~~y~~ 244 (579)
T 2qqk_A 212 --TPSELRSSTGILSLTFHTDMAVAKDGFSARYYL 244 (579)
T ss_dssp --CCCCEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred --CCCcEEeeCCeEEEEEeccccccccceEEEEEE
Confidence 3577889999999999998754 899997654
No 106
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=96.74 E-value=0.0018 Score=65.26 Aligned_cols=85 Identities=22% Similarity=0.518 Sum_probs=63.0
Q ss_pred CCccccccccccCCCCCCCCceeEEeecCCCCC---cCCCCceEeeCCCCccccccCcccCCCcccCCcCCCCcCCCcce
Q psy9819 196 SRECLWIIGQSLDSNSTAPADIILLRLQPDINV---PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVL 272 (377)
Q Consensus 196 ~~~C~w~i~~~~~~~~~~~~~~~~l~~~~~~~~---~C~~d~~~v~dG~~~~~~~~g~~~~~~~~g~~C~~~~~~~p~~c 272 (377)
...|.|.|.++. ....|.|+|...|++ .|..||+.|+||... .+++++.+|+.. .|..+
T Consensus 30 ~~~C~w~I~~p~------~~~~I~l~F~~~f~le~~~C~~D~l~i~dg~~~---------~~~~l~~~CG~~---~p~~i 91 (579)
T 2qqk_A 30 HQNCEWIVYAPE------PNQKIVLNFNPHFEIEKHDCKYDFIEIRDGDSE---------SADLLGKHCGNI---APPTI 91 (579)
T ss_dssp SCCEEEEEECSS------TTSEEEEEECSCCBCCCTTSSSSEEEEEESSST---------TSEEEEEECTTS---CCCCE
T ss_pred CCEEEEEEEECC------CCcEEEEEEecccccccCCCCeeEEEEEeCCCC---------CcceeeeECCCC---CCCCE
Confidence 567999999832 235788888634544 488999999998652 256788999875 45678
Q ss_pred ecCCCeeEeccCCCCCC--CCCcccccc
Q psy9819 273 EAKSGVMTIHYKQGKPS--EGFNATYQI 298 (377)
Q Consensus 273 ~~~sG~~~v~~~s~~c~--~GF~g~~~~ 298 (377)
.+.++.|.|.|.++... .||.+.|..
T Consensus 92 ~S~~n~l~v~F~Sd~~~~~~GF~~~y~~ 119 (579)
T 2qqk_A 92 ISSGSMLYIKFTSDYARQGAGFSLRYEI 119 (579)
T ss_dssp ECSSSEEEEEEECC---CCCBCEEEEEE
T ss_pred EecCCEEEEEEEECCCCCCCceEEEEEE
Confidence 88999999999998644 899997764
No 107
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.52 E-value=0.0013 Score=43.73 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=25.3
Q ss_pred eCCCCCCCCCCCCCeec--ccccCeeeecCCCeeC
Q psy9819 345 CDLLLTGVHITHGRTLH--YQVDLIRCTCRQVYLI 377 (377)
Q Consensus 345 C~~g~~G~~C~~g~~~~--~~~~~~~c~~~~~~~~ 377 (377)
|.+.+ ...|.||+||+ +.+++|+|+|++||++
T Consensus 6 C~~~~-~~pC~nGG~C~~~~~~~~~~C~C~~GytG 39 (53)
T 1nql_B 6 CPLSH-DGYCLHDGVCMYIEALDKYACNCVVGYIG 39 (53)
T ss_dssp CCSTT-CCEECTTCEEEEETTTTEEEEEECTTEES
T ss_pred cCCCC-CCCCCCCeEEeeecCCCCEEEecCCCCcC
Confidence 44433 35688999998 7888999999999975
No 108
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=96.44 E-value=0.0019 Score=42.25 Aligned_cols=29 Identities=28% Similarity=0.750 Sum_probs=24.4
Q ss_pred CCCCCCeecC---CCCeeeecCCCCccCCCCC
Q psy9819 36 NKCIYGYCKG---PPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 36 ~~C~~G~C~~---~~~~~C~C~~G~~G~~C~~ 64 (377)
+.|+||+|.- .+.+.|.|++||+|..|+.
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 14 QFCFHGTCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred CcccCCEEeeccCCCCeEEECCCCCcccCCCc
Confidence 4699999974 2478999999999999984
No 109
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.32 E-value=0.0013 Score=63.13 Aligned_cols=56 Identities=16% Similarity=0.435 Sum_probs=36.6
Q ss_pred CCCCCCeecCC----cccCCCCCC---CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCeeeecCCCee
Q psy9819 304 KCPENRTCINN----QCVCPPRRT---GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVYL 376 (377)
Q Consensus 304 ~C~~~g~C~~g----~C~C~~G~~---G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~c~~~~~~~ 376 (377)
++..+++|++. .|.|++||+ |..|+.. ++|... ..|.+ +|++..++|+|.|+.||+
T Consensus 7 ~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~di---deC~~~------------~~C~~--~C~n~~g~~~C~C~~g~~ 69 (400)
T 3p5b_L 7 NGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDI---DECQDP------------DTCSQ--LCVNLEGGYKCQCEEGFQ 69 (400)
T ss_dssp GGGCSSEEEECSSSEEEECCTTEEECSSSCEEEC---CCCSTT------------SSCSS--CCBCCSSSCBCCCCTTCC
T ss_pred CCCCCCEeECCCCCeEEECCCCCCcCCCCcccCc---hhhhcc------------CCCCC--ccCCCccceeeecccccc
Confidence 45556789654 799999998 7888632 333311 23443 677777777777777775
No 110
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.27 E-value=0.0026 Score=50.30 Aligned_cols=54 Identities=20% Similarity=0.479 Sum_probs=35.4
Q ss_pred CCCC-CeecCC---CCe-eeecCCCCccCCCCCCC--CCCCCceeecCCCcccCCCCCCCCCCCC
Q psy9819 37 KCIY-GYCKGP---PDY-SCQCELGWTGVDCSVNC--LCNNHSTCVHGIGICDECHDWTTGDHCQ 94 (377)
Q Consensus 37 ~C~~-G~C~~~---~~~-~C~C~~G~~G~~C~~~C--~C~~~g~C~~~~~~C~~C~~g~~G~~C~ 94 (377)
||+| |+|++. .++ +|.|++||+|..|+++- .|... .-..+++ .+...++|..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~~g---~G~~YrG-~~~~t~sG~~Cq 62 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEG---NGHFYRG-KASTDTMGRPCL 62 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSBCS---SCTTCCS-CCCBBTTSCBBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCccc---cccccee-eccccccCCccc
Confidence 6998 899764 456 99999999999999631 23211 0123455 466666666664
No 111
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.25 E-value=0.0004 Score=47.25 Aligned_cols=33 Identities=9% Similarity=0.225 Sum_probs=24.4
Q ss_pred eCCCCCCCCCCCCCeec--c--cccCeeeecCCCeeC
Q psy9819 345 CDLLLTGVHITHGRTLH--Y--QVDLIRCTCRQVYLI 377 (377)
Q Consensus 345 C~~g~~G~~C~~g~~~~--~--~~~~~~c~~~~~~~~ 377 (377)
|++.+.+..|.||+||+ + ..+.|+|+|++||++
T Consensus 7 C~~~~~~~pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G 43 (58)
T 3ltf_D 7 CPETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMG 43 (58)
T ss_dssp CCHHHHHHTSCSSCEEEEEEETTEEEEEEEECTTEES
T ss_pred CCccccCCcCCCCCEEeCCccCCCCCEEeECCCCCcc
Confidence 55555555788888888 4 567788888888874
No 112
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=96.15 E-value=0.004 Score=40.76 Aligned_cols=29 Identities=34% Similarity=0.786 Sum_probs=23.7
Q ss_pred CCCCCCeec---CCCCeeeecCCCCccCCCCC
Q psy9819 36 NKCIYGYCK---GPPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 36 ~~C~~G~C~---~~~~~~C~C~~G~~G~~C~~ 64 (377)
+.|+||+|. ..+.+.|.|++||+|..|+.
T Consensus 18 ~yC~nG~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIHGECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSSSEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCCCEEEEecCCCCeeEECCCCcccccccc
Confidence 578999997 23367899999999999984
No 113
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=96.13 E-value=0.0012 Score=59.94 Aligned_cols=52 Identities=19% Similarity=0.388 Sum_probs=40.8
Q ss_pred CCCCCeecCCcccCCCCCCCCCCCCC-----------CCCC-----CccCCC----ceEEeCCCC------CCCCCCC
Q psy9819 305 CPENRTCINNQCVCPPRRTGPDCQEE-----------ICPN-----ECHEFL----NHGTCDLLL------TGVHITH 356 (377)
Q Consensus 305 C~~~g~C~~g~C~C~~G~~G~~C~~~-----------~C~~-----~C~~~~----~~c~C~~g~------~G~~C~~ 356 (377)
|+++|+|.-|+|+|.+||+|..|+-. .|.. .|+.++ ++|.|.++| +|.+|+|
T Consensus 198 C~g~G~~~CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG~C~C~~~~~~~~~~~G~~~~~ 275 (280)
T 2p26_A 198 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCEH 275 (280)
T ss_dssp GGGSEEEETTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETTEEEECCCSSTTCEEESTTSCE
T ss_pred cCCCCeECCCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCCeeECcCCCCCCeeEeeEeccc
Confidence 88899999999999999999999831 4532 366652 788998875 6778885
No 114
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=96.11 E-value=0.0026 Score=41.70 Aligned_cols=29 Identities=34% Similarity=0.896 Sum_probs=23.7
Q ss_pred CCCCCCeec---CCCCeeeecCCCCccCCCCC
Q psy9819 36 NKCIYGYCK---GPPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 36 ~~C~~G~C~---~~~~~~C~C~~G~~G~~C~~ 64 (377)
+.|+||+|. ..+.+.|.|++||+|..|+.
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp TSCTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred CcccCCEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 569999995 23467899999999999984
No 115
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.08 E-value=0.0019 Score=49.92 Aligned_cols=76 Identities=18% Similarity=0.314 Sum_probs=24.3
Q ss_pred CCCCcccCCCCCCCccCC--CCCCCCCcCcccccCC--CcceecCCCCcc---CCCccCCCCccCCCCCCCCCCCCCCCC
Q psy9819 96 CRAGSYGNATTQEGCRKC--DCNSHGNSVLGVCDSI--TGECICQDNTQG---KNCERCLPGYYGDPTDGGTCYYQCMAR 168 (377)
Q Consensus 96 C~~g~~g~~c~~~~C~~~--~C~~~g~~~~g~C~~~--~g~C~C~~g~~G---~~C~~C~~G~~g~~~~~~~C~~~C~~~ 168 (377)
...+|++..|+.++|... .|. .+|... .+.|.|++||+| ..|+. .+ +|...
T Consensus 18 ~~~~~~~~~Cd~neC~~~~~~C~-------~~C~n~~g~y~C~C~~Gy~g~~g~~C~d-----------id----eC~~~ 75 (107)
T 2w2n_E 18 TENLYFQGAMGTNECLDNNGGCS-------YVCNDLKIGYECLCPDGFQLVAQRRCED-----------ID----ECQDP 75 (107)
T ss_dssp --CCCCSCCBSCCGGGTGGGGCS-------SEEECCSBSCEEECCTTCEEETTTEEEC----------------------
T ss_pred cCCCcCCCCCcCccCcCCCCCCC-------CEeEeCCCCeEEECCCCccccCCCcccc-----------cc----ccCCC
Confidence 345677776665666531 232 156442 358888888887 44531 11 33322
Q ss_pred CCCCCCCCCCCCCcc-cCCCCCccCC
Q psy9819 169 GMLTGPGPQGLGSGL-AERNAWEGKD 193 (377)
Q Consensus 169 g~~~~~~~~~~g~~~-~c~~G~~G~~ 193 (377)
..+...|.+..++|. .|++||++..
T Consensus 76 ~~C~~~C~n~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 76 DTCSQLCVNLEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp --------------------------
T ss_pred CCcCCeeecCCCCEEEECCCCceECC
Confidence 223357888888998 8999998764
No 116
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.98 E-value=0.0018 Score=61.78 Aligned_cols=62 Identities=26% Similarity=0.491 Sum_probs=11.4
Q ss_pred ccCCC-CCCCCCCeecCC----cccCCCCCC----CCCCCCCCCCCCccCCCceEEeCCCCCCCCCCCCCeecccccCee
Q psy9819 298 IFSCP-DKCPENRTCINN----QCVCPPRRT----GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIR 368 (377)
Q Consensus 298 ~~~C~-~~C~~~g~C~~g----~C~C~~G~~----G~~C~~~~C~~~C~~~~~~c~C~~g~~G~~C~~g~~~~~~~~~~~ 368 (377)
+++|. +++....+|.+. +|.|++||+ |..|+.. ++|.. ...|.++ |++..++|+
T Consensus 3 ~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~---~eC~~------------~~~C~~~--C~~~~g~~~ 65 (386)
T 3v65_B 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDV---NECAE------------EGYCSQG--CTNSEGAFQ 65 (386)
T ss_dssp ----------------------------------------------------------------CCTTE--EC-----CC
T ss_pred cCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCcc---ceeCC------------cCcccCc--CCCCCCCCe
Confidence 45562 333333477443 799999998 8889542 33431 1245543 777777788
Q ss_pred eecCCCee
Q psy9819 369 CTCRQVYL 376 (377)
Q Consensus 369 c~~~~~~~ 376 (377)
|.|+.||.
T Consensus 66 C~C~~g~~ 73 (386)
T 3v65_B 66 CWCEAGYE 73 (386)
T ss_dssp EECCTTEE
T ss_pred EEECCCce
Confidence 88877775
No 117
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=95.97 E-value=0.0035 Score=42.92 Aligned_cols=24 Identities=21% Similarity=0.163 Sum_probs=22.4
Q ss_pred CCCCC--CeecccccCeeeecCCCee
Q psy9819 353 HITHG--RTLHYQVDLIRCTCRQVYL 376 (377)
Q Consensus 353 ~C~~g--~~~~~~~~~~~c~~~~~~~ 376 (377)
.|.+| +||++.+++|+|+|++||+
T Consensus 18 PC~nga~gtC~~~~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 18 PCGPEAAGTCKETNSGYICRCNQGYR 43 (61)
T ss_dssp SSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred CCcCCCccccccCCCceEeECCCCCc
Confidence 48898 8999999999999999997
No 118
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.96 E-value=0.0026 Score=51.94 Aligned_cols=51 Identities=25% Similarity=0.553 Sum_probs=41.1
Q ss_pred CCCCCCeecCC-------cccCCCCCCCCCCCCCCCCCCccCC---CceEEeCCCCCCCCCC
Q psy9819 304 KCPENRTCINN-------QCVCPPRRTGPDCQEEICPNECHEF---LNHGTCDLLLTGVHIT 355 (377)
Q Consensus 304 ~C~~~g~C~~g-------~C~C~~G~~G~~C~~~~C~~~C~~~---~~~c~C~~g~~G~~C~ 355 (377)
+|+|+|+|+.. +|.|++||+|.+|+++.. ..|-.. .+++......+|..|.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~-~~C~~g~G~~YrG~~s~T~sG~~Cq 74 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-KTCYEGNGHFYRGKASTDTMGRPCL 74 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESS-CCEECTTCTTCCSCCCBBTTSCBCC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceecccc-ccCCCCCccccccceecCCcCCccc
Confidence 59999999543 699999999999998653 245543 5788888889999997
No 119
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=95.82 E-value=0.0053 Score=42.35 Aligned_cols=26 Identities=12% Similarity=0.238 Sum_probs=22.5
Q ss_pred CCCCCCCeecc-----cccCeeeecCCCeeC
Q psy9819 352 VHITHGRTLHY-----QVDLIRCTCRQVYLI 377 (377)
Q Consensus 352 ~~C~~g~~~~~-----~~~~~~c~~~~~~~~ 377 (377)
..|.||++|++ .+++|+|+|++||++
T Consensus 12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G 42 (63)
T 1hae_A 12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTG 42 (63)
T ss_dssp TTSCTTCEEEEEESSSSSCCEEEECCTTEES
T ss_pred CcCCCCcEEecCCccCCCCCEEEECCCCCcC
Confidence 35899999997 678999999999974
No 120
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=95.77 E-value=0.003 Score=45.35 Aligned_cols=34 Identities=35% Similarity=0.721 Sum_probs=25.9
Q ss_pred CCCcC----CCCCCCeecC---CCCeeeecCCCCccCCCCC
Q psy9819 31 ASLCY----NKCIYGYCKG---PPDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 31 ~~~C~----~~C~~G~C~~---~~~~~C~C~~G~~G~~C~~ 64 (377)
...|+ +.|+||+|.- ...+.|.|++||+|..|+.
T Consensus 37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCcccccccc
Confidence 35576 5899999953 2367899999999999974
No 121
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.51 E-value=0.027 Score=58.75 Aligned_cols=38 Identities=8% Similarity=0.079 Sum_probs=26.8
Q ss_pred CceEEeCCCCC---CCCCC----------CCCeecccccCeeeecCCCeeC
Q psy9819 340 LNHGTCDLLLT---GVHIT----------HGRTLHYQVDLIRCTCRQVYLI 377 (377)
Q Consensus 340 ~~~c~C~~g~~---G~~C~----------~g~~~~~~~~~~~c~~~~~~~~ 377 (377)
.+.|.|.+||. |..|+ .+.+|++.+++|+|.|++||.+
T Consensus 332 ~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 332 GYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp SEEEECCTTCEEETTTEEECCCCCSSSSSCTTTCCBCSSCBCCCCCSSEEC
T ss_pred CcccCCCCCCccCCCCccccCcccCCCCCCCCeeecCCCCceeecCCCCEe
Confidence 35566666663 44442 1348899999999999999964
No 122
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=94.37 E-value=0.0067 Score=61.45 Aligned_cols=41 Identities=12% Similarity=0.136 Sum_probs=37.4
Q ss_pred ccCCCCCCCCCCC-CCCCCCCccCC----CceEEeCCCCCCCCCCC
Q psy9819 316 CVCPPRRTGPDCQ-EEICPNECHEF----LNHGTCDLLLTGVHITH 356 (377)
Q Consensus 316 C~C~~G~~G~~C~-~~~C~~~C~~~----~~~c~C~~g~~G~~C~~ 356 (377)
-.|.+||+|++|. .+.||..|+.+ .++|+|.+||.|.+|+.
T Consensus 520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CCTTCCEEEEEEEEESCSSGGGGGSEEEETTEEEECTTEESTTSCE
T ss_pred CccCCCcccccccccCCCCcccCCCcEECCCCEeeCCCccCCCcCc
Confidence 4789999999999 58899999998 59999999999999984
No 123
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=94.35 E-value=0.014 Score=48.13 Aligned_cols=34 Identities=29% Similarity=0.794 Sum_probs=21.5
Q ss_pred CCCcC-CCCCC-CeecCCC-CeeeecCCCCccCCCCC
Q psy9819 31 ASLCY-NKCIY-GYCKGPP-DYSCQCELGWTGVDCSV 64 (377)
Q Consensus 31 ~~~C~-~~C~~-G~C~~~~-~~~C~C~~G~~G~~C~~ 64 (377)
.+.|. +||++ |+|.+.. +|+|.|++||+|..|+.
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~ 155 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEY 155 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCccccc
Confidence 33444 35665 6676533 67777777777777774
No 124
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=93.72 E-value=0.0099 Score=49.13 Aligned_cols=36 Identities=28% Similarity=0.722 Sum_probs=28.6
Q ss_pred cccccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCC
Q psy9819 295 TYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEE 330 (377)
Q Consensus 295 ~~~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~ 330 (377)
.++...| +++|.++|+|+++ +|.|++||+|.+||..
T Consensus 116 ICe~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 116 LCYTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp EEEECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred EEEeCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 3445566 4569999999665 7999999999999975
No 125
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.57 E-value=0.18 Score=52.56 Aligned_cols=29 Identities=7% Similarity=-0.023 Sum_probs=22.4
Q ss_pred CCCCCCCCCCCCCCCCCCcc-cCCCCCccC
Q psy9819 164 QCMARGMLTGPGPQGLGSGL-AERNAWEGK 192 (377)
Q Consensus 164 ~C~~~g~~~~~~~~~~g~~~-~c~~G~~G~ 192 (377)
+|...+.+...|.+..|+|. .|.+||+..
T Consensus 354 eC~~~~~C~~~C~n~~gsy~C~C~~Gy~l~ 383 (791)
T 3m0c_C 354 ECQDPDTCSQLCVNLEGGYKCQCEEGFQLD 383 (791)
T ss_dssp CCSSSSSCTTTCCBCSSCBCCCCCSSEECC
T ss_pred ccCCCCCCCCeeecCCCCceeecCCCCEeC
Confidence 55544556678889999999 999999864
No 126
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=93.18 E-value=0.068 Score=34.82 Aligned_cols=26 Identities=27% Similarity=0.715 Sum_probs=20.4
Q ss_pred CCCCCCCeec--CC----cccCCCCCCCCCCCC
Q psy9819 303 DKCPENRTCI--NN----QCVCPPRRTGPDCQE 329 (377)
Q Consensus 303 ~~C~~~g~C~--~g----~C~C~~G~~G~~C~~ 329 (377)
+.|.| |+|. .. .|+|++||+|.+||.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 34886 6994 33 699999999999985
No 127
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.13 E-value=0.038 Score=55.28 Aligned_cols=32 Identities=34% Similarity=0.932 Sum_probs=26.6
Q ss_pred CcC-CCCCC-CeecC--CCCeeeecC-CCCccCCCCC
Q psy9819 33 LCY-NKCIY-GYCKG--PPDYSCQCE-LGWTGVDCSV 64 (377)
Q Consensus 33 ~C~-~~C~~-G~C~~--~~~~~C~C~-~G~~G~~C~~ 64 (377)
.|. +||+| |+|+. .++|.|.|+ +||+|..|+.
T Consensus 3 ~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp TTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 354 79998 79994 358999999 9999999995
No 128
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=93.13 E-value=0.028 Score=46.44 Aligned_cols=39 Identities=31% Similarity=0.640 Sum_probs=27.4
Q ss_pred ccccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCCC-CCC
Q psy9819 296 YQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEI-CPN 334 (377)
Q Consensus 296 ~~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~~-C~~ 334 (377)
++...| ++.|+++|+|.+. .|.|++||+|..||... ||+
T Consensus 117 Ce~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~~~c~~ 161 (164)
T 3cfw_A 117 CYTASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFVQVDPR 161 (164)
T ss_dssp EEECCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCBC-----
T ss_pred EccCCCCCCcCCCCCeecccCCCceeeeCCCcccccccccccCcc
Confidence 344455 3569999999643 79999999999999653 553
No 129
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.02 E-value=0.037 Score=55.17 Aligned_cols=32 Identities=31% Similarity=0.950 Sum_probs=27.0
Q ss_pred CcC-CCCCC-CeecC--CCCeeeecC-CCCccCCCCC
Q psy9819 33 LCY-NKCIY-GYCKG--PPDYSCQCE-LGWTGVDCSV 64 (377)
Q Consensus 33 ~C~-~~C~~-G~C~~--~~~~~C~C~-~G~~G~~C~~ 64 (377)
.|. +||+| |+|.+ .++|+|.|+ +||+|.+|++
T Consensus 4 ~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp GGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred cCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 454 79998 89986 348999999 9999999995
No 130
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=92.44 E-value=0.031 Score=55.72 Aligned_cols=32 Identities=28% Similarity=0.779 Sum_probs=27.3
Q ss_pred cCC-CCCCCCCCeecC-C----cccCC-CCCCCCCCCCC
Q psy9819 299 FSC-PDKCPENRTCIN-N----QCVCP-PRRTGPDCQEE 330 (377)
Q Consensus 299 ~~C-~~~C~~~g~C~~-g----~C~C~-~G~~G~~C~~~ 330 (377)
++| +++|+|+|+|++ + .|.|+ +||+|.+||+.
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 456 467999999977 4 79999 99999999974
No 131
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=91.94 E-value=0.061 Score=35.24 Aligned_cols=23 Identities=30% Similarity=0.440 Sum_probs=20.1
Q ss_pred CCCCCCCeecccccCeeeecCCCee
Q psy9819 352 VHITHGRTLHYQVDLIRCTCRQVYL 376 (377)
Q Consensus 352 ~~C~~g~~~~~~~~~~~c~~~~~~~ 376 (377)
..|.+ +|++.+++|+|.|++||+
T Consensus 20 ~~C~~--~C~n~~Gsy~C~C~~Gy~ 42 (53)
T 1apq_A 20 PQCQH--LCHNYVGGYFCSCRPGYE 42 (53)
T ss_dssp CTTSS--EEEEETTEEEEECSTTCE
T ss_pred CCCCC--EeECCCCCeEEECCCCCe
Confidence 35764 999999999999999996
No 132
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=91.82 E-value=0.071 Score=43.28 Aligned_cols=28 Identities=25% Similarity=0.819 Sum_probs=23.2
Q ss_pred CCCC-CeecCC---CCe-eeecCCCCccCCCCC
Q psy9819 37 KCIY-GYCKGP---PDY-SCQCELGWTGVDCSV 64 (377)
Q Consensus 37 ~C~~-G~C~~~---~~~-~C~C~~G~~G~~C~~ 64 (377)
||+| |+|+.. ..+ +|.|++||.|..|++
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei 46 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 46 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceec
Confidence 6998 889754 345 899999999999986
No 133
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=91.58 E-value=0.1 Score=49.77 Aligned_cols=48 Identities=29% Similarity=0.719 Sum_probs=31.4
Q ss_pred CeecC-CCCeeeecCCCCc---cCCCCC--CC----CCCCCceee--cCCCcccCCCCCCCCC
Q psy9819 41 GYCKG-PPDYSCQCELGWT---GVDCSV--NC----LCNNHSTCV--HGIGICDECHDWTTGD 91 (377)
Q Consensus 41 G~C~~-~~~~~C~C~~G~~---G~~C~~--~C----~C~~~g~C~--~~~~~C~~C~~g~~G~ 91 (377)
++|++ +++|+|.|++||+ |..|+. +| +|.+ +|. .+++.| .|.+||.+.
T Consensus 12 ~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~--~C~n~~g~~~C-~C~~g~~~~ 71 (400)
T 3p5b_L 12 HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ--LCVNLEGGYKC-QCEEGFQLD 71 (400)
T ss_dssp SEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSS--CCBCCSSSCBC-CCCTTCCCC
T ss_pred CEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCC--ccCCCccceee-ecccccccc
Confidence 58886 4589999999999 777763 23 2322 454 345667 566666543
No 134
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=91.34 E-value=0.032 Score=45.66 Aligned_cols=36 Identities=22% Similarity=0.695 Sum_probs=28.2
Q ss_pred cccccCC-CCCCCCCCeecCC----cccCCCCCCCCCCCCC
Q psy9819 295 TYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEE 330 (377)
Q Consensus 295 ~~~~~~C-~~~C~~~g~C~~g----~C~C~~G~~G~~C~~~ 330 (377)
-++...| .++|.++|+|.++ .|.|.+||+|.+||+.
T Consensus 116 ICe~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 116 LCYTAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp EEEECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred EeCcCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 3445566 3569999999766 7999999999999875
No 135
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=91.25 E-value=0.022 Score=53.52 Aligned_cols=35 Identities=29% Similarity=0.728 Sum_probs=30.0
Q ss_pred cccccCCCCCCCCCCeecCCcccCCCCCCCCC--CCC
Q psy9819 295 TYQIFSCPDKCPENRTCINNQCVCPPRRTGPD--CQE 329 (377)
Q Consensus 295 ~~~~~~C~~~C~~~g~C~~g~C~C~~G~~G~~--C~~ 329 (377)
-|-...|++.|++||.|+.++|.|.+||.|.+ |..
T Consensus 188 vyIg~~Cp~~CsGhG~C~~g~C~Cd~G~~g~d~~C~~ 224 (387)
T 2ddu_A 188 VYISEPCPSYCSGHGDCISGVCFCDLGYTAAQGTCVS 224 (387)
T ss_dssp CEEESCCGGGGGGSEEEETTEEEECTTEEEETTEEEE
T ss_pred EEecccCccccCCCceecCCeEEecCCcccCCCcccc
Confidence 34456799999999999999999999999976 764
No 136
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=91.22 E-value=0.1 Score=33.97 Aligned_cols=15 Identities=20% Similarity=0.328 Sum_probs=7.1
Q ss_pred eEEeCCCCCCCCCCC
Q psy9819 342 HGTCDLLLTGVHITH 356 (377)
Q Consensus 342 ~c~C~~g~~G~~C~~ 356 (377)
.|.|.+||+|.+|++
T Consensus 31 ~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 31 ACVCHSGYVGARCEH 45 (50)
T ss_pred EEECCCCCcccCCCc
Confidence 344444444444443
No 137
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=91.13 E-value=0.054 Score=54.19 Aligned_cols=32 Identities=22% Similarity=0.754 Sum_probs=26.9
Q ss_pred cCC-CCCCCCCCeecC-C----cccCC-CCCCCCCCCCC
Q psy9819 299 FSC-PDKCPENRTCIN-N----QCVCP-PRRTGPDCQEE 330 (377)
Q Consensus 299 ~~C-~~~C~~~g~C~~-g----~C~C~-~G~~G~~C~~~ 330 (377)
++| +++|.|+|+|++ + .|.|+ +||+|.+||.+
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence 567 567999999973 2 79999 99999999974
No 138
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=90.92 E-value=0.037 Score=52.54 Aligned_cols=53 Identities=26% Similarity=0.736 Sum_probs=14.2
Q ss_pred CCCCeecCCC-CeeeecCCCCc----cCCCCC--CC----CCCCCceee--cCCCcccCCCCCCC----CCCCC
Q psy9819 38 CIYGYCKGPP-DYSCQCELGWT----GVDCSV--NC----LCNNHSTCV--HGIGICDECHDWTT----GDHCQ 94 (377)
Q Consensus 38 C~~G~C~~~~-~~~C~C~~G~~----G~~C~~--~C----~C~~~g~C~--~~~~~C~~C~~g~~----G~~C~ 94 (377)
|.| +|.++. +|+|.|++||+ |..|+. +| +|.+ .|. .+++.| .|.+||. |..|+
T Consensus 13 c~~-~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~--~C~~~~g~~~C-~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 13 CAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQ--GCTNSEGAFQC-WCEAGYELRPDRRSCK 82 (386)
T ss_dssp ----------------------------------------CCTT--EEC-----CCE-ECCTTEEECTTSSCEE
T ss_pred CCC-CCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccC--cCCCCCCCCeE-EECCCceEcCCCCeEC
Confidence 554 787544 69999999999 888963 34 3432 265 456788 6888887 66664
No 139
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=90.34 E-value=0.089 Score=48.67 Aligned_cols=42 Identities=31% Similarity=0.608 Sum_probs=34.4
Q ss_pred CCCCCCCc-eeecCC--CcccCCCCCCCCCCCCCCCCCcccCCCCC
Q psy9819 65 NCLCNNHS-TCVHGI--GICDECHDWTTGDHCQYCRAGSYGNATTQ 107 (377)
Q Consensus 65 ~C~C~~~g-~C~~~~--~~C~~C~~g~~G~~C~~C~~g~~g~~c~~ 107 (377)
.|.|++|+ .|...+ ++| .|.++++|.+||.|.++|.+.....
T Consensus 269 ~C~CnGHA~~C~~~~g~~~C-~C~HnT~G~~Ce~C~p~y~~~pw~p 313 (338)
T 3tbd_A 269 RCKCNLHANLCSMREGSLQC-ECEHNTTGPDCGKCKKNFRTRSWRA 313 (338)
T ss_dssp EECCTTBCSCEEEETTEEEE-CCCTTEESTTSCEECTTCBSSCCCC
T ss_pred cccccCCcCccCCCCCCcee-cCCCCCCCCCCcccCccccCCCCCC
Confidence 46788887 688544 469 8999999999999999999886553
No 140
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=90.00 E-value=0.17 Score=36.19 Aligned_cols=24 Identities=21% Similarity=0.409 Sum_probs=12.8
Q ss_pred CCCCCCCeec--ccccCeeeecCCCee
Q psy9819 352 VHITHGRTLH--YQVDLIRCTCRQVYL 376 (377)
Q Consensus 352 ~~C~~g~~~~--~~~~~~~c~~~~~~~ 376 (377)
.+|.|| +|+ ...+.+.|+|..+|+
T Consensus 46 ~yClnG-~C~~i~~~~~~~C~C~~GYt 71 (79)
T 1xdt_R 46 DFCIHG-ECKYVKELRAPSCICHPGYH 71 (79)
T ss_dssp TCCSSE-EECCBGGGTBCCEEECTTEE
T ss_pred CcCCCC-EeeeecCCCCeEEEcCCCcc
Confidence 455565 553 333455666666665
No 141
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=89.94 E-value=0.13 Score=34.11 Aligned_cols=21 Identities=19% Similarity=0.472 Sum_probs=18.4
Q ss_pred CCCCCeecccccCeeeecCCCee
Q psy9819 354 ITHGRTLHYQVDLIRCTCRQVYL 376 (377)
Q Consensus 354 C~~g~~~~~~~~~~~c~~~~~~~ 376 (377)
|++ .|++.+++|+|.|++||.
T Consensus 11 C~~--~C~nt~Gsy~C~C~~Gy~ 31 (55)
T 2jkh_L 11 CDQ--FCHEEQNSVVCSCARGYT 31 (55)
T ss_dssp CSS--EEEEETTEEEEECCTTEE
T ss_pred cCc--EeEcCCCCeEEeCCCCCE
Confidence 665 899999999999999995
No 142
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=89.79 E-value=0.19 Score=32.65 Aligned_cols=31 Identities=13% Similarity=0.223 Sum_probs=19.2
Q ss_pred eCCCCCCCCCCCCCeec--ccccCeeeecCCCeeC
Q psy9819 345 CDLLLTGVHITHGRTLH--YQVDLIRCTCRQVYLI 377 (377)
Q Consensus 345 C~~g~~G~~C~~g~~~~--~~~~~~~c~~~~~~~~ 377 (377)
|++.+. .+|.| ++|. ...+.+.|+|+.+|++
T Consensus 8 C~~~~~-~yC~n-G~C~~~~~~~~~~C~C~~gy~G 40 (50)
T 1iox_A 8 CPKQYK-HYCIK-GRCRFVVAEQTPSCVCDEGYIG 40 (50)
T ss_dssp CCGGGT-TSCTT-CCEEEETTTTEEEECCCTTEET
T ss_pred cChhhc-CcccC-CEEEeEcCCCCeEEECCCCccc
Confidence 455554 66777 4665 4455677777777764
No 143
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=89.33 E-value=0.18 Score=41.47 Aligned_cols=28 Identities=32% Similarity=0.987 Sum_probs=14.4
Q ss_pred CCC-CCeecCC-CCeeeecCCCCccCCCCC
Q psy9819 37 KCI-YGYCKGP-PDYSCQCELGWTGVDCSV 64 (377)
Q Consensus 37 ~C~-~G~C~~~-~~~~C~C~~G~~G~~C~~ 64 (377)
+|+ +|+|... .+|+|.|++||+|..|+.
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 126 SCSGHGECVEIINNYTCNCDVGYYGPQCQF 155 (164)
T ss_dssp SSCSSEEEEEETTEEEEEECTTCBSSSSCB
T ss_pred cCCCCCeecccCCCceeeeCCCcccccccc
Confidence 454 3555532 245566666666655553
No 144
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=89.24 E-value=0.17 Score=32.95 Aligned_cols=24 Identities=25% Similarity=0.670 Sum_probs=18.9
Q ss_pred CCCCCCeecC-CCCeeeecCCCCccC
Q psy9819 36 NKCIYGYCKG-PPDYSCQCELGWTGV 60 (377)
Q Consensus 36 ~~C~~G~C~~-~~~~~C~C~~G~~G~ 60 (377)
.+|+| +|++ +++|+|.|++||++.
T Consensus 20 ~~C~~-~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 20 PQCQH-LCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp CTTSS-EEEEETTEEEEECSTTCEEC
T ss_pred CCCCC-EeECCCCCeEEECCCCCeEC
Confidence 35764 8986 458999999999963
No 145
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=87.94 E-value=0.14 Score=33.35 Aligned_cols=22 Identities=18% Similarity=0.448 Sum_probs=18.2
Q ss_pred CCCCCCeecccccCeeeecCCCee
Q psy9819 353 HITHGRTLHYQVDLIRCTCRQVYL 376 (377)
Q Consensus 353 ~C~~g~~~~~~~~~~~c~~~~~~~ 376 (377)
.|++ .|++.+++|+|.|++||.
T Consensus 7 ~C~~--~C~n~~gs~~C~C~~Gy~ 28 (51)
T 1kig_L 7 GCDQ--FCREERSEVRCSCAHGYV 28 (51)
T ss_dssp SSSS--CCCEETTEECCCCCTTEE
T ss_pred CcCC--EeEcCCCCeEEeCCCCcE
Confidence 3665 688999999999999985
No 146
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=86.85 E-value=0.2 Score=45.20 Aligned_cols=67 Identities=30% Similarity=0.807 Sum_probs=37.3
Q ss_pred CCCCceeecCCCcccCCCCCCCCCCCCCCCCCcccCCCCCCCccC----CCCCCCCCcCcccccCCCcceecCCCC----
Q psy9819 68 CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRK----CDCNSHGNSVLGVCDSITGECICQDNT---- 139 (377)
Q Consensus 68 C~~~g~C~~~~~~C~~C~~g~~G~~C~~C~~g~~g~~c~~~~C~~----~~C~~~g~~~~g~C~~~~g~C~C~~g~---- 139 (377)
|+++|+|.- ++| .|.+||.|..|+ |+..-....-....|.. ..|+++| .|. -|+|.|.+.|
T Consensus 198 C~g~G~~~C--G~C-~C~~g~~G~~Ce-C~~~~~~~~~~~~~C~~~~~~~~CSgrG-----~C~--CG~C~C~~~~~~~~ 266 (280)
T 2p26_A 198 CHGKGFLEC--GIC-RCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLG-----DCV--CGQCLCHTSDVPGK 266 (280)
T ss_dssp GGGSEEEET--TEE-EECTTEESTTSC-EECTTSCHHHHHHTTCSSTTSCGGGGSE-----EEE--TTEEEECCCSSTTC
T ss_pred cCCCCeECC--Cce-eCCCCCcCCcce-ecCCccccccccccCCCCCCCCccCCCc-----eEe--CCeeECcCCCCCCe
Confidence 556666653 678 788999999885 44321100000002332 1366655 665 5789997775
Q ss_pred --ccCCCc
Q psy9819 140 --QGKNCE 145 (377)
Q Consensus 140 --~G~~C~ 145 (377)
.|.+|+
T Consensus 267 ~~~G~~~~ 274 (280)
T 2p26_A 267 LIYGQYCE 274 (280)
T ss_dssp EEESTTSC
T ss_pred eEeeEecc
Confidence 455554
No 147
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=86.36 E-value=0.21 Score=49.52 Aligned_cols=67 Identities=21% Similarity=0.479 Sum_probs=46.8
Q ss_pred CCCCceeecCCCcccCCCCCCC--CCCCCCCCCCcccCCCCCCCccCCCCCCCCCcCcccccCCCcceecCCCCcc
Q psy9819 68 CNNHSTCVHGIGICDECHDWTT--GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141 (377)
Q Consensus 68 C~~~g~C~~~~~~C~~C~~g~~--G~~C~~C~~g~~g~~c~~~~C~~~~C~~~g~~~~g~C~~~~g~C~C~~g~~G 141 (377)
|+..|....-.|.| .|.+||. +..|+.|++||+........|.+|+-+... -......|.|..+|.-
T Consensus 252 C~~dG~w~~p~G~C-~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~s------~~~Gs~~C~C~ng~~r 320 (536)
T 3fl7_A 252 CAVDGEWLVPIGQC-LCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLP------SPEGATSCECEEGFFR 320 (536)
T ss_dssp ECTTSCBCCCBCCC-EECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEEC------CCTTCSSCEECTTCBC
T ss_pred EcCCCCEecccCcE-eccCccccCCceeeecCCCCCcccCCCCccccCCCCCCC------CCCCccEEEEeccccc
Confidence 55566665557899 7999997 677889999999887666778765543221 1122458888888753
No 148
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=85.80 E-value=0.19 Score=40.82 Aligned_cols=27 Identities=33% Similarity=1.035 Sum_probs=14.8
Q ss_pred CCCC-CeecC-CCCeeeecCCCCccCCCC
Q psy9819 37 KCIY-GYCKG-PPDYSCQCELGWTGVDCS 63 (377)
Q Consensus 37 ~C~~-G~C~~-~~~~~C~C~~G~~G~~C~ 63 (377)
||++ |+|.+ ...|.|.|.+||+|..|+
T Consensus 126 pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce 154 (157)
T 1g1t_A 126 SCSGHGECVETINNYTCKCDPGFSGLKCE 154 (157)
T ss_dssp GGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred CCCCCCEeecCCCCeeEECCCCccCcccc
Confidence 4543 55643 225566666666666665
No 149
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=85.43 E-value=0.33 Score=34.02 Aligned_cols=18 Identities=6% Similarity=-0.138 Sum_probs=15.1
Q ss_pred CCCCCCeecccccCeeee
Q psy9819 353 HITHGRTLHYQVDLIRCT 370 (377)
Q Consensus 353 ~C~~g~~~~~~~~~~~c~ 370 (377)
.|.++++|+|.+++|+|.
T Consensus 12 ~C~~~~~C~Nt~Gsy~C~ 29 (71)
T 2kl7_A 12 ACKGEMKCINHYGGYLCL 29 (71)
T ss_dssp SCTTEEEEEETTCCEEEE
T ss_pred CCCCCCEeECCCCCeEec
Confidence 577778888889999988
No 150
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=85.31 E-value=0.37 Score=31.61 Aligned_cols=21 Identities=14% Similarity=0.283 Sum_probs=17.3
Q ss_pred CCCCCeeccccc-CeeeecCCCee
Q psy9819 354 ITHGRTLHYQVD-LIRCTCRQVYL 376 (377)
Q Consensus 354 C~~g~~~~~~~~-~~~c~~~~~~~ 376 (377)
|++ .|++.++ +|+|.|++||.
T Consensus 9 C~~--~C~n~~ggs~~C~C~~Gy~ 30 (53)
T 2bz6_L 9 CEQ--YCSDHTGTKRSCRCHEGYS 30 (53)
T ss_dssp CSS--EEEEETTTEEEEECCTTEE
T ss_pred cCC--EeEcCCCCCEEeeCCCCCE
Confidence 666 6888888 79999999985
No 151
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=82.60 E-value=0.65 Score=31.18 Aligned_cols=21 Identities=14% Similarity=0.403 Sum_probs=15.5
Q ss_pred CCCCCeecccc-cCeeeecCCCee
Q psy9819 354 ITHGRTLHYQV-DLIRCTCRQVYL 376 (377)
Q Consensus 354 C~~g~~~~~~~-~~~~c~~~~~~~ 376 (377)
|+| .|++.+ ++|+|.|++||.
T Consensus 9 C~~--~C~n~~~gs~~C~C~~Gy~ 30 (59)
T 2wph_E 9 CEQ--FCKNSADNKVVCSCTEGYR 30 (59)
T ss_dssp CSS--EEEECSTTCEEEECCTTEE
T ss_pred cCC--EeEeCCCCCEEeeCCCCcE
Confidence 555 677777 488888888875
No 152
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=81.76 E-value=0.56 Score=44.00 Aligned_cols=29 Identities=34% Similarity=0.813 Sum_probs=23.4
Q ss_pred CCcCCCC-CCCeecCCCCeeeecCCCCccCC--CC
Q psy9819 32 SLCYNKC-IYGYCKGPPDYSCQCELGWTGVD--CS 63 (377)
Q Consensus 32 ~~C~~~C-~~G~C~~~~~~~C~C~~G~~G~~--C~ 63 (377)
+.||+.| .||.|+. .+|.|++||.|.+ |.
T Consensus 192 ~~Cp~~CsGhG~C~~---g~C~Cd~G~~g~d~~C~ 223 (387)
T 2ddu_A 192 EPCPSYCSGHGDCIS---GVCFCDLGYTAAQGTCV 223 (387)
T ss_dssp SCCGGGGGGSEEEET---TEEEECTTEEEETTEEE
T ss_pred ccCccccCCCceecC---CeEEecCCcccCCCccc
Confidence 4699999 4899984 4899999999964 55
No 153
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=81.34 E-value=0.64 Score=32.34 Aligned_cols=21 Identities=14% Similarity=0.283 Sum_probs=17.5
Q ss_pred CCCCCeeccccc-CeeeecCCCee
Q psy9819 354 ITHGRTLHYQVD-LIRCTCRQVYL 376 (377)
Q Consensus 354 C~~g~~~~~~~~-~~~c~~~~~~~ 376 (377)
|++ .|++.++ +|+|.|++||.
T Consensus 15 C~h--~C~n~~g~s~~C~C~~Gy~ 36 (69)
T 1kli_L 15 CEQ--YCSDHTGTKRSCRCHEGYS 36 (69)
T ss_dssp CSS--EEEEETTTEEEEECCTTEE
T ss_pred cCC--EeEcCCCCCEEEeCCCCCe
Confidence 566 7888888 79999999985
No 154
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=77.23 E-value=0.85 Score=36.66 Aligned_cols=49 Identities=16% Similarity=0.466 Sum_probs=24.3
Q ss_pred CCCCCCCCcccCCCCC-CCccCCC-CCCCCCcCcccccCC-CcceecCCCCc
Q psy9819 92 HCQYCRAGSYGNATTQ-EGCRKCD-CNSHGNSVLGVCDSI-TGECICQDNTQ 140 (377)
Q Consensus 92 ~C~~C~~g~~g~~c~~-~~C~~~~-C~~~g~~~~g~C~~~-~g~C~C~~g~~ 140 (377)
.|+.|++|+|-+.... ..|.++. |...+......|... +.+|.|++||.
T Consensus 37 ~C~pC~~gty~~~~n~~~~C~~C~~C~~~~~~~~~~Ct~t~dtvC~C~~G~y 88 (142)
T 2uwi_A 37 ICGHCPSDTFTSIYNRSPWCHSCRGPCGTNRVEVTPCTPTTNRICHCDSNSY 88 (142)
T ss_dssp EEEECCTTEECCSSBCCSSCEECCCCCCTTEEEEECCBTTBCCEEEECTTEE
T ss_pred ccCcCCCCCCcccCCCCCccCCCcCcccCCeeEeecCCCCCCCEeeCCCCcE
Confidence 3445666665544322 3455543 433222211245432 34888888875
No 155
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=76.58 E-value=1.2 Score=42.46 Aligned_cols=29 Identities=28% Similarity=0.798 Sum_probs=18.8
Q ss_pred CCCCC-CeecCCC-CeeeecCC-CCccCCCCC
Q psy9819 36 NKCIY-GYCKGPP-DYSCQCEL-GWTGVDCSV 64 (377)
Q Consensus 36 ~~C~~-G~C~~~~-~~~C~C~~-G~~G~~C~~ 64 (377)
+||+| |+|.... .|.|.|+. +|+|+.|+.
T Consensus 191 ~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 191 DSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp TSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred ccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 46766 6676432 66777774 777777764
No 156
>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R
Probab=74.46 E-value=1.4 Score=35.55 Aligned_cols=63 Identities=30% Similarity=0.834 Sum_probs=31.3
Q ss_pred CCCCCCCCcccCCCCCCCccCCC-CCCC-CCcCcccccCC-CcceecCCCCc-------cCCCccCCCCccCC
Q psy9819 92 HCQYCRAGSYGNATTQEGCRKCD-CNSH-GNSVLGVCDSI-TGECICQDNTQ-------GKNCERCLPGYYGD 154 (377)
Q Consensus 92 ~C~~C~~g~~g~~c~~~~C~~~~-C~~~-g~~~~g~C~~~-~g~C~C~~g~~-------G~~C~~C~~G~~g~ 154 (377)
.|..|++|+|-+.-....|+++. |... +......|... +-+|.|++||. +..|..|++|+|.+
T Consensus 39 ~C~~C~~gty~~~~~~~~C~~C~~C~~~~g~~~~~~Ct~t~dt~C~C~~G~y~~~g~~~~~~C~~C~~Gtfs~ 111 (146)
T 2hey_R 39 VCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSP 111 (146)
T ss_dssp EEEECCTTEECCSCBSSCCEECCCCCGGGTEEEEECCBTTBCCEEEECTTEEESCSSSTTSSEEECCTTEECC
T ss_pred CcccCCCCCEECCCCCCcCcccCCCCCCCCceEeccCccCCCccccCCCCeeeCCCcccCcccccCCCCcccC
Confidence 34456666554443333455433 4332 21111134332 34788988863 23566777777654
No 157
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=72.60 E-value=1.4 Score=41.94 Aligned_cols=32 Identities=28% Similarity=0.878 Sum_probs=25.6
Q ss_pred cCC-CCCCCCCCeecCC----cccCCC-CCCCCCCCCC
Q psy9819 299 FSC-PDKCPENRTCINN----QCVCPP-RRTGPDCQEE 330 (377)
Q Consensus 299 ~~C-~~~C~~~g~C~~g----~C~C~~-G~~G~~C~~~ 330 (377)
+.| .++|.++|+|++. .|.|+. +|+|..|+.+
T Consensus 186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 456 4679999999654 799996 9999999864
No 158
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=72.38 E-value=1.2 Score=41.17 Aligned_cols=39 Identities=33% Similarity=0.893 Sum_probs=30.5
Q ss_pred CCCCCCCCcCcccccCCC--cceecCCCCccCCCccCCCCccCCC
Q psy9819 113 CDCNSHGNSVLGVCDSIT--GECICQDNTQGKNCERCLPGYYGDP 155 (377)
Q Consensus 113 ~~C~~~g~~~~g~C~~~~--g~C~C~~g~~G~~C~~C~~G~~g~~ 155 (377)
|.|++|.. .|.... +.|.|.....|..|++|.++|++.+
T Consensus 270 C~CnGHA~----~C~~~~g~~~C~C~HnT~G~~Ce~C~p~y~~~p 310 (338)
T 3tbd_A 270 CKCNLHAN----LCSMREGSLQCECEHNTTGPDCGKCKKNFRTRS 310 (338)
T ss_dssp ECCTTBCS----CEEEETTEEEECCCTTEESTTSCEECTTCBSSC
T ss_pred ccccCCcC----ccCCCCCCceecCCCCCCCCCCcccCccccCCC
Confidence 45666653 565433 4799999999999999999999875
No 159
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=66.82 E-value=1.8 Score=41.78 Aligned_cols=25 Identities=32% Similarity=0.741 Sum_probs=16.7
Q ss_pred CCC-CCCeecCCcccCCCCCCCCCCC
Q psy9819 304 KCP-ENRTCINNQCVCPPRRTGPDCQ 328 (377)
Q Consensus 304 ~C~-~~g~C~~g~C~C~~G~~G~~C~ 328 (377)
.|+ ++|+-.-|.|.|.+||.|..||
T Consensus 447 ~C~~g~G~~~CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 447 RCNNGNGTFECGVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTEEEETTEEEECTTC------
T ss_pred ccCCCCeeEeCCceECcCCCCCCCCC
Confidence 387 7888888999999999999986
No 160
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=63.23 E-value=3 Score=45.72 Aligned_cols=31 Identities=29% Similarity=0.956 Sum_probs=24.7
Q ss_pred CC-CCCCCCCCeecCC----cccCC-CCCCCCCCCCC
Q psy9819 300 SC-PDKCPENRTCINN----QCVCP-PRRTGPDCQEE 330 (377)
Q Consensus 300 ~C-~~~C~~~g~C~~g----~C~C~-~G~~G~~C~~~ 330 (377)
.| .++|.|+|+|+.. .|.|+ +||+|..|+++
T Consensus 1019 ~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1019 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp CCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred ceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 45 4569999999643 79999 69999999875
No 161
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=62.02 E-value=4.8 Score=32.87 Aligned_cols=22 Identities=27% Similarity=0.615 Sum_probs=19.2
Q ss_pred CCCCCCeecccccCeeeecCCCee
Q psy9819 353 HITHGRTLHYQVDLIRCTCRQVYL 376 (377)
Q Consensus 353 ~C~~g~~~~~~~~~~~c~~~~~~~ 376 (377)
.|.+ +|++.+++|+|.|++||.
T Consensus 136 ~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 136 TCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp SSSS--EEEEETTEEEEECCTTEE
T ss_pred ccCC--ccccCCCCEEEeCCCCcE
Confidence 3776 799999999999999996
No 162
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=61.21 E-value=3.8 Score=44.91 Aligned_cols=32 Identities=34% Similarity=0.959 Sum_probs=25.8
Q ss_pred CcC-CCCCC-CeecCC-CCeeeecC-CCCccCCCCC
Q psy9819 33 LCY-NKCIY-GYCKGP-PDYSCQCE-LGWTGVDCSV 64 (377)
Q Consensus 33 ~C~-~~C~~-G~C~~~-~~~~C~C~-~G~~G~~C~~ 64 (377)
.|. +||+| |+|... ..|.|.|+ +||+|..|+.
T Consensus 621 ~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~ 656 (1245)
T 3qcw_A 621 PCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER 656 (1245)
T ss_dssp GGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSCE
T ss_pred CCCccCCCCCCEEeCCCCCeEEECCCCCcccccCcc
Confidence 344 68988 899854 38999999 7999999985
No 163
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=57.26 E-value=1.6 Score=39.31 Aligned_cols=33 Identities=24% Similarity=0.651 Sum_probs=23.5
Q ss_pred cccCC---CCCCCCCCeecCC----cccCCCCCC--CCCCCC
Q psy9819 297 QIFSC---PDKCPENRTCINN----QCVCPPRRT--GPDCQE 329 (377)
Q Consensus 297 ~~~~C---~~~C~~~g~C~~g----~C~C~~G~~--G~~C~~ 329 (377)
++++| ..+|..++.|++. .|.|++||+ |..|..
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d 45 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVA 45 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEEE
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCC
Confidence 45677 3569999999765 799999998 666754
No 164
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=56.82 E-value=2.3 Score=41.38 Aligned_cols=26 Identities=27% Similarity=0.667 Sum_probs=0.0
Q ss_pred CC-CCCeecCCcccCCCCCCCCCCCCC
Q psy9819 305 CP-ENRTCINNQCVCPPRRTGPDCQEE 330 (377)
Q Consensus 305 C~-~~g~C~~g~C~C~~G~~G~~C~~~ 330 (377)
|+ ++|+-.-|.|.|.+||.|..||-.
T Consensus 469 C~~g~G~~~CG~C~C~~G~~G~~CeC~ 495 (503)
T 3v4v_B 469 CSDGQGHLQCGVCSCAPGRLGRLCESR 495 (503)
T ss_dssp ---------------------------
T ss_pred cCCCCeeEeCCceECcCCCcCCCCCCC
Confidence 76 677777789999999999999843
No 165
>1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2
Probab=54.36 E-value=7.7 Score=22.23 Aligned_cols=21 Identities=24% Similarity=0.759 Sum_probs=15.2
Q ss_pred CCCCCC-----CCCCeecCCcccCCC
Q psy9819 300 SCPDKC-----PENRTCINNQCVCPP 320 (377)
Q Consensus 300 ~C~~~C-----~~~g~C~~g~C~C~~ 320 (377)
+|..+| ..+|.|.++.|.|.+
T Consensus 6 ~C~~~Ck~~~g~~~gKC~NgkC~Cy~ 31 (31)
T 1cmr_A 6 ECWSVCQRLHNTSKGWCDHRGCICES 31 (31)
T ss_dssp GSSSSSTTTSSCCCCCEETTEECCCC
T ss_pred HHHHHHHHHhCCCCCceeCCCceeCC
Confidence 455566 457899999999853
No 166
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=53.26 E-value=4.2 Score=36.53 Aligned_cols=33 Identities=24% Similarity=0.812 Sum_probs=22.8
Q ss_pred CCCcC---CCCC-CCeecC-CCCeeeecCCCCcc--CCCC
Q psy9819 31 ASLCY---NKCI-YGYCKG-PPDYSCQCELGWTG--VDCS 63 (377)
Q Consensus 31 ~~~C~---~~C~-~G~C~~-~~~~~C~C~~G~~G--~~C~ 63 (377)
+..|. .+|. |++|++ +++|.|.|++||+| ..|.
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 44553 4685 588986 45999999999995 4444
No 167
>4fhq_A Tumor necrosis factor receptor superfamily member; cysteine rich domain, TNF receptor, structural genomics, PSI protein structure initiative; 2.25A {Homo sapiens} PDB: 2aw2_B*
Probab=51.22 E-value=4 Score=32.32 Aligned_cols=49 Identities=22% Similarity=0.590 Sum_probs=24.2
Q ss_pred CCCCCCCCcccCCCCC-CCccCCC-CCC-CCCcCcccccCC-CcceecCCCCc
Q psy9819 92 HCQYCRAGSYGNATTQ-EGCRKCD-CNS-HGNSVLGVCDSI-TGECICQDNTQ 140 (377)
Q Consensus 92 ~C~~C~~g~~g~~c~~-~~C~~~~-C~~-~g~~~~g~C~~~-~g~C~C~~g~~ 140 (377)
.|+.|++|+|-+..+. ..|+++. |.. .+......|... +-+|.|++||.
T Consensus 38 ~C~pC~~gtys~~~n~~~~C~~C~~C~~~~g~~~~~~CT~t~dtvC~C~~G~~ 90 (134)
T 4fhq_A 38 VCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHF 90 (134)
T ss_dssp EEEECCTTEECCSCBCCSSCEECCCCCGGGTEEEEECCCSSSCCEEEECTTEE
T ss_pred cccCCCCCCEecCCCCCCcCcCCCCCCccCCeEEeccCCCCCCccccCCCCCE
Confidence 4446777766554322 4455433 432 122222244432 34788888874
No 168
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=50.00 E-value=6.9 Score=38.62 Aligned_cols=37 Identities=24% Similarity=0.699 Sum_probs=27.1
Q ss_pred cccCCCcceecCCCCc--cCCCccCCCCccCCCCCCCCC
Q psy9819 125 VCDSITGECICQDNTQ--GKNCERCLPGYYGDPTDGGTC 161 (377)
Q Consensus 125 ~C~~~~g~C~C~~g~~--G~~C~~C~~G~~g~~~~~~~C 161 (377)
......|+|.|.+||. +..|+.|++||+........|
T Consensus 257 ~w~~p~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C 295 (536)
T 3fl7_A 257 EWLVPIGQCLCQAGYEKVEDACQACSPGFFKFEASESPC 295 (536)
T ss_dssp CBCCCBCCCEECTTEEEETTEEEECCTTEECCSCCSSCC
T ss_pred CEecccCcEeccCccccCCceeeecCCCCCcccCCCCcc
Confidence 4444479999999997 567889999999764433344
No 169
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=45.74 E-value=2 Score=23.54 Aligned_cols=20 Identities=40% Similarity=1.080 Sum_probs=14.7
Q ss_pred CCCCCCCCCeecCCcccCCC
Q psy9819 301 CPDKCPENRTCINNQCVCPP 320 (377)
Q Consensus 301 C~~~C~~~g~C~~g~C~C~~ 320 (377)
|..+|..+|.|.++.|.|.+
T Consensus 5 C~~~C~~~gKCmNgkC~Cy~ 24 (26)
T 1jlz_A 5 CRKKCKGSGKCINGRCKCYX 24 (26)
T ss_dssp HHHHTTSSEEEETTEEEEC-
T ss_pred hhhhhCCCCEEeCCCceeec
Confidence 33456778899999999865
No 170
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=41.40 E-value=19 Score=26.91 Aligned_cols=22 Identities=23% Similarity=0.480 Sum_probs=17.2
Q ss_pred CCCCCCee---cCC--cccCCCCCCCC
Q psy9819 304 KCPENRTC---INN--QCVCPPRRTGP 325 (377)
Q Consensus 304 ~C~~~g~C---~~g--~C~C~~G~~G~ 325 (377)
.|+.++.| .++ +|+|..||.|.
T Consensus 17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~d 43 (105)
T 1n1i_A 17 NVPENAACYRYLDGTEEWRCLLGFKEV 43 (105)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEEC
T ss_pred CCCCCCCeEECCCCCEeEEEECCeecc
Confidence 47888889 344 79999999864
No 171
>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*
Probab=40.71 E-value=9.4 Score=30.98 Aligned_cols=9 Identities=33% Similarity=0.855 Sum_probs=6.2
Q ss_pred cceecCCCC
Q psy9819 131 GECICQDNT 139 (377)
Q Consensus 131 g~C~C~~g~ 139 (377)
-+|.|++||
T Consensus 109 tvC~C~~G~ 117 (156)
T 3tje_F 109 TKCRCKPNF 117 (156)
T ss_dssp CEEEECTTE
T ss_pred CeeeCCCCC
Confidence 367777776
No 172
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=39.62 E-value=12 Score=29.88 Aligned_cols=18 Identities=17% Similarity=0.366 Sum_probs=16.9
Q ss_pred eecccccCeeeecCCCee
Q psy9819 359 TLHYQVDLIRCTCRQVYL 376 (377)
Q Consensus 359 ~~~~~~~~~~c~~~~~~~ 376 (377)
.|++.+++|+|.|++||.
T Consensus 131 ~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 131 FCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp EEEEETTEEEEECCTTCE
T ss_pred cccCcCCCEEEecCCCcE
Confidence 799999999999999996
No 173
>1bah_A Charybdotoxin, chabii; neurotoxin, potassium channel inhibitor; HET: PCA ABA; NMR {Leiurus quinquestriatus} SCOP: g.3.7.2 PDB: 2a9h_E* 2crd_A* 1lir_A*
Probab=37.93 E-value=12 Score=22.43 Aligned_cols=21 Identities=19% Similarity=0.504 Sum_probs=15.3
Q ss_pred CCCCCC-----CCCCeecCCcccCCC
Q psy9819 300 SCPDKC-----PENRTCINNQCVCPP 320 (377)
Q Consensus 300 ~C~~~C-----~~~g~C~~g~C~C~~ 320 (377)
+|..+| ..+|.|.++.|.|.+
T Consensus 12 ~C~~~Ck~~~g~~~gKCmNgkC~Cyp 37 (37)
T 1bah_A 12 EXWSVCQRLHNTSRGKCMNKKXRCYS 37 (37)
T ss_dssp TTTTHHHHHTSCSCCCBCSSSBCCCC
T ss_pred HHHHHHHHHhCCCCcceeCCCCCcCC
Confidence 455556 467899999999853
No 174
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=35.45 E-value=8.6 Score=37.63 Aligned_cols=27 Identities=37% Similarity=0.886 Sum_probs=23.2
Q ss_pred CCCCCCeecCC-cccCCCCCCCCCCCCC
Q psy9819 304 KCPENRTCINN-QCVCPPRRTGPDCQEE 330 (377)
Q Consensus 304 ~C~~~g~C~~g-~C~C~~G~~G~~C~~~ 330 (377)
.|.++|.|.+. .|.|.+||..++|+..
T Consensus 455 ~C~~~GVCNn~~~CHC~~GwaPP~C~~~ 482 (510)
T 3g5c_A 455 ICSGNGVCSNELKCVCNRHWIGSDCNTY 482 (510)
T ss_dssp SGGGTEEEBTTSCEEECTTEESTTSCEE
T ss_pred ccCCCCeeCCCCCcCCCCCCCCCCCCCC
Confidence 59999999654 7999999999999874
No 175
>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*
Probab=35.33 E-value=15 Score=29.95 Aligned_cols=50 Identities=22% Similarity=0.563 Sum_probs=22.6
Q ss_pred CCCCCCCCCcccCCCC-CCCccCCC-CCCC-CCcCcccccC-CCcceecCCCCc
Q psy9819 91 DHCQYCRAGSYGNATT-QEGCRKCD-CNSH-GNSVLGVCDS-ITGECICQDNTQ 140 (377)
Q Consensus 91 ~~C~~C~~g~~g~~c~-~~~C~~~~-C~~~-g~~~~g~C~~-~~g~C~C~~g~~ 140 (377)
..|..|++|+|-+.-. ...|.++. |... +......|.. .+..|.|++||.
T Consensus 35 t~C~~Cp~GtY~~~~n~~~~C~~C~~C~~~~g~~~~~~Ct~t~~t~C~C~~G~y 88 (167)
T 1jma_B 35 TVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHF 88 (167)
T ss_dssp CEEEECCTTEECSSCBCSSCCEECCCCCTTTTEEEEECCCSSSCCEEEECTTEE
T ss_pred CcCCcCCCCccccccCcCccccCCcccccCCCeEEeccCCCCCCCcccCCCCce
Confidence 3455677776554322 13455432 4321 2211112332 134778888764
No 176
>1pvz_A K+ toxin-like peptide; alpha/beta scaffold; NMR {Mesobuthus martensii} SCOP: g.3.7.2
Probab=34.73 E-value=3.8 Score=23.51 Aligned_cols=19 Identities=47% Similarity=1.233 Sum_probs=15.1
Q ss_pred CCCCCCCCCCeecCCcccC
Q psy9819 300 SCPDKCPENRTCINNQCVC 318 (377)
Q Consensus 300 ~C~~~C~~~g~C~~g~C~C 318 (377)
+|..+|..+|.|.++.|.|
T Consensus 12 ~C~~~C~~~gKC~NgkC~C 30 (31)
T 1pvz_A 12 DCSRKCPGNPPCRNGFCAC 30 (31)
T ss_dssp HHHHHSSSCCCEETTEESC
T ss_pred HHHhhhccCCcccCCCcee
Confidence 3555678899999999988
No 177
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=31.13 E-value=16 Score=30.03 Aligned_cols=48 Identities=21% Similarity=0.558 Sum_probs=24.3
Q ss_pred CCCCCCCCcccCCCC-CCCccCCC--CCCCCCcCcccccCC-CcceecCCCCc
Q psy9819 92 HCQYCRAGSYGNATT-QEGCRKCD--CNSHGNSVLGVCDSI-TGECICQDNTQ 140 (377)
Q Consensus 92 ~C~~C~~g~~g~~c~-~~~C~~~~--C~~~g~~~~g~C~~~-~g~C~C~~g~~ 140 (377)
.|+.|++|.|-..-. ...|+++. |.... .....|... +.+|.|++||.
T Consensus 40 ~C~~C~~gty~~~~n~~~~C~~C~~~C~~~~-~~~~~CT~tsdtvC~C~~G~~ 91 (171)
T 3urf_Z 40 VCAPCPDHYYTDSWHTSDECLYCSPVCKELQ-YVKQECNRTHNRVCECKEGRY 91 (171)
T ss_dssp EEEECCTTEECCSCBCCSSCEECCCCCCTTE-EEEECCCSSSCCEEEECTTEE
T ss_pred ccccCCCCcEecCCCCCCccccCcCccCCCC-EEeccCcCCCCccccCCCCcE
Confidence 344566665554432 24566554 44321 112245432 34788888874
No 178
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=30.94 E-value=11 Score=39.89 Aligned_cols=62 Identities=18% Similarity=0.229 Sum_probs=37.3
Q ss_pred eEEEecCCCCCccccc----ccceee----eEeeecCCCcC-CCCCC-CeecCCC-CeeeecCCCCccCCCCC
Q psy9819 3 IIFRISGLTTAKDDAL----SRCTVL----LLYIFNASLCY-NKCIY-GYCKGPP-DYSCQCELGWTGVDCSV 64 (377)
Q Consensus 3 ~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~C~-~~C~~-G~C~~~~-~~~C~C~~G~~G~~C~~ 64 (377)
||.+-|.|-+.++... .|-.+| ..|+.+...|. +||+| |++...+ ...|.|++||.|..|+.
T Consensus 461 ~I~~~l~PI~eLv~~~~~~~~kr~~Lk~Ai~~Yl~e~~~c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~ 533 (913)
T 3t5o_A 461 VIDFELAPIVDLVRNIPCAVTKRNNLRKALQEYAAKFDPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEK 533 (913)
T ss_dssp EEEEECCBGGGGCCSSTTHHHHHHHHHHHHHHHHHTTCGGGSCCBTTTBEEEEETTEEEEECCTTBCSTTSCC
T ss_pred eeeeeeccHHHHhhccCchHHHHHHHHHHHHhhccccccccCCCCCCCCEeecCCCceEEEccCCccccCccC
Confidence 4555555555533211 233333 33334444443 48987 7888443 56899999999999986
No 179
>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A
Probab=30.67 E-value=17 Score=33.01 Aligned_cols=10 Identities=30% Similarity=0.710 Sum_probs=6.7
Q ss_pred cceecCCCCc
Q psy9819 131 GECICQDNTQ 140 (377)
Q Consensus 131 g~C~C~~g~~ 140 (377)
-+|.|.+||.
T Consensus 88 tvC~C~~G~y 97 (313)
T 3u3p_A 88 RECTCPPGMF 97 (313)
T ss_dssp CEEECCTTEE
T ss_pred ccccCCCCce
Confidence 3677777764
No 180
>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X
Probab=29.02 E-value=27 Score=28.17 Aligned_cols=10 Identities=20% Similarity=0.434 Sum_probs=6.6
Q ss_pred cceecCCCCc
Q psy9819 131 GECICQDNTQ 140 (377)
Q Consensus 131 g~C~C~~g~~ 140 (377)
.+|.|.+||.
T Consensus 77 ~~C~C~~G~y 86 (161)
T 1sg1_X 77 AVCRCAYGYY 86 (161)
T ss_dssp CEEEECTTEE
T ss_pred ceeccCCCeE
Confidence 4777777753
No 181
>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B
Probab=28.70 E-value=16 Score=31.40 Aligned_cols=9 Identities=22% Similarity=0.733 Sum_probs=7.2
Q ss_pred cceecCCCC
Q psy9819 131 GECICQDNT 139 (377)
Q Consensus 131 g~C~C~~g~ 139 (377)
.+|.|++||
T Consensus 109 tvC~C~~G~ 117 (216)
T 3me4_A 109 RRCACTAGY 117 (216)
T ss_dssp CEEEECTTE
T ss_pred ccccCCCCe
Confidence 478888886
No 182
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=28.40 E-value=23 Score=26.19 Aligned_cols=50 Identities=22% Similarity=0.551 Sum_probs=31.4
Q ss_pred CCCeecC--CCCeeeecCCCCccC--CCCC----CC-----CCCCCceeecC-------CCcccCCCCCCC
Q psy9819 39 IYGYCKG--PPDYSCQCELGWTGV--DCSV----NC-----LCNNHSTCVHG-------IGICDECHDWTT 89 (377)
Q Consensus 39 ~~G~C~~--~~~~~C~C~~G~~G~--~C~~----~C-----~C~~~g~C~~~-------~~~C~~C~~g~~ 89 (377)
.|..|.. ++..+|+|.+||.|+ .|.+ +| .|.-+++|... ..+| .|.++|.
T Consensus 14 ~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C-~C~~g~~ 83 (99)
T 1ob1_C 14 QNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITC-ECTKPDS 83 (99)
T ss_dssp TTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEE-EECSTTC
T ss_pred CCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEe-EeCCCCc
Confidence 3677865 457899999999974 3443 23 24455667622 3567 5766654
No 183
>1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R
Probab=27.29 E-value=18 Score=29.40 Aligned_cols=48 Identities=25% Similarity=0.711 Sum_probs=22.2
Q ss_pred CCCCCCCcccCCCCC-CCccCCC-CCC-CCCcCcccccCC-CcceecCCCCc
Q psy9819 93 CQYCRAGSYGNATTQ-EGCRKCD-CNS-HGNSVLGVCDSI-TGECICQDNTQ 140 (377)
Q Consensus 93 C~~C~~g~~g~~c~~-~~C~~~~-C~~-~g~~~~g~C~~~-~g~C~C~~g~~ 140 (377)
|+.|++|+|-+.... ..|+++. |.. .+......|... +.+|.|++||.
T Consensus 42 C~~C~~gty~~~~n~~~~C~~C~~C~~~~~~~~~~~Ct~t~dt~C~C~~G~y 93 (162)
T 1ext_A 42 CRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQY 93 (162)
T ss_dssp EEECCTTEECCSSBCCSSCEECCCCCGGGTCEEEECCBTTBCCEEECCTTEE
T ss_pred cccCCCCccccccCCCCcccccCCCCCCCCEEEEecccCCCCCCccCCCCce
Confidence 445666665544322 3455443 432 222222234322 23777777764
No 184
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=27.20 E-value=20 Score=29.63 Aligned_cols=47 Identities=23% Similarity=0.608 Sum_probs=22.7
Q ss_pred CCCCCCCcccCCCCC-CCccCCC--CCCCCCcCcccccCC-CcceecCCCCc
Q psy9819 93 CQYCRAGSYGNATTQ-EGCRKCD--CNSHGNSVLGVCDSI-TGECICQDNTQ 140 (377)
Q Consensus 93 C~~C~~g~~g~~c~~-~~C~~~~--C~~~g~~~~g~C~~~-~g~C~C~~g~~ 140 (377)
|+.|++|.|-..-.. ..|+++. |.. +......|... +-+|.|++||.
T Consensus 43 C~pC~~gtY~~~~n~~~~C~~C~~~C~~-~~~~~~~Ct~tsdtvC~C~~G~~ 93 (176)
T 3k51_B 43 CGPCPPRHYTQFWNYLERCRYCNVLCGE-REEEARACHATHNRACRCRTGFF 93 (176)
T ss_dssp EEECCTTEECCSCBCCSSCEECCCCCCS-SEEEEECCBTTBCCEEEECTTEE
T ss_pred cccCCCCCeecCCCCCCcCccccCcCCC-CCEEeccCcCCCCceeeccCCee
Confidence 345666654433222 4565543 432 22112245443 34788888874
No 185
>2lix_A IMKTX104, potassium channel toxins; disulfide bond stabilized structure; NMR {Lychas mucronatus}
Probab=32.75 E-value=14 Score=19.49 Aligned_cols=11 Identities=36% Similarity=1.171 Sum_probs=7.9
Q ss_pred CCeecCCcccC
Q psy9819 308 NRTCINNQCVC 318 (377)
Q Consensus 308 ~g~C~~g~C~C 318 (377)
-|+|++|.|+|
T Consensus 16 igtcvdgkckc 26 (27)
T 2lix_A 16 IGTCVDGKCKC 26 (27)
Confidence 46777777776
No 186
>1du3_A Death receptor 5; trail, DR5, complex; 2.20A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1d0g_R 2h9g_R 1za3_R 1d4v_A
Probab=26.16 E-value=34 Score=26.61 Aligned_cols=8 Identities=38% Similarity=1.103 Sum_probs=5.2
Q ss_pred ceecCCCC
Q psy9819 132 ECICQDNT 139 (377)
Q Consensus 132 ~C~C~~g~ 139 (377)
+|.|++||
T Consensus 83 vC~C~~G~ 90 (130)
T 1du3_A 83 VCQCEEGT 90 (130)
T ss_dssp EEEECTTC
T ss_pred EecCCCCe
Confidence 56666665
No 187
>2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY crystallography, neuregulins, heparin-binding, cell CY signaling protein; HET: NAG NDG; 2.40A {Homo sapiens} PDB: 3u2p_A*
Probab=25.55 E-value=34 Score=34.25 Aligned_cols=31 Identities=32% Similarity=0.803 Sum_probs=17.2
Q ss_pred eee-cCCCcccCCCCCCCCCCCC-CCCCCcccC
Q psy9819 73 TCV-HGIGICDECHDWTTGDHCQ-YCRAGSYGN 103 (377)
Q Consensus 73 ~C~-~~~~~C~~C~~g~~G~~C~-~C~~g~~g~ 103 (377)
+|. +....|..|.+-..+..|. .|++||++.
T Consensus 544 tC~Gp~~~~C~~C~~~~~~~~Cv~~CP~G~~~~ 576 (617)
T 2ahx_A 544 TCHGPGPDNCTKCSHFKDGPNCVEKCPDGLQGA 576 (617)
T ss_dssp SBSSSSTTSBSSBSSEEETTEEESSCCEEEEBS
T ss_pred ccCCCCCCccccCcccccCCceeccCCCCcccc
Confidence 444 3344565666544455663 577777654
No 188
>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}
Probab=25.27 E-value=43 Score=27.45 Aligned_cols=16 Identities=38% Similarity=0.904 Sum_probs=9.8
Q ss_pred ecCCCCeeeecCCCCc
Q psy9819 43 CKGPPDYSCQCELGWT 58 (377)
Q Consensus 43 C~~~~~~~C~C~~G~~ 58 (377)
|+...+-+|.|++||+
T Consensus 75 Ct~t~d~~C~C~~G~~ 90 (177)
T 3qd6_R 75 GTSETDTICTCEEGWH 90 (177)
T ss_dssp CCTTSCCEEEECTTEE
T ss_pred CcCCCCceeecCCCcE
Confidence 4433355677777776
No 189
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=24.73 E-value=24 Score=37.18 Aligned_cols=32 Identities=28% Similarity=0.760 Sum_probs=25.6
Q ss_pred CCCCCCCCCCeec-CC---cccCCCCCCCCCCCCCCC
Q psy9819 300 SCPDKCPENRTCI-NN---QCVCPPRRTGPDCQEEIC 332 (377)
Q Consensus 300 ~C~~~C~~~g~C~-~g---~C~C~~G~~G~~C~~~~C 332 (377)
.|. +|.|+|+++ .+ .|.|++||.|..|+...+
T Consensus 501 ~C~-PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~~~ 536 (913)
T 3t5o_A 501 QCA-PCPNNGRPTLSGTECLCVCQSGTYGENCEKQSP 536 (913)
T ss_dssp GSC-CBTTTBEEEEETTEEEEECCTTBCSTTSCCBCS
T ss_pred cCC-CCCCCCEeecCCCceEEEccCCccccCccCccc
Confidence 343 799999996 44 688999999999998653
No 190
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=24.11 E-value=27 Score=33.66 Aligned_cols=15 Identities=40% Similarity=0.920 Sum_probs=8.4
Q ss_pred cceecCCCCccCCCc
Q psy9819 131 GECICQDNTQGKNCE 145 (377)
Q Consensus 131 g~C~C~~g~~G~~C~ 145 (377)
|.|.|.+||.|..||
T Consensus 458 G~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 458 GVCRCGPGWLGSQCE 472 (472)
T ss_dssp TEEEECTTC------
T ss_pred CceECcCCCCCCCCC
Confidence 689999999999986
No 191
>1wz5_A Potassium channel blocking toxin 1; ionic channel inhibitor; HET: ABA; NMR {Pandinus imperator}
Probab=23.69 E-value=34 Score=20.10 Aligned_cols=15 Identities=40% Similarity=0.877 Sum_probs=12.3
Q ss_pred CCCCeecCCcccCCC
Q psy9819 306 PENRTCINNQCVCPP 320 (377)
Q Consensus 306 ~~~g~C~~g~C~C~~ 320 (377)
..+|.|.++.|.|.+
T Consensus 20 ~~~gKCmNgkC~Cy~ 34 (35)
T 1wz5_A 20 XPNSKCINRMCKCYG 34 (35)
T ss_dssp SSCCEEETTEEECSC
T ss_pred CCCcceeCCcceecC
Confidence 457899999999965
No 192
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=22.02 E-value=36 Score=33.17 Aligned_cols=27 Identities=22% Similarity=0.674 Sum_probs=21.4
Q ss_pred CCCCCceeecCCCcccCCCCCCCCCCCCC
Q psy9819 67 LCNNHSTCVHGIGICDECHDWTTGDHCQY 95 (377)
Q Consensus 67 ~C~~~g~C~~~~~~C~~C~~g~~G~~C~~ 95 (377)
.|+++|.|+. ...| .|.+||+.+.|+.
T Consensus 455 ~C~~~GVCNn-~~~C-HC~~GwaPP~C~~ 481 (510)
T 3g5c_A 455 ICSGNGVCSN-ELKC-VCNRHWIGSDCNT 481 (510)
T ss_dssp SGGGTEEEBT-TSCE-EECTTEESTTSCE
T ss_pred ccCCCCeeCC-CCCc-CCCCCCCCCCCCC
Confidence 4788888864 4567 7999999999975
No 193
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=21.02 E-value=44 Score=32.68 Aligned_cols=30 Identities=30% Similarity=0.810 Sum_probs=22.8
Q ss_pred cCCCcCC----CC-CCCeecCC--CCeeeecCCCCcc
Q psy9819 30 NASLCYN----KC-IYGYCKGP--PDYSCQCELGWTG 59 (377)
Q Consensus 30 ~~~~C~~----~C-~~G~C~~~--~~~~C~C~~G~~G 59 (377)
.+..|++ || .|..|+.. +.|.|+|+.||.|
T Consensus 17 ~~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag 53 (551)
T 3fby_A 17 AQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAG 53 (551)
T ss_dssp BCCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEES
T ss_pred ccccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCC
Confidence 3567864 88 46889853 4789999999996
No 194
>1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine kinase, glycoprotein, antigen:antibody complex, FAB fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A*
Probab=20.04 E-value=29 Score=34.82 Aligned_cols=19 Identities=32% Similarity=0.732 Sum_probs=11.2
Q ss_pred CcCCCCCCCeecCCCCeee
Q psy9819 33 LCYNKCIYGYCKGPPDYSC 51 (377)
Q Consensus 33 ~C~~~C~~G~C~~~~~~~C 51 (377)
.|...|..|+|.+|+.-.|
T Consensus 481 ~C~~~C~~g~C~Gp~~~~C 499 (624)
T 1yy9_A 481 VCHALCSPEGCWGPEPRDC 499 (624)
T ss_dssp SCCTTBCTTCBSSSSGGGB
T ss_pred CcCCcCCCCCCCCCCcccc
Confidence 4555566667776654444
Done!