Your job contains 1 sequence.
>psy9819
MSIIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGV
DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN
SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLG
SGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDG
LPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFS
CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTL
HYQVDLIRCTCRQVYLI
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9819
(377 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031981 - symbol:CG7466 species:7227 "Drosophila m... 835 3.0e-83 3
ZFIN|ZDB-GENE-090730-1 - symbol:megf8 "multiple EGF-like-... 625 7.3e-61 2
UNIPROTKB|E1BPS6 - symbol:MEGF8 "Uncharacterized protein"... 583 7.7e-57 2
UNIPROTKB|F1RGK2 - symbol:MEGF8 "Uncharacterized protein"... 583 1.0e-56 2
UNIPROTKB|Q7Z7M0 - symbol:MEGF8 "Multiple epidermal growt... 584 1.1e-56 2
UNIPROTKB|E2RM39 - symbol:MEGF8 "Uncharacterized protein"... 582 1.6e-56 2
RGD|621190 - symbol:Megf8 "multiple EGF-like-domains 8" s... 580 2.7e-56 2
MGI|MGI:2446294 - symbol:Megf8 "multiple EGF-like-domains... 575 9.0e-56 2
MGI|MGI:99909 - symbol:Lama3 "laminin, alpha 3" species:1... 275 1.9e-21 1
UNIPROTKB|F1MDD5 - symbol:Bt.12589 "Uncharacterized prote... 256 1.4e-18 1
UNIPROTKB|E2RPP1 - symbol:LAMA3 "Uncharacterized protein"... 254 2.6e-18 1
ZFIN|ZDB-GENE-081028-60 - symbol:atrnl1a "attractin-like ... 248 4.9e-18 1
UNIPROTKB|Q16787 - symbol:LAMA3 "Laminin subunit alpha-3"... 251 6.0e-18 1
RGD|69063 - symbol:Atrn "attractin" species:10116 "Rattus... 234 7.3e-18 2
UNIPROTKB|E1BYK5 - symbol:ATRNL1 "Uncharacterized protein... 226 9.2e-18 2
MGI|MGI:1341628 - symbol:Atrn "attractin" species:10090 "... 232 1.3e-17 2
UNIPROTKB|F1P2W2 - symbol:ATRN "Uncharacterized protein" ... 230 1.4e-17 2
ZFIN|ZDB-GENE-090312-21 - symbol:atrn "attractin" species... 222 1.8e-17 2
UNIPROTKB|E2R6C0 - symbol:ATRNL1 "Uncharacterized protein... 224 2.1e-17 2
ZFIN|ZDB-GENE-030131-8092 - symbol:atrnl1b "attractin-lik... 242 2.5e-17 1
UNIPROTKB|F1M3T8 - symbol:Atrnl1 "Protein Atrnl1" species... 222 2.6e-17 2
MGI|MGI:2147749 - symbol:Atrnl1 "attractin like 1" specie... 223 2.8e-17 2
UNIPROTKB|Q5VV63 - symbol:ATRNL1 "Attractin-like protein ... 223 2.8e-17 2
UNIPROTKB|Q6VU69 - symbol:LAMA3 "Laminin subunit alpha-3"... 242 3.2e-17 1
UNIPROTKB|B0YJ33 - symbol:LAMA3 "Laminin subunit alpha-3"... 242 3.4e-17 1
UNIPROTKB|F1Q117 - symbol:ATRN "Uncharacterized protein" ... 227 5.3e-17 2
UNIPROTKB|Q8MJ16 - symbol:ATRN "Uncharacterized protein" ... 226 6.9e-17 2
UNIPROTKB|F1S8B6 - symbol:ATRN "Uncharacterized protein" ... 226 6.9e-17 2
UNIPROTKB|O75882 - symbol:ATRN "Attractin" species:9606 "... 226 7.1e-17 2
UNIPROTKB|I3LV27 - symbol:LAMA3 "Uncharacterized protein"... 239 7.4e-17 1
UNIPROTKB|F1LU77 - symbol:F1LU77 "Uncharacterized protein... 247 7.7e-17 2
UNIPROTKB|F1SBB3 - symbol:LAMA3 "Uncharacterized protein"... 239 7.7e-17 1
UNIPROTKB|P25391 - symbol:LAMA1 "Laminin subunit alpha-1"... 212 7.8e-17 2
UNIPROTKB|K7GNE0 - symbol:ATRN "Uncharacterized protein" ... 226 8.3e-17 2
WB|WBGene00006432 - symbol:tag-53 species:6239 "Caenorhab... 237 9.4e-17 1
UNIPROTKB|F1NQC4 - symbol:F1NQC4 "Uncharacterized protein... 167 1.1e-16 2
UNIPROTKB|F1MER7 - symbol:HSPG2 "Uncharacterized protein"... 222 1.9e-16 2
RGD|628776 - symbol:Lama3 "laminin, alpha 3" species:1011... 237 3.6e-16 2
MGI|MGI:96257 - symbol:Hspg2 "perlecan (heparan sulfate p... 216 4.4e-16 2
UNIPROTKB|E1BXK1 - symbol:LAMC2 "Uncharacterized protein"... 209 6.8e-16 2
MGI|MGI:99892 - symbol:Lama1 "laminin, alpha 1" species:1... 220 8.4e-16 2
UNIPROTKB|E9PTR0 - symbol:E9PTR0 "Uncharacterized protein... 232 1.3e-15 2
UNIPROTKB|F1N8P9 - symbol:LAMA1 "Uncharacterized protein"... 211 1.8e-15 2
UNIPROTKB|F1NM47 - symbol:LAMA1 "Uncharacterized protein"... 211 1.8e-15 2
WB|WBGene00006787 - symbol:unc-52 species:6239 "Caenorhab... 216 1.9e-15 2
UNIPROTKB|Q06561 - symbol:unc-52 "Basement membrane prote... 216 1.9e-15 2
UNIPROTKB|E5RFQ2 - symbol:LAMA4 "Laminin subunit alpha-4"... 213 2.2e-15 1
RGD|1582797 - symbol:Megf11 "multiple EGF-like-domains 11... 195 2.2e-15 2
FB|FBgn0039528 - symbol:dsd "distracted" species:7227 "Dr... 225 2.3e-15 1
ZFIN|ZDB-GENE-060118-1 - symbol:lama1 "laminin, alpha 1" ... 228 2.6e-15 2
UNIPROTKB|F1MXV1 - symbol:ATRNL1 "Uncharacterized protein... 205 2.6e-15 2
RGD|1307207 - symbol:Lama1 "laminin, alpha 1" species:101... 217 3.1e-15 2
UNIPROTKB|F1PJ02 - symbol:LAMA1 "Uncharacterized protein"... 226 3.5e-15 2
WB|WBGene00013416 - symbol:Y64G10A.7 species:6239 "Caenor... 196 4.0e-15 2
ZFIN|ZDB-GENE-060503-252 - symbol:megf11 "multiple EGF-li... 197 4.4e-15 2
WB|WBGene00001328 - symbol:epi-1 species:6239 "Caenorhabd... 227 4.6e-15 1
WB|WBGene00016913 - symbol:lam-2 species:6239 "Caenorhabd... 217 4.9e-15 2
MGI|MGI:1920951 - symbol:Megf11 "multiple EGF-like-domain... 191 8.1e-15 2
UNIPROTKB|D4AA94 - symbol:Megf6 "Multiple epidermal growt... 181 1.0e-14 2
RGD|735084 - symbol:Megf10 "multiple EGF-like domains 10"... 164 1.0e-14 2
UNIPROTKB|P24821 - symbol:TNC "Tenascin" species:9606 "Ho... 154 1.7e-14 2
MGI|MGI:101922 - symbol:Tnc "tenascin C" species:10090 "M... 149 1.7e-14 2
UNIPROTKB|A0JM12 - symbol:megf10 "Multiple epidermal grow... 194 2.1e-14 2
UNIPROTKB|A6BM72 - symbol:MEGF11 "Multiple epidermal grow... 187 2.1e-14 2
ZFIN|ZDB-GENE-080506-1 - symbol:megf10 "multiple EGF-like... 193 2.1e-14 2
UNIPROTKB|F1MYX9 - symbol:LAMA4 "Uncharacterized protein"... 218 2.2e-14 1
UNIPROTKB|F1MEG3 - symbol:LAMA1 "Uncharacterized protein"... 216 2.7e-14 2
UNIPROTKB|F1PR66 - symbol:LAMA4 "Uncharacterized protein"... 217 2.7e-14 1
UNIPROTKB|F1P420 - symbol:LAMA2 "Uncharacterized protein"... 198 2.9e-14 2
UNIPROTKB|E1C393 - symbol:MEGF10 "Uncharacterized protein... 194 3.5e-14 2
ZFIN|ZDB-GENE-090312-12 - symbol:megf6a "multiple EGF-lik... 195 5.4e-14 2
FB|FBgn0261800 - symbol:LanB1 "LanB1" species:7227 "Droso... 214 6.0e-14 1
FB|FBgn0261563 - symbol:wb "wing blister" species:7227 "D... 211 6.2e-14 2
UNIPROTKB|F1M2P5 - symbol:Atrnl1 "Protein Atrnl1" species... 192 6.5e-14 2
UNIPROTKB|Q16363 - symbol:LAMA4 "Laminin subunit alpha-4"... 213 8.0e-14 1
ZFIN|ZDB-GENE-980526-104 - symbol:tnc "tenascin C" specie... 140 9.4e-14 2
UNIPROTKB|F1NQ51 - symbol:LAMA3 "Uncharacterized protein"... 226 9.7e-14 2
UNIPROTKB|F1MRZ6 - symbol:TNC "Uncharacterized protein" s... 150 9.8e-14 2
UNIPROTKB|P98160 - symbol:HSPG2 "Basement membrane-specif... 205 1.0e-13 2
ZFIN|ZDB-GENE-021226-1 - symbol:lamb1a "laminin, beta 1a"... 208 1.1e-13 2
WB|WBGene00002248 - symbol:lam-3 species:6239 "Caenorhabd... 203 1.3e-13 2
UNIPROTKB|F1SAE9 - symbol:LAMB1 "Uncharacterized protein"... 212 1.6e-13 2
UNIPROTKB|F1PFM5 - symbol:LAMB3 "Uncharacterized protein"... 203 2.0e-13 2
RGD|2988 - symbol:Lamb2 "laminin, beta 2" species:10116 "... 197 2.0e-13 2
FB|FBgn0002526 - symbol:LanA "Laminin A" species:7227 "Dr... 213 2.1e-13 2
UNIPROTKB|F1PPP5 - symbol:NOTCH2 "Uncharacterized protein... 202 2.5e-13 2
FB|FBgn0002528 - symbol:LanB2 "Laminin B2" species:7227 "... 204 2.7e-13 2
UNIPROTKB|F1PS94 - symbol:NOTCH2 "Uncharacterized protein... 202 2.8e-13 2
UNIPROTKB|Q96KG7 - symbol:MEGF10 "Multiple epidermal grow... 182 3.2e-13 2
UNIPROTKB|Q13751 - symbol:LAMB3 "Laminin subunit beta-3" ... 201 3.4e-13 2
MGI|MGI:2685177 - symbol:Megf10 "multiple EGF-like-domain... 186 3.7e-13 2
ZFIN|ZDB-GENE-080807-4 - symbol:hspg2 "heparan sulfate pr... 189 3.8e-13 2
UNIPROTKB|P10039 - symbol:TNC "Tenascin" species:9031 "Ga... 136 4.5e-13 2
UNIPROTKB|F1N8F4 - symbol:TNC "Tenascin" species:9031 "Ga... 133 4.5e-13 2
UNIPROTKB|F1MMT2 - symbol:LAMA2 "Uncharacterized protein"... 202 4.6e-13 2
UNIPROTKB|F1MMK1 - symbol:LAMB3 "Uncharacterized protein"... 197 4.7e-13 2
UNIPROTKB|F1P0Z5 - symbol:Gga.39688 "Uncharacterized prot... 178 4.8e-13 2
UNIPROTKB|E2RQ32 - symbol:MEGF10 "Uncharacterized protein... 186 5.4e-13 2
UNIPROTKB|Q29116 - symbol:TNC "Tenascin" species:9823 "Su... 152 5.4e-13 2
UNIPROTKB|F1MET4 - symbol:MEGF10 "Uncharacterized protein... 186 6.2e-13 2
WARNING: Descriptions of 517 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0031981 [details] [associations]
symbol:CG7466 species:7227 "Drosophila melanogaster"
[GO:0016020 "membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
EMBL:AE014134 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR009030 SUPFAM:SSF57184
HSSP:P35555 Pfam:PF12661 InterPro:IPR011043 SUPFAM:SSF50965
OMA:GHSMVFH FlyBase:FBgn0031981 RefSeq:NP_609180.2 UniGene:Dm.2153
ProteinModelPortal:Q9VLT6 SMR:Q9VLT6 MINT:MINT-1329221
EnsemblMetazoa:FBtr0079541 GeneID:34099 KEGG:dme:Dmel_CG7466
UCSC:CG7466-RA InParanoid:Q9VLT6 PhylomeDB:Q9VLT6 GenomeRNAi:34099
NextBio:786863 ArrayExpress:Q9VLT6 Bgee:Q9VLT6 Uniprot:Q9VLT6
Length = 2898
Score = 835 (299.0 bits), Expect = 3.0e-83, Sum P(3) = 3.0e-83
Identities = 153/320 (47%), Positives = 190/320 (59%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
CY C G C GPPDY+C+C LGWTG DC ++C CNNHSTC +G CD+C DW+ G+ C
Sbjct: 1232 CYELCQNGNCSGPPDYTCRCALGWTGADCGLSCGCNNHSTCNERLGKCDQCQDWSEGEKC 1291
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+ CR GSYGNAT GC C+CN HGN LGVC+ GEC C+DNTQG NCE C PGYYG
Sbjct: 1292 ERCRQGSYGNATAPHGCLPCECNGHGNQDLGVCNVSNGECYCKDNTQGLNCELCAPGYYG 1351
Query: 154 DPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTA 213
DP GG CYYQC +RG+LT G +GS + R+ W G +ECLWI+ T
Sbjct: 1352 DPRGGGKCYYQCESRGILTNIGKSAIGSYQSYRSPW-GASLEVKECLWIL-----QPKTL 1405
Query: 214 PADIILLRLQ---PDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYE 270
A+ LL+L+ + + C+ENAVYIYD LPD G T Q+ L V C +
Sbjct: 1406 QAEKSLLQLEFQWQSLAMDCDENAVYIYDSLPDLT---GATQQNQLLAVVCAP--YSSPR 1460
Query: 271 VLEAKSGVMTIHYKQGKPSE--GFNATYQIFSC-PDKCPENRTCINNQ-CVCPPRRTGPD 326
++EA+S +T+HYKQG GFNA Y + +C C C Q CVCP G
Sbjct: 1461 IIEARSSHVTVHYKQGSERRHFGFNALYSVMNCVAGSCISPHICDAQQRCVCPAGYVGAS 1520
Query: 327 CQEEICPNECHEFLNHGTCD 346
C+ EICP+ C+ G CD
Sbjct: 1521 CEIEICPSNCNAKRMQGFCD 1540
Score = 196 (74.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 36/96 (37%), Positives = 50/96 (52%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHG--IGICDECHDWTTG 90
+C C+ G C P CQC+ G+ G +CS+ CLCN HS C + IC +CH+ T G
Sbjct: 2274 VCSQGCVRGNCVSPDQ--CQCDFGYVGANCSIQCLCNGHSNCESSSRLDICLKCHNNTMG 2331
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC 126
+ C+ C+ GN C+ C HG+S VC
Sbjct: 2332 EQCEKCQPLFVGNPREGHACQPCLDYCHGHS--DVC 2365
Score = 160 (61.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 40/152 (26%), Positives = 66/152 (43%)
Query: 194 TPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQ 253
T C W+I DS I L + C+ + +Y+YDG F +++ G+
Sbjct: 54 TQDSHCEWLIKARNDSQ------YITLTFH-SMGTECSYDYIYVYDG-DSFNSTLLGSFS 105
Query: 254 STTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCIN 313
T + R ++ ++ ++ +GF A+Y I +C + C + C+
Sbjct: 106 GRTQP---QRLVARSGSLIFFLQMLILMYSDTNYVLDGFRASYYISNCLNNCHNHGKCVG 162
Query: 314 NQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+QCVC GPDC++E CP C E G C
Sbjct: 163 HQCVCHGEWVGPDCEDEACPQRCGESQGRGRC 194
Score = 135 (52.6 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 41/124 (33%), Positives = 55/124 (44%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
Y+C C G+ G D +C+ + C +G C D+T C+ C G G
Sbjct: 1212 YNCHCRRGYIG-DGKFSCVRTCYELCQNGN--CSGPPDYT----CR-CALGWTG---ADC 1260
Query: 109 GCRKCDCNSHG--NSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY-YQC 165
G C CN+H N LG CD CQD ++G+ CERC G YG+ T C +C
Sbjct: 1261 GL-SCGCNNHSTCNERLGKCDQ------CQDWSEGEKCERCRQGSYGNATAPHGCLPCEC 1313
Query: 166 MARG 169
G
Sbjct: 1314 NGHG 1317
Score = 133 (51.9 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 35/101 (34%), Positives = 44/101 (43%)
Query: 81 CDECHDWTTGDHCQYCRAGSY-GNATTQEGCRKCDCNSHGN---SVLGV---CDSIT-GE 132
C C + T GD C C G + G+ + CR C C+ HGN V G C + T +
Sbjct: 2396 CLRCGNHTAGDRCDSCLTGYFRGSEDLHKECRPCQCHGHGNICDPVTGEKCNCANNTESD 2455
Query: 133 CICQDNTQGKN---------CERCLPGYYGDPTDGGTCYYQ 164
C GKN C +C Y G+PTDG CY Q
Sbjct: 2456 ATCTAGG-GKNSAQLCWMVQCSKCRDSYAGNPTDGHQCYKQ 2495
Score = 72 (30.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 16/58 (27%), Positives = 22/58 (37%)
Query: 29 FNASLCYNKCIYGYCKGP----PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICD 82
FNA C+ G C P C C G+ G C + +C ++ G CD
Sbjct: 1484 FNALYSVMNCVAGSCISPHICDAQQRCVCPAGYVGASCEIE-ICPSNCNAKRMQGFCD 1540
Score = 50 (22.7 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 278 VMTIHYKQGKPSEG--FNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNE 335
V++ HY Q P+E N + + ++C + T + +CVC G ++ C
Sbjct: 2219 VVSWHYVQC-PAENECINGHHNCDTVSEQCIDLDTAVGYKCVCAQ---GYREEQGACLPV 2274
Query: 336 CHEFLNHGTC 345
C + G C
Sbjct: 2275 CSQGCVRGNC 2284
Score = 44 (20.5 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 292 FNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGT-CD 346
+NAT C + +R C + C+ R D +E P +CH HG CD
Sbjct: 2392 YNAT--CLRCGNHTAGDR-C--DSCLTGYFRGSEDLHKECRPCQCH---GHGNICD 2439
Score = 42 (19.8 bits), Expect = 3.0e-83, Sum P(3) = 3.0e-83
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 330 EICPNECHEFLNHGTC 345
E CP CH + N C
Sbjct: 2088 ESCPLPCHTYENCSLC 2103
Score = 39 (18.8 bits), Expect = 6.3e-83, Sum P(3) = 6.3e-83
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 332 CPNECHEFLNHGTC 345
CP CH + +C
Sbjct: 2151 CPEPCHVYTQCSSC 2164
Score = 38 (18.4 bits), Expect = 3.0e-83, Sum P(3) = 3.0e-83
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 34 CYNKCIYGYCKGPPDYS-CQCELGWTGVDCSVN 65
C +C +G S C C G++G C ++
Sbjct: 181 CPQRCGESQGRGRCQKSICHCSRGYSGRLCDLS 213
>ZFIN|ZDB-GENE-090730-1 [details] [associations]
symbol:megf8 "multiple EGF-like-domains 8"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=IMP] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:1900164
"nodal signaling pathway involved in determination of lateral
mesoderm left/right asymmetry" evidence=IMP] [GO:0042074 "cell
migration involved in gastrulation" evidence=IMP] [GO:0055113
"epiboly involved in gastrulation with mouth forming second"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR006652 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01344 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-090730-1 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 GO:GO:0007368 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0042074 GO:GO:0055113
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR024731 Pfam:PF12947
EMBL:BX571757 EMBL:BX571761 IPI:IPI00933480
Ensembl:ENSDART00000110951 Uniprot:F1R219
Length = 2774
Score = 625 (225.1 bits), Expect = 7.3e-61, Sum P(2) = 7.3e-61
Identities = 129/338 (38%), Positives = 177/338 (52%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWT---------GVDCSVNCLCNNHSTCVHGIGICDEC 84
CYN+C G C G P + C+C LGWT GV+C V+C CN HSTC+ GICD+C
Sbjct: 1107 CYNECRQGRCSGSPLFECECSLGWTSDPATLVLSGVECDVDCGCNFHSTCITAPGICDQC 1166
Query: 85 H--DWTTGDHCQYCRAGSYGNATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
DWTTG HC++C+ GS+G+A + +GC C CN HG+ + G C + TG+C C +TQG
Sbjct: 1167 QGLDWTTGPHCEHCKPGSFGSALARGDGCVPCQCNGHGDPLQGFCHNQTGQCYCTHHTQG 1226
Query: 142 KNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPG-PQGLGSGLAERNAWEGKDTPS---- 196
+CE CLPGYYGDP D GTC+ QC R +L P L S L A G
Sbjct: 1227 PHCESCLPGYYGDPRDNGTCFSQCQGRSVLLSSSVPLSLSSSLGWHGAVGGHGGVGGHGG 1286
Query: 197 -RECLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTH 252
CLW++ S D P + L PD + C + VY++DGLP F+++ G H
Sbjct: 1287 LSHCLWVLSVSQDLAPCMPGQSCPPVALTWHPDSHTHCTNSYVYVFDGLPRFLSN-GVVH 1345
Query: 253 QSTTL-GVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPS---EGFNATYQIFSCPDKCPEN 308
L G FC V EA SGV++++++ S +GFNA++ + C + +
Sbjct: 1346 SHHNLIGAFCGTTRMEPITV-EATSGVVSVYFEANVTSGRAQGFNASFWVKRCGNGSTDE 1404
Query: 309 RTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
T I+ +C + G C +C EC L CD
Sbjct: 1405 GTVISAEC-----QAGAQCINGLC--ECPHGLGGPQCD 1435
Score = 213 (80.0 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 52/169 (30%), Positives = 77/169 (45%)
Query: 199 CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQST 255
CLW++ S D P + L PD + C + VY++DGLP F+++ G H
Sbjct: 1290 CLWVLSVSQDLAPCMPGQSCPPVALTWHPDSHTHCTNSYVYVFDGLPRFLSN-GVVHSHH 1348
Query: 256 TL-GVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPS---EGFNATYQIFSCPD-------- 303
L G FC V EA SGV++++++ S +GFNA++ + C +
Sbjct: 1349 NLIGAFCGTTRMEPITV-EATSGVVSVYFEANVTSGRAQGFNASFWVKRCGNGSTDEGTV 1407
Query: 304 ---KCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLL 349
+C CIN C CP GP C +CP C GTC++ L
Sbjct: 1408 ISAECQAGAQCINGLCECPHGLGGPQCDRPVCPGSCGAEEGRGTCNMNL 1456
Score = 168 (64.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 34/91 (37%), Positives = 43/91 (47%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC--VHGIGICDECHDWTTG 90
+C C+ G C P CQC G+ G +CS C CN HS C + + C EC + T G
Sbjct: 2166 VCAQGCVNGTCISPG--ICQCHFGFVGENCSSQCRCNKHSNCKSISQLDTCLECKNNTKG 2223
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
HC C+ G+A CR C GNS
Sbjct: 2224 QHCDKCKPLFVGSAMGGGMCRPCREFCRGNS 2254
Score = 129 (50.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 39/120 (32%), Positives = 54/120 (45%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT 105
P Y C C G+ V SV+ C C G + C + CQ C G G
Sbjct: 2143 PEGYHCTCRQGY--VLSSVSGQCE--PVCAQGC-VNGTC---ISPGICQ-CHFGFVG--- 2190
Query: 106 TQEGCR-KCDCNSHGNSVLGVCDSIT--GECI-CQDNTQGKNCERCLPGYYGDPTDGGTC 161
E C +C CN H N C SI+ C+ C++NT+G++C++C P + G GG C
Sbjct: 2191 --ENCSSQCRCNKHSN-----CKSISQLDTCLECKNNTKGQHCDKCKPLFVGSAMGGGMC 2243
Score = 125 (49.1 bits), Expect = 0.00068, P = 0.00068
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 226 INVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIH-YK 284
I+ C + +++YDG ++QS L + + + +EAKSG M +H +
Sbjct: 65 IDTECTYDYLFVYDG---------DSYQSPLLASLSGKTLP---QPIEAKSGKMLLHLFS 112
Query: 285 QGKPSE-GFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLN 341
+ GFNATY CP C + C +C C G DC +C C +
Sbjct: 113 DANYNLLGFNATYTFSVCPGDCSGHGRCDVATARCQCQQGWGGLDCNTPLCSQACTQ-RG 171
Query: 342 HGTCD 346
HG CD
Sbjct: 172 HGICD 176
Score = 116 (45.9 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 39/131 (29%), Positives = 51/131 (38%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT 105
P Y C CE G+TG D +C ++ C G C + C+ C G +
Sbjct: 1084 PTSYECHCERGFTG-DGVHHCNQTCYNECRQG-----RCSGSPLFE-CE-CSLGWTSDPA 1135
Query: 106 TQ--EG--CR-KCDCNSHGNSVL--GVCDSITGECICQDNTQGKNCERCLPGYYGDPTDG 158
T G C C CN H + G+CD +C D T G +CE C PG +G
Sbjct: 1136 TLVLSGVECDVDCGCNFHSTCITAPGICD----QCQGLDWTTGPHCEHCKPGSFGSALAR 1191
Query: 159 GTCYYQCMARG 169
G C G
Sbjct: 1192 GDGCVPCQCNG 1202
Score = 98 (39.6 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 28/77 (36%), Positives = 37/77 (48%)
Query: 29 FNASLCYNKCIYGYCKGPP--DYS---CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDE 83
FNA+ ++ C G C G D + CQC+ GW G+DC+ LC+ T G GICD+
Sbjct: 121 FNATYTFSVCP-GDCSGHGRCDVATARCQCQQGWGGLDCNTP-LCSQACT-QRGHGICDK 177
Query: 84 ------CHDWTTGDHCQ 94
C G CQ
Sbjct: 178 RGLKCICSSGFVGQDCQ 194
Score = 81 (33.6 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 67/300 (22%), Positives = 102/300 (34%)
Query: 68 CNNHSTCVHGIGICDECHDWTTGDHCQY---CR-AGSYGNATTQEGCRKCD---CNSHG- 119
C + VH + C +C TT C C G Y N T C + D N H
Sbjct: 977 CRDWYDSVHSVPQCKQCTALTTCSECLQTFQCGWCGDYSNPTIGR-CLRGDWGGMNDHSA 1035
Query: 120 ---NSVLGVCDSITGEC-ICQDNTQGKNCERCLPGYYG-DPTDGGTCY-----YQCMARG 169
++ + + + G+ + E C G + P+ TC Y+C
Sbjct: 1036 VNCSTAVAELEGMEGDGDAVWSYPSCPDVEECRLGLHTCHPS--ATCVNTPTSYECHCER 1093
Query: 170 MLTGPGPQGLGSGLAERNAWEGK--DTPSRECLWIIGQSLDSNSTAPADIILLRLQPDIN 227
TG G +G+ +P EC +G + D PA ++L ++ D++
Sbjct: 1094 GFTGDGVHHCNQ-TCYNECRQGRCSGSPLFECECSLGWTSD-----PATLVLSGVECDVD 1147
Query: 228 VPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGY-EVLEAKSGVMTIHYK-Q 285
CN ++ I P G +T G C + L G +
Sbjct: 1148 CGCNFHSTCIT--APGICDQCQGLDWTT--GPHCEHCKPGSFGSALARGDGCVPCQCNGH 1203
Query: 286 GKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G P +GF C N+T QC C GP C E P + ++GTC
Sbjct: 1204 GDPLQGF------------C-HNQT---GQCYCTHHTQGPHC-ESCLPGYYGDPRDNGTC 1246
Score = 49 (22.3 bits), Expect = 7.3e-61, Sum P(2) = 7.3e-61
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 329 EEICP--NECHEFLNHGTCDLLLTGVHITH-GRTLHYQVDLIRCTCRQVYLI 377
E +CP N FL+ D G H + + H + CTCRQ Y++
Sbjct: 2105 EALCPQWNSSWSFLHCPEEDECSNGHHHCNVTQDCHDLPEGYHCTCRQGYVL 2156
Score = 47 (21.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLN 341
CP + C+ P+ +C + C +C E N
Sbjct: 2341 CPCQNNTETSSCLSSPQNDRKECYRQQCA-KCKESFN 2376
Score = 40 (19.1 bits), Expect = 6.5e-60, Sum P(2) = 6.5e-60
Identities = 6/14 (42%), Positives = 6/14 (42%)
Query: 332 CPNECHEFLNHGTC 345
CP CHE C
Sbjct: 2002 CPEPCHEIKTCSQC 2015
>UNIPROTKB|E1BPS6 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:DAAA02047205
EMBL:DAAA02047206 EMBL:DAAA02047207 EMBL:DAAA02047208
EMBL:DAAA02047209 EMBL:DAAA02047210 IPI:IPI00999849
Ensembl:ENSBTAT00000043858 Uniprot:E1BPS6
Length = 2772
Score = 583 (210.3 bits), Expect = 7.7e-57, Sum P(2) = 7.7e-57
Identities = 118/308 (38%), Positives = 162/308 (52%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTC-VHGIG 79
C C +G C GPPD++C C+LGWT CS +C CN HS C G G
Sbjct: 1101 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPLPTPAPGPPAPRCSRDCGCNFHSHCHKRGPG 1160
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CDEC DWT G+HC+ CR GS+GNAT GCR C CN HG+ G CD+++G C CQD+T
Sbjct: 1161 FCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1220
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
+G +C+ C PGYYGDP GG+C+ +C R +LT LGS GL + P
Sbjct: 1221 EGAHCQLCSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRFGGLLPAGGGAARAGP 1280
Query: 196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
C+W++ + AP + + L PD + PC + V +DG P F+ + G
Sbjct: 1281 GLSYCVWVVSATEVLQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1338
Query: 252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
QS + + FC + R V +A SG++ +H++ G S GFNA+ C P
Sbjct: 1339 VQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1397
Query: 305 CPENRTCI 312
CP + C+
Sbjct: 1398 CPVPQECV 1405
Score = 196 (74.1 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 90/346 (26%), Positives = 130/346 (37%)
Query: 31 ASLCYNKC---IYGYC-KGPPDYSCQCELGWT-GVDCSVNCLCNNHSTCVHGIGICDECH 85
A C C + +C K P + +C+ WT G C C + G G C C
Sbjct: 1139 APRCSRDCGCNFHSHCHKRGPGFCDECQ-DWTWGEHCE-RCRPGSFGNAT-GSGGCRPCQ 1195
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
GD R G N + G C C H G + D G +C
Sbjct: 1196 CNGHGDP----RRGHCDNLS---GL--CFCQDHTE---GAHCQLCSPGYYGDPRAGGSCF 1243
Query: 146 R-CLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE-CLWII 203
R C GG ++ L G + G GL + P C+W++
Sbjct: 1244 REC----------GGRALLTNVSSVAL---GSRRFG-GLLPAGGGAARAGPGLSYCVWVV 1289
Query: 204 GQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQS--TTLG 258
+ AP + + L PD + PC + V +DG P F+ + G QS + +
Sbjct: 1290 SATEVLQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GVVQSDRSLIA 1347
Query: 259 VFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCPENRTCIN 313
FC + R V +A SG++ +H++ G S GFNA+ C P CP + C+
Sbjct: 1348 AFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCPVPQECVP 1406
Query: 314 NQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGV 352
C CP GP C+ +CP C+ GTC+ L GV
Sbjct: 1407 QDGVPGAGLCRCPQGWAGPHCRMAVCPENCNAHNGAGTCNQSL-GV 1451
Score = 183 (69.5 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 39/99 (39%), Positives = 49/99 (49%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC---HDWTT 89
+C C+ G C PD+ C+C G+ G +CS C CN HS C G+G D C H+ T
Sbjct: 2149 VCAQGCVNGSCV-EPDH-CRCHFGFVGRNCSTECRCNRHSDCA-GVGARDHCLLCHNHTK 2205
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
G HC+ C G+A CR C GNS VC S
Sbjct: 2206 GSHCEQCLPLFVGSAVGGGTCRPCHAFCRGNS--HVCVS 2242
Score = 155 (59.6 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 41/118 (34%), Positives = 58/118 (49%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NA 104
P Y C C+ G+T +D +V LC C G + C + DHC+ C G G N
Sbjct: 2126 PHGYECSCKAGYT-MD-NVTGLCR--PVCAQGC-VNGSCVE---PDHCR-CHFGFVGRNC 2176
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTC 161
+T+ C CN H + GV C+ C ++T+G +CE+CLP + G GGTC
Sbjct: 2177 STE-----CRCNRHSDCA-GV--GARDHCLLCHNHTKGSHCEQCLPLFVGSAVGGGTC 2226
Score = 140 (54.3 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 45/136 (33%), Positives = 56/136 (41%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVH--GIGICDECHDWTTGDHCQYCRAGSYGN 103
P Y C C+ G+ G + CN TC+ G G+C D+T C
Sbjct: 1078 PLSYECHCQRGYQGDGVTY---CNR--TCLEDCGHGVCSGPPDFTCV--CDLGWTSDLPL 1130
Query: 104 ATTQEG-----C-RKCDCNSHGNSVL---GVCDSITGECICQDNTQGKNCERCLPGYYGD 154
T G C R C CN H + G CD CQD T G++CERC PG +G+
Sbjct: 1131 PTPAPGPPAPRCSRDCGCNFHSHCHKRGPGFCDE------CQDWTWGEHCERCRPGSFGN 1184
Query: 155 PTDGGTCY-YQCMARG 169
T G C QC G
Sbjct: 1185 ATGSGGCRPCQCNGHG 1200
Score = 53 (23.7 bits), Expect = 7.7e-57, Sum P(2) = 7.7e-57
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 301 CPDKCPENR---TCINNQ--CVCPPRRTGPDCQEEI 331
CP+ C + TC + CVC GPDC ++
Sbjct: 1432 CPENCNAHNGAGTCNQSLGVCVCAEGFGGPDCATKL 1467
Score = 39 (18.8 bits), Expect = 2.3e-55, Sum P(2) = 2.3e-55
Identities = 13/46 (28%), Positives = 15/46 (32%)
Query: 301 CPDKCPENRTCINNQCVCPPR-RTGPDCQEEICPNECHEFLNHGTC 345
C C + C+N CV P R C EC H C
Sbjct: 2146 CRPVCAQG--CVNGSCVEPDHCRCHFGFVGRNCSTECR-CNRHSDC 2188
Score = 38 (18.4 bits), Expect = 2.9e-55, Sum P(2) = 2.9e-55
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 310 TCINNQC--VCP-PRRTGPDCQEEICPNECHEFLNHGTC 345
TC ++ V P P + P CP CH N +C
Sbjct: 1962 TCFSHSLLNVSPMPVESSPPLP---CPTPCHLLPNCTSC 1997
>UNIPROTKB|F1RGK2 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:FP102452
Ensembl:ENSSSCT00000003355 Uniprot:F1RGK2
Length = 2789
Score = 583 (210.3 bits), Expect = 1.0e-56, Sum P(2) = 1.0e-56
Identities = 118/308 (38%), Positives = 162/308 (52%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTC-VHGIG 79
C C +G C GPPD++C C+LGWT CS +C CN HS C G G
Sbjct: 1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPLPTPAPGPPAPRCSRDCGCNFHSHCRKRGPG 1177
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CDEC DWT G+HC+ CR GS+GNAT GCR C CN HG+ G CD+++G C CQD+T
Sbjct: 1178 FCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1237
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
+G +C+ C PGYYGDP GG+C+ +C R +LT LGS GL + P
Sbjct: 1238 EGAHCQLCSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRVGGLLPAGGGAARAGP 1297
Query: 196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
C+W++ + AP + + L PD + PC + V +DG P F+ + G
Sbjct: 1298 GLSYCVWVVSATEVLQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1355
Query: 252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
QS + + FC + R V +A SG++ +H++ G S GFNA+ C P
Sbjct: 1356 IQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1414
Query: 305 CPENRTCI 312
CP + C+
Sbjct: 1415 CPVPQECV 1422
Score = 198 (74.8 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 91/348 (26%), Positives = 132/348 (37%)
Query: 31 ASLCYNKC---IYGYC-KGPPDYSCQCELGWT-GVDCSVNCLCNNHSTCVHGIGICDECH 85
A C C + +C K P + +C+ WT G C C + G G C C
Sbjct: 1156 APRCSRDCGCNFHSHCRKRGPGFCDECQ-DWTWGEHCE-RCRPGSFGNAT-GSGGCRPCQ 1212
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
GD R G N + G C C H G + D G +C
Sbjct: 1213 CNGHGDP----RRGHCDNLS---GL--CFCQDHTE---GAHCQLCSPGYYGDPRAGGSCF 1260
Query: 146 R-CLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE-CLWII 203
R C GG ++ L G + +G GL + P C+W++
Sbjct: 1261 REC----------GGRALLTNVSSVAL---GSRRVG-GLLPAGGGAARAGPGLSYCVWVV 1306
Query: 204 GQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQS--TTLG 258
+ AP + + L PD + PC + V +DG P F+ + G QS + +
Sbjct: 1307 SATEVLQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GVIQSDRSLIA 1364
Query: 259 VFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCPENRTCIN 313
FC + R V +A SG++ +H++ G S GFNA+ C P CP + C+
Sbjct: 1365 AFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCPVPQECVP 1423
Query: 314 NQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHI 354
C CP GP C+ +CP C+ GTC+ L GV I
Sbjct: 1424 QDGVTGAGLCQCPQGWAGPHCRMALCPENCNAHNGAGTCNQSL-GVCI 1470
Score = 182 (69.1 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 36/92 (39%), Positives = 46/92 (50%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC---HDWTT 89
+C C+ G C PD+ C+C G+ G +CS C CN HS C G+G D C H+ T
Sbjct: 2166 VCAQGCVNGSCV-EPDH-CRCHFGFVGRNCSTECRCNRHSECA-GVGARDHCLLCHNHTK 2222
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
G HC+ C G+A CR C GNS
Sbjct: 2223 GSHCEQCLPLFVGSAVGGGTCRPCHAFCRGNS 2254
Score = 154 (59.3 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 41/118 (34%), Positives = 57/118 (48%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NA 104
P Y C C+ G+T +D +V LC C G + C + DHC+ C G G N
Sbjct: 2143 PHGYECSCKTGYT-MD-NVTGLCR--PVCAQGC-VNGSCVE---PDHCR-CHFGFVGRNC 2193
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTC 161
+T+ C CN H GV C+ C ++T+G +CE+CLP + G GGTC
Sbjct: 2194 STE-----CRCNRHSECA-GV--GARDHCLLCHNHTKGSHCEQCLPLFVGSAVGGGTC 2243
Score = 140 (54.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 45/136 (33%), Positives = 56/136 (41%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVH--GIGICDECHDWTTGDHCQYCRAGSYGN 103
P Y C C+ G+ G + CN TC+ G G+C D+T C
Sbjct: 1095 PLSYECHCQRGYQGDGITY---CNR--TCLEDCGHGVCSGPPDFTCV--CDLGWTSDLPL 1147
Query: 104 ATTQEG-----C-RKCDCNSHGNSVL---GVCDSITGECICQDNTQGKNCERCLPGYYGD 154
T G C R C CN H + G CD CQD T G++CERC PG +G+
Sbjct: 1148 PTPAPGPPAPRCSRDCGCNFHSHCRKRGPGFCDE------CQDWTWGEHCERCRPGSFGN 1201
Query: 155 PTDGGTCY-YQCMARG 169
T G C QC G
Sbjct: 1202 ATGSGGCRPCQCNGHG 1217
Score = 122 (48.0 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGE-CICQD 137
+C C + + GD C+ C G + EG C KC CN H ++ C+ G C CQ+
Sbjct: 2294 VCVNCQNNSYGDKCESCLHGYF----LLEGKCTKCQCNGHADT----CNEQDGTGCPCQN 2345
Query: 138 NTQGKNCERCLPGYYGDPTDGGTCY-YQC 165
NT+ C+ G P+D CY YQC
Sbjct: 2346 NTETGTCQ----G--SSPSDRRDCYKYQC 2368
Score = 52 (23.4 bits), Expect = 1.0e-56, Sum P(2) = 1.0e-56
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 301 CPDKCPENR---TCINNQ--CVCPPRRTGPDCQEEI 331
CP+ C + TC + C+C GPDC ++
Sbjct: 1449 CPENCNAHNGAGTCNQSLGVCICAEGFGGPDCATKL 1484
Score = 52 (23.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 34 CYNKC-IYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICD 82
C C +G C P C+CE G+ G C ++ N + H + D
Sbjct: 174 CQAYCGSHGTCASPLG-PCRCEPGFLGRACDLHLWENQGAGWWHNVSAGD 222
Score = 39 (18.8 bits), Expect = 2.3e-55, Sum P(2) = 2.3e-55
Identities = 13/46 (28%), Positives = 15/46 (32%)
Query: 301 CPDKCPENRTCINNQCVCPPR-RTGPDCQEEICPNECHEFLNHGTC 345
C C + C+N CV P R C EC H C
Sbjct: 2163 CRPVCAQG--CVNGSCVEPDHCRCHFGFVGRNCSTECR-CNRHSEC 2205
Score = 38 (18.4 bits), Expect = 3.0e-55, Sum P(2) = 3.0e-55
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 310 TCINNQC--VCP-PRRTGPDCQEEICPNECHEFLNHGTC 345
TC ++ V P P + P CP CH N +C
Sbjct: 1979 TCFSHSLLNVSPMPVESSPPLP---CPTPCHLLPNCTSC 2014
>UNIPROTKB|Q7Z7M0 [details] [associations]
symbol:MEGF8 "Multiple epidermal growth factor-like domains
protein 8" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005198 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
InterPro:IPR011043 SUPFAM:SSF50965 EMBL:AB011541 EMBL:AC011497
EMBL:AC024078 EMBL:BC153880 EMBL:AY280362 IPI:IPI00027310
IPI:IPI00607580 PIR:T00209 RefSeq:NP_001258867.1 RefSeq:NP_001401.2
UniGene:Hs.132483 ProteinModelPortal:Q7Z7M0 SMR:Q7Z7M0
IntAct:Q7Z7M0 MINT:MINT-2808456 STRING:Q7Z7M0 PhosphoSite:Q7Z7M0
DMDM:218511690 PaxDb:Q7Z7M0 PRIDE:Q7Z7M0 Ensembl:ENST00000251268
Ensembl:ENST00000334370 GeneID:1954 KEGG:hsa:1954 UCSC:uc002otl.4
UCSC:uc002otm.4 CTD:1954 GeneCards:GC19P042829 HGNC:HGNC:3233
HPA:HPA049248 MIM:604267 neXtProt:NX_Q7Z7M0 PharmGKB:PA27666
eggNOG:NOG304142 HOGENOM:HOG000113554 HOVERGEN:HBG108128
OMA:GHSMVFH ChiTaRS:MEGF8 GenomeRNAi:1954 NextBio:7919
ArrayExpress:Q7Z7M0 Bgee:Q7Z7M0 CleanEx:HS_MEGF8
Genevestigator:Q7Z7M0 GermOnline:ENSG00000105429 Uniprot:Q7Z7M0
Length = 2845
Score = 584 (210.6 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 117/308 (37%), Positives = 163/308 (52%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTC-VHGIG 79
C C +G C GPPD++C C+LGWT CS +C C+ HS C G G
Sbjct: 1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCSFHSHCRKRGPG 1177
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CDEC DWT G+HC+ CR GS+GNAT GCR C CN HG+ G CD+++G C CQD+T
Sbjct: 1178 FCDECQDWTWGEHCERCRPGSFGNATGSRGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1237
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
+G +C+ C PGYYGDP GG+C+ +C R +LT LGS GL + P
Sbjct: 1238 EGAHCQLCSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRVGGLLPPGGGAARAGP 1297
Query: 196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
C+W++ + + AP + + L PD + PC + V +DG P F+ + G
Sbjct: 1298 GLSYCVWVVSATEELQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1355
Query: 252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
QS + + FC + R V +A SG++ +H++ G S GFNA+ C P
Sbjct: 1356 VQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1414
Query: 305 CPENRTCI 312
CP + C+
Sbjct: 1415 CPVPQECV 1422
Score = 201 (75.8 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 52/173 (30%), Positives = 80/173 (46%)
Query: 199 CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQS- 254
C+W++ + + AP + + L PD + PC + V +DG P F+ + G QS
Sbjct: 1302 CVWVVSATEELQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GVVQSD 1359
Query: 255 -TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCPEN 308
+ + FC + R V +A SG++ +H++ G S GFNA+ C P CP
Sbjct: 1360 RSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCPVP 1418
Query: 309 RTCINNQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHI 354
+ C+ C CP GP C+ +CP C+ GTC+ L GV I
Sbjct: 1419 QECVPQDGAAGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGTCNQSL-GVCI 1470
Score = 174 (66.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 35/92 (38%), Positives = 45/92 (48%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC---HDWTT 89
+C C+ G C PD+ C+C G+ G +CS C CN HS C G+G D C + T
Sbjct: 2222 VCAQGCVNGSCV-EPDH-CRCHFGFVGRNCSTECRCNRHSECA-GVGARDHCLLCRNHTK 2278
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
G HC+ C G+A CR C GNS
Sbjct: 2279 GSHCEQCLPLFVGSAVGGGTCRPCHAFCRGNS 2310
Score = 152 (58.6 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NA 104
P Y C C+ G+T +D ++ LC C G + C + DHC+ C G G N
Sbjct: 2199 PHGYECSCKTGYT-MD-NMTGLCR--PVCAQGC-VNGSCVE---PDHCR-CHFGFVGRNC 2249
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTC 161
+T+ C CN H GV C+ C+++T+G +CE+CLP + G GGTC
Sbjct: 2250 STE-----CRCNRHSECA-GV--GARDHCLLCRNHTKGSHCEQCLPLFVGSAVGGGTC 2299
Score = 129 (50.5 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 44/136 (32%), Positives = 55/136 (40%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVH--GIGICDECHDWTTGDHCQYCRAGSYGN 103
P Y C C+ G+ G S CN TC+ G G+C D+T C
Sbjct: 1095 PLSYECHCQRGYQGDGISH---CNR--TCLEDCGHGVCSGPPDFTCV--CDLGWTSDLPP 1147
Query: 104 ATTQEG-----C-RKCDCNSHGNSVL---GVCDSITGECICQDNTQGKNCERCLPGYYGD 154
T G C R C C+ H + G CD CQD T G++CERC PG +G+
Sbjct: 1148 PTPAPGPPAPRCSRDCGCSFHSHCRKRGPGFCDE------CQDWTWGEHCERCRPGSFGN 1201
Query: 155 PTDGGTCY-YQCMARG 169
T C QC G
Sbjct: 1202 ATGSRGCRPCQCNGHG 1217
Score = 51 (23.0 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 301 CPDKCPENR---TCINNQ--CVCPPRRTGPDCQEEI 331
CP+ C + TC + C+C GPDC ++
Sbjct: 1449 CPENCNAHTGAGTCNQSLGVCICAEGFGGPDCATKL 1484
Score = 39 (18.8 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 13/46 (28%), Positives = 15/46 (32%)
Query: 301 CPDKCPENRTCINNQCVCPPR-RTGPDCQEEICPNECHEFLNHGTC 345
C C + C+N CV P R C EC H C
Sbjct: 2219 CRPVCAQG--CVNGSCVEPDHCRCHFGFVGRNCSTECR-CNRHSEC 2261
Score = 38 (18.4 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 310 TCINNQC--VCP-PRRTGPDCQEEICPNECHEFLNHGTC 345
TC ++ V P P + P CP CH N +C
Sbjct: 2035 TCFSHSLLNVSPMPVESSPPLP---CPTPCHLLPNCTSC 2070
>UNIPROTKB|E2RM39 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:AAEX03000913
EMBL:AAEX03000914 Ensembl:ENSCAFT00000007776 Uniprot:E2RM39
Length = 2787
Score = 582 (209.9 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 119/308 (38%), Positives = 162/308 (52%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTC-VHGIG 79
C C +G C GPPD++C C+LGWT CS +C CN HS C G G
Sbjct: 1117 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCNFHSHCRKRGPG 1176
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CDEC DWT G+HC+ CR GS+GNAT GCR C CN HG+ G CD+++G C CQD+T
Sbjct: 1177 FCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1236
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
+G +C+ C PGYYGDP GG+C+ +C R +LT LGS GL + P
Sbjct: 1237 EGAHCQFCSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRVGGLLPPGGGAARAGP 1296
Query: 196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
C+W++ + AP + + L PD + PC + V +DG P F+ + G
Sbjct: 1297 GLSYCVWVVSATEVLQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1354
Query: 252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
QS + + FC + R V +A SG++ +H++ G S GFNA+ C P
Sbjct: 1355 VQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1413
Query: 305 CPENRTCI 312
CP + CI
Sbjct: 1414 CPVPQECI 1421
Score = 196 (74.1 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 53/173 (30%), Positives = 79/173 (45%)
Query: 199 CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQS- 254
C+W++ + AP + + L PD + PC + V +DG P F+ + G QS
Sbjct: 1301 CVWVVSATEVLQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GVVQSD 1358
Query: 255 -TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCPEN 308
+ + FC + R V +A SG++ +H++ G S GFNA+ C P CP
Sbjct: 1359 RSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCPVP 1417
Query: 309 RTCINNQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHI 354
+ CI C CP GP C+ +CP C+ GTC+ L GV I
Sbjct: 1418 QECIPQDGATGAGLCRCPQGWAGPHCRMALCPENCNAHSGAGTCNQSL-GVCI 1469
Score = 175 (66.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 38/99 (38%), Positives = 48/99 (48%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC---HDWTT 89
+C C+ G C PD+ C+C G+ G +CS C CN HS C G+G D C + T
Sbjct: 2164 VCAQGCVNGSCV-EPDH-CRCHFGFVGRNCSTECRCNRHSECA-GVGARDHCLLCRNHTK 2220
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
G HC+ C G+A CR C GNS VC S
Sbjct: 2221 GSHCEQCLPLFVGSAVGGGTCRPCHAFCRGNS--HVCVS 2257
Score = 155 (59.6 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 41/118 (34%), Positives = 58/118 (49%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NA 104
P Y C C+ G+T +D +V LC C G + C + DHC+ C G G N
Sbjct: 2141 PHGYECSCKAGYT-MD-NVTGLCR--PVCAQGC-VNGSCVE---PDHCR-CHFGFVGRNC 2191
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTC 161
+T+ C CN H GV C+ C+++T+G +CE+CLP + G GGTC
Sbjct: 2192 STE-----CRCNRHSECA-GV--GARDHCLLCRNHTKGSHCEQCLPLFVGSAVGGGTC 2241
Score = 141 (54.7 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 45/136 (33%), Positives = 56/136 (41%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVH--GIGICDECHDWTTGDHCQYCRAGSYGN 103
P Y C C+ G+ G + CN TC+ G G+C D+T C
Sbjct: 1094 PLSYECHCQRGYQGDGITY---CNR--TCLEDCGHGVCSGPPDFTCV--CDLGWTSDLPP 1146
Query: 104 ATTQEG-----C-RKCDCNSHGNSVL---GVCDSITGECICQDNTQGKNCERCLPGYYGD 154
T G C R C CN H + G CD CQD T G++CERC PG +G+
Sbjct: 1147 PTPAPGPPAPRCSRDCGCNFHSHCRKRGPGFCDE------CQDWTWGEHCERCRPGSFGN 1200
Query: 155 PTDGGTCY-YQCMARG 169
T G C QC G
Sbjct: 1201 ATGSGGCRPCQCNGHG 1216
Score = 128 (50.1 bits), Expect = 0.00032, P = 0.00032
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 272 LEAKSGVMTIH-YKQGKPSE-GFNATYQIFSCPDKCPENRTC-INNQCVCPPRRTGPDCQ 328
+EA SG M +H + + GFNA+Y+ CP C + C C C P GPDC
Sbjct: 110 IEASSGKMLLHLFSDANYNLLGFNASYRFTLCPGGCSGHGQCQAPGVCTCEPGWGGPDCS 169
Query: 329 EEICPNECHEFLNHGTC 345
+ CP C +HGTC
Sbjct: 170 LQECPAYCG---SHGTC 183
Score = 51 (23.0 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 301 CPDKCPENR---TCINNQ--CVCPPRRTGPDCQEEI 331
CP+ C + TC + C+C GPDC ++
Sbjct: 1448 CPENCNAHSGAGTCNQSLGVCICAEGFGGPDCATKL 1483
Score = 39 (18.8 bits), Expect = 3.0e-55, Sum P(2) = 3.0e-55
Identities = 13/46 (28%), Positives = 15/46 (32%)
Query: 301 CPDKCPENRTCINNQCVCPPR-RTGPDCQEEICPNECHEFLNHGTC 345
C C + C+N CV P R C EC H C
Sbjct: 2161 CRPVCAQG--CVNGSCVEPDHCRCHFGFVGRNCSTECR-CNRHSEC 2203
Score = 38 (18.4 bits), Expect = 3.8e-55, Sum P(2) = 3.8e-55
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 310 TCINNQC--VCP-PRRTGPDCQEEICPNECHEFLNHGTC 345
TC ++ V P P + P CP CH N +C
Sbjct: 1977 TCFSHSLLNVSPMPVESSPPLP---CPTPCHLLPNCTSC 2012
>RGD|621190 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0060287 "epithelial cilium movement
involved in determination of left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621190 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 eggNOG:NOG304142 HOGENOM:HOG000113554
HOVERGEN:HBG108128 OrthoDB:EOG4JHCDR EMBL:AABR03001918
EMBL:AABR03001941 EMBL:AABR03004237 EMBL:AB011534 IPI:IPI00766905
UniGene:Rn.21378 ProteinModelPortal:Q9QYP0 IntAct:Q9QYP0
STRING:Q9QYP0 PhosphoSite:Q9QYP0 PRIDE:Q9QYP0
Ensembl:ENSRNOT00000027831 UCSC:RGD:621190 InParanoid:Q9QYP0
Genevestigator:Q9QYP0 Uniprot:Q9QYP0
Length = 2788
Score = 580 (209.2 bits), Expect = 2.7e-56, Sum P(2) = 2.7e-56
Identities = 118/308 (38%), Positives = 162/308 (52%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVH-GIG 79
C C +G C GPPD++C C+LGWT CS +C CN HS C G G
Sbjct: 1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCNFHSHCRRRGPG 1177
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CDEC DWT G+HC+ CR GS+GNAT GCR C CN HG+ G CD+++G C CQD+T
Sbjct: 1178 YCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHT 1237
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
+G +C+ C PGYYGDP GG+C+ +C R +LT LGS GL + P
Sbjct: 1238 EGAHCQICSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRFGGLLPPGGGTARAGP 1297
Query: 196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
C+W++ + AP + + L PD + PC + V +DG P F+ + G
Sbjct: 1298 GLSYCVWVVSATEALQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1355
Query: 252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
QS + + FC + R V +A SG++ +H++ G S GFNA+ C P
Sbjct: 1356 VQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1414
Query: 305 CPENRTCI 312
CP + C+
Sbjct: 1415 CPVPQECV 1422
Score = 195 (73.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 91/348 (26%), Positives = 130/348 (37%)
Query: 31 ASLCYNKC---IYGYCKGP-PDYSCQCELGWT-GVDCSVNCLCNNHSTCVHGIGICDECH 85
A C C + +C+ P Y +C+ WT G C C + G G C C
Sbjct: 1156 APRCSRDCGCNFHSHCRRRGPGYCDECQ-DWTWGEHCE-RCRPGSFGNAT-GSGGCRPCQ 1212
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
GD R G N + G C C H G I D G +C
Sbjct: 1213 CNGHGDP----RRGHCDNLS---GL--CFCQDHTE---GAHCQICSPGYYGDPRAGGSCF 1260
Query: 146 R-CLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE-CLWII 203
R C GG ++ L G + G GL + P C+W++
Sbjct: 1261 REC----------GGRALLTNVSSVAL---GSRRFG-GLLPPGGGTARAGPGLSYCVWVV 1306
Query: 204 GQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQS--TTLG 258
+ AP + + L PD + PC + V +DG P F+ + G QS + +
Sbjct: 1307 SATEALQPCAPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GVVQSDRSLIA 1364
Query: 259 VFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCPENRTCIN 313
FC + R V +A SG++ +H++ G S GFNA+ C P CP + C+
Sbjct: 1365 AFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCPVPQECVP 1423
Query: 314 NQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHI 354
C CP GP C+ +CP C+ G C+ L GV I
Sbjct: 1424 QDGAAGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGICNQSL-GVCI 1470
Score = 174 (66.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 38/99 (38%), Positives = 48/99 (48%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC---HDWTT 89
+C C+ G C PD+ C+C G+ G +CS C CN HS C G+G D C + T
Sbjct: 2165 VCAQGCVNGSCV-EPDH-CRCHFGFVGRNCSTECRCNRHSECA-GVGARDHCLLCRNHTK 2221
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
G HC+ C G+A CR C GNS VC S
Sbjct: 2222 GSHCEQCLPLFVGSALGGGTCRPCHAFCRGNS--HVCVS 2258
Score = 151 (58.2 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NA 104
P Y C C+ G+T +D +V +C C G + C + DHC+ C G G N
Sbjct: 2142 PHGYECSCKTGYT-MD-NVTGVCR--PVCAQGC-VNGSCVE---PDHCR-CHFGFVGRNC 2192
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTC 161
+T+ C CN H GV C+ C+++T+G +CE+CLP + G GGTC
Sbjct: 2193 STE-----CRCNRHSECA-GV--GARDHCLLCRNHTKGSHCEQCLPLFVGSALGGGTC 2242
Score = 142 (55.0 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 45/136 (33%), Positives = 57/136 (41%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVH--GIGICDECHDWTTGDHCQYCRAGSYGN 103
P Y C C+ G+ G D +C + TC+ G G+C D+T C
Sbjct: 1095 PLSYECHCQRGYQG-DGITHC----NRTCLEDCGHGVCSGPPDFTCV--CDLGWTSDLPP 1147
Query: 104 ATTQEG-----C-RKCDCNSHGNSVL---GVCDSITGECICQDNTQGKNCERCLPGYYGD 154
T G C R C CN H + G CD CQD T G++CERC PG +G+
Sbjct: 1148 PTPAPGPPAPRCSRDCGCNFHSHCRRRGPGYCDE------CQDWTWGEHCERCRPGSFGN 1201
Query: 155 PTDGGTCY-YQCMARG 169
T G C QC G
Sbjct: 1202 ATGSGGCRPCQCNGHG 1217
Score = 51 (23.0 bits), Expect = 2.7e-56, Sum P(2) = 2.7e-56
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 301 CPDKCPENRTC-INNQ----CVCPPRRTGPDCQEEI 331
CP+ C + I NQ C+C GPDC ++
Sbjct: 1449 CPENCNAHTGAGICNQSLGVCICAEGFGGPDCATKL 1484
Score = 39 (18.8 bits), Expect = 4.9e-55, Sum P(2) = 4.9e-55
Identities = 13/46 (28%), Positives = 15/46 (32%)
Query: 301 CPDKCPENRTCINNQCVCPPR-RTGPDCQEEICPNECHEFLNHGTC 345
C C + C+N CV P R C EC H C
Sbjct: 2162 CRPVCAQG--CVNGSCVEPDHCRCHFGFVGRNCSTECR-CNRHSEC 2204
Score = 38 (18.4 bits), Expect = 6.2e-55, Sum P(2) = 6.2e-55
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 310 TCINNQC--VCP-PRRTGPDCQEEICPNECHEFLNHGTC 345
TC ++ V P P + P CP CH N +C
Sbjct: 1978 TCFSHSLLNVSPMPVESSPPLP---CPTPCHLLPNCTSC 2013
>MGI|MGI:2446294 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0060287
"epithelial cilium movement involved in determination of left/right
asymmetry" evidence=IMP] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO;IMP] [GO:0071907 "determination
of digestive tract left/right asymmetry" evidence=ISO;IMP]
[GO:1900164 "nodal signaling pathway involved in determination of
lateral mesoderm left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:2446294 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 CTD:1954 eggNOG:NOG304142
HOVERGEN:HBG108128 OMA:GHSMVFH EMBL:EU723517 EMBL:BC031185
EMBL:BC036727 EMBL:BC051121 EMBL:BC060277 EMBL:AK122377
EMBL:AK030408 IPI:IPI00930841 RefSeq:NP_001153872.1
UniGene:Mm.38527 ProteinModelPortal:P60882 SMR:P60882
PhosphoSite:P60882 PaxDb:P60882 PRIDE:P60882
Ensembl:ENSMUST00000128119 GeneID:269878 KEGG:mmu:269878
UCSC:uc009fsj.2 InParanoid:B3GR00 OrthoDB:EOG4JHCDR NextBio:393077
Bgee:P60882 CleanEx:MM_MEGF8 Genevestigator:P60882
GermOnline:ENSMUSG00000045039 Uniprot:P60882
Length = 2789
Score = 575 (207.5 bits), Expect = 9.0e-56, Sum P(2) = 9.0e-56
Identities = 117/308 (37%), Positives = 161/308 (52%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVH-GIG 79
C C +G C GPPD++C C+LGWT CS +C C+ HS C G G
Sbjct: 1118 CLEDCGHGVCSGPPDFTCVCDLGWTSDLPPPTPAPGPPAPRCSRDCGCSFHSHCRRRGPG 1177
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CDEC DWT G+HC+ CR GS+GNAT GCR C CN HG+ G CD++TG C CQD+T
Sbjct: 1178 YCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLTGLCFCQDHT 1237
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS----GLAERNAWEGKDTP 195
+G +C+ C PGYYGDP GG+C+ +C R +LT LGS GL + P
Sbjct: 1238 EGAHCQICSPGYYGDPRAGGSCFRECGGRALLTNVSSVALGSRRFGGLLPPGGGAARAGP 1297
Query: 196 SRE-CLWIIGQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
C+W++ + P + + L PD + PC + V +DG P F+ + G
Sbjct: 1298 GLSYCVWVVSATEALQPCVPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GV 1355
Query: 252 HQS--TTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDK 304
QS + + FC + R V +A SG++ +H++ G S GFNA+ C P
Sbjct: 1356 VQSDRSLIAAFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGS 1414
Query: 305 CPENRTCI 312
CP + C+
Sbjct: 1415 CPVPQECV 1422
Score = 195 (73.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 91/348 (26%), Positives = 129/348 (37%)
Query: 31 ASLCYNKC---IYGYCKGP-PDYSCQCELGWT-GVDCSVNCLCNNHSTCVHGIGICDECH 85
A C C + +C+ P Y +C+ WT G C C + G G C C
Sbjct: 1156 APRCSRDCGCSFHSHCRRRGPGYCDECQ-DWTWGEHCE-RCRPGSFGNAT-GSGGCRPCQ 1212
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
GD R G N T G C C H G I D G +C
Sbjct: 1213 CNGHGDP----RRGHCDNLT---GL--CFCQDHTE---GAHCQICSPGYYGDPRAGGSCF 1260
Query: 146 R-CLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE-CLWII 203
R C GG ++ L G + G GL + P C+W++
Sbjct: 1261 REC----------GGRALLTNVSSVAL---GSRRFG-GLLPPGGGAARAGPGLSYCVWVV 1306
Query: 204 GQSLDSNSTAPADI---ILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQS--TTLG 258
+ P + + L PD + PC + V +DG P F+ + G QS + +
Sbjct: 1307 SATEALQPCVPGTLCPPLTLTFSPDSSTPCTLSYVLAFDGFPRFLDT--GVVQSDRSLIA 1364
Query: 259 VFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPSEGFNATYQIFSC----PDKCPENRTCIN 313
FC + R V +A SG++ +H++ G S GFNA+ C P CP + C+
Sbjct: 1365 AFCGQRRDRPLTV-QALSGLLVLHWEANGSSSWGFNASVGSARCGSGGPGSCPVPQECVP 1423
Query: 314 NQ-------CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHI 354
C CP GP C+ +CP C+ G C+ L GV I
Sbjct: 1424 QDGAAGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGICNQSL-GVCI 1470
Score = 174 (66.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 38/99 (38%), Positives = 48/99 (48%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC---HDWTT 89
+C C+ G C PD+ C+C G+ G +CS C CN HS C G+G D C + T
Sbjct: 2166 VCAQGCVNGSCV-EPDH-CRCHFGFVGRNCSTECRCNRHSECA-GVGAQDHCLLCRNHTK 2222
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
G HC+ C G+A CR C GNS VC S
Sbjct: 2223 GSHCEQCLPLFVGSALGGGTCRPCHAFCRGNS--HVCVS 2259
Score = 151 (58.2 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NA 104
P Y C C+ G+T +D +V +C C G + C + DHC+ C G G N
Sbjct: 2143 PHGYECSCKTGYT-MD-NVTGVCR--PVCAQGC-VNGSCVE---PDHCR-CHFGFVGRNC 2193
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTC 161
+T+ C CN H GV C+ C+++T+G +CE+CLP + G GGTC
Sbjct: 2194 STE-----CRCNRHSECA-GV--GAQDHCLLCRNHTKGSHCEQCLPLFVGSALGGGTC 2243
Score = 137 (53.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 44/136 (32%), Positives = 57/136 (41%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVH--GIGICDECHDWTTGDHCQYCRAGSYGN 103
P Y C C+ G+ G D +C + TC+ G G+C D+T C
Sbjct: 1095 PLSYECHCQRGYQG-DGITHC----NRTCLEDCGHGVCSGPPDFTCV--CDLGWTSDLPP 1147
Query: 104 ATTQEG-----C-RKCDCNSHGNSVL---GVCDSITGECICQDNTQGKNCERCLPGYYGD 154
T G C R C C+ H + G CD CQD T G++CERC PG +G+
Sbjct: 1148 PTPAPGPPAPRCSRDCGCSFHSHCRRRGPGYCDE------CQDWTWGEHCERCRPGSFGN 1201
Query: 155 PTDGGTCY-YQCMARG 169
T G C QC G
Sbjct: 1202 ATGSGGCRPCQCNGHG 1217
Score = 51 (23.0 bits), Expect = 9.0e-56, Sum P(2) = 9.0e-56
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 301 CPDKCPENRTC-INNQ----CVCPPRRTGPDCQEEI 331
CP+ C + I NQ C+C GPDC ++
Sbjct: 1449 CPENCNAHTGAGICNQSLGVCICAEGFGGPDCATKL 1484
Score = 39 (18.8 bits), Expect = 1.6e-54, Sum P(2) = 1.6e-54
Identities = 13/46 (28%), Positives = 15/46 (32%)
Query: 301 CPDKCPENRTCINNQCVCPPR-RTGPDCQEEICPNECHEFLNHGTC 345
C C + C+N CV P R C EC H C
Sbjct: 2163 CRPVCAQG--CVNGSCVEPDHCRCHFGFVGRNCSTECR-CNRHSEC 2205
Score = 38 (18.4 bits), Expect = 2.1e-54, Sum P(2) = 2.1e-54
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 310 TCINNQC--VCP-PRRTGPDCQEEICPNECHEFLNHGTC 345
TC ++ V P P + P CP CH N +C
Sbjct: 1979 TCFSHSLLNVSPMPVESSPPLP---CPTPCHLLPNCTSC 2014
>MGI|MGI:99909 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005608 "laminin-3 complex" evidence=ISO] [GO:0005610
"laminin-5 complex" evidence=IDA] [GO:0005913 "cell-cell adherens
junction" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0030056
"hemidesmosome" evidence=ISO] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031581 "hemidesmosome assembly" evidence=ISO]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:99909 GO:GO:0030155 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOVERGEN:HBG052300 GO:GO:0005610 EMBL:AJ293592
EMBL:U88353 EMBL:X84014 EMBL:X84013 EMBL:L20478 IPI:IPI00125058
IPI:IPI00988354 UniGene:Mm.42012 ProteinModelPortal:Q61789
SMR:Q61789 STRING:Q61789 PhosphoSite:Q61789 PaxDb:Q61789
PRIDE:Q61789 UCSC:uc008ecf.2 UCSC:uc008ech.1 HOGENOM:HOG000048708
CleanEx:MM_LAMA3 Genevestigator:Q61789
GermOnline:ENSMUSG00000024421 Uniprot:Q61789
Length = 3333
Score = 275 (101.9 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 71/173 (41%), Positives = 83/173 (47%)
Query: 43 CKGPPDY---SCQ-CELG--WTG----VDCSVNCLCNNHST-CVHGIGICDECHDWTTGD 91
C PPDY SCQ C G W V V C CN HS C G GIC C T G+
Sbjct: 1654 CACPPDYTGDSCQGCRPGYYWDNKSLPVGRCVPCNCNGHSNRCQDGSGICINCQHNTAGE 1713
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC--DSITGECICQDNTQGKNCERCLP 149
HC+ C+AG YGNA CR C C H NS C D C C+ G CERC P
Sbjct: 1714 HCERCQAGHYGNAI-HGSCRVCPC-PHTNSFATGCAVDGGAVRCACKPGYTGTQCERCAP 1771
Query: 150 GYYGDPTD-GGTCY-YQCMARGMLTGPGPQGLGSGLAERNAWEGKD-TPSREC 199
GY+G+P GG+C C + G L GP G + + E KD +P+ EC
Sbjct: 1772 GYFGNPQKFGGSCQPCNCNSNGQL-GPCDPLTGDCVNQ----EPKDGSPAEEC 1819
Score = 158 (60.7 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 45/149 (30%), Positives = 59/149 (39%)
Query: 39 IYGYCKGPPDY---SCQ-CELGWTG----VDCSVNCLCNNHSTCVHGIGICDE------C 84
+ G C PP C+ CE+ C V C C+ T + CD C
Sbjct: 1320 VTGKCLCPPHTVRPQCEVCEMNSFNFHPVAGCDV-CNCSRKGTIEAAVSECDRDSGQCRC 1378
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
TG C C G C C CN G VCD TG C+C++N +G C
Sbjct: 1379 KPRVTGQQCDKCAPGLL---PVPLKCVPCSCNRDGTEP-SVCDPETGACMCKENVEGPQC 1434
Query: 145 ERCLPG-YYGDPTDGGTCYYQCMARGMLT 172
+ C G +Y DPT+ C +C G+ T
Sbjct: 1435 QLCREGSFYLDPTNPKGCT-KCFCFGVNT 1462
Score = 139 (54.0 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 62 CSVNCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCD 114
CS C C+ T + GIG C + C TGD C C G + + GC+ C
Sbjct: 625 CS-ECQCHEAGT-LSGIGECGQEDGDCSCKAHVTGDACDTCEDGFFSLEKSNYFGCQGCQ 682
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ G ++ +C +G C C+++ +GK C+R YY
Sbjct: 683 CDI-GGALTTMCSGPSGVCQCREHVEGKQCQRPENNYY 719
Score = 133 (51.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 33/105 (31%), Positives = 44/105 (41%)
Query: 66 CLCNNHSTCVHGIGICDE-----CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN 120
C CN ICD+ C G C CR+GSY C+ C C++ G+
Sbjct: 488 CDCNLEGVLPE---ICDDRGRCLCRPGVEGPQCDSCRSGSYSFPI----CQACQCSTIGS 540
Query: 121 SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT---DGGTCY 162
+ CD G+C C G+ C+RCL G Y P G C+
Sbjct: 541 YPVP-CDPGNGQCDCLPGITGRQCDRCLSGAYDFPYCQGSGSVCH 584
Score = 125 (49.1 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 28/83 (33%), Positives = 35/83 (42%)
Query: 77 GIGICDECHDWTTGDHCQYCRAGSY---G-NATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
G G+C C T G +C+ C G + G GC C C+ CD +G
Sbjct: 383 GGGVCINCQHNTAGVNCEKCAKGYFRPHGVPVDALHGCIPCSCDPERADD---CDQGSGH 439
Query: 133 CICQDNTQGKNCERCLPGYYGDP 155
C C+ N G CE C GYY P
Sbjct: 440 CHCKPNFSGDYCETCADGYYNFP 462
Score = 96 (38.9 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 25/69 (36%), Positives = 30/69 (43%)
Query: 113 CDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGML 171
CDCN G VL +CD G C+C+ +G C+ C G Y P C QC G
Sbjct: 488 CDCNLEG--VLPEICDD-RGRCLCRPGVEGPQCDSCRSGSYSFPICQA-C--QCSTIGSY 541
Query: 172 TGPGPQGLG 180
P G G
Sbjct: 542 PVPCDPGNG 550
Score = 80 (33.2 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 26/74 (35%), Positives = 32/74 (43%)
Query: 61 DCSVN--CLCNNHSTCVHGIGI-----CDECHDWTTGDHCQYCRAGSYGNA----TTQEG 109
D SV C+CN H+ C EC T GD C C AG Y QE
Sbjct: 289 DISVGGRCVCNGHAEACSADNPEKQFRC-ECQHHTCGDTCNRCCAG-YNQRRWQPAGQEQ 346
Query: 110 CRKCD-CNSHGNSV 122
+C+ CN HG++V
Sbjct: 347 HNECEACNCHGHAV 360
Score = 67 (28.6 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDL 347
P C R C + +C+CPP P C E+C F CD+
Sbjct: 1309 PCNCGR-RLCEEVTGKCLCPPHTVRPQC--EVCEMNSFNFHPVAGCDV 1353
Score = 53 (23.7 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 309 RTCINNQCVCPPRRTGPDCQ 328
R + C CPP TG CQ
Sbjct: 1647 RAHLVEMCACPPDYTGDSCQ 1666
Score = 49 (22.3 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 313 NNQCVCPPRRTGPDCQE 329
+ QC C PR TG C +
Sbjct: 1373 SGQCRCKPRVTGQQCDK 1389
Score = 47 (21.6 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEF 339
N QC C P TG C C + ++F
Sbjct: 549 NGQCDCLPGITGRQCDR--CLSGAYDF 573
Score = 43 (20.2 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 214 PADIILLRLQPDINV 228
P D++LL QPD+ +
Sbjct: 1546 PGDMVLLGKQPDVQL 1560
Score = 42 (19.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 315 QCVCPPRRTGPDCQ 328
+C C P TG C+
Sbjct: 1754 RCACKPGYTGTQCE 1767
>UNIPROTKB|F1MDD5 [details] [associations]
symbol:Bt.12589 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:DAAA02056591
EMBL:DAAA02056592 EMBL:DAAA02056593 EMBL:DAAA02056594
EMBL:DAAA02056595 EMBL:DAAA02056596 EMBL:DAAA02056597
EMBL:DAAA02056598 EMBL:DAAA02056599 EMBL:DAAA02056600
EMBL:DAAA02056601 EMBL:DAAA02056602 IPI:IPI00686590
Ensembl:ENSBTAT00000060991 ArrayExpress:F1MDD5 Uniprot:F1MDD5
Length = 3242
Score = 256 (95.2 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 70/177 (39%), Positives = 85/177 (48%)
Query: 43 CKGPPDY---SCQ-CELGW----TGVDCS--VNCLCNNHST-CVHGIGICDECHDWTT-- 89
C PPDY SCQ C G+ G+ V C CN HS C G GIC EC T
Sbjct: 1558 CACPPDYTGDSCQGCSPGYYRENKGLYTGWCVPCNCNGHSNRCQDGSGICIECSSGMTIR 1617
Query: 90 -GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE---CICQDNTQGKNCE 145
G+HC+ C+ GSY N T CR C C H +S C +TGE C C+ G CE
Sbjct: 1618 GGEHCERCKEGSYWN-TIHGSCRVCPC-PHSDSFATGC-VVTGENVKCSCKPGYTGTRCE 1674
Query: 146 RCLPGYYGDPTD-GGTCY-YQCMARGMLTGPGPQGLGSGLAERNAWEGKDT-PSREC 199
RC PGY+G+P GG+C C + G L P G + + E KD+ P EC
Sbjct: 1675 RCAPGYFGNPQKFGGSCQPCNCNSNGQLGSCDPLN-GDCINQ----EPKDSGPGEEC 1726
Score = 150 (57.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 41/126 (32%), Positives = 51/126 (40%)
Query: 47 PDYSCQ-CELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNA 104
P C+ C TG D + C+ +H C C TG C C G Y
Sbjct: 1253 PLAGCEGCNCSRTGTDGTTTPECDGDHGQC--------RCRPRITGRQCDRCAPGFY--- 1301
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG-YYGDPTDGGTCYY 163
E C C C+ G GVCD TG C+C++N QG C C G +Y DP + C
Sbjct: 1302 RFPE-CLPCHCSRDGTEP-GVCDPGTGACLCKENVQGTECNMCREGSFYLDPANPKGCT- 1358
Query: 164 QCMARG 169
C G
Sbjct: 1359 SCFCFG 1364
Score = 138 (53.6 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 29/84 (34%), Positives = 39/84 (46%)
Query: 77 GIGICDECHDWTTGDHCQYCRAG---SYGNAT-TQEGCRKCDCN-SHGNSVLGVCDSITG 131
G G+C C T G +C+ C G YG +GC C C+ H C+ +G
Sbjct: 289 GGGVCINCQHNTAGVNCEKCAKGYYRPYGIPVHAPDGCIPCSCHPEHAED----CEQGSG 344
Query: 132 ECICQDNTQGKNCERCLPGYYGDP 155
C C+ N +G +CE C GYY P
Sbjct: 345 RCTCRPNFRGDHCEECAAGYYHFP 368
Score = 134 (52.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 33/98 (33%), Positives = 46/98 (46%)
Query: 62 CSVNCLCNNHSTCVHGIGICDE----CH--DWTTGDHCQYCRAGSYG-NATTQEGCRKCD 114
CS C C+ T + GIG C + CH GD C C G + + GC+ C
Sbjct: 532 CS-ECRCHVAGT-MSGIGECGQLDGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQ 589
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ G +V VC +G C C+++ GK C+R YY
Sbjct: 590 CDI-GGAVTPVCSGRSGVCQCREHVVGKACQRPENNYY 626
Score = 134 (52.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 41/146 (28%), Positives = 65/146 (44%)
Query: 46 PPDYSCQCELGWTGVDCSVNCL--CNNHSTCVHGIGICDECH--DWTTGDHCQ---YCRA 98
P C+C+ G TG C CL ++ C +CD D + G HCQ + +
Sbjct: 454 PVTGQCECQPGITGQRCD-RCLSGASDFPHCQGSSNVCDPAGTVDSSLG-HCQCKLHVES 511
Query: 99 GS-------YGNATTQ--EGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQGKNCERCL 148
S Y N + +GC +C C+ G S +G C + G+C C+ + G +C+ C
Sbjct: 512 PSCSICKPLYWNLAKENPDGCSECRCHVAGTMSGIGECGQLDGDCHCKSHVGGDSCDTCE 571
Query: 149 PGYYG-DPTDGGTCY-YQCMARGMLT 172
GY+ + ++ C QC G +T
Sbjct: 572 DGYFALEKSNYFGCQGCQCDIGGAVT 597
Score = 133 (51.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 48/157 (30%), Positives = 61/157 (38%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
KC GY + P G + CS C + C G G C C GDHC+ C
Sbjct: 307 KCAKGYYR-PYGIPVHAPDGC--IPCS--CHPEHAEDCEQGSGRCT-CRPNFRGDHCEEC 360
Query: 97 RAGSYG------------NATTQEG------CRKCDCNSHGNSVLG-VCDSITGECICQD 137
AG Y + + E + CDCN G VL +CD+ G C+C+
Sbjct: 361 AAGYYHFPVCSRIPILPISTPSPEDPVAGDIIKGCDCNLEG--VLPEICDA-QGRCLCRP 417
Query: 138 NTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGP 174
G C+ C PG+Y P C QC A G P
Sbjct: 418 GVGGAQCDACRPGFYSFPICQA-C--QCSALGSYQTP 451
Score = 124 (48.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 31/95 (32%), Positives = 38/95 (40%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDE-----CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDC 115
D C CN ICD C G C CR G Y C+ C C
Sbjct: 390 DIIKGCDCNLEGVLPE---ICDAQGRCLCRPGVGGAQCDACRPGFYSFPI----CQACQC 442
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
++ G S C +TG+C CQ G+ C+RCL G
Sbjct: 443 SALG-SYQTPCSPVTGQCECQPGITGQRCDRCLSG 476
Score = 66 (28.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 26/79 (32%), Positives = 32/79 (40%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNH---GT--CDLLLTGVHI 354
P C R C +C+CPP P C ++C E H F H G C+ TG
Sbjct: 1215 PCSCGR-RLCEETTGRCLCPPLTVRPQC--DVC--EVHSFSFHPLAGCEGCNCSRTG--- 1266
Query: 355 THGRTL-HYQVDLIRCTCR 372
T G T D +C CR
Sbjct: 1267 TDGTTTPECDGDHGQCRCR 1285
Score = 52 (23.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 316 CVCPPRRTGPDCQ 328
C CPP TG CQ
Sbjct: 1558 CACPPDYTGDSCQ 1570
Score = 50 (22.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 272 LEAKSGVMTI----HYKQGKPSEGFNATY-QIFSCPDKCPENRT----CI----NNQCVC 318
+E SG MTI H ++ K +N + CP CP + + C+ N +C C
Sbjct: 1608 IECSSG-MTIRGGEHCERCKEGSYWNTIHGSCRVCP--CPHSDSFATGCVVTGENVKCSC 1664
Query: 319 PPRRTGPDCQ 328
P TG C+
Sbjct: 1665 KPGYTGTRCE 1674
Score = 46 (21.3 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 313 NNQCVCPPRRTGPDC 327
+ QC C PR TG C
Sbjct: 1279 HGQCRCRPRITGRQC 1293
Score = 43 (20.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 312 INNQCVCPPRRTGPDCQEEICPNECHEF 339
+ QC C P TG C C + +F
Sbjct: 455 VTGQCECQPGITGQRCDR--CLSGASDF 480
Score = 37 (18.1 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 13/40 (32%), Positives = 15/40 (37%)
Query: 294 ATYQIFSCPDKC-PENRT---CI--NNQCVCPPRRTGPDC 327
A Y + P +C P T C QC C P G C
Sbjct: 1161 ALYHEGALPCECHPAGATGHPCSPEGGQCPCRPHVIGRQC 1200
Score = 37 (18.1 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 296 YQIFSC-PDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECH 337
Y+ C P C + T VC P C+E + EC+
Sbjct: 1301 YRFPECLPCHCSRDGT---EPGVCDPGTGACLCKENVQGTECN 1340
>UNIPROTKB|E2RPP1 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 CTD:3909 KO:K06240 OMA:DSCQGCS EMBL:AAEX03005452
RefSeq:XP_537297.2 Ensembl:ENSCAFT00000028869 GeneID:480173
KEGG:cfa:480173 Uniprot:E2RPP1
Length = 3337
Score = 254 (94.5 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 68/175 (38%), Positives = 82/175 (46%)
Query: 43 CKGPPDY---SCQ-CELGW--------TGVDCSVNCLCNNHST-CVHGIGICDECHDWTT 89
C PPDY SCQ C G+ TG C V C CN HS C G GIC C T
Sbjct: 1657 CACPPDYTGDSCQGCSPGYYRDNRGSYTG-RC-VPCNCNGHSNRCQDGSGICINCQHNTA 1714
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG---ECICQDNTQGKNCER 146
G+HC+ C+ G Y N T C C C H NS C +TG C C+ G CER
Sbjct: 1715 GEHCERCKEGHYRN-TIHGSCSVCPC-PHSNSFATGC-VVTGGNVRCSCKPGYTGTQCER 1771
Query: 147 CLPGYYGDPTD-GGTCY-YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSREC 199
C PGY+G+P GG+C C + G L+ P G + N D+P+ EC
Sbjct: 1772 CAPGYFGNPQKFGGSCQPCNCNSNGHLSSCHPL-TGDCI---NQEPKDDSPAEEC 1822
Score = 160 (61.4 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 40/117 (34%), Positives = 52/117 (44%)
Query: 50 SCQCELGWTGVDCSVNCLCNNH--STCVHGI----GICDECHDWTTGDHCQYCRAG---S 100
+C C G +DC + S +HGI G+C C T G +C+ C G
Sbjct: 355 ACNCH-GHA-IDCYYDPDVERQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYYRP 412
Query: 101 YG-NATTQEGCRKCDCN-SHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
YG GC C CN H + C+ +G C C+ N QG NCE+C GYY P
Sbjct: 413 YGVPVDAPHGCIPCSCNPEHADD----CEPGSGRCTCKPNFQGDNCEKCAVGYYNFP 465
Score = 144 (55.7 bits), Expect = 9.1e-06, Sum P(3) = 9.1e-06
Identities = 38/117 (32%), Positives = 48/117 (41%)
Query: 56 GWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCD 114
G G +CS + C G C C TG C C +G Y C C
Sbjct: 1355 GCEGCNCSRRGTVGAATRECDRDHGQC-RCKPRITGRQCDRCASGFYHFPE----CIPCH 1409
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG-YYGDPTDGGTCYYQCMARGM 170
CN G GVCD TG C+C++N +G C C G +Y DP + C C G+
Sbjct: 1410 CNKDGTES-GVCDPGTGVCLCKENVEGTECNVCREGSFYLDPANPKGCT-SCFCFGI 1464
Score = 142 (55.0 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 42/129 (32%), Positives = 58/129 (44%)
Query: 41 GYCKGPPDY---SCQ-CE-LGWTGVD-----CSVNCLCNNHSTCVHGIGICDE----CH- 85
GYC+ P SC C+ L W CS C C+ T V GIG C + CH
Sbjct: 597 GYCQCKPHAESPSCSICKPLYWNLAKENPNGCS-ECQCHVAGT-VSGIGECGQRDGDCHC 654
Query: 86 -DWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
+GD C C G + + GC+ C C+ G +V +C +G C C+++ GK
Sbjct: 655 KSHVSGDSCDTCEDGYFALKKSNYFGCQGCQCDI-GGAVTPMCSGPSGGCHCREHVVGKA 713
Query: 144 CERCLPGYY 152
C+R YY
Sbjct: 714 CQRPENNYY 722
Score = 140 (54.3 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 32/103 (31%), Positives = 45/103 (43%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRK 112
C+ W GV + +C+ + C+ C G C CR G Y C+
Sbjct: 491 CDCNWEGV---LPEICDAYGRCL--------CRPGVEGPRCDACRVGFYSFPI----CQA 535
Query: 113 CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C C+ G S C+ +TG+C CQ G+ C+RCL G Y P
Sbjct: 536 CQCSVLG-SYQTPCNPVTGQCECQPGITGQRCDRCLSGAYDFP 577
Score = 134 (52.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 42/155 (27%), Positives = 59/155 (38%)
Query: 46 PPDYSCQCELGWTGVDCSVNCL---------------CNNHSTCVHGIGICDECHDWTTG 90
P C+C+ G TG C CL C+ T +G C +C
Sbjct: 550 PVTGQCECQPGITGQRCD-RCLSGAYDFPHCQGSRSVCDPAGTLDSSLGYC-QCKPHAES 607
Query: 91 DHCQYCRAGSYGNATTQE--GCRKCDCNSHGN-SVLGVCDSITGECICQDNTQGKNCERC 147
C C+ Y N + GC +C C+ G S +G C G+C C+ + G +C+ C
Sbjct: 608 PSCSICKP-LYWNLAKENPNGCSECQCHVAGTVSGIGECGQRDGDCHCKSHVSGDSCDTC 666
Query: 148 LPGYYGDPTDG--GTCYYQCMARGMLTG--PGPQG 178
GY+ G QC G +T GP G
Sbjct: 667 EDGYFALKKSNYFGCQGCQCDIGGAVTPMCSGPSG 701
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 23/63 (36%), Positives = 30/63 (47%)
Query: 113 CDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGML 171
CDCN G VL +CD+ G C+C+ +G C+ C G+Y P C QC G
Sbjct: 491 CDCNWEG--VLPEICDAY-GRCLCRPGVEGPRCDACRVGFYSFPICQA-C--QCSVLGSY 544
Query: 172 TGP 174
P
Sbjct: 545 QTP 547
Score = 79 (32.9 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 35/136 (25%), Positives = 54/136 (39%)
Query: 3 IIFRISGLTTAKDDALSRCTVLLLYIFNASLCY--NKCIYGYC--KGPPDYSCQCELGWT 58
++ I+G AK+ S N LC+ + G+ K D + ++
Sbjct: 230 VVSLINGRPGAKNFTFSHTLREFTKATNIRLCFLRTNTLLGHLISKAQRDPTVTRRYYYS 289
Query: 59 GVDCSVN--CLCNNHST-C----VHGIGICDECHDWTTGDHCQYCRAGSYGNA----TTQ 107
D S+ C+CN H+ C + C EC T G C C AG Y T
Sbjct: 290 IKDISIGGRCVCNGHAQECNANNPEKLFQC-ECQHHTCGKTCDRCCAG-YNQRRWRPATW 347
Query: 108 EGCRKCD-CNSHGNSV 122
E +C+ CN HG+++
Sbjct: 348 EQSNECEACNCHGHAI 363
Score = 64 (27.6 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNH 342
P C R C + +C+CPP P C E+C + H F H
Sbjct: 1314 PCNCGP-RLCDEMTGKCLCPPHTVRPQC--EVC--DTHSFSFH 1351
Score = 52 (23.4 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 316 CVCPPRRTGPDCQ 328
C CPP TG CQ
Sbjct: 1657 CACPPDYTGDSCQ 1669
Score = 49 (22.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEF 339
+ QC C PR TG C C + + F
Sbjct: 1378 HGQCRCKPRITGRQCDR--CASGFYHF 1402
Score = 49 (22.3 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 284 KQGKPSEGFNATYQIFSCPDKCPENRTCI----NNQCVCPPRRTGPDCQ 328
K+G + + + CP C+ N +C C P TG C+
Sbjct: 1722 KEGHYRNTIHGSCSVCPCPHSNSFATGCVVTGGNVRCSCKPGYTGTQCE 1770
Score = 46 (21.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 312 INNQCVCPPRRTGPDCQEEICPNECHEF 339
+ QC C P TG C C + ++F
Sbjct: 551 VTGQCECQPGITGQRCDR--CLSGAYDF 576
Score = 43 (20.2 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 214 PADIILLRLQPDINVPCNENAVYIYD 239
P D++LL +PD+ + ++ IY+
Sbjct: 1549 PGDMVLLEKKPDVQLTGQHMSI-IYE 1573
Score = 40 (19.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHIT 355
+C+C P GP C + C + F C + G + T
Sbjct: 508 RCLCRPGVEGPRC--DACRVGFYSFPICQACQCSVLGSYQT 546
Score = 38 (18.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 7/17 (41%), Positives = 7/17 (41%)
Query: 316 CVCPPRRTGPDCQEEIC 332
C C P P C IC
Sbjct: 599 CQCKPHAESPSCS--IC 613
>ZFIN|ZDB-GENE-081028-60 [details] [associations]
symbol:atrnl1a "attractin-like 1a" species:7955
"Danio rerio" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0030246 "carbohydrate
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
InterPro:IPR016201 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 ZFIN:ZDB-GENE-081028-60
GO:GO:0016021 GO:GO:0007275 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 SUPFAM:SSF103575 EMBL:AL954359
EMBL:CABZ01039684 EMBL:CABZ01039685 EMBL:CABZ01039686
EMBL:CABZ01039687 EMBL:CABZ01039688 EMBL:CABZ01039689
EMBL:CABZ01039690 EMBL:CABZ01039691 EMBL:CABZ01039692
EMBL:CABZ01039693 EMBL:CABZ01039694 EMBL:CABZ01039695
EMBL:CABZ01039696 EMBL:CR762487 EMBL:CT573136 IPI:IPI00836296
Ensembl:ENSDART00000089533 ArrayExpress:F1Q4X2 Bgee:F1Q4X2
Uniprot:F1Q4X2
Length = 1400
Score = 248 (92.4 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 49/121 (40%), Positives = 65/121 (53%)
Query: 51 CQCELG--WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
C E G W + C C CN HSTCV+G +C++C + T G HCQ+C G YG+ T
Sbjct: 1020 CSREKGFDWAYITCPA-CQCNGHSTCVNG-SVCEQCKNLTAGLHCQFCLPGYYGDPTNGG 1077
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYYQC 165
C+ C CN+H N VC S +G+C C +G C+ C Y G+P G TCYY
Sbjct: 1078 KCQACRCNNHAN----VCHSSSGKCYCTTKGVKGDQCQLCDSENRYLGNPLRG-TCYYNL 1132
Query: 166 M 166
+
Sbjct: 1133 L 1133
>UNIPROTKB|Q16787 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008544 "epidermis
development" evidence=TAS] [GO:0005198 "structural molecule
activity" evidence=NAS] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0031581 "hemidesmosome assembly" evidence=TAS] [GO:0034329
"cell junction assembly" evidence=TAS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0030155 GO:GO:0005198
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
Reactome:REACT_111155 Pathway_Interaction_DB:syndecan_4_pathway
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0008544 GO:GO:0005604 DrugBank:DB00009 DrugBank:DB00029
DrugBank:DB00031 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0031581 DrugBank:DB00015 GO:GO:0045995 Orphanet:79402
eggNOG:NOG292643 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:L34155 EMBL:AY327115 EMBL:AY327116 EMBL:AB107369 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 EMBL:X85107 EMBL:X85108 EMBL:X84900
IPI:IPI00377045 IPI:IPI00743994 IPI:IPI00790908 PIR:A55347
RefSeq:NP_000218.2 RefSeq:NP_001121189.1 RefSeq:NP_937762.1
UniGene:Hs.436367 ProteinModelPortal:Q16787 SMR:Q16787
IntAct:Q16787 MINT:MINT-1431248 STRING:Q16787 PhosphoSite:Q16787
DMDM:215274012 PaxDb:Q16787 PRIDE:Q16787 DNASU:3909
Ensembl:ENST00000313654 Ensembl:ENST00000399516 GeneID:3909
KEGG:hsa:3909 UCSC:uc002kuq.3 CTD:3909 GeneCards:GC18P021269
HGNC:HGNC:6483 HPA:CAB010757 HPA:HPA009309 MIM:226700 MIM:245660
MIM:600805 neXtProt:NX_Q16787 Orphanet:79404 Orphanet:2407
PharmGKB:PA30272 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
OMA:DSCQGCS OrthoDB:EOG4FBHS0 ChiTaRS:LAMA3 GenomeRNAi:3909
NextBio:15345 PMAP-CutDB:Q6VU68 ArrayExpress:Q16787 Bgee:Q16787
CleanEx:HS_LAMA3 Genevestigator:Q16787 GermOnline:ENSG00000053747
GO:GO:0005610 Uniprot:Q16787
Length = 3333
Score = 251 (93.4 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 69/175 (39%), Positives = 83/175 (47%)
Query: 43 CKGPPDY---SCQ-CELGW--------TGVDCSVNCLCNNHST-CVHGIGICDECHDWTT 89
C PP Y SCQ C G+ TG C V C CN HS C G GIC C T
Sbjct: 1654 CACPPAYAGDSCQGCSPGYYRDHKGLYTG-RC-VPCNCNGHSNQCQDGSGICVNCQHNTA 1711
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERC 147
G+HC+ C+ G YGNA CR C C H NS C G+ C C+ G CERC
Sbjct: 1712 GEHCERCQEGYYGNAV-HGSCRACPC-PHTNSFATGCVVNGGDVRCSCKAGYTGTQCERC 1769
Query: 148 LPGYYGDPTD-GGTCY-YQCMARGMLTGPGPQGLGSGLAERNAWEGKDT-PSREC 199
PGY+G+P GG+C C + G L P G + + E KD+ P+ EC
Sbjct: 1770 APGYFGNPQKFGGSCQPCSCNSNGQLGSCHPL-TGDCINQ----EPKDSSPAEEC 1819
Score = 149 (57.5 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 45/145 (31%), Positives = 59/145 (40%)
Query: 41 GYCKGPP-DYSCQCELGWTG-------VDCSVNCLCNNHSTCVHGIGICDE------CHD 86
G C+ PP QCE+ T C C C+ T + CD C
Sbjct: 1324 GQCRCPPRTVRPQCEVCETHSFSFHPMAGCE-GCNCSRRGTIEAAMPECDRDSGQCRCKP 1382
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
TG C C +G Y E C C+CN G GVCD TG C+C++N +G C
Sbjct: 1383 RITGRQCDRCASGFY---RFPE-CVPCNCNRDGTEP-GVCDPGTGACLCKENVEGTECNV 1437
Query: 147 CLPG-YYGDPTDGGTCYYQCMARGM 170
C G ++ DP + C C G+
Sbjct: 1438 CREGSFHLDPANLKGCT-SCFCFGV 1461
Score = 145 (56.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 30/84 (35%), Positives = 40/84 (47%)
Query: 77 GIGICDECHDWTTGDHCQYCRAG---SYG-NATTQEGCRKCDCN-SHGNSVLGVCDSITG 131
G G+C C T G +C+ C G YG +GC C C+ H + C+ +G
Sbjct: 386 GGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDPEHADG----CEQGSG 441
Query: 132 ECICQDNTQGKNCERCLPGYYGDP 155
C C+ N G NCE+C GYY P
Sbjct: 442 RCHCKPNFHGDNCEKCAIGYYNFP 465
Score = 141 (54.7 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 41/137 (29%), Positives = 65/137 (47%)
Query: 30 NASLCYNKCIYGYCKGPPDYSC-QCELGWTGVD------CSVNCLCNNHSTCVHGIGIC- 81
N++L Y +C + +GP +C +C+L + +D CS C C+ T V G G C
Sbjct: 593 NSNLGYCQCKL-HVEGP---TCSRCKLLYWNLDKENPSGCS-ECKCHKAGT-VSGTGECR 646
Query: 82 ---DECH--DWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECIC 135
+CH GD C C G + + GC+ C C+ G ++ +C +G C C
Sbjct: 647 QGDGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDI-GGALSSMCSGPSGVCQC 705
Query: 136 QDNTQGKNCERCLPGYY 152
+++ GK C+R YY
Sbjct: 706 REHVVGKVCQRPENNYY 722
Score = 139 (54.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 59 GVDCSVNC----LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCD 114
G DC++ +C+ H C+ C G C CR+G Y C+ C
Sbjct: 490 GCDCNLEGVLPEICDAHGRCL--------CRPGVEGPRCDTCRSGFYSFPI----CQACW 537
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C++ G+ + C S+TG+C C+ G+ C+RCL G Y P
Sbjct: 538 CSALGSYQMP-CSSVTGQCECRPGVTGQRCDRCLSGAYDFP 577
Score = 130 (50.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 42/151 (27%), Positives = 61/151 (40%)
Query: 51 CQCELGWTGVDCSVNCL---------------CNNHSTCVHGIGICDECHDWTTGDHCQY 95
C+C G TG C CL C+ T +G C +C G C
Sbjct: 555 CECRPGVTGQRCD-RCLSGAYDFPHCQGSSSACDPAGTINSNLGYC-QCKLHVEGPTCSR 612
Query: 96 CRAGSYGNATTQE--GCRKCDCNSHGN-SVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ Y N + GC +C C+ G S G C G+C C+ + G +C+ C GY+
Sbjct: 613 CKL-LYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCEDGYF 671
Query: 153 G-DPTDGGTCY-YQCMARGMLTG--PGPQGL 179
+ ++ C QC G L+ GP G+
Sbjct: 672 ALEKSNYFGCQGCQCDIGGALSSMCSGPSGV 702
Score = 114 (45.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 37/135 (27%), Positives = 51/135 (37%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
C + L + C G C EC TG C C +G+Y Q CD NS
Sbjct: 536 CWCSALGSYQMPCSSVTGQC-ECRPGVTGQRCDRCLSGAYDFPHCQGSSSACDPAGTINS 594
Query: 122 VLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGTCYY-QCMARGMLTGPGPQGL 179
LG C C+ + +G C RC Y+ D + C +C G ++G G
Sbjct: 595 NLGYCQ-------CKLHVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQ 647
Query: 180 GSGLAERNAWEGKDT 194
G G + G D+
Sbjct: 648 GDGDCHCKSHVGGDS 662
Score = 73 (30.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNH 342
P C R C + QC CPPR P C E+C E H F H
Sbjct: 1311 PCSCGR-RLCEEMTGQCRCPPRTVRPQC--EVC--ETHSFSFH 1348
Score = 50 (22.7 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 21/72 (29%), Positives = 30/72 (41%)
Query: 270 EVLEAKSGVMTIHYKQGKPSEGFNATYQ--IFSCPDKCPENRTCINNQCVCPPRRTGPDC 327
EV E S + H G EG N + + I + +C + + QC C PR TG C
Sbjct: 1338 EVCETHS--FSFHPMAG--CEGCNCSRRGTIEAAMPECDRD----SGQCRCKPRITGRQC 1389
Query: 328 QEEICPNECHEF 339
C + + F
Sbjct: 1390 DR--CASGFYRF 1399
Score = 48 (22.0 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 316 CVCPPRRTGPDCQ 328
C CPP G CQ
Sbjct: 1654 CACPPAYAGDSCQ 1666
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 312 INNQCVCPPRRTGPDCQEEICPNECHEF 339
+ QC C P TG C C + ++F
Sbjct: 551 VTGQCECRPGVTGQRCDR--CLSGAYDF 576
Score = 44 (20.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 14/39 (35%), Positives = 15/39 (38%)
Query: 316 CVCPPR-RTGPDCQEE--ICPNECHEFLNHGTCDLLLTG 351
C C P TGP C E CP C + C TG
Sbjct: 1266 CECHPTGATGPHCSPEGGQCP--CQPNVIGRQCTRCATG 1302
Score = 43 (20.2 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 214 PADIILLRLQPDINVPCNENAVYIYD 239
P D++LL +PD+ + ++ IY+
Sbjct: 1546 PGDMVLLEKKPDVQLTGQHMSI-IYE 1570
Score = 42 (19.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEF 339
+ +C+C P GP C + C + + F
Sbjct: 506 HGRCLCRPGVEGPRC--DTCRSGFYSF 530
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/40 (32%), Positives = 15/40 (37%)
Query: 294 ATYQIFSCPDKC-PENRT---CI--NNQCVCPPRRTGPDC 327
A Y + P +C P T C QC C P G C
Sbjct: 1257 AFYHKGALPCECHPTGATGPHCSPEGGQCPCQPNVIGRQC 1296
>RGD|69063 [details] [associations]
symbol:Atrn "attractin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004872 "receptor
activity" evidence=IEA;ISO] [GO:0005615 "extracellular space"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=ISO] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0040014 "regulation of
multicellular organism growth" evidence=IEA;ISO] [GO:0042552
"myelination" evidence=ISO] [GO:0043473 "pigmentation" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR006652 InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437
PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034 SMART:SM00181
RGD:69063 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0005615
GO:GO:0006979 GO:GO:0030246 GO:GO:0006954 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
PROSITE:PS00615 GO:GO:0040014 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225 HOVERGEN:HBG004312
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 CTD:8455 OrthoDB:EOG4R23SZ EMBL:AB038387
EMBL:AB038388 EMBL:AB049248 IPI:IPI00194733 IPI:IPI00553894
RefSeq:NP_112641.1 UniGene:Rn.53846 ProteinModelPortal:Q99J86
STRING:Q99J86 PhosphoSite:Q99J86 PRIDE:Q99J86
Ensembl:ENSRNOT00000028847 GeneID:83526 KEGG:rno:83526
UCSC:RGD:69063 InParanoid:Q99J86 NextBio:616013
Genevestigator:Q99J86 Uniprot:Q99J86
Length = 1432
Score = 234 (87.4 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 43/110 (39%), Positives = 62/110 (56%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HS C++ IC++C D TTG HC+ C +G YG+ T C+ C CN
Sbjct: 1058 WSFIHCPA-CQCNGHSKCINQ-SICEKCEDLTTGKHCETCISGFYGDPTNGGKCQPCKCN 1115
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYY 163
H + +C++ TG+C C +G+ C+ C Y G+P G TCYY
Sbjct: 1116 GHAS----LCNTNTGKCFCTTKGVKGEECQLCEVENRYQGNPLKG-TCYY 1160
Score = 59 (25.8 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
A C C+ G P C C GW G C +C
Sbjct: 101 AKECDRPCVNGGRCNPGTGQCVCPTGWVGEQCQ-HC 135
Score = 51 (23.0 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 10/34 (29%), Positives = 13/34 (38%)
Query: 34 CYNKCIY---GYCKGPPDYSCQCELGWTGVDCSV 64
C + C + G C C C W G CS+
Sbjct: 290 CTDNCGFPHRGICNASDTRGCSCFPHWQGPGCSI 323
>UNIPROTKB|E1BYK5 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR013111 InterPro:IPR003659
Pfam:PF07974 SMART:SM00423 GeneTree:ENSGT00390000001118
EMBL:AADN02030934 IPI:IPI00585255 ProteinModelPortal:E1BYK5
Ensembl:ENSGALT00000014903 Uniprot:E1BYK5
Length = 1242
Score = 226 (84.6 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 42/113 (37%), Positives = 58/113 (51%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HSTC++ +CD+C + TTG C+ C G YG+ T C C C+
Sbjct: 1009 WSFIQCPA-CQCNGHSTCINS-NVCDQCKNLTTGKQCETCMPGYYGDPTNGGQCTACTCS 1066
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYYQCM 166
H N +C TG+C C +G C+ C Y G+P G TCYY +
Sbjct: 1067 GHAN----ICHMQTGKCFCTTKGIKGDQCQLCDSENRYLGNPLRG-TCYYSLL 1114
Score = 149 (57.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/61 (45%), Positives = 33/61 (54%)
Query: 110 CRKCDCNSHGNSV-LGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMAR 168
C C CN H + VCD C++ T GK CE C+PGYYGDPT+GG C C
Sbjct: 1014 CPACQCNGHSTCINSNVCDQ------CKNLTTGKQCETCMPGYYGDPTNGGQCT-ACTCS 1066
Query: 169 G 169
G
Sbjct: 1067 G 1067
Score = 73 (30.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 23/80 (28%), Positives = 33/80 (41%)
Query: 25 LLYIFNASLCYNKCI-YGYCKG----PPDYSCQCELGWTGVDCSV-----NCLCNNHSTC 74
+ Y N+ C N C +G C P C+C+ W G C + NC +H C
Sbjct: 207 IFYSINS--CPNNCSEHGKCTTSLSIPSRVYCECDKYWKGEACDIPYCKANCGSPDHGYC 264
Query: 75 -VHGIGICDECHDWTTGDHC 93
+ G +C C+D G C
Sbjct: 265 DLTGEKLC-VCNDSWQGPDC 283
Score = 66 (28.3 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCSVN 65
+GYC + C C W G DCS+N
Sbjct: 261 HGYCDLTGEKLCVCNDSWQGPDCSLN 286
Score = 60 (26.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 64 VNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
++C + H CV+ +CD+ W GD CQ+C+
Sbjct: 70 ISCF-SGH--CVNSTCVCDQ--GWV-GDQCQHCQ 97
Score = 55 (24.4 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
C G+C +C C+ GW G C +C
Sbjct: 72 CFSGHCVNS---TCVCDQGWVGDQCQ-HC 96
>MGI|MGI:1341628 [details] [associations]
symbol:Atrn "attractin" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IMP] [GO:0030246 "carbohydrate binding"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IMP] [GO:0042552 "myelination" evidence=IMP]
[GO:0043473 "pigmentation" evidence=IMP] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 MGI:MGI:1341628
GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0005615
GO:GO:0006979 GO:GO:0030246 GO:GO:0006954 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014
GO:GO:0004872 EMBL:CH466519 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042552 Gene3D:2.120.10.80 GO:GO:0021549 PROSITE:PS01186
EMBL:AL833771 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 GO:GO:0043473
eggNOG:NOG242225 HOVERGEN:HBG004312 InterPro:IPR003659
SMART:SM00423 GeneTree:ENSGT00390000001118 HOGENOM:HOG000231727
CTD:8455 OMA:NPLKGTC OrthoDB:EOG4R23SZ EMBL:AF116897 EMBL:AF119821
EMBL:AH007542 IPI:IPI00224752 RefSeq:NP_033860.2 UniGene:Mm.119936
ProteinModelPortal:Q9WU60 SMR:Q9WU60 STRING:Q9WU60
PhosphoSite:Q9WU60 PaxDb:Q9WU60 PRIDE:Q9WU60
Ensembl:ENSMUST00000028781 GeneID:11990 KEGG:mmu:11990
InParanoid:A2AP43 NextBio:280155 Bgee:Q9WU60 CleanEx:MM_ATRN
Genevestigator:Q9WU60 GermOnline:ENSMUSG00000027312 Uniprot:Q9WU60
Length = 1428
Score = 232 (86.7 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 43/110 (39%), Positives = 61/110 (55%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HS C++ IC++C D TTG HC+ C +G YG+ T C+ C CN
Sbjct: 1054 WSFIHCPA-CQCNGHSKCINQ-SICEKCEDLTTGKHCETCISGFYGDPTNGGKCQPCKCN 1111
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYY 163
H + +C++ TG+C C +G C+ C Y G+P G TCYY
Sbjct: 1112 GHAS----LCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLKG-TCYY 1156
Score = 59 (25.8 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
A C C+ G P C C GW G C +C
Sbjct: 97 AKECDRPCVNGGRCNPGTGQCVCPTGWVGEQCQ-HC 131
Score = 51 (23.0 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 10/34 (29%), Positives = 13/34 (38%)
Query: 34 CYNKCIY---GYCKGPPDYSCQCELGWTGVDCSV 64
C + C + G C C C W G CS+
Sbjct: 286 CTDNCGFPHRGICNASDTRGCSCFPHWQGPGCSI 319
>UNIPROTKB|F1P2W2 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:NPLKGTC EMBL:AADN02048964
EMBL:AADN02048965 EMBL:AADN02048966 EMBL:AADN02048967
EMBL:AADN02048968 EMBL:AADN02048969 EMBL:AADN02048970
EMBL:AADN02048971 EMBL:AADN02048972 EMBL:AADN02048973
EMBL:AADN02048974 EMBL:AADN02048975 EMBL:AADN02048976
EMBL:AADN02048977 EMBL:AADN02048978 EMBL:AADN02048979
EMBL:AADN02048980 EMBL:AADN02048981 IPI:IPI00572900
ProteinModelPortal:F1P2W2 Ensembl:ENSGALT00000025829 Uniprot:F1P2W2
Length = 1296
Score = 230 (86.0 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 43/110 (39%), Positives = 61/110 (55%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HS C++ IC++C + TTG HC+ C +G YG+ T C+ C CN
Sbjct: 920 WSFIQCPA-CQCNGHSKCINE-SICEKCENLTTGKHCETCISGYYGDPTNGGTCQPCKCN 977
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYY 163
H + VC++ TG+C C +G C+ C Y G+P G TCYY
Sbjct: 978 GHAS----VCNTNTGKCFCTTKGIKGDECQLCEVENRYQGNPLKG-TCYY 1022
Score = 60 (26.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSV 64
G+C +C C GW G CS+
Sbjct: 162 GFCNFNDTKACVCSAGWQGPGCSI 185
Score = 54 (24.1 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 29 FNASLCYNKCI-YGYCK---GPPDYSCQCELGWTGVDCSV 64
+N ++C N C G C+ C+C W G C +
Sbjct: 110 YNFNMCPNNCSGRGECRLNNSSNSLECECAKYWKGEACDI 149
>ZFIN|ZDB-GENE-090312-21 [details] [associations]
symbol:atrn "attractin" species:7955 "Danio rerio"
[GO:0016020 "membrane" evidence=IEA] [GO:0030246 "carbohydrate
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 ZFIN:ZDB-GENE-090312-21
GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CR388098 EMBL:CR589874
EMBL:CT583702 IPI:IPI00806015 ProteinModelPortal:F1Q5V0
Ensembl:ENSDART00000089528 ArrayExpress:F1Q5V0 Bgee:F1Q5V0
Uniprot:F1Q5V0
Length = 1383
Score = 222 (83.2 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 42/110 (38%), Positives = 58/110 (52%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HS+CV+ +C+ C D TTG C+ C +G YG+ T C+ C CN
Sbjct: 1009 WSFIQCPA-CQCNGHSSCVNE-SVCERCEDLTTGKQCESCISGYYGDPTNGGSCQPCKCN 1066
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYY 163
H + +C+S G+C C +G C C Y G+P G TCYY
Sbjct: 1067 GHAS----MCNSNNGKCFCTTKGIKGDRCHVCEVENRYQGNPLKG-TCYY 1111
Score = 149 (57.5 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 31/72 (43%), Positives = 39/72 (54%)
Query: 99 GSYGNATTQEGCRKCDCNSHGNSVL-GVCDSITGECICQDNTQGKNCERCLPGYYGDPTD 157
G+Y + Q C C CN H + V VC+ C+D T GK CE C+ GYYGDPT+
Sbjct: 1005 GNYNWSFIQ--CPACQCNGHSSCVNESVCER------CEDLTTGKQCESCISGYYGDPTN 1056
Query: 158 GGTCYYQCMARG 169
GG+C C G
Sbjct: 1057 GGSCQ-PCKCNG 1067
Score = 123 (48.4 bits), Expect = 0.00052, P = 0.00052
Identities = 58/225 (25%), Positives = 87/225 (38%)
Query: 139 TQGKNCER-CLPGYYGDPTDGGTCYY-----QCM-ARGMLTGPGPQGLGSGLAERNAWEG 191
T+ K C++ CL G + C QC G GP G L++ G
Sbjct: 48 TEAKECDKPCLNGQCSAASGACVCETGWVGEQCQHCGGRFRLTGPSGY---LSDG---PG 101
Query: 192 KDTPSRECLWII-GQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGG 250
+C W+I GQ P I+ LR + C+ + +Y+YDG S+
Sbjct: 102 NYKYKTKCTWLIEGQ--------PNSILRLRFE-HFATECSWDHLYVYDG-----DSIYS 147
Query: 251 THQSTTLGVFCTEDMHRGY--EVLEAKSGVMTIHYKQGKPSE--GFNATYQIFSCPDKCP 306
+ G+ E EV+ A SG +H+ GFN +Y++ +CP+ C
Sbjct: 148 PLLAAFSGLIVPESYSNETVPEVV-AHSGFTLLHFFSDAAYNLTGFNISYRLNTCPNNCS 206
Query: 307 ENRTC-INN-----QCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+ C + N QCVC G C C ++C F G C
Sbjct: 207 DRGECRVGNSSESVQCVCEDGWKGEACDVPYCSSDCG-FPLRGQC 250
Score = 75 (31.5 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 26/78 (33%), Positives = 34/78 (43%)
Query: 29 FNASLCYNKCI-YGYCK-GPPDYS--CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
+ + C N C G C+ G S C CE GW G C V C+ S C G + +C
Sbjct: 196 YRLNTCPNNCSDRGECRVGNSSESVQCVCEDGWKGEACDVP-YCS--SDC--GFPLRGQC 250
Query: 85 HDWTTGDHCQYCRAGSYG 102
H+ T C C+ G G
Sbjct: 251 HNSTK--RC-LCKPGWQG 265
Score = 69 (29.3 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
A C C+ G C +C CE GW G C +C
Sbjct: 50 AKECDKPCLNGQCSAASG-ACVCETGWVGEQCQ-HC 83
Score = 64 (27.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 34 CYNKC---IYGYCKGPPDYSCQCELGWTGVDCSVNCLCN 69
C + C + G C C C+ GW G+DCS+ N
Sbjct: 238 CSSDCGFPLRGQCHNSTK-RCLCKPGWQGLDCSITVPAN 275
Score = 54 (24.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
+C CL N + G +C+ W G+ CQ+C
Sbjct: 52 ECDKPCL-NGQCSAASGACVCET--GWV-GEQCQHC 83
>UNIPROTKB|E2R6C0 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030246 "carbohydrate binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 CTD:26033 OMA:YTQQKVS
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:AAEX03015548 EMBL:AAEX03015549
EMBL:AAEX03015550 EMBL:AAEX03015551 EMBL:AAEX03015552
RefSeq:XP_544031.3 Ensembl:ENSCAFT00000018678 GeneID:486901
KEGG:cfa:486901 NextBio:20860606 Uniprot:E2R6C0
Length = 1381
Score = 224 (83.9 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 42/113 (37%), Positives = 58/113 (51%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HSTC++ +C++C + TTG CQ C G YG+ T C C C+
Sbjct: 1007 WSFIQCPA-CQCNGHSTCINN-NVCEQCKNLTTGKQCQDCMPGYYGDPTNGGQCTACTCS 1064
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYYQCM 166
H N +C TG+C C +G C+ C Y G+P G TCYY +
Sbjct: 1065 GHAN----ICHMHTGKCFCTTKGIKGDQCQLCDSENRYVGNPLRG-TCYYSLL 1112
Score = 140 (54.3 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 110 CRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMAR 168
C C CN H + VC+ C++ T GK C+ C+PGYYGDPT+GG C C
Sbjct: 1012 CPACQCNGHSTCINNNVCEQ------CKNLTTGKQCQDCMPGYYGDPTNGGQCT-ACTCS 1064
Query: 169 G 169
G
Sbjct: 1065 G 1065
Score = 75 (31.5 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 23/80 (28%), Positives = 33/80 (41%)
Query: 25 LLYIFNASLCYNKCI-YGYCKG----PPDYSCQCELGWTGVDCSV-----NCLCNNHSTC 74
+ Y N+ C N C +G C P C+C+ W G C + NC +H C
Sbjct: 205 IFYSINS--CPNNCSGHGKCTTSISVPSQVYCECDKYWKGEACDIPYCKANCGSPDHGYC 262
Query: 75 -VHGIGICDECHDWTTGDHC 93
+ G +C C+D G C
Sbjct: 263 DLTGEKLC-VCNDSWQGPDC 281
Score = 66 (28.3 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCSVN 65
+GYC + C C W G DCS+N
Sbjct: 259 HGYCDLTGEKLCVCNDSWQGPDCSLN 284
Score = 54 (24.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 74 CVHGIGICDECHDWTTGDHCQYCR 97
CV+ +CD W GD CQ+C+
Sbjct: 75 CVNSTCLCDP--GWV-GDQCQHCQ 95
Score = 50 (22.7 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
C G C +C C+ GW G C +C
Sbjct: 70 CFSGRCVNS---TCLCDPGWVGDQCQ-HC 94
>ZFIN|ZDB-GENE-030131-8092 [details] [associations]
symbol:atrnl1b "attractin-like 1b" species:7955
"Danio rerio" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181
ZFIN:ZDB-GENE-030131-8092 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CU464184 EMBL:BX004794
IPI:IPI00834013 RefSeq:XP_697655.4 UniGene:Dr.81107
ProteinModelPortal:E7F6C7 Ensembl:ENSDART00000042514 GeneID:569196
KEGG:dre:569196 CTD:569196 NextBio:20889561 Bgee:E7F6C7
Uniprot:E7F6C7
Length = 1364
Score = 242 (90.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 47/121 (38%), Positives = 64/121 (52%)
Query: 51 CQCELG--WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
C E G W + C C CN HSTCV+ + +C++C + TTG HC+ C G YG+ T
Sbjct: 982 CPKERGFEWAFIQCPA-CQCNGHSTCVN-VSMCEQCRNLTTGLHCETCLPGYYGDPTNGG 1039
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYYQC 165
C+ C CN H N +C +TG+C C +G C+ C Y G+P G TCYY
Sbjct: 1040 KCQACKCNGHAN----MCHELTGKCFCTTKGIKGDQCQLCDSENRYLGNPLRG-TCYYNL 1094
Query: 166 M 166
+
Sbjct: 1095 L 1095
>UNIPROTKB|F1M3T8 [details] [associations]
symbol:Atrnl1 "Protein Atrnl1" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 RGD:1563485 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 IPI:IPI00358542
Ensembl:ENSRNOT00000023414 ArrayExpress:F1M3T8 Uniprot:F1M3T8
Length = 1199
Score = 222 (83.2 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 43/113 (38%), Positives = 57/113 (50%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HSTC++ +C++C + TTG CQ C G YG+ T C C C
Sbjct: 987 WSFIQCPA-CQCNGHSTCINN-NVCEQCKNLTTGRQCQDCMPGYYGDPTNGGQCTACTCG 1044
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYYQCM 166
H N VC TG+C C +G C+ C Y G+P G TCYY +
Sbjct: 1045 GHAN----VCHLHTGKCFCTTKGIKGDQCQLCDSENRYVGNPLRG-TCYYSLL 1092
Score = 87 (35.7 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 25/86 (29%), Positives = 36/86 (41%)
Query: 68 CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSY--GNATTQEGCRKCDCNSHGNSVLGV 125
C+ H C + + + YC Y G A C K +C S + G
Sbjct: 197 CSGHGKCTTSVSVASQV----------YCECDKYWKGEACDIPYC-KANCGSPDH---GY 242
Query: 126 CDSITGE--CICQDNTQGKNCERCLP 149
CD +TGE C+C D+ QG +C +P
Sbjct: 243 CD-LTGEKLCVCNDSWQGPDCSLNVP 267
Score = 78 (32.5 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 27/91 (29%), Positives = 34/91 (37%)
Query: 288 PSEGFNATYQIFSCPD-KCPENRTCINNQ-CV-CPPRRTGPDCQEEIC-PNECHEFLNHG 343
P E N + CP +C + TCINN C C TG CQ+ C P + N G
Sbjct: 980 PKEK-NYEWSFIQCPACQCNGHSTCINNNVCEQCKNLTTGRQCQD--CMPGYYGDPTNGG 1036
Query: 344 TCDLLLTGVHITHGRTLHYQVDLIRCTCRQV 374
C G H H CT + +
Sbjct: 1037 QCTACTCG---GHANVCHLHTGKCFCTTKGI 1064
Score = 66 (28.3 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCSVN 65
+GYC + C C W G DCS+N
Sbjct: 240 HGYCDLTGEKLCVCNDSWQGPDCSLN 265
Score = 50 (22.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
C G C +C C+ GW G C +C
Sbjct: 51 CFSGRCVNS---TCLCDPGWVGDQCQ-HC 75
Score = 40 (19.1 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 153 GDPTDGGTCYYQCMARGMLTG 173
G+P D G C Y + R + G
Sbjct: 820 GEPNDSGFCAY--LERAAVAG 838
>MGI|MGI:2147749 [details] [associations]
symbol:Atrnl1 "attractin like 1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IPI] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 MGI:MGI:2147749 GO:GO:0016021 GO:GO:0005886
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 HSSP:P02468 CTD:26033 eggNOG:NOG242225
HOVERGEN:HBG004312 OMA:YTQQKVS OrthoDB:EOG4QC14F ChiTaRS:ATRNL1
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
EMBL:AY688677 EMBL:AK172967 EMBL:AK050882 EMBL:AK147492
EMBL:BC030872 EMBL:BC050020 IPI:IPI00462742 IPI:IPI00874371
IPI:IPI00895221 RefSeq:NP_852080.3 UniGene:Mm.245340
ProteinModelPortal:Q6A051 SMR:Q6A051 STRING:Q6A051
PhosphoSite:Q6A051 PaxDb:Q6A051 PRIDE:Q6A051
Ensembl:ENSMUST00000077282 GeneID:226255 KEGG:mmu:226255
UCSC:uc008iai.2 UCSC:uc008iaj.1 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 InParanoid:Q6A051 NextBio:378084 Bgee:Q6A051
Genevestigator:Q6A051 Uniprot:Q6A051
Length = 1378
Score = 223 (83.6 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 43/113 (38%), Positives = 57/113 (50%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HSTC++ +C++C + TTG CQ C G YG+ T C C C
Sbjct: 1005 WSFIQCPA-CQCNGHSTCINN-NVCEQCKNLTTGRQCQECMPGYYGDPTNGGQCTACTCG 1062
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYYQCM 166
H N VC TG+C C +G C+ C Y G+P G TCYY +
Sbjct: 1063 GHAN----VCHLHTGKCFCTTKGIKGDQCQLCDSENRYVGNPLRG-TCYYSLL 1110
Score = 87 (35.7 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 25/86 (29%), Positives = 36/86 (41%)
Query: 68 CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSY--GNATTQEGCRKCDCNSHGNSVLGV 125
C+ H C + + + YC Y G A C K +C S + G
Sbjct: 214 CSGHGKCTTSVSVASQV----------YCECDKYWKGEACDIPYC-KANCGSPDH---GY 259
Query: 126 CDSITGE--CICQDNTQGKNCERCLP 149
CD +TGE C+C D+ QG +C +P
Sbjct: 260 CD-LTGEKLCVCNDSWQGPDCSLNVP 284
Score = 82 (33.9 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 33/119 (27%), Positives = 41/119 (34%)
Query: 260 FCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPD-KCPENRTCINNQ-CV 317
+C E RG L + P E N + CP +C + TCINN C
Sbjct: 970 YCIEGSSRGPMKLAGVHNSDVVLDTSLCPKEK-NYEWSFIQCPACQCNGHSTCINNNVCE 1028
Query: 318 -CPPRRTGPDCQEEIC-PNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQV 374
C TG CQE C P + N G C G H H CT + +
Sbjct: 1029 QCKNLTTGRQCQE--CMPGYYGDPTNGGQCTACTCG---GHANVCHLHTGKCFCTTKGI 1082
Score = 66 (28.3 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCSVN 65
+GYC + C C W G DCS+N
Sbjct: 257 HGYCDLTGEKLCVCNDSWQGPDCSLN 282
Score = 50 (22.7 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
C G C +C C+ GW G C +C
Sbjct: 68 CFSGRCVNS---TCLCDPGWVGDQCQ-HC 92
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 153 GDPTDGGTCYYQCMARGMLTG 173
G+P D G C Y + R + G
Sbjct: 838 GEPNDSGFCAY--LERAAVAG 856
>UNIPROTKB|Q5VV63 [details] [associations]
symbol:ATRNL1 "Attractin-like protein 1" species:9606 "Homo
sapiens" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0007186 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 EMBL:AY442317 EMBL:AL357059
EMBL:AC022542 EMBL:AC091667 EMBL:AL355530 EMBL:AL356100
EMBL:AL392087 EMBL:AL512304 EMBL:BC047716 EMBL:BC139916
EMBL:BC139923 EMBL:AK127277 EMBL:AB011106 IPI:IPI00297233
IPI:IPI00749514 PIR:T00266 RefSeq:NP_997186.1 UniGene:Hs.501127
HSSP:P02468 ProteinModelPortal:Q5VV63 SMR:Q5VV63 IntAct:Q5VV63
PhosphoSite:Q5VV63 DMDM:189081675 PRIDE:Q5VV63 DNASU:26033
Ensembl:ENST00000355044 GeneID:26033 KEGG:hsa:26033 UCSC:uc001lcf.3
UCSC:uc001lcg.3 CTD:26033 GeneCards:GC10P116843 H-InvDB:HIX0021959
HGNC:HGNC:29063 HPA:HPA038070 MIM:612869 neXtProt:NX_Q5VV63
PharmGKB:PA134961599 eggNOG:NOG242225 HOVERGEN:HBG004312
InParanoid:Q5VV63 OMA:YTQQKVS OrthoDB:EOG4QC14F PhylomeDB:Q5VV63
ChiTaRS:ATRNL1 GenomeRNAi:26033 NextBio:47842 ArrayExpress:Q5VV63
Bgee:Q5VV63 CleanEx:HS_ATRNL1 Genevestigator:Q5VV63
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
Uniprot:Q5VV63
Length = 1379
Score = 223 (83.6 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 42/113 (37%), Positives = 58/113 (51%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HSTC++ +C++C + TTG CQ C G YG+ T C C C+
Sbjct: 1006 WSFIQCPA-CQCNGHSTCINN-NVCEQCKNLTTGKQCQDCMPGYYGDPTNGGQCTACTCS 1063
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYYQCM 166
H N +C TG+C C +G C+ C Y G+P G TCYY +
Sbjct: 1064 GHAN----ICHLHTGKCFCTTKGIKGDQCQLCDSENRYVGNPLRG-TCYYSLL 1111
Score = 140 (54.3 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 110 CRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMAR 168
C C CN H + VC+ C++ T GK C+ C+PGYYGDPT+GG C C
Sbjct: 1011 CPACQCNGHSTCINNNVCEQ------CKNLTTGKQCQDCMPGYYGDPTNGGQCT-ACTCS 1063
Query: 169 G 169
G
Sbjct: 1064 G 1064
Score = 75 (31.5 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 23/80 (28%), Positives = 33/80 (41%)
Query: 25 LLYIFNASLCYNKCI-YGYCKG----PPDYSCQCELGWTGVDCSV-----NCLCNNHSTC 74
+ Y N+ C N C +G C P C+C+ W G C + NC +H C
Sbjct: 204 IFYSINS--CPNNCSGHGKCTTSVSVPSQVYCECDKYWKGEACDIPYCKANCGSPDHGYC 261
Query: 75 -VHGIGICDECHDWTTGDHC 93
+ G +C C+D G C
Sbjct: 262 DLTGEKLC-VCNDSWQGPDC 280
Score = 66 (28.3 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCSVN 65
+GYC + C C W G DCS+N
Sbjct: 258 HGYCDLTGEKLCVCNDSWQGPDCSLN 283
Score = 54 (24.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 74 CVHGIGICDECHDWTTGDHCQYCR 97
CV+ +CD W GD CQ+C+
Sbjct: 74 CVNSTCLCDP--GWV-GDQCQHCQ 94
Score = 50 (22.7 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
C G C +C C+ GW G C +C
Sbjct: 69 CFSGRCVNS---TCLCDPGWVGDQCQ-HC 93
>UNIPROTKB|Q6VU69 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 UniGene:Hs.436367 DNASU:3909
GeneID:3909 KEGG:hsa:3909 CTD:3909 HGNC:HGNC:6483 PharmGKB:PA30272
KO:K06240 ChiTaRS:LAMA3 GenomeRNAi:3909 NextBio:15345
HOVERGEN:HBG100777 EMBL:AY327114 IPI:IPI00895830
RefSeq:NP_001121190.1 ProteinModelPortal:Q6VU69 STRING:Q6VU69
PRIDE:Q6VU69 Ensembl:ENST00000587184 UCSC:uc002kut.4
ArrayExpress:Q6VU69 Bgee:Q6VU69 Uniprot:Q6VU69
Length = 1668
Score = 242 (90.2 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 60/149 (40%), Positives = 74/149 (49%)
Query: 57 WTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDC 115
+TG C V C CN HS C G GIC C T G+HC+ C+ G YGNA CR C C
Sbjct: 71 YTG-RC-VPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNAV-HGSCRACPC 127
Query: 116 NSHGNSVLGVCDSITGE--CICQDNTQGKNCERCLPGYYGDPTD-GGTCY-YQCMARGML 171
H NS C G+ C C+ G CERC PGY+G+P GG+C C + G L
Sbjct: 128 -PHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFGGSCQPCSCNSNGQL 186
Query: 172 TGPGPQGLGSGLAERNAWEGKDT-PSREC 199
P G + + E KD+ P+ EC
Sbjct: 187 GSCHPL-TGDCINQ----EPKDSSPAEEC 210
>UNIPROTKB|B0YJ33 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 IPI:IPI00790908 RefSeq:NP_000218.2
UniGene:Hs.436367 DNASU:3909 GeneID:3909 KEGG:hsa:3909 CTD:3909
HGNC:HGNC:6483 PharmGKB:PA30272 KO:K06240 ChiTaRS:LAMA3
GenomeRNAi:3909 NextBio:15345 HOGENOM:HOG000048708 EMBL:EF444992
STRING:B0YJ33 Ensembl:ENST00000269217 UCSC:uc002kus.4
HOVERGEN:HBG100777 Uniprot:B0YJ33
Length = 1724
Score = 242 (90.2 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 60/149 (40%), Positives = 74/149 (49%)
Query: 57 WTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDC 115
+TG C V C CN HS C G GIC C T G+HC+ C+ G YGNA CR C C
Sbjct: 71 YTG-RC-VPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNAV-HGSCRACPC 127
Query: 116 NSHGNSVLGVCDSITGE--CICQDNTQGKNCERCLPGYYGDPTD-GGTCY-YQCMARGML 171
H NS C G+ C C+ G CERC PGY+G+P GG+C C + G L
Sbjct: 128 -PHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFGGSCQPCSCNSNGQL 186
Query: 172 TGPGPQGLGSGLAERNAWEGKDT-PSREC 199
P G + + E KD+ P+ EC
Sbjct: 187 GSCHPL-TGDCINQ----EPKDSSPAEEC 210
>UNIPROTKB|F1Q117 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 GO:GO:0016021
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 CTD:8455 OMA:NPLKGTC EMBL:AAEX03013830
EMBL:AAEX03013831 RefSeq:XP_534360.2 Ensembl:ENSCAFT00000010258
GeneID:477170 KEGG:cfa:477170 Uniprot:F1Q117
Length = 1417
Score = 227 (85.0 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 42/110 (38%), Positives = 61/110 (55%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HS C++ IC++C + TTG HC+ C +G YG+ T C+ C CN
Sbjct: 1043 WSFIHCPA-CQCNGHSKCINQ-SICEKCENLTTGKHCETCISGFYGDPTNGGRCQPCKCN 1100
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYY 163
H + +C++ TG+C C +G C+ C Y G+P G TCYY
Sbjct: 1101 GHAS----LCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLKG-TCYY 1145
Score = 59 (25.8 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
A C C+ G P C C GW G C +C
Sbjct: 86 AKECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQ-HC 120
Score = 58 (25.5 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 34 CYNKCIY---GYCKGPPDYSCQCELGWTGVDCSV 64
C + C + G C D C C W G CS+
Sbjct: 275 CVHDCGFPDRGVCNSSDDRGCSCFPEWQGPGCSI 308
>UNIPROTKB|Q8MJ16 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 HSSP:P02468 HOVERGEN:HBG004312
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 CTD:8455 OMA:NPLKGTC EMBL:DAAA02036180
EMBL:DAAA02036185 EMBL:DAAA02036181 EMBL:DAAA02036182
EMBL:DAAA02036183 EMBL:DAAA02036184 EMBL:AF531101 IPI:IPI00697240
IPI:IPI01002340 RefSeq:NP_776420.1 UniGene:Bt.12296 STRING:Q8MJ16
Ensembl:ENSBTAT00000039853 GeneID:281017 KEGG:bta:281017
InParanoid:Q8MJ16 NextBio:20805109 Uniprot:Q8MJ16
Length = 1415
Score = 226 (84.6 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 42/110 (38%), Positives = 61/110 (55%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HS C++ IC++C + TTG HC+ C +G YG+ T C+ C CN
Sbjct: 1041 WSFIHCPA-CQCNGHSKCINQ-SICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCRCN 1098
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYY 163
H + +C++ TG+C C +G C+ C Y G+P G TCYY
Sbjct: 1099 GHAS----LCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLKG-TCYY 1143
Score = 59 (25.8 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
A C C+ G P C C GW G C +C
Sbjct: 85 AKECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQ-HC 119
Score = 57 (25.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 12/34 (35%), Positives = 13/34 (38%)
Query: 34 CYNKCIY---GYCKGPPDYSCQCELGWTGVDCSV 64
C N C + G C C C W G CSV
Sbjct: 274 CVNNCGFPHRGICNSSDVRGCSCFSEWQGPGCSV 307
>UNIPROTKB|F1S8B6 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:NPLKGTC EMBL:CU302393
EMBL:CU468397 Ensembl:ENSSSCT00000007826 Uniprot:F1S8B6
Length = 1416
Score = 226 (84.6 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 42/110 (38%), Positives = 61/110 (55%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HS CV+ +C++C + TTG HC+ C +G YG+ T C+ C CN
Sbjct: 1042 WSFIHCPA-CQCNGHSKCVNQ-SVCEKCENLTTGRHCETCISGFYGDPTNGGKCQPCKCN 1099
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYY 163
H + +C++ TG+C C +G C+ C Y G+P G TCYY
Sbjct: 1100 GHAS----LCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLKG-TCYY 1144
Score = 59 (25.8 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
A C C+ G P C C GW G C +C
Sbjct: 85 AKECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQ-HC 119
Score = 57 (25.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 12/34 (35%), Positives = 13/34 (38%)
Query: 34 CYNKCIY---GYCKGPPDYSCQCELGWTGVDCSV 64
C N C + G C C C W G CSV
Sbjct: 274 CVNNCGFPHRGICNSSDVRGCSCFSEWQGPGCSV 307
>UNIPROTKB|O75882 [details] [associations]
symbol:ATRN "Attractin" species:9606 "Homo sapiens"
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0005887 "integral
to plasma membrane" evidence=TAS] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 GO:GO:0005737
GO:GO:0005615 GO:GO:0005887 GO:GO:0006979 GO:GO:0030246
GO:GO:0006954 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0040014
GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225
HOVERGEN:HBG004312 InterPro:IPR003659 SMART:SM00423 EMBL:AF218915
EMBL:AF218889 EMBL:AF218890 EMBL:AF218891 EMBL:AF218892
EMBL:AF218893 EMBL:AF218894 EMBL:AF218895 EMBL:AF218896
EMBL:AF218897 EMBL:AF218898 EMBL:AF218899 EMBL:AF218900
EMBL:AF218901 EMBL:AF218902 EMBL:AF218903 EMBL:AF218904
EMBL:AF218905 EMBL:AF218906 EMBL:AF218907 EMBL:AF218908
EMBL:AF218909 EMBL:AF218911 EMBL:AF218912 EMBL:AF218913
EMBL:AF218914 EMBL:AF218910 EMBL:AF106861 EMBL:AK293010
EMBL:AL109805 EMBL:AL132773 EMBL:AL353193 EMBL:BC101705
EMBL:AB011120 IPI:IPI00027235 IPI:IPI00162735 IPI:IPI00939169
RefSeq:NP_001193976.1 RefSeq:NP_647537.1 RefSeq:NP_647538.1
UniGene:Hs.276252 ProteinModelPortal:O75882 SMR:O75882
IntAct:O75882 STRING:O75882 PhosphoSite:O75882 PaxDb:O75882
PRIDE:O75882 Ensembl:ENST00000262919 Ensembl:ENST00000446916
GeneID:8455 KEGG:hsa:8455 UCSC:uc002wil.2 UCSC:uc002wim.2
UCSC:uc021vzz.1 CTD:8455 GeneCards:GC20P003451 HGNC:HGNC:885
HPA:HPA008853 MIM:603130 neXtProt:NX_O75882 PharmGKB:PA25178
InParanoid:O75882 OMA:NPLKGTC OrthoDB:EOG4R23SZ PhylomeDB:O75882
ChiTaRS:ATRN GenomeRNAi:8455 NextBio:31642 ArrayExpress:O75882
Bgee:O75882 Genevestigator:O75882 GermOnline:ENSG00000088812
Uniprot:O75882
Length = 1429
Score = 226 (84.6 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 42/110 (38%), Positives = 61/110 (55%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HS C++ IC++C + TTG HC+ C +G YG+ T C+ C CN
Sbjct: 1055 WSFIHCPA-CQCNGHSKCINQ-SICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKCN 1112
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYY 163
H + +C++ TG+C C +G C+ C Y G+P G TCYY
Sbjct: 1113 GHAS----LCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLRG-TCYY 1157
Score = 59 (25.8 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
A C C+ G P C C GW G C +C
Sbjct: 98 AKECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQ-HC 132
Score = 52 (23.4 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 34 CYNKCIY---GYCKGPPDYSCQCELGWTGVDCSV 64
C + C + G C C C W G CSV
Sbjct: 287 CTDNCGFPHRGICNSSDVRGCSCFSDWQGPGCSV 320
>UNIPROTKB|I3LV27 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 EMBL:CU993814
Ensembl:ENSSSCT00000024191 Uniprot:I3LV27
Length = 1668
Score = 239 (89.2 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 59/150 (39%), Positives = 75/150 (50%)
Query: 57 WTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDC 115
+TG C V C C+ HS C G GIC C T G+HC+ C+ G YGNA C+ C C
Sbjct: 71 YTG-RC-VPCNCHGHSNRCKDGSGICINCQHNTAGEHCERCKEGYYGNAI-HGSCQACLC 127
Query: 116 NSHGNSVLGVCDSITG---ECICQDNTQGKNCERCLPGYYGDPTD-GGTCY-YQCMARGM 170
H NS C +TG C+C+ G CERC PGY+G+P GG+C C + G
Sbjct: 128 -PHSNSFATGC-IVTGGNMRCLCKPGYTGTLCERCAPGYFGNPQKFGGSCQPCNCNSNGQ 185
Query: 171 LTGPGPQGLGSGLAERNAWEGKDT-PSREC 199
L P G + + E KD+ P EC
Sbjct: 186 LVSCDPL-TGDCMNQ----EPKDSGPGEEC 210
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 30/71 (42%), Positives = 37/71 (52%)
Query: 94 QYCRAGSY-GNATTQEG-CRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPG 150
Q C G Y N G C C+C+ H N C +G CI CQ NT G++CERC G
Sbjct: 57 QGCSPGYYRDNKGFYTGRCVPCNCHGHSNR----CKDGSGICINCQHNTAGEHCERCKEG 112
Query: 151 YYGDPTDGGTC 161
YYG+ G +C
Sbjct: 113 YYGNAIHG-SC 122
>UNIPROTKB|F1LU77 [details] [associations]
symbol:F1LU77 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 GO:GO:0005610 IPI:IPI00768265
Ensembl:ENSRNOT00000015750 ArrayExpress:F1LU77 Uniprot:F1LU77
Length = 3149
Score = 247 (92.0 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 65/174 (37%), Positives = 81/174 (46%)
Query: 43 CKGPPDY---SCQ-CELGW-------TGVDCSVNCLCNNHST-CVHGIGICDECHDWTTG 90
C PPDY SCQ C G+ C V C CN HS C G G+C C T G
Sbjct: 1558 CTCPPDYTGDSCQGCRPGYYRDIKSFPAGRC-VPCNCNGHSNRCQDGSGVCINCQHNTAG 1616
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC--DSITGECICQDNTQGKNCERCL 148
+HC+ C+ G YG+A CR C C H NS C D C C+ G CERC
Sbjct: 1617 EHCERCQEGYYGSAI-HGSCRVCPC-PHTNSFATGCAVDGGAVRCACKPGYTGAQCERCA 1674
Query: 149 PGYYGDPTD-GGTCY-YQCMARGMLTGPGPQGLGSGLAERNAWEGKD-TPSREC 199
PGY+G+P GG+C C + G P G +++ E KD +P+ EC
Sbjct: 1675 PGYFGNPQKFGGSCQPCNCNSNGQFGTCDPL-TGDCVSQ----EPKDGSPAEEC 1723
Score = 157 (60.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 45/149 (30%), Positives = 60/149 (40%)
Query: 39 IYGYCKGPPDY---SCQ-CELGWTG----VDCSVNCLCNNHSTCVHGIGICDE------C 84
+ G C PP+ C+ CE+ C V C C+ T + CD C
Sbjct: 1226 VTGKCLCPPNTVRPQCEVCEMNSFNFHPVAGCEV-CNCSRKGTVEAAVSECDRDSGQCRC 1284
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
TG C C G Y C C CN G GVCD TG C+C++N +G C
Sbjct: 1285 KPRVTGQQCDKCAPGFYHFPE----CVPCSCNRDGTEP-GVCDPGTGACMCKENVEGPQC 1339
Query: 145 ERCLPG-YYGDPTDGGTCYYQCMARGMLT 172
+ C G +Y D + C +C G+ T
Sbjct: 1340 QFCREGSFYLDSANPEGCT-RCFCFGVNT 1367
Score = 147 (56.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 37/128 (28%), Positives = 54/128 (42%)
Query: 66 CLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN--SVL 123
C C C G C C T C+ C S+ N GC C+C+ G + +
Sbjct: 1216 CNCGRR-LCEEVTGKC-LCPPNTVRPQCEVCEMNSF-NFHPVAGCEVCNCSRKGTVEAAV 1272
Query: 124 GVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGL 183
CD +G+C C+ G+ C++C PG+Y P + C C G G G G+ +
Sbjct: 1273 SECDRDSGQCRCKPRVTGQQCDKCAPGFYHFP-ECVPC--SCNRDGTEPGVCDPGTGACM 1329
Query: 184 AERNAWEG 191
+ N EG
Sbjct: 1330 CKENV-EG 1336
Score = 146 (56.5 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 43/140 (30%), Positives = 55/140 (39%)
Query: 29 FNASLCYNKCIYGYCKGP--------PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGI 80
F+ C C GY P PDY+ E G C CN I
Sbjct: 352 FSGDFC-ETCADGYYNFPFCLRIPVFPDYTLNPEDPMAGN--IKGCDCNLEGVLPE---I 405
Query: 81 CDE-----CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECIC 135
CD+ C G C CR+GSY C+ C C++ G+ + CD TG+C C
Sbjct: 406 CDDRGRCLCRPGVEGPRCDSCRSGSYSFPI----CQACQCSTSGSYPVP-CDPETGQCEC 460
Query: 136 QDNTQGKNCERCLPGYYGDP 155
G+ C+RCL G Y P
Sbjct: 461 LPGVTGRRCDRCLSGAYDFP 480
Score = 141 (54.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/92 (33%), Positives = 46/92 (50%)
Query: 62 CSVNCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCD 114
CS C C+ T V GIG C + C TGD C C G + + GC+ C
Sbjct: 531 CS-ECQCHEAGT-VSGIGECGQEDGDCSCKAHVTGDACDTCADGYFSLEKSNYFGCQGCQ 588
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
C+ G ++ +C +GEC C+++ +GK C+R
Sbjct: 589 CDI-GGALTTMCSGPSGECQCREHIEGKQCQR 619
Score = 134 (52.2 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 46/171 (26%), Positives = 63/171 (36%)
Query: 28 IFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHST--CVHGIGICD--- 82
I A C Y P C+C G TG C CL + C +CD
Sbjct: 435 ICQACQCSTSGSYPVPCDPETGQCECLPGVTGRRCD-RCLSGAYDFPYCQGSSSVCDPAG 493
Query: 83 ---------ECHDWTTGDHCQYCRAGSYGNATTQ-EGCRKCDCNSHGN-SVLGVCDSITG 131
+C T C C+ + A GC +C C+ G S +G C G
Sbjct: 494 TMDSSLGYCQCKLHVTSPTCSVCKPLYWDLAKENPRGCSECQCHEAGTVSGIGECGQEDG 553
Query: 132 ECICQDNTQGKNCERCLPGYYG-DPTDGGTCY-YQCMARGMLTG--PGPQG 178
+C C+ + G C+ C GY+ + ++ C QC G LT GP G
Sbjct: 554 DCSCKAHVTGDACDTCADGYFSLEKSNYFGCQGCQCDIGGALTTMCSGPSG 604
Score = 70 (29.7 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 289 SEGF-NATYQIFSCPDKCPEN---RTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNH 342
SEG +A Q + P P N R C + +C+CPP P C E+C F
Sbjct: 1197 SEGSAHAVQQYYGFPHCKPCNCGRRLCEEVTGKCLCPPNTVRPQC--EVCEMNSFNFHPV 1254
Query: 343 GTCDL 347
C++
Sbjct: 1255 AGCEV 1259
Score = 53 (23.7 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 309 RTCINNQCVCPPRRTGPDCQ 328
R + C CPP TG CQ
Sbjct: 1551 RAHLVEMCTCPPDYTGDSCQ 1570
Score = 51 (23.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECH 337
+ QC C PR TG C ++ P H
Sbjct: 1279 SGQCRCKPRVTGQQC-DKCAPGFYH 1302
Score = 45 (20.9 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 214 PADIILLRLQPDINV 228
P D++LL QPD+ +
Sbjct: 1450 PGDMVLLEKQPDVQL 1464
Score = 42 (19.8 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 315 QCVCPPRRTGPDCQ 328
+C C P TG C+
Sbjct: 1658 RCACKPGYTGAQCE 1671
Score = 41 (19.5 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 206 SLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGG 250
SLD +T+P ++ D + A+Y+ DG F GG
Sbjct: 2918 SLDIQTTSPKGLVFYTGTKDSFL-----ALYVADGRVVFALGAGG 2957
Score = 40 (19.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 316 CVCPPRRTGPDCQ 328
C+C GP CQ
Sbjct: 1328 CMCKENVEGPQCQ 1340
>UNIPROTKB|F1SBB3 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 EMBL:CU993814 Ensembl:ENSSSCT00000004108 OMA:RAANQSS
Uniprot:F1SBB3
Length = 1724
Score = 239 (89.2 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 59/150 (39%), Positives = 75/150 (50%)
Query: 57 WTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDC 115
+TG C V C C+ HS C G GIC C T G+HC+ C+ G YGNA C+ C C
Sbjct: 71 YTG-RC-VPCNCHGHSNRCKDGSGICINCQHNTAGEHCERCKEGYYGNAI-HGSCQACLC 127
Query: 116 NSHGNSVLGVCDSITG---ECICQDNTQGKNCERCLPGYYGDPTD-GGTCY-YQCMARGM 170
H NS C +TG C+C+ G CERC PGY+G+P GG+C C + G
Sbjct: 128 -PHSNSFATGC-IVTGGNMRCLCKPGYTGTLCERCAPGYFGNPQKFGGSCQPCNCNSNGQ 185
Query: 171 LTGPGPQGLGSGLAERNAWEGKDT-PSREC 199
L P G + + E KD+ P EC
Sbjct: 186 LVSCDPL-TGDCMNQ----EPKDSGPGEEC 210
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 30/71 (42%), Positives = 37/71 (52%)
Query: 94 QYCRAGSY-GNATTQEG-CRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPG 150
Q C G Y N G C C+C+ H N C +G CI CQ NT G++CERC G
Sbjct: 57 QGCSPGYYRDNKGFYTGRCVPCNCHGHSNR----CKDGSGICINCQHNTAGEHCERCKEG 112
Query: 151 YYGDPTDGGTC 161
YYG+ G +C
Sbjct: 113 YYGNAIHG-SC 122
>UNIPROTKB|P25391 [details] [associations]
symbol:LAMA1 "Laminin subunit alpha-1" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IDA;IPI] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=TAS] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0030155
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005911
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 DrugBank:DB00015 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 EMBL:AP002409 EMBL:AP005062 EMBL:AP005210 EMBL:X58531
IPI:IPI00375294 PIR:S14458 RefSeq:NP_005550.2 UniGene:Hs.270364
ProteinModelPortal:P25391 SMR:P25391 DIP:DIP-29324N
MINT:MINT-6740485 STRING:P25391 PhosphoSite:P25391 PaxDb:P25391
PRIDE:P25391 Ensembl:ENST00000389658 GeneID:284217 KEGG:hsa:284217
UCSC:uc002knm.3 CTD:284217 GeneCards:GC18M006941 H-InvDB:HIX0014316
HGNC:HGNC:6481 HPA:CAB010179 MIM:150320 neXtProt:NX_P25391
PharmGKB:PA30270 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 InParanoid:P25391 KO:K05637 OMA:EPFYWRL
OrthoDB:EOG4K3KVB ChiTaRS:LAMA1 GenomeRNAi:284217 NextBio:94628
ArrayExpress:P25391 Bgee:P25391 CleanEx:HS_LAMA1
Genevestigator:P25391 GermOnline:ENSG00000101680 GO:GO:0005606
GO:GO:0005608 Uniprot:P25391
Length = 3075
Score = 212 (79.7 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 50/146 (34%), Positives = 68/146 (46%)
Query: 29 FNASLCYNKCIYGYCKGP--PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHD 86
++ + C +C GY P P SC DCS N + C G C +C
Sbjct: 823 YSGAWC-ERCADGYYGNPTVPGESC------VPCDCSGNVDPSEAGHCDSVTGECLKCLG 875
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
T G HC+ C G YG+A T + CR C+C+ G S VC TG C C+ N G+ C++
Sbjct: 876 NTDGAHCERCADGFYGDAVTAKNCRACECHVKG-SHSAVCHLETGLCDCKPNVTGQQCDQ 934
Query: 147 CLPGYYGDPTDGGTCYYQCMARGMLT 172
CL GYYG + G C G ++
Sbjct: 935 CLHGYYGLDSGHGCRPCNCSVAGSVS 960
Score = 203 (76.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 49/120 (40%), Positives = 59/120 (49%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDC-NSHGN 120
V C CNNHS TC G C C D T GDHC C +G YG T + C C C +S
Sbjct: 1401 VPCSCNNHSDTCDPNTGKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPA 1460
Query: 121 SVLGVCDSITGE----C-ICQDNTQGKNCERCLPGYYGDP-TDGGTCYY-QCMARGMLTG 173
S C + G+ C C +GK+CERC YYG+P T GG+C C G + G
Sbjct: 1461 SFSPTC-VLEGDHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHG 1519
Score = 197 (74.4 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 46/118 (38%), Positives = 60/118 (50%)
Query: 61 DCSVNCLCNNHS-------TCV----HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG 109
DC++ C C HS TCV H CD C G HC+ C + YGN T G
Sbjct: 1448 DCAL-CACP-HSPPASFSPTCVLEGDHDFR-CDACLLGYEGKHCERCSSSYYGNPQTPGG 1504
Query: 110 -CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
C+KCDCN HG SV G CD +G+C+C+ G C+ C P + TD +C +C+
Sbjct: 1505 SCQKCDCNPHG-SVHGDCDRTSGQCVCRLGASGLRCDECEPRHILMETDCVSCDDECV 1561
Score = 169 (64.5 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 50/149 (33%), Positives = 64/149 (42%)
Query: 42 YCKGPPDY---SCQ-CELGWTGVD-------CSVNCLCNNHST-C-VHGIGICDECHDWT 88
+C+ P Y SC+ C G+ VD C C C+ H+ C VHG+ C C T
Sbjct: 708 HCECPQGYTGTSCESCLSGYYRVDGILFGGICQP-CECHGHAAECNVHGV--CIACAHNT 764
Query: 89 TGDHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSITGECI----CQDNTQ 140
TG HC+ C G YG + T C+ C C N+ C G+ + C
Sbjct: 765 TGVHCEQCLPGFYGEPSRGTPGDCQPCACPLTIASNNFSPTCHLNDGDEVVCDWCAPGYS 824
Query: 141 GKNCERCLPGYYGDPTDGGTCYYQCMARG 169
G CERC GYYG+PT G C G
Sbjct: 825 GAWCERCADGYYGNPTVPGESCVPCDCSG 853
Score = 164 (62.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 48/150 (32%), Positives = 65/150 (43%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---C-QCELGWTGVDCSVNCL-CNNHSTCVHGIGICDE- 83
++++C+ + G C P+ + C QC G+ G+D C CN G DE
Sbjct: 910 HSAVCHLET--GLCDCKPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSDGCTDEG 967
Query: 84 -CH--DWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CH G C C G Y Q+G C CDC N+ CD TGEC+C +T
Sbjct: 968 QCHCVPGVAGKRCDRCAHGFYAY---QDGSCTPCDCPHTQNT----CDPETGECVCPPHT 1020
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
QG CE C G++G + G C G
Sbjct: 1021 QGVKCEECEDGHWGYDAEVGCQACNCSLVG 1050
Score = 155 (59.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 44/124 (35%), Positives = 62/124 (50%)
Query: 38 CIYGYCK----GP-PDYSCQ-CELGWTGVDCSVNCLCNN-HSTCVHGI--GICDECHDWT 88
CI GY + P D C+ C G SV C+ ++ HS +G G C C +
Sbjct: 376 CIDGYYRPHKVSPYEDEPCRPCNCDPVGSLSSV-CIKDDLHSDLHNGKQPGQCP-CKEGY 433
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL 148
TG+ C C+ G Y + T C C CN G++ C TG C+C++N +GK C+RC
Sbjct: 434 TGEKCDRCQLG-YKDYPT---CVSCGCNPVGSASDEPC---TGPCVCKENVEGKACDRCK 486
Query: 149 PGYY 152
PG+Y
Sbjct: 487 PGFY 490
Score = 143 (55.4 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 36/105 (34%), Positives = 49/105 (46%)
Query: 66 CLC-NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG 124
C C + +TC G C C T G C+ C G +G + GC+ C+C+ G S
Sbjct: 998 CDCPHTQNTCDPETGEC-VCPPHTQGVKCEECEDGHWGY-DAEVGCQACNCSLVG-STHH 1054
Query: 125 VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
CD +TG C C+ G+ C++C GY P D C C RG
Sbjct: 1055 RCDVVTGHCQCKSKFGGRACDQCSLGYRDFP-DCVPC--DCDLRG 1096
Score = 135 (52.6 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 34/94 (36%), Positives = 44/94 (46%)
Query: 65 NCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS-YGNATTQEGCRKCDCNSHGNSVL 123
NC+C + +G C D G H AGS G C C CN+H ++
Sbjct: 1361 NCVCPPGT-----VGF--SCQDCAPGYHRGKLPAGSDRGPRPLVAPCVPCSCNNHSDT-- 1411
Query: 124 GVCDSITGECI-CQDNTQGKNCERCLPGYYGDPT 156
CD TG+C+ C DNT G +C+ C GYYG T
Sbjct: 1412 --CDPNTGKCLNCGDNTAGDHCDVCTSGYYGKVT 1443
Score = 129 (50.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 44/149 (29%), Positives = 54/149 (36%)
Query: 41 GYCKGPPD---YSCQ-CELGWTGVDCSVNC-LCN------NHSTCVHGIGICDECHDWTT 89
G C PP C+ CE G G D V C CN H C G C +C
Sbjct: 1012 GECVCPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHC-QCKSKFG 1070
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS------VLGVCDSI--TGECICQDNTQG 141
G C C G Y + C CDC+ G S G+C + TG C C++N G
Sbjct: 1071 GRACDQCSLG-YRDFPD---CVPCDCDLRGTSGDACNLEQGLCGCVEETGACPCKENVFG 1126
Query: 142 KNCERCLPGYYGDPTDGGTCYYQCMARGM 170
C C G + D C G+
Sbjct: 1127 PQCNECREGTFALRADNPLGCSPCFCSGL 1155
Score = 116 (45.9 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 31/95 (32%), Positives = 44/95 (46%)
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYG----NATTQEGCRKCDCNSHGNSVLGVC--DSI- 129
G G+C C T G +C+ C G Y + E CR C+C+ G S+ VC D +
Sbjct: 357 GGGVCINCLQNTMGINCETCIDGYYRPHKVSPYEDEPCRPCNCDPVG-SLSSVCIKDDLH 415
Query: 130 --------TGECICQDNTQGKNCERCLPGYYGDPT 156
G+C C++ G+ C+RC GY PT
Sbjct: 416 SDLHNGKQPGQCPCKEGYTGEKCDRCQLGYKDYPT 450
Score = 110 (43.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 31/95 (32%), Positives = 41/95 (43%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCEL-GWTGVDCSVNC-LCNNHSTCVHGIGICDECHD 86
F C ++C GY P C C+L G +G C++ LC CV G C C +
Sbjct: 1069 FGGRAC-DQCSLGYRDFPDCVPCDCDLRGTSGDACNLEQGLCG----CVEETGACP-CKE 1122
Query: 87 WTTGDHCQYCRAGSYG-NATTQEGCRKCDCN--SH 118
G C CR G++ A GC C C+ SH
Sbjct: 1123 NVFGPQCNECREGTFALRADNPLGCSPCFCSGLSH 1157
Score = 106 (42.4 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 36/110 (32%), Positives = 44/110 (40%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC--- 113
W + C C H+TC C+ C G H Q R G+ + T E C C
Sbjct: 281 WDETTKKLQCQCE-HNTCGES---CNRC---CPGYHQQPWRPGTVSSGNTCEACN-CHNK 332
Query: 114 --DCNSHGNSVLGVCDSIT--------GECI-CQDNTQGKNCERCLPGYY 152
DC + SV S+ G CI C NT G NCE C+ GYY
Sbjct: 333 AKDCY-YDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETCIDGYY 381
Score = 95 (38.5 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 113 CDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPTDGGT 160
C C H +S D T +C C+ NT G++C RC PGY+ P GT
Sbjct: 270 CICYGHASSC--PWDETTKKLQCQCEHNTCGESCNRCCPGYHQQPWRPGT 317
Score = 82 (33.9 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 289 SEGFNATYQIFSC-PDKCPENR-TCI--NNQCVCPPRRTGPDCQE 329
+ GF A YQ SC P CP + TC +CVCPP G C+E
Sbjct: 984 AHGFYA-YQDGSCTPCDCPHTQNTCDPETGECVCPPHTQGVKCEE 1027
Score = 69 (29.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 128 SITGECICQDNTQGKNCERCLPGYYGDPTDGGT 160
S+ C+C T G +C+ C PGY+ G+
Sbjct: 1357 SLLENCVCPPGTVGFSCQDCAPGYHRGKLPAGS 1389
Score = 53 (23.7 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 306 PENRTC-INNQCVCPPRRTGPDCQE 329
PE + CVCPP G CQ+
Sbjct: 1351 PEEEVASLLENCVCPPGTVGFSCQD 1375
Score = 45 (20.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 305 CPENRTCIN-NQCVC-----PPRRTGPDCQEEICP 333
C N T ++ QC+ P R T DCQ CP
Sbjct: 760 CAHNTTGVHCEQCLPGFYGEPSRGTPGDCQPCACP 794
Score = 40 (19.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 311 CINNQCVCPPRRT--GPDCQEEICPNECHE 338
C+ CP + GP C NEC E
Sbjct: 1111 CVEETGACPCKENVFGPQC------NECRE 1134
Score = 39 (18.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 6/14 (42%), Positives = 7/14 (50%)
Query: 316 CVCPPRRTGPDCQE 329
C C P TG C +
Sbjct: 921 CDCKPNVTGQQCDQ 934
Score = 39 (18.8 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 316 CVCPPRRTGPDCQ 328
C CP TG C+
Sbjct: 709 CECPQGYTGTSCE 721
Score = 39 (18.8 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 286 GKPSEGFNATYQIFSCPDKCPENR---TC-INN--QCVCP---PRRTGPDCQ 328
G+PS G Q +CP N TC +N+ + VC P +G C+
Sbjct: 778 GEPSRGTPGDCQPCACPLTIASNNFSPTCHLNDGDEVVCDWCAPGYSGAWCE 829
>UNIPROTKB|K7GNE0 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CU302393 EMBL:CU468397
Ensembl:ENSSSCT00000035365 Uniprot:K7GNE0
Length = 1260
Score = 226 (84.6 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 42/110 (38%), Positives = 61/110 (55%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HS CV+ +C++C + TTG HC+ C +G YG+ T C+ C CN
Sbjct: 886 WSFIHCPA-CQCNGHSKCVNQ-SVCEKCENLTTGRHCETCISGFYGDPTNGGKCQPCKCN 943
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPG--YYGDPTDGGTCYY 163
H + +C++ TG+C C +G C+ C Y G+P G TCYY
Sbjct: 944 GHAS----LCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLKG-TCYY 988
Score = 57 (25.1 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 12/34 (35%), Positives = 13/34 (38%)
Query: 34 CYNKCIY---GYCKGPPDYSCQCELGWTGVDCSV 64
C N C + G C C C W G CSV
Sbjct: 118 CVNNCGFPHRGICNSSDVRGCSCFSEWQGPGCSV 151
>WB|WBGene00006432 [details] [associations]
symbol:tag-53 species:6239 "Caenorhabditis elegans"
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR000742 InterPro:IPR002165
InterPro:IPR006652 InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 GO:GO:0018991
GO:GO:0040011 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
EMBL:AF339882 EMBL:Z69790 PIR:T21694 RefSeq:NP_001024625.2
RefSeq:NP_510443.4 UniGene:Cel.8097 ProteinModelPortal:Q19981
SMR:Q19981 MINT:MINT-1127971 STRING:Q19981 PaxDb:Q19981
PRIDE:Q19981 EnsemblMetazoa:F33C8.1a GeneID:181566
KEGG:cel:CELE_F33C8.1 UCSC:F33C8.1b CTD:181566 WormBase:F33C8.1a
WormBase:F33C8.1b HOGENOM:HOG000018337 InParanoid:Q19981
OMA:MVVIFGH NextBio:914466 Uniprot:Q19981
Length = 1329
Score = 237 (88.5 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 46/136 (33%), Positives = 66/136 (48%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGI--------CDECHDWTT 89
CI G GP + + W +DC C CN HSTC +G C C + TT
Sbjct: 919 CIRGTSTGPLEPKPENST-WYFIDCPA-CQCNGHSTCFTSVGSFPPVTIEKCQSCQNHTT 976
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN-TQGKNCERCL 148
G HC+ C G YG+A C CDC+ + +CD ++G+C C+ G C++C
Sbjct: 977 GAHCERCAPGFYGDARNGGVCSPCDCHHQAD----MCDPVSGQCFCKTKGVTGDRCDKCE 1032
Query: 149 PGYYGDPTDGGTCYYQ 164
Y G+P +G C+Y+
Sbjct: 1033 AKYVGNPRNGTPCFYE 1048
Score = 115 (45.5 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 37/134 (27%), Positives = 55/134 (41%)
Query: 230 CNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPS 289
C + +YIYDG SV G L C E + + A SG +H+
Sbjct: 144 CGWDYLYIYDG-----DSVYGKQ----LAALCGEQPSQEFT---AASGKALVHFFSDLAI 191
Query: 290 E--GFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICP-------NECHEF- 339
GFN +Y+ C C + +C+N +C C G +C+ ++C + CHE
Sbjct: 192 NLNGFNVSYESNRCAYNCSNHGSCLNGKCDCEDGYKGLNCEYQVCQLSGKSTESPCHEGQ 251
Query: 340 LNHGTCDLLLTGVH 353
G C+ L VH
Sbjct: 252 CVDGRCECLSARVH 265
Score = 55 (24.4 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
S C C G C +C C GW G C +C
Sbjct: 64 SSCDKPCYNGVCLNK---ACVCSKGWYGSQCD-HC 94
>UNIPROTKB|F1NQC4 [details] [associations]
symbol:F1NQC4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
GeneTree:ENSGT00700000104042 EMBL:AADN02026516 IPI:IPI00578210
Ensembl:ENSGALT00000005827 OMA:ALADCEC Uniprot:F1NQC4
Length = 175
Score = 167 (63.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 36/97 (37%), Positives = 50/97 (51%)
Query: 65 NCLCNNHST-CVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EG-CRKCDC 115
+C C HS C + + C C T G HCQ+CR G Y N++ + E C +C+C
Sbjct: 1 DCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGFYRNSSAELDDENVCIECNC 60
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
N G S+ C+ TG C C++ G C+ CLP YY
Sbjct: 61 NQIG-SLHDRCNE-TGYCECKEGATGPKCDDCLPNYY 95
Score = 152 (58.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 37/100 (37%), Positives = 49/100 (49%)
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQ---EG-CRKCDCNSHGNSVLGVCDSITGECICQ 136
C C T G HCQ+CR G Y N++ + E C +C+CN G S+ C+ TG C C+
Sbjct: 22 CVSCKHNTRGQHCQHCRLGFYRNSSAELDDENVCIECNCNQIG-SLHDRCNE-TGYCECK 79
Query: 137 DNTQGKNCERCLPGYYGD----PT----------DGGTCY 162
+ G C+ CLP YY P +GGTCY
Sbjct: 80 EGATGPKCDDCLPNYYWRQGCFPNVCDDELLLCQNGGTCY 119
Score = 65 (27.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 301 CPDK---CPENRTCINNQ-CVCPPRRTGPDCQEEIC 332
C D+ C TC NQ C+CP G CQ+ C
Sbjct: 105 CDDELLLCQNGGTCYQNQRCICPVGFKGVLCQQSRC 140
>UNIPROTKB|F1MER7 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005615 GO:GO:0008104 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
GO:GO:0048704 GO:GO:0002062 GO:GO:0001958 Pfam:PF02210
GO:GO:0060351 Pfam:PF12661 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 OMA:GVTQQCA
EMBL:DAAA02006470 EMBL:DAAA02006471 IPI:IPI01000857 IntAct:F1MER7
Ensembl:ENSBTAT00000022744 Uniprot:F1MER7
Length = 4374
Score = 222 (83.2 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 66/212 (31%), Positives = 92/212 (43%)
Query: 38 CIYGYCKGPPDYSCQ-CELGWTGVDCSV------NCLCNNHS-TCVHGIGICDECHDWTT 89
C GY +GP SCQ C+ G+T + + C C+ H+ C G C EC T
Sbjct: 1107 CPPGY-RGP---SCQDCDAGYTRMPSGLYLGTCERCSCHGHTEVCEPETGACQECQHHTE 1162
Query: 90 GDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSVLG----VCDSIT-GE--C-ICQDNT 139
G C+ C+ G YG+A T C+ C C HG G C T G C C
Sbjct: 1163 GPRCEQCQPGYYGDAQRGTPHDCQPCPC--HGAPAAGQATHTCFLDTDGHPTCDACSPGH 1220
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSREC 199
G++CERC PGYYG+P+ G C + G L P+ +G G + + + P+ +C
Sbjct: 1221 SGRHCERCAPGYYGNPSQGQPCR---RSGGQL----PEQIGCGCDPQGSVSNQCDPAGQC 1273
Query: 200 LWIIG-QSLDSNSTAPADIILLRLQPDINVPC 230
+ L + P L PD +PC
Sbjct: 1274 QCKAQVEGLTCSQCRPHHFHLSASNPDGCLPC 1305
Score = 209 (78.6 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 53/143 (37%), Positives = 69/143 (48%)
Query: 43 CKGPPDY---SCQ-CELGWT----GV---DCSVNCLCNNHSTCVHG-IGICDECHDWTTG 90
C+ PP Y SCQ C G+T G+ C + C CN HS H G C +C G
Sbjct: 1510 CRCPPGYVGSSCQDCAPGYTRTGSGLYLGHCEL-CECNGHSDLCHPETGACSQCQHHAAG 1568
Query: 91 DHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSI-TG--ECI-CQDNTQGK 142
+ C+ C G YG+AT T E C+ C C + N C+S+ G C C+ G+
Sbjct: 1569 EFCEQCAPGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQ 1628
Query: 143 NCERCLPGYYGDPT-DGGTCYYQ 164
CE+C PGY G+P GG C Q
Sbjct: 1629 YCEQCAPGYVGNPNVPGGRCLPQ 1651
Score = 156 (60.0 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 48/140 (34%), Positives = 59/140 (42%)
Query: 43 CKGPPDYS---CQ-CELGWTGVD-------CSVNCLCNNH-STCVHGIGICDECHDWTTG 90
C+ P YS C+ C+ +T V CS C CN H S+C G C C T G
Sbjct: 710 CRCPIGYSGLSCESCDAHFTRVPGGPYLGTCS-GCNCNGHASSCDPVYGHCLNCQHNTEG 768
Query: 91 DHCQYCRAGSYGNAT--TQEGCRKCDCN--SHGNSVLGVCDSIT-GE--C-ICQDNTQGK 142
C C+AG +G+AT T CR C C C T G+ C C G+
Sbjct: 769 PQCNKCKAGFFGDATKATATACRPCPCPYIDASRRFSDTCFLDTDGQATCDACAPGYTGR 828
Query: 143 NCERCLPGYYGDPTD-GGTC 161
CE C GY G+P G C
Sbjct: 829 RCESCAAGYEGNPIQPNGKC 848
Score = 130 (50.8 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 28/84 (33%), Positives = 39/84 (46%)
Query: 76 HGIGICDECHDWTTGDHCQYCRAG--SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGEC 133
H + C C +G C+ C A C C+CN H +S CD + G C
Sbjct: 705 HSVEEC-RCPIGYSGLSCESCDAHFTRVPGGPYLGTCSGCNCNGHASS----CDPVYGHC 759
Query: 134 I-CQDNTQGKNCERCLPGYYGDPT 156
+ CQ NT+G C +C G++GD T
Sbjct: 760 LNCQHNTEGPQCNKCKAGFFGDAT 783
Score = 70 (29.7 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 303 DKCPENRTCINNQCVCPPRRTGPDCQ 328
+ C TC C+CPP +GP CQ
Sbjct: 4134 EPCLHGGTCQGTHCLCPPGFSGPRCQ 4159
Score = 66 (28.3 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 20/64 (31%), Positives = 27/64 (42%)
Query: 289 SEGFNATYQIFSCPDK-CPENRTCI-----NNQCVCPPRRTGPDCQEEICPNECHE-FLN 341
S+G Y C + C TC+ QC+C G C+ E P + HE L+
Sbjct: 4079 SQGVGQCYDSSPCERQPCRHGATCMPAGEYEFQCLCRDGFKGDLCEHEENPCQLHEPCLH 4138
Query: 342 HGTC 345
GTC
Sbjct: 4139 GGTC 4142
Score = 62 (26.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 315 QCVCPPRRTGPDCQE-EICPNECHEFLNHGTCD 346
QC CPP GP CQ+ + L GTC+
Sbjct: 1104 QCACPPGYRGPSCQDCDAGYTRMPSGLYLGTCE 1136
Score = 53 (23.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 297 QIFSC-PDKCPENRTCINNQ------CVCPPRRTGPDCQEEI 331
Q C P+ C + TC+N C C R+G C+E +
Sbjct: 3867 QALHCHPEACGPDATCVNRPDGHGYTCRCHLGRSGMRCEEGV 3908
Score = 50 (22.7 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 300 SCPDK-CPENRTCINNQ-----CVCPPRRTGPDCQEEICPNECH 337
+C D+ C C +++ CVCP TG C+ + CH
Sbjct: 3830 TCRDRPCQNGGQCQDSESSSYVCVCPAGFTGSRCEHSQALH-CH 3872
Score = 48 (22.0 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 315 QCVCPPRRTGPDCQE 329
+C CPP G CQ+
Sbjct: 1509 ECRCPPGYVGSSCQD 1523
Score = 41 (19.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 323 TGPDCQEEICPNECHEFLNHGTCDLLLTG 351
T DCQ CP E + TC+ L G
Sbjct: 1586 TPEDCQPCACPLTNPENMFSRTCESLGAG 1614
Score = 40 (19.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 224 PDINVPCN-ENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
P NV N + ++Y+ G P+ GG S G C +++
Sbjct: 4303 PGPNVAVNTKGSIYV-GGAPNVAVLTGGRFSSGITG--CIKNL 4342
>RGD|628776 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005608 "laminin-3 complex"
evidence=IDA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005913 "cell-cell adherens junction" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030056 "hemidesmosome"
evidence=IDA] [GO:0031581 "hemidesmosome assembly" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
RGD:628776 GO:GO:0030155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005913 GO:GO:0030334
GO:GO:0016337 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0030056 Pfam:PF02210
GO:GO:0031581 GO:GO:0045995 eggNOG:NOG292643 GO:GO:0005606
GO:GO:0005608 HOGENOM:HOG000048708 HOVERGEN:HBG100777 EMBL:U61261
IPI:IPI00189741 UniGene:Rn.10597 HSSP:P35070
ProteinModelPortal:P70570 STRING:P70570 PRIDE:P70570
UCSC:RGD:628776 NextBio:657622 Genevestigator:P70570 Uniprot:P70570
Length = 1725
Score = 237 (88.5 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 55/143 (38%), Positives = 70/143 (48%)
Query: 63 SVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
SV C CN HS C G G+C C T G+HC+ C+ G YG+A CR C C H NS
Sbjct: 75 SVPCNCNGHSNRCQDGSGVCINCQHNTAGEHCERCKRGYYGSAI-HGSCRVCPC-PHTNS 132
Query: 122 VLGVC--DSITGECICQDNTQGKNCERCLPGYYGDPTD-GGTCY-YQCMARGMLTGPGPQ 177
C D C C+ G CERC PGY+G+P GG+C C + G P
Sbjct: 133 FATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKFGGSCQPCNCNSNGQFGTCDPL 192
Query: 178 GLGSGLAERNAWEGKD-TPSREC 199
G +++ E KD +P+ EC
Sbjct: 193 -TGDCVSQ----EPKDGSPAEEC 210
Score = 133 (51.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 30/71 (42%), Positives = 37/71 (52%)
Query: 94 QYCRAGSYGNATTQEGCRK--CDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPG 150
Q CR G Y + + R C+CN H N C +G CI CQ NT G++CERC G
Sbjct: 57 QGCRPGYYRDIKSFPAGRSVPCNCNGHSNR----CQDGSGVCINCQHNTAGEHCERCKRG 112
Query: 151 YYGDPTDGGTC 161
YYG G +C
Sbjct: 113 YYGSAIHG-SC 122
Score = 41 (19.5 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 206 SLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGG 250
SLD +T+P ++ D + A+Y+ DG F GG
Sbjct: 1405 SLDIQTTSPKGLVFYAGTKDSFL-----ALYVADGRVVFALGAGG 1444
>MGI|MGI:96257 [details] [associations]
symbol:Hspg2 "perlecan (heparan sulfate proteoglycan 2)"
species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0002062 "chondrocyte differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007420 "brain development" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IMP] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IMP] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] Reactome:REACT_112621 InterPro:IPR000742
InterPro:IPR002172 InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057
PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181
SMART:SM00192 MGI:MGI:96257 GO:GO:0008104 GO:GO:0007420
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030198 GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0048738 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
Reactome:REACT_118324 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 SMART:SM00200 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 GO:GO:0005796
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
PDB:1GL4 PDBsum:1GL4 CTD:3339 eggNOG:NOG258321 HOGENOM:HOG000049276
HOVERGEN:HBG008174 KO:K06255 EMBL:M77174 EMBL:J04054 EMBL:J04055
IPI:IPI00113824 PIR:S18252 RefSeq:NP_032331.2 UniGene:Mm.273662
ProteinModelPortal:Q05793 SMR:Q05793 IntAct:Q05793 MINT:MINT-215413
STRING:Q05793 PhosphoSite:Q05793 PaxDb:Q05793 PRIDE:Q05793
GeneID:15530 KEGG:mmu:15530 EvolutionaryTrace:Q05793 NextBio:288458
CleanEx:MM_HSPG2 Genevestigator:Q05793
GermOnline:ENSMUSG00000028763 Uniprot:Q05793
Length = 3707
Score = 216 (81.1 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 54/140 (38%), Positives = 68/140 (48%)
Query: 43 CKGPPDY---SCQ-CELGWT----GV---DCSVNCLCNNHSTCVHG-IGICDECHDWTTG 90
C+ PP Y SCQ C G+T G+ C + C CN HS H G C C T G
Sbjct: 1530 CRCPPGYVGLSCQDCAPGYTRTGSGLYLGQCEL-CECNGHSDLCHPETGACSRCQHNTAG 1588
Query: 91 DHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSI-TG--ECI-CQDNTQGK 142
+ C+ C G YG+AT T E C+ C C + N C+S+ G C C+ G+
Sbjct: 1589 EFCELCATGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQ 1648
Query: 143 NCERCLPGYYGDPT-DGGTC 161
CE+C PGY GDP GG C
Sbjct: 1649 YCEQCAPGYEGDPNVQGGRC 1668
Score = 209 (78.6 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 57/160 (35%), Positives = 74/160 (46%)
Query: 38 CIYGYCKGPPDYSCQ-CELGWTGVDCSV------NCLCNNHS-TCVHGIGICDECHDWTT 89
C GY +GP SCQ C+ G+T V + C C+ HS TC G C C T
Sbjct: 1128 CPPGY-RGP---SCQDCDTGYTRVPSGLYLGTCERCNCHGHSETCEPETGACQSCQHHTE 1183
Query: 90 GDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSVLG----VCDSIT-GE--C-ICQDNT 139
G C+ C+ G YG+A T + C+ C C +G G C T G C C
Sbjct: 1184 GASCEQCQPGYYGDAQRGTPQDCQPCPC--YGAPAAGQAAHTCFLDTDGHPTCDSCSPGH 1241
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGML-TGPGPQG 178
G++CERC PGYYG+P+ G C+ +L G P G
Sbjct: 1242 SGRHCERCAPGYYGNPSQGQPCHRDGQVPEVLGCGCDPHG 1281
Score = 163 (62.4 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 50/143 (34%), Positives = 61/143 (42%)
Query: 37 KCIYGYCKGPPDYSCQ-CELGWTGVD-------CSVNCLCNNH-STCVHGIGICDECHDW 87
+C GY G SC+ C+ +T V CS C CN H S+C G C C
Sbjct: 732 RCPIGY-SG---LSCESCDAHFTRVPGGPYLGTCS-GCNCNGHASSCDPVYGHCLNCQHN 786
Query: 88 TTGDHCQYCRAGSYGNAT--TQEGCRKCDCN--SHGNSVLGVCDSIT-GE--C-ICQDNT 139
T G C C+ G +G+AT T CR C C C T G+ C C
Sbjct: 787 TEGPQCDKCKPGFFGDATKATATACRPCPCPYIDASRRFSDTCFLDTDGQATCDACAPGY 846
Query: 140 QGKNCERCLPGYYGDPTD-GGTC 161
G+ CE C PGY G+P GG C
Sbjct: 847 TGRRCESCAPGYEGNPIQPGGKC 869
Score = 144 (55.7 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRK---------CDCNSHGNSVLGVCDSITG 131
CD C +G HC+ C G YGN + + C + C C+ HG S+ CD+ G
Sbjct: 1234 CDSCSPGHSGRHCERCAPGYYGNPSQGQPCHRDGQVPEVLGCGCDPHG-SISSQCDA-AG 1291
Query: 132 ECICQDNTQGKNCERCLPGYY 152
+C C+ +G++C C P ++
Sbjct: 1292 QCQCKAQVEGRSCSHCRPHHF 1312
Score = 140 (54.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 29/84 (34%), Positives = 41/84 (48%)
Query: 76 HGIGICDECHDWTTGDHCQYCRAG--SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGEC 133
H + C C +G C+ C A C C+CN H +S CD + G C
Sbjct: 726 HSVEEC-RCPIGYSGLSCESCDAHFTRVPGGPYLGTCSGCNCNGHASS----CDPVYGHC 780
Query: 134 I-CQDNTQGKNCERCLPGYYGDPT 156
+ CQ NT+G C++C PG++GD T
Sbjct: 781 LNCQHNTEGPQCDKCKPGFFGDAT 804
Score = 72 (30.4 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 289 SEGFNATYQIFSCPDK-CPENRTCI-----NNQCVCPPRRTGPDCQEEICPNECHE-FLN 341
S+G Y C + C TC+ QC+C G C+ E P + HE LN
Sbjct: 3413 SQGVGQCYDSSPCERQPCRNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLN 3472
Query: 342 HGTC 345
GTC
Sbjct: 3473 GGTC 3476
Score = 62 (26.9 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 315 QCVCPPRRTGPDCQE-EICPNECHEFLNHGTCD 346
QC CPP GP CQ+ + L GTC+
Sbjct: 1125 QCTCPPGYRGPSCQDCDTGYTRVPSGLYLGTCE 1157
Score = 61 (26.5 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 303 DKCPENRTCINNQCVCPPRRTGPDCQE 329
+ C TC +C+C P +GP CQ+
Sbjct: 3468 EPCLNGGTCRGARCLCLPGFSGPRCQQ 3494
Score = 46 (21.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 315 QCVCPPRRTGPDCQE 329
+C CPP G CQ+
Sbjct: 1529 ECRCPPGYVGLSCQD 1543
Score = 44 (20.5 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 216 DIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
D++ R P NV N + G PD T G S G C +++
Sbjct: 3629 DLVTGR-SPGPNVAVNTKDIIYIGGAPDVATLTRGKFSSGITG--CIKNL 3675
Score = 41 (19.5 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 323 TGPDCQEEICPNECHEFLNHGTCDLLLTG 351
T DCQ CP E + TC+ L G
Sbjct: 1606 TPEDCQPCACPLTNPENMFSRTCESLGAG 1634
>UNIPROTKB|E1BXK1 [details] [associations]
symbol:LAMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] GO:GO:0008201 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610
OMA:DRCLPCN EMBL:AADN02034184 EMBL:AADN02034183 IPI:IPI00588334
Ensembl:ENSGALT00000007372 ArrayExpress:E1BXK1 Uniprot:E1BXK1
Length = 1175
Score = 209 (78.6 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 45/122 (36%), Positives = 63/122 (51%)
Query: 38 CIYGYCKGP-PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
C +G + P P +SC+ C G G CSV L +CD C G C++
Sbjct: 442 CPFGSYRDPRPPHSCRACPCGH-GQSCSV--LPGQEEV------VCDHCPPGAAGPRCEF 492
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYG 153
C G +G+ + CR C CNS+ + +G CD TGEC+ C NT G +CERC G++G
Sbjct: 493 CADGYFGDPAASQPCRPCQCNSNVEPNAVGNCDRRTGECLKCIYNTAGFHCERCKDGFFG 552
Query: 154 DP 155
+P
Sbjct: 553 NP 554
Score = 157 (60.3 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 43/137 (31%), Positives = 60/137 (43%)
Query: 56 GWTGVDC---SVNCLCNNHSTCVHGIGI-CDECHDWTTGDHCQYCRAGSYGNATTQEG-- 109
G DC S C+ + G G C C T G HC+ C+ G Y Q+G
Sbjct: 22 GGEACDCNGMSRQCVFDWQLLMETGNGYRCLGCLGNTAGAHCERCKEGYYRQ---QDGDC 78
Query: 110 CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
C C C+ G S+ CDS G C C+ G+ C+RC PG++ ++ G C + R
Sbjct: 79 CLPCRCHPQG-SLSTQCDS-NGRCSCRPGVMGEKCDRCQPGFHS-LSEAGCCPHCPRCRS 135
Query: 170 MLTGPGPQGLGSGLAER 186
L P G G ++ R
Sbjct: 136 QLCACDPAGTGDCVSGR 152
Score = 153 (58.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 52/170 (30%), Positives = 67/170 (39%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
C GY G P S C C+ N N C G C +C T G HC+ C+
Sbjct: 493 CADGYF-GDPAASQPCR----PCQCNSNVEPNAVGNCDRRTGECLKCIYNTAGFHCERCK 547
Query: 98 AGSYGNATTQ---EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC-LPGYYG 153
G +GN + CR C+CNS G L +C + G CIC+ G NCE+ P Y
Sbjct: 548 DGFFGNPLAPNPADKCRACNCNSVGAEPL-MCRN-DGSCICKPGFGGPNCEQSECPACYS 605
Query: 154 DPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWII 203
Y Q + L Q G + + EGK + E L I
Sbjct: 606 QVKAQVDLYLQQLQELELLSSEVQAGGGAVGQE--LEGKMQLAEETLQAI 653
Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 47/140 (33%), Positives = 55/140 (39%)
Query: 43 CKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCV----HGIGICD----ECH--DWTTGD 91
C+ P Y Q CE G + S CV HG GICD EC+ D G+
Sbjct: 380 CQCPDGYQGQFCERCAAGYRRDAPHM-GPFSICVPCNCHGGGICDPDTGECYSGDENVGN 438
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE----CI-CQDNTQGKNCER 146
C GSY + CR C C HG S C + G+ C C G CE
Sbjct: 439 SIS-CPFGSYRDPRPPHSCRACPCG-HGQS----CSVLPGQEEVVCDHCPPGAAGPRCEF 492
Query: 147 CLPGYYGDPTDGGTCY-YQC 165
C GY+GDP C QC
Sbjct: 493 CADGYFGDPAASQPCRPCQC 512
Score = 122 (48.0 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 32/115 (27%), Positives = 44/115 (38%)
Query: 61 DCSVNCLCNNH---STCVHGIGICDECHDWTTGDHCQYCRAG--SYGNATTQEGCRKCDC 115
DC + C C+ ST G C C G+ C C+ G S A C +C
Sbjct: 77 DCCLPCRCHPQGSLSTQCDSNGRCS-CRPGVMGEKCDRCQPGFHSLSEAGCCPHCPRCRS 135
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGTCYYQCMARG 169
G D ++G CIC+ G+ C+RC +Y D + C C G
Sbjct: 136 QLCACDPAGTGDCVSGRCICKVGVTGERCDRCKQNFYNLDARNPAGCS-PCFCYG 189
Score = 82 (33.9 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 20/59 (33%), Positives = 25/59 (42%)
Query: 66 CLCNNHST--CVHGIGICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNS 121
C C+ T CV G IC TG+ C C+ Y +A GC C C H +S
Sbjct: 138 CACDPAGTGDCVSGRCICKV---GVTGERCDRCKQNFYNLDARNPAGCSPCFCYGHSSS 193
Score = 69 (29.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 124 GVCDSITGECICQDNTQGKNCERCLPGYYGD 154
GV C C D QG+ CERC GY D
Sbjct: 371 GVLAPWVERCQCPDGYQGQFCERCAAGYRRD 401
Score = 67 (28.6 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 300 SCPDKCPENRTCINN-QCVCPPRRTGPDCQEEICPNECH 337
+C E C N+ C+C P GP+C++ CP C+
Sbjct: 567 NCNSVGAEPLMCRNDGSCICKPGFGGPNCEQSECP-ACY 604
Score = 43 (20.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 318 CPPRRTGPDCQEEIC 332
CPP GP C E C
Sbjct: 481 CPPGAAGPRC--EFC 493
>MGI|MGI:99892 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005608
"laminin-3 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0009888 "tissue
development" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043256
"laminin complex" evidence=IDA] [GO:0045198 "establishment of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IMP] [GO:0061304 "retinal blood vessel
morphogenesis" evidence=IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99892 GO:GO:0030155 GO:GO:0007155
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 Reactome:REACT_127416 GO:GO:0007166
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 Pfam:PF02210 GO:GO:0045198 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
EMBL:J04064 EMBL:X07737 EMBL:X13459 EMBL:M36775 IPI:IPI00113726
PIR:A31771 RefSeq:NP_032506.2 UniGene:Mm.303386 PDB:2JD4
PDBsum:2JD4 ProteinModelPortal:P19137 SMR:P19137 MINT:MINT-2635122
STRING:P19137 PhosphoSite:P19137 PaxDb:P19137 PRIDE:P19137
GeneID:16772 KEGG:mmu:16772 UCSC:uc008dkh.1 InParanoid:P19137
EvolutionaryTrace:P19137 NextBio:290602 CleanEx:MM_LAMA1
Genevestigator:P19137 GermOnline:ENSMUSG00000032796 Uniprot:P19137
Length = 3084
Score = 220 (82.5 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 51/145 (35%), Positives = 69/145 (47%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
++ S C +C GY P C +CS N C G C +C W
Sbjct: 830 YSGSWC-ERCADGYYGNPTVPGGTC----VPCNCSGNVDPLEAGHCDSVTGECLKCL-WN 883
Query: 89 T-GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
T G HC+ C G YG+A T + CR CDC+ +G S+ GVC TG C C+ + G+ C++C
Sbjct: 884 TDGAHCERCADGFYGDAVTAKNCRACDCHENG-SLSGVCHLETGLCDCKPHVTGQQCDQC 942
Query: 148 LPGYYGDPTDGGTCYYQCMARGMLT 172
L GYYG T G C G ++
Sbjct: 943 LSGYYGLDTGLGCVPCNCSVEGSVS 967
Score = 200 (75.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 56/150 (37%), Positives = 69/150 (46%)
Query: 42 YCKGPPDY---SCQ-CELGWTGVD-------CSVNCLCNNH-STC-VHGIGICDECHDWT 88
+C+ P Y SC+ C G+ VD C C C+ H S C +HGI C C T
Sbjct: 715 HCECPQGYTGTSCEACLPGYYRVDGILFGGICQP-CECHGHASECDIHGI--CSVCTHNT 771
Query: 89 TGDHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSITGECI----CQDNTQ 140
TGDHC+ C G YG + T C+ C C + N+ C GE + C
Sbjct: 772 TGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSIDSNNFSPTCHLTDGEEVVCDQCAPGYS 831
Query: 141 GKNCERCLPGYYGDPT-DGGTCYYQCMARG 169
G CERC GYYG+PT GGTC C G
Sbjct: 832 GSWCERCADGYYGNPTVPGGTCV-PCNCSG 860
Score = 197 (74.4 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 44/115 (38%), Positives = 55/115 (47%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNS 121
V C CNNHS C G C C D T+GDHC+ C +G YG T G C C C H
Sbjct: 1408 VPCNCNNHSDVCDPETGKCLSCRDHTSGDHCELCASGYYGKVTGLPGDCTPCTCPHHPPF 1467
Query: 122 VLGVCDSITGE----C-ICQDNTQGKNCERCLPGYYGDP-TDGGTCYY-QCMARG 169
+ G+ C C +G+ CERC GY+G+P GG+C C +G
Sbjct: 1468 SFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQG 1522
Score = 183 (69.5 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 46/133 (34%), Positives = 66/133 (49%)
Query: 51 CQ-CELGW----TGV--DCSVNCLCNNHS------TCV-HGIGI--CDECHDWTTGDHCQ 94
C+ C G+ TG+ DC+ C C +H TCV G C+ C G +C+
Sbjct: 1438 CELCASGYYGKVTGLPGDCTP-CTCPHHPPFSFSPTCVVEGDSDFRCNACLPGYEGQYCE 1496
Query: 95 YCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C AG +GN G C+ CDCN G SV CD +G+C+C+ G +CE+CLP +
Sbjct: 1497 RCSAGYHGNPRAAGGSCQTCDCNPQG-SVHSDCDRASGQCVCKPGATGLHCEKCLPRHIL 1555
Query: 154 DPTDGGTCYYQCM 166
+D +C C+
Sbjct: 1556 MESDCVSCDDDCV 1568
Score = 171 (65.3 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 49/142 (34%), Positives = 60/142 (42%)
Query: 41 GYCKGPPDYS---C-QCELGWTGVDCSVNCL-CNNH------STCVHGIGICDECHDWTT 89
G C P + C QC G+ G+D + C+ CN C G C C +
Sbjct: 926 GLCDCKPHVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSDNCTEE-GQC-HCGPGVS 983
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
G C C G Y A GC CDC N+ CD +GEC+C +TQG CE C
Sbjct: 984 GKQCDRCSHGFY--AFQDGGCTPCDCAHTQNN----CDPASGECLCPPHTQGLKCEECEE 1037
Query: 150 GYYG-DPTDG-GTCYYQCMARG 169
Y+G DP G C C A G
Sbjct: 1038 AYWGLDPEQGCQAC--NCSAVG 1057
Score = 149 (57.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 34/90 (37%), Positives = 43/90 (47%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG----------CRKCDCNSHGNSVLGVCDSITGEC 133
C T G CQ C G Y + G C C+CN+H + VCD TG+C
Sbjct: 1371 CPPGTAGHSCQDCAPGYYREKLPESGGRGPRPLLAPCVPCNCNNHSD----VCDPETGKC 1426
Query: 134 I-CQDNTQGKNCERCLPGYYGDPTD-GGTC 161
+ C+D+T G +CE C GYYG T G C
Sbjct: 1427 LSCRDHTSGDHCELCASGYYGKVTGLPGDC 1456
Score = 142 (55.0 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 44/148 (29%), Positives = 67/148 (45%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
++C +G+ Y+ Q + G T DC+ + + C G C C T G C+
Sbjct: 988 DRCSHGF------YAFQ-DGGCTPCDCA-----HTQNNCDPASGEC-LCPPHTQGLKCEE 1034
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C +G ++GC+ C+C++ G S CD ++G C C+ G++C +C GY P
Sbjct: 1035 CEEAYWG-LDPEQGCQACNCSAVG-STSAQCDVLSGHCPCKKGFGGQSCHQCSLGYRSFP 1092
Query: 156 TDGGTCYYQCMARGMLTGPGPQGLGSGL 183
D C C RG L P L GL
Sbjct: 1093 -DCVPC--GCDLRGTL--PDTCDLEQGL 1115
Score = 140 (54.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 39/127 (30%), Positives = 55/127 (43%)
Query: 30 NASLCYNKCIYGYCKGP-PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGI--GICDECH 85
N C ++ + P D+ C+ C G SV + H+ +G G C C
Sbjct: 379 NCETCIDQYYRPHKVSPYDDHPCRPCNCDPVGSLSSVCIKDDRHADLANGKWPGQCP-CR 437
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
GD C C+ G G C CDC + G+ L D C+C+ N +GKNC+
Sbjct: 438 KGYAGDKCDRCQFGYRGFPN----CIPCDCRTVGS--LNE-DPCIEPCLCKKNVEGKNCD 490
Query: 146 RCLPGYY 152
RC PG+Y
Sbjct: 491 RCKPGFY 497
Score = 100 (40.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 32/100 (32%), Positives = 41/100 (41%)
Query: 41 GYC---KGPPDYSC-QCELGWTGVDCSVNCLCN-----NHSTCVHGIGICDECHDWTTGD 91
G C KG C +C+ G+ G + C C N C+ C C G
Sbjct: 432 GQCPCRKGYAGDKCDRCQFGYRGFPNCIPCDCRTVGSLNEDPCIEP---C-LCKKNVEGK 487
Query: 92 HCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSIT 130
+C C+ G Y EGC +C C G V GVCDS+T
Sbjct: 488 NCDRCKPGFYNLKERNPEGCSECFC--FG--VSGVCDSLT 523
Score = 80 (33.2 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 133 CICQDNTQGKNCERCLPGYYGD--PTDGG 159
C+C T G +C+ C PGYY + P GG
Sbjct: 1369 CVCPPGTAGHSCQDCAPGYYREKLPESGG 1397
Score = 63 (27.2 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 289 SEGFNATYQIFSC-PDKCPENRT-C--INNQCVCPPRRTGPDCQE 329
S GF A +Q C P C + C + +C+CPP G C+E
Sbjct: 991 SHGFYA-FQDGGCTPCDCAHTQNNCDPASGECLCPPHTQGLKCEE 1034
Score = 53 (23.7 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 316 CVCPPRRTGPDCQE 329
CVCPP G CQ+
Sbjct: 1369 CVCPPGTAGHSCQD 1382
Score = 50 (22.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 313 NNQCVCPPRRTGPDCQE 329
+ QCVC P TG C++
Sbjct: 1532 SGQCVCKPGATGLHCEK 1548
Score = 46 (21.3 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 15/49 (30%), Positives = 19/49 (38%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGT--CD 346
S D C E QC C P +G C C + + F + G CD
Sbjct: 965 SVSDNCTEE-----GQCHCGPGVSGKQCDR--CSHGFYAFQDGGCTPCD 1006
Score = 42 (19.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 303 DKCPENRTCINNQCVCPPRRTGPDCQEEICP 333
D C + C+ P R T DCQ CP
Sbjct: 774 DHCEQ---CLPGFYGTPSRGTPGDCQPCACP 801
Score = 39 (18.8 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 302 PDKCP-ENRTCINNQ----CVCPPRRTGPDCQE 329
PD C E C ++ C C GP C +
Sbjct: 1106 PDTCDLEQGLCSCSEDSGTCSCKENVVGPQCSK 1138
Score = 39 (18.8 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 6/14 (42%), Positives = 7/14 (50%)
Query: 316 CVCPPRRTGPDCQE 329
C C P TG C +
Sbjct: 928 CDCKPHVTGQQCDQ 941
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 316 CVCPPRRTGPDCQ 328
C CP TG C+
Sbjct: 716 CECPQGYTGTSCE 728
>UNIPROTKB|E9PTR0 [details] [associations]
symbol:E9PTR0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005606
IPI:IPI00568879 Ensembl:ENSRNOT00000052028 ArrayExpress:E9PTR0
Uniprot:E9PTR0
Length = 1622
Score = 232 (86.7 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 54/142 (38%), Positives = 69/142 (48%)
Query: 64 VNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV 122
V C CN HS C G G+C C T G+HC+ C+ G YG+A CR C C H NS
Sbjct: 62 VPCNCNGHSNRCQDGSGVCINCQHNTAGEHCERCQEGYYGSAI-HGSCRVCPC-PHTNSF 119
Query: 123 LGVC--DSITGECICQDNTQGKNCERCLPGYYGDPTD-GGTCY-YQCMARGMLTGPGPQG 178
C D C C+ G CERC PGY+G+P GG+C C + G P
Sbjct: 120 ATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKFGGSCQPCNCNSNGQFGTCDPL- 178
Query: 179 LGSGLAERNAWEGKD-TPSREC 199
G +++ E KD +P+ EC
Sbjct: 179 TGDCVSQ----EPKDGSPAEEC 196
Score = 138 (53.6 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 31/71 (43%), Positives = 38/71 (53%)
Query: 94 QYCRAGSYGNATT-QEG-CRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPG 150
Q CR G Y + + G C C+CN H N C +G CI CQ NT G++CERC G
Sbjct: 43 QGCRPGYYRDIKSFPAGRCVPCNCNGHSNR----CQDGSGVCINCQHNTAGEHCERCQEG 98
Query: 151 YYGDPTDGGTC 161
YYG G +C
Sbjct: 99 YYGSAIHG-SC 108
Score = 42 (19.8 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 315 QCVCPPRRTGPDCQ 328
+C C P TG C+
Sbjct: 131 RCACKPGYTGAQCE 144
Score = 41 (19.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 206 SLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGG 250
SLD +T+P ++ D + A+Y+ DG F GG
Sbjct: 1391 SLDIQTTSPKGLVFYTGTKDSFL-----ALYVADGRVVFALGAGG 1430
>UNIPROTKB|F1N8P9 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00823129
Ensembl:ENSGALT00000023564 ArrayExpress:F1N8P9 Uniprot:F1N8P9
Length = 3060
Score = 211 (79.3 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 50/147 (34%), Positives = 70/147 (47%)
Query: 29 FNASLCYNKCIYGYCKGP--PDYSC-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECH 85
+ S C +C GY P P SC CE C+ N C G C +C
Sbjct: 804 YTGSRC-ERCANGYYGNPLVPGQSCVPCE-------CNGNVNPQEDGYCDTITGQCLKCV 855
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
T G HC+ C G YG+A T++ CR C+C+ +G S+ VC TG C C+ + G+ C+
Sbjct: 856 GNTAGLHCEKCADGYYGDAVTEKSCRACECHVNG-SLSSVCHHETGICDCKSDVIGQKCD 914
Query: 146 RCLPGYYGDPTDGGTCYYQCMARGMLT 172
+CL G+YG T G C G ++
Sbjct: 915 KCLNGFYGLLTGLGCIPCNCSQFGSIS 941
Score = 196 (74.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 54/146 (36%), Positives = 66/146 (45%)
Query: 34 CYNKCIYGYCKGPP-DYSCQCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDWTTGD 91
C N C GY + P ++S + E C V C CNNHS TC G C C D T GD
Sbjct: 1354 CQN-CAPGYYREKPKEFSVR-ETHTIIAPC-VPCQCNNHSETCDPETGKCLNCRDNTVGD 1410
Query: 92 HCQYCRAGSYGNAT-TQEGCRKCDC---NSHGNSVLGVCDSITG-EC-ICQDNTQGKNCE 145
+C C G YG + C C C N S V + C C +G+ CE
Sbjct: 1411 YCSACAPGYYGKVIGSVNDCSLCACPRANPVSFSPTCVLKGVQDYHCDACLPGYEGQYCE 1470
Query: 146 RCLPGYYGDPT-DGGTCYY-QCMARG 169
+C GYYGDP GG+C+ QC G
Sbjct: 1471 KCSLGYYGDPQLPGGSCHLCQCNPSG 1496
Score = 190 (71.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 51/147 (34%), Positives = 63/147 (42%)
Query: 42 YCKGPPDY---SCQ-CELGWTGVD-------CSVNCLCNNHSTCVHGIGICDECHDWTTG 90
+C+ P Y SC+ C G+ VD C C CN H+T G+C C TTG
Sbjct: 689 FCECPQGYTGISCESCLPGYYRVDGILFGGICQP-CKCNGHATECDTQGVCFACQHNTTG 747
Query: 91 DHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSITGECI----CQDNTQGK 142
C C G YG+ + T E C+ C C +S N+ C GE I C G
Sbjct: 748 PFCDQCLPGFYGSPSQGTPEDCQPCACPLSSAANNFSPTCQLSEGEGIVCDKCLPGYTGS 807
Query: 143 NCERCLPGYYGDPTDGGTCYYQCMARG 169
CERC GYYG+P G C G
Sbjct: 808 RCERCANGYYGNPLVPGQSCVPCECNG 834
Score = 163 (62.4 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 55/169 (32%), Positives = 70/169 (41%)
Query: 31 ASLCYNKCIYGYC-KGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
A L KC GY + SC+ CE C VN + S C H GICD C
Sbjct: 859 AGLHCEKCADGYYGDAVTEKSCRACE-------CHVNGSLS--SVCHHETGICD-CKSDV 908
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL 148
G C C G YG T GC C+C+ G S+ C+ G+C C G+ C+RC
Sbjct: 909 IGQKCDKCLNGFYG-LLTGLGCIPCNCSQFG-SISEDCNH-QGQCHCLPGVAGEKCDRCA 965
Query: 149 PGYYGDPTDGGT---CYY---QCMA-RGM-LTGPGPQGLGSGLAERNAW 189
G++ G T C + C A G + P +G L E N W
Sbjct: 966 HGFHSLQKSGCTPCDCAHTQNNCNADSGQCICPPHTRGPKCDLCEENHW 1014
Score = 162 (62.1 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 45/127 (35%), Positives = 58/127 (45%)
Query: 34 CYNKCIYGYCKG-PPDYSCQCELGWTGVDCSVNCLC---NNHS---TCV-HGIGI--CDE 83
C + + YC P Y + +G DCS+ C C N S TCV G+ CD
Sbjct: 1403 CRDNTVGDYCSACAPGYYGKV-IGSVN-DCSL-CACPRANPVSFSPTCVLKGVQDYHCDA 1459
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C G +C+ C G YG+ G C C CN G SV CD +TG+C C+ G+
Sbjct: 1460 CLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCQCNPSG-SVHVNCDRVTGKCPCKQGVTGQ 1518
Query: 143 NCERCLP 149
CE C P
Sbjct: 1519 LCEECEP 1525
Score = 151 (58.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
++C +G+ +S Q + G T DC+ + + C G C C T G C
Sbjct: 962 DRCAHGF------HSLQ-KSGCTPCDCA-----HTQNNCNADSGQCI-CPPHTRGPKCDL 1008
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C +G + + GC+ C+C+ G+ L CD +TG+C C+ G+NC RC GY P
Sbjct: 1009 CEENHWG-LSPKLGCKACNCSDSGSDSLQ-CDVLTGQCQCKAEFGGQNCSRCALGYRDYP 1066
Score = 150 (57.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 33/84 (39%), Positives = 41/84 (48%)
Query: 78 IGICDECHDWTTGDHCQYCRAGSYGNATTQEG--CRKCDCNSHGNSVLGVCDSITGECI- 134
+ C EC TG C+ C G Y G C+ C CN H CD+ G C
Sbjct: 687 VEFC-ECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCNGHATE----CDT-QGVCFA 740
Query: 135 CQDNTQGKNCERCLPGYYGDPTDG 158
CQ NT G C++CLPG+YG P+ G
Sbjct: 741 CQHNTTGPFCDQCLPGFYGSPSQG 764
Score = 140 (54.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 35/108 (32%), Positives = 49/108 (45%)
Query: 47 PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYGNA 104
P Y C C+ G SV S HG G C +C D TG+ C C G G
Sbjct: 374 PCYPCGCDP--FGSLSSVCVKDERQSDSQHGTWPGQC-QCRDGYTGEKCDRCAFGYRG-- 428
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C +C+C+ G+ C C+C++N +G+NC+ C PG+Y
Sbjct: 429 --YPNCLRCNCSLIGSINEDPCAE---PCLCKENVEGENCDLCKPGFY 471
Score = 118 (46.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 33/102 (32%), Positives = 44/102 (43%)
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG----NATTQEGCRKCDCNSHGNSVLG 124
N H G G+C C TTG +C+ C G + + C C C+ G S+
Sbjct: 331 NIHGQYTGG-GVCLNCSQHTTGINCEMCADGYFRPQKVSPYDDHPCYPCGCDPFG-SLSS 388
Query: 125 VC-------DSI----TGECICQDNTQGKNCERCLPGYYGDP 155
VC DS G+C C+D G+ C+RC GY G P
Sbjct: 389 VCVKDERQSDSQHGTWPGQCQCRDGYTGEKCDRCAFGYRGYP 430
Score = 70 (29.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 289 SEGFNATYQIFSCPDKCPENRTCIN---NQCVCPPRRTGPDCQEEICPNECH 337
+ GF++ + P C + N QC+CPP GP C ++C E H
Sbjct: 965 AHGFHSLQKSGCTPCDCAHTQNNCNADSGQCICPPHTRGPKC--DLC-EENH 1013
Score = 43 (20.2 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 18/58 (31%), Positives = 23/58 (39%)
Query: 286 GKPSEGFNATYQIFSCPDKCPENR---TCINNQ-----C-VCPPRRTGPDCQEEICPN 334
G PS+G Q +CP N TC ++ C C P TG C+ C N
Sbjct: 759 GSPSQGTPEDCQPCACPLSSAANNFSPTCQLSEGEGIVCDKCLPGYTGSRCER--CAN 814
Score = 40 (19.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 308 NRTCINNQCVCPPRRTGPDCQ 328
+R + QC CP G CQ
Sbjct: 1335 SRAHLIEQCRCPAGYAGFSCQ 1355
Score = 40 (19.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 312 INNQCVCPPRRTGPDCQEEICPNECHEFLNHG--TCDLLLTGV 352
+ +C C TG C+E C H L +CD TGV
Sbjct: 1505 VTGKCPCKQGVTGQLCEE--CEPR-HLLLEEECVSCDDNCTGV 1544
Score = 40 (19.1 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 317 VCPPRRTGP-DCQEEICPNECHEFLNHGTCDLLLTGV 352
VC TG DC+ ++ +C + LN G LL TG+
Sbjct: 894 VCH-HETGICDCKSDVIGQKCDKCLN-GFYGLL-TGL 927
Score = 38 (18.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 305 CPENRTC-INNQCV-----CPPRRTGPDCQEEICP 333
C N T +QC+ P + T DCQ CP
Sbjct: 741 CQHNTTGPFCDQCLPGFYGSPSQGTPEDCQPCACP 775
Score = 37 (18.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 316 CVCPPRRTGPDCQ 328
C CP TG C+
Sbjct: 690 CECPQGYTGISCE 702
>UNIPROTKB|F1NM47 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005608 "laminin-3 complex" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
OMA:EPFYWRL GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00587004
Ensembl:ENSGALT00000036890 ArrayExpress:F1NM47 Uniprot:F1NM47
Length = 3061
Score = 211 (79.3 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 50/147 (34%), Positives = 70/147 (47%)
Query: 29 FNASLCYNKCIYGYCKGP--PDYSC-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECH 85
+ S C +C GY P P SC CE C+ N C G C +C
Sbjct: 804 YTGSRC-ERCANGYYGNPLVPGQSCVPCE-------CNGNVNPQEDGYCDTITGQCLKCV 855
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
T G HC+ C G YG+A T++ CR C+C+ +G S+ VC TG C C+ + G+ C+
Sbjct: 856 GNTAGLHCEKCADGYYGDAVTEKSCRACECHVNG-SLSSVCHHETGICDCKSDVIGQKCD 914
Query: 146 RCLPGYYGDPTDGGTCYYQCMARGMLT 172
+CL G+YG T G C G ++
Sbjct: 915 KCLNGFYGLLTGLGCIPCNCSQFGSIS 941
Score = 196 (74.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 54/146 (36%), Positives = 66/146 (45%)
Query: 34 CYNKCIYGYCKGPP-DYSCQCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDWTTGD 91
C N C GY + P ++S + E C V C CNNHS TC G C C D T GD
Sbjct: 1354 CQN-CAPGYYREKPKEFSVR-ETHTIIAPC-VPCQCNNHSETCDPETGKCLNCRDNTVGD 1410
Query: 92 HCQYCRAGSYGNAT-TQEGCRKCDC---NSHGNSVLGVCDSITG-EC-ICQDNTQGKNCE 145
+C C G YG + C C C N S V + C C +G+ CE
Sbjct: 1411 YCSACAPGYYGKVIGSVNDCSLCACPRANPVSFSPTCVLKGVQDYHCDACLPGYEGQYCE 1470
Query: 146 RCLPGYYGDPT-DGGTCYY-QCMARG 169
+C GYYGDP GG+C+ QC G
Sbjct: 1471 KCSLGYYGDPQLPGGSCHLCQCNPSG 1496
Score = 190 (71.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 51/147 (34%), Positives = 63/147 (42%)
Query: 42 YCKGPPDY---SCQ-CELGWTGVD-------CSVNCLCNNHSTCVHGIGICDECHDWTTG 90
+C+ P Y SC+ C G+ VD C C CN H+T G+C C TTG
Sbjct: 689 FCECPQGYTGISCESCLPGYYRVDGILFGGICQP-CKCNGHATECDTQGVCFACQHNTTG 747
Query: 91 DHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSITGECI----CQDNTQGK 142
C C G YG+ + T E C+ C C +S N+ C GE I C G
Sbjct: 748 PFCDQCLPGFYGSPSQGTPEDCQPCACPLSSAANNFSPTCQLSEGEGIVCDKCLPGYTGS 807
Query: 143 NCERCLPGYYGDPTDGGTCYYQCMARG 169
CERC GYYG+P G C G
Sbjct: 808 RCERCANGYYGNPLVPGQSCVPCECNG 834
Score = 163 (62.4 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 55/169 (32%), Positives = 70/169 (41%)
Query: 31 ASLCYNKCIYGYC-KGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
A L KC GY + SC+ CE C VN + S C H GICD C
Sbjct: 859 AGLHCEKCADGYYGDAVTEKSCRACE-------CHVNGSLS--SVCHHETGICD-CKSDV 908
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL 148
G C C G YG T GC C+C+ G S+ C+ G+C C G+ C+RC
Sbjct: 909 IGQKCDKCLNGFYG-LLTGLGCIPCNCSQFG-SISEDCNH-QGQCHCLPGVAGEKCDRCA 965
Query: 149 PGYYGDPTDGGT---CYY---QCMA-RGM-LTGPGPQGLGSGLAERNAW 189
G++ G T C + C A G + P +G L E N W
Sbjct: 966 HGFHSLQKSGCTPCDCAHTQNNCNADSGQCICPPHTRGPKCDLCEENHW 1014
Score = 162 (62.1 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 45/127 (35%), Positives = 58/127 (45%)
Query: 34 CYNKCIYGYCKG-PPDYSCQCELGWTGVDCSVNCLC---NNHS---TCV-HGIGI--CDE 83
C + + YC P Y + +G DCS+ C C N S TCV G+ CD
Sbjct: 1403 CRDNTVGDYCSACAPGYYGKV-IGSVN-DCSL-CACPRANPVSFSPTCVLKGVQDYHCDA 1459
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C G +C+ C G YG+ G C C CN G SV CD +TG+C C+ G+
Sbjct: 1460 CLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCQCNPSG-SVHVNCDRVTGKCPCKQGVTGQ 1518
Query: 143 NCERCLP 149
CE C P
Sbjct: 1519 LCEECEP 1525
Score = 151 (58.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
++C +G+ +S Q + G T DC+ + + C G C C T G C
Sbjct: 962 DRCAHGF------HSLQ-KSGCTPCDCA-----HTQNNCNADSGQCI-CPPHTRGPKCDL 1008
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C +G + + GC+ C+C+ G+ L CD +TG+C C+ G+NC RC GY P
Sbjct: 1009 CEENHWG-LSPKLGCKACNCSDSGSDSLQ-CDVLTGQCQCKAEFGGQNCSRCALGYRDYP 1066
Score = 150 (57.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 33/84 (39%), Positives = 41/84 (48%)
Query: 78 IGICDECHDWTTGDHCQYCRAGSYGNATTQEG--CRKCDCNSHGNSVLGVCDSITGECI- 134
+ C EC TG C+ C G Y G C+ C CN H CD+ G C
Sbjct: 687 VEFC-ECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCNGHATE----CDT-QGVCFA 740
Query: 135 CQDNTQGKNCERCLPGYYGDPTDG 158
CQ NT G C++CLPG+YG P+ G
Sbjct: 741 CQHNTTGPFCDQCLPGFYGSPSQG 764
Score = 140 (54.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 35/108 (32%), Positives = 49/108 (45%)
Query: 47 PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYGNA 104
P Y C C+ G SV S HG G C +C D TG+ C C G G
Sbjct: 374 PCYPCGCDP--FGSLSSVCVKDERQSDSQHGTWPGQC-QCRDGYTGEKCDRCAFGYRG-- 428
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C +C+C+ G+ C C+C++N +G+NC+ C PG+Y
Sbjct: 429 --YPNCLRCNCSLIGSINEDPCAE---PCLCKENVEGENCDLCKPGFY 471
Score = 118 (46.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 33/102 (32%), Positives = 44/102 (43%)
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG----NATTQEGCRKCDCNSHGNSVLG 124
N H G G+C C TTG +C+ C G + + C C C+ G S+
Sbjct: 331 NIHGQYTGG-GVCLNCSQHTTGINCEMCADGYFRPQKVSPYDDHPCYPCGCDPFG-SLSS 388
Query: 125 VC-------DSI----TGECICQDNTQGKNCERCLPGYYGDP 155
VC DS G+C C+D G+ C+RC GY G P
Sbjct: 389 VCVKDERQSDSQHGTWPGQCQCRDGYTGEKCDRCAFGYRGYP 430
Score = 70 (29.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 289 SEGFNATYQIFSCPDKCPENRTCIN---NQCVCPPRRTGPDCQEEICPNECH 337
+ GF++ + P C + N QC+CPP GP C ++C E H
Sbjct: 965 AHGFHSLQKSGCTPCDCAHTQNNCNADSGQCICPPHTRGPKC--DLC-EENH 1013
Score = 43 (20.2 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 18/58 (31%), Positives = 23/58 (39%)
Query: 286 GKPSEGFNATYQIFSCPDKCPENR---TCINNQ-----C-VCPPRRTGPDCQEEICPN 334
G PS+G Q +CP N TC ++ C C P TG C+ C N
Sbjct: 759 GSPSQGTPEDCQPCACPLSSAANNFSPTCQLSEGEGIVCDKCLPGYTGSRCER--CAN 814
Score = 40 (19.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 308 NRTCINNQCVCPPRRTGPDCQ 328
+R + QC CP G CQ
Sbjct: 1335 SRAHLIEQCRCPAGYAGFSCQ 1355
Score = 40 (19.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 312 INNQCVCPPRRTGPDCQEEICPNECHEFLNHG--TCDLLLTGV 352
+ +C C TG C+E C H L +CD TGV
Sbjct: 1505 VTGKCPCKQGVTGQLCEE--CEPR-HLLLEEECVSCDDNCTGV 1544
Score = 40 (19.1 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 317 VCPPRRTGP-DCQEEICPNECHEFLNHGTCDLLLTGV 352
VC TG DC+ ++ +C + LN G LL TG+
Sbjct: 894 VCH-HETGICDCKSDVIGQKCDKCLN-GFYGLL-TGL 927
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 305 CPENRTC-INNQCV-----CPPRRTGPDCQEEICP 333
C N T +QC+ P + T DCQ CP
Sbjct: 741 CQHNTTGPFCDQCLPGFYGSPSQGTPEDCQPCACP 775
Score = 37 (18.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 316 CVCPPRRTGPDCQ 328
C CP TG C+
Sbjct: 690 CECPQGYTGISCE 702
>WB|WBGene00006787 [details] [associations]
symbol:unc-52 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IGI;IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0061199 "striated muscle contraction involved in
embryonic body morphogenesis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IGI] [GO:0016477 "cell
migration" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0040017
"positive regulation of locomotion" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 216 (81.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 57/143 (39%), Positives = 70/143 (48%)
Query: 43 CKGPPDY---SCQ-CELGW--TG----VDCSVNCLCNNH-STCVHGIGICDECHDWTTGD 91
C PP Y SC+ C G+ TG + C CN H S C G C +C T GD
Sbjct: 922 CICPPGYVGTSCEDCAPGYSRTGGGLYLGLCEKCECNGHASQCDKEYGYCLDCQHNTEGD 981
Query: 92 HCQYCRAGSYGNAT--TQEGCRK------CDCNSHGNSVLGVCDSITGECI-CQDNTQGK 142
C+ C+ G G+A T C+ C CN+H S G CDS G C+ C+ NT+G
Sbjct: 982 QCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNH--SPRG-CDSF-GRCLLCEHNTEGT 1037
Query: 143 NCERCLPGYYGDPTDGGTCYYQC 165
+CERC GYYGD T G Y C
Sbjct: 1038 HCERCKKGYYGDATKGSP--YDC 1058
Score = 146 (56.5 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 34/91 (37%), Positives = 41/91 (45%)
Query: 66 CLCNNHST--CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNS 121
C CNNHS C G C C T G HC+ C+ G YG+AT + C C C +
Sbjct: 1011 CHCNNHSPRGC-DSFGRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGASDC 1069
Query: 122 VLGVCDSITGEC-ICQDNTQGKNCERCLPGY 151
L + C IC QG+ C C PGY
Sbjct: 1070 YLDNEGQVA--CRICPAGLQGRLCNECAPGY 1098
Score = 81 (33.6 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDC 115
G C EC TG +C C+ G++ + + EGC KC C
Sbjct: 398 GTC-ECKSQVTGPNCDQCKPGAFHLSEKSPEGCLKCFC 434
Score = 78 (32.5 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 131 GECICQDNTQGKNCERCLPGYYG-DPTDGGTCYYQCMARGM 170
G+C C+ + G NC+RC P +G PT+ C C G+
Sbjct: 687 GQCQCKASVIGPNCDRCAPNSFGLAPTNPQGCI-PCFCSGV 726
Score = 65 (27.9 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 300 SCPDKCPENRTCINN----QCVCPPRRTGPDCQEE 330
SC D+ C++N QCVCP TG C+E+
Sbjct: 2753 SCHDESCNTGICLDNEESWQCVCPLGTTGLRCEEK 2787
Score = 38 (18.4 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 46 PPDY-SCQCELGWTGVDC 62
P +Y +C+C+ TG +C
Sbjct: 394 PNNYGTCECKSQVTGPNC 411
Score = 37 (18.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 240 GLPDFVTSVGGTHQSTTLGVFCTEDM 265
G+PD + GG + +G C D+
Sbjct: 3314 GVPDISKATGGLFSNNFVG--CIADV 3337
>UNIPROTKB|Q06561 [details] [associations]
symbol:unc-52 "Basement membrane proteoglycan" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030239 "myofibril assembly" evidence=IEP]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 216 (81.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 57/143 (39%), Positives = 70/143 (48%)
Query: 43 CKGPPDY---SCQ-CELGW--TG----VDCSVNCLCNNH-STCVHGIGICDECHDWTTGD 91
C PP Y SC+ C G+ TG + C CN H S C G C +C T GD
Sbjct: 922 CICPPGYVGTSCEDCAPGYSRTGGGLYLGLCEKCECNGHASQCDKEYGYCLDCQHNTEGD 981
Query: 92 HCQYCRAGSYGNAT--TQEGCRK------CDCNSHGNSVLGVCDSITGECI-CQDNTQGK 142
C+ C+ G G+A T C+ C CN+H S G CDS G C+ C+ NT+G
Sbjct: 982 QCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNH--SPRG-CDSF-GRCLLCEHNTEGT 1037
Query: 143 NCERCLPGYYGDPTDGGTCYYQC 165
+CERC GYYGD T G Y C
Sbjct: 1038 HCERCKKGYYGDATKGSP--YDC 1058
Score = 146 (56.5 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 34/91 (37%), Positives = 41/91 (45%)
Query: 66 CLCNNHST--CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNS 121
C CNNHS C G C C T G HC+ C+ G YG+AT + C C C +
Sbjct: 1011 CHCNNHSPRGC-DSFGRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGASDC 1069
Query: 122 VLGVCDSITGEC-ICQDNTQGKNCERCLPGY 151
L + C IC QG+ C C PGY
Sbjct: 1070 YLDNEGQVA--CRICPAGLQGRLCNECAPGY 1098
Score = 81 (33.6 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDC 115
G C EC TG +C C+ G++ + + EGC KC C
Sbjct: 398 GTC-ECKSQVTGPNCDQCKPGAFHLSEKSPEGCLKCFC 434
Score = 78 (32.5 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 131 GECICQDNTQGKNCERCLPGYYG-DPTDGGTCYYQCMARGM 170
G+C C+ + G NC+RC P +G PT+ C C G+
Sbjct: 687 GQCQCKASVIGPNCDRCAPNSFGLAPTNPQGCI-PCFCSGV 726
Score = 65 (27.9 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 300 SCPDKCPENRTCINN----QCVCPPRRTGPDCQEE 330
SC D+ C++N QCVCP TG C+E+
Sbjct: 2753 SCHDESCNTGICLDNEESWQCVCPLGTTGLRCEEK 2787
Score = 38 (18.4 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 46 PPDY-SCQCELGWTGVDC 62
P +Y +C+C+ TG +C
Sbjct: 394 PNNYGTCECKSQVTGPNC 411
Score = 37 (18.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 240 GLPDFVTSVGGTHQSTTLGVFCTEDM 265
G+PD + GG + +G C D+
Sbjct: 3314 GVPDISKATGGLFSNNFVG--CIADV 3337
>UNIPROTKB|E5RFQ2 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] GO:GO:0050873 GO:GO:0005605
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0001568 EMBL:Z99289 EMBL:AL590106
HGNC:HGNC:6484 ChiTaRS:LAMA4 IPI:IPI00983822
ProteinModelPortal:E5RFQ2 SMR:E5RFQ2 Ensembl:ENST00000521398
ArrayExpress:E5RFQ2 Bgee:E5RFQ2 Uniprot:E5RFQ2
Length = 331
Score = 213 (80.0 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 64/186 (34%), Positives = 82/186 (44%)
Query: 37 KCIYGYC----KGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGI--CDECHDWTT 89
KC+ GY +G P + CQ C C + L N +C G C C++
Sbjct: 112 KCLDGYIGDSIRGAPQF-CQPCP-------CPLPHLANFAESCYRKNGAVRCI-CNENYA 162
Query: 90 GDHCQYCRAGSYGNATT-QEGCRKCDC--NSHGNSVLGVCDSITGECI-CQDNTQGKNCE 145
G +C+ C G YGN C+KCDC NS N + CD +TG+C C NT G CE
Sbjct: 163 GPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCE 222
Query: 146 RCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAER-NAWEGKDTPS---RECLW 201
RC PGYYGD C C G GP G L E G D P+ +C+W
Sbjct: 223 RCAPGYYGDARIAKNCAV-CNCGG---GPCDSVTGECLEEGFEPPTGMDCPTISCDKCVW 278
Query: 202 IIGQSL 207
+ +L
Sbjct: 279 DLTDAL 284
Score = 206 (77.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 46/116 (39%), Positives = 59/116 (50%)
Query: 61 DCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCN- 116
+C V C CN +S C+ G G C C TTG+HC+ C G G++ + C+ C C
Sbjct: 78 EC-VPCDCNGNSNECLDGSGYCVHCQRNTTGEHCEKCLDGYIGDSIRGAPQFCQPCPCPL 136
Query: 117 SHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT-DGGTCYYQCMARG 169
H + C G CIC +N G NCERC PGYYG+P G TC +C G
Sbjct: 137 PHLANFAESCYRKNGAVRCICNENYAGPNCERCAPGYYGNPLLIGSTCK-KCDCSG 191
>RGD|1582797 [details] [associations]
symbol:Megf11 "multiple EGF-like-domains 11" species:10116
"Rattus norvegicus" [GO:0010842 "retina layer formation"
evidence=ISO] [GO:0034109 "homotypic cell-cell adhesion"
evidence=ISO] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 RGD:1582797 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS50027 Pfam:PF12661
GeneTree:ENSGT00690000101691 IPI:IPI00959176
Ensembl:ENSRNOT00000050649 Uniprot:F1M370
Length = 1094
Score = 195 (73.7 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 55/158 (34%), Positives = 73/158 (46%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGI--- 78
F LC +C++G C P +C CE GW G DCS C C+N C +G
Sbjct: 96 FCIPLCTEECMHGRCVSPD--TCHCEPGWGGPDCSSGCDSEHWGPHCSNRCQCQNGALCN 153
Query: 79 ---GICDECHDWTTGDHCQ-YCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGEC 133
G C C G C+ +C G++G +GC+ C C+ HG S CD TGEC
Sbjct: 154 PITGAC-VCAPGFRGWRCEEFCAPGTHG-----KGCQLLCQCH-HGAS----CDPRTGEC 202
Query: 134 ICQDNTQGKNCER-CLPGYYGD------PT-DGGTCYY 163
+C G CE C PG +G P +GGTC++
Sbjct: 203 LCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHH 240
Score = 170 (64.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 48/146 (32%), Positives = 63/146 (43%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGI----- 78
+S+C C G P D SC C GW G+DCS+ C CN C +G
Sbjct: 445 SSVC--SCSNGGTCSPVDGSCTCREGWQGLDCSLPCPSGTWGLNCNESCVCANGAACSPF 502
Query: 79 -GICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
G C W GD C+ C G++G ++ CDC SH + CD +TG C C
Sbjct: 503 DGSCACTPGWL-GDSCELPCPDGTFGLNCSEH----CDC-SHADG----CDPVTGHCCCL 552
Query: 137 DNTQGKNCER-CLPGYYGDPTDGGTC 161
G C+ C PG +G P +C
Sbjct: 553 AGWTGIRCDSTCPPGRWG-PNCSVSC 577
Score = 170 (64.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 46/132 (34%), Positives = 60/132 (45%)
Query: 31 ASLCYNKCIY-GYCKGPPDYSCQCELGWTGVDCSVNC-------------LCNNHSTCVH 76
A LC C G C P D SCQC GWTG DCS C C N ++C H
Sbjct: 662 AQLC--SCANNGTCS-PIDGSCQCFPGWTGKDCSQGCPAAFFGKDCGHICQCQNGASCDH 718
Query: 77 GIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECI 134
G C C +G HC Q C G++G GC++ C+C ++ CD +TG C
Sbjct: 719 ITGKCT-CRTGFSGRHCEQRCAPGTFGY-----GCQQLCECMNNAT-----CDHVTGTCY 767
Query: 135 CQDNTQGKNCER 146
C +G C++
Sbjct: 768 CSPGFKGIRCDQ 779
Score = 168 (64.2 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 46/135 (34%), Positives = 63/135 (46%)
Query: 26 LYIFNASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGI 80
L + + C++ + G C+ P +S C C G G DC+ C C N+ TC G
Sbjct: 622 LCVHSRGPCHH--VSGICECLPGFSGALCNQVCAGGHFGQDCAQLCSCANNGTCSPIDGS 679
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNT 139
C WT D Q C A +G + C C C + G S CD ITG+C C+
Sbjct: 680 CQCFPGWTGKDCSQGCPAAFFG-----KDCGHICQCQN-GAS----CDHITGKCTCRTGF 729
Query: 140 QGKNCE-RCLPGYYG 153
G++CE RC PG +G
Sbjct: 730 SGRHCEQRCAPGTFG 744
Score = 164 (62.8 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 47/135 (34%), Positives = 59/135 (43%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-Q 94
G C P Y+ C+ C G G C + C C N TC H G C C TG C Q
Sbjct: 200 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGEC-ACPPGWTGAVCAQ 258
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYG 153
C G++G +Q+ C C+ HG G CD +TG+C C G C E C G +G
Sbjct: 259 PCPPGTFGQNCSQD----CPCH-HG----GQCDHVTGQCHCTAGYMGDRCQEECPFGTFG 309
Query: 154 -------DPTDGGTC 161
D +GG C
Sbjct: 310 FRCSQRCDCHNGGQC 324
Score = 159 (61.0 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 43/125 (34%), Positives = 52/125 (41%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C Y CQ C G G CS C C+N C G C EC G C
Sbjct: 284 VTGQCHCTAGYMGDRCQEECPFGTFGFRCSQRCDCHNGGQCSPATGAC-ECEPGYKGPSC 342
Query: 94 Q--YCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLP 149
Q C G +G GC C C++ N++ C +TG C CQ G C E C
Sbjct: 343 QERLCPEGLHG-----PGCTSPCPCDTE-NTIS--CHPVTGACTCQPGWSGHYCNESCPA 394
Query: 150 GYYGD 154
GYYG+
Sbjct: 395 GYYGN 399
Score = 159 (61.0 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 56/165 (33%), Positives = 70/165 (42%)
Query: 37 KCIYGYCKGPPDYSCQ---CELGWTGVDCSVNCLCNNHSTC-VHGI-GICDECHDWTTGD 91
+C GY KGP SCQ C G G C+ C C+ +T H + G C C +G
Sbjct: 332 ECEPGY-KGP---SCQERLCPEGLHGPGCTSPCPCDTENTISCHPVTGACT-CQPGWSGH 386
Query: 92 HC-QYCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCL 148
+C + C AG YGN GC+ C C + + C SITG C C G+ C C
Sbjct: 387 YCNESCPAGYYGN-----GCQLPCTCQNGAD-----CHSITGSCTCAPGFMGEVCAVPCA 436
Query: 149 PGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKD 193
G YG P C C + G P GS R W+G D
Sbjct: 437 AGTYG-PNCSSVC--SC-SNGGTCSPVD---GSCTC-REGWQGLD 473
Score = 147 (56.8 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 48/145 (33%), Positives = 61/145 (42%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDH 92
+ G C P +S C C G+ G C + C C N + C H I G C C G+
Sbjct: 373 VTGACTCQPGWSGHYCNESCPAGYYGNGCQLPCTCQNGADC-HSITGSCT-CAPGFMGEV 430
Query: 93 CQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
C C AG+YG C C C S+G G C + G C C++ QG +C LP
Sbjct: 431 CAVPCAAGTYG-----PNCSSVCSC-SNG----GTCSPVDGSCTCREGWQGLDCS--LPC 478
Query: 151 YYGDPTDGGTCYYQCM-ARGMLTGP 174
G T G C C+ A G P
Sbjct: 479 PSG--TWGLNCNESCVCANGAACSP 501
Score = 138 (53.6 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 44/135 (32%), Positives = 61/135 (45%)
Query: 37 KCIYGYCKGPPDYSCQ--CELGWTGVDCSVNC-LC-NNHSTCVHGIGICDECHDWTTGDH 92
+C G+ +GP CQ C G+ G C+ C LC ++ C H GIC EC +G
Sbjct: 593 ECAPGF-RGP---LCQRICPPGFYGHGCAQPCPLCVHSRGPCHHVSGIC-ECLPGFSGAL 647
Query: 93 C-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPG 150
C Q C G +G Q+ + C C ++G C I G C C GK+C + C
Sbjct: 648 CNQVCAGGHFG----QDCAQLCSCANNGT-----CSPIDGSCQCFPGWTGKDCSQGCPAA 698
Query: 151 YYGDPTDGGTCYYQC 165
++G G C QC
Sbjct: 699 FFGKDC-GHIC--QC 710
Score = 136 (52.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 42/137 (30%), Positives = 53/137 (38%)
Query: 34 CYNKCIYGYCKG--PPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVHGI 78
C C + G P C C GWTG+ +CSV+C C N +C
Sbjct: 530 CSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTCPPGRWGPNCSVSCSCENGGSCSPVD 589
Query: 79 GICDECHDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C EC G CQ C G YG+ Q C C H G C ++G C C
Sbjct: 590 GSC-ECAPGFRGPLCQRICPPGFYGHGCAQP-CPLC---VHSR---GPCHHVSGICECLP 641
Query: 138 NTQGKNCER-CLPGYYG 153
G C + C G++G
Sbjct: 642 GFSGALCNQVCAGGHFG 658
Score = 130 (50.8 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 50/158 (31%), Positives = 66/158 (41%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC N I G C P + C+ C G G C + C C++ ++C G C C
Sbjct: 148 NGALC-NP-ITGACVCAPGFRGWRCEEFCAPGTHGKGCQLLCQCHHGASCDPRTGEC-LC 204
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
TG +C+ C GS+G C +C C + G G C ITGEC C G
Sbjct: 205 APGYTGVYCEELCPPGSHG-----AHCELRCPCQN-G----GTCHHITGECACPPGWTGA 254
Query: 143 NCER-CLPGYYGD------PTD-GGTCYY-----QCMA 167
C + C PG +G P GG C + C A
Sbjct: 255 VCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTA 292
Score = 118 (46.6 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 42/142 (29%), Positives = 55/142 (38%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N + C++ I G C P + C C G G +CS C C+N TC G C C
Sbjct: 409 NGADCHS--ITGSCTCAPGFMGEVCAVPCAAGTYGPNCSSVCSCSNGGTCSPVDGSCT-C 465
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
+ G C C +G++G E C C ++G C G C C G +
Sbjct: 466 REGWQGLDCSLPCPSGTWG-LNCNESC-VC---ANG----AACSPFDGSCACTPGWLGDS 516
Query: 144 CERCLPGYYGDPTDGGTCYYQC 165
CE P D T G C C
Sbjct: 517 CELPCP----DGTFGLNCSEHC 534
Score = 115 (45.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 55/198 (27%), Positives = 76/198 (38%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDHCQY-CRAGSYG-NATTQEG 109
C G+ G C + C C N + C H I G C C G+ C C AG+YG N ++
Sbjct: 392 CPAGYYGNGCQLPCTCQNGADC-HSITGSCT-CAPGFMGEVCAVPCAAGTYGPNCSSVCS 449
Query: 110 CRKCD-CNSHGNSVLGVC-DSITG-ECI--CQDNTQGKNCER---CLPGYYGDPTDGGTC 161
C C+ S C + G +C C T G NC C G P DG
Sbjct: 450 CSNGGTCSPVDGSC--TCREGWQGLDCSLPCPSGTWGLNCNESCVCANGAACSPFDGSCA 507
Query: 162 YYQCMARGMLTGPGPQG-LGSGLAER---NAWEGKDTPSRECLWIIGQS-LDSNSTAPAD 216
P P G G +E + +G D + C + G + + +ST P
Sbjct: 508 CTPGWLGDSCELPCPDGTFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTCPPG 567
Query: 217 IILLRLQPDINVPCN-EN 233
R P+ +V C+ EN
Sbjct: 568 ----RWGPNCSVSCSCEN 581
Score = 77 (32.2 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 299 FSCPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEICPNECH 337
F C +C C C C P GP CQE +CP H
Sbjct: 310 FRCSQRCDCHNGGQCSPATGACECEPGYKGPSCQERLCPEGLH 352
Score = 76 (31.8 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 23/67 (34%), Positives = 28/67 (41%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP-----NECHEFL--NHG-TCDLLLT 350
CP C TC I +C CPP TG C + CP C + +HG CD +
Sbjct: 230 CP--CQNGGTCHHITGECACPPGWTGAVCAQP-CPPGTFGQNCSQDCPCHHGGQCDHVTG 286
Query: 351 GVHITHG 357
H T G
Sbjct: 287 QCHCTAG 293
Score = 67 (28.6 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 21/57 (36%), Positives = 27/57 (47%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP-----NEC-H--EFLNHGTCDLLLTG 351
C N TC I+ C C P TG DC + CP +C H + N +CD + TG
Sbjct: 667 CANNGTCSPIDGSCQCFPGWTGKDCSQG-CPAAFFGKDCGHICQCQNGASCDHI-TG 721
Score = 65 (27.9 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 22/72 (30%), Positives = 28/72 (38%)
Query: 300 SCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHG 357
SC C +C ++ C C P GP CQ ICP F HG VH + G
Sbjct: 576 SC--SCENGGSCSPVDGSCECAPGFRGPLCQR-ICPPG---FYGHGCAQPCPLCVH-SRG 628
Query: 358 RTLHYQVDLIRC 369
H+ + C
Sbjct: 629 -PCHHVSGICEC 639
Score = 61 (26.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 17/51 (33%), Positives = 19/51 (37%)
Query: 300 SCPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+C CP C + QC C G CQEE CP F CD
Sbjct: 268 NCSQDCPCHHGGQCDHVTGQCHCTAGYMGDRCQEE-CPFGTFGFRCSQRCD 317
Score = 58 (25.5 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 20/73 (27%), Positives = 30/73 (41%)
Query: 286 GKP-SEGFNATYQIFSCPD--KCPENRTC--INNQCVCPPRRTGPDCQEEICPNE----C 336
GK S+G A + C +C +C I +C C +G C++ P C
Sbjct: 688 GKDCSQGCPAAFFGKDCGHICQCQNGASCDHITGKCTCRTGFSGRHCEQRCAPGTFGYGC 747
Query: 337 H---EFLNHGTCD 346
E +N+ TCD
Sbjct: 748 QQLCECMNNATCD 760
Score = 54 (24.1 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 301 CPDKCP---ENR-TC--INNQCVCPPRRTGPDCQEEICP 333
C CP EN +C + C C P +G C E CP
Sbjct: 356 CTSPCPCDTENTISCHPVTGACTCQPGWSGHYCNES-CP 393
Score = 54 (24.1 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C T I CPP R GP+C C C N G+C
Sbjct: 551 CLAGWTGIRCDSTCPPGRWGPNCSVS-C--SCE---NGGSC 585
Score = 45 (20.9 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
C C + C C P G C E CP+
Sbjct: 493 CANGAACSPFDGSCACTPGWLGDSC-ELPCPD 523
>FB|FBgn0039528 [details] [associations]
symbol:dsd "distracted" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008039 "synaptic
target recognition" evidence=IMP] InterPro:IPR000742
InterPro:IPR015915 PROSITE:PS50026 SMART:SM00181 EMBL:AE014297
GO:GO:0016021 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:MVVIFGH FlyBase:FBgn0039528
RefSeq:NP_651571.3 UniGene:Dm.7161 ProteinModelPortal:Q9VB20
SMR:Q9VB20 MINT:MINT-977402 STRING:Q9VB20
EnsemblMetazoa:FBtr0301390 GeneID:43315 KEGG:dme:Dmel_CG5634
UCSC:CG5634-RA CTD:43315 InParanoid:Q9VB20 PhylomeDB:Q9VB20
GenomeRNAi:43315 NextBio:833301 ArrayExpress:Q9VB20 Bgee:Q9VB20
Uniprot:Q9VB20
Length = 1323
Score = 225 (84.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 49/133 (36%), Positives = 67/133 (50%)
Query: 37 KCIYGYCKGPPDYSCQCELG-WTGVDCSVNCLCNNHSTCVHGIGICDE-CHDWTTGDHCQ 94
+C+ G P D +C L W C C CN HS C + C++ C++ TTG HC+
Sbjct: 921 RCVVGGALAPYD-DTECALKHWFFTSCP-RCNCNGHSYC-NDQQHCEQPCNNLTTGAHCE 977
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN-TQGKNCERC--LPGY 151
CR G +GN C++CDCN G C TG+C C G +CE+C Y
Sbjct: 978 KCRTGYWGNPINGGKCQRCDCNGQGV----YCHPDTGKCFCTTKGIVGDHCEKCDSQNHY 1033
Query: 152 YGDPTDGGTCYYQ 164
+GDP G +CYY+
Sbjct: 1034 HGDPLKG-SCYYE 1045
Score = 159 (61.0 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 63/231 (27%), Positives = 96/231 (41%)
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDT 194
CQ++ Q + +CL D G C + C + + P +G+ + W G +
Sbjct: 60 CQNDGQCQEDGQCL---CADGWQGPECQF-CGGKVRMYHP----MGT---IHDGW-GNYS 107
Query: 195 PSRECLWIIGQSLDS----NSTAPADIILLRLQ-PDINVPCNENAVYIYDGLPDFVTSVG 249
S +C W+I ++T P+ +R+ + C + +YIYDG D V
Sbjct: 108 VSVKCSWLIDARHPHWNRRHNTNPSRTANIRIHLREFATECGWDHLYIYDG--DSV---- 161
Query: 250 GTHQSTTLGVFCTEDMHRG-YEVLE-----AKSGVMTIHY--KQGKPSEGFNATYQIFSC 301
S L VF + M+RG + + A SG +H+ GFN TY++ SC
Sbjct: 162 ---DSPLLAVF-SGLMYRGNFSIRRVPQVIATSGTALVHFFSDDAYNMSGFNLTYKMNSC 217
Query: 302 PD-----KCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDL 347
P +C + C + C+C P G C CPN C E N G C L
Sbjct: 218 PSDSDEVECSGHGKCRDGDCICDPMYRGEACNIAACPNNCFESKNQGHCRL 268
>ZFIN|ZDB-GENE-060118-1 [details] [associations]
symbol:lama1 "laminin, alpha 1" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0048514 "blood vessel morphogenesis"
evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-060118-1 GO:GO:0001764 GO:GO:0030155 GO:GO:0048514
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043010 GO:GO:0030334
GO:GO:0008045 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031290 Pfam:PF02210
GO:GO:0045995 GO:GO:0030903 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0007634
CTD:284217 HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB
GO:GO:0005606 EMBL:DQ131910 IPI:IPI00492896 RefSeq:NP_001030158.1
UniGene:Dr.94156 ProteinModelPortal:Q45H72 SMR:Q45H72 STRING:Q45H72
GeneID:569971 KEGG:dre:569971 NextBio:20889926 Uniprot:Q45H72
Length = 3075
Score = 228 (85.3 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 52/147 (35%), Positives = 73/147 (49%)
Query: 29 FNASLCYNKCIYGYCKGP--PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECH 85
+ C +C GY P P C CE VD S C+ H+ G C +C
Sbjct: 826 YTGDKC-QRCADGYFGEPVVPGQRCSPCECNGN-VDPSEAGRCDTHT------GECLKCV 877
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
T G HC+ CR G YG+A ++ C+ C C S+G S+ +C+ ITG+C C+ N GK C+
Sbjct: 878 GHTAGPHCERCRDGYYGDAIQEKNCQACGCYSNG-SLSTICNLITGQCECKHNVVGKTCD 936
Query: 146 RCLPGYYGDPTDGGTCYYQCMARGMLT 172
RC GY+G + G +C G L+
Sbjct: 937 RCQEGYHGINSGEGCRPCECNQSGALS 963
Score = 185 (70.2 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 40/105 (38%), Positives = 53/105 (50%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDCNSHGNS 121
V C C+NHS +C G C C T G+HC C AG YG + C C C G S
Sbjct: 1405 VPCRCSNHSQSCDLHTGQCLGCQHNTAGEHCHVCAAGYYGKVQGSVSDCSLCACPLRGQS 1464
Query: 122 VLGVCD-SITGE--CI-CQDNTQGKNCERCLPGYYGDPTD-GGTC 161
C G+ C C++ +G+ CERC GY+G+P++ GG C
Sbjct: 1465 FSSTCVLEGAGDFRCDRCEEGYEGRYCERCAVGYFGNPSEPGGRC 1509
Score = 184 (69.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 51/146 (34%), Positives = 66/146 (45%)
Query: 42 YCKGPPDYS-CQCEL---GWT---GVDCSVNCL---CNNHSTCVHGIGICDECHDWTTGD 91
+C+ P YS CEL G+ G+ NCL CN+H+T G C C TTG
Sbjct: 711 HCECPWGYSGTSCELCIPGFYRVGGILFGGNCLPCECNDHATECDINGECLGCAHNTTGP 770
Query: 92 HCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCD-SITGECIC---QDNTQGKN 143
HC C G YG+A+ T + C++C C N+ C GE IC Q G
Sbjct: 771 HCDQCLPGFYGDASEGTPDDCQRCSCPLTLASNNFSPTCQLQAPGEFICDQCQSGYTGDK 830
Query: 144 CERCLPGYYGDPTDGGTCYYQCMARG 169
C+RC GY+G+P G C G
Sbjct: 831 CQRCADGYFGEPVVPGQRCSPCECNG 856
Score = 175 (66.7 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 44/129 (34%), Positives = 59/129 (45%)
Query: 50 SC-QCELGWTGVDCSVNCL-CN-NHSTCVHGIGICDE-----CHDWTTGDHCQYCRAGSY 101
+C +C+ G+ G++ C C N S + CDE C TGD C C G Y
Sbjct: 934 TCDRCQEGYHGINSGEGCRPCECNQSGALSAS--CDEEGRCQCITGVTGDKCDRCHHGYY 991
Query: 102 GNATTQEGCRKCDC-NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGT 160
+ GC CDC ++HGN C+ TGECIC +T G CE+C G++G G
Sbjct: 992 N--FKENGCTACDCAHTHGN-----CNGQTGECICPPHTHGLKCEQCDEGHWGHDGVSGC 1044
Query: 161 CYYQCMARG 169
C G
Sbjct: 1045 KVCNCSVVG 1053
Score = 167 (63.8 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 37/96 (38%), Positives = 51/96 (53%)
Query: 61 DCSVNCLC-----NNHSTCV-HGIGI--CDECHDWTTGDHCQYCRAGSYGNATTQEG-CR 111
DCS+ C C + STCV G G CD C + G +C+ C G +GN + G C+
Sbjct: 1452 DCSL-CACPLRGQSFSSTCVLEGAGDFRCDRCEEGYEGRYCERCAVGYFGNPSEPGGRCQ 1510
Query: 112 KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
C C+ G SV VCD+ TG C C+ +G C++C
Sbjct: 1511 VCACSESG-SVHSVCDAHTGRCECKPGVRGHLCDQC 1545
Score = 149 (57.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
++C +GY Y+ + E G T DC+ + H C G C C T G C+
Sbjct: 984 DRCHHGY------YNFK-ENGCTACDCA-----HTHGNCNGQTGECI-CPPHTHGLKCEQ 1030
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C G +G+ GC+ C+C+ G+S CD +G+C+C G C+RC GY P
Sbjct: 1031 CDEGHWGHDGVS-GCKVCNCSVVGSSS-SQCDLSSGQCVCALQFSGLTCDRCALGYRNFP 1088
Score = 139 (54.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 46/131 (35%), Positives = 58/131 (44%)
Query: 41 GYCKGPPD---YSC-QCELG-W--TGVD-CSV-NC--LCNNHSTCVHGIGICDECHDWTT 89
G C PP C QC+ G W GV C V NC + ++ S C G C C +
Sbjct: 1015 GECICPPHTHGLKCEQCDEGHWGHDGVSGCKVCNCSVVGSSSSQCDLSSGQC-VCALQFS 1073
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHG------NSVLGVCDSIT-GECICQDNTQGK 142
G C C G Y N C CDCN +G + LGVC G+C C+DN G+
Sbjct: 1074 GLTCDRCALG-YRNFPQ---CSACDCNPNGTRAQFCDEALGVCGCEDHGQCSCKDNVGGR 1129
Query: 143 NCERCLPGYYG 153
C+ C G +G
Sbjct: 1130 GCDECKSGSFG 1140
Score = 134 (52.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 33/88 (37%), Positives = 43/88 (48%)
Query: 78 IGICDECHDWTTGDHCQYCRAGSYGNATTQ---EG--------CRKCDCNSHGNSVLGVC 126
+ IC EC G CQ C G Y A ++ +G C C C++H S C
Sbjct: 1362 VEIC-ECPPGYAGLSCQECAPGYYRQAVSELNMKGRNRPLIQPCVPCRCSNHSQS----C 1416
Query: 127 DSITGECI-CQDNTQGKNCERCLPGYYG 153
D TG+C+ CQ NT G++C C GYYG
Sbjct: 1417 DLHTGQCLGCQHNTAGEHCHVCAAGYYG 1444
Score = 49 (22.3 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 315 QCVCPPRRTGPDCQE 329
+C+CPP G C++
Sbjct: 1016 ECICPPHTHGLKCEQ 1030
Score = 48 (22.0 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 316 CVCPPRRTGPDCQE 329
C CPP G CQE
Sbjct: 1365 CECPPGYAGLSCQE 1378
Score = 45 (20.9 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 303 DKCPENRTCINNQCV-CPPRRTG 324
D+C E ++ QCV C TG
Sbjct: 1543 DQCEERHVLVHEQCVSCNDSCTG 1565
Score = 39 (18.8 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 10/34 (29%), Positives = 13/34 (38%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+ QCVC + +G C C F CD
Sbjct: 1063 SGQCVCALQFSGLTCDR--CALGYRNFPQCSACD 1094
>UNIPROTKB|F1MXV1 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:DAAA02059311 EMBL:DAAA02059312
EMBL:DAAA02059313 EMBL:DAAA02059314 EMBL:DAAA02059315
EMBL:DAAA02059316 EMBL:DAAA02059317 EMBL:DAAA02059318
EMBL:DAAA02059319 EMBL:DAAA02059320 EMBL:DAAA02059321
IPI:IPI00699369 Ensembl:ENSBTAT00000023559 Uniprot:F1MXV1
Length = 1180
Score = 205 (77.2 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 38/109 (34%), Positives = 55/109 (50%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HSTC++ +C++C + TTG CQ C G YG+ T C C C+
Sbjct: 964 WSFIQCPA-CQCNGHSTCINN-NVCEQCKNLTTGKQCQDCMPGYYGDPTNGGQCTACTCS 1021
Query: 117 SHGNSVLGVCDSITGECICQDN-TQGKNCERCLPGYYGDPTDGG-TCYY 163
H N +C TG+C C +G C+ C ++ T+ TC Y
Sbjct: 1022 GHAN----ICHMHTGKCFCTTKGIKGDQCQFCKATHFYSGTNRKYTCTY 1066
Score = 140 (54.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 110 CRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMAR 168
C C CN H + VC+ C++ T GK C+ C+PGYYGDPT+GG C C
Sbjct: 969 CPACQCNGHSTCINNNVCEQ------CKNLTTGKQCQDCMPGYYGDPTNGGQCT-ACTCS 1021
Query: 169 G 169
G
Sbjct: 1022 G 1022
Score = 72 (30.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 23/80 (28%), Positives = 33/80 (41%)
Query: 25 LLYIFNASLCYNKCI-YGYCKGPPDYS----CQCELGWTGVDCSV-----NCLCNNHSTC 74
+ Y N+ C N C +G C S C+C+ W G C + NC +H C
Sbjct: 162 IFYSINS--CPNNCSGHGKCTTSVSVSNQVYCECDKYWKGEACDIPYCKANCGSPDHGYC 219
Query: 75 -VHGIGICDECHDWTTGDHC 93
+ G +C C+D G C
Sbjct: 220 DLTGEKLC-VCNDSWQGPDC 238
Score = 66 (28.3 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCSVN 65
+GYC + C C W G DCS+N
Sbjct: 216 HGYCDLTGEKLCVCNDSWQGPDCSLN 241
Score = 57 (25.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 23/65 (35%), Positives = 28/65 (43%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDH 92
LCY IY S CE TG S C+ +STC +CD W GD
Sbjct: 2 LCYG-LIYLALYAQVSQSKPCER--TGSCFSGRCV---NSTC-----LCDP--GWV-GDQ 47
Query: 93 CQYCR 97
CQ+C+
Sbjct: 48 CQHCQ 52
>RGD|1307207 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10116 "Rattus
norvegicus" [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO] [GO:0005606 "laminin-1 complex"
evidence=IEA;ISO] [GO:0005608 "laminin-3 complex" evidence=IEA;ISO]
[GO:0005615 "extracellular space" evidence=IEA;ISO] [GO:0005911
"cell-cell junction" evidence=IEA;ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009888 "tissue development" evidence=ISO] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IEA;ISO] [GO:0043208 "glycosphingolipid binding"
evidence=IEA;ISO] [GO:0043256 "laminin complex" evidence=ISO]
[GO:0045198 "establishment of epithelial cell apical/basal
polarity" evidence=IEA;ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA;ISO]
[GO:0060445 "branching involved in salivary gland morphogenesis"
evidence=IEA;ISO] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA;ISO] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 RGD:1307207 GO:GO:0005615 GO:GO:0030155
GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0031175 GO:GO:0060441 GO:GO:0060445 Pfam:PF02210
GO:GO:0045198 GO:GO:0045995 GO:GO:0005201 GO:GO:0043208
GO:GO:0002011 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
GO:GO:0005608 EMBL:AB425340 IPI:IPI00363534 RefSeq:NP_001101707.2
UniGene:Rn.2807 Ensembl:ENSRNOT00000023226 GeneID:316758
KEGG:rno:316758 UCSC:RGD:1307207 NextBio:671215 Uniprot:D4A409
Length = 3083
Score = 217 (81.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 49/145 (33%), Positives = 69/145 (47%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
++ + C +C GY P C +CS N C G C +C W
Sbjct: 830 YSGAWC-ERCADGYYGNPTVPGGTC----VPCNCSGNVDPLEAGHCDSVTGECLKCL-WN 883
Query: 89 T-GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
T G HC+ C G YG+A T + CR C+C+ +G S+ G+C TG C C+ G+ C++C
Sbjct: 884 TDGAHCERCADGFYGDAVTAKNCRACNCHENG-SLSGICHLETGLCDCKPYVTGQQCDQC 942
Query: 148 LPGYYGDPTDGGTCYYQCMARGMLT 172
LPGYYG T G C G ++
Sbjct: 943 LPGYYGLDTGLGCVPCNCSGEGSIS 967
Score = 194 (73.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 56/151 (37%), Positives = 72/151 (47%)
Query: 42 YCKGPPDY---SCQ-CELGWTGVD-------CSVNCLCNNHST-C-VHGIGICDECHDWT 88
+C+ P Y SC+ C G+ VD C C C+ HS+ C +HGI C C T
Sbjct: 715 HCECPQGYTGTSCEACLPGYYRVDGILFGGICQP-CECHGHSSECDIHGI--CSGCTHNT 771
Query: 89 TGDHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSITG--ECICQDNTQGK 142
TGDHC+ C G YG + T C+ C C + N+ C +T E +C G
Sbjct: 772 TGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSIDSNNFSPTCH-LTDREEVVCDQCAPGY 830
Query: 143 N---CERCLPGYYGDPT-DGGTCYYQCMARG 169
+ CERC GYYG+PT GGTC C G
Sbjct: 831 SGAWCERCADGYYGNPTVPGGTCV-PCNCSG 860
Score = 194 (73.4 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 53/142 (37%), Positives = 65/142 (45%)
Query: 38 CIYGYCKGP-PDYSCQCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDWTTGDHCQY 95
C GY +G P+ S + C V C CNNHS C G C C D T GDHC+
Sbjct: 1383 CAPGYHRGKLPESSGRGPRPLLA-PC-VPCNCNNHSDVCDPETGKCLNCRDHTAGDHCEL 1440
Query: 96 CRAGSYGNATTQEG-CRKCDCNSH---GNSVLGVCDSITGE-C-ICQDNTQGKNCERCLP 149
C AG YG G C C C H S V + +G C C +G+ CERC
Sbjct: 1441 CTAGYYGKVIGLPGDCTPCTCPHHPPFSFSPTCVLEGDSGFWCDACLPGYEGQYCERCSA 1500
Query: 150 GYYGDP-TDGGTCYY-QCMARG 169
GY+G+P GG+C C +G
Sbjct: 1501 GYHGNPRAAGGSCQKCDCNPQG 1522
Score = 190 (71.9 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 45/122 (36%), Positives = 62/122 (50%)
Query: 55 LGWTGVDCSVNCLCNNHS------TCV-HG-IGI-CDECHDWTTGDHCQYCRAGSYGNAT 105
+G G DC+ C C +H TCV G G CD C G +C+ C AG +GN
Sbjct: 1450 IGLPG-DCTP-CTCPHHPPFSFSPTCVLEGDSGFWCDACLPGYEGQYCERCSAGYHGNPR 1507
Query: 106 TQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQ 164
G C+KCDCN G SV CD +G+C+C+ G +CE CLP + + +C +
Sbjct: 1508 AAGGSCQKCDCNPQG-SVHSDCDRASGQCVCKPGATGLHCEECLPRHILMESHCVSCDDE 1566
Query: 165 CM 166
C+
Sbjct: 1567 CV 1568
Score = 160 (61.4 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 53/166 (31%), Positives = 68/166 (40%)
Query: 51 CQ-CELGWTGVDCSV-NC-LCNNHST-CVHGI-----GICDECHDWTTGDHCQYCRAGSY 101
C+ C G+ G + NC CN H + GI G+CD C + TG C C G Y
Sbjct: 889 CERCADGFYGDAVTAKNCRACNCHENGSLSGICHLETGLCD-CKPYVTGQQCDQCLPGYY 947
Query: 102 GNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGT- 160
G T GC C+C+ G S+ C G+C C GK C++C G+Y G T
Sbjct: 948 G-LDTGLGCVPCNCSGEG-SISDNCTE-EGQCHCVPGVSGKQCDQCSHGFYAFQNGGCTP 1004
Query: 161 --CYY---QCMARG--MLTGPGPQGLGSGLAERNAWEGKDTPSREC 199
C + C L P GL E W G D P + C
Sbjct: 1005 CDCAHTQNNCDPDSGECLCPPHTHGLKCEQCEEAFW-GLD-PEQGC 1048
Score = 158 (60.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 40/128 (31%), Positives = 55/128 (42%)
Query: 41 GYCKGPP---DYSC-QCELGWTGVDCSVNCL---CNNHSTCVHGIGICDECH--DWTTGD 91
G C P C QC G+ G+D + C+ C+ + +CH +G
Sbjct: 926 GLCDCKPYVTGQQCDQCLPGYYGLDTGLGCVPCNCSGEGSISDNCTEEGQCHCVPGVSGK 985
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
C C G Y A GC CDC N+ CD +GEC+C +T G CE+C +
Sbjct: 986 QCDQCSHGFY--AFQNGGCTPCDCAHTQNN----CDPDSGECLCPPHTHGLKCEQCEEAF 1039
Query: 152 YG-DPTDG 158
+G DP G
Sbjct: 1040 WGLDPEQG 1047
Score = 146 (56.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 48/151 (31%), Positives = 67/151 (44%)
Query: 41 GYCKGPPDYS---C-QCELGWTGVD---CSVNCLC-NNHSTCVHGIGICDECHDWTTGDH 92
G C P S C QC G+ C+ C C + + C G C C T G
Sbjct: 974 GQCHCVPGVSGKQCDQCSHGFYAFQNGGCTP-CDCAHTQNNCDPDSGEC-LCPPHTHGLK 1031
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ C +G ++GC+ C+C+ G S CD ++G+C C++ G++C +C GY
Sbjct: 1032 CEQCEEAFWG-LDPEQGCQACNCSVVG-STSPQCDVLSGQCSCKEGFGGQSCHQCSLGYR 1089
Query: 153 GDPTDGGTCYYQCMARGML--TGPGPQGLGS 181
P D C C RG L T QGL S
Sbjct: 1090 SFP-DCVPC--DCDLRGTLADTCDLEQGLCS 1117
Score = 142 (55.0 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 41/128 (32%), Positives = 60/128 (46%)
Query: 30 NASLCYNKCIYGYCKGP-PDYSCQ-CELGWTGVDCSVNCLCNN-HSTCVHGI--GICDEC 84
N C ++ + P D C+ C+ G SV C+ ++ H+ +G G C C
Sbjct: 379 NCETCIDQYYRPHKVSPYEDQPCRPCDCDPVGSLSSV-CIKDDLHADLANGKWPGQCP-C 436
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
GD C C+ G G C CDC++ G SV D T C+C+ N +G+NC
Sbjct: 437 RKGYAGDKCDRCQFGYRGFPN----CVPCDCSTVG-SVNE--DPCTEPCLCKKNVEGENC 489
Query: 145 ERCLPGYY 152
+RC PG+Y
Sbjct: 490 DRCKPGFY 497
Score = 138 (53.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 31/81 (38%), Positives = 40/81 (49%)
Query: 84 CHDWTTGDHCQYCRAGSY-GNATTQEG---------CRKCDCNSHGNSVLGVCDSITGEC 133
C T G CQ C G + G G C C+CN+H + VCD TG+C
Sbjct: 1371 CPPGTAGHSCQDCAPGYHRGKLPESSGRGPRPLLAPCVPCNCNNHSD----VCDPETGKC 1426
Query: 134 I-CQDNTQGKNCERCLPGYYG 153
+ C+D+T G +CE C GYYG
Sbjct: 1427 LNCRDHTAGDHCELCTAGYYG 1447
Score = 116 (45.9 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 40/129 (31%), Positives = 54/129 (41%)
Query: 7 ISGLTTAKDDALS-RCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVD-CSV 64
+ G T+ + D LS +C+ F C+ +C GY P C C+L T D C +
Sbjct: 1055 VVGSTSPQCDVLSGQCSCK--EGFGGQSCH-QCSLGYRSFPDCVPCDCDLRGTLADTCDL 1111
Query: 65 NC-LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSV 122
LC+ C G C C + G C CRAG++ A GC C C G S
Sbjct: 1112 EQGLCS----CTEDSGTCS-CKENVLGPQCDKCRAGTFALRADNPLGCSPCFC--FGLSQ 1164
Query: 123 LGVCDSITG 131
L C + G
Sbjct: 1165 L--CSELEG 1171
Score = 68 (29.0 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 133 CICQDNTQGKNCERCLPGYY 152
C+C T G +C+ C PGY+
Sbjct: 1369 CVCPPGTAGHSCQDCAPGYH 1388
Score = 61 (26.5 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 283 YKQG-KPSEGFNATYQIF-SCPDKCPENRTCINNQ-CVCPPRRTGPDCQE 329
Y QG + S N + ++ + PE + + + CVCPP G CQ+
Sbjct: 1333 YGQGLQQSRIANISMEVGRKAVEPAPEGKVALQLELCVCPPGTAGHSCQD 1382
Score = 57 (25.1 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 289 SEGFNATYQIFSC-PDKCPENRT-CI--NNQCVCPPRRTGPDCQE 329
S GF A +Q C P C + C + +C+CPP G C++
Sbjct: 991 SHGFYA-FQNGGCTPCDCAHTQNNCDPDSGECLCPPHTHGLKCEQ 1034
Score = 54 (24.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 313 NNQCVCPPRRTGPDCQE 329
+ QCVC P TG C+E
Sbjct: 1532 SGQCVCKPGATGLHCEE 1548
Score = 53 (23.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 16/49 (32%), Positives = 20/49 (40%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGT--CD 346
S D C E QC C P +G C + C + + F N G CD
Sbjct: 965 SISDNCTEE-----GQCHCVPGVSGKQCDQ--CSHGFYAFQNGGCTPCD 1006
Score = 43 (20.2 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 307 ENRTCINNQCVCPPRRTGPDCQEEICPNECH 337
+N C C PD E +CP H
Sbjct: 998 QNGGCTPCDCAHTQNNCDPDSGECLCPPHTH 1028
Score = 43 (20.2 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 17/55 (30%), Positives = 22/55 (40%)
Query: 287 KPSE--GFNATYQIFSCPDKCPENRTCIN-NQCV-----CPPRRTGPDCQEEICP 333
+P E G ++ I C N T + QC+ P R T DCQ CP
Sbjct: 747 QPCECHGHSSECDIHGICSGCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCACP 801
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 316 CVCPPRRTGPDCQ 328
C CP TG C+
Sbjct: 716 CECPQGYTGTSCE 728
Score = 37 (18.1 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 6/14 (42%), Positives = 7/14 (50%)
Query: 316 CVCPPRRTGPDCQE 329
C C P TG C +
Sbjct: 928 CDCKPYVTGQQCDQ 941
>UNIPROTKB|F1PJ02 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 OMA:EPFYWRL GO:GO:0005606
EMBL:AAEX03005489 EMBL:AAEX03005490 EMBL:AAEX03005491
Ensembl:ENSCAFT00000029520 Uniprot:F1PJ02
Length = 3034
Score = 226 (84.6 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 52/146 (35%), Positives = 70/146 (47%)
Query: 29 FNASLCYNKCIYGYCKGP--PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHD 86
++ S C +C GY P P SC +CS N C G C +C
Sbjct: 776 YSGSWC-ERCADGYYGNPTVPGESC------VPCNCSGNVDPFEAGHCDSVTGECLKCIG 828
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
T G HC+ C G YG+A T + CR C+C+ G S+ VC TG C C+ + G+ C++
Sbjct: 829 NTDGAHCERCADGFYGDAVTAKNCRACECHGKG-SISDVCHLDTGLCDCKPHVTGQQCDQ 887
Query: 147 CLPGYYGDPTDGGTCYYQCMARGMLT 172
CLPGYYG T G C A G ++
Sbjct: 888 CLPGYYGLDTGLGCLPCNCSASGSMS 913
Score = 196 (74.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 49/127 (38%), Positives = 59/127 (46%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDC-NSHGN 120
V C CNNHS C G C C TTG+HC C G YG T + C C C SH
Sbjct: 1354 VPCNCNNHSDACDPETGKCLNCSHSTTGEHCDVCAPGYYGKVTGSASDCSPCACPRSHPA 1413
Query: 121 SVLGVCDSITGE----C-ICQDNTQGKNCERCLPGYYGDPTD-GGTCYY-QCMARGMLTG 173
S C + G+ C C +G+ CERC GY+G+P GGTC C G + G
Sbjct: 1414 SFSPTC-VLEGDADFRCDACVLGYEGQYCERCSSGYHGNPRALGGTCQRCDCSPSGSVHG 1472
Query: 174 PGPQGLG 180
+G G
Sbjct: 1473 DCDRGSG 1479
Score = 190 (71.9 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 51/149 (34%), Positives = 69/149 (46%)
Query: 42 YCKGPPDY---SCQ-CELGWTGVD-------CSVNCLCNNHST-C-VHGIGICDECHDWT 88
+C+ P Y SC+ C G+ VD C C C+ H+ C +HG+ C C T
Sbjct: 661 HCECPQGYAGISCESCLPGYYRVDGILFGGICQP-CECHGHAAECDIHGV--CSVCKHNT 717
Query: 89 TGDHCQYCRAGSYG--NATTQEGCRKCDC--NSHGNSVLGVCDSITG-ECICQDNTQGKN 143
TGDHC+ C G YG + T C++C C ++ N+ C G E +C G +
Sbjct: 718 TGDHCEQCAPGFYGLPSRGTPGDCQRCACPLSTTSNNFSPTCHLEAGDEVVCDQCAPGYS 777
Query: 144 ---CERCLPGYYGDPTDGGTCYYQCMARG 169
CERC GYYG+PT G C G
Sbjct: 778 GSWCERCADGYYGNPTVPGESCVPCNCSG 806
Score = 169 (64.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/116 (35%), Positives = 59/116 (50%)
Query: 61 DCSVNCLC-NNHS-----TCV-HGIGI--CDECHDWTTGDHCQYCRAGSYGNATTQEG-C 110
DCS C C +H TCV G CD C G +C+ C +G +GN G C
Sbjct: 1401 DCSP-CACPRSHPASFSPTCVLEGDADFRCDACVLGYEGQYCERCSSGYHGNPRALGGTC 1459
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
++CDC+ G SV G CD +G+C+C+ G CE+C P + +D +C +C+
Sbjct: 1460 QRCDCSPSG-SVHGDCDRGSGQCVCRPGATGLRCEQCEPRHILLESDCVSCDDECV 1514
Score = 168 (64.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 46/138 (33%), Positives = 59/138 (42%)
Query: 41 GYCKGPPDYS---C-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDE---CH--DWTTGD 91
G C P + C QC G+ G+D + CL N S C E CH G+
Sbjct: 872 GLCDCKPHVTGQQCDQCLPGYYGLDTGLGCLPCNCSASGSMSDDCTEDGQCHCLPGVAGE 931
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
C C G Y A GC CDC +H CD +G CIC +T+G C++C GY
Sbjct: 932 KCDRCARGFY--AYQDGGCTPCDC-AHTQHT---CDPESGACICPPHTRGATCDQCEDGY 985
Query: 152 YGDPTDGGTCYYQCMARG 169
+G + G C A G
Sbjct: 986 WGHDLELGCQACNCSAVG 1003
Score = 153 (58.9 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 42/119 (35%), Positives = 57/119 (47%)
Query: 66 CLC-NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG 124
C C + TC G C C T G C C G +G+ + GC+ C+C++ G++ G
Sbjct: 951 CDCAHTQHTCDPESGACI-CPPHTRGATCDQCEDGYWGH-DLELGCQACNCSAVGSASHG 1008
Query: 125 VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGML--TGPGPQGLGS 181
CD++TG C C+ G +C +C GY P D C C RG L T QGL S
Sbjct: 1009 -CDALTGHCPCKPAFGGLSCHQCSLGYRDFP-DCVAC--DCDLRGTLADTCDEEQGLCS 1063
Score = 137 (53.3 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 84 CHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQG 141
C D G H + + GS G C C+CN+H ++ CD TG+C+ C +T G
Sbjct: 1326 CQDCAPGYHRGKLPQGGSRGPRPLLAPCVPCNCNNHSDA----CDPETGKCLNCSHSTTG 1381
Query: 142 KNCERCLPGYYGDPTDGGTCYYQC 165
++C+ C PGYYG T + C
Sbjct: 1382 EHCDVCAPGYYGKVTGSASDCSPC 1405
Score = 106 (42.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 30/90 (33%), Positives = 38/90 (42%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVD-CSVNC-LCNNHSTCVHGIGICDECHD 86
F C+ +C GY P +C C+L T D C LC+ C G C C +
Sbjct: 1022 FGGLSCH-QCSLGYRDFPDCVACDCDLRGTLADTCDEEQGLCS----CAEDTGTCS-CKE 1075
Query: 87 WTTGDHCQYCRAGSYG-NATTQEGCRKCDC 115
G C CRAG+Y +A GC C C
Sbjct: 1076 NVLGLQCSECRAGTYALHADDPLGCIPCFC 1105
Score = 74 (31.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 128 SITGECICQDNTQGKNCERCLPGYY-GDPTDGGT 160
S+ +C+C T G +C+ C PGY+ G GG+
Sbjct: 1310 SLLEKCLCPPGTAGFSCQDCAPGYHRGKLPQGGS 1343
Score = 50 (22.7 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 14/46 (30%), Positives = 18/46 (39%)
Query: 286 GKPSEGFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQE 329
G P T Q C + C + QCVC P TG C++
Sbjct: 1450 GNP-RALGGTCQRCDCSPSGSVHGDCDRGSGQCVCRPGATGLRCEQ 1494
Score = 49 (22.3 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 315 QCVCPPRRTGPDCQE 329
+C+CPP G CQ+
Sbjct: 1314 KCLCPPGTAGFSCQD 1328
>WB|WBGene00013416 [details] [associations]
symbol:Y64G10A.7 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:AL110498
EMBL:AL117206 GeneID:178377 KEGG:cel:CELE_Y64G10A.7 CTD:178377
RefSeq:NP_001255802.1 ProteinModelPortal:G5EFX3 SMR:G5EFX3
EnsemblMetazoa:Y64G10A.7b WormBase:Y64G10A.7b OMA:RIEMEVI
Uniprot:G5EFX3
Length = 1714
Score = 196 (74.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 48/121 (39%), Positives = 65/121 (53%)
Query: 37 KCIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
+CI G+ GP SC+ C G G +C+ C C N ++C G C EC +G+HC+
Sbjct: 1207 ECIDGWT-GP---SCEFLCPFGQFGRNCAQRCNCKNGASCDRKTGRC-ECLPGWSGEHCE 1261
Query: 95 Y-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYY 152
C +G YG A +E C +C+ N L CD I+G C CQ +GK C R CL GY+
Sbjct: 1262 KSCVSGHYG-AKCEETC-ECE-----NGAL--CDPISGHCSCQPGWRGKKCNRPCLKGYF 1312
Query: 153 G 153
G
Sbjct: 1313 G 1313
Score = 178 (67.7 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 44/131 (33%), Positives = 65/131 (49%)
Query: 30 NASLCYNKCIYGYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC I G+C P + C C G+ G CS +C C N +C H G C +C
Sbjct: 1281 NGALC--DPISGHCSCQPGWRGKKCNRPCLKGYFGRHCSQSCRCANSKSCDHISGRC-QC 1337
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
G C + C G++G + +Q KCDC NS+ CD+I+G+C C+ G +
Sbjct: 1338 PKGYAGHSCTELCPDGTFGESCSQ----KCDCGE--NSM---CDAISGKCFCKPGHSGSD 1388
Query: 144 CER-CLPGYYG 153
C+ C+ G +G
Sbjct: 1389 CKSGCVQGRFG 1399
Score = 175 (66.7 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 50/161 (31%), Positives = 74/161 (45%)
Query: 39 IYGYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G+C P + +C+ C G G +C +CLC + C G C EC D TG C
Sbjct: 1159 VTGFCDCPSGFMGKNCESECPEGLWGSNCMKHCLCMHGGECNKENGDC-ECIDGWTGPSC 1217
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGY 151
++ C G +G Q +C+C + G S CD TG C C G++CE+ C+ G+
Sbjct: 1218 EFLCPFGQFGRNCAQ----RCNCKN-GAS----CDRKTGRCECLPGWSGEHCEKSCVSGH 1268
Query: 152 YGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGK 192
YG + TC +C G L P + + + W GK
Sbjct: 1269 YGAKCEE-TC--EC-ENGALCDP----ISGHCSCQPGWRGK 1301
Score = 173 (66.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 58/171 (33%), Positives = 72/171 (42%)
Query: 27 YIFNASL---CYN--KC--IYGYCKGPPD-YS--CQ--CELGWTGVDCSVNCLCNNHSTC 74
Y N +L CY +C + G C PP Y CQ C G+ G CS +C C N + C
Sbjct: 1526 YGLNCTLDCECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCSQSCSCQNGAHC 1585
Query: 75 VHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGEC 133
G C C GD C Q C GS+G A +Q+ C+C + CD+ G+C
Sbjct: 1586 DGADGRC-LCPAGFQGDKCEQKCSEGSFGPACSQQ----CNCGKYK------CDATDGKC 1634
Query: 134 ICQDNTQGKNCER-CLPGYYGDPTDGGT-CYY--QCMARGMLTGPGPQGLG 180
IC G CE C PG YG C+ C AR P LG
Sbjct: 1635 ICPVGRHGPLCEEECRPGRYGQSCQNKCQCFNGATCDARTGQCSCSPGWLG 1685
Score = 162 (62.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 48/145 (33%), Positives = 64/145 (44%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDW 87
NAS KC G+ GP SC+ C G G++C+++C C + C G CD C
Sbjct: 1500 NASSGECKCNLGFT-GP---SCEQSCPSGKYGLNCTLDCECYGQARCDPVQGCCD-CPPG 1554
Query: 88 TTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE- 145
G CQ+ C G YG +Q C C + + CD G C+C QG CE
Sbjct: 1555 RYGSRCQFSCPNGFYGWYCSQS----CSCQNGAH-----CDGADGRCLCPAGFQGDKCEQ 1605
Query: 146 RCLPGYYGDPTDGGTCY---YQCMA 167
+C G +G P C Y+C A
Sbjct: 1606 KCSEGSFG-PACSQQCNCGKYKCDA 1629
Score = 162 (62.1 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 88/324 (27%), Positives = 119/324 (36%)
Query: 34 CYN--KCIY--GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C N KC G C P + +C C G G+DC C C N + C G C EC
Sbjct: 925 CVNGAKCDESDGSCHCTPGFYGATCSEVCPTGRFGIDCMQLCKCQNGAICDTSNGSC-EC 983
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
+G C + C G++G ++ +KCDC + G CD GECIC +G
Sbjct: 984 APGWSGKKCDKACAPGTFG----KDCSKKCDC-ADGMH----CDPSDGECICPPGKKGHK 1034
Query: 144 C-ERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGK--DTPSRECL 200
C E C G +G G C C G + R W GK D P +
Sbjct: 1035 CDETCDSGLFGAGCKG-IC--SCQ-----NGATCDSVTGSCECRPGWRGKKCDRPCPDGR 1086
Query: 201 W-----IIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVG-GTH-Q 253
+ I +N T+ + + R + C A + G PD TS G H +
Sbjct: 1087 FGEGCNAICDCTTTNDTSMYNPFVARCD-HVTGECRCPAGWT--G-PDCQTSCPLGRHGE 1142
Query: 254 STTLGVFCTE--DMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTC 311
C+ R + SG M + + P EG + + C C C
Sbjct: 1143 GCRHSCQCSNGASCDRVTGFCDCPSGFMGKNCESECP-EGLWGSNCMKHC--LCMHGGEC 1199
Query: 312 I--NNQCVCPPRRTGPDCQEEICP 333
N C C TGP C E +CP
Sbjct: 1200 NKENGDCECIDGWTGPSC-EFLCP 1222
Score = 151 (58.2 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 45/147 (30%), Positives = 64/147 (43%)
Query: 16 DALSRCTVLL-LYIFNASLCYNKCIYGYCKGP-----PDYSCQCELGWTGVDCSVNCLCN 69
+A+ CT ++N + + G C+ P PD C LG G C +C C+
Sbjct: 1092 NAICDCTTTNDTSMYNPFVARCDHVTGECRCPAGWTGPDCQTSCPLGRHGEGCRHSCQCS 1151
Query: 70 NHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCD 127
N ++C G CD C G +C+ C G +G+ C K C C HG G C+
Sbjct: 1152 NGASCDRVTGFCD-CPSGFMGKNCESECPEGLWGS-----NCMKHCLC-MHG----GECN 1200
Query: 128 SITGECICQDNTQGKNCERCLP-GYYG 153
G+C C D G +CE P G +G
Sbjct: 1201 KENGDCECIDGWTGPSCEFLCPFGQFG 1227
Score = 147 (56.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 43/133 (32%), Positives = 59/133 (44%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N ++C G C+ P +S C C G G DCS C C + C G C C
Sbjct: 970 NGAICDTS--NGSCECAPGWSGKKCDKACAPGTFGKDCSKKCDCADGMHCDPSDGECI-C 1026
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G C + C +G +G GC+ C C + G CDS+TG C C+ +GK
Sbjct: 1027 PPGKKGHKCDETCDSGLFG-----AGCKGICSCQN-G----ATCDSVTGSCECRPGWRGK 1076
Query: 143 NCER-CLPGYYGD 154
C+R C G +G+
Sbjct: 1077 KCDRPCPDGRFGE 1089
Score = 147 (56.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 49/145 (33%), Positives = 61/145 (42%)
Query: 30 NASLCYNKCIYGYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +C + G C PP Y C+ C+ G C C C N TC G C C
Sbjct: 1410 NGGVCDSST--GSCVCPPGYIGTKCEIACQSDRFGPTCEKICNCENGGTCDRLTGQC-RC 1466
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDC-NSHGNSVLGVCDSITGECICQDNTQG 141
TG C Q C G +G GC+ KC C N H C++ +GEC C G
Sbjct: 1467 LPGFTGMTCNQVCPEGRFG-----AGCKEKCRCANGH-------CNASSGECKCNLGFTG 1514
Query: 142 KNCERCLP-GYYG-DPTDGGTCYYQ 164
+CE+ P G YG + T CY Q
Sbjct: 1515 PSCEQSCPSGKYGLNCTLDCECYGQ 1539
Score = 145 (56.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 64/201 (31%), Positives = 80/201 (39%)
Query: 30 NASLCYNKCIYGYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N+ C + I G C+ P Y SC C G G CS C C +S C G C C
Sbjct: 1324 NSKSCDH--ISGRCQCPKGYAGHSCTELCPDGTFGESCSQKCDCGENSMCDAISGKCF-C 1380
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
+G C+ C G +G Q C C + G GVCDS TG C+C G
Sbjct: 1381 KPGHSGSDCKSGCVQGRFGPDCNQ----LCSCEN-G----GVCDSSTGSCVCPPGYIGTK 1431
Query: 144 CE-RCLPGYYGDPT--------DGGTCYY---QCMARGMLTGPG-----PQG-LGSGLAE 185
CE C +G PT +GGTC QC TG P+G G+G E
Sbjct: 1432 CEIACQSDRFG-PTCEKICNCENGGTCDRLTGQCRCLPGFTGMTCNQVCPEGRFGAGCKE 1490
Query: 186 R-NAWEGK-DTPSRECLWIIG 204
+ G + S EC +G
Sbjct: 1491 KCRCANGHCNASSGECKCNLG 1511
Score = 136 (52.9 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 80/312 (25%), Positives = 111/312 (35%)
Query: 43 CKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-- 95
C P Y+ C+ C G+ GVDC+ C C C G C C D + C
Sbjct: 674 CDCPSGYTGEKCEQICRNGYWGVDCAHKCSCK---LCDPSTGSC-RCED---PEKCSDGP 726
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C G YG+ + CR DC + G CD + G C C D G++CE+ P +
Sbjct: 727 CPDGFYGSQCNLK-CRM-DCPN------GRCDPVFGYCTCPDGLYGQSCEKPCPHF---- 774
Query: 156 TDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECL-WIIGQSLDSNSTAP 214
T G C + C G + + + G R C + G + P
Sbjct: 775 TFGKNCRFPCKC-ARENSEGCDEITGKCRCKPGYYGHHC-KRMCSPGLFGAGCAMKCSCP 832
Query: 215 ADIILLRLQPDINVPCNENAVYIYDG-LPDFVTSVGGTHQSTTLGVFCTE--DMHRGYEV 271
A I R P + C + Y G L D G C + H+ +V
Sbjct: 833 AGI---RCDP-VTGDCTKKCPAGYQGNLCDQPCPAGYFGYDCEQKCSCADVASPHKS-KV 887
Query: 272 LEAKSGVMT-IHYKQGKPSEGFNA--TY-----QIFSCPD--KCPENRTCINNQCVCPPR 321
+G T + K G + A TY SC + KC E+ + C C P
Sbjct: 888 CHHVTGTCTCLPGKTGPLCDQSCAPNTYGPNCAHTCSCVNGAKCDES----DGSCHCTPG 943
Query: 322 RTGPDCQEEICP 333
G C E +CP
Sbjct: 944 FYGATCSE-VCP 954
Score = 129 (50.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 44/142 (30%), Positives = 55/142 (38%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N + C K G C+ P +S C+ C G G C C C N + C G C C
Sbjct: 1238 NGASCDRKT--GRCECLPGWSGEHCEKSCVSGHYGAKCEETCECENGALCDPISGHCS-C 1294
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
G C C G +G +Q CR C NS CD I+G C C G +
Sbjct: 1295 QPGWRGKKCNRPCLKGYFGRHCSQS-CR-C-ANSKS------CDHISGRCQCPKGYAGHS 1345
Query: 144 CERCLPGYYGDPTDGGTCYYQC 165
C P D T G +C +C
Sbjct: 1346 CTELCP----DGTFGESCSQKC 1363
Score = 128 (50.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 43/135 (31%), Positives = 56/135 (41%)
Query: 50 SCQCELGWTGVDCSVNCLCNNHS-TCVHGIGICD--ECHDWTTGDHCQYCRAGSYGNATT 106
+C C G TG C +C N + C H + +C D + G C +C G YG AT
Sbjct: 894 TCTCLPGKTGPLCDQSCAPNTYGPNCAHTCSCVNGAKC-DESDGS-C-HCTPGFYG-ATC 949
Query: 107 QEGCRK----CDCNSHGNSVLG-VCDSITGECICQDNTQGKNCER-CLPGYYGDPTDGGT 160
E C DC G +CD+ G C C GK C++ C PG +G
Sbjct: 950 SEVCPTGRFGIDCMQLCKCQNGAICDTSNGSCECAPGWSGKKCDKACAPGTFGKD----- 1004
Query: 161 CYYQC-MARGMLTGP 174
C +C A GM P
Sbjct: 1005 CSKKCDCADGMHCDP 1019
Score = 109 (43.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 46/154 (29%), Positives = 56/154 (36%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNN----HST--CVHGIGICDECHDW 87
C KC GY D C G+ G DC C C + H + C H G C C
Sbjct: 844 CTKKCPAGYQGNLCDQPCPA--GYFGYDCEQKCSCADVASPHKSKVCHHVTGTCT-CLPG 900
Query: 88 TTGDHC-QYCRAGSYG-NATTQEGC---RKCD-----CNSHGNSVLGVCDSI--TGE--- 132
TG C Q C +YG N C KCD C+ C + TG
Sbjct: 901 KTGPLCDQSCAPNTYGPNCAHTCSCVNGAKCDESDGSCHCTPGFYGATCSEVCPTGRFGI 960
Query: 133 -----CICQD----NTQGKNCERCLPGYYGDPTD 157
C CQ+ +T +CE C PG+ G D
Sbjct: 961 DCMQLCKCQNGAICDTSNGSCE-CAPGWSGKKCD 993
Score = 78 (32.5 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 300 SCPDKCPENR-TC--INNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHGTCD 346
+C +C + C + +C+CP R GP C+EE C N+C F N TCD
Sbjct: 1615 ACSQQCNCGKYKCDATDGKCICPVGRHGPLCEEECRPGRYGQSCQNKCQCF-NGATCD 1671
Score = 75 (31.5 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 300 SCPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEICPN----ECHEFL---NHGTCD 346
SC KC EN C I+ +C C P +G DC+ +C++ N G CD
Sbjct: 1358 SCSQKCDCGENSMCDAISGKCFCKPGHSGSDCKSGCVQGRFGPDCNQLCSCENGGVCD 1415
Score = 70 (29.7 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 23/66 (34%), Positives = 28/66 (42%)
Query: 286 GKPSEGFNATYQIFSCPDKCPEN---RTC--INNQCVCPPRRTGPDCQEEICPNECH-EF 339
G+ EG NA + D N C + +C CP TGPDCQ CP H E
Sbjct: 1085 GRFGEGCNAICDCTTTNDTSMYNPFVARCDHVTGECRCPAGWTGPDCQTS-CPLGRHGEG 1143
Query: 340 LNHGTC 345
H +C
Sbjct: 1144 CRH-SC 1148
Score = 67 (28.6 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 17/40 (42%), Positives = 19/40 (47%)
Query: 300 SCPDKCP--ENRTCI--NNQCVCPPRRTGPDCQEEIC-PN 334
SC +KC TC QC C P GP CQ E+ PN
Sbjct: 1657 SCQNKCQCFNGATCDARTGQCSCSPGWLGPTCQIEMMDPN 1696
Score = 66 (28.3 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 284 KQGKPS-EGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
K +P +G+ + SC +C +++C I+ +C CP G C E +CP+
Sbjct: 1302 KCNRPCLKGYFGRHCSQSC--RCANSKSCDHISGRCQCPKGYAGHSCTE-LCPD 1352
Score = 64 (27.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 19/47 (40%), Positives = 21/47 (44%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTG 351
CP + C R GP C E+IC C N GTCD L TG
Sbjct: 1423 CPPGYIGTKCEIACQSDRFGPTC-EKIC--NCE---NGGTCDRL-TG 1462
Score = 64 (27.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 26/83 (31%), Positives = 32/83 (38%)
Query: 284 KQGKPSE--GFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEF 339
+Q PS G N T C +C C + C CPP R G CQ CPN + +
Sbjct: 1518 EQSCPSGKYGLNCT---LDC--ECYGQARCDPVQGCCDCPPGRYGSRCQFS-CPNGFYGW 1571
Query: 340 LNHGTCDLLLTGVHI--THGRTL 360
+C G H GR L
Sbjct: 1572 YCSQSCSCQ-NGAHCDGADGRCL 1593
Score = 62 (26.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 310 TCINNQCVCPPRRTGPDCQEEI-CPN-ECHEFLNHGTCDLLLTG 351
TC NQ VCP R G C+E+ C N C+ C+L TG
Sbjct: 1474 TC--NQ-VCPEGRFGAGCKEKCRCANGHCNASSGECKCNLGFTG 1514
Score = 59 (25.8 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C TC + QC C P TG C + +CP
Sbjct: 1451 CENGGTCDRLTGQCRCLPGFTGMTCNQ-VCP 1480
Score = 59 (25.8 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 301 CPDKCP-ENRTC--INNQCVCPPRRTGPDCQEEICPN 334
C +KC N C + +C C TGP C E+ CP+
Sbjct: 1488 CKEKCRCANGHCNASSGECKCNLGFTGPSC-EQSCPS 1523
Score = 50 (22.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 291 GFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEE 330
GF Y SC C C + +C+CP G C+++
Sbjct: 1567 GFYGWYCSQSC--SCQNGAHCDGADGRCLCPAGFQGDKCEQK 1606
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 301 CPDKCP-ENRT-C--INNQCVCPPRRTGPDC 327
C + C EN C I+ C C P G C
Sbjct: 1273 CEETCECENGALCDPISGHCSCQPGWRGKKC 1303
>ZFIN|ZDB-GENE-060503-252 [details] [associations]
symbol:megf11 "multiple EGF-like-domains 11"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR007527
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS50966 PROSITE:PS51041
SMART:SM00181 ZFIN:ZDB-GENE-060503-252 GO:GO:0008270
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:BX890618
EMBL:BX908395 EMBL:CR788229 IPI:IPI00785724
Ensembl:ENSDART00000090855 Uniprot:F1Q4V3
Length = 1114
Score = 197 (74.4 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 58/149 (38%), Positives = 70/149 (46%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N LC + I G C+ YS CQ C +G G C+++C C N + C H G C C
Sbjct: 285 NGGLCDH--ITGQCQCMAGYSGHRCQEECPVGTYGPQCTLHCDCQNGAKCYHINGAC-LC 341
Query: 85 HDWTTGDHCQ--YCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQG 141
G HCQ +C G YG C K C CNS N++ C +TGEC C G
Sbjct: 342 DTGFKGHHCQDRFCPPGLYGLI-----CDKYCPCNST-NTIS--CHPLTGECSCTAGWTG 393
Query: 142 KNC-ERCLPGYYGDPTDGGTCYYQCMARG 169
C E C PGYYG+ G C QC A G
Sbjct: 394 LYCNETCPPGYYGEGC-GVPC--QC-ANG 418
Score = 188 (71.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 56/166 (33%), Positives = 72/166 (43%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGI------GI 80
C +C +G C P +CQCE GW G+DCS C C+N C +G G
Sbjct: 109 CSEECAHGRCVSPD--TCQCEPGWGGLDCSSGCESGYWGPHCSNRCQCKNGALCNPITGA 166
Query: 81 CDECHDWTTGDHCQ-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDN 138
C C D G C+ C G YG +GC+ +C C +G C TGECIC
Sbjct: 167 C-VCTDGYQGWRCEDLCEPGYYG-----KGCQLQCQC-LNG----ATCHHETGECICAPG 215
Query: 139 TQGKNC-ERCLPGYYGDPTD-------GGTCYY---QCMARGMLTG 173
G C ERC G +G + GGTC++ +C TG
Sbjct: 216 YMGPICGERCPSGSHGPQCEQRCPCQNGGTCHHITGECSCPAGWTG 261
Score = 176 (67.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 53/136 (38%), Positives = 64/136 (47%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCS------------VN-CLCNNHSTCVHGIG 79
LC N G C P D SCQC GWTG DCS +N C C+N + C G
Sbjct: 674 LCTNN---GTCN-PIDGSCQCFPGWTGDDCSQICPIGQWGPDCLNSCNCHNGAQCSAYDG 729
Query: 80 ICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
C WT G +C Q C +G YG E CR C + + CD ITG+C C+
Sbjct: 730 ECRCSLGWT-GLYCTQRCPSGFYGRDCA-EVCR---CQNGAD-----CDHITGQCACRTG 779
Query: 139 TQGKNCE-RCLPGYYG 153
G NCE +C PG +G
Sbjct: 780 FIGTNCEQKCPPGTFG 795
Score = 172 (65.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 51/148 (34%), Positives = 63/148 (42%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N + C+++ G C P Y C +C G G C C C N TC H G C
Sbjct: 199 NGATCHHET--GECICAPGYMGPICGERCPSGSHGPQCEQRCPCQNGGTCHHITGECSCP 256
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
WT G C Q C G YG ++E C C + G G+CD ITG+C C G
Sbjct: 257 AGWT-GSVCAQPCPFGKYGINCSKE----CSCRN-G----GLCDHITGQCQCMAGYSGHR 306
Query: 144 C-ERCLPGYYG-------DPTDGGTCYY 163
C E C G YG D +G CY+
Sbjct: 307 CQEECPVGTYGPQCTLHCDCQNGAKCYH 334
Score = 167 (63.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 50/155 (32%), Positives = 66/155 (42%)
Query: 15 DDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL------- 67
DD C L S+C+ C P D SC C+ GW GVDCS+ C
Sbjct: 437 DDCSQTCPSGLFGTNCTSICH--CHNQASCSPIDGSCICKEGWQGVDCSILCSSGTWGLG 494
Query: 68 CNNHSTCVHGIGICDE------CHDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHG 119
CN C +G CD C G+ CQ C G+Y + CR +CDCN H
Sbjct: 495 CNQTCLCANGAA-CDPIDGSCTCSSGWRGERCQQPCPDGTY-----ELECRERCDCN-HA 547
Query: 120 NSVLGVCDSITGECICQDNTQGKNCERCLP-GYYG 153
+ CD ++G C C G +C+ P G++G
Sbjct: 548 DG----CDHVSGLCRCLPGWTGIHCDSICPQGFWG 578
Score = 162 (62.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 41/131 (31%), Positives = 55/131 (41%)
Query: 38 CIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVHGIGICDEC 84
C G P D SC C GW G ++C C CN+ C H G+C
Sbjct: 501 CANGAACDPIDGSCTCSSGWRGERCQQPCPDGTYELECRERCDCNHADGCDHVSGLCRCL 560
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
WT G HC C G +G+ + C C + G+ C G C+C +G +
Sbjct: 561 PGWT-GIHCDSICPQGFWGSNCSMT----CSCQNGGS-----CSPEDGTCVCAPGYRGTS 610
Query: 144 CER-CLPGYYG 153
C+R C PG+YG
Sbjct: 611 CKRICPPGFYG 621
Score = 157 (60.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 54/157 (34%), Positives = 68/157 (43%)
Query: 30 NASLCYNKCIYGYC---KGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC N I G C G + C+ CE G+ G C + C C N +TC H G C C
Sbjct: 156 NGALC-NP-ITGACVCTDGYQGWRCEDLCEPGYYGKGCQLQCQCLNGATCHHETGECI-C 212
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
G C + C +GS+G Q +C C + G G C ITGEC C G
Sbjct: 213 APGYMGPICGERCPSGSHGPQCEQ----RCPCQN-G----GTCHHITGECSCPAGWTGSV 263
Query: 144 CERCLP-GYYG-------DPTDGGTCYY-----QCMA 167
C + P G YG +GG C + QCMA
Sbjct: 264 CAQPCPFGKYGINCSKECSCRNGGLCDHITGQCQCMA 300
Score = 147 (56.8 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 40/130 (30%), Positives = 56/130 (43%)
Query: 34 CYNKCIY--GYCKGPPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVHGI 78
C N C G D C+C LGWTG+ DC+ C C N + C H
Sbjct: 712 CLNSCNCHNGAQCSAYDGECRCSLGWTGLYCTQRCPSGFYGRDCAEVCRCQNGADCDHIT 771
Query: 79 GICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQ 136
G C C G +C Q C G++G GC++ C+C ++ CD +TG C C
Sbjct: 772 GQC-ACRTGFIGTNCEQKCPPGTFGY-----GCQQLCECMNNAT-----CDYVTGTCYCS 820
Query: 137 DNTQGKNCER 146
+G C++
Sbjct: 821 PGYKGIRCDQ 830
Score = 145 (56.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 44/142 (30%), Positives = 61/142 (42%)
Query: 20 RCTVLLLY-IFNASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHST 73
RC+ L + + C++ + G+C+ + C C G G C+ CLC N+ T
Sbjct: 623 RCSQLCPQCVHSTGPCHH--VTGHCECLAGFFGSLCNQVCPSGKFGKACAEICLCTNNGT 680
Query: 74 CVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
C G C +C TGD C Q C G +G C CN H + C + GE
Sbjct: 681 CNPIDGSC-QCFPGWTGDDCSQICPIGQWG-----PDCLN-SCNCHNGAQ---CSAYDGE 730
Query: 133 CICQDNTQGKNC-ERCLPGYYG 153
C C G C +RC G+YG
Sbjct: 731 CRCSLGWTGLYCTQRCPSGFYG 752
Score = 141 (54.7 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 36/104 (34%), Positives = 48/104 (46%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDHC-QYCRAGSYGNATTQEGC 110
C G+ G C V C C N + C H + G C C TGD C Q C +G +G T
Sbjct: 400 CPPGYYGEGCGVPCQCANGADC-HSLTGACI-CAPGYTGDDCSQTCPSGLFGTNCTSI-- 455
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
C C++ + C I G CIC++ QG +C C G +G
Sbjct: 456 --CHCHNQAS-----CSPIDGSCICKEGWQGVDCSILCSSGTWG 492
Score = 136 (52.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 40/132 (30%), Positives = 61/132 (46%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTC--VHGIGICD 82
N + C++ + G C P Y+ C C G G +C+ C C+N ++C + G IC
Sbjct: 417 NGADCHS--LTGACICAPGYTGDDCSQTCPSGLFGTNCTSICHCHNQASCSPIDGSCICK 474
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQG 141
E W D C +G++G GC + C C ++G CD I G C C +G
Sbjct: 475 E--GWQGVDCSILCSSGTWGL-----GCNQTCLC-ANG----AACDPIDGSCTCSSGWRG 522
Query: 142 KNCER-CLPGYY 152
+ C++ C G Y
Sbjct: 523 ERCQQPCPDGTY 534
Score = 133 (51.9 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 41/137 (29%), Positives = 57/137 (41%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C+ P ++ C C G+ G +CS+ C C N +C G C C G C
Sbjct: 553 VSGLCRCLPGWTGIHCDSICPQGFWGSNCSMTCSCQNGGSCSPEDGTC-VCAPGYRGTSC 611
Query: 94 Q-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GY 151
+ C G YG+ +Q C +C H G C +TG C C G C + P G
Sbjct: 612 KRICPPGFYGHRCSQL-CPQC---VHST---GPCHHVTGHCECLAGFFGSLCNQVCPSGK 664
Query: 152 YGDP-------TDGGTC 161
+G T+ GTC
Sbjct: 665 FGKACAEICLCTNNGTC 681
Score = 120 (47.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 40/124 (32%), Positives = 54/124 (43%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ-YCRAGSYGNATTQEGCR 111
C G+ G +CS+ C C N +C G C C G C+ C G YG+ +Q C
Sbjct: 572 CPQGFWGSNCSMTCSCQNGGSCSPEDGTC-VCAPGYRGTSCKRICPPGFYGHRCSQL-CP 629
Query: 112 KC-DCNSHGNSVLGVCDSITGE----C--ICQDNTQGKNC-ERCLPGYYG--DPTDGGTC 161
+C + V G C+ + G C +C GK C E CL G +P DG +C
Sbjct: 630 QCVHSTGPCHHVTGHCECLAGFFGSLCNQVCPSGKFGKACAEICLCTNNGTCNPIDG-SC 688
Query: 162 YYQC 165
QC
Sbjct: 689 --QC 690
Score = 113 (44.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 45/152 (29%), Positives = 59/152 (38%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ-- 94
+C+ GY G +C +G G C+++C C N + C H G C C G HCQ
Sbjct: 297 QCMAGY-SGHRCQE-ECPVGTYGPQCTLHCDCQNGAKCYHINGAC-LCDTGFKGHHCQDR 353
Query: 95 YCRAGSYG---------NATTQEGCR----KCDCNSHGNSVL--GVCD-SITGE-C--IC 135
+C G YG N+T C +C C + + C GE C C
Sbjct: 354 FCPPGLYGLICDKYCPCNSTNTISCHPLTGECSCTAGWTGLYCNETCPPGYYGEGCGVPC 413
Query: 136 QDNTQGKNCER------CLPGYYGDPTDGGTC 161
Q G +C C PGY GD TC
Sbjct: 414 QC-ANGADCHSLTGACICAPGYTGDDCSQ-TC 443
Score = 112 (44.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 53/187 (28%), Positives = 74/187 (39%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYG-NATTQEGC 110
C G G++CS C C N C H G C +C +G CQ C G+YG T C
Sbjct: 268 CPFGKYGINCSKECSCRNGGLCDHITGQC-QCMAGYSGHRCQEECPVGTYGPQCTLHCDC 326
Query: 111 RK-CDCNSHGNSVLGVCDS-ITGE-C---ICQDNTQGKNCERCLPGYYGDPTDGGTCYY- 163
+ C H N +CD+ G C C G C++ P + T+ +C+
Sbjct: 327 QNGAKCY-HINGAC-LCDTGFKGHHCQDRFCPPGLYGLICDKYCPC---NSTNTISCHPL 381
Query: 164 --QCMARGMLTG--------PGPQGLGSGLAERNAWEGKDTPSRE--CLWIIGQSLDSNS 211
+C TG PG G G G+ + A G D S C+ G + D S
Sbjct: 382 TGECSCTAGWTGLYCNETCPPGYYGEGCGVPCQCA-NGADCHSLTGACICAPGYTGDDCS 440
Query: 212 -TAPADI 217
T P+ +
Sbjct: 441 QTCPSGL 447
Score = 110 (43.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 38/122 (31%), Positives = 49/122 (40%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHST-CVHGIGICDECHDWTTGDH 92
G C P D +C C G+ G C C C+ CVH G CH TG H
Sbjct: 591 GSCS-PEDGTCVCAPGYRGTSCKRICPPGFYGHRCSQLCPQCVHSTG---PCHH-VTG-H 644
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ C AG +G+ Q C G + +C T C N +C+ C PG+
Sbjct: 645 CE-CLAGFFGSLCNQV----CPSGKFGKACAEIC-LCTNNGTC--NPIDGSCQ-CFPGWT 695
Query: 153 GD 154
GD
Sbjct: 696 GD 697
Score = 72 (30.4 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C N TC I+ C C P TG DC + ICP
Sbjct: 675 CTNNGTCNPIDGSCQCFPGWTGDDCSQ-ICP 704
Score = 67 (28.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
P +C C + C+C P TG DC + CP+
Sbjct: 412 PCQCANGADCHSLTGACICAPGYTGDDCSQT-CPS 445
Score = 61 (26.5 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNE----CH---EFLNHGTCDLLLTG 351
+C C I QC C G +C+++ P C E +N+ TCD + TG
Sbjct: 760 RCQNGADCDHITGQCACRTGFIGTNCEQKCPPGTFGYGCQQLCECMNNATCDYV-TG 815
Score = 60 (26.2 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 317 VCPPRRTGPDCQEEI-CPN--ECHEFLNHGTCDLLLTGVHIT 355
+CP + GPDC C N +C + C L TG++ T
Sbjct: 702 ICPIGQWGPDCLNSCNCHNGAQCSAYDGECRCSLGWTGLYCT 743
Score = 59 (25.8 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 26/92 (28%), Positives = 33/92 (35%)
Query: 290 EGFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDL 347
+GF + +C C +C + CVC P G C+ ICP F H L
Sbjct: 574 QGFWGSNCSMTC--SCQNGGSCSPEDGTCVCAPGYRGTSCKR-ICPPG---FYGHRCSQL 627
Query: 348 LLTGVHIT---HGRTLHYQ--VDLIRCTCRQV 374
VH T H T H + C QV
Sbjct: 628 CPQCVHSTGPCHHVTGHCECLAGFFGSLCNQV 659
Score = 59 (25.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C C IN C+C G CQ+ CP
Sbjct: 326 CQNGAKCYHINGACLCDTGFKGHHCQDRFCP 356
Score = 56 (24.8 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
C C I+ C C G CQ+ CP+ +E CD
Sbjct: 501 CANGAACDPIDGSCTCSSGWRGERCQQP-CPDGTYELECRERCD 543
Score = 54 (24.1 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C C I QC C +G CQEE CP
Sbjct: 283 CRNGGLCDHITGQCQCMAGYSGHRCQEE-CP 312
Score = 48 (22.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 14/39 (35%), Positives = 16/39 (41%)
Query: 301 CPDKCPENRT----C--INNQCVCPPRRTGPDCQEEICP 333
C CP N T C + +C C TG C E CP
Sbjct: 364 CDKYCPCNSTNTISCHPLTGECSCTAGWTGLYCNET-CP 401
Score = 42 (19.8 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDC 327
C +C I+ C+C G DC
Sbjct: 458 CHNQASCSPIDGSCICKEGWQGVDC 482
>WB|WBGene00001328 [details] [associations]
symbol:epi-1 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007414 "axonal
defasciculation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
[GO:0010950 "positive regulation of endopeptidase activity"
evidence=IMP] [GO:0051788 "response to misfolded protein"
evidence=IMP] InterPro:IPR010307 Pfam:PF06009 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0001764 GO:GO:0002119 GO:GO:0010171 GO:GO:0040017
GO:GO:0007155 GO:GO:0009408 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042127 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0040035 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0010950
GO:GO:0005604 GO:GO:0071711 GO:GO:0040027 Pfam:PF02210
GO:GO:0051788 EMBL:Z70286 UniGene:Cel.18380 GeneID:177956
KEGG:cel:CELE_K08C7.3 CTD:177956 GeneTree:ENSGT00700000104140
NextBio:899114 GO:GO:0007414 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 EMBL:AB001074
EMBL:AB016806 PIR:T37316 RefSeq:NP_001023281.1 HSSP:Q92956
ProteinModelPortal:G5EEV6 SMR:G5EEV6 PRIDE:G5EEV6
EnsemblMetazoa:K08C7.3a.1 EnsemblMetazoa:K08C7.3a.2
WormBase:K08C7.3a OMA:CHHALLD Uniprot:G5EEV6
Length = 3704
Score = 227 (85.0 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 66/198 (33%), Positives = 88/198 (44%)
Query: 43 CKGPPDY---SCQ-CELGWTGVDCS------VNCLCNNHS-TCVHGIGICDECHDWTTGD 91
C+ P Y SCQ C G+ V V C CN HS TC GIC +C T GD
Sbjct: 1797 CQCPAPYTGPSCQLCASGYHRVQSGSFLGACVPCECNGHSATCDPDTGICTDCEHNTNGD 1856
Query: 92 HCQYCRAGSYGNATTQE--GCRKCDCN-SHGNSVLGVCD-SITGE---CICQDNTQGKNC 144
HC++C G YGNAT C C C + N+ CD S G+ C C+ G C
Sbjct: 1857 HCEFCNEGHYGNATNGSPYDCMACACPFAPTNNFAKSCDVSEEGQLLQCNCKPGYTGDRC 1916
Query: 145 ERCLPGYYGDPT-DGGTCY-YQCMARGMLTGPGPQGLGSG---LAERNAWEGKDTPSREC 199
+RC G++G P G +C QC LT SG L E+N +G+ S C
Sbjct: 1917 DRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNT-DGRHCES--C 1973
Query: 200 L-WIIGQSLDSNSTAPAD 216
W G ++ + + + +
Sbjct: 1974 AAWFYGDAVTAKNCSSCE 1991
Score = 192 (72.6 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 54/174 (31%), Positives = 78/174 (44%)
Query: 43 CKGPPDYS---C-QCELGW------TGVDCSVNCLCNNHS------TCVHGIGICDECHD 86
C P Y+ C +C G+ +G CS C CN ++ +C G C C
Sbjct: 1905 CNCKPGYTGDRCDRCASGFFGHPQISGESCSP-CQCNGNNNLTDSRSCHPNSGDCYLCEQ 1963
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
T G HC+ C A YG+A T + C C+C+ G+ CD+ +G C C+ N +G +C+R
Sbjct: 1964 NTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQY---CDNKSGGCECKINVEGDSCDR 2020
Query: 147 CLPGYYG-DPTDG------GTCYY--QC-MARGMLT-GPGPQGLGSGLAERNAW 189
C P ++G G GT + QC + G T PG G+ E W
Sbjct: 2021 CKPDHWGFSKCQGCQGCHCGTAAFNTQCNVENGQCTCRPGATGMRCEHCEHGYW 2074
Score = 184 (69.8 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 39/120 (32%), Positives = 57/120 (47%)
Query: 41 GYCKGPPDY---SCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
G CK P C+ C G+ + C CN C G C C G C C
Sbjct: 1432 GQCKCKPGVIGRRCERCAPGYYNFPECIKCQCNAGQQCDERTGQCF-CPPHVEGQTCDRC 1490
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGYYGDP 155
+ ++G GC+KC C+ G+ VCD +G+C+C+++ G+ C+RCL G+YG P
Sbjct: 1491 VSNAFGYDPLI-GCQKCGCHPQGSEGGNLVCDPESGQCLCRESMGGRQCDRCLAGFYGFP 1549
Score = 184 (69.8 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 45/139 (32%), Positives = 66/139 (47%)
Query: 41 GYCKGPPDY---SC-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDE------CHDWTTG 90
G C+ P Y SC +C++G+ G DC C C+ T G G+CD+ C + G
Sbjct: 536 GQCECKPAYAGLSCDKCQVGYFGDDCKF-CNCDPMGT--EG-GVCDQTTGQCLCKEGFAG 591
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
D C C YG C+ C C+ G + CD+ +G+C C N G+ C++C G
Sbjct: 592 DKCDRCDIAFYG----YPNCKACACDGAGITS-PECDATSGQCPCNGNFTGRTCDKCAAG 646
Query: 151 YYGDPTDGGTCYYQCMARG 169
+Y P G C +C+ G
Sbjct: 647 FYNYPDCRG-C--ECLLSG 662
Score = 178 (67.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 38/111 (34%), Positives = 54/111 (48%)
Query: 51 CQ-CELGWTGVDCS-VNCLCN----NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNA 104
C+ C G+T V V C+C+ H C G C EC G C C+ G +G
Sbjct: 502 CETCADGYTNVTAGCVECVCDATGSEHGNCSASTGQC-ECKPAYAGLSCDKCQVGYFG-- 558
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
+ C+ C+C+ G GVCD TG+C+C++ G C+RC +YG P
Sbjct: 559 ---DDCKFCNCDPMGTEG-GVCDQTTGQCLCKEGFAGDKCDRCDIAFYGYP 605
Score = 171 (65.3 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 43/118 (36%), Positives = 57/118 (48%)
Query: 43 CKGPPDY--SCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
CK PD+ +C+ G G C ++ C G C C TG C++C G
Sbjct: 2021 CK--PDHWGFSKCQ-GCQGCHCGTAAF---NTQCNVENGQCT-CRPGATGMRCEHCEHG- 2072
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDG 158
Y N + GC KCDC + S+ VCD TG+C CQ+ G C++CLP Y PT G
Sbjct: 2073 YWNYG-EHGCDKCDCEAD-LSMGTVCDVRTGQCHCQEGATGSRCDQCLPSYLRIPTYG 2128
Score = 167 (63.8 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 39/123 (31%), Positives = 56/123 (45%)
Query: 42 YCKGPPDYS-C-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDE--------CHDWTTGD 91
YCKG + C +C+ + C CN G CD+ C TG
Sbjct: 675 YCKGNFEGERCDRCKPNFYNFPICEECNCNPSGVTRDFQG-CDKVSPGELCSCRKHVTGR 733
Query: 92 HCQYCRAGSYG-NATTQEGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQGKNCERCLP 149
C C+ + ++GCR CDCN +G S L CD TG+C+C+ N G+ C++C
Sbjct: 734 ICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCAD 793
Query: 150 GYY 152
G+Y
Sbjct: 794 GFY 796
Score = 157 (60.3 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 49/154 (31%), Positives = 68/154 (44%)
Query: 41 GYCKGPPDY---SC-QCELGWTGVDCSVNCLCNNHST----CVHGIGICDECHDWTTGDH 92
G C+ P + C QC G+ C CN + T C+ G C C G
Sbjct: 443 GKCECLPRFVGEDCDQCASGYYDAPKCKPCECNVNGTIGDVCLPEDGQCP-CKAGFGGTF 501
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ C G Y N T GC +C C++ G S G C + TG+C C+ G +C++C GY+
Sbjct: 502 CETCADG-YTNVTA--GCVECVCDATG-SEHGNCSASTGQCECKPAYAGLSCDKCQVGYF 557
Query: 153 GD--------P--TDGGTCYY---QCMARGMLTG 173
GD P T+GG C QC+ + G
Sbjct: 558 GDDCKFCNCDPMGTEGGVCDQTTGQCLCKEGFAG 591
Score = 144 (55.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 39/120 (32%), Positives = 53/120 (44%)
Query: 43 CK-GPPDYSC-QCELGWTGV-DCSVNCLCNNHST----CVHGIGICDECHDWTTGDHCQY 95
CK G C +C++ + G +C C C+ C G C C+ TG C
Sbjct: 585 CKEGFAGDKCDRCDIAFYGYPNCKA-CACDGAGITSPECDATSGQCP-CNGNFTGRTCDK 642
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C AG Y CR C+C G CDS G+C C+ N +G+ C+RC P +Y P
Sbjct: 643 CAAGFYN----YPDCRGCECLLSGAKGQ-TCDS-NGQCYCKGNFEGERCDRCKPNFYNFP 696
Score = 142 (55.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 35/113 (30%), Positives = 50/113 (44%)
Query: 43 CKGPPDYSCQC--ELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
CK P + Q E G DC+VN + +TC G C C G C C G
Sbjct: 738 CK-PTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQC-MCKKNADGRRCDQCADGF 795
Query: 101 YG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
Y N+ Q GC C C+ G ++ CD +G+C C+ G C++ + +Y
Sbjct: 796 YRLNSYNQMGCESCHCDI-GGALRAECDITSGQCKCRPRVTGLRCDQPIENHY 847
Score = 138 (53.6 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYG--NATTQEG--CRKCDCNSHGNSVLGVCDSITGE 132
G G+C C + T G +C C G + T E C+ CDC+ ++ G C TG+
Sbjct: 387 GGGVCKNCRENTEGVNCNKCSFGYFRPEGVTWNEPQPCKVCDCDPDKHT--GACAEETGK 444
Query: 133 CICQDNTQGKNCERCLPGYYGDP 155
C C G++C++C GYY P
Sbjct: 445 CECLPRFVGEDCDQCASGYYDAP 467
Score = 136 (52.9 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 39/120 (32%), Positives = 55/120 (45%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVD-CSVNCLCN--NHS-TCVHGIGICDECHDWTTGD 91
NKC +GY + P+ + W C V C C+ H+ C G C EC G+
Sbjct: 404 NKCSFGYFR--PE-----GVTWNEPQPCKV-CDCDPDKHTGACAEETGKC-ECLPRFVGE 454
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
C C +G Y +A C+ C+CN +G ++ VC G+C C+ G CE C GY
Sbjct: 455 DCDQCASGYY-DAPK---CKPCECNVNG-TIGDVCLPEDGQCPCKAGFGGTFCETCADGY 509
Score = 130 (50.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 37/124 (29%), Positives = 49/124 (39%)
Query: 41 GYCKGPPDY---SC-QCELGWTGVDCSVNCL-CNNHSTCVHGIG-ICDE------CHDWT 88
G C PP +C +C G D + C C H G +CD C +
Sbjct: 1474 GQCFCPPHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRESM 1533
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL 148
G C C AG YG C C CN G + +CD+ +C C++N G CE C
Sbjct: 1534 GGRQCDRCLAGFYGFPH----CYGCSCNRAGTTE-EICDATNAQCKCKENVYGGRCEACK 1588
Query: 149 PGYY 152
G +
Sbjct: 1589 AGTF 1592
Score = 59 (25.8 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 315 QCVCPPRRTGPDCQEEICPNECH 337
QC CP TGP CQ +C + H
Sbjct: 1796 QCQCPAPYTGPSCQ--LCASGYH 1816
Score = 51 (23.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEF 339
+ QC C PR TG C + P E H F
Sbjct: 825 SGQCKCRPRVTGLRCDQ---PIENHYF 848
Score = 49 (22.3 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 273 EAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINN--QCVCPPRRTGPDC 327
+ K GV+ ++ P G+ + C +C + C QC CPP G C
Sbjct: 1435 KCKPGVIGRRCERCAP--GYYNFPECIKC--QCNAGQQCDERTGQCFCPPHVEGQTC 1487
Score = 43 (20.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 292 FNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQ 328
FNA C + E+ C QC C P G C+
Sbjct: 1408 FNAAALSCDCVAQGSESFQCEQYGGQCKCKPGVIGRRCE 1446
Score = 40 (19.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 316 CVCPPRR-TGPDCQEEI--CPNECHEFLNHGTCDLLLTGVH 353
C C T P+C CP C+ TCD G +
Sbjct: 610 CACDGAGITSPECDATSGQCP--CNGNFTGRTCDKCAAGFY 648
Score = 39 (18.8 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 315 QCVCPPRRTGPDC 327
QC C P TG C
Sbjct: 1904 QCNCKPGYTGDRC 1916
Score = 39 (18.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 308 NRTCINNQCVCPPRRTGPDCQE 329
N + QC C P G C +
Sbjct: 530 NCSASTGQCECKPAYAGLSCDK 551
>WB|WBGene00016913 [details] [associations]
symbol:lam-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] GO:GO:0008340 GO:GO:0009792 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 EMBL:FO080795
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 PIR:T28811 RefSeq:NP_509204.3
IntAct:Q18823 MINT:MINT-118164 STRING:Q18823 PaxDb:Q18823
EnsemblMetazoa:C54D1.5.1 EnsemblMetazoa:C54D1.5.2 GeneID:180980
KEGG:cel:CELE_C54D1.5 UCSC:C54D1.5 CTD:180980 WormBase:C54D1.5
eggNOG:NOG235720 GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
InParanoid:Q18823 OMA:DRCKENK NextBio:911826 Uniprot:Q18823
Length = 1633
Score = 217 (81.4 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 52/121 (42%), Positives = 59/121 (48%)
Query: 58 TGVDCSVNCLCNNHSTCV-HGIG--ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCD 114
T DC C C N C+ H G IC EC + TG C C G +GN C +C
Sbjct: 778 TEEDCQ-KCPCPNDGPCILHADGDVICTECPNGYTGRRCDECSDGYFGNPKDGTECVECA 836
Query: 115 C--NSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPT--DGGTCYY-QCMAR 168
C N+ NS+ G CD ITGEC C NT G NCE C PGY+GD G C C A
Sbjct: 837 CSGNTDPNSI-GNCDKITGECKKCIFNTHGFNCENCKPGYWGDALIEPKGNCQSCGCFAA 895
Query: 169 G 169
G
Sbjct: 896 G 896
Score = 196 (74.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGN 120
+ C C+NHS +C G C C T GD C+ C G YG+A T+E C+KC C + G
Sbjct: 734 IKCDCHNHSNSCEAESGSCI-CEHNTAGDTCERCARGYYGDALQGTEEDCQKCPCPNDGP 792
Query: 121 SVLGVC-DSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQG 178
+L D I EC + G+ C+ C GY+G+P DG C +C G T P G
Sbjct: 793 CILHADGDVICTEC--PNGYTGRRCDECSDGYFGNPKDGTECV-ECACSGN-TDPNSIG 847
Score = 172 (65.6 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 34/80 (42%), Positives = 43/80 (53%)
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDN 138
EC G C+ C +G + T G C KCDC++H NS C++ +G CIC+ N
Sbjct: 703 ECLPGFVGQFCESCESG-FRRETKFGGPFNHCIKCDCHNHSNS----CEAESGSCICEHN 757
Query: 139 TQGKNCERCLPGYYGDPTDG 158
T G CERC GYYGD G
Sbjct: 758 TAGDTCERCARGYYGDALQG 777
Score = 165 (63.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 42/124 (33%), Positives = 59/124 (47%)
Query: 43 CKGPPD-YSC-QCELG-WT--GVDCSVNCLCN---NHSTCVHGIGICDECHDWTTGDHCQ 94
C+G C QC W G + V C CN + ST G C +C TG C
Sbjct: 375 CQGNTQGVHCEQCIANHWRRPGENYCVACGCNEIGSLSTQCDNEGKC-QCKPGVTGRFCD 433
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C G Y +T GC+ C C + G+ + CDS +G C C+ N +G+ C++C PGY+
Sbjct: 434 QCLDGFYDFSTN--GCKNCGCETSGSLNNQPRCDSSSGSCSCKLNVEGRQCDKCKPGYFD 491
Query: 154 DPTD 157
T+
Sbjct: 492 LSTE 495
Score = 161 (61.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 40/124 (32%), Positives = 59/124 (47%)
Query: 41 GYCKGPPDY---SC-QCELGW----TGVDCS-VNC--LCNNHSTCVHGIGICDECHDWTT 89
G C P+ C QC G+ +G+ C NC L + +TC G C +C T
Sbjct: 914 GQCDCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNTCDVNTGQC-QCKPGVT 972
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
G C C +G + GC+ CDC G S CD +G+C+C++N +G+ C++C
Sbjct: 973 GQRCDRCADYHFGFSAN--GCQPCDCEYIG-SENQQCDVNSGQCLCKENVEGRRCDQCAE 1029
Query: 150 GYYG 153
YG
Sbjct: 1030 NRYG 1033
Score = 142 (55.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 30/83 (36%), Positives = 43/83 (51%)
Query: 76 HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECIC 135
HG G C +C T G HC+ C A + + C C CN G S+ CD+ G+C C
Sbjct: 368 HG-GHCIDCQGNTQGVHCEQCIANHW-RRPGENYCVACGCNEIG-SLSTQCDN-EGKCQC 423
Query: 136 QDNTQGKNCERCLPGYYGDPTDG 158
+ G+ C++CL G+Y T+G
Sbjct: 424 KPGVTGRFCDQCLDGFYDFSTNG 446
Score = 142 (55.0 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 69 NNHST---CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGV 125
NN T C G CD C G C C G Y N T+ GC++C+C+ G+
Sbjct: 901 NNDYTLLECNQQDGQCD-CLPNVIGIQCDQCAHGFY-NITSGLGCQECNCDPLGSEG-NT 957
Query: 126 CDSITGECICQDNTQGKNCERCLPGYYGDPTDG 158
CD TG+C C+ G+ C+RC ++G +G
Sbjct: 958 CDVNTGQCQCKPGVTGQRCDRCADYHFGFSANG 990
Score = 53 (23.7 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 17/51 (33%), Positives = 21/51 (41%)
Query: 300 SCPDKCPENRTC-INN-QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CD 346
+C E TC +N QC C P TG C C + F +G CD
Sbjct: 947 NCDPLGSEGNTCDVNTGQCQCKPGVTGQRCDR--CADYHFGFSANGCQPCD 995
Score = 43 (20.2 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 323 TGPDCQEEICPNECHEFLNHGTCDLLLT 350
T DCQ+ CPN+ L H D++ T
Sbjct: 778 TEEDCQKCPCPNDGPCIL-HADGDVICT 804
Score = 38 (18.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 303 DKCPENRTCINNQCV 317
D+C ENR I C+
Sbjct: 1025 DQCAENRYGITQGCL 1039
Score = 37 (18.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEFLN 341
+ QC C P G C + C H F N
Sbjct: 913 DGQCDCLPNVIGIQCDQ--C---AHGFYN 936
>MGI|MGI:1920951 [details] [associations]
symbol:Megf11 "multiple EGF-like-domains 11" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0010842 "retina layer formation"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IDA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
MGI:MGI:1920951 GO:GO:0016021 GO:GO:0016323 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 GO:GO:0010842 GO:GO:0034109
HOGENOM:HOG000294130 Pfam:PF12661 GeneTree:ENSGT00690000101691
HSSP:P01132 HOVERGEN:HBG108333 OrthoDB:EOG42JNQJ CTD:84465
EMBL:AK122555 EMBL:AK048840 EMBL:AK051642 EMBL:AK160406
IPI:IPI00654415 IPI:IPI00752960 IPI:IPI00756127 IPI:IPI00986520
RefSeq:NP_001127871.1 RefSeq:NP_766110.3 UniGene:Mm.127721
UniGene:Mm.405602 ProteinModelPortal:Q80T91 SMR:Q80T91
STRING:Q80T91 PhosphoSite:Q80T91 PRIDE:Q80T91
Ensembl:ENSMUST00000068967 Ensembl:ENSMUST00000093829
Ensembl:ENSMUST00000118485 GeneID:214058 KEGG:mmu:214058
UCSC:uc009qby.2 UCSC:uc009qbz.2 UCSC:uc009qca.2 InParanoid:Q80T91
NextBio:374170 Bgee:Q80T91 CleanEx:MM_MEGF11 Genevestigator:Q80T91
Uniprot:Q80T91
Length = 1091
Score = 191 (72.3 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 55/158 (34%), Positives = 72/158 (45%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGI--- 78
F LC +C++G C P +C CE GW G DCS C C+N C +G
Sbjct: 97 FCIPLCTEECMHGRCVSPD--TCHCEPGWGGPDCSSGCDSEHWGPHCSNRCQCQNGALCN 154
Query: 79 ---GICDECHDWTTGDHCQ-YCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGEC 133
G C C G C+ C G++G +GC+ C C+ HG S CD TGEC
Sbjct: 155 PITGAC-VCAPGFRGWRCEELCAPGTHG-----KGCQLLCQCH-HGAS----CDPRTGEC 203
Query: 134 ICQDNTQGKNCER-CLPGYYGD------PT-DGGTCYY 163
+C G CE C PG +G P +GGTC++
Sbjct: 204 LCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHH 241
Score = 168 (64.2 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 48/146 (32%), Positives = 63/146 (43%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGI----- 78
+S+C C G P D SC C GW G+DCS+ C CN C +G
Sbjct: 446 SSVC--SCSNGGTCSPVDGSCTCREGWQGLDCSLPCPSGTWGLNCNETCICANGAACSPF 503
Query: 79 -GICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
G C W GD C+ C G++G ++ CDC SH + CD +TG C C
Sbjct: 504 DGSCACTPGWL-GDSCELPCPDGTFGLNCSEH----CDC-SHADG----CDPVTGHCCCL 553
Query: 137 DNTQGKNCER-CLPGYYGDPTDGGTC 161
G C+ C PG +G P +C
Sbjct: 554 AGWTGIRCDSTCPPGRWG-PNCSVSC 578
Score = 168 (64.2 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 51/140 (36%), Positives = 63/140 (45%)
Query: 31 ASLCYNKCIY-GYCKGPPDYSCQCELGWTGVDCSV-------------NCLCNNHSTCVH 76
A LC C G C P D SCQC GW G DCS C C+N ++C
Sbjct: 663 AQLC--SCANNGTCS-PIDGSCQCFPGWIGKDCSQACPSGFWGSACFHTCSCHNGASCSA 719
Query: 77 GIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECI 134
G C WT G C Q C + +G + C C C + G S CD ITG+C
Sbjct: 720 EDGACHCTPGWT-GLFCTQRCPSAFFG-----KDCGHICQCQN-GAS----CDHITGKCT 768
Query: 135 CQDNTQGKNCE-RCLPGYYG 153
C+ G++CE RC PG +G
Sbjct: 769 CRTGFSGRHCEQRCAPGTFG 788
Score = 164 (62.8 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 47/135 (34%), Positives = 59/135 (43%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-Q 94
G C P Y+ C+ C G G C + C C N TC H G C C TG C Q
Sbjct: 201 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGEC-ACPPGWTGAVCAQ 259
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYG 153
C G++G +Q+ C C+ HG G CD +TG+C C G C E C G +G
Sbjct: 260 PCPPGTFGQNCSQD----CPCH-HG----GQCDHVTGQCHCTAGYMGDRCQEECPFGTFG 310
Query: 154 -------DPTDGGTC 161
D +GG C
Sbjct: 311 FLCSQRCDCHNGGQC 325
Score = 162 (62.1 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 56/165 (33%), Positives = 71/165 (43%)
Query: 37 KCIYGYCKGPPDYSCQ---CELGWTGVDCSVNCLCNNHSTC-VHGI-GICDECHDWTTGD 91
+C GY KGP SCQ C G G C++ C C+ +T H + G C C +G
Sbjct: 333 ECEPGY-KGP---SCQERLCPEGLHGPGCTLPCPCDTENTISCHPVTGACT-CQPGWSGH 387
Query: 92 HC-QYCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCL 148
+C + C AG YGN GC+ C C + + C SITG C C G+ C C
Sbjct: 388 YCNESCPAGYYGN-----GCQLPCTCQNGAD-----CHSITGSCTCAPGFMGEVCAVPCA 437
Query: 149 PGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKD 193
G YG P C C + G P GS R W+G D
Sbjct: 438 AGTYG-PNCSSVC--SC-SNGGTCSPVD---GSCTC-REGWQGLD 474
Score = 157 (60.3 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 41/135 (30%), Positives = 59/135 (43%)
Query: 29 FNASLCYNKCIY--GYCKGPPDYSCQCELGWTGV-------------DCSVNCLCNNHST 73
F S C++ C G D +C C GWTG+ DC C C N ++
Sbjct: 700 FWGSACFHTCSCHNGASCSAEDGACHCTPGWTGLFCTQRCPSAFFGKDCGHICQCQNGAS 759
Query: 74 CVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITG 131
C H G C C +G HC Q C G++G GC++ C+C ++ CD +TG
Sbjct: 760 CDHITGKCT-CRTGFSGRHCEQRCAPGTFGY-----GCQQLCECMNNAT-----CDHVTG 808
Query: 132 ECICQDNTQGKNCER 146
C C +G C++
Sbjct: 809 TCYCSPGFKGIRCDQ 823
Score = 156 (60.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 43/125 (34%), Positives = 52/125 (41%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C Y CQ C G G CS C C+N C G C EC G C
Sbjct: 285 VTGQCHCTAGYMGDRCQEECPFGTFGFLCSQRCDCHNGGQCSPATGAC-ECEPGYKGPSC 343
Query: 94 Q--YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLP 149
Q C G +G GC C C++ N++ C +TG C CQ G C E C
Sbjct: 344 QERLCPEGLHG-----PGCTLPCPCDTE-NTIS--CHPVTGACTCQPGWSGHYCNESCPA 395
Query: 150 GYYGD 154
GYYG+
Sbjct: 396 GYYGN 400
Score = 146 (56.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 48/145 (33%), Positives = 61/145 (42%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDH 92
+ G C P +S C C G+ G C + C C N + C H I G C C G+
Sbjct: 374 VTGACTCQPGWSGHYCNESCPAGYYGNGCQLPCTCQNGADC-HSITGSCT-CAPGFMGEV 431
Query: 93 CQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
C C AG+YG C C C S+G G C + G C C++ QG +C LP
Sbjct: 432 CAVPCAAGTYG-----PNCSSVCSC-SNG----GTCSPVDGSCTCREGWQGLDCS--LPC 479
Query: 151 YYGDPTDGGTCYYQCM-ARGMLTGP 174
G T G C C+ A G P
Sbjct: 480 PSG--TWGLNCNETCICANGAACSP 502
Score = 138 (53.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 43/137 (31%), Positives = 53/137 (38%)
Query: 34 CYNKCIYGYCKG--PPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVHGI 78
C C + G P C C GWTG+ +CSV+C C N +C
Sbjct: 531 CSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTCPPGRWGPNCSVSCSCENGGSCSPED 590
Query: 79 GICDECHDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C EC G CQ C G YG+ Q C C H G C I+G C C
Sbjct: 591 GSC-ECAPGFRGPLCQRICPPGFYGHGCAQP-CPLC---VHSR---GPCHHISGICECLP 642
Query: 138 NTQGKNCER-CLPGYYG 153
G C + C G++G
Sbjct: 643 GFSGALCNQVCAGGHFG 659
Score = 131 (51.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 45/147 (30%), Positives = 62/147 (42%)
Query: 26 LYIFNASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGI 80
L + + C++ I G C+ P +S C C G G DC+ C C N+ TC G
Sbjct: 623 LCVHSRGPCHH--ISGICECLPGFSGALCNQVCAGGHFGQDCAQLCSCANNGTCSPIDGS 680
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQDNT 139
C W D Q C +G +G+A C C C++ G S C + G C C
Sbjct: 681 CQCFPGWIGKDCSQACPSGFWGSA-----CFHTCSCHN-GAS----CSAEDGACHCTPGW 730
Query: 140 QGKNC-ERCLPGYYGDPTDGGTCYYQC 165
G C +RC ++G G C QC
Sbjct: 731 TGLFCTQRCPSAFFGKDC-GHIC--QC 754
Score = 130 (50.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 50/158 (31%), Positives = 66/158 (41%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC N I G C P + C+ C G G C + C C++ ++C G C C
Sbjct: 149 NGALC-NP-ITGACVCAPGFRGWRCEELCAPGTHGKGCQLLCQCHHGASCDPRTGEC-LC 205
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
TG +C+ C GS+G C +C C + G G C ITGEC C G
Sbjct: 206 APGYTGVYCEELCPPGSHG-----AHCELRCPCQN-G----GTCHHITGECACPPGWTGA 255
Query: 143 NCER-CLPGYYGD------PTD-GGTCYY-----QCMA 167
C + C PG +G P GG C + C A
Sbjct: 256 VCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTA 293
Score = 117 (46.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 42/143 (29%), Positives = 56/143 (39%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N + C++ I G C P + C C G G +CS C C+N TC G C C
Sbjct: 410 NGADCHS--ITGSCTCAPGFMGEVCAVPCAAGTYGPNCSSVCSCSNGGTCSPVDGSCT-C 466
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
+ G C C +G++G C + C C ++G C G C C G
Sbjct: 467 REGWQGLDCSLPCPSGTWGL-----NCNETCIC-ANG----AACSPFDGSCACTPGWLGD 516
Query: 143 NCERCLPGYYGDPTDGGTCYYQC 165
+CE P D T G C C
Sbjct: 517 SCELPCP----DGTFGLNCSEHC 535
Score = 115 (45.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 55/198 (27%), Positives = 76/198 (38%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDHCQY-CRAGSYG-NATTQEG 109
C G+ G C + C C N + C H I G C C G+ C C AG+YG N ++
Sbjct: 393 CPAGYYGNGCQLPCTCQNGADC-HSITGSCT-CAPGFMGEVCAVPCAAGTYGPNCSSVCS 450
Query: 110 CRKCD-CNSHGNSVLGVC-DSITG-ECI--CQDNTQGKNCER---CLPGYYGDPTDGGTC 161
C C+ S C + G +C C T G NC C G P DG
Sbjct: 451 CSNGGTCSPVDGSC--TCREGWQGLDCSLPCPSGTWGLNCNETCICANGAACSPFDGSCA 508
Query: 162 YYQCMARGMLTGPGPQG-LGSGLAER---NAWEGKDTPSRECLWIIGQS-LDSNSTAPAD 216
P P G G +E + +G D + C + G + + +ST P
Sbjct: 509 CTPGWLGDSCELPCPDGTFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTCPPG 568
Query: 217 IILLRLQPDINVPCN-EN 233
R P+ +V C+ EN
Sbjct: 569 ----RWGPNCSVSCSCEN 582
Score = 76 (31.8 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 299 FSCPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEICPNECH 337
F C +C C C C P GP CQE +CP H
Sbjct: 311 FLCSQRCDCHNGGQCSPATGACECEPGYKGPSCQERLCPEGLH 353
Score = 76 (31.8 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 23/67 (34%), Positives = 28/67 (41%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP-----NECHEFL--NHG-TCDLLLT 350
CP C TC I +C CPP TG C + CP C + +HG CD +
Sbjct: 231 CP--CQNGGTCHHITGECACPPGWTGAVCAQP-CPPGTFGQNCSQDCPCHHGGQCDHVTG 287
Query: 351 GVHITHG 357
H T G
Sbjct: 288 QCHCTAG 294
Score = 67 (28.6 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 18/51 (35%), Positives = 20/51 (39%)
Query: 300 SCPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+C CP C + QC C G CQEE CP FL CD
Sbjct: 269 NCSQDCPCHHGGQCDHVTGQCHCTAGYMGDRCQEE-CPFGTFGFLCSQRCD 318
Score = 62 (26.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
C N TC I+ C C P G DC + CP+
Sbjct: 668 CANNGTCSPIDGSCQCFPGWIGKDCSQA-CPS 698
Score = 59 (25.8 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 22/72 (30%), Positives = 27/72 (37%)
Query: 300 SCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHG 357
SC C +C + C C P GP CQ ICP F HG VH + G
Sbjct: 577 SC--SCENGGSCSPEDGSCECAPGFRGPLCQR-ICPPG---FYGHGCAQPCPLCVH-SRG 629
Query: 358 RTLHYQVDLIRC 369
H+ + C
Sbjct: 630 -PCHHISGICEC 640
Score = 58 (25.5 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 21/88 (23%), Positives = 31/88 (35%)
Query: 256 TLGVFCTE--DMHRGYE------VLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPE 307
T G C++ D H G + E + G ++ EG + CP
Sbjct: 308 TFGFLCSQRCDCHNGGQCSPATGACECEPGYKGPSCQERLCPEGLHGPGCTLPCPCDTEN 367
Query: 308 NRTC--INNQCVCPPRRTGPDCQEEICP 333
+C + C C P +G C E CP
Sbjct: 368 TISCHPVTGACTCQPGWSGHYCNES-CP 394
Score = 57 (25.1 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNE----CH---EFLNHGTCD 346
+C +C I +C C +G C++ P C E +N+ TCD
Sbjct: 753 QCQNGASCDHITGKCTCRTGFSGRHCEQRCAPGTFGYGCQQLCECMNNATCD 804
Score = 55 (24.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPNECHEFLNHGTCD 346
C T I CPP R GP+C C N G+C+
Sbjct: 552 CLAGWTGIRCDSTCPPGRWGPNCSVSCSCENGGSCSPEDGSCE 594
Score = 45 (20.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
C C + C C P G C E CP+
Sbjct: 494 CANGAACSPFDGSCACTPGWLGDSC-ELPCPD 524
>UNIPROTKB|D4AA94 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
OrthoDB:EOG4CZBF1 IPI:IPI00776570 ProteinModelPortal:D4AA94
Ensembl:ENSRNOT00000055386 Uniprot:D4AA94
Length = 1193
Score = 181 (68.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 39/108 (36%), Positives = 53/108 (49%)
Query: 51 CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQ 107
CQ C GW G C + C C N C G C WT G CQ C +G +G
Sbjct: 708 CQDTCSAGWYGTGCQIRCACANDGHCDPTTGRCSCAPGWT-GLSCQRACDSGHWG----P 762
Query: 108 EGCRKCDCNS-HGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ C+C++ HGN CD+++G C+C+ +G CE+ C GYYG
Sbjct: 763 DCIHPCNCSAGHGN-----CDAVSGLCLCEAGYEGPRCEQSCRQGYYG 805
Score = 172 (65.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 44/127 (34%), Positives = 59/127 (46%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
+ LC C GY +GP C+ C G+ G C C C + + C H G C W
Sbjct: 781 SGLCL--CEAGY-EGP---RCEQSCRQGYYGPSCEQKCRCEHGAACDHVSGACTCPAGWR 834
Query: 89 TGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNC-E 145
G C++ C AG +G DC+S N G CD++TG CIC G C +
Sbjct: 835 -GSFCEHACPAGFFG----------LDCDSACNCSAGAPCDAVTGSCICPAGRWGPRCAQ 883
Query: 146 RCLPGYY 152
+CLPG+Y
Sbjct: 884 KCLPGHY 890
Score = 162 (62.1 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 47/136 (34%), Positives = 60/136 (44%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-Q 94
G+C P ++ CQ C GW G C+ CLC +++C H G C C TG C Q
Sbjct: 911 GHCLCPAGWTGDKCQSSCPRGWFGEACAQRCLCPPNASCHHVTGEC-RCPPGFTGLSCEQ 969
Query: 95 YCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GYY 152
C +G YG GC C C +G G CD TG C C G +C P G +
Sbjct: 970 GCPSGRYG-----PGCEHICKC-LNG----GTCDPATGACYCPAGFLGADCSLACPQGRF 1019
Query: 153 GDPTDGGTCYYQCMAR 168
G P+ C + C R
Sbjct: 1020 G-PS----CAHVCACR 1030
Score = 160 (61.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 47/135 (34%), Positives = 57/135 (42%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHC- 93
G C P + SCQ C+ G G DC C C+ H C G+C C G C
Sbjct: 738 GRCSCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLC-LCEAGYEGPRCE 796
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GYY 152
Q CR G YG + Q KC C HG CD ++G C C +G CE P G++
Sbjct: 797 QSCRQGYYGPSCEQ----KCRCE-HG----AACDHVSGACTCPAGWRGSFCEHACPAGFF 847
Query: 153 GDPTDGGTCYYQCMA 167
G D C C A
Sbjct: 848 GLDCDSA-C--NCSA 859
Score = 151 (58.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 43/140 (30%), Positives = 56/140 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVH 76
+ SL + C G P C C GWTG+ +CS C C N TC
Sbjct: 414 DCSLTCDDCRNGGTCFPGQDGCDCPEGWTGIICNETCPPDTFGKNCSSPCTCQNGGTCDP 473
Query: 77 GIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECI 134
+G C C +G HC+ C G YG + CRK C C + G C + G C+
Sbjct: 474 VLGAC-RCPPGVSGAHCEDGCPKGFYG-----KHCRKKCHCANRGR-----CHRLYGACL 522
Query: 135 CQDNTQGKNCE-RCLPGYYG 153
C G+ C C P +G
Sbjct: 523 CDPGLYGRFCHLACPPWAFG 542
Score = 149 (57.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 46/134 (34%), Positives = 58/134 (43%)
Query: 50 SCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDE------CHDWTTGDHCQY- 95
SC C G G C+ CL C + +C+HG GICD C TGD CQ
Sbjct: 869 SCICPAGRWGPRCAQKCLPGHYAAGCQLNCSCLHG-GICDRLTGHCLCPAGWTGDKCQSS 927
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYGD 154
C G +G A Q +C C + + C +TGEC C G +CE+ C G YG
Sbjct: 928 CPRGWFGEACAQ----RCLCPPNAS-----CHHVTGECRCPPGFTGLSCEQGCPSGRYGP 978
Query: 155 PTD-------GGTC 161
+ GGTC
Sbjct: 979 GCEHICKCLNGGTC 992
Score = 148 (57.2 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 41/136 (30%), Positives = 58/136 (42%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C P + C+ C G+ G+DC C C+ + C G C C G C
Sbjct: 823 VSGACTCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPCDAVTGSCI-CPAGRWGPRC 881
Query: 94 -QYCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-G 150
Q C G Y GC+ C C HG G+CD +TG C+C G C+ P G
Sbjct: 882 AQKCLPGHYA-----AGCQLNCSC-LHG----GICDRLTGHCLCPAGWTGDKCQSSCPRG 931
Query: 151 YYGDPTDGGTCYYQCM 166
++G+ C +C+
Sbjct: 932 WFGE-----ACAQRCL 942
Score = 140 (54.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 37/115 (32%), Positives = 48/115 (41%)
Query: 39 IYGYCK-GPPDYSCQCELGWT----GVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C P +CE G G C + C C N C G C W G HC
Sbjct: 1038 VSGACICSPGKTGVRCEHGCPQDRFGKGCELKCACRNGGLCHATNGSCSCPLGWM-GPHC 1096
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
++ C AG YG A E C C ++G+ C+ TG C+C G+ CE C
Sbjct: 1097 EHACPAGRYGAACLLE----CFCQNNGS-----CEPTTGACLCGPGFYGQACEHC 1142
Score = 139 (54.0 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 40/124 (32%), Positives = 53/124 (42%)
Query: 39 IYGYCKGPP-----DYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDH 92
+ G C PP D C G G+ C C C + ++C G C C G
Sbjct: 649 VTGECLCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTC-LCLPGFVGSR 707
Query: 93 CQ-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLP 149
CQ C AG YG GC+ +C C + G+ CD TG C C G +C+R C
Sbjct: 708 CQDTCSAGWYGT-----GCQIRCACANDGH-----CDPTTGRCSCAPGWTGLSCQRACDS 757
Query: 150 GYYG 153
G++G
Sbjct: 758 GHWG 761
Score = 136 (52.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 43/148 (29%), Positives = 58/148 (39%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGIGICDE------ 83
KC+ G P +C C G+ G DCS+ C C + C G CD
Sbjct: 985 KCLNGGTCDPATGACYCPAGFLGADCSLACPQGRFGPSCAHVCACRQGAA-CDPVSGACI 1043
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQG 141
C TG C++ C +G +GC KC C + G G+C + G C C G
Sbjct: 1044 CSPGKTGVRCEHGCPQDRFG-----KGCELKCACRN-G----GLCHATNGSCSCPLGWMG 1093
Query: 142 KNCERCLP-GYYGDPTDGGTCYYQCMAR 168
+CE P G YG C +C +
Sbjct: 1094 PHCEHACPAGRYG-----AACLLECFCQ 1116
Score = 134 (52.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 36/128 (28%), Positives = 54/128 (42%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N LC+ G C P + C+ C G G C + C C N+ +C G C C
Sbjct: 1074 NGGLCH--ATNGSCSCPLGWMGPHCEHACPAGRYGAACLLECFCQNNGSCEPTTGAC-LC 1130
Query: 85 HDWTTGDHCQYCRAG-----SYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDN 138
G C++C G S + GC++ C+C G CD ++G+C+C
Sbjct: 1131 GPGFYGQACEHCEWGCPLPLSCPSGFHGPGCQRVCECQQ-G----APCDPVSGQCLCPAG 1185
Query: 139 TQGKNCER 146
G+ CE+
Sbjct: 1186 FHGQFCEK 1193
Score = 132 (51.5 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 42/144 (29%), Positives = 62/144 (43%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C+ PP S C+ C G+ G C C C N C G C C G C
Sbjct: 474 VLGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHCANRGRCHRLYGAC-LCDPGLYGRFC 532
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGY 151
C ++G +++ C C+ SH S C+ G C C+ QG+ C+ C G+
Sbjct: 533 HLACPPWAFGPGCSED-CL-CE-QSHTRS----CNPKDGSCSCKAGFQGERCQAECESGF 585
Query: 152 YGDPTDGGTCYYQCMAR-GMLTGP 174
+G P G C ++C + G+ P
Sbjct: 586 FG-P--G--CRHRCTCQPGVACDP 604
Score = 127 (49.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 35/119 (29%), Positives = 49/119 (41%)
Query: 46 PPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTTGDHCQYCRA 98
P D SC C+ G+ G C C C + TC G+ CD +G+ C
Sbjct: 561 PKDGSCSCKAGFQGERCQAECESGFFGPGCRHRCTCQPGVA-CDP----VSGECRTQCPP 615
Query: 99 GSYGNATTQE---GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
G G QE G +C+ + V C +TGEC+C G++C C G +G
Sbjct: 616 GYQGEDCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGADCPEGRWG 674
Score = 110 (43.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 45/143 (31%), Positives = 53/143 (37%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
CI + P + +C G C +NC C + C G C C TGD CQ C
Sbjct: 870 CICPAGRWGPRCAQKCLPGHYAAGCQLNCSCLHGGICDRLTGHC-LCPAGWTGDKCQSSC 928
Query: 97 RAGSYGNATTQEG-CR-KCDCNSHGNSVLGVCDSITG-ECI--CQDNTQGKNCE---RCL 148
G +G A Q C C+ H TG C C G CE +CL
Sbjct: 929 PRGWFGEACAQRCLCPPNASCH-HVTGECRCPPGFTGLSCEQGCPSGRYGPGCEHICKCL 987
Query: 149 PGYYGDPTDGGTCYYQCMARGML 171
G DP G CY C A G L
Sbjct: 988 NGGTCDPATGA-CY--CPA-GFL 1006
Score = 95 (38.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 36/123 (29%), Positives = 49/123 (39%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGIC-DECHDWTTGDHC-QYCRAGSYG-NATTQE 108
+CE G+ G C C C C G C +C G+ C Q C G++G N +
Sbjct: 580 ECESGFFGPGCRHRCTCQPGVACDPVSGECRTQCPPGYQGEDCGQECPVGTFGVNCSGSC 639
Query: 109 GCRKCDCNSHGNSVLGVC---DSITGE-C--ICQDNTQGKNCERCLPGY-YG---DPTDG 158
C C+ V G C TGE C C + G C+ P +G +P +
Sbjct: 640 SCVGAPCHR----VTGECLCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGASCNP-ET 694
Query: 159 GTC 161
GTC
Sbjct: 695 GTC 697
Score = 88 (36.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 33/121 (27%), Positives = 45/121 (37%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICD-ECHDWTTGDH 92
C ++C+ P Y C+C+ G+ CL S+C G G C +C T H
Sbjct: 66 CQHRCV----NTPGSYLCECKPGFRLHTDGRTCLAI--SSCTLGNGGCQHQCVQLTVTQH 119
Query: 93 -CQYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITG--ECICQDNTQ----GKNC 144
CQ CR Y C R+ C + +C + G C C Q K C
Sbjct: 120 RCQ-CRP-QYQLQEDGRRCVRRSPCAEGNGGCMHICQELRGLAHCGCHPGYQLAADRKTC 177
Query: 145 E 145
E
Sbjct: 178 E 178
Score = 87 (35.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 21/52 (40%), Positives = 26/52 (50%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE-----CHEF---LNHGTCD 346
CP N +C + +C CPP TG C E+ CP+ C LN GTCD
Sbjct: 943 CPPNASCHHVTGECRCPPGFTGLSC-EQGCPSGRYGPGCEHICKCLNGGTCD 993
Score = 78 (32.5 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 24/81 (29%), Positives = 30/81 (37%)
Query: 34 CYNK-CIYGYCKGPPD-YSCQCELGWT-GVDCSVNCLCNNHSTCVHGIGICDE-CHDWTT 89
C N C C P Y C C G+ D C C + C G G C+ C +
Sbjct: 270 CANSPCCQQACANTPGGYECSCFAGYRLNTD---GCGCEDVDECASGHGGCEHHCSNLAG 326
Query: 90 GDHCQYCRAGSYGNATTQEGC 110
C +C AG Y + GC
Sbjct: 327 SFQC-FCEAG-YRLDEDRRGC 345
Score = 70 (29.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 300 SCPDKCP-ENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C C C + +C+CPP +TG DC + CP
Sbjct: 634 NCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGAD-CP 669
Score = 67 (28.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 18/56 (32%), Positives = 23/56 (41%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE----CH---EFLNHGTCDLLLTG 351
C C + C+CP R GP C ++ P C L+ G CD L TG
Sbjct: 857 CSAGAPCDAVTGSCICPAGRWGPRCAQKCLPGHYAAGCQLNCSCLHGGICDRL-TG 911
Score = 62 (26.9 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE 335
C + C ++ C+C P +TG C E CP +
Sbjct: 1029 CRQGAACDPVSGACICSPGKTGVRC-EHGCPQD 1060
Score = 62 (26.9 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 20/61 (32%), Positives = 24/61 (39%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEIC 332
K+GV H G P + F ++ C C C N C CP GP C E C
Sbjct: 1048 KTGVRCEH---GCPQDRFGKGCEL-KCA--CRNGGLCHATNGSCSCPLGWMGPHC-EHAC 1100
Query: 333 P 333
P
Sbjct: 1101 P 1101
Score = 61 (26.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/71 (29%), Positives = 29/71 (40%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQV 364
C T ++ Q C GPDC I P C HG CD + +G+ + Y+
Sbjct: 742 CAPGWTGLSCQRACDSGHWGPDC---IHPCNCSA--GHGNCDAV-SGLCLCEAG---YEG 792
Query: 365 DLIRCTCRQVY 375
+CRQ Y
Sbjct: 793 PRCEQSCRQGY 803
Score = 60 (26.2 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 20/73 (27%), Positives = 28/73 (38%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVHITHGRTL- 360
C +T + + CP R G C+ + C N CH +C L G H H
Sbjct: 1044 CSPGKTGVRCEHGCPQDRFGKGCELKCACRNGGLCHATNGSCSCPLGWMGPHCEHACPAG 1103
Query: 361 HYQVD-LIRCTCR 372
Y L+ C C+
Sbjct: 1104 RYGAACLLECFCQ 1116
Score = 58 (25.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 17/60 (28%), Positives = 23/60 (38%)
Query: 305 CPENRTC--INNQC--VCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTL 360
C C ++ +C CPP G DC +E CP G+C + H G L
Sbjct: 596 CQPGVACDPVSGECRTQCPPGYQGEDCGQE-CPVGTFGVNCSGSCSCVGAPCHRVTGECL 654
Score = 56 (24.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEE 330
C CPE R + Q +CP G C E
Sbjct: 664 CGADCPEGRWGLGCQEICPACEHGASCNPE 693
Score = 55 (24.4 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 19/72 (26%), Positives = 27/72 (37%)
Query: 268 GYEVLEAKSGVMTIH--YKQGKPSEGFNATYQIFSCPDKC--PENRTC--INNQCVCPPR 321
G+ +A SG+ Y+ + + Y SC KC C ++ C CP
Sbjct: 773 GHGNCDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCEQKCRCEHGAACDHVSGACTCPAG 832
Query: 322 RTGPDCQEEICP 333
G C E CP
Sbjct: 833 WRGSFC-EHACP 843
Score = 53 (23.7 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C C + C+CP TG CQ CP
Sbjct: 900 CLHGGICDRLTGHCLCPAGWTGDKCQSS-CP 929
Score = 53 (23.7 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 18/59 (30%), Positives = 22/59 (37%)
Query: 277 GVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
G + +QG PS + + C KC TC C CP G DC CP
Sbjct: 961 GFTGLSCEQGCPSGRYGPGCEHI-C--KCLNGGTCDPATGACYCPAGFLGADCSLA-CP 1015
Score = 49 (22.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 318 CPPRRTGPDCQEEICPNECH 337
CPP GP C E+ + H
Sbjct: 536 CPPWAFGPGCSEDCLCEQSH 555
Score = 48 (22.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQE 329
+C + C ++ QC+CP G C++
Sbjct: 1166 ECQQGAPCDPVSGQCLCPAGFHGQFCEK 1193
Score = 48 (22.0 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 128 SITGECICQDNTQGKNCE-RCLPGYYGDPTDGGTCY 162
++T + +C D++ G +C C D +GGTC+
Sbjct: 399 TLTEKFVCLDHSFGHDCSLTC-----DDCRNGGTCF 429
Score = 45 (20.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 301 CPDKCPEN---RTCINNQCVCPPRRTGPDCQEEI-CP 333
C CP C +C+CPP + E CP
Sbjct: 924 CQSSCPRGWFGEACAQ-RCLCPPNASCHHVTGECRCP 959
Score = 45 (20.9 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 301 CPDKCPENRTCI--NNQCVCPPRRTGPDCQE 329
CP C +C C+C P G CQ+
Sbjct: 681 CP-ACEHGASCNPETGTCLCLPGFVGSRCQD 710
Score = 42 (19.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 318 CPPRRTGPDCQEEICPNECHE 338
CP GP CQ +C EC +
Sbjct: 1152 CPSGFHGPGCQR-VC--ECQQ 1169
>RGD|735084 [details] [associations]
symbol:Megf10 "multiple EGF-like domains 10" species:10116
"Rattus norvegicus" [GO:0001891 "phagocytic cup" evidence=ISO]
[GO:0014719 "satellite cell activation" evidence=ISO] [GO:0014816
"satellite cell differentiation" evidence=ISO] [GO:0014841
"satellite cell proliferation" evidence=ISO] [GO:0034109 "homotypic
cell-cell adhesion" evidence=ISO] [GO:0042552 "myelination"
evidence=NAS] [GO:0043654 "recognition of apoptotic cell"
evidence=ISO] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0051147 "regulation of muscle cell
differentiation" evidence=ISO] [GO:0055001 "muscle cell
development" evidence=ISO] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 RGD:735084 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042552 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HOGENOM:HOG000294130 Pfam:PF12661
HSSP:P01132 OrthoDB:EOG42JNQJ IPI:IPI00371424 UniGene:Rn.224926
EMBL:L41686 ProteinModelPortal:Q63404 PhosphoSite:Q63404
UCSC:RGD:735084 HOVERGEN:HBG072163 InParanoid:Q63404
Genevestigator:Q63404 Uniprot:Q63404
Length = 220
Score = 164 (62.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 48/152 (31%), Positives = 63/152 (41%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
I G C+ P Y+ C+ C G G C C C N C H G C C G C
Sbjct: 8 ITGECRCSPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECS-CPSGWMGTVC 66
Query: 94 -QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGY 151
Q C G +G +QE C C++ G G CD+ TG+C C G+ C+ C G
Sbjct: 67 GQPCPEGRFGKNCSQE----CQCHN-G----GACDAATGQCHCSPGYTGERCQDECPVGT 117
Query: 152 YGDP-------TDGGTCYY---QCMARGMLTG 173
YG +GG CY+ C+ +G
Sbjct: 118 YGVRCAETCRCVNGGKCYHVSGTCLCEAGFSG 149
Score = 161 (61.7 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 41/122 (33%), Positives = 56/122 (45%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
G C P Y+ CQ C +G GV C+ C C N C H G C C +G+ C+
Sbjct: 96 GQCHCSPGYTGERCQDECPVGTYGVRCAETCRCVNGGKCYHVSGTC-LCEAGFSGEFCEA 154
Query: 95 -YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYY 152
C G YG ++C C H ++ C ++GEC C+ G C E C PG+Y
Sbjct: 155 RLCPEGLYGIKCD----KRCPC--HLDNTHS-CHPMSGECGCKPGWSGLYCNETCSPGFY 207
Query: 153 GD 154
G+
Sbjct: 208 GE 209
Score = 152 (58.6 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 43/136 (31%), Positives = 58/136 (42%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +C++ + G C P + C C G G +CS C C+N C G C C
Sbjct: 44 NGGVCHH--VTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGACDAATGQC-HC 100
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG+ CQ C G+YG E CR C + G C ++G C+C+ G+
Sbjct: 101 SPGYTGERCQDECPVGTYG-VRCAETCR---CVNGGK-----CYHVSGTCLCEAGFSGEF 151
Query: 144 CER--CLPGYYGDPTD 157
CE C G YG D
Sbjct: 152 CEARLCPEGLYGIKCD 167
Score = 49 (22.3 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 301 CPDKCP---EN-RTC--INNQCVCPPRRTGPDCQEEICP 333
C +CP +N +C ++ +C C P +G C E P
Sbjct: 166 CDKRCPCHLDNTHSCHPMSGECGCKPGWSGLYCNETCSP 204
>UNIPROTKB|P24821 [details] [associations]
symbol:TNC "Tenascin" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005614 "interstitial matrix"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0014012 "peripheral nervous
system axon regeneration" evidence=IEA] [GO:0060739
"mesenchymal-epithelial cell signaling involved in prostate gland
development" evidence=IEA] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IEA] [GO:0045545 "syndecan binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0005615
"extracellular space" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] InterPro:IPR000742 InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060
SMART:SM00181 EMBL:M55618 INTERPRO:IPR002181 Reactome:REACT_111102
GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009611 GO:GO:0008284 GO:GO:0007528 SUPFAM:SSF49265
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
GO:GO:0010628 eggNOG:NOG12793 GO:GO:0005604 GO:GO:0060740
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0014012 GO:GO:0005614
InterPro:IPR013111 Pfam:PF07974 Pfam:PF12661 HOVERGEN:HBG008949
OrthoDB:EOG4MSCX9 EMBL:X56160 EMBL:X78565 EMBL:AL162425 EMBL:X80280
EMBL:M24630 IPI:IPI00031008 IPI:IPI00220211 IPI:IPI00220213
IPI:IPI00220214 IPI:IPI00220216 IPI:IPI01015608 PIR:I38337
RefSeq:NP_002151.2 UniGene:Hs.143250 UniGene:Hs.734766 PDB:1TEN
PDB:2RB8 PDB:2RBL PDBsum:1TEN PDBsum:2RB8 PDBsum:2RBL
ProteinModelPortal:P24821 SMR:P24821 STRING:P24821
PhosphoSite:P24821 DMDM:281185495 PaxDb:P24821 PRIDE:P24821
Ensembl:ENST00000340094 Ensembl:ENST00000345230
Ensembl:ENST00000346706 Ensembl:ENST00000350763
Ensembl:ENST00000535648 Ensembl:ENST00000537320 GeneID:3371
KEGG:hsa:3371 UCSC:uc004bjj.4 CTD:3371 GeneCards:GC09M117782
HGNC:HGNC:5318 HPA:CAB004592 HPA:HPA004823 MIM:187380
neXtProt:NX_P24821 PharmGKB:PA35103 InParanoid:P24821 KO:K06252
OMA:GQRSCPN PhylomeDB:P24821 EvolutionaryTrace:P24821
GenomeRNAi:3371 NextBio:13334 ArrayExpress:P24821 Bgee:P24821
CleanEx:HS_TNC Genevestigator:P24821 GermOnline:ENSG00000041982
GO:GO:0060739 Uniprot:P24821
Length = 2201
Score = 154 (59.3 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 49/159 (30%), Positives = 73/159 (45%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTTG 90
C+N+ G C D C+C+ G+TG DC + C C+ H CV+G +CDE + TG
Sbjct: 381 CHNR---GRCV---DGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEGY---TG 431
Query: 91 DHCQYCRAGS---------YGNATTQEGCRKCDCN--SHGNSVL--GVCDSITGECICQD 137
+ C R + G ++G + DC+ S N G C + G C+C D
Sbjct: 432 EDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRC--VNGMCVCDD 489
Query: 138 NTQGKNC-ERCLPGYYGDPTDGGTCYY-QCMARGMLTGP 174
G++C +R P D ++ G C QC+ TGP
Sbjct: 490 GYTGEDCRDRQCPR---DCSNRGLCVDGQCVCEDGFTGP 525
Score = 150 (57.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 50/158 (31%), Positives = 70/158 (44%)
Query: 34 CYNKC-IYGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTT 89
C N C G C + C CE G+ G DCS ++C C+ H CV+G+ +CD D T
Sbjct: 439 CPNDCHSRGRCV---EGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCD---DGYT 492
Query: 90 GDHCQ--YC-RAGSY------GNATTQEGCRKCDCN--SHGNSVLGVCDSITGECICQDN 138
G+ C+ C R S G ++G DC S N G + G+C+C +
Sbjct: 493 GEDCRDRQCPRDCSNRGLCVDGQCVCEDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEG 552
Query: 139 TQGKNC--ERCLPGYYGDPTDGGTCYY-QCMARGMLTG 173
GK+C +RC +G G C QC+ TG
Sbjct: 553 FMGKDCKEQRCPSDCHGQ----GRCVDGQCICHEGFTG 586
Score = 135 (52.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 41/133 (30%), Positives = 60/133 (45%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTTG 90
C N+ G C D C CE G+TG DC+ ++C C+ CV+G +C H+ G
Sbjct: 505 CSNR---GLCV---DGQCVCEDGFTGPDCAELSCPNDCHGQGRCVNGQCVC---HEGFMG 555
Query: 91 DHC--QYCRAGSYGNATTQEG---CRK----CDCNSHG-----NSVLGVCDSITGECICQ 136
C Q C + +G +G C + DC H N+ LG C ++G CIC
Sbjct: 556 KDCKEQRCPSDCHGQGRCVDGQCICHEGFTGLDCGQHSCPSDCNN-LGQC--VSGRCICN 612
Query: 137 DNTQGKNCERCLP 149
+ G++C P
Sbjct: 613 EGYSGEDCSEVSP 625
Score = 125 (49.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C C++ QCVC TGPDC E CPN+CH G C
Sbjct: 501 CPRDCSNRGLCVDGQCVCEDGFTGPDCAELSCPNDCH---GQGRC 542
Score = 123 (48.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 23/57 (40%), Positives = 30/57 (52%)
Query: 290 EGFN-ATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+GF A CP+ C + C+N QCVC TG DC + CPN+CH + G C
Sbjct: 396 DGFTGADCGELKCPNGCSGHGRCVNGQCVCDEGYTGEDCSQLRCPNDCH---SRGRC 449
Score = 122 (48.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITH 356
+CP C + C+N C+C G DC EICP C E HGTC + G+ + H
Sbjct: 220 ACPSDCNDQGKCVNGVCICFEGYAGADCSREICPVPCSE--EHGTC---VDGLCVCH 271
Score = 120 (47.3 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SCP+ C C+N QCVC G DC+E+ CP++CH G C
Sbjct: 531 SCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQRCPSDCH---GQGRC 573
Score = 119 (46.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SCP+ C ++ C+N CVC TG DC++ CP +C N G C
Sbjct: 469 SCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCS---NRGLC 511
Score = 118 (46.6 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 39/126 (30%), Positives = 53/126 (42%)
Query: 34 CYNKC-IYGYCKGPPDYSCQCELGWTGVDCSVN-CL--CNNHSTCVHGIGICDECHDWTT 89
C + C G C+ + C C+ G+ GVDCS C C+N CV G C EC D T
Sbjct: 346 CPHACHTQGRCE---EGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGR--C-ECDDGFT 399
Query: 90 GDHCQY--CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-----CDS----ITGECICQDN 138
G C C G G+ G CD G + C S + G+C+C+
Sbjct: 400 GADCGELKCPNGCSGHGRCVNGQCVCDEGYTGEDCSQLRCPNDCHSRGRCVEGKCVCEQG 459
Query: 139 TQGKNC 144
+G +C
Sbjct: 460 FKGYDC 465
Score = 117 (46.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 37/131 (28%), Positives = 51/131 (38%)
Query: 33 LCYNKCI-YGYCKGPPDYSCQCELGWTGVDCSV-NC--LCNNHSTCVHGIGICDE----- 83
+C N C G C +C CE G+TG DC C C+ C G +CDE
Sbjct: 314 ICPNDCFDRGRCING---TCYCEEGFTGEDCGKPTCPHACHTQGRCEEGQCVCDEGFAGV 370
Query: 84 -CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNS----HGNSVLGVCDSITGECICQDN 138
C + C G +G DC +G S G C + G+C+C +
Sbjct: 371 DCSEKRCPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRC--VNGQCVCDEG 428
Query: 139 TQGKNCE--RC 147
G++C RC
Sbjct: 429 YTGEDCSQLRC 439
Score = 116 (45.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 47/164 (28%), Positives = 62/164 (37%)
Query: 30 NASLCYNKCIY-GYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDE-- 83
N LC N C G C + C C+ G+TG DCS + C C + C++G C+E
Sbjct: 280 NKPLCLNNCYNRGRCV---ENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGF 336
Query: 84 ----CHDWTTGDHCQYCRAGSYGNATTQEG-----C--RKCDCNSHGNSVLGVCDSITGE 132
C T C G EG C ++C + H G C + G
Sbjct: 337 TGEDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNR---GRC--VDGR 391
Query: 133 CICQDNTQGKNCE--RCLPGYYGDPTDGGTCYY-QCMARGMLTG 173
C C D G +C +C G G G C QC+ TG
Sbjct: 392 CECDDGFTGADCGELKCPNGCSGH----GRCVNGQCVCDEGYTG 431
Score = 115 (45.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 46/149 (30%), Positives = 58/149 (38%)
Query: 42 YCKGPPDYS-----CQCELGWTGVDCSV-NCLCNNH--STCVHGIGICDECHDWTTGDHC 93
+C G ++S C CE GW G +CS C N H C+ G ICD D TG+ C
Sbjct: 160 FCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICD---DGFTGEDC 216
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG----EC---ICQD--NTQGKNC 144
+Q C DCN G V GVC G +C IC + + C
Sbjct: 217 ------------SQLACPS-DCNDQGKCVNGVCICFEGYAGADCSREICPVPCSEEHGTC 263
Query: 145 ER----CLPGYYGDPTDGGTCYYQCMARG 169
C G+ GD + C C RG
Sbjct: 264 VDGLCVCHDGFAGDDCNKPLCLNNCYNRG 292
Score = 115 (45.5 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP+ C C+ +CVC G DC + CPN+CH+ HG C
Sbjct: 439 CPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQ---HGRC 480
Score = 114 (45.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHE---FLNHGTC 345
C + C C+ N+CVC TG DC E ICPN+C + +N GTC
Sbjct: 284 CLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCIN-GTC 330
Score = 106 (42.4 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 19/46 (41%), Positives = 22/46 (47%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+CP C C QCVC G DC E+ CP +CH N G C
Sbjct: 345 TCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCH---NRGRC 387
Score = 106 (42.4 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP+ C + CIN C C TG DC + CP+ CH G C+
Sbjct: 315 CPNDCFDRGRCINGTCYCEEGFTGEDCGKPTCPHACH---TQGRCE 357
Score = 102 (41.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C C++ QC+C TG DC + CP++C+ N G C
Sbjct: 563 CPSDCHGQGRCVDGQCICHEGFTGLDCGQHSCPSDCN---NLGQC 604
Score = 99 (39.9 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 18/45 (40%), Positives = 21/45 (46%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C C++ +C C TG DC E CPN C HG C
Sbjct: 377 CPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCS---GHGRC 418
Score = 76 (31.8 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNE 335
SCP C C++ +C+C +G DC E P +
Sbjct: 593 SCPSDCNNLGQCVSGRCICNEGYSGEDCSEVSPPKD 628
Score = 73 (30.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 37/112 (33%), Positives = 48/112 (42%)
Query: 65 NCLCNNHSTCVHGIGICDECHDWTTG--DHCQYCRAGSYGNATTQEGCR-KCD------- 114
N + + C G G C C TG D +C +G GN +T EGC C+
Sbjct: 131 NLVSSLREQCTAGAG-C--CLQPATGRLDTRPFC-SGR-GNFST-EGCGCVCEPGWKGPN 184
Query: 115 CNSH---GNSVL-GVCDSITGECICQDNTQGKNCER-CLPGYYGDPTDGGTC 161
C+ GN L G C I G+CIC D G++C + P D D G C
Sbjct: 185 CSEPECPGNCHLRGRC--IDGQCICDDGFTGEDCSQLACPS---DCNDQGKC 231
>MGI|MGI:101922 [details] [associations]
symbol:Tnc "tenascin C" species:10090 "Mus musculus"
[GO:0001968 "fibronectin binding" evidence=ISO] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005614 "interstitial matrix" evidence=IDA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0010628 "positive regulation of
gene expression" evidence=IDA] [GO:0014012 "peripheral nervous
system axon regeneration" evidence=IMP] [GO:0045545 "syndecan
binding" evidence=ISO] [GO:0060739 "mesenchymal-epithelial cell
signaling involved in prostate gland development" evidence=IMP]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 MGI:MGI:101922
INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0008284 GO:GO:0007528 SUPFAM:SSF49265
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0010628 eggNOG:NOG12793 GO:GO:0005604 GO:GO:0060740
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0014012 GO:GO:0005614
InterPro:IPR013111 Pfam:PF07974 Pfam:PF12661 GO:GO:0045545
HOVERGEN:HBG008949 OrthoDB:EOG4MSCX9 CTD:3371 KO:K06252 OMA:GQRSCPN
GO:GO:0060739 EMBL:D90343 EMBL:X56304 EMBL:AL732556 IPI:IPI00403938
IPI:IPI00420656 IPI:IPI00785310 IPI:IPI00785346 IPI:IPI00785360
PIR:JQ1322 RefSeq:NP_035737.2 UniGene:Mm.454219 UniGene:Mm.980
HSSP:P24821 ProteinModelPortal:Q80YX1 SMR:Q80YX1 STRING:Q80YX1
PhosphoSite:Q80YX1 PaxDb:Q80YX1 PRIDE:Q80YX1
Ensembl:ENSMUST00000030056 Ensembl:ENSMUST00000107372
Ensembl:ENSMUST00000107377 GeneID:21923 KEGG:mmu:21923
UCSC:uc008thg.2 GeneTree:ENSGT00690000102056 HOGENOM:HOG000234355
InParanoid:Q80YX1 NextBio:301496 Bgee:Q80YX1 CleanEx:MM_TNC
Genevestigator:Q80YX1 GermOnline:ENSMUSG00000028364 Uniprot:Q80YX1
Length = 2110
Score = 149 (57.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 53/163 (32%), Positives = 78/163 (47%)
Query: 34 CYNKCIYGYC-KGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTT 89
C+N+ G C +G C CE G+ G DCS ++C C+ H CV+G+ ICD+ D+T
Sbjct: 443 CHNR---GLCVQG----KCICEQGFKGFDCSEMSCPNDCHQHGRCVNGMCICDD--DYT- 492
Query: 90 GDHCQ--YC-----RAGSY--GNATTQEG-----CRKCDCNS--HGNSVLGVCDSITGEC 133
G+ C+ C + G G ++G C + C S HG+ G C + G+C
Sbjct: 493 GEDCRDRRCPRDCSQRGRCVDGQCICEDGFTGPDCAELSCPSDCHGH---GRC--VNGQC 547
Query: 134 ICQDNTQGKNC--ERCLPGYYGDPTDGGTCYY-QCMARGMLTG 173
IC + GK+C +RC +G G C QC+ TG
Sbjct: 548 ICHEGFTGKDCKEQRCPSDCHGQ----GRCEDGQCICHEGFTG 586
Score = 147 (56.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 46/143 (32%), Positives = 66/143 (46%)
Query: 51 CQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS------- 100
C+C+ G+TG DC + C C+ H CV+G +CDE + TG+ C R +
Sbjct: 392 CECDDGFTGADCGDLQCPNGCSGHGRCVNGQCVCDEGY---TGEDCSQRRCPNDCHNRGL 448
Query: 101 --YGNATTQEGCRKCDCN--SHGNSVL--GVCDSITGECICQDNTQGKNCE--RCLPGYY 152
G ++G + DC+ S N G C + G CIC D+ G++C RC P
Sbjct: 449 CVQGKCICEQGFKGFDCSEMSCPNDCHQHGRC--VNGMCICDDDYTGEDCRDRRC-PR-- 503
Query: 153 GDPTDGGTCYY-QCMARGMLTGP 174
D + G C QC+ TGP
Sbjct: 504 -DCSQRGRCVDGQCICEDGFTGP 525
Score = 138 (53.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 36/116 (31%), Positives = 52/116 (44%)
Query: 48 DYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTTGDHC--QYCRAGSYG 102
D C CE G+TG DC+ ++C C+ H CV+G IC H+ TG C Q C + +G
Sbjct: 513 DGQCICEDGFTGPDCAELSCPSDCHGHGRCVNGQCIC---HEGFTGKDCKEQRCPSDCHG 569
Query: 103 NATTQEG---CRK----CDCNSHG--NSVLGVCDSITGECICQDNTQGKNCERCLP 149
++G C + DC N ++G CIC + G +C P
Sbjct: 570 QGRCEDGQCICHEGFTGLDCGQRSCPNDCSNQGQCVSGRCICNEGYTGIDCSEVSP 625
Score = 131 (51.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 24/57 (42%), Positives = 30/57 (52%)
Query: 290 EGFN-ATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+GF A CP+ C + C+N QCVC TG DC + CPN+CH N G C
Sbjct: 396 DGFTGADCGDLQCPNGCSGHGRCVNGQCVCDEGYTGEDCSQRRCPNDCH---NRGLC 449
Score = 129 (50.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C + C++ QC+C TGPDC E CP++CH HG C
Sbjct: 501 CPRDCSQRGRCVDGQCICEDGFTGPDCAELSCPSDCH---GHGRC 542
Score = 128 (50.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 47/161 (29%), Positives = 63/161 (39%)
Query: 30 NASLCYNKCIY-GYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDE-- 83
N LC N C G C + C C+ G+TG DCS + C C + C++G C+E
Sbjct: 280 NEPLCLNNCYNRGRCV---ENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGF 336
Query: 84 ----CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV----LGVCDSITGECIC 135
C + T + CQ G EG DC+ G C + G+C C
Sbjct: 337 TGEDCGELTCPNDCQGRGQCEEGQCVCNEGFAGADCSEKRCPADCHHRGRC--LNGQCEC 394
Query: 136 QDNTQGKNCE--RCLPGYYGDPTDGGTCYY-QCMARGMLTG 173
D G +C +C G G G C QC+ TG
Sbjct: 395 DDGFTGADCGDLQCPNGCSGH----GRCVNGQCVCDEGYTG 431
Score = 127 (49.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
SCP C + C+N QC+C TG DC+E+ CP++CH G C+
Sbjct: 531 SCPSDCHGHGRCVNGQCICHEGFTGKDCKEQRCPSDCH---GQGRCE 574
Score = 117 (46.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 44/154 (28%), Positives = 60/154 (38%)
Query: 42 YCKGPPDYS-----CQCELGWTGVDCSV-NCL--CNNHSTCVHGIGICDE------CHDW 87
+C G ++S C CE GW G +CS +C CN C+ G ICDE C
Sbjct: 160 FCSGRGNFSAEGCGCVCEPGWKGPNCSEPDCPGNCNLRGQCLDGQCICDEGFTGEDCSQL 219
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVL-----GVCDSITGECICQDNTQGK 142
+ C G EG DC V G+C + G C+C+D G+
Sbjct: 220 ACPNDCNDQGRCVNGVCVCFEGYAGPDCGLEVCPVPCSEEHGMC--VDGRCVCKDGFAGE 277
Query: 143 NCER--CLPGYYGDPTDGGTCYY-QCMARGMLTG 173
+C CL Y + G C +C+ TG
Sbjct: 278 DCNEPLCLNNCY----NRGRCVENECVCDEGFTG 307
Score = 117 (46.2 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 36/131 (27%), Positives = 52/131 (39%)
Query: 33 LCYNKCI-YGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDE----- 83
+C N C G C +C CE G+TG DC + C C C G +C+E
Sbjct: 314 ICPNDCFDRGRCING---TCYCEEGFTGEDCGELTCPNDCQGRGQCEEGQCVCNEGFAGA 370
Query: 84 -CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNS----HGNSVLGVCDSITGECICQDN 138
C + C + G +G DC +G S G C + G+C+C +
Sbjct: 371 DCSEKRCPADCHHRGRCLNGQCECDDGFTGADCGDLQCPNGCSGHGRC--VNGQCVCDEG 428
Query: 139 TQGKNCE--RC 147
G++C RC
Sbjct: 429 YTGEDCSQRRC 439
Score = 116 (45.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP+ C C+ +C+C G DC E CPN+CH+ HG C
Sbjct: 439 CPNDCHNRGLCVQGKCICEQGFKGFDCSEMSCPNDCHQ---HGRC 480
Score = 116 (45.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 290 EGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+GF+ + SCP+ C ++ C+N C+C TG DC++ CP +C + G C
Sbjct: 461 KGFDCSEM--SCPNDCHQHGRCVNGMCICDDDYTGEDCRDRRCPRDCSQ---RGRC 511
Score = 108 (43.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP+ C + CIN C C TG DC E CPN+C G C+
Sbjct: 315 CPNDCFDRGRCINGTCYCEEGFTGEDCGELTCPNDCQ---GRGQCE 357
Score = 107 (42.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 23/58 (39%), Positives = 26/58 (44%)
Query: 289 SEGF-NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+EGF A CP C C+N QC C TG DC + CPN C HG C
Sbjct: 364 NEGFAGADCSEKRCPADCHHRGRCLNGQCECDDGFTGADCGDLQCPNGCS---GHGRC 418
Score = 103 (41.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+CP+ C C QCVC G DC E+ CP +CH + G C
Sbjct: 345 TCPNDCQGRGQCEEGQCVCNEGFAGADCSEKRCPADCH---HRGRC 387
Score = 102 (41.0 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C C + QC+C TG DC + CPN+C N G C
Sbjct: 563 CPSDCHGQGRCEDGQCICHEGFTGLDCGQRSCPNDCS---NQGQC 604
Score = 83 (34.3 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNE 335
SCP+ C C++ +C+C TG DC E P +
Sbjct: 593 SCPNDCSNQGQCVSGRCICNEGYTGIDCSEVSPPKD 628
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 168 RGMLTGPGPQGLGSGLAE 185
RG++TG G + L SG +
Sbjct: 1496 RGLITGIGYEVLVSGFTQ 1513
>UNIPROTKB|A0JM12 [details] [associations]
symbol:megf10 "Multiple epidermal growth factor-like
domains protein 10" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014816
"satellite cell differentiation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0016021 GO:GO:0005886 GO:GO:0007155 GO:GO:0006909
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 CTD:84466
HOVERGEN:HBG108333 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:BC125696 RefSeq:NP_001072726.1 UniGene:Str.46279
ProteinModelPortal:A0JM12 Ensembl:ENSXETT00000034579 GeneID:780183
KEGG:xtr:780183 Xenbase:XB-GENE-491974 Bgee:A0JM12 Uniprot:A0JM12
Length = 1114
Score = 194 (73.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 61/175 (34%), Positives = 76/175 (43%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTG--------VD-----CSVNCLCNNHSTCVHGIGI 80
C +KC++G C P +CQCE GW G VD CS C C N + C G
Sbjct: 108 CADKCVHGRCIAPN--TCQCEPGWGGPNCSSACDVDHWGPHCSSRCQCKNGALCNPITGA 165
Query: 81 CDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C C G C+ C G+YGN Q KC C + G S CD +TGEC C
Sbjct: 166 C-HCSSGYKGWRCEERCDQGTYGNDCQQ----KCQCQN-GAS----CDHVTGECRCPPGY 215
Query: 140 QGKNCER-CLPGYYGDPTD-------GGTCYY-----QCMA--RGMLTG-PGPQG 178
G CE C PG +G + GG C++ C A G + G P P+G
Sbjct: 216 TGAFCEDLCPPGKHGSQCEERCPCQNGGVCHHVTGECSCPAGWMGTVCGQPCPEG 270
Score = 188 (71.2 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 56/163 (34%), Positives = 69/163 (42%)
Query: 34 CYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C N C + G C+ PP Y+ C+ C G G C C C N C H G C
Sbjct: 196 CQNGASCDHVTGECRCPPGYTGAFCEDLCPPGKHGSQCEERCPCQNGGVCHHVTGECSCP 255
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
W G C Q C G YG +QE C C++ G G CDS TG+C C G+
Sbjct: 256 AGWM-GTVCGQPCPEGRYGRNCSQE----CQCHN-G----GTCDSATGQCYCSPGYNGER 305
Query: 144 C-ERCLPGYYG-------DPTDGGTCYYQCMARGMLTGPGPQG 178
C E C G YG +GG CY+ ++ L PG G
Sbjct: 306 CQEECPVGLYGVKCAQTCQCLNGGKCYH--ISGACLCEPGYTG 346
Score = 170 (64.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 46/126 (36%), Positives = 62/126 (49%)
Query: 34 CYNK--C-IY-GYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C+N C Y G CK P ++ C +C LG+ G +C++ C C N + C H G C C
Sbjct: 717 CHNGAYCSAYDGECKCSPGWTGLYCTQRCPLGYYGKECTLVCQCQNGADCDHITGQCT-C 775
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G C Q C + SYG GCR+ CDC + NS CD ITG C C +G
Sbjct: 776 RTGFMGKFCEQKCPSASYGY-----GCRQVCDCLN--NST---CDHITGTCYCSPGWKGA 825
Query: 143 NCERCL 148
C++ +
Sbjct: 826 RCDQAV 831
Score = 166 (63.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 47/145 (32%), Positives = 63/145 (43%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDE 83
+SLC C P D SC C+ GW GVDCS+NC CN C++G G C+
Sbjct: 452 SSLC--NCKNNAVCSPVDGSCTCKAGWHGVDCSINCPRGSWGLGCNLTCQCLNG-GACNP 508
Query: 84 ------CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
C G C+ C+ G+YG + +CDC SH + C TG C C
Sbjct: 509 LDGTCTCAPGWRGLKCELPCQDGTYGMNCIE----RCDC-SHADG----CHPATGYCRCL 559
Query: 137 DNTQGKNCERCLPGYYGDPTDGGTC 161
G +C+ PG + P +C
Sbjct: 560 AGWAGMHCDSVCPGGHWGPNCSLSC 584
Score = 165 (63.1 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 46/128 (35%), Positives = 57/128 (44%)
Query: 41 GYCK---GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
GYC+ G C C G G +CS++C C N ++C GIC EC G CQ
Sbjct: 554 GYCRCLAGWAGMHCDSVCPGGHWGPNCSLSCDCKNGASCSPDDGIC-ECAPGYRGTTCQR 612
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYG 153
C G YG+ +Q C +C H N G C +TG+C C G C E C G YG
Sbjct: 613 ICSPGFYGHRCSQ-ACPQC---VHSN---GPCHHVTGQCDCLAGFMGSLCNEVCPSGRYG 665
Query: 154 DPTDGGTC 161
G C
Sbjct: 666 KNC-AGVC 672
Score = 159 (61.0 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 46/128 (35%), Positives = 57/128 (44%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSV---------NCL----CNNHSTCVHGIGICDECHDW 87
G C P D +CQC GW G DCS NC+ C+N + C G C +C
Sbjct: 678 GTCN-PIDGTCQCYPGWIGNDCSQACPPGHWGPNCIHTCNCHNGAYCSAYDGEC-KCSPG 735
Query: 88 TTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE- 145
TG +C Q C G YG T C C + + CD ITG+C C+ GK CE
Sbjct: 736 WTGLYCTQRCPLGYYGKECTLV----CQCQNGAD-----CDHITGQCTCRTGFMGKFCEQ 786
Query: 146 RCLPGYYG 153
+C YG
Sbjct: 787 KCPSASYG 794
Score = 154 (59.3 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 51/165 (30%), Positives = 66/165 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +C++ + G C P + C C G G +CS C C+N TC G C C
Sbjct: 241 NGGVCHH--VTGECSCPAGWMGTVCGQPCPEGRYGRNCSQECQCHNGGTCDSATGQC-YC 297
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
G+ CQ C G YG Q C C + G C I+G C+C+ G+
Sbjct: 298 SPGYNGERCQEECPVGLYGVKCAQT----CQCLNGGK-----CYHISGACLCEPGYTGER 348
Query: 144 CER--CLPGYYGDPTDGGT-CYYQ----C--MARGMLTGPGPQGL 179
CE C G YG D C+ Q C M+ PG GL
Sbjct: 349 CETPLCSEGTYGMKCDKKCPCHLQYTQSCHPMSGECACKPGRSGL 393
Score = 142 (55.0 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 49/142 (34%), Positives = 58/142 (40%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY- 95
KCI D S C G GV+CS C C N++ C G C C G C
Sbjct: 426 KCICAPGFTGVDCSTACPPGTYGVNCSSLCNCKNNAVCSPVDGSCT-CKAGWHGVDCSIN 484
Query: 96 CRAGSYGNATTQEGCR-KCDCNSHG--NSVLGVCDSITG------ECICQDNTQGKNC-E 145
C GS+G GC C C + G N + G C G E CQD T G NC E
Sbjct: 485 CPRGSWGL-----GCNLTCQCLNGGACNPLDGTCTCAPGWRGLKCELPCQDGTYGMNCIE 539
Query: 146 RCLPGYYGDPTDGGTCYYQCMA 167
RC + D T Y +C+A
Sbjct: 540 RC-DCSHADGCHPATGYCRCLA 560
Score = 137 (53.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 43/131 (32%), Positives = 59/131 (45%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNC-LC-NNHSTCVHGIGICDECHDWTTGDHC 93
G C+ P Y +CQ C G+ G CS C C +++ C H G CD C G C
Sbjct: 597 GICECAPGYRGTTCQRICSPGFYGHRCSQACPQCVHSNGPCHHVTGQCD-CLAGFMGSLC 655
Query: 94 -QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPG 150
+ C +G YG + C C C ++G C+ I G C C G +C + C PG
Sbjct: 656 NEVCPSGRYG-----KNCAGVCACTNNGT-----CNPIDGTCQCYPGWIGNDCSQACPPG 705
Query: 151 YYGDPTDGGTC 161
++G P TC
Sbjct: 706 HWG-PNCIHTC 715
Score = 136 (52.9 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 35/103 (33%), Positives = 45/103 (43%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR 111
C G G +C+ C C N+ TC G C +C+ G+ C Q C G +G C
Sbjct: 659 CPSGRYGKNCAGVCACTNNGTCNPIDGTC-QCYPGWIGNDCSQACPPGHWG-----PNCI 712
Query: 112 KCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYG 153
CN H + C + GEC C G C +RC GYYG
Sbjct: 713 HT-CNCHNGAY---CSAYDGECKCSPGWTGLYCTQRCPLGYYG 751
Score = 123 (48.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 46/155 (29%), Positives = 59/155 (38%)
Query: 20 RCTVLLLYIFNASLCYNKCIYGYCK-GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVH 76
+C L Y + +C CK G C C LG+ G C C C N + C
Sbjct: 366 KCPCHLQYTQSCHPMSGECA---CKPGRSGLYCNETCSLGFYGEFCQQICSCQNGADCDS 422
Query: 77 GIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECIC 135
G C C TG C C G+YG C CN N+V C + G C C
Sbjct: 423 VTGKCI-CAPGFTGVDCSTACPPGTYG-----VNCSSL-CNCKNNAV---CSPVDGSCTC 472
Query: 136 QDNTQGKNCE-RCLPGYYGDPTDGGTCYYQCMARG 169
+ G +C C G +G + TC QC+ G
Sbjct: 473 KAGWHGVDCSINCPRGSWGLGCNL-TC--QCLNGG 504
Score = 69 (29.3 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 20/56 (35%), Positives = 23/56 (41%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTG--VHIT 355
+C TC QC C P G CQEE CP + TC L G HI+
Sbjct: 281 QCHNGGTCDSATGQCYCSPGYNGERCQEE-CPVGLYGVKCAQTCQCLNGGKCYHIS 335
Score = 63 (27.2 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 25/77 (32%), Positives = 33/77 (42%)
Query: 289 SEGFNATYQIFSCPDKCP----ENRTC--INNQCVCPPRRTGPDCQE--------EICPN 334
SEG TY + C KCP ++C ++ +C C P R+G C E E C
Sbjct: 355 SEG---TYGM-KCDKKCPCHLQYTQSCHPMSGECACKPGRSGLYCNETCSLGFYGEFCQQ 410
Query: 335 ECHEFLNHGTCDLLLTG 351
C N CD + TG
Sbjct: 411 IC-SCQNGADCDSV-TG 425
Score = 62 (26.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP R G +C +E C +CH N GTCD
Sbjct: 267 CPEGRYGRNCSQE-C--QCH---NGGTCD 289
Score = 62 (26.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 21/69 (30%), Positives = 28/69 (40%)
Query: 312 INNQC--VCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVHITHGRTLHY---Q 363
I N C CPP GP+C C N C + C TG++ T L Y +
Sbjct: 694 IGNDCSQACPPGHWGPNCIHTCNCHNGAYCSAYDGECKCSPGWTGLYCTQRCPLGYYGKE 753
Query: 364 VDLIRCTCR 372
L+ C C+
Sbjct: 754 CTLV-CQCQ 761
Score = 60 (26.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C N TC I+ C C P G DC + CP
Sbjct: 674 CTNNGTCNPIDGTCQCYPGWIGNDCSQA-CP 703
Score = 60 (26.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 289 SEGFNATY--QIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICP 333
S GF + QI SC + + + +C+C P TG DC CP
Sbjct: 400 SLGFYGEFCQQICSCQNGA--DCDSVTGKCICAPGFTGVDCSTA-CP 443
Score = 60 (26.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGV--HIT 355
+C C I QC C G C+++ CP+ + + CD L HIT
Sbjct: 759 QCQNGADCDHITGQCTCRTGFMGKFCEQK-CPSASYGYGCRQVCDCLNNSTCDHIT 813
Score = 55 (24.4 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEIC 332
+C C I+ C+C P TG C+ +C
Sbjct: 324 QCLNGGKCYHISGACLCEPGYTGERCETPLC 354
Score = 53 (23.7 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 20/68 (29%), Positives = 26/68 (38%)
Query: 289 SEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEFL- 340
S GF +CP N C + QC C G C E +CP+ C
Sbjct: 615 SPGFYGHRCSQACPQCVHSNGPCHHVTGQCDCLAGFMGSLCNE-VCPSGRYGKNCAGVCA 673
Query: 341 --NHGTCD 346
N+GTC+
Sbjct: 674 CTNNGTCN 681
Score = 52 (23.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 17/59 (28%), Positives = 23/59 (38%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEI 331
++G M +Q PS + Y D C N TC I C C P G C + +
Sbjct: 776 RTGFMGKFCEQKCPSASYG--YGCRQVCD-CLNNSTCDHITGTCYCSPGWKGARCDQAV 831
Score = 43 (20.2 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 300 SCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEIC 332
SC C +C + C C P G CQ IC
Sbjct: 583 SCD--CKNGASCSPDDGICECAPGYRGTTCQR-IC 614
Score = 42 (19.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 317 VCPPRRTGPDCQEEI-CPNECHEFLNHGTCD 346
VCP GP+C C N + G C+
Sbjct: 570 VCPGGHWGPNCSLSCDCKNGASCSPDDGICE 600
Score = 40 (19.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEIC 332
C T ++ CPP G +C +C
Sbjct: 429 CAPGFTGVDCSTACPPGTYGVNCSS-LC 455
>UNIPROTKB|A6BM72 [details] [associations]
symbol:MEGF11 "Multiple epidermal growth factor-like
domains protein 11" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0034109 "homotypic cell-cell adhesion"
evidence=ISS] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 GO:GO:0016323
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0010842
GO:GO:0034109 HOGENOM:HOG000294130 Pfam:PF12661 HOVERGEN:HBG108333
OrthoDB:EOG42JNQJ EMBL:AB058677 EMBL:AB300051 EMBL:AY358226
EMBL:AC011847 EMBL:AC084854 EMBL:AC087382 EMBL:BC117419
EMBL:BC126313 EMBL:AL834326 IPI:IPI00064606 IPI:IPI00432703
IPI:IPI00796004 IPI:IPI00872029 RefSeq:NP_115821.2
UniGene:Hs.712886 ProteinModelPortal:A6BM72 SMR:A6BM72
IntAct:A6BM72 MINT:MINT-2877220 STRING:A6BM72 PhosphoSite:A6BM72
PRIDE:A6BM72 Ensembl:ENST00000288745 Ensembl:ENST00000360698
Ensembl:ENST00000395614 Ensembl:ENST00000395625
Ensembl:ENST00000409699 Ensembl:ENST00000422354 GeneID:84465
KEGG:hsa:84465 UCSC:uc002apl.2 UCSC:uc002apm.2 CTD:84465
GeneCards:GC15M066187 H-InvDB:HIX0018384 HGNC:HGNC:29635
HPA:HPA017982 MIM:612454 neXtProt:NX_A6BM72 PharmGKB:PA144596411
InParanoid:A6BM72 OMA:ECMNNST ChiTaRS:MEGF11 GenomeRNAi:84465
NextBio:74270 ArrayExpress:A6BM72 Bgee:A6BM72 CleanEx:HS_MEGF11
Genevestigator:A6BM72 Uniprot:A6BM72
Length = 1044
Score = 187 (70.9 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 54/158 (34%), Positives = 70/158 (44%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGI--- 78
F LC +C++G C P +C CE GW G DCS C C+N C +G
Sbjct: 98 FCIPLCTEECVHGRCVSPD--TCHCEPGWGGPDCSSGCDSDHWGPHCSNRCQCQNGALCN 155
Query: 79 ---GICDECHDWTTGDHCQ-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGEC 133
G C C G C+ C G++G +GC+ C C HG S CD GEC
Sbjct: 156 PITGAC-VCAAGFRGWRCEELCAPGTHG-----KGCQLPCQCR-HGAS----CDPRAGEC 204
Query: 134 ICQDNTQGKNCER-CLPGYYGD------PT-DGGTCYY 163
+C G CE C PG +G P +GGTC++
Sbjct: 205 LCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHH 242
Score = 174 (66.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 48/146 (32%), Positives = 65/146 (44%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGI----- 78
+S+C C G P D SC C+ GW G+DC++ C CN TC +G
Sbjct: 447 SSIC--SCNNGGTCSPVDGSCTCKEGWQGLDCTLPCPSGTWGLNCNESCTCANGAACSPI 504
Query: 79 -GICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
G C W GD C+ C G++G ++ CDC SH + CD +TG C C
Sbjct: 505 DGSCSCTPGWL-GDTCELPCPDGTFGLNCSEH----CDC-SHADG----CDPVTGHCCCL 554
Query: 137 DNTQGKNCER-CLPGYYGDPTDGGTC 161
G C+ C PG +G P +C
Sbjct: 555 AGWTGIRCDSTCPPGRWG-PNCSVSC 579
Score = 169 (64.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 53/140 (37%), Positives = 65/140 (46%)
Query: 31 ASLCYNKCIY-GYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGIGICD 82
A LC C G C P D SCQC GW G DCS C C + +C +G
Sbjct: 664 AQLC--SCANNGTCS-PIDGSCQCFPGWIGKDCSQACPPGFWGPACFHACSCHNGASCSA 720
Query: 83 E---CH---DWTTGDHC-QYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECI 134
E CH WT G C Q C A +G + C R C C + G S CD I+G+C
Sbjct: 721 EDGACHCTPGWT-GLFCTQRCPAAFFG-----KDCGRVCQCQN-GAS----CDHISGKCT 769
Query: 135 CQDNTQGKNCE-RCLPGYYG 153
C+ G++CE RC PG +G
Sbjct: 770 CRTGFTGQHCEQRCAPGTFG 789
Score = 165 (63.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 44/125 (35%), Positives = 54/125 (43%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C Y CQ C G G CS +C C+N C G C EC G C
Sbjct: 286 VTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDCHNGGQCSPTTGAC-ECEPGYKGPRC 344
Query: 94 Q--YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLP 149
Q C G +G GC C C++ N++ C +TG C CQ G +C E C
Sbjct: 345 QERLCPEGLHG-----PGCTLPCPCDAD-NTIS--CHPVTGACTCQPGWSGHHCNESCPV 396
Query: 150 GYYGD 154
GYYGD
Sbjct: 397 GYYGD 401
Score = 164 (62.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 47/135 (34%), Positives = 59/135 (43%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-Q 94
G C P Y+ C+ C G G C + C C N TC H G C C TG C Q
Sbjct: 202 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGEC-ACPPGWTGAVCAQ 260
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYG 153
C G++G +Q+ C C+ HG G CD +TG+C C G C E C G +G
Sbjct: 261 PCPPGTFGQNCSQD----CPCH-HG----GQCDHVTGQCHCTAGYMGDRCQEECPFGSFG 311
Query: 154 -------DPTDGGTC 161
D +GG C
Sbjct: 312 FQCSQHCDCHNGGQC 326
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 44/133 (33%), Positives = 60/133 (45%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCV 75
F+A C+N G D +C C GWTG+ DC C C N ++C
Sbjct: 707 FHACSCHN----GASCSAEDGACHCTPGWTGLFCTQRCPAAFFGKDCGRVCQCQNGASCD 762
Query: 76 HGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGEC 133
H G C C TG HC Q C G++G GC++ C+C + NS CD +TG C
Sbjct: 763 HISGKCT-CRTGFTGQHCEQRCAPGTFGY-----GCQQLCECMN--NST---CDHVTGTC 811
Query: 134 ICQDNTQGKNCER 146
C +G C++
Sbjct: 812 YCSPGFKGIRCDQ 824
Score = 147 (56.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 51/162 (31%), Positives = 67/162 (41%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC-VHGI-GICDECHDWTTGDHC- 93
+C GY KGP C G G C++ C C+ +T H + G C C +G HC
Sbjct: 334 ECEPGY-KGPRCQERLCPEGLHGPGCTLPCPCDADNTISCHPVTGACT-CQPGWSGHHCN 391
Query: 94 QYCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGY 151
+ C G YG +GC+ C C + + C SITG C C G+ C C G
Sbjct: 392 ESCPVGYYG-----DGCQLPCTCQNGAD-----CHSITGGCTCAPGFMGEVCAVSCAAGT 441
Query: 152 YGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKD 193
YG P C C G + P GS + W+G D
Sbjct: 442 YG-PNCSSIC--SCNNGGTCS---PVD-GSCTC-KEGWQGLD 475
Score = 146 (56.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 43/133 (32%), Positives = 59/133 (44%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDH 92
+ G C P +S C C +G+ G C + C C N + C H I G C C G+
Sbjct: 375 VTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADC-HSITGGCT-CAPGFMGEV 432
Query: 93 CQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLP 149
C C AG+YG C C CN+ G G C + G C C++ QG +C C
Sbjct: 433 CAVSCAAGTYG-----PNCSSICSCNN-G----GTCSPVDGSCTCKEGWQGLDCTLPCPS 482
Query: 150 GYYG-DPTDGGTC 161
G +G + + TC
Sbjct: 483 GTWGLNCNESCTC 495
Score = 145 (56.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 45/133 (33%), Positives = 54/133 (40%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTTG 90
C G P D SC C GW G C + C C+ H C H G CD TG
Sbjct: 495 CANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADG-CDP----VTG 549
Query: 91 DHCQYCRAGSYG---NATTQEG-----CR-KCDCNSHGNSVLGVCDSITGECICQDNTQG 141
HC C AG G ++T G C C C + G+ C G C C +G
Sbjct: 550 -HC-CCLAGWTGIRCDSTCPPGRWGPNCSVSCSCENGGS-----CSPEDGSCECAPGFRG 602
Query: 142 KNCER-CLPGYYG 153
C+R C PG+YG
Sbjct: 603 PLCQRICPPGFYG 615
Score = 137 (53.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 43/137 (31%), Positives = 53/137 (38%)
Query: 34 CYNKCIYGYCKG--PPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVHGI 78
C C + G P C C GWTG+ +CSV+C C N +C
Sbjct: 532 CSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTCPPGRWGPNCSVSCSCENGGSCSPED 591
Query: 79 GICDECHDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C EC G CQ C G YG+ Q C C +S C I+G C C
Sbjct: 592 GSC-ECAPGFRGPLCQRICPPGFYGHGCAQP-CPLCVHSSRP------CHHISGICECLP 643
Query: 138 NTQGKNCER-CLPGYYG 153
G C + C GY+G
Sbjct: 644 GFSGALCNQVCAGGYFG 660
Score = 132 (51.5 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 45/147 (30%), Positives = 62/147 (42%)
Query: 26 LYIFNASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGI 80
L + ++ C++ I G C+ P +S C C G+ G DC+ C C N+ TC G
Sbjct: 624 LCVHSSRPCHH--ISGICECLPGFSGALCNQVCAGGYFGQDCAQLCSCANNGTCSPIDGS 681
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQDNT 139
C W D Q C G +G A C C C++ G S C + G C C
Sbjct: 682 CQCFPGWIGKDCSQACPPGFWGPA-----CFHACSCHN-GAS----CSAEDGACHCTPGW 731
Query: 140 QGKNC-ERCLPGYYGDPTDGGTCYYQC 165
G C +RC ++G G C QC
Sbjct: 732 TGLFCTQRCPAAFFGKDC-GRVC--QC 755
Score = 127 (49.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 50/158 (31%), Positives = 65/158 (41%)
Query: 30 NASLCYNKCIYGYC---KGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC N I G C G + C+ C G G C + C C + ++C G C C
Sbjct: 150 NGALC-NP-ITGACVCAAGFRGWRCEELCAPGTHGKGCQLPCQCRHGASCDPRAGEC-LC 206
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
TG +C+ C GS+G C +C C + G G C ITGEC C G
Sbjct: 207 APGYTGVYCEELCPPGSHG-----AHCELRCPCQN-G----GTCHHITGECACPPGWTGA 256
Query: 143 NCER-CLPGYYGD------PTD-GGTCYY-----QCMA 167
C + C PG +G P GG C + C A
Sbjct: 257 VCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTA 294
Score = 125 (49.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 47/153 (30%), Positives = 61/153 (39%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N + C++ I G C P + C C G G +CS C CNN TC G C C
Sbjct: 411 NGADCHS--ITGGCTCAPGFMGEVCAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSCT-C 467
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG------ECICQD 137
+ G C C +G++G E C C + + + G C G E C D
Sbjct: 468 KEGWQGLDCTLPCPSGTWG-LNCNESCT-CANGAACSPIDGSCSCTPGWLGDTCELPCPD 525
Query: 138 NTQGKNC-ERCLPGYYG--DPTDGGTCYYQCMA 167
T G NC E C + DP G C C+A
Sbjct: 526 GTFGLNCSEHCDCSHADGCDPVTGHCC---CLA 555
Score = 117 (46.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 59/202 (29%), Positives = 82/202 (40%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDHCQY-CRAGSYG-NATTQEG 109
C +G+ G C + C C N + C H I G C C G+ C C AG+YG N ++
Sbjct: 394 CPVGYYGDGCQLPCTCQNGADC-HSITGGCT-CAPGFMGEVCAVSCAAGTYGPNCSSICS 451
Query: 110 CRKCD-CNSHGNSVLGVC-DSITG-ECI--CQDNTQGKNCER---CLPGYYGDPTDGGTC 161
C C+ S C + G +C C T G NC C G P DG +C
Sbjct: 452 CNNGGTCSPVDGSC--TCKEGWQGLDCTLPCPSGTWGLNCNESCTCANGAACSPIDG-SC 508
Query: 162 YYQCMARGMLTG----PGPQG-LGSGLAER---NAWEGKDTPSRECLWIIGQS-LDSNST 212
C G L P P G G +E + +G D + C + G + + +ST
Sbjct: 509 --SCTP-GWLGDTCELPCPDGTFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDST 565
Query: 213 APADIILLRLQPDINVPCN-EN 233
P R P+ +V C+ EN
Sbjct: 566 CPPG----RWGPNCSVSCSCEN 583
Score = 76 (31.8 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 23/67 (34%), Positives = 28/67 (41%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP-----NECHEFL--NHG-TCDLLLT 350
CP C TC I +C CPP TG C + CP C + +HG CD +
Sbjct: 232 CP--CQNGGTCHHITGECACPPGWTGAVCAQP-CPPGTFGQNCSQDCPCHHGGQCDHVTG 288
Query: 351 GVHITHG 357
H T G
Sbjct: 289 QCHCTAG 295
Score = 73 (30.8 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 15/43 (34%), Positives = 16/43 (37%)
Query: 299 FSCPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEICPNECH 337
F C C C C C P GP CQE +CP H
Sbjct: 312 FQCSQHCDCHNGGQCSPTTGACECEPGYKGPRCQERLCPEGLH 354
Score = 63 (27.2 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNE----CH---EFLNHGTCD 346
+C +C I+ +C C TG C++ P C E +N+ TCD
Sbjct: 754 QCQNGASCDHISGKCTCRTGFTGQHCEQRCAPGTFGYGCQQLCECMNNSTCD 805
Score = 63 (27.2 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 22/72 (30%), Positives = 27/72 (37%)
Query: 300 SCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHG 357
SC C +C + C C P GP CQ ICP F HG VH +
Sbjct: 578 SC--SCENGGSCSPEDGSCECAPGFRGPLCQR-ICPPG---FYGHGCAQPCPLCVHSS-- 629
Query: 358 RTLHYQVDLIRC 369
R H+ + C
Sbjct: 630 RPCHHISGICEC 641
Score = 61 (26.5 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C N TC I+ C C P G DC + CP
Sbjct: 669 CANNGTCSPIDGSCQCFPGWIGKDCSQA-CP 698
Score = 60 (26.2 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 17/51 (33%), Positives = 19/51 (37%)
Query: 300 SCPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+C CP C + QC C G CQEE CP F CD
Sbjct: 270 NCSQDCPCHHGGQCDHVTGQCHCTAGYMGDRCQEE-CPFGSFGFQCSQHCD 319
Score = 56 (24.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 13/46 (28%), Positives = 17/46 (36%)
Query: 290 EGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
EG + CP +C + C C P +G C E CP
Sbjct: 351 EGLHGPGCTLPCPCDADNTISCHPVTGACTCQPGWSGHHCNES-CP 395
Score = 55 (24.4 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPNECHEFLNHGTCD 346
C T I CPP R GP+C C N G+C+
Sbjct: 553 CLAGWTGIRCDSTCPPGRWGPNCSVSCSCENGGSCSPEDGSCE 595
Score = 47 (21.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 300 SCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
SC C C I+ C C P G C E CP+
Sbjct: 492 SCT--CANGAACSPIDGSCSCTPGWLGDTC-ELPCPD 525
>ZFIN|ZDB-GENE-080506-1 [details] [associations]
symbol:megf10 "multiple EGF-like-domains 10"
species:7955 "Danio rerio" [GO:0030239 "myofibril assembly"
evidence=IMP] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 ZFIN:ZDB-GENE-080506-1
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:CR396586
IPI:IPI00512925 Ensembl:ENSDART00000043936 Uniprot:E9QJQ6
Length = 1119
Score = 193 (73.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 60/190 (31%), Positives = 78/190 (41%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSV-------------NCLCNNHSTC--VHGI 78
C KC++G C P +CQCE GW G DCS C C N + C + G
Sbjct: 106 CAEKCVHGRCVAPN--TCQCEPGWGGADCSSACDRDHWGPHCSSRCQCKNEALCNPITGA 163
Query: 79 GICDE-CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
IC H W D C + +YGN Q KC C ++ C ITGEC+C
Sbjct: 164 CICAPGYHGWRCEDLCDH---STYGNNCQQ----KCLCQNNAT-----CHHITGECVCSP 211
Query: 138 NTQGKNCER-CLPGYYGDPTD-------GGTCYYQCMARGMLTGPGPQGLGSGLAERNAW 189
G CE C PG +G + GG C++ G + P G+ G
Sbjct: 212 GYTGAFCEDLCPPGKHGQQCEERCPCQNGGVCHH---VTGECSCPAGWGMVCGQPCPTGR 268
Query: 190 EGKDTPSREC 199
GK+ S+EC
Sbjct: 269 FGKNC-SQEC 277
Score = 188 (71.2 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 40/106 (37%), Positives = 52/106 (49%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ--YCRAGSYGNATTQEG 109
QC++G G+ CS C C N + C H G C C TG+ C+ C G YG
Sbjct: 306 QCQVGTYGIGCSQACRCVNGAQCYHVSGAC-LCEQGYTGESCEERICPDGQYGLKCD--- 361
Query: 110 CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYGD 154
RKC CN++ C ++GEC CQ G C E C PG+YG+
Sbjct: 362 -RKCPCNTNNTRS---CHPMSGECSCQSGWSGLYCNETCAPGFYGE 403
Score = 183 (69.5 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 53/146 (36%), Positives = 66/146 (45%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDE- 83
SLC C G P D SC C+ GW GVDCS+NC CN C +G G C+
Sbjct: 450 SLC--SCKNGAICSPIDGSCSCQAGWHGVDCSINCPSGTWGLGCNLSCVCGNG-GACNAL 506
Query: 84 -----CHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQ 136
C GD C Q+C+ G+YG CR +CDC SH + C TG C C
Sbjct: 507 DGKCTCTPGWRGDRCDQHCQDGTYGL-----DCRERCDC-SHADG----CHPSTGHCRCL 556
Query: 137 DNTQGKNCER-CLPGYYGDPTDGGTC 161
G +C+ C G +G P +C
Sbjct: 557 AGWTGIHCDSVCAEGRWG-PNCSLSC 581
Score = 169 (64.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 46/145 (31%), Positives = 64/145 (44%)
Query: 34 CYNKCIYGYCKG--PPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVHGI 78
C +C + G P C+C GWTG+ +CS++C C N ++C
Sbjct: 534 CRERCDCSHADGCHPSTGHCRCLAGWTGIHCDSVCAEGRWGPNCSLSCNCKNSASCSPDE 593
Query: 79 GICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C EC G CQ+ C G +G+ +Q C C H N G C +TG+C C
Sbjct: 594 GAC-ECAPGFRGTTCQHICSPGVFGHRCSQ-ACPHC---VHSN---GPCHHVTGQCECLP 645
Query: 138 NTQGKNC-ERCLPGYYGDPTDGGTC 161
+G C E C G +G GG+C
Sbjct: 646 GFKGALCNEVCPSGKFGKNC-GGSC 669
Score = 169 (64.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 45/113 (39%), Positives = 55/113 (48%)
Query: 37 KCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
KC G+ G Y Q C LG+ G DC C C N + C H G C C G HC+
Sbjct: 728 KCTAGWT-GL--YCTQRCPLGFYGKDCVQACQCENGADCNHISGQCT-CRTGFMGRHCET 783
Query: 96 -CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
C AGSYG GCR+ CDC + NS CD +TG C C +G C++
Sbjct: 784 KCPAGSYGY-----GCRQVCDCLN--NST---CDHMTGTCYCNPGWKGTRCDQ 826
Score = 162 (62.1 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 58/192 (30%), Positives = 82/192 (42%)
Query: 30 NASLCYNKCIYGYC---KGPPDYSCQ---CELGWTGVDCSVNCLCNNHST--CVHGIGIC 81
N + CY+ + G C +G SC+ C G G+ C C CN ++T C G C
Sbjct: 324 NGAQCYH--VSGACLCEQGYTGESCEERICPDGQYGLKCDRKCPCNTNNTRSCHPMSGEC 381
Query: 82 DECHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C +G +C + C G YG A QE CR C + + C S++GECIC +
Sbjct: 382 S-CQSGWSGLYCNETCAPGFYGEAC-QEVCR---CQNGAD-----CHSVSGECICAPGYK 431
Query: 141 GKNCE-RCLPGYYGDPTDGGTCYYQCMAR-GMLTGPGPQGLGSGLAERNAWEGKDTPSRE 198
G +C C PG YG C C + G + P + + + W G D S
Sbjct: 432 GSDCAIACPPGTYGI-----NCTSLCSCKNGAICSP----IDGSCSCQAGWHGVDC-SIN 481
Query: 199 C---LWIIGQSL 207
C W +G +L
Sbjct: 482 CPSGTWGLGCNL 493
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 45/128 (35%), Positives = 58/128 (45%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSV---------NCL----CNNHSTCVHGIGICDECHDW 87
G C P D SCQC GW G DCS NC+ C+N + C G C W
Sbjct: 675 GTCS-PMDGSCQCYPGWIGSDCSQPCPPGQWGPNCIHTCNCHNGAFCSAYDGECKCTAGW 733
Query: 88 TTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE- 145
T G +C Q C G YG Q C C + + C+ I+G+C C+ G++CE
Sbjct: 734 T-GLYCTQRCPLGFYGKDCVQA----CQCENGAD-----CNHISGQCTCRTGFMGRHCET 783
Query: 146 RCLPGYYG 153
+C G YG
Sbjct: 784 KCPAGSYG 791
Score = 161 (61.7 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 43/132 (32%), Positives = 60/132 (45%)
Query: 30 NASLCYNKCIYGYCKGPPDYS--C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECH 85
N +C++ + G C P + C C G G +CS C C+N C G C C
Sbjct: 239 NGGVCHH--VTGECSCPAGWGMVCGQPCPTGRFGKNCSQECQCHNGGICSPSTGQC-VCS 295
Query: 86 DWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKN 143
TG+ CQ C+ G+YG +Q CR C V G C ++G C+C+ G++
Sbjct: 296 SGYTGERCQDQCQVGTYGIGCSQ-ACR-C--------VNGAQCYHVSGACLCEQGYTGES 345
Query: 144 CER--CLPGYYG 153
CE C G YG
Sbjct: 346 CEERICPDGQYG 357
Score = 141 (54.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 39/119 (32%), Positives = 54/119 (45%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
C GY KG D + C G G++C+ C C N + C G C C G C C
Sbjct: 426 CAPGY-KGS-DCAIACPPGTYGINCTSLCSCKNGAICSPIDGSCS-CQAGWHGVDCSINC 482
Query: 97 RAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+G++G GC C C GN G C+++ G+C C +G C++ C G YG
Sbjct: 483 PSGTWGL-----GCNLSCVC---GNG--GACNALDGKCTCTPGWRGDRCDQHCQDGTYG 531
Score = 139 (54.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 39/127 (30%), Positives = 54/127 (42%)
Query: 34 CYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHD-W 87
C++ + G C+ P + C C G G +C +C C N+ TC G C +C+ W
Sbjct: 634 CHH--VTGQCECLPGFKGALCNEVCPSGKFGKNCGGSCTCTNNGTCSPMDGSC-QCYPGW 690
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ER 146
D Q C G +G C CN H + C + GEC C G C +R
Sbjct: 691 IGSDCSQPCPPGQWG-----PNCIHT-CNCHNGAF---CSAYDGECKCTAGWTGLYCTQR 741
Query: 147 CLPGYYG 153
C G+YG
Sbjct: 742 CPLGFYG 748
Score = 70 (29.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 295 TYQIFSCPD--KCPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
TY I C +C C ++ C+C TG C+E ICP+
Sbjct: 311 TYGI-GCSQACRCVNGAQCYHVSGACLCEQGYTGESCEERICPD 353
Score = 60 (26.2 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 300 SCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
SC C N TC ++ C C P G DC + CP
Sbjct: 668 SCT--CTNNGTCSPMDGSCQCYPGWIGSDCSQP-CP 700
Score = 59 (25.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 300 SCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
+CP N C + QC C P G C E +CP+
Sbjct: 623 ACPHCVHSNGPCHHVTGQCECLPGFKGALCNE-VCPS 658
Score = 59 (25.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 312 INNQCV--CPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVHITHGRTL-HYQVD 365
I + C CPP + GP+C C N C + C TG++ T L Y D
Sbjct: 691 IGSDCSQPCPPGQWGPNCIHTCNCHNGAFCSAYDGECKCTAGWTGLYCTQRCPLGFYGKD 750
Query: 366 LIR-CTC 371
++ C C
Sbjct: 751 CVQACQC 757
Score = 56 (24.8 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C C ++ +C+C P G DC CP
Sbjct: 410 RCQNGADCHSVSGECICAPGYKGSDCAIA-CP 440
Score = 51 (23.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNECHEFLNHGTCD 346
+C T I+ VC R GP+C C N + G C+
Sbjct: 554 RCLAGWTGIHCDSVCAEGRWGPNCSLSCNCKNSASCSPDEGACE 597
Score = 50 (22.7 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 318 CPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVH 353
C G DC+E C + CH H C TG+H
Sbjct: 525 CQDGTYGLDCRERCDCSHADGCHPSTGHCRCLAGWTGIH 563
Score = 48 (22.0 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 304 KCPENRTCI--NNQCVCPPRRTGPDCQEE 330
+C C QCVC TG CQ++
Sbjct: 278 QCHNGGICSPSTGQCVCSSGYTGERCQDQ 306
Score = 46 (21.3 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 300 SCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEIC 332
SC C + +C ++ C C P G CQ IC
Sbjct: 580 SC--NCKNSASCSPDEGACECAPGFRGTTCQH-IC 611
>UNIPROTKB|F1MYX9 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0001568 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 CTD:3910 KO:K06241
OMA:QLDDYNA EMBL:DAAA02025880 EMBL:DAAA02025869 EMBL:DAAA02025870
EMBL:DAAA02025871 EMBL:DAAA02025872 EMBL:DAAA02025873
EMBL:DAAA02025874 EMBL:DAAA02025875 EMBL:DAAA02025876
EMBL:DAAA02025877 EMBL:DAAA02025878 EMBL:DAAA02025879
IPI:IPI01003454 RefSeq:NP_001192894.1 UniGene:Bt.33367
ProteinModelPortal:F1MYX9 PRIDE:F1MYX9 Ensembl:ENSBTAT00000011612
GeneID:529670 KEGG:bta:529670 NextBio:20875080 Uniprot:F1MYX9
Length = 1824
Score = 218 (81.8 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 64/186 (34%), Positives = 83/186 (44%)
Query: 37 KCIYGYC----KGPPDYS--CQCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTT 89
KC+ GY +GPP + C C L + + +C N + C IC E +
Sbjct: 112 KCLDGYIGDAIRGPPRFCQPCPCPLPHVA-NFAESCYRKNGAVRC-----ICKENY---A 162
Query: 90 GDHCQYCRAGSYGNATT-QEGCRKCDC--NSHGNSVLGVCDSITGECI-CQDNTQGKNCE 145
G +C+ C G YGN C+KCDC NS N + CD +TG+C C NT G CE
Sbjct: 163 GPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCE 222
Query: 146 RCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAER-NAWEGKDTPS---RECLW 201
RC PGYYGD C C G GP G L E + G D P+ +C+W
Sbjct: 223 RCAPGYYGDARRAKNCA-ACNCGG---GPCDSITGECLEEGFESPTGTDCPTISCDKCIW 278
Query: 202 IIGQSL 207
+ L
Sbjct: 279 DLTDDL 284
Score = 209 (78.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 48/128 (37%), Positives = 65/128 (50%)
Query: 52 QCELGWT---GVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATT- 106
+C+ G+ +C + C CN +S C+ G G+C C TTG+HC+ C G G+A
Sbjct: 66 KCDAGFFFAYSEEC-LPCDCNGNSNECLDGSGLCVHCQRNTTGEHCEKCLDGYIGDAIRG 124
Query: 107 -QEGCRKCDCN-SHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT-DGGTC 161
C+ C C H + C G CIC++N G NCERC PGYYG+P G TC
Sbjct: 125 PPRFCQPCPCPLPHVANFAESCYRKNGAVRCICKENYAGPNCERCAPGYYGNPLLIGSTC 184
Query: 162 YYQCMARG 169
+C G
Sbjct: 185 K-KCDCSG 191
>UNIPROTKB|F1MEG3 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007166 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GO:GO:0002011 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0061304 OMA:EPFYWRL
GO:GO:0005606 GO:GO:0005608 EMBL:DAAA02056788 EMBL:DAAA02056789
EMBL:DAAA02056790 EMBL:DAAA02056791 EMBL:DAAA02056792
IPI:IPI01000434 Ensembl:ENSBTAT00000024169 Uniprot:F1MEG3
Length = 3031
Score = 216 (81.1 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 50/144 (34%), Positives = 66/144 (45%)
Query: 37 KCIYGYCKGP--PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
+C GY P P SC +CS N +C G C C T G HC+
Sbjct: 785 RCADGYYGNPTVPGDSC------VACNCSGNVDLLEPGSCDSVTGECLRCLGNTDGPHCE 838
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
C G YG+A T + CR C+C+ G S+ VC TG C C+ + G+ C++CL GYYG
Sbjct: 839 RCADGFYGDAVTAKNCRACECHGQG-SLSAVCHPETGLCECKPHVTGQRCDQCLYGYYGL 897
Query: 155 PTDGGTCYYQCMARGMLTGPGPQG 178
T G C A + P+G
Sbjct: 898 ETGLGCLPCNCSAGSLSDDCTPEG 921
Score = 189 (71.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 50/135 (37%), Positives = 60/135 (44%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDC-NSHGN 120
V C CNNHS TC G C C TTGDHC C G YG T + C C C +S
Sbjct: 1355 VPCNCNNHSDTCDPETGKCLNCGHNTTGDHCDTCAPGYYGKVTGSASDCSPCTCPHSLPA 1414
Query: 121 SVLGVCDSITGE----C-ICQDNTQGKNCERCLPGYYGDPT-DGGTCYY-QCMARGMLTG 173
S C + G+ C C +G+ CERC GYYG+P G TC C G +
Sbjct: 1415 SYSPTC-ILEGDHDFRCDACFVGYEGQYCERCSSGYYGNPRMPGSTCQRCDCSPHGSVHS 1473
Query: 174 PGPQGLGSGLAERNA 188
+G G + A
Sbjct: 1474 DCDRGSGQCICRPGA 1488
Score = 181 (68.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 53/147 (36%), Positives = 70/147 (47%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
YS Q + G T DC+ + +TC G C C T G C+ C G +G+ +
Sbjct: 942 YSYQ-DGGCTPCDCA-----HTQNTCDPETGEC-VCPPHTRGAACEECADGHWGH-DLEL 993
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMAR 168
GC+ C+C+S G + CD +TG C C+ G+ CE+C PGY G P D C C R
Sbjct: 994 GCQACNCSSVG-AASQRCDVVTGHCRCKPAFGGRTCEQCSPGYKGFP-DCMAC--DCDPR 1049
Query: 169 GML--TGPGPQGLGSGLAERNAWEGKD 193
G L T QGL S E A K+
Sbjct: 1050 GTLADTCDQEQGLCSCAQETGACSCKE 1076
Score = 180 (68.4 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 54/157 (34%), Positives = 71/157 (45%)
Query: 42 YCKGPPDY---SCQ-CELGWTGVD-------CSVNCLCNNHST-C-VHGIGICDECHDWT 88
+C+ P Y SC+ C G+ VD C C C+ H+ C VHG+ C C T
Sbjct: 663 HCECPQGYAGISCESCLPGYYRVDGILFGGICQP-CECHGHAAECDVHGV--CFACQHNT 719
Query: 89 TGDHCQYCRAGSYG--NATTQEGCRKCDC--NSHGNSVLGVCDSITG-ECICQD---NTQ 140
TG+HC+ C G YG + T C+ C C ++ N+ C G E +C
Sbjct: 720 TGEHCERCLPGFYGLPSRGTPGDCQPCACPLSTASNNFSPTCHLDDGDEVVCDQCAPGYM 779
Query: 141 GKNCERCLPGYYGDPT-DGGTCYY-QCMARGMLTGPG 175
G CERC GYYG+PT G +C C L PG
Sbjct: 780 GDWCERCADGYYGNPTVPGDSCVACNCSGNVDLLEPG 816
Score = 167 (63.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 46/152 (30%), Positives = 70/152 (46%)
Query: 31 ASLCYNKCIYGYCKGPPDYS---C-QCELGWTGVDCSVNCL-CNNHSTCVHGIGICDEC- 84
+++C+ + G C+ P + C QC G+ G++ + CL CN C G + D+C
Sbjct: 866 SAVCHPET--GLCECKPHVTGQRCDQCLYGYYGLETGLGCLPCN----CSAG-SLSDDCT 918
Query: 85 ---H----DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
H G+ C C G Y + GC CDC +H + CD TGEC+C
Sbjct: 919 PEGHCLCVPGVAGEKCDRCARGFY--SYQDGGCTPCDC-AHTQNT---CDPETGECVCPP 972
Query: 138 NTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
+T+G CE C G++G + G C + G
Sbjct: 973 HTRGAACEECADGHWGHDLELGCQACNCSSVG 1004
Score = 162 (62.1 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 41/118 (34%), Positives = 55/118 (46%)
Query: 61 DCSVNCLCNNHS-------TCV----HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG 109
DCS C C HS TC+ H CD C G +C+ C +G YGN
Sbjct: 1402 DCSP-CTCP-HSLPASYSPTCILEGDHDFR-CDACFVGYEGQYCERCSSGYYGNPRMPGS 1458
Query: 110 -CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
C++CDC+ HG SV CD +G+CIC+ G C C P + +D +C C+
Sbjct: 1459 TCQRCDCSPHG-SVHSDCDRGSGQCICRPGATGLRCGDCEPRHILVESDCVSCDDDCV 1515
Score = 136 (52.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 32/93 (34%), Positives = 43/93 (46%)
Query: 84 CHDWTTGDHCQYCRAGSY-GNATTQEG---------CRKCDCNSHGNSVLGVCDSITGEC 133
C T G CQ C G + G +G C C+CN+H ++ CD TG+C
Sbjct: 1318 CPPGTAGLSCQDCAPGYHRGKLPEGDGRRPRPLLAPCVPCNCNNHSDT----CDPETGKC 1373
Query: 134 I-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
+ C NT G +C+ C PGYYG T + C
Sbjct: 1374 LNCGHNTTGDHCDTCAPGYYGKVTGSASDCSPC 1406
Score = 53 (23.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 315 QCVCPPRRTGPDCQE 329
+CVCPP G CQ+
Sbjct: 1315 KCVCPPGTAGLSCQD 1329
Score = 44 (20.5 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 313 NNQCVCPPRRTGPDC 327
+ QC+C P TG C
Sbjct: 1479 SGQCICRPGATGLRC 1493
Score = 42 (19.8 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 310 TCINNQCVCP-PRRTGP-DCQEEICPNECHE 338
TC Q +C + TG C+E + +C E
Sbjct: 1055 TCDQEQGLCSCAQETGACSCKENVAGPQCGE 1085
Score = 39 (18.8 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 19/79 (24%), Positives = 28/79 (35%)
Query: 297 QIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHI 354
Q +C ++ C + C C P G C++ C F + CD G
Sbjct: 996 QACNCSSVGAASQRCDVVTGHCRCKPAFGGRTCEQ--CSPGYKGFPDCMACDCDPRG--- 1050
Query: 355 THGRTLHYQVDLIRCTCRQ 373
T T + L C+C Q
Sbjct: 1051 TLADTCDQEQGL--CSCAQ 1067
>UNIPROTKB|F1PR66 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 OMA:QLDDYNA EMBL:AAEX03008620
Ensembl:ENSCAFT00000006483 Uniprot:F1PR66
Length = 1760
Score = 217 (81.4 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 62/176 (35%), Positives = 80/176 (45%)
Query: 37 KCIYGYC----KGPPDYS--CQCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTT 89
KC+ GY +GPP + C C L + + + +C N + C IC E +
Sbjct: 55 KCLDGYIGDSIRGPPRFCQPCPCPLPYVA-NFAESCYRKNGAVRC-----ICKENY---A 105
Query: 90 GDHCQYCRAGSYGNATT-QEGCRKCDC--NSHGNSVLGVCDSITGECI-CQDNTQGKNCE 145
G +C+ C G YGN C+KCDC NS N + CD +TG+C C NT G CE
Sbjct: 106 GPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCE 165
Query: 146 RCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLW 201
RC PGYYGD C C G GP G L E +E T +C+W
Sbjct: 166 RCAPGYYGDARIAKNCAV-CNCGG---GPCDSVTGECLEE--GFE-PPTGCDKCIW 214
Score = 201 (75.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 44/116 (37%), Positives = 60/116 (51%)
Query: 61 DCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATT--QEGCRKCDCN- 116
+C + C+CN +S C+ G G C C TTG+HC+ C G G++ C+ C C
Sbjct: 21 EC-MPCVCNGNSDECLDGSGFCVHCQRNTTGEHCEKCLDGYIGDSIRGPPRFCQPCPCPL 79
Query: 117 SHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT-DGGTCYYQCMARG 169
+ + C G CIC++N G NCERC PGYYG+P G TC +C G
Sbjct: 80 PYVANFAESCYRKNGAVRCICKENYAGPNCERCAPGYYGNPLLIGSTCK-KCDCSG 134
>UNIPROTKB|F1P420 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0032224
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:NCNSFGS EMBL:AADN02049678 EMBL:AADN02049679 EMBL:AADN02049680
EMBL:AADN02049681 EMBL:AADN02049682 EMBL:AADN02049683
EMBL:AADN02049684 EMBL:AADN02049685 EMBL:AADN02049686
EMBL:AADN02049687 EMBL:AADN02049688 EMBL:AADN02049689
EMBL:AADN02049690 EMBL:AADN02049691 EMBL:AADN02049692
EMBL:AADN02049693 EMBL:AADN02049694 EMBL:AADN02049695
EMBL:AADN02049696 EMBL:AADN02049697 EMBL:AADN02049698
EMBL:AADN02049699 EMBL:AADN02049700 EMBL:AADN02049701
EMBL:AADN02049702 EMBL:AADN02049703 EMBL:AADN02049704
EMBL:AADN02049705 EMBL:AADN02049706 EMBL:AADN02049707
IPI:IPI00582275 Ensembl:ENSGALT00000022704 Uniprot:F1P420
Length = 3090
Score = 198 (74.8 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 45/136 (33%), Positives = 67/136 (49%)
Query: 37 KCIYGYCKGP--PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+C GY P P SCQ C+ +D S+ C++ S G C C TTG +C
Sbjct: 809 RCAEGYFGQPLIPGGSCQPCQCN-NNLDFSIPGSCDSLS------GACLICKSGTTGQYC 861
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+ C G +G+A C+ C C+ +G S+ +CDS TG+C C+ N G+ C+ C P +G
Sbjct: 862 ERCADGYFGDALDARNCQPCRCHVNG-SISEICDSQTGQCECKANVIGRQCDTCKPETFG 920
Query: 154 DPTDGGTCYYQCMARG 169
+ G C + G
Sbjct: 921 LQSSRGCVPCNCNSFG 936
Score = 192 (72.6 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 55/178 (30%), Positives = 81/178 (45%)
Query: 7 ISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
+SG+T + + + +C L Y + L C G+ + P + + G C V C
Sbjct: 1332 VSGMTP-QANLIEQCDCPLGY---SGLSCESCSPGFYRLPASHGGRIPSQSLGA-CVV-C 1385
Query: 67 LCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDC----NSHGN 120
C+ HST C +C C T G HC+ C G YG + E C+ C C +S+
Sbjct: 1386 QCHGHSTMCDPKTSVCQNCQHNTAGQHCERCALGFYGIIQGSPEDCQPCACPLSISSNNF 1445
Query: 121 SVLGVCDSITG-ECI-CQDNTQGKNCERCLPGYYGDP-TDGGTCYY-QCMARGMLTGP 174
S V + + C C +G+ CERC PGY G+P T GG+C +C G + P
Sbjct: 1446 SPSCVVEGPSDYRCTACPPGYEGQYCERCSPGYTGNPQTPGGSCQECECDQYGSMPVP 1503
Score = 182 (69.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 38/84 (45%), Positives = 45/84 (53%)
Query: 78 IGICDECHDWTTGDHCQYCRAGSYG-NATTQEG-CRKCDCNSHGNSVLGVCDSITGECI- 134
+ +CD C G C+YC N T G C C C H S CD ITGEC+
Sbjct: 684 VELCD-CPPGYAGTSCEYCWPQHRRVNGTIFGGVCTPCTCFGHAES----CDDITGECLD 738
Query: 135 CQDNTQGKNCERCLPGYYGDPTDG 158
C+ NT G C+RCLPG+YGDPT G
Sbjct: 739 CKHNTGGSYCDRCLPGFYGDPTKG 762
Score = 173 (66.0 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 49/160 (30%), Positives = 64/160 (40%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG 102
CK P + Q G V C+ N + C G G C C TG C C G Y
Sbjct: 914 CK-PETFGLQSSRGC--VPCNCNSFGSKSFDC-DGNGQC-YCQPGVTGKKCDRCAHGFYN 968
Query: 103 NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY 162
+ GC C C+ GN+ CD ++G CIC NT G+ C++C P ++G G
Sbjct: 969 --FEEGGCTPCACSQFGNN----CDPVSGRCICPPNTIGEMCDKCAPNHWGHDIVHGCKP 1022
Query: 163 YQCMARGMLTGPGPQGLGSGLAERNAWEG-KDTPSRECLW 201
C G L+ G R + G K T R W
Sbjct: 1023 CDCSLIGALSAQCDLNTGCCFC-RPEFSGDKCTECRSGYW 1061
Score = 163 (62.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/146 (34%), Positives = 62/146 (42%)
Query: 43 CKGPPDYS-CQCELGWT----------GVDCSVNCLCNNHS-TCVHGIGICDECHDWTTG 90
C PP Y+ CE W G C+ C C H+ +C G C +C T G
Sbjct: 687 CDCPPGYAGTSCEYCWPQHRRVNGTIFGGVCTP-CTCFGHAESCDDITGECLDCKHNTGG 745
Query: 91 DHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVC--DSITGECICQD---NTQG 141
+C C G YG+ T T E C+ C C N N+ C D G IC + G
Sbjct: 746 SYCDRCLPGFYGDPTKGTAEDCQLCACPLNIPSNNFSPTCHFDQSHG-LICDECPVGYVG 804
Query: 142 KNCERCLPGYYGDPT-DGGTCY-YQC 165
CERC GY+G P GG+C QC
Sbjct: 805 PRCERCAEGYFGQPLIPGGSCQPCQC 830
Score = 149 (57.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 37/129 (28%), Positives = 55/129 (42%)
Query: 40 YGYCKGPPD--YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
YG +G P+ C C L + + S +C+ S C C G +C+ C
Sbjct: 1421 YGIIQGSPEDCQPCACPLSISSNNFSPSCVVEGPSDYR-----CTACPPGYEGQYCERCS 1475
Query: 98 AGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
G GN T G C++C+C+ +G+ + CD TG C C+ G C C Y D
Sbjct: 1476 PGYTGNPQTPGGSCQECECDQYGSMPVP-CDPATGVCTCKPGFTGWKCAGCEHRYARDGM 1534
Query: 157 DGGTCYYQC 165
+C +C
Sbjct: 1535 KCISCDDEC 1543
Score = 142 (55.0 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 42/143 (29%), Positives = 64/143 (44%)
Query: 38 CIYGYC--KGP-PDYSCQCELGWTGVDCSVNCLCNNHSTCV----HGIG--ICDECHDWT 88
C+ GY KG PD C+ CS + + H TCV H G + CH T
Sbjct: 355 CVDGYFRPKGVLPDSPDPCQ------PCSCDPNGSLHETCVKDEKHAEGDMLPGFCHCKT 408
Query: 89 --TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
G+HC C G Y T C C+C+ G++ + C G C+C+++ +G+NC+R
Sbjct: 409 GYAGEHCSRCALG-Y---TGYPDCLPCNCSVEGSANIDPC---VGLCVCKEHVEGENCDR 461
Query: 147 CLPGYYGDPTDGGTCYYQCMARG 169
C G++ + +C G
Sbjct: 462 CKSGFFNLQQNNPKGCEECFCSG 484
Score = 130 (50.8 bits), Expect = 0.00022, P = 0.00022
Identities = 42/130 (32%), Positives = 57/130 (43%)
Query: 61 DCS-VNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHG 119
DCS + L + C G C C +GD C CR+G Y N C C C G
Sbjct: 1024 DCSLIGALS---AQCDLNTGCCF-CRPEFSGDKCTECRSG-YWNYPQ---CIACQCVLSG 1075
Query: 120 NSV------LGVCDSI--TGECICQDNTQGKNCERCLPGYYG----DPTDGGTCYY---- 163
LG C + TG+C C+ N +G +C+RC G +G +P +CY
Sbjct: 1076 TDPRSCETDLGTCSCVNHTGQCSCKVNVEGVHCDRCKSGTFGLSARNPLGCSSCYCFGLT 1135
Query: 164 -QCM-ARGML 171
QC ARG++
Sbjct: 1136 TQCSEARGLI 1145
Score = 110 (43.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/86 (29%), Positives = 41/86 (47%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGV-DC-SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
C GY G ++ +C LG+TG DC NC + +G+C C + G++C
Sbjct: 406 CKTGYA-G--EHCSRCALGYTGYPDCLPCNCSVEGSANIDPCVGLC-VCKEHVEGENCDR 461
Query: 96 CRAGSYG-NATTQEGCRKCDCNSHGN 120
C++G + +GC +C C+ N
Sbjct: 462 CKSGFFNLQQNNPKGCEECFCSGKTN 487
Score = 73 (30.8 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 289 SEGFNATYQIFSC-PDKCPE-NRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGT 344
+ GF ++ C P C + C ++ +C+CPP G C ++ PN + HG
Sbjct: 963 AHGFY-NFEEGGCTPCACSQFGNNCDPVSGRCICPPNTIGEMC-DKCAPNHWGHDIVHGC 1020
Query: 345 --CDLLLTG 351
CD L G
Sbjct: 1021 KPCDCSLIG 1029
Score = 53 (23.7 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQ 363
+C N C C C P +G C E C + + C +L+G T R+ +
Sbjct: 1034 QCDLNTGC----CFCRPEFSGDKCTE--CRSGYWNYPQCIACQCVLSG---TDPRSC--E 1082
Query: 364 VDLIRCTC 371
DL C+C
Sbjct: 1083 TDLGTCSC 1090
>UNIPROTKB|E1C393 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0014719 "satellite cell activation" evidence=IEA] [GO:0014816
"satellite cell differentiation" evidence=IEA] [GO:0014841
"satellite cell proliferation" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IEA] [GO:0043654 "recognition of
apoptotic cell" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0051147 "regulation of
muscle cell differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0034109
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0051147 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AADN02073828 EMBL:AADN02073829
EMBL:AADN02073830 IPI:IPI00580976 ProteinModelPortal:E1C393
Ensembl:ENSGALT00000023694 Uniprot:E1C393
Length = 1132
Score = 194 (73.4 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 59/177 (33%), Positives = 81/177 (45%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGIGICDE--- 83
C +KC++G C P +CQCE GW G +CS C C++ C +G +C+
Sbjct: 109 CADKCVHGRCIAPN--TCQCEPGWGGPNCSSACDSDHWGPHCSSRCQCKNG-ALCNPITG 165
Query: 84 -CH--DWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CH G C+ C G+YGN Q KC C + G CD +TGEC C
Sbjct: 166 ACHCASGFKGWRCEERCDQGTYGNDCHQ----KCQCQN-G----ATCDHVTGECRCPPGY 216
Query: 140 QGKNCER-CLPGYYGDPTD-------GGTCYY---QC------MARGMLTG-PGPQG 178
G CE C PG +G + GG C++ +C M +GM+ G P P+G
Sbjct: 217 TGAFCEDLCPPGKHGPQCEERCPCQNGGICHHVTGECACPPGWMTQGMVCGQPCPEG 273
Score = 187 (70.9 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 46/132 (34%), Positives = 59/132 (44%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +C + G C P Y+ CQ C +G GV C+ C C N C H G C C
Sbjct: 287 NGGICDSAT--GQCHCSPGYTGERCQDECPVGTYGVRCAETCQCMNGGKCYHISGAC-LC 343
Query: 85 HDWTTGDHCQ--YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
TG+HC+ C G YG +KC C+ H C ++GEC C+ G
Sbjct: 344 EPGYTGEHCETRLCPEGVYGLKCD----KKCPCHLHNT---WSCHPMSGECSCKPGWSGL 396
Query: 143 NC-ERCLPGYYG 153
C E C PG+YG
Sbjct: 397 YCNETCSPGFYG 408
Score = 181 (68.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 48/124 (38%), Positives = 62/124 (50%)
Query: 34 CYNK--C-IY-GYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C+N C Y G CK P ++ C +C LG+ G DC++ C C N + C H G C C
Sbjct: 720 CHNGAYCSAYDGECKCTPGWTGLYCTQRCPLGFYGKDCALICQCRNGADCDHISGQCT-C 778
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G HC Q C G+YG GCR+ CDC + NS CD ITG C C +G
Sbjct: 779 RTGFMGKHCEQKCPQGTYGY-----GCRQICDCLN--NST---CDHITGTCYCSPGWKGA 828
Query: 143 NCER 146
C++
Sbjct: 829 RCDQ 832
Score = 170 (64.9 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 48/144 (33%), Positives = 65/144 (45%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDE--- 83
C N+ I C D SC C+ GW GVDCS+NC CN C++G G C+
Sbjct: 460 CKNEAI---CSSV-DGSCTCKAGWHGVDCSINCPSGTWGLGCNLTCQCLNG-GACNALDG 514
Query: 84 ---CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C G+ C+ C+ G+YG + +CDC SH + C TG C C
Sbjct: 515 TCTCAPGWRGEKCELPCQDGTYG----MDCAERCDC-SHADG----CHPTTGYCRCLPGW 565
Query: 140 QGKNCER-CLPGYYGDPTDGGTCY 162
G +C+ C G +G P +CY
Sbjct: 566 SGIHCDSVCAEGQWG-PNCSLSCY 588
Score = 168 (64.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 46/134 (34%), Positives = 62/134 (46%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ---CELGWTGVDCSVNCLCNNHST--CVHGIGIC 81
N CY+ I G C P Y+ C+ C G G+ C C C+ H+T C G C
Sbjct: 330 NGGKCYH--ISGACLCEPGYTGEHCETRLCPEGVYGLKCDKKCPCHLHNTWSCHPMSGEC 387
Query: 82 DECHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C +G +C + C G YG + Q C C + + CDS+TG+CIC +
Sbjct: 388 S-CKPGWSGLYCNETCSPGFYGKSCQQI----CSCQNGAD-----CDSVTGKCICASGFK 437
Query: 141 GKNCER-CLPGYYG 153
G +C CLPG YG
Sbjct: 438 GADCGTPCLPGTYG 451
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 47/129 (36%), Positives = 60/129 (46%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSV---------NCL----CNNHSTCVHGIGICDECHDW 87
G C P D SCQC GW G DCS NC+ C+N + C G C +C
Sbjct: 681 GTCN-PIDRSCQCYPGWIGSDCSQPCPPSHWGPNCIHTCNCHNGAYCSAYDGEC-KCTPG 738
Query: 88 TTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
TG +C Q C G YG + C C C + + CD I+G+C C+ GK+CE
Sbjct: 739 WTGLYCTQRCPLGFYG-----KDCALICQCRNGAD-----CDHISGQCTCRTGFMGKHCE 788
Query: 146 -RCLPGYYG 153
+C G YG
Sbjct: 789 QKCPQGTYG 797
Score = 164 (62.8 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 47/134 (35%), Positives = 61/134 (45%)
Query: 30 NASLCYNKCIYGYC---KGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC N I G C G + C+ C+ G G DC C C N +TC H G C C
Sbjct: 156 NGALC-NP-ITGACHCASGFKGWRCEERCDQGTYGNDCHQKCQCQNGATCDHVTGEC-RC 212
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN--TQG 141
TG C+ C G +G + +C C + G G+C +TGEC C TQG
Sbjct: 213 PPGYTGAFCEDLCPPGKHGPQCEE----RCPCQN-G----GICHHVTGECACPPGWMTQG 263
Query: 142 KNC-ERCLPGYYGD 154
C + C G YG+
Sbjct: 264 MVCGQPCPEGRYGN 277
Score = 162 (62.1 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 48/135 (35%), Positives = 61/135 (45%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
GYC+ P +S C C G G +CS++C C N ++C GIC EC G CQ
Sbjct: 557 GYCRCLPGWSGIHCDSVCAEGQWGPNCSLSCYCKNGASCSPDDGIC-ECAPGYRGTTCQR 615
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYG 153
C G YG+ +Q C +C H + G C ITG C C G C E C G +G
Sbjct: 616 ICSPGFYGHRCSQT-CPQC---VHSS---GPCHHITGLCDCLPGFTGALCNEVCPSGRFG 668
Query: 154 DP-------TDGGTC 161
T+ GTC
Sbjct: 669 KNCIGICTCTNNGTC 683
Score = 161 (61.7 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 42/134 (31%), Positives = 58/134 (43%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQ-------CELGWTGVDCSVNCLCNNHSTCVHGIGICD 82
N +C++ + G C PP + Q C G G +CS C C+N C G C
Sbjct: 242 NGGICHH--VTGECACPPGWMTQGMVCGQPCPEGRYGNNCSQECQCHNGGICDSATGQC- 298
Query: 83 ECHDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
C TG+ CQ C G+YG + C C + G C I+G C+C+ G
Sbjct: 299 HCSPGYTGERCQDECPVGTYGVRCAET----CQCMNGGK-----CYHISGACLCEPGYTG 349
Query: 142 KNCER--CLPGYYG 153
++CE C G YG
Sbjct: 350 EHCETRLCPEGVYG 363
Score = 131 (51.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 46/140 (32%), Positives = 59/140 (42%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
C G+ KG D C G GV+CS C C N + C G C C G C C
Sbjct: 432 CASGF-KGA-DCGTPCLPGTYGVNCSSVCNCKNEAICSSVDGSCT-CKAGWHGVDCSINC 488
Query: 97 RAGSYGNATTQEGCR-KCDCNSHG--NSVLGVCDSITG------ECICQDNTQGKNC-ER 146
+G++G GC C C + G N++ G C G E CQD T G +C ER
Sbjct: 489 PSGTWGL-----GCNLTCQCLNGGACNALDGTCTCAPGWRGEKCELPCQDGTYGMDCAER 543
Query: 147 CLPGYYGDPTDGGTCYYQCM 166
C + D T Y +C+
Sbjct: 544 C-DCSHADGCHPTTGYCRCL 562
Score = 130 (50.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 49/148 (33%), Positives = 64/148 (43%)
Query: 30 NASL-CYNK----CIY--GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHST--CV 75
N SL CY K C G C+ P Y +CQ C G+ G CS C HS+ C
Sbjct: 582 NCSLSCYCKNGASCSPDDGICECAPGYRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCH 641
Query: 76 HGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
H G+CD C TG C + C +G +G G C C ++G C+ I C
Sbjct: 642 HITGLCD-CLPGFTGALCNEVCPSGRFGKNCI--GI--CTCTNNGT-----CNPIDRSCQ 691
Query: 135 CQDNTQGKNCER-CLPGYYGDPTDGGTC 161
C G +C + C P ++G P TC
Sbjct: 692 CYPGWIGSDCSQPCPPSHWG-PNCIHTC 718
Score = 120 (47.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 38/133 (28%), Positives = 55/133 (41%)
Query: 28 IFNASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICD 82
+ ++ C++ I G C P ++ C C G G +C C C N+ TC + I
Sbjct: 634 VHSSGPCHH--ITGLCDCLPGFTGALCNEVCPSGRFGKNCIGICTCTNNGTC-NPIDRSC 690
Query: 83 ECHD-WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
+C+ W D Q C +G C CN H + C + GEC C G
Sbjct: 691 QCYPGWIGSDCSQPCPPSHWG-----PNCIHT-CNCHNGAY---CSAYDGECKCTPGWTG 741
Query: 142 KNC-ERCLPGYYG 153
C +RC G+YG
Sbjct: 742 LYCTQRCPLGFYG 754
Score = 110 (43.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 40/144 (27%), Positives = 56/144 (38%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ--YCRAGSYGNATTQEG 109
+C +G GV C+ C C N C H G C C TG+HC+ C G YG ++
Sbjct: 312 ECPVGTYGVRCAETCQCMNGGKCYHISGAC-LCEPGYTGEHCETRLCPEGVYGLKCDKK- 369
Query: 110 CRKCDCNSHGNS--VLGVCDSITG----EC--ICQDNTQGKNCERCLPGYYGDPTDG--G 159
C C ++ + + G C G C C GK+C++ G D G
Sbjct: 370 C-PCHLHNTWSCHPMSGECSCKPGWSGLYCNETCSPGFYGKSCQQICSCQNGADCDSVTG 428
Query: 160 TCYYQCMARGMLTG----PGPQGL 179
C +G G PG G+
Sbjct: 429 KCICASGFKGADCGTPCLPGTYGV 452
Score = 104 (41.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 36/126 (28%), Positives = 48/126 (38%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ-YCRAGSYG-----NAT 105
+C+ G G DC C C N +TC H G C C TG C+ C G +G
Sbjct: 181 RCDQGTYGNDCHQKCQCQNGATCDHVTGEC-RCPPGYTGAFCEDLCPPGKHGPQCEERCP 239
Query: 106 TQEG--CR----KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
Q G C +C C G G+ + G+ C + G NC + + G D
Sbjct: 240 CQNGGICHHVTGECACPP-GWMTQGM---VCGQP-CPEGRYGNNCSQECQCHNGGICDSA 294
Query: 160 TCYYQC 165
T C
Sbjct: 295 TGQCHC 300
Score = 67 (28.6 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 295 TYQIFSCPD--KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
TY + C + +C C I+ C+C P TG C+ +CP
Sbjct: 317 TYGV-RCAETCQCMNGGKCYHISGACLCEPGYTGEHCETRLCP 358
Score = 62 (26.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C N TC I+ C C P G DC + CP
Sbjct: 677 CTNNGTCNPIDRSCQCYPGWIGSDCSQP-CP 706
Score = 61 (26.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 18/56 (32%), Positives = 23/56 (41%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTG--VHIT 355
+C C QC C P TG CQ+E CP + TC + G HI+
Sbjct: 284 QCHNGGICDSATGQCHCSPGYTGERCQDE-CPVGTYGVRCAETCQCMNGGKCYHIS 338
Score = 59 (25.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNE-----CHEF---LNHGTCDLLLTG 351
+C C I+ QC C G C+++ CP C + LN+ TCD + TG
Sbjct: 762 QCRNGADCDHISGQCTCRTGFMGKHCEQK-CPQGTYGYGCRQICDCLNNSTCDHI-TG 817
Score = 56 (24.8 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 21/68 (30%), Positives = 27/68 (39%)
Query: 289 SEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEFL- 340
S GF +CP + C I C C P TG C E +CP+ C
Sbjct: 618 SPGFYGHRCSQTCPQCVHSSGPCHHITGLCDCLPGFTGALCNE-VCPSGRFGKNCIGICT 676
Query: 341 --NHGTCD 346
N+GTC+
Sbjct: 677 CTNNGTCN 684
Score = 55 (24.4 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCP--ENRTC--INNQCVCPPRRTGPDCQE 329
++G M H +Q P +G TY + C C N TC I C C P G C +
Sbjct: 779 RTGFMGKHCEQKCP-QG---TYG-YGCRQICDCLNNSTCDHITGTCYCSPGWKGARCDQ 832
Score = 51 (23.0 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 19/64 (29%), Positives = 26/64 (40%)
Query: 301 CPDKCP---ENR-TC--INNQCVCPPRRTGPDCQEEICPN----ECHEFL---NHGTCDL 347
C KCP N +C ++ +C C P +G C E P C + N CD
Sbjct: 366 CDKKCPCHLHNTWSCHPMSGECSCKPGWSGLYCNETCSPGFYGKSCQQICSCQNGADCDS 425
Query: 348 LLTG 351
+ TG
Sbjct: 426 V-TG 428
Score = 45 (20.9 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 298 IFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
I +C C C + +C C P TG C + CP
Sbjct: 715 IHTC--NCHNGAYCSAYDGECKCTPGWTGLYCTQR-CP 749
Score = 44 (20.5 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 289 SEGF--NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICP 333
S GF + QI SC + + + +C+C G DC P
Sbjct: 403 SPGFYGKSCQQICSCQNGA--DCDSVTGKCICASGFKGADCGTPCLP 447
Score = 42 (19.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 305 CPENRTCINNQ--CVCPPRRTGPDCQEEIC 332
C +C + C C P G CQ IC
Sbjct: 589 CKNGASCSPDDGICECAPGYRGTTCQR-IC 617
Score = 40 (19.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 15/57 (26%), Positives = 20/57 (35%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLL-LTGVHITHG 357
+C C ++ C C P G C E C + + CD G H T G
Sbjct: 502 QCLNGGACNALDGTCTCAPGWRGEKC-ELPCQDGTYGMDCAERCDCSHADGCHPTTG 557
Score = 39 (18.8 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNECHEFLNHGTCD 346
+C + I+ VC + GP+C C N + G C+
Sbjct: 560 RCLPGWSGIHCDSVCAEGQWGPNCSLSCYCKNGASCSPDDGICE 603
>ZFIN|ZDB-GENE-090312-12 [details] [associations]
symbol:megf6a "multiple EGF-like-domains 6a"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-090312-12 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 EMBL:CR354562 EMBL:CT027543
EMBL:CT027552 IPI:IPI00901902 ProteinModelPortal:E7FFP9
Ensembl:ENSDART00000112424 Bgee:E7FFP9 Uniprot:E7FFP9
Length = 1513
Score = 195 (73.7 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 66/182 (36%), Positives = 81/182 (44%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDE-- 83
LC N G C + C C GWTGV C + C C + CV+G G+CD
Sbjct: 997 LCQNG---GSCDRISGH-CTCVSGWTGVACELECAAGHFGMDCQHKCECVNG-GVCDRHS 1051
Query: 84 ----CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
C TG HC+ C G YG +E CR CD N+ C ITG C+C
Sbjct: 1052 GRCLCPAGWTGTHCETACTQGFYGPGC-KERCR-CDHNA-------ACHHITGTCLCPAG 1102
Query: 139 TQGKNCER-CLPGYYGDPTDGGTCYYQCMA-RGM----LTGP-G-PQGL-GSGLAERNAW 189
+G +CE+ CLPG YG C ++C G +TG G P GL GSG ER
Sbjct: 1103 WRGTHCEKVCLPGSYGK-----RCAHRCQCPHGTSCNHVTGQCGCPAGLTGSG-CERMCQ 1156
Query: 190 EG 191
G
Sbjct: 1157 SG 1158
Score = 175 (66.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 51/144 (35%), Positives = 65/144 (45%)
Query: 34 CYN--KC--IYGYCKGP-----PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C N +C + G C+ P P + CE G G CS C C+N+ TC G C EC
Sbjct: 912 CLNGGRCHPVTGGCQCPSGWVGPVCNATCEAGTFGPACSQTCRCHNNGTCDPADGRC-EC 970
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
TG C Q C AG YG GC + C C + G+ CD I+G C C G
Sbjct: 971 GAGWTGSSCEQECSAGLYG-----VGCNQHCLCQNGGS-----CDRISGHCTCVSGWTGV 1020
Query: 143 NCE-RCLPGYYGDPTDGGTCYYQC 165
CE C G++G D C ++C
Sbjct: 1021 ACELECAAGHFG--MD---CQHKC 1039
Score = 172 (65.6 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 47/144 (32%), Positives = 65/144 (45%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +C + G C P + CQ C G G+ C + C C N C H G+C C
Sbjct: 741 NGGVCDRQ--NGTCVCSPGFMGNLCQNVCPDGHFGLSCLLRCSCQNEGKCHHVTGLC-VC 797
Query: 85 HDWTTGDHC-QYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
D G +C + C AG +G N Q CDC S SV G CD + G C C+ G
Sbjct: 798 KDGWMGPNCAKACVAGRWGPNCANQ-----CDCRS---SV-GSCDPVIGLCHCEAGYMGP 848
Query: 143 NCE-RCLPGYYGDPTDGGTCYYQC 165
C+ +C G++G +C ++C
Sbjct: 849 RCDQKCPQGFFGQ-----SCQHRC 867
Score = 164 (62.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 58/206 (28%), Positives = 82/206 (39%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
G C P ++ C+ C G+ G C C C++++ C H G C C G HC+
Sbjct: 1052 GRCLCPAGWTGTHCETACTQGFYGPGCKERCRCDHNAACHHITGTC-LCPAGWRGTHCEK 1110
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
C GSYG +C C HG S C+ +TG+C C G CER C G +G
Sbjct: 1111 VCLPGSYGKRCAH----RCQC-PHGTS----CNHVTGQCGCPAGLTGSGCERMCQSGTFG 1161
Query: 154 DPTDGGTCYYQCMARGMLTGP-------GPQGLGSGLAERNAWEGKDTPS--RECLWIIG 204
+ C QC L P P GS E G+ P+ +EC +
Sbjct: 1162 VNCNQ-VC--QCSELNQLCHPVTGVCYCAPGYYGSK-CETECEAGRYGPNCEQECQ-CLN 1216
Query: 205 QSLDSNSTAPADIILLRLQPDINVPC 230
+ +ST + P+ N+ C
Sbjct: 1217 NGVCKSSTGTCSCPPGFIGPNCNITC 1242
Score = 163 (62.4 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 49/148 (33%), Positives = 65/148 (43%)
Query: 30 NASLCYNKCIYGYCK---GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +C + G+C G +C+ C G G DCS C C N+STC G+C C
Sbjct: 1302 NGGVC--DALTGHCSCTLGWTGDTCEEVCPRGRYGSDCSEVCDCKNNSTCDRVTGVC-LC 1358
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G CQ+ C G +G+ C+ CDC ++ CD TG C+C QG
Sbjct: 1359 SPGFYGHLCQHACPVGFHGHR-----CQLLCDCGANAP-----CDPETGRCLCPAGYQGL 1408
Query: 143 NCER-CLPGYYGDPTDGGTCYYQCMARG 169
CER C G T G C ++C G
Sbjct: 1409 RCERECELG-----TFGADCVHRCDCDG 1431
Score = 160 (61.4 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 36/103 (34%), Positives = 48/103 (46%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ-YCRAGSYGNATTQEGCR 111
C GW G +C C C+N C G C WT GD C+ C G YG+ ++
Sbjct: 1285 CAEGWFGENCDQRCNCSNGGVCDALTGHCSCTLGWT-GDTCEEVCPRGRYGSDCSEV--- 1340
Query: 112 KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GYYG 153
CDC + NS CD +TG C+C G C+ P G++G
Sbjct: 1341 -CDCKN--NST---CDRVTGVCLCSPGFYGHLCQHACPVGFHG 1377
Score = 159 (61.0 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 55/186 (29%), Positives = 74/186 (39%)
Query: 30 NASLCYNKCIYG-YCKGPPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCV 75
+ SL + C G YC D +C C GWTG+ +CS C C N TC
Sbjct: 469 DCSLTCDDCSNGGYCNAEGD-ACDCPDGWTGILCNQTCPEGTFGKNCSFTCKCRNGGTCD 527
Query: 76 HGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
G C C GD CQ C G YG +KC+C ++G C G C+
Sbjct: 528 PISGKC-RCPPGVNGDLCQDGCPKGMYGKHCN----KKCNCANNGR-----CHRTYGACL 577
Query: 135 CQDNTQGKNCERCLPGY-YGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKD 193
C G+ C P + YG G + QC+ + L G + ++GK
Sbjct: 578 CDPGLYGRFCHLPCPKWSYGS---GCSSECQCVQQNTLECHRRHGT---CVCKPGYQGK- 630
Query: 194 TPSREC 199
T +REC
Sbjct: 631 TCNREC 636
Score = 155 (59.6 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 45/130 (34%), Positives = 60/130 (46%)
Query: 37 KCIY-GYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC--HDWTTGDHC 93
+C+ G CK +C C G+ G +C++ C + G+ +C E D TG C
Sbjct: 1213 QCLNNGVCKSSTG-TCSCPPGFIGPNCNITCPLGRYGQDCAGVSLCGEGARSDPLTG-RC 1270
Query: 94 QYCRAGSYGNATTQEGCRK------CD--CN-SHGNSVLGVCDSITGECICQDNTQGKNC 144
CRAG G +GC + CD CN S+G GVCD++TG C C G C
Sbjct: 1271 -VCRAGQRGR-DCGKGCAEGWFGENCDQRCNCSNG----GVCDALTGHCSCTLGWTGDTC 1324
Query: 145 ERCLP-GYYG 153
E P G YG
Sbjct: 1325 EEVCPRGRYG 1334
Score = 154 (59.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 54/174 (31%), Positives = 72/174 (41%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDH 92
+ G C P + C+ C+ G GV+C+ C C+ + H + G+C C G
Sbjct: 1136 VTGQCGCPAGLTGSGCERMCQSGTFGVNCNQVCQCSELNQLCHPVTGVC-YCAPGYYGSK 1194
Query: 93 CQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-G 150
C+ C AG YG QE C C ++G VC S TG C C G NC P G
Sbjct: 1195 CETECEAGRYGPNCEQE----CQCLNNG-----VCKSSTGTCSCPPGFIGPNCNITCPLG 1245
Query: 151 YYGDPTDGGTCYYQCMARGMLTG-----PGPQG--LGSGLAERNAWEGKDTPSR 197
YG G + + LTG G +G G G AE W G++ R
Sbjct: 1246 RYGQDCAGVSLCGEGARSDPLTGRCVCRAGQRGRDCGKGCAE--GWFGENCDQR 1297
Score = 150 (57.9 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 40/132 (30%), Positives = 60/132 (45%)
Query: 30 NASLCYNKCIYGYCKGPPDY---SC--QCELGWTGVDCSVNCLCNNHSTCVHGIGICD-E 83
N C+ + +G C P Y +C +C+ G+ G C + C C +C G C +
Sbjct: 610 NTLECHRR--HGTCVCKPGYQGKTCNRECDSGFYGPGCRLKCQCPAGVSCHPMSGQCQRQ 667
Query: 84 CHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C G+HC + C G +G TQ CDC C+S+TG+C C G+
Sbjct: 668 CPAGLHGEHCDRECPMGQFGVGCTQF----CDCKG------APCNSVTGKCHCPAGQTGQ 717
Query: 143 NCER-CLPGYYG 153
+CE+ C G +G
Sbjct: 718 HCEKECEEGRWG 729
Score = 146 (56.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 45/139 (32%), Positives = 56/139 (40%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDH 92
LC+ C GY GP +C G+ G C C C N + C H G C WT G +
Sbjct: 838 LCH--CEAGYM-GPR-CDQKCPQGFFGQSCQHRCQCENGAVCEHVSGACTCLAGWT-GTY 892
Query: 93 CQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPG 150
C+ C G +G Q KC C + G C +TG C C G C C G
Sbjct: 893 CEKPCPEGFHGLECQQ----KCQCLNGGR-----CHPVTGGCQCPSGWVGPVCNATCEAG 943
Query: 151 YYGDPTDGGTCYYQCMARG 169
+G P TC +C G
Sbjct: 944 TFG-PACSQTC--RCHNNG 959
Score = 143 (55.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 35/104 (33%), Positives = 46/104 (44%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGC 110
+C +G GV C+ C C + C G C C TG HC+ C G +G E C
Sbjct: 680 ECPMGQFGVGCTQFCDCKG-APCNSVTGKC-HCPAGQTGQHCEKECEEGRWGLGCA-ESC 736
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GYYG 153
CD +G GVCD G C+C G C+ P G++G
Sbjct: 737 PSCD---NG----GVCDRQNGTCVCSPGFMGNLCQNVCPDGHFG 773
Score = 129 (50.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 38/105 (36%), Positives = 47/105 (44%)
Query: 53 CELGWTGVDCSVNCL-CNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGC 110
C G G DCS+ C C+N C CD C D TG C Q C G++G + C
Sbjct: 461 CLNGTFGHDCSLTCDDCSNGGYCNAEGDACD-CPDGWTGILCNQTCPEGTFG-----KNC 514
Query: 111 R-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
C C + G G CD I+G+C C G C+ C G YG
Sbjct: 515 SFTCKCRN-G----GTCDPISGKCRCPPGVNGDLCQDGCPKGMYG 554
Score = 122 (48.0 bits), Expect = 0.00074, P = 0.00074
Identities = 35/114 (30%), Positives = 47/114 (41%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C P Y C+ CELG G DC C C+ + C G C C TG C
Sbjct: 1397 GRCLCPAGYQGLRCERECELGTFGADCVHRCDCDGDTPCDPINGRC-LCAPGKTGSRCDI 1455
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL 148
C +G +Q +C+C + G CD G C C + G +C++ L
Sbjct: 1456 GCGVNRFGPDCSQ----RCECLNGGQ-----CDPRNGRCTCLNGWIGPSCQQGL 1500
Score = 115 (45.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 35/105 (33%), Positives = 44/105 (41%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGC 110
+C G GV C+ +CLC N +C G C WT G C+ C AG +G Q C
Sbjct: 982 ECSAGLYGVGCNQHCLCQNGGSCDRISGHCTCVSGWT-GVACELECAAGHFG-MDCQHKC 1039
Query: 111 RKCD---CNSHGNSVLGVCDS-ITG---ECICQDNTQGKNC-ERC 147
+ C+ H L C + TG E C G C ERC
Sbjct: 1040 ECVNGGVCDRHSGRCL--CPAGWTGTHCETACTQGFYGPGCKERC 1082
Score = 113 (44.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 37/122 (30%), Positives = 50/122 (40%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICD-ECHDWTTGDHC-QYCRAGSYGNATTQE- 108
+C+ G+ G C + C C +C G C +C G+HC + C G +G TQ
Sbjct: 635 ECDSGFYGPGCRLKCQCPAGVSCHPMSGQCQRQCPAGLHGEHCDRECPMGQFGVGCTQFC 694
Query: 109 GCRKCDCNSHGNSVLGVCDSITGE----CI--CQDNTQGKNC-ERCLPGYYGDPTD--GG 159
C+ CNS V G C G+ C C++ G C E C G D G
Sbjct: 695 DCKGAPCNS----VTGKCHCPAGQTGQHCEKECEEGRWGLGCAESCPSCDNGGVCDRQNG 750
Query: 160 TC 161
TC
Sbjct: 751 TC 752
Score = 104 (41.7 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 47/146 (32%), Positives = 63/146 (43%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDE-CHDWTTGDH 92
C ++C +G GP C C G+ + CL + C G C++ C ++ G
Sbjct: 292 CSHRCQHGVL-GPV---CSCNHGYQLAEDLKTCL--DLEECEEGTSCCEQDCTNYPGGYE 345
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK-NCERCLPGY 151
C YCRAG NA +GC CD S G C E CQ NT G +C C GY
Sbjct: 346 C-YCRAGYRLNA---DGCG-CDDVDECASDRGGC-----EHTCQ-NTAGSYHCF-CRFGY 393
Query: 152 -YGDPTDGGTCYYQCMARGMLTGPGP 176
G+ D +C + R + PGP
Sbjct: 394 RLGE--DRHSCI--SLQRSVEELPGP 415
Score = 77 (32.2 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 299 FSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTG-VHIT 355
F+C KC TC I+ +C CPP G CQ+ CP + + C+ G H T
Sbjct: 516 FTC--KCRNGGTCDPISGKCRCPPGVNGDLCQDG-CPKGMYGKHCNKKCNCANNGRCHRT 572
Query: 356 HGRTL 360
+G L
Sbjct: 573 YGACL 577
Score = 67 (28.6 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 20/58 (34%), Positives = 26/58 (44%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP-----NECHEFL---NHGTCDLLLTGV 352
C C + C C TG C EE+CP ++C E N+ TCD + TGV
Sbjct: 1300 CSNGGVCDALTGHCSCTLGWTGDTC-EEVCPRGRYGSDCSEVCDCKNNSTCDRV-TGV 1355
Score = 66 (28.3 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 18/52 (34%), Positives = 22/52 (42%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHGTCD 346
C + C IN +C+C P +TG C C C E LN G CD
Sbjct: 1429 CDGDTPCDPINGRCLCAPGKTGSRCDIGCGVNRFGPDCSQRC-ECLNGGQCD 1479
Score = 64 (27.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEIC 332
+CP +C + QC CP TG C E +C
Sbjct: 1126 QCPHGTSCNHVTGQCGCPAGLTGSGC-ERMC 1155
Score = 64 (27.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 300 SCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPN 334
SCP C C N CVC P G CQ +CP+
Sbjct: 735 SCPS-CDNGGVCDRQNGTCVCSPGFMGNLCQN-VCPD 769
Score = 61 (26.5 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 304 KCPE-NRTC--INNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHGTC 345
+C E N+ C + C C P G C+ E C EC + LN+G C
Sbjct: 1169 QCSELNQLCHPVTGVCYCAPGYYGSKCETECEAGRYGPNCEQEC-QCLNNGVC 1220
Score = 61 (26.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 16/57 (28%), Positives = 22/57 (38%)
Query: 301 CPDKCP-ENRTC--INNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHGTCD 346
C C + C + +C CP +TG C++E C C N G CD
Sbjct: 690 CTQFCDCKGAPCNSVTGKCHCPAGQTGQHCEKECEEGRWGLGCAESCPSCDNGGVCD 746
Score = 57 (25.1 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 304 KCPENRTCINNQ--CVCPPRRTGPDCQEEICP 333
+C N C ++ C CPP GP+C CP
Sbjct: 1213 QCLNNGVCKSSTGTCSCPPGFIGPNCNIT-CP 1243
Score = 57 (25.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEIC 332
+C N C I C+CP G C E++C
Sbjct: 1083 RCDHNAACHHITGTCLCPAGWRGTHC-EKVC 1112
Score = 57 (25.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPN----ECHEFL---NHGTCDLLLTGVHI 354
+C N TC + +C C TG C++E C++ N G+CD + +G H
Sbjct: 954 RCHNNGTCDPADGRCECGAGWTGSSCEQECSAGLYGVGCNQHCLCQNGGSCDRI-SG-HC 1011
Query: 355 T 355
T
Sbjct: 1012 T 1012
Score = 56 (24.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 22/73 (30%), Positives = 25/73 (34%)
Query: 287 KPS-EGFNATYQIFSCPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEI--------CP 333
KP EGF+ C KC C + C CP GP C C
Sbjct: 895 KPCPEGFHG----LECQQKCQCLNGGRCHPVTGGCQCPSGWVGPVCNATCEAGTFGPACS 950
Query: 334 NECHEFLNHGTCD 346
C N+GTCD
Sbjct: 951 QTCRCH-NNGTCD 962
Score = 55 (24.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 18/55 (32%), Positives = 22/55 (40%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVHITH 356
CP T + + C GP C+E C + CH GTC L G TH
Sbjct: 1056 CPAGWTGTHCETACTQGFYGPGCKERCRCDHNAACHHIT--GTC-LCPAGWRGTH 1107
Score = 55 (24.4 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHGTCD 346
C +C I+ C C TG C+ E C ++C E +N G CD
Sbjct: 998 CQNGGSCDRISGHCTCVSGWTGVACELECAAGHFGMDCQHKC-ECVNGGVCD 1048
Score = 54 (24.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 16/63 (25%), Positives = 24/63 (38%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHGTCDLLLTGVHI 354
C C + CVC GP+C + C N+C + G+CD ++ H
Sbjct: 782 CQNEGKCHHVTGLCVCKDGWMGPNCAKACVAGRWGPNCANQCDCRSSVGSCDPVIGLCHC 841
Query: 355 THG 357
G
Sbjct: 842 EAG 844
Score = 53 (23.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 23/71 (32%), Positives = 31/71 (43%)
Query: 312 INNQCVCPPRRTGPDCQE--------EICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQ 363
+ +CVC + G DC + E C C+ N G CD L TG H + TL +
Sbjct: 1266 LTGRCVCRAGQRGRDCGKGCAEGWFGENCDQRCN-CSNGGVCDAL-TG-HCSC--TLGWT 1320
Query: 364 VDLIRCTCRQV 374
D TC +V
Sbjct: 1321 GD----TCEEV 1327
Score = 45 (20.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 301 CPDKCP--ENRTCINN--QCVCPPRRTGPDCQEEIC 332
C KC C + +C+CP TG C E C
Sbjct: 1035 CQHKCECVNGGVCDRHSGRCLCPAGWTGTHC-ETAC 1069
Score = 43 (20.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 313 NNQCVCPPRRTGPDCQE 329
N +C C GP CQ+
Sbjct: 1482 NGRCTCLNGWIGPSCQQ 1498
Score = 43 (20.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 305 CPENRTCI--NNQCVCPPRRTGPDCQEE 330
C N C +C+CP G C+ E
Sbjct: 1386 CGANAPCDPETGRCLCPAGYQGLRCERE 1413
Score = 41 (19.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 9/23 (39%), Positives = 9/23 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDC 327
CP N CP R G DC
Sbjct: 1229 CPPGFIGPNCNITCPLGRYGQDC 1251
Score = 41 (19.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 316 CVCPPRRTGPDCQEE 330
CVC P G C E
Sbjct: 621 CVCKPGYQGKTCNRE 635
Score = 41 (19.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEF----LNHGTCDLLLTGVHITHGRTL 360
CP +T + + C R G C E CP+ C +GTC + G + +
Sbjct: 710 CPAGQTGQHCEKECEEGRWGLGCAES-CPS-CDNGGVCDRQNGTC-VCSPGFMGNLCQNV 766
Query: 361 ----HYQVD-LIRCTCR 372
H+ + L+RC+C+
Sbjct: 767 CPDGHFGLSCLLRCSCQ 783
>FB|FBgn0261800 [details] [associations]
symbol:LanB1 "LanB1" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005604
"basement membrane" evidence=ISS;NAS;IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009888 "tissue development"
evidence=NAS] [GO:0009887 "organ morphogenesis" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016477
"cell migration" evidence=IMP] [GO:0070831 "basement membrane
assembly" evidence=IMP] [GO:0048513 "organ development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
GO:GO:0016477 GO:GO:0008406 EMBL:AE014134 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 EMBL:M95811 EMBL:M19525
EMBL:BT015222 EMBL:AY095001 PIR:A28783 RefSeq:NP_476618.1
RefSeq:NP_723319.1 ProteinModelPortal:P11046 SMR:P11046
IntAct:P11046 MINT:MINT-749338 STRING:P11046 PaxDb:P11046
PRIDE:P11046 EnsemblMetazoa:FBtr0079490 EnsemblMetazoa:FBtr0079491
GeneID:34068 KEGG:dme:Dmel_CG7123 CTD:34068 FlyBase:FBgn0261800
GeneTree:ENSGT00620000087753 InParanoid:P11046 KO:K05636
OMA:DQCAENH OrthoDB:EOG4ZPC92 PhylomeDB:P11046 ChiTaRS:LanB1
GenomeRNAi:34068 NextBio:786713 Bgee:P11046 GermOnline:CG7123
GO:GO:0070831 InterPro:IPR013015 PROSITE:PS51116 Uniprot:P11046
Length = 1788
Score = 214 (80.4 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 53/142 (37%), Positives = 68/142 (47%)
Query: 35 YNKCIYGYCKGPPD-YS--C-QCELG-WTGVDCSVNCLCNNHS-TCVHGIGICDECHDWT 88
Y I G C+ P+ Y C QC+ G W +C V C CN H+ TC G C +C D T
Sbjct: 848 YCDLITGQCQCVPNTYGRECNQCQPGYWNFPECRV-CQCNGHAATCDPIQGTCIDCQDST 906
Query: 89 TGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSVLGVCDSITGE-------CICQDNT 139
TG C C G YGN ++ GCR C C S L D + + C CQ+
Sbjct: 907 TGYSCDSCLDGYYGNPLFGSEIGCRPCRCPETVASGLAHADGCSLDTRNNNMLCHCQEGY 966
Query: 140 QGKNCERCLPGYYGDPTDGGTC 161
G CE C ++G+P +GGTC
Sbjct: 967 SGSRCEICADNFFGNPDNGGTC 988
Score = 198 (74.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 38/109 (34%), Positives = 58/109 (53%)
Query: 45 GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNA 104
G PD C + +CS N + C G C +C TTGDHC+ C+ G +G+A
Sbjct: 980 GNPDNGGTC----SKCECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGDA 1035
Query: 105 TTQEGCRKCDCNSHG-NSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
Q+ C++C+C+ G N+ + CD TG+C C N QG C++C ++
Sbjct: 1036 L-QQNCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCDQCAENHW 1083
Score = 189 (71.6 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 41/113 (36%), Positives = 52/113 (46%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
C+ N + C G C +C G C C G+YG EGC+ CDCNS G+
Sbjct: 789 CNCNPTGSLSKVCESNGGYC-QCKPNVVGRQCDQCAPGTYGFGP--EGCKACDCNSIGSK 845
Query: 122 VLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGP 174
CD ITG+C C NT G+ C +C PGY+ P + C QC P
Sbjct: 846 DK-YCDLITGQCQCVPNTYGRECNQCQPGYWNFP-ECRVC--QCNGHAATCDP 894
Score = 169 (64.5 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 39/118 (33%), Positives = 58/118 (49%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHCQ 94
N+C GY D CE C+ N L N+S CV G C +C + TG C
Sbjct: 458 NQCKDGYWNLQSDNPEGCE------PCTCNPLGTLNNSGCVMRTGEC-KCKKYVTGKDCN 510
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C +YG + + EGC C+C++ G S CD I+G+C C+ + G++C + Y+
Sbjct: 511 QCMPETYGLSESPEGCSLCNCDA-GGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYF 567
Score = 152 (58.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 39/124 (31%), Positives = 54/124 (43%)
Query: 51 CQ-CELGWTGVDCSVNCLCNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATT 106
CQ C+ G S + +C++ + G G C C + TG C C+ G + +
Sbjct: 415 CQPCDCDPQG--SSDDGICDSLNELEEGAVAGAC-HCKAFVTGRRCNQCKDGYWNLQSDN 471
Query: 107 QEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGTCYYQC 165
EGC C CN G C TGEC C+ GK+C +C+P YG + G C
Sbjct: 472 PEGCEPCTCNPLGTLNNSGCVMRTGECKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNC 531
Query: 166 MARG 169
A G
Sbjct: 532 DAGG 535
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 44/136 (32%), Positives = 58/136 (42%)
Query: 41 GYCKGPPDYS---C-QC-ELGW---TGVDC-SVNC--LCNNHSTCVHGIGICDECHDWTT 89
G C P+ C QC E W +G C S NC + H C G C +C
Sbjct: 1062 GQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQC-QCKPGFG 1120
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
G C C+A +GN E C+ C+C+ G + CD TG C+C + G C C
Sbjct: 1121 GRACNQCQAHYWGNPN--EKCQPCECDQFGAADFQ-CDRETGNCVCHEGIGGYKCNECAR 1177
Query: 150 GYYGD-P--TDGGTCY 162
GY G P + G C+
Sbjct: 1178 GYIGQFPHCSPCGECF 1193
Score = 141 (54.7 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 36/128 (28%), Positives = 59/128 (46%)
Query: 36 NKCIYGYCKGPPDYS------CQC-ELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
+ C+ GY P S C+C E +G+ + C + + + +C C +
Sbjct: 912 DSCLDGYYGNPLFGSEIGCRPCRCPETVASGLAHADGCSLDTRNNNM----LC-HCQEGY 966
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV-LGVCDSITGECI-CQDNTQGKNCER 146
+G C+ C +GN C KC+C+++ + G CD TG C+ C T G +CE
Sbjct: 967 SGSRCEICADNFFGNPDNGGTCSKCECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCEL 1026
Query: 147 CLPGYYGD 154
C G++GD
Sbjct: 1027 CKDGFFGD 1034
Score = 136 (52.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 39/147 (26%), Positives = 61/147 (41%)
Query: 12 TAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNN 70
T D + + LY C C G+ +CQ CE + G + N
Sbjct: 1002 TGNCDRQTGACLKCLYQTTGDHC-ELCKDGFFGDALQQNCQQCECDFLGTN-------NT 1053
Query: 71 HSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSIT 130
+ C G C C G C C A ++ + EGC C+C+ G ++ C+S T
Sbjct: 1054 IAHCDRFTGQCP-CLPNVQGVRCDQC-AENHWKIASGEGCESCNCDPIG-ALHEQCNSYT 1110
Query: 131 GECICQDNTQGKNCERCLPGYYGDPTD 157
G+C C+ G+ C +C Y+G+P +
Sbjct: 1111 GQCQCKPGFGGRACNQCQAHYWGNPNE 1137
Score = 127 (49.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 45 GPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGN 103
G +C+ CE V C + S V G G+CD C T G HC+ C Y +
Sbjct: 346 GKKTNACKKCECNDHAVSCHFDEAVFTASGFVSG-GVCDNCLHNTRGQHCEECMPYFYRD 404
Query: 104 A----TTQEGCRKCDCNSHGNSVLGVCDSI 129
T++ C+ CDC+ G+S G+CDS+
Sbjct: 405 PEQDITSERVCQPCDCDPQGSSDDGICDSL 434
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 71/303 (23%), Positives = 109/303 (35%)
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCR--------AGSYGNATTQEGCRKCDCNSHGN 120
+N VHG C EC T G +C+ C ++G T C+KC+CN H
Sbjct: 308 DNEDGMVHGR--C-ECTHNTKGMNCEECEDFFNDLPWKPAFGKKTN--ACKKCECNDHAV 362
Query: 121 S------VLGVCDSITGE-CI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGM-L 171
S V ++G C C NT+G++CE C+P +Y DP T C
Sbjct: 363 SCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDP 422
Query: 172 TGPGPQGLGSGLAERNAWEGKDTPSREC-LWIIGQSLDSNSTAPADIILLRLQPDINVPC 230
G G+ L E EG + C ++ G+ N L P+ PC
Sbjct: 423 QGSSDDGICDSLNELE--EGAVAGACHCKAFVTGRRC--NQCKDGYWNLQSDNPEGCEPC 478
Query: 231 NENAVYIYDGLPDFVTSVGGTH-QSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPS 289
N + + V G + G C + M Y + E+ G + G
Sbjct: 479 TCNPLGTLNN-SGCVMRTGECKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDAGGSY 537
Query: 290 EGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTG----PDCQEEICPNECHEFLNHGTC 345
+ + + S +C + T C P + P+ E +EC + +G C
Sbjct: 538 DNY---CDVISGQCRCRPHMT--GRSCSQPKQNYFIPLLPEVHEAEVVDECISYGANGNC 592
Query: 346 DLL 348
L+
Sbjct: 593 SLV 595
Score = 52 (23.4 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 20/92 (21%), Positives = 33/92 (35%)
Query: 267 RGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIF--------SCPDKCPENRTCINN--QC 316
+ YE KS + ++YK + + +F +C ++ C +N C
Sbjct: 749 KDYEKYNCKSSLYDMNYKSDPKCQNLDNILSVFVHDGASMCNCNPTGSLSKVCESNGGYC 808
Query: 317 VCPPRRTGPDCQEEICPNECHEFLNHG--TCD 346
C P G C + C + F G CD
Sbjct: 809 QCKPNVVGRQCDQ--CAPGTYGFGPEGCKACD 838
Score = 51 (23.0 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 23/100 (23%), Positives = 41/100 (41%)
Query: 234 AVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSE-GF 292
+V+++DG S+ + + +L C + + GY + K V+ Q P GF
Sbjct: 779 SVFVHDG-----ASMCNCNPTGSLSKVC--ESNGGY--CQCKPNVVGRQCDQCAPGTYGF 829
Query: 293 NAT-YQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
+ C +++ C I QC C P G +C +
Sbjct: 830 GPEGCKACDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQ 869
>FB|FBgn0261563 [details] [associations]
symbol:wb "wing blister" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=ISS;NAS;IDA]
[GO:0005604 "basement membrane" evidence=ISS] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007502 "digestive tract mesoderm development" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0008406
EMBL:AE014134 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007476 Pfam:PF02210 HSSP:P00740 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GO:GO:0007502 GO:GO:0005606 FlyBase:FBgn0261563
ChiTaRS:wb RefSeq:NP_723870.1 ProteinModelPortal:Q8IP51 SMR:Q8IP51
STRING:Q8IP51 PRIDE:Q8IP51 EnsemblMetazoa:FBtr0302731 GeneID:43946
KEGG:dme:Dmel_CG42677 UCSC:CG15288-RB CTD:43946 InParanoid:Q8IP51
OMA:CNCNAYG GenomeRNAi:43946 NextBio:836431 ArrayExpress:Q8IP51
Bgee:Q8IP51 Uniprot:Q8IP51
Length = 3375
Score = 211 (79.3 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 50/134 (37%), Positives = 66/134 (49%)
Query: 59 GVDCSVNCLCNNHS-TCVHGI----GICDECHDWTTGDHCQYCRAGSYG--NATTQEGCR 111
G +C + C C H+ +C + GIC C + T G C++C G Y +A + C
Sbjct: 446 GGECEI-CQCYGHAESCTYDPFLDKGICQSCSNNTAGIECEFCEMGFYRELDAPLTDPCL 504
Query: 112 KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGML 171
C CN ++ G C S G C C + QGKNCE C PGYYGD D C +C RG L
Sbjct: 505 PCSCNPARST--GGCQSDGGSCNCLEGFQGKNCEECAPGYYGD--DCKRC--ECDERGSL 558
Query: 172 TGPGPQGLGSGLAE 185
G G SG+ +
Sbjct: 559 ---GSTGSCSGVCQ 569
Score = 208 (78.3 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 45/102 (44%), Positives = 57/102 (55%)
Query: 76 HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG--CRKCDCNSHGNSVLGVCDSITGEC 133
H IC +C + TGDHCQ C G +GN Q G C++CDC G C+ TGEC
Sbjct: 936 HAEYICTQCPEGYTGDHCQVCDDGYFGNPR-QPGSSCQRCDCAG------GPCNVTTGEC 988
Query: 134 I-CQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCMARGMLTG 173
I C+ NT+G +CERC GY+GDP G C+ C G +G
Sbjct: 989 ITCRGNTEGWHCERCKLGYWGDPAVGCDPCH--CHTEGSESG 1028
Score = 207 (77.9 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 41/113 (36%), Positives = 53/113 (46%)
Query: 66 CLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG 124
C CN S+ C G+C C T GDHC C G YG+ + GC+ C C +
Sbjct: 1670 CHCNGRSSDCDRETGVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPCPETNRNFAR 1729
Query: 125 VCDSITGE--CICQDNTQGKNCERCLPGYYGDPT--DGGTCY-YQCMARGMLT 172
C+ GE C+C+ G+ CERC GY+GDP TC C G+ T
Sbjct: 1730 GCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQT 1782
Score = 176 (67.0 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 47/149 (31%), Positives = 66/149 (44%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN 120
+C + + + S C G C C TG C CR G + N T EGCR C C+ HG+
Sbjct: 1149 ECHCSSVGSLSSDCDKRTGQC-ACLANVTGRRCDKCRPGHW-NLTAGEGCRDCRCDPHGS 1206
Query: 121 SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGP--G--- 175
C+ TG+C C+ G++C C G++G T+G C + G + P G
Sbjct: 1207 RG-HECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCI 1265
Query: 176 -PQ---GLGSGLAERNAWEGKDTPS-REC 199
P+ GLG G W + REC
Sbjct: 1266 CPKFTRGLGCGQCVPGTWGWQARLGCREC 1294
Score = 167 (63.8 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 41/126 (32%), Positives = 60/126 (47%)
Query: 37 KCIYGYCKGPPD-YSCQ-CELGWTGVDCSVNC-LCNNHSTCVHGIGICDE------CHDW 87
+CI C+G + + C+ C+LG+ G D +V C C+ H+ G+CD C
Sbjct: 987 ECIT--CRGNTEGWHCERCKLGYWG-DPAVGCDPCHCHTEGSES-GLCDSTDGQCLCKPR 1042
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
G C C G Y N + C C+C+ G+ V CD TG+C C++ G C C
Sbjct: 1043 YAGQKCDECDVG-YANVELR--CPSCNCDPLGSLVQDRCDPHTGQCHCKEGVMGAKCHEC 1099
Query: 148 LPGYYG 153
GY+G
Sbjct: 1100 QDGYFG 1105
Score = 166 (63.5 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 42/125 (33%), Positives = 59/125 (47%)
Query: 33 LCYNKCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHG-----IGICDECHD 86
+C +C GY G D+ CQ C+ G+ G C C G G C C
Sbjct: 940 IC-TQCPEGYT-G--DH-CQVCDDGYFGNPRQPGSSCQR-CDCAGGPCNVTTGECITCRG 993
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
T G HC+ C+ G +G+ GC C C++ G S G+CDS G+C+C+ G+ C+
Sbjct: 994 NTEGWHCERCKLGYWGDPAV--GCDPCHCHTEG-SESGLCDSTDGQCLCKPRYAGQKCDE 1050
Query: 147 CLPGY 151
C GY
Sbjct: 1051 CDVGY 1055
Score = 157 (60.3 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 39/130 (30%), Positives = 60/130 (46%)
Query: 51 CQ-CELG-WTGVDCSVN-----CLCNN-HST--CVHGIGICDECHDWTTGDHCQYCRAGS 100
C+ CE+G + +D + C CN ST C G C+ C + G +C+ C G
Sbjct: 484 CEFCEMGFYRELDAPLTDPCLPCSCNPARSTGGCQSDGGSCN-CLEGFQGKNCEECAPGY 542
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGT 160
YG + C++C+C+ G+ LG S +G C C+ N +G C C PGY+ +
Sbjct: 543 YG-----DDCKRCECDERGS--LGSTGSCSGVCQCKLNVEGSTCSECAPGYFDLSAENAE 595
Query: 161 CYYQCMARGM 170
C G+
Sbjct: 596 GCTSCWCSGV 605
Score = 151 (58.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 41/138 (29%), Positives = 61/138 (44%)
Query: 51 CQCELGWTGVDCSVNCL----------CNNHSTCVHGIGICDE------CHDWTTGDHCQ 94
C C++G G C+ C C S C +CD C +T G C
Sbjct: 1218 CDCKIGVGGQHCN-ECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCICPKFTRGLGCG 1276
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
C G++G + GCR+C+C+ H S+ C + G+C C++ G+ C+ C GY+G
Sbjct: 1277 QCVPGTWG-WQARLGCRECECD-HIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYFGY 1334
Query: 155 PTDGGTCYYQCMARGMLT 172
P + C C A G T
Sbjct: 1335 P-ECRRC--GCDAEGSFT 1349
Score = 138 (53.6 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 33/82 (40%), Positives = 38/82 (46%)
Query: 84 CHDWTTGDHCQYCRAGS---YGNATTQE---GCRKCDCNSHGNSVLGVCDSITGEC-ICQ 136
C TG C+ C G Y N + + C C CN H NS CD +G C C
Sbjct: 817 CPAGYTGLSCEGCAFGFKRIYENTSDHQILSKCIPCPCNGHSNS----CDLQSGNCGDCM 872
Query: 137 DNTQGKNCERCLPGYYGDPTDG 158
NT G CERC GYYG+P G
Sbjct: 873 HNTFGDRCERCQLGYYGNPLQG 894
Score = 126 (49.4 bits), Expect = 0.00065, P = 0.00065
Identities = 34/119 (28%), Positives = 51/119 (42%)
Query: 43 CKGPP--DYSCQCELGWTGVDCSVN----CLC-NNHSTCVHGIGICDE-----CHDWTTG 90
C+G D+ QC G+ G S + C C + G + D C TG
Sbjct: 1689 CRGNTGGDHCHQCAEGFYGDPNSPHGCQACPCPETNRNFARGCNVWDGEVSCVCKPGYTG 1748
Query: 91 DHCQYCRAGSYGNATTQEG--CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
C+ C+AG +G+ C+ C+C+ G G CD TG C C++ G C++C
Sbjct: 1749 RLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEG-CDVETGRCYCREGVTGLKCDKC 1806
Score = 56 (24.8 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 286 GKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
G P+ G + + C + E+ C + QC+C PR G C E
Sbjct: 1009 GDPAVGCDPCH----CHTEGSESGLCDSTDGQCLCKPRYAGQKCDE 1050
Score = 48 (22.0 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 289 SEGF----NATYQIFSCPDKCPE-NRTCINN--------QCVCPPRRTGPDCQ 328
+EGF N+ + +CP CPE NR CVC P TG C+
Sbjct: 1702 AEGFYGDPNSPHGCQACP--CPETNRNFARGCNVWDGEVSCVCKPGYTGRLCE 1752
Score = 48 (22.0 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 26/92 (28%), Positives = 36/92 (39%)
Query: 252 HQSTTLGVFCTE---DMH--RGYEV------LEAKSGVMTIHYKQGKPSEGFNATYQIFS 300
H + T G C + D H RG+E + K GV H + +EGF +
Sbjct: 1187 HWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCNEC--TEGFFG-FSTEG 1243
Query: 301 CP--DKC-PENRTCI--NNQCVCPPRRTGPDC 327
C C E + C N +C+CP G C
Sbjct: 1244 CQRCSACRSEGQVCDPHNGRCICPKFTRGLGC 1275
Score = 45 (20.9 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 315 QCVCPPRRTGPDCQ 328
QC+CP TG C+
Sbjct: 814 QCLCPAGYTGLSCE 827
Score = 43 (20.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 315 QCVCPPRRTGPDCQE 329
+C CP R G CQ+
Sbjct: 1627 RCKCPKRFDGLSCQD 1641
Score = 43 (20.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 301 CPD-KCPENRTCINNQCVCPPRRTGPDCQEEICPNECHE 338
CP C + + ++C P C+E + +CHE
Sbjct: 1062 CPSCNCDPLGSLVQDRC--DPHTGQCHCKEGVMGAKCHE 1098
>UNIPROTKB|F1M2P5 [details] [associations]
symbol:Atrnl1 "Protein Atrnl1" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 RGD:1563485 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 IPI:IPI00949489
Ensembl:ENSRNOT00000067127 ArrayExpress:F1M2P5 Uniprot:F1M2P5
Length = 1076
Score = 192 (72.6 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 35/91 (38%), Positives = 48/91 (52%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HSTC++ +C++C + TTG CQ C G YG+ T C C C
Sbjct: 987 WSFIQCPA-CQCNGHSTCINN-NVCEQCKNLTTGRQCQDCMPGYYGDPTNGGQCTACTCG 1044
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCERC 147
H N VC TG+C C T+G ++C
Sbjct: 1045 GHAN----VCHLHTGKCFC--TTKGIKGDQC 1069
Score = 136 (52.9 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 110 CRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
C C CN H + VC+ C++ T G+ C+ C+PGYYGDPT+GG C
Sbjct: 992 CPACQCNGHSTCINNNVCEQ------CKNLTTGRQCQDCMPGYYGDPTNGGQC 1038
Score = 87 (35.7 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 25/86 (29%), Positives = 36/86 (41%)
Query: 68 CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSY--GNATTQEGCRKCDCNSHGNSVLGV 125
C+ H C + + + YC Y G A C K +C S + G
Sbjct: 197 CSGHGKCTTSVSVASQV----------YCECDKYWKGEACDIPYC-KANCGSPDH---GY 242
Query: 126 CDSITGE--CICQDNTQGKNCERCLP 149
CD +TGE C+C D+ QG +C +P
Sbjct: 243 CD-LTGEKLCVCNDSWQGPDCSLNVP 267
Score = 78 (32.5 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 27/91 (29%), Positives = 34/91 (37%)
Query: 288 PSEGFNATYQIFSCPD-KCPENRTCINNQ-CV-CPPRRTGPDCQEEIC-PNECHEFLNHG 343
P E N + CP +C + TCINN C C TG CQ+ C P + N G
Sbjct: 980 PKEK-NYEWSFIQCPACQCNGHSTCINNNVCEQCKNLTTGRQCQD--CMPGYYGDPTNGG 1036
Query: 344 TCDLLLTGVHITHGRTLHYQVDLIRCTCRQV 374
C G H H CT + +
Sbjct: 1037 QCTACTCG---GHANVCHLHTGKCFCTTKGI 1064
Score = 69 (29.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 22/80 (27%), Positives = 33/80 (41%)
Query: 25 LLYIFNASLCYNKCI-YGYCKGPPDYS----CQCELGWTGVDCSV-----NCLCNNHSTC 74
+ Y N+ C N C +G C + C+C+ W G C + NC +H C
Sbjct: 186 IFYSINS--CPNNCSGHGKCTTSVSVASQVYCECDKYWKGEACDIPYCKANCGSPDHGYC 243
Query: 75 -VHGIGICDECHDWTTGDHC 93
+ G +C C+D G C
Sbjct: 244 DLTGEKLC-VCNDSWQGPDC 262
Score = 66 (28.3 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCSVN 65
+GYC + C C W G DCS+N
Sbjct: 240 HGYCDLTGEKLCVCNDSWQGPDCSLN 265
Score = 54 (24.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 74 CVHGIGICDECHDWTTGDHCQYCR 97
CV+ +CD W GD CQ+C+
Sbjct: 56 CVNSTCLCDP--GWV-GDQCQHCQ 76
Score = 50 (22.7 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
C G C +C C+ GW G C +C
Sbjct: 51 CFSGRCVNS---TCLCDPGWVGDQCQ-HC 75
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 153 GDPTDGGTCYYQCMARGMLTG 173
G+P D G C Y + R + G
Sbjct: 820 GEPNDSGFCAY--LERAAVAG 838
>UNIPROTKB|Q16363 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0001568
"blood vessel development" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0031012 "extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0030155
GO:GO:0070062 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pathway_Interaction_DB:amb2_neutrophils_pathway
Pathway_Interaction_DB:foxm1pathway Pfam:PF02210 GO:GO:0045995
GO:GO:0005201 eggNOG:NOG247347 GO:GO:0005606 EMBL:S78569
EMBL:X91171 EMBL:X70904 EMBL:AB210027 EMBL:BT006690 EMBL:Z99289
EMBL:AL590106 EMBL:BC004241 EMBL:Y14240 EMBL:X76939 IPI:IPI00024406
IPI:IPI00329482 IPI:IPI00735310 PIR:S68960 RefSeq:NP_001098676.2
RefSeq:NP_001098677.2 RefSeq:NP_001098678.1 RefSeq:NP_001098679.1
RefSeq:NP_002281.3 UniGene:Hs.654572 ProteinModelPortal:Q16363
SMR:Q16363 IntAct:Q16363 MINT:MINT-1200879 STRING:Q16363
PhosphoSite:Q16363 DMDM:292495093 PaxDb:Q16363 PRIDE:Q16363
DNASU:3910 Ensembl:ENST00000230538 Ensembl:ENST00000368638
Ensembl:ENST00000389463 Ensembl:ENST00000424408
Ensembl:ENST00000453937 Ensembl:ENST00000455073
Ensembl:ENST00000522006 Ensembl:ENST00000578470
Ensembl:ENST00000584877 Ensembl:ENST00000584945 GeneID:3910
KEGG:hsa:3910 UCSC:uc003pvt.2 UCSC:uc003pvu.2 UCSC:uc010kdz.1
CTD:3910 GeneCards:GC06M112475 HGNC:HGNC:6484 HPA:HPA015693
MIM:600133 neXtProt:NX_Q16363 PharmGKB:PA30273 HOVERGEN:HBG052299
InParanoid:Q16363 KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB
PhylomeDB:Q16363 ChiTaRS:LAMA4 GenomeRNAi:3910 NextBio:15351
ArrayExpress:Q16363 Bgee:Q16363 CleanEx:HS_LAMA4
Genevestigator:Q16363 GermOnline:ENSG00000112769 Uniprot:Q16363
Length = 1823
Score = 213 (80.0 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 64/186 (34%), Positives = 82/186 (44%)
Query: 37 KCIYGYC----KGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGI--CDECHDWTT 89
KC+ GY +G P + CQ C C + L N +C G C C++
Sbjct: 112 KCLDGYIGDSIRGAPQF-CQPCP-------CPLPHLANFAESCYRKNGAVRCI-CNENYA 162
Query: 90 GDHCQYCRAGSYGNATT-QEGCRKCDC--NSHGNSVLGVCDSITGECI-CQDNTQGKNCE 145
G +C+ C G YGN C+KCDC NS N + CD +TG+C C NT G CE
Sbjct: 163 GPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCE 222
Query: 146 RCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAER-NAWEGKDTPS---RECLW 201
RC PGYYGD C C G GP G L E G D P+ +C+W
Sbjct: 223 RCAPGYYGDARIAKNCAV-CNCGG---GPCDSVTGECLEEGFEPPTGMDCPTISCDKCVW 278
Query: 202 IIGQSL 207
+ +L
Sbjct: 279 DLTDAL 284
Score = 206 (77.6 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 46/116 (39%), Positives = 59/116 (50%)
Query: 61 DCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCN- 116
+C V C CN +S C+ G G C C TTG+HC+ C G G++ + C+ C C
Sbjct: 78 EC-VPCDCNGNSNECLDGSGYCVHCQRNTTGEHCEKCLDGYIGDSIRGAPQFCQPCPCPL 136
Query: 117 SHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT-DGGTCYYQCMARG 169
H + C G CIC +N G NCERC PGYYG+P G TC +C G
Sbjct: 137 PHLANFAESCYRKNGAVRCICNENYAGPNCERCAPGYYGNPLLIGSTCK-KCDCSG 191
>ZFIN|ZDB-GENE-980526-104 [details] [associations]
symbol:tnc "tenascin C" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0007498 "mesoderm
development" evidence=IEP] [GO:0001755 "neural crest cell
migration" evidence=IEP] [GO:0030517 "negative regulation of axon
extension" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP] [GO:0021554
"optic nerve development" evidence=IMP] [GO:0014814 "axon
regeneration at neuromuscular junction" evidence=IMP] [GO:0048680
"positive regulation of axon regeneration" evidence=IMP]
[GO:0045887 "positive regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR000742
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
ZFIN:ZDB-GENE-980526-104 GO:GO:0007411 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007498 GO:GO:0001755
GO:GO:0045887 SUPFAM:SSF49265 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0048680 GO:GO:0007413 Gene3D:3.90.215.10
Gene3D:4.10.530.10 InterPro:IPR014716 InterPro:IPR014715
Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS51406
InterPro:IPR013111 Pfam:PF07974 GO:GO:0030517 Pfam:PF12661
GO:GO:0021554 GeneTree:ENSGT00690000102056 EMBL:FP015972
IPI:IPI00899922 Ensembl:ENSDART00000026107
Ensembl:ENSDART00000131729 GO:GO:0014814 Uniprot:F1QYE2
Length = 1811
Score = 140 (54.3 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 48/153 (31%), Positives = 65/153 (42%)
Query: 33 LCYNKCI-YGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWT 88
+C N C G C+ +C C+ G+TG DC + C CN+H CV+G +C
Sbjct: 286 ICPNDCFDRGRCENG---TCYCDEGFTGEDCGELTCPQNCNHHGRCVNG-----QC---- 333
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG--VCD-SITGE-CI---CQDNTQG 141
C G G ++ C DC+ G+ G +CD GE C C DN G
Sbjct: 334 ------ICNIGYSGEDCSKLTCLN-DCSERGHCFNGKCICDPGFEGEDCSLLSCPDNCNG 386
Query: 142 K-NCER----CLPGYYGDPTDGGTCYYQCMARG 169
+ +C C PGY GD +C C RG
Sbjct: 387 RGHCVNGECICGPGYEGDDCSELSCLNNCHDRG 419
Score = 136 (52.9 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 39/126 (30%), Positives = 53/126 (42%)
Query: 34 CYNKCI-YGYCKGPPDYSCQCELGWTGVDCSVN-CL--CNNHSTCVHGIGICDECHDWTT 89
C N C G C C C+ G+ G DCS+ C C+ CV G +C HD
Sbjct: 411 CLNNCHDRGRCVNG---KCICKAGFAGEDCSIKTCPHDCHGRGECVDGKCVC---HDGFA 464
Query: 90 GDHC--QYCRAGSYGNATTQEG---CRK------CDCNSHGNSVLGVCDSITGECICQDN 138
G+HC + C +G+ +G C K C + N G I G+CIC D
Sbjct: 465 GEHCGIKTCPHHCHGHGQCVDGKCICHKGFAGEDCSIKTCPNHCHGQGQCIDGKCICHDG 524
Query: 139 TQGKNC 144
G++C
Sbjct: 525 FAGEDC 530
Score = 129 (50.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 44/144 (30%), Positives = 58/144 (40%)
Query: 34 CYNKCI-YGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDE----CHDWT 88
C N C G C D C C G+ G DCS+ C NH C HG G C + CHD
Sbjct: 504 CPNHCHGQGQCI---DGKCICHDGFAGEDCSIKT-CPNH--C-HGRGRCVDGKCICHDGF 556
Query: 89 TGDHCQY--CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
G+ C C + + +G KC C H C +T C + + N +
Sbjct: 557 AGEDCNIKTCPNDCHDHGECVDG--KCIC--HAGFTGHDCSELTCPNDCHNRGRCVNGQC 612
Query: 147 -CLPGYYGDPTDGGTCYYQCMARG 169
C G+ G+ TC C+ RG
Sbjct: 613 VCNIGFTGEDCGTKTCPNNCLDRG 636
Score = 127 (49.8 bits), Expect = 0.00026, P = 0.00026
Identities = 41/135 (30%), Positives = 55/135 (40%)
Query: 30 NASLCYNKCI-YGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGIC---- 81
N C N C +G C D C C G+TG DCS + C C+N CV+G +C
Sbjct: 562 NIKTCPNDCHDHGECV---DGKCICHAGFTGHDCSELTCPNDCHNRGRCVNGQCVCNIGF 618
Query: 82 --DECHDWTTGDHCQ---YCRAGSYG--NATTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
++C T ++C +C G T E C C + N G C + G CI
Sbjct: 619 TGEDCGTKTCPNNCLDRGFCEDGKCVCFEGYTGEDCSVLTCPADCNDQ-GQC--LNGMCI 675
Query: 135 CQDNTQGKNCERCLP 149
C G +C P
Sbjct: 676 CDLGFTGDDCSEISP 690
Score = 126 (49.4 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 290 EGF-NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+GF I +CP+ C ++ C++ +C+C TG DC E CPN+CH N G C
Sbjct: 554 DGFAGEDCNIKTCPNDCHDHGECVDGKCICHAGFTGHDCSELTCPNDCH---NRGRC 607
Score = 122 (48.0 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 29/84 (34%), Positives = 40/84 (47%)
Query: 290 EGF-NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLL 348
+GF I +CP+ C C++ +C+C G DC + CPN+CH+ HG C
Sbjct: 523 DGFAGEDCSIKTCPNHCHGRGRCVDGKCICHDGFAGEDCNIKTCPNDCHD---HGEC--- 576
Query: 349 LTGVHITH-GRTLHYQVDLIRCTC 371
+ G I H G T H D TC
Sbjct: 577 VDGKCICHAGFTGH---DCSELTC 597
Score = 122 (48.0 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 298 IFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+ SCPD C C+N +C+C P G DC E C N CH+ G C
Sbjct: 377 LLSCPDNCNGRGHCVNGECICGPGYEGDDCSELSCLNNCHD---RGRC 421
Score = 122 (48.0 bits), Expect = 0.00091, P = 0.00091
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 289 SEGF-NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEF--LNHGTC 345
+EGF + +CP C C++++CVC TG DC E ICPN+C + +GTC
Sbjct: 243 AEGFIGEDCSLSNCPSNCLGRGRCVDDECVCDEPWTGFDCSELICPNDCFDRGRCENGTC 302
Score = 121 (47.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 42/144 (29%), Positives = 58/144 (40%)
Query: 48 DYSCQCELGWTGVDCSVN-CL--CNNHSTCVHGIGIC------DECHDWTTGDHCQ---Y 95
D C C G+ G C + C C+ H CV G IC ++C T +HC
Sbjct: 454 DGKCVCHDGFAGEHCGIKTCPHHCHGHGQCVDGKCICHKGFAGEDCSIKTCPNHCHGQGQ 513
Query: 96 CRAGSY--GNATTQEGC--RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPG 150
C G + E C + C + HG G C + G+CIC D G++C + P
Sbjct: 514 CIDGKCICHDGFAGEDCSIKTCPNHCHGR---GRC--VDGKCICHDGFAGEDCNIKTCPN 568
Query: 151 YYGDPTDGGTCYY-QCMARGMLTG 173
D D G C +C+ TG
Sbjct: 569 ---DCHDHGECVDGKCICHAGFTG 589
Score = 118 (46.6 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 41/143 (28%), Positives = 57/143 (39%)
Query: 42 YCKGPPDYS-----CQCELGWTGVDCSV-NC--LCNNHSTCVHGIGICDECHDWTTGDHC 93
YC G +YS C CE GW GV+CS C C + C G +C E G+ C
Sbjct: 164 YCSGRGNYSTDTCSCVCEPGWKGVNCSEPECPNYCQDQGRCEDGKCVCFEGFG---GEDC 220
Query: 94 --QYCRAGSYGNATTQEGCRKC-------DCNSHG--NSVLGVCDSITGECICQDNTQGK 142
+ C N +G C DC+ ++ LG + EC+C + G
Sbjct: 221 GIELCPVDCGENGECIDGACICAEGFIGEDCSLSNCPSNCLGRGRCVDDECVCDEPWTGF 280
Query: 143 NCERCL-PGYYGDP--TDGGTCY 162
+C + P D + GTCY
Sbjct: 281 DCSELICPNDCFDRGRCENGTCY 303
Score = 116 (45.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+CP+ C C+N QCVC TG DC + CPN C L+ G C+
Sbjct: 596 TCPNDCHNRGRCVNGQCVCNIGFTGEDCGTKTCPNNC---LDRGFCE 639
Score = 116 (45.9 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 34 CYNKCIY-GYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICD------E 83
C C + G C C C +G++G DCS + CL C+ C +G ICD +
Sbjct: 318 CPQNCNHHGRCVNG---QCICNIGYSGEDCSKLTCLNDCSERGHCFNGKCICDPGFEGED 374
Query: 84 CHDWTTGDHCQ---YCRAGSYGNATTQEG--CRKCDC--NSHGNSVLGVCDSITGECICQ 136
C + D+C +C G EG C + C N H G C + G+CIC+
Sbjct: 375 CSLLSCPDNCNGRGHCVNGECICGPGYEGDDCSELSCLNNCHDR---GRC--VNGKCICK 429
Query: 137 DNTQGKNC 144
G++C
Sbjct: 430 AGFAGEDC 437
Score = 105 (42.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 298 IFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
I +CP+ C CI+ +C+C G DC + CPN CH G C
Sbjct: 501 IKTCPNHCHGQGQCIDGKCICHDGFAGEDCSIKTCPNHCH---GRGRC 545
Score = 105 (42.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 290 EGFNATY-QIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+GF + I +CP C + C++ +C+C G DC + CPN CH G C
Sbjct: 461 DGFAGEHCGIKTCPHHCHGHGQCVDGKCICHKGFAGEDCSIKTCPNHCH---GQGQC 514
Score = 104 (41.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SC + C + C+N +C+C G DC + CP++CH G C
Sbjct: 410 SCLNNCHDRGRCVNGKCICKAGFAGEDCSIKTCPHDCH---GRGEC 452
Score = 102 (41.0 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHE 338
+CP C + C+N QC+C +G DC + C N+C E
Sbjct: 317 TCPQNCNHHGRCVNGQCICNIGYSGEDCSKLTCLNDCSE 355
Score = 97 (39.2 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 298 IFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
I +CP C C++ +CVC G C + CP+ CH HG C
Sbjct: 439 IKTCPHDCHGRGECVDGKCVCHDGFAGEHCGIKTCPHHCH---GHGQC 483
Score = 96 (38.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHE---FLNHGT-CDLLLTG 351
+CP+ C + C + +CVC TG DC CP +C++ LN CDL TG
Sbjct: 627 TCPNNCLDRGFCEDGKCVCFEGYTGEDCSVLTCPADCNDQGQCLNGMCICDLGFTG 682
Score = 92 (37.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECH 337
+C + C E C N +C+C P G DC CP+ C+
Sbjct: 348 TCLNDCSERGHCFNGKCICDPGFEGEDCSLLSCPDNCN 385
Score = 85 (35.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 290 EGFNAT-YQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICP 333
EG+ + +CP C + C+N C+C TG DC E I P
Sbjct: 647 EGYTGEDCSVLTCPADCNDQGQCLNGMCICDLGFTGDDCSE-ISP 690
>UNIPROTKB|F1NQ51 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:AADN02021360
EMBL:AADN02021358 EMBL:AADN02021359 IPI:IPI00597868
Ensembl:ENSGALT00000024287 Uniprot:F1NQ51
Length = 3356
Score = 226 (84.6 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 59/157 (37%), Positives = 76/157 (48%)
Query: 30 NASLCYNKCIYGYCKGPPDY---SCQ-CELGW----TGVDCS--VNCLCNNHST-CVHGI 78
+ S+ YN C PP+Y SCQ C LG+ G+ V C CN +S C G
Sbjct: 1657 SGSIAYN---VETCSCPPEYAGDSCQDCGLGFYRESKGLFSGRCVPCNCNGNSNRCHDGT 1713
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQ 136
G C C T G+ C+ C+ G +G+AT Q CR C C G C + GE C+C+
Sbjct: 1714 GKCINCQYNTAGEKCELCKDGYFGDAT-QGSCRICPCPYTNRFATG-CVANGGEIQCLCK 1771
Query: 137 DNTQGKNCERCLPGYYGDPTD-GGTCYY-QCMARGML 171
+ G CERC PGY+G+P GG C C G L
Sbjct: 1772 EGYTGVRCERCAPGYFGNPQKYGGYCQKCNCNNNGQL 1808
Score = 149 (57.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 37/117 (31%), Positives = 50/117 (42%)
Query: 56 GWTGVDCSVNCLCNN-HSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCD 114
G +CS + N C G C +C G C C G+Y C C
Sbjct: 1363 GCESCNCSERGVVNAARPECEKNNGQC-KCKPGIRGRQCDRCAPGTYDFPN----CIPCK 1417
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG-YYGDPTDGGTCYYQCMARGM 170
CN G VCD TG C+C++N +G C+ C PG +Y DP++ C C G+
Sbjct: 1418 CNRDGTEP-DVCDPQTGICLCKENVEGAECDICRPGSFYLDPSNPKGCT-TCFCFGV 1472
Score = 146 (56.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 31/83 (37%), Positives = 41/83 (49%)
Query: 77 GIGICDECHDWTTGDHCQYCRAG---SYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
G G+C C T G +C+ C G YG A +GC C C+ G C+ +G
Sbjct: 385 GGGVCINCQHNTAGVNCEKCAKGYYRPYGVPARAPDGCISCPCDLERAE--G-CEEGSGR 441
Query: 133 CICQDNTQGKNCERCLPGYYGDP 155
C C+ N QG+NCE C G+Y P
Sbjct: 442 CFCKWNFQGENCEHCADGFYSFP 464
Score = 142 (55.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 38/130 (29%), Positives = 50/130 (38%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCS--------------VNCLCNNHSTCVHGIGICDECH 85
+ C+ P C+C+ TG C +N CN + G C +C
Sbjct: 546 HSICE-PTTGQCECQTNVTGRQCDRCISAAPNFPYCEGINSECNPSGSVDSHSGYC-QCL 603
Query: 86 DWTTGDHCQYCRAGSYGNATTQ--EGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQGK 142
G C C+ Y N + EGC C C+ G S +G C TG C C+ N G
Sbjct: 604 QHVEGPTCSKCKP-LYWNLAEENPEGCTACQCDVSGTLSGVGECQQETGRCYCKSNVCGD 662
Query: 143 NCERCLPGYY 152
C C GYY
Sbjct: 663 FCNTCEAGYY 672
Score = 141 (54.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 43/135 (31%), Positives = 67/135 (49%)
Query: 30 NASLCYN---KCIYGYCK-GPPDYSCQ-CELGWTGVDCSVNC-LC-----NNHST-CV-H 76
N++ C++ KCI C+ C+ C+ G+ G +C +C N +T CV +
Sbjct: 1705 NSNRCHDGTGKCIN--CQYNTAGEKCELCKDGYFGDATQGSCRICPCPYTNRFATGCVAN 1762
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECIC 135
G I C + TG C+ C G +GN G C+KC+CN++G L CD +TGEC
Sbjct: 1763 GGEIQCLCKEGYTGVRCERCAPGYFGNPQKYGGYCQKCNCNNNGQ--LASCDRLTGECFN 1820
Query: 136 ---QDNTQGKNCERC 147
+D ++C+ C
Sbjct: 1821 NEPKDVDPNEDCDSC 1835
Score = 65 (27.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 296 YQIFSCP-DKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNH 342
Y SC C + R C + +C+CPPR P C E+C E + F H
Sbjct: 1315 YGFPSCKLCNCGQ-RLCDDLTGKCICPPRTVKPKC--EVC--ERYYFSYH 1359
Score = 49 (22.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 316 CVCPPRRTGPDCQE 329
C CPP G CQ+
Sbjct: 1667 CSCPPEYAGDSCQD 1680
Score = 48 (22.0 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 12/49 (24%), Positives = 20/49 (40%)
Query: 300 SCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+C + + TC + QC+C P G C C + F + C+
Sbjct: 1278 NCHSEGSMSPTCSPLGGQCICRPNVIGRQCSR--CQTGYYGFPSCKLCN 1324
Score = 47 (21.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+C +N N QC C P G C C ++F N C
Sbjct: 1381 ECEKN----NGQCKCKPGIRGRQCDR--CAPGTYDFPNCIPC 1416
Score = 44 (20.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 301 CPDKCP-ENRT---CINN----QCVCPPRRTGPDCQ 328
CP CP NR C+ N QC+C TG C+
Sbjct: 1747 CP--CPYTNRFATGCVANGGEIQCLCKEGYTGVRCE 1780
Score = 41 (19.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 15/64 (23%), Positives = 21/64 (32%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEI- 331
+SGV+ + +P + C + C QC C TG C I
Sbjct: 513 RSGVVGLQCDSCQPGHHSFPVCEACQCSPLGSRHSICEPTTGQCECQTNVTGRQCDRCIS 572
Query: 332 -CPN 334
PN
Sbjct: 573 AAPN 576
Score = 37 (18.1 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 263 EDMHRGYEVLEAKSGVMTIHYKQG 286
+D +GY + K G +T Y G
Sbjct: 2458 KDASKGYIGMAVKDGHLTCVYNLG 2481
>UNIPROTKB|F1MRZ6 [details] [associations]
symbol:TNC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060739 "mesenchymal-epithelial cell signaling
involved in prostate gland development" evidence=IEA] [GO:0045545
"syndecan binding" evidence=IEA] [GO:0014012 "peripheral nervous
system axon regeneration" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005614 "interstitial
matrix" evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0008284 GO:GO:0007528 SUPFAM:SSF49265 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0010628 GO:GO:0005604
GO:GO:0060740 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS51406 GO:GO:0014012 GO:GO:0005614
InterPro:IPR013111 Pfam:PF07974 Pfam:PF12661 OMA:GQRSCPN
GO:GO:0060739 GeneTree:ENSGT00690000102056 EMBL:DAAA02024590
EMBL:DAAA02024591 EMBL:DAAA02024592 EMBL:DAAA02024593
IPI:IPI00694504 Ensembl:ENSBTAT00000000752 ArrayExpress:F1MRZ6
Uniprot:F1MRZ6
Length = 2231
Score = 150 (57.9 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 45/146 (30%), Positives = 65/146 (44%)
Query: 48 DYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTTGDHC--QYCRAGSYG 102
D C+C G+TG DC + C C+ H CV+G +CDE + TG+ C + C + +G
Sbjct: 419 DGRCECNDGFTGADCGELQCPRDCSGHGRCVNGQCVCDEGY---TGEDCGQRRCPSDCHG 475
Query: 103 NATTQEGCRKC-------DCNS----HGNSVLGVCDSITGECICQDNTQGKNCE--RCLP 149
+G +C DC H G C + G C+C D G++C RC P
Sbjct: 476 RGRCVDGRCECQPGFQGDDCGEMSCPHDCHQHGRC--VNGMCVCDDAYTGEDCRELRC-P 532
Query: 150 GYYGDPTDGGTCYY-QCMARGMLTGP 174
G D + G C +C+ GP
Sbjct: 533 G---DCSQRGRCVDGRCVCEDGFAGP 555
Score = 145 (56.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 45/148 (30%), Positives = 67/148 (45%)
Query: 48 DYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTTGDHCQYCRA-GSY-- 101
D C+C+ G+ G DC ++C C+ H CV+G+ +CD+ + TG+ C+ R G
Sbjct: 481 DGRCECQPGFQGDDCGEMSCPHDCHQHGRCVNGMCVCDDAY---TGEDCRELRCPGDCSQ 537
Query: 102 ------GNATTQEGCRKCDC-------NSHGNSVLGVCDSITGECICQDNTQGKNC-ERC 147
G ++G DC N HG G C + G+C+C + G +C +R
Sbjct: 538 RGRCVDGRCVCEDGFAGPDCADLACPGNCHGR---GRC--VDGQCVCLEGFTGPDCAQRR 592
Query: 148 LPGYYGDPTDGGTCYY-QCMARGMLTGP 174
PG D G C QC+ TGP
Sbjct: 593 CPG---DCHGQGRCVDGQCVCHEGFTGP 617
Score = 118 (46.6 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 37/137 (27%), Positives = 53/137 (38%)
Query: 33 LCYNKCI-YGYCKGPPDYSCQCELGWTGVDCS-VNC--LCNNHSTCVHGIGICDE----- 83
+C N C G C +C C+ G+TG DC + C C+ H C G +CDE
Sbjct: 344 VCPNDCFDRGRCLNG---TCSCDEGFTGEDCGQLACPHACHGHGRCDEGQCVCDEGFAGP 400
Query: 84 -CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNS----HGNSVLGVCDSITGECICQDN 138
C + C G +G DC S G C + G+C+C +
Sbjct: 401 DCSERRCPSDCHERGRCVDGRCECNDGFTGADCGELQCPRDCSGHGRC--VNGQCVCDEG 458
Query: 139 TQGKNC--ERCLPGYYG 153
G++C RC +G
Sbjct: 459 YTGEDCGQRRCPSDCHG 475
Score = 118 (46.6 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 43/157 (27%), Positives = 63/157 (40%)
Query: 42 YCKGPPDYS-----CQCELGWTGVDCSV-NCL--CNNHSTCVHGIGICDECHDWTTGDHC 93
+C G ++S C CE GW G +CS C C+ H C+ G +C H+ TG+ C
Sbjct: 190 FCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLHGQCLDGQCVC---HEGFTGEDC 246
Query: 94 QY--CRAGSYGNATTQEGCRKC-------DCNSHGNSVL-----GVCDSITGECICQDNT 139
C + +G C DC+ V G C + G C+CQ+
Sbjct: 247 GQLACPSDCNDQGKCVDGACVCFEGYSGLDCSQETCPVPCSEEHGRC--VDGRCVCQEGF 304
Query: 140 QGKNCER--CLPGYYGDPTDGGTCYY-QCMARGMLTG 173
G++C CL +G G C +C+ TG
Sbjct: 305 AGEDCREPLCLHNCHGR----GRCVENECVCDEGFTG 337
Score = 117 (46.2 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C C++ QCVC TGPDC + CPN+C N G C
Sbjct: 593 CPGDCHGQGRCVDGQCVCHEGFTGPDCAQRSCPNDCS---NWGQC 634
Score = 117 (46.2 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 289 SEGFN-ATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
++GF A CP C + C+N QCVC TG DC + CP++CH G C
Sbjct: 425 NDGFTGADCGELQCPRDCSGHGRCVNGQCVCDEGYTGEDCGQRRCPSDCH---GRGRC 479
Score = 116 (45.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+CP C C++ QCVC TGPDC + CP +CH G C
Sbjct: 561 ACPGNCHGRGRCVDGQCVCLEGFTGPDCAQRRCPGDCH---GQGRC 603
Score = 116 (45.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+CP C + C QCVC GPDC E CP++CHE G C
Sbjct: 375 ACPHACHGHGRCDEGQCVCDEGFAGPDCSERRCPSDCHE---RGRC 417
Score = 114 (45.2 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SCP C ++ C+N CVC TG DC+E CP +C + G C
Sbjct: 499 SCPHDCHQHGRCVNGMCVCDDAYTGEDCRELRCPGDCSQ---RGRC 541
Score = 113 (44.8 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C C++ +C C P G DC E CP++CH+ HG C
Sbjct: 469 CPSDCHGRGRCVDGRCECQPGFQGDDCGEMSCPHDCHQ---HGRC 510
Score = 109 (43.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C + C++ +CVC GPDC + CP CH G C
Sbjct: 531 CPGDCSQRGRCVDGRCVCEDGFAGPDCADLACPGNCH---GRGRC 572
Score = 103 (41.3 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C E C++ +C C TG DC E CP +C HG C
Sbjct: 407 CPSDCHERGRCVDGRCECNDGFTGADCGELQCPRDCS---GHGRC 448
Score = 103 (41.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 46/158 (29%), Positives = 61/158 (38%)
Query: 33 LCYNKCI-YGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWT 88
LC + C G C + C C+ G+TG DC + C C + C++G CDE
Sbjct: 313 LCLHNCHGRGRCV---ENECVCDEGFTGDDCGELVCPNDCFDRGRCLNGTCSCDEGF--- 366
Query: 89 TGDHCQY--CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDS--------ITGECICQD 137
TG+ C C +G+ EG CD G C S + G C C D
Sbjct: 367 TGEDCGQLACPHACHGHGRCDEGQCVCDEGFAGPDCSERRCPSDCHERGRCVDGRCECND 426
Query: 138 NTQGKNC-ERCLPGYYGDPTDGGTCYY-QCMARGMLTG 173
G +C E P D + G C QC+ TG
Sbjct: 427 GFTGADCGELQCPR---DCSGHGRCVNGQCVCDEGYTG 461
Score = 79 (32.9 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNE 335
SCP+ C C++ +CVC TG DC + P +
Sbjct: 623 SCPNDCSNWGQCVSGRCVCNEGYTGEDCSQVSPPKD 658
>UNIPROTKB|P98160 [details] [associations]
symbol:HSPG2 "Basement membrane-specific heparan sulfate
proteoglycan core protein" species:9606 "Homo sapiens" [GO:0001525
"angiogenesis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005796 "Golgi
lumen" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006024 "glycosaminoglycan biosynthetic process" evidence=TAS]
[GO:0006027 "glycosaminoglycan catabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0042157
"lipoprotein metabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
Reactome:REACT_111217 InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005886 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0008104
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0005975 GO:GO:0070062 InterPro:IPR003598 SMART:SM00408
DrugBank:DB00102 GO:GO:0006629 GO:GO:0030198 GO:GO:0001525
GO:GO:0042157 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0043202
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0005796 GO:GO:0030204 GO:GO:0006024 GO:GO:0006027
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 Pfam:PF12661 EMBL:AL590556
DrugBank:DB00039 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 EMBL:AL590103 EMBL:M85289 EMBL:X62515
EMBL:L22078 EMBL:AL445795 EMBL:S76436 EMBL:M64283 IPI:IPI00024284
PIR:A38096 RefSeq:NP_005520.4 UniGene:Hs.562227 PDB:3SH4 PDB:3SH5
PDBsum:3SH4 PDBsum:3SH5 ProteinModelPortal:P98160 SMR:P98160
IntAct:P98160 MINT:MINT-123304 STRING:P98160 PhosphoSite:P98160
DMDM:218512120 DOSAC-COBS-2DPAGE:P98160 PaxDb:P98160 PRIDE:P98160
Ensembl:ENST00000374695 GeneID:3339 KEGG:hsa:3339 UCSC:uc001bfj.3
CTD:3339 GeneCards:GC01M022148 H-InvDB:HIX0023554
H-InvDB:HIX0023598 HGNC:HGNC:5273 HPA:CAB009820 HPA:CAB020718
HPA:HPA018892 MIM:142461 MIM:224410 MIM:255800 neXtProt:NX_P98160
Orphanet:1865 Orphanet:800 PharmGKB:PA29537 eggNOG:NOG258321
HOGENOM:HOG000049276 HOVERGEN:HBG008174 InParanoid:P98160 KO:K06255
OMA:GVTQQCA OrthoDB:EOG44QT00 ChiTaRS:HSPG2 GenomeRNAi:3339
NextBio:13216 ArrayExpress:P98160 Bgee:P98160 CleanEx:HS_HSPG2
Genevestigator:P98160 GermOnline:ENSG00000142798 Uniprot:P98160
Length = 4391
Score = 205 (77.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 52/140 (37%), Positives = 69/140 (49%)
Query: 43 CKGPPDY---SCQ-CELGWT----GV---DCSVNCLCNNHSTCVHG-IGICDECHDWTTG 90
C+ PP Y SCQ C G+T G+ C + C CN HS H G C +C G
Sbjct: 1530 CRCPPGYIGLSCQDCAPGYTRTGSGLYLGHCEL-CECNGHSDLCHPETGACSQCQHNAAG 1588
Query: 91 DHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSI-TG--ECI-CQDNTQGK 142
+ C+ C G YG+AT T E C+ C C + N C+S+ G C C+ G+
Sbjct: 1589 EFCELCAPGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQ 1648
Query: 143 NCERCLPGYYGDPT-DGGTC 161
CE+C PGY G+P+ GG C
Sbjct: 1649 YCEQCGPGYVGNPSVQGGQC 1668
Score = 205 (77.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 55/160 (34%), Positives = 72/160 (45%)
Query: 38 CIYGYCKGPPDYSCQ-CELGWTGVDCSV------NCLCNNHS-TCVHGIGICDECHDWTT 89
C GY +GP SCQ C+ G+T + C C+ HS C G C C T
Sbjct: 1128 CPPGY-RGP---SCQDCDTGYTRTPSGLYLGTCERCSCHGHSEACEPETGACQGCQHHTE 1183
Query: 90 GDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSVLG----VCDSIT-GE--C-ICQDNT 139
G C+ C+ G YG+A T + C+ C C +G+ G C T G C C
Sbjct: 1184 GPRCEQCQPGYYGDAQRGTPQDCQLCPC--YGDPAAGQAAHTCFLDTDGHPTCDACSPGH 1241
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMARGML-TGPGPQG 178
G++CERC PGYYG+P+ G C G + PQG
Sbjct: 1242 SGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQG 1281
Score = 163 (62.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 50/143 (34%), Positives = 61/143 (42%)
Query: 37 KCIYGYCKGPPDYSCQ-CELGWTGVD-------CSVNCLCNNH-STCVHGIGICDECHDW 87
+C GY G SC+ C+ +T V CS C CN H S+C G C C
Sbjct: 732 RCPIGY-SG---LSCESCDAHFTRVPGGPYLGTCS-GCNCNGHASSCDPVYGHCLNCQHN 786
Query: 88 TTGDHCQYCRAGSYGNA--TTQEGCRKCDCN--SHGNSVLGVCDSIT-GE--C-ICQDNT 139
T G C C+AG +G+A T CR C C C T G+ C C
Sbjct: 787 TEGPQCNKCKAGFFGDAMKATATSCRPCPCPYIDASRRFSDTCFLDTDGQATCDACAPGY 846
Query: 140 QGKNCERCLPGYYGDPTD-GGTC 161
G+ CE C PGY G+P GG C
Sbjct: 847 TGRRCESCAPGYEGNPIQPGGKC 869
Score = 134 (52.2 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRK---------CDCNSHGNSVLGVCDSITG 131
CD C +G HC+ C G YGN + + C++ C+C+ G SV CD+ G
Sbjct: 1234 CDACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQG-SVSSQCDA-AG 1291
Query: 132 ECICQDNTQGKNCERCLPGYY 152
+C C+ +G C C P ++
Sbjct: 1292 QCQCKAQVEGLTCSHCRPHHF 1312
Score = 126 (49.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 76 HGIGICDECHDWTTGDHCQYCRAG--SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGEC 133
H + C C +G C+ C A C C+CN H +S CD + G C
Sbjct: 726 HSVEEC-RCPIGYSGLSCESCDAHFTRVPGGPYLGTCSGCNCNGHASS----CDPVYGHC 780
Query: 134 I-CQDNTQGKNCERCLPGYYGD 154
+ CQ NT+G C +C G++GD
Sbjct: 781 LNCQHNTEGPQCNKCKAGFFGD 802
Score = 64 (27.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 271 VLEAKSGVMTI----HYKQGKPSEG-FNATYQIFSCPDKCPENRTCINNQCVCPPRRTGP 325
+L A +G+ T+ Y Q +P+E + + P++ ++ QC CPP GP
Sbjct: 1077 LLMALAGIDTLLIRASYAQ-QPAESRVSGISMDVAVPEETGQDPALEVEQCSCPPGYRGP 1135
Query: 326 DCQE-EICPNECHEFLNHGTCD 346
CQ+ + L GTC+
Sbjct: 1136 SCQDCDTGYTRTPSGLYLGTCE 1157
Score = 63 (27.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 303 DKCPENRTCINNQCVCPPRRTGPDCQE 329
+ C TC +C+C P +GP CQ+
Sbjct: 4151 EPCLHGGTCQGTRCLCLPGFSGPRCQQ 4177
Score = 60 (26.2 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 19/64 (29%), Positives = 26/64 (40%)
Query: 289 SEGFNATYQIFSCPDK-CPENRTCI-----NNQCVCPPRRTGPDCQEEICPNECHE-FLN 341
S+G Y C + C TC+ QC+C G C+ E P + E L+
Sbjct: 4096 SQGIGQCYDSSPCERQPCQHGATCMPAGEYEFQCLCRDGFKGDLCEHEENPCQLREPCLH 4155
Query: 342 HGTC 345
GTC
Sbjct: 4156 GGTC 4159
Score = 53 (23.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 224 PDINVPCN-ENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
P NV N + +VYI G PD T GG S G C +++
Sbjct: 4320 PGPNVAVNAKGSVYI-GGAPDVATLTGGRFSSGITG--CVKNL 4359
Score = 52 (23.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 297 QIFSC-PDKCPENRTCINNQ------CVCPPRRTGPDCQEEI 331
Q C P+ C + TC+N C C R+G C+E +
Sbjct: 3884 QALHCHPEACGPDATCVNRPDGRGYTCRCHLGRSGLRCEEGV 3925
Score = 50 (22.7 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 300 SCPDK-CPENRTCINNQ-----CVCPPRRTGPDCQEEICPNECH 337
+C D+ C C +++ CVCP TG C+ + CH
Sbjct: 3847 TCRDRPCQNGGQCHDSESSSYVCVCPAGFTGSRCEHSQALH-CH 3889
Score = 46 (21.3 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 306 PENRT-CIN-NQCVCPPRRTGPDCQE 329
P NR + +C CPP G CQ+
Sbjct: 1518 PSNRPRALEVEECRCPPGYIGLSCQD 1543
Score = 41 (19.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 323 TGPDCQEEICPNECHEFLNHGTCDLLLTG 351
T DCQ CP E + TC+ L G
Sbjct: 1606 TPEDCQPCACPLTNPENMFSRTCESLGAG 1634
>ZFIN|ZDB-GENE-021226-1 [details] [associations]
symbol:lamb1a "laminin, beta 1a" species:7955 "Danio
rerio" [GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
ZFIN:ZDB-GENE-021226-1 GO:GO:0048471 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007517 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 HSSP:P02468
GO:GO:0050908 GO:GO:0031290 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0007634 HOGENOM:HOG000007552
KO:K05636 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
EMBL:AF468049 IPI:IPI00485526 RefSeq:NP_775382.1 UniGene:Dr.76526
ProteinModelPortal:Q8JHV7 STRING:Q8JHV7 PRIDE:Q8JHV7 GeneID:286830
KEGG:dre:286830 CTD:286830 NextBio:20806481 Bgee:Q8JHV7
Uniprot:Q8JHV7
Length = 1785
Score = 208 (78.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 53/150 (35%), Positives = 65/150 (43%)
Query: 32 SLCYNKCIYGYCK---GPPDYSC-QCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHD 86
S C+ G C+ G C +C G+ G C CN H+ C G C C D
Sbjct: 827 SYCHEAT--GQCECIAGAYGRQCDRCLPGYWGFPNCRPCTCNGHAEQCDPQTGQCLSCRD 884
Query: 87 WTTGDHCQYCRAGSYGNATTQEG--CRKCDCNS---HGNSVLGVC----DSITGECICQD 137
TTG +C+ C G YG+ G CR C C G G C DS C+C
Sbjct: 885 HTTGHNCERCLGGYYGDPVLGSGDHCRPCMCPDGPGSGRQFSGACYKSPDSSQVFCVCNQ 944
Query: 138 NTQGKNCERCLPGYYGDPTD-GGTCY-YQC 165
+G CE C PGYYG+P + GG C QC
Sbjct: 945 GYKGARCEECAPGYYGNPHEVGGECRPCQC 974
Score = 197 (74.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 49/117 (41%), Positives = 55/117 (47%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN 120
DCS + HS C G C EC G C C G +G CR C CN H
Sbjct: 818 DCSPEG--SVHSYCHEATGQC-ECIAGAYGRQCDRCLPGYWGFPN----CRPCTCNGHAE 870
Query: 121 SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCMARGMLTGPG 175
CD TG+C+ C+D+T G NCERCL GYYGDP G G CM GPG
Sbjct: 871 Q----CDPQTGQCLSCRDHTTGHNCERCLGGYYGDPVLGSGDHCRPCMCPD---GPG 920
Score = 181 (68.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 42/128 (32%), Positives = 59/128 (46%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
+ + C +C GY P + +C C+ N + +C G C +C T
Sbjct: 946 YKGARC-EECAPGYYGNPHEVGGECR----PCQCNSNIDMMDPESCDARTGACVKCLYHT 1000
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN------SVLGV-CDSITGECICQDNTQG 141
G+ C CR G YGNA TQ CRKC CN G S CD +G+C+C N G
Sbjct: 1001 EGESCNRCRLGYYGNALTQS-CRKCVCNQMGTVEEMCPSPGNCNCDLTSGQCLCLPNVVG 1059
Query: 142 KNCERCLP 149
++C++C P
Sbjct: 1060 QHCDQCAP 1067
Score = 169 (64.5 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 46/152 (30%), Positives = 68/152 (44%)
Query: 39 IYGYCKGPPDYS---C-QCELGWTGVD-----CSVNCLCNNHSTCVHGIGICDE------ 83
I G C+ P+ C QC+ G G+ C C CN T V G CD
Sbjct: 419 ISGQCRCKPNVEGERCDQCKQGHYGLSEDPLGCQP-CTCNALGT-VPGGSPCDTDSGNCY 476
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C TG +C C +G + +GCR CDC+ HG ++ C ++G+C C+++ G+
Sbjct: 477 CKRLVTGRNCDQCLPQHWGLSNDMDGCRPCDCD-HGGAINNNCSPVSGQCQCREHMFGRR 535
Query: 144 CERCLPGYYGDPTDGGTCYYQCMARGMLTGPG 175
C++ G+Y D +Y A GPG
Sbjct: 536 CDQVESGFYFIALD----HYTYEAEEAKFGPG 563
Score = 164 (62.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 52/187 (27%), Positives = 79/187 (42%)
Query: 50 SCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ- 107
+C+ C C + S V G G+CD+C T G +C+ C+ + +
Sbjct: 328 ACKKCHCNHHSHSCHFDMAVYRASGNVSG-GVCDDCQHNTMGHNCEQCKPFFHQHPEKDI 386
Query: 108 ---EGCRKCDCNSHGNSVLGVCDSIT--------GECICQDNTQGKNCERCLPGYYG--- 153
C C+C+ G+ GVCD +T G+C C+ N +G+ C++C G+YG
Sbjct: 387 RDPNICEPCNCDPVGSLNGGVCDPMTDVSLGLISGQCRCKPNVEGERCDQCKQGHYGLSE 446
Query: 154 DPTDGGTCYYQCMARGMLTGPGPQGLGSGLAE-RNAWEGKDTPSRECL---WIIGQSLDS 209
DP C C A G + G P SG + G++ +CL W G S D
Sbjct: 447 DPLGCQPC--TCNALGTVPGGSPCDTDSGNCYCKRLVTGRNCD--QCLPQHW--GLSNDM 500
Query: 210 NSTAPAD 216
+ P D
Sbjct: 501 DGCRPCD 507
Score = 163 (62.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 66 CLCNNH---ST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
C C+ ST C G C +C G +C C ++ +GCR CDC+ G S
Sbjct: 769 CQCDPQGSLSTVCDPSGGQC-QCRPNVVGRNCDRCAPATF--LFXPQGCRPCDCSPEG-S 824
Query: 122 VLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
V C TG+C C G+ C+RCLPGY+G P
Sbjct: 825 VHSYCHEATGQCECIAGAYGRQCDRCLPGYWGFP 858
Score = 158 (60.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 37/114 (32%), Positives = 54/114 (47%)
Query: 58 TGVDCSVNCLCN-NHS---TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC 113
+G C +C C+ NHS +C +G C C G C+ CR +GN + C C
Sbjct: 1074 SGKGCE-DCDCDPNHSFGSSCNEIMGQCS-CKPGFGGRTCRECRELFWGNPEVK--CHAC 1129
Query: 114 DCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMA 167
DC+ G + C+ +TG C+C + G C+ C GY G+ C+ QC A
Sbjct: 1130 DCDPRGIAEQQ-CNKVTGHCVCVEGVSGPRCDTCARGYTGEFPQCERCH-QCFA 1181
Score = 158 (60.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 45/159 (28%), Positives = 68/159 (42%)
Query: 16 DALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTC 74
DA + V LY C N+C GY SC+ C G +V +C + C
Sbjct: 987 DARTGACVKCLYHTEGESC-NRCRLGYYGNALTQSCRKCVCNQMG---TVEEMCPSPGNC 1042
Query: 75 VHGI--GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
+ G C C G HC C ++ N + +GC CDC+ + +S C+ I G+
Sbjct: 1043 NCDLTSGQC-LCLPNVVGQHCDQCAPDTW-NMASGKGCEDCDCDPN-HSFGSSCNEIMGQ 1099
Query: 133 CICQDNTQGKNCERCLPGYYGDPTDGGTCYY-QCMARGM 170
C C+ G+ C C ++G+P C+ C RG+
Sbjct: 1100 CSCKPGFGGRTCRECRELFWGNPEV--KCHACDCDPRGI 1136
Score = 156 (60.0 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 44/128 (34%), Positives = 62/128 (48%)
Query: 37 KCIYGYCKGPP----DYS--CQCELG-WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTT 89
+C+ GY P D+ C C G +G S C + S+ V C C+
Sbjct: 893 RCLGGYYGDPVLGSGDHCRPCMCPDGPGSGRQFSGACYKSPDSSQV----FC-VCNQGYK 947
Query: 90 GDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSV-LGVCDSITGECI-CQDNTQGKNCER 146
G C+ C G YGN G CR C CNS+ + + CD+ TG C+ C +T+G++C R
Sbjct: 948 GARCEECAPGYYGNPHEVGGECRPCQCNSNIDMMDPESCDARTGACVKCLYHTEGESCNR 1007
Query: 147 CLPGYYGD 154
C GYYG+
Sbjct: 1008 CRLGYYGN 1015
Score = 51 (23.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
CP P N C + QC+C P G C +
Sbjct: 1036 CPS--PGNCNCDLTSGQCLCLPNVVGQHCDQ 1064
Score = 41 (19.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 301 CPD-KCPENRT----C--INNQCVCPPRRTGPDCQE 329
C D C N + C I QC C P G C+E
Sbjct: 1078 CEDCDCDPNHSFGSSCNEIMGQCSCKPGFGGRTCRE 1113
Score = 40 (19.1 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 14/42 (33%), Positives = 15/42 (35%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTG-VH 353
QC C P G +C C F G CD G VH
Sbjct: 787 QCQCRPNVVGRNCDR--CAPATFLFXPQGCRPCDCSPEGSVH 826
Score = 38 (18.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 312 INNQCVCPPRRTGPDC 327
+ CVC +GP C
Sbjct: 1144 VTGHCVCVEGVSGPRC 1159
>WB|WBGene00002248 [details] [associations]
symbol:lam-3 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030155 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
HSSP:P02468 Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 KO:K05637 GO:GO:0005606 EMBL:Z81125
EMBL:AF074902 EMBL:AL008585 PIR:F87908 PIR:T23064 PIR:T43291
RefSeq:NP_492775.2 UniGene:Cel.19655 ProteinModelPortal:G5ECE3
SMR:G5ECE3 EnsemblMetazoa:T22A3.8 GeneID:172952
KEGG:cel:CELE_T22A3.8 CTD:172952 WormBase:T22A3.8 OMA:TAINEAH
NextBio:877661 Uniprot:G5ECE3
Length = 3102
Score = 203 (76.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 50/132 (37%), Positives = 67/132 (50%)
Query: 61 DCSVNCLC-NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ-EG--CRKCDCN 116
D S+ L + T + G+ +C EC + G+ C+ C G Y Q G C KCDC
Sbjct: 720 DTSLKALAYHTQDTLMGGVEVC-ECPENFAGNSCESCVPG-YRRVNNQLYGGRCEKCDC- 776
Query: 117 SHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGG---TCYYQCMARGMLT 172
HGNS CD TGEC+ C+ NT G CE C PG+ G+P+ GG C QC +
Sbjct: 777 -HGNSE--ECDPFTGECLNCRHNTTGSRCELCKPGHVGNPSRGGELGACE-QCECPSLDL 832
Query: 173 GPGPQGLGSGLA 184
P P+ + + LA
Sbjct: 833 NPNPECISTELA 844
Score = 201 (75.8 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 59/181 (32%), Positives = 79/181 (43%)
Query: 7 ISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCE----LGWTGVDC 62
++GL+T K + +C S C N + Y K +Y Q + +GW
Sbjct: 1483 VAGLSTTKAIGVEKCLGCPQGYTGLS-CQNPEVGYYRKKHREYLNQADDIALIGW----- 1536
Query: 63 SVNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT--QEGCRKCDC---- 115
S C C+ HS TC +C +C T GD C++C G G+A C KC C
Sbjct: 1537 SEPCSCHGHSQTCNPDTSVCTDCEHNTFGDFCEHCLPGYIGDAREGGANACTKCACPLVE 1596
Query: 116 NSHGNSVLGVCDSITGEC-ICQDNTQGKNCERCLPGYYGDPTD-GGTCY-YQCMARGMLT 172
NS +S + V C C+ G+ CE C+ GYYGDP GGTC C G L
Sbjct: 1597 NSFSDSCVAVDHGRGYVCNSCKPGYTGQYCETCVAGYYGDPQHIGGTCSPCDCHPDGSLH 1656
Query: 173 G 173
G
Sbjct: 1657 G 1657
Score = 194 (73.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 46/142 (32%), Positives = 66/142 (46%)
Query: 43 CK-GPPDYSC-QCE---LGWTGVDCSVNCLCNNHST-----CVHGIGICDECHDWTTGDH 92
CK G C QC +T C C CN + + C G C EC + G
Sbjct: 1009 CKQGVFGKQCDQCRPSYFNFTDAGCQF-CHCNIYGSIEDGKCDQTTGKC-ECRENVEGTM 1066
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ C G Y N T+ +GC C C+ G+ + C+ +TG+C+C+ G C+ CLP +Y
Sbjct: 1067 CEKCADG-YFNITSGDGCEDCGCDPTGSEDVS-CNLVTGQCVCKPGVTGLKCDSCLPNFY 1124
Query: 153 GDPTDGGTCYYQCMARGMLTGP 174
G ++G T C A G + P
Sbjct: 1125 GLTSEGCTECEPCPAPGQVCDP 1146
Score = 180 (68.4 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 46/131 (35%), Positives = 63/131 (48%)
Query: 41 GYCKGPPDY---SC-QCELGWTGVD--CSVNCLCNNH----STCVHGIGICDECHDWTTG 90
G C+ +Y C +C+ V+ C C CN+ S C G C+ C G
Sbjct: 958 GECECKENYIGAQCDRCKENHGDVENGCPA-CDCNDTGSIGSDCDQVSGQCN-CKQGVFG 1015
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
C CR SY N T GC+ C CN +G+ G CD TG+C C++N +G CE+C G
Sbjct: 1016 KQCDQCRP-SYFNFT-DAGCQFCHCNIYGSIEDGKCDQTTGKCECRENVEGTMCEKCADG 1073
Query: 151 YYGDPTDGGTC 161
Y+ + T G C
Sbjct: 1074 YF-NITSGDGC 1083
Score = 169 (64.5 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 46/135 (34%), Positives = 64/135 (47%)
Query: 33 LCYNKCIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICD-------E 83
+C N C GY +Y E TG C + C CN + + GIG CD +
Sbjct: 857 VCIN-CPLGYEGNKCEYCSDGFFEDPLTG-KC-IECTCNGNIDPM-GIGNCDSETGKCLK 912
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C TTGD C+ C+ +GNA C+ C C++ G +V C GEC C++N G
Sbjct: 913 CIGHTTGDSCESCKEHHWGNAQLHT-CKPCGCHTQG-AVNPQCSEENGECECKENYIGAQ 970
Query: 144 CERCLPGYYGDPTDG 158
C+RC + GD +G
Sbjct: 971 CDRCKENH-GDVENG 984
Score = 168 (64.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 34 CYNKCIYGYCKGP-PDYSCQCELGWTGVDCSVNCLC----NNHS-TCV---HGIG-ICDE 83
C + +C+ P Y G G + C C N+ S +CV HG G +C+
Sbjct: 1559 CEHNTFGDFCEHCLPGYIGDAREG--GANACTKCACPLVENSFSDSCVAVDHGRGYVCNS 1616
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C TG +C+ C AG YG+ G C CDC+ G S+ G C+ ++G+C C+ G+
Sbjct: 1617 CKPGYTGQYCETCVAGYYGDPQHIGGTCSPCDCHPDG-SLHGACNPLSGQCECKPGVTGR 1675
Query: 143 NCERC 147
C C
Sbjct: 1676 TCSMC 1680
Score = 144 (55.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGI---------G-ICDE------CHDWTTGDHCQ 94
C C+ G TG+ C +CL N + G G +CD C T G+ C+
Sbjct: 1105 CVCKPGVTGLKCD-SCLPNFYGLTSEGCTECEPCPAPGQVCDPIDGSCVCPPNTVGEMCE 1163
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
C ++ + GC+ CDC+ G+ G+C++ TG+C C+ G C+ C G++
Sbjct: 1164 NCTTNAW-DYHPLNGCKLCDCSDIGSDG-GMCNTFTGQCKCKAAYVGLKCDLCTHGFFNF 1221
Query: 155 PT 156
PT
Sbjct: 1222 PT 1223
Score = 141 (54.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 36/93 (38%), Positives = 46/93 (49%)
Query: 77 GIGICDECHDWTTGDHCQYCRAGSY---GNATTQE-GCRKCDCNSHGNSVLGVC---DSI 129
G G C EC T G +C+ C+ G Y G + +E CR C+C+ G SV C D
Sbjct: 383 GGGRCLECAHNTEGFNCERCKDGYYRPSGLSHYREDACRTCECDPVG-SVSDACVRDDQS 441
Query: 130 T------GECICQDNTQGKNCERCLPGYYGDPT 156
G+CIC+ G+ CERC PGY PT
Sbjct: 442 AENGQKPGDCICKPGFGGRRCERCAPGYRNHPT 474
Score = 140 (54.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 42/118 (35%), Positives = 52/118 (44%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTG 90
++C KC GY C+ C TG + V+C N T G C C TG
Sbjct: 1065 TMC-EKCADGYFNITSGDGCEDCGCDPTGSE-DVSC---NLVT-----GQC-VCKPGVTG 1113
Query: 91 DHCQYCRAGSYGNATTQEGCRKCD-CNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
C C YG T EGC +C+ C + G VCD I G C+C NT G+ CE C
Sbjct: 1114 LKCDSCLPNFYG--LTSEGCTECEPCPAPGQ----VCDPIDGSCVCPPNTVGEMCENC 1165
Score = 116 (45.9 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 44/150 (29%), Positives = 66/150 (44%)
Query: 14 KDDALSRCTVLLLYIFNAS--LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNH 71
K D+L + +V + Y ++ S +CI C G + SC + TG C C H
Sbjct: 271 KSDSLDK-SVTMRYFYSISDISIGGQCI---CYGHAE-SCPSD-PVTG---QFKCECR-H 320
Query: 72 STCVHGIGICDECHD---WTTG--DH---CQYCRAGSYGNATTQEGCRKCDCNSHGNSVL 123
+TC C + W G H CQ C+ ++ ++ + + D N +
Sbjct: 321 NTCGESCNRCCPLFNQLPWKPGTNSHPNVCQQCQCFNHAHSCVYDD--ELDRNKWSITPE 378
Query: 124 GVCDSITGECI-CQDNTQGKNCERCLPGYY 152
GV + G C+ C NT+G NCERC GYY
Sbjct: 379 GVYEG-GGRCLECAHNTEGFNCERCKDGYY 407
Score = 61 (26.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 303 DKCPE-NRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDL 347
+ CP + C I+ CVCPP G C+ C ++ C L
Sbjct: 1135 EPCPAPGQVCDPIDGSCVCPPNTVGEMCEN--CTTNAWDYHPLNGCKL 1180
Score = 58 (25.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 312 INNQCVCPPRRTGPDCQEEICPNECHEFLNH--GTCD 346
++ QC C P TG C +C E H F+N +CD
Sbjct: 1662 LSGQCECKPGVTGRTCS--MC-QERHAFINRVCTSCD 1695
Score = 55 (24.4 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
C E+ +C + QCVC P TG C + PN
Sbjct: 1088 CDPTGSEDVSCNLVTGQCVCKPGVTGLKC-DSCLPN 1122
Score = 50 (22.7 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 303 DKCPENRTCINNQC-VCPPRRTGP---DCQEEICPNECHEFLNHGTCD 346
D+C EN + N C C TG DC + C + + CD
Sbjct: 972 DRCKENHGDVENGCPACDCNDTGSIGSDCDQVSGQCNCKQGVFGKQCD 1019
Score = 44 (20.5 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 13/38 (34%), Positives = 14/38 (36%)
Query: 310 TCINNQCVCPPR-RTGPDCQEEICPNECHEFLNHGTCD 346
TC C C + P C EE EC E CD
Sbjct: 937 TC--KPCGCHTQGAVNPQCSEENGECECKENYIGAQCD 972
>UNIPROTKB|F1SAE9 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:NTWQLAS EMBL:CU929844
Ensembl:ENSSSCT00000016825 Uniprot:F1SAE9
Length = 1799
Score = 212 (79.7 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 48/132 (36%), Positives = 64/132 (48%)
Query: 49 YSCQCEL---GWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNA 104
Y+ QC+ G+ G C CN H+ C G C C D+TTG +C+ C AG YG+A
Sbjct: 860 YARQCDRCLPGYWGFPSCQPCQCNGHAEDCDSVTGECSSCQDYTTGHNCERCLAGYYGDA 919
Query: 105 TTQEG--CRKCDCNS---HGNSVLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGDP 155
G CR C C G C D +T + C+C G CE C G++G+P
Sbjct: 920 IIGSGDHCRPCPCPDGPESGRQFASSCYQDPVTLQLACVCNPGYIGSRCEDCAAGFFGNP 979
Query: 156 TD-GGTCY-YQC 165
++ GGTC QC
Sbjct: 980 SEVGGTCQPCQC 991
Score = 195 (73.7 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 45/124 (36%), Positives = 57/124 (45%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
S C + C G+ P + C+ C N + C G C +C T G
Sbjct: 966 SRCED-CAAGFFGNPSEVGGTCQ----PCQCHHNIDTTDPEACDKETGRCLKCLYHTEGV 1020
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCN------SHGNSVLGVCDSITGECICQDNTQGKNCE 145
HCQ CR G YG+A Q+ CRKC CN H N CD TG+C+C N G+NC+
Sbjct: 1021 HCQLCRLGYYGDALQQD-CRKCVCNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCD 1079
Query: 146 RCLP 149
RC P
Sbjct: 1080 RCAP 1083
Score = 183 (69.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 37/108 (34%), Positives = 53/108 (49%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+S L TG+ C + + S C G C +C G C C G++G
Sbjct: 773 FSISALLHQTGLACECDPQGSLSSVCDPNGGQC-QCRPNVVGRKCDRCAPGTFGFGPN-- 829
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
GC+ C+C+ G SV CD +TG+C C + C+RCLPGY+G P+
Sbjct: 830 GCKPCECHLQG-SVNAFCDPVTGQCHCFQGVYARQCDRCLPGYWGFPS 876
Score = 172 (65.6 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 40/97 (41%), Positives = 46/97 (47%)
Query: 63 SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV 122
SVN C+ + G C C C C G +G + C+ C CN H
Sbjct: 841 SVNAFCDPVT------GQC-HCFQGVYARQCDRCLPGYWGFPS----CQPCQCNGHAED- 888
Query: 123 LGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDG 158
CDS+TGEC CQD T G NCERCL GYYGD G
Sbjct: 889 ---CDSVTGECSSCQDYTTGHNCERCLAGYYGDAIIG 922
Score = 165 (63.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 35/99 (35%), Positives = 50/99 (50%)
Query: 67 LCNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVL 123
+C+ ++ G+ G C C G+HC C+ G YG A GC+ C CN G
Sbjct: 423 ICDGYTDFSAGLIAGQC-RCKLHVEGEHCDICKEGFYGLTAEDPFGCKSCACNPLGTIPG 481
Query: 124 G-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G CDS TG C C+ G++C++CLP ++G D C
Sbjct: 482 GNPCDSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGC 520
Score = 157 (60.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 37/114 (32%), Positives = 54/114 (47%)
Query: 58 TGVDCSVNCLCNN-HS---TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC 113
+G C C C+ HS +C G C +C G C C+ +G+ + + CR C
Sbjct: 1090 SGTGCEP-CNCDAAHSFGPSCNEFTGQC-QCMPGFGGRTCSECQELFWGDPSVE--CRAC 1145
Query: 114 DCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMA 167
DC+ G CD TG+C+C + +G C++C GY G D C+ QC A
Sbjct: 1146 DCDPRGIET-PQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPDCTPCH-QCFA 1197
Score = 151 (58.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 45/160 (28%), Positives = 68/160 (42%)
Query: 29 FNASLCYNKCIYGYCKGPPDYS-CQ-CELGWTGVDCS-----VNCLCNNHSTCVHGIGIC 81
F+A L +C CK + C C+ G+ G+ +C CN T + G C
Sbjct: 430 FSAGLIAGQC---RCKLHVEGEHCDICKEGFYGLTAEDPFGCKSCACNPLGT-IPGGNPC 485
Query: 82 DE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECIC 135
D C TG HC C +G + +GCR CDC+ G ++ C + +G+C+C
Sbjct: 486 DSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDL-GGALNNSCSAESGQCLC 544
Query: 136 QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPG 175
+ + G+ C G+Y D +Y A GPG
Sbjct: 545 RPHMIGRQCNEVESGFYFTTLD----HYIYEAEEANFGPG 580
Score = 146 (56.5 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 39/139 (28%), Positives = 60/139 (43%)
Query: 66 CLCNNHSTCVH---GI---------GICDECHDWTTGDHCQYCRAGSYGNATTQEG---- 109
C CN HS+ H + G+CD+C T G +C+ C+ Y +
Sbjct: 348 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCERCKPFYYQHPERDVRDPNL 407
Query: 110 CRKCDCNSHGNSVLGVCDSIT--------GECICQDNTQGKNCERCLPGYYG----DPTD 157
C C C+ G+ G+CD T G+C C+ + +G++C+ C G+YG DP
Sbjct: 408 CEPCTCDPAGSQNGGICDGYTDFSAGLIAGQCRCKLHVEGEHCDICKEGFYGLTAEDPFG 467
Query: 158 GGTCYYQCMARGMLTGPGP 176
+C C G + G P
Sbjct: 468 CKSC--ACNPLGTIPGGNP 484
Score = 140 (54.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSV-LGVCDSITGECI-CQDNTQ 140
C+ G C+ C AG +GN + G C+ C C+ + ++ CD TG C+ C +T+
Sbjct: 959 CNPGYIGSRCEDCAAGFFGNPSEVGGTCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTE 1018
Query: 141 GKNCERCLPGYYGD 154
G +C+ C GYYGD
Sbjct: 1019 GVHCQLCRLGYYGD 1032
Score = 130 (50.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 48/159 (30%), Positives = 68/159 (42%)
Query: 10 LTTAKDDAL-SRCTVLLLYIFNASLCYNKCIYG--YCKGPPDYSCQCELGWTGVDCSVNC 66
L T D+ L SR + Y + Y+ + G +C G ++ +C G V
Sbjct: 253 LHTLGDNLLDSRMEIREKYYYAV---YDMVVRGNCFCYG---HASECA-PVDGFSEEVEG 305
Query: 67 LCNNHSTCVHGI-GI-CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV-- 122
+ + H C H G+ C+ C D+ H R N+ C+KC+CN H +S
Sbjct: 306 MVHGHCMCRHNTKGLNCELCMDFY---HDLPWRPAEGRNSNA---CKKCNCNEHSSSCHF 359
Query: 123 -----LGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
L + G C CQ NT G+NCERC P YY P
Sbjct: 360 DMAVYLATGNVSGGVCDDCQHNTMGRNCERCKPFYYQHP 398
Score = 49 (22.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 308 NRTCI--NNQCVCPPRRTGPDCQE 329
N +C + QC+C P G C E
Sbjct: 532 NNSCSAESGQCLCRPHMIGRQCNE 555
Score = 45 (20.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPN 334
C ++T QC+C P G +C + PN
Sbjct: 1058 CQCDKT--TGQCLCLPNVIGQNC-DRCAPN 1084
Score = 42 (19.8 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQE 329
C ++ + CVC P G C++
Sbjct: 946 CYQDPVTLQLACVCNPGYIGSRCED 970
Score = 40 (19.1 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 301 CPDKCPENRTCINN--QCVCPPRRTGPDCQE 329
C + E C + QCVC GP C +
Sbjct: 1147 CDPRGIETPQCDQSTGQCVCVEGVEGPRCDK 1177
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/56 (28%), Positives = 20/56 (35%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQV--DLIRC 369
C C P T P N C + C L+TG H H+ + DL C
Sbjct: 471 CACNPLGTIPG------GNPCDSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGC 520
Score = 38 (18.4 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 315 QCVCPPR---RTGPDCQE 329
QC C P RT +CQE
Sbjct: 1115 QCQCMPGFGGRTCSECQE 1132
>UNIPROTKB|F1PFM5 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050873 "brown fat cell differentiation"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005610 GeneTree:ENSGT00620000087753 OMA:RSQMEED
EMBL:AAEX03005067 EMBL:AAEX03005068 Ensembl:ENSCAFT00000018923
Uniprot:F1PFM5
Length = 1171
Score = 203 (76.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 43/111 (38%), Positives = 61/111 (54%)
Query: 61 DCSVNCLCNNHS-TC------------VHGIGICDECHDWTTGDHCQYCRAGSYGN---- 103
+C C CN HS TC HG G+CD C D T G +C+ C+ + N
Sbjct: 312 ECQ-RCDCNGHSETCHFDPAVFAASQGAHG-GVCDNCRDHTEGKNCERCQLHYFRNRRPG 369
Query: 104 ATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCLPGYYG 153
A QE C C+C+ G +V GV CD +TG+C+C+++ QG+ C+ C PG+ G
Sbjct: 370 APIQETCIPCECDPDG-AVPGVPCDPVTGQCVCKEHVQGERCDLCKPGFTG 419
Score = 145 (56.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 28/84 (33%), Positives = 40/84 (47%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C C + G+ C C+ G G +GC +CDCN G+ CD TG+C+C
Sbjct: 397 GQC-VCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDLPCDEETGQCLCLP 455
Query: 138 NTQGKNCERCLPGYYGDPTDGGTC 161
+ G C++C P Y+ G C
Sbjct: 456 HVVGPKCDQCAP-YHWKLASGRGC 478
Score = 143 (55.4 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 46/160 (28%), Positives = 65/160 (40%)
Query: 8 SGLTTAKDDALSRCTVLLLYIFNASLC---YNKCI-YGYCKGPPDYSCQCELGW---TGV 60
+GLT A RC +L C +C+ + GP C W +G
Sbjct: 418 TGLTYANPQGCHRCDCNILGSRRDLPCDEETGQCLCLPHVVGPKCDQC-APYHWKLASGR 476
Query: 61 DCSVNCLCNNHST----CVHGIGICDECHDWTTGDHC-----QYCRAGSYGNATTQEGCR 111
C C C+ H+ C G C C + G C + C +YG+A + GCR
Sbjct: 477 GCEP-CACDPHNALSPQCNQFTGQCP-CREGFGGLTCNAAALRQCPDRTYGDAGS--GCR 532
Query: 112 KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
CDC+ G G CD +G C+C+ G C++C GY
Sbjct: 533 ACDCDFRGTEGPG-CDKASGRCLCRPGLTGPRCDQCQRGY 571
Score = 125 (49.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/107 (32%), Positives = 50/107 (46%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRAGSYGN-----ATTQEG--CRKCDCNSHGNS------ 121
VH + +C H+ T G +C+ C A Y N A Q+ C++CDCN H +
Sbjct: 275 VHDVCVCQ--HN-TAGPNCERC-APFYNNQPWRPADDQDPHECQRCDCNGHSETCHFDPA 330
Query: 122 VLGVCDSITGE-CI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
V G C C+D+T+GKNCERC Y+ + G C+
Sbjct: 331 VFAASQGAHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPIQETCI 377
Score = 50 (22.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
C + E C + +C+C P TGP C +
Sbjct: 536 CDFRGTEGPGCDKASGRCLCRPGLTGPRCDQ 566
Score = 48 (22.0 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 315 QCVCPPRRTGPDCQE 329
QC+C P GP C +
Sbjct: 450 QCLCLPHVVGPKCDQ 464
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/68 (30%), Positives = 22/68 (32%)
Query: 306 PENRTCINNQCVCPPRRTGPD--CQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQ 363
P TCI C C P P C C E + CDL G T G T
Sbjct: 371 PIQETCI--PCECDPDGAVPGVPCDPVTGQCVCKEHVQGERCDLCKPG--FT-GLTYANP 425
Query: 364 VDLIRCTC 371
RC C
Sbjct: 426 QGCHRCDC 433
>RGD|2988 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005604 "basement membrane" evidence=IEA;ISO] [GO:0005605 "basal
lamina" evidence=ISO] [GO:0005608 "laminin-3 complex" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0007528 "neuromuscular junction development"
evidence=ISO] [GO:0007601 "visual perception" evidence=ISO]
[GO:0014002 "astrocyte development" evidence=ISO] [GO:0014044
"Schwann cell development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043256 "laminin complex"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO] [GO:0048677 "axon
extension involved in regeneration" evidence=ISO] [GO:0050808
"synapse organization" evidence=ISO] [GO:0060041 "retina development
in camera-type eye" evidence=ISO] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=ISO] [GO:0072274
"metanephric glomerular basement membrane development" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] RGD:2988
GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
CTD:3913 KO:K06243 EMBL:X16563 IPI:IPI00212868 PIR:S03539
RefSeq:NP_037106.1 UniGene:Rn.774 ProteinModelPortal:P15800
PhosphoSite:P15800 PRIDE:P15800 GeneID:25473 KEGG:rno:25473
NextBio:606781 Genevestigator:P15800 Uniprot:P15800
Length = 1801
Score = 197 (74.4 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 37/90 (41%), Positives = 51/90 (56%)
Query: 68 CNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLG 124
C++H V G+ G C C + G CQ CR G +G +A+ GC++C CNS G G
Sbjct: 426 CDSHDDPVLGLVSGQC-RCKEHVVGTRCQQCRDGFFGLSASNPRGCQRCQCNSRGTVPGG 484
Query: 125 V-CDSITGECICQDNTQGKNCERCLPGYYG 153
CDS +G C C+ G C+RCLPG++G
Sbjct: 485 TPCDSSSGTCFCKRLVTGDGCDRCLPGHWG 514
Score = 185 (70.2 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 52/161 (32%), Positives = 71/161 (44%)
Query: 31 ASLCYNKCIYGYCK-GPPDYSCQ-CELG-WTGVDCSVNCLCNNHST-CVHGIGICDECHD 86
++LC C+ G C C+ G W +C C+CN + C G C C D
Sbjct: 843 SALCEGTSGQCLCRTGAFGLRCDHCQRGQWGFPNCRP-CVCNGRADECDAHTGACLGCRD 901
Query: 87 WTTGDHCQYCRAGSYGNATTQEG--CRKCDCNSHGNS---VLGVC--DSITGE--CICQD 137
+T G+HC+ C AG +G+ G CR C C S C D + + C C+
Sbjct: 902 YTGGEHCERCIAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGYSQQIVCHCRA 961
Query: 138 NTQGKNCERCLPGYYGDPTD-GGTCYYQCMARGML--TGPG 175
G CE C PG++GDP+ GG C C G + T PG
Sbjct: 962 GYTGLRCEACAPGHFGDPSKPGGRCQL-CECSGNIDPTDPG 1001
Score = 184 (69.8 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 46/149 (30%), Positives = 69/149 (46%)
Query: 49 YSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
++C+ CE C + S V G G+CD C T G HC+ CR Y + T
Sbjct: 345 HACRKCECNGHSHSCHFDMAVYLASGNVSG-GVCDGCQHNTAGRHCELCRPFFYRDPTKD 403
Query: 108 ----EGCRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYYG-D 154
CR CDC+ G+ G CDS ++G+C C+++ G C++C G++G
Sbjct: 404 MRDPAACRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLS 463
Query: 155 PTDGGTCYY-QCMARGMLTGPGPQGLGSG 182
++ C QC +RG + G P SG
Sbjct: 464 ASNPRGCQRCQCNSRGTVPGGTPCDSSSG 492
Score = 174 (66.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 42/131 (32%), Positives = 59/131 (45%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
C G+ P +C+L +CS N + C G C C T G HC +C+
Sbjct: 971 CAPGHFGDPSKPGGRCQL----CECSGNIDPTDPGACDPHTGQCLRCLHHTEGPHCGHCK 1026
Query: 98 AGSYGNATTQEGCRKCDCNSHG-------NSVLGVCDSITGECICQDNTQGKNCERCLPG 150
G +G A Q C +C CN G ++ L CD TG+C C + QG +C+RC P
Sbjct: 1027 PGFHGQAARQS-CHRCTCNLLGTDPQRCPSTDLCHCDPSTGQCPCLPHVQGLSCDRCAPN 1085
Query: 151 YYGDPTDGGTC 161
++ T G C
Sbjct: 1086 FWNF-TSGRGC 1095
Score = 171 (65.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 40/112 (35%), Positives = 54/112 (48%)
Query: 52 QCELGWTGVDCS-----VNCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGS 100
QC G+ G+ S C CN+ T V G CD C TGD C C G
Sbjct: 454 QCRDGFFGLSASNPRGCQRCQCNSRGT-VPGGTPCDSSSGTCFCKRLVTGDGCDRCLPGH 512
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G + GCR CDC+ G ++ CD TG+C C+ + G+ CE+ PGY+
Sbjct: 513 WGLSHDLLGCRPCDCDV-GGALDPQCDEATGQCPCRPHMIGRRCEQVQPGYF 563
Score = 165 (63.1 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 49/147 (33%), Positives = 63/147 (42%)
Query: 43 CK-GPPDYSCQ-CELGWTG---VDCSVNCLCNNHST----CVHGIGICDECHDWTTGDHC 93
CK G C C G+ G C C C+ C G C C G C
Sbjct: 807 CKPGVVGRRCDACATGYYGFGPAGCQA-CQCSPDGALSALCEGTSGQC-LCRTGAFGLRC 864
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYY 152
+C+ G +G CR C CN + CD+ TG C+ C+D T G++CERC+ G++
Sbjct: 865 DHCQRGQWGFPN----CRPCVCNGRADE----CDAHTGACLGCRDYTGGEHCERCIAGFH 916
Query: 153 GDPT--DGGTCYYQCMARGMLTGPGPQ 177
GDP GG C C GPG Q
Sbjct: 917 GDPRLPYGGQCR-PCPCP---EGPGSQ 939
Score = 137 (53.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 39/125 (31%), Positives = 52/125 (41%)
Query: 49 YSCQCEL-GWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+ C C L G C LC+ C G C C G C C A ++ N T+
Sbjct: 1039 HRCTCNLLGTDPQRCPSTDLCH----CDPSTGQCP-CLPHVQGLSCDRC-APNFWNFTSG 1092
Query: 108 EGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYY-QC 165
GC+ C C H + G C+ TG+C C G+ C C ++GDP G C C
Sbjct: 1093 RGCQPCAC--HPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELHWGDP--GLQCRACDC 1148
Query: 166 MARGM 170
RG+
Sbjct: 1149 DPRGI 1153
Score = 130 (50.8 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 36/97 (37%), Positives = 51/97 (52%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRAGSYGNAT---TQEG----CRKCDCNSHGNS------ 121
VHG IC H+ T G +C+ C+ Y + ++G CRKC+CN H +S
Sbjct: 309 VHGACICK--HN-TRGLNCEQCQ-DFYQDLPWHPAEDGHTHACRKCECNGHSHSCHFDMA 364
Query: 122 VLGVCDSITGE-CI-CQDNTQGKNCERCLPGYYGDPT 156
V +++G C CQ NT G++CE C P +Y DPT
Sbjct: 365 VYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPT 401
Score = 127 (49.8 bits), Expect = 0.00026, P = 0.00026
Identities = 40/136 (29%), Positives = 53/136 (38%)
Query: 30 NASLCYNKCIYGYCKGPPDY---SC-QCELG-W---TGVDCSVNCLCN----NHSTCVHG 77
+ LC+ G C P SC +C W +G C C C+ TC
Sbjct: 1055 STDLCHCDPSTGQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQP-CACHPSRARGPTCNEF 1113
Query: 78 IGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C CH G C C+ +G+ Q CR CDC+ G C TG C C+
Sbjct: 1114 TGQC-HCHAGFGGRTCSECQELHWGDPGLQ--CRACDCDPRGIDK-PQCHRSTGHCSCRP 1169
Query: 138 NTQGKNCERCLPGYYG 153
G C++C G+ G
Sbjct: 1170 GVSGVRCDQCARGFSG 1185
Score = 61 (26.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 20/57 (35%), Positives = 21/57 (36%)
Query: 297 QIFSCPDKCPEN-------RTCINNQCVCPPRRT-GPDCQEEICPNECHEFLNHGTC 345
Q SC D+C N R C C C P R GP C E CH TC
Sbjct: 1075 QGLSC-DRCAPNFWNFTSGRGC--QPCACHPSRARGPTCNEFTGQCHCHAGFGGRTC 1128
Score = 56 (24.8 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVH 353
QC C P G C E++ P FL+H T + G H
Sbjct: 543 QCPCRPHMIGRRC-EQVQPGYFRPFLDHLTWEA--EGAH 578
Score = 37 (18.1 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 326 DCQEE-ICPNECHEFLNHGTCDLLLTGV 352
DC I +CH H +C ++GV
Sbjct: 1147 DCDPRGIDKPQCHRSTGHCSCRPGVSGV 1174
>FB|FBgn0002526 [details] [associations]
symbol:LanA "Laminin A" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007422 "peripheral nervous system development" evidence=NAS]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0035001 "dorsal trunk
growth, open tracheal system" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016321
"female meiosis chromosome segregation" evidence=IMP] [GO:0007498
"mesoderm development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0001964 "startle
response" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IMP] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0002121 "inter-male aggressive
behavior" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0035011 "melanotic encapsulation
of foreign target" evidence=IMP] [GO:0036062 "presynaptic
periactive zone" evidence=IDA] [GO:0045886 "negative regulation of
synaptic growth at neuromuscular junction" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0007507 EMBL:AE014296 GO:GO:0030155
GO:GO:0007498 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 GO:GO:0002121
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007476 GO:GO:0016321 GO:GO:0048854
Pfam:PF02210 GO:GO:0031987 GO:GO:0001964 GO:GO:0045995
GO:GO:0035011 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0035001 GO:GO:0005606 KO:K06240 EMBL:M96388 EMBL:L07288
EMBL:M75882 PIR:S28399 RefSeq:NP_476617.1 UniGene:Dm.865
ProteinModelPortal:Q00174 SMR:Q00174 MINT:MINT-754541 STRING:Q00174
PaxDb:Q00174 PRIDE:Q00174 GeneID:38723 KEGG:dme:Dmel_CG10236
CTD:38723 FlyBase:FBgn0002526 InParanoid:Q00174 OrthoDB:EOG4KKWHR
ChiTaRS:LanA GenomeRNAi:38723 NextBio:810058 Bgee:Q00174
GermOnline:CG10236 Uniprot:Q00174
Length = 3712
Score = 213 (80.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 57/156 (36%), Positives = 71/156 (45%)
Query: 43 CKGPPDYS---CQ-CELGWT-------GVDCSVNCLCNNHS-TCVHGIGICDECHDWTTG 90
C PP YS C+ C G+ G C + C CN HS TC GIC +C T G
Sbjct: 1776 CSCPPGYSGHSCEDCAPGYYRDPSGPYGGYC-IPCECNGHSETCDCATGICSKCQHGTEG 1834
Query: 91 DHCQYCRAGSYGNAT--TQEGCRKCDCNS--HGNSVLGVCD-SITGE---CICQDNTQGK 142
DHC+ C +G YGNAT T C C C N+ C+ S +G+ C C+ G
Sbjct: 1835 DHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQIHCECKPGYTGP 1894
Query: 143 NCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQG 178
CE C G+YG+P G C G + P QG
Sbjct: 1895 RCESCANGFYGEPESIGQVCKPCECSGNIN-PEDQG 1929
Score = 183 (69.5 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 50/152 (32%), Positives = 69/152 (45%)
Query: 61 DCSVNCLCNN--HSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
+C +C C++ TC +G+C CH+ GD C C+ YG + GCR CDC +
Sbjct: 1966 NCQ-SCDCDDLGTQTCDPFVGVCT-CHENVIGDRCDRCKPDHYG-FESGVGCRACDCGAA 2022
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGT-CYY-QCMARGMLTGPGP 176
NS CD TG C C+ G+ C+RC ++ DG T C Q +RG P
Sbjct: 2023 SNSTQ--CDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNT 2080
Query: 177 ---QGLGSGLAER-----NAWEG-KDTPSREC 199
Q L + +R N W KD +EC
Sbjct: 2081 GKCQCLPGVIGDRCDACPNRWVLIKDEGCQEC 2112
Score = 181 (68.8 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 42/139 (30%), Positives = 56/139 (40%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
C G+ P C+ +CS N + +C G C C + T G C C
Sbjct: 1899 CANGFYGEPESIGQVCK----PCECSGNINPEDQGSCDTRTGECLRCLNNTFGAACNLCA 1954
Query: 98 AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTD 157
G YG+A + C+ CDC+ G CD G C C +N G C+RC P +YG +
Sbjct: 1955 PGFYGDAIKLKNCQSCDCDDLGTQT---CDPFVGVCTCHENVIGDRCDRCKPDHYGFESG 2011
Query: 158 GGTCYYQCMARGMLTGPGP 176
G C A T P
Sbjct: 2012 VGCRACDCGAASNSTQCDP 2030
Score = 180 (68.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 42/125 (33%), Positives = 62/125 (49%)
Query: 49 YSCQCELGWTGV-DCSVNCLCNNHSTCVHGIGICD-ECHDWTT--GDHCQYCRAGSYGNA 104
Y QC G+ G +C C CN + + + EC T GD+C+ C+ G Y N
Sbjct: 478 YCKQCAEGYYGFPECKA-CECNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHG-YFNY 535
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQ 164
T C CDC++ G +C+ +G+CIC++ G C++CLPG+Y P D C
Sbjct: 536 PT---CSYCDCDNQGTES-EICNKQSGQCICREGFGGPRCDQCLPGFYNYP-DCKPC--N 588
Query: 165 CMARG 169
C + G
Sbjct: 589 CSSTG 593
Score = 179 (68.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 56/174 (32%), Positives = 71/174 (40%)
Query: 5 FRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKG---PPDYSCQ-CELGWTGV 60
+R G + D S C Y F+ C + C+ PP SC C G+ G
Sbjct: 387 YRPKGKHWNETDVCSPCQCD--YFFSTGHCEEETGNCECRAAFQPP--SCDSCAYGYYGY 442
Query: 61 DCSVNCLCNNHST----CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
C CN + T C G C G +C+ C G YG C+ C+CN
Sbjct: 443 PNCRECECNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPE----CKACECN 498
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYY-QCMARG 169
G S+ C+ TGEC C N G NCERC GY+ PT C Y C +G
Sbjct: 499 KIG-SITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPT----CSYCDCDNQG 547
Score = 157 (60.3 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 45/125 (36%), Positives = 59/125 (47%)
Query: 38 CIYGYCKGPPDYSC-QCELGWTGV-DCS-VNCLCNNHS--TCVHGIGICDECHDWTTGDH 92
C G+ G P C QC G+ DC NC S TC G C+ C + G
Sbjct: 562 CREGF--GGP--RCDQCLPGFYNYPDCKPCNCSSTGSSAITC-DNTGKCN-CLNNFAGKQ 615
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCLPGY 151
C C AG Y + C C C+SHG+ GV C+S G+C+CQ N G+ C+ C G+
Sbjct: 616 CTLCTAGYY----SYPDCLPCHCDSHGSQ--GVSCNS-DGQCLCQPNFDGRQCDSCKEGF 668
Query: 152 YGDPT 156
Y P+
Sbjct: 669 YNFPS 673
Score = 156 (60.0 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 41/136 (30%), Positives = 57/136 (41%)
Query: 33 LCYNKCIYGYCK--GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTG 90
+C I C+ P Y +G C+ + N +S C G C EC G
Sbjct: 1437 MCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTC-ECRQNIEG 1495
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
C C G Y N C +C C+ G L VCD I G C C+ N G++C++C+ G
Sbjct: 1496 RACDVCSNG-YFNFPH---CEQCSCHKPGTE-LEVCDKIDGACFCKKNVVGRDCDQCVDG 1550
Query: 151 YYG----DPTDGGTCY 162
Y +P TC+
Sbjct: 1551 TYNLQESNPDGCTTCF 1566
Score = 149 (57.5 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 39/126 (30%), Positives = 58/126 (46%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
F+ C + C G+ P C C+ +D C S V G +C +C +
Sbjct: 656 FDGRQC-DSCKEGFYNFPSCEDCNCDPAGV-IDKFAGC----GSVPV-G-ELC-KCKERV 706
Query: 89 TGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQGKNCER 146
TG C C+ + N + EGC CDC + G S L C S +G+C C+ +TQG+ C+
Sbjct: 707 TGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQE 766
Query: 147 CLPGYY 152
C G +
Sbjct: 767 CRDGTF 772
Score = 140 (54.3 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 34/103 (33%), Positives = 49/103 (47%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NATTQEG 109
C C WT D +++ L TC G C C T G CQ CR G++ ++ + G
Sbjct: 732 CDC---WT--DGTISAL----DTCTSKSGQCP-CKPHTQGRRCQECRDGTFDLDSASLFG 781
Query: 110 CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ C C+ G S VCD I+G+C C G C + L ++
Sbjct: 782 CKDCSCDV-GGSWQSVCDKISGQCKCHPRITGLACTQPLTTHF 823
Score = 86 (35.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 28/85 (32%), Positives = 36/85 (42%)
Query: 296 YQIFSC-PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLT 350
Y C P KCP + C +C+CPP G C E+ PN H+ + C
Sbjct: 1413 YGFPDCKPCKCPNSAMCEPTTGECMCPPNVIGDLC-EKCAPNTYGFHQVIGCEECACNPM 1471
Query: 351 GVHITHGRTLHYQVDLIR--CTCRQ 373
G I +G + Q DL C CRQ
Sbjct: 1472 G--IANGNS---QCDLFNGTCECRQ 1491
Score = 51 (23.0 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 298 IFSCPD-KCPENRT----C--INNQCVCPPRRTGPDCQEEI 331
+F C D C + C I+ QC C PR TG C + +
Sbjct: 779 LFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPL 819
Score = 49 (22.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 316 CVCPPRRTGPDCQEEICPN 334
C C P TGP C E C N
Sbjct: 1885 CECKPGYTGPRC--ESCAN 1901
Score = 49 (22.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 292 FN-ATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
FN T C ++ E+ C + QC+C GP C ++ P F N+ C
Sbjct: 533 FNYPTCSYCDCDNQGTESEICNKQSGQCICREGFGGPRC-DQCLPG----FYNYPDC 584
Score = 49 (22.3 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 310 TCINN--QCVCPPRRTGPDCQE 329
TC + QC C P G CQE
Sbjct: 745 TCTSKSGQCPCKPHTQGRRCQE 766
Score = 47 (21.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 301 CPDKCPENRTCINN-QCVCPPRRTGPDCQEEICPNECHE-FLNHGTCD 346
C + +C ++ QC+C P G C + C E F N +C+
Sbjct: 634 CDSHGSQGVSCNSDGQCLCQPNFDGRQC------DSCKEGFYNFPSCE 675
Score = 45 (20.9 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 315 QCVCPPRRTGPDCQE 329
+C CPP +G C++
Sbjct: 1775 RCSCPPGYSGHSCED 1789
Score = 42 (19.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 13/53 (24%), Positives = 18/53 (33%)
Query: 326 DCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCT---CRQVY 375
DC +C H C +TG H++ + CT C Q Y
Sbjct: 2018 DCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGY 2070
Score = 42 (19.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 300 SCPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
SC E C I+ C C G DC +
Sbjct: 1515 SCHKPGTELEVCDKIDGACFCKKNVVGRDCDQ 1546
Score = 37 (18.1 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 312 INNQCVCPPRRTGPDCQE 329
+ C C R TG C E
Sbjct: 696 VGELCKCKERVTGRICNE 713
>UNIPROTKB|F1PPP5 [details] [associations]
symbol:NOTCH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0030154 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 GO:GO:0050793 GeneTree:ENSGT00700000104305
SUPFAM:SSF90193 InterPro:IPR022336 PRINTS:PR01985 OMA:VCMPGFT
EMBL:AAEX03011027 Ensembl:ENSCAFT00000017040 Uniprot:F1PPP5
Length = 2324
Score = 202 (76.2 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 95/337 (28%), Positives = 131/337 (38%)
Query: 38 CIYGYCKGPPD-YSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGDHC 93
CI+G C G P Y C C+ GW G++C V+ CL N C +G G CD G C
Sbjct: 984 CIHGNCTGGPSGYKCLCDAGWIGINCEVDKNECLSN---PCQNG-GTCDNL---VNGYRC 1036
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGY 151
C+ G G Q +C N N G C D+I+G C C GKNC+ L
Sbjct: 1037 T-CKKGFKGY-NCQVNIDECASNPCLNQ--GTCFDNISGYTCHCVLPYTGKNCQTVLAPC 1092
Query: 152 YGDPTDGGTCYYQCM---ARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECL--WIIGQS 206
+P + + + L PG QG +R + + S+ C+ + +
Sbjct: 1093 SPNPCENAAVCKEAPDFESYTCLCAPGWQG------QRCTIDIDECVSKPCMNHGLCHNT 1146
Query: 207 LDSNST-APADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFC 261
S P + + DI+ PC +N DG+ F H +G C
Sbjct: 1147 QGSYMCECPPGFSGMDCEDDIDDCLANPC-QNGGSCVDGVNTFSCLC---HPGF-IGDKC 1201
Query: 262 TEDMHRGYEVLEAKSGVMTIHYKQG---KPSEGFNATY---QIFSCPDK-CPENRTCINN 314
DM+ K+G Y K GF+ + I C + C TC++
Sbjct: 1202 QTDMNECLSE-PCKNGGTCSDYVNSYTCKCQAGFDGVHCENNIDECTESSCFNGGTCVDG 1260
Query: 315 ----QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
C+CP TGP C EI NEC H LN G C
Sbjct: 1261 INSFSCLCPLGFTGPFCLHEI--NECNSHPCLNEGIC 1295
Score = 151 (58.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 86/326 (26%), Positives = 117/326 (35%)
Query: 41 GYCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAG 99
G C P Y CQC G+TG C + S CV+G G C + D+T C C G
Sbjct: 451 GTCLNLPGSYQCQCPQGFTGKHCDSPYVPCAPSPCVNG-GTCRQTGDFTF--ECN-CLPG 506
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCERCLPGYYGDPT- 156
G T + DC +H GVC D + T C C G+ C + P
Sbjct: 507 FEG-ITCERNID--DCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNA 563
Query: 157 --DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAP 214
+GGTC + G + G G + TP C+ +
Sbjct: 564 CQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGK 623
Query: 215 ADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTED-----MHRGY 269
A ++ I+ PC++ A + D P + Q G CTED M
Sbjct: 624 AGLLCHLDDACISNPCHKGA--LCDTNPLNGQYICTCPQGFK-GADCTEDVDECAMANSN 680
Query: 270 EVLEAKSGVMT---IHYKQGKPSEGFNATYQIFSC-PDKCPENRTCINN----QCVCPPR 321
A V T H + K G I C D C + TC++ C+C P
Sbjct: 681 PCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPG 740
Query: 322 RTGPDCQEEICPNECHE--FLNHGTC 345
G C+ EI NEC +N+G C
Sbjct: 741 FKGVHCELEI--NECQSNPCVNNGQC 764
Score = 148 (57.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 88/351 (25%), Positives = 129/351 (36%)
Query: 34 CYNK-CI-YGYCKGPP-DYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGICD-E 83
C +K C+ +G C Y C+C G++G+DC + CL C N +CV G+
Sbjct: 1132 CVSKPCMNHGLCHNTQGSYMCECPPGFSGMDCEDDIDDCLANPCQNGGSCVDGVNTFSCL 1191
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCD-CNSHGNSVLGVCDSITGECICQDNTQGK 142
CH GD CQ + N E C+ C+ + NS C + C++N
Sbjct: 1192 CHPGFIGDKCQ-----TDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNIDEC 1246
Query: 143 NCERCLPGYYGDPTDGGTCYYQCMARGMLTGP------GPQGLGSGLAERNAWEGKDTPS 196
C G G DG + C+ TGP L E +G T
Sbjct: 1247 TESSCFNG--GTCVDGINSF-SCLCPLGFTGPFCLHEINECNSHPCLNEGICVDGLGTYR 1303
Query: 197 REC-LWIIGQS------LDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVG 249
C L G++ L S S ++ + + C Y +P+ V
Sbjct: 1304 CTCPLGYTGKNCQTLVNLCSRSPCKNKGTCIQEKAESRCLCPSGWAGAYCDVPNVSCEVA 1363
Query: 250 GTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATY---QIFSCPDK-C 305
H+ + C H G + S H+ Q P G+ +Y Q+ C C
Sbjct: 1364 ALHRGVSTDHLC---QHSGICINAGNS-----HHCQC-PL-GYTGSYCEEQLDECSSNPC 1413
Query: 306 PENRTC---INN-QCVCPPRRTGPDCQEEI--CPNE-CHEFLNHGTC-DLL 348
TC I +C C P G +C+ E+ C N+ C N GTC DL+
Sbjct: 1414 QHGATCRDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQ---NGGTCVDLV 1461
Score = 146 (56.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 91/371 (24%), Positives = 139/371 (37%)
Query: 34 CYNKCIYGYCKGPPD---YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTT 89
C N + CK PD Y+C C GW G C+++ C + HG+ CH+ T
Sbjct: 1097 CENAAV---CKEAPDFESYTCLCAPGWQGQRCTIDIDECVSKPCMNHGL-----CHN-TQ 1147
Query: 90 GDHCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
G + C G G + C C + G+ V GV T C+C G C+
Sbjct: 1148 GSYMCECPPGFSGMDCEDDIDDCLANPCQNGGSCVDGVN---TFSCLCHPGFIGDKCQTD 1204
Query: 148 LPGYYGDPT-DGGTC--Y---YQCMARGMLTGPGPQGLGSGLAERNAWEG----KDTPSR 197
+ +P +GGTC Y Y C + G + E + + G S
Sbjct: 1205 MNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNIDECTESSCFNGGTCVDGINSF 1264
Query: 198 ECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDF--VTSVGGTHQST 255
CL +G T P L + + PC + + DGL + +G T ++
Sbjct: 1265 SCLCPLG------FTGP--FCLHEINECNSHPCLNEGICV-DGLGTYRCTCPLGYTGKNC 1315
Query: 256 -TLGVFCTED--MHRGYEVLE-AKSGVMTIHYKQGKPSEGFNATYQI------FSCPDKC 305
TL C+ ++G + E A+S + G + N + ++ S C
Sbjct: 1316 QTLVNLCSRSPCKNKGTCIQEKAESRCLCPSGWAGAYCDVPNVSCEVAALHRGVSTDHLC 1375
Query: 306 PENRTCIN----NQCVCPPRRTGPDCQEEICPNECHEF-LNHG-TCDLLLTGVHIT---- 355
+ CIN + C CP TG C+E++ +EC HG TC + G
Sbjct: 1376 QHSGICINAGNSHHCQCPLGYTGSYCEEQL--DECSSNPCQHGATCRDFIGGYRCECVPG 1433
Query: 356 -HGRTLHYQVD 365
G Y+VD
Sbjct: 1434 YQGVNCEYEVD 1444
Score = 133 (51.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 45/150 (30%), Positives = 56/150 (37%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KCI P Y CQC G+TGV C N + C HG +C D
Sbjct: 796 CLNGAKCI----DHPNGYECQCATGFTGVLCEENIDNCDPDPCHHG-----QCQDGIDSY 846
Query: 92 HCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCL 148
C C G G + + C C + G + D + G +C CQ T G NCE
Sbjct: 847 TC-ICNPGYMGAICSDQIDECYSSPCLNDGRCI----DLVNGYQCNCQPGTSGVNCEINF 901
Query: 149 PGYYGDPTDGGTCY-----YQCMARGMLTG 173
+P G C Y C+ TG
Sbjct: 902 DDCASNPCVHGVCMDGINRYSCVCSPGFTG 931
Score = 119 (46.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 43/150 (28%), Positives = 62/150 (41%)
Query: 21 CTVLLLY--IFNASLCYNKCIYGYC-KGPPDYSCQCELGWTGVDCSVNC-LCNNHSTCVH 76
C V L+ + LC + G C + CQC LG+TG C C+++ C H
Sbjct: 1360 CEVAALHRGVSTDHLCQHS---GICINAGNSHHCQCPLGYTGSYCEEQLDECSSNP-CQH 1415
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYG-NATTQ-EGCRKCDCNSHGNSVLGVCDSITG-EC 133
G C D+ G C+ C G G N + + C+ C + G V D + +C
Sbjct: 1416 GA----TCRDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCV----DLVNHFKC 1466
Query: 134 ICQDNTQGKNCERCLPGYYGDP--TDGGTC 161
C T+G CE + G P +GG C
Sbjct: 1467 SCPPGTRGLLCEENIDDCVGGPHCLNGGQC 1496
Score = 86 (35.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCIN--N--QCVCPPRRTGPDCQEEI--CPNECHEFLNH 342
+G N Y++ C ++ C TC++ N +C CPP G C+E I C H LN
Sbjct: 1435 QGVNCEYEVDECQNQPCQNGGTCVDLVNHFKCSCPPGTRGLLCEENIDDCVGGPH-CLNG 1493
Query: 343 GTC 345
G C
Sbjct: 1494 GQC 1496
Score = 57 (25.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 316 CVCPPRRTGPDCQE--EICPN-ECHEFLNHGTC 345
CVC TG C+ ++CP C LN GTC
Sbjct: 1545 CVCRSAFTGRHCETFIDVCPQMPC---LNGGTC 1574
Score = 47 (21.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 301 CPDK-CPENRTCI--NNQ-----CVCPPRRTGPDCQEEICPNEC 336
CP C TC +N C CPP +G CQ +C
Sbjct: 1563 CPQMPCLNGGTCAVASNMPDGFICRCPPGFSGAKCQSSCGQVKC 1606
>FB|FBgn0002528 [details] [associations]
symbol:LanB2 "Laminin B2" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] EMBL:AE014296
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 OMA:DRCKENK KO:K05635 EMBL:M58417
EMBL:M25063 EMBL:BT021394 PIR:A31483 RefSeq:NP_524006.1
UniGene:Dm.2551 ProteinModelPortal:P15215 SMR:P15215 DIP:DIP-21994N
IntAct:P15215 MINT:MINT-810240 STRING:P15215 PaxDb:P15215
PRIDE:P15215 EnsemblMetazoa:FBtr0076382 GeneID:39118
KEGG:dme:Dmel_CG3322 CTD:39118 FlyBase:FBgn0002528
HOGENOM:HOG000264193 InParanoid:P15215 OrthoDB:EOG434TMX
PhylomeDB:P15215 GenomeRNAi:39118 NextBio:812009 Bgee:P15215
GermOnline:CG3322 Uniprot:P15215
Length = 1639
Score = 204 (76.9 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 42/110 (38%), Positives = 59/110 (53%)
Query: 55 LGWTGVDCSVNCLCNNHSTCVH---GIGICDECHDWTTGDHCQYCRAGSYGNATTQEG-- 109
LG T DC C C N C+ IC EC G C+ C G +G+ T G
Sbjct: 783 LGGTPNDCK-RCPCPNDGACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEV 841
Query: 110 --CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
C+ CDCN + + + +G C+ TGEC+ C NT G++C++CL G++GDP
Sbjct: 842 QTCKSCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHCDQCLSGHFGDP 891
Score = 172 (65.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 41/126 (32%), Positives = 60/126 (47%)
Query: 39 IYGYCKGPPDY---SC-QCELGW----TGVDCSVNCLCNN----HSTCVHGIGICDECHD 86
+ G C+ P+ C +C+ G+ +G C NCLC+ +STC G C C
Sbjct: 922 VTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCE-NCLCDPVGSYNSTCDRYSGQC-HCRP 979
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
G C C YG ++ EGC+ C+C+ G+ CD G+C C DN +G+ C+R
Sbjct: 980 GVMGQRCDQCENYFYGFSS--EGCKPCECDESGSKGFQ-CDQ-NGQCPCNDNVEGRRCDR 1035
Query: 147 CLPGYY 152
C Y
Sbjct: 1036 CKENKY 1041
Score = 169 (64.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 34/105 (32%), Positives = 49/105 (46%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGN--ATTQEGCRKCDCNSH 118
DC+ N N C G C +C T G+HC C +G +G+ A C +C C
Sbjct: 848 DCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEA 907
Query: 119 GNSV----LGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
G + CD +TG+C C+ N G++C C PGY+ + G
Sbjct: 908 GTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNG 952
Score = 168 (64.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C + G C+ C G Y ++ + G C CDC+ H + +CDS TG CICQ NT
Sbjct: 712 CPEGYLGQFCESCAPG-YRHSPARGGPFMPCIPCDCHGHAD----ICDSETGRCICQHNT 766
Query: 140 QGKNCERCLPGYYGDPTDGGT 160
G NC++C G+YG+ GGT
Sbjct: 767 HGDNCDQCAKGFYGNAL-GGT 786
Score = 168 (64.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 44/146 (30%), Positives = 65/146 (44%)
Query: 64 VNCLCN---NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN 120
VNC C+ + S + G C +C TGD C C Y GC++C C+S G+
Sbjct: 412 VNCACDPVGSRSLQCNSHGKC-QCKPGVTGDKCDRCDNNYYQFGP--HGCQQCGCDSGGS 468
Query: 121 SV-LGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTD--GGT-CYYQCMARGMLTGPG 175
CD+ TG C C++N +G+ C C PG++ D + G T C+ +T PG
Sbjct: 469 HQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRFGCTPCFCYGHTSECMTAPG 528
Query: 176 PQ--GLGSGLAE-RNAWEGKDTPSRE 198
+ S + + W D RE
Sbjct: 529 YSIVSVTSNFNKFKERWTAADLNQRE 554
Score = 159 (61.0 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 40/120 (33%), Positives = 56/120 (46%)
Query: 42 YCKG-PPDYSCQCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAG 99
+C+ P Y G + C + C C+ H+ C G C C T GD+C C G
Sbjct: 720 FCESCAPGYRHSPARGGPFMPC-IPCDCHGHADICDSETGRCI-CQHNTHGDNCDQCAKG 777
Query: 100 SYGNAT--TQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPT 156
YGNA T C++C C + G + L + + T C C G CE+C G++GDPT
Sbjct: 778 FYGNALGGTPNDCKRCPCPNDG-ACLQINED-TVICTECPKGYFGSRCEQCSDGFFGDPT 835
Score = 133 (51.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 34/127 (26%), Positives = 55/127 (43%)
Query: 36 NKCIYGYCKGP---PDYSC-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
++C+ G+ P P C +C G + + + C G C +C G
Sbjct: 881 DQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSI----TRCDQVTGQC-QCKPNVIGR 935
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
C C+ G Y N + GC C C+ G S CD +G+C C+ G+ C++C +
Sbjct: 936 DCGECQPG-YFNIRSGNGCENCLCDPVG-SYNSTCDRYSGQCHCRPGVMGQRCDQCENYF 993
Query: 152 YGDPTDG 158
YG ++G
Sbjct: 994 YGFSSEG 1000
Score = 51 (23.0 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 308 NRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHG 343
N TC + QC C P G C + C N + F + G
Sbjct: 965 NSTCDRYSGQCHCRPGVMGQRCDQ--CENYFYGFSSEG 1000
Score = 48 (22.0 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 312 INNQCVCPPRRTGPDCQE 329
+ QC C P G DC E
Sbjct: 922 VTGQCQCKPNVIGRDCGE 939
Score = 40 (19.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 9/23 (39%), Positives = 9/23 (39%)
Query: 315 QCVCPPRRTGPDCQEEICPNECH 337
QC CP G C E P H
Sbjct: 709 QCTCPEGYLGQFC-ESCAPGYRH 730
>UNIPROTKB|F1PS94 [details] [associations]
symbol:NOTCH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
GO:GO:0016021 GO:GO:0007275 GO:GO:0030154 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985 EMBL:AAEX03011027
Ensembl:ENSCAFT00000016889 Uniprot:F1PS94
Length = 2471
Score = 202 (76.2 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 95/337 (28%), Positives = 131/337 (38%)
Query: 38 CIYGYCKGPPD-YSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGDHC 93
CI+G C G P Y C C+ GW G++C V+ CL N C +G G CD G C
Sbjct: 729 CIHGNCTGGPSGYKCLCDAGWIGINCEVDKNECLSN---PCQNG-GTCDNL---VNGYRC 781
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGY 151
C+ G G Q +C N N G C D+I+G C C GKNC+ L
Sbjct: 782 T-CKKGFKGY-NCQVNIDECASNPCLNQ--GTCFDNISGYTCHCVLPYTGKNCQTVLAPC 837
Query: 152 YGDPTDGGTCYYQCM---ARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECL--WIIGQS 206
+P + + + L PG QG +R + + S+ C+ + +
Sbjct: 838 SPNPCENAAVCKEAPDFESYTCLCAPGWQG------QRCTIDIDECVSKPCMNHGLCHNT 891
Query: 207 LDSNST-APADIILLRLQPDINV----PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFC 261
S P + + DI+ PC +N DG+ F H +G C
Sbjct: 892 QGSYMCECPPGFSGMDCEDDIDDCLANPC-QNGGSCVDGVNTFSCLC---HPGF-IGDKC 946
Query: 262 TEDMHRGYEVLEAKSGVMTIHYKQG---KPSEGFNATY---QIFSCPDK-CPENRTCINN 314
DM+ K+G Y K GF+ + I C + C TC++
Sbjct: 947 QTDMNECLSE-PCKNGGTCSDYVNSYTCKCQAGFDGVHCENNIDECTESSCFNGGTCVDG 1005
Query: 315 ----QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
C+CP TGP C EI NEC H LN G C
Sbjct: 1006 INSFSCLCPLGFTGPFCLHEI--NECNSHPCLNEGIC 1040
Score = 151 (58.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 86/326 (26%), Positives = 117/326 (35%)
Query: 41 GYCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAG 99
G C P Y CQC G+TG C + S CV+G G C + D+T C C G
Sbjct: 196 GTCLNLPGSYQCQCPQGFTGKHCDSPYVPCAPSPCVNG-GTCRQTGDFTF--ECN-CLPG 251
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCERCLPGYYGDPT- 156
G T + DC +H GVC D + T C C G+ C + P
Sbjct: 252 FEG-ITCERNID--DCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNA 308
Query: 157 --DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAP 214
+GGTC + G + G G + TP C+ +
Sbjct: 309 CQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGK 368
Query: 215 ADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTED-----MHRGY 269
A ++ I+ PC++ A + D P + Q G CTED M
Sbjct: 369 AGLLCHLDDACISNPCHKGA--LCDTNPLNGQYICTCPQGFK-GADCTEDVDECAMANSN 425
Query: 270 EVLEAKSGVMT---IHYKQGKPSEGFNATYQIFSC-PDKCPENRTCINN----QCVCPPR 321
A V T H + K G I C D C + TC++ C+C P
Sbjct: 426 PCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPG 485
Query: 322 RTGPDCQEEICPNECHE--FLNHGTC 345
G C+ EI NEC +N+G C
Sbjct: 486 FKGVHCELEI--NECQSNPCVNNGQC 509
Score = 148 (57.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 88/351 (25%), Positives = 129/351 (36%)
Query: 34 CYNK-CI-YGYCKGPP-DYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGICD-E 83
C +K C+ +G C Y C+C G++G+DC + CL C N +CV G+
Sbjct: 877 CVSKPCMNHGLCHNTQGSYMCECPPGFSGMDCEDDIDDCLANPCQNGGSCVDGVNTFSCL 936
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCD-CNSHGNSVLGVCDSITGECICQDNTQGK 142
CH GD CQ + N E C+ C+ + NS C + C++N
Sbjct: 937 CHPGFIGDKCQ-----TDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNIDEC 991
Query: 143 NCERCLPGYYGDPTDGGTCYYQCMARGMLTGP------GPQGLGSGLAERNAWEGKDTPS 196
C G G DG + C+ TGP L E +G T
Sbjct: 992 TESSCFNG--GTCVDGINSF-SCLCPLGFTGPFCLHEINECNSHPCLNEGICVDGLGTYR 1048
Query: 197 REC-LWIIGQS------LDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVG 249
C L G++ L S S ++ + + C Y +P+ V
Sbjct: 1049 CTCPLGYTGKNCQTLVNLCSRSPCKNKGTCIQEKAESRCLCPSGWAGAYCDVPNVSCEVA 1108
Query: 250 GTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATY---QIFSCPDK-C 305
H+ + C H G + S H+ Q P G+ +Y Q+ C C
Sbjct: 1109 ALHRGVSTDHLC---QHSGICINAGNS-----HHCQC-PL-GYTGSYCEEQLDECSSNPC 1158
Query: 306 PENRTC---INN-QCVCPPRRTGPDCQEEI--CPNE-CHEFLNHGTC-DLL 348
TC I +C C P G +C+ E+ C N+ C N GTC DL+
Sbjct: 1159 QHGATCRDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQ---NGGTCVDLV 1206
Score = 146 (56.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 91/371 (24%), Positives = 139/371 (37%)
Query: 34 CYNKCIYGYCKGPPD---YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTT 89
C N + CK PD Y+C C GW G C+++ C + HG+ CH+ T
Sbjct: 842 CENAAV---CKEAPDFESYTCLCAPGWQGQRCTIDIDECVSKPCMNHGL-----CHN-TQ 892
Query: 90 GDHCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
G + C G G + C C + G+ V GV T C+C G C+
Sbjct: 893 GSYMCECPPGFSGMDCEDDIDDCLANPCQNGGSCVDGVN---TFSCLCHPGFIGDKCQTD 949
Query: 148 LPGYYGDPT-DGGTC--Y---YQCMARGMLTGPGPQGLGSGLAERNAWEG----KDTPSR 197
+ +P +GGTC Y Y C + G + E + + G S
Sbjct: 950 MNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNIDECTESSCFNGGTCVDGINSF 1009
Query: 198 ECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDF--VTSVGGTHQST 255
CL +G T P L + + PC + + DGL + +G T ++
Sbjct: 1010 SCLCPLG------FTGP--FCLHEINECNSHPCLNEGICV-DGLGTYRCTCPLGYTGKNC 1060
Query: 256 -TLGVFCTED--MHRGYEVLE-AKSGVMTIHYKQGKPSEGFNATYQI------FSCPDKC 305
TL C+ ++G + E A+S + G + N + ++ S C
Sbjct: 1061 QTLVNLCSRSPCKNKGTCIQEKAESRCLCPSGWAGAYCDVPNVSCEVAALHRGVSTDHLC 1120
Query: 306 PENRTCIN----NQCVCPPRRTGPDCQEEICPNECHEF-LNHG-TCDLLLTGVHIT---- 355
+ CIN + C CP TG C+E++ +EC HG TC + G
Sbjct: 1121 QHSGICINAGNSHHCQCPLGYTGSYCEEQL--DECSSNPCQHGATCRDFIGGYRCECVPG 1178
Query: 356 -HGRTLHYQVD 365
G Y+VD
Sbjct: 1179 YQGVNCEYEVD 1189
Score = 133 (51.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 45/150 (30%), Positives = 56/150 (37%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KCI P Y CQC G+TGV C N + C HG +C D
Sbjct: 541 CLNGAKCI----DHPNGYECQCATGFTGVLCEENIDNCDPDPCHHG-----QCQDGIDSY 591
Query: 92 HCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCL 148
C C G G + + C C + G + D + G +C CQ T G NCE
Sbjct: 592 TC-ICNPGYMGAICSDQIDECYSSPCLNDGRCI----DLVNGYQCNCQPGTSGVNCEINF 646
Query: 149 PGYYGDPTDGGTCY-----YQCMARGMLTG 173
+P G C Y C+ TG
Sbjct: 647 DDCASNPCVHGVCMDGINRYSCVCSPGFTG 676
Score = 119 (46.9 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 43/150 (28%), Positives = 62/150 (41%)
Query: 21 CTVLLLY--IFNASLCYNKCIYGYC-KGPPDYSCQCELGWTGVDCSVNC-LCNNHSTCVH 76
C V L+ + LC + G C + CQC LG+TG C C+++ C H
Sbjct: 1105 CEVAALHRGVSTDHLCQHS---GICINAGNSHHCQCPLGYTGSYCEEQLDECSSNP-CQH 1160
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYG-NATTQ-EGCRKCDCNSHGNSVLGVCDSITG-EC 133
G C D+ G C+ C G G N + + C+ C + G V D + +C
Sbjct: 1161 GA----TCRDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCV----DLVNHFKC 1211
Query: 134 ICQDNTQGKNCERCLPGYYGDP--TDGGTC 161
C T+G CE + G P +GG C
Sbjct: 1212 SCPPGTRGLLCEENIDDCVGGPHCLNGGQC 1241
Score = 86 (35.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCIN--N--QCVCPPRRTGPDCQEEI--CPNECHEFLNH 342
+G N Y++ C ++ C TC++ N +C CPP G C+E I C H LN
Sbjct: 1180 QGVNCEYEVDECQNQPCQNGGTCVDLVNHFKCSCPPGTRGLLCEENIDDCVGGPH-CLNG 1238
Query: 343 GTC 345
G C
Sbjct: 1239 GQC 1241
Score = 57 (25.1 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 316 CVCPPRRTGPDCQE--EICPN-ECHEFLNHGTC 345
CVC TG C+ ++CP C LN GTC
Sbjct: 1290 CVCRSAFTGRHCETFIDVCPQMPC---LNGGTC 1319
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 301 CPDK-CPENRTCI--NNQ-----CVCPPRRTGPDCQEEICPNEC 336
CP C TC +N C CPP +G CQ +C
Sbjct: 1308 CPQMPCLNGGTCAVASNMPDGFICRCPPGFSGAKCQSSCGQVKC 1351
>UNIPROTKB|Q96KG7 [details] [associations]
symbol:MEGF10 "Multiple epidermal growth factor-like
domains protein 10" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0048641
"regulation of skeletal muscle tissue development" evidence=IMP]
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IDA] [GO:0051147 "regulation of muscle
cell differentiation" evidence=IMP] [GO:0014816 "satellite cell
differentiation" evidence=IMP] [GO:0055001 "muscle cell
development" evidence=IMP] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
EMBL:CH471062 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 HSSP:P01132 GO:GO:0051147 EMBL:AB058676
EMBL:CR749437 EMBL:BC020198 EMBL:BC152478 IPI:IPI00064607
IPI:IPI00873983 RefSeq:NP_001243474.1 RefSeq:NP_115822.1
UniGene:Hs.438709 ProteinModelPortal:Q96KG7 SMR:Q96KG7
IntAct:Q96KG7 STRING:Q96KG7 PhosphoSite:Q96KG7 DMDM:74716908
PaxDb:Q96KG7 PRIDE:Q96KG7 Ensembl:ENST00000274473
Ensembl:ENST00000418761 Ensembl:ENST00000503335
Ensembl:ENST00000508365 GeneID:84466 KEGG:hsa:84466 UCSC:uc003kuh.4
UCSC:uc010jdc.1 CTD:84466 GeneCards:GC05P126654 HGNC:HGNC:29634
HPA:HPA026876 MIM:612453 MIM:614399 neXtProt:NX_Q96KG7
Orphanet:98920 PharmGKB:PA144596410 HOVERGEN:HBG108333
InParanoid:Q96KG7 OMA:FGCNLTC PhylomeDB:Q96KG7 GenomeRNAi:84466
NextBio:74274 Bgee:Q96KG7 CleanEx:HS_MEGF10 Genevestigator:Q96KG7
GO:GO:0014719 GO:GO:0014841 Uniprot:Q96KG7
Length = 1140
Score = 182 (69.1 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 62/199 (31%), Positives = 85/199 (42%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGIGICDE--- 83
C +KC++G C P +CQCE GW G +CS C C + C +G +C+
Sbjct: 109 CADKCVHGRCIAPN--TCQCEPGWGGTNCSSACDGDHWGPHCTSRCQCKNG-ALCNPITG 165
Query: 84 -CHDWT--TGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CH G C+ C G+YGN Q +C C + G CD +TGEC C
Sbjct: 166 ACHCAAGFRGWRCEDRCEQGTYGNDCHQ----RCQCQN-G----ATCDHVTGECRCPPGY 216
Query: 140 QGKNCER-CLPGYYGDPTD-------GGTCYYQCMARGMLTGP-GPQGLGSGLAERNAWE 190
G CE C PG +G + GG C++ G + P G G G
Sbjct: 217 TGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHH---VTGECSCPSGWMGTVCGQPCPEGRF 273
Query: 191 GKDTPSRECLWIIGQSLDS 209
GK+ S+EC G + D+
Sbjct: 274 GKNC-SQECQCHNGGTCDA 291
Score = 182 (69.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 48/124 (38%), Positives = 63/124 (50%)
Query: 34 CYNK--C-IY-GYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C+N C Y G CK P ++ C +C LG+ G DC++ C C N + C H G C C
Sbjct: 718 CHNGAFCSAYDGECKCTPGWTGLYCTQRCPLGFYGKDCALICQCQNGADCDHISGQCT-C 776
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G HC Q C +G+YG GCR+ CDC + NS CD ITG C C +G
Sbjct: 777 RTGFMGRHCEQKCPSGTYGY-----GCRQICDCLN--NST---CDHITGTCYCSPGWKGA 826
Query: 143 NCER 146
C++
Sbjct: 827 RCDQ 830
Score = 165 (63.1 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 51/146 (34%), Positives = 63/146 (43%)
Query: 30 NASLCYNKCIYGYCK---GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC N I G C G + C+ CE G G DC C C N +TC H G C C
Sbjct: 156 NGALC-NP-ITGACHCAAGFRGWRCEDRCEQGTYGNDCHQRCQCQNGATCDHVTGEC-RC 212
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG C+ C G +G Q +C C + G GVC +TGEC C G
Sbjct: 213 PPGYTGAFCEDLCPPGKHGPQCEQ----RCPCQN-G----GVCHHVTGECSCPSGWMGTV 263
Query: 144 C-ERCLPGYYGDPT-------DGGTC 161
C + C G +G +GGTC
Sbjct: 264 CGQPCPEGRFGKNCSQECQCHNGGTC 289
Score = 162 (62.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 40/122 (32%), Positives = 53/122 (43%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
G C P Y+ CQ C +G GV C+ C C N C H G C C G+ C+
Sbjct: 294 GQCHCSPGYTGERCQDECPVGTYGVLCAETCQCVNGGKCYHVSGAC-LCEAGFAGERCEA 352
Query: 95 -YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYY 152
C G YG ++C C+ C ++GEC C+ G C E C PG+Y
Sbjct: 353 RLCPEGLYGIKCD----KRCPCHLENTHS---CHPMSGECACKPGWSGLYCNETCSPGFY 405
Query: 153 GD 154
G+
Sbjct: 406 GE 407
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 46/129 (35%), Positives = 60/129 (46%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSV---------NCL----CNNHSTCVHGIGICDECHDW 87
G C P D SCQC GW G DCS NC+ C+N + C G C +C
Sbjct: 679 GTCN-PIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGEC-KCTPG 736
Query: 88 TTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
TG +C Q C G YG + C C C + + CD I+G+C C+ G++CE
Sbjct: 737 WTGLYCTQRCPLGFYG-----KDCALICQCQNGAD-----CDHISGQCTCRTGFMGRHCE 786
Query: 146 -RCLPGYYG 153
+C G YG
Sbjct: 787 QKCPSGTYG 795
Score = 157 (60.3 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 42/136 (30%), Positives = 58/136 (42%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +C++ + G C P + C C G G +CS C C+N TC G C C
Sbjct: 242 NGGVCHH--VTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATGQC-HC 298
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG+ CQ C G+YG + C C + G C ++G C+C+ G+
Sbjct: 299 SPGYTGERCQDECPVGTYGVLCAET----CQCVNGGK-----CYHVSGACLCEAGFAGER 349
Query: 144 CER--CLPGYYGDPTD 157
CE C G YG D
Sbjct: 350 CEARLCPEGLYGIKCD 365
Score = 153 (58.9 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 46/129 (35%), Positives = 58/129 (44%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
G+C+ P +S C C G G +CS+ C C N ++C GIC EC G CQ
Sbjct: 555 GHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGIC-ECAPGFRGTTCQR 613
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYG 153
C G YG+ +Q C +C H + G C ITG C C G C E C G +G
Sbjct: 614 ICSPGFYGHRCSQT-CPQC---VHSS---GPCHHITGLCDCLPGFTGALCNEVCPSGRFG 666
Query: 154 DPTDG-GTC 161
G TC
Sbjct: 667 KNCAGICTC 675
Score = 145 (56.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 41/119 (34%), Positives = 54/119 (45%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
C G+ KG D S C LG G++CS C C N + C G C C G C C
Sbjct: 430 CAPGF-KGI-DCSTPCPLGTYGINCSSRCGCKNDAVCSPVDGSCT-CKAGWHGVDCSIRC 486
Query: 97 RAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+G++G GC C C +G G C+++ G C C +G+ CE C G YG
Sbjct: 487 PSGTWGF-----GCNLTCQC-LNG----GACNTLDGTCTCAPGWRGEKCELPCQDGTYG 535
Score = 133 (51.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 42/136 (30%), Positives = 59/136 (43%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ---CELGWTGVDCSVNCLC---NNHSTCVHGIGI 80
N CY+ + G C ++ C+ C G G+ C C C N HS C G
Sbjct: 328 NGGKCYH--VSGACLCEAGFAGERCEARLCPEGLYGIKCDKRCPCHLENTHS-CHPMSGE 384
Query: 81 CDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDN 138
C C +G +C + C G YG E C++ C C + + CDS+TG+C C
Sbjct: 385 C-ACKPGWSGLYCNETCSPGFYG-----EACQQICSCQNGAD-----CDSVTGKCTCAPG 433
Query: 139 TQGKNCERCLP-GYYG 153
+G +C P G YG
Sbjct: 434 FKGIDCSTPCPLGTYG 449
Score = 130 (50.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 44/142 (30%), Positives = 57/142 (40%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTT 89
+C+ G D +C C GW G C + C C C H D CH TT
Sbjct: 500 QCLNGGACNTLDGTCTCAPGWRGEKCELPCQDGTYGLNCAERCDCSHA----DGCHP-TT 554
Query: 90 GDHCQYCRAGSYG---NATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCE 145
G HC+ C G G ++ EG +C+ G C G C C +G C+
Sbjct: 555 G-HCR-CLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 612
Query: 146 R-CLPGYYGDPTDGGTCYYQCM 166
R C PG+YG TC QC+
Sbjct: 613 RICSPGFYGHRCSQ-TCP-QCV 632
Score = 128 (50.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 48/149 (32%), Positives = 65/149 (43%)
Query: 30 NASL-CYNK----CIY--GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHST--CV 75
N SL CY K C G C+ P + +CQ C G+ G CS C HS+ C
Sbjct: 580 NCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCH 639
Query: 76 HGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGEC 133
H G+CD C TG C + C +G +G + C C C ++G C+ I C
Sbjct: 640 HITGLCD-CLPGFTGALCNEVCPSGRFG-----KNCAGICTCTNNGT-----CNPIDRSC 688
Query: 134 ICQDNTQGKNCER-CLPGYYGDPTDGGTC 161
C G +C + C P ++G P TC
Sbjct: 689 QCYPGWIGSDCSQPCPPAHWG-PNCIHTC 716
Score = 123 (48.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 28 IFNASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICD 82
+ ++ C++ I G C P ++ C C G G +C+ C C N+ TC + I
Sbjct: 632 VHSSGPCHH--ITGLCDCLPGFTGALCNEVCPSGRFGKNCAGICTCTNNGTC-NPIDRSC 688
Query: 83 ECHD-WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
+C+ W D Q C +G C CN H + C + GEC C G
Sbjct: 689 QCYPGWIGSDCSQPCPPAHWG-----PNCIHT-CNCHNGAF---CSAYDGECKCTPGWTG 739
Query: 142 KNC-ERCLPGYYG 153
C +RC G+YG
Sbjct: 740 LYCTQRCPLGFYG 752
Score = 119 (46.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 36/120 (30%), Positives = 47/120 (39%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ-YCRAGSYGNATTQE-G 109
+CE G G DC C C N +TC H G C C TG C+ C G +G Q
Sbjct: 181 RCEQGTYGNDCHQRCQCQNGATCDHVTGEC-RCPPGYTGAFCEDLCPPGKHGPQCEQRCP 239
Query: 110 CRKCDCNSH--GNSVL--GVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
C+ H G G ++ G+ C + GKNC + + G D T C
Sbjct: 240 CQNGGVCHHVTGECSCPSGWMGTVCGQP-CPEGRFGKNCSQECQCHNGGTCDAATGQCHC 298
Score = 71 (30.1 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 18/50 (36%), Positives = 22/50 (44%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTG 351
+C TC QC C P TG CQ+E CP + L TC + G
Sbjct: 282 QCHNGGTCDAATGQCHCSPGYTGERCQDE-CPVGTYGVLCAETCQCVNGG 330
Score = 60 (26.2 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNE-----CHEF---LNHGTCDLLLTG 351
+C C I+ QC C G C+++ CP+ C + LN+ TCD + TG
Sbjct: 760 QCQNGADCDHISGQCTCRTGFMGRHCEQK-CPSGTYGYGCRQICDCLNNSTCDHI-TG 815
Score = 60 (26.2 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 15/66 (22%), Positives = 24/66 (36%)
Query: 295 TYQIFSCPD--KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLT 350
TY + C + +C C ++ C+C G C+ +CP + C L
Sbjct: 315 TYGVL-CAETCQCVNGGKCYHVSGACLCEAGFAGERCEARLCPEGLYGIKCDKRCPCHLE 373
Query: 351 GVHITH 356
H H
Sbjct: 374 NTHSCH 379
Score = 58 (25.5 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 19/59 (32%), Positives = 24/59 (40%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCP--ENRTC--INNQCVCPPRRTGPDCQE 329
++G M H +Q PS TY + C C N TC I C C P G C +
Sbjct: 777 RTGFMGRHCEQKCPS----GTYG-YGCRQICDCLNNSTCDHITGTCYCSPGWKGARCDQ 830
Score = 57 (25.1 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 21/68 (30%), Positives = 27/68 (39%)
Query: 289 SEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEFL- 340
S GF +CP + C I C C P TG C E +CP+ C
Sbjct: 616 SPGFYGHRCSQTCPQCVHSSGPCHHITGLCDCLPGFTGALCNE-VCPSGRFGKNCAGICT 674
Query: 341 --NHGTCD 346
N+GTC+
Sbjct: 675 CTNNGTCN 682
Score = 55 (24.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 301 CPDKCP---EN-RTC--INNQCVCPPRRTGPDCQEEICP 333
C +CP EN +C ++ +C C P +G C E P
Sbjct: 364 CDKRCPCHLENTHSCHPMSGECACKPGWSGLYCNETCSP 402
Score = 55 (24.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 26/91 (28%), Positives = 37/91 (40%)
Query: 298 IFSCPDK--C-PENRTC------INNQCV--CPPRRTGPDCQEEI-CPNE--CHEFLNHG 343
I +C + C P +R+C I + C CPP GP+C C N C +
Sbjct: 672 ICTCTNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGEC 731
Query: 344 TCDLLLTGVHITHGRTL-HYQVDL-IRCTCR 372
C TG++ T L Y D + C C+
Sbjct: 732 KCTPGWTGLYCTQRCPLGFYGKDCALICQCQ 762
Score = 54 (24.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 289 SEGF--NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICP 333
S GF A QI SC + + + +C C P G DC CP
Sbjct: 401 SPGFYGEACQQICSCQNGA--DCDSVTGKCTCAPGFKGIDCSTP-CP 444
Score = 46 (21.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 300 SCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEIC 332
S P C +C + C C P G CQ IC
Sbjct: 582 SLPCYCKNGASCSPDDGICECAPGFRGTTCQR-IC 615
Score = 41 (19.5 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNECHEFLNHGTCD 346
+C + ++ VC R GP+C C N + G C+
Sbjct: 558 RCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICE 601
Score = 41 (19.5 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 15/57 (26%), Positives = 20/57 (35%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLL-LTGVHITHG 357
+C C ++ C C P G C E C + + CD G H T G
Sbjct: 500 QCLNGGACNTLDGTCTCAPGWRGEKC-ELPCQDGTYGLNCAERCDCSHADGCHPTTG 555
>UNIPROTKB|Q13751 [details] [associations]
symbol:LAMB3 "Laminin subunit beta-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 EMBL:CH471100 GO:GO:0005198
GO:GO:0050873 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_111155 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
GO:GO:0031581 MIM:226650 Orphanet:79402 EMBL:AL031316
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AL023754 MIM:226700 Orphanet:79404 GO:GO:0005610 EMBL:L25541
EMBL:U17760 EMBL:U17745 EMBL:U17746 EMBL:U17747 EMBL:U17748
EMBL:U17749 EMBL:U17750 EMBL:U17751 EMBL:U17752 EMBL:U17753
EMBL:U17754 EMBL:U17755 EMBL:U17756 EMBL:U17757 EMBL:U17758
EMBL:U17759 EMBL:D37766 EMBL:AY035783 EMBL:BC075838 IPI:IPI00299404
PIR:A53612 RefSeq:NP_000219.2 RefSeq:NP_001017402.1
RefSeq:NP_001121113.1 UniGene:Hs.497636 ProteinModelPortal:Q13751
SMR:Q13751 MINT:MINT-4053402 STRING:Q13751 PhosphoSite:Q13751
DMDM:2497600 PaxDb:Q13751 PRIDE:Q13751 DNASU:3914
Ensembl:ENST00000356082 Ensembl:ENST00000367030
Ensembl:ENST00000391911 Ensembl:ENST00000455193 GeneID:3914
KEGG:hsa:3914 UCSC:uc001hhg.3 CTD:3914 GeneCards:GC01M209788
HGNC:HGNC:6490 HPA:HPA008069 MIM:150310 neXtProt:NX_Q13751
PharmGKB:PA30278 eggNOG:NOG289025 HOGENOM:HOG000113279
HOVERGEN:HBG052302 InParanoid:Q13751 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z PhylomeDB:Q13751 ChiTaRS:LAMB3 GenomeRNAi:3914
NextBio:15375 PMAP-CutDB:Q13751 ArrayExpress:Q13751 Bgee:Q13751
CleanEx:HS_LAMB3 Genevestigator:Q13751 GermOnline:ENSG00000196878
Uniprot:Q13751
Length = 1172
Score = 201 (75.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 41/125 (32%), Positives = 65/125 (52%)
Query: 35 YNKCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
YN + +G + CQ C+ C + S +G G+CD C D T G +C
Sbjct: 297 YNNRPWRPAEGQDAHECQRCDCNGHSETCHFDPAVFAASQGAYG-GVCDNCRDHTEGKNC 355
Query: 94 QYCRAGSYGN----ATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCL 148
+ C+ + N A+ QE C C+C+ G +V G CD +TG+C+C+++ QG+ C+ C
Sbjct: 356 ERCQLHYFRNRRPGASIQETCISCECDPDG-AVPGAPCDPVTGQCVCKEHVQGERCDLCK 414
Query: 149 PGYYG 153
PG+ G
Sbjct: 415 PGFTG 419
Score = 148 (57.2 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 48/161 (29%), Positives = 66/161 (40%)
Query: 8 SGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDY---SC-QCE-LGW---TG 59
+GLT A RC +L C + G C P+ C QC W +G
Sbjct: 418 TGLTYANPQGCHRCDCNILGSRRDMPCDEES--GRCLCLPNVVGPKCDQCAPYHWKLASG 475
Query: 60 VDCSVNCLCNNHST----CVHGIGICDECHDWTTGDHC-----QYCRAGSYGNATTQEGC 110
C C C+ H++ C G C C + G C + C +YG+ T GC
Sbjct: 476 QGCEP-CACDPHNSLSPQCNQFTGQCP-CREGFGGLMCSAAAIRQCPDRTYGDVAT--GC 531
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
R CDC+ G G CD +G C+C+ G C++C GY
Sbjct: 532 RACDCDFRGTEGPG-CDKASGRCLCRPGLTGPRCDQCQRGY 571
Score = 145 (56.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 28/84 (33%), Positives = 39/84 (46%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C C + G+ C C+ G G +GC +CDCN G+ CD +G C+C
Sbjct: 397 GQC-VCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDMPCDEESGRCLCLP 455
Query: 138 NTQGKNCERCLPGYYGDPTDGGTC 161
N G C++C P Y+ G C
Sbjct: 456 NVVGPKCDQCAP-YHWKLASGQGC 478
Score = 130 (50.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 35/108 (32%), Positives = 53/108 (49%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ--EG-----CRKCDCNSHGNS------ 121
VH + +C H+ T G +C+ C A Y N + EG C++CDCN H +
Sbjct: 275 VHDVCVCQ--HN-TAGPNCERC-APFYNNRPWRPAEGQDAHECQRCDCNGHSETCHFDPA 330
Query: 122 VLGVCD-SITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMA 167
V + G C C+D+T+GKNCERC Y+ + G + C++
Sbjct: 331 VFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCIS 378
Score = 50 (22.7 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
C + E C + +C+C P TGP C +
Sbjct: 536 CDFRGTEGPGCDKASGRCLCRPGLTGPRCDQ 566
Score = 47 (21.6 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 20/64 (31%), Positives = 22/64 (34%)
Query: 310 TCINNQCVCPPRRT--GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLI 367
TCI+ C C P G C C E + CDL G T G T
Sbjct: 375 TCIS--CECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPG--FT-GLTYANPQGCH 429
Query: 368 RCTC 371
RC C
Sbjct: 430 RCDC 433
Score = 45 (20.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 313 NNQCVCPPRRTGPDCQE 329
+ +C+C P GP C +
Sbjct: 448 SGRCLCLPNVVGPKCDQ 464
>MGI|MGI:2685177 [details] [associations]
symbol:Megf10 "multiple EGF-like-domains 10" species:10090
"Mus musculus" [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0014719 "satellite cell activation"
evidence=IMP] [GO:0014816 "satellite cell differentiation"
evidence=ISO;IMP] [GO:0014841 "satellite cell proliferation"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IMP;IDA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0051147 "regulation of muscle cell
differentiation" evidence=ISO] [GO:0055001 "muscle cell
development" evidence=ISO] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 MGI:MGI:2685177
GO:GO:0016021 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 HSSP:P01132
GO:GO:0051147 CTD:84466 HOVERGEN:HBG108333 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AK147238 EMBL:AK148084
EMBL:AK166316 EMBL:BC075647 IPI:IPI00453778 RefSeq:NP_001001979.1
UniGene:Mm.297863 ProteinModelPortal:Q6DIB5 SMR:Q6DIB5
STRING:Q6DIB5 PhosphoSite:Q6DIB5 PRIDE:Q6DIB5
Ensembl:ENSMUST00000075770 Ensembl:ENSMUST00000139892 GeneID:70417
KEGG:mmu:70417 UCSC:uc008eyz.2 InParanoid:Q6DIB5 OrthoDB:EOG42JNQJ
ChiTaRS:MEGF10 NextBio:331567 Bgee:Q6DIB5 CleanEx:MM_MEGF10
Genevestigator:Q6DIB5 Uniprot:Q6DIB5
Length = 1147
Score = 186 (70.5 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 64/199 (32%), Positives = 83/199 (41%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSV-------------NCLCNNHSTCVHGIGI 80
C +KC++G C P +CQCE GW G +CS C C N + C G
Sbjct: 109 CADKCVHGRCIAPN--TCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNRALCNPITGA 166
Query: 81 CDECHDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C C G C+ C G+YGN Q +C C + G CD ITGEC C
Sbjct: 167 C-HCAAGYRGWRCEDRCEQGTYGNDCHQ----RCQCQN-G----ATCDHITGECRCSPGY 216
Query: 140 QGKNCER-CLPGYYGD------PT-DGGTCYYQCMARGMLTGP-GPQGLGSGLAERNAWE 190
G CE C PG +G P +GG C++ G + P G G G
Sbjct: 217 TGAFCEDLCPPGKHGPHCEQRCPCQNGGVCHH---VTGECSCPSGWMGTVCGQPCPEGRF 273
Query: 191 GKDTPSRECLWIIGQSLDS 209
GK+ S+EC G + D+
Sbjct: 274 GKNC-SQECQCHNGGTCDA 291
Score = 185 (70.2 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 34 CYNK--C-IY-GYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C+N C Y G CK P ++ C +C LG+ G DC++ C C N + C H G C C
Sbjct: 718 CHNGAFCSAYDGECKCTPGWTGLYCTQRCPLGFYGKDCALICQCQNGADCDHISGQCT-C 776
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G HC Q C AG+YG GCR+ CDC + NS CD ITG C C +G
Sbjct: 777 RTGFMGRHCEQKCPAGTYGY-----GCRQICDCLN--NST---CDHITGTCYCSPGWKGA 826
Query: 143 NCER 146
C++
Sbjct: 827 RCDQ 830
Score = 166 (63.5 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 87/323 (26%), Positives = 122/323 (37%)
Query: 30 NASLCYNKCIYGYCK---GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC N I G C G + C+ CE G G DC C C N +TC H G C C
Sbjct: 156 NRALC-NP-ITGACHCAAGYRGWRCEDRCEQGTYGNDCHQRCQCQNGATCDHITGEC-RC 212
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG C+ C G +G Q +C C + G GVC +TGEC C G
Sbjct: 213 SPGYTGAFCEDLCPPGKHGPHCEQ----RCPCQN-G----GVCHHVTGECSCPSGWMGTV 263
Query: 144 C-ERCLPGYYGDPT-------DGGTCYY---QCMARGMLTGPGPQG---LGSGLAERNAW 189
C + C G +G +GGTC QC TG Q +GS R A
Sbjct: 264 CGQPCPEGRFGKNCSQECQCHNGGTCDAATGQCHCSPGYTGERCQDECPVGS-YGVRCAE 322
Query: 190 EGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPD--INVPCNENAVYIYDGLPDFVTS 247
+ +C + G L + ++ RL P+ + C++ D
Sbjct: 323 ACRCVNGGKCYHVSGTCL-CEAGFSGELCEARLCPEGLYGIKCDKRCPCHLDNTHSCHPM 381
Query: 248 VG--GTHQSTTLGVFCTEDMHRGY------EVLEAKSGVMTIHYKQGKPS--EGFNATYQ 297
G G + G++C E G+ ++ ++G G+ + GF T
Sbjct: 382 SGECGCKPGWS-GLYCNETCSPGFYGEACQQICSCQNGA-DCDSVTGRCACAPGFKGT-- 437
Query: 298 IFSCPDKCPENRTCIN--NQCVC 318
C CP R IN ++C C
Sbjct: 438 --DCSTPCPLGRYGINCSSRCGC 458
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 46/129 (35%), Positives = 60/129 (46%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSV---------NCL----CNNHSTCVHGIGICDECHDW 87
G C P D SCQC GW G DCS NC+ C+N + C G C +C
Sbjct: 679 GTCN-PIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGEC-KCTPG 736
Query: 88 TTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
TG +C Q C G YG + C C C + + CD I+G+C C+ G++CE
Sbjct: 737 WTGLYCTQRCPLGFYG-----KDCALICQCQNGAD-----CDHISGQCTCRTGFMGRHCE 786
Query: 146 -RCLPGYYG 153
+C G YG
Sbjct: 787 QKCPAGTYG 795
Score = 153 (58.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 45/128 (35%), Positives = 57/128 (44%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
G+C+ P +S C C G G +CS+ C C N ++C GIC EC G CQ
Sbjct: 555 GHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGIC-ECAPGFRGTTCQR 613
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYG 153
C G YG+ +Q C +C H + G C ITG C C G C E C G +G
Sbjct: 614 ICSPGFYGHRCSQT-CPQC---VHSS---GPCHHITGLCDCLPGFTGALCNEVCPSGRFG 666
Query: 154 DPTDGGTC 161
G C
Sbjct: 667 KNC-AGVC 673
Score = 143 (55.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 42/120 (35%), Positives = 54/120 (45%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC--VHGIGICDECHDWTTGDHCQY 95
C G+ KG D S C LG G++CS C C N + C V G IC W D
Sbjct: 430 CAPGF-KGT-DCSTPCPLGRYGINCSSRCGCKNDAVCSPVDGSCICKA--GWHGVDCSIR 485
Query: 96 CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
C +G++G GC C C +G G C+++ G C C +G CE C G YG
Sbjct: 486 CPSGTWGF-----GCNLTCQC-LNG----GACNTLDGTCTCAPGWRGAKCEFPCQDGTYG 535
Score = 130 (50.8 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 44/142 (30%), Positives = 56/142 (39%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTT 89
+C+ G D +C C GW G C C C C H D CH TT
Sbjct: 500 QCLNGGACNTLDGTCTCAPGWRGAKCEFPCQDGTYGLNCAERCDCSHA----DGCHP-TT 554
Query: 90 GDHCQYCRAGSYG---NATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCE 145
G HC+ C G G ++ EG +C+ G C G C C +G C+
Sbjct: 555 G-HCR-CLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 612
Query: 146 R-CLPGYYGDPTDGGTCYYQCM 166
R C PG+YG TC QC+
Sbjct: 613 RICSPGFYGHRCSQ-TCP-QCV 632
Score = 128 (50.1 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 48/149 (32%), Positives = 65/149 (43%)
Query: 30 NASL-CYNK----CIY--GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHST--CV 75
N SL CY K C G C+ P + +CQ C G+ G CS C HS+ C
Sbjct: 580 NCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCH 639
Query: 76 HGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGEC 133
H G+CD C TG C + C +G +G + C C C ++G C+ I C
Sbjct: 640 HITGLCD-CLPGFTGALCNEVCPSGRFG-----KNCAGVCTCTNNGT-----CNPIDRSC 688
Query: 134 ICQDNTQGKNCER-CLPGYYGDPTDGGTC 161
C G +C + C P ++G P TC
Sbjct: 689 QCYPGWIGSDCSQPCPPAHWG-PNCIHTC 716
Score = 123 (48.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 28 IFNASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICD 82
+ ++ C++ I G C P ++ C C G G +C+ C C N+ TC + I
Sbjct: 632 VHSSGPCHH--ITGLCDCLPGFTGALCNEVCPSGRFGKNCAGVCTCTNNGTC-NPIDRSC 688
Query: 83 ECHD-WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
+C+ W D Q C +G C CN H + C + GEC C G
Sbjct: 689 QCYPGWIGSDCSQPCPPAHWG-----PNCIHT-CNCHNGAF---CSAYDGECKCTPGWTG 739
Query: 142 KNC-ERCLPGYYG 153
C +RC G+YG
Sbjct: 740 LYCTQRCPLGFYG 752
Score = 66 (28.3 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C TC QC C P TG CQ+E CP
Sbjct: 282 QCHNGGTCDAATGQCHCSPGYTGERCQDE-CP 312
Score = 57 (25.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 12/55 (21%), Positives = 20/55 (36%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITH 356
+C C ++ C+C +G C+ +CP + C L H H
Sbjct: 325 RCVNGGKCYHVSGTCLCEAGFSGELCEARLCPEGLYGIKCDKRCPCHLDNTHSCH 379
Score = 57 (25.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNE-----CHEF---LNHGTCDLLLTG 351
+C C I+ QC C G C+++ CP C + LN+ TCD + TG
Sbjct: 760 QCQNGADCDHISGQCTCRTGFMGRHCEQK-CPAGTYGYGCRQICDCLNNSTCDHI-TG 815
Score = 56 (24.8 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 289 SEGF--NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICP 333
S GF A QI SC + + + +C C P G DC CP
Sbjct: 401 SPGFYGEACQQICSCQNGA--DCDSVTGRCACAPGFKGTDCSTP-CP 444
Score = 56 (24.8 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 21/68 (30%), Positives = 27/68 (39%)
Query: 289 SEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEFL- 340
S GF +CP + C I C C P TG C E +CP+ C
Sbjct: 616 SPGFYGHRCSQTCPQCVHSSGPCHHITGLCDCLPGFTGALCNE-VCPSGRFGKNCAGVCT 674
Query: 341 --NHGTCD 346
N+GTC+
Sbjct: 675 CTNNGTCN 682
Score = 55 (24.4 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCP--ENRTC--INNQCVCPPRRTGPDCQE 329
++G M H +Q P+ TY + C C N TC I C C P G C +
Sbjct: 777 RTGFMGRHCEQKCPA----GTYG-YGCRQICDCLNNSTCDHITGTCYCSPGWKGARCDQ 830
Score = 54 (24.1 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 306 PENRTC------INNQCV--CPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVHI 354
P +R+C I + C CPP GP+C C N C + C TG++
Sbjct: 683 PIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGECKCTPGWTGLYC 742
Query: 355 THGRTL-HYQVDL-IRCTCR 372
T L Y D + C C+
Sbjct: 743 TQRCPLGFYGKDCALICQCQ 762
Score = 53 (23.7 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTG 351
C + C ++ C+C G DC CP+ F + TC L G
Sbjct: 458 CKNDAVCSPVDGSCICKAGWHGVDCSIR-CPSGTWGFGCNLTCQCLNGG 505
Score = 49 (22.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 301 CPDKCP---EN-RTC--INNQCVCPPRRTGPDCQEEICP 333
C +CP +N +C ++ +C C P +G C E P
Sbjct: 364 CDKRCPCHLDNTHSCHPMSGECGCKPGWSGLYCNETCSP 402
Score = 46 (21.3 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 300 SCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEIC 332
S P C +C + C C P G CQ IC
Sbjct: 582 SLPCYCKNGASCSPDDGICECAPGFRGTTCQR-IC 615
Score = 41 (19.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNECHEFLNHGTCD 346
+C + ++ VC R GP+C C N + G C+
Sbjct: 558 RCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICE 601
Score = 41 (19.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 15/57 (26%), Positives = 20/57 (35%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLL-LTGVHITHG 357
+C C ++ C C P G C E C + + CD G H T G
Sbjct: 500 QCLNGGACNTLDGTCTCAPGWRGAKC-EFPCQDGTYGLNCAERCDCSHADGCHPTTG 555
>ZFIN|ZDB-GENE-080807-4 [details] [associations]
symbol:hspg2 "heparan sulfate proteoglycan 2"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 ZFIN:ZDB-GENE-080807-4
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 GeneTree:ENSGT00530000063501
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0007519 Pfam:PF12661 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
EMBL:CR936463 EMBL:CR855310 IPI:IPI00889358
Ensembl:ENSDART00000111029 Bgee:F1RCP6 Uniprot:F1RCP6
Length = 3422
Score = 189 (71.6 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 51/131 (38%), Positives = 63/131 (48%)
Query: 43 CKGPPDYS---CQ-CELGWT----GV---DCSVNCLCNNHS-TCVHGIGICDECHDWTTG 90
C+ PP YS CQ C G+T G+ C C CN HS TC GIC C T G
Sbjct: 1448 CQCPPGYSGLSCQDCASGYTRTGGGLYLGHCEP-CECNGHSDTCHPETGICTNCQHNTKG 1506
Query: 91 DHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSI-TG--ECI-CQDNTQGK 142
+ C+ C G +G+ T T E C+ C C N C+S+ G +C CQ G+
Sbjct: 1507 ELCEQCVDGFFGDPTAGTPEDCQPCACPGTDPENQFSRTCESLGNGGYQCTACQPGYLGQ 1566
Query: 143 NCERCLPGYYG 153
CERC PGY G
Sbjct: 1567 YCERCAPGYVG 1577
Score = 189 (71.6 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 50/137 (36%), Positives = 64/137 (46%)
Query: 38 CIYGYCKGPPDYSCQ-CELGWT---GV---DCSVNCLCNNH-STCVHGIGICDECHDWTT 89
C GY GP SCQ C++G+T G+ C C C+ H S+C G C C T
Sbjct: 1051 CPQGY-SGP---SCQDCDVGYTRTPGLYLGTCE-KCECHGHASSCDSETGDCLNCLHNTI 1105
Query: 90 GDHCQYCRAGSYGNATT--QEGCRKCDCNSHGNSVLGVCD-SITGE--CICQDNTQGKNC 144
G C+ C +G YGN T + CR C C ++ C G+ C C G+ C
Sbjct: 1106 GRRCENCISGYYGNPKTGDPQACRPCPCLGQTSNQPSSCYLGSDGQPVCECPAGYTGRRC 1165
Query: 145 ERCLPGYYGDPTDGGTC 161
ERC PGY G+P G C
Sbjct: 1166 ERCAPGYIGNPQLGQRC 1182
Score = 164 (62.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 39/103 (37%), Positives = 49/103 (47%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECI-CQDNTQG 141
C +G CQ C G G C KC+C+ H +S CDS TG+C+ C NT G
Sbjct: 1051 CPQGYSGPSCQDCDVGYTRTPGLYLGTCEKCECHGHASS----CDSETGDCLNCLHNTIG 1106
Query: 142 KNCERCLPGYYGDPTDGG--TCYYQCMARGMLTG-PGPQGLGS 181
+ CE C+ GYYG+P G C C G + P LGS
Sbjct: 1107 RRCENCISGYYGNPKTGDPQACR-PCPCLGQTSNQPSSCYLGS 1148
Score = 149 (57.5 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 41/139 (29%), Positives = 57/139 (41%)
Query: 43 CKGPPDYS---CQ-CELGWTGVD------CSVNCLCNNH-STCVHGIGICDECHDWTTGD 91
C+ P YS C+ C G+ V C+ C CN H S C G C C T G
Sbjct: 656 CRCPAGYSGLSCESCSPGFERVPGPYLGICA-GCNCNGHASACDPVSGHCLSCQHKTEGA 714
Query: 92 HCQYCRAGSYGNATT--QEGCRKCDC--NSHGNSVLGVC---DSITGEC-ICQDNTQGKN 143
C+ C+ G +G+ + + C+ C C C C C++ G+
Sbjct: 715 QCEKCKPGFFGDPSRGQYDDCKPCPCPYTETSRRFSDTCFLDHDNQATCDACREGYTGRR 774
Query: 144 CERCLPGYYGDPTD-GGTC 161
CE+C PGY G+P G C
Sbjct: 775 CEKCAPGYVGNPLQPNGKC 793
Score = 148 (57.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 83 ECHDWTTGDHCQYCRAG--SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNT 139
+C +G CQ C +G G C C+CN H ++ C TG C CQ NT
Sbjct: 1449 QCPPGYSGLSCQDCASGYTRTGGGLYLGHCEPCECNGHSDT----CHPETGICTNCQHNT 1504
Query: 140 QGKNCERCLPGYYGDPTDG 158
+G+ CE+C+ G++GDPT G
Sbjct: 1505 KGELCEQCVDGFFGDPTAG 1523
Score = 112 (44.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 44/148 (29%), Positives = 55/148 (37%)
Query: 34 CYNKCIYGYCKGP----PDYS--CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDW 87
C N CI GY P P C C LG T S +C + G +C EC
Sbjct: 1109 CEN-CISGYYGNPKTGDPQACRPCPC-LGQTSNQPS-SCYLGSD-----GQPVC-ECPAG 1159
Query: 88 TTGDHCQYCRAGSYGNATTQEGC----RKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG C+ C G GN + C DC S C TG C C+ N +G
Sbjct: 1160 YTGRRCERCAPGYIGNPQLGQRCTPGSNNGDCYRCDQSGSEGCSG-TGVCRCKMNVEGPT 1218
Query: 144 CERCLPG-YYGDPTDGGTCYYQCMARGM 170
C C G ++ P + C C G+
Sbjct: 1219 CSSCKQGTFHLSPANKDGCL-SCFCMGV 1245
Score = 73 (30.8 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 300 SC--PDKCPENRTCINNQCVCPPRRTGPDCQE 329
SC +C +C+NN CVCP +G C++
Sbjct: 3177 SCRHSSQCQNGGSCVNNHCVCPAGYSGRHCEK 3208
Score = 58 (25.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 19/52 (36%), Positives = 23/52 (44%)
Query: 286 GKPSEGFNATYQIFSCPDKCPEN---RTC--INN---QCV-CPPRRTGPDCQ 328
G P+ G Q +CP PEN RTC + N QC C P G C+
Sbjct: 1518 GDPTAGTPEDCQPCACPGTDPENQFSRTCESLGNGGYQCTACQPGYLGQYCE 1569
Score = 53 (23.7 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 302 PDKCPENRTCINNQCVCPPRRTGPDCQE 329
P R +C CP +GP CQ+
Sbjct: 1035 PHSTGNERAMEVEECACPQGYSGPSCQD 1062
Score = 51 (23.0 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 315 QCVCPPRRTGPDCQE 329
QC CPP +G CQ+
Sbjct: 1447 QCQCPPGYSGLSCQD 1461
Score = 50 (22.7 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 300 SCPDK-CPENRTCINN-----QCVCPPRRTGPDCQEEICPNECH 337
+C D+ C + TC ++ +C C TG +CQ + CH
Sbjct: 2878 TCKDRPCQNDGTCEDSVASLYKCTCKRGFTGSNCQHHSSLH-CH 2920
Score = 48 (22.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/118 (26%), Positives = 45/118 (38%)
Query: 248 VGGTHQSTTLGVFCTEDMHRG----YEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPD 303
V GT Q G+ E++ G Y +L +G+ T K IF D
Sbjct: 2809 VNGTSQGKFKGLDLNEELFVGGYPNYSMLAKTAGLKTGFVGCIKQLI-IQGDEVIFKDLD 2867
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLH 361
K + T ++N CP + P CQ + + L TC TG + H +LH
Sbjct: 2868 K---SSTGVSN---CPTCKDRP-CQNDGTCEDSVASLYKCTCKRGFTGSNCQHHSSLH 2918
Score = 45 (20.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 311 CINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTG 351
C++ P T DCQ CP E TC+ L G
Sbjct: 1512 CVDGFFGDPTAGTPEDCQPCACPGTDPENQFSRTCESLGNG 1552
Score = 40 (19.1 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 271 VLEAKSGVMTIHYKQGKPSEGFNATYQI 298
VL+ SG+ HY Q KP AT +
Sbjct: 954 VLQG-SGIFLEHYSQIKPLPRVPATITV 980
>UNIPROTKB|P10039 [details] [associations]
symbol:TNC "Tenascin" species:9031 "Gallus gallus"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0005578 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 Gene3D:3.90.215.10
Gene3D:4.10.530.10 InterPro:IPR014716 InterPro:IPR014715
Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS00514
PROSITE:PS51406 InterPro:IPR013111 Pfam:PF07974 Pfam:PF12661
EMBL:M23121 EMBL:X08031 EMBL:X08030 EMBL:J03641 EMBL:M20816
IPI:IPI00582445 IPI:IPI00596535 IPI:IPI01017282 PIR:A31930
UniGene:Gga.3818 UniGene:Gga.51524 PDB:1QR4 PDBsum:1QR4
ProteinModelPortal:P10039 SMR:P10039 IntAct:P10039 STRING:P10039
HOVERGEN:HBG008949 InParanoid:P10039 OrthoDB:EOG4MSCX9
EvolutionaryTrace:P10039 Uniprot:P10039
Length = 1808
Score = 136 (52.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/132 (30%), Positives = 59/132 (44%)
Query: 34 CYNKC-IYGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICD------E 83
C N C +G C C C+ G+TG DC + C C+N CV G +CD +
Sbjct: 471 CPNDCNSHGRCVNG---QCVCDEGYTGEDCGELRCPNDCHNRGRCVEGRCVCDNGFMGED 527
Query: 84 CHDWTTGDHC-QYCRAGSYGNATTQEG-----CRKCDCNSHGNSVLGVCDSITGECICQD 137
C + + + C Q+ R G EG CR+ C + N+V G C + G C+C++
Sbjct: 528 CGELSCPNDCHQHGRCVD-GRCVCHEGFTGEDCRERSCPNDCNNV-GRC--VEGRCVCEE 583
Query: 138 NTQGKNCERCLP 149
G +C P
Sbjct: 584 GYMGIDCSDVSP 595
Score = 130 (50.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 22/45 (48%), Positives = 26/45 (57%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP+ C + C+N QCVC TG DC E CPN+CH N G C
Sbjct: 471 CPNDCNSHGRCVNGQCVCDEGYTGEDCGELRCPNDCH---NRGRC 512
Score = 130 (50.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 41/130 (31%), Positives = 53/130 (40%)
Query: 42 YCKGPPDYS-----CQCELGWTGVDCSV-----NCLCNNHSTCVHGIGICDECHDWTTGD 91
YC G +YS C CE GW G +CS NCL N CV G IC+E TG+
Sbjct: 162 YCSGHGNYSTEICGCVCEPGWKGPNCSEPACPRNCL--NRGLCVRGKCICEEGF---TGE 216
Query: 92 HCQY--CRAGSYGNATTQEGCRKC-------DCNS----HGNSVLGVCDSITGECICQDN 138
C C + +G C DC HG + G C + G C+C +
Sbjct: 217 DCSQAACPSDCNDQGKCVDGVCVCFEGYTGPDCGEELCPHGCGIHGRC--VGGRCVCHEG 274
Query: 139 TQGKNCERCL 148
G++C L
Sbjct: 275 FTGEDCNEPL 284
Score = 129 (50.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 44/147 (29%), Positives = 62/147 (42%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDE------C 84
C+N+ G C C+C G+ G DC + C CN+H CV+G +CDE C
Sbjct: 444 CHNR---GRCVNG---QCECHEGFIGEDCGELRCPNDCNSHGRCVNGQCVCDEGYTGEDC 497
Query: 85 HDWTTGDHCQY---CRAGSY--GNATTQEGCRK--C--DCNSHGNSVLGVCDSITGECIC 135
+ + C C G N E C + C DC+ HG C + G C+C
Sbjct: 498 GELRCPNDCHNRGRCVEGRCVCDNGFMGEDCGELSCPNDCHQHGR-----C--VDGRCVC 550
Query: 136 QDNTQGKNC-ERCLPGYYGDPTDGGTC 161
+ G++C ER P D + G C
Sbjct: 551 HEGFTGEDCRERSCPN---DCNNVGRC 574
Score = 125 (49.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHE---FLNHGTC 345
CP+ C C++N+CVC TG DC E ICPN+C + +N GTC
Sbjct: 285 CPNNCHNRGRCVDNECVCDEGYTGEDCGELICPNDCFDRGRCIN-GTC 331
Score = 124 (48.7 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 48/158 (30%), Positives = 62/158 (39%)
Query: 34 CYNKCIY-GYC-KGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWT 88
C C+ G C +G C CE G+TG DCS C CN+ CV G+ +C E +
Sbjct: 192 CPRNCLNRGLCVRG----KCICEEGFTGEDCSQAACPSDCNDQGKCVDGVCVCFEGY--- 244
Query: 89 TGDHC--QYCRAGSY-------GNATTQEGCRKCDCNSH--GNSVLGVCDSITGECICQD 137
TG C + C G G EG DCN N+ + EC+C +
Sbjct: 245 TGPDCGEELCPHGCGIHGRCVGGRCVCHEGFTGEDCNEPLCPNNCHNRGRCVDNECVCDE 304
Query: 138 NTQGKNC-ERCLPGYYGDPTDGGTCYY-QCMARGMLTG 173
G++C E P D D G C C TG
Sbjct: 305 GYTGEDCGELICPN---DCFDRGRCINGTCFCEEGYTG 339
Score = 123 (48.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 22/45 (48%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP+ C CIN QCVC G DC E CPN+CH N G C
Sbjct: 409 CPNDCHNRGRCINGQCVCDEGFIGEDCGELRCPNDCH---NRGRC 450
Score = 122 (48.0 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SCP+ C ++ C++ +CVC TG DC+E CPN+C+ N G C
Sbjct: 532 SCPNDCHQHGRCVDGRCVCHEGFTGEDCRERSCPNDCN---NVGRC 574
Score = 119 (46.9 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 45/154 (29%), Positives = 65/154 (42%)
Query: 33 LCYNKCI-YGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWT 88
+C N C G C +C CE G+TG DC + C CN + C +G+ +C H+
Sbjct: 315 ICPNDCFDRGRCING---TCFCEEGYTGEDCGELTCPNNCNGNGRCENGLCVC---HEGF 368
Query: 89 TGDHCQY------CRAGSY---GNATTQEG-----CRKCDCNSHGNSVLGVCDSITGECI 134
GD C C + G EG C + C + ++ G C I G+C+
Sbjct: 369 VGDDCSQKRCPKDCNNRGHCVDGRCVCHEGYLGEDCGELRCPNDCHN-RGRC--INGQCV 425
Query: 135 CQDNTQGKNCE--RCLPGYYGDPTDGGTCYY-QC 165
C + G++C RC P D + G C QC
Sbjct: 426 CDEGFIGEDCGELRC-PN---DCHNRGRCVNGQC 455
Score = 116 (45.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP+ C C+ +CVC G DC E CPN+CH+ HG C
Sbjct: 502 CPNDCHNRGRCVEGRCVCDNGFMGEDCGELSCPNDCHQ---HGRC 543
Score = 111 (44.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP+ C C+N QC C G DC E CPN+C+ +HG C
Sbjct: 440 CPNDCHNRGRCVNGQCECHEGFIGEDCGELRCPNDCN---SHGRC 481
Score = 110 (43.8 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C C++ +CVC G DC E CPN+CH N G C
Sbjct: 378 CPKDCNNRGHCVDGRCVCHEGYLGEDCGELRCPNDCH---NRGRC 419
Score = 110 (43.8 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITH 356
CP+ C + CIN C C TG DC E CPN C+ +G C+ G+ + H
Sbjct: 316 CPNDCFDRGRCINGTCFCEEGYTGEDCGELTCPNNCN---GNGRCE---NGLCVCH 365
Score = 106 (42.4 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRT 359
+CP+ C N C N CVC G DC ++ CP +C+ N G C + G + H
Sbjct: 346 TCPNNCNGNGRCENGLCVCHEGFVGDDCSQKRCPKDCN---NRGHC---VDGRCVCHEGY 399
Query: 360 LHYQVDLIRC 369
L +RC
Sbjct: 400 LGEDCGELRC 409
Score = 101 (40.6 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 41/134 (30%), Positives = 50/134 (37%)
Query: 48 DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
D C C G+TG DC C HG GI C G C C G G +
Sbjct: 235 DGVCVCFEGYTGPDCG-------EELCPHGCGIHGRC----VGGRC-VCHEGFTGEDCNE 282
Query: 108 EGCRKCDCNSHGNSVLG--VCDS-ITGE-C---ICQDNTQGKN-CER----CLPGYYGDP 155
C +C++ G V VCD TGE C IC ++ + C C GY G+
Sbjct: 283 PLCPN-NCHNRGRCVDNECVCDEGYTGEDCGELICPNDCFDRGRCINGTCFCEEGYTGED 341
Query: 156 TDGGTCYYQCMARG 169
TC C G
Sbjct: 342 CGELTCPNNCNGNG 355
Score = 97 (39.2 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 40/139 (28%), Positives = 56/139 (40%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
G+C D C C G+ G DC + C C+N C++G +CDE G+ C R
Sbjct: 386 GHCV---DGRCVCHEGYLGEDCGELRCPNDCHNRGRCINGQCVCDEGF---IGEDCGELR 439
Query: 98 AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE--RCLPGYYGDP 155
C DC++ G C + G+C C + G++C RC P D
Sbjct: 440 ------------CPN-DCHNRGR-----C--VNGQCECHEGFIGEDCGELRC-PN---DC 475
Query: 156 TDGGTCYY-QCMARGMLTG 173
G C QC+ TG
Sbjct: 476 NSHGRCVNGQCVCDEGYTG 494
Score = 74 (31.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNE 335
SCP+ C C+ +CVC G DC + P E
Sbjct: 563 SCPNDCNNVGRCVEGRCVCEEGYMGIDCSDVSPPTE 598
Score = 46 (21.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 98 AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTD 157
AG N+ T EG + D + + I G C+C+ +G NC +P
Sbjct: 144 AGCCPNSQTAEG--RLDTAPYCSGHGNYSTEICG-CVCEPGWKGPNCS--------EPA- 191
Query: 158 GGTCYYQCMARGM 170
C C+ RG+
Sbjct: 192 ---CPRNCLNRGL 201
>UNIPROTKB|F1N8F4 [details] [associations]
symbol:TNC "Tenascin" species:9031 "Gallus gallus"
[GO:0005604 "basement membrane" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0014012 "peripheral nervous
system axon regeneration" evidence=IEA] [GO:0045545 "syndecan
binding" evidence=IEA] [GO:0060739 "mesenchymal-epithelial cell
signaling involved in prostate gland development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009611 GO:GO:0008284 SUPFAM:SSF49265 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0010628 GO:GO:0005604
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS51406 GO:GO:0005614 InterPro:IPR013111 Pfam:PF07974
Pfam:PF12661 UniGene:Gga.3818 UniGene:Gga.51524 CTD:3371 KO:K06252
OMA:GQRSCPN GeneTree:ENSGT00690000102056 EMBL:AADN02026872
IPI:IPI00587380 RefSeq:NP_990787.2 Ensembl:ENSGALT00000011523
GeneID:396440 KEGG:gga:396440 NextBio:20816481 Uniprot:F1N8F4
Length = 1808
Score = 133 (51.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 40/132 (30%), Positives = 59/132 (44%)
Query: 34 CYNKC-IYGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICD------E 83
C N C +G C C C+ G+TG DC + C C+N CV G +CD +
Sbjct: 471 CPNDCNSHGRCVNG---QCVCDEGYTGEDCGELRCPNDCHNRGRCVEGRCVCDNGFMGED 527
Query: 84 CHDWTTGDHC-QYCRAGSYGNAT-----TQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
C + + + C Q+ R G T E CR+ C + N+V G C + G C+C++
Sbjct: 528 CGELSCPNDCHQHGRCVD-GRCVCHEDFTGEDCRERSCPNDCNNV-GRC--VEGRCVCEE 583
Query: 138 NTQGKNCERCLP 149
G +C P
Sbjct: 584 GYMGIDCSDVSP 595
Score = 130 (50.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 22/45 (48%), Positives = 26/45 (57%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP+ C + C+N QCVC TG DC E CPN+CH N G C
Sbjct: 471 CPNDCNSHGRCVNGQCVCDEGYTGEDCGELRCPNDCH---NRGRC 512
Score = 130 (50.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 41/130 (31%), Positives = 53/130 (40%)
Query: 42 YCKGPPDYS-----CQCELGWTGVDCSV-----NCLCNNHSTCVHGIGICDECHDWTTGD 91
YC G +YS C CE GW G +CS NCL N CV G IC+E TG+
Sbjct: 162 YCSGHGNYSTEICGCVCEPGWKGPNCSEPACPRNCL--NRGLCVRGKCICEEGF---TGE 216
Query: 92 HCQY--CRAGSYGNATTQEGCRKC-------DCNS----HGNSVLGVCDSITGECICQDN 138
C C + +G C DC HG + G C + G C+C +
Sbjct: 217 DCSQAACPSDCNDQGKCVDGVCVCFEGYTGPDCGEELCPHGCGIHGRC--VGGRCVCHEG 274
Query: 139 TQGKNCERCL 148
G++C L
Sbjct: 275 FTGEDCNEPL 284
Score = 130 (50.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 44/147 (29%), Positives = 63/147 (42%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDE------C 84
C+N+ G C C+C G+ G DC + C CN+H CV+G +CDE C
Sbjct: 444 CHNR---GRCVNG---QCECHEGFIGEDCGELRCPNDCNSHGRCVNGQCVCDEGYTGEDC 497
Query: 85 HDWTTGDHCQY---CRAGSY--GNATTQEGCRK--C--DCNSHGNSVLGVCDSITGECIC 135
+ + C C G N E C + C DC+ HG C + G C+C
Sbjct: 498 GELRCPNDCHNRGRCVEGRCVCDNGFMGEDCGELSCPNDCHQHGR-----C--VDGRCVC 550
Query: 136 QDNTQGKNC-ERCLPGYYGDPTDGGTC 161
++ G++C ER P D + G C
Sbjct: 551 HEDFTGEDCRERSCPN---DCNNVGRC 574
Score = 125 (49.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHE---FLNHGTC 345
CP+ C C++N+CVC TG DC E ICPN+C + +N GTC
Sbjct: 285 CPNNCHNRGRCVDNECVCDEGYTGEDCGELICPNDCFDRGRCIN-GTC 331
Score = 124 (48.7 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 48/158 (30%), Positives = 62/158 (39%)
Query: 34 CYNKCIY-GYC-KGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWT 88
C C+ G C +G C CE G+TG DCS C CN+ CV G+ +C E +
Sbjct: 192 CPRNCLNRGLCVRG----KCICEEGFTGEDCSQAACPSDCNDQGKCVDGVCVCFEGY--- 244
Query: 89 TGDHC--QYCRAGSY-------GNATTQEGCRKCDCNSH--GNSVLGVCDSITGECICQD 137
TG C + C G G EG DCN N+ + EC+C +
Sbjct: 245 TGPDCGEELCPHGCGIHGRCVGGRCVCHEGFTGEDCNEPLCPNNCHNRGRCVDNECVCDE 304
Query: 138 NTQGKNC-ERCLPGYYGDPTDGGTCYY-QCMARGMLTG 173
G++C E P D D G C C TG
Sbjct: 305 GYTGEDCGELICPN---DCFDRGRCINGTCFCEEGYTG 339
Score = 122 (48.0 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP+ C C+N QCVC G DC E CPN+CH N G C
Sbjct: 409 CPNDCHNRGRCVNGQCVCDEGFIGEDCGELRCPNDCH---NRGRC 450
Score = 122 (48.0 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SCP+ C ++ C++ +CVC TG DC+E CPN+C+ N G C
Sbjct: 532 SCPNDCHQHGRCVDGRCVCHEDFTGEDCRERSCPNDCN---NVGRC 574
Score = 121 (47.7 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 37/120 (30%), Positives = 51/120 (42%)
Query: 48 DYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDE------CHDWTTGDHCQYCRA 98
D C C G+ G DC + C C+N CV+G +CDE C + + C
Sbjct: 390 DGRCVCHEGYLGEDCGELRCPNDCHNRGRCVNGQCVCDEGFIGEDCGELRCPNDCHNRGR 449
Query: 99 GSYGNATTQEG-----CR--KC--DCNSHGNSVLGVCDSITGECICQDNTQGKNCE--RC 147
G EG C +C DCNSHG C + G+C+C + G++C RC
Sbjct: 450 CVNGQCECHEGFIGEDCGELRCPNDCNSHGR-----C--VNGQCVCDEGYTGEDCGELRC 502
Score = 118 (46.6 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 45/153 (29%), Positives = 63/153 (41%)
Query: 33 LCYNKCI-YGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWT 88
+C N C G C +C CE G+TG DC + C CN + C +G+ +C H+
Sbjct: 315 ICPNDCFDRGRCING---TCFCEEGYTGEDCGELTCPNNCNGNGRCENGLCVC---HEGF 368
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC---DSITGE-C---ICQDNTQG 141
GD C +Q+ C K DCN+ G V G C + GE C C ++
Sbjct: 369 VGDDC------------SQKRCPK-DCNNRGRCVDGRCVCHEGYLGEDCGELRCPNDCHN 415
Query: 142 KN-CER----CLPGYYGDPTDGGTCYYQCMARG 169
+ C C G+ G+ C C RG
Sbjct: 416 RGRCVNGQCVCDEGFIGEDCGELRCPNDCHNRG 448
Score = 116 (45.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP+ C C+ +CVC G DC E CPN+CH+ HG C
Sbjct: 502 CPNDCHNRGRCVEGRCVCDNGFMGEDCGELSCPNDCHQ---HGRC 543
Score = 111 (44.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP+ C C+N QC C G DC E CPN+C+ +HG C
Sbjct: 440 CPNDCHNRGRCVNGQCECHEGFIGEDCGELRCPNDCN---SHGRC 481
Score = 111 (44.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C C++ +CVC G DC E CPN+CH N G C
Sbjct: 378 CPKDCNNRGRCVDGRCVCHEGYLGEDCGELRCPNDCH---NRGRC 419
Score = 110 (43.8 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITH 356
CP+ C + CIN C C TG DC E CPN C+ +G C+ G+ + H
Sbjct: 316 CPNDCFDRGRCINGTCFCEEGYTGEDCGELTCPNNCN---GNGRCE---NGLCVCH 365
Score = 107 (42.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRT 359
+CP+ C N C N CVC G DC ++ CP +C+ N G C + G + H
Sbjct: 346 TCPNNCNGNGRCENGLCVCHEGFVGDDCSQKRCPKDCN---NRGRC---VDGRCVCHEGY 399
Query: 360 LHYQVDLIRC 369
L +RC
Sbjct: 400 LGEDCGELRC 409
Score = 74 (31.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNE 335
SCP+ C C+ +CVC G DC + P E
Sbjct: 563 SCPNDCNNVGRCVEGRCVCEEGYMGIDCSDVSPPTE 598
Score = 46 (21.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 98 AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTD 157
AG N+ T EG + D + + I G C+C+ +G NC +P
Sbjct: 144 AGCCPNSQTAEG--RLDTAPYCSGHGNYSTEICG-CVCEPGWKGPNCS--------EPA- 191
Query: 158 GGTCYYQCMARGM 170
C C+ RG+
Sbjct: 192 ---CPRNCLNRGL 201
>UNIPROTKB|F1MMT2 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0030155 GO:GO:0007155 GO:GO:0042383
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:DAAA02026607 EMBL:DAAA02026593 EMBL:DAAA02026594
EMBL:DAAA02026595 EMBL:DAAA02026596 EMBL:DAAA02026597
EMBL:DAAA02026598 EMBL:DAAA02026599 EMBL:DAAA02026600
EMBL:DAAA02026601 EMBL:DAAA02026602 EMBL:DAAA02026603
EMBL:DAAA02026604 EMBL:DAAA02026605 EMBL:DAAA02026606
IPI:IPI00924129 Ensembl:ENSBTAT00000061257 Uniprot:F1MMT2
Length = 3085
Score = 202 (76.2 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 47/144 (32%), Positives = 71/144 (49%)
Query: 29 FNASLCYNKCIYGYCKGP--PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECH 85
++ C +C GY P P SCQ C+ +D S+ C++ S G C C
Sbjct: 802 YSGQRC-ERCAEGYFGQPSVPGGSCQPCQCN-DNLDFSIPGSCDSLS------GSCLICK 853
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
TTG +C+ C G +G+A + C+ C CN++G S VC + TG+C C+ N QG+ C+
Sbjct: 854 PGTTGRYCELCADGYFGDAVDAKNCQPCHCNANG-SFSEVCHAQTGQCECKPNVQGRRCD 912
Query: 146 RCLPGYYGDPTDGGTCYYQCMARG 169
C P +G + G C + G
Sbjct: 913 ECKPETFGLQSARGCIPCNCNSFG 936
Score = 176 (67.0 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 43/121 (35%), Positives = 54/121 (44%)
Query: 64 VNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDCN--SHG 119
V C C+ HS C IC C T GD C+ C G YG C++C C S
Sbjct: 1381 VPCQCHGHSNLCDPETSICQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCACPLISSS 1440
Query: 120 NSVLGVC--DSITG-ECI-CQDNTQGKNCERCLPGYYGDPTD-GGTCYY-QCMARGMLTG 173
N+ C + + C C +GK CERC PGY G P+ GG+C +C G L
Sbjct: 1441 NNFSPSCIMEGLDDYRCTACPRGYEGKYCERCAPGYAGSPSSPGGSCQECECDPHGSLPV 1500
Query: 174 P 174
P
Sbjct: 1501 P 1501
Score = 174 (66.3 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 42/112 (37%), Positives = 54/112 (48%)
Query: 66 CLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGN 120
C C H+ +C G C C D T G +C C G YG+ T T + C+ C C NS N
Sbjct: 720 CQCFGHAESCDDTTGECLNCKDHTDGPYCDKCLPGFYGDPTKGTSDDCQPCACPLNSPSN 779
Query: 121 SVLGVC--DSITGECICQD---NTQGKNCERCLPGYYGDPT-DGGTCY-YQC 165
+ C D G IC + G+ CERC GY+G P+ GG+C QC
Sbjct: 780 NFSPTCHMDRSLG-LICDECPVGYSGQRCERCAEGYFGQPSVPGGSCQPCQC 830
Score = 173 (66.0 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 35/84 (41%), Positives = 45/84 (53%)
Query: 78 IGICDECHDWTTGDHCQYCRAGSYG-NATTQEG-CRKCDCNSHGNSVLGVCDSITGECI- 134
+ +C +C TG C+ C N T G C C C H S CD TGEC+
Sbjct: 684 VEVC-QCPPGYTGSSCESCWPRHRRVNGTIFGGLCEPCQCFGHAES----CDDTTGECLN 738
Query: 135 CQDNTQGKNCERCLPGYYGDPTDG 158
C+D+T G C++CLPG+YGDPT G
Sbjct: 739 CKDHTDGPYCDKCLPGFYGDPTKG 762
Score = 163 (62.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 43/129 (33%), Positives = 54/129 (41%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG 102
CK P + Q G + C+ N + C G C C TG C C G Y
Sbjct: 914 CK-PETFGLQSARGC--IPCNCNSFGSKSFDCEES-GQC-WCQPGVTGKKCDRCAHG-YF 967
Query: 103 NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY 162
N + GC CDC+ GN+ CD TG CIC NT G+ C +C P +G G
Sbjct: 968 NFQ-EGGCTACDCSHLGNN----CDPKTGRCICPPNTIGEKCSKCAPRTWGHSITTGCKA 1022
Query: 163 YQCMARGML 171
C + G L
Sbjct: 1023 CNCSSVGSL 1031
Score = 162 (62.1 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 47/159 (29%), Positives = 75/159 (47%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGV------DCSVNCLC------NNHS-TCV-HG 77
S+C N C + + G D+ +C LG+ G+ DC C C NN S +C+ G
Sbjct: 1397 SICQN-CQH-HTAG--DFCERCALGYYGIVKGLPNDCQ-QCACPLISSSNNFSPSCIMEG 1451
Query: 78 IGI--CDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECI 134
+ C C G +C+ C G G+ ++ G C++C+C+ HG S+ CD + G C
Sbjct: 1452 LDDYRCTACPRGYEGKYCERCAPGYAGSPSSPGGSCQECECDPHG-SLPVPCDPVMGICT 1510
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
C+ G C+ C G+ + + C +C G+L G
Sbjct: 1511 CRPGATGPKCDGCEQGHAREGMECVFCGDECT--GLLLG 1547
Score = 128 (50.1 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 47/160 (29%), Positives = 67/160 (41%)
Query: 41 GYCKGPPDY---SC-QCELGWTGVDCSVNC-LCNNHST------CVHGIGICDECHDWTT 89
G C PP+ C +C G + C CN S C +G C +CH +
Sbjct: 991 GRCICPPNTIGEKCSKCAPRTWGHSITTGCKACNCSSVGSLDFQCDLNMGQC-KCHPKFS 1049
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHG--NSVLGV----CDSI--TGECICQDNTQG 141
G C C G + C CDC G +S + C I TG+C C+ N +G
Sbjct: 1050 GAKCTECTRGHWN----YPHCSPCDCFLSGTDDSTCDLETKKCSCIDQTGQCTCKVNVEG 1105
Query: 142 KNCERCLPGYYG----DPTDGGTCYY-----QCM-ARGML 171
+C+RC PG +G +P +CY QC A+G++
Sbjct: 1106 IHCDRCRPGKFGLEAKNPLGCNSCYCFGATTQCSEAKGLI 1145
Score = 57 (25.1 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTC 371
QC C P+ +G C E C + + CD L+G T T + +C+C
Sbjct: 1041 QCKCHPKFSGAKCTE--CTRGHWNYPHCSPCDCFLSG---TDDSTCDLETK--KCSC 1090
Score = 48 (22.0 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 315 QCVCPPRRTGPDCQE 329
+C+CPP G C +
Sbjct: 992 RCICPPNTIGEKCSK 1006
Score = 46 (21.3 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 316 CVCPPRRTGPDC 327
C C P TGP C
Sbjct: 1509 CTCRPGATGPKC 1520
Score = 45 (20.9 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEFLNHG--TCD 346
+ QC C P TG C C + F G CD
Sbjct: 945 SGQCWCQPGVTGKKCDR--CAHGYFNFQEGGCTACD 978
Score = 43 (20.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 286 GKPSEGFNATYQIFSCPDKCPENR---TCINNQCV------CPPRRTGPDCQ 328
G P++G + Q +CP P N TC ++ + CP +G C+
Sbjct: 757 GDPTKGTSDDCQPCACPLNSPSNNFSPTCHMDRSLGLICDECPVGYSGQRCE 808
Score = 41 (19.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 315 QCVCPPRRTGPDCQ 328
+C CPP +G C+
Sbjct: 1342 KCDCPPGYSGLSCE 1355
Score = 39 (18.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 315 QCVCPPRRTGPDCQE 329
QC C P G C E
Sbjct: 899 QCECKPNVQGRRCDE 913
>UNIPROTKB|F1MMK1 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005610 "laminin-5 complex" evidence=IEA] GO:GO:0050873
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005610
GeneTree:ENSGT00620000087753 OMA:RSQMEED EMBL:DAAA02043815
EMBL:DAAA02043816 IPI:IPI00712889 UniGene:Bt.16740
Ensembl:ENSBTAT00000022005 Uniprot:F1MMK1
Length = 1172
Score = 197 (74.4 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 42/111 (37%), Positives = 60/111 (54%)
Query: 61 DCSVNCLCNNHS-TC------------VHGIGICDECHDWTTGDHCQYCRAGSYGN---- 103
+C C CN HS TC HG G+CD C D T G +C+ C+ + N
Sbjct: 312 ECQ-RCDCNGHSETCHFDPAVFAASQGAHG-GVCDNCRDHTEGRNCERCQLHYFRNRRPG 369
Query: 104 ATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCLPGYYG 153
A QE C C+C+ G +V G CD +TG+C+C+++ QG+ C+ C PG+ G
Sbjct: 370 APIQETCIPCECDPDG-AVPGAPCDPLTGQCVCKEHVQGERCDLCKPGFTG 419
Score = 143 (55.4 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 45/160 (28%), Positives = 65/160 (40%)
Query: 8 SGLTTAKDDALSRCTVLLLYIFNASLC---YNKCI-YGYCKGPPDYSCQCELGW---TGV 60
+GLT + RC +L C +C+ + GP C W +G
Sbjct: 418 TGLTFSNPQGCHRCDCSVLGARRDVPCDEETGRCVCLPHVVGPKCDQCAPH-HWKLASGR 476
Query: 61 DCSVNCLCNNHST----CVHGIGICDECHDWTTGDHCQ-----YCRAGSYGNATTQEGCR 111
C C C+ H++ C G C C + G C+ C +YG+A GCR
Sbjct: 477 GCEP-CACDPHNSLGPQCNQFTGQC-ACREGFGGLTCRAAAIRQCPDRTYGDAAA--GCR 532
Query: 112 KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
CDC+ G G CD +G C+C+ G C++C GY
Sbjct: 533 ACDCDFRGTEGPG-CDKASGRCLCRPGLTGPRCDQCQRGY 571
Score = 135 (52.6 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C C + G+ C C+ G G + +GC +CDC+ G CD TG C+C
Sbjct: 397 GQC-VCKEHVQGERCDLCKPGFTGLTFSNPQGCHRCDCSVLGARRDVPCDEETGRCVCLP 455
Query: 138 NTQGKNCERCLPGYY 152
+ G C++C P ++
Sbjct: 456 HVVGPKCDQCAPHHW 470
Score = 121 (47.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRAGSYGN-----ATTQEG--CRKCDCNSHGNS------ 121
VH + +C H+ T G +C+ C A Y N A Q+ C++CDCN H +
Sbjct: 275 VHEVCVCQ--HN-TAGPNCERC-APFYNNRPWRPAEDQDPHECQRCDCNGHSETCHFDPA 330
Query: 122 VLGVCDSITGE-CI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
V G C C+D+T+G+NCERC Y+ + G C+
Sbjct: 331 VFAASQGAHGGVCDNCRDHTEGRNCERCQLHYFRNRRPGAPIQETCI 377
Score = 53 (23.7 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT-CDLLLTGVHITHGRTLHYQVDLIRCTCRQ 373
+CVC P GP C ++ P+ H L G C+ H + G + +C CR+
Sbjct: 450 RCVCLPHVVGPKC-DQCAPH--HWKLASGRGCEPCACDPHNSLGPQCNQFTG--QCACRE 504
Score = 50 (22.7 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
C + E C + +C+C P TGP C +
Sbjct: 536 CDFRGTEGPGCDKASGRCLCRPGLTGPRCDQ 566
Score = 50 (22.7 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 13/43 (30%), Positives = 15/43 (34%)
Query: 304 KCPENRTCINNQCVCPPRRT-GPDCQEEICPNECHEFLNHGTC 345
K R C C C P + GP C + C E TC
Sbjct: 471 KLASGRGC--EPCACDPHNSLGPQCNQFTGQCACREGFGGLTC 511
Score = 50 (22.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 21/68 (30%), Positives = 22/68 (32%)
Query: 306 PENRTCINNQCVCPPRRT--GPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQ 363
P TCI C C P G C C E + CDL G T G T
Sbjct: 371 PIQETCI--PCECDPDGAVPGAPCDPLTGQCVCKEHVQGERCDLCKPG--FT-GLTFSNP 425
Query: 364 VDLIRCTC 371
RC C
Sbjct: 426 QGCHRCDC 433
>UNIPROTKB|F1P0Z5 [details] [associations]
symbol:Gga.39688 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005520 "insulin-like growth factor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000742
InterPro:IPR000867 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51323
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
GO:GO:0001558 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 OMA:QGAACDP EMBL:AADN02040897
EMBL:AADN02040898 EMBL:AADN02040899 EMBL:AADN02040900
EMBL:AADN02040901 IPI:IPI00584500 ProteinModelPortal:F1P0Z5
Ensembl:ENSGALT00000001544 Uniprot:F1P0Z5
Length = 1296
Score = 178 (67.7 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 40/119 (33%), Positives = 57/119 (47%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCR 111
C G+ G++C C C N + C H G C CH TG C + C G +G EGC
Sbjct: 783 CPDGFYGIECQHACNCQNGAHCDHITGQC-HCHPGWTGPRCAHACPQGRFG-----EGCS 836
Query: 112 K-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GYYGDPTDGGTCYYQCMAR 168
+ C C+++ CD ITG C+C G C++ P G+YG G C+ C+ +
Sbjct: 837 QVCSCSNNAT-----CDHITGRCLCTAGWMGPTCQQACPEGFYGT----G-CHQHCLCQ 885
Score = 169 (64.5 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 42/120 (35%), Positives = 53/120 (44%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C PP ++ CQ C GW G CS C N C G C WT D +
Sbjct: 640 GACVCPPGFTGSRCQDVCPPGWFGQSCS----CGNEGHCHPVTGTCSCAPGWTGHDCRRG 695
Query: 96 CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
C G +G GC C+C+S G CD++TG+C C G CE RC G++G
Sbjct: 696 CAVGRWG-----PGCANVCECSSS----TGSCDAVTGQCACDAGYTGSRCEERCPAGWFG 746
Score = 153 (58.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 38/123 (30%), Positives = 50/123 (40%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C Y+ C+ C GW G+ C C C + + C H G C W G C
Sbjct: 721 VTGQCACDAGYTGSRCEERCPAGWFGLGCRRRCQCEHGAMCDHVSGACTCAEGWR-GTFC 779
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GY 151
++ C G YG Q C C +H CD ITG+C C G C P G
Sbjct: 780 EHPCPDGFYG-IECQHACN-CQNGAH-------CDHITGQCHCHPGWTGPRCAHACPQGR 830
Query: 152 YGD 154
+G+
Sbjct: 831 FGE 833
Score = 153 (58.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 57/161 (35%), Positives = 68/161 (42%)
Query: 30 NASLCYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGI 80
+A C N C I G C P ++ C C G G CS C C+N++TC H G
Sbjct: 794 HACNCQNGAHCDHITGQCHCHPGWTGPRCAHACPQGRFGEGCSQVCSCSNNATCDHITGR 853
Query: 81 CDECHDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDN 138
C W G CQ C G YG GC + C C + G G CD TG CIC
Sbjct: 854 CLCTAGWM-GPTCQQACPEGFYGT-----GCHQHCLCQN-G----GTCDPTTGHCICPMG 902
Query: 139 TQGKNCE-RCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQG 178
G CE C G+ GD G C C+ G+ PQG
Sbjct: 903 WTGLACELACAEGH-GDGC-GQRC--ACLNGGVCD---PQG 936
Score = 152 (58.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 36/96 (37%), Positives = 45/96 (46%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY--CRAGSYGNATTQEGC 110
C G+ G DC +C C + + C G C C G CQ C G+YG EGC
Sbjct: 1210 CPPGFHGTDCQQHCDCAHGAACDPATGHC-HCPVGLRGHRCQEAGCEEGTYG-----EGC 1263
Query: 111 R-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
R +CDC GN+ CD ITG C+C G C+
Sbjct: 1264 RQRCDCV--GNAP---CDRITGHCLCPPGKTGPRCD 1294
Score = 148 (57.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 42/131 (32%), Positives = 54/131 (41%)
Query: 43 CKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
C+ P +S C C G G +CS CLC N TC G C C G HC+ C
Sbjct: 380 CECPAGWSGLLCNQTCPPGTFGKNCSQLCLCQNGGTCEPATGTC-RCPPGVAGIHCEDGC 438
Query: 97 RAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
G +G CRK C+C + G C I G C+C G+ C P + P
Sbjct: 439 PKGFFGKQ-----CRKKCNCANRGR-----CHRIYGACLCDPGLYGRYCHLACPKWAFGP 488
Query: 156 TDGGTCYYQCM 166
G C +C+
Sbjct: 489 ---G-CSEECL 495
Score = 142 (55.0 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 38/120 (31%), Positives = 51/120 (42%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C+ PP +S C+ C G G C+ C C + C H G C C TG C+
Sbjct: 936 GQCQCPPGWSGSSCESPCLPGAFGKSCAERCACPPGAPCDHITGQCS-CPPGFTGAACET 994
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
C G++G Q +C C C I+G C+C G +CE C G+YG
Sbjct: 995 PCPPGTFGERCAQ----RCRCVGPTQD----CHPISGVCVCAPGRHGPDCELECPVGWYG 1046
Score = 141 (54.7 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 39/122 (31%), Positives = 51/122 (41%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGIC-DECHDWTTGDHC- 93
G C P YS C+ CE G G C C C + C H G C EC G++C
Sbjct: 509 GSCSCKPGYSGVHCETKCEAGRYGEGCKKKCSCPPDARCDHITGRCWKECPQGYHGENCD 568
Query: 94 QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GY 151
Q C AG +G GC C C CD+++ C+C G +C + P G
Sbjct: 569 QECPAGRFG-----AGCLLLCSCGG------APCDAVSRRCVCAPGWTGHDCAQACPEGR 617
Query: 152 YG 153
+G
Sbjct: 618 WG 619
Score = 139 (54.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/127 (30%), Positives = 50/127 (39%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
C+ +C GY D +C G G C + C C + C C WT D
Sbjct: 554 CWKECPQGYHGENCDQ--ECPAGRFGAGCLLLCSCGG-APCDAVSRRCVCAPGWTGHDCA 610
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYY 152
Q C G +G QE C +C N G CD TG C+C G C+ C PG++
Sbjct: 611 QACPEGRWGLGC-QELCPECANN-------GSCDPATGACVCPPGFTGSRCQDVCPPGWF 662
Query: 153 GDPTDGG 159
G G
Sbjct: 663 GQSCSCG 669
Score = 126 (49.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 37/99 (37%), Positives = 47/99 (47%)
Query: 59 GVDCSVNCL-CNNHSTC-VHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDC 115
G DCS+ C C N TC V G G C EC +G C Q C G++G +Q C C
Sbjct: 357 GPDCSLTCEDCQNGGTCNVEGTG-C-ECPAGWSGLLCNQTCPPGTFGKNCSQ----LCLC 410
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ G G C+ TG C C G +CE C G++G
Sbjct: 411 QN-G----GTCEPATGTCRCPPGVAGIHCEDGCPKGFFG 444
Score = 126 (49.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 39/133 (29%), Positives = 52/133 (39%)
Query: 33 LCYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDE 83
LC N C G C+ PP + C+ C G+ G C C C N C G C
Sbjct: 409 LCQNGGTCEPATGTCRCPPGVAGIHCEDGCPKGFFGKQCRKKCNCANRGRCHRIYGAC-L 467
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C G +C C ++G ++E C C CD G C C+ G
Sbjct: 468 CDPGLYGRYCHLACPKWAFGPGCSEE----CLCVQPNTQH---CDKRDGSCSCKPGYSGV 520
Query: 143 NCE-RCLPGYYGD 154
+CE +C G YG+
Sbjct: 521 HCETKCEAGRYGE 533
Score = 117 (46.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 38/122 (31%), Positives = 50/122 (40%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDH 92
I G C PP ++ C+ C G G C+ C C + H I G+C C G
Sbjct: 977 ITGQCSCPPGFTGAACETPCPPGTFGERCAQRCRCVGPTQDCHPISGVC-VCAPGRHGPD 1035
Query: 93 CQY-CRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC----ER 146
C+ C G YG GC R C+C + C+ TG C C G +C +R
Sbjct: 1036 CELECPVGWYG-----PGCERPCECKNGAR-----CERTTGTCHCPAGYIGADCSIVPKR 1085
Query: 147 CL 148
CL
Sbjct: 1086 CL 1087
Score = 113 (44.8 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 39/128 (30%), Positives = 50/128 (39%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYG-------NA 104
C G G +CS CLC N TC G C C G HC+ C G +G N
Sbjct: 395 CPPGTFGKNCSQLCLCQNGGTCEPATGTC-RCPPGVAGIHCEDGCPKGFFGKQCRKKCNC 453
Query: 105 TTQEGCRK------CDCNSHGNSVLGVCDS------ITGECIC-QDNTQGKNCER----- 146
+ C + CD +G C + EC+C Q NTQ +C++
Sbjct: 454 ANRGRCHRIYGACLCDPGLYGRYCHLACPKWAFGPGCSEECLCVQPNTQ--HCDKRDGSC 511
Query: 147 -CLPGYYG 153
C PGY G
Sbjct: 512 SCKPGYSG 519
Score = 101 (40.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 39/134 (29%), Positives = 49/134 (36%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGC 110
+C GW G+ C C C + + C H G C W G C++ C G YG Q C
Sbjct: 739 RCPAGWFGLGCRRRCQCEHGAMCDHVSGACTCAEGWR-GTFCEHPCPDGFYG-IECQHAC 796
Query: 111 R-----KCD-----CNSH----GNSVLGVC-DSITGE-----CICQDNTQGKNCE-RCL- 148
CD C+ H G C GE C C +N + RCL
Sbjct: 797 NCQNGAHCDHITGQCHCHPGWTGPRCAHACPQGRFGEGCSQVCSCSNNATCDHITGRCLC 856
Query: 149 -PGYYGDPTDGGTC 161
G+ G PT C
Sbjct: 857 TAGWMG-PTCQQAC 869
Score = 83 (34.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
CP+ C N +C CVCPP TG CQ+ +CP
Sbjct: 626 CPE-CANNGSCDPATGACVCPPGFTGSRCQD-VCP 658
Score = 75 (31.5 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 300 SCPDKC--PENRTC--INNQCVCPPRRTGPDCQEEICP 333
SC ++C P C I QC CPP TG C E CP
Sbjct: 961 SCAERCACPPGAPCDHITGQCSCPPGFTGAAC-ETPCP 997
Score = 74 (31.1 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEE 330
C N C I C+CPP +TGP C E
Sbjct: 1269 CVGNAPCDRITGHCLCPPGKTGPRCDSE 1296
Score = 72 (30.4 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 301 CPDKCP---ENRTC--INNQCVCPPRRTGPDCQEEICP 333
C +C + C I+ CVC P R GPDC+ E CP
Sbjct: 1005 CAQRCRCVGPTQDCHPISGVCVCAPGRHGPDCELE-CP 1041
Score = 71 (30.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 36/123 (29%), Positives = 45/123 (36%)
Query: 273 EAKSGVMTIHYKQGKP-SEGFNATYQIFSCPD-----------KCPENRTC--INNQCVC 318
+ + G M H +EG+ T+ CPD C C I QC C
Sbjct: 754 QCEHGAMCDHVSGACTCAEGWRGTFCEHPCPDGFYGIECQHACNCQNGAHCDHITGQCHC 813
Query: 319 PPRRTGPDCQEEICPNE-----CHEFL---NHGTCDLLLTGVHITHGRTLHYQVDLIRCT 370
P TGP C CP C + N+ TCD HIT GR L + T
Sbjct: 814 HPGWTGPRCAHA-CPQGRFGEGCSQVCSCSNNATCD------HIT-GRCL-CTAGWMGPT 864
Query: 371 CRQ 373
C+Q
Sbjct: 865 CQQ 867
Score = 71 (30.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 312 INNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHGTCD 346
++ +CVC P TG DC + C C E N+G+CD
Sbjct: 594 VSRRCVCAPGWTGHDCAQACPEGRWGLGCQELCPECANNGSCD 636
Score = 58 (25.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 23/72 (31%), Positives = 27/72 (37%)
Query: 284 KQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQ-------EEICPN 334
+Q P EGF T C C TC C+CP TG C+ + C
Sbjct: 866 QQACP-EGFYGTGCHQHC--LCQNGGTCDPTTGHCICPMGWTGLACELACAEGHGDGCGQ 922
Query: 335 ECHEFLNHGTCD 346
C LN G CD
Sbjct: 923 RC-ACLNGGVCD 933
Score = 58 (25.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 318 CPPRRTGPDCQEE-IC--PNECHEFLNHGTCDLL--LTGVH 353
CP GP C EE +C PN H G+C +GVH
Sbjct: 481 CPKWAFGPGCSEECLCVQPNTQHCDKRDGSCSCKPGYSGVH 521
Score = 57 (25.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 303 DKCPENRTCINN-------QCVCPPRRTGPDCQEEICP 333
D C + C+N QC CPP +G C+ P
Sbjct: 918 DGCGQRCACLNGGVCDPQGQCQCPPGWSGSSCESPCLP 955
Score = 57 (25.1 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 19/62 (30%), Positives = 24/62 (38%)
Query: 300 SCPDKCPENRTC--INNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHGTCDLLL 349
SC C C + C C P TG DC+ C N C + G+CD +
Sbjct: 665 SC--SCGNEGHCHPVTGTCSCAPGWTGHDCRRGCAVGRWGPGCANVCECSSSTGSCDAV- 721
Query: 350 TG 351
TG
Sbjct: 722 TG 723
Score = 52 (23.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 13/40 (32%), Positives = 15/40 (37%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNEC-HE 338
P +C C C CP G DC I P C H+
Sbjct: 1052 PCECKNGARCERTTGTCHCPAGYIGADCS--IVPKRCLHD 1089
Score = 51 (23.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 318 CPPRRTGPDCQEEI-CPN--ECHEFLNHGTCDLLLTG 351
CPP G DCQ+ C + C H C + L G
Sbjct: 1210 CPPGFHGTDCQQHCDCAHGAACDPATGHCHCPVGLRG 1246
Score = 51 (23.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 312 INNQCVCPPRRTGPDCQEEICP 333
+ QC C TG C+E CP
Sbjct: 721 VTGQCACDAGYTGSRCEER-CP 741
Score = 49 (22.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEE----ICP 333
C CPE R + Q +CP C +CP
Sbjct: 609 CAQACPEGRWGLGCQELCPECANNGSCDPATGACVCP 645
Score = 48 (22.0 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 19/61 (31%), Positives = 20/61 (32%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP------------------NECHEFLNHGT 344
CP C I QC CPP TG C E CP +CH G
Sbjct: 968 CPPGAPCDHITGQCSCPPGFTGAAC-ETPCPPGTFGERCAQRCRCVGPTQDCHPI--SGV 1024
Query: 345 C 345
C
Sbjct: 1025 C 1025
Score = 46 (21.3 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 14/44 (31%), Positives = 15/44 (34%)
Query: 291 GFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEIC 332
GF+ T C C C C CP G CQE C
Sbjct: 1213 GFHGTDCQQHCD--CAHGAACDPATGHCHCPVGLRGHRCQEAGC 1254
Score = 40 (19.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDC 327
C +CP+ N CP R G C
Sbjct: 554 CWKECPQGYHGENCDQECPAGRFGAGC 580
Score = 40 (19.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 301 CPDKC----PENRTCI--NNQCVCPPRRTGPDCQ 328
C ++C P + C + C C P +G C+
Sbjct: 490 CSEECLCVQPNTQHCDKRDGSCSCKPGYSGVHCE 523
>UNIPROTKB|E2RQ32 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055001 "muscle cell development"
evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0043654 "recognition
of apoptotic cell" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AAEX03007755
ProteinModelPortal:E2RQ32 Ensembl:ENSCAFT00000000947 Uniprot:E2RQ32
Length = 1150
Score = 186 (70.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 34 CYNK--C-IY-GYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C+N C Y G CK P ++ C +C LG+ G DC++ C C N + C H G C C
Sbjct: 718 CHNGAFCSAYDGECKCTPGWTGLYCTQRCPLGFYGKDCALICQCQNGADCDHISGQCT-C 776
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G HC Q C AG+YG GCR+ CDC + NS CD ITG C C +G
Sbjct: 777 RTGFMGKHCEQKCPAGTYGY-----GCRQICDCLN--NST---CDHITGTCYCSPGWKGA 826
Query: 143 NCER 146
C++
Sbjct: 827 RCDQ 830
Score = 183 (69.5 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 50/144 (34%), Positives = 65/144 (45%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGIGICDE--- 83
C N + C P D SC C+ GW GVDCS++C CN C+HG G C+
Sbjct: 458 CKNDAV---CS-PVDGSCTCKAGWHGVDCSISCPSGTWGFSCNLTCQCLHG-GACNTQDG 512
Query: 84 ---CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C GD C+ C+ G+YG + +CDC SH + C S TG C C
Sbjct: 513 TCTCAPGWRGDKCELPCQDGTYGLNCAE----RCDC-SHADG----CHSTTGHCRCLPGW 563
Query: 140 QGKNCER-CLPGYYGDPTDGGTCY 162
G +C+ C G +G P CY
Sbjct: 564 SGVHCDSVCAEGRWG-PNCSLPCY 586
Score = 181 (68.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 50/152 (32%), Positives = 69/152 (45%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGIGICDE--- 83
C +KC++G C P +CQCE GW G +CS C C++ C +G +C+
Sbjct: 109 CADKCVHGRCIAPN--TCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNG-ALCNPITG 165
Query: 84 -CHDWT--TGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CH G C+ C G+YGN Q +C C + G CD +TGEC C
Sbjct: 166 ACHCAAGFRGWRCEDRCEQGTYGNDCHQ----RCQCQN-G----ATCDHVTGECRCPPGY 216
Query: 140 QGKNCER-CLPGYYGDPTD-------GGTCYY 163
G CE C PG +G + GG C++
Sbjct: 217 TGAFCEDLCPPGKHGPQCEQRCPCQNGGICHH 248
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 47/129 (36%), Positives = 60/129 (46%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSV---------NCL----CNNHSTCVHGIGICDECHDW 87
G C P D SCQC GW G DCS NC+ C+N + C G C +C
Sbjct: 679 GTCN-PIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGEC-KCTPG 736
Query: 88 TTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
TG +C Q C G YG + C C C + + CD I+G+C C+ GK+CE
Sbjct: 737 WTGLYCTQRCPLGFYG-----KDCALICQCQNGAD-----CDHISGQCTCRTGFMGKHCE 786
Query: 146 -RCLPGYYG 153
+C G YG
Sbjct: 787 QKCPAGTYG 795
Score = 162 (62.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 50/146 (34%), Positives = 63/146 (43%)
Query: 30 NASLCYNKCIYGYCK---GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC N I G C G + C+ CE G G DC C C N +TC H G C C
Sbjct: 156 NGALC-NP-ITGACHCAAGFRGWRCEDRCEQGTYGNDCHQRCQCQNGATCDHVTGEC-RC 212
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG C+ C G +G Q +C C + G G+C +TGEC C G
Sbjct: 213 PPGYTGAFCEDLCPPGKHGPQCEQ----RCPCQN-G----GICHHVTGECSCPSGWLGTV 263
Query: 144 C-ERCLPGYYGDPT-------DGGTC 161
C + C G +G +GGTC
Sbjct: 264 CGQPCPEGRFGKNCSQECQCHNGGTC 289
Score = 159 (61.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 42/136 (30%), Positives = 59/136 (43%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +C++ + G C P + C C G G +CS C C+N TC G C C
Sbjct: 242 NGGICHH--VTGECSCPSGWLGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATGQC-HC 298
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG+ CQ C G+YG + C C + G C ++G C+C+ G++
Sbjct: 299 SPGYTGERCQDECPVGTYGVRCAET----CQCVNGGK-----CYHVSGSCLCEAGFAGEH 349
Query: 144 CER--CLPGYYGDPTD 157
CE C G YG D
Sbjct: 350 CEARLCPEGLYGIKCD 365
Score = 153 (58.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 45/128 (35%), Positives = 57/128 (44%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
G+C+ P +S C C G G +CS+ C C N ++C GIC EC G CQ
Sbjct: 555 GHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGIC-ECAPGFRGTTCQR 613
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYG 153
C G YG+ +Q C +C H + G C ITG C C G C E C G +G
Sbjct: 614 ICSPGFYGHRCSQT-CPQC---VHSS---GPCHHITGLCDCLPGFTGALCNEVCPSGRFG 666
Query: 154 DPTDGGTC 161
G C
Sbjct: 667 KNC-AGVC 673
Score = 129 (50.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 40/119 (33%), Positives = 51/119 (42%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
C G+ KG D S C L G++CS C C N + C G C C G C C
Sbjct: 430 CAPGF-KGI-DCSIPCPLETYGINCSSLCGCKNDAVCSPVDGSCT-CKAGWHGVDCSISC 486
Query: 97 RAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+G++G + C C C HG G C++ G C C +G CE C G YG
Sbjct: 487 PSGTWGFS-----CNLTCQC-LHG----GACNTQDGTCTCAPGWRGDKCELPCQDGTYG 535
Score = 128 (50.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 48/149 (32%), Positives = 65/149 (43%)
Query: 30 NASL-CYNK----CIY--GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHST--CV 75
N SL CY K C G C+ P + +CQ C G+ G CS C HS+ C
Sbjct: 580 NCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCH 639
Query: 76 HGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGEC 133
H G+CD C TG C + C +G +G + C C C ++G C+ I C
Sbjct: 640 HITGLCD-CLPGFTGALCNEVCPSGRFG-----KNCAGVCTCTNNGT-----CNPIDRSC 688
Query: 134 ICQDNTQGKNCER-CLPGYYGDPTDGGTC 161
C G +C + C P ++G P TC
Sbjct: 689 QCYPGWIGSDCSQPCPPAHWG-PNCIHTC 716
Score = 126 (49.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 41/136 (30%), Positives = 60/136 (44%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ---CELGWTGVDCSVNCLC---NNHSTCVHGIGI 80
N CY+ + G C ++ C+ C G G+ C C C N HS C G
Sbjct: 328 NGGKCYH--VSGSCLCEAGFAGEHCEARLCPEGLYGIKCDKRCPCHLDNTHS-CHPMSGE 384
Query: 81 CDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDN 138
C C +G +C + C G +G E C++ C C++ + CDS+TG+CIC
Sbjct: 385 C-ACKPGWSGLYCNETCSPGFFG-----EACQQICSCHNGAD-----CDSVTGKCICAPG 433
Query: 139 TQGKNCE-RCLPGYYG 153
+G +C C YG
Sbjct: 434 FKGIDCSIPCPLETYG 449
Score = 123 (48.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 28 IFNASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICD 82
+ ++ C++ I G C P ++ C C G G +C+ C C N+ TC + I
Sbjct: 632 VHSSGPCHH--ITGLCDCLPGFTGALCNEVCPSGRFGKNCAGVCTCTNNGTC-NPIDRSC 688
Query: 83 ECHD-WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
+C+ W D Q C +G C CN H + C + GEC C G
Sbjct: 689 QCYPGWIGSDCSQPCPPAHWG-----PNCIHT-CNCHNGAF---CSAYDGECKCTPGWTG 739
Query: 142 KNC-ERCLPGYYG 153
C +RC G+YG
Sbjct: 740 LYCTQRCPLGFYG 752
Score = 119 (46.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 36/120 (30%), Positives = 47/120 (39%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ-YCRAGSYGNATTQE-G 109
+CE G G DC C C N +TC H G C C TG C+ C G +G Q
Sbjct: 181 RCEQGTYGNDCHQRCQCQNGATCDHVTGEC-RCPPGYTGAFCEDLCPPGKHGPQCEQRCP 239
Query: 110 CRKCDCNSH--GNSVL--GVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
C+ H G G ++ G+ C + GKNC + + G D T C
Sbjct: 240 CQNGGICHHVTGECSCPSGWLGTVCGQP-CPEGRFGKNCSQECQCHNGGTCDAATGQCHC 298
Score = 70 (29.7 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRT 359
CP R G +C +E C +CH N GTCD H + G T
Sbjct: 268 CPEGRFGKNCSQE-C--QCH---NGGTCDAATGQCHCSPGYT 303
Score = 66 (28.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C TC QC C P TG CQ+E CP
Sbjct: 282 QCHNGGTCDAATGQCHCSPGYTGERCQDE-CP 312
Score = 61 (26.5 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 15/66 (22%), Positives = 24/66 (36%)
Query: 295 TYQIFSCPD--KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLT 350
TY + C + +C C ++ C+C G C+ +CP + C L
Sbjct: 315 TYGV-RCAETCQCVNGGKCYHVSGSCLCEAGFAGEHCEARLCPEGLYGIKCDKRCPCHLD 373
Query: 351 GVHITH 356
H H
Sbjct: 374 NTHSCH 379
Score = 58 (25.5 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNE-----CHEF---LNHGTCDLLLTG 351
+C C I+ QC C G C+++ CP C + LN+ TCD + TG
Sbjct: 760 QCQNGADCDHISGQCTCRTGFMGKHCEQK-CPAGTYGYGCRQICDCLNNSTCDHI-TG 815
Score = 57 (25.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 289 SEGF--NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECH 337
S GF A QI SC + + + +C+C P G DC CP E +
Sbjct: 401 SPGFFGEACQQICSCHNGA--DCDSVTGKCICAPGFKGIDCSIP-CPLETY 448
Score = 56 (24.8 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 21/68 (30%), Positives = 27/68 (39%)
Query: 289 SEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEFL- 340
S GF +CP + C I C C P TG C E +CP+ C
Sbjct: 616 SPGFYGHRCSQTCPQCVHSSGPCHHITGLCDCLPGFTGALCNE-VCPSGRFGKNCAGVCT 674
Query: 341 --NHGTCD 346
N+GTC+
Sbjct: 675 CTNNGTCN 682
Score = 55 (24.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCP--ENRTC--INNQCVCPPRRTGPDCQE 329
++G M H +Q P+ TY + C C N TC I C C P G C +
Sbjct: 777 RTGFMGKHCEQKCPA----GTYG-YGCRQICDCLNNSTCDHITGTCYCSPGWKGARCDQ 830
Score = 54 (24.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 306 PENRTC------INNQCV--CPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVHI 354
P +R+C I + C CPP GP+C C N C + C TG++
Sbjct: 683 PIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGECKCTPGWTGLYC 742
Query: 355 THGRTL-HYQVDL-IRCTCR 372
T L Y D + C C+
Sbjct: 743 TQRCPLGFYGKDCALICQCQ 762
Score = 52 (23.4 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 301 CPDKCP---EN-RTC--INNQCVCPPRRTGPDCQEEICP 333
C +CP +N +C ++ +C C P +G C E P
Sbjct: 364 CDKRCPCHLDNTHSCHPMSGECACKPGWSGLYCNETCSP 402
Score = 46 (21.3 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 300 SCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEIC 332
S P C +C + C C P G CQ IC
Sbjct: 582 SLPCYCKNGASCSPDDGICECAPGFRGTTCQR-IC 615
Score = 41 (19.5 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNECHEFLNHGTCD 346
+C + ++ VC R GP+C C N + G C+
Sbjct: 558 RCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICE 601
>UNIPROTKB|Q29116 [details] [associations]
symbol:TNC "Tenascin" species:9823 "Sus scrofa" [GO:0031012
"extracellular matrix" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060 SMART:SM00181
INTERPRO:IPR002181 GO:GO:0007165 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 InterPro:IPR013111 Pfam:PF07974
Pfam:PF12661 HOVERGEN:HBG008949 OrthoDB:EOG4MSCX9 CTD:3371
KO:K06252 HOGENOM:HOG000234355 EMBL:X61599 PIR:S19694
RefSeq:NP_999395.1 UniGene:Ssc.16209 ProteinModelPortal:Q29116
SMR:Q29116 STRING:Q29116 GeneID:397460 KEGG:ssc:397460
Uniprot:Q29116
Length = 1746
Score = 152 (58.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 68/230 (29%), Positives = 103/230 (44%)
Query: 34 CYNKCI-YGYC-KGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWT 88
C N C G C +G C+CE G+ G DCS ++C C+ H CV+G+ +CD D
Sbjct: 439 CPNDCHGRGRCVQG----RCECEHGFQGYDCSEMSCPHDCHQHGRCVNGMCVCD---DGY 491
Query: 89 TGDHCQYCRAGSYGNATTQEGC--RKCDCNSHG----NSVLGVCDS--------ITGECI 134
TG+ C+ R G+ + + C +C C HG + C S + G+C+
Sbjct: 492 TGEDCRELRCP--GDCSQRGRCVDGRCVCE-HGFAGPDCADLACPSDCHGRGRCVNGQCV 548
Query: 135 CQDNTQGKNC-ERCLPGYYGDPTDGGTCYY-QCMARGMLTGPGPQGLGSGLAERNAWEGK 192
C + GK+C +R PG D G C QC+ TG G S + + W G+
Sbjct: 549 CHEGFTGKDCGQRRCPG---DCHGQGRCVDGQCVCHEGFTGLDC-GQRSCPNDCSNW-GQ 603
Query: 193 DTPSRECLWIIGQSLD--SNSTAPADIILLRLQPD-INVPC-NENAVYIY 238
R C+ G S + S + P D+I+ + + +N+ NE V Y
Sbjct: 604 CVSGR-CICNEGYSGEDCSQVSPPKDLIVTEVTEETVNLAWDNEMRVTEY 652
Score = 145 (56.1 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 48/160 (30%), Positives = 70/160 (43%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTTG 90
C+N+ G C D C+C+ G+ G DC + C C+ H CV+G +CDE TG
Sbjct: 381 CHNR---GRCL---DGRCECDDGFEGEDCGELRCPGGCSGHGRCVNGQCVCDEGR---TG 431
Query: 91 DHCQYCRAGS--YGNATTQEGCRKC-------DCNS----HGNSVLGVCDSITGECICQD 137
+ C R + +G +G +C DC+ H G C + G C+C D
Sbjct: 432 EDCSQLRCPNDCHGRGRCVQGRCECEHGFQGYDCSEMSCPHDCHQHGRC--VNGMCVCDD 489
Query: 138 NTQGKNCE--RCLPGYYGDPTDGGTCYY-QCMARGMLTGP 174
G++C RC PG D + G C +C+ GP
Sbjct: 490 GYTGEDCRELRC-PG---DCSQRGRCVDGRCVCEHGFAGP 525
Score = 126 (49.4 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C + C+N QCVC RTG DC + CPN+CH G C
Sbjct: 408 CPGGCSGHGRCVNGQCVCDEGRTGEDCSQLRCPNDCH---GRGRC 449
Score = 114 (45.2 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 44/149 (29%), Positives = 60/149 (40%)
Query: 42 YCKGPPDYS-----CQCELGWTGVDCSV-NCLCNNH--STCVHGIGICDECHDWTTGDHC 93
+C G ++S C CE GW G +CS C N H CV G +C+E TG+ C
Sbjct: 160 FCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPSNCHLRGQCVDGQCVCNEGF---TGEDC 216
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG----EC---ICQ---DNTQGKN 143
+Q C DCN G V GVC G +C C G+
Sbjct: 217 ------------SQLACPS-DCNDQGKCVNGVCVCFEGYSGVDCSRETCPVPCSEEHGRC 263
Query: 144 CE-RCL--PGYYGDPTDGGTCYYQCMARG 169
+ RC+ G+ G+ + C + C RG
Sbjct: 264 VDGRCVCQEGFAGEDCNEPLCLHNCHGRG 292
Score = 113 (44.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+CP C C+N QCVC TG DC + CP +CH G C
Sbjct: 531 ACPSDCHGRGRCVNGQCVCHEGFTGKDCGQRRCPGDCH---GQGRC 573
Score = 113 (44.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SCP C ++ C+N CVC TG DC+E CP +C + G C
Sbjct: 469 SCPHDCHQHGRCVNGMCVCDDGYTGEDCRELRCPGDCSQ---RGRC 511
Score = 113 (44.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 43/142 (30%), Positives = 57/142 (40%)
Query: 38 CIYGYCKGP---PDYSCQCELGWTGVDCSVN-CL--CNNHSTCVHGIGICDECHDWTTGD 91
C +G C+G + C C+ G+ G DCS C C+N C+ G C EC D G+
Sbjct: 346 CPHG-CRGRGRCEEGQCVCDEGFAGADCSERRCPSDCHNRGRCLDGR--C-ECDDGFEGE 401
Query: 92 HCQY--CRAGSYGNATTQEGCRKCDCNSHGN--SVLGVCDSITGECICQDNTQGKNCERC 147
C C G G+ G CD G S L + G C QG+ CE C
Sbjct: 402 DCGELRCPGGCSGHGRCVNGQCVCDEGRTGEDCSQLRCPNDCHGRGRC---VQGR-CE-C 456
Query: 148 LPGYYGDPTDGGTCYYQCMARG 169
G+ G +C + C G
Sbjct: 457 EHGFQGYDCSEMSCPHDCHQHG 478
Score = 111 (44.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C + C++ +CVC GPDC + CP++CH G C
Sbjct: 501 CPGDCSQRGRCVDGRCVCEHGFAGPDCADLACPSDCH---GRGRC 542
Score = 107 (42.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 19/46 (41%), Positives = 22/46 (47%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+CP C C QCVC G DC E CP++CH N G C
Sbjct: 345 ACPHGCRGRGRCEEGQCVCDEGFAGADCSERRCPSDCH---NRGRC 387
Score = 106 (42.4 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C C++ QCVC TG DC + CPN+C N G C
Sbjct: 563 CPGDCHGQGRCVDGQCVCHEGFTGLDCGQRSCPNDCS---NWGQC 604
Score = 104 (41.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP+ C C+ +C C G DC E CP++CH+ HG C
Sbjct: 439 CPNDCHGRGRCVQGRCECEHGFQGYDCSEMSCPHDCHQ---HGRC 480
Score = 103 (41.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHE---FLNHGTC 345
C C C+ N+CVC TG DC E ICP +C + +N GTC
Sbjct: 284 CLHNCHGRGRCVENECVCDEGFTGEDCGELICPKDCFDRGRCIN-GTC 330
Score = 99 (39.9 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 29/114 (25%), Positives = 45/114 (39%)
Query: 50 SCQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTTGDHC--QYCRAGSYGNA 104
+C C+ G+ G DC + C C C G +CDE G C + C + +
Sbjct: 329 TCYCDEGFEGEDCGRLACPHGCRGRGRCEEGQCVCDEGF---AGADCSERRCPSDCHNRG 385
Query: 105 TTQEGCRKCDCNSHGNSV-----LGVCDS----ITGECICQDNTQGKNCE--RC 147
+G +CD G G C + G+C+C + G++C RC
Sbjct: 386 RCLDGRCECDDGFEGEDCGELRCPGGCSGHGRCVNGQCVCDEGRTGEDCSQLRC 439
Score = 96 (38.9 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 38/130 (29%), Positives = 50/130 (38%)
Query: 51 CQCELGWTGVDCS-VNCL--CNN-HSTCVHGIGICDECHDWTTGDHCQ--YCRAGSYGNA 104
C C G++GVDCS C C+ H CV G +C E G+ C C +G
Sbjct: 236 CVCFEGYSGVDCSRETCPVPCSEEHGRCVDGRCVCQEGF---AGEDCNEPLCLHNCHGRG 292
Query: 105 TTQEGCRKCDCNSHGNSVLG--VCDS--------ITGECICQDNTQGKNCER--CLPGYY 152
E CD G G +C I G C C + +G++C R C G
Sbjct: 293 RCVENECVCDEGFTGEDC-GELICPKDCFDRGRCINGTCYCDEGFEGEDCGRLACPHGCR 351
Query: 153 G-DPTDGGTC 161
G + G C
Sbjct: 352 GRGRCEEGQC 361
Score = 90 (36.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 20/57 (35%), Positives = 23/57 (40%)
Query: 290 EGF-NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
EGF A CP C C++ +C C G DC E CP C HG C
Sbjct: 365 EGFAGADCSERRCPSDCHNRGRCLDGRCECDDGFEGEDCGELRCPGGCS---GHGRC 418
Score = 86 (35.3 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 16/46 (34%), Positives = 19/46 (41%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP C + CIN C C G DC CP+ C G C+
Sbjct: 315 CPKDCFDRGRCINGTCYCDEGFEGEDCGRLACPHGCR---GRGRCE 357
Score = 74 (31.1 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNE 335
SCP+ C C++ +C+C +G DC + P +
Sbjct: 593 SCPNDCSNWGQCVSGRCICNEGYSGEDCSQVSPPKD 628
>UNIPROTKB|F1MET4 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 GO:GO:0055001 GO:GO:0034109 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654
GO:GO:0051147 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:DAAA02019789 EMBL:DAAA02019790 EMBL:DAAA02019791
EMBL:DAAA02019792 IPI:IPI00742600 UniGene:Bt.64852
Ensembl:ENSBTAT00000000434 NextBio:20877803 ArrayExpress:F1MET4
Uniprot:F1MET4
Length = 1136
Score = 186 (70.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 34 CYNK--C-IY-GYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C+N C Y G CK P ++ C +C LG+ G DC++ C C N + C H G C C
Sbjct: 718 CHNGAFCSAYDGECKCTPGWTGLYCTQRCPLGFYGKDCALVCQCQNGADCDHISGQCT-C 776
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G HC Q C AG+YG GCR+ CDC + NS CD ITG C C +G
Sbjct: 777 RTGFMGKHCEQKCPAGTYGY-----GCRQICDCLN--NST---CDHITGTCYCSPGWKGA 826
Query: 143 NCER 146
C++
Sbjct: 827 RCDQ 830
Score = 184 (69.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 62/200 (31%), Positives = 89/200 (44%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGIGICDE--- 83
C +KC++G C P +CQCE GW G +CS C C++ C +G +C+
Sbjct: 109 CADKCVHGRCIAPN--TCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNG-ALCNPITG 165
Query: 84 -CHDWT--TGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
CH G C+ C G+YGN Q +C C + G CD +TGEC C
Sbjct: 166 ACHCAAGFRGWRCEERCEQGTYGNDCHQ----RCQCQN-G----ATCDHVTGECRCPPGY 216
Query: 140 QGKNCER-CLPGYYGDPTD-------GGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEG 191
G CE C PG +G + GG C++ G + P P LG+ + + EG
Sbjct: 217 TGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHH---VTGECSCP-PGWLGT-VCGQPCPEG 271
Query: 192 K--DTPSRECLWIIGQSLDS 209
+ S+EC G + D+
Sbjct: 272 RFGKNCSQECQCHNGGTCDA 291
Score = 177 (67.4 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 43/122 (35%), Positives = 57/122 (46%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
G C P Y+ CQ C +G GV C+ C C N C H G C C +GD C+
Sbjct: 294 GQCHCSPGYTGERCQDECPVGTYGVHCAETCQCINGGKCYHVSGSC-LCEAGFSGDRCEA 352
Query: 95 -YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYY 152
C G YG ++C C H ++ L C ++GEC C+ G C E C PG+Y
Sbjct: 353 RLCPEGLYGIRCD----KRCPC--HVDNTLS-CHPMSGECACKPGWSGLYCNETCSPGFY 405
Query: 153 GD 154
G+
Sbjct: 406 GE 407
Score = 166 (63.5 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 46/128 (35%), Positives = 60/128 (46%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSV---------NCL----CNNHSTCVHGIGICDECHDW 87
G C P D SCQC GW G DCS NC+ C+N + C G C +C
Sbjct: 679 GTCN-PIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGEC-KCTPG 736
Query: 88 TTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE- 145
TG +C Q C G YG ++ C C + + CD I+G+C C+ GK+CE
Sbjct: 737 WTGLYCTQRCPLGFYG----KDCALVCQCQNGAD-----CDHISGQCTCRTGFMGKHCEQ 787
Query: 146 RCLPGYYG 153
+C G YG
Sbjct: 788 KCPAGTYG 795
Score = 162 (62.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 51/146 (34%), Positives = 63/146 (43%)
Query: 30 NASLCYNKCIYGYCK---GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC N I G C G + C+ CE G G DC C C N +TC H G C C
Sbjct: 156 NGALC-NP-ITGACHCAAGFRGWRCEERCEQGTYGNDCHQRCQCQNGATCDHVTGEC-RC 212
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG C+ C G +G Q +C C + G GVC +TGEC C G
Sbjct: 213 PPGYTGAFCEDLCPPGKHGPQCEQ----RCPCQN-G----GVCHHVTGECSCPPGWLGTV 263
Query: 144 C-ERCLPGYYGDPT-------DGGTC 161
C + C G +G +GGTC
Sbjct: 264 CGQPCPEGRFGKNCSQECQCHNGGTC 289
Score = 162 (62.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 42/132 (31%), Positives = 57/132 (43%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +C++ + G C PP + C C G G +CS C C+N TC G C C
Sbjct: 242 NGGVCHH--VTGECSCPPGWLGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATGQC-HC 298
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG+ CQ C G+YG + C C + G C ++G C+C+ G
Sbjct: 299 SPGYTGERCQDECPVGTYGVHCAET----CQCINGGK-----CYHVSGSCLCEAGFSGDR 349
Query: 144 CER--CLPGYYG 153
CE C G YG
Sbjct: 350 CEARLCPEGLYG 361
Score = 153 (58.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 46/129 (35%), Positives = 58/129 (44%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
G+C+ P +S C C G G +CS+ C C N ++C GIC EC G CQ
Sbjct: 555 GHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGIC-ECAPGFRGTTCQR 613
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYG 153
C G YG+ +Q C +C H + G C ITG C C G C E C G +G
Sbjct: 614 ICSPGFYGHRCSQT-CPQC---VHSS---GPCHHITGLCDCLPGFTGALCNEVCPSGRFG 666
Query: 154 DPTDG-GTC 161
G TC
Sbjct: 667 KNCAGICTC 675
Score = 146 (56.5 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 41/119 (34%), Positives = 55/119 (46%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
C G+ KG D S C LG G++CS C C N + C G C C+ G C C
Sbjct: 430 CAPGF-KGI-DCSIPCPLGTYGINCSSLCSCKNDAVCSPVDGSCT-CNAGWHGVDCSISC 486
Query: 97 RAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
+G++G GC C C +G G C+++ G C C +G+ CE C G YG
Sbjct: 487 PSGTWGF-----GCNLTCQC-LNG----GACNTLDGTCTCAPGWRGEKCEFPCQDGTYG 535
Score = 136 (52.9 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 42/135 (31%), Positives = 60/135 (44%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ---CELGWTGVDCSVNCLCN--NHSTCVHGIGIC 81
N CY+ + G C +S C+ C G G+ C C C+ N +C G C
Sbjct: 328 NGGKCYH--VSGSCLCEAGFSGDRCEARLCPEGLYGIRCDKRCPCHVDNTLSCHPMSGEC 385
Query: 82 DECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNT 139
C +G +C + C G YG E C++ C C + + CDS+TG+CIC
Sbjct: 386 -ACKPGWSGLYCNETCSPGFYG-----EACQQICSCQNGAD-----CDSVTGKCICAPGF 434
Query: 140 QGKNCE-RCLPGYYG 153
+G +C C G YG
Sbjct: 435 KGIDCSIPCPLGTYG 449
Score = 129 (50.5 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 44/142 (30%), Positives = 56/142 (39%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTT 89
+C+ G D +C C GW G C C C C H D CH TT
Sbjct: 500 QCLNGGACNTLDGTCTCAPGWRGEKCEFPCQDGTYGLNCAERCDCSHA----DGCHS-TT 554
Query: 90 GDHCQYCRAGSYG---NATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCE 145
G HC+ C G G ++ EG +C+ G C G C C +G C+
Sbjct: 555 G-HCR-CLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 612
Query: 146 R-CLPGYYGDPTDGGTCYYQCM 166
R C PG+YG TC QC+
Sbjct: 613 RICSPGFYGHRCSQ-TCP-QCV 632
Score = 128 (50.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 48/149 (32%), Positives = 65/149 (43%)
Query: 30 NASL-CYNK----CIY--GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHST--CV 75
N SL CY K C G C+ P + +CQ C G+ G CS C HS+ C
Sbjct: 580 NCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCH 639
Query: 76 HGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGEC 133
H G+CD C TG C + C +G +G + C C C ++G C+ I C
Sbjct: 640 HITGLCD-CLPGFTGALCNEVCPSGRFG-----KNCAGICTCTNNGT-----CNPIDRSC 688
Query: 134 ICQDNTQGKNCER-CLPGYYGDPTDGGTC 161
C G +C + C P ++G P TC
Sbjct: 689 QCYPGWIGSDCSQPCPPAHWG-PNCIHTC 716
Score = 123 (48.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 28 IFNASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICD 82
+ ++ C++ I G C P ++ C C G G +C+ C C N+ TC + I
Sbjct: 632 VHSSGPCHH--ITGLCDCLPGFTGALCNEVCPSGRFGKNCAGICTCTNNGTC-NPIDRSC 688
Query: 83 ECHD-WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
+C+ W D Q C +G C CN H + C + GEC C G
Sbjct: 689 QCYPGWIGSDCSQPCPPAHWG-----PNCIHT-CNCHNGAF---CSAYDGECKCTPGWTG 739
Query: 142 KNC-ERCLPGYYG 153
C +RC G+YG
Sbjct: 740 LYCTQRCPLGFYG 752
Score = 119 (46.9 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 36/120 (30%), Positives = 47/120 (39%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ-YCRAGSYGNATTQE-G 109
+CE G G DC C C N +TC H G C C TG C+ C G +G Q
Sbjct: 181 RCEQGTYGNDCHQRCQCQNGATCDHVTGEC-RCPPGYTGAFCEDLCPPGKHGPQCEQRCP 239
Query: 110 CRKCDCNSH--GNSVL--GVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
C+ H G G ++ G+ C + GKNC + + G D T C
Sbjct: 240 CQNGGVCHHVTGECSCPPGWLGTVCGQP-CPEGRFGKNCSQECQCHNGGTCDAATGQCHC 298
Score = 66 (28.3 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C TC QC C P TG CQ+E CP
Sbjct: 282 QCHNGGTCDAATGQCHCSPGYTGERCQDE-CP 312
Score = 58 (25.5 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNE-----CHEF---LNHGTCDLLLTG 351
+C C I+ QC C G C+++ CP C + LN+ TCD + TG
Sbjct: 760 QCQNGADCDHISGQCTCRTGFMGKHCEQK-CPAGTYGYGCRQICDCLNNSTCDHI-TG 815
Score = 57 (25.1 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 21/68 (30%), Positives = 27/68 (39%)
Query: 289 SEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEFL- 340
S GF +CP + C I C C P TG C E +CP+ C
Sbjct: 616 SPGFYGHRCSQTCPQCVHSSGPCHHITGLCDCLPGFTGALCNE-VCPSGRFGKNCAGICT 674
Query: 341 --NHGTCD 346
N+GTC+
Sbjct: 675 CTNNGTCN 682
Score = 55 (24.4 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 289 SEGF--NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICP 333
S GF A QI SC + + + +C+C P G DC CP
Sbjct: 401 SPGFYGEACQQICSCQNGA--DCDSVTGKCICAPGFKGIDCSIP-CP 444
Score = 55 (24.4 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCP--ENRTC--INNQCVCPPRRTGPDCQE 329
++G M H +Q P+ TY + C C N TC I C C P G C +
Sbjct: 777 RTGFMGKHCEQKCPA----GTYG-YGCRQICDCLNNSTCDHITGTCYCSPGWKGARCDQ 830
Score = 55 (24.4 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 26/91 (28%), Positives = 37/91 (40%)
Query: 298 IFSCPDK--C-PENRTC------INNQCV--CPPRRTGPDCQEEI-CPNE--CHEFLNHG 343
I +C + C P +R+C I + C CPP GP+C C N C +
Sbjct: 672 ICTCTNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGEC 731
Query: 344 TCDLLLTGVHITHGRTL-HYQVDL-IRCTCR 372
C TG++ T L Y D + C C+
Sbjct: 732 KCTPGWTGLYCTQRCPLGFYGKDCALVCQCQ 762
Score = 52 (23.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 295 TYQIFSCPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEICP 333
TY + C + C C ++ C+C +G C+ +CP
Sbjct: 315 TYGVH-CAETCQCINGGKCYHVSGSCLCEAGFSGDRCEARLCP 356
Score = 51 (23.0 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 301 CPDKCP---ENR-TC--INNQCVCPPRRTGPDCQEEICP 333
C +CP +N +C ++ +C C P +G C E P
Sbjct: 364 CDKRCPCHVDNTLSCHPMSGECACKPGWSGLYCNETCSP 402
Score = 46 (21.3 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 300 SCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEIC 332
S P C +C + C C P G CQ IC
Sbjct: 582 SLPCYCKNGASCSPDDGICECAPGFRGTTCQR-IC 615
Score = 42 (19.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 15/57 (26%), Positives = 20/57 (35%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLL-LTGVHITHG 357
+C C ++ C C P G C E C + + CD G H T G
Sbjct: 500 QCLNGGACNTLDGTCTCAPGWRGEKC-EFPCQDGTYGLNCAERCDCSHADGCHSTTG 555
Score = 41 (19.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNECHEFLNHGTCD 346
+C + ++ VC R GP+C C N + G C+
Sbjct: 558 RCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICE 601
>UNIPROTKB|E1BWU4 [details] [associations]
symbol:E1BWU4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:YCECFGH EMBL:AADN02033768 EMBL:AADN02033769 EMBL:AADN02033770
EMBL:AADN02033771 EMBL:AADN02033772 IPI:IPI00587584
ProteinModelPortal:E1BWU4 Ensembl:ENSGALT00000002932 Uniprot:E1BWU4
Length = 541
Score = 160 (61.4 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 37/96 (38%), Positives = 47/96 (48%)
Query: 65 NCLCNNHST-CVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EG-CRKCDC 115
NC C HS C + IC C T G HC+ CR G + NA+ + E C C C
Sbjct: 365 NCECFGHSNRCSYIELLNTVICVSCKHNTRGQHCELCRLGYFRNASAELDDENVCIDCYC 424
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
N G SV C+ G C C++ G C++CLPGY
Sbjct: 425 NPFG-SVHDRCND-RGFCECKEGASGPKCDKCLPGY 458
Score = 101 (40.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 51 CQCELGWTGV-DCSVNCLCN-NHSTCVHGIGICDECHD---WTTGDHCQYCRAGSYGNAT 105
C+C L TG + + LC H+T G C + + W+ G + + +
Sbjct: 299 CKCNLHATGCKEENKRLLCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANICIP 358
Query: 106 TQEGCRKCDCNSHGN--SVLGVCDSITGECI-CQDNTQGKNCERCLPGYY 152
+ C+C H N S + + +++ C+ C+ NT+G++CE C GY+
Sbjct: 359 SISSIGNCECFGHSNRCSYIELLNTVI--CVSCKHNTRGQHCELCRLGYF 406
Score = 83 (34.3 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 21/52 (40%), Positives = 25/52 (48%)
Query: 305 CPENRTCINN-QCVCPPRRTGPDCQEEIC---PNECHEFLNHGT---CDLLL 349
C TCINN +C CPP TG C++ C P C + G C LLL
Sbjct: 477 CQNGGTCINNVRCQCPPAYTGILCEKLKCERDPGGCSQSSAQGAMSHCPLLL 528
Score = 79 (32.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGT 160
G +C CN H + C C+ NT G +C +C Y G P G+
Sbjct: 295 GRNRCKCNLHATGCKEENKRLL--CECEHNTTGPDCGKCKKNYQGRPWSPGS 344
Score = 51 (23.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 327 CQEEICPNECHEFLNHGTC 345
CQ +C NE N GTC
Sbjct: 465 CQPNVCDNELLHCQNGGTC 483
>RGD|1306311 [details] [associations]
symbol:Lamb1 "laminin, beta 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005178 "integrin
binding" evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005605 "basal lamina" evidence=ISO] [GO:0005606 "laminin-1
complex" evidence=ISO] [GO:0005607 "laminin-2 complex"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007162 "negative regulation of cell adhesion" evidence=ISO]
[GO:0007566 "embryo implantation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016477 "cell migration"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0043208
"glycosphingolipid binding" evidence=ISO] [GO:0043256 "laminin
complex" evidence=ISO] [GO:0043257 "laminin-8 complex"
evidence=ISO] [GO:0043259 "laminin-10 complex" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0070062 "extracellular vesicular exosome" evidence=ISO]
RGD:1306311 GO:GO:0048471 GO:GO:0005615 GO:GO:0016477 GO:GO:0007162
GO:GO:0030335 GO:GO:0031012 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 OrthoDB:EOG44BB1B GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 IPI:IPI00365542
Ensembl:ENSRNOT00000008321 UCSC:RGD:1306311 ArrayExpress:D3ZQN7
Uniprot:D3ZQN7
Length = 1834
Score = 211 (79.3 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 47/124 (37%), Positives = 59/124 (47%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
S C + C GY P D+ C+ C N + C G C +C T GD
Sbjct: 1001 SRC-DGCASGYFGNPSDFGGSCQ----PCQCHHNIDTTDPEACDKETGRCLKCLYHTEGD 1055
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCN------SHGNSVLGVCDSITGECICQDNTQGKNCE 145
HCQ+C+ G YG+A Q+ CRKC CN H N CD TG+C C N G+NC+
Sbjct: 1056 HCQFCQHGYYGDALRQD-CRKCVCNYLGTVREHCNGSDCHCDKTTGQCSCLPNVIGQNCD 1114
Query: 146 RCLP 149
RC P
Sbjct: 1115 RCAP 1118
Score = 200 (75.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 47/132 (35%), Positives = 63/132 (47%)
Query: 49 YSCQCEL---GWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNA 104
Y+ QC+ G+ G C CN H+ C G C C D+TTG +C+ C AG YG+
Sbjct: 895 YARQCDRCLPGFWGFPSCQPCQCNGHAEDCDTVTGECLSCQDYTTGHNCERCLAGYYGDP 954
Query: 105 TTQEG--CRKCDCNS---HGNSVLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGDP 155
G CR C C G C D +T + C+C G C+ C GY+G+P
Sbjct: 955 IIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDGCASGYFGNP 1014
Query: 156 TD-GGTCY-YQC 165
+D GG+C QC
Sbjct: 1015 SDFGGSCQPCQC 1026
Score = 182 (69.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 48/131 (36%), Positives = 56/131 (42%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECH---------DWTTGDHCQYC 96
P CQC G C+ C +G CD CH D TG C +C
Sbjct: 835 PNGGQCQCRPNVVGRTCN-RCAPGTFGFGPNGCKPCD-CHLQGSVSAFCDAVTGQ-C-HC 890
Query: 97 RAGSYGNATTQ--------EGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERC 147
G Y + C+ C CN H CD++TGEC+ CQD T G NCERC
Sbjct: 891 FQGIYARQCDRCLPGFWGFPSCQPCQCNGHAED----CDTVTGECLSCQDYTTGHNCERC 946
Query: 148 LPGYYGDPTDG 158
L GYYGDP G
Sbjct: 947 LAGYYGDPIIG 957
Score = 177 (67.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 35/108 (32%), Positives = 53/108 (49%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+S + G+ C + + S C G C +C G C C G++G
Sbjct: 808 FSISALIHQAGLACECDPQGSLSSVCDPNGGQC-QCRPNVVGRTCNRCAPGTFGFGPN-- 864
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
GC+ CDC+ G SV CD++TG+C C + C+RCLPG++G P+
Sbjct: 865 GCKPCDCHLQG-SVSAFCDAVTGQCHCFQGIYARQCDRCLPGFWGFPS 911
Score = 163 (62.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 47/150 (31%), Positives = 65/150 (43%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQ-CEL----GW---TGVDCSVNCLCNN-HS---TCVHG 77
N S C+ G C P+ Q C+ W +G C C CN HS +C
Sbjct: 1089 NGSDCHCDKTTGQCSCLPNVIGQNCDRCAPHTWQLASGTGCEP-CNCNAVHSFGPSCNEF 1147
Query: 78 IGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C +C G C C+ +G+ + CR CDC+ G CD TG+C+C +
Sbjct: 1148 TGQC-QCMPGFGGRTCSECQELFWGDPDVE--CRACDCDPRGIET-PQCDQSTGQCVCVE 1203
Query: 138 NTQGKNCERCLPGYYGDPTDGGTCYYQCMA 167
+G C++C GY G D C+ QC A
Sbjct: 1204 GVEGPRCDKCTRGYSGVFPDCTPCH-QCFA 1232
Score = 149 (57.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 67 LCNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVL 123
+C+ ++ G+ G C C G+ C C+ G Y +A GC+ C CN G
Sbjct: 458 ICDGYTDFSVGLIAGQC-RCKLHVEGERCDVCKEGFYDLSAEDPFGCKSCACNPLGTIPG 516
Query: 124 G-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G CDS TG C C+ G+ C++CLP ++G D C
Sbjct: 517 GNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGC 555
Score = 139 (54.0 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 38/134 (28%), Positives = 52/134 (38%)
Query: 43 CK-GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSY 101
CK G D S + G C+ + C G C C TG C C +
Sbjct: 488 CKEGFYDLSAEDPFGCKSCACNPLGTIPGGNPCDSETGYC-YCKRLVTGQRCDQCLPQHW 546
Query: 102 GNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G + +GCR CDC+ G ++ C +G+C C + G+ C GYY D
Sbjct: 547 GLSNDLDGCRPCDCDL-GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYYFTTLD---- 601
Query: 162 YYQCMARGMLTGPG 175
+Y A GPG
Sbjct: 602 HYIYEAEEANLGPG 615
Score = 133 (51.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSV-LGVCDSITGECI-CQDNTQ 140
C G C C +G +GN + G C+ C C+ + ++ CD TG C+ C +T+
Sbjct: 994 CDPGYIGSRCDGCASGYFGNPSDFGGSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTE 1053
Query: 141 GKNCERCLPGYYGD 154
G +C+ C GYYGD
Sbjct: 1054 GDHCQFCQHGYYGD 1067
Score = 45 (20.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 308 NRTCINN--QCVCPPRRTGPDCQE 329
N +C + QC C P G C E
Sbjct: 567 NNSCSEDSGQCSCLPHMIGRQCNE 590
Score = 40 (19.1 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 301 CPDKCPENRTCINN--QCVCPPRRTGPDCQE 329
C + E C + QCVC GP C +
Sbjct: 1182 CDPRGIETPQCDQSTGQCVCVEGVEGPRCDK 1212
Score = 39 (18.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 305 CPENRTCINNQCVCPPRRTGPDC 327
C ++ + CVC P G C
Sbjct: 981 CYQDPVTLQLACVCDPGYIGSRC 1003
Score = 39 (18.8 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 13/39 (33%), Positives = 14/39 (35%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTG 351
QC C P G C C F +G CD L G
Sbjct: 839 QCQCRPNVVGRTCNR--CAPGTFGFGPNGCKPCDCHLQG 875
Score = 38 (18.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 315 QCVCPPR---RTGPDCQE 329
QC C P RT +CQE
Sbjct: 1150 QCQCMPGFGGRTCSECQE 1167
>ZFIN|ZDB-GENE-021226-2 [details] [associations]
symbol:lamb4 "laminin, beta 4" species:7955 "Danio
rerio" [GO:0005576 "extracellular region" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] ZFIN:ZDB-GENE-021226-2 GO:GO:0007155 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 HSSP:P02468
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 EMBL:AF468050 IPI:IPI00485935 RefSeq:NP_775383.1
UniGene:Dr.120997 ProteinModelPortal:Q8JHV6 STRING:Q8JHV6
PRIDE:Q8JHV6 GeneID:286831 KEGG:dre:286831 CTD:22798
eggNOG:NOG303831 InParanoid:Q8JHV6 KO:K06245 OrthoDB:EOG41G346
NextBio:20806482 ArrayExpress:Q8JHV6 Uniprot:Q8JHV6
Length = 1827
Score = 194 (73.4 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 50/126 (39%), Positives = 62/126 (49%)
Query: 55 LGWTGVDCSVNCLCNNH-ST---CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGC 110
LG G CS C C+ ST C G C C D TG C C G YG C
Sbjct: 893 LGPNG--CSP-CDCDRSGSTTELCDQTTGQCS-CRDGITGLQCNRCYPGYYGFPL----C 944
Query: 111 RKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
R+C CN + +CD ITG+C+ C++++ G+NCERC GY GDP G C C+
Sbjct: 945 RRCQCNR----LADICDPITGDCLDCREHSAGRNCERCEEGYVGDPVSGQPCE-PCLCPD 999
Query: 170 MLTGPG 175
L G G
Sbjct: 1000 -LNGSG 1004
Score = 180 (68.4 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 43/167 (25%), Positives = 71/167 (42%)
Query: 61 DCSVNCLCNNHSTCVH----------GI--GICDECHDWTTGDHCQYCRAGSYGNATTQE 108
D C C++HS H G+ G+CD+C + G C+ C Y +
Sbjct: 329 DVCKRCNCHSHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQDPQRSV 388
Query: 109 ----GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG----DPTDGGT 160
C CDC+ G+ G+CD + G+C+C+ N +G+ C+RC G+YG DP+
Sbjct: 389 DDPYACIPCDCDLDGSVDRGLCDPVNGQCVCKQNIEGERCDRCKVGFYGFSRDDPSGCQL 448
Query: 161 CYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSL 207
C + + P G + E A+ + W +G ++
Sbjct: 449 CRCNFLGTIQVGNPCDPTTGRCICEHFAYGSQCDQCLPGYWGLGNTV 495
Score = 177 (67.4 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 49/150 (32%), Positives = 66/150 (44%)
Query: 37 KCIYGYC----KGPPDYSCQC-ELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
+C GY G P C C +L +G + +C + S G C EC TG
Sbjct: 977 RCEEGYVGDPVSGQPCEPCLCPDLNGSGRFFAFSCNKDPRS----GAPYC-ECLPGHTGP 1031
Query: 92 HCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLG-VCDSITGECI-CQDNTQGKNCERCL 148
C C G YG+ G C++C CN++ + G CD +TGEC+ C NT+G C+ C
Sbjct: 1032 QCDSCSPGFYGDLRLPGGRCKECCCNNNIDPRDGDACDPVTGECLRCLHNTEGPRCQSCK 1091
Query: 149 PGYYGDPTDGGTCYYQCMARGMLTGPGPQG 178
GYYG+ C RG P G
Sbjct: 1092 RGYYGNALAQDCKECSCDRRGTDDSKCPAG 1121
Score = 177 (67.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 48/142 (33%), Positives = 61/142 (42%)
Query: 35 YNKCIYGYCKGPPDYSCQC----ELGWTGVDCSVNCLCNNH------STCVHGIGICDEC 84
Y +C+ G+ GP SC +L G C C CNN+ C G C C
Sbjct: 1021 YCECLPGHT-GPQCDSCSPGFYGDLRLPGGRCK-ECCCNNNIDPRDGDACDPVTGECLRC 1078
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS----VLG---VCDSITGECICQD 137
T G CQ C+ G YGNA Q+ C++C C+ G G CD TG+C C+
Sbjct: 1079 LHNTEGPRCQSCKRGYYGNALAQD-CKECSCDRRGTDDSKCPAGSPCFCDQDTGQCPCRP 1137
Query: 138 NTQGKNCERCLPGYYGDPTDGG 159
QG C C GY+ D G
Sbjct: 1138 GVQGALCNECDDGYWNMDGDYG 1159
Score = 175 (66.7 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 46/158 (29%), Positives = 65/158 (41%)
Query: 13 AKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSC-QCELGWTGVDCSVNCLCNNH 71
A D C + L+ C + C GY C +C G D S C +
Sbjct: 1067 ACDPVTGEC-LRCLHNTEGPRCQS-CKRGYYGNALAQDCKECSCDRRGTDDS-KCPAGSP 1123
Query: 72 STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG 131
C G C C G C C G Y N GC+ C+CN +++ +CD ITG
Sbjct: 1124 CFCDQDTGQCP-CRPGVQGALCNECDDG-YWNMDGDYGCQPCNCNRE-HALNYICDKITG 1180
Query: 132 ECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
+C+CQ G+ C+ C P ++G+P D + C G
Sbjct: 1181 QCLCQPEYGGRICDECGPNHFGNP-DLQCMFCDCNLEG 1217
Score = 173 (66.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 37/97 (38%), Positives = 48/97 (49%)
Query: 63 SVNCLCNN----HSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
+V+C C++ S+C G C +C G C C +YG GC CDC+
Sbjct: 850 AVSCNCHHVGAYGSSCSKFGGQC-QCKPNVIGRCCDSCAPLTYGLGPN--GCSPCDCDRS 906
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
G S +CD TG+C C+D G C RC PGYYG P
Sbjct: 907 G-STTELCDQTTGQCSCRDGITGLQCNRCYPGYYGFP 942
Score = 162 (62.1 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 41/121 (33%), Positives = 56/121 (46%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTG 90
+LC N+C GY DY CQ C + ++N +C+ + G C C G
Sbjct: 1142 ALC-NECDDGYWNMDGDYGCQPCNCNR---EHALNYICDKIT------GQC-LCQPEYGG 1190
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
C C +GN Q C CDCN G +V CD+ TGEC+C+ G C+ C PG
Sbjct: 1191 RICDECGPNHFGNPDLQ--CMFCDCNLEG-TVHPACDAYTGECLCKPGVTGPFCDECAPG 1247
Query: 151 Y 151
+
Sbjct: 1248 H 1248
Score = 152 (58.6 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 37/118 (31%), Positives = 52/118 (44%)
Query: 52 QCELGWTGVD------CSVNCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAG 99
+C++G+ G C + C CN T G CD C + G C C G
Sbjct: 430 RCKVGFYGFSRDDPSGCQL-CRCNFLGTIQVG-NPCDPTTGRCICEHFAYGSQCDQCLPG 487
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTD 157
+G T GC CDC+ G ++ C S+ G+C C+ N G+ C PGY+ P D
Sbjct: 488 YWGLGNTVYGCIPCDCDI-GGALKTECSSVDGQCKCRPNMVGQKCNDPAPGYFLAPLD 544
Score = 150 (57.9 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 37/123 (30%), Positives = 51/123 (41%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDHCQYCRAGSYGNATTQEGC 110
+C G+ G C CN + I G C +C + + G +C+ C G G+ + + C
Sbjct: 933 RCYPGYYGFPLCRRCQCNRLADICDPITGDCLDCREHSAGRNCERCEEGYVGDPVSGQPC 992
Query: 111 RKCDC---NSHGNSVLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGD-PTDGGTCY 162
C C N G C D +G C C G C+ C PG+YGD GG C
Sbjct: 993 EPCLCPDLNGSGRFFAFSCNKDPRSGAPYCECLPGHTGPQCDSCSPGFYGDLRLPGGRCK 1052
Query: 163 YQC 165
C
Sbjct: 1053 ECC 1055
Score = 59 (25.8 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 22/76 (28%), Positives = 30/76 (39%)
Query: 304 KCPENRTCINNQCV--CPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLH 361
KCP C +Q CP R P Q +C NEC + + D + L+
Sbjct: 1117 KCPAGSPCFCDQDTGQCPCR---PGVQGALC-NECDDGYWNMDGDYGCQPCNCNREHALN 1172
Query: 362 YQVDLI--RCTCRQVY 375
Y D I +C C+ Y
Sbjct: 1173 YICDKITGQCLCQPEY 1188
Score = 54 (24.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEF 339
+C+C P TGP C +E P + F
Sbjct: 1229 ECLCKPGVTGPFC-DECAPGHNNNF 1252
Score = 53 (23.7 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 20/51 (39%), Positives = 22/51 (43%)
Query: 308 NRTC--INNQCVCPPRRTGPDCQEEIC-PNEC-HEFLNHGTCDLLLTG-VH 353
N C I QC+C P G C E C PN + L CD L G VH
Sbjct: 1172 NYICDKITGQCLCQPEYGGRICDE--CGPNHFGNPDLQCMFCDCNLEGTVH 1220
Score = 48 (22.0 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 299 FSCPDKCPENRTCINNQCVCPPRRTGPDC 327
FSC +K P + C C P TGP C
Sbjct: 1009 FSC-NKDPRSGA---PYCECLPGHTGPQC 1033
Score = 44 (20.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 312 INNQCVCPPRRTGPDCQE 329
++ QC C P G C +
Sbjct: 516 VDGQCKCRPNMVGQKCND 533
>UNIPROTKB|E1BGE0 [details] [associations]
symbol:E1BGE0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
GeneTree:ENSGT00690000101691 OMA:QGAACDP EMBL:DAAA02043188
EMBL:DAAA02043189 EMBL:DAAA02043190 IPI:IPI00703880
Ensembl:ENSBTAT00000027771 Uniprot:E1BGE0
Length = 1572
Score = 180 (68.4 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 47/142 (33%), Positives = 62/142 (43%)
Query: 30 NASLCY---NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHD 86
N LC+ C G P C G G CS+ C C+NH C G C C
Sbjct: 1353 NGGLCHATNGSCSCGLGWTGPHCELACPAGRYGAACSLECSCHNHGACEPTSGAC-RCGP 1411
Query: 87 WTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
G C++ C G +G GC++ C C HG CD ++G+C+C G+ C
Sbjct: 1412 GFYGQACEHSCPPGFHG-----AGCQQTCQCQ-HG----APCDPVSGQCLCPAGLHGQFC 1461
Query: 145 ER-CLPGYYGDPTDGGTCYYQC 165
ER C PG +G+ G C QC
Sbjct: 1462 ERGCEPGSFGE----G-CGQQC 1478
Score = 173 (66.0 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 62/191 (32%), Positives = 74/191 (38%)
Query: 39 IYGYCKGPPDYS-CQCELGWT----GVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C PP + CE G GV+C C C N C G C WT G HC
Sbjct: 1317 VTGSCSCPPGRTGVHCEHGCPQNRFGVNCEHACSCRNGGLCHATNGSCSCGLGWT-GPHC 1375
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGY 151
+ C AG YG A + E C C++HG C+ +G C C G+ CE C PG+
Sbjct: 1376 ELACPAGRYGAACSLE----CSCHNHG-----ACEPTSGACRCGPGFYGQACEHSCPPGF 1426
Query: 152 YGDPTDGGTCYYQCMARGMLTGP--G----PQGLGSGLAERNAWEGKDTPSRECLWIIGQ 205
+G TC QC G P G P GL ER G C GQ
Sbjct: 1427 HGAGCQQ-TC--QCQ-HGAPCDPVSGQCLCPAGLHGQFCERGCEPGSF--GEGC----GQ 1476
Query: 206 SLDSNSTAPAD 216
D P D
Sbjct: 1477 QCDCELGVPCD 1487
Score = 171 (65.3 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 47/133 (35%), Positives = 60/133 (45%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C P + CQ C GW G C C C N C G C WT G CQ
Sbjct: 801 GACLCRPGFMGSRCQDACPAGWFGPGCQTQCSCANDGLCHPVTGRCSCAPGWT-GLSCQR 859
Query: 96 -CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYY 152
C +G +G C C+C++ G+ G CD+++G C+C+ G CE RC GY+
Sbjct: 860 ACDSGHWG-----PDCSFTCNCSA-GH---GGCDAVSGLCVCEAGYVGPRCEQRCPQGYF 910
Query: 153 GDPTDGGTCYYQC 165
G P G C QC
Sbjct: 911 G-PGCGRQC--QC 920
Score = 158 (60.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 49/169 (28%), Positives = 70/169 (41%)
Query: 34 CYNKCIY---GYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDE 83
C + C+ G C P C C GW G+ C CL C + C++G G+CD
Sbjct: 1043 CQHSCLCQNGGSCD-PVSGHCTCPEGWAGLACEKECLPGVFEVGCPHSCGCLNG-GLCDP 1100
Query: 84 ------CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
C TGD CQ C G++G +E +C C G C ++TG C+C
Sbjct: 1101 HTVHCLCPAGWTGDKCQSSCPEGTFG-VLCEE---RCACR-WG----AACHAVTGACLCP 1151
Query: 137 DNTQGKNCER-CLPGYYGDPT-------DGGTCYY---QCMARGMLTGP 174
+G CE C P ++G+ G C++ +C TGP
Sbjct: 1152 PGWRGSRCESACPPSWFGEACAQRCQCPPGAACHHVTGECHCPPGFTGP 1200
Score = 146 (56.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 37/122 (30%), Positives = 49/122 (40%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C PP + C+ C W G C+ C C + C H G C C TG C
Sbjct: 1144 VTGACLCPPGWRGSRCESACPPSWFGEACAQRCQCPPGAACHHVTGEC-HCPPGFTGPSC 1202
Query: 94 -QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGY 151
Q C G++G Q+ C C + C +G C C G C+ RC PG
Sbjct: 1203 EQACPPGTFGERCGQQ----CHCPGENQA----CHPASGTCACAPGYHGAGCQQRCPPGR 1254
Query: 152 YG 153
+G
Sbjct: 1255 FG 1256
Score = 145 (56.1 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 44/140 (31%), Positives = 56/140 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVH 76
+ SL + C G P SC C GWTG+ +CS +C C N TC
Sbjct: 520 DCSLTCDDCRNGGTCLPTLDSCDCPDGWTGLVCNETCPPDTFGKNCSFSCSCQNGGTCDP 579
Query: 77 GIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECI 134
G C C G HC+ C G YG + CRK C C + G C + G C+
Sbjct: 580 VTGAC-RCPPGVGGAHCEDGCPKGFYG-----KHCRKKCHCANRGR-----CHRLYGACL 628
Query: 135 CQDNTQGKNCE-RCLPGYYG 153
C G+ C C P +G
Sbjct: 629 CDPGLYGRFCHLACPPWAFG 648
Score = 144 (55.7 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 56/189 (29%), Positives = 76/189 (40%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
+ LC C GY GP C+ C G+ G C C C + + C H G C W
Sbjct: 887 SGLCV--CEAGYV-GP---RCEQRCPQGYFGPGCGRQCQCEHGAACDHVSGACTCPAGWR 940
Query: 89 TGDHCQY-CRAGSYGNATTQEGC-RKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCE 145
G C+ C AG +G C CDC++ GV CD ++G C+C QG C
Sbjct: 941 -GTFCERACPAGFFG-----VDCGHACDCSA------GVPCDPVSGSCLCPSGRQGPRCA 988
Query: 146 RCLPGY-YG-DPTDGGTCYY--QC-MARGMLT-GPGPQGLGSGLAERNAWEGKDTPSREC 199
+ P + +G + + +C+ C G GPG G A G+D C
Sbjct: 989 QTCPAHMFGHNCSQACSCFNGASCDPVHGQCRCGPGWTGPTCLQACPEGLYGEDC-QHSC 1047
Query: 200 LWIIGQSLD 208
L G S D
Sbjct: 1048 LCQNGGSCD 1056
Score = 141 (54.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 36/99 (36%), Positives = 47/99 (47%)
Query: 59 GVDCSVNCL-CNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDC 115
G DCS+ C C N TC+ + CD C D TG C + C ++G + C C C
Sbjct: 518 GPDCSLTCDDCRNGGTCLPTLDSCD-CPDGWTGLVCNETCPPDTFG-----KNCSFSCSC 571
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ G G CD +TG C C G +CE C G+YG
Sbjct: 572 QN-G----GTCDPVTGACRCPPGVGGAHCEDGCPKGFYG 605
Score = 139 (54.0 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 45/134 (33%), Positives = 58/134 (43%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
C +C GY G D +C G G +CS +C C + + C G C C TGD C
Sbjct: 715 CGKQCPAGY-HGE-DCGQECPAGTFGQNCSGSCSCGD-APCDRVTGQC-LCPPGRTGDDC 770
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GY 151
C G +G QE C C+ HG C TG C+C+ G C+ P G+
Sbjct: 771 GADCPEGRWGLGC-QEICPPCE---HG----AACVPETGACLCRPGFMGSRCQDACPAGW 822
Query: 152 YGDPTDGGTCYYQC 165
+G P G C QC
Sbjct: 823 FG-P--G--CQTQC 831
Score = 135 (52.6 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 39/136 (28%), Positives = 54/136 (39%)
Query: 29 FNASLCYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIG 79
F+ S C N C + G C+ PP C+ C G+ G C C C N C G
Sbjct: 567 FSCS-CQNGGTCDPVTGACRCPPGVGGAHCEDGCPKGFYGKHCRKKCHCANRGRCHRLYG 625
Query: 80 ICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
C C G C C ++G ++E C C CD G C C+
Sbjct: 626 AC-LCDPGLYGRFCHLACPPWAFGPGCSEE----CKCEQQNTRA---CDKRDGSCACKAG 677
Query: 139 TQGKNCE-RCLPGYYG 153
+G+ C+ C PG++G
Sbjct: 678 FRGEWCQDECQPGFFG 693
Score = 134 (52.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 44/149 (29%), Positives = 62/149 (41%)
Query: 31 ASLCYN--KC--IYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGIC 81
A C+N C ++G C+ P ++ C C G G DC +CLC N +C G C
Sbjct: 1003 ACSCFNGASCDPVHGQCRCGPGWTGPTCLQACPEGLYGEDCQHSCLCQNGGSCDPVSGHC 1062
Query: 82 DECHDWTTGDHCQY-CRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQDNT 139
C + G C+ C G + + GC C C +G G+CD T C+C
Sbjct: 1063 T-CPEGWAGLACEKECLPGVF-----EVGCPHSCGC-LNG----GLCDPHTVHCLCPAGW 1111
Query: 140 QGKNCERCLPGYYGDPTDGGTCYYQCMAR 168
G C+ P + T G C +C R
Sbjct: 1112 TGDKCQSSCP----EGTFGVLCEERCACR 1136
Score = 119 (46.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 34/109 (31%), Positives = 48/109 (44%)
Query: 51 CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICD-ECHDWTTGDHC-QYCRAGSYGNATT 106
CQ C+ G+ G C C C C G C +C G+ C Q C AG++G
Sbjct: 683 CQDECQPGFFGPGCRQACTCPPGVACDPVSGECGKQCPAGYHGEDCGQECPAGTFG---- 738
Query: 107 QEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ C C C G++ CD +TG+C+C G +C C G +G
Sbjct: 739 -QNCSGSCSC---GDAP---CDRVTGQCLCPPGRTGDDCGADCPEGRWG 780
Score = 119 (46.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 41/135 (30%), Positives = 47/135 (34%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C P Y CQ C G G C + C C N +C G C C G C
Sbjct: 1233 GTCACAPGYHGAGCQQRCPPGRFGPGCELLCGCLNGGSCDAVTGAC-RCPAGFLGTDCSL 1291
Query: 96 -CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C G +G GC C C G CD +TG C C G +CE P
Sbjct: 1292 ACPHGRFG-----PGCAYVCGCGQ-G----AACDPVTGSCSCPPGRTGVHCEHGCP---- 1337
Query: 154 DPTDGGTCYYQCMAR 168
G C + C R
Sbjct: 1338 QNRFGVNCEHACSCR 1352
Score = 100 (40.3 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 35/120 (29%), Positives = 47/120 (39%)
Query: 53 CELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGC 110
C+ G G DCS C C+ H C G+C C G C Q C G +G ++ C
Sbjct: 861 CDSGHWGPDCSFTCNCSAGHGGCDAVSGLC-VCEAGYVGPRCEQRCPQGYFGPGCGRQ-C 918
Query: 111 RKCDCNSHGNSVLGVCDSITG------ECICQDNTQGKNCER---CLPGYYGDPTDGGTC 161
+ C+ + + V G C G E C G +C C G DP G +C
Sbjct: 919 Q-CEHGAACDHVSGACTCPAGWRGTFCERACPAGFFGVDCGHACDCSAGVPCDPVSG-SC 976
Score = 95 (38.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 38/115 (33%), Positives = 50/115 (43%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICD-ECHDWTTGDHCQYCRAGSY--GNATTQE 108
+C GW+ S CL ++ + C G C+ ECH+ G +C+ C G G+ T
Sbjct: 104 RCCPGWSQQPGSQGCL-SHVNECATGNAGCEGECHNTVGGFYCR-CPPGRQLQGDGKT-- 159
Query: 109 GCRKCD-CNSHGNSVLGVCDSITGECICQDNTQGKN-CERCLPGYYGDPTDGGTC 161
CR D C H G C C+ NT G CE C PG+ DG TC
Sbjct: 160 -CRDVDECQVHN----GGCQH---RCV---NTPGSYFCE-CKPGFRLH-ADGRTC 201
Score = 89 (36.4 bits), Expect = 0.00083, Sum P(2) = 0.00082
Identities = 44/155 (28%), Positives = 58/155 (37%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQE-GC 110
C G+ GVDC C C+ C G C C G C Q C A +G+ +Q C
Sbjct: 948 CPAGFFGVDCGHACDCSAGVPCDPVSGSC-LCPSGRQGPRCAQTCPAHMFGHNCSQACSC 1006
Query: 111 -RKCDCNS-HGNSVLGVCDSITGE-CI--CQDNTQGKNCER---CLPGYYGDPTDG---- 158
C+ HG G TG C+ C + G++C+ C G DP G
Sbjct: 1007 FNGASCDPVHGQCRCG--PGWTGPTCLQACPEGLYGEDCQHSCLCQNGGSCDPVSGHCTC 1064
Query: 159 --G----TCYYQCMARGMLTG-PGPQG-LGSGLAE 185
G C +C+ G P G L GL +
Sbjct: 1065 PEGWAGLACEKECLPGVFEVGCPHSCGCLNGGLCD 1099
Score = 82 (33.9 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
+CP C + +C CPP TGP C E+ CP
Sbjct: 1177 QCPPGAACHHVTGECHCPPGFTGPSC-EQACP 1207
Score = 81 (33.6 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICP 333
SC D P +R + QC+CPP RTG DC + CP
Sbjct: 746 SCGD-APCDR--VTGQCLCPPGRTGDDCGAD-CP 775
Score = 75 (31.5 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVH 353
SC CP RT ++ + CP R G +C+ C N CH +C L TG H
Sbjct: 1320 SC--SCPPGRTGVHCEHGCPQNRFGVNCEHACSCRNGGLCHATNGSCSCGLGWTGPH 1374
Score = 71 (30.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 20/57 (35%), Positives = 24/57 (42%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP-NECHEFLNHGTCDLLLTGV-HITHG 357
C + C + C CPP RTG C E CP N H C G+ H T+G
Sbjct: 1308 CGQGAACDPVTGSCSCPPGRTGVHC-EHGCPQNRFGVNCEHA-CSCRNGGLCHATNG 1362
Score = 69 (29.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN-----EC-HEFL--NHGTCD 346
C +C ++ QC C P TGP C + CP +C H L N G+CD
Sbjct: 1006 CFNGASCDPVHGQCRCGPGWTGPTCLQA-CPEGLYGEDCQHSCLCQNGGSCD 1056
Score = 67 (28.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 20/57 (35%), Positives = 25/57 (43%)
Query: 305 CP-ENRTC--INNQCVCPPRRTGPDCQEEICPNE----CHEF---LNHGTCDLLLTG 351
CP EN+ C + C C P G CQ+ P C LN G+CD + TG
Sbjct: 1221 CPGENQACHPASGTCACAPGYHGAGCQQRCPPGRFGPGCELLCGCLNGGSCDAV-TG 1276
Score = 64 (27.6 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 23/79 (29%), Positives = 28/79 (35%)
Query: 281 IHYKQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN---- 334
+H + G P F + +C C C N C C TGP C E CP
Sbjct: 1330 VHCEHGCPQNRFGVNCE-HAC--SCRNGGLCHATNGSCSCGLGWTGPHC-ELACPAGRYG 1385
Query: 335 -------ECHEFLNHGTCD 346
CH NHG C+
Sbjct: 1386 AACSLECSCH---NHGACE 1401
Score = 63 (27.2 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHGTCD 346
C +C ++ C CP G C++E CP+ C LN G CD
Sbjct: 1049 CQNGGSCDPVSGHCTCPEGWAGLACEKECLPGVFEVGCPHSCG-CLNGGLCD 1099
Score = 61 (26.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 21/74 (28%), Positives = 28/74 (37%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPN--ECHEFLNHGTCDLLLTGVHITHGRTL 360
+CP + CP R GP C C C +C TGVH HG
Sbjct: 1279 RCPAGFLGTDCSLACPHGRFGPGCAYVCGCGQGAACDPVTGSCSCPPGRTGVHCEHGCPQ 1338
Query: 361 H-YQVDLIR-CTCR 372
+ + V+ C+CR
Sbjct: 1339 NRFGVNCEHACSCR 1352
Score = 60 (26.2 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEF 339
C C ++ C+CP R GP C + CP H F
Sbjct: 963 CSAGVPCDPVSGSCLCPSGRQGPRCAQT-CP--AHMF 996
Score = 60 (26.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEE 330
C CPE R + Q +CPP G C E
Sbjct: 770 CGADCPEGRWGLGCQEICPPCEHGAACVPE 799
Score = 57 (25.1 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 312 INNQCVCPPRRTGPDC 327
+ C+CPP RTG C
Sbjct: 1489 VTGHCLCPPGRTGTTC 1504
Score = 57 (25.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 21/82 (25%), Positives = 28/82 (34%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEI- 331
+ G M + P+ F Q C C + C + +C C P TG CQ
Sbjct: 806 RPGFMGSRCQDACPAGWFGPGCQT-QC--SCANDGLCHPVTGRCSCAPGWTGLSCQRACD 862
Query: 332 -------CPNECHEFLNHGTCD 346
C C+ HG CD
Sbjct: 863 SGHWGPDCSFTCNCSAGHGGCD 884
Score = 56 (24.8 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 305 CPENRTCINN--------QCVCPPRRTGPDCQEEICP 333
CP + C+N C+CP TG CQ CP
Sbjct: 1086 CPHSCGCLNGGLCDPHTVHCLCPAGWTGDKCQSS-CP 1121
Score = 56 (24.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 301 CPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
CP C C+ C+C P G CQ+ CP
Sbjct: 787 CPP-CEHGAACVPETGACLCRPGFMGSRCQDA-CP 819
Score = 55 (24.4 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 301 CPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEICP 333
C ++C C + C+CPP G C E CP
Sbjct: 1129 CEERCACRWGAACHAVTGACLCPPGWRGSRC-ESACP 1164
Score = 55 (24.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CPP GP C EE C +C + N CD
Sbjct: 642 CPPWAFGPGCSEE-C--KCEQ-QNTRACD 666
Score = 53 (23.7 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEI 331
C C ++ QC+C TGP C++ +
Sbjct: 1523 CGGGADCDPVSGQCLCVDGYTGPTCRQAV 1551
Score = 53 (23.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 305 CPENRTC--INNQC--VCPPRRTGPDCQEEICP 333
CP C ++ +C CP G DC +E CP
Sbjct: 702 CPPGVACDPVSGECGKQCPAGYHGEDCGQE-CP 733
Score = 49 (22.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C C ++ C CP G C E CP
Sbjct: 919 QCEHGAACDHVSGACTCPAGWRGTFC-ERACP 949
Score = 49 (22.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 15/51 (29%), Positives = 20/51 (39%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGV 352
+C C ++ QC+CP G C+ P E CD L GV
Sbjct: 1436 QCQHGAPCDPVSGQCLCPAGLHGQFCERGCEPGSFGEGCGQ-QCDCEL-GV 1484
Score = 49 (22.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 312 INNQCVCPPRRTGPDCQEEICP 333
++ CVC GP C++ CP
Sbjct: 886 VSGLCVCEAGYVGPRCEQR-CP 906
Score = 48 (22.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 14/50 (28%), Positives = 16/50 (32%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPN--ECHEFLNHGTCDLLLTG 351
CP + CPP G C + CP CH C TG
Sbjct: 1150 CPPGWRGSRCESACPPSWFGEACAQRCQCPPGAACHHVTGECHCPPGFTG 1199
Score = 44 (20.5 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
C +C + C CP G DC CP+
Sbjct: 1265 CLNGGSCDAVTGACRCPAGFLGTDCSLA-CPH 1295
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 301 CPDKCP---EN-RTCI--NNQCVCPPRRTGPDCQEEICP 333
C ++C +N R C + C C G CQ+E P
Sbjct: 651 CSEECKCEQQNTRACDKRDGSCACKAGFRGEWCQDECQP 689
Score = 37 (18.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 14/44 (31%), Positives = 15/44 (34%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CP--NECHEFLNHGTC 345
CP T Q CP G C+E C CH G C
Sbjct: 1107 CPAGWTGDKCQSSCPEGTFGVLCEERCACRWGAACHAVT--GAC 1148
>RGD|621188 [details] [associations]
symbol:Megf6 "multiple EGF-like-domains 6" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662
CTD:1953 HOGENOM:HOG000097840 HOVERGEN:HBG079790 EMBL:AB011532
IPI:IPI00207575 PIR:T13954 RefSeq:NP_075244.1 UniGene:Rn.195598
ProteinModelPortal:O88281 PRIDE:O88281 GeneID:65049 KEGG:rno:65049
UCSC:RGD:621188 InParanoid:O88281 NextBio:613892
Genevestigator:O88281 Uniprot:O88281
Length = 1574
Score = 181 (68.8 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 39/108 (36%), Positives = 53/108 (49%)
Query: 51 CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQ 107
CQ C GW G C + C C N C G C WT G CQ C +G +G
Sbjct: 817 CQDTCSAGWYGTGCQIRCACANDGHCDPTTGRCSCAPGWT-GLSCQRACDSGHWG----P 871
Query: 108 EGCRKCDCNS-HGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ C+C++ HGN CD+++G C+C+ +G CE+ C GYYG
Sbjct: 872 DCIHPCNCSAGHGN-----CDAVSGLCLCEAGYEGPRCEQSCRQGYYG 914
Score = 166 (63.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 44/136 (32%), Positives = 60/136 (44%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-Q 94
G+C P ++ CQ C G GV C +C C ++C H G C C G HC Q
Sbjct: 1106 GHCLCPAGWTGDKCQSSCVSGTFGVHCEEHCACRKGASCHHVTGACF-CPPGWRGPHCEQ 1164
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
C G +G A Q +C C ++ + C +TGEC C G +CE+ C PG +G
Sbjct: 1165 ACPRGWFGEACAQ----RCLCPTNAS-----CHHVTGECRCPPGFTGLSCEQACQPGTFG 1215
Query: 154 DPTDGGTCYYQCMARG 169
C + C G
Sbjct: 1216 KD-----CEHLCQCPG 1226
Score = 162 (62.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 54/187 (28%), Positives = 78/187 (41%)
Query: 29 FNASLCYNKCIYGYCKGPPDY---SC--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDE 83
FN + C + + G C P + +C C G G +C +CLC N C +G C
Sbjct: 1010 FNGASCDS--VTGQCHCAPGWMGPTCLQACPPGLYGKNCQHSCLCRNGGRCDPILGQCT- 1066
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQG 141
C + TG C+ C G Y GC+ C C HG G+CD +TG C+C G
Sbjct: 1067 CPEGWTGLACENECLPGHYA-----AGCQLNCSC-LHG----GICDRLTGHCLCPAGWTG 1116
Query: 142 KNCER-CLPGYYGDPTD-------GGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKD 193
C+ C+ G +G + G +C++ + PG +G A W G+
Sbjct: 1117 DKCQSSCVSGTFGVHCEEHCACRKGASCHH--VTGACFCPPGWRGPHCEQACPRGWFGEA 1174
Query: 194 TPSRECL 200
R CL
Sbjct: 1175 CAQR-CL 1180
Score = 161 (61.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 45/142 (31%), Positives = 62/142 (43%)
Query: 34 CYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
C++ + G C PP + C+ C GW G C+ CLC +++C H G C C
Sbjct: 1144 CHH--VTGACFCPPGWRGPHCEQACPRGWFGEACAQRCLCPTNASCHHVTGEC-RCPPGF 1200
Query: 89 TGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ER 146
TG C Q C+ G++G + C C G + CD +G C C G C +R
Sbjct: 1201 TGLSCEQACQPGTFG-----KDCEHL-CQCPGET--WACDPASGVCTCAAGYHGTGCLQR 1252
Query: 147 CLPGYYGDPTD-------GGTC 161
C G YG + GGTC
Sbjct: 1253 CPSGRYGPGCEHICKCLNGGTC 1274
Score = 160 (61.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 47/135 (34%), Positives = 57/135 (42%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHC- 93
G C P + SCQ C+ G G DC C C+ H C G+C C G C
Sbjct: 847 GRCSCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLC-LCEAGYEGPRCE 905
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GYY 152
Q CR G YG + Q KC C HG CD ++G C C +G CE P G++
Sbjct: 906 QSCRQGYYGPSCEQ----KCRCE-HG----AACDHVSGACTCPAGWRGSFCEHACPAGFF 956
Query: 153 GDPTDGGTCYYQCMA 167
G D C C A
Sbjct: 957 GLDCDSA-C--NCSA 968
Score = 156 (60.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 44/144 (30%), Positives = 64/144 (44%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N LC+ G C P + C+ C G G C + C C N+ +C G C C
Sbjct: 1356 NGGLCH--ATNGSCSCPLGWMGPHCEHACPAGRYGAACLLECFCQNNGSCEPTTGAC-LC 1412
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G C++ C +G +G GC++ C+C G CD ++G+C+C G+
Sbjct: 1413 GPGFYGQACEHSCPSGFHG-----PGCQRVCECQQ-G----APCDPVSGQCLCPAGFHGQ 1462
Query: 143 NCER-CLPGYYGDPTDGGTCYYQC 165
CE+ C G +GD G C QC
Sbjct: 1463 FCEKGCESGSFGD---G--CLQQC 1481
Score = 151 (58.2 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 43/140 (30%), Positives = 56/140 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVH 76
+ SL + C G P C C GWTG+ +CS C C N TC
Sbjct: 523 DCSLTCDDCRNGGTCFPGQDGCDCPEGWTGIICNETCPPDTFGKNCSSPCTCQNGGTCDP 582
Query: 77 GIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECI 134
+G C C +G HC+ C G YG + CRK C C + G C + G C+
Sbjct: 583 VLGAC-RCPPGVSGAHCEDGCPKGFYG-----KHCRKKCHCANRGR-----CHRLYGACL 631
Query: 135 CQDNTQGKNCE-RCLPGYYG 153
C G+ C C P +G
Sbjct: 632 CDPGLYGRFCHLACPPWAFG 651
Score = 150 (57.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 42/128 (32%), Positives = 56/128 (43%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
+ LC C GY +GP C+ C G+ G C C C + + C H G C W
Sbjct: 890 SGLCL--CEAGY-EGP---RCEQSCRQGYYGPSCEQKCRCEHGAACDHVSGACTCPAGWR 943
Query: 89 TGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNC-E 145
G C++ C AG +G DC+S N G CD++TG CIC G C +
Sbjct: 944 -GSFCEHACPAGFFG----------LDCDSACNCSAGAPCDAVTGSCICPAGRWGPRCAQ 992
Query: 146 RCLPGYYG 153
C P +G
Sbjct: 993 SCPPLTFG 1000
Score = 144 (55.7 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 39/122 (31%), Positives = 52/122 (42%)
Query: 39 IYGYCK-GPPDYSCQCELGWT----GVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C P +CE G G C + C C N C G C W G HC
Sbjct: 1320 VSGACICSPGKTGVRCEHGCPQDRFGKGCELKCACRNGGLCHATNGSCSCPLGWM-GPHC 1378
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GY 151
++ C AG YG A E C C ++G+ C+ TG C+C G+ CE P G+
Sbjct: 1379 EHACPAGRYGAACLLE----CFCQNNGS-----CEPTTGACLCGPGFYGQACEHSCPSGF 1429
Query: 152 YG 153
+G
Sbjct: 1430 HG 1431
Score = 140 (54.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 35/97 (36%), Positives = 45/97 (46%)
Query: 59 GVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDCN 116
G++CS C C N ++C G C W G C Q C G YG + C+ C C
Sbjct: 1000 GLNCSQICTCFNGASCDSVTGQCHCAPGWM-GPTCLQACPPGLYG-----KNCQHSCLCR 1053
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYY 152
+ G CD I G+C C + G CE CLPG+Y
Sbjct: 1054 NGGR-----CDPILGQCTCPEGWTGLACENECLPGHY 1085
Score = 139 (54.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 40/124 (32%), Positives = 53/124 (42%)
Query: 39 IYGYCKGPP-----DYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDH 92
+ G C PP D C G G+ C C C + ++C G C C G
Sbjct: 758 VTGECLCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTC-LCLPGFVGSR 816
Query: 93 CQ-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLP 149
CQ C AG YG GC+ +C C + G+ CD TG C C G +C+R C
Sbjct: 817 CQDTCSAGWYGT-----GCQIRCACANDGH-----CDPTTGRCSCAPGWTGLSCQRACDS 866
Query: 150 GYYG 153
G++G
Sbjct: 867 GHWG 870
Score = 136 (52.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 43/148 (29%), Positives = 58/148 (39%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGIGICDE------ 83
KC+ G P +C C G+ G DCS+ C C + C G CD
Sbjct: 1267 KCLNGGTCDPATGACYCPAGFLGADCSLACPQGRFGPSCAHVCACRQGAA-CDPVSGACI 1325
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQG 141
C TG C++ C +G +GC KC C + G G+C + G C C G
Sbjct: 1326 CSPGKTGVRCEHGCPQDRFG-----KGCELKCACRN-G----GLCHATNGSCSCPLGWMG 1375
Query: 142 KNCERCLP-GYYGDPTDGGTCYYQCMAR 168
+CE P G YG C +C +
Sbjct: 1376 PHCEHACPAGRYG-----AACLLECFCQ 1398
Score = 132 (51.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 42/144 (29%), Positives = 62/144 (43%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C+ PP S C+ C G+ G C C C N C G C C G C
Sbjct: 583 VLGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHCANRGRCHRLYGAC-LCDPGLYGRFC 641
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGY 151
C ++G +++ C C+ SH S C+ G C C+ QG+ C+ C G+
Sbjct: 642 HLACPPWAFGPGCSED-CL-CE-QSHTRS----CNPKDGSCSCKAGFQGERCQAECESGF 694
Query: 152 YGDPTDGGTCYYQCMAR-GMLTGP 174
+G P G C ++C + G+ P
Sbjct: 695 FG-P--G--CRHRCTCQPGVACDP 713
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 36/113 (31%), Positives = 47/113 (41%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C P + C+ CE G G C C C+ C G+C C TG C
Sbjct: 1449 VSGQCLCPAGFHGQFCEKGCESGSFGDGCLQQCNCHTGVPCDPISGLC-LCPPGRTGAAC 1507
Query: 94 QY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
CR G +G GC +CDC + CD I+G+C C D+ G C
Sbjct: 1508 DLDCRRGRFG-----PGCALRCDCGGGAD-----CDPISGQCHCVDSYMGPTC 1550
Score = 127 (49.8 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 35/119 (29%), Positives = 49/119 (41%)
Query: 46 PPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTTGDHCQYCRA 98
P D SC C+ G+ G C C C + TC G+ CD +G+ C
Sbjct: 670 PKDGSCSCKAGFQGERCQAECESGFFGPGCRHRCTCQPGVA-CDP----VSGECRTQCPP 724
Query: 99 GSYGNATTQE---GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
G G QE G +C+ + V C +TGEC+C G++C C G +G
Sbjct: 725 GYQGEDCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGADCPEGRWG 783
Score = 125 (49.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 40/121 (33%), Positives = 53/121 (43%)
Query: 41 GYCK-GPPDY--SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C GP Y +C+ C G+ G C C C + C G C C G C+
Sbjct: 1408 GACLCGPGFYGQACEHSCPSGFHGPGCQRVCECQQGAPCDPVSGQC-LCPAGFHGQFCEK 1466
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCER-CLPGYY 152
C +GS+G +GC + CN H GV CD I+G C+C G C+ C G +
Sbjct: 1467 GCESGSFG-----DGCLQ-QCNCH----TGVPCDPISGLCLCPPGRTGAACDLDCRRGRF 1516
Query: 153 G 153
G
Sbjct: 1517 G 1517
Score = 71 (30.1 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEIC 332
CP N +C + +C CPP TG C E+ C
Sbjct: 1181 CPTNASCHHVTGECRCPPGFTGLSC-EQAC 1209
Score = 70 (29.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 300 SCPDKCP-ENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C C C + +C+CPP +TG DC + CP
Sbjct: 743 NCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGAD-CP 778
Score = 67 (28.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C + +C + C CPP GP C E+ CP
Sbjct: 1138 CRKGASCHHVTGACFCPPGWRGPHC-EQACP 1167
Score = 66 (28.3 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 16/29 (55%), Positives = 17/29 (58%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP R GP C E IC +C LN GTCD
Sbjct: 1253 CPSGRYGPGC-EHIC--KC---LNGGTCD 1275
Score = 64 (27.6 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 17/63 (26%), Positives = 23/63 (36%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEF---LNHGTCDLLLTGVHI 354
C C + C+CP R GP C + CP C + N +CD + H
Sbjct: 966 CSAGAPCDAVTGSCICPAGRWGPRCAQS-CPPLTFGLNCSQICTCFNGASCDSVTGQCHC 1024
Query: 355 THG 357
G
Sbjct: 1025 APG 1027
Score = 62 (26.9 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE 335
C + C ++ C+C P +TG C E CP +
Sbjct: 1311 CRQGAACDPVSGACICSPGKTGVRC-EHGCPQD 1342
Score = 62 (26.9 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 19/55 (34%), Positives = 23/55 (41%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP-----NEC-HEFL--NHGTCDLLL 349
C +C + QC C P GP C + CP C H L N G CD +L
Sbjct: 1009 CFNGASCDSVTGQCHCAPGWMGPTCLQA-CPPGLYGKNCQHSCLCRNGGRCDPIL 1062
Score = 62 (26.9 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 20/61 (32%), Positives = 24/61 (39%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEIC 332
K+GV H G P + F ++ C C C N C CP GP C E C
Sbjct: 1330 KTGVRCEH---GCPQDRFGKGCEL-KCA--CRNGGLCHATNGSCSCPLGWMGPHC-EHAC 1382
Query: 333 P 333
P
Sbjct: 1383 P 1383
Score = 61 (26.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 21/71 (29%), Positives = 29/71 (40%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQV 364
C T ++ Q C GPDC I P C HG CD + +G+ + Y+
Sbjct: 851 CAPGWTGLSCQRACDSGHWGPDC---IHPCNCSA--GHGNCDAV-SGLCLCEAG---YEG 901
Query: 365 DLIRCTCRQVY 375
+CRQ Y
Sbjct: 902 PRCEQSCRQGY 912
Score = 60 (26.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 20/56 (35%), Positives = 22/56 (39%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE----CH---EFLNHGTCDLLLTG 351
C C I QC CP TG C+ E P C L+ G CD L TG
Sbjct: 1052 CRNGGRCDPILGQCTCPEGWTGLACENECLPGHYAAGCQLNCSCLHGGICDRL-TG 1106
Score = 60 (26.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 20/73 (27%), Positives = 28/73 (38%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVHITHGRTL- 360
C +T + + CP R G C+ + C N CH +C L G H H
Sbjct: 1326 CSPGKTGVRCEHGCPQDRFGKGCELKCACRNGGLCHATNGSCSCPLGWMGPHCEHACPAG 1385
Query: 361 HYQVD-LIRCTCR 372
Y L+ C C+
Sbjct: 1386 RYGAACLLECFCQ 1398
Score = 58 (25.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 17/60 (28%), Positives = 23/60 (38%)
Query: 305 CPENRTC--INNQC--VCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTL 360
C C ++ +C CPP G DC +E CP G+C + H G L
Sbjct: 705 CQPGVACDPVSGECRTQCPPGYQGEDCGQE-CPVGTFGVNCSGSCSCVGAPCHRVTGECL 763
Score = 56 (24.8 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 312 INNQCVCPPRRTGPDC 327
I+ C+CPP RTG C
Sbjct: 1492 ISGLCLCPPGRTGAAC 1507
Score = 56 (24.8 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEE 330
C CPE R + Q +CP G C E
Sbjct: 773 CGADCPEGRWGLGCQEICPACEHGASCNPE 802
Score = 55 (24.4 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNE 335
+CP T ++ + C P G DC+ CP E
Sbjct: 1195 RCPPGFTGLSCEQACQPGTFGKDCEHLCQCPGE 1227
Score = 55 (24.4 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 19/72 (26%), Positives = 27/72 (37%)
Query: 268 GYEVLEAKSGVMTIH--YKQGKPSEGFNATYQIFSCPDKC--PENRTC--INNQCVCPPR 321
G+ +A SG+ Y+ + + Y SC KC C ++ C CP
Sbjct: 882 GHGNCDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCEQKCRCEHGAACDHVSGACTCPAG 941
Query: 322 RTGPDCQEEICP 333
G C E CP
Sbjct: 942 WRGSFC-EHACP 952
Score = 50 (22.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 12/32 (37%), Positives = 12/32 (37%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
KC TC C CP G DC CP
Sbjct: 1267 KCLNGGTCDPATGACYCPAGFLGADCSLA-CP 1297
Score = 49 (22.3 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 318 CPPRRTGPDCQEEICPNECH 337
CPP GP C E+ + H
Sbjct: 645 CPPWAFGPGCSEDCLCEQSH 664
Score = 48 (22.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQE 329
+C + C ++ QC+CP G C++
Sbjct: 1439 ECQQGAPCDPVSGQCLCPAGFHGQFCEK 1466
Score = 46 (21.3 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQ 328
C C + C+CP TG CQ
Sbjct: 1095 CLHGGICDRLTGHCLCPAGWTGDKCQ 1120
Score = 46 (21.3 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQE 329
C C I+ QC C GP C+E
Sbjct: 1526 CGGGADCDPISGQCHCVDSYMGPTCRE 1552
Score = 45 (20.9 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 301 CPDKCPENRTCI--NNQCVCPPRRTGPDCQE 329
CP C +C C+C P G CQ+
Sbjct: 790 CP-ACEHGASCNPETGTCLCLPGFVGSRCQD 819
Score = 42 (19.8 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 318 CPPRRTGPDCQEEICPNECHE 338
CP GP CQ +C EC +
Sbjct: 1425 CPSGFHGPGCQR-VC--ECQQ 1442
Score = 39 (18.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 9/23 (39%), Positives = 9/23 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDC 327
CP RT C R GP C
Sbjct: 1498 CPPGRTGAACDLDCRRGRFGPGC 1520
>UNIPROTKB|O88281 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621188 GO:GO:0005576 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 CTD:1953 HOGENOM:HOG000097840
HOVERGEN:HBG079790 EMBL:AB011532 IPI:IPI00207575 PIR:T13954
RefSeq:NP_075244.1 UniGene:Rn.195598 ProteinModelPortal:O88281
PRIDE:O88281 GeneID:65049 KEGG:rno:65049 UCSC:RGD:621188
InParanoid:O88281 NextBio:613892 Genevestigator:O88281
Uniprot:O88281
Length = 1574
Score = 181 (68.8 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 39/108 (36%), Positives = 53/108 (49%)
Query: 51 CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQ 107
CQ C GW G C + C C N C G C WT G CQ C +G +G
Sbjct: 817 CQDTCSAGWYGTGCQIRCACANDGHCDPTTGRCSCAPGWT-GLSCQRACDSGHWG----P 871
Query: 108 EGCRKCDCNS-HGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ C+C++ HGN CD+++G C+C+ +G CE+ C GYYG
Sbjct: 872 DCIHPCNCSAGHGN-----CDAVSGLCLCEAGYEGPRCEQSCRQGYYG 914
Score = 166 (63.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 44/136 (32%), Positives = 60/136 (44%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-Q 94
G+C P ++ CQ C G GV C +C C ++C H G C C G HC Q
Sbjct: 1106 GHCLCPAGWTGDKCQSSCVSGTFGVHCEEHCACRKGASCHHVTGACF-CPPGWRGPHCEQ 1164
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
C G +G A Q +C C ++ + C +TGEC C G +CE+ C PG +G
Sbjct: 1165 ACPRGWFGEACAQ----RCLCPTNAS-----CHHVTGECRCPPGFTGLSCEQACQPGTFG 1215
Query: 154 DPTDGGTCYYQCMARG 169
C + C G
Sbjct: 1216 KD-----CEHLCQCPG 1226
Score = 162 (62.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 54/187 (28%), Positives = 78/187 (41%)
Query: 29 FNASLCYNKCIYGYCKGPPDY---SC--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDE 83
FN + C + + G C P + +C C G G +C +CLC N C +G C
Sbjct: 1010 FNGASCDS--VTGQCHCAPGWMGPTCLQACPPGLYGKNCQHSCLCRNGGRCDPILGQCT- 1066
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQG 141
C + TG C+ C G Y GC+ C C HG G+CD +TG C+C G
Sbjct: 1067 CPEGWTGLACENECLPGHYA-----AGCQLNCSC-LHG----GICDRLTGHCLCPAGWTG 1116
Query: 142 KNCER-CLPGYYGDPTD-------GGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKD 193
C+ C+ G +G + G +C++ + PG +G A W G+
Sbjct: 1117 DKCQSSCVSGTFGVHCEEHCACRKGASCHH--VTGACFCPPGWRGPHCEQACPRGWFGEA 1174
Query: 194 TPSRECL 200
R CL
Sbjct: 1175 CAQR-CL 1180
Score = 161 (61.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 45/142 (31%), Positives = 62/142 (43%)
Query: 34 CYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
C++ + G C PP + C+ C GW G C+ CLC +++C H G C C
Sbjct: 1144 CHH--VTGACFCPPGWRGPHCEQACPRGWFGEACAQRCLCPTNASCHHVTGEC-RCPPGF 1200
Query: 89 TGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ER 146
TG C Q C+ G++G + C C G + CD +G C C G C +R
Sbjct: 1201 TGLSCEQACQPGTFG-----KDCEHL-CQCPGET--WACDPASGVCTCAAGYHGTGCLQR 1252
Query: 147 CLPGYYGDPTD-------GGTC 161
C G YG + GGTC
Sbjct: 1253 CPSGRYGPGCEHICKCLNGGTC 1274
Score = 160 (61.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 47/135 (34%), Positives = 57/135 (42%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHC- 93
G C P + SCQ C+ G G DC C C+ H C G+C C G C
Sbjct: 847 GRCSCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLC-LCEAGYEGPRCE 905
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GYY 152
Q CR G YG + Q KC C HG CD ++G C C +G CE P G++
Sbjct: 906 QSCRQGYYGPSCEQ----KCRCE-HG----AACDHVSGACTCPAGWRGSFCEHACPAGFF 956
Query: 153 GDPTDGGTCYYQCMA 167
G D C C A
Sbjct: 957 GLDCDSA-C--NCSA 968
Score = 156 (60.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 44/144 (30%), Positives = 64/144 (44%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N LC+ G C P + C+ C G G C + C C N+ +C G C C
Sbjct: 1356 NGGLCH--ATNGSCSCPLGWMGPHCEHACPAGRYGAACLLECFCQNNGSCEPTTGAC-LC 1412
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G C++ C +G +G GC++ C+C G CD ++G+C+C G+
Sbjct: 1413 GPGFYGQACEHSCPSGFHG-----PGCQRVCECQQ-G----APCDPVSGQCLCPAGFHGQ 1462
Query: 143 NCER-CLPGYYGDPTDGGTCYYQC 165
CE+ C G +GD G C QC
Sbjct: 1463 FCEKGCESGSFGD---G--CLQQC 1481
Score = 151 (58.2 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 43/140 (30%), Positives = 56/140 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVH 76
+ SL + C G P C C GWTG+ +CS C C N TC
Sbjct: 523 DCSLTCDDCRNGGTCFPGQDGCDCPEGWTGIICNETCPPDTFGKNCSSPCTCQNGGTCDP 582
Query: 77 GIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECI 134
+G C C +G HC+ C G YG + CRK C C + G C + G C+
Sbjct: 583 VLGAC-RCPPGVSGAHCEDGCPKGFYG-----KHCRKKCHCANRGR-----CHRLYGACL 631
Query: 135 CQDNTQGKNCE-RCLPGYYG 153
C G+ C C P +G
Sbjct: 632 CDPGLYGRFCHLACPPWAFG 651
Score = 150 (57.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 42/128 (32%), Positives = 56/128 (43%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
+ LC C GY +GP C+ C G+ G C C C + + C H G C W
Sbjct: 890 SGLCL--CEAGY-EGP---RCEQSCRQGYYGPSCEQKCRCEHGAACDHVSGACTCPAGWR 943
Query: 89 TGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNC-E 145
G C++ C AG +G DC+S N G CD++TG CIC G C +
Sbjct: 944 -GSFCEHACPAGFFG----------LDCDSACNCSAGAPCDAVTGSCICPAGRWGPRCAQ 992
Query: 146 RCLPGYYG 153
C P +G
Sbjct: 993 SCPPLTFG 1000
Score = 144 (55.7 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 39/122 (31%), Positives = 52/122 (42%)
Query: 39 IYGYCK-GPPDYSCQCELGWT----GVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C P +CE G G C + C C N C G C W G HC
Sbjct: 1320 VSGACICSPGKTGVRCEHGCPQDRFGKGCELKCACRNGGLCHATNGSCSCPLGWM-GPHC 1378
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GY 151
++ C AG YG A E C C ++G+ C+ TG C+C G+ CE P G+
Sbjct: 1379 EHACPAGRYGAACLLE----CFCQNNGS-----CEPTTGACLCGPGFYGQACEHSCPSGF 1429
Query: 152 YG 153
+G
Sbjct: 1430 HG 1431
Score = 140 (54.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 35/97 (36%), Positives = 45/97 (46%)
Query: 59 GVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDCN 116
G++CS C C N ++C G C W G C Q C G YG + C+ C C
Sbjct: 1000 GLNCSQICTCFNGASCDSVTGQCHCAPGWM-GPTCLQACPPGLYG-----KNCQHSCLCR 1053
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYY 152
+ G CD I G+C C + G CE CLPG+Y
Sbjct: 1054 NGGR-----CDPILGQCTCPEGWTGLACENECLPGHY 1085
Score = 139 (54.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 40/124 (32%), Positives = 53/124 (42%)
Query: 39 IYGYCKGPP-----DYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDH 92
+ G C PP D C G G+ C C C + ++C G C C G
Sbjct: 758 VTGECLCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTC-LCLPGFVGSR 816
Query: 93 CQ-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLP 149
CQ C AG YG GC+ +C C + G+ CD TG C C G +C+R C
Sbjct: 817 CQDTCSAGWYGT-----GCQIRCACANDGH-----CDPTTGRCSCAPGWTGLSCQRACDS 866
Query: 150 GYYG 153
G++G
Sbjct: 867 GHWG 870
Score = 136 (52.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 43/148 (29%), Positives = 58/148 (39%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGIGICDE------ 83
KC+ G P +C C G+ G DCS+ C C + C G CD
Sbjct: 1267 KCLNGGTCDPATGACYCPAGFLGADCSLACPQGRFGPSCAHVCACRQGAA-CDPVSGACI 1325
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQG 141
C TG C++ C +G +GC KC C + G G+C + G C C G
Sbjct: 1326 CSPGKTGVRCEHGCPQDRFG-----KGCELKCACRN-G----GLCHATNGSCSCPLGWMG 1375
Query: 142 KNCERCLP-GYYGDPTDGGTCYYQCMAR 168
+CE P G YG C +C +
Sbjct: 1376 PHCEHACPAGRYG-----AACLLECFCQ 1398
Score = 132 (51.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 42/144 (29%), Positives = 62/144 (43%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C+ PP S C+ C G+ G C C C N C G C C G C
Sbjct: 583 VLGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHCANRGRCHRLYGAC-LCDPGLYGRFC 641
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGY 151
C ++G +++ C C+ SH S C+ G C C+ QG+ C+ C G+
Sbjct: 642 HLACPPWAFGPGCSED-CL-CE-QSHTRS----CNPKDGSCSCKAGFQGERCQAECESGF 694
Query: 152 YGDPTDGGTCYYQCMAR-GMLTGP 174
+G P G C ++C + G+ P
Sbjct: 695 FG-P--G--CRHRCTCQPGVACDP 713
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 36/113 (31%), Positives = 47/113 (41%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C P + C+ CE G G C C C+ C G+C C TG C
Sbjct: 1449 VSGQCLCPAGFHGQFCEKGCESGSFGDGCLQQCNCHTGVPCDPISGLC-LCPPGRTGAAC 1507
Query: 94 QY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
CR G +G GC +CDC + CD I+G+C C D+ G C
Sbjct: 1508 DLDCRRGRFG-----PGCALRCDCGGGAD-----CDPISGQCHCVDSYMGPTC 1550
Score = 127 (49.8 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 35/119 (29%), Positives = 49/119 (41%)
Query: 46 PPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTTGDHCQYCRA 98
P D SC C+ G+ G C C C + TC G+ CD +G+ C
Sbjct: 670 PKDGSCSCKAGFQGERCQAECESGFFGPGCRHRCTCQPGVA-CDP----VSGECRTQCPP 724
Query: 99 GSYGNATTQE---GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
G G QE G +C+ + V C +TGEC+C G++C C G +G
Sbjct: 725 GYQGEDCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGADCPEGRWG 783
Score = 125 (49.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 40/121 (33%), Positives = 53/121 (43%)
Query: 41 GYCK-GPPDY--SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C GP Y +C+ C G+ G C C C + C G C C G C+
Sbjct: 1408 GACLCGPGFYGQACEHSCPSGFHGPGCQRVCECQQGAPCDPVSGQC-LCPAGFHGQFCEK 1466
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCER-CLPGYY 152
C +GS+G +GC + CN H GV CD I+G C+C G C+ C G +
Sbjct: 1467 GCESGSFG-----DGCLQ-QCNCH----TGVPCDPISGLCLCPPGRTGAACDLDCRRGRF 1516
Query: 153 G 153
G
Sbjct: 1517 G 1517
Score = 71 (30.1 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEIC 332
CP N +C + +C CPP TG C E+ C
Sbjct: 1181 CPTNASCHHVTGECRCPPGFTGLSC-EQAC 1209
Score = 70 (29.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 300 SCPDKCP-ENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C C C + +C+CPP +TG DC + CP
Sbjct: 743 NCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGAD-CP 778
Score = 67 (28.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C + +C + C CPP GP C E+ CP
Sbjct: 1138 CRKGASCHHVTGACFCPPGWRGPHC-EQACP 1167
Score = 66 (28.3 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 16/29 (55%), Positives = 17/29 (58%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP R GP C E IC +C LN GTCD
Sbjct: 1253 CPSGRYGPGC-EHIC--KC---LNGGTCD 1275
Score = 64 (27.6 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 17/63 (26%), Positives = 23/63 (36%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEF---LNHGTCDLLLTGVHI 354
C C + C+CP R GP C + CP C + N +CD + H
Sbjct: 966 CSAGAPCDAVTGSCICPAGRWGPRCAQS-CPPLTFGLNCSQICTCFNGASCDSVTGQCHC 1024
Query: 355 THG 357
G
Sbjct: 1025 APG 1027
Score = 62 (26.9 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE 335
C + C ++ C+C P +TG C E CP +
Sbjct: 1311 CRQGAACDPVSGACICSPGKTGVRC-EHGCPQD 1342
Score = 62 (26.9 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 19/55 (34%), Positives = 23/55 (41%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP-----NEC-HEFL--NHGTCDLLL 349
C +C + QC C P GP C + CP C H L N G CD +L
Sbjct: 1009 CFNGASCDSVTGQCHCAPGWMGPTCLQA-CPPGLYGKNCQHSCLCRNGGRCDPIL 1062
Score = 62 (26.9 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 20/61 (32%), Positives = 24/61 (39%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEIC 332
K+GV H G P + F ++ C C C N C CP GP C E C
Sbjct: 1330 KTGVRCEH---GCPQDRFGKGCEL-KCA--CRNGGLCHATNGSCSCPLGWMGPHC-EHAC 1382
Query: 333 P 333
P
Sbjct: 1383 P 1383
Score = 61 (26.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 21/71 (29%), Positives = 29/71 (40%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQV 364
C T ++ Q C GPDC I P C HG CD + +G+ + Y+
Sbjct: 851 CAPGWTGLSCQRACDSGHWGPDC---IHPCNCSA--GHGNCDAV-SGLCLCEAG---YEG 901
Query: 365 DLIRCTCRQVY 375
+CRQ Y
Sbjct: 902 PRCEQSCRQGY 912
Score = 60 (26.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 20/56 (35%), Positives = 22/56 (39%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE----CH---EFLNHGTCDLLLTG 351
C C I QC CP TG C+ E P C L+ G CD L TG
Sbjct: 1052 CRNGGRCDPILGQCTCPEGWTGLACENECLPGHYAAGCQLNCSCLHGGICDRL-TG 1106
Score = 60 (26.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 20/73 (27%), Positives = 28/73 (38%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVHITHGRTL- 360
C +T + + CP R G C+ + C N CH +C L G H H
Sbjct: 1326 CSPGKTGVRCEHGCPQDRFGKGCELKCACRNGGLCHATNGSCSCPLGWMGPHCEHACPAG 1385
Query: 361 HYQVD-LIRCTCR 372
Y L+ C C+
Sbjct: 1386 RYGAACLLECFCQ 1398
Score = 58 (25.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 17/60 (28%), Positives = 23/60 (38%)
Query: 305 CPENRTC--INNQC--VCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTL 360
C C ++ +C CPP G DC +E CP G+C + H G L
Sbjct: 705 CQPGVACDPVSGECRTQCPPGYQGEDCGQE-CPVGTFGVNCSGSCSCVGAPCHRVTGECL 763
Score = 56 (24.8 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 312 INNQCVCPPRRTGPDC 327
I+ C+CPP RTG C
Sbjct: 1492 ISGLCLCPPGRTGAAC 1507
Score = 56 (24.8 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEE 330
C CPE R + Q +CP G C E
Sbjct: 773 CGADCPEGRWGLGCQEICPACEHGASCNPE 802
Score = 55 (24.4 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNE 335
+CP T ++ + C P G DC+ CP E
Sbjct: 1195 RCPPGFTGLSCEQACQPGTFGKDCEHLCQCPGE 1227
Score = 55 (24.4 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 19/72 (26%), Positives = 27/72 (37%)
Query: 268 GYEVLEAKSGVMTIH--YKQGKPSEGFNATYQIFSCPDKC--PENRTC--INNQCVCPPR 321
G+ +A SG+ Y+ + + Y SC KC C ++ C CP
Sbjct: 882 GHGNCDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCEQKCRCEHGAACDHVSGACTCPAG 941
Query: 322 RTGPDCQEEICP 333
G C E CP
Sbjct: 942 WRGSFC-EHACP 952
Score = 50 (22.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 12/32 (37%), Positives = 12/32 (37%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
KC TC C CP G DC CP
Sbjct: 1267 KCLNGGTCDPATGACYCPAGFLGADCSLA-CP 1297
Score = 49 (22.3 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 318 CPPRRTGPDCQEEICPNECH 337
CPP GP C E+ + H
Sbjct: 645 CPPWAFGPGCSEDCLCEQSH 664
Score = 48 (22.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQE 329
+C + C ++ QC+CP G C++
Sbjct: 1439 ECQQGAPCDPVSGQCLCPAGFHGQFCEK 1466
Score = 46 (21.3 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQ 328
C C + C+CP TG CQ
Sbjct: 1095 CLHGGICDRLTGHCLCPAGWTGDKCQ 1120
Score = 46 (21.3 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQE 329
C C I+ QC C GP C+E
Sbjct: 1526 CGGGADCDPISGQCHCVDSYMGPTCRE 1552
Score = 45 (20.9 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 301 CPDKCPENRTCI--NNQCVCPPRRTGPDCQE 329
CP C +C C+C P G CQ+
Sbjct: 790 CP-ACEHGASCNPETGTCLCLPGFVGSRCQD 819
Score = 42 (19.8 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 318 CPPRRTGPDCQEEICPNECHE 338
CP GP CQ +C EC +
Sbjct: 1425 CPSGFHGPGCQR-VC--ECQQ 1442
Score = 39 (18.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 9/23 (39%), Positives = 9/23 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDC 327
CP RT C R GP C
Sbjct: 1498 CPPGRTGAACDLDCRRGRFGPGC 1520
>UNIPROTKB|F1MNT4 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 EMBL:DAAA02010597 EMBL:DAAA02010596 IPI:IPI01017612
Ensembl:ENSBTAT00000015166 OMA:NTWQLAS Uniprot:F1MNT4
Length = 1798
Score = 204 (76.9 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 46/124 (37%), Positives = 59/124 (47%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
S C ++C G+ P D C+ C N + C G C +C T G+
Sbjct: 965 SRC-DECASGFFGNPSDVGGTCQ----PCQCHHNIDTADPEACDKETGRCLKCLYHTEGE 1019
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCN------SHGNSVLGVCDSITGECICQDNTQGKNCE 145
HCQ CR G YG+A Q+ CRKC CN H N CD TG+C+C N G+NC+
Sbjct: 1020 HCQLCRFGYYGDALRQD-CRKCVCNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCD 1078
Query: 146 RCLP 149
RC P
Sbjct: 1079 RCAP 1082
Score = 202 (76.2 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 46/132 (34%), Positives = 63/132 (47%)
Query: 49 YSCQCEL---GWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNA 104
Y+ QC+ G+ G C CN H+ C G C C D+TTG +C+ C AG YG+
Sbjct: 859 YTRQCDRCLPGFWGFPSCQPCQCNGHADDCDSVTGECLSCQDYTTGHNCERCLAGYYGDP 918
Query: 105 TTQEG--CRKCDCNS---HGNSVLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGDP 155
G CR C C G C D ++ + C+C G C+ C G++G+P
Sbjct: 919 VIGSGDHCRPCPCPDGPESGRQFASSCYQDPVSLQLACVCNPGYIGSRCDECASGFFGNP 978
Query: 156 TD-GGTCY-YQC 165
+D GGTC QC
Sbjct: 979 SDVGGTCQPCQC 990
Score = 183 (69.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/81 (45%), Positives = 43/81 (53%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQD 137
G C C C C G +G + C+ C CN H + CDS+TGEC+ CQD
Sbjct: 850 GQC-HCFQGVYTRQCDRCLPGFWGFPS----CQPCQCNGHADD----CDSVTGECLSCQD 900
Query: 138 NTQGKNCERCLPGYYGDPTDG 158
T G NCERCL GYYGDP G
Sbjct: 901 YTTGHNCERCLAGYYGDPVIG 921
Score = 181 (68.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 37/108 (34%), Positives = 54/108 (50%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+S L TG+ C + + S C G C +C G C C G++G +
Sbjct: 772 FSISALLHQTGLACECDPQGSLSSVCDPNGGQC-QCRPNVVGRRCDRCAPGTFGFGPS-- 828
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
GC+ C+C+ G SV CD ITG+C C + C+RCLPG++G P+
Sbjct: 829 GCKPCECHLQG-SVSAFCDPITGQCHCFQGVYTRQCDRCLPGFWGFPS 875
Score = 171 (65.3 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 67 LCNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVL 123
+C++++ G+ G C C + G+HC C+ G YG +A GC+ C CN G
Sbjct: 422 ICDSYTDFSAGLIAGQC-RCKLYVEGEHCDICKEGFYGLSAEDPFGCKSCACNPLGTIPG 480
Query: 124 G-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G CDS TG C C+ G++C++CLP ++G D C
Sbjct: 481 GNPCDSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGC 519
Score = 160 (61.4 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 42/136 (30%), Positives = 59/136 (43%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVD-CSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
LC I C + Q G TG D CS + + +C G C C G
Sbjct: 1067 LCLPNVIGQNCDRCAPNTWQLASG-TGCDPCSCDAAHSFGPSCNEFTGQC-HCMPGFGGR 1124
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
C C+ +G+ + + CR CDC+ G CD TG+C+C + +G C++C GY
Sbjct: 1125 TCSECQELFWGDPSVE--CRACDCDPRGIET-PQCDQSTGQCVCVEGVEGPRCDKCTRGY 1181
Query: 152 YGDPTDGGTCYYQCMA 167
G D C+ QC A
Sbjct: 1182 SGVFPDCTPCH-QCFA 1196
Score = 158 (60.7 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 45/159 (28%), Positives = 69/159 (43%)
Query: 29 FNASLCYNKCIYG-YCKGPPDYSCQCELGWTGVDCS-----VNCLCNNHSTCVHGIGICD 82
F+A L +C Y +G ++ C+ G+ G+ +C CN T + G CD
Sbjct: 429 FSAGLIAGQCRCKLYVEG--EHCDICKEGFYGLSAEDPFGCKSCACNPLGT-IPGGNPCD 485
Query: 83 E------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
C TG HC C +G + +GCR CDC+ G ++ C + +G+C+C+
Sbjct: 486 SETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDI-GGALNNSCSAESGQCLCR 544
Query: 137 DNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPG 175
+ G+ C GYY D +Y A GPG
Sbjct: 545 PHMIGRQCSEVESGYYFTTLD----HYIYEAEEANFGPG 579
Score = 138 (53.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSV-LGVCDSITGECI-CQDNTQ 140
C+ G C C +G +GN + G C+ C C+ + ++ CD TG C+ C +T+
Sbjct: 958 CNPGYIGSRCDECASGFFGNPSDVGGTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTE 1017
Query: 141 GKNCERCLPGYYGD 154
G++C+ C GYYGD
Sbjct: 1018 GEHCQLCRFGYYGD 1031
Score = 137 (53.3 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 48/159 (30%), Positives = 71/159 (44%)
Query: 10 LTTAKDDAL-SRCTVLLLYIFNASLCYNKCIYG--YCKGPPDYSCQCELGWTGVDCSVNC 66
L T D+ L SR + Y + Y+ + G +C G ++ +C GV+ V
Sbjct: 252 LHTLGDNLLDSRMEIREKYYYAV---YDMVVRGNCFCYG---HASECA-PVDGVNEEVEG 304
Query: 67 LCNNHSTCVHGI-GI-CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV-- 122
+ + H C H G+ C++C D+ H R N+ C+KC+CN H +S
Sbjct: 305 MVHGHCMCRHNTKGLNCEQCMDFY---HDLPWRPAEGRNSNA---CKKCNCNEHSSSCHF 358
Query: 123 -----LGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
L + G C CQ NT G+NCE+C P YY P
Sbjct: 359 DMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHP 397
Score = 49 (22.3 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGT-CD 346
C ++T QC+C P G +C + PN L GT CD
Sbjct: 1057 CQCDKT--TGQCLCLPNVIGQNC-DRCAPNTWQ--LASGTGCD 1094
Score = 49 (22.3 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 308 NRTCI--NNQCVCPPRRTGPDCQE 329
N +C + QC+C P G C E
Sbjct: 531 NNSCSAESGQCLCRPHMIGRQCSE 554
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQE 329
C ++ + CVC P G C E
Sbjct: 945 CYQDPVSLQLACVCNPGYIGSRCDE 969
Score = 40 (19.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 301 CPDKCPENRTCINN--QCVCPPRRTGPDCQE 329
C + E C + QCVC GP C +
Sbjct: 1146 CDPRGIETPQCDQSTGQCVCVEGVEGPRCDK 1176
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 16/56 (28%), Positives = 20/56 (35%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQV--DLIRC 369
C C P T P N C + C L+TG H H+ + DL C
Sbjct: 470 CACNPLGTIPG------GNPCDSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGC 519
Score = 37 (18.1 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 315 QCVCPPR---RTGPDCQE 329
QC C P RT +CQE
Sbjct: 1114 QCHCMPGFGGRTCSECQE 1131
Score = 37 (18.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 178 GLGSGLAERNAWE 190
G G G+ +AWE
Sbjct: 732 GSGDGVVTNSAWE 744
>ZFIN|ZDB-GENE-030131-230 [details] [associations]
symbol:si:ch211-241e1.3 "si:ch211-241e1.3"
species:7955 "Danio rerio" [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 ZFIN:ZDB-GENE-030131-230 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 EMBL:AL935300 GO:GO:0005606
GeneTree:ENSGT00700000104042 IPI:IPI00484822
Ensembl:ENSDART00000058281 ArrayExpress:F1R4X8 Bgee:F1R4X8
Uniprot:F1R4X8
Length = 1368
Score = 202 (76.2 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 50/141 (35%), Positives = 67/141 (47%)
Query: 64 VNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDC---NSHG 119
V C CN HS C G C C D T G C+ C+ G Y + ++ C C C N
Sbjct: 124 VPCSCNGHSNECEENTGRCLNCADNTAGQRCELCKEGFYWSEARRK-CTACPCPLGNQDN 182
Query: 120 NSVLGVCDSITG-ECICQDNTQGKNCERCLPGYYGDP-TDGGTCYYQCMARGMLTGPGPQ 177
N +G ++ + +C+C+ G+ CERC GYYGDP GG C C G L
Sbjct: 183 NFAVGCTETQSRIQCVCKTGHAGERCERCASGYYGDPLVYGGGCR-PCRCAGNLCDSK-- 239
Query: 178 GLGSGLAERNAWEGKDTPSRE 198
+G A RN+ E +DT + E
Sbjct: 240 ---TG-ACRNSLELQDTNTEE 256
>UNIPROTKB|F1PYQ8 [details] [associations]
symbol:MEGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 EMBL:AAEX03003878 EMBL:AAEX03003879
Ensembl:ENSCAFT00000030970 Uniprot:F1PYQ8
Length = 1573
Score = 182 (69.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 46/130 (35%), Positives = 60/130 (46%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCS-------------VNCLCNNHSTCVHGIGICDECHDW 87
G C D SC C LGWTG +C + C C N+ TC G C C
Sbjct: 1355 GLCHAS-DGSCSCGLGWTGPNCEQACPPGHYGAACRLECSCQNNGTCEPTTGAC-RCGPG 1412
Query: 88 TTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G CQ+ C G +G GCR C+C HG S CD ++G+C+C G+ CE
Sbjct: 1413 FYGQACQHACPPGFHG-----AGCRAACECQ-HGAS----CDPVSGQCVCPAGFYGQLCE 1462
Query: 146 R-CLPGYYGD 154
+ C PG +G+
Sbjct: 1463 KGCEPGSFGE 1472
Score = 172 (65.6 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 47/132 (35%), Positives = 58/132 (43%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C P Y CQ C GW G C + C C N C G C WT G CQ
Sbjct: 801 GACLCRPGYVGSRCQDTCPAGWFGPGCQMRCSCANDGLCHPVTGHCSCAPGWT-GLSCQR 859
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
C G +G + C C S G+ G CD+++G C+C+ G CE RC G++G
Sbjct: 860 ACDGGRWG----PDCSHPCTC-SPGH---GSCDAVSGLCVCEAGYTGPRCEQRCPQGHFG 911
Query: 154 DPTDGGTCYYQC 165
P G C QC
Sbjct: 912 -PGCGRQC--QC 920
Score = 163 (62.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 92/330 (27%), Positives = 123/330 (37%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C P ++ CQ C G GV C +C C +TC H G C C G C+
Sbjct: 1103 GRCLCPAGWTGDQCQSLCAEGTFGVRCEEHCACRRGATCHHVTGAC-LCPPGWRGSRCEN 1161
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
C G +G A Q +C C G C +TGEC C G CE+ C PG +G
Sbjct: 1162 ACPHGWFGEACAQ----RCQCPP-G----AACHHVTGECRCPRGFTGPGCEQACPPGTFG 1212
Query: 154 DPTDGGTCYYQCMARGMLTGPG------PQGL-GSGLAERNAWEGKDTPSRE--CLWIIG 204
+ G C+ C P G GSG +R G+ P E C + G
Sbjct: 1213 ESC-GQKCH--CPGENQACHPALGTCVCAAGYHGSGCRQRCP-PGRFGPGCEQPCGCLNG 1268
Query: 205 QSLDSNSTA---PADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGG--THQSTTLGV 259
S D+ + A PA L D ++ C + + G V G T T
Sbjct: 1269 GSCDAATGACLCPAGF----LGADCSLSCPQG--HFGPGCAH-VCGCGQAVTCDPVTGSC 1321
Query: 260 FC---TEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQC 316
C T H + + + GV H + +A+ SC C T N +
Sbjct: 1322 ACPPGTTGTHCEHGCPQNRFGVNCEHVCSCRNGGLCHASDG--SC--SCGLGWTGPNCEQ 1377
Query: 317 VCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CPP G C+ E C C N+GTC+
Sbjct: 1378 ACPPGHYGAACRLE-C--SCQ---NNGTCE 1401
Score = 160 (61.4 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 45/143 (31%), Positives = 61/143 (42%)
Query: 34 CYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
C++ + G C PP + C+ C GW G C+ C C + C H G C C
Sbjct: 1141 CHH--VTGACLCPPGWRGSRCENACPHGWFGEACAQRCQCPPGAACHHVTGEC-RCPRGF 1197
Query: 89 TGDHC-QYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-E 145
TG C Q C G++G E C +KC C + C G C+C G C +
Sbjct: 1198 TGPGCEQACPPGTFG-----ESCGQKCHCPGENQA----CHPALGTCVCAAGYHGSGCRQ 1248
Query: 146 RCLPGYYG----DPT---DGGTC 161
RC PG +G P +GG+C
Sbjct: 1249 RCPPGRFGPGCEQPCGCLNGGSC 1271
Score = 150 (57.9 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 43/119 (36%), Positives = 56/119 (47%)
Query: 44 KGPP-DYSCQCELGWTGVDCSVNCLCNNHSTC--VHGIGICDECH---DWTTGDHC-QYC 96
+GP D +C G +CS C C N ++C VHG +CH W G C + C
Sbjct: 983 QGPRCDQACPAHT--YGHNCSQTCSCFNGASCDPVHG-----QCHCGPGWM-GSTCLEAC 1034
Query: 97 RAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
GSYG + C+ C C HG G CD ++G C C + G CE CLPG +G
Sbjct: 1035 PTGSYG-----QNCQHTCLCQ-HG----GTCDPVSGHCTCPEGWTGLACEEECLPGRFG 1083
Score = 147 (56.8 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 52/186 (27%), Positives = 77/186 (41%)
Query: 34 CYN--KC--IYGYCKGPPDY---SC--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C+N C ++G C P + +C C G G +C CLC + TC G C C
Sbjct: 1006 CFNGASCDPVHGQCHCGPGWMGSTCLEACPTGSYGQNCQHTCLCQHGGTCDPVSGHCT-C 1064
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
+ TG C+ C G +G GC+ C C + G+ CD +G C+C G
Sbjct: 1065 PEGWTGLACEEECLPGRFG-----AGCKHSCRCLNGGD-----CDRRSGRCLCPAGWTGD 1114
Query: 143 NCER-CLPGYYGDPTD-------GGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDT 194
C+ C G +G + G TC++ + L PG +G A + W G+
Sbjct: 1115 QCQSLCAEGTFGVRCEEHCACRRGATCHH--VTGACLCPPGWRGSRCENACPHGWFGEAC 1172
Query: 195 PSR-EC 199
R +C
Sbjct: 1173 AQRCQC 1178
Score = 145 (56.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 42/138 (30%), Positives = 57/138 (41%)
Query: 30 NASL---CYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHG 77
N SL C N C + G C+ PP C+ C G+ G C C C N C
Sbjct: 564 NCSLSCGCQNGGTCDPVTGACRCPPGVGGTRCEDGCPKGFYGKQCHKKCHCANRGRCHRL 623
Query: 78 IGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
G C C G C C ++G ++E C C N++ CD G C C+
Sbjct: 624 YGAC-LCDPGLYGRFCHLACPPWAFGPGCSEE----CQCEQQ-NTL--ACDRRDGSCSCK 675
Query: 137 DNTQGKNCE-RCLPGYYG 153
QG+ C+ C PG++G
Sbjct: 676 AGFQGERCQDECAPGFFG 693
Score = 144 (55.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 45/139 (32%), Positives = 58/139 (41%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
+ LC C GY GP C+ C G G C C C + + C H G C W
Sbjct: 887 SGLCV--CEAGYT-GP---RCEQRCPQGHFGPGCGRQCQCEHGAACDHVSGACTCPAGWR 940
Query: 89 TGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
G C+ C AG +G CR CDC + G CDS++G C+C QG C++
Sbjct: 941 -GALCERACPAGFFGL-----DCRGVCDCAA-G----APCDSVSGSCLCPAGRQGPRCDQ 989
Query: 147 CLPGYYGDPTDGGTCYYQC 165
P + T G C C
Sbjct: 990 ACPAH----TYGHNCSQTC 1004
Score = 142 (55.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 56/177 (31%), Positives = 72/177 (40%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
C +C GY D +C G GV+CS +C C + C G C C TGD C
Sbjct: 715 CEKQCPAGYQGKGCDQ--ECPAGTFGVNCSGSCYCGG-APCNRVTGQC-LCPPGKTGDDC 770
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGY 151
C G +G QE C C+ HG C+ TG C+C+ G C+ C G+
Sbjct: 771 GADCPEGRWGLGC-QEICPACE---HG----AACEPGTGACLCRPGYVGSRCQDTCPAGW 822
Query: 152 YGDPTDGGTCYYQCMARGM---LTG-----PGPQGLGSGLA-ERNAWEGKDTPSREC 199
+G P C C G+ +TG PG GL A + W G D S C
Sbjct: 823 FG-PGCQMRC--SCANDGLCHPVTGHCSCAPGWTGLSCQRACDGGRW-GPDC-SHPC 874
Score = 137 (53.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 39/115 (33%), Positives = 51/115 (44%)
Query: 59 GVDCSVNCL-CNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDC 115
G DCS+ C C N C+ G+ CD C + TG C + C ++G + C C C
Sbjct: 518 GQDCSLTCDDCRNGGACLPGLDGCD-CPEGWTGLICNETCPPDTFG-----KNCSLSCGC 571
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYGDPTDGGTCYYQCMARG 169
+ G G CD +TG C C G CE C G+YG C+ C RG
Sbjct: 572 QN-G----GTCDPVTGACRCPPGVGGTRCEDGCPKGFYGKQCHK-KCH--CANRG 618
Score = 135 (52.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 46/158 (29%), Positives = 60/158 (37%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVH 76
+ SL + C G P C C GWTG+ +CS++C C N TC
Sbjct: 520 DCSLTCDDCRNGGACLPGLDGCDCPEGWTGLICNETCPPDTFGKNCSLSCGCQNGGTCDP 579
Query: 77 GIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECI 134
G C C G C+ C G YG C +KC C + G C + G C+
Sbjct: 580 VTGAC-RCPPGVGGTRCEDGCPKGFYGKQ-----CHKKCHCANRGR-----CHRLYGACL 628
Query: 135 CQDNTQGKNCE-RCLPGYYGDPTDGGTCYYQCMARGML 171
C G+ C C P +G P C QC + L
Sbjct: 629 CDPGLYGRFCHLACPPWAFG-PGCSEEC--QCEQQNTL 663
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 39/128 (30%), Positives = 53/128 (41%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C P + C+ CE G G C +C C + C G C C TG C
Sbjct: 1446 VSGQCVCPAGFYGQLCEKGCEPGSFGEGCREHCDCEMGAACDPITGQC-LCPPGRTGATC 1504
Query: 94 QY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
CR +G GC +C C G + CD ++G+C C D G C++ PG+
Sbjct: 1505 DLDCRPDFFG-----PGCALRCSCG--GGAA---CDPVSGQCRCVDGYMGPTCQQGEPGF 1554
Query: 152 YGD-PTDG 158
G P G
Sbjct: 1555 QGGGPQPG 1562
Score = 111 (44.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 35/118 (29%), Positives = 47/118 (39%)
Query: 48 DYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
D SC C+ G+ G C C C TC G+ CD +G + C AG
Sbjct: 669 DGSCSCKAGFQGERCQDECAPGFFGPGCLQACTCPQGVA-CDPI----SGQCEKQCPAGY 723
Query: 101 YGNATTQEGCRK--CDCNSHGNSVLG--VCDSITGECICQDNTQGKNCER-CLPGYYG 153
G QE C N G+ G C+ +TG+C+C G +C C G +G
Sbjct: 724 QGKGCDQE-CPAGTFGVNCSGSCYCGGAPCNRVTGQCLCPPGKTGDDCGADCPEGRWG 780
Score = 104 (41.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 37/119 (31%), Positives = 50/119 (42%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQE-GC 110
C G+ G+DC C C + C G C C G C Q C A +YG+ +Q C
Sbjct: 948 CPAGFFGLDCRGVCDCAAGAPCDSVSGSC-LCPAGRQGPRCDQACPAHTYGHNCSQTCSC 1006
Query: 111 -RKCDCNS-HGNSVLGVCDSITGECI--CQDNTQGKNCER-CLPGYYG--DPTDGG-TC 161
C+ HG G + C+ C + G+NC+ CL + G DP G TC
Sbjct: 1007 FNGASCDPVHGQCHCGP-GWMGSTCLEACPTGSYGQNCQHTCLCQHGGTCDPVSGHCTC 1064
Score = 75 (31.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 306 PENRTCINNQCVCPPRRTGPDCQEEICP 333
P NR + QC+CPP +TG DC + CP
Sbjct: 751 PCNR--VTGQCLCPPGKTGDDCGAD-CP 775
Score = 72 (30.4 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 19/51 (37%), Positives = 22/51 (43%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE----C-HEF--LNHGTCD 346
C TC ++ C CP TG C+EE P C H LN G CD
Sbjct: 1049 CQHGGTCDPVSGHCTCPEGWTGLACEEECLPGRFGAGCKHSCRCLNGGDCD 1099
Score = 69 (29.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
C C I QC+CPP RTG C + P+
Sbjct: 1480 CEMGAACDPITGQCLCPPGRTGATCDLDCRPD 1511
Score = 65 (27.9 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C ++ C+CP R GP C ++ CP + TC
Sbjct: 963 CAAGAPCDSVSGSCLCPAGRQGPRC-DQACPAHTYGHNCSQTC 1004
Score = 61 (26.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 300 SCPDKC-PENRTC--INNQCVCPPRRTGPDCQEEICP 333
S P C P + +C ++ CVC TGP C++ CP
Sbjct: 871 SHPCTCSPGHGSCDAVSGLCVCEAGYTGPRCEQR-CP 906
Score = 60 (26.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 312 INNQC--VCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGV 352
+ ++C CP GP CQ C N+ CH H +C TG+
Sbjct: 810 VGSRCQDTCPAGWFGPGCQMRCSCANDGLCHPVTGHCSCAPGWTGL 855
Score = 59 (25.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
C T ++ Q C R GPDC P C HG+CD
Sbjct: 848 CAPGWTGLSCQRACDGGRWGPDCSH---PCTCSP--GHGSCD 884
Score = 56 (24.8 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 19/52 (36%), Positives = 22/52 (42%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN-----EC-HEFL-NHG-TCD 346
C +C ++ QC C P G C E CP C H L HG TCD
Sbjct: 1006 CFNGASCDPVHGQCHCGPGWMGSTCLEA-CPTGSYGQNCQHTCLCQHGGTCD 1056
Score = 56 (24.8 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 291 GFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLN-HGTCDL 347
GF+ +C +C +C ++ QCVCP G C++ P E H C++
Sbjct: 1425 GFHGAGCRAAC--ECQHGASCDPVSGQCVCPAGFYGQLCEKGCEPGSFGEGCREHCDCEM 1482
Score = 54 (24.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CPP GP C EE C +C + N CD
Sbjct: 642 CPPWAFGPGCSEE-C--QCEQ-QNTLACD 666
Score = 53 (23.7 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 19/63 (30%), Positives = 25/63 (39%)
Query: 300 SCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPN-----ECHEFLNHGTCDLLLTGV 352
SC +C C + +C+CP TG CQ +C C E H C T
Sbjct: 1089 SC--RCLNGGDCDRRSGRCLCPAGWTGDQCQS-LCAEGTFGVRCEE---HCACRRGATCH 1142
Query: 353 HIT 355
H+T
Sbjct: 1143 HVT 1145
Score = 52 (23.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQ 328
C CPE R + Q +CP G C+
Sbjct: 770 CGADCPEGRWGLGCQEICPACEHGAACE 797
Score = 52 (23.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 301 CPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
CP C C C+C P G CQ+ CP
Sbjct: 787 CP-ACEHGAACEPGTGACLCRPGYVGSRCQDT-CP 819
Score = 46 (21.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQE 329
C C ++ QC C GP CQ+
Sbjct: 1523 CGGGAACDPVSGQCRCVDGYMGPTCQQ 1549
Score = 42 (19.8 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 9/23 (39%), Positives = 9/23 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDC 327
CP RT C P GP C
Sbjct: 1495 CPPGRTGATCDLDCRPDFFGPGC 1517
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 313 NNQCVCPPRRTGPDCQEEICP 333
+ C C G CQ+E P
Sbjct: 669 DGSCSCKAGFQGERCQDECAP 689
>UNIPROTKB|F1PYQ7 [details] [associations]
symbol:MEGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 OMA:RIEMEVI EMBL:AAEX03003878
EMBL:AAEX03003879 Ensembl:ENSCAFT00000030971 Uniprot:F1PYQ7
Length = 1604
Score = 182 (69.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 46/130 (35%), Positives = 60/130 (46%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCS-------------VNCLCNNHSTCVHGIGICDECHDW 87
G C D SC C LGWTG +C + C C N+ TC G C C
Sbjct: 1390 GLCHAS-DGSCSCGLGWTGPNCEQACPPGHYGAACRLECSCQNNGTCEPTTGAC-RCGPG 1447
Query: 88 TTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G CQ+ C G +G GCR C+C HG S CD ++G+C+C G+ CE
Sbjct: 1448 FYGQACQHACPPGFHG-----AGCRAACECQ-HGAS----CDPVSGQCVCPAGFYGQLCE 1497
Query: 146 R-CLPGYYGD 154
+ C PG +G+
Sbjct: 1498 KGCEPGSFGE 1507
Score = 172 (65.6 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 47/132 (35%), Positives = 58/132 (43%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C P Y CQ C GW G C + C C N C G C WT G CQ
Sbjct: 836 GACLCRPGYVGSRCQDTCPAGWFGPGCQMRCSCANDGLCHPVTGHCSCAPGWT-GLSCQR 894
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
C G +G + C C S G+ G CD+++G C+C+ G CE RC G++G
Sbjct: 895 ACDGGRWG----PDCSHPCTC-SPGH---GSCDAVSGLCVCEAGYTGPRCEQRCPQGHFG 946
Query: 154 DPTDGGTCYYQC 165
P G C QC
Sbjct: 947 -PGCGRQC--QC 955
Score = 163 (62.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 92/330 (27%), Positives = 123/330 (37%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C P ++ CQ C G GV C +C C +TC H G C C G C+
Sbjct: 1138 GRCLCPAGWTGDQCQSLCAEGTFGVRCEEHCACRRGATCHHVTGAC-LCPPGWRGSRCEN 1196
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
C G +G A Q +C C G C +TGEC C G CE+ C PG +G
Sbjct: 1197 ACPHGWFGEACAQ----RCQCPP-G----AACHHVTGECRCPRGFTGPGCEQACPPGTFG 1247
Query: 154 DPTDGGTCYYQCMARGMLTGPG------PQGL-GSGLAERNAWEGKDTPSRE--CLWIIG 204
+ G C+ C P G GSG +R G+ P E C + G
Sbjct: 1248 ESC-GQKCH--CPGENQACHPALGTCVCAAGYHGSGCRQRCP-PGRFGPGCEQPCGCLNG 1303
Query: 205 QSLDSNSTA---PADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGG--THQSTTLGV 259
S D+ + A PA L D ++ C + + G V G T T
Sbjct: 1304 GSCDAATGACLCPAGF----LGADCSLSCPQG--HFGPGCAH-VCGCGQAVTCDPVTGSC 1356
Query: 260 FC---TEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQC 316
C T H + + + GV H + +A+ SC C T N +
Sbjct: 1357 ACPPGTTGTHCEHGCPQNRFGVNCEHVCSCRNGGLCHASDG--SC--SCGLGWTGPNCEQ 1412
Query: 317 VCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CPP G C+ E C C N+GTC+
Sbjct: 1413 ACPPGHYGAACRLE-C--SCQ---NNGTCE 1436
Score = 163 (62.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 48/137 (35%), Positives = 63/137 (45%)
Query: 41 GYCK-GPPDY--SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C+ GP Y +CQ C G+ G C C C + ++C G C C G C+
Sbjct: 1440 GACRCGPGFYGQACQHACPPGFHGAGCRAACECQHGASCDPVSGQC-VCPAGFYGQLCEK 1498
Query: 96 -CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYY 152
C GS+G EGCR+ CDC G CD ITG+C+C G C+ C P ++
Sbjct: 1499 GCEPGSFG-----EGCREHCDCEM-G----AACDPITGQCLCPPGRTGATCDLDCRPDFF 1548
Query: 153 GDPTDGGTCYYQCMARG 169
G P G C +C G
Sbjct: 1549 G-P---G-CALRCSCGG 1560
Score = 160 (61.4 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 45/143 (31%), Positives = 61/143 (42%)
Query: 34 CYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
C++ + G C PP + C+ C GW G C+ C C + C H G C C
Sbjct: 1176 CHH--VTGACLCPPGWRGSRCENACPHGWFGEACAQRCQCPPGAACHHVTGEC-RCPRGF 1232
Query: 89 TGDHC-QYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-E 145
TG C Q C G++G E C +KC C + C G C+C G C +
Sbjct: 1233 TGPGCEQACPPGTFG-----ESCGQKCHCPGENQA----CHPALGTCVCAAGYHGSGCRQ 1283
Query: 146 RCLPGYYG----DPT---DGGTC 161
RC PG +G P +GG+C
Sbjct: 1284 RCPPGRFGPGCEQPCGCLNGGSC 1306
Score = 150 (57.9 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 43/119 (36%), Positives = 56/119 (47%)
Query: 44 KGPP-DYSCQCELGWTGVDCSVNCLCNNHSTC--VHGIGICDECH---DWTTGDHC-QYC 96
+GP D +C G +CS C C N ++C VHG +CH W G C + C
Sbjct: 1018 QGPRCDQACPAHT--YGHNCSQTCSCFNGASCDPVHG-----QCHCGPGWM-GSTCLEAC 1069
Query: 97 RAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
GSYG + C+ C C HG G CD ++G C C + G CE CLPG +G
Sbjct: 1070 PTGSYG-----QNCQHTCLCQ-HG----GTCDPVSGHCTCPEGWTGLACEEECLPGRFG 1118
Score = 147 (56.8 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 52/186 (27%), Positives = 77/186 (41%)
Query: 34 CYN--KC--IYGYCKGPPDY---SC--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C+N C ++G C P + +C C G G +C CLC + TC G C C
Sbjct: 1041 CFNGASCDPVHGQCHCGPGWMGSTCLEACPTGSYGQNCQHTCLCQHGGTCDPVSGHCT-C 1099
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
+ TG C+ C G +G GC+ C C + G+ CD +G C+C G
Sbjct: 1100 PEGWTGLACEEECLPGRFG-----AGCKHSCRCLNGGD-----CDRRSGRCLCPAGWTGD 1149
Query: 143 NCER-CLPGYYGDPTD-------GGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDT 194
C+ C G +G + G TC++ + L PG +G A + W G+
Sbjct: 1150 QCQSLCAEGTFGVRCEEHCACRRGATCHH--VTGACLCPPGWRGSRCENACPHGWFGEAC 1207
Query: 195 PSR-EC 199
R +C
Sbjct: 1208 AQRCQC 1213
Score = 145 (56.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 42/138 (30%), Positives = 57/138 (41%)
Query: 30 NASL---CYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHG 77
N SL C N C + G C+ PP C+ C G+ G C C C N C
Sbjct: 599 NCSLSCGCQNGGTCDPVTGACRCPPGVGGTRCEDGCPKGFYGKQCHKKCHCANRGRCHRL 658
Query: 78 IGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
G C C G C C ++G ++E C C N++ CD G C C+
Sbjct: 659 YGAC-LCDPGLYGRFCHLACPPWAFGPGCSEE----CQCEQQ-NTL--ACDRRDGSCSCK 710
Query: 137 DNTQGKNCE-RCLPGYYG 153
QG+ C+ C PG++G
Sbjct: 711 AGFQGERCQDECAPGFFG 728
Score = 144 (55.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 45/139 (32%), Positives = 58/139 (41%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
+ LC C GY GP C+ C G G C C C + + C H G C W
Sbjct: 922 SGLCV--CEAGYT-GP---RCEQRCPQGHFGPGCGRQCQCEHGAACDHVSGACTCPAGWR 975
Query: 89 TGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
G C+ C AG +G CR CDC + G CDS++G C+C QG C++
Sbjct: 976 -GALCERACPAGFFGL-----DCRGVCDCAA-G----APCDSVSGSCLCPAGRQGPRCDQ 1024
Query: 147 CLPGYYGDPTDGGTCYYQC 165
P + T G C C
Sbjct: 1025 ACPAH----TYGHNCSQTC 1039
Score = 142 (55.0 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 56/177 (31%), Positives = 72/177 (40%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
C +C GY D +C G GV+CS +C C + C G C C TGD C
Sbjct: 750 CEKQCPAGYQGKGCDQ--ECPAGTFGVNCSGSCYCGG-APCNRVTGQC-LCPPGKTGDDC 805
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGY 151
C G +G QE C C+ HG C+ TG C+C+ G C+ C G+
Sbjct: 806 GADCPEGRWGLGC-QEICPACE---HG----AACEPGTGACLCRPGYVGSRCQDTCPAGW 857
Query: 152 YGDPTDGGTCYYQCMARGM---LTG-----PGPQGLGSGLA-ERNAWEGKDTPSREC 199
+G P C C G+ +TG PG GL A + W G D S C
Sbjct: 858 FG-PGCQMRC--SCANDGLCHPVTGHCSCAPGWTGLSCQRACDGGRW-GPDC-SHPC 909
Score = 137 (53.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/115 (33%), Positives = 51/115 (44%)
Query: 59 GVDCSVNCL-CNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDC 115
G DCS+ C C N C+ G+ CD C + TG C + C ++G + C C C
Sbjct: 553 GQDCSLTCDDCRNGGACLPGLDGCD-CPEGWTGLICNETCPPDTFG-----KNCSLSCGC 606
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYGDPTDGGTCYYQCMARG 169
+ G G CD +TG C C G CE C G+YG C+ C RG
Sbjct: 607 QN-G----GTCDPVTGACRCPPGVGGTRCEDGCPKGFYGKQCHK-KCH--CANRG 653
Score = 135 (52.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 46/158 (29%), Positives = 60/158 (37%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVH 76
+ SL + C G P C C GWTG+ +CS++C C N TC
Sbjct: 555 DCSLTCDDCRNGGACLPGLDGCDCPEGWTGLICNETCPPDTFGKNCSLSCGCQNGGTCDP 614
Query: 77 GIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECI 134
G C C G C+ C G YG C +KC C + G C + G C+
Sbjct: 615 VTGAC-RCPPGVGGTRCEDGCPKGFYGKQ-----CHKKCHCANRGR-----CHRLYGACL 663
Query: 135 CQDNTQGKNCE-RCLPGYYGDPTDGGTCYYQCMARGML 171
C G+ C C P +G P C QC + L
Sbjct: 664 CDPGLYGRFCHLACPPWAFG-PGCSEEC--QCEQQNTL 698
Score = 111 (44.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 35/118 (29%), Positives = 47/118 (39%)
Query: 48 DYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
D SC C+ G+ G C C C TC G+ CD +G + C AG
Sbjct: 704 DGSCSCKAGFQGERCQDECAPGFFGPGCLQACTCPQGVA-CDPI----SGQCEKQCPAGY 758
Query: 101 YGNATTQEGCRK--CDCNSHGNSVLG--VCDSITGECICQDNTQGKNCER-CLPGYYG 153
G QE C N G+ G C+ +TG+C+C G +C C G +G
Sbjct: 759 QGKGCDQE-CPAGTFGVNCSGSCYCGGAPCNRVTGQCLCPPGKTGDDCGADCPEGRWG 815
Score = 104 (41.7 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 37/119 (31%), Positives = 50/119 (42%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQE-GC 110
C G+ G+DC C C + C G C C G C Q C A +YG+ +Q C
Sbjct: 983 CPAGFFGLDCRGVCDCAAGAPCDSVSGSC-LCPAGRQGPRCDQACPAHTYGHNCSQTCSC 1041
Query: 111 -RKCDCNS-HGNSVLGVCDSITGECI--CQDNTQGKNCER-CLPGYYG--DPTDGG-TC 161
C+ HG G + C+ C + G+NC+ CL + G DP G TC
Sbjct: 1042 FNGASCDPVHGQCHCGP-GWMGSTCLEACPTGSYGQNCQHTCLCQHGGTCDPVSGHCTC 1099
Score = 75 (31.5 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 306 PENRTCINNQCVCPPRRTGPDCQEEICP 333
P NR + QC+CPP +TG DC + CP
Sbjct: 786 PCNR--VTGQCLCPPGKTGDDCGAD-CP 810
Score = 72 (30.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 19/51 (37%), Positives = 22/51 (43%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE----C-HEF--LNHGTCD 346
C TC ++ C CP TG C+EE P C H LN G CD
Sbjct: 1084 CQHGGTCDPVSGHCTCPEGWTGLACEEECLPGRFGAGCKHSCRCLNGGDCD 1134
Score = 69 (29.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN 334
C C I QC+CPP RTG C + P+
Sbjct: 1515 CEMGAACDPITGQCLCPPGRTGATCDLDCRPD 1546
Score = 65 (27.9 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C ++ C+CP R GP C ++ CP + TC
Sbjct: 998 CAAGAPCDSVSGSCLCPAGRQGPRC-DQACPAHTYGHNCSQTC 1039
Score = 61 (26.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 300 SCPDKC-PENRTC--INNQCVCPPRRTGPDCQEEICP 333
S P C P + +C ++ CVC TGP C++ CP
Sbjct: 906 SHPCTCSPGHGSCDAVSGLCVCEAGYTGPRCEQR-CP 941
Score = 60 (26.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 312 INNQC--VCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGV 352
+ ++C CP GP CQ C N+ CH H +C TG+
Sbjct: 845 VGSRCQDTCPAGWFGPGCQMRCSCANDGLCHPVTGHCSCAPGWTGL 890
Score = 59 (25.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
C T ++ Q C R GPDC P C HG+CD
Sbjct: 883 CAPGWTGLSCQRACDGGRWGPDCSH---PCTCSP--GHGSCD 919
Score = 56 (24.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 19/52 (36%), Positives = 22/52 (42%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN-----EC-HEFL-NHG-TCD 346
C +C ++ QC C P G C E CP C H L HG TCD
Sbjct: 1041 CFNGASCDPVHGQCHCGPGWMGSTCLEA-CPTGSYGQNCQHTCLCQHGGTCD 1091
Score = 56 (24.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 291 GFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLN-HGTCDL 347
GF+ +C +C +C ++ QCVCP G C++ P E H C++
Sbjct: 1460 GFHGAGCRAAC--ECQHGASCDPVSGQCVCPAGFYGQLCEKGCEPGSFGEGCREHCDCEM 1517
Score = 54 (24.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CPP GP C EE C +C + N CD
Sbjct: 677 CPPWAFGPGCSEE-C--QCEQ-QNTLACD 701
Score = 53 (23.7 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 19/63 (30%), Positives = 25/63 (39%)
Query: 300 SCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPN-----ECHEFLNHGTCDLLLTGV 352
SC +C C + +C+CP TG CQ +C C E H C T
Sbjct: 1124 SC--RCLNGGDCDRRSGRCLCPAGWTGDQCQS-LCAEGTFGVRCEE---HCACRRGATCH 1177
Query: 353 HIT 355
H+T
Sbjct: 1178 HVT 1180
Score = 52 (23.4 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQ 328
C CPE R + Q +CP G C+
Sbjct: 805 CGADCPEGRWGLGCQEICPACEHGAACE 832
Score = 52 (23.4 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 301 CPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
CP C C C+C P G CQ+ CP
Sbjct: 822 CP-ACEHGAACEPGTGACLCRPGYVGSRCQDT-CP 854
Score = 46 (21.3 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQE 329
C C ++ QC C GP CQ+
Sbjct: 1558 CGGGAACDPVSGQCRCVDGYMGPTCQQ 1584
Score = 42 (19.8 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 9/23 (39%), Positives = 9/23 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDC 327
CP RT C P GP C
Sbjct: 1530 CPPGRTGATCDLDCRPDFFGPGC 1552
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 313 NNQCVCPPRRTGPDCQEEICP 333
+ C C G CQ+E P
Sbjct: 704 DGSCSCKAGFQGERCQDECAP 724
>MGI|MGI:97364 [details] [associations]
symbol:Notch2 "notch 2" species:10090 "Mus musculus"
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0001709 "cell fate determination" evidence=ISO;TAS] [GO:0001890
"placenta development" evidence=IMP] [GO:0001947 "heart looping"
evidence=IGI] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IMP] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IGI] [GO:0003184 "pulmonary valve morphogenesis"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=ISO;IC]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IGI]
[GO:0007050 "cell cycle arrest" evidence=ISO] [GO:0007219 "Notch
signaling pathway" evidence=IC;TAS] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0008285 "negative regulation
of cell proliferation" evidence=ISO] [GO:0009887 "organ
morphogenesis" evidence=TAS] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016049 "cell growth"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IGI] [GO:0042060 "wound
healing" evidence=IDA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IGI] [GO:0045672 "positive regulation
of osteoclast differentiation" evidence=IDA] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=ISO]
[GO:0046849 "bone remodeling" evidence=ISO] [GO:0050793 "regulation
of developmental process" evidence=IEA] [GO:0051059 "NF-kappaB
binding" evidence=IPI] [GO:0060413 "atrial septum morphogenesis"
evidence=ISO] [GO:0060674 "placenta blood vessel development"
evidence=IMP] [GO:0070986 "left/right axis specification"
evidence=IGI] [GO:0072602 "interleukin-4 secretion" evidence=IGI]
Reactome:REACT_81380 InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
MGI:MGI:97364 GO:GO:0005829 GO:GO:0005634 GO:GO:0005576
GO:GO:0008285 GO:GO:0009986 GO:GO:0005887 GO:GO:0006355
GO:GO:0002437 eggNOG:COG0666 GO:GO:0016049 GO:GO:0001701
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 GO:GO:0007050
GO:GO:0006351 Reactome:REACT_115202 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0043065 GO:GO:0030326 PROSITE:PS01186
GO:GO:0042060 PROSITE:PS00010 GO:GO:0001947 GO:GO:0070986
GO:GO:0006959 GO:GO:0072014 GO:GO:0001709 GO:GO:0046579
GO:GO:0072104 GO:GO:0072015 GO:GO:0045672 GO:GO:0060413
GO:GO:0060674 GO:GO:0002011 GO:GO:0072602 SUPFAM:SSF90193
HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4853 OrthoDB:EOG4Q58NH
ChiTaRS:NOTCH2 InterPro:IPR022336 PRINTS:PR01985 EMBL:D32210
EMBL:X68279 EMBL:U31881 IPI:IPI00467908 IPI:IPI00621767 PIR:A49175
RefSeq:NP_035058.2 UniGene:Mm.485843 ProteinModelPortal:O35516
SMR:O35516 DIP:DIP-6008N IntAct:O35516 STRING:O35516
PhosphoSite:O35516 PaxDb:O35516 PRIDE:O35516 GeneID:18129
KEGG:mmu:18129 UCSC:uc008qpo.1 InParanoid:O35516 NextBio:293360
CleanEx:MM_NOTCH2 Genevestigator:O35516
GermOnline:ENSMUSG00000027878 Uniprot:O35516
Length = 2470
Score = 192 (72.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 90/335 (26%), Positives = 128/335 (38%)
Query: 36 NKCIYGYCKGP-PDYSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGD 91
N CI+G C G Y C C+ GW GV+C V+ CL N C +G G C+ G
Sbjct: 725 NPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDKNECLSN---PCQNG-GTCNNL---VNGY 777
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLP 149
C C+ G G Q +C N N G C D ++G C C GKNC+ L
Sbjct: 778 RCT-CKKGFKGY-NCQVNIDECASNPCLNQ--GTCFDDVSGYTCHCMLPYTGKNCQTVLA 833
Query: 150 GYYGDPTDGGTCYYQCM---ARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECL--WIIG 204
+P + + + L PG QG +R + + S+ C+ +
Sbjct: 834 PCSPNPCENAAVCKEAPNFESFSCLCAPGWQG------KRCTVDVDECISKPCMNNGVCH 887
Query: 205 QSLDSN-STAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTE 263
+ S P + + DIN C N D V + +G C
Sbjct: 888 NTQGSYVCECPPGFSGMDCEEDIN-DCLANPCQNGGSCVDHVNTFSCQCHPGFIGDKCQT 946
Query: 264 DMHRGYEVLEAKSGVMTIH---YKQGKPSEGFNATY---QIFSCPDK-CPENRTCINN-- 314
DM+ G + + Y P+ GF+ + I C + C TC++
Sbjct: 947 DMNECLSEPCKNGGTCSDYVNSYTCTCPA-GFHGVHCENNIDECTESSCFNGGTCVDGIN 1005
Query: 315 --QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
C+CP TGP C +I NEC + LN GTC
Sbjct: 1006 SFSCLCPVGFTGPFCLHDI--NECSSNPCLNAGTC 1038
Score = 144 (55.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 83/332 (25%), Positives = 123/332 (37%)
Query: 37 KCIYG-YCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
+C +G C P Y CQC G+TG C + CV+G G C + D+T C
Sbjct: 191 RCQHGGTCLNLPGSYRCQCGQGFTGQHCDSPYV--RGLPCVNG-GTCRQTGDFTL--ECN 245
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCERCLPGYY 152
C G G+ T + DC +H GVC D + T C C G+ C +
Sbjct: 246 -CLPGFEGS-TCERNID--DCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECL 301
Query: 153 GDPT---DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDS 209
P +GGTC + G + G G + TP C+ +
Sbjct: 302 LQPNACQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAYASCTPGSTCIDRVASFSCL 361
Query: 210 NSTAPADIILLRLQPDINVPCNENAVYIYDGLP-DFVTSVGGTHQSTTLGVFCTED---- 264
A ++ I+ PC++ A+ + L ++ + ++ G CTED
Sbjct: 362 CPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYK----GADCTEDVDEC 417
Query: 265 -MHRGYEVLEAKSGVMT---IHYKQGKPSEGFNATYQIFSC-PDKCPENRTCINN----Q 315
M A V T H + K G I C D C + TC++
Sbjct: 418 AMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFT 477
Query: 316 CVCPPRRTGPDCQEEICPNECHE--FLNHGTC 345
C+C P G C+ E+ NEC +N+G C
Sbjct: 478 CLCMPGFKGVHCELEV--NECQSNPCVNNGQC 507
Score = 138 (53.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 90/335 (26%), Positives = 122/335 (36%)
Query: 36 NKCIY-GYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
N C+ G C + + C C G+TG C ++ + + C++G +C D G C
Sbjct: 499 NPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGA----KCIDHPNGYEC 554
Query: 94 QYCRAGSYGNATTQEGCRKCD---CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
Q C G G E CD C+ HG G+ DS T CIC G C +
Sbjct: 555 Q-CATGFTG-ILCDENIDNCDPDPCH-HGQCQDGI-DSYT--CICNPGYMGAICSDQIDE 608
Query: 151 YYGDPT-DGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIG 204
Y P + G C YQC + PG GL E N + P + + G
Sbjct: 609 CYSSPCLNDGRCIDLVNGYQCNCQ-----PGTSGLN---CEINFDDCASNPCMHGVCVDG 660
Query: 205 QSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDF--VTSVGGTHQSTTLG 258
+ S +P R DI+ PC + A I D + F + G H S
Sbjct: 661 INRYSCVCSPG-FTGQRCNIDIDECASNPCRKGATCIND-VNGFRCICPEGPHHPSCYSQ 718
Query: 259 VF-CTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSC-PDKCPENRTCIN--N 314
V C + SG + G G N C + C TC N N
Sbjct: 719 VNECLSNPCIHGNCTGGLSGYKCL-CDAGWV--GVNCEVDKNECLSNPCQNGGTCNNLVN 775
Query: 315 --QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
+C C G +CQ I +EC + LN GTC
Sbjct: 776 GYRCTCKKGFKGYNCQVNI--DECASNPCLNQGTC 808
Score = 132 (51.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 44/150 (29%), Positives = 56/150 (37%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KCI P Y CQC G+TG+ C N + C HG +C D
Sbjct: 539 CLNGAKCI----DHPNGYECQCATGFTGILCDENIDNCDPDPCHHG-----QCQDGIDSY 589
Query: 92 HCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCL 148
C C G G + + C C + G + D + G +C CQ T G NCE
Sbjct: 590 TC-ICNPGYMGAICSDQIDECYSSPCLNDGRCI----DLVNGYQCNCQPGTSGLNCEINF 644
Query: 149 PGYYGDPTDGGTCY-----YQCMARGMLTG 173
+P G C Y C+ TG
Sbjct: 645 DDCASNPCMHGVCVDGINRYSCVCSPGFTG 674
Score = 128 (50.1 bits), Expect = 0.00028, P = 0.00028
Identities = 93/371 (25%), Positives = 141/371 (38%)
Query: 34 CYNKCIYGYCKGPPDY---SCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTT 89
C N + CK P++ SC C GW G C+V+ C + C++ G+C H+ T
Sbjct: 840 CENAAV---CKEAPNFESFSCLCAPGWQGKRCTVDVDECIS-KPCMNN-GVC---HN-TQ 890
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCERC 147
G + C G + +E C N N G C D + T C C G C+
Sbjct: 891 GSYVCECPPG-FSGMDCEEDINDCLANPCQNG--GSCVDHVNTFSCQCHPGFIGDKCQTD 947
Query: 148 LPGYYGDPT-DGGTC--Y---YQCMARGMLTGPGPQGLGSGLAERNAWEG----KDTPSR 197
+ +P +GGTC Y Y C G + E + + G S
Sbjct: 948 MNECLSEPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTESSCFNGGTCVDGINSF 1007
Query: 198 ECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDF--VTSVGGTHQST 255
CL +G T P L + + PC NA DGL + + +G T ++
Sbjct: 1008 SCLCPVG------FTGP--FCLHDINECSSNPCL-NAGTCVDGLGTYRCICPLGYTGKNC 1058
Query: 256 -TLGVFCTED--MHRGYEVLE-AKSGVMTIHYKQGKPSEGFNATYQIFSC----PDK--C 305
TL C+ ++G V E A+ + G + N + + + P + C
Sbjct: 1059 QTLVNLCSRSPCKNKGTCVQEKARPHCLCPPGWDGAYCDVLNVSCKAAALQKGVPVEHLC 1118
Query: 306 PENRTCIN----NQCVCPPRRTGPDCQEEICPNECHEF-LNHG-TCDLLLTGVHIT---- 355
+ CIN + C CP TG C+E++ +EC HG TC+ + G
Sbjct: 1119 QHSGICINAGNTHHCQCPLGYTGSYCEEQL--DECASNPCQHGATCNDFIGGYRCECVPG 1176
Query: 356 -HGRTLHYQVD 365
G Y+VD
Sbjct: 1177 YQGVNCEYEVD 1187
Score = 125 (49.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 47/166 (28%), Positives = 67/166 (40%)
Query: 20 RCTVLLLYIFNASLCYNK-CIY-GYCKGPP-DYSCQCELGWTGVDCS--VN-CL---CNN 70
RCTV + C +K C+ G C Y C+C G++G+DC +N CL C N
Sbjct: 867 RCTV------DVDECISKPCMNNGVCHNTQGSYVCECPPGFSGMDCEEDINDCLANPCQN 920
Query: 71 HSTCVHGIGICD-ECHDWTTGDHCQYCRAGSYGNATTQEGCRKCD-CNSHGNSVLGVCDS 128
+CV + +CH GD CQ + N E C+ C+ + NS C +
Sbjct: 921 GGSCVDHVNTFSCQCHPGFIGDKCQ-----TDMNECLSEPCKNGGTCSDYVNSYTCTCPA 975
Query: 129 ITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGP 174
C++N C G G DG + C+ TGP
Sbjct: 976 GFHGVHCENNIDECTESSCFNG--GTCVDGINSF-SCLCPVGFTGP 1018
Score = 108 (43.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 35/118 (29%), Positives = 50/118 (42%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
Y C C++G+TG C C +H C +G C + C+ C AG G +
Sbjct: 129 YECTCQVGFTGKQCQWTDACLSHP-CENG----STCTSVASQFSCK-CPAGLTGQKCEAD 182
Query: 109 GCRKCD----CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP-TDGGTC 161
+CD C HG + L + S C C G++C+ P G P +GGTC
Sbjct: 183 -INECDIPGRCQ-HGGTCLNLPGSY--RCQCGQGFTGQHCDS--PYVRGLPCVNGGTC 234
Score = 88 (36.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCIN--N--QCVCPPRRTGPDCQEEI--CPNECHEFLNH 342
+G N Y++ C ++ C TCI+ N +C CPP G C+E I C H LN
Sbjct: 1178 QGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDECAGGPH-CLNG 1236
Query: 343 GTC 345
G C
Sbjct: 1237 GQC 1239
Score = 82 (33.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGT 344
+G + ++ C C N C++ QC+CPP TGP CQ +I LN
Sbjct: 485 KGVHCELEVNECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAK 544
Query: 345 C 345
C
Sbjct: 545 C 545
Score = 67 (28.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 291 GFNATY---QIFSCPDK-CPENRTC---INN-QCVCPPRRTGPDCQEEI--CPNE-CHEF 339
G+ +Y Q+ C C TC I +C C P G +C+ E+ C N+ C
Sbjct: 1138 GYTGSYCEEQLDECASNPCQHGATCNDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQ-- 1195
Query: 340 LNHGTC-DLL 348
N GTC DL+
Sbjct: 1196 -NGGTCIDLV 1204
Score = 62 (26.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 313 NNQCVCPPRRTGPDCQE--EICPNE-CHEFLNHGTC 345
N C+C TG C+ ++CP + C LN GTC
Sbjct: 1285 NYNCICRSAFTGRHCETFLDVCPQKPC---LNGGTC 1317
Score = 62 (26.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTGVHIT--HG-RTLHYQVDLIRC 369
+C+C G +C E+ NEC + N GTC+ L+ G T G + + QV++ C
Sbjct: 740 KCLCDAGWVGVNC--EVDKNECLSNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDEC 797
Score = 44 (20.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 24/111 (21%), Positives = 38/111 (34%)
Query: 229 PC-NENAVYIYDGLPD-FVTSVGGTHQSTTLGVFCTE-DMHRGYEVLEAKSG--VMTIHY 283
PC N + +PD F+ L C + RG + + SG ++
Sbjct: 1310 PCLNGGTCAVASNMPDGFICRCPPGFSGARLQSSCGQVKCRRGEQCIHTDSGPRCFCLNP 1369
Query: 284 KQGKPSEGFNATYQIFSC-PDKCPENRTCINNQCVCPPRRTGPDCQEEICP 333
K + N +C P + P + +C CPP G C+ P
Sbjct: 1370 KDCESGCASNPCQHGGTCYPQRQPPHYSCR-----CPPSFGGSHCELYTAP 1415
Score = 42 (19.8 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 301 CPDK-CPENRTCI--NNQ-----CVCPPRRTGPDCQEEICPNEC 336
CP K C TC +N C CPP +G Q +C
Sbjct: 1306 CPQKPCLNGGTCAVASNMPDGFICRCPPGFSGARLQSSCGQVKC 1349
>UNIPROTKB|P07942 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9606 "Homo
sapiens" [GO:0005178 "integrin binding" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=IDA;TAS] [GO:0005607 "laminin-2
complex" evidence=IDA;TAS] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0042476 "odontogenesis"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA;TAS]
[GO:0005198 "structural molecule activity" evidence=NAS]
[GO:0005606 "laminin-1 complex" evidence=IDA;TAS;IPI] [GO:0030335
"positive regulation of cell migration" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IDA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS] GO:GO:0048471
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0016477 GO:GO:0070062 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0042476 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
EMBL:CH236947 GO:GO:0050679 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 DrugBank:DB00015 GO:GO:0005201 GO:GO:0043208
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384 HOGENOM:HOG000007552
GO:GO:0005607 GO:GO:0043257 KO:K05636 InterPro:IPR013015
PROSITE:PS51116 EMBL:M61951 EMBL:M58147 EMBL:M61917 EMBL:M61918
EMBL:M61921 EMBL:M61922 EMBL:M61923 EMBL:M61924 EMBL:M61925
EMBL:M61926 EMBL:M61927 EMBL:M61928 EMBL:M61929 EMBL:M61930
EMBL:M61931 EMBL:M61932 EMBL:M61933 EMBL:M61934 EMBL:M61935
EMBL:M61936 EMBL:M61938 EMBL:M61939 EMBL:M61940 EMBL:M61941
EMBL:M61942 EMBL:M61943 EMBL:M61944 EMBL:M61945 EMBL:M61946
EMBL:M61947 EMBL:M61948 EMBL:M61949 EMBL:M61950 EMBL:M55370
EMBL:M55378 EMBL:M55365 EMBL:M55371 EMBL:M55372 EMBL:M55373
EMBL:M55374 EMBL:M55375 EMBL:M55376 EMBL:M55344 EMBL:M55345
EMBL:M55346 EMBL:M55347 EMBL:M55348 EMBL:M55349 EMBL:M55350
EMBL:M55351 EMBL:M55352 EMBL:M55353 EMBL:M55355 EMBL:M55356
EMBL:M55357 EMBL:M55358 EMBL:M55359 EMBL:M55360 EMBL:M55361
EMBL:M55362 EMBL:M55363 EMBL:M55364 EMBL:M55366 EMBL:M55367
EMBL:M55368 EMBL:M55369 EMBL:M61916 EMBL:BC113455 EMBL:M20206
IPI:IPI00013976 PIR:S13547 RefSeq:NP_002282.2 UniGene:Hs.650585
ProteinModelPortal:P07942 SMR:P07942 IntAct:P07942
MINT:MINT-2860329 STRING:P07942 PhosphoSite:P07942 DMDM:126366
PaxDb:P07942 PRIDE:P07942 Ensembl:ENST00000222399 GeneID:3912
KEGG:hsa:3912 UCSC:uc003vev.2 CTD:3912 GeneCards:GC07M107564
H-InvDB:HIX0025323 HGNC:HGNC:6486 HPA:CAB004256 HPA:HPA004056
HPA:HPA004132 MIM:150240 neXtProt:NX_P07942 PharmGKB:PA30275
HOVERGEN:HBG052301 PhylomeDB:P07942 ChiTaRS:LAMB1 GenomeRNAi:3912
NextBio:15367 ArrayExpress:P07942 Bgee:P07942 CleanEx:HS_LAMB1
Genevestigator:P07942 GermOnline:ENSG00000091136 Uniprot:P07942
Length = 1786
Score = 209 (78.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 46/124 (37%), Positives = 59/124 (47%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
S C + C GY P + C+ C N + C G C +C T G+
Sbjct: 953 SRC-DDCASGYFGNPSEVGGSCQ----PCQCHNNIDTTDPEACDKETGRCLKCLYHTEGE 1007
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCN------SHGNSVLGVCDSITGECICQDNTQGKNCE 145
HCQ+CR G YG+A Q+ CRKC CN H N CD TG+C+C N G+NC+
Sbjct: 1008 HCQFCRFGYYGDALQQD-CRKCVCNYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCD 1066
Query: 146 RCLP 149
RC P
Sbjct: 1067 RCAP 1070
Score = 187 (70.9 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 41/97 (42%), Positives = 48/97 (49%)
Query: 63 SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV 122
SVN CN + G C C C C G +G + C+ C CN H +
Sbjct: 828 SVNAFCNPVT------GQC-HCFQGVYARQCDRCLPGHWGFPS----CQPCQCNGHADD- 875
Query: 123 LGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDG 158
CD +TGEC+ CQD T G NCERCL GYYGDP G
Sbjct: 876 ---CDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIG 909
Score = 187 (70.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 45/132 (34%), Positives = 61/132 (46%)
Query: 49 YSCQCEL---GWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNA 104
Y+ QC+ G G C CN H+ C G C C D+T G +C+ C AG YG+
Sbjct: 847 YARQCDRCLPGHWGFPSCQPCQCNGHADDCDPVTGECLNCQDYTMGHNCERCLAGYYGDP 906
Query: 105 TTQEG--CRKCDCNS---HGNSVLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGDP 155
G CR C C G C D +T + C+C G C+ C GY+G+P
Sbjct: 907 IIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGYFGNP 966
Query: 156 TD-GGTCY-YQC 165
++ GG+C QC
Sbjct: 967 SEVGGSCQPCQC 978
Score = 173 (66.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+S L TG+ C + + S C G C +C G C C G++G +
Sbjct: 760 FSISALLHQTGLACECDPQGSLSSVCDPNGGQC-QCRPNVVGRTCNRCAPGTFGFGPS-- 816
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
GC+ C+C+ G SV C+ +TG+C C + C+RCLPG++G P+
Sbjct: 817 GCKPCECHLQG-SVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPS 863
Score = 162 (62.1 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 42/136 (30%), Positives = 59/136 (43%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVD-CSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
LC I C + Q G TG D C+ N + +C G C +C G
Sbjct: 1055 LCLPNVIGQNCDRCAPNTWQLASG-TGCDPCNCNAAHSFGPSCNEFTGQC-QCMPGFGGR 1112
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
C C+ +G+ + CR CDC+ G CD TG+C+C + +G C++C GY
Sbjct: 1113 TCSECQELFWGDPDVE--CRACDCDPRGIET-PQCDQSTGQCVCVEGVEGPRCDKCTRGY 1169
Query: 152 YGDPTDGGTCYYQCMA 167
G D C+ QC A
Sbjct: 1170 SGVFPDCTPCH-QCFA 1184
Score = 158 (60.7 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 33/99 (33%), Positives = 51/99 (51%)
Query: 67 LCNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYGNATTQE-GCRKCDCNSHGNSVL 123
+C++++ G+ G C C G+HC C+ G Y ++ GC+ C CN G
Sbjct: 410 ICDSYTDFSTGLIAGQC-RCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGTIPG 468
Query: 124 G-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G CDS TG C C+ G++C++CLP ++G D C
Sbjct: 469 GNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGC 507
Score = 158 (60.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 44/167 (26%), Positives = 71/167 (42%)
Query: 30 NASLC---YNKCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECH 85
N LC Y+ + +G +C+ C + C + + V G G+CD+C
Sbjct: 308 NCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSISCHFDMAVYLATGNVSG-GVCDDCQ 366
Query: 86 DWTTGDHCQYCRAGSYGNATTQ----EGCRKCDCNSHGNSVLGVCDSIT--------GEC 133
T G +C+ C+ Y + C +C C+ G+ G+CDS T G+C
Sbjct: 367 HNTMGRNCEQCKPFYYQHPERDIRDPNFCERCTCDPAGSQNEGICDSYTDFSTGLIAGQC 426
Query: 134 ICQDNTQGKNCERCLPGYYG----DPTDGGTCYYQCMARGMLTGPGP 176
C+ N +G++C+ C G+Y DP +C C G + G P
Sbjct: 427 RCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSC--ACNPLGTIPGGNP 471
Score = 155 (59.6 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 37/117 (31%), Positives = 52/117 (44%)
Query: 65 NCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
+C CN T + G CD C TG HC C +G + +GCR CDC+
Sbjct: 457 SCACNPLGT-IPGGNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDL- 514
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPG 175
G ++ C + +G+C C+ + G+ C PGYY D +Y A GPG
Sbjct: 515 GGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYYFATLD----HYLYEAEEANLGPG 567
Score = 136 (52.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSV-LGVCDSITGECI-CQDNTQ 140
C G C C +G +GN + G C+ C C+++ ++ CD TG C+ C +T+
Sbjct: 946 CDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTE 1005
Query: 141 GKNCERCLPGYYGD 154
G++C+ C GYYGD
Sbjct: 1006 GEHCQFCRFGYYGD 1019
Score = 50 (22.7 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 308 NRTCI--NNQCVCPPRRTGPDCQEEICPNECHEFLNH 342
N +C + QC C P G C E + P L+H
Sbjct: 519 NNSCFAESGQCSCRPHMIGRQCNE-VEPGYYFATLDH 554
Score = 48 (22.0 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT-CD 346
QC+C P G +C + PN L GT CD
Sbjct: 1053 QCLCLPNVIGQNC-DRCAPNTWQ--LASGTGCD 1082
Score = 46 (21.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 17/56 (30%), Positives = 20/56 (35%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQV--DLIRC 369
C C P T P N C H C L+TG H H+ + DL C
Sbjct: 458 CACNPLGTIPG------GNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGC 507
Score = 41 (19.5 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQE 329
C ++ + CVC P G C +
Sbjct: 933 CYQDPVTLQLACVCDPGYIGSRCDD 957
Score = 40 (19.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 301 CPDKCPENRTCINN--QCVCPPRRTGPDCQE 329
C + E C + QCVC GP C +
Sbjct: 1134 CDPRGIETPQCDQSTGQCVCVEGVEGPRCDK 1164
Score = 38 (18.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 315 QCVCPPR---RTGPDCQE 329
QC C P RT +CQE
Sbjct: 1102 QCQCMPGFGGRTCSECQE 1119
Score = 37 (18.1 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 178 GLGSGLAERNAWE 190
G G G+ +AWE
Sbjct: 720 GSGDGVVTNSAWE 732
>UNIPROTKB|F1MAP4 [details] [associations]
symbol:Megf10 "Protein Megf10" species:10116 "Rattus
norvegicus" [GO:0001891 "phagocytic cup" evidence=IEA] [GO:0014719
"satellite cell activation" evidence=IEA] [GO:0014816 "satellite
cell differentiation" evidence=IEA] [GO:0014841 "satellite cell
proliferation" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 RGD:735084
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147 CTD:84466
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AC095558
IPI:IPI00371424 RefSeq:NP_001094127.1 UniGene:Rn.224926
Ensembl:ENSRNOT00000037901 GeneID:291445 KEGG:rno:291445
NextBio:632612 Uniprot:F1MAP4
Length = 1145
Score = 186 (70.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 63/199 (31%), Positives = 82/199 (41%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSV-------------NCLCNNHSTCVHGIGI 80
C +KC++G C P +CQCE GW G +CS C C N + C G
Sbjct: 109 CADKCVHGRCIAPN--TCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNRALCNPITGA 166
Query: 81 CDECHDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C C G C+ C G+YGN Q +C C + G CD ITGEC C
Sbjct: 167 C-HCAAGYRGWRCEDRCEQGTYGNDCHQ----RCQCQN-G----ATCDHITGECRCSPGY 216
Query: 140 QGKNCER-CLPGYYGDPTD-------GGTCYYQCMARGMLTGP-GPQGLGSGLAERNAWE 190
G CE C PG +G + GG C++ G + P G G G
Sbjct: 217 TGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHH---VTGECSCPSGWMGTVCGQPCPEGRF 273
Query: 191 GKDTPSRECLWIIGQSLDS 209
GK+ S+EC G + D+
Sbjct: 274 GKNC-SQECQCHNGGACDA 291
Score = 185 (70.2 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 34 CYNK--C-IY-GYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C+N C Y G CK P ++ C +C LG+ G DC++ C C N + C H G C C
Sbjct: 718 CHNGAFCSAYDGECKCTPGWTGLYCTQRCPLGFYGKDCALVCQCQNGADCDHISGQCT-C 776
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G HC Q C AG+YG GCR+ CDC + NS CD ITG C C +G
Sbjct: 777 RTGFMGRHCEQKCPAGTYGY-----GCRQICDCLN--NST---CDHITGTCYCSPGWKGA 826
Query: 143 NCER 146
C++
Sbjct: 827 RCDQ 830
Score = 168 (64.2 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 47/144 (32%), Positives = 65/144 (45%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDE--- 83
C N + C P D SC C+ GW GVDCS++C CN C++G G C+
Sbjct: 458 CKNDAV---CS-PVDGSCICKAGWHGVDCSISCPSGTWGFGCNLTCQCLNG-GACNTLDG 512
Query: 84 ---CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C G+ C++ C+ G+YG + +CDC SH + C TG C C
Sbjct: 513 TCTCAPGWRGEKCEFPCQDGTYGLNCAE----RCDC-SHADG----CHPTTGHCRCLPGW 563
Query: 140 QGKNCER-CLPGYYGDPTDGGTCY 162
G +C+ C G +G P CY
Sbjct: 564 SGVHCDSVCAEGRWG-PNCSLPCY 586
Score = 166 (63.5 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 50/161 (31%), Positives = 67/161 (41%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N + C + I G C+ P Y+ C+ C G G C C C N C H G C C
Sbjct: 199 NGATCDH--ITGECRCSPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECS-C 255
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
G C Q C G +G +QE C C++ G G CD+ TG+C C G+
Sbjct: 256 PSGWMGTVCGQPCPEGRFGKNCSQE----CQCHN-G----GACDAATGQCHCSPGYTGER 306
Query: 144 CE-RCLPGYYGDP-------TDGGTCYY---QCMARGMLTG 173
C+ C G YG +GG CY+ C+ +G
Sbjct: 307 CQDECPVGTYGVRCAETCRCVNGGKCYHVSGTCLCEAGFSG 347
Score = 163 (62.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 47/131 (35%), Positives = 58/131 (44%)
Query: 30 NASLCYNKCIYGYCK---GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC N I G C G + C+ CE G G DC C C N +TC H G C C
Sbjct: 156 NRALC-NP-ITGACHCAAGYRGWRCEDRCEQGTYGNDCHQRCQCQNGATCDHITGEC-RC 212
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG C+ C G +G Q +C C + G GVC +TGEC C G
Sbjct: 213 SPGYTGAFCEDLCPPGKHGPQCEQ----RCPCQN-G----GVCHHVTGECSCPSGWMGTV 263
Query: 144 C-ERCLPGYYG 153
C + C G +G
Sbjct: 264 CGQPCPEGRFG 274
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 45/128 (35%), Positives = 60/128 (46%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSV---------NCL----CNNHSTCVHGIGICDECHDW 87
G C P D SCQC GW G DCS NC+ C+N + C G C +C
Sbjct: 679 GTCN-PIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGEC-KCTPG 736
Query: 88 TTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE- 145
TG +C Q C G YG ++ C C + + CD I+G+C C+ G++CE
Sbjct: 737 WTGLYCTQRCPLGFYG----KDCALVCQCQNGAD-----CDHISGQCTCRTGFMGRHCEQ 787
Query: 146 RCLPGYYG 153
+C G YG
Sbjct: 788 KCPAGTYG 795
Score = 161 (61.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 41/122 (33%), Positives = 56/122 (45%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
G C P Y+ CQ C +G GV C+ C C N C H G C C +G+ C+
Sbjct: 294 GQCHCSPGYTGERCQDECPVGTYGVRCAETCRCVNGGKCYHVSGTC-LCEAGFSGEFCEA 352
Query: 95 -YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYY 152
C G YG ++C C H ++ C ++GEC C+ G C E C PG+Y
Sbjct: 353 RLCPEGLYGIKCD----KRCPC--HLDNTHS-CHPMSGECGCKPGWSGLYCNETCSPGFY 405
Query: 153 GD 154
G+
Sbjct: 406 GE 407
Score = 153 (58.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 45/128 (35%), Positives = 57/128 (44%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ- 94
G+C+ P +S C C G G +CS+ C C N ++C GIC EC G CQ
Sbjct: 555 GHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGIC-ECAPGFRGTTCQR 613
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYG 153
C G YG+ +Q C +C H + G C ITG C C G C E C G +G
Sbjct: 614 ICSPGFYGHRCSQT-CPQC---VHSS---GPCHHITGLCDCLPGFTGALCNEVCPSGRFG 666
Query: 154 DPTDGGTC 161
G C
Sbjct: 667 KNC-AGVC 673
Score = 145 (56.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 42/120 (35%), Positives = 55/120 (45%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC--VHGIGICDECHDWTTGDHCQY 95
C G+ KG D S C LG G++CS C C N + C V G IC W D
Sbjct: 430 CAPGF-KGT-DCSTPCPLGRYGINCSSRCGCKNDAVCSPVDGSCICKA--GWHGVDCSIS 485
Query: 96 CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
C +G++G GC C C +G G C+++ G C C +G+ CE C G YG
Sbjct: 486 CPSGTWGF-----GCNLTCQC-LNG----GACNTLDGTCTCAPGWRGEKCEFPCQDGTYG 535
Score = 133 (51.9 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 42/136 (30%), Positives = 58/136 (42%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ---CELGWTGVDCSVNCLC---NNHSTCVHGIGI 80
N CY+ + G C +S C+ C G G+ C C C N HS C G
Sbjct: 328 NGGKCYH--VSGTCLCEAGFSGEFCEARLCPEGLYGIKCDKRCPCHLDNTHS-CHPMSGE 384
Query: 81 CDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDN 138
C C +G +C + C G YG E C++ C C + + CDS++G C C
Sbjct: 385 CG-CKPGWSGLYCNETCSPGFYG-----EACQQICSCQNGAD-----CDSVSGRCACAPG 433
Query: 139 TQGKNCERCLP-GYYG 153
+G +C P G YG
Sbjct: 434 FKGTDCSTPCPLGRYG 449
Score = 128 (50.1 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 48/149 (32%), Positives = 65/149 (43%)
Query: 30 NASL-CYNK----CIY--GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHST--CV 75
N SL CY K C G C+ P + +CQ C G+ G CS C HS+ C
Sbjct: 580 NCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCH 639
Query: 76 HGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGEC 133
H G+CD C TG C + C +G +G + C C C ++G C+ I C
Sbjct: 640 HITGLCD-CLPGFTGALCNEVCPSGRFG-----KNCAGVCTCTNNGT-----CNPIDRSC 688
Query: 134 ICQDNTQGKNCER-CLPGYYGDPTDGGTC 161
C G +C + C P ++G P TC
Sbjct: 689 QCYPGWIGSDCSQPCPPAHWG-PNCIHTC 716
Score = 123 (48.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 28 IFNASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICD 82
+ ++ C++ I G C P ++ C C G G +C+ C C N+ TC + I
Sbjct: 632 VHSSGPCHH--ITGLCDCLPGFTGALCNEVCPSGRFGKNCAGVCTCTNNGTC-NPIDRSC 688
Query: 83 ECHD-WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
+C+ W D Q C +G C CN H + C + GEC C G
Sbjct: 689 QCYPGWIGSDCSQPCPPAHWG-----PNCIHT-CNCHNGAF---CSAYDGECKCTPGWTG 739
Query: 142 KNC-ERCLPGYYG 153
C +RC G+YG
Sbjct: 740 LYCTQRCPLGFYG 752
Score = 65 (27.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRT 359
CP R G +C +E C +CH N G CD H + G T
Sbjct: 268 CPEGRFGKNCSQE-C--QCH---NGGACDAATGQCHCSPGYT 303
Score = 61 (26.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C C QC C P TG CQ+E CP
Sbjct: 282 QCHNGGACDAATGQCHCSPGYTGERCQDE-CP 312
Score = 60 (26.2 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 15/66 (22%), Positives = 25/66 (37%)
Query: 295 TYQIFSCPD--KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLT 350
TY + C + +C C ++ C+C +G C+ +CP + C L
Sbjct: 315 TYGV-RCAETCRCVNGGKCYHVSGTCLCEAGFSGEFCEARLCPEGLYGIKCDKRCPCHLD 373
Query: 351 GVHITH 356
H H
Sbjct: 374 NTHSCH 379
Score = 57 (25.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 289 SEGF--NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICP 333
S GF A QI SC + + ++ +C C P G DC CP
Sbjct: 401 SPGFYGEACQQICSCQNGA--DCDSVSGRCACAPGFKGTDCSTP-CP 444
Score = 57 (25.1 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNE-----CHEF---LNHGTCDLLLTG 351
+C C I+ QC C G C+++ CP C + LN+ TCD + TG
Sbjct: 760 QCQNGADCDHISGQCTCRTGFMGRHCEQK-CPAGTYGYGCRQICDCLNNSTCDHI-TG 815
Score = 56 (24.8 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 21/68 (30%), Positives = 27/68 (39%)
Query: 289 SEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEFL- 340
S GF +CP + C I C C P TG C E +CP+ C
Sbjct: 616 SPGFYGHRCSQTCPQCVHSSGPCHHITGLCDCLPGFTGALCNE-VCPSGRFGKNCAGVCT 674
Query: 341 --NHGTCD 346
N+GTC+
Sbjct: 675 CTNNGTCN 682
Score = 55 (24.4 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFSCPDKCP--ENRTC--INNQCVCPPRRTGPDCQE 329
++G M H +Q P+ TY + C C N TC I C C P G C +
Sbjct: 777 RTGFMGRHCEQKCPA----GTYG-YGCRQICDCLNNSTCDHITGTCYCSPGWKGARCDQ 830
Score = 54 (24.1 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 306 PENRTC------INNQCV--CPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVHI 354
P +R+C I + C CPP GP+C C N C + C TG++
Sbjct: 683 PIDRSCQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGECKCTPGWTGLYC 742
Query: 355 THGRTL-HYQVDL-IRCTCR 372
T L Y D + C C+
Sbjct: 743 TQRCPLGFYGKDCALVCQCQ 762
Score = 53 (23.7 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTG 351
C + C ++ C+C G DC CP+ F + TC L G
Sbjct: 458 CKNDAVCSPVDGSCICKAGWHGVDCSIS-CPSGTWGFGCNLTCQCLNGG 505
Score = 49 (22.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 301 CPDKCP---EN-RTC--INNQCVCPPRRTGPDCQEEICP 333
C +CP +N +C ++ +C C P +G C E P
Sbjct: 364 CDKRCPCHLDNTHSCHPMSGECGCKPGWSGLYCNETCSP 402
Score = 46 (21.3 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 300 SCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEIC 332
S P C +C + C C P G CQ IC
Sbjct: 582 SLPCYCKNGASCSPDDGICECAPGFRGTTCQR-IC 615
Score = 41 (19.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNECHEFLNHGTCD 346
+C + ++ VC R GP+C C N + G C+
Sbjct: 558 RCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICE 601
Score = 41 (19.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 15/57 (26%), Positives = 20/57 (35%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLL-LTGVHITHG 357
+C C ++ C C P G C E C + + CD G H T G
Sbjct: 500 QCLNGGACNTLDGTCTCAPGWRGEKC-EFPCQDGTYGLNCAERCDCSHADGCHPTTG 555
>UNIPROTKB|P24043 [details] [associations]
symbol:LAMA2 "Laminin subunit alpha-2" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0030155 GO:GO:0005198
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
Pfam:PF02210 GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
HOGENOM:HOG000293201 HOVERGEN:HBG052298 KO:K05637 GO:GO:0005606
EMBL:Z26653 EMBL:U66796 EMBL:U66733 EMBL:U66734 EMBL:U66735
EMBL:U66736 EMBL:U66737 EMBL:U66738 EMBL:U66739 EMBL:U66740
EMBL:U66741 EMBL:U66742 EMBL:U66743 EMBL:U66745 EMBL:U66746
EMBL:U66747 EMBL:U66748 EMBL:U66749 EMBL:U66750 EMBL:U66751
EMBL:U66752 EMBL:U66753 EMBL:U66754 EMBL:U66755 EMBL:U66756
EMBL:U66757 EMBL:U66758 EMBL:U66759 EMBL:U66760 EMBL:U66761
EMBL:U66762 EMBL:U66763 EMBL:U66764 EMBL:U66765 EMBL:U66766
EMBL:U66768 EMBL:U66769 EMBL:U66770 EMBL:U66771 EMBL:U66772
EMBL:U66773 EMBL:U66774 EMBL:U66775 EMBL:U66776 EMBL:U66777
EMBL:U66778 EMBL:U66779 EMBL:U66780 EMBL:U66781 EMBL:U66782
EMBL:U66783 EMBL:U66784 EMBL:U66785 EMBL:U66786 EMBL:U66787
EMBL:U66788 EMBL:U66789 EMBL:U66790 EMBL:U66791 EMBL:U66792
EMBL:U66793 EMBL:U66794 EMBL:U66795 EMBL:AL583853 EMBL:AL356124
EMBL:AL445439 EMBL:AL513527 EMBL:AL590613 EMBL:AL669984
EMBL:AL589927 EMBL:M59832 IPI:IPI00873889 PIR:PX0082
RefSeq:NP_000417.2 RefSeq:NP_001073291.1 UniGene:Hs.200841
ProteinModelPortal:P24043 SMR:P24043 DIP:DIP-42562N IntAct:P24043
MINT:MINT-2635209 STRING:P24043 PhosphoSite:P24043 DMDM:215274259
PaxDb:P24043 PRIDE:P24043 DNASU:3908 Ensembl:ENST00000421865
GeneID:3908 KEGG:hsa:3908 UCSC:uc003qbn.3 CTD:3908
GeneCards:GC06P129246 HGNC:HGNC:6482 HPA:CAB040310 MIM:156225
MIM:607855 neXtProt:NX_P24043 Orphanet:258 PharmGKB:PA30271
eggNOG:COG0419 OMA:NCNSFGS OrthoDB:EOG4RFKRM PhylomeDB:P24043
GenomeRNAi:3908 NextBio:15339 ArrayExpress:P24043 Bgee:P24043
CleanEx:HS_LAMA2 Genevestigator:P24043 GermOnline:ENSG00000196569
Uniprot:P24043
Length = 3122
Score = 201 (75.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 47/136 (34%), Positives = 68/136 (50%)
Query: 37 KCIYGYCKGP--PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+C GY P P SCQ C+ +D S+ C++ S G C C TTG +C
Sbjct: 846 RCAEGYFGQPSVPGGSCQPCQCN-DNLDFSIPGSCDSLS------GSCLICKPGTTGRYC 898
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+ C G +G+A + C+ C CN+ G S VC S TG+C C+ N QG+ C++C G +G
Sbjct: 899 ELCADGYFGDAVDAKNCQPCRCNA-GGSFSEVCHSQTGQCECRANVQGQRCDKCKAGTFG 957
Query: 154 DPTDGGTCYYQCMARG 169
+ G C + G
Sbjct: 958 LQSARGCVPCNCNSFG 973
Score = 178 (67.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 56/177 (31%), Positives = 76/177 (42%)
Query: 9 GLT-TAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL 67
G T T D + +C L Y + L C+ G+ + + G T C V C
Sbjct: 1367 GTTMTPPADLIEKCDCPLGY---SGLSCEACLPGFYRLRSQPGGRTP-GPTLGTC-VPCQ 1421
Query: 68 CNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDC----NSHGNS 121
CN HS+ C IC C T GD C+ C G YG C++C C +S+ S
Sbjct: 1422 CNGHSSLCDPETSICQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCACPLISSSNNFS 1481
Query: 122 VLGVCDSITG-ECI-CQDNTQGKNCERCLPGYYGDPTD-GGTCYY-QCMARGMLTGP 174
V + + C C +G+ CERC PGY G P + GG+C +C G L P
Sbjct: 1482 PSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVP 1538
Score = 171 (65.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 34/84 (40%), Positives = 46/84 (54%)
Query: 78 IGICDECHDWTTGDHCQYCRAGSYG-NATTQEG-CRKCDCNSHGNSVLGVCDSITGECI- 134
+ +C +C TG C+ C N T G C C C H S CD +TGEC+
Sbjct: 721 VEVC-QCPPGYTGSSCESCWPRHRRVNGTIFGGICEPCQCFGHAES----CDDVTGECLN 775
Query: 135 CQDNTQGKNCERCLPGYYGDPTDG 158
C+D+T G C++CLPG+YG+PT G
Sbjct: 776 CKDHTGGPYCDKCLPGFYGEPTKG 799
Score = 163 (62.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 42/111 (37%), Positives = 50/111 (45%)
Query: 66 CLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGN 120
C C H+ +C G C C D T G +C C G YG T T E C+ C C N N
Sbjct: 757 CQCFGHAESCDDVTGECLNCKDHTGGPYCDKCLPGFYGEPTKGTSEDCQPCACPLNIPSN 816
Query: 121 SVLGVC--DSITGE-CI-CQDNTQGKNCERCLPGYYGDPT-DGGTCY-YQC 165
+ C D G C C G CERC GY+G P+ GG+C QC
Sbjct: 817 NFSPTCHLDRSLGLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQC 867
Score = 161 (61.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 41/126 (32%), Positives = 55/126 (43%)
Query: 52 QCELGWTGVDCSVNCL-CNNHSTCVHGIGICDE-----CHDWTTGDHCQYCRAGSYGNAT 105
+C+ G G+ + C+ CN +S C+E C TG C C G Y N
Sbjct: 950 KCKAGTFGLQSARGCVPCNCNSFGSKSFD-CEESGQCWCQPGVTGKKCDRCAHG-YFNFQ 1007
Query: 106 TQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
+ GC C+C+ GN+ CD TG CIC NT G+ C +C P +G G C
Sbjct: 1008 -EGGCTACECSHLGNN----CDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGCKACNC 1062
Query: 166 MARGML 171
G L
Sbjct: 1063 STVGSL 1068
Score = 154 (59.3 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 47/159 (29%), Positives = 74/159 (46%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGV------DCSVNCLC------NNHS-TCV-HG 77
S+C N C + + G D+ +C LG+ G+ DC C C NN S +CV G
Sbjct: 1434 SICQN-CQH-HTAG--DFCERCALGYYGIVKGLPNDCQ-QCACPLISSSNNFSPSCVAEG 1488
Query: 78 IGI--CDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECI 134
+ C C G +C+ C G G+ G C++C+C+ +G S+ CD +TG C
Sbjct: 1489 LDDYRCTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYG-SLPVPCDPVTGFCT 1547
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
C+ G+ C+ C + + + C +C G+L G
Sbjct: 1548 CRPGATGRKCDGCKHWHAREGWECVFCGDECT--GLLLG 1584
Score = 137 (53.3 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 38/120 (31%), Positives = 58/120 (48%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
++C +GY ++ Q E G T +CS L NN C G C C T G+ C
Sbjct: 997 DRCAHGY------FNFQ-EGGCTACECSH--LGNN---CDPKTGRCI-CPPNTIGEKCSK 1043
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C ++G++ T GC+ C+C++ G S+ C+ TG+C C G C C G++ P
Sbjct: 1044 CAPNTWGHSITT-GCKACNCSTVG-SLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYP 1101
Score = 57 (25.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 286 GKPSEGFNATYQIFSCPDKCPENR---TCINNQCV------CPPRRTGPDCQ 328
G+P++G + Q +CP P N TC ++ + CP TGP C+
Sbjct: 794 GEPTKGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDGCPVGYTGPRCE 845
Score = 54 (24.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHIT 355
QC C P+ +G C E C + CD L G T
Sbjct: 1078 QCNCHPKFSGAKCTE--CSRGHWNYPRCNLCDCFLPGTDAT 1116
Score = 51 (23.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 315 QCVCPPRRTGPDCQEEICPN 334
+C+CPP G C + PN
Sbjct: 1029 RCICPPNTIGEKCSK-CAPN 1047
Score = 47 (21.6 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 13/53 (24%), Positives = 19/53 (35%)
Query: 314 NQCVC-PPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVD 365
N C C P C E C + TC + + G+H R + +D
Sbjct: 1104 NLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLD 1156
Score = 43 (20.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+ QC C P TG C C + F G C
Sbjct: 982 SGQCWCQPGVTGKKCDR--CAHGYFNF-QEGGC 1011
Score = 37 (18.1 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 6/12 (50%), Positives = 6/12 (50%)
Query: 316 CVCPPRRTGPDC 327
C C P TG C
Sbjct: 1546 CTCRPGATGRKC 1557
>MGI|MGI:1919351 [details] [associations]
symbol:Megf6 "multiple EGF-like-domains 6" species:10090
"Mus musculus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1919351
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 EMBL:AL627123 InterPro:IPR013111
Pfam:PF07974 InterPro:IPR026823 Pfam:PF12662
GeneTree:ENSGT00690000101691 CTD:1953 HOGENOM:HOG000097840
HOVERGEN:HBG079790 EMBL:BC031402 EMBL:BC039980 EMBL:BC058571
IPI:IPI00676714 RefSeq:NP_001156449.1 UniGene:Mm.275216
ProteinModelPortal:Q80V70 SMR:Q80V70 STRING:Q80V70
PhosphoSite:Q80V70 PRIDE:Q80V70 Ensembl:ENSMUST00000030897
GeneID:230971 KEGG:mmu:230971 UCSC:uc008wbp.2 InParanoid:Q80V70
OrthoDB:EOG4CZBF1 ChiTaRS:MEGF6 NextBio:380326 Bgee:Q80V70
CleanEx:MM_MEGF6 Genevestigator:Q80V70
GermOnline:ENSMUSG00000057751 Uniprot:Q80V70
Length = 1572
Score = 176 (67.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 38/108 (35%), Positives = 53/108 (49%)
Query: 51 CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQ 107
CQ C GW G C + C C N C G C WT G CQ C +G +G
Sbjct: 815 CQDACPAGWFGTGCQMRCACANDGHCHPATGRCSCAPGWT-GLSCQRACDSGHWG----P 869
Query: 108 EGCRKCDCNS-HGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ C+C++ HGN CD+++G C+C+ +G CE+ C GY+G
Sbjct: 870 DCIHPCNCSAGHGN-----CDAVSGLCLCEAGYEGPQCEQWCRQGYFG 912
Score = 174 (66.3 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 51/151 (33%), Positives = 65/151 (43%)
Query: 30 NASLCYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGI 80
N S C N C + G+C+ P ++ CQ C G GV C +C C +TC H G
Sbjct: 1090 NCS-CLNGGTCDRLTGHCRCPAGWTGDKCQSPCVSGMFGVHCEEHCACRKGATCHHVTGA 1148
Query: 81 CDECHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C C G HC Q C G +G A Q +C C G S C ++GEC C
Sbjct: 1149 C-LCPPGWRGSHCEQACPRGWFGEACAQ----RCHCPP-GAS----CHHVSGECHCPPGF 1198
Query: 140 QGKNCER-CLPGYYGDPTDGGTCYYQCMARG 169
G CE+ C PG +G C + C G
Sbjct: 1199 TGPGCEQACQPGTFGKD-----CEHPCQCPG 1224
Score = 170 (64.9 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 49/151 (32%), Positives = 67/151 (44%)
Query: 34 CYNKCIY---GYCKGPPDYSCQCELGWTGVDCS-------------VNCLCNNHSTCVHG 77
C +KC G C + SC C LGW G C + C C N+ +C
Sbjct: 1346 CEHKCACRNGGLCHAT-NGSCSCPLGWMGPHCEHACPAGRYGAACLLECSCQNNGSCEPT 1404
Query: 78 IGICDECHDWTTGDHCQ-YCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECIC 135
G C C G C+ C AG +G+ GC++ C+C G CD ++G C+C
Sbjct: 1405 SGAC-LCGPGFYGQACEDTCPAGFHGS-----GCQRVCECQQ-G----APCDPVSGRCLC 1453
Query: 136 QDNTQGKNCER-CLPGYYGDPTDGGTCYYQC 165
+G+ CER C PG++GD G C QC
Sbjct: 1454 PAGFRGQFCERGCKPGFFGD---G--CLQQC 1479
Score = 168 (64.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 52/167 (31%), Positives = 73/167 (43%)
Query: 30 NASLCYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGI 80
++ LC N C I G C P ++ C+ C G G C +NC C N TC G
Sbjct: 1046 HSCLCRNGGSCDPILGQCTCPEGWTGLACENECLPGHHGAGCRLNCSCLNGGTCDRLTGH 1105
Query: 81 CDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C C TGD CQ C +G +G +E C C G C +TG C+C
Sbjct: 1106 C-RCPAGWTGDKCQSPCVSGMFG-VHCEEHCA---CRK-G----ATCHHVTGACLCPPGW 1155
Query: 140 QGKNCERCLP-GYYGDPT-------DGGTCYY---QCMARGMLTGPG 175
+G +CE+ P G++G+ G +C++ +C TGPG
Sbjct: 1156 RGSHCEQACPRGWFGEACAQRCHCPPGASCHHVSGECHCPPGFTGPG 1202
Score = 162 (62.1 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 47/136 (34%), Positives = 59/136 (43%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHC- 93
G C P + SCQ C+ G G DC C C+ H C G+C C G C
Sbjct: 845 GRCSCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLC-LCEAGYEGPQCE 903
Query: 94 QYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GY 151
Q+CR G +G GC +KC C HG CD ++G C C +G CE P G+
Sbjct: 904 QWCRQGYFG-----PGCEQKCRCE-HG----ATCDHVSGACTCPAGWRGSFCEHACPAGF 953
Query: 152 YGDPTDGGTCYYQCMA 167
+G G C C A
Sbjct: 954 FGLDC-GSAC--NCSA 966
Score = 161 (61.7 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 54/183 (29%), Positives = 76/183 (41%)
Query: 34 CYN--KC--IYGYCKGPPDY---SC--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C+N C + G C P + +C C G G +C +CLC N +C +G C C
Sbjct: 1007 CFNGASCDPVLGQCHCAPGWMGPTCLQACPAGLYGKNCQHSCLCRNGGSCDPILGQCT-C 1065
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
+ TG C+ C G +G GCR C C +G G CD +TG C C G
Sbjct: 1066 PEGWTGLACENECLPGHHG-----AGCRLNCSC-LNG----GTCDRLTGHCRCPAGWTGD 1115
Query: 143 NCER-CLPGYYGDPTD-------GGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDT 194
C+ C+ G +G + G TC++ + L PG +G A W G+
Sbjct: 1116 KCQSPCVSGMFGVHCEEHCACRKGATCHH--VTGACLCPPGWRGSHCEQACPRGWFGEAC 1173
Query: 195 PSR 197
R
Sbjct: 1174 AQR 1176
Score = 155 (59.6 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 43/128 (33%), Positives = 57/128 (44%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
+ LC C GY +GP C+ C G+ G C C C + +TC H G C W
Sbjct: 888 SGLCL--CEAGY-EGP---QCEQWCRQGYFGPGCEQKCRCEHGATCDHVSGACTCPAGWR 941
Query: 89 TGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNC-E 145
G C++ C AG +G DC S N G CD++TG CIC G +C +
Sbjct: 942 -GSFCEHACPAGFFG----------LDCGSACNCSAGAPCDAVTGSCICPAGRWGPHCAQ 990
Query: 146 RCLPGYYG 153
C P +G
Sbjct: 991 TCPPLTFG 998
Score = 151 (58.2 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 40/113 (35%), Positives = 54/113 (47%)
Query: 59 GVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDCN 116
G++CS C C N ++C +G C W G C Q C AG YG + C+ C C
Sbjct: 998 GLNCSQICTCFNGASCDPVLGQCHCAPGWM-GPTCLQACPAGLYG-----KNCQHSCLCR 1051
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG-------DPTDGGTC 161
+ G+ CD I G+C C + G CE CLPG++G +GGTC
Sbjct: 1052 NGGS-----CDPILGQCTCPEGWTGLACENECLPGHHGAGCRLNCSCLNGGTC 1099
Score = 150 (57.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 43/142 (30%), Positives = 61/142 (42%)
Query: 34 CYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
C++ + G C PP + C+ C GW G C+ C C ++C H G C C
Sbjct: 1142 CHH--VTGACLCPPGWRGSHCEQACPRGWFGEACAQRCHCPPGASCHHVSGEC-HCPPGF 1198
Query: 89 TGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-R 146
TG C Q C+ G++G + C C G + C +G C+C G +C+ R
Sbjct: 1199 TGPGCEQACQPGTFG-----KDCEH-PCQCPGET--WACHPASGACVCAAGYHGTDCQQR 1250
Query: 147 CLPGYYGDPTD-------GGTC 161
C G YG + GGTC
Sbjct: 1251 CPSGRYGPGCEQICKCLNGGTC 1272
Score = 146 (56.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 43/140 (30%), Positives = 56/140 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVH 76
+ SL + C G P C C GWTG+ +CS C+C N TC
Sbjct: 521 DCSLTCDDCRNGGTCFPGLDGCDCPEGWTGIICNETCPPDTFGKNCSSPCICQNGGTCDP 580
Query: 77 GIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECI 134
G C C +G HC+ C G YG + CRK C C + G C + G C+
Sbjct: 581 VSGAC-RCPPGVSGAHCEDGCPKGFYG-----KHCRKKCHCANRGR-----CHRLYGACL 629
Query: 135 CQDNTQGKNCE-RCLPGYYG 153
C G+ C C P +G
Sbjct: 630 CDPGLYGRFCHLACPPWAFG 649
Score = 145 (56.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 42/122 (34%), Positives = 56/122 (45%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
C +C GY +G D +C +G GV+CS +C C + C G C C TG+ C
Sbjct: 716 CRTQCPPGY-QGE-DCGQECPVGTFGVNCSGSCSCVG-APCHRVTGEC-LCPPGKTGEDC 771
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GY 151
C G +G QE C C+ HG S CD TG C+C G C+ P G+
Sbjct: 772 GADCPEGRWGLGC-QEICPACE---HGAS----CDPETGTCLCLPGFVGSRCQDACPAGW 823
Query: 152 YG 153
+G
Sbjct: 824 FG 825
Score = 145 (56.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/145 (31%), Positives = 58/145 (40%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGIGICDE------ 83
KC+ G P +C C G+ G DCS+ C C + TC G CD
Sbjct: 1265 KCLNGGTCDPATGACYCPAGFLGADCSLACPQGRFGPSCAHVCTCGQGAA-CDPVSGTCI 1323
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQG 141
C TG HC+ C +G +GC KC C + G G+C + G C C G
Sbjct: 1324 CPPGKTGGHCERGCPQDRFG-----KGCEHKCACRN-G----GLCHATNGSCSCPLGWMG 1373
Query: 142 KNCERCLP-GYYGDPTDGGTCYYQC 165
+CE P G YG C +C
Sbjct: 1374 PHCEHACPAGRYG-----AACLLEC 1393
Score = 144 (55.7 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 49/154 (31%), Positives = 66/154 (42%)
Query: 33 LCYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDE 83
+C N C + G C+ PP S C+ C G+ G C C C N C G C
Sbjct: 571 ICQNGGTCDPVSGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHCANRGRCHRLYGAC-L 629
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C G C C ++G +++ C C+ SH S C+S G C C+ QG+
Sbjct: 630 CDPGLYGRFCHLACPPWAFGPGCSED-CL-CE-QSHTRS----CNSKDGSCSCKAGFQGE 682
Query: 143 NCE-RCLPGYYGDPTDGGTCYYQCMAR-GMLTGP 174
CE C PG +G P G C +C R G+ P
Sbjct: 683 RCEAECEPGSFG-P--G--CRNRCTCRPGVACDP 711
Score = 136 (52.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 35/99 (35%), Positives = 47/99 (47%)
Query: 59 GVDCSVNCL-CNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDC 115
G DCS+ C C N TC G+ CD C + TG C + C ++G + C C C
Sbjct: 519 GHDCSLTCDDCRNGGTCFPGLDGCD-CPEGWTGIICNETCPPDTFG-----KNCSSPCIC 572
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ G G CD ++G C C G +CE C G+YG
Sbjct: 573 QN-G----GTCDPVSGACRCPPGVSGAHCEDGCPKGFYG 606
Score = 127 (49.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 38/124 (30%), Positives = 52/124 (41%)
Query: 39 IYGYCKGPP-----DYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDH 92
+ G C PP D C G G+ C C C + ++C G C C G
Sbjct: 756 VTGECLCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGASCDPETGTC-LCLPGFVGSR 814
Query: 93 CQ-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLP 149
CQ C AG +G GC+ +C C + G+ C TG C C G +C+R C
Sbjct: 815 CQDACPAGWFGT-----GCQMRCACANDGH-----CHPATGRCSCAPGWTGLSCQRACDS 864
Query: 150 GYYG 153
G++G
Sbjct: 865 GHWG 868
Score = 126 (49.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 42/134 (31%), Positives = 50/134 (37%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
C GY G D +C G G C C C N TC G C C G C C
Sbjct: 1238 CAAGY-HGT-DCQQRCPSGRYGPGCEQICKCLNGGTCDPATGAC-YCPAGFLGADCSLAC 1294
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
G +G + C C G CD ++G CIC G +CER G P
Sbjct: 1295 PQGRFGPSCAHV----CTCGQ-G----AACDPVSGTCICPPGKTGGHCER------GCPQ 1339
Query: 157 D--GGTCYYQCMAR 168
D G C ++C R
Sbjct: 1340 DRFGKGCEHKCACR 1353
Score = 125 (49.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 35/117 (29%), Positives = 48/117 (41%)
Query: 48 DYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
D SC C+ G+ G C C C N TC G+ CD +G+ C G
Sbjct: 670 DGSCSCKAGFQGERCEAECEPGSFGPGCRNRCTCRPGVA-CDP----VSGECRTQCPPGY 724
Query: 101 YGNATTQE---GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
G QE G +C+ + V C +TGEC+C G++C C G +G
Sbjct: 725 QGEDCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGADCPEGRWG 781
Score = 118 (46.6 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 39/121 (32%), Positives = 52/121 (42%)
Query: 41 GYCK-GPPDY--SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C GP Y +C+ C G+ G C C C + C G C C G C+
Sbjct: 1406 GACLCGPGFYGQACEDTCPAGFHGSGCQRVCECQQGAPCDPVSGRC-LCPAGFRGQFCER 1464
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCER-CLPGYY 152
C+ G +G +GC + CNS GV CD I+G C+C G C+ C G +
Sbjct: 1465 GCKPGFFG-----DGCLQ-QCNSP----TGVPCDPISGLCLCPPGRAGTTCDLDCRRGRF 1514
Query: 153 G 153
G
Sbjct: 1515 G 1515
Score = 75 (31.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEIC 332
CP +C ++ +C CPP TGP C E+ C
Sbjct: 1179 CPPGASCHHVSGECHCPPGFTGPGC-EQAC 1207
Score = 73 (30.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 21/56 (37%), Positives = 26/56 (46%)
Query: 302 PDKCP-ENRTC--INNQCVCPPRRTGPDCQEEICPNE-----CHEF---LNHGTCD 346
P +CP E C + CVC G DCQ+ CP+ C + LN GTCD
Sbjct: 1219 PCQCPGETWACHPASGACVCAAGYHGTDCQQR-CPSGRYGPGCEQICKCLNGGTCD 1273
Score = 73 (30.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 22/56 (39%), Positives = 24/56 (42%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE----CH---EFLNHGTCDLLLTG 351
C +C I QC CP TG C+ E P C LN GTCD L TG
Sbjct: 1050 CRNGGSCDPILGQCTCPEGWTGLACENECLPGHHGAGCRLNCSCLNGGTCDRL-TG 1104
Score = 72 (30.4 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 300 SCPDKCP-ENRTC--INNQCVCPPRRTGPDCQEEICPNE-----CHEFL---NHG-TCD 346
+C C C + +C+CPP +TG DC + CP C E HG +CD
Sbjct: 741 NCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGAD-CPEGRWGLGCQEICPACEHGASCD 798
Score = 71 (30.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE 335
C + C ++ C+CPP +TG C E CP +
Sbjct: 1309 CGQGAACDPVSGTCICPPGKTGGHC-ERGCPQD 1340
Score = 68 (29.0 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 18/63 (28%), Positives = 24/63 (38%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEF---LNHGTCDLLLTGVHI 354
C C + C+CP R GP C + CP C + N +CD +L H
Sbjct: 964 CSAGAPCDAVTGSCICPAGRWGPHCAQT-CPPLTFGLNCSQICTCFNGASCDPVLGQCHC 1022
Query: 355 THG 357
G
Sbjct: 1023 APG 1025
Score = 68 (29.0 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 21/73 (28%), Positives = 30/73 (41%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTGVHITHGRTL- 360
CP +T + + CP R G C+ + C N CH +C L G H H
Sbjct: 1324 CPPGKTGGHCERGCPQDRFGKGCEHKCACRNGGLCHATNGSCSCPLGWMGPHCEHACPAG 1383
Query: 361 HYQVD-LIRCTCR 372
Y L+ C+C+
Sbjct: 1384 RYGAACLLECSCQ 1396
Score = 65 (27.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C + TC + C+CPP G C E+ CP
Sbjct: 1136 CRKGATCHHVTGACLCPPGWRGSHC-EQACP 1165
Score = 61 (26.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 17/54 (31%), Positives = 21/54 (38%)
Query: 282 HYKQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
H ++G P + F + C C C N C CP GP C E CP
Sbjct: 1332 HCERGCPQDRFGKGCE-HKCA--CRNGGLCHATNGSCSCPLGWMGPHC-EHACP 1381
Score = 61 (26.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 19/55 (34%), Positives = 24/55 (43%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP-----NEC-HEFL--NHGTCDLLL 349
C +C + QC C P GP C + CP C H L N G+CD +L
Sbjct: 1007 CFNGASCDPVLGQCHCAPGWMGPTCLQA-CPAGLYGKNCQHSCLCRNGGSCDPIL 1060
Score = 58 (25.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/71 (29%), Positives = 28/71 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQV 364
C T ++ Q C GPDC I P C HG CD + +G+ + Y+
Sbjct: 849 CAPGWTGLSCQRACDSGHWGPDC---IHPCNCSA--GHGNCDAV-SGLCLCEAG---YEG 899
Query: 365 DLIRCTCRQVY 375
CRQ Y
Sbjct: 900 PQCEQWCRQGY 910
Score = 57 (25.1 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 301 CPDKC--PENRTC--INNQCVCPPRRTGPDC 327
C +C P C I+ C+CPP R G C
Sbjct: 1475 CLQQCNSPTGVPCDPISGLCLCPPGRAGTTC 1505
Score = 57 (25.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 17/60 (28%), Positives = 23/60 (38%)
Query: 305 CPENRTC--INNQC--VCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTL 360
C C ++ +C CPP G DC +E CP G+C + H G L
Sbjct: 703 CRPGVACDPVSGECRTQCPPGYQGEDCGQE-CPVGTFGVNCSGSCSCVGAPCHRVTGECL 761
Score = 56 (24.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEE 330
C CPE R + Q +CP G C E
Sbjct: 771 CGADCPEGRWGLGCQEICPACEHGASCDPE 800
Score = 55 (24.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C TC ++ C CP G C E CP
Sbjct: 920 RCEHGATCDHVSGACTCPAGWRGSFC-EHACP 950
Score = 52 (23.4 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQE 329
C C I+ QC C TGP C+E
Sbjct: 1524 CGGGADCDPISGQCHCVDSYTGPTCRE 1550
Score = 51 (23.0 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 301 CPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
CP C +C C+C P G CQ+ CP
Sbjct: 788 CP-ACEHGASCDPETGTCLCLPGFVGSRCQDA-CP 820
Score = 50 (22.7 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 12/32 (37%), Positives = 12/32 (37%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
KC TC C CP G DC CP
Sbjct: 1265 KCLNGGTCDPATGACYCPAGFLGADCSLA-CP 1295
Score = 50 (22.7 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 17/57 (29%), Positives = 19/57 (33%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN----ECHEFLNHGTCDLLLTGVHIT 355
C TC + C CP TG CQ C E H C T H+T
Sbjct: 1093 CLNGGTCDRLTGHCRCPAGWTGDKCQSPCVSGMFGVHCEE---HCACRKGATCHHVT 1146
Score = 49 (22.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 318 CPPRRTGPDCQEEICPNECH 337
CPP GP C E+ + H
Sbjct: 643 CPPWAFGPGCSEDCLCEQSH 662
Score = 46 (21.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 13/48 (27%), Positives = 19/48 (39%)
Query: 308 NRTCINNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHG-TCD 346
N ++ C+C GP C++ C +C HG TCD
Sbjct: 883 NCDAVSGLCLCEAGYEGPQCEQWCRQGYFGPGCEQKCR--CEHGATCD 928
Score = 45 (20.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C + C ++ +C+CP G C+ P
Sbjct: 1437 ECQQGAPCDPVSGRCLCPAGFRGQFCERGCKP 1468
Score = 44 (20.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEIC 332
CP + CP R GP C +C
Sbjct: 1281 CPAGFLGADCSLACPQGRFGPSCAH-VC 1307
>MGI|MGI:109321 [details] [associations]
symbol:Lama4 "laminin, alpha 4" species:10090 "Mus musculus"
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005606 "laminin-1
complex" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IDA] [GO:0070062
"extracellular vesicular exosome" evidence=ISO] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 MGI:MGI:109321
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
eggNOG:NOG247347 GO:GO:0005606 CTD:3910 HOVERGEN:HBG052299
KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB ChiTaRS:LAMA4 EMBL:U58950
EMBL:Y09827 EMBL:U59865 EMBL:BC115942 EMBL:U88352 EMBL:U69176
IPI:IPI00223446 RefSeq:NP_034811.2 UniGene:Mm.258065
ProteinModelPortal:P97927 SMR:P97927 STRING:P97927
PhosphoSite:P97927 PaxDb:P97927 PRIDE:P97927
Ensembl:ENSMUST00000019992 GeneID:16775 KEGG:mmu:16775
UCSC:uc007evq.2 HOGENOM:HOG000113278 InParanoid:Q14BF2
NextBio:290616 Bgee:P97927 CleanEx:MM_LAMA4 Genevestigator:P97927
GermOnline:ENSMUSG00000019846 Uniprot:P97927
Length = 1816
Score = 208 (78.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 64/184 (34%), Positives = 80/184 (43%)
Query: 37 KCIYGYC----KGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGI--CDECHDWTT 89
KC+ GY +G P + CQ C C + L N +C G C C +
Sbjct: 112 KCLDGYIGDSIRGTPRF-CQPCP-------CPLPHLANFAESCYRKNGAVRCI-CKENYV 162
Query: 90 GDHCQYCRAGSYGNATT-QEGCRKCDC--NSHGNSVLGVCDSITGECI-CQDNTQGKNCE 145
G +C+ C G YGN C+KCDC NS N + CD ITG+C C NT G CE
Sbjct: 163 GPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEITGQCRNCLRNTTGFKCE 222
Query: 146 RCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSR--ECLWII 203
RC PGYYGD C C G GP G L E G + P+ +C+W +
Sbjct: 223 RCAPGYYGDARTAKNCAV-CNCGG---GPCDSVTGECLEE-----GFEVPTGCDKCVWDL 273
Query: 204 GQSL 207
L
Sbjct: 274 TDDL 277
Score = 207 (77.9 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 49/133 (36%), Positives = 67/133 (50%)
Query: 47 PDYSCQCELGWTGV---DCSVNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYG 102
P + +C+ G+ +C+ C CN +S C+ G G C C TTG+HC+ C G G
Sbjct: 61 PPAAERCDAGFFRTLSGECAP-CDCNGNSHECLDGSGFCLHCQRNTTGEHCEKCLDGYIG 119
Query: 103 NAT--TQEGCRKCDCN-SHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT- 156
++ T C+ C C H + C G CIC++N G NCERC PGYYG+P
Sbjct: 120 DSIRGTPRFCQPCPCPLPHLANFAESCYRKNGAVRCICKENYVGPNCERCAPGYYGNPLL 179
Query: 157 DGGTCYYQCMARG 169
G TC +C G
Sbjct: 180 IGSTCK-KCDCSG 191
Score = 41 (19.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 238 YDGLPDFV-TSVGGT 251
+DGLP FV TS+ T
Sbjct: 1303 HDGLPHFVVTSISDT 1317
Score = 39 (18.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 231 NENAVYIYD-GLPD 243
N+N VY+Y+ G+ D
Sbjct: 896 NDNLVYVYNLGMKD 909
>WB|WBGene00000415 [details] [associations]
symbol:ced-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0043652
"engulfment of apoptotic cell" evidence=IMP] [GO:0043654
"recognition of apoptotic cell" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005044 "scavenger receptor activity"
evidence=ISS;IPI] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0031260 "pseudopodium membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0001891 "phagocytic
cup" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 184 (69.8 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 87/302 (28%), Positives = 108/302 (35%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTTGDHCQY 95
C G D CQC+ GWTG C +C C C GIG CD TG+ C
Sbjct: 483 CDGA-DGKCQCDRGWTGHRCEHHCPADTFGANCEKRCKCPKGIG-CDPI----TGE-CT- 534
Query: 96 CRAGSYGNATTQEGCRKCD----CNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPG 150
C AG G A GC + C H V G CD TGEC CQ G +C C G
Sbjct: 535 CPAGLQG-ANCDIGCPEGSYGPGCKLHCKCVNGKCDKETGECTCQPGFFGSDCSTTCSKG 593
Query: 151 YYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSN 210
YG+ + +C + TG LG+ + +T C + S
Sbjct: 594 KYGESCEL-SCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDPNTFGFLCQETVTPS-PCA 651
Query: 211 STAPADIILLRLQPDIN-VPCNENA-VYIY-DGLPDFVTSVGGTHQSTTLGVFCTEDMHR 267
ST P + + L P + + C N Y DG + G T G E +
Sbjct: 652 STDPKNGVCLSCPPGSSGIHCEHNCPAGSYGDGCQQVCSCADGHGCDPTTGECICEPGYH 711
Query: 268 GYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGP 325
G E GK G+ CP KC TC IN C+CP G
Sbjct: 712 GKTCSEK--------CPDGK--YGYGCA---LDCP-KCASGSTCDHINGLCICPAGLEGA 757
Query: 326 DC 327
C
Sbjct: 758 LC 759
Score = 180 (68.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 48/138 (34%), Positives = 62/138 (44%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHST--CVHGIGICDECHDWTTGDHCQ 94
+C GY KGP +C+ G DCS C C +T C G C C GD+C+
Sbjct: 356 QCESGY-KGPKCDERKCDAEQYGADCSKTCTCVRENTLMCAPNTGFC-RCKPGFYGDNCE 413
Query: 95 Y-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYY 152
C SYG ++ CD N H + C+ TG C+C+ GKNC E C +Y
Sbjct: 414 LACSKDSYGPNCEKQAM--CDWN-HASE----CNPETGSCVCKPGRTGKNCSEPCPLDFY 466
Query: 153 GDPTDGGTCYYQCMARGM 170
G P C QC RG+
Sbjct: 467 G-PNCAHQC--QCNQRGV 481
Score = 166 (63.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 50/141 (35%), Positives = 66/141 (46%)
Query: 41 GYCKGPPDY---SC--QCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC- 93
G C P Y +C +C G G C+++C C + STC H G+C C G C
Sbjct: 702 GECICEPGYHGKTCSEKCPDGKYGYGCALDCPKCASGSTCDHINGLCI-CPAGLEGALCT 760
Query: 94 QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGY 151
+ C AG +GN GCR+ C C S C++ TGEC C QG C++ C GY
Sbjct: 761 RPCSAGFWGN-----GCRQVCRCTSEYKQ----CNAQTGECSCPAGFQGDRCDKPCEDGY 811
Query: 152 YGDPTDGGTCYYQCMARGMLT 172
YG P C +C +G T
Sbjct: 812 YG-PD----CIKKCKCQGTAT 827
Score = 158 (60.7 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 51/151 (33%), Positives = 68/151 (45%)
Query: 10 LTTAKDDALSRCTVLLLYIFN-ASLCYNKCIYGYCK-GPPDYSCQ--CELGWTGVDCSVN 65
L +KD C + +N AS C + CK G +C C L + G +C+
Sbjct: 414 LACSKDSYGPNCEKQAMCDWNHASECNPETGSCVCKPGRTGKNCSEPCPLDFYGPNCAHQ 473
Query: 66 CLCNNHST-CVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVL 123
C CN C G C +C TG C++ C A ++G A ++ C KC G +
Sbjct: 474 CQCNQRGVGCDGADGKC-QCDRGWTGHRCEHHCPADTFG-ANCEKRC-KCP---KG---I 524
Query: 124 GVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
G CD ITGEC C QG NC+ C G YG
Sbjct: 525 G-CDPITGECTCPAGLQGANCDIGCPEGSYG 554
Score = 156 (60.0 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 46/142 (32%), Positives = 64/142 (45%)
Query: 30 NASLCYN---KCIYGYCK-GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDE 83
N + C N KCI CK G C+ C +G+ G C+ C C N+ C G C +
Sbjct: 253 NGATCDNTNGKCI---CKSGYHGALCENECSVGFFGSGCTQKCDCLNNQNCDSSSGEC-K 308
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C WT G HC C G +G ++ C C +S CD+ TG+C C+ +G
Sbjct: 309 CIGWT-GKHCDIGCSRGRFG-LQCKQNCT-CPGLEFSDSNAS-CDAKTGQCQCESGYKGP 364
Query: 143 NCE--RCLPGYYG-DPTDGGTC 161
C+ +C YG D + TC
Sbjct: 365 KCDERKCDAEQYGADCSKTCTC 386
Score = 152 (58.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 39/104 (37%), Positives = 52/104 (50%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGC 110
+CE G G +C C C N +TC + G C C G C+ C G +G+ TQ
Sbjct: 235 KCEEGKFGAECKFECNCQNGATCDNTNGKCI-CKSGYHGALCENECSVGFFGSGCTQ--- 290
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
KCDC ++ N CDS +GEC C T GK+C+ C G +G
Sbjct: 291 -KCDCLNNQN-----CDSSSGECKCIGWT-GKHCDIGCSRGRFG 327
Score = 140 (54.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 43/151 (28%), Positives = 62/151 (41%)
Query: 37 KCIY-GYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTG 90
KCI G C+ P Y C C +G G+ CS +C C N + C +G C C G
Sbjct: 129 KCIEPGKCECDPGYGGKYCASSCSVGTWGLGCSKSCDCENGANCDPELGTCI-CTSGFQG 187
Query: 91 DHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERC 147
+ C+ C +G C K C C + G C+ G+C+C D G+ C +C
Sbjct: 188 ERCEKPCPDNKWG-----PNCVKSCPCQNGGK-----CNK-EGKCVCSDGWGGEFCLNKC 236
Query: 148 LPGYYGDPTDGGTCYYQCMARGMLTGPGPQG 178
G +G C ++C + T G
Sbjct: 237 EEGKFG-----AECKFECNCQNGATCDNTNG 262
Score = 116 (45.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 49/177 (27%), Positives = 71/177 (40%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY- 95
+C GY G + C +G G+ CS +C C N + C +G C C G+ C+
Sbjct: 137 ECDPGY--GGKYCASSCSVGTWGLGCSKSCDCENGANCDPELGTCI-CTSGFQGERCEKP 193
Query: 96 CRAGSYG-NATTQEGCRKCD-CNSHGNSVLGVCDSITGE-CI--CQDNTQGKNCE---RC 147
C +G N C+ CN G V D GE C+ C++ G C+ C
Sbjct: 194 CPDNKWGPNCVKSCPCQNGGKCNKEGKCVCS--DGWGGEFCLNKCEEGKFGAECKFECNC 251
Query: 148 LPGYYGDPTDGGTCYYQCMARGMLT-GPGPQGL-GSGLAER-NAWEGK--DTPSREC 199
G D T+G C + G L G GSG ++ + + D+ S EC
Sbjct: 252 QNGATCDNTNG-KCICKSGYHGALCENECSVGFFGSGCTQKCDCLNNQNCDSSSGEC 307
Score = 67 (28.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 22/85 (25%), Positives = 35/85 (41%)
Query: 272 LEAKSGVMTIHYKQGKPSEGF-NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEE 330
L G IH + P+ + + Q+ SC D + T +C+C P G C E+
Sbjct: 661 LSCPPGSSGIHCEHNCPAGSYGDGCQQVCSCADGHGCDPT--TGECICEPGYHGKTCSEK 718
Query: 331 ICPN---------ECHEFLNHGTCD 346
CP+ +C + + TCD
Sbjct: 719 -CPDGKYGYGCALDCPKCASGSTCD 742
Score = 62 (26.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 316 CVCPPRRTGPDCQEEICP 333
CVC P RTG +C E CP
Sbjct: 446 CVCKPGRTGKNCSEP-CP 462
Score = 60 (26.2 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 300 SCPDKCP-ENRTCINN--QCVCPPRRTGPDCQEEICPNE----CHEFLNHGTC 345
SC CP + +C +C+CP G C ++ PN C E + C
Sbjct: 598 SCELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDPNTFGFLCQETVTPSPC 650
Score = 52 (23.4 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEF-LNHGTCDLL---LTGVHITH 356
CP ++ C P G CQE + P+ C +G C +G+H H
Sbjct: 619 CPLGTKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEH 674
Score = 52 (23.4 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 300 SCP--DKCPENRTCI--NNQCVCPPRRTGPDCQEEICPNE 335
+CP + N +C QC C GP C E C E
Sbjct: 335 TCPGLEFSDSNASCDAKTGQCQCESGYKGPKCDERKCDAE 374
Score = 50 (22.7 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 18/52 (34%), Positives = 22/52 (42%)
Query: 287 KPSE-GFNATYQIFSCPDKCPENRT--C--INNQCVCPPRRTGPDCQEEICP 333
KP E G+ I C KC T C ++ C C P TG C +CP
Sbjct: 805 KPCEDGYYGPDCIKKC--KCQGTATSSCNRVSGACHCHPGFTGEFCHA-LCP 853
Score = 47 (21.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPN-ECHEFLNHGTC 345
CP N CP GP C+ C N +C + TC
Sbjct: 535 CPAGLQGANCDIGCPEGSYGPGCKLHCKCVNGKCDKETGECTC 577
>UNIPROTKB|Q9XWD6 [details] [associations]
symbol:ced-1 "Cell death abnormality protein 1"
species:6239 "Caenorhabditis elegans" [GO:0001845 "phagolysosome
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IDA;IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0034620 "cellular response to unfolded protein"
evidence=IDA] [GO:0045184 "establishment of protein localization"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031532 "actin cytoskeleton reorganization" evidence=IDA]
[GO:0012501 "programmed cell death" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 184 (69.8 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 87/302 (28%), Positives = 108/302 (35%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHDWTTGDHCQY 95
C G D CQC+ GWTG C +C C C GIG CD TG+ C
Sbjct: 483 CDGA-DGKCQCDRGWTGHRCEHHCPADTFGANCEKRCKCPKGIG-CDPI----TGE-CT- 534
Query: 96 CRAGSYGNATTQEGCRKCD----CNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPG 150
C AG G A GC + C H V G CD TGEC CQ G +C C G
Sbjct: 535 CPAGLQG-ANCDIGCPEGSYGPGCKLHCKCVNGKCDKETGECTCQPGFFGSDCSTTCSKG 593
Query: 151 YYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSN 210
YG+ + +C + TG LG+ + +T C + S
Sbjct: 594 KYGESCEL-SCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDPNTFGFLCQETVTPS-PCA 651
Query: 211 STAPADIILLRLQPDIN-VPCNENA-VYIY-DGLPDFVTSVGGTHQSTTLGVFCTEDMHR 267
ST P + + L P + + C N Y DG + G T G E +
Sbjct: 652 STDPKNGVCLSCPPGSSGIHCEHNCPAGSYGDGCQQVCSCADGHGCDPTTGECICEPGYH 711
Query: 268 GYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGP 325
G E GK G+ CP KC TC IN C+CP G
Sbjct: 712 GKTCSEK--------CPDGK--YGYGCA---LDCP-KCASGSTCDHINGLCICPAGLEGA 757
Query: 326 DC 327
C
Sbjct: 758 LC 759
Score = 180 (68.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 48/138 (34%), Positives = 62/138 (44%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHST--CVHGIGICDECHDWTTGDHCQ 94
+C GY KGP +C+ G DCS C C +T C G C C GD+C+
Sbjct: 356 QCESGY-KGPKCDERKCDAEQYGADCSKTCTCVRENTLMCAPNTGFC-RCKPGFYGDNCE 413
Query: 95 Y-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYY 152
C SYG ++ CD N H + C+ TG C+C+ GKNC E C +Y
Sbjct: 414 LACSKDSYGPNCEKQAM--CDWN-HASE----CNPETGSCVCKPGRTGKNCSEPCPLDFY 466
Query: 153 GDPTDGGTCYYQCMARGM 170
G P C QC RG+
Sbjct: 467 G-PNCAHQC--QCNQRGV 481
Score = 166 (63.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 50/141 (35%), Positives = 66/141 (46%)
Query: 41 GYCKGPPDY---SC--QCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC- 93
G C P Y +C +C G G C+++C C + STC H G+C C G C
Sbjct: 702 GECICEPGYHGKTCSEKCPDGKYGYGCALDCPKCASGSTCDHINGLCI-CPAGLEGALCT 760
Query: 94 QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGY 151
+ C AG +GN GCR+ C C S C++ TGEC C QG C++ C GY
Sbjct: 761 RPCSAGFWGN-----GCRQVCRCTSEYKQ----CNAQTGECSCPAGFQGDRCDKPCEDGY 811
Query: 152 YGDPTDGGTCYYQCMARGMLT 172
YG P C +C +G T
Sbjct: 812 YG-PD----CIKKCKCQGTAT 827
Score = 158 (60.7 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 51/151 (33%), Positives = 68/151 (45%)
Query: 10 LTTAKDDALSRCTVLLLYIFN-ASLCYNKCIYGYCK-GPPDYSCQ--CELGWTGVDCSVN 65
L +KD C + +N AS C + CK G +C C L + G +C+
Sbjct: 414 LACSKDSYGPNCEKQAMCDWNHASECNPETGSCVCKPGRTGKNCSEPCPLDFYGPNCAHQ 473
Query: 66 CLCNNHST-CVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVL 123
C CN C G C +C TG C++ C A ++G A ++ C KC G +
Sbjct: 474 CQCNQRGVGCDGADGKC-QCDRGWTGHRCEHHCPADTFG-ANCEKRC-KCP---KG---I 524
Query: 124 GVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
G CD ITGEC C QG NC+ C G YG
Sbjct: 525 G-CDPITGECTCPAGLQGANCDIGCPEGSYG 554
Score = 156 (60.0 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 46/142 (32%), Positives = 64/142 (45%)
Query: 30 NASLCYN---KCIYGYCK-GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDE 83
N + C N KCI CK G C+ C +G+ G C+ C C N+ C G C +
Sbjct: 253 NGATCDNTNGKCI---CKSGYHGALCENECSVGFFGSGCTQKCDCLNNQNCDSSSGEC-K 308
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C WT G HC C G +G ++ C C +S CD+ TG+C C+ +G
Sbjct: 309 CIGWT-GKHCDIGCSRGRFG-LQCKQNCT-CPGLEFSDSNAS-CDAKTGQCQCESGYKGP 364
Query: 143 NCE--RCLPGYYG-DPTDGGTC 161
C+ +C YG D + TC
Sbjct: 365 KCDERKCDAEQYGADCSKTCTC 386
Score = 152 (58.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 39/104 (37%), Positives = 52/104 (50%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGC 110
+CE G G +C C C N +TC + G C C G C+ C G +G+ TQ
Sbjct: 235 KCEEGKFGAECKFECNCQNGATCDNTNGKCI-CKSGYHGALCENECSVGFFGSGCTQ--- 290
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
KCDC ++ N CDS +GEC C T GK+C+ C G +G
Sbjct: 291 -KCDCLNNQN-----CDSSSGECKCIGWT-GKHCDIGCSRGRFG 327
Score = 140 (54.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 43/151 (28%), Positives = 62/151 (41%)
Query: 37 KCIY-GYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTG 90
KCI G C+ P Y C C +G G+ CS +C C N + C +G C C G
Sbjct: 129 KCIEPGKCECDPGYGGKYCASSCSVGTWGLGCSKSCDCENGANCDPELGTCI-CTSGFQG 187
Query: 91 DHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERC 147
+ C+ C +G C K C C + G C+ G+C+C D G+ C +C
Sbjct: 188 ERCEKPCPDNKWG-----PNCVKSCPCQNGGK-----CNK-EGKCVCSDGWGGEFCLNKC 236
Query: 148 LPGYYGDPTDGGTCYYQCMARGMLTGPGPQG 178
G +G C ++C + T G
Sbjct: 237 EEGKFG-----AECKFECNCQNGATCDNTNG 262
Score = 116 (45.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 49/177 (27%), Positives = 71/177 (40%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY- 95
+C GY G + C +G G+ CS +C C N + C +G C C G+ C+
Sbjct: 137 ECDPGY--GGKYCASSCSVGTWGLGCSKSCDCENGANCDPELGTCI-CTSGFQGERCEKP 193
Query: 96 CRAGSYG-NATTQEGCRKCD-CNSHGNSVLGVCDSITGE-CI--CQDNTQGKNCE---RC 147
C +G N C+ CN G V D GE C+ C++ G C+ C
Sbjct: 194 CPDNKWGPNCVKSCPCQNGGKCNKEGKCVCS--DGWGGEFCLNKCEEGKFGAECKFECNC 251
Query: 148 LPGYYGDPTDGGTCYYQCMARGMLT-GPGPQGL-GSGLAER-NAWEGK--DTPSREC 199
G D T+G C + G L G GSG ++ + + D+ S EC
Sbjct: 252 QNGATCDNTNG-KCICKSGYHGALCENECSVGFFGSGCTQKCDCLNNQNCDSSSGEC 307
Score = 67 (28.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 22/85 (25%), Positives = 35/85 (41%)
Query: 272 LEAKSGVMTIHYKQGKPSEGF-NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEE 330
L G IH + P+ + + Q+ SC D + T +C+C P G C E+
Sbjct: 661 LSCPPGSSGIHCEHNCPAGSYGDGCQQVCSCADGHGCDPT--TGECICEPGYHGKTCSEK 718
Query: 331 ICPN---------ECHEFLNHGTCD 346
CP+ +C + + TCD
Sbjct: 719 -CPDGKYGYGCALDCPKCASGSTCD 742
Score = 62 (26.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 316 CVCPPRRTGPDCQEEICP 333
CVC P RTG +C E CP
Sbjct: 446 CVCKPGRTGKNCSEP-CP 462
Score = 60 (26.2 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 300 SCPDKCP-ENRTCINN--QCVCPPRRTGPDCQEEICPNE----CHEFLNHGTC 345
SC CP + +C +C+CP G C ++ PN C E + C
Sbjct: 598 SCELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDPNTFGFLCQETVTPSPC 650
Score = 52 (23.4 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEF-LNHGTCDLL---LTGVHITH 356
CP ++ C P G CQE + P+ C +G C +G+H H
Sbjct: 619 CPLGTKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEH 674
Score = 52 (23.4 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 300 SCP--DKCPENRTCI--NNQCVCPPRRTGPDCQEEICPNE 335
+CP + N +C QC C GP C E C E
Sbjct: 335 TCPGLEFSDSNASCDAKTGQCQCESGYKGPKCDERKCDAE 374
Score = 50 (22.7 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 18/52 (34%), Positives = 22/52 (42%)
Query: 287 KPSE-GFNATYQIFSCPDKCPENRT--C--INNQCVCPPRRTGPDCQEEICP 333
KP E G+ I C KC T C ++ C C P TG C +CP
Sbjct: 805 KPCEDGYYGPDCIKKC--KCQGTATSSCNRVSGACHCHPGFTGEFCHA-LCP 853
Score = 47 (21.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPN-ECHEFLNHGTC 345
CP N CP GP C+ C N +C + TC
Sbjct: 535 CPAGLQGANCDIGCPEGSYGPGCKLHCKCVNGKCDKETGECTC 577
>UNIPROTKB|P55268 [details] [associations]
symbol:LAMB2 "Laminin subunit beta-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0005605 "basal lamina" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11 complex"
evidence=TAS] Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
GO:GO:0007411 GO:GO:0005198 GO:GO:0007528 GO:GO:0007601
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0060041
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0014044
GO:GO:0014002 Orphanet:98915 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005608 GO:GO:0043260
eggNOG:NOG241384 HOGENOM:HOG000007552 InterPro:IPR013015
PROSITE:PS51116 HOVERGEN:HBG052301 EMBL:Z68155 EMBL:Z68156
EMBL:X79683 EMBL:S77512 IPI:IPI00296922 PIR:A55677 PIR:S53869
RefSeq:NP_002283.3 UniGene:Hs.439726 ProteinModelPortal:P55268
SMR:P55268 DIP:DIP-42106N IntAct:P55268 MINT:MINT-1197111
STRING:P55268 PhosphoSite:P55268 DMDM:156630892 PaxDb:P55268
PRIDE:P55268 DNASU:3913 Ensembl:ENST00000305544
Ensembl:ENST00000418109 GeneID:3913 KEGG:hsa:3913 UCSC:uc003cwe.3
CTD:3913 GeneCards:GC03M049133 HGNC:HGNC:6487 HPA:CAB000053
HPA:HPA001895 MIM:150325 MIM:609049 MIM:614199 neXtProt:NX_P55268
Orphanet:2670 PharmGKB:PA164741827 InParanoid:P55268 KO:K06243
OMA:QPYCIVS OrthoDB:EOG4KSPHW PhylomeDB:P55268 ChiTaRS:LAMB2
GenomeRNAi:3913 NextBio:15371 ArrayExpress:P55268 Bgee:P55268
CleanEx:HS_LAMB2 Genevestigator:P55268 GermOnline:ENSG00000172037
GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 Uniprot:P55268
Length = 1798
Score = 188 (71.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 51/159 (32%), Positives = 68/159 (42%)
Query: 31 ASLCYNKCIYGYCK-GPPDYSC-QCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDW 87
+SLC C+ G C +C+ G G C+CN H+ C G C C D
Sbjct: 840 SSLCEKTSGQCLCRTGAFGLRCDRCQRGQWGFPSCRPCVCNGHADECNTHTGACLGCRDH 899
Query: 88 TTGDHCQYCRAGSYGNATTQEG--CRKCDCNSHGNS---VLGVC--DSITGE--CICQDN 138
T G+HC+ C AG +G+ G CR C C S C D + + C C+
Sbjct: 900 TGGEHCERCIAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHQDEYSQQIVCHCRAG 959
Query: 139 TQGKNCERCLPGYYGDPT-DGGTCYYQCMARGMLTGPGP 176
G CE C PG++GDP+ GG C C G + P
Sbjct: 960 YTGLRCEACAPGHFGDPSRPGGRCQL-CECSGNIDPMDP 997
Score = 184 (69.8 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 42/119 (35%), Positives = 59/119 (49%)
Query: 68 CNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYGNATTQE-GCRKCDCNSHGNSVLG 124
C++H G+ G C C + G CQ CR G +G + + GCR+C CN+ G +V G
Sbjct: 423 CDSHDDPALGLVSGQC-RCKEHVVGTRCQQCRDGFFGLSISDRLGCRRCQCNARG-TVPG 480
Query: 125 V--CDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY-YQCMARGMLTGPGPQGLG 180
CD +G C C+ G+ C+RCLPG++G D C C G L +G G
Sbjct: 481 STPCDPNSGSCYCKRLVTGRGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEGTG 539
Score = 184 (69.8 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 49/146 (33%), Positives = 68/146 (46%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ--- 107
C+C G T C + S V G G+CD C T G HC+ CR Y + T
Sbjct: 347 CECH-GHTH-SCHFDMAVYLASGNVSG-GVCDGCQHNTAGRHCELCRPFFYRDPTKDLRD 403
Query: 108 -EGCRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYYG-DPTD 157
CR CDC+ G+ G CDS ++G+C C+++ G C++C G++G +D
Sbjct: 404 PAVCRSCDCDPMGSQDGGRCDSHDDPALGLVSGQCRCKEHVVGTRCQQCRDGFFGLSISD 463
Query: 158 GGTCYY-QCMARGMLTGPGPQGLGSG 182
C QC ARG + G P SG
Sbjct: 464 RLGCRRCQCNARGTVPGSTPCDPNSG 489
Score = 174 (66.3 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 50/147 (34%), Positives = 67/147 (45%)
Query: 43 CK-GPPDYSCQ-CELGWTG---VDCSVNCLCNNH----STCVHGIGICDECHDWTTGDHC 93
CK G C C G+ G C C C++ S C G C C G C
Sbjct: 804 CKPGVVGRRCDLCAPGYYGFGPTGCQA-CQCSHEGALSSLCEKTSGQC-LCRTGAFGLRC 861
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYY 152
C+ G +G + CR C CN H + C++ TG C+ C+D+T G++CERC+ G++
Sbjct: 862 DRCQRGQWGFPS----CRPCVCNGHADE----CNTHTGACLGCRDHTGGEHCERCIAGFH 913
Query: 153 GDPT--DGGTCYYQCMARGMLTGPGPQ 177
GDP GG C C GPG Q
Sbjct: 914 GDPRLPYGGQCR-PCPCP---EGPGSQ 936
Score = 172 (65.6 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 41/131 (31%), Positives = 58/131 (44%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
C G+ P +C+L +CS N + C G C C T G HC +C+
Sbjct: 968 CAPGHFGDPSRPGGRCQL----CECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHCAHCK 1023
Query: 98 AGSYGNATTQEGCRKCDCNSHGNSVLGV-------CDSITGECICQDNTQGKNCERCLPG 150
G +G A Q C +C CN G + CD +G+C C N QG +C+RC P
Sbjct: 1024 PGFHGQAARQS-CHRCTCNLLGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPN 1082
Query: 151 YYGDPTDGGTC 161
++ + T G C
Sbjct: 1083 FW-NLTSGHGC 1092
Score = 158 (60.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 39/112 (34%), Positives = 52/112 (46%)
Query: 52 QCELGWTGVDCSVN-----CLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGS 100
QC G+ G+ S C CN T V G CD C TG C C G
Sbjct: 451 QCRDGFFGLSISDRLGCRRCQCNARGT-VPGSTPCDPNSGSCYCKRLVTGRGCDRCLPGH 509
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G + GCR CDC+ G ++ CD TG+C C+ + G+ CE+ PGY+
Sbjct: 510 WGLSHDLLGCRPCDCDV-GGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGYF 560
Score = 156 (60.0 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 34/96 (35%), Positives = 46/96 (47%)
Query: 66 CLCNNH----STC-VHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN 120
C CN S C HG G C C G C C G YG T GC+ C C SH
Sbjct: 783 CQCNPQGSLSSECNPHG-GQC-LCKPGVVGRRCDLCAPGYYGFGPT--GCQACQC-SHEG 837
Query: 121 SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
++ +C+ +G+C+C+ G C+RC G +G P+
Sbjct: 838 ALSSLCEKTSGQCLCRTGAFGLRCDRCQRGQWGFPS 873
Score = 142 (55.0 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 44/153 (28%), Positives = 69/153 (45%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGV----DCSVNCLCNNHSTCVHGIGICDECH-DWTTGD 91
+C++ + +GP + C+ G+ G C C CN T D+CH D ++G
Sbjct: 1009 RCLH-HTEGP--HCAHCKPGFHGQAARQSCH-RCTCNLLGTNPQQCPSPDQCHCDPSSGQ 1064
Query: 92 ----------HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQ 140
C C A ++ N T+ GC+ C C H + G C+ TG+C C+
Sbjct: 1065 CPCLPNVQGPSCDRC-APNFWNLTSGHGCQPCAC--HPSRARGPTCNEFTGQCHCRAGFG 1121
Query: 141 GKNCERCLPGYYGDPTDGGTCYY-QCMARGMLT 172
G+ C C ++GDP G C+ C +RG+ T
Sbjct: 1122 GRTCSECQELHWGDP--GLQCHACDCDSRGIDT 1152
Score = 124 (48.7 bits), Expect = 0.00054, P = 0.00054
Identities = 48/155 (30%), Positives = 59/155 (38%)
Query: 20 RCTVLLLYIFNASLCYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHS-TCVH 76
RCT LL N C + +C +C P C C G C C N + T H
Sbjct: 1037 RCTCNLLGT-NPQQCPSPDQC---HCD-PSSGQCPCLPNVQGPSCD-RCAPNFWNLTSGH 1090
Query: 77 GIGICDECH-DWTTGDHCQ------YCRAGSYGNATTQE------G-----CRKCDCNSH 118
G C CH G C +CRAG +G T E G C CDC+S
Sbjct: 1091 GCQPC-ACHPSRARGPTCNEFTGQCHCRAG-FGGRTCSECQELHWGDPGLQCHACDCDSR 1148
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
G C TG C C+ G C++C G+ G
Sbjct: 1149 GIDT-PQCHRFTGHCSCRPGVSGVRCDQCARGFSG 1182
Score = 123 (48.4 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRAGSYGNAT---TQEG----CRKCDCNSHGNS------ 121
VHG IC H+ T G +C+ C+ Y + ++G CRKC+C+ H +S
Sbjct: 306 VHGACICK--HN-TRGLNCEQCQ-DFYRDLPWRPAEDGHSHACRKCECHGHTHSCHFDMA 361
Query: 122 VLGVCDSITGE-CI-CQDNTQGKNCERCLPGYYGDPT 156
V +++G C CQ NT G++CE C P +Y DPT
Sbjct: 362 VYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPT 398
Score = 63 (27.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 302 PDKCPENRTC----INNQCVCPPRRTGPDCQEEICPNECHEFLNHG 343
P +CP C + QC C P GP C + PN + HG
Sbjct: 1047 PQQCPSPDQCHCDPSSGQCPCLPNVQGPSC-DRCAPNFWNLTSGHG 1091
Score = 51 (23.0 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 300 SCPDKCPENRTCINN-----QCVCPPRRT-GPDCQEEICPNECH 337
SC D+C N + + C C P R GP C E +CH
Sbjct: 1075 SC-DRCAPNFWNLTSGHGCQPCACHPSRARGPTCNE--FTGQCH 1115
Score = 46 (21.3 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 326 DCQEE-ICPNECHEFLNHGTCDLLLTGV 352
DC I +CH F H +C ++GV
Sbjct: 1144 DCDSRGIDTPQCHRFTGHCSCRPGVSGV 1171
Score = 44 (20.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 314 NQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLL 348
++C C T P Q+ P++CH + G C L
Sbjct: 1036 HRCTCNLLGTNP--QQCPSPDQCHCDPSSGQCPCL 1068
Score = 38 (18.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 315 QCVCPPRRTGPDCQEEIC 332
QC+C P G C ++C
Sbjct: 801 QCLCKPGVVGRRC--DLC 816
>ZFIN|ZDB-GENE-030131-9823 [details] [associations]
symbol:lama5 "laminin, alpha 5" species:7955
"Danio rerio" [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0033333 "fin development" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0035141 "medial fin morphogenesis"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0033334
"fin morphogenesis" evidence=IMP] InterPro:IPR000742
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
PROSITE:PS50026 ZFIN:ZDB-GENE-030131-9823 GO:GO:0008104
GO:GO:0030155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016337 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
eggNOG:COG0419 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OrthoDB:EOG4VHK5G GO:GO:0035138 EMBL:DQ232730 IPI:IPI00734953
RefSeq:NP_001034260.1 UniGene:Dr.12091 ProteinModelPortal:Q2Q1W5
STRING:Q2Q1W5 PRIDE:Q2Q1W5 GeneID:321243 KEGG:dre:321243
NextBio:20807298 ArrayExpress:Q2Q1W5 Bgee:Q2Q1W5 GO:GO:0035141
Uniprot:Q2Q1W5
Length = 3664
Score = 197 (74.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 52/147 (35%), Positives = 64/147 (43%)
Query: 43 CKGPPDY---SCQ-CELGW----TGV---DCSVNCLCNNHST-CVHGIGICDECHDWTTG 90
C P +Y SCQ C G+ G+ C V C CN HS C+ G GIC C T G
Sbjct: 1810 CLCPGNYLGDSCQQCAPGYYRDNKGLFLGKC-VPCNCNGHSDQCLDGSGICVNCRHNTAG 1868
Query: 91 DHCQYCRAGSYGNATTQE---GCRKCDCN---SHGNSVLGVCDSITG-ECICQDNTQGKN 143
+HC+ C G + N T C C C + N + + C+C G
Sbjct: 1869 NHCEKCLGGFHHNNTVDGHSVSCSSCPCPLQVASNNFAIRCVEKPNNMRCLCMPGYAGSK 1928
Query: 144 CERCLPGYYGDPTD-GGTCYYQCMARG 169
CERC PGYYG+P G TC C G
Sbjct: 1929 CERCAPGYYGNPVVIGSTCQ-PCNCNG 1954
Score = 188 (71.2 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 49/153 (32%), Positives = 66/153 (43%)
Query: 20 RCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNN-HSTCVHGI 78
RC + Y S C +C GY P C+ +C+ N N S C
Sbjct: 1917 RCLCMPGYA--GSKC-ERCAPGYYGNPVVIGSTCQ----PCNCNGNSDPNMLFSDCHPLT 1969
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
G C C T G HC+ C G YG+A T + C +C+C+ G + CDS TG+C C+
Sbjct: 1970 GECQSCMHNTAGPHCEICAPGFYGDAITAKNCTRCNCSPCGTAH---CDSHTGQCHCKPG 2026
Query: 139 TQGKNCERCLPGYYGDPTDGGTCYYQCMARGML 171
G C+RC G +G + G C A L
Sbjct: 2027 VVGAQCDRCEHGTFGFDSCTGCRKCDCDASAAL 2059
Score = 188 (71.2 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 70/256 (27%), Positives = 108/256 (42%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG 102
C+ P + C +G +CS + + +C G C C + G C C G YG
Sbjct: 1495 CE-PQTFGCHPLVGCEMCNCSRPGVTSMDISCDTNNGQC-RCRNNIVGRQCDRCFPGFYG 1552
Query: 103 NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG-YYGDPTDGGTC 161
CR C+CN G + VCDS TG C+C++N +G C++C G ++ DPT+ C
Sbjct: 1553 ----YPNCRPCNCNEAGTE-MNVCDSFTGRCLCKENVEGPRCDQCKLGTFHLDPTNAKGC 1607
Query: 162 YYQCMARGMLTG-PGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILL 220
+C G S + + W + +E + LD + AD+ +
Sbjct: 1608 T-KCFCFGATDRCHSSDKRRSEIMDMAGWVLLRSDRQEVP--VSTYLDQD-LVEADLSDV 1663
Query: 221 RLQPDINVPCNENAVYIYDGLPDFVTSVGG-----THQSTTLG-VFCTEDMHRGYEVLEA 274
PD++ + +A Y G D V+S GG H T G F + R +L
Sbjct: 1664 ---PDVSQDLHWHAPQAYHG--DKVSSYGGYLRYRLHTQTMRGDAFLMVETIRPDVIL-- 1716
Query: 275 KSGVMTIHYKQGK-PS 289
K MT+ Y + + PS
Sbjct: 1717 KGNQMTLVYMEREYPS 1732
Score = 182 (69.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 42/129 (32%), Positives = 63/129 (48%)
Query: 41 GYCKGPPDYS---C-QCELGWTGV-DCSVNCLCNNHSTCVHGIGICDECHDWT--TGDHC 93
G C P+++ C QC+ G+ +C V C C+ ++ D+C+ +G C
Sbjct: 591 GRCLCRPEFTGPRCDQCQSGFHSYPNCQV-CTCDPRTSLDSSCSELDQCNCRPNYSGPRC 649
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
Q C G Y + C CDC+ G S CD ++G+C+C N +G+ C+ C PG YG
Sbjct: 650 QQCAPGYY----SYPSCTPCDCSVEG-SRSSSCDPVSGQCVCLPNIEGQRCDSCSPGSYG 704
Query: 154 DPT-DGGTC 161
P GTC
Sbjct: 705 FPLCQLGTC 713
Score = 181 (68.8 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 43/128 (33%), Positives = 64/128 (50%)
Query: 51 CQ-CELGWTGVDCSV-NCLCNNHSTCVHGIGICD----ECH--DWTTGDHCQYCRAGSYG 102
C+ C G+ G + NC N S C G CD +CH G C C G++G
Sbjct: 1984 CEICAPGFYGDAITAKNCTRCNCSPC--GTAHCDSHTGQCHCKPGVVGAQCDRCEHGTFG 2041
Query: 103 -NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
++ T GCRKCDC++ +++ CD + G C CQ G NC +C PG++ ++G C
Sbjct: 2042 FDSCT--GCRKCDCDASA-ALVQACDPVNGACACQPGVNGPNCHQCAPGHWNYSSNG--C 2096
Query: 162 YYQCMARG 169
+C +G
Sbjct: 2097 R-KCECKG 2103
Score = 173 (66.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 38/123 (30%), Positives = 59/123 (47%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDWTTGDH 92
CY I G + + CE G + + +C + + TCV C TG+H
Sbjct: 463 CYQVLINGEVRPAGENIIDCECNAAGTEGN-SCRPDPRTNTCV--------CKPEFTGEH 513
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C C G + C++C C+ G + G CD++TG+C+C+ QG +CE+C PGY+
Sbjct: 514 CDTCSHGYFSI-----NCQRCQCSGQG-CLDGSCDAVTGQCVCRSGFQGYSCEQCAPGYF 567
Query: 153 GDP 155
P
Sbjct: 568 NYP 570
Score = 168 (64.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 41 GYCKGPPDY---SC-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
G C+ P+ C QC G+ G C C + C G C C T C C
Sbjct: 1438 GQCRCRPNVIGRDCSQCATGYYGFPNCRPCNCGSR-LCEPVTGECI-CPPRTLQPDCVTC 1495
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCLPGYYGDP 155
++G GC C+C+ G + + + CD+ G+C C++N G+ C+RC PG+YG P
Sbjct: 1496 EPQTFG-CHPLVGCEMCNCSRPGVTSMDISCDTNNGQCRCRNNIVGRQCDRCFPGFYGYP 1554
Score = 161 (61.7 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 36/104 (34%), Positives = 49/104 (47%)
Query: 76 HGIGICDECHDWTTGDHCQYCRAGSYGNAT----TQEGCRKCDCNSHGNSVLGVCDSITG 131
+G G+C EC TTG +C+ C G Y + + C KC C S G C+ TG
Sbjct: 380 NGGGVCVECQHHTTGVNCERCIPGYYRSPDHPLESPFACSKCQCESEFTE--GTCEDRTG 437
Query: 132 ECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPG 175
C C+ N G+NC++C GY P CY Q + G + G
Sbjct: 438 RCYCKPNYTGENCDQCAEGYEHFPE----CY-QVLINGEVRPAG 476
Score = 148 (57.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 40/127 (31%), Positives = 51/127 (40%)
Query: 42 YCK-GPPDYSC-QCELGWTGVDCSVNCL---CNNHSTCVHGI----GICDECHDWTTGDH 92
+CK G C +CE G G D C C+ + V G C C G +
Sbjct: 2022 HCKPGVVGAQCDRCEHGTFGFDSCTGCRKCDCDASAALVQACDPVNGAC-ACQPGVNGPN 2080
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C C G + ++ GCRKC+C G CD TGEC C GK C+ CL +
Sbjct: 2081 CHQCAPGHWNYSSN--GCRKCECKG------GRCDPRTGECRCTTGLTGKQCDTCL-SQH 2131
Query: 153 GDPTDGG 159
P G
Sbjct: 2132 SVPVQNG 2138
Score = 130 (50.8 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 46/142 (32%), Positives = 59/142 (41%)
Query: 43 CKGPPDYS---CQ-CELGW------TGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDH 92
C P+YS CQ C G+ T DCSV + S+C G C C G
Sbjct: 638 CNCRPNYSGPRCQQCAPGYYSYPSCTPCDCSVEG--SRSSSCDPVSGQC-VCLPNIEGQR 694
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C C GSYG Q G CN G+ + ++ G C+C+ +G CERC P Y+
Sbjct: 695 CDSCSPGSYGFPLCQLGT----CNPAGSVHNDILPTV-GSCVCRPYVEGVACERCKPLYW 749
Query: 153 G-DP-TDGGTCYYQCMARGMLT 172
P T G C G L+
Sbjct: 750 NLSPDTIYGCSTCDCNTAGTLS 771
Score = 119 (46.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/98 (27%), Positives = 41/98 (41%)
Query: 56 GWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCD 114
G + DC+ + + C G C C C C+ G + + GC+ C
Sbjct: 758 GCSTCDCNTAGTLSEVAECTQRTGQCF-CKPNVCSGTCNVCKDGFFNLQKDSYFGCQGCQ 816
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ G SV CD G C C+ N +G C++ P +Y
Sbjct: 817 CDI-GGSVGQACDERYGRCRCRPNVEGPKCKQPRPDHY 853
Score = 118 (46.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 38/124 (30%), Positives = 51/124 (41%)
Query: 61 DCSVN--CLCNNHSTCVHGIGICD------ECHDWTTGDHCQYCRAG----SYGNATTQE 108
D S+ C+CN H+ + D +C T G C C G + ATT
Sbjct: 285 DISIGGRCVCNGHAEACNAQDPNDPYKLQCDCQHNTCGTSCDGCCPGFNQFPWKPATTYS 344
Query: 109 G--CRKCDCNSHGN------------SVLGVCDSITGE--CI-CQDNTQGKNCERCLPGY 151
C C+C+ H + S L + G C+ CQ +T G NCERC+PGY
Sbjct: 345 ANECEPCNCHRHSSECYYDPEIDQRRSSLDMQGEYNGGGVCVECQHHTTGVNCERCIPGY 404
Query: 152 YGDP 155
Y P
Sbjct: 405 YRSP 408
Score = 105 (42.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
G C C+ G + C+S G+C C+ N G++C +C GYYG P
Sbjct: 1417 GAVPCGCHEVG-AESDTCESFGGQCRCRPNVIGRDCSQCATGYYGFP 1462
Score = 76 (31.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 296 YQIFSC-PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNE---CHEFLNHGTCDLLL 349
Y +C P C +R C + +C+CPPR PDC C + CH + C+
Sbjct: 1459 YGFPNCRPCNCG-SRLCEPVTGECICPPRTLQPDCVT--CEPQTFGCHPLVGCEMCNCSR 1515
Query: 350 TGV 352
GV
Sbjct: 1516 PGV 1518
Score = 69 (29.3 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 291 GFNA--TYQIFSCPDKCPENRTCIN-NQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDL 347
GF++ Q+ +C + + +C +QC C P +GP CQ+ C + + + CD
Sbjct: 610 GFHSYPNCQVCTCDPRTSLDSSCSELDQCNCRPNYSGPRCQQ--CAPGYYSYPSCTPCDC 667
Query: 348 LLTG 351
+ G
Sbjct: 668 SVEG 671
Score = 63 (27.2 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 25/77 (32%), Positives = 32/77 (41%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDL---L---LTGV 352
C + E+ TC QC C P G DC + C + F N C+ L +TG
Sbjct: 1423 CHEVGAESDTCESFGGQCRCRPNVIGRDCSQ--CATGYYGFPNCRPCNCGSRLCEPVTGE 1480
Query: 353 HITHGRTLHYQVDLIRC 369
I RTL Q D + C
Sbjct: 1481 CICPPRTL--QPDCVTC 1495
Score = 63 (27.2 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 300 SCPDKC-PENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
S P+ C P R C+C P TGP C + C + H + N C
Sbjct: 582 SIPEMCDPAGR------CLCRPEFTGPRCDQ--CQSGFHSYPNCQVC 620
Score = 53 (23.7 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 303 DKC-PENRTCINNQCVCPPRRTGPDC 327
+ C P+ RT N CVC P TG C
Sbjct: 492 NSCRPDPRT---NTCVCKPEFTGEHC 514
Score = 52 (23.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 312 INNQCVCPPRRTGPDCQE 329
+N C C P GP+C +
Sbjct: 2066 VNGACACQPGVNGPNCHQ 2083
Score = 48 (22.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 278 VMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQ-CVCPPRRTGPDCQE 329
+ +H Q S A + + P R N + C+CP G CQ+
Sbjct: 1774 IRALH-SQSAQSVSLRAA--VLEVAENMPSGRHANNVEICLCPGNYLGDSCQQ 1823
Score = 48 (22.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEF--LNHGTCD 346
C + + +C ++ QCVC P G C C + F GTC+
Sbjct: 667 CSVEGSRSSSCDPVSGQCVCLPNIEGQRCDS--CSPGSYGFPLCQLGTCN 714
Score = 45 (20.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEF--LNH 342
+C C P GP C++ P H F L+H
Sbjct: 833 RCRCRPNVEGPKCKQ---PRPDHYFPDLHH 859
Score = 43 (20.2 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 290 EGFNATYQIFSCPDKCPENR---TCI---NN-QCVCPPRRTGPDCQ 328
+G + + CP + N C+ NN +C+C P G C+
Sbjct: 1885 DGHSVSCSSCPCPLQVASNNFAIRCVEKPNNMRCLCMPGYAGSKCE 1930
Score = 42 (19.8 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 300 SCPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
+C + E C +C+C GP C +
Sbjct: 1560 NCNEAGTEMNVCDSFTGRCLCKENVEGPRCDQ 1591
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 289 SEG-FNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
S G F+ Q C + + +C + QCVC G C E+ P + N+ C
Sbjct: 518 SHGYFSINCQRCQCSGQGCLDGSCDAVTGQCVCRSGFQGYSC-EQCAPG----YFNYPLC 572
>RGD|1305653 [details] [associations]
symbol:Pear1 "platelet endothelial aggregation receptor 1"
species:10116 "Rattus norvegicus" [GO:0001891 "phagocytic cup"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0043654 "recognition of
apoptotic cell" evidence=IEA;ISO] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
RGD:1305653 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 OMA:PPGTWGF
IPI:IPI00914278 Ensembl:ENSRNOT00000019502 UCSC:RGD:1305653
ArrayExpress:E9PTZ1 Uniprot:E9PTZ1
Length = 1033
Score = 166 (63.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 53/157 (33%), Positives = 64/157 (40%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------------LCNNHSTCVHGIG 79
LC +C++G C P CQC GW G DCS C LC N S+C G
Sbjct: 102 LCAQECVHGRCVAPN--RCQCAPGWRGDDCSSECAPGMWGPQCDRLCLCGNSSSCDPRSG 159
Query: 80 ICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
+C C C Q C G YG A C+ DC+ +G S CD G C C
Sbjct: 160 VCF-CPSGLQPPDCLQPCPDGHYGPA-----CQ-FDCHCYGAS----CDPRDGACFCPPG 208
Query: 139 TQGKNCERCLPGYYGDPTDGGTC--YYQCMARGMLTG 173
G +C +P G TDG C Y C G+ G
Sbjct: 209 RTGPSCN--VPCSQG--TDGFFCPRTYPCQNGGVPQG 241
Score = 162 (62.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 50/153 (32%), Positives = 63/153 (41%)
Query: 39 IYGYCK---GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
++G+C+ G C C G+ G +CS C C N TCV G C C G C
Sbjct: 546 VHGHCRCQAGWMGTRCHLPCPEGFWGANCSNACTCKNGGTCVPENGNC-VCAPGFRGPSC 604
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGY 151
Q C G YG C C CN+H + C G C C G +C E C PG+
Sbjct: 605 QRPCPPGRYGKR-----CVPCKCNNHSS-----CHPSDGTCSCLAGWTGPDCSESCPPGH 654
Query: 152 YG----DPTD---GGTCYYQ---CMARGMLTGP 174
+G P G TC+ Q C+ TGP
Sbjct: 655 WGLKCSQPCQCHHGATCHPQDGSCVCIPGRTGP 687
Score = 160 (61.4 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 44/141 (31%), Positives = 62/141 (43%)
Query: 46 PPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGIC--DE----CHDWTTGDH 92
P C C+ GW G+ C+ +C C H C+HG G+C D C TG H
Sbjct: 373 PMHGECSCQPGWAGLHCNESCPQDTHGAGCQEHCLCLHG-GVCLADSGLCRCAPGYTGPH 431
Query: 93 C-QYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLP 149
C C +YG N ++ C C N++ C + G CIC++ Q NC C P
Sbjct: 432 CANLCPPNTYGINCSSH-----CSCE---NAI--ACSPVDGTCICKEGWQRGNCSVPCPP 481
Query: 150 GYYGDPTDGGTCYYQCMARGM 170
G +G + +C QC G+
Sbjct: 482 GTWGFSCNA-SC--QCAHEGV 499
Score = 158 (60.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 47/153 (30%), Positives = 62/153 (40%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
C G+ +G + S C G G C+ +C C + C G C W G HCQ C
Sbjct: 466 CKEGWQRG--NCSVPCPPGTWGFSCNASCQCAHEGVCSPQTGACTCTPGWR-GVHCQLPC 522
Query: 97 RAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYGD 154
G +G EGC CDC+ H + CD + G C CQ G C C G++G
Sbjct: 523 PKGQFG-----EGCASVCDCD-HSDG----CDPVHGHCRCQAGWMGTRCHLPCPEGFWGA 572
Query: 155 PT-------DGGTCYYQ---CMARGMLTGPGPQ 177
+GGTC + C+ GP Q
Sbjct: 573 NCSNACTCKNGGTCVPENGNCVCAPGFRGPSCQ 605
Score = 152 (58.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 46/134 (34%), Positives = 55/134 (41%)
Query: 30 NASLCYN--KCI--YGYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGI 80
NA C N C+ G C P + SCQ C G G C V C CNNHS+C G
Sbjct: 576 NACTCKNGGTCVPENGNCVCAPGFRGPSCQRPCPPGRYGKRC-VPCKCNNHSSCHPSDGT 634
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C WT D + C G +G +Q C C+ HG C G C+C
Sbjct: 635 CSCLAGWTGPDCSESCPPGHWGLKCSQP----CQCH-HG----ATCHPQDGSCVCIPGRT 685
Query: 141 GKNC-ERCLPGYYG 153
G NC E C +G
Sbjct: 686 GPNCSEGCPSRMFG 699
Score = 148 (57.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 46/144 (31%), Positives = 56/144 (38%)
Query: 30 NASLCYNKCIYGYCKGPPDY---SC--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N LC G C P Y C +C +G G DC+ C C + C G C C
Sbjct: 278 NGGLCDR--FTGQCHCAPGYIGDRCREECPVGRFGQDCAETCDCAPGARCFPANGAC-LC 334
Query: 85 HDWTTGDHC--QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
TGD C + C G YG + Q+ C CD H S C + GEC CQ G
Sbjct: 335 EHGFTGDRCTERLCPDGRYG-LSCQDPCT-CD-PEHSLS----CHPMHGECSCQPGWAGL 387
Query: 143 NCERCLPGYYGDPTDGGTCYYQCM 166
+C P T G C C+
Sbjct: 388 HCNESCP----QDTHGAGCQEHCL 407
Score = 139 (54.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 43/129 (33%), Positives = 52/129 (40%)
Query: 50 SCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICD----ECH--DWTTGDHC-QY 95
SC C GW GV CS+ C C C +G G+CD +CH GD C +
Sbjct: 245 SCSCPPGWMGVICSLPCPEGFHGPNCTQECRCHNG-GLCDRFTGQCHCAPGYIGDRCREE 303
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLP-GYYG 153
C G +G Q+ CDC C G C+C+ G C ER P G YG
Sbjct: 304 CPVGRFG----QDCAETCDCAPGAR-----CFPANGACLCEHGFTGDRCTERLCPDGRYG 354
Query: 154 -DPTDGGTC 161
D TC
Sbjct: 355 LSCQDPCTC 363
Score = 135 (52.6 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 40/128 (31%), Positives = 57/128 (44%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC--VHGIGICDECHDW 87
++ LC +C GY GP + C G++CS +C C N C V G IC E W
Sbjct: 417 DSGLC--RCAPGYT-GPHCANL-CPPNTYGINCSSHCSCENAIACSPVDGTCICKE--GW 470
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER- 146
G+ C G++G + C C +H GVC TG C C +G +C+
Sbjct: 471 QRGNCSVPCPPGTWGFSCNAS----CQC-AHE----GVCSPQTGACTCTPGWRGVHCQLP 521
Query: 147 CLPGYYGD 154
C G +G+
Sbjct: 522 CPKGQFGE 529
Score = 120 (47.3 bits), Expect = 0.00079, P = 0.00079
Identities = 38/124 (30%), Positives = 52/124 (41%)
Query: 37 KCI-YGYCKGPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGI------GICD 82
KC + C P D +C C GWTG DCS +C C+ C HG G C
Sbjct: 621 KCNNHSSCH-PSDGTCSCLAGWTGPDCSESCPPGHWGLKCSQPCQCHHGATCHPQDGSC- 678
Query: 83 ECHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
C TG +C + C + +G +Q C C+ G +C TG C+C G
Sbjct: 679 VCIPGRTGPNCSEGCPSRMFGVNCSQ----LCQCDP-GE----MCHPETGACVCPPGHSG 729
Query: 142 KNCE 145
+C+
Sbjct: 730 AHCK 733
Score = 81 (33.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 300 SCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPN 334
S P +C TC + CVC P RTGP+C E CP+
Sbjct: 660 SQPCQCHHGATCHPQDGSCVCIPGRTGPNCSEG-CPS 695
Score = 74 (31.1 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 18/46 (39%), Positives = 20/46 (43%)
Query: 290 EGFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
EGF +C C TC+ N CVC P GP CQ CP
Sbjct: 567 EGFWGANCSNACT--CKNGGTCVPENGNCVCAPGFRGPSCQRP-CP 609
Score = 68 (29.0 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 300 SCPDKC---PENR-TC--INNQCVCPPRRTGPDCQEEICPNECH 337
SC D C PE+ +C ++ +C C P G C E CP + H
Sbjct: 356 SCQDPCTCDPEHSLSCHPMHGECSCQPGWAGLHCNES-CPQDTH 398
Score = 65 (27.9 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
P KC + +C + C C TGPDC E CP
Sbjct: 619 PCKCNNHSSCHPSDGTCSCLAGWTGPDCSES-CP 651
Score = 61 (26.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 16/46 (34%), Positives = 19/46 (41%)
Query: 290 EGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
EGF+ C +C C QC C P G C+EE CP
Sbjct: 263 EGFHGPNCTQEC--RCHNGGLCDRFTGQCHCAPGYIGDRCREE-CP 305
Score = 61 (26.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 19/58 (32%), Positives = 22/58 (37%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHG 357
SC CP + CP GP+C +E C CH N G CD H G
Sbjct: 245 SC--SCPPGWMGVICSLPCPEGFHGPNCTQE-C--RCH---NGGLCDRFTGQCHCAPG 294
Score = 59 (25.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 305 CPENRTCI--NNQCVCPPRRTGPDCQEEICPN 334
C C N C+C TG C E +CP+
Sbjct: 319 CAPGARCFPANGACLCEHGFTGDRCTERLCPD 350
Score = 57 (25.1 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 281 IHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHE 338
+H + P + A Q C C C+ + C C P TGP C +CP +
Sbjct: 387 LHCNESCPQDTHGAGCQEH-C--LCLHGGVCLADSGLCRCAPGYTGPHCAN-LCPPNTYG 442
Query: 339 F--LNHGTCD 346
+H +C+
Sbjct: 443 INCSSHCSCE 452
Score = 55 (24.4 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 285 QGKPSEGFNATY-QIFSC-P-DKC-PENRTCINNQCVCPPRRTGPDCQ 328
+G PS F Q+ C P + C PE CVCPP +G C+
Sbjct: 691 EGCPSRMFGVNCSQLCQCDPGEMCHPET-----GACVCPPGHSGAHCK 733
Score = 50 (22.7 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 304 KC-PENRTCI------NNQC---VCPPRRTGPDCQEEI-CPNE----CHEFLNHGTC 345
+C P N C+ ++C +CP R G CQ+ C E CH HG C
Sbjct: 324 RCFPANGACLCEHGFTGDRCTERLCPDGRYGLSCQDPCTCDPEHSLSCHPM--HGEC 378
Score = 44 (20.5 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 13/39 (33%), Positives = 14/39 (35%)
Query: 299 FSCPD--KCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
FSC +C C C C P G CQ CP
Sbjct: 486 FSCNASCQCAHEGVCSPQTGACTCTPGWRGVHCQLP-CP 523
>MGI|MGI:99915 [details] [associations]
symbol:Lamb3 "laminin, beta 3" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0005610 "laminin-5
complex" evidence=IDA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0050873
"brown fat cell differentiation" evidence=IDA] MGI:MGI:99915
GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:CH466555 GO:GO:0005610
GeneTree:ENSGT00620000087753 CTD:3914 eggNOG:NOG289025
HOGENOM:HOG000113279 HOVERGEN:HBG052302 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z ChiTaRS:LAMB3 EMBL:U43298 EMBL:AK155769
EMBL:BC008516 IPI:IPI00117093 RefSeq:NP_032510.2 UniGene:Mm.435441
ProteinModelPortal:Q61087 SMR:Q61087 STRING:Q61087
PhosphoSite:Q61087 PaxDb:Q61087 PRIDE:Q61087
Ensembl:ENSMUST00000016315 Ensembl:ENSMUST00000159955 GeneID:16780
KEGG:mmu:16780 InParanoid:Q91V90 NextBio:290632 Bgee:Q61087
CleanEx:MM_LAMB3 Genevestigator:Q61087
GermOnline:ENSMUSG00000026639 Uniprot:Q61087
Length = 1168
Score = 190 (71.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 40/125 (32%), Positives = 62/125 (49%)
Query: 35 YNKCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
YN + +G + CQ C+ C + S +G G+CD C D T G +C
Sbjct: 294 YNNRPWRPAEGQDTHECQRCDCNGHSETCHFDPAVFAASQGTNG-GVCDNCRDHTEGKNC 352
Query: 94 QYCRAGSYGN----ATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCL 148
+ C+ + N A E C C+C+ G +V G CD +TG+C+C++ QG+ C+ C
Sbjct: 353 ERCQLHYFRNRRPSAPIHETCIPCECDPDG-AVQGAPCDRLTGQCVCKEYVQGERCDLCK 411
Query: 149 PGYYG 153
PG+ G
Sbjct: 412 PGFTG 416
Score = 138 (53.6 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 25/80 (31%), Positives = 37/80 (46%)
Query: 74 CVHGIGICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
C G C C ++ G+ C C+ G G +GC CDC+ G C+ TG
Sbjct: 389 CDRLTGQC-VCKEYVQGERCDLCKPGFTGLTFANPKGCHACDCSILGARKDMPCEEETGR 447
Query: 133 CICQDNTQGKNCERCLPGYY 152
C+C N G C++C P ++
Sbjct: 448 CLCLPNVVGPKCDQCAPSHW 467
Score = 134 (52.2 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 46/161 (28%), Positives = 64/161 (39%)
Query: 8 SGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDY---SC-QCELG-W---TG 59
+GLT A C +L C + G C P+ C QC W +G
Sbjct: 415 TGLTFANPKGCHACDCSILGARKDMPCEEET--GRCLCLPNVVGPKCDQCAPSHWKLASG 472
Query: 60 VDCSVNCLCNNH----STCVHGIGICDECHDWTTGDHC-----QYCRAGSYGNATTQEGC 110
+ C C C+ S C G C C + G C + C +YG+ T GC
Sbjct: 473 LGCEP-CACDPRNSLSSQCNQFTGQCP-CREGFGGLTCSSAAIRQCPDQTYGHVAT--GC 528
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
R CDC+ G G CD +G C+C+ G C++C G+
Sbjct: 529 RACDCDFRGTEGPG-CDKASGRCLCRPGFTGPRCDQCQRGH 568
Score = 121 (47.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 40/132 (30%), Positives = 55/132 (41%)
Query: 50 SCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ-- 107
SC C G C+ N +T V +C C T G +C C A Y N +
Sbjct: 249 SCFCH-GHAD-RCAPNP--GGSTTAVQVNNVC-VCQHNTAGPNCDRC-APFYNNRPWRPA 302
Query: 108 EG-----CRKCDCNSHGNS------VLGVCDSITGE-CI-CQDNTQGKNCERCLPGYYGD 154
EG C++CDCN H + V G C C+D+T+GKNCERC Y+ +
Sbjct: 303 EGQDTHECQRCDCNGHSETCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRN 362
Query: 155 PTDGGTCYYQCM 166
+ C+
Sbjct: 363 RRPSAPIHETCI 374
Score = 112 (44.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 37/126 (29%), Positives = 47/126 (37%)
Query: 56 GWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDC 115
G DCS+ C G C C G C C A S+ + GC C C
Sbjct: 424 GCHACDCSI-LGARKDMPCEEETGRC-LCLPNVVGPKCDQC-APSHWKLASGLGCEPCAC 480
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCE-----RCLPGYYGDPTDG-GTCYYQCMARG 169
+ NS+ C+ TG+C C++ G C +C YG G C C RG
Sbjct: 481 DPR-NSLSSQCNQFTGQCPCREGFGGLTCSSAAIRQCPDQTYGHVATGCRAC--DCDFRG 537
Query: 170 MLTGPG 175
GPG
Sbjct: 538 T-EGPG 542
Score = 56 (24.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 297 QIFSCPDKCPE-NRTC-INNQCVCPPRRTGPDCQEEICPNE 335
++ S PD P N+ C + Q C P G DC E+CP +
Sbjct: 769 EMASLPDLTPTINKLCGRSRQTACTP---G-DCPGELCPQD 805
Score = 49 (22.3 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
C + E C + +C+C P TGP C +
Sbjct: 533 CDFRGTEGPGCDKASGRCLCRPGFTGPRCDQ 563
Score = 44 (20.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 315 QCVCPPRRTGPDCQE 329
+C+C P GP C +
Sbjct: 447 RCLCLPNVVGPKCDQ 461
>FB|FBgn0027594 [details] [associations]
symbol:drpr "draper" species:7227 "Drosophila melanogaster"
[GO:0007155 "cell adhesion" evidence=ISS] [GO:0008345 "larval
locomotory behavior" evidence=IMP] [GO:0006909 "phagocytosis"
evidence=IMP;TAS] [GO:0031224 "intrinsic to membrane" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016322 "neuron
remodeling" evidence=IMP] [GO:0035212 "cell competition in a
multicellular organism" evidence=IMP] [GO:0048190 "wing disc
dorsal/ventral pattern formation" evidence=IGI] [GO:0043277
"apoptotic cell clearance" evidence=IMP] [GO:0035071 "salivary
gland cell autophagic cell death" evidence=IMP] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0048190 EMBL:AE014296 GO:GO:0016322 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0008345 GO:GO:0035071
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0031224
GO:GO:0043277 Pfam:PF12661 GO:GO:0035212
GeneTree:ENSGT00690000101914 RefSeq:NP_728660.2 UniGene:Dm.3167
ProteinModelPortal:Q9W0A0 SMR:Q9W0A0 DIP:DIP-19640N
MINT:MINT-7555415 STRING:Q9W0A0 EnsemblMetazoa:FBtr0072799
GeneID:38218 KEGG:dme:Dmel_CG2086 UCSC:CG2086-RB CTD:38218
FlyBase:FBgn0027594 InParanoid:Q9W0A0 OMA:ALCDHIS OrthoDB:EOG4RXWF6
ChiTaRS:drpr GenomeRNAi:38218 NextBio:807575 Bgee:Q9W0A0
Uniprot:Q9W0A0
Length = 1031
Score = 179 (68.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 39/107 (36%), Positives = 57/107 (53%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCR 111
C+L G DC+ C C+N++ C G C WT G+ C+ C G +G+ Q+ C+
Sbjct: 479 CDLNHFGQDCAKVCDCHNNAACNPQNGSCTCAAGWT-GERCERKCDTGKFGHDCAQK-CQ 536
Query: 112 KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYGDPTD 157
CD N NS+ CD+ G C+C+ + G +CE C GYYG+ D
Sbjct: 537 -CDFN---NSL--ACDATNGRCVCKQDWGGVHCETNCRSGYYGENCD 577
Score = 169 (64.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 44/119 (36%), Positives = 56/119 (47%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QY 95
KC +GY G P C GW G +CS+ C C N++ C G C EC TG C
Sbjct: 118 KCDHGY--GGPACDINCPPGWYGRNCSMQCDCLNNAVCEPFSGDC-ECAKGYTGARCADI 174
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG 153
C G +G A E CR C+ +G G C ++GEC C G C+ RC G +G
Sbjct: 175 CPEGFFG-ANCSEKCR-CE---NG----GKCHHVSGECQCAPGFTGPLCDMRCPDGKHG 224
Score = 166 (63.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 50/137 (36%), Positives = 58/137 (42%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGV-------------DCSVNCLC--NNHSTCVHGI 78
C+N C P + SC C GWTG DC+ C C NN C
Sbjct: 494 CHNNAA---CN-PQNGSCTCAAGWTGERCERKCDTGKFGHDCAQKCQCDFNNSLACDATN 549
Query: 79 GICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C DW G HC+ CR+G YG E C K C NS CD +G CIC
Sbjct: 550 GRCVCKQDWG-GVHCETNCRSGYYG-----ENCDKV-CRCLNNSS---CDPDSGNCICSA 599
Query: 138 NTQGKNC-ERCLPGYYG 153
G +C E C PG+YG
Sbjct: 600 GWTGADCAEPCPPGFYG 616
Score = 155 (59.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 45/131 (34%), Positives = 56/131 (42%)
Query: 29 FNASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDE 83
FN SL + G C D+ C+ C G+ G +C C C N+S+C G C
Sbjct: 539 FNNSLACD-ATNGRCVCKQDWGGVHCETNCRSGYYGENCDKVCRCLNNSSCDPDSGNCIC 597
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
WT D + C G YG E +C HGN CD ITGE +C+ G
Sbjct: 598 SAGWTGADCAEPCPPGFYG----MECKERCPEILHGNKS---CDHITGEILCRTGYIGLT 650
Query: 144 CER-CLPGYYG 153
CE C G YG
Sbjct: 651 CEHPCPAGLYG 661
Score = 150 (57.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 44/132 (33%), Positives = 58/132 (43%)
Query: 34 CYN--KC--IYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C N KC + G C+ P ++ C +C G G C +C C N C G C C
Sbjct: 190 CENGGKCHHVSGECQCAPGFTGPLCDMRCPDGKHGAQCQQDCPCQNDGKCQPETGAC-MC 248
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
+ TGD C C GSYG GC++ C+C G C ITG+C C +G+
Sbjct: 249 NPGWTGDVCANKCPVGSYG-----PGCQESCECYK-G----APCHHITGQCECPPGYRGE 298
Query: 143 NC-ERCLPGYYG 153
C + C YG
Sbjct: 299 RCFDECQLNTYG 310
Score = 150 (57.9 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 41/139 (29%), Positives = 59/139 (42%)
Query: 50 SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATT 106
+C+ C G G C + C C + C H G C WT G +C + C +YG
Sbjct: 650 TCEHPCPAGLYGPGCKLKCNCEHGGECNHVTGQCQCLPGWT-GSNCNESCPTDTYG---- 704
Query: 107 QEGC-RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GYYGD--------PT 156
+GC ++C C H VC G CIC+ G C+ P G+YG+ P+
Sbjct: 705 -QGCAQRCRCVHHK-----VCRKADGMCICETGWSGTRCDEVCPEGFYGEHCMNTCACPS 758
Query: 157 DGGTCY--YQCMARGMLTG 173
C+ + C+ R TG
Sbjct: 759 ANFQCHAAHGCVCRSGYTG 777
Score = 143 (55.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 45/140 (32%), Positives = 56/140 (40%)
Query: 34 CYN--KC--IYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
CY C I G C+ PP Y C +C+L G +CS+ C C N + C G C C
Sbjct: 276 CYKGAPCHHITGQCECPPGYRGERCFDECQLNTYGFNCSMTCDCANDAMCDRANGTCI-C 334
Query: 85 HDWTTGDHC--QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
+ TG C + C A YG R C+C+ + C TG C C
Sbjct: 335 NPGWTGAKCAERICEANKYGLDCN----RTCECDMEHTDL---CHPETGNCQCSIGWSSA 387
Query: 143 NCER-CLPGYYGDPTDGGTC 161
C R C YG P TC
Sbjct: 388 QCTRPCTFLRYG-PNCELTC 406
Score = 138 (53.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 46/146 (31%), Positives = 61/146 (41%)
Query: 21 CTVLLLYIFNASL---CYN--KC--IYGYCKGPPDY---SCQ--CELGWTGVDCSVNCLC 68
CT L Y N L C N KC + G C P + +C+ CE G G DC++ C C
Sbjct: 393 CT-FLRYGPNCELTCNCKNGAKCSPVNGTCLCAPGWRGPTCEESCEPGTFGQDCALRCDC 451
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
N + C G C W + C +G Q+ + CDC H N+ C+
Sbjct: 452 QNGAKCEPETGQCLCTAGWKNIKCDRPCDLNHFG----QDCAKVCDC--HNNAA---CNP 502
Query: 129 ITGECICQDNTQGKNCER-CLPGYYG 153
G C C G+ CER C G +G
Sbjct: 503 QNGSCTCAAGWTGERCERKCDTGKFG 528
Score = 137 (53.3 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 36/113 (31%), Positives = 45/113 (39%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCR 111
C G+ G +CS C C N C H G C +C TG C C G +G Q+
Sbjct: 175 CPEGFFGANCSEKCRCENGGKCHHVSGEC-QCAPGFTGPLCDMRCPDGKHGAQCQQD--- 230
Query: 112 KCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYGDPT-DGGTCY 162
C C + G C TG C+C G C +C G YG + CY
Sbjct: 231 -CPCQNDGK-----CQPETGACMCNPGWTGDVCANKCPVGSYGPGCQESCECY 277
Score = 119 (46.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 44/135 (32%), Positives = 52/135 (38%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QY 95
+C G+ GP +C G G C +C C N C G C C+ TGD C
Sbjct: 204 QCAPGFT-GPL-CDMRCPDGKHGAQCQQDCPCQNDGKCQPETGAC-MCNPGWTGDVCANK 260
Query: 96 CRAGSYGNATTQEGC---RKCDCNSHGNSVLGVCDSITGE-CI--CQDNTQGKNCER--- 146
C GSYG QE C + C+ H GE C CQ NT G NC
Sbjct: 261 CPVGSYGPGC-QESCECYKGAPCH-HITGQCECPPGYRGERCFDECQLNTYGFNCSMTCD 318
Query: 147 CLPGYYGDPTDGGTC 161
C D +G TC
Sbjct: 319 CANDAMCDRANG-TC 332
Score = 106 (42.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 30/102 (29%), Positives = 44/102 (43%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYG-NATTQEG 109
+C +G G C +C C + C H G C EC G+ C C+ +YG N +
Sbjct: 260 KCPVGSYGPGCQESCECYKGAPCHHITGQC-ECPPGYRGERCFDECQLNTYGFNCSMTCD 318
Query: 110 CRK---CDCNSHGNSVL--GVCDSITGECICQDNTQGKNCER 146
C CD ++G + G + E IC+ N G +C R
Sbjct: 319 CANDAMCD-RANGTCICNPGWTGAKCAERICEANKYGLDCNR 359
Score = 77 (32.2 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 21/78 (26%), Positives = 32/78 (41%)
Query: 291 GFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLL 348
GFN + +C C + C N C+C P TG C E IC + + TC+
Sbjct: 310 GFNCS---MTCD--CANDAMCDRANGTCICNPGWTGAKCAERICEANKYGLDCNRTCECD 364
Query: 349 LTGVHITHGRTLHYQVDL 366
+ + H T + Q +
Sbjct: 365 MEHTDLCHPETGNCQCSI 382
Score = 67 (28.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 300 SCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
SC +C + C I QC CPP G C +E C + F TCD
Sbjct: 273 SC--ECYKGAPCHHITGQCECPPGYRGERCFDE-CQLNTYGFNCSMTCD 318
Score = 63 (27.2 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 20/60 (33%), Positives = 26/60 (43%)
Query: 304 KCPENRTCI--NNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHG--TCDLLLTG 351
+C N +C + C+C TG DC E C C E L HG +CD + TG
Sbjct: 581 RCLNNSSCDPDSGNCICSAGWTGADCAEPCPPGFYGMECKERCPEIL-HGNKSCDHI-TG 638
Score = 61 (26.5 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNECH 337
C C + QC C P TG +C E CP + +
Sbjct: 670 CEHGGECNHVTGQCQCLPGWTGSNCNES-CPTDTY 703
Score = 61 (26.5 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C C +N C+C P GP C+E P
Sbjct: 408 CKNGAKCSPVNGTCLCAPGWRGPTCEESCEP 438
Score = 57 (25.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 21/69 (30%), Positives = 29/69 (42%)
Query: 290 EGFNATYQIFSCPDKCPE-NRTC-INNQCVCPPRRTGPDCQEEICPNE-CHEFLNHGTCD 346
EGF + + +C CP N C + CVC TG +C E I + N
Sbjct: 743 EGFYGEHCMNTCA--CPSANFQCHAAHGCVCRSGYTGDNCDELIASQRIADQSENSSRAS 800
Query: 347 LLLTGVHIT 355
+ LT V +T
Sbjct: 801 VALTLVLMT 809
Score = 52 (23.4 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 304 KC-PENRTCINNQ------CV--CPPRRTGPDCQEEICPNECHE 338
KC PE C+ N C CP GP CQE C EC++
Sbjct: 238 KCQPETGACMCNPGWTGDVCANKCPVGSYGPGCQES-C--ECYK 278
Score = 50 (22.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 15/53 (28%), Positives = 19/53 (35%)
Query: 305 CPENRTCI--NNQCVCPPRRTGPDCQEEI--------CPNECH-EFLNHGTCD 346
C N C N C C TG C+ + C +C +F N CD
Sbjct: 494 CHNNAACNPQNGSCTCAAGWTGERCERKCDTGKFGHDCAQKCQCDFNNSLACD 546
Score = 45 (20.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 17/60 (28%), Positives = 22/60 (36%)
Query: 301 CPDKCP----ENRTC--INNQCVCPPRRTGPDCQE--------EICPNECHEFLNHGTCD 346
C KC + C N +CVC G C+ E C C LN+ +CD
Sbjct: 531 CAQKCQCDFNNSLACDATNGRCVCKQDWGGVHCETNCRSGYYGENCDKVCR-CLNNSSCD 589
Score = 44 (20.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEE 330
C +CP+ + Q CP + G CQ E
Sbjct: 214 CDMRCPDGKHGAQCQQDCPCQNDGK-CQPE 242
>UNIPROTKB|I3LUK3 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR003659
SMART:SM00423 GeneTree:ENSGT00390000001118 EMBL:CU468352
EMBL:CU915583 EMBL:FP476124 Ensembl:ENSSSCT00000032203
Uniprot:I3LUK3
Length = 1092
Score = 194 (73.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 57 WTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
W+ + C C CN HSTC++ +C++C + TTG CQ C G YG+ T C C C+
Sbjct: 1009 WSFIQCPA-CQCNGHSTCINN-NVCEQCKNLTTGKQCQDCMPGYYGDPTNGGQCTACTCS 1066
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCERC 147
H N +C TG+C C T+G ++C
Sbjct: 1067 GHAN----ICHMHTGKCFC--TTKGIKGDQC 1091
Score = 140 (54.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 110 CRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMAR 168
C C CN H + VC+ C++ T GK C+ C+PGYYGDPT+GG C C
Sbjct: 1014 CPACQCNGHSTCINNNVCEQ------CKNLTTGKQCQDCMPGYYGDPTNGGQCT-ACTCS 1066
Query: 169 G 169
G
Sbjct: 1067 G 1067
Score = 72 (30.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 24/82 (29%), Positives = 34/82 (41%)
Query: 25 LLYIFNASLCYNKCI-YGYCKG----PPDYSCQCELGWTGVDCSV-----NCLCNNHSTC 74
+ Y N+ C N C +G C P C+C+ W G C + NC +H C
Sbjct: 205 IFYSINS--CPNNCSGHGKCTTSISVPSQVYCECDKYWKGEACDIPYCKANCGSPDHGYC 262
Query: 75 -VHGIGICDECHD-WTT-GDHC 93
+ G +C C+D W G C
Sbjct: 263 DLTGEKLC-VCNDSWQEIGPDC 283
Score = 54 (24.1 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 74 CVHGIGICDECHDWTTGDHCQYCR 97
CV+ +CD W GD CQ+C+
Sbjct: 75 CVNSTCLCDP--GWV-GDQCQHCQ 95
Score = 50 (22.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNC 66
C G C +C C+ GW G C +C
Sbjct: 70 CFSGRCVNS---TCLCDPGWVGDQCQ-HC 94
>MGI|MGI:99916 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005178 "integrin binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005608 "laminin-3 complex" evidence=ISO;IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IGI] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0014044 "Schwann cell development" evidence=IDA] [GO:0031175
"neuron projection development" evidence=IDA] [GO:0043256 "laminin
complex" evidence=IDA] [GO:0045202 "synapse" evidence=IDA]
[GO:0048677 "axon extension involved in regeneration" evidence=IMP]
[GO:0050808 "synapse organization" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0072249
"metanephric glomerular visceral epithelial cell development"
evidence=IMP] [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IMP] MGI:MGI:99916 GO:GO:0007411
GO:GO:0007528 GO:GO:0007601 GO:GO:0007155 GO:GO:0045202
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
EMBL:CH466560 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
eggNOG:NOG241384 HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301 CTD:3913
KO:K06243 OMA:QPYCIVS OrthoDB:EOG4KSPHW ChiTaRS:LAMB2 GO:GO:0048677
GO:GO:0072274 GO:GO:0072249 EMBL:U43541 EMBL:U42624 EMBL:BC026051
EMBL:X75928 IPI:IPI00119065 PIR:I48749 RefSeq:NP_032509.2
UniGene:Mm.425599 ProteinModelPortal:Q61292 SMR:Q61292
STRING:Q61292 PhosphoSite:Q61292 PaxDb:Q61292 PRIDE:Q61292
Ensembl:ENSMUST00000065014 GeneID:16779 KEGG:mmu:16779
InParanoid:Q8R0Y0 NextBio:290628 Bgee:Q61292 CleanEx:MM_LAMB2
Genevestigator:Q61292 GermOnline:ENSMUSG00000052911 Uniprot:Q61292
Length = 1799
Score = 193 (73.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 38/91 (41%), Positives = 53/91 (58%)
Query: 68 CNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLG 124
C++H V G+ G C C + G CQ CR G +G +A+ GC++C CNS G +V G
Sbjct: 426 CDSHDDPVLGLVSGQC-RCKEHVVGTRCQQCRDGFFGLSASDPRGCQRCQCNSRG-TVPG 483
Query: 125 V--CDSITGECICQDNTQGKNCERCLPGYYG 153
CDS +G C C+ G C+RCLPG++G
Sbjct: 484 SSPCDSSSGTCFCKRLVTGHGCDRCLPGHWG 514
Score = 192 (72.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 48/146 (32%), Positives = 69/146 (47%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG- 109
C+C G T C + S V G G+CD C T G HC++CR Y + T
Sbjct: 350 CECN-GHTH-SCHFDMAVYLASGNVSG-GVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRD 406
Query: 110 ---CRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYYG-DPTD 157
CR CDC+ G+ G CDS ++G+C C+++ G C++C G++G +D
Sbjct: 407 PAVCRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASD 466
Query: 158 GGTCYY-QCMARGMLTGPGPQGLGSG 182
C QC +RG + G P SG
Sbjct: 467 PRGCQRCQCNSRGTVPGSSPCDSSSG 492
Score = 182 (69.1 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 45/136 (33%), Positives = 62/136 (45%)
Query: 53 CELG-WTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG- 109
C+ G W +C C+CN + C G C C D+T G+HC+ C AG +G+ G
Sbjct: 865 CQRGQWGFPNCRP-CVCNGRADECDTHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGG 923
Query: 110 -CRKCDCNSHGNS---VLGVC--DSITGECICQ--DNTQGKNCERCLPGYYGDPTD-GGT 160
CR C C S C D + + +CQ + G CE C PG++GDP+ GG
Sbjct: 924 QCRPCPCPEGPGSQRHFATSCHRDGYSQQIVCQCREGYTGLRCEACAPGHFGDPSKPGGR 983
Query: 161 CYYQCMARGMLTGPGP 176
C C G + P
Sbjct: 984 CQL-CECSGNIDPMDP 998
Score = 175 (66.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 43/131 (32%), Positives = 58/131 (44%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
C G+ P +C+L +CS N + C G C C T G HC YC+
Sbjct: 969 CAPGHFGDPSKPGGRCQL----CECSGNIDPMDPDACDPHTGQCLRCLHNTEGPHCGYCK 1024
Query: 98 AGSYGNATTQEGCRKCDCNSHG-------NSVLGVCDSITGECICQDNTQGKNCERCLPG 150
G +G A Q C +C CN G ++ L CD TG+C C + QG NC+ C P
Sbjct: 1025 PGFHGQAARQS-CHRCTCNLLGTDPRRCPSTDLCHCDPSTGQCPCLPHVQGLNCDHCAPN 1083
Query: 151 YYGDPTDGGTC 161
++ T G C
Sbjct: 1084 FWNF-TSGRGC 1093
Score = 169 (64.5 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 39/112 (34%), Positives = 53/112 (47%)
Query: 52 QCELGWTGVDCS-----VNCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGS 100
QC G+ G+ S C CN+ T V G CD C TG C C G
Sbjct: 454 QCRDGFFGLSASDPRGCQRCQCNSRGT-VPGSSPCDSSSGTCFCKRLVTGHGCDRCLPGH 512
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G + GCR CDC+ G ++ CD TG+C C+ + G+ CE+ PGY+
Sbjct: 513 WGLSHDLLGCRPCDCDV-GGALDPQCDEATGQCRCRQHMIGRRCEQVQPGYF 563
Score = 167 (63.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 49/147 (33%), Positives = 63/147 (42%)
Query: 43 CK-GPPDYSCQ-CELGWTG---VDCSVNCLCNNHST----CVHGIGICDECHDWTTGDHC 93
CK G C C G+ G C C C+ C G C C G C
Sbjct: 805 CKPGVVGRRCDVCATGYYGFGPAGCQA-CQCSPDGALSALCEGTSGQCP-CRPGAFGLRC 862
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYY 152
+C+ G +G CR C CN + CD+ TG C+ C+D T G++CERC+ G++
Sbjct: 863 DHCQRGQWGFPN----CRPCVCNGRADE----CDTHTGACLGCRDYTGGEHCERCIAGFH 914
Query: 153 GDPT--DGGTCYYQCMARGMLTGPGPQ 177
GDP GG C C GPG Q
Sbjct: 915 GDPRLPYGGQCR-PCPCP---EGPGSQ 937
Score = 150 (57.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 46/143 (32%), Positives = 61/143 (42%)
Query: 41 GYCKGPPDY-------SC-QCELGWTGVD---CSVNCLCNNHSTCVHGIGICDECHDWTT 89
GYCK P + SC +C G D C LC+ C G C C
Sbjct: 1021 GYCK--PGFHGQAARQSCHRCTCNLLGTDPRRCPSTDLCH----CDPSTGQCP-CLPHVQ 1073
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCL 148
G +C +C A ++ N T+ GC+ C C H + G C+ TG+C C G+ C C
Sbjct: 1074 GLNCDHC-APNFWNFTSGRGCQPCAC--HPSRARGPTCNEFTGQCHCHAGFGGRTCSECQ 1130
Query: 149 PGYYGDPTDGGTCYY-QCMARGM 170
Y+GDP G C C RG+
Sbjct: 1131 ELYWGDP--GLQCRACDCDPRGI 1151
Score = 127 (49.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 36/97 (37%), Positives = 51/97 (52%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRAGSYGNAT---TQEG----CRKCDCNSHGNS------ 121
VHG IC H+ T G +C+ C+ Y + ++G CRKC+CN H +S
Sbjct: 309 VHGACICK--HN-TRGLNCEQCQ-DFYQDLPWHPAEDGHTHACRKCECNGHTHSCHFDMA 364
Query: 122 VLGVCDSITGE-CI-CQDNTQGKNCERCLPGYYGDPT 156
V +++G C CQ NT G++CE C P +Y DPT
Sbjct: 365 VYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPT 401
Score = 123 (48.4 bits), Expect = 0.00070, P = 0.00070
Identities = 31/100 (31%), Positives = 41/100 (41%)
Query: 58 TGVDCSVNCLCN----NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC 113
+G C C C+ TC G C CH G C C+ +G+ Q CR C
Sbjct: 1089 SGRGCQP-CACHPSRARGPTCNEFTGQC-HCHAGFGGRTCSECQELYWGDPGLQ--CRAC 1144
Query: 114 DCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
DC+ G C TG C C+ G C++C G+ G
Sbjct: 1145 DCDPRGIDK-PQCHRSTGHCSCRPGVSGVRCDQCARGFSG 1183
Score = 56 (24.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 12/31 (38%), Positives = 12/31 (38%)
Query: 316 CVCPPRRT-GPDCQEEICPNECHEFLNHGTC 345
C C P R GP C E CH TC
Sbjct: 1096 CACHPSRARGPTCNEFTGQCHCHAGFGGRTC 1126
Score = 51 (23.0 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 302 PDKCPENRTC----INNQCVCPPRRTGPDCQEEICPN 334
P +CP C QC C P G +C + PN
Sbjct: 1048 PRRCPSTDLCHCDPSTGQCPCLPHVQGLNC-DHCAPN 1083
Score = 37 (18.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 326 DCQEE-ICPNECHEFLNHGTCDLLLTGV 352
DC I +CH H +C ++GV
Sbjct: 1145 DCDPRGIDKPQCHRSTGHCSCRPGVSGV 1172
>UNIPROTKB|F1RKL7 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 Pfam:PF07546 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891
GO:GO:0048641 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
GO:GO:0014719 GO:GO:0014841 EMBL:AEMK01186990 EMBL:CU582932
EMBL:CU914445 Ensembl:ENSSSCT00000015571 OMA:EDCAKEC
ArrayExpress:F1RKL7 Uniprot:F1RKL7
Length = 305
Score = 187 (70.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 65/199 (32%), Positives = 86/199 (43%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSV-------------NCLCNNHSTCVHGIGI 80
C +KC++G C P +CQCE GW G +CS C C N + C G
Sbjct: 109 CADKCVHGRCIAPN--TCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNRALCNPITGA 166
Query: 81 CDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C C G C+ C G+YGN Q +C C + G CD +TGEC C
Sbjct: 167 C-HCAAGFRGWRCEERCEQGTYGNDCHQ----RCQCQN-G----ATCDHVTGECRCPPGY 216
Query: 140 QGKNCER-CLPGYYGDPTDGGTCYYQCMARGM---LTG--PGPQG-LGSGLAERNAWEGK 192
G CE C PG +G P C C G+ +TG P P G LG+ + + EG+
Sbjct: 217 TGAFCEDLCPPGKHG-PQCEQRC--PCQNGGVCHHVTGECPCPPGWLGT-VCGQPCPEGR 272
Query: 193 --DTPSRECLWIIGQSLDS 209
S+EC G + D+
Sbjct: 273 FGKNCSQECQCHNGGTCDA 291
Score = 160 (61.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 51/146 (34%), Positives = 63/146 (43%)
Query: 30 NASLCYNKCIYGYCK---GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N +LC N I G C G + C+ CE G G DC C C N +TC H G C C
Sbjct: 156 NRALC-NP-ITGACHCAAGFRGWRCEERCEQGTYGNDCHQRCQCQNGATCDHVTGEC-RC 212
Query: 85 HDWTTGDHCQ-YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG C+ C G +G Q +C C + G GVC +TGEC C G
Sbjct: 213 PPGYTGAFCEDLCPPGKHGPQCEQ----RCPCQN-G----GVCHHVTGECPCPPGWLGTV 263
Query: 144 C-ERCLPGYYGDPT-------DGGTC 161
C + C G +G +GGTC
Sbjct: 264 CGQPCPEGRFGKNCSQECQCHNGGTC 289
Score = 143 (55.4 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 39/119 (32%), Positives = 52/119 (43%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N + C + + G C+ PP Y+ C+ C G G C C C N C H G C C
Sbjct: 199 NGATCDH--VTGECRCPPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECP-C 255
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G C Q C G +G +QE C C++ G G CD+ TG+C C G+
Sbjct: 256 PPGWLGTVCGQPCPEGRFGKNCSQE----CQCHN-G----GTCDAATGQCHCSPGYTGE 305
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 36/120 (30%), Positives = 47/120 (39%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ-YCRAGSYGNATTQE-G 109
+CE G G DC C C N +TC H G C C TG C+ C G +G Q
Sbjct: 181 RCEQGTYGNDCHQRCQCQNGATCDHVTGEC-RCPPGYTGAFCEDLCPPGKHGPQCEQRCP 239
Query: 110 CRKCDCNSH--GNSVL--GVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
C+ H G G ++ G+ C + GKNC + + G D T C
Sbjct: 240 CQNGGVCHHVTGECPCPPGWLGTVCGQP-CPEGRFGKNCSQECQCHNGGTCDAATGQCHC 298
>MGI|MGI:105382 [details] [associations]
symbol:Lama5 "laminin, alpha 5" species:10090 "Mus musculus"
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IMP] [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005178 "integrin
binding" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
[GO:0005604 "basement membrane" evidence=ISO;IDA] [GO:0005605
"basal lamina" evidence=IDA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=ISO] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
[GO:0016477 "cell migration" evidence=ISO] [GO:0030155 "regulation
of cell adhesion" evidence=IEA] [GO:0030324 "lung development"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043259 "laminin-10 complex"
evidence=ISO;IPI] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IMP] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:105382 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0005178 PROSITE:PS01186 GO:GO:0007229 GO:GO:0042475
EMBL:AL663027 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738 GO:GO:0034446
GO:GO:0090002 GO:GO:0016331 GO:GO:0001658 GO:GO:0060445
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OMA:LRHTTGP OrthoDB:EOG4VHK5G ChiTaRS:LAMA5 GO:GO:0043259
EMBL:AJ293593 EMBL:U37501 IPI:IPI00116913 PIR:T10053
RefSeq:NP_001074640.1 UniGene:Mm.4339 PDB:2Y38 PDBsum:2Y38
ProteinModelPortal:Q61001 SMR:Q61001 STRING:Q61001
PhosphoSite:Q61001 PaxDb:Q61001 PRIDE:Q61001
Ensembl:ENSMUST00000015791 GeneID:16776 KEGG:mmu:16776
InParanoid:A2ABW7 EvolutionaryTrace:Q61001 NextBio:290620
Bgee:Q61001 CleanEx:MM_LAMA5 Genevestigator:Q61001
GermOnline:ENSMUSG00000015647 Uniprot:Q61001
Length = 3718
Score = 204 (76.9 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 49/144 (34%), Positives = 63/144 (43%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNN-HSTCVHGIGICDECHDWTTGDHCQY 95
+C G+ P C+ DCS N N S C G C C TTG HC+
Sbjct: 1952 RCAPGFFGNPLVLGSSCQ----PCDCSGNGDPNMIFSDCDPLTGACRGCLRHTTGPHCER 2007
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C G YGNA C +CDC+ G CD +G C+C+ G+ C+RCL GY+G
Sbjct: 2008 CAPGFYGNALLPGNCTRCDCSPCGTET---CDPQSGRCLCKAGVTGQRCDRCLEGYFG-- 2062
Query: 156 TDGGTCYYQCMA-RGMLTGPGPQG 178
+ QC R GP +G
Sbjct: 2063 ------FEQCQGCRPCACGPAAKG 2080
Score = 174 (66.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 51/154 (33%), Positives = 67/154 (43%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQ-CELGW----TGVDCS--VNCLCNNHST-CVHGIGIC 81
N LC C Y +G SCQ C G+ G+ V C C+ HS C+ G GIC
Sbjct: 1828 NVELCM--CPANY-RGD---SCQECAPGYYRDTKGLFLGRCVPCQCHGHSDRCLPGSGIC 1881
Query: 82 DECHDWTTGDHCQYCRAG--SYGNATTQEGCRKCDCNSH--GNSVLGVCDSITG--ECIC 135
C T GD C+ CR G S + C C C N+ C G +C+C
Sbjct: 1882 VGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSCPCPLAVPSNNFADGCVLRNGRTQCLC 1941
Query: 136 QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
+ G +CERC PG++G+P G+ C G
Sbjct: 1942 RPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSG 1975
Score = 171 (65.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 43/131 (32%), Positives = 62/131 (47%)
Query: 41 GYCKGPPDYS---C-QCELGWTGV-DCSVNCLCNNHSTCVH--GIG-ICDECHDWTTGDH 92
G C+ P + C +C G+ G DC C C+ G+G +C C TG
Sbjct: 609 GRCQCRPGFDGPHCDRCLPGYHGYPDCHA-CACDPRGALDQQCGVGGLC-HCRPGYTGAT 666
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
CQ C G YG + C C C++ G S+ CD TG+C C+ G +C+ C+PG Y
Sbjct: 667 CQECSPGFYGFPS----CIPCHCSADG-SLHTTCDPTTGQCRCRPRVTGLHCDMCVPGAY 721
Query: 153 GDP-TDGGTCY 162
P + G+C+
Sbjct: 722 NFPYCEAGSCH 732
Score = 166 (63.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 40/129 (31%), Positives = 58/129 (44%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHCQYCRAGSY 101
C+ P + C +G +CS + TC G C C G C C G Y
Sbjct: 1517 CQ-PQSFGCHPLVGCEECNCSGPGVQELTDPTCDMDSGQC-RCRPNVAGRRCDTCAPGFY 1574
Query: 102 GNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGT 160
G + CR CDC+ G ++ VCD +TG+C C++N QG C++C G + D +
Sbjct: 1575 GYPS----CRPCDCHEAG-TMASVCDPLTGQCHCKENVQGSRCDQCRVGTFSLDAANPKG 1629
Query: 161 CYYQCMARG 169
C +C G
Sbjct: 1630 CT-RCFCFG 1637
Score = 163 (62.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 47/152 (30%), Positives = 65/152 (42%)
Query: 22 TVLLLYIFNASL---CYNK-CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCN-----NHS 72
T L L+ N +L C+ + C+ P C C G DCS C N
Sbjct: 1430 TSLSLFYNNGALPCGCHEVGAVSPTCE-PFGGQCPCRGHVIGRDCS-RCATGYWGFPNCR 1487
Query: 73 TCVHGIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG-- 124
C G +CDE C T C C+ S+G GC +C+C+ G L
Sbjct: 1488 PCDCGARLCDELTGQCICPPRTVPPDCLVCQPQSFG-CHPLVGCEECNCSGPGVQELTDP 1546
Query: 125 VCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
CD +G+C C+ N G+ C+ C PG+YG P+
Sbjct: 1547 TCDMDSGQCRCRPNVAGRRCDTCAPGFYGYPS 1578
Score = 157 (60.3 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 44/149 (29%), Positives = 62/149 (41%)
Query: 37 KC-IYGYCKGPPDYS---CQ-CELGWTGVDCSVNCLCNN----HSTCVHGIGICDECHDW 87
+C + G C P Y+ CQ C G+ G + C C+ H+TC G C C
Sbjct: 649 QCGVGGLCHCRPGYTGATCQECSPGFYGFPSCIPCHCSADGSLHTTCDPTTGQC-RCRPR 707
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCER 146
TG HC C G+Y + G C+ G + C+C+ + +G +C+R
Sbjct: 708 VTGLHCDMCVPGAYNFPYCEAG----SCHPAGLAPANPALPETQAPCMCRAHVEGPSCDR 763
Query: 147 CLPGYYGDPTDG--GTCYYQCMARGMLTG 173
C PGY+G G C RG L G
Sbjct: 764 CKPGYWGLSASNPEGCTRCSCDPRGTLGG 792
Score = 154 (59.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 35/98 (35%), Positives = 44/98 (44%)
Query: 70 NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ-----EGCRKCDCNSHGNSVLG 124
N G G+C +C TTG +C+ C G + A Q CR CDC S G
Sbjct: 387 NQDNVYQGGGVCLDCQHHTTGINCERCLPGFF-RAPDQPLDSPHVCRPCDCESDFTD--G 443
Query: 125 VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY 162
C+ +TG C C+ N G+ C C GY TD CY
Sbjct: 444 TCEDLTGRCYCRPNFTGELCAACAEGY----TDFPHCY 477
Score = 153 (58.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 44/114 (38%), Positives = 49/114 (42%)
Query: 58 TGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNS 117
T DCS C TC G C C TG C C G +G Q GCR C C
Sbjct: 2023 TRCDCSP---CGTE-TCDPQSGRC-LCKAGVTGQRCDRCLEGYFGFEQCQ-GCRPCAC-- 2074
Query: 118 HGNSVLGV-CDSITGECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCMARG 169
G + G C +G+C CQ T G C C PGY+G P G C QC RG
Sbjct: 2075 -GPAAKGSECHPQSGQCHCQPGTTGPQCLECAPGYWGLPEKGCRRC--QC-PRG 2124
Score = 135 (52.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 32/98 (32%), Positives = 46/98 (46%)
Query: 64 VNCLCNNHST----CVHG--IGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNS 117
VNC CN T C +G C C G HC+ C G +G + C C C+S
Sbjct: 498 VNCDCNAAGTQGNACRKDPRLGRC-VCKPNFRGAHCELCAPGFHGPS-----CHPCQCSS 551
Query: 118 HGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
G + +CD +G+C+C+ +G C+ C GY+ P
Sbjct: 552 PGVAN-SLCDPESGQCMCRTGFEGDRCDHCALGYFHFP 588
Score = 135 (52.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 33/97 (34%), Positives = 47/97 (48%)
Query: 84 CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGV--CDSITGECICQDNTQ 140
C G C C+ G +G +A+ EGC +C C+ G ++ GV C G+C C+ +
Sbjct: 752 CRAHVEGPSCDRCKPGYWGLSASNPEGCTRCSCDPRG-TLGGVTECQG-NGQCFCKAHVC 809
Query: 141 GKNCERCLPGYYG-DPTDGGTCYY-QCMARGMLTGPG 175
GK C C G++G D D C +C G L G G
Sbjct: 810 GKTCAACKDGFFGLDYADYFGCRSCRCDVGGAL-GQG 845
Score = 132 (51.5 bits), Expect = 0.00016, P = 0.00016
Identities = 37/113 (32%), Positives = 46/113 (40%)
Query: 43 CK-GPPDYSC-QCELGWTGVD-CSV--NCLCN---NHSTCVHGIGICDECHDWTTGDHCQ 94
CK G C +C G+ G + C C C S C G C C TTG C
Sbjct: 2044 CKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGSECHPQSGQC-HCQPGTTGPQCL 2102
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
C G +G ++GCR+C C G CD TG C C G+ C+ C
Sbjct: 2103 ECAPGYWG--LPEKGCRRCQCPR------GHCDPHTGHCTCPPGLSGERCDTC 2147
Score = 131 (51.2 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 43/145 (29%), Positives = 58/145 (40%)
Query: 32 SLCYNKCIYGYCK-GPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGI---GICDECHD 86
SLC + C+ G C C LG+ C C+ T G G C +C
Sbjct: 557 SLCDPESGQCMCRTGFEGDRCDHCALGYFHFPLCQLCGCSPAGTLPEGCDEAGRC-QCRP 615
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
G HC C G +G C C C+ G ++ C + G C C+ G C+
Sbjct: 616 GFDGPHCDRCLPGYHG----YPDCHACACDPRG-ALDQQC-GVGGLCHCRPGYTGATCQE 669
Query: 147 CLPGYYGDPTDGGTCYYQCMARGML 171
C PG+YG P+ C+ C A G L
Sbjct: 670 CSPGFYGFPSCI-PCH--CSADGSL 691
Score = 129 (50.5 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 38/123 (30%), Positives = 52/123 (42%)
Query: 42 YCKGPPDYSC-QCELGWTGVDCS-----VNCLCNNHSTC-----VHGIGICDECHDWTTG 90
+ +GP SC +C+ G+ G+ S C C+ T G G C C G
Sbjct: 755 HVEGP---SCDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQGNGQCF-CKAHVCG 810
Query: 91 DHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
C C+ G +G + GCR C C+ G G C+ TG C C+ NTQG C
Sbjct: 811 KTCAACKDGFFGLDYADYFGCRSCRCDVGGALGQG-CEPKTGACRCRPNTQGPTCSEPAK 869
Query: 150 GYY 152
+Y
Sbjct: 870 DHY 872
Score = 125 (49.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 39/131 (29%), Positives = 59/131 (45%)
Query: 51 CQCELGWTGVDC---SVNCLCNNHSTCVHGIGICDECHD-WTTGDHCQYCRAGSYGNATT 106
C CE +T C + C C + T G +C C + +T HC + + +
Sbjct: 434 CDCESDFTDGTCEDLTGRCYCRPNFT---G-ELCAACAEGYTDFPHCYPLPSFPHNDTRE 489
Query: 107 Q---EG-CRKCDCNSHGNSVLGVC--DSITGECICQDNTQGKNCERCLPGYYGDPTDGGT 160
Q G CDCN+ G C D G C+C+ N +G +CE C PG++G P+
Sbjct: 490 QVLPAGQIVNCDCNAAGTQG-NACRKDPRLGRCVCKPNFRGAHCELCAPGFHG-PS---- 543
Query: 161 CY-YQCMARGM 170
C+ QC + G+
Sbjct: 544 CHPCQCSSPGV 554
Score = 105 (42.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 34/109 (31%), Positives = 47/109 (43%)
Query: 64 VNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG--CRKCDCNSHG-- 119
+ C C H+TC G G CD C C + ATT C+ C+C+ H
Sbjct: 325 LQCACQ-HNTC--G-GSCDRC--------CPGFNQQPWKPATTDSANECQSCNCHGHAYD 372
Query: 120 ---------NSVLGVCDSIT---GECI-CQDNTQGKNCERCLPGYYGDP 155
+ D++ G C+ CQ +T G NCERCLPG++ P
Sbjct: 373 CYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAP 421
Score = 86 (35.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 26/79 (32%), Positives = 34/79 (43%)
Query: 300 SC-PDKCPENRTC--INNQCVCPPRRTGPDCQEEIC-PNE--CHEFLNHGTCDLLLTGVH 353
+C P C R C + QC+CPPR PDC +C P CH + C+ GV
Sbjct: 1485 NCRPCDCGA-RLCDELTGQCICPPRTVPPDCL--VCQPQSFGCHPLVGCEECNCSGPGVQ 1541
Query: 354 ITHGRTLHYQVDLIRCTCR 372
T +D +C CR
Sbjct: 1542 ELTDPTC--DMDSGQCRCR 1558
Score = 55 (24.4 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 17/46 (36%), Positives = 20/46 (43%)
Query: 290 EGFNATYQIFSC-PDKC-P--ENRTCI--NNQCVCPPRRTGPDCQE 329
EG+ Q C P C P + C + QC C P TGP C E
Sbjct: 2058 EGYFGFEQCQGCRPCACGPAAKGSECHPQSGQCHCQPGTTGPQCLE 2103
Score = 52 (23.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 22/66 (33%), Positives = 27/66 (40%)
Query: 289 SEGFNATYQIFSC-PDKCPEN----RTC--INNQCVCPPRRTGPDCQEEICPNECHEF-- 339
S GF Y SC P C + TC QC C PR TG C ++C + F
Sbjct: 671 SPGF---YGFPSCIPCHCSADGSLHTTCDPTTGQCRCRPRVTGLHC--DMCVPGAYNFPY 725
Query: 340 LNHGTC 345
G+C
Sbjct: 726 CEAGSC 731
Score = 50 (22.7 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVH 353
C C P T P+ +E +C + CD L G H
Sbjct: 593 CGCSPAGTLPEGCDEAGRCQCRPGFDGPHCDRCLPGYH 630
Score = 50 (22.7 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 20/76 (26%), Positives = 30/76 (39%)
Query: 300 SCPDKCPENRTC-INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGR 358
+C + ++ C + C C P TG CQE C + F + C H +
Sbjct: 639 ACDPRGALDQQCGVGGLCHCRPGYTGATCQE--CSPGFYGFPSCIPC-------HCSADG 689
Query: 359 TLHYQVDLI--RCTCR 372
+LH D +C CR
Sbjct: 690 SLHTTCDPTTGQCRCR 705
Score = 46 (21.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 316 CVCPPRRTGPDCQE 329
C+CP G CQE
Sbjct: 1832 CMCPANYRGDSCQE 1845
Score = 46 (21.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 301 CPDKCPENRT---CI----NNQCVCPPRRTGPDCQ 328
CP P N C+ QC+C P G C+
Sbjct: 1917 CPLAVPSNNFADGCVLRNGRTQCLCRPGYAGASCE 1951
Score = 45 (20.9 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 304 KCPENRTCI--NNQCVCPPRRTGPDCQEEICPNECHE 338
+CP C C CPP +G C + C + H+
Sbjct: 2120 QCPRGH-CDPHTGHCTCPPGLSGERC--DTCSQQ-HQ 2152
Score = 44 (20.5 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 316 CVCPPRRTGPDCQEEICPNECH 337
C C P G +C + +CH
Sbjct: 2072 CACGPAAKGSECHPQ--SGQCH 2091
Score = 44 (20.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 7/14 (50%), Positives = 7/14 (50%)
Query: 316 CVCPPRRTGPDCQE 329
C C P GP C E
Sbjct: 853 CRCRPNTQGPTCSE 866
Score = 44 (20.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 315 QCVCPPRRTGPDCQEEICPNECH 337
+CVC P G C E+C H
Sbjct: 520 RCVCKPNFRGAHC--ELCAPGFH 540
Score = 40 (19.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 164 QCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQ 223
QC RG + G +G D +R C + GQ + T P D ++ + Q
Sbjct: 1461 QCPCRGHVIGRDCSRCATGYWGFPNCRPCDCGARLCDELTGQCICPPRTVPPDCLVCQPQ 1520
Score = 39 (18.8 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 304 KCPENRTCINNQC-VCPPRRTG-PDCQEEICPNECHEFLNHGT-CDLLLTG 351
+C N +C C P G P C+ P +CHE + CD L TG
Sbjct: 1556 RCRPN--VAGRRCDTCAPGFYGYPSCR----PCDCHEAGTMASVCDPL-TG 1599
Score = 39 (18.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 302 PDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLN-HG-TCD 346
P+ C E +C C P GP C C H + + H CD
Sbjct: 602 PEGCDEA-----GRCQCRPGFDGPHCDR--CLPGYHGYPDCHACACD 641
>UNIPROTKB|P21783 [details] [associations]
symbol:notch1 "Neurogenic locus notch protein homolog"
species:8355 "Xenopus laevis" [GO:0005654 "nucleoplasm"
evidence=TAS] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0016021 GO:GO:0007399
GO:GO:0005654 GO:GO:0030154 GO:GO:0006355 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
Pfam:PF12661 SUPFAM:SSF90193 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4851 EMBL:M33874 PIR:A35844
RefSeq:NP_001081074.1 UniGene:Xl.1057 ProteinModelPortal:P21783
SMR:P21783 GeneID:394367 KEGG:xla:394367 Xenbase:XB-GENE-865261
Uniprot:P21783
Length = 2524
Score = 165 (63.1 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 44/131 (33%), Positives = 59/131 (45%)
Query: 36 NKCIYGYCK-GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
N CI+G C G Y C CE GW+G +C +N + C++G G C + TG +
Sbjct: 722 NPCIHGACHDGVNGYKCDCEAGWSGSNCDINNNECESNPCMNG-GTCKDM----TGAYIC 776
Query: 95 YCRAGSYG-NATTQ-EGCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCLPGY 151
C+AG G N T C C +HG + D + G +C C G CE L
Sbjct: 777 TCKAGFSGPNCQTNINECSSNPCLNHGTCI----DDVAGYKCNCMLPYTGAICEAVLAPC 832
Query: 152 YGDPT-DGGTC 161
G P +GG C
Sbjct: 833 AGSPCKNGGRC 843
Score = 134 (52.2 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 46/151 (30%), Positives = 65/151 (43%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
N C G C D Y C CE G+TG C++N + + C +G G C D G C
Sbjct: 647 NLCDNGKCIDKIDGYECTCEPGYTGKLCNININECDSNPCRNG-GTCK---DQINGFTC- 701
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYY 152
C G + + E +CNS+ + G C D + G +C C+ G NC+
Sbjct: 702 VCPDGYHDHMCLSE---VNECNSNP-CIHGACHDGVNGYKCDCEAGWSGSNCDINNNECE 757
Query: 153 GDPT-DGGTCY-----YQCMARGMLTGPGPQ 177
+P +GGTC Y C + +GP Q
Sbjct: 758 SNPCMNGGTCKDMTGAYICTCKAGFSGPNCQ 788
Score = 128 (50.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 45/154 (29%), Positives = 65/154 (42%)
Query: 36 NKCIYGYCKGPPD-------YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGIC-DECHDW 87
N+C CK + Y+C C+ G++G+ C N S+C +G G C D + +
Sbjct: 946 NECASNPCKNGANCTDCVNSYTCTCQPGFSGIHCESNTPDCTESSCFNG-GTCIDGINTF 1004
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCE 145
T CQ C G G+ Q +CD N G C DS T +C C G NC+
Sbjct: 1005 T----CQ-CPPGFTGSYC-QHDINECDSKPCLNG--GTCQDSYGTYKCTCPQGYTGLNCQ 1056
Query: 146 RCLPGYYGDPT-DGGTC-----YYQCMARGMLTG 173
+ P +GG C +Y+C + TG
Sbjct: 1057 NLVRWCDSSPCKNGGKCWQTNNFYRCECKSGWTG 1090
Score = 125 (49.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 85/339 (25%), Positives = 116/339 (34%)
Query: 36 NKCIYG-YCKGPPD-YSCQCELGWTGVDCSVN---CL---CNNHSTCVHGI-GICDECHD 86
N C+ G CK Y C C+ G++G +C N C C NH TC+ + G C
Sbjct: 759 NPCMNGGTCKDMTGAYICTCKAGFSGPNCQTNINECSSNPCLNHGTCIDDVAGYKCNCML 818
Query: 87 WTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
TG C+ A G+ G C++ + D T C C QG+ CE
Sbjct: 819 PYTGAICEAVLAPCAGSPCKNGGRCKESE------------DFETFSCECPPGWQGQTCE 866
Query: 146 RCLPGYYGDPT-DGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSREC 199
+ P +G TC Y+C + PG G + + C
Sbjct: 867 IDMNECVNRPCRNGATCQNTNGSYKCNCK-----PGYTGRNCEMDIDDCQPNPCHNGGSC 921
Query: 200 LWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGV 259
I PA + + DIN C N D V S T Q G+
Sbjct: 922 SDGINMFF---CNCPAGFRGPKCEEDIN-ECASNPCKNGANCTDCVNSYTCTCQPGFSGI 977
Query: 260 FC---TEDMHRG--YEVLEAKSGVMTIHYKQGKPSEGFNATY---QIFSCPDK-CPENRT 310
C T D + G+ T Q P GF +Y I C K C T
Sbjct: 978 HCESNTPDCTESSCFNGGTCIDGINTFTC-QCPP--GFTGSYCQHDINECDSKPCLNGGT 1034
Query: 311 CINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C ++ +C CP TG +CQ + + N G C
Sbjct: 1035 CQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKC 1073
Score = 123 (48.4 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 37/117 (31%), Positives = 54/117 (46%)
Query: 48 DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+Y C+C GWTG C C ++ C +G G +C + C+ C G +G AT +
Sbjct: 125 EYKCRCPPGWTGDSCQQADPCASNP-CANG-G---KCLPFEIQYICK-CPPGFHG-ATCK 177
Query: 108 EGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNC-ERCLPGYYGDPTDGGTC 161
+ +C N N G C + G C CQ+ G+NC E +P +GGTC
Sbjct: 178 QDINECSQNPCKNG--GQCINEFGSYRCTCQNRFTGRNCDEPYVPCNPSPCLNGGTC 232
Score = 119 (46.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 46/164 (28%), Positives = 63/164 (38%)
Query: 12 TAKDDALS-RCTVLLLY---IFNASL--CYNK-CIYG-YCKGPPDY---SCQCELGWTGV 60
T DD +C +L Y I A L C C G CK D+ SC+C GW G
Sbjct: 804 TCIDDVAGYKCNCMLPYTGAICEAVLAPCAGSPCKNGGRCKESEDFETFSCECPPGWQGQ 863
Query: 61 DCSVN---CL---CNNHSTC--VHGIGICDECHDWTTGDHCQY----CRAGSYGNA-TTQ 107
C ++ C+ C N +TC +G C+ C TG +C+ C+ N +
Sbjct: 864 TCEIDMNECVNRPCRNGATCQNTNGSYKCN-CKPGYTGRNCEMDIDDCQPNPCHNGGSCS 922
Query: 108 EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
+G CN C+ EC G NC C+ Y
Sbjct: 923 DGINMFFCNCPAGFRGPKCEEDINECASNPCKNGANCTDCVNSY 966
Score = 118 (46.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 38/122 (31%), Positives = 49/122 (40%)
Query: 49 YSCQCELGWTGVDC---SVNCLCNNHSTCVHGIGICDE---CHDWTTGDHCQYCRAGSYG 102
Y C+C+ GWTGV C SV+C V + +C C D T H C+AG Y
Sbjct: 1080 YRCECKSGWTGVYCDVPSVSCEVAAKQQGVDIVHLCRNSGMCVD-TGNTHFCRCQAG-YT 1137
Query: 103 NATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT-DGG 159
+ +E +C N N C G C C G NC + P +GG
Sbjct: 1138 GSYCEEQVDECSPNPCQNGA--TCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGG 1195
Query: 160 TC 161
TC
Sbjct: 1196 TC 1197
Score = 116 (45.9 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 55/190 (28%), Positives = 69/190 (36%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-CNNHSTCVHGIGICDECHDWT 88
N C+N YG Y+C C GWTG DCS N C N + C G CHD
Sbjct: 307 NGGTCHNT--YG------GYNCVCVNGWTGEDCSENIDDCAN-AACHSGA----TCHDRV 353
Query: 89 TGDHCQYCRAGSYGNAT-TQEGCRKCDCNSHGNSVLGVCDS--ITGE--CICQDNTQGKN 143
+C+ C G G C CN N CD+ + G+ C C G
Sbjct: 354 ASFYCE-CPHGRTGLLCHLDNACISNPCNEGSN-----CDTNPVNGKAICTCPPGYTGPA 407
Query: 144 C----ERCLPGYYGDPTD-GGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE 198
C + C G +P + GG C G PQG E + E P +
Sbjct: 408 CNNDVDECSLG--ANPCEHGGRC---TNTLGSFQCNCPQGYAGPRCEIDVNECLSNPCQN 462
Query: 199 ---CLWIIGQ 205
CL IG+
Sbjct: 463 DSTCLDQIGE 472
Score = 111 (44.1 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 44/145 (30%), Positives = 64/145 (44%)
Query: 33 LCYNKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
LC N G C + + C+C+ G+TG C + + C +G C D+ G
Sbjct: 1114 LCRNS---GMCVDTGNTHFCRCQAGYTGSYCEEQVDECSPNPCQNGA----TCTDYLGGY 1166
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCE---- 145
C+ C AG +G ++E +C SH G C D I T +C C TQG +CE
Sbjct: 1167 SCE-CVAGYHGVNCSEE---INECLSHPCQNGGTCIDLINTYKCSCPRGTQGVHCEINVD 1222
Query: 146 RCLPGYYGDPTDGGTCYY--QCMAR 168
C P +Y T C+ +C+ R
Sbjct: 1223 DCTP-FYDSFTLEPKCFNNGKCIDR 1246
Score = 110 (43.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 47/165 (28%), Positives = 63/165 (38%)
Query: 29 FNASLC---YNKCIYGYCK-------GPPDYSCQCELGWTGVDCS--VN-CLCNNHSTCV 75
F+ +LC +++C CK GP Y+CQC G+TG C +N C+ + C
Sbjct: 519 FSGNLCQHDFDECTSTPCKNGAKCLDGPNSYTCQCTEGFTGRHCEQDINECIPD---PCH 575
Query: 76 HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITGE-C 133
+G C D C CR G G + +C N G C D G C
Sbjct: 576 YGT-----CKDGIATFTC-LCRPGYTGRLCDND-INECLSKPCLNG--GQCTDRENGYIC 626
Query: 134 ICQDNTQGKNCERCLPGYYGDPTDGGTCY-----YQCMARGMLTG 173
C T G NCE + + D G C Y+C TG
Sbjct: 627 TCPKGTTGVNCETKIDDCASNLCDNGKCIDKIDGYECTCEPGYTG 671
Score = 107 (42.7 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 38/136 (27%), Positives = 60/136 (44%)
Query: 48 DYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGIC-DECHDWTTGDHCQYCRAGSYGNAT 105
++ C C G+ G+ C N C ++ C+H G C D+ +++ C C G GN
Sbjct: 472 EFQCICMPGYEGLYCETNIDECASNP-CLHN-GKCIDKINEF----RCD-CPTGFSGNLC 524
Query: 106 TQE--GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER----CLPG--YYGDPTD 157
+ C C + G L +S T C C + G++CE+ C+P +YG D
Sbjct: 525 QHDFDECTSTPCKN-GAKCLDGPNSYT--CQCTEGFTGRHCEQDINECIPDPCHYGTCKD 581
Query: 158 GGTCYYQCMARGMLTG 173
G + C+ R TG
Sbjct: 582 G-IATFTCLCRPGYTG 596
Score = 106 (42.4 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 39/129 (30%), Positives = 53/129 (41%)
Query: 36 NKCIYG-YC-KGPPDYSCQCELGWTGVDCSVN---C-----LCNNHSTCVHGIG--ICDE 83
N C G C G Y+CQC WTG C+ + C C N TC + G C
Sbjct: 263 NNCRNGGTCVDGVNTYNCQCPPDWTGQYCTEDVDECQLMPNACQNGGTCHNTYGGYNCVC 322
Query: 84 CHDWTTGDHCQY----C-RAGSYGNATTQEGCRK--CDCNSHGNSVLGVCDSITGECICQ 136
+ WT G+ C C A + AT + C+C HG + L +C + CI
Sbjct: 323 VNGWT-GEDCSENIDDCANAACHSGATCHDRVASFYCEC-PHGRTGL-LCH-LDNACISN 378
Query: 137 DNTQGKNCE 145
+G NC+
Sbjct: 379 PCNEGSNCD 387
Score = 106 (42.4 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 46/165 (27%), Positives = 66/165 (40%)
Query: 29 FNASLC---YNKCIYGYCKGPPD-------YSCQCELGWTGVDCSVNCLCNNHSTCVHGI 78
F+ + C N+C CK Y C C+ +TG +C + N S C++G
Sbjct: 171 FHGATCKQDINECSQNPCKNGGQCINEFGSYRCTCQNRFTGRNCDEPYVPCNPSPCLNG- 229
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQ 136
G C + D T+ D C C G G +E C N+ N G C D + T C C
Sbjct: 230 GTCRQTDD-TSYD-CT-CLPGFSGQ-NCEENIDDCPSNNCRNG--GTCVDGVNTYNCQCP 283
Query: 137 DNTQGKNCERCLPGYYGDPT---DGGTCY-----YQCMARGMLTG 173
+ G+ C + P +GGTC+ Y C+ TG
Sbjct: 284 PDWTGQYCTEDVDECQLMPNACQNGGTCHNTYGGYNCVCVNGWTG 328
Score = 99 (39.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/122 (27%), Positives = 47/122 (38%)
Query: 49 YSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICD-ECHDWTTGDHCQYCRAGSYGNA 104
Y C C G GV C +N C S + + +C D G +C C G G
Sbjct: 1204 YKCSCPRGTQGVHCEINVDDCTPFYDSFTLEPKCFNNGKCIDRVGGYNC-ICPPGFVGER 1262
Query: 105 TTQE--GCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERCLPGYYGDPT-DGG 159
+ C C+S G C + + C C+ G+ CE + G G P +GG
Sbjct: 1263 CEGDVNECLSNPCDSRGTQN---CIQLVNDYRCECRQGFTGRRCESVVDGCKGMPCRNGG 1319
Query: 160 TC 161
TC
Sbjct: 1320 TC 1321
Score = 95 (38.5 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 41/153 (26%), Positives = 66/153 (43%)
Query: 36 NKCI-YGYCK----GPP-DYSCQCELGWTGVDC--SVNCLCNNHSTCVHGIGICDECHDW 87
N+C+ +G C+ G D+ C C +G+T C V+ C N+ C +G G C+ +
Sbjct: 66 NQCMNFGTCEPVLQGNAIDFICHCPVGFTDKVCLTPVDNACVNNP-CRNG-GTCELLNS- 122
Query: 88 TTGDHCQYCRAGSYGNATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
T C+ C G G++ Q + C C ++G L I C C G C++
Sbjct: 123 VTEYKCR-CPPGWTGDSCQQADPCASNPC-ANGGKCLPF--EIQYICKCPPGFHGATCKQ 178
Query: 147 CLPGYYGDPT-DGGTCY-----YQCMARGMLTG 173
+ +P +GG C Y+C + TG
Sbjct: 179 DINECSQNPCKNGGQCINEFGSYRCTCQNRFTG 211
Score = 90 (36.7 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 24/65 (36%), Positives = 29/65 (44%)
Query: 291 GFNATYQIFSCP-DKCPENRTCINN----QCVCPPRRTGPDCQEEI--C---PNECHEFL 340
G N I CP + C TC++ C CPP TG C E++ C PN C
Sbjct: 250 GQNCEENIDDCPSNNCRNGGTCVDGVNTYNCQCPPDWTGQYCTEDVDECQLMPNACQ--- 306
Query: 341 NHGTC 345
N GTC
Sbjct: 307 NGGTC 311
Score = 89 (36.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 30/93 (32%), Positives = 43/93 (46%)
Query: 291 GFNATY---QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFL 340
G+ +Y Q+ C P+ C TC + C C G +C EEI NEC H
Sbjct: 1135 GYTGSYCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEI--NECLSHPCQ 1192
Query: 341 NHGTC-DLLLT-GVHITHG-RTLHYQVDLIRCT 370
N GTC DL+ T G + +H ++++ CT
Sbjct: 1193 NGGTCIDLINTYKCSCPRGTQGVHCEINVDDCT 1225
Score = 82 (33.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 21/62 (33%), Positives = 28/62 (45%)
Query: 290 EGFNATYQIFSCPD-KCPENRTCIN----NQCVCPPRRTGPDCQEE-ICPNECHEFLNHG 343
+G Y +C + +C TCI+ ++CVC TG CQ I P H N G
Sbjct: 1340 DGATCEYDSRTCSNLRCQNGGTCISVLTSSKCVCSEGYTGATCQYPVISPCASHPCYNGG 1399
Query: 344 TC 345
TC
Sbjct: 1400 TC 1401
Score = 79 (32.9 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 30/95 (31%), Positives = 37/95 (38%)
Query: 277 GVMTIHYKQGKPSEGFNATYQIFSC---PDKCPENRTCINN----QCVCPPRRTGPDCQE 329
GV T + + G T + C P+ C TC N CVC TG DC E
Sbjct: 274 GVNTYNCQCPPDWTGQYCTEDVDECQLMPNACQNGGTCHNTYGGYNCVCVNGWTGEDCSE 333
Query: 330 EI--CPNE-CHEFLNHGTCDLLLTGVHIT--HGRT 359
I C N CH + TC + + HGRT
Sbjct: 334 NIDDCANAACH---SGATCHDRVASFYCECPHGRT 365
Score = 78 (32.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 27/83 (32%), Positives = 37/83 (44%)
Query: 296 YQIFSCPDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTG 351
Y F+ KC N CI+ C+CPP G C+ ++ NEC L++ CD
Sbjct: 1228 YDSFTLEPKCFNNGKCIDRVGGYNCICPPGFVGERCEGDV--NEC---LSN-PCD----- 1276
Query: 352 VHITHGRTLHYQ-VDLIRCTCRQ 373
+ G Q V+ RC CRQ
Sbjct: 1277 ---SRGTQNCIQLVNDYRCECRQ 1296
Score = 78 (32.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 32/95 (33%), Positives = 40/95 (42%)
Query: 291 GFNATYQIFSCPD----KCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHE--FL 340
GF+ + + PD C TCI+ C CPP TG CQ +I NEC L
Sbjct: 973 GFSGIHCESNTPDCTESSCFNGGTCIDGINTFTCQCPPGFTGSYCQHDI--NECDSKPCL 1030
Query: 341 NHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVY 375
N GTC ++G Y +CTC Q Y
Sbjct: 1031 NGGTCQ-------DSYGT---Y-----KCTCPQGY 1050
Score = 78 (32.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 23/71 (32%), Positives = 30/71 (42%)
Query: 287 KPSEGFNATYQIFSCPDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFL 340
K + G N +I C +N CI+ +C C P TG C I NEC +
Sbjct: 630 KGTTGVNCETKIDDCASNLCDNGKCIDKIDGYECTCEPGYTGKLCNINI--NECDSNPCR 687
Query: 341 NHGTCDLLLTG 351
N GTC + G
Sbjct: 688 NGGTCKDQING 698
Score = 70 (29.7 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 22/77 (28%), Positives = 30/77 (38%)
Query: 305 CPENRTC----INNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGR 358
C E C +N + C CPP TGP C ++ +EC L C+ HG
Sbjct: 380 CNEGSNCDTNPVNGKAICTCPPGYTGPACNNDV--DECS--LGANPCE---------HGG 426
Query: 359 TLHYQVDLIRCTCRQVY 375
+ +C C Q Y
Sbjct: 427 RCTNTLGSFQCNCPQGY 443
Score = 57 (25.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 316 CVCPPRRTGPDCQEE--ICPN-ECHEFLNHGTCDLLLT 350
C CPP G C+ + C N C N GTC +LT
Sbjct: 1333 CKCPPGFDGATCEYDSRTCSNLRCQ---NGGTCISVLT 1367
Score = 56 (24.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 24/86 (27%), Positives = 32/86 (37%)
Query: 273 EAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQ----CVCPPRRTGPDCQ 328
E KSG ++ S A Q C + C++ C C TG C+
Sbjct: 1083 ECKSGWTGVYCDVPSVSCEVAAKQQGVDIVHLCRNSGMCVDTGNTHFCRCQAGYTGSYCE 1142
Query: 329 EEI--C-PNECHEFLNHGTCDLLLTG 351
E++ C PN C N TC L G
Sbjct: 1143 EQVDECSPNPCQ---NGATCTDYLGG 1165
Score = 53 (23.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTGVHI 354
+C C +G +C +I NEC +N GTC + TG +I
Sbjct: 737 KCDCEAGWSGSNC--DINNNECESNPCMNGGTCKDM-TGAYI 775
Score = 41 (19.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 308 NRTCINNQCV-----CPPRRTGP--DCQEEICPNECHEFLNHGTCD 346
N C N+ C C P +C + + +C ++ N G CD
Sbjct: 1462 NANCNNHACGWDGGDCSLNFNDPWKNCTQSL---QCWKYFNDGKCD 1504
>UNIPROTKB|F1NLU4 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IEA] GO:GO:0050873
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED EMBL:AADN02044975 IPI:IPI00592759
Ensembl:ENSGALT00000002051 Uniprot:F1NLU4
Length = 1165
Score = 196 (74.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 61 DCSVNCLCNNHSTCVH----------GI--GICDECHDWTTGDHCQYCRAGSYGNA---- 104
+C + C CN HS H G+ G+CD+C T G++C+ C+ + N
Sbjct: 310 ECQL-CNCNGHSASCHFDPEVFHSSGGVSGGVCDDCQHNTEGNNCERCKTNYFRNQRQDL 368
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
T E C+ C+C+ G VCD ++G C+C++N QG+ C C PG+
Sbjct: 369 THPEACQPCECDPDGTVPGSVCDPLSGHCVCKENVQGERCHLCKPGF 415
Score = 141 (54.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 34/103 (33%), Positives = 45/103 (43%)
Query: 66 CLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGSYGNATTQE-GCRKCDCNSH 118
C C+ T V G +CD C + G+ C C+ G A GCR+C CN
Sbjct: 377 CECDPDGT-VPG-SVCDPLSGHCVCKENVQGERCHLCKPGFAQLAHANPLGCRRCACNVL 434
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G CD TG C C N G +C++C G++ D G C
Sbjct: 435 GTRQNVPCDDETGSCSCLPNVVGTDCDQCAAGHW-DMASGRGC 476
Score = 139 (54.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 40/124 (32%), Positives = 55/124 (44%)
Query: 41 GYCKGPPDY---SC-QCELG-W---TGVDCSVNCLCN---NHST-CVHGIGICDECHDWT 88
G C P+ C QC G W +G C C CN +HS C G C +C +
Sbjct: 447 GSCSCLPNVVGTDCDQCAAGHWDMASGRGCRP-CECNPSGSHSIHCNQFTGQC-QCREGF 504
Query: 89 TGDHC-----QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG C Q C +G+ GC +C+C+ G +G CD TG C+C+ G
Sbjct: 505 TGRTCSAAQQQVCPDRHFGDVRV--GCTECNCDFQGTEDVG-CDKSTGHCLCRPGVTGPR 561
Query: 144 CERC 147
C++C
Sbjct: 562 CDQC 565
Score = 47 (21.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 316 CVCPPRRTGPDCQEEICPNE-CHEFLNHGTC 345
C+C P TGP C + C + C + + C
Sbjct: 551 CLCRPGVTGPRCDQ--CQRDHCSTYPSCEPC 579
Score = 40 (19.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 15/60 (25%), Positives = 20/60 (33%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTGVHITHGRTLHYQVDLIRCTCRQ 373
C C P G DC ++ G C+ +G H H Q C CR+
Sbjct: 449 CSCLPNVVGTDC-DQCAAGHWDMASGRGCRPCECNPSGSHSIHCNQFTGQ-----CQCRE 502
>MGI|MGI:96743 [details] [associations]
symbol:Lamb1 "laminin B1" species:10090 "Mus musculus"
[GO:0005178 "integrin binding" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=IDA]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005607
"laminin-2 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IDA] [GO:0007566
"embryo implantation" evidence=IMP] [GO:0007611 "learning or
memory" evidence=NAS] [GO:0016477 "cell migration" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0031175 "neuron projection
development" evidence=ISO;IDA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=ISO] [GO:0042476
"odontogenesis" evidence=ISO] [GO:0043208 "glycosphingolipid
binding" evidence=IDA] [GO:0043256 "laminin complex" evidence=IDA]
[GO:0043257 "laminin-8 complex" evidence=ISO] [GO:0043259
"laminin-10 complex" evidence=ISO;IPI] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:96743 GO:GO:0048471
GO:GO:0016477 GO:GO:0007155 PROSITE:PS00022 GO:GO:0007611
Reactome:REACT_127416 GO:GO:0005178 PROSITE:PS01186 GO:GO:0007162
GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0031175 GO:GO:0042476
GO:GO:0007566 InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384
OrthoDB:EOG44BB1B GO:GO:0005607 GO:GO:0043257
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 ChiTaRS:LAMB1 EMBL:M15525 EMBL:CR974423
EMBL:CT571245 EMBL:X05212 IPI:IPI00988644 PIR:A26413
UniGene:Mm.172674 PDB:4AQS PDBsum:4AQS ProteinModelPortal:P02469
SMR:P02469 MINT:MINT-1206337 STRING:P02469 PhosphoSite:P02469
PaxDb:P02469 PRIDE:P02469 Ensembl:ENSMUST00000169088
InParanoid:P02469 Bgee:P02469 CleanEx:MM_LAMB1-1
Genevestigator:P02469 GermOnline:ENSMUSG00000002900 Uniprot:P02469
Length = 1786
Score = 206 (77.6 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 49/138 (35%), Positives = 62/138 (44%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
S C + C G+ P D+ C+ C N + C G C +C T GD
Sbjct: 953 SRC-DDCASGFFGNPSDFGGSCQ----PCQCHHNIDTTDPEACDKETGRCLKCLYHTEGD 1007
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCN------SHGNSVLGVCDSITGECICQDNTQGKNCE 145
HCQ C+ G YG+A Q+ CRKC CN H N CD TG+C C N G+NC+
Sbjct: 1008 HCQLCQYGYYGDALRQD-CRKCVCNYLGTVKEHCNGSDCHCDKATGQCSCLPNVIGQNCD 1066
Query: 146 RCLPGYY--GDPTDGGTC 161
RC P + T G C
Sbjct: 1067 RCAPNTWQLASGTGCGPC 1084
Score = 197 (74.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 46/132 (34%), Positives = 63/132 (47%)
Query: 49 YSCQCEL---GWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNA 104
Y+ QC+ G+ G C CN H+ C G C C D+TTG +C+ C AG YG+
Sbjct: 847 YARQCDRCLPGYWGFPSCQPCQCNGHALDCDTVTGECLSCQDYTTGHNCERCLAGYYGDP 906
Query: 105 TTQEG--CRKCDCNS---HGNSVLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGDP 155
G CR C C G C D +T + C+C G C+ C G++G+P
Sbjct: 907 IIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGFFGNP 966
Query: 156 TD-GGTCY-YQC 165
+D GG+C QC
Sbjct: 967 SDFGGSCQPCQC 978
Score = 183 (69.5 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 37/108 (34%), Positives = 53/108 (49%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+S + TG+ C + + S C G C +C G C C G++G
Sbjct: 760 FSISALIHQTGLACECDPQGSLSSVCDPNGGQC-QCRPNVVGRTCNRCAPGTFGFGPN-- 816
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
GC+ CDC+ G S CD+ITG+C C + C+RCLPGY+G P+
Sbjct: 817 GCKPCDCHLQG-SASAFCDAITGQCHCFQGIYARQCDRCLPGYWGFPS 863
Score = 178 (67.7 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 48/131 (36%), Positives = 56/131 (42%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECH---------DWTTGDHCQYC 96
P CQC G C+ C +G CD CH D TG C +C
Sbjct: 787 PNGGQCQCRPNVVGRTCN-RCAPGTFGFGPNGCKPCD-CHLQGSASAFCDAITGQ-C-HC 842
Query: 97 RAGSYGNATTQ--------EGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERC 147
G Y + C+ C CN H CD++TGEC+ CQD T G NCERC
Sbjct: 843 FQGIYARQCDRCLPGYWGFPSCQPCQCNGHALD----CDTVTGECLSCQDYTTGHNCERC 898
Query: 148 LPGYYGDPTDG 158
L GYYGDP G
Sbjct: 899 LAGYYGDPIIG 909
Score = 165 (63.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 47/150 (31%), Positives = 66/150 (44%)
Query: 30 NASLCYNKCIYGYCKGPPDY---SC-QCELG-W---TGVDCSVNCLCNN-HS---TCVHG 77
N S C+ G C P+ +C +C W +G C C CN HS +C
Sbjct: 1041 NGSDCHCDKATGQCSCLPNVIGQNCDRCAPNTWQLASGTGCGP-CNCNAAHSFGPSCNEF 1099
Query: 78 IGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C +C G C C+ +G+ + CR CDC+ G CD TG+C+C +
Sbjct: 1100 TGQC-QCMPGFGGRTCSECQELFWGDPDVE--CRACDCDPRGIET-PQCDQSTGQCVCVE 1155
Query: 138 NTQGKNCERCLPGYYGDPTDGGTCYYQCMA 167
+G C++C GY G D C+ QC A
Sbjct: 1156 GVEGPRCDKCTRGYSGVFPDCTPCH-QCFA 1184
Score = 150 (57.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 67 LCNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVL 123
+C+ ++ G+ G C C G+ C C+ G Y +A GC+ C CN G
Sbjct: 410 ICDGYTDFSVGLIAGQC-RCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPG 468
Query: 124 G-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G CDS TG C C+ G+ C++CLP ++G D C
Sbjct: 469 GNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGC 507
Score = 138 (53.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/117 (29%), Positives = 48/117 (41%)
Query: 65 NCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
+C CN T + G CD C TG C C +G + +GCR CDC+
Sbjct: 457 SCACNPLGT-IPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDL- 514
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPG 175
G ++ C +G+C C + G+ C GYY D +Y A GPG
Sbjct: 515 GGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYYFTTLD----HYIYEAEEANLGPG 567
Score = 45 (20.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 308 NRTCINN--QCVCPPRRTGPDCQE 329
N +C + QC C P G C E
Sbjct: 519 NNSCSEDSGQCSCLPHMIGRQCNE 542
Score = 41 (19.5 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 315 QCVCPPRRTGPDCQEEICPN 334
QC C P G +C + PN
Sbjct: 1053 QCSCLPNVIGQNC-DRCAPN 1071
Score = 41 (19.5 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQE 329
C ++ + CVC P G C +
Sbjct: 933 CYQDPVTLQLACVCDPGYIGSRCDD 957
Score = 40 (19.1 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 301 CPDKCPENRTCINN--QCVCPPRRTGPDCQE 329
C + E C + QCVC GP C +
Sbjct: 1134 CDPRGIETPQCDQSTGQCVCVEGVEGPRCDK 1164
Score = 39 (18.8 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 13/39 (33%), Positives = 14/39 (35%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTG 351
QC C P G C C F +G CD L G
Sbjct: 791 QCQCRPNVVGRTCNR--CAPGTFGFGPNGCKPCDCHLQG 827
Score = 38 (18.4 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 315 QCVCPPR---RTGPDCQE 329
QC C P RT +CQE
Sbjct: 1102 QCQCMPGFGGRTCSECQE 1119
>MGI|MGI:2159341 [details] [associations]
symbol:Ntng2 "netrin G2" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 MGI:MGI:2159341 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186 EMBL:CH466542
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
eggNOG:NOG286598 HOVERGEN:HBG052676 CTD:84628 HOGENOM:HOG000231614
KO:K16359 OrthoDB:EOG47D9FR EMBL:AB052336 EMBL:AB052337
EMBL:AB052338 EMBL:AF475079 EMBL:AF475080 EMBL:AL772379
IPI:IPI00311068 IPI:IPI00311069 IPI:IPI00625609 RefSeq:NP_598007.1
RefSeq:NP_598008.1 UniGene:Mm.442448 ProteinModelPortal:Q8R4F1
SMR:Q8R4F1 STRING:Q8R4F1 PRIDE:Q8R4F1 Ensembl:ENSMUST00000048455
Ensembl:ENSMUST00000091153 Ensembl:ENSMUST00000102873 GeneID:171171
KEGG:mmu:171171 InParanoid:A2AKX0 OMA:QPRCDPA ChiTaRS:NTNG2
NextBio:370580 Bgee:Q8R4F1 CleanEx:MM_NTNG2 Genevestigator:Q8R4F1
GermOnline:ENSMUSG00000035513 Uniprot:Q8R4F1
Length = 589
Score = 160 (61.4 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 36/97 (37%), Positives = 49/97 (50%)
Query: 65 NCLCNNHST-CVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EG-CRKCDC 115
+C C HS C + + C C T G HCQ+CR G Y N + + E C +C+C
Sbjct: 412 DCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNC 471
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
N G SV C+ TG C C++ G C+ CLP +Y
Sbjct: 472 NQIG-SVHDRCNE-TGFCECREGAVGPKCDDCLPTHY 506
Score = 71 (30.1 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 305 CPENRTCINNQ-CVCPPRRTGPDCQEEIC 332
C TC NQ C CPP TG C++ C
Sbjct: 523 CQNGGTCQQNQRCACPPGYTGIRCEQPRC 551
Score = 45 (20.9 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 51 CQCELGWTGVDCSVNCLCN 69
C+CE TG DC C N
Sbjct: 305 CECEHNTTGPDCG-RCKKN 322
>UNIPROTKB|F1PHK9 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043259 "laminin-10 complex" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] GO:GO:0016477 GO:GO:0006461
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AAEX03005149 EMBL:AAEX03005150 Ensembl:ENSCAFT00000020993
Uniprot:F1PHK9
Length = 1487
Score = 196 (74.1 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 50/131 (38%), Positives = 61/131 (46%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDW 87
+ C C+ GY + P LG C V C CN HS TC G+CD C D
Sbjct: 574 YGGQFC-EMCLSGYRRETPS------LGPYS-PC-VLCTCNGHSETCDPETGVCD-CRDN 623
Query: 88 TTGDHCQYCRAGSYGNATT--QEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNC 144
T G HC+ C G YG++TT C+ C C G+S V + C C T GK C
Sbjct: 624 TAGPHCEKCSDGYYGDSTTGSSSDCQPCPCPG-GSSCAVVPKTQEVVCTNCPTGTTGKRC 682
Query: 145 ERCLPGYYGDP 155
E C GY+GDP
Sbjct: 683 ELCDDGYFGDP 693
Score = 179 (68.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 37/94 (39%), Positives = 52/94 (55%)
Query: 62 CSVNCLCN---NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
CS C C+ + ST G C C G+ C C+ G Y ++ T+ GCR C CN
Sbjct: 273 CSP-CHCSPVGSLSTQCDSYGRCS-CKPGVMGEKCDRCQPG-Y-HSLTEAGCRPCSCNPA 328
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
G+ + C+ TG C+C+DN +G NCERC PG++
Sbjct: 329 GS--IDECNVETGRCVCKDNVEGFNCERCKPGFF 360
Score = 174 (66.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 46/132 (34%), Positives = 58/132 (43%)
Query: 37 KCIYG----YCKGPPDYSCQCELGWTGVDCSVNCLCNNHST------CVHGIGICDECHD 86
KCIY YC D L D C CN + T C G C EC
Sbjct: 729 KCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACACNPYGTVKQQSSCNPVTGQC-ECLP 787
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
TG C C G Y N + +GC +CDC++ G S G CD TG+C CQ G++CE
Sbjct: 788 HVTGRDCGACDPGFY-NLQSGQGCERCDCHALG-STNGQCDIRTGQCECQPGITGQHCEH 845
Query: 147 CLPGYYGDPTDG 158
C ++G +G
Sbjct: 846 CEVNHFGFGPEG 857
Score = 172 (65.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 61 DCSVNCLCNNHSTCV-----HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG----CR 111
DC C C S+C + +C C TTG C+ C G +G+ + G CR
Sbjct: 647 DCQP-CPCPGGSSCAVVPKTQEV-VCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCR 704
Query: 112 KCDCNSHGN-SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
C CN + + + +G C+ +TGEC+ C NT G C+RC G++G+P
Sbjct: 705 LCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNP 750
Score = 160 (61.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 35/85 (41%), Positives = 42/85 (49%)
Query: 90 GDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C+ C +G Y T G C C CN H + CD TG C C+DNT G +CE
Sbjct: 576 GQFCEMCLSG-YRRETPSLGPYSPCVLCTCNGHSET----CDPETGVCDCRDNTAGPHCE 630
Query: 146 RCLPGYYGDPTDGGTCYYQ-CMARG 169
+C GYYGD T G + Q C G
Sbjct: 631 KCSDGYYGDSTTGSSSDCQPCPCPG 655
Score = 160 (61.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 36/116 (31%), Positives = 51/116 (43%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNSH 118
C+ N N C G C +C T G +C C+ G +GN + CR C CN +
Sbjct: 708 CNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACACNPY 767
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
G C+ +TG+C C + G++C C PG+Y + G C A G G
Sbjct: 768 GTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG 823
Score = 158 (60.7 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 36/112 (32%), Positives = 50/112 (44%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
G C P Y+ Q G DC + L + + C G C EC TG HC++C
Sbjct: 795 GACD-PGFYNLQSGQGCERCDC--HALGSTNGQCDIRTGQC-ECQPGITGQHCEHCEVNH 850
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G EGC+ CDC+ G+ L D G C C+ G C++C Y+
Sbjct: 851 FGFGP--EGCKPCDCHPEGSVSLQCKDD--GRCECKQGFVGNRCDQCEENYF 898
Score = 152 (58.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 33/96 (34%), Positives = 45/96 (46%)
Query: 76 HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECIC 135
HG G C C T G +C+ CR + + E C C C+ G S+ CDS G C C
Sbjct: 241 HG-GHCTNCQGNTDGANCERCRENFF-RLVSHEACSPCHCSPVG-SLSTQCDSY-GRCSC 296
Query: 136 QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGML 171
+ G+ C+RC PGY+ T+ G C G +
Sbjct: 297 KPGVMGEKCDRCQPGYHS-LTEAGCRPCSCNPAGSI 331
Score = 49 (22.3 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 312 INNQCVCPPRRTGPDC 327
+ QC C P TG DC
Sbjct: 779 VTGQCECLPHVTGRDC 794
Score = 44 (20.5 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 19/64 (29%), Positives = 25/64 (39%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTGVHITHGRTLHYQVDLIRCTCR 372
QC C P TG C+ C F G CD H +L + D RC C+
Sbjct: 831 QCECQPGITGQHCEH--CEVNHFGFGPEGCKPCDC-----HPEGSVSLQCKDDG-RCECK 882
Query: 373 QVYL 376
Q ++
Sbjct: 883 QGFV 886
Score = 37 (18.1 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 310 TCINNQCVCPPRRTGPDCQEEICPNECHE 338
TC + C P DC++ C +
Sbjct: 603 TCNGHSETCDPETGVCDCRDNTAGPHCEK 631
>ZFIN|ZDB-GENE-980526-114 [details] [associations]
symbol:dlb "deltaB" species:7955 "Danio rerio"
[GO:0007154 "cell communication" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0021536
"diencephalon development" evidence=IGI;IMP] [GO:0030901 "midbrain
development" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001774
InterPro:IPR001881 InterPro:IPR011651 InterPro:IPR018097
Pfam:PF00008 Pfam:PF01414 Pfam:PF07657 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 ZFIN:ZDB-GENE-980526-114
GO:GO:0016021 GO:GO:0030154 GO:GO:0007219 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030901 PROSITE:PS01186
PROSITE:PS00010 HOGENOM:HOG000267024 HOVERGEN:HBG007139 KO:K06051
EMBL:AF006488 EMBL:BC076414 IPI:IPI00497041 RefSeq:NP_571033.1
UniGene:Dr.574 ProteinModelPortal:O57409 SMR:O57409 STRING:O57409
Ensembl:ENSDART00000019259 GeneID:30141 KEGG:dre:30141 CTD:30141
eggNOG:NOG298562 InParanoid:O57409 OMA:NHKPCAN OrthoDB:EOG4PZJ68
NextBio:20806616 ArrayExpress:O57409 Bgee:O57409 GO:GO:0021536
Uniprot:O57409
Length = 615
Score = 182 (69.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 42/131 (32%), Positives = 59/131 (45%)
Query: 35 YNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC 93
Y C++G C P + C C+ GW G+ C+ + C NH C +G C + G +
Sbjct: 242 YPGCLHGTCSQP--WQCVCKEGWGGLFCNQDLNYCTNHKPCANGA----TCTNTGQGSYT 295
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERCLPGY 151
CR G +G + +CDCN N G C+ + + C C GKNCE
Sbjct: 296 CTCRPG-FGGTNCELEINECDCNPCKNG--GSCNDLENDYSCTCPQGFYGKNCEIIAMTC 352
Query: 152 YGDPT-DGGTC 161
DP +GGTC
Sbjct: 353 ADDPCFNGGTC 363
Score = 128 (50.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 33 LCYNKCI--YGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTG 90
+C + C +GYC+ P + C+C LGW G CS C ++ C+HG C + W
Sbjct: 207 ICSSDCSERHGYCESPGE--CKCRLGWQGPSCSE---CVHYPGCLHGT--CSQ--PW--- 254
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE----CICQDNTQGKNCER 146
C C+ G +G + C +H G + TG+ C C+ G NCE
Sbjct: 255 -QC-VCKEG-WGGLFCNQDLNYC--TNHKPCANGATCTNTGQGSYTCTCRPGFGGTNCEL 309
Query: 147 CLPGYYGDPT-DGGTC 161
+ +P +GG+C
Sbjct: 310 EINECDCNPCKNGGSC 325
Score = 54 (24.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 291 GFNATYQIFSCPDK-CPENRTCIN----NQCVCPPRRTGPDCQEEICPNECHEF--LNHG 343
G N ++ C K C C++ C C P +G C+ I ++C + N G
Sbjct: 381 GSNCEKRLDRCSHKPCANGGECVDLGASALCRCRPGFSGSRCETNI--DDCARYPCQNAG 438
Query: 344 TC 345
TC
Sbjct: 439 TC 440
Score = 48 (22.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 305 CPENRTC---INNQ-CVCPPRRTGPDC--QEEIC-PNECHEFLNHGTC 345
C TC IN+ C C TG +C + + C N C L+ GTC
Sbjct: 434 CQNAGTCQDGINDYTCTCTLGFTGKNCSLRADACLTNPC---LHGGTC 478
>UNIPROTKB|G3N1H6 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:DAAA02032274 EMBL:DAAA02032272 EMBL:DAAA02032273
Ensembl:ENSBTAT00000064483 Uniprot:G3N1H6
Length = 595
Score = 161 (61.7 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 36/97 (37%), Positives = 49/97 (50%)
Query: 65 NCLCNNHST-CVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EG-CRKCDC 115
+C C HS C + + C C T G HCQ+CR G Y N + + E C +C+C
Sbjct: 417 DCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNC 476
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
N G SV C+ TG C C++ G C+ CLP +Y
Sbjct: 477 NQIG-SVHDRCNE-TGFCECREGAAGPKCDDCLPTHY 511
Score = 70 (29.7 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 305 CPENRTCINNQ-CVCPPRRTGPDCQEEIC 332
C TC+ NQ C CP TG C++ C
Sbjct: 528 CQNGGTCVQNQRCACPRGYTGARCEQPRC 556
Score = 44 (20.5 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 51 CQCELGWTGVDC 62
C+CE TG DC
Sbjct: 305 CECEHNTTGPDC 316
>UNIPROTKB|F1LPI5 [details] [associations]
symbol:Lamb3 "Protein Lamb3" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0050873 "brown fat cell differentiation" evidence=IEA]
RGD:1562668 GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED IPI:IPI00363443 UniGene:Rn.49634
ProteinModelPortal:F1LPI5 Ensembl:ENSRNOT00000008440 NextBio:654049
ArrayExpress:F1LPI5 Uniprot:F1LPI5
Length = 1171
Score = 192 (72.6 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 35 YNKCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
YN + +G + CQ C+ C + S G G+CD C D T G +C
Sbjct: 297 YNNRPWRPAEGQDIHECQRCDCNGHSETCHFDPAVFAASQGTSG-GVCDNCQDHTEGKNC 355
Query: 94 QYCRAGSYGN----ATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCL 148
+ C+ + N A E C C+C+ G +V G CD +TG+C+C+D+ QG+ C+ C
Sbjct: 356 ERCQLHYFRNRRPGAPIHETCIPCECDPDG-AVPGAPCDRLTGQCVCKDHVQGERCDLCK 414
Query: 149 PGYYG 153
PG+ G
Sbjct: 415 PGFTG 419
Score = 142 (55.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 32/108 (29%), Positives = 44/108 (40%)
Query: 74 CVHGIGICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
C G C C D G+ C C+ G G +GC CDC+ G C+ TG
Sbjct: 392 CDRLTGQC-VCKDHVQGERCDLCKPGFTGLTFANPQGCHPCDCSILGTRQDMPCEEETGR 450
Query: 133 CICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLG 180
C+C N G C++C P ++ + G C R L+ Q G
Sbjct: 451 CLCLPNVVGPKCDQCAPSHWKLASGRGCEPCACDPRNSLSSQCNQFTG 498
Score = 131 (51.2 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 46/161 (28%), Positives = 63/161 (39%)
Query: 8 SGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDY---SC-QCELG-W---TG 59
+GLT A C +L C + G C P+ C QC W +G
Sbjct: 418 TGLTFANPQGCHPCDCSILGTRQDMPCEEET--GRCLCLPNVVGPKCDQCAPSHWKLASG 475
Query: 60 VDCSVNCLCNNH----STCVHGIGICDECHDWTTGDHC-----QYCRAGSYGNATTQEGC 110
C C C+ S C G C C + G C + C ++G+ T GC
Sbjct: 476 RGCEP-CACDPRNSLSSQCNQFTGQCP-CREGFGGLTCSSAAIRQCPDRTHGDVAT--GC 531
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
R CDC+ G G CD +G C+C+ G C++C GY
Sbjct: 532 RACDCDFRGTEGPG-CDKTSGRCLCRPGLTGPRCDQCQRGY 571
Score = 130 (50.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 36/110 (32%), Positives = 50/110 (45%)
Query: 72 STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ--EG-----CRKCDCNSHGNS--- 121
+T V +C C T G +C C A Y N + EG C++CDCN H +
Sbjct: 270 TTAVQVNDVC-VCQHNTAGPNCDRC-APFYNNRPWRPAEGQDIHECQRCDCNGHSETCHF 327
Query: 122 ---VLGVCDSITGE-CI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
V +G C CQD+T+GKNCERC Y+ + G + C+
Sbjct: 328 DPAVFAASQGTSGGVCDNCQDHTEGKNCERCQLHYFRNRRPGAPIHETCI 377
Score = 50 (22.7 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 301 CPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
C + E C + +C+C P TGP C +
Sbjct: 536 CDFRGTEGPGCDKTSGRCLCRPGLTGPRCDQ 566
Score = 44 (20.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 315 QCVCPPRRTGPDCQE 329
+C+C P GP C +
Sbjct: 450 RCLCLPNVVGPKCDQ 464
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/48 (29%), Positives = 17/48 (35%)
Query: 306 PENRTCINNQCVCPPRRT--GPDCQEEICPNECHEFLNHGTCDLLLTG 351
P + TCI C C P G C C + + CDL G
Sbjct: 371 PIHETCI--PCECDPDGAVPGAPCDRLTGQCVCKDHVQGERCDLCKPG 416
>UNIPROTKB|F1MC13 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090002 "establishment of protein localization to
plasma membrane" evidence=IEA] [GO:0060445 "branching involved in
salivary gland morphogenesis" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005178 "integrin binding" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0045995 "regulation
of embryonic development" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 EMBL:DAAA02036259 EMBL:DAAA02036256
EMBL:DAAA02036257 EMBL:DAAA02036258 IPI:IPI00717460
Ensembl:ENSBTAT00000003981 Uniprot:F1MC13
Length = 3656
Score = 180 (68.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 40/118 (33%), Positives = 52/118 (44%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNN-HSTCVHGIGICDECHDWTTGDHCQY 95
+C G+ P C+ DCS N N S C G C C TTG C+
Sbjct: 1911 RCAPGFFGNPLVLGSSCQ----PCDCSGNGDPNMLFSDCDPLTGTCRGCLRHTTGPRCES 1966
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C G YGNA C +CDC+ G CD +G C+C+ G C+RC G++G
Sbjct: 1967 CAPGFYGNALLPGNCTRCDCSPCGTEA---CDPHSGHCLCKAGVTGLRCDRCQEGHFG 2021
Score = 178 (67.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 38/113 (33%), Positives = 54/113 (47%)
Query: 64 VNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSY--GNATTQEGCRKCDCNSH-- 118
+ C C+ HS C+ G G+C C T GDHC+ C+AG G+ C C C
Sbjct: 1822 IPCQCHGHSDRCLPGSGVCIGCQHNTEGDHCERCQAGFVRTGSEDPAAPCISCPCPLAVP 1881
Query: 119 GNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
N+ C G +C+C+ G +CERC PG++G+P G+ C G
Sbjct: 1882 SNNFATGCILRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSG 1934
Score = 167 (63.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 38/120 (31%), Positives = 52/120 (43%)
Query: 47 PDYSCQCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT 105
P SC C L + + C+ T C+ C G C+ C G +GN
Sbjct: 1870 PCISCPCPLAVPSNNFATGCILRGGRTQCL--------CKPGYAGASCERCAPGFFGNPL 1921
Query: 106 TQ-EGCRKCDCNSHG--NSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTC 161
C+ CDC+ +G N + CD +TG C C +T G CE C PG+YG+ G C
Sbjct: 1922 VLGSSCQPCDCSGNGDPNMLFSDCDPLTGTCRGCLRHTTGPRCESCAPGFYGNALLPGNC 1981
Score = 166 (63.5 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 41/132 (31%), Positives = 62/132 (46%)
Query: 41 GYCKGPPDYS---C-QCELGWTGV-DCSVNCLCNNHST----CVHGIGICDECHDWTTGD 91
G C P+++ C +C LG+ G +C C C+ + C G G+C C + G
Sbjct: 586 GRCLCRPEFNGPHCDRCRLGYHGYPECHA-CACDPRGSVDQLCGAG-GLCRCCSGYA-GS 642
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
CQ C G +G C C C+ G S+ CD +G+C C+ G C+ C+PG
Sbjct: 643 TCQECSPGFHGFPD----CAPCHCSPEG-SLHAACDPHSGQCSCRPRVTGLRCDMCVPGA 697
Query: 152 YGDP-TDGGTCY 162
Y P + G+C+
Sbjct: 698 YNFPYCEAGSCH 709
Score = 163 (62.4 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 37/98 (37%), Positives = 48/98 (48%)
Query: 64 VNCLCNNHST----CVHG--IGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNS 117
VNC C+ T C +G C C G HC+ C G YG GC+ C C+S
Sbjct: 475 VNCDCSAAGTQGNACRKDPQVGHC-VCKPNFQGTHCELCAPGFYG-----PGCQPCQCSS 528
Query: 118 HGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
G V G CD +G+C C+ +G C+RC PGY+ P
Sbjct: 529 PG-VVDGTCDRDSGQCTCRTGFEGAACDRCAPGYFHFP 565
Score = 162 (62.1 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 42/131 (32%), Positives = 60/131 (45%)
Query: 43 CKGPPDYSCQCELGWTGVDCS---VNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAG 99
C+ P + C +G +CS V L + TC G C +C G C C G
Sbjct: 1477 CQ-PQTFGCHPLVGCEECNCSGPGVQELMD--PTCDADSGQC-KCRPNVAGRRCDTCAPG 1532
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDG 158
+G + CR CDC+ G S G CD +TG+C C++N QG C++C G + D +
Sbjct: 1533 FHGFPS----CRPCDCHEAG-SAPGTCDPLTGQCYCKENVQGPRCDQCRLGTFSLDAANP 1587
Query: 159 GTCYYQCMARG 169
C +C G
Sbjct: 1588 KGCT-RCFCFG 1597
Score = 161 (61.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 32/97 (32%), Positives = 45/97 (46%)
Query: 70 NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT----TQEGCRKCDCNSHGNSVLGV 125
N G G+C +C TTG +C+ C G Y + + CR+C+C S G
Sbjct: 364 NQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSPDHPLDSPHACRRCNCESDFTD--GT 421
Query: 126 CDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY 162
C+ +TG C C+ N G C+ C G+ TD CY
Sbjct: 422 CEDLTGRCYCRPNFTGARCDACAEGF----TDFPHCY 454
Score = 153 (58.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 47/152 (30%), Positives = 66/152 (43%)
Query: 43 CKGPPDYSCQ-CELGWTGV-DCSVNCLCNN----HSTCVHGIGICDECHDWTTGDHCQYC 96
C G +CQ C G+ G DC+ C C+ H+ C G C C TG C C
Sbjct: 636 CSGYAGSTCQECSPGFHGFPDCAP-CHCSPEGSLHAACDPHSGQCS-CRPRVTGLRCDMC 693
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE----CICQDNTQGKNCERCLPGYY 152
G+Y + G C+ G L D + E C C+ + +G +C+RC PG++
Sbjct: 694 VPGAYNFPYCEAG----SCHPAG---LAPADRVPPEAQAPCTCRAHVEGPSCDRCKPGFW 746
Query: 153 G-DPTDGGTCYY-QCMARGMLTGPGPQGLGSG 182
G P++ C C RG L G LG+G
Sbjct: 747 GLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNG 778
Score = 153 (58.9 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 45/134 (33%), Positives = 56/134 (41%)
Query: 58 TGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNS 117
T DCS C + H G C C TG C C+ G +G EGCR C C
Sbjct: 1982 TRCDCSP---CGTEACDPHS-GHC-LCKAGVTGLRCDRCQEGHFGFEGC-EGCRPCACGP 2035
Query: 118 HGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG----MLTG 173
S C +G+C C+ T G C C PG++G P G C +C +G + TG
Sbjct: 2036 AAES--SECHPQSGQCHCRPGTGGPQCRECAPGHWGLPEQG--CR-RCQCQGGHCDLHTG 2090
Query: 174 --PGPQGLGSGLAE 185
P GLG E
Sbjct: 2091 RCTCPPGLGGERCE 2104
Score = 150 (57.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 32/107 (29%), Positives = 50/107 (46%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCR 111
+C G+ G C C+ C G C C T C C+ ++G GC
Sbjct: 1435 RCATGYWGFPSCRPCDCSGR-LCDELTGQCI-CPPRTIPPDCLVCQPQTFG-CHPLVGCE 1491
Query: 112 KCDCNSHGNSVL--GVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
+C+C+ G L CD+ +G+C C+ N G+ C+ C PG++G P+
Sbjct: 1492 ECNCSGPGVQELMDPTCDADSGQCKCRPNVAGRRCDTCAPGFHGFPS 1538
Score = 138 (53.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 39/125 (31%), Positives = 50/125 (40%)
Query: 43 CK-GPPDYSC-QCE---LGWTGVDCSVNCLCN---NHSTCVHGIGICDECHDWTTGDHCQ 94
CK G C +C+ G+ G + C C S C G C C T G C+
Sbjct: 2003 CKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAAESSECHPQSGQC-HCRPGTGGPQCR 2061
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
C G +G ++GCR+C C G CD TG C C G+ CE C +
Sbjct: 2062 ECAPGHWG--LPEQGCRRCQCQG------GHCDLHTGRCTCPPGLGGERCETC-SHQHQV 2112
Query: 155 PTDGG 159
P GG
Sbjct: 2113 PVPGG 2117
Score = 135 (52.6 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 40/125 (32%), Positives = 55/125 (44%)
Query: 42 YCKGPPDYSC-QCELGWTGVDCS-----VNCLCNNHST------CVHGIGICDECHDWTT 89
+ +GP SC +C+ G+ G+ S C C+ T C G G C C
Sbjct: 732 HVEGP---SCDRCKPGFWGLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQCF-CKPHVC 787
Query: 90 GDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERC 147
G C C+ G +G + GCR C C+ G LG C+ TG C+C+ NTQG C
Sbjct: 788 GQTCAACKDGFFGLDQADYFGCRSCRCDVGG--ALGQSCELRTGACMCRPNTQGSTCSEP 845
Query: 148 LPGYY 152
+Y
Sbjct: 846 AQDHY 850
Score = 131 (51.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 39/128 (30%), Positives = 52/128 (40%)
Query: 50 SC-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDE-----CHDWTTGDHCQYCRAGSYGN 103
+C +C G+ C C+ T G CD+ C G HC CR G +G
Sbjct: 553 ACDRCAPGYFHFPLCQLCGCSPVGTLPEG---CDDAGRCLCRPEFNGPHCDRCRLGYHGY 609
Query: 104 ATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYY 163
C C C+ G SV +C + G C C G C+ C PG++G P D C+
Sbjct: 610 PE----CHACACDPRG-SVDQLCGA-GGLCRCCSGYAGSTCQECSPGFHGFP-DCAPCH- 661
Query: 164 QCMARGML 171
C G L
Sbjct: 662 -CSPEGSL 668
Score = 128 (50.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 84 CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQG 141
C G C C+ G +G + + EGC +C+C+ G C G+C C+ + G
Sbjct: 729 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQCFCKPHVCG 788
Query: 142 KNCERCLPGYYG-DPTDGGTCYYQC 165
+ C C G++G D D Y+ C
Sbjct: 789 QTCAACKDGFFGLDQAD----YFGC 809
Score = 112 (44.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 35/102 (34%), Positives = 46/102 (45%)
Query: 64 VNCLCNNHSTCVHGIGICDEC------HDW--TTGDHCQYCRA-GSYGNATTQEGCRKCD 114
+ C C H+TC G G CD C W T D C++ YG+A + D
Sbjct: 302 LQCACQ-HNTC--G-GSCDRCCPGFNQQPWRPATTDSANECQSCNCYGHAHDCYYDPEVD 357
Query: 115 CNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
+ + V G CI CQ +T G NCE+CLPG+Y P
Sbjct: 358 RRNASQNQDQVYQG-GGVCIDCQHHTTGINCEQCLPGFYRSP 398
Score = 108 (43.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 95 YCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+CR+ + + G R C C+ G ++ C+ G+C C+ + G++C RC GY+G
Sbjct: 1384 FCRSAATSLSLFYNNGARPCGCHEVG-AMSPTCEPFGGQCPCRAHVIGRDCSRCATGYWG 1442
Query: 154 DPT 156
P+
Sbjct: 1443 FPS 1445
Score = 89 (36.4 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 26/79 (32%), Positives = 33/79 (41%)
Query: 300 SC-PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNE---CHEFLNHGTCDLLLTGVH 353
SC P C R C + QC+CPPR PDC +C + CH + C+ GV
Sbjct: 1445 SCRPCDC-SGRLCDELTGQCICPPRTIPPDCL--VCQPQTFGCHPLVGCEECNCSGPGVQ 1501
Query: 354 ITHGRTLHYQVDLIRCTCR 372
T D +C CR
Sbjct: 1502 ELMDPTC--DADSGQCKCR 1518
Score = 89 (36.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 112 KCDCNSHGN--SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
+C C+ H + D +C CQ NT G +C+RC PG+ P
Sbjct: 281 RCVCHGHADVCDAKDPTDPFRLQCACQHNTCGGSCDRCCPGFNQQP 326
Score = 53 (23.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 20/51 (39%), Positives = 24/51 (47%)
Query: 304 KCPENRTCINNQC-VCPPRRTG-PDCQEEICPNECHEFLNH-GTCDLLLTG 351
KC N +C C P G P C+ P +CHE + GTCD L TG
Sbjct: 1516 KCRPN--VAGRRCDTCAPGFHGFPSCR----PCDCHEAGSAPGTCDPL-TG 1559
Score = 52 (23.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 19/70 (27%), Positives = 28/70 (40%)
Query: 264 DMHRGYEVLEAKSGVMTIHYKQGKPSE-GFNATYQIFSCP-DKCPENRTCI--NNQCVCP 319
D H G+ + K+GV + + + GF C E+ C + QC C
Sbjct: 1995 DPHSGHCL--CKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAAESSECHPQSGQCHCR 2052
Query: 320 PRRTGPDCQE 329
P GP C+E
Sbjct: 2053 PGTGGPQCRE 2062
Score = 49 (22.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEF--LNHGTC 345
+ QC C PR TG C ++C + F G+C
Sbjct: 676 SGQCSCRPRVTGLRC--DMCVPGAYNFPYCEAGSC 708
Score = 48 (22.0 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 301 CPDKCPENRT---CI----NNQCVCPPRRTGPDCQ 328
CP P N CI QC+C P G C+
Sbjct: 1876 CPLAVPSNNFATGCILRGGRTQCLCKPGYAGASCE 1910
Score = 46 (21.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 316 CVCPPRRTGPDCQE 329
C+CP G CQE
Sbjct: 1791 CMCPANYLGDSCQE 1804
Score = 45 (20.9 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 317 VCPPRRTGPDCQEEICPNECHE-FLNHGTCD 346
+C P GP CQ P +C + GTCD
Sbjct: 511 LCAPGFYGPGCQ----PCQCSSPGVVDGTCD 537
Score = 44 (20.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHE 338
+C CPP G C E C ++ H+
Sbjct: 2091 RCTCPPGLGGERC--ETCSHQ-HQ 2111
Score = 43 (20.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 313 NNQCVCPPRRTGPDC 327
N QC C P G C
Sbjct: 777 NGQCFCKPHVCGQTC 791
Score = 43 (20.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 310 TC--INNQCVCPPRRTGPDCQE 329
TC + QC C GP C +
Sbjct: 1553 TCDPLTGQCYCKENVQGPRCDQ 1574
Score = 43 (20.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 315 QCVCPPRRTGPDC 327
+C+C P GP C
Sbjct: 587 RCLCRPEFNGPHC 599
Score = 42 (19.8 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 316 CVCPPRRTGPDCQEEIC 332
CVC P G C E+C
Sbjct: 498 CVCKPNFQGTHC--ELC 512
Score = 40 (19.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 303 DKCPENRTCINNQCVCPPRRTGPDCQEEIC-PN--ECH 337
D+C E C P GP + C P +CH
Sbjct: 2013 DRCQEGHFGFEGCEGCRPCACGPAAESSECHPQSGQCH 2050
Score = 40 (19.1 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 6/14 (42%), Positives = 7/14 (50%)
Query: 316 CVCPPRRTGPDCQE 329
C+C P G C E
Sbjct: 831 CMCRPNTQGSTCSE 844
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVH 353
C C P T P+ ++ C N CD G H
Sbjct: 570 CGCSPVGTLPEGCDDAGRCLCRPEFNGPHCDRCRLGYH 607
>MGI|MGI:99914 [details] [associations]
symbol:Lamc1 "laminin, gamma 1" species:10090 "Mus musculus"
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=ISO]
[GO:0006461 "protein complex assembly" evidence=ISO] [GO:0007155
"cell adhesion" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO] [GO:0022617 "extracellular matrix disassembly"
evidence=ISO] [GO:0031012 "extracellular matrix" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IPI] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:99914 GO:GO:0016477
GO:GO:0006461 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_127416 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0043259 HOVERGEN:HBG100808
OrthoDB:EOG49GKFS EMBL:X05211 EMBL:J03484 EMBL:J02930 EMBL:J03749
IPI:IPI00400016 PIR:A28469 PIR:S55783 UniGene:Mm.1249 PDB:1KLO
PDB:1NPE PDB:1TLE PDB:4AQT PDBsum:1KLO PDBsum:1NPE PDBsum:1TLE
PDBsum:4AQT ProteinModelPortal:P02468 SMR:P02468 MINT:MINT-1031545
STRING:P02468 PhosphoSite:P02468 PaxDb:P02468 PRIDE:P02468
UCSC:uc007czu.1 InParanoid:P02468 EvolutionaryTrace:P02468
CleanEx:MM_LAMC1 Genevestigator:P02468
GermOnline:ENSMUSG00000026478 Uniprot:P02468
Length = 1607
Score = 194 (73.4 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 50/131 (38%), Positives = 61/131 (46%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDW 87
+ C C+ GY + P LG C V C CN HS TC G+CD C D
Sbjct: 694 YGGQFC-ETCLPGYRRETPS------LGPYS-PC-VLCTCNGHSETCDPETGVCD-CRDN 743
Query: 88 TTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNC 144
T G HC+ C G YG++T T C+ C C G+S V + C C T GK C
Sbjct: 744 TAGPHCEKCSDGYYGDSTLGTSSDCQPCPCPG-GSSCAIVPKTKEVVCTHCPTGTAGKRC 802
Query: 145 ERCLPGYYGDP 155
E C GY+GDP
Sbjct: 803 ELCDDGYFGDP 813
Score = 177 (67.4 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 36/94 (38%), Positives = 51/94 (54%)
Query: 62 CSVNCLCN---NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
CS C C+ + ST G C C GD C C+ G + + T+ GCR C C+
Sbjct: 393 CSP-CHCSPVGSLSTQCDSYGRCS-CKPGVMGDKCDRCQPGFH--SLTEAGCRPCSCDLR 448
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
G++ C+ TG C+C+DN +G NCERC PG++
Sbjct: 449 GST--DECNVETGRCVCKDNVEGFNCERCKPGFF 480
Score = 175 (66.7 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 43/133 (32%), Positives = 62/133 (46%)
Query: 34 CYNKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCV----HGIGICDECHDWT 88
C + +C+ D Y LG T DC C C S+C +C C T
Sbjct: 740 CRDNTAGPHCEKCSDGYYGDSTLG-TSSDCQP-CPCPGGSSCAIVPKTKEVVCTHCPTGT 797
Query: 89 TGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGK 142
G C+ C G +G+ G CR C CN + + + +G C+ +TGEC+ C NT G
Sbjct: 798 AGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGF 857
Query: 143 NCERCLPGYYGDP 155
C+RC G++G+P
Sbjct: 858 YCDRCKEGFFGNP 870
Score = 175 (66.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 50/165 (30%), Positives = 77/165 (46%)
Query: 16 DALSRCTVL----LLYIFNASLCY-NKCIYGYCKGP--PDYSCQCELGWTGVDCSVNCLC 68
+A+ C L L I+N + Y ++C G+ P P+ + +C+ C+
Sbjct: 835 NAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCK----ACACNPYGTV 890
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
S+C G C +C +G C C G Y N + +GC +CDC++ G S G CD
Sbjct: 891 QQQSSCNPVTGQC-QCLPHVSGRDCGTCDPGYY-NLQSGQGCERCDCHALG-STNGQCDI 947
Query: 129 ITGECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCMARGMLT 172
TG+C CQ G++CERC ++G +G C C G L+
Sbjct: 948 RTGQCECQPGITGQHCERCETNHFGFGPEGCKPC--DCHHEGSLS 990
Score = 163 (62.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 36/116 (31%), Positives = 51/116 (43%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNSH 118
C+ N N C G C +C T G +C C+ G +GN + C+ C CN +
Sbjct: 828 CNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPY 887
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
G C+ +TG+C C + G++C C PGYY + G C A G G
Sbjct: 888 GTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNG 943
Score = 156 (60.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 36/112 (32%), Positives = 50/112 (44%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
G C P Y+ Q G DC + L + + C G C EC TG HC+ C
Sbjct: 915 GTCD-PGYYNLQSGQGCERCDC--HALGSTNGQCDIRTGQC-ECQPGITGQHCERCETNH 970
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G EGC+ CDC+ G+ L D G C C++ G C++C Y+
Sbjct: 971 FGFGP--EGCKPCDCHHEGSLSLQCKDD--GRCECREGFVGNRCDQCEENYF 1018
Score = 152 (58.6 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 32/73 (43%), Positives = 37/73 (50%)
Query: 90 GDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C+ C G Y T G C C CN H + CD TG C C+DNT G +CE
Sbjct: 696 GQFCETCLPG-YRRETPSLGPYSPCVLCTCNGHSET----CDPETGVCDCRDNTAGPHCE 750
Query: 146 RCLPGYYGDPTDG 158
+C GYYGD T G
Sbjct: 751 KCSDGYYGDSTLG 763
Score = 51 (23.0 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 21/65 (32%), Positives = 26/65 (40%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTGVHITHGRTLHYQV-DLIRCTC 371
QC C P TG C+ C F G CD H H +L Q D RC C
Sbjct: 951 QCECQPGITGQHCER--CETNHFGFGPEGCKPCDC-----H--HEGSLSLQCKDDGRCEC 1001
Query: 372 RQVYL 376
R+ ++
Sbjct: 1002 REGFV 1006
Score = 45 (20.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 312 INNQCVCPPRRTGPDC 327
+ QC C P +G DC
Sbjct: 899 VTGQCQCLPHVSGRDC 914
Score = 41 (19.5 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 51 CQCELGWTGVDCSVNCL 67
C C+ GVDC CL
Sbjct: 303 CNCKHNTYGVDCE-KCL 318
Score = 37 (18.1 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 310 TCINNQCVCPPRRTGPDCQEEICPNECHE 338
TC + C P DC++ C +
Sbjct: 723 TCNGHSETCDPETGVCDCRDNTAGPHCEK 751
>UNIPROTKB|F1MAA7 [details] [associations]
symbol:Lamc1 "Protein Lamc1" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0022617 "extracellular matrix disassembly" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0043259
"laminin-10 complex" evidence=IEA] RGD:621052 GO:GO:0016477
GO:GO:0006461 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 GO:GO:0031175 GO:GO:0031581 GO:GO:0022617
GO:GO:0005201 GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 CTD:3915 KO:K05635
OMA:EATDYPW IPI:IPI00363849 RefSeq:NP_446418.1 UniGene:Rn.7145
ProteinModelPortal:F1MAA7 Ensembl:ENSRNOT00000003605 GeneID:117036
KEGG:rno:117036 NextBio:619829 Uniprot:F1MAA7
Length = 1607
Score = 194 (73.4 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 50/131 (38%), Positives = 61/131 (46%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDW 87
+ C C+ GY + P LG C V C CN HS TC G+CD C D
Sbjct: 694 YGGQFC-ETCLPGYRRETPS------LGPYS-PC-VLCTCNGHSETCDPETGVCD-CRDN 743
Query: 88 TTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNC 144
T G HC+ C G YG++T T C+ C C G+S V + C C T GK C
Sbjct: 744 TAGPHCEKCSDGYYGDSTLGTSSDCQPCPCPG-GSSCAIVPKTKEVVCTHCPTGTAGKRC 802
Query: 145 ERCLPGYYGDP 155
E C GY+GDP
Sbjct: 803 ELCDDGYFGDP 813
Score = 175 (66.7 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 43/133 (32%), Positives = 62/133 (46%)
Query: 34 CYNKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCV----HGIGICDECHDWT 88
C + +C+ D Y LG T DC C C S+C +C C T
Sbjct: 740 CRDNTAGPHCEKCSDGYYGDSTLG-TSSDCQP-CPCPGGSSCAIVPKTKEVVCTHCPTGT 797
Query: 89 TGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGK 142
G C+ C G +G+ G CR C CN + + + +G C+ +TGEC+ C NT G
Sbjct: 798 AGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGF 857
Query: 143 NCERCLPGYYGDP 155
C+RC G++G+P
Sbjct: 858 YCDRCKEGFFGNP 870
Score = 173 (66.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 50/165 (30%), Positives = 76/165 (46%)
Query: 16 DALSRCTVL----LLYIFNASLCY-NKCIYGYCKGP--PDYSCQCELGWTGVDCSVNCLC 68
+A+ C L L I+N + Y ++C G+ P P+ + +C+ C+
Sbjct: 835 NAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCK----ACACNPYGTV 890
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
S+C G C +C +G C C G Y N + +GC CDC++ G S G CD
Sbjct: 891 QQQSSCNPVTGQC-QCLPHVSGRDCGACDPGFY-NLQSGQGCESCDCHALG-STNGQCDI 947
Query: 129 ITGECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCMARGMLT 172
TG+C CQ G++CERC ++G +G C C G L+
Sbjct: 948 RTGQCECQPGITGQHCERCETNHFGFGPEGCKPC--DCHHEGSLS 990
Score = 172 (65.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 62 CSVNCLCN---NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
CS C C+ + ST G C C GD C C+ G + + T+ GCR C C+
Sbjct: 393 CSP-CHCSPVGSLSTQCDSYGRCS-CKPGVMGDKCDRCQPGFH--SLTEAGCRPCSCDPS 448
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
G++ C+ TG C+C+DN +G +CERC PG++
Sbjct: 449 GST--DECNVETGRCVCKDNVEGFSCERCKPGFF 480
Score = 159 (61.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 35/116 (30%), Positives = 51/116 (43%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNSH 118
C+ N N C G C +C T G +C C+ G +GN + C+ C CN +
Sbjct: 828 CNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPY 887
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
G C+ +TG+C C + G++C C PG+Y + G C A G G
Sbjct: 888 GTVQQQSSCNPVTGQCQCLPHVSGRDCGACDPGFYNLQSGQGCESCDCHALGSTNG 943
Score = 158 (60.7 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 36/112 (32%), Positives = 50/112 (44%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
G C P Y+ Q G DC + L + + C G C EC TG HC+ C
Sbjct: 915 GACD-PGFYNLQSGQGCESCDC--HALGSTNGQCDIRTGQC-ECQPGITGQHCERCETNH 970
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G EGC+ CDC+ G+ L D G C C++ G C++C Y+
Sbjct: 971 FGFGP--EGCKPCDCHHEGSLSLQCKDD--GRCECREGFVGNRCDQCEENYF 1018
Score = 152 (58.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 32/73 (43%), Positives = 37/73 (50%)
Query: 90 GDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C+ C G Y T G C C CN H + CD TG C C+DNT G +CE
Sbjct: 696 GQFCETCLPG-YRRETPSLGPYSPCVLCTCNGHSET----CDPETGVCDCRDNTAGPHCE 750
Query: 146 RCLPGYYGDPTDG 158
+C GYYGD T G
Sbjct: 751 KCSDGYYGDSTLG 763
Score = 51 (23.0 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 21/65 (32%), Positives = 26/65 (40%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTGVHITHGRTLHYQV-DLIRCTC 371
QC C P TG C+ C F G CD H H +L Q D RC C
Sbjct: 951 QCECQPGITGQHCER--CETNHFGFGPEGCKPCDC-----H--HEGSLSLQCKDDGRCEC 1001
Query: 372 RQVYL 376
R+ ++
Sbjct: 1002 REGFV 1006
Score = 45 (20.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 312 INNQCVCPPRRTGPDC 327
+ QC C P +G DC
Sbjct: 899 VTGQCQCLPHVSGRDC 914
Score = 37 (18.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 310 TCINNQCVCPPRRTGPDCQEEICPNECHE 338
TC + C P DC++ C +
Sbjct: 723 TCNGHSETCDPETGVCDCRDNTAGPHCEK 751
>ZFIN|ZDB-GENE-050310-1 [details] [associations]
symbol:ntn4 "netrin 4" species:7955 "Danio rerio"
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-1 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG082019 EMBL:BC163582 IPI:IPI00864479
UniGene:Dr.84045 ProteinModelPortal:B3DJR9 HOGENOM:HOG000168430
Uniprot:B3DJR9
Length = 593
Score = 192 (72.6 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 43/116 (37%), Positives = 62/116 (53%)
Query: 56 GWTG-VDCSVNCLCNNHS-TC------------VHGIGICDECHDWTTGDHCQYCRAGSY 101
G TG + V C CN H+ +C HG G+CD H+ TTG HCQ+C++G Y
Sbjct: 306 GLTGEANQCVECKCNGHAESCHFDESIWLRSGQQHG-GVCDCLHN-TTGQHCQHCQSGFY 363
Query: 102 GN----ATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+ +T + C C CN G+S C GEC+C+ G++CE+C+ GY+G
Sbjct: 364 RDPEKPSTAPDSCTPCMCNHVGSSY---CKPDNGECVCKPGVAGRHCEQCMLGYWG 416
Score = 124 (48.7 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 35/106 (33%), Positives = 42/106 (39%)
Query: 75 VHGIGICDECHDWTTGDHCQYC------RAGSYGNATTQEG--CRKCDCNSHGNSV---- 122
VHG C C T GDHC+ C R + T E C +C CN H S
Sbjct: 274 VHGK--CS-CRHHTAGDHCERCHRLYNDRPWRAADGLTGEANQCVECKCNGHAESCHFDE 330
Query: 123 ---LGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
L G C C NT G++C+ C G+Y DP T C
Sbjct: 331 SIWLRSGQQHGGVCDCLHNTTGQHCQHCQSGFYRDPEKPSTAPDSC 376
Score = 47 (21.6 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 313 NNQCVCPPRRTGPDCQE 329
N +CVC P G C++
Sbjct: 393 NGECVCKPGVAGRHCEQ 409
>UNIPROTKB|F1MAN8 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 IPI:IPI00190577
Ensembl:ENSRNOT00000008981 ArrayExpress:F1MAN8 Uniprot:F1MAN8
Length = 3719
Score = 188 (71.2 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 41/118 (34%), Positives = 53/118 (44%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNN-HSTCVHGIGICDECHDWTTGDHCQY 95
+C G+ P C+ DCS N N S C G C C TTG C+
Sbjct: 1954 RCAPGFFGNPLVLGSSCQ----PCDCSGNGDPNMIFSDCDPLTGACRGCLRHTTGPRCES 2009
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C G YGNA C +CDC+ G CD TG C+C+ G+ C+ CL G++G
Sbjct: 2010 CAPGFYGNALLPGNCTRCDCSPCGTET---CDPQTGRCLCKAGVTGQRCDHCLEGHFG 2064
Score = 176 (67.0 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 44/132 (33%), Positives = 63/132 (47%)
Query: 41 GYCKGPPDYS---C-QCELGWTGV-DCSVNCLCNNHST----CVHGIGICDECHDWTTGD 91
G+C+ P + C +C G+ G DC C C+ + C G G+C C TG
Sbjct: 608 GHCQCRPGFDGPHCDRCLPGYHGYPDCHA-CACDPRGSLDQQCGAG-GLC-HCRPGYTGA 664
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
CQ C G YG + C C C++ G S+ CD TG+C C+ G C+ C+PG
Sbjct: 665 TCQECSPGFYGFPS----CIPCHCSADG-SMHTTCDPTTGQCRCRPRVTGLRCDMCVPGA 719
Query: 152 YGDP-TDGGTCY 162
Y P + G+C+
Sbjct: 720 YNFPYCEAGSCH 731
Score = 173 (66.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 39/120 (32%), Positives = 53/120 (44%)
Query: 47 PDYSCQCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT 105
P SC C L + + C+ N T C+ C G C+ C G +GN
Sbjct: 1913 PCVSCPCPLAVPSNNFADGCILRNGRTQCL--------CRPGYAGASCERCAPGFFGNPL 1964
Query: 106 TQ-EGCRKCDCNSHG--NSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTC 161
C+ CDC+ +G N + CD +TG C C +T G CE C PG+YG+ G C
Sbjct: 1965 VLGSSCQPCDCSGNGDPNMIFSDCDPLTGACRGCLRHTTGPRCESCAPGFYGNALLPGNC 2024
Score = 168 (64.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 49/154 (31%), Positives = 66/154 (42%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQ-CELGW----TGVDCS--VNCLCNNHST-CVHGIGIC 81
N LC C Y +G SCQ C G+ G+ V C C+ HS C+ G G C
Sbjct: 1830 NVELCM--CPANY-RGD---SCQECAPGYYRDTKGLFLGRCVPCQCHGHSDRCLPGSGTC 1883
Query: 82 DECHDWTTGDHCQYCRAGSYGNATTQEG--CRKCDCNSH--GNSVLGVCDSITG--ECIC 135
C T GD C+ CR G + + C C C N+ C G +C+C
Sbjct: 1884 VGCQHNTEGDQCERCRPGFVSSDPSDPASPCVSCPCPLAVPSNNFADGCILRNGRTQCLC 1943
Query: 136 QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
+ G +CERC PG++G+P G+ C G
Sbjct: 1944 RPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSG 1977
Score = 161 (61.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 45/139 (32%), Positives = 61/139 (43%)
Query: 41 GYCKGPPDYS---CQ-CELGWTGVDCSVNCLCNN----HSTCVHGIGICDECHDWTTGDH 92
G C P++ C+ C G+ G C C C++ + C G C C GD
Sbjct: 518 GRCVCKPNFQGNHCELCAPGFYGPSCHP-CQCSSPGVANGLCDPESGQCT-CRTGFEGDK 575
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C +C G + C+ C C+ G G CD +G C C+ G +C+RCLPGY+
Sbjct: 576 CDHCALGYFHFPL----CQLCGCSPAGTLPQG-CDE-SGHCQCRPGFDGPHCDRCLPGYH 629
Query: 153 GDPTDGGTCYYQCMARGML 171
G P D C C RG L
Sbjct: 630 GYP-DCHAC--ACDPRGSL 645
Score = 155 (59.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 41/113 (36%), Positives = 47/113 (41%)
Query: 58 TGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNS 117
T DCS C TC G C C TG C +C G +G Q GC C C
Sbjct: 2025 TRCDCSP---CGTE-TCDPQTGRC-LCKAGVTGQRCDHCLEGHFGFEQCQ-GCHPCACGP 2078
Query: 118 HGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCMARG 169
C+ TG+C C+ T G C C PGY+G P G C QC RG
Sbjct: 2079 AAEG--SECNPQTGQCHCRPGTTGPQCLECAPGYWGLPEKGCRRC--QC-PRG 2126
Score = 154 (59.3 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 39/131 (29%), Positives = 57/131 (43%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCN-NHSTCVHGIG-ICDE-CHDWTTGDHCQYCRAG 99
C+ P + C +G +CS + TC G +C C G C C G
Sbjct: 1516 CQ-PQSFGCHPLVGCEECNCSGPGVQELTDPTCDMDSGHLCPHRCRPNVAGRRCDTCAPG 1574
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDG 158
Y + CR CDC+ G ++ VCD TG+C C++N QG C++C G + D +
Sbjct: 1575 FY----SYPSCRPCDCHEAG-TMASVCDPFTGQCHCKENVQGSRCDQCRVGTFSLDAANP 1629
Query: 159 GTCYYQCMARG 169
C +C G
Sbjct: 1630 KGCT-RCFCFG 1639
Score = 147 (56.8 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 42/144 (29%), Positives = 58/144 (40%)
Query: 41 GYCKGPPDYS---CQ-CELGWTGVDCSVNCLCNN----HSTCVHGIGICDECHDWTTGDH 92
G C P Y+ CQ C G+ G + C C+ H+TC G C C TG
Sbjct: 653 GLCHCRPGYTGATCQECSPGFYGFPSCIPCHCSADGSMHTTCDPTTGQC-RCRPRVTGLR 711
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGY 151
C C G+Y + G C+ G + C C+ + +G +C+RC PGY
Sbjct: 712 CDMCVPGAYNFPYCEAG----SCHPAGLAPANPALPEAQAPCTCRAHVEGPSCDRCKPGY 767
Query: 152 YGDPTDG--GTCYYQCMARGMLTG 173
+G + G C RG L G
Sbjct: 768 WGLSSSNPEGCTRCSCDPRGTLGG 791
Score = 135 (52.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 84 CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGV--CDSITGECICQDNTQ 140
C G C C+ G +G +++ EGC +C C+ G ++ GV C G+C C+ +
Sbjct: 751 CRAHVEGPSCDRCKPGYWGLSSSNPEGCTRCSCDPRG-TLGGVTECQG-NGQCFCKAHVC 808
Query: 141 GKNCERCLPGYYG-DPTDGGTCYYQC 165
GK C C G++G D D YY C
Sbjct: 809 GKTCAACKDGFFGLDHAD----YYGC 830
Score = 133 (51.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 44/156 (28%), Positives = 66/156 (42%)
Query: 37 KCIYGYCKGPPD-----YSCQ---CELGWTGVDC---SVNCLCNNHSTCVHGIGICDECH 85
+C+ G+ + P + CQ CE +T C + C C + T C C
Sbjct: 411 RCVPGFYRAPDQPLDSPHVCQPCDCESDFTDGTCEDLTGRCYCRPNFTGER----CSACA 466
Query: 86 D-WTTGDHCQYCRAGSYGNATTQ---EG-CRKCDCNSHGNSVLGVC--DSITGECICQDN 138
+ + HC + + + Q G CDCN+ G C D G C+C+ N
Sbjct: 467 EGYVDFPHCYPLPSFPHNDTGEQVLPAGQIVNCDCNAAGTQG-NACRKDPRLGRCVCKPN 525
Query: 139 TQGKNCERCLPGYYGDPTDGGTCY-YQCMARGMLTG 173
QG +CE C PG+YG P+ C+ QC + G+ G
Sbjct: 526 FQGNHCELCAPGFYG-PS----CHPCQCSSPGVANG 556
Score = 130 (50.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 38/123 (30%), Positives = 53/123 (43%)
Query: 42 YCKGPPDYSC-QCELGWTGVDCS-----VNCLCNNHSTC-----VHGIGICDECHDWTTG 90
+ +GP SC +C+ G+ G+ S C C+ T G G C C G
Sbjct: 754 HVEGP---SCDRCKPGYWGLSSSNPEGCTRCSCDPRGTLGGVTECQGNGQCF-CKAHVCG 809
Query: 91 DHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
C C+ G +G + GCR C C+ G G C+ TG C C+ NTQG +C
Sbjct: 810 KTCAACKDGFFGLDHADYYGCRSCRCDVGGALGQG-CEPKTGACRCRPNTQGPSCSEPAK 868
Query: 150 GYY 152
+Y
Sbjct: 869 DHY 871
Score = 128 (50.1 bits), Expect = 0.00043, P = 0.00043
Identities = 37/113 (32%), Positives = 44/113 (38%)
Query: 43 CK-GPPDYSCQ-CELGWTGVD-CSV--NCLCN---NHSTCVHGIGICDECHDWTTGDHCQ 94
CK G C C G G + C C C S C G C C TTG C
Sbjct: 2046 CKAGVTGQRCDHCLEGHFGFEQCQGCHPCACGPAAEGSECNPQTGQC-HCRPGTTGPQCL 2104
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
C G +G ++GCR+C C G CD TG C C G+ C+ C
Sbjct: 2105 ECAPGYWG--LPEKGCRRCQCPR------GHCDPHTGRCTCPPGLSGERCDTC 2149
Score = 110 (43.8 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 35/104 (33%), Positives = 48/104 (46%)
Query: 64 VNCLCNNHSTCVHGIGICDEC------HDW---TT--GDHCQYCRAGSYGNATTQEGCRK 112
+ C C H+TC G G CD C W TT + CQ C +G+A +
Sbjct: 324 LQCACQ-HNTC--G-GSCDRCCPGFNQQPWKPATTDSANECQSCNC--HGHAYDCYYDPE 377
Query: 113 CDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
D + ++ V G C+ CQ +T G NCERC+PG+Y P
Sbjct: 378 VDRRNASQNLDNVYQG-GGVCLDCQHHTTGINCERCVPGFYRAP 420
Score = 78 (32.5 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 21/59 (35%), Positives = 27/59 (45%)
Query: 300 SC-PDKCPENRTC--INNQCVCPPRRTGPDCQEEIC-PNE--CHEFLNHGTCDLLLTGV 352
+C P C R C + QC+CPPR PDC +C P CH + C+ GV
Sbjct: 1484 NCRPCDCGA-RLCDELTGQCICPPRTVPPDCL--VCQPQSFGCHPLVGCEECNCSGPGV 1539
Score = 53 (23.7 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 18/46 (39%), Positives = 18/46 (39%)
Query: 290 EGFNATYQIFSC-PDKC-P--ENRTCI--NNQCVCPPRRTGPDCQE 329
EG Q C P C P E C QC C P TGP C E
Sbjct: 2060 EGHFGFEQCQGCHPCACGPAAEGSECNPQTGQCHCRPGTTGPQCLE 2105
Score = 51 (23.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/66 (33%), Positives = 27/66 (40%)
Query: 289 SEGFNATYQIFSC-PDKCPEN----RTC--INNQCVCPPRRTGPDCQEEICPNECHEF-- 339
S GF Y SC P C + TC QC C PR TG C ++C + F
Sbjct: 670 SPGF---YGFPSCIPCHCSADGSMHTTCDPTTGQCRCRPRVTGLRC--DMCVPGAYNFPY 724
Query: 340 LNHGTC 345
G+C
Sbjct: 725 CEAGSC 730
Score = 47 (21.6 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 301 CPDKCPENRT---CI----NNQCVCPPRRTGPDCQ 328
CP P N CI QC+C P G C+
Sbjct: 1919 CPLAVPSNNFADGCILRNGRTQCLCRPGYAGASCE 1953
Score = 47 (21.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVH 353
C C P T P +E +C + CD L G H
Sbjct: 592 CGCSPAGTLPQGCDESGHCQCRPGFDGPHCDRCLPGYH 629
Score = 46 (21.3 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 304 KCPENRTCI--NNQCVCPPRRTGPDCQEEICPNECHE 338
+CP C +C CPP +G C + C + H+
Sbjct: 2122 QCPRGH-CDPHTGRCTCPPGLSGERC--DTCSQQ-HQ 2154
Score = 46 (21.3 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 316 CVCPPRRTGPDCQE 329
C+CP G CQE
Sbjct: 1834 CMCPANYRGDSCQE 1847
Score = 45 (20.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/14 (50%), Positives = 7/14 (50%)
Query: 316 CVCPPRRTGPDCQE 329
C C P GP C E
Sbjct: 852 CRCRPNTQGPSCSE 865
Score = 45 (20.9 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 300 SCPDKCPENRTC-INNQCVCPPRRTGPDCQE 329
+C + ++ C C C P TG CQE
Sbjct: 638 ACDPRGSLDQQCGAGGLCHCRPGYTGATCQE 668
Score = 44 (20.5 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 316 CVCPPRRTGPDCQEEICPNECH 337
C C P G +C + +CH
Sbjct: 2074 CACGPAAEGSECNPQT--GQCH 2093
Score = 42 (19.8 bits), Expect = 7.3e-08, Sum P(3) = 7.3e-08
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 323 TGPDCQEE---ICPNECHEFLNHGTCDLLLTGVH 353
T P C + +CP+ C + CD G +
Sbjct: 1543 TDPTCDMDSGHLCPHRCRPNVAGRRCDTCAPGFY 1576
Score = 40 (19.1 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 164 QCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQ 223
QC RG + G +G D +R C + GQ + T P D ++ + Q
Sbjct: 1460 QCPCRGHVIGRDCSRCATGYWGFPNCRPCDCGARLCDELTGQCICPPRTVPPDCLVCQPQ 1519
>UNIPROTKB|F1S0U7 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:CU550727 ProteinModelPortal:F1S0U7
Ensembl:ENSSSCT00000006293 Uniprot:F1S0U7
Length = 532
Score = 162 (62.1 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 39/106 (36%), Positives = 51/106 (48%)
Query: 56 GWTGVDCSVNCLCNNHST-CVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQ--- 107
G G DC C HS C + + C C T G HCQ+CR G Y N + +
Sbjct: 349 GLAGPDCE----CYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRNGSAELDD 404
Query: 108 EG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
E C +C+CN G SV C+ TG C C++ G C+ CLP +Y
Sbjct: 405 ENVCIECNCNQIG-SVHDRCNE-TGFCECREGAAGPKCDDCLPTHY 448
Score = 69 (29.3 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 305 CPENRTCINNQ-CVCPPRRTGPDCQEEIC 332
C TC+ NQ C CP TG C++ C
Sbjct: 465 CQNGGTCVQNQRCTCPRGYTGVRCEQPRC 493
Score = 41 (19.5 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 51 CQCELGWTGVDC 62
C+C+ TG DC
Sbjct: 242 CECDHNTTGPDC 253
>ZFIN|ZDB-GENE-990415-173 [details] [associations]
symbol:notch1a "notch homolog 1a" species:7955
"Danio rerio" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA;IGI] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050793 "regulation of developmental process" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0031017 "exocrine pancreas development" evidence=IMP]
[GO:0001756 "somitogenesis" evidence=IGI;IMP] [GO:0021986 "habenula
development" evidence=IMP] [GO:0007368 "determination of left/right
symmetry" evidence=IMP] [GO:0048699 "generation of neurons"
evidence=IMP] [GO:0021523 "somatic motor neuron differentiation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0048259 "regulation of
receptor-mediated endocytosis" evidence=IGI] [GO:0055016 "hypochord
development" evidence=IMP] [GO:0042663 "regulation of endodermal
cell fate specification" evidence=IMP] [GO:0048337 "positive
regulation of mesodermal cell fate specification" evidence=IMP]
[GO:0031016 "pancreas development" evidence=IMP] [GO:0001840
"neural plate development" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0021531 "spinal cord radial
glial cell differentiation" evidence=IMP] [GO:0048936 "peripheral
nervous system neuron axonogenesis" evidence=IGI]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 InterPro:IPR022362
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 ZFIN:ZDB-GENE-990415-173 GO:GO:0016021
GO:GO:0006355 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0004872 GO:GO:0006351 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0001756 GO:GO:0007368 PROSITE:PS01186 InterPro:IPR003645
SMART:SM00274 PROSITE:PS00010 GO:GO:0048259 InterPro:IPR019931
TIGRFAMs:TIGR01167 Pfam:PF12661 GO:GO:0031017 GO:GO:0021523
GO:GO:0001840 GO:GO:0042663 SUPFAM:SSF90193 GO:GO:0048936
GO:GO:0055016 EMBL:X69088 IPI:IPI00483779 PIR:S42612
RefSeq:NP_571516.1 UniGene:Dr.137595 UniGene:Dr.75753
ProteinModelPortal:P46530 SMR:P46530 STRING:P46530 GeneID:30718
KEGG:dre:30718 CTD:30718 HOGENOM:HOG000234369 HOVERGEN:HBG052650
KO:K02599 NextBio:20807067 GO:GO:0021986 GO:GO:0048337
GO:GO:0021531 InterPro:IPR024600 Pfam:PF11936 Uniprot:P46530
Length = 2437
Score = 158 (60.7 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 48/133 (36%), Positives = 60/133 (45%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGD 91
N CI+G C + Y C CE GW G +C +N CL N CV+G G C D T+G
Sbjct: 721 NPCIHGSCLDQINSYRCVCEAGWMGRNCDININECLSN---PCVNG-GTCK---DMTSGY 773
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLP 149
C CRAG + Q +C N N G C D + G +C C G+ CE L
Sbjct: 774 LCT-CRAG-FSGPNCQMNINECASNPCLNQ--GSCIDDVAGFKCNCMLPYTGEVCENVLA 829
Query: 150 GYYGDPT-DGGTC 161
P +GG C
Sbjct: 830 PCSPRPCKNGGVC 842
Score = 154 (59.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 89/345 (25%), Positives = 121/345 (35%)
Query: 41 GYCKGPP--DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGIC-DECHDWTTGDHCQYCR 97
G C+ P + SC+C + G C CN S C +G G+C + G C C
Sbjct: 33 GICEYKPSGEASCRCPADFVGAQCQFPNPCNP-SPCRNG-GVCRPQMQGNEVGVKCD-CV 89
Query: 98 AGSYGN---ATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
G C C + G L D+ T C CQ GK C+ P
Sbjct: 90 LGFSDRLCLTPVNHACMNSPCRNGGTCSLLTLDTFT--CRCQPGWSGKTCQLADPCASNP 147
Query: 155 PTDGGTCYYQCMARGMLTGPGPQGLGSGLAER-NAWEGKDTPSRE---CLWIIGQSLDSN 210
+GG C + + T P P G + N +P R C+ +G L
Sbjct: 148 CANGGQCS-AFESHYICTCP-PNFHGQTCRQDVNECAVSPSPCRNGGTCINEVGSYLCRC 205
Query: 211 STAPADIILLRL-QPDINVPCNENAVYIYDGLPDFVTSV--GGTHQSTTLGVF-CTEDM- 265
RL QP + PC + S G T Q+ V CT+
Sbjct: 206 PPEYTGPHCQRLYQPCLPSPCRSGGTCVQTSDTTHTCSCLPGFTGQTCEHNVDDCTQHAC 265
Query: 266 HRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSC---PDKCPENRTCINN----QCVC 318
G ++ G+ T + K G T + C P+ C TC N CVC
Sbjct: 266 ENGGPCID---GINTYNCHCDKHWTGQYCTEDVDECELSPNACQNGGTCHNTIGGFHCVC 322
Query: 319 PPRRTGPDCQEEICPNECHEFL-NHG-TC-DLLLTGV-HITHGRT 359
TG DC E I ++C +HG TC D + + HGRT
Sbjct: 323 VNGWTGDDCSENI--DDCASAACSHGATCHDRVASFFCECPHGRT 365
Score = 142 (55.0 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 49/164 (29%), Positives = 71/164 (43%)
Query: 30 NASLCYNK-CIYGYCKGPPD-YSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGIC 81
N C K C YG C + Y C CE G++G C++N C C+N TC+ G+
Sbjct: 639 NIDDCKRKPCDYGKCIDKINGYECVCEPGYSGSMCNINIDDCALNPCHNGGTCIDGV--- 695
Query: 82 DECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNT 139
+ +T C C G + +AT +C N + G C D I C+C+
Sbjct: 696 ---NSFT----C-LCPDG-FRDATCLSQHNECSSNP---CIHGSCLDQINSYRCVCEAGW 743
Query: 140 QGKNCERCLPGYYGDP-TDGGTCY-----YQCMARGMLTGPGPQ 177
G+NC+ + +P +GGTC Y C R +GP Q
Sbjct: 744 MGRNCDININECLSNPCVNGGTCKDMTSGYLCTCRAGFSGPNCQ 787
Score = 128 (50.1 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 37/127 (29%), Positives = 53/127 (41%)
Query: 41 GYCKGPPDY---SCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
G C+ D+ SC C GW G C V+ + C +G G+C+ G C+ C
Sbjct: 840 GVCRESEDFQSFSCNCPAGWQGQTCEVDINECVRNPCTNG-GVCENLRG---GFQCR-CN 894
Query: 98 AGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYYGDP 155
G G A + C+ N N GVC D + G C+C +G+ C + P
Sbjct: 895 PGFTG-ALCENDIDDCEPNPCSNG--GVCQDRVNGFVCVCLAGFRGERCAEDIDECVSAP 951
Query: 156 T-DGGTC 161
+GG C
Sbjct: 952 CRNGGNC 958
Score = 125 (49.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/119 (29%), Positives = 51/119 (42%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
Y+C C G++G++C +N S+C +G G C D + C C G GN Q
Sbjct: 965 YTCSCPAGFSGINCEINTPDCTESSCFNG-GTCV---DGISSFSC-VCLPGFTGNYC-QH 1018
Query: 109 GCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT-DGGTCYYQ 164
+CD N G C G +C C G NC+ + P +GG+C+ Q
Sbjct: 1019 DVNECDSRPCQNG--GSCQDGYGTYKCTCPHGYTGLNCQSLVRWCDSSPCKNGGSCWQQ 1075
Score = 125 (49.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 43/162 (26%), Positives = 60/162 (37%)
Query: 29 FNASLCY---NKCIYGYCK-------GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGI 78
F+ SLC ++C CK GP Y+C+C G++G+ C ++ S C +G+
Sbjct: 518 FSGSLCQVDVDECASTPCKNGAKCTDGPNKYTCECTPGFSGIHCELDINECASSPCHYGV 577
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQ 136
C D C CR G Y + +C N G C C C
Sbjct: 578 -----CRDGVASFTCD-CRPG-YTGRLCETNINECLSQPCRNG--GTCQDRENAYICTCP 628
Query: 137 DNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQG 178
T G NCE + P D G C + + PG G
Sbjct: 629 KGTTGVNCEINIDDCKRKPCDYGKCIDKINGYECVCEPGYSG 670
Score = 107 (42.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 40/141 (28%), Positives = 52/141 (36%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQ 107
+ C C GWTG DCS N + C HG CHD C+ C G G
Sbjct: 318 FHCVCVNGWTGDDCSENIDDCASAACSHGA----TCHDRVASFFCE-CPHGRTGLLCHLD 372
Query: 108 EGCRKCDCNSHGNSVLGVCDS--ITGE--CICQDNTQGKNC----ERCLPGYYGDPTD-G 158
+ C C N CD+ ++G+ C C G C + C G +P + G
Sbjct: 373 DACISNPCQKGSN-----CDTNPVSGKAICTCPPGYTGSACNQDIDECSLG--ANPCEHG 425
Query: 159 GTCY-----YQCMARGMLTGP 174
G C +QC GP
Sbjct: 426 GRCLNTKGSFQCKCLQGYEGP 446
Score = 93 (37.8 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 40/154 (25%), Positives = 63/154 (40%)
Query: 230 CNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPS 289
C IY +P V Q ++ V C H G + ++A + + +
Sbjct: 1083 CASGWTGIYCDVPSVSCEVAARQQGVSVAVLCR---HAG-QCVDAGNTHLC------RCQ 1132
Query: 290 EGFNATY---QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEF 339
G+ +Y Q+ C P+ C TC + C C P G +C +EI NEC
Sbjct: 1133 AGYTGSYCQEQVDECQPNPCQNGATCTDYLGGYSCECVPGYHGMNCSKEI--NECLSQPC 1190
Query: 340 LNHGTC-DLLLT-GVHITHG-RTLHYQVDLIRCT 370
N GTC DL+ T G + +H ++D+ C+
Sbjct: 1191 QNGGTCIDLVNTYKCSCPRGTQGVHCEIDIDDCS 1224
Score = 86 (35.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 45/159 (28%), Positives = 58/159 (36%)
Query: 12 TAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCS---VNCLC 68
T + D ++ C V N C N+ C+ PP+Y TG C CL
Sbjct: 173 TCRQD-VNECAVSPSPCRNGGTCINEVGSYLCRCPPEY--------TGPHCQRLYQPCL- 222
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-D 127
S C G G C + D T H C G G T + DC H G C D
Sbjct: 223 --PSPCRSG-GTCVQTSDTT---HTCSCLPGFTGQ-TCEHNVD--DCTQHACENGGPCID 273
Query: 128 SI-TGECICQDNTQGKNCERCLPGYYGDPT---DGGTCY 162
I T C C + G+ C + P +GGTC+
Sbjct: 274 GINTYNCHCDKHWTGQYCTEDVDECELSPNACQNGGTCH 312
Score = 71 (30.1 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 20/62 (32%), Positives = 26/62 (41%)
Query: 291 GFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHE--FLNHG 343
G N C + C TC++ CVC P TG CQ ++ NEC N G
Sbjct: 975 GINCEINTPDCTESSCFNGGTCVDGISSFSCVCLPGFTGNYCQHDV--NECDSRPCQNGG 1032
Query: 344 TC 345
+C
Sbjct: 1033 SC 1034
Score = 69 (29.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 21/62 (33%), Positives = 27/62 (43%)
Query: 291 GFNATYQIFSC-PDKCPENRTCINNQ----CVCPPRRTGPDCQEEICPNEC--HEFLNHG 343
G N I C + C TC + C C +GP+CQ I NEC + LN G
Sbjct: 745 GRNCDININECLSNPCVNGGTCKDMTSGYLCTCRAGFSGPNCQMNI--NECASNPCLNQG 802
Query: 344 TC 345
+C
Sbjct: 803 SC 804
Score = 61 (26.5 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 22/70 (31%), Positives = 27/70 (38%)
Query: 290 EGFNATYQIFSCP-DKCPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNECHEFLN 341
+G I C + C C N QC C P TG C+ +I C PN C N
Sbjct: 860 QGQTCEVDINECVRNPCTNGGVCENLRGGFQCRCNPGFTGALCENDIDDCEPNPCS---N 916
Query: 342 HGTCDLLLTG 351
G C + G
Sbjct: 917 GGVCQDRVNG 926
Score = 59 (25.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 300 SCPDKCPENRT-CINNQ-CVCPPRRTGPDCQEEICPNECHEF--LNHGTC 345
S P + N T C+N+ C CP +G +C EI +C E N GTC
Sbjct: 949 SAPCRNGGNCTDCVNSYTCSCPAGFSGINC--EINTPDCTESSCFNGGTC 996
Score = 58 (25.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTG 351
C E+ + C CP G C+ +I NEC + N G C+ L G
Sbjct: 842 CRESEDFQSFSCNCPAGWQGQTCEVDI--NECVRNPCTNGGVCENLRGG 888
Score = 56 (24.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 312 INN-QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTG 351
IN+ +CVC G +C I NEC + +N GTC + +G
Sbjct: 732 INSYRCVCEAGWMGRNCDINI--NECLSNPCVNGGTCKDMTSG 772
Score = 54 (24.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 291 GFNATY---QIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNH 342
GF Y + C + C +C + +C CP TG +CQ + + N
Sbjct: 1010 GFTGNYCQHDVNECDSRPCQNGGSCQDGYGTYKCTCPHGYTGLNCQSLVRWCDSSPCKNG 1069
Query: 343 GTC 345
G+C
Sbjct: 1070 GSC 1072
Score = 51 (23.0 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 16/60 (26%), Positives = 22/60 (36%)
Query: 291 GFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G N I C C +CI++ +C C TG C+ + P N G C
Sbjct: 783 GPNCQMNINECASNPCLNQGSCIDDVAGFKCNCMLPYTGEVCENVLAPCSPRPCKNGGVC 842
Score = 47 (21.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 18/55 (32%), Positives = 22/55 (40%)
Query: 298 IFSC-PDKCPENRTC---INN-QCVCPPRRTGPDCQEEICPNECHEF--LNHGTC 345
I C P+ C C +N CVC G C E+I +EC N G C
Sbjct: 906 IDDCEPNPCSNGGVCQDRVNGFVCVCLAGFRGERCAEDI--DECVSAPCRNGGNC 958
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 314 NQCVCPPRRTGPDCQEEICPN 334
++CV P R G +C + C N
Sbjct: 945 DECVSAPCRNGGNCTD--CVN 963
Score = 38 (18.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 12/48 (25%), Positives = 18/48 (37%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGP--DCQEEICPNECHEFLNHGTCD 346
C +C N C + C P +C + +C + N G CD
Sbjct: 1461 CDTQC-NNHACGWDGGDCSLNFDDPWQNCSAAL---QCWRYFNDGKCD 1504
>UNIPROTKB|Q96CW9 [details] [associations]
symbol:NTNG2 "Netrin-G2" species:9606 "Homo sapiens"
[GO:0046658 "anchored to plasma membrane" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR013111 Pfam:PF07974
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
PDB:3ZYI PDBsum:3ZYI eggNOG:NOG286598 HOVERGEN:HBG052676
EMBL:AB058760 EMBL:AY358165 EMBL:AL353631 EMBL:AL159997
EMBL:BC013770 IPI:IPI00432766 IPI:IPI00843936 RefSeq:NP_115925.2
UniGene:Hs.163642 PDB:3TBD PDB:3ZYG PDBsum:3TBD PDBsum:3ZYG
ProteinModelPortal:Q96CW9 SMR:Q96CW9 IntAct:Q96CW9 STRING:Q96CW9
PhosphoSite:Q96CW9 DMDM:34922606 PRIDE:Q96CW9
Ensembl:ENST00000372179 Ensembl:ENST00000393229 GeneID:84628
KEGG:hsa:84628 UCSC:uc004cbh.2 CTD:84628 GeneCards:GC09P135037
H-InvDB:HIX0008489 HGNC:HGNC:14288 neXtProt:NX_Q96CW9
PharmGKB:PA134962540 HOGENOM:HOG000231614 KO:K16359
OrthoDB:EOG47D9FR GenomeRNAi:84628 NextBio:74534
ArrayExpress:Q96CW9 Bgee:Q96CW9 CleanEx:HS_NTNG2
Genevestigator:Q96CW9 GermOnline:ENSG00000196358 Uniprot:Q96CW9
Length = 530
Score = 166 (63.5 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 37/97 (38%), Positives = 49/97 (50%)
Query: 65 NCLCNNHST-CVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EG-CRKCDC 115
NC C HS C + + C C T G HCQ+CR G Y N + + E C +C+C
Sbjct: 352 NCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNC 411
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
N G SV C+ TG C C++ G C+ CLP +Y
Sbjct: 412 NQIG-SVHDRCNE-TGFCECREGAAGPKCDDCLPTHY 446
Score = 107 (42.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 28/96 (29%), Positives = 42/96 (43%)
Query: 63 SVNCLCNNHSTCVHGIGICDE---CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHG 119
S+ C C H+T G C + W G + GS T C+C H
Sbjct: 302 SLQCECE-HNTTGPDCGKCKKNFRTRSWRAGSYLPLPH-GSPNACATAGSFGNCECYGHS 359
Query: 120 N--SVLGVCDSITGECI-CQDNTQGKNCERCLPGYY 152
N S + + +T C+ C+ NT+G++C+ C GYY
Sbjct: 360 NRCSYIDFLNVVT--CVSCKHNTRGQHCQHCRLGYY 393
Score = 68 (29.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 305 CPENRTCINNQ-CVCPPRRTGPDCQEEIC 332
C TC+ NQ C CP TG C++ C
Sbjct: 463 CQNGGTCLQNQRCACPRGYTGVRCEQPRC 491
>UNIPROTKB|F1NXF9 [details] [associations]
symbol:Gga.18391 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662
GeneTree:ENSGT00690000101691 EMBL:AADN02021036 EMBL:AADN02021034
EMBL:AADN02021035 IPI:IPI00587188 ProteinModelPortal:F1NXF9
Ensembl:ENSGALT00000015394 OMA:YECACKE Uniprot:F1NXF9
Length = 1371
Score = 175 (66.7 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 42/116 (36%), Positives = 60/116 (51%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCR 111
C +G+ G +C + C C++ + C H G C C TG C++ C +G +G + C
Sbjct: 660 CPVGYYGQNCQLPCSCSSDALCHHITGECT-CPPGWTGHDCKHPCNSGRWG-----QHCE 713
Query: 112 K-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYGDPTDGGTCYYQC 165
C CN NS G CD +TG C C+ GK+CE RC G +G P+ +C QC
Sbjct: 714 NSCACN---NSD-GSCDPVTGSCFCEPGFTGKHCEQRCPEGSFG-PSCMHSC--QC 762
Score = 173 (66.0 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 44/120 (36%), Positives = 52/120 (43%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C PP CQ C G G C + C C N + C H G C WT G C+
Sbjct: 1116 GSCTCPPGQMGPGCQQVCPQGRFGPSCRLTCSCQNGAICDHVDGSCTCGLGWT-GKSCEK 1174
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
C G YG C DC+ N G CD TG C+C G++CE C PG+YG
Sbjct: 1175 ECLPGKYG-----PNC-SLDCSCQHN---GTCDRFTGCCLCPAGFYGRSCEHGCPPGFYG 1225
Score = 167 (63.8 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 43/119 (36%), Positives = 54/119 (45%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR 111
C G+ G+DC C C N C H +G C W G+ C Q C+ +G +GC
Sbjct: 790 CPEGFFGLDCHQVCNCKNAEGCDHVLGTCRCLPGWR-GETCEQPCQGDRFG-----QGCA 843
Query: 112 KCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGYYGDPTDGGTCYYQCMARG 169
CN H N L CD ITG C C G C E C PG++G G C +C+ G
Sbjct: 844 HT-CNCH-NGAL--CDHITGTCACTPGWGGATCQEACPPGWHG----AG-CLQRCICPG 893
Score = 163 (62.4 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 52/159 (32%), Positives = 65/159 (40%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDECHD 86
C N I + G SC C LGWTG C CL C+ +C H G CD
Sbjct: 1148 CQNGAICDHVDG----SCTCGLGWTGKSCEKECLPGKYGPNCSLDCSCQHN-GTCDRF-- 1200
Query: 87 WTTGDHCQYCRAGSYGNATTQEGC----------RKCDCNSHGNSVLGVCDSITGECICQ 136
TG C C AG YG + + GC C C + G S CD++ G+CIC
Sbjct: 1201 --TG--CCLCPAGFYGRSC-EHGCPPGFYGLSCLHACACKN-GAS----CDAVMGQCICP 1250
Query: 137 DNTQGKNCER-CLPGYYGDPTDGGTCYYQCMARGMLTGP 174
G +CE+ C G +G+ C QC G P
Sbjct: 1251 SGYHGIHCEKGCASGRFGE-----RCQRQCDCGGAPCDP 1284
Score = 162 (62.1 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 50/148 (33%), Positives = 62/148 (41%)
Query: 37 KCIYG-YCKGPPDYSCQCELGWTGVDCSVNCLCNNHST-----CVHGIGICDE------C 84
KC+ G +C P +C C G+ G DCS C N + C G G CD C
Sbjct: 1062 KCMNGGHCD-PVSGTCDCAPGFIGADCSKTCPENRYGKDCALFCACGKGHCDPRTGSCTC 1120
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
G CQ C G +G + CR C C + G +CD + G C C GK
Sbjct: 1121 PPGQMGPGCQQVCPQGRFGPS-----CRLTCSCQN-G----AICDHVDGSCTCGLGWTGK 1170
Query: 143 NCER-CLPGYYGDPTDGGTCYYQCMARG 169
+CE+ CLPG YG P C C G
Sbjct: 1171 SCEKECLPGKYG-PNCSLDC--SCQHNG 1195
Score = 154 (59.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 42/130 (32%), Positives = 58/130 (44%)
Query: 32 SLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHS-TCVHGIGICDECH 85
+LC++ I G C PP ++ C+ C G G C +C CNN +C G C C
Sbjct: 679 ALCHH--ITGECTCPPGWTGHDCKHPCNSGRWGQHCENSCACNNSDGSCDPVTGSCF-CE 735
Query: 86 DWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
TG HC Q C GS+G + C C + G CD ++G C C G C
Sbjct: 736 PGFTGKHCEQRCPEGSFGPSCMHS----CQCQN-G----AACDHVSGACTCSAGWTGTFC 786
Query: 145 ERCLP-GYYG 153
+ P G++G
Sbjct: 787 RKACPEGFFG 796
Score = 153 (58.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 48/153 (31%), Positives = 57/153 (37%)
Query: 34 CYNKCIY-GYCK-GPPDYSCQCELGWTGVDCSVNC-------LCNNHSTCVHGI------ 78
C +CI G P CQC G TG C + C C C+H +
Sbjct: 885 CLQRCICPGQTACDPVTGKCQCSKGGTGTSCELACPPGFFGERCEEQCDCIHSVSCHPQT 944
Query: 79 GICDECHDWTTGDHCQY-CRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQ 136
G C W G HC C G YG GC R+C C + G C +TGEC C
Sbjct: 945 GACRCAKGWR-GRHCDKPCLPGHYGM-----GCARRCHCPA-GTP----CHHLTGECSCP 993
Query: 137 DNTQGKNCER-CLPGYYGDPTDGGTCYYQCMAR 168
G CE+ C P YG +C C R
Sbjct: 994 PGFTGHGCEKTCPPNTYGQ-----SCSQACRCR 1021
Score = 148 (57.2 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 43/133 (32%), Positives = 56/133 (42%)
Query: 33 LCYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDE 83
+C N C I G C PP C+ C G+ G +C+ C C N C G C
Sbjct: 413 MCQNGGSCDPITGLCHCPPGVQGPFCEDGCPRGFFGKNCNKPCNCANSGHCHRLYGAC-L 471
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDC-NSHGNSVLGVCDSITGECICQDNTQG 141
C G C C ++G +QE C C H LG C + G C C+ G
Sbjct: 472 CDPGLYGRFCHLTCPRWAFGVGCSQE----CQCVKEH---TLG-CSARNGTCSCKPGYHG 523
Query: 142 KNCER-CLPGYYG 153
K C++ C PG+YG
Sbjct: 524 KKCQKACTPGFYG 536
Score = 147 (56.8 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 43/136 (31%), Positives = 59/136 (43%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C P + SC+ C G+ G+ C C C N ++C +G C C G HC+
Sbjct: 1202 GCCLCPAGFYGRSCEHGCPPGFYGLSCLHACACKNGASCDAVMGQCI-CPSGYHGIHCEK 1260
Query: 96 -CRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYY 152
C +G +G E C R+CDC CD TG+C+C G C+ C Y
Sbjct: 1261 GCASGRFG-----ERCQRQCDCGG------APCDPATGKCLCPPGKTGDKCDIGCRSDQY 1309
Query: 153 GDPTDGGTCYYQCMAR 168
G P C QC ++
Sbjct: 1310 G-PDCSLRC--QCASK 1322
Score = 146 (56.5 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 45/144 (31%), Positives = 65/144 (45%)
Query: 30 NASLCYNKCIYGYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
NA C + + G C+ P + +C+ C+ G C+ C C+N + C H G C
Sbjct: 807 NAEGCDH--VLGTCRCLPGWRGETCEQPCQGDRFGQGCAHTCNCHNGALCDHITGTCACT 864
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
W G CQ C G +G GC ++C C G + CD +TG+C C G
Sbjct: 865 PGWG-GATCQEACPPGWHG-----AGCLQRCICP--GQTA---CDPVTGKCQCSKGGTGT 913
Query: 143 NCE-RCLPGYYGDPTDGGTCYYQC 165
+CE C PG++G+ C QC
Sbjct: 914 SCELACPPGFFGE-----RCEEQC 932
Score = 143 (55.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 45/143 (31%), Positives = 58/143 (40%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
CI+ P +C+C GW G C CL H +G+G CH G C +
Sbjct: 934 CIHSVSCHPQTGACRCAKGWRGRHCDKPCL-PGH----YGMGCARRCH-CPAGTPCHHLT 987
Query: 98 AG-SYGNATTQEGCRK-CDCNSHGNSVLGVC------DS--ITGECICQDNTQGKNCER- 146
S T GC K C N++G S C D ITG C+C+ G C+R
Sbjct: 988 GECSCPPGFTGHGCEKTCPPNTYGQSCSQACRCRAEEDCHPITGRCVCRLGYHGAQCDRR 1047
Query: 147 CLPGYYGDPTDGGTCYYQCMARG 169
C G YG +C +CM G
Sbjct: 1048 CPEGTYGSNCQK-SC--KCMNGG 1067
Score = 141 (54.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 38/117 (32%), Positives = 45/117 (38%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDE-CHDWTTGDHCQ 94
G C P Y CQ C G+ G C + C C+ C H G C C G+ C
Sbjct: 513 GTCSCKPGYHGKKCQKACTPGFYGAGCKLRCNCSTDVLCDHETGACKRPCPPGFHGEKCH 572
Query: 95 Y-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
C+ GS+G CR+ C C CD TG C C G CER P
Sbjct: 573 SSCQPGSFG-----VDCRQSCSCGG------APCDPETGRCFCPAGKTGAMCERGFP 618
Score = 128 (50.1 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 45/148 (30%), Positives = 61/148 (41%)
Query: 30 NASLCYNK---C--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIG 79
N+ C N C + G C P ++ C+ C G G C +C C N + C H G
Sbjct: 714 NSCACNNSDGSCDPVTGSCFCEPGFTGKHCEQRCPEGSFGPSCMHSCQCQNGAACDHVSG 773
Query: 80 ICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDC-NSHGNSVLGVCDSITGECICQD 137
C WT G C+ C G +G Q C+C N+ G CD + G C C
Sbjct: 774 ACTCSAGWT-GTFCRKACPEGFFGLDCHQV----CNCKNAEG------CDHVLGTCRCLP 822
Query: 138 NTQGKNCERCLPGYYGDPTDGGTCYYQC 165
+G+ CE+ P GD G C + C
Sbjct: 823 GWRGETCEQ--P-CQGDRFGQG-CAHTC 846
Score = 123 (48.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 37/135 (27%), Positives = 52/135 (38%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-------------LCNNHSTCVH 76
+ SL C+ G + C C GWTG+ C+ C +C N +C
Sbjct: 363 DCSLSCEDCMNGGRCNSENSGCVCSPGWTGIICNQTCAQGTYGDGCASICMCQNGGSCDP 422
Query: 77 GIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECI 134
G+C C G C+ C G +G + C K C+C NS G C + G C+
Sbjct: 423 ITGLC-HCPPGVQGPFCEDGCPRGFFG-----KNCNKPCNC---ANS--GHCHRLYGACL 471
Query: 135 CQDNTQGKNCERCLP 149
C G+ C P
Sbjct: 472 CDPGLYGRFCHLTCP 486
Score = 121 (47.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 52/170 (30%), Positives = 66/170 (38%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYC 96
C GY D +C G G +C +C C N C G CD C G C + C
Sbjct: 1035 CRLGYHGAQCDR--RCPEGTYGSNCQKSCKCMNGGHCDPVSGTCD-CAPGFIGADCSKTC 1091
Query: 97 RAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GYYGD 154
YG + C C C G CD TG C C G C++ P G +G
Sbjct: 1092 PENRYG-----KDCALFCACGK------GHCDPRTGSCTCPPGQMGPGCQQVCPQGRFG- 1139
Query: 155 PTDGGTCYYQCMAR-GMLTGPGPQGLG-SGLA-ERNAWEGKDTP--SREC 199
P+ TC Q A + G GLG +G + E+ GK P S +C
Sbjct: 1140 PSCRLTCSCQNGAICDHVDGSCTCGLGWTGKSCEKECLPGKYGPNCSLDC 1189
Score = 76 (31.8 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 18/55 (32%), Positives = 24/55 (43%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQE--------EICPNECHEFLNHGTCD 346
P C + C I +C CPP TG DC+ + C N C + G+CD
Sbjct: 672 PCSCSSDALCHHITGECTCPPGWTGHDCKHPCNSGRWGQHCENSCACNNSDGSCD 726
Score = 69 (29.3 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
CP C + +C CPP TG C E+ CP
Sbjct: 977 CPAGTPCHHLTGECSCPPGFTGHGC-EKTCP 1006
Score = 68 (29.0 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 316 CVCPPRRTGPDCQEEICP 333
C CPP + GP CQ+ +CP
Sbjct: 1118 CTCPPGQMGPGCQQ-VCP 1134
Score = 61 (26.5 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQE 329
+C C N +CVCP GP C+E
Sbjct: 1318 QCASKSQCNPYNGKCVCPATWMGPTCKE 1345
Score = 57 (25.1 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 17/55 (30%), Positives = 23/55 (41%)
Query: 276 SGVMTIHYKQGKPSEGFNATYQIFSCPDKCP-ENRTC--INNQCVCPPRRTGPDC 327
SG IH ++G S F C +C C +C+CPP +TG C
Sbjct: 1251 SGYHGIHCEKGCASGRFGER-----CQRQCDCGGAPCDPATGKCLCPPGKTGDKC 1300
Score = 55 (24.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 301 CPDKCPENRT---C--INNQCVCPPRRTGPDCQEEICP 333
C + C N + C + C C P TG C++ CP
Sbjct: 712 CENSCACNNSDGSCDPVTGSCFCEPGFTGKHCEQR-CP 748
Score = 54 (24.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 13/35 (37%), Positives = 13/35 (37%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNECH 337
C C I C C P G CQE CP H
Sbjct: 848 CHNGALCDHITGTCACTPGWGGATCQEA-CPPGWH 881
Score = 54 (24.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 14/46 (30%), Positives = 16/46 (34%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDL 347
CP T + CPP G C + C E CH C L
Sbjct: 992 CPPGFTGHGCEKTCPPNTYGQSCSQACRCRAEEDCHPITGRCVCRL 1037
Score = 54 (24.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 18/56 (32%), Positives = 22/56 (39%)
Query: 300 SCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEFL--NHGTCD 346
SC KC C ++ C C P G DC + CP +C F G CD
Sbjct: 1060 SC--KCMNGGHCDPVSGTCDCAPGFIGADCSKT-CPENRYGKDCALFCACGKGHCD 1112
Score = 53 (23.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE----CH---EFLNHGTCD 346
C C ++ C C TG C++E P + C ++GTCD
Sbjct: 1148 CQNGAICDHVDGSCTCGLGWTGKSCEKECLPGKYGPNCSLDCSCQHNGTCD 1198
Score = 53 (23.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 18/67 (26%), Positives = 22/67 (32%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHY 362
CP C + +C C TG C E CP CD + H + H
Sbjct: 891 CPGQTACDPVTGKCQCSKGGTGTSC-ELACPPGFFGERCEEQCDCI-------HSVSCHP 942
Query: 363 QVDLIRC 369
Q RC
Sbjct: 943 QTGACRC 949
Score = 51 (23.0 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C N TC C+CP G C E CP
Sbjct: 1191 CQHNGTCDRFTGCCLCPAGFYGRSC-EHGCP 1220
Score = 51 (23.0 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 284 KQGKPSEGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
+ G P GF + +C C +C + QC+CP G C++
Sbjct: 1216 EHGCPP-GFYGLSCLHACA--CKNGASCDAVMGQCICPSGYHGIHCEK 1260
Score = 49 (22.3 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNE--CHEFLNHGTC 345
+C + T + + CPP G C+E+ C + CH G C
Sbjct: 905 QCSKGGTGTSCELACPPGFFGERCEEQCDCIHSVSCHP--QTGAC 947
Score = 47 (21.6 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 17/59 (28%), Positives = 22/59 (37%)
Query: 300 SCPD--KCPENRTC--INNQCVCPPRRTGPDCQEEICP-----NECHEF---LNHGTCD 346
SC +C C I +CVC G C CP + C + +N G CD
Sbjct: 1013 SCSQACRCRAEEDCHPITGRCVCRLGYHGAQCDRR-CPEGTYGSNCQKSCKCMNGGHCD 1070
Score = 43 (20.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPN--ECHEFLNHGTC 345
CP +T C + GPDC C + +C+ + +G C
Sbjct: 1291 CPPGKTGDKCDIGCRSDQYGPDCSLRCQCASKSQCNPY--NGKC 1332
Score = 43 (20.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 20/71 (28%), Positives = 25/71 (35%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CPNE-CHEFLNHGTCDLLLTGVHITHG-RTLH 361
CP I+ + C R G CQ + C C C TG G R+
Sbjct: 1249 CPSGYHGIHCEKGCASGRFGERCQRQCDCGGAPCDPATGKCLCPPGKTGDKCDIGCRSDQ 1308
Query: 362 YQVDL-IRCTC 371
Y D +RC C
Sbjct: 1309 YGPDCSLRCQC 1319
Score = 42 (19.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 315 QCVCPPRRTGPDCQ 328
+C CP +TG C+
Sbjct: 601 RCFCPAGKTGAMCE 614
>UNIPROTKB|F1P4B9 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02005946
EMBL:AADN02005947 EMBL:AADN02005948 EMBL:AADN02005949
EMBL:AADN02005950 IPI:IPI00810572 Ensembl:ENSGALT00000018614
ArrayExpress:F1P4B9 Uniprot:F1P4B9
Length = 551
Score = 190 (71.9 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNA----TTQEGCRKCDCNSHGNSVLGV-----CDSI 129
G+CD C T G HCQ C+ G Y + + + C+ C C+ G++ L + CD
Sbjct: 290 GVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDACKPCSCHPLGSAALPLGPRTFCDPS 349
Query: 130 TGECICQDNTQGKNCERCLPGYYGDPTDG 158
TG+C C+ G C+RCLPGY+G T G
Sbjct: 350 TGDCPCKPGVAGPRCDRCLPGYWGFGTSG 378
Score = 130 (50.8 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 35/97 (36%), Positives = 49/97 (50%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ--EG-------CRKCDCNSHGNSV--- 122
VHG +C H+ T G HCQ+C A Y + Q +G C+ C CN H ++
Sbjct: 222 VHGKCMCK--HN-TAGPHCQHC-APLYNDRPWQAADGKTGAPRECQSCKCNGHADTCHFD 277
Query: 123 ----LGVCDSITGECI-CQDNTQGKNCERCLPGYYGD 154
L + G C CQ NT+G++C+RC PG+Y D
Sbjct: 278 MDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRD 314
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 38/128 (29%), Positives = 54/128 (42%)
Query: 48 DYSCQCELGWTGV--DCSVNCLCNNHS-TCVHGI-----------GICDECHDWTTGDHC 93
D Q G TG +C +C CN H+ TC + G+CD C T G HC
Sbjct: 246 DRPWQAADGKTGAPRECQ-SCKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHC 304
Query: 94 QYCRAGSYGNA----TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
Q C+ G Y + + + C+ C C+ G++ L + C +T G +C C P
Sbjct: 305 QRCKPGFYRDLRKPFSAPDACKPCSCHPLGSAAL----PLGPRTFCDPST-G-DCP-CKP 357
Query: 150 GYYGDPTD 157
G G D
Sbjct: 358 GVAGPRCD 365
Score = 37 (18.1 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 6/12 (50%), Positives = 6/12 (50%)
Query: 316 CVCPPRRTGPDC 327
C C P GP C
Sbjct: 353 CPCKPGVAGPRC 364
>UNIPROTKB|F1NZZ2 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IEA] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007229 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0090002 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:LRHTTGP GO:GO:0043259 EMBL:AADN02019242
EMBL:AADN02019240 EMBL:AADN02019241 IPI:IPI00578246
Ensembl:ENSGALT00000008535 Uniprot:F1NZZ2
Length = 3668
Score = 210 (79.0 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 57/155 (36%), Positives = 72/155 (46%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQ-CELGW----TGV---DCSVNCLCNNHST-CVHGIGI 80
N LC+ C Y G SCQ C G+ G+ C + C CN HS C+ G GI
Sbjct: 1804 NVELCF--CPANYL-GD---SCQECAPGYYRDTKGLFLGKC-IPCHCNGHSDQCLPGSGI 1856
Query: 81 CDECHDWTTGDHCQYCRAGSYG--NATTQEGCRKCDCN---SHGNSVLG-VCDSITGECI 134
C C T GDHC+ C+ G G NA C C C + N +G V + +C+
Sbjct: 1857 CLNCQHNTEGDHCEQCKDGYVGSRNADGSLQCVGCPCPLSVASNNFAIGCVHKGSSTQCL 1916
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
C+ G NCERC PGYYG+P G+ C G
Sbjct: 1917 CKPGYAGPNCERCAPGYYGNPLVIGSSCQPCDCSG 1951
Score = 180 (68.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 39/118 (33%), Positives = 53/118 (44%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNN-HSTCVHGIGICDECHDWTTGDHCQY 95
+C GY P C+ DCS N N S+C G C C T G C+
Sbjct: 1928 RCAPGYYGNPLVIGSSCQ----PCDCSGNTDPNMLFSSCDSLTGTCMGCMHHTAGVRCEV 1983
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C G YG+A + C +C+C+ G C TG+C C+ G++C+ C GYYG
Sbjct: 1984 CAPGFYGDAVAAKNCTQCNCSPCGTDS---CHPQTGQCFCKAGVTGQHCDHCEEGYYG 2038
Score = 178 (67.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/153 (32%), Positives = 72/153 (47%)
Query: 32 SLCYNKC--IYGYCKGPPDYSC--QCEL---GWTG-VDCSVNCL-CN----NHSTCVHGI 78
++ ++ C + G C G ++ +CE+ G+ G + NC CN +C
Sbjct: 1956 NMLFSSCDSLTGTCMGCMHHTAGVRCEVCAPGFYGDAVAAKNCTQCNCSPCGTDSCHPQT 2015
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN--SHGNSVLGVCDSITGECICQ 136
G C C TG HC +C G YG GCR+CDC+ + G+S C + TG+C C
Sbjct: 2016 GQCF-CKAGVTGQHCDHCEEGYYGFEGCS-GCRRCDCDVGAMGSS----CHAQTGQCHCL 2069
Query: 137 DNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
G C++C PGY+G G C +C RG
Sbjct: 2070 PGVSGSRCQQCAPGYWGFSERG--CR-KCECRG 2099
Score = 171 (65.3 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 46/143 (32%), Positives = 61/143 (42%)
Query: 17 ALSRCTVLLLYIFNASLCYNKCIYGYCK-GPPDYSCQ-CELGWTGVD-CSV--NCLCN-- 69
A CT C+ + +CK G C CE G+ G + CS C C+
Sbjct: 1994 AAKNCTQCNCSPCGTDSCHPQTGQCFCKAGVTGQHCDHCEEGYYGFEGCSGCRRCDCDVG 2053
Query: 70 -NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
S+C G C C +G CQ C G +G ++ GCRKC+C G CD
Sbjct: 2054 AMGSSCHAQTGQC-HCLPGVSGSRCQQCAPGYWG--FSERGCRKCECRG------GSCDP 2104
Query: 129 ITGECICQDNTQGKNCERCLPGY 151
TGEC C + GK C+ C+ Y
Sbjct: 2105 RTGECTCSNGLTGKQCDVCMHNY 2127
Score = 166 (63.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 54/171 (31%), Positives = 67/171 (39%)
Query: 15 DDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQC-ELGWTGVDCS-----VNCLC 68
+D RC Y C N C GY P Y TG +NC C
Sbjct: 423 EDLTGRCYCKPNY--TGEHC-NACAEGYLDFPHCYPVPAFAYNDTGEQVLPAGQIINCDC 479
Query: 69 NNHST----CVHG--IGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV 122
T C +G+C C G HC C G YG C+ C C+ G
Sbjct: 480 YAGGTEGNACRKDPRVGMC-VCKPNFQGTHCDQCTPGHYGPL-----CQPCQCSGPGQYD 533
Query: 123 LGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
G CDS TG+C+C+ +G+ C+RC PGY+ P C C A G L G
Sbjct: 534 -GTCDSETGQCLCRTGFEGQLCDRCAPGYFNYPLCQ-LC--GCSAVGTLPG 580
Score = 157 (60.3 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 39/126 (30%), Positives = 53/126 (42%)
Query: 42 YCKGP-PDYSC-QCELGWTGVDCSVNCLCNNHSTCVHGI---GICDECHDWTTGDHCQYC 96
+CK C QC G C C++ + G C CH TG C C
Sbjct: 589 FCKAEFAGPRCEQCSSGHHSYPHCYACSCDSRGAVDNNCSPAGQC-RCHVNFTGHTCNQC 647
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP- 155
G YG + C C C+ G S+ C+ TG+C C+ G C+ C+PG YG P
Sbjct: 648 ALGFYGYPS----CTPCQCSREG-SLHSTCNQETGQCSCRPKVTGLRCDSCVPGAYGFPH 702
Query: 156 TDGGTC 161
+ G+C
Sbjct: 703 CEVGSC 708
Score = 156 (60.0 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 39/135 (28%), Positives = 61/135 (45%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHCQY 95
+C+ C+ P + C +G +CS + C G C +C G C
Sbjct: 1489 ECVV--CE-PQTFGCHPLIGCEDCNCSQPGVQELTELGCDVDSGQC-KCKPNVIGRRCDL 1544
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-D 154
C G Y + CR+CDC+ G V VCD +TG+C C++N +G C++C G + D
Sbjct: 1545 CAPGYYHYPS----CRRCDCHPDGTEV-SVCDPVTGQCHCKENVEGPRCDQCRLGTFSLD 1599
Query: 155 PTDGGTCYYQCMARG 169
++ C +C G
Sbjct: 1600 ASNPKGCT-KCFCFG 1613
Score = 148 (57.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 48/169 (28%), Positives = 69/169 (40%)
Query: 5 FRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKG----PPDYSCQCELGWTGV 60
F I+ T+++ S ++ L Y A C +C +G P C C+ G
Sbjct: 1390 FYINPSTSSRFCRDSAISLSLFYNNGAQPC--QCHEAGARGSQCEPFGGQCPCKSNVIGR 1447
Query: 61 DCSVNCLCN-----NHSTCVHGIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEG 109
+CS C N C G +CDE C T C C ++G G
Sbjct: 1448 ECS-RCATGYWGFPNCRPCDCGTRLCDEVTGQCICPPHTLKPECVVCEPQTFG-CHPLIG 1505
Query: 110 CRKCDCNSHGNSVLGV--CDSITGECICQDNTQGKNCERCLPGYYGDPT 156
C C+C+ G L CD +G+C C+ N G+ C+ C PGYY P+
Sbjct: 1506 CEDCNCSQPGVQELTELGCDVDSGQCKCKPNVIGRRCDLCAPGYYHYPS 1554
Score = 147 (56.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 34/116 (29%), Positives = 49/116 (42%)
Query: 51 CQ-CELGWTGVDCSVNCLCNNHSTC------VHGIGICDECHDWTTGDHCQYCRAGSYGN 103
CQ C DC + + H G G+C +C TTG +C+ C G Y +
Sbjct: 338 CQPCNCNGHAYDCYYDPEVDRHKASKSREDKFEGGGVCIDCQHHTTGVNCERCIPGYYRS 397
Query: 104 AT----TQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
+ C +C+C S G C+ +TG C C+ N G++C C GY P
Sbjct: 398 PDHPIDSPYICYRCNCKSDFTD--GTCEDLTGRCYCKPNYTGEHCNACAEGYLDFP 451
Score = 134 (52.2 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 44/138 (31%), Positives = 58/138 (42%)
Query: 41 GYCKGPPDYS---C-QCELGWTGVDCSVNCLCNN----HSTCVHGIGICDECHDWTTGDH 92
G C P++ C QC G G C C C+ TC G C C G
Sbjct: 496 GMCVCKPNFQGTHCDQCTPGHYGPLCQP-CQCSGPGQYDGTCDSETGQC-LCRTGFEGQL 553
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C C G Y N C+ C C++ G ++ G CDS +G C C+ G CE+C G++
Sbjct: 554 CDRCAPG-YFNYPL---CQLCGCSAVG-TLPGGCDS-SGRCFCKAEFAGPRCEQCSSGHH 607
Query: 153 GDPTDGGTCYY-QCMARG 169
P CY C +RG
Sbjct: 608 SYPH----CYACSCDSRG 621
Score = 133 (51.9 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 40/146 (27%), Positives = 60/146 (41%)
Query: 8 SGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL 67
+GL TA D +L+ + C ++C Y PD C T C
Sbjct: 711 AGLVTA-DPSLAPGSCACRAYVEGPAC-DRCKPLYWNLTPDNPYGC----TSCKCETKGT 764
Query: 68 CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE-GCRKCDCNSHGNSVLGVC 126
+ + C G G C C T G C C+ G + T GC+ C C+ G S+ C
Sbjct: 765 ISGIAECQQGNGQCF-CKPNTCGQFCSACKDGYFSMENTNYFGCQGCRCDV-GGSLGPSC 822
Query: 127 DSITGECICQDNTQGKNCERCLPGYY 152
+ +G C C+ NT+G C + + +Y
Sbjct: 823 EERSGACRCRQNTRGPTCTQPVRDHY 848
Score = 81 (33.6 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 24/80 (30%), Positives = 35/80 (43%)
Query: 300 SC-PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNE---CHEFLNHGTCDLLLTGVH 353
+C P C R C + QC+CPP P+C +C + CH + C+ GV
Sbjct: 1461 NCRPCDCG-TRLCDEVTGQCICPPHTLKPECV--VCEPQTFGCHPLIGCEDCNCSQPGVQ 1517
Query: 354 -ITHGRTLHYQVDLIRCTCR 372
+T L VD +C C+
Sbjct: 1518 ELTE---LGCDVDSGQCKCK 1534
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 313 NNQCVCPPRRTGPDCQ 328
+ QC+C P GP+C+
Sbjct: 1912 STQCLCKPGYAGPNCE 1927
Score = 44 (20.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHIT 355
+ QC C P G C ++C + + + CD G ++
Sbjct: 1528 SGQCKCKPNVIGRRC--DLCAPGYYHYPSCRRCDCHPDGTEVS 1568
Score = 44 (20.5 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 7/14 (50%), Positives = 7/14 (50%)
Query: 316 CVCPPRRTGPDCQE 329
C CP G CQE
Sbjct: 1808 CFCPANYLGDSCQE 1821
Score = 43 (20.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+ +C C GP C++ C + H + + C
Sbjct: 585 SGRCFCKAEFAGPRCEQ--CSSGHHSYPHCYAC 615
Score = 43 (20.2 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 313 NNQCVCPPRRTGPDC 327
N QC C P G C
Sbjct: 775 NGQCFCKPNTCGQFC 789
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 300 SC-PDKCPE----NRTCINN--QCVCPPRRTGPDC 327
SC P +C + TC QC C P+ TG C
Sbjct: 656 SCTPCQCSREGSLHSTCNQETGQCSCRPKVTGLRC 690
Score = 42 (19.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNH-GTCD 346
C P GP CQ P +C + GTCD
Sbjct: 512 CTPGHYGPLCQ----PCQCSGPGQYDGTCD 537
Score = 39 (18.8 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 315 QCVCPPRRTGPDCQE 329
QC C P +G CQ+
Sbjct: 2065 QCHCLPGVSGSRCQQ 2079
Score = 39 (18.8 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 13/50 (26%), Positives = 17/50 (34%)
Query: 327 CQEEICPNE-CHEFLNHGTCDLLLTGVHITHGRTLHYQVD----LIRCTC 371
C C + CH C +TG H H +Y + RC C
Sbjct: 2001 CNCSPCGTDSCHPQTGQCFCKAGVTGQHCDHCEEGYYGFEGCSGCRRCDC 2050
Score = 39 (18.8 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 6/18 (33%), Positives = 8/18 (44%)
Query: 312 INNQCVCPPRRTGPDCQE 329
+ QC C GP C +
Sbjct: 1573 VTGQCHCKENVEGPRCDQ 1590
Score = 38 (18.4 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 307 ENRTCINNQ-CVCPPRRT-GPDCQEEICPNECHEFLNHGTC 345
EN Q C C + GP C+E C + TC
Sbjct: 800 ENTNYFGCQGCRCDVGGSLGPSCEERSGACRCRQNTRGPTC 840
>UNIPROTKB|Q9Y6N6 [details] [associations]
symbol:LAMC3 "Laminin subunit gamma-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0000904
"cell morphogenesis involved in differentiation" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0016020 "membrane" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS]
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0016020
GO:GO:0005198 GO:GO:0007601 GO:GO:0005578 GO:GO:0007155
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 eggNOG:NOG235720 HOGENOM:HOG000019301
HOVERGEN:HBG100808 EMBL:AF041835 EMBL:AL583807 EMBL:AL355872
EMBL:AB208887 IPI:IPI00914899 RefSeq:NP_006050.3 UniGene:Hs.201805
ProteinModelPortal:Q9Y6N6 SMR:Q9Y6N6 IntAct:Q9Y6N6
MINT:MINT-7034525 STRING:Q9Y6N6 DMDM:308153586 PaxDb:Q9Y6N6
PRIDE:Q9Y6N6 DNASU:10319 Ensembl:ENST00000361069 GeneID:10319
KEGG:hsa:10319 UCSC:uc004caa.1 CTD:10319 GeneCards:GC09P133884
H-InvDB:HIX0008477 HGNC:HGNC:6494 MIM:604349 MIM:614115
neXtProt:NX_Q9Y6N6 Orphanet:280640 PharmGKB:PA30282 KO:K06247
OrthoDB:EOG498TZW ChiTaRS:LAMC3 GenomeRNAi:10319 NextBio:39119
ArrayExpress:Q9Y6N6 Bgee:Q9Y6N6 CleanEx:HS_LAMC3
Genevestigator:Q9Y6N6 GermOnline:ENSG00000050555 Uniprot:Q9Y6N6
Length = 1575
Score = 183 (69.5 bits), Expect = 7.3e-11, Sum P(3) = 7.3e-11
Identities = 38/104 (36%), Positives = 52/104 (50%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNSH 118
CS N N C G C C TTGDHC++C+ G YG+A + C C C+
Sbjct: 812 CSGNVDPNAVGNCDPLSGHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQ 871
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G+ S CD +TG+C C + ++C RC PG++ D G C
Sbjct: 872 GSVSEQMPCDPVTGQCSCLPHVTARDCSRCYPGFF-DLQPGRGC 914
Score = 175 (66.7 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 36/85 (42%), Positives = 44/85 (51%)
Query: 78 IGICDECHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGEC 133
+ IC C TG C+ C G Y Q G C C CN HG CD TG C
Sbjct: 670 VEICS-CPTGYTGQFCESCAPG-YKREMPQGGPYASCVPCTCNQHGT-----CDPNTGIC 722
Query: 134 ICQDNTQGKNCERCLPGYYGDPTDG 158
+C +T+G +CERCLPG+YG+P G
Sbjct: 723 VCSHHTEGPSCERCLPGFYGNPFAG 747
Score = 174 (66.3 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 38/102 (37%), Positives = 51/102 (50%)
Query: 76 HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECIC 135
HG G C C D T G HC+ C+ Y + + C+ CDC S G+ L CD TG C C
Sbjct: 348 HG-GRCHHCRDHTAGPHCERCQENFY-HWDPRMPCQPCDCQSAGSLHLQ-CDD-TGTCAC 403
Query: 136 QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQ 177
+ G C+RCLPG++ ++GG C G L P+
Sbjct: 404 KPTVTGWKCDRCLPGFHS-LSEGGCRPCTCNPAGSLDTCDPR 444
Score = 171 (65.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 39/118 (33%), Positives = 53/118 (44%)
Query: 42 YCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
+C+ P Y + G C V C CN H TC GIC C T G C+ C G
Sbjct: 683 FCESCAPGYKREMPQGGPYASC-VPCTCNQHGTCDPNTGIC-VCSHHTEGPSCERCLPGF 740
Query: 101 YGN--ATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
YGN A + C+ C C ++ + +S C C +G+ CE C G++GDP
Sbjct: 741 YGNPFAGQADDCQPCPCPGQ-SACTTIPESREVVCTHCPPGQRGRRCEVCDDGFFGDP 797
Score = 158 (60.7 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 40/135 (29%), Positives = 59/135 (43%)
Query: 37 KCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
+C + P CQ C+ G S++ C++ TC C TG C
Sbjct: 366 RCQENFYHWDPRMPCQPCDCQSAG---SLHLQCDDTGTCA--------CKPTVTGWKCDR 414
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-D 154
C G + + ++ GCR C CN G+ L CD +G C C++N +G C+RC PG +
Sbjct: 415 CLPGFH--SLSEGGCRPCTCNPAGS--LDTCDPRSGRCPCKENVEGNLCDRCRPGTFNLQ 470
Query: 155 PTDGGTCYYQCMARG 169
P + C C G
Sbjct: 471 PHNPAGCS-SCFCYG 484
Score = 136 (52.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 47/183 (25%), Positives = 72/183 (39%)
Query: 15 DDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC 74
D +C+ L ++ A C ++C G+ P C+ C + L + C
Sbjct: 881 DPVTGQCSCLP-HV-TARDC-SRCYPGFFDLQPGRGCR--------SCKCHPLGSQEDQC 929
Query: 75 VHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
G C C TG C C+ G +G + +GCR C C+ G + C G C+
Sbjct: 930 HPKTGQCT-CRPGVTGQACDRCQLGFFGFSI--KGCRACRCSPLG-AASAQCHE-NGTCV 984
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAW-EGKD 193
C+ +G C+RC ++ DG C QC + L L + L W +G D
Sbjct: 985 CRPGFEGYKCDRCHDNFFLT-ADGTHCQ-QCPSCYALVKEEAAKLKARLTLTEGWLQGSD 1042
Query: 194 TPS 196
S
Sbjct: 1043 CGS 1045
Score = 111 (44.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 38/114 (33%), Positives = 46/114 (40%)
Query: 61 DCSVN--CLCNNH-STC---VHGIGICDECHDWTTGDHCQYC------RAGSYGNATTQE 108
D SV C CN H S C V G C C TTG C+ C R + G A
Sbjct: 264 DFSVGGRCKCNGHASECGPDVAGQLAC-RCQHNTTGTDCERCLPFFQDRPWARGTAEAAH 322
Query: 109 GCRKCDCNSHGNSV-----LGVCDSITGECI-CQDNTQGKNCERCLPGYYG-DP 155
C C+C+ L G C C+D+T G +CERC +Y DP
Sbjct: 323 ECLPCNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDP 376
Score = 61 (26.5 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 283 YKQGKPSEGFNATYQIFSC-PDKCPENRTCINNQ--CVCPPRRTGPDCQ 328
YK+ P G A SC P C ++ TC N CVC GP C+
Sbjct: 691 YKREMPQGGPYA-----SCVPCTCNQHGTCDPNTGICVCSHHTEGPSCE 734
Score = 52 (23.4 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 21/76 (27%), Positives = 30/76 (39%)
Query: 3 IIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCK--------GPP---DYSC 51
++ + L T DD VL Y + S + + G CK GP +C
Sbjct: 234 LLISLDRLNTFGDDIFKDPKVLQSYYYAVS---DFSVGGRCKCNGHASECGPDVAGQLAC 290
Query: 52 QCELGWTGVDCSVNCL 67
+C+ TG DC CL
Sbjct: 291 RCQHNTTGTDCE-RCL 305
Score = 50 (22.7 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 286 GKPSEGFNATYQIFSCPDK--C---PENRTCINNQCV-CPPRRTGPDCQEEIC 332
G P G Q CP + C PE+R + C CPP + G C E+C
Sbjct: 742 GNPFAGQADDCQPCPCPGQSACTTIPESREVV---CTHCPPGQRGRRC--EVC 789
Score = 44 (20.5 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 307 ENRTC--INNQCVCPPRRTGPDC 327
E C + QC C P T DC
Sbjct: 876 EQMPCDPVTGQCSCLPHVTARDC 898
Score = 40 (19.1 bits), Expect = 7.3e-11, Sum P(3) = 7.3e-11
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 315 QCVCPPRRTGPDC 327
QC C P TG C
Sbjct: 935 QCTCRPGVTGQAC 947
Score = 38 (18.4 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHE 338
N CVC P G C + CH+
Sbjct: 980 NGTCVCRPGFEGYKC------DRCHD 999
Score = 37 (18.1 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 10/28 (35%), Positives = 10/28 (35%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHG 343
C CP TG C E P E G
Sbjct: 673 CSCPTGYTGQFC-ESCAPGYKREMPQGG 699
>MGI|MGI:1920432 [details] [associations]
symbol:Pear1 "platelet endothelial aggregation receptor 1"
species:10090 "Mus musculus" [GO:0001891 "phagocytic cup"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043654 "recognition of apoptotic cell" evidence=IMP;IDA]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 MGI:MGI:1920432 GO:GO:0016021
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 HOGENOM:HOG000294130
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 HSSP:P01132
HOVERGEN:HBG108333 CTD:375033 eggNOG:NOG320509 OMA:PPGTWGF
OrthoDB:EOG451DPW EMBL:AF461685 EMBL:AF444274 EMBL:AF440279
EMBL:AK141082 EMBL:AK053551 EMBL:BC042490 EMBL:AK131151
IPI:IPI00283616 IPI:IPI00874618 IPI:IPI00874792 IPI:IPI00874938
RefSeq:NP_001027585.1 RefSeq:NP_001027586.1 RefSeq:NP_082736.1
RefSeq:NP_690012.2 UniGene:Mm.158962 ProteinModelPortal:Q8VIK5
SMR:Q8VIK5 STRING:Q8VIK5 PhosphoSite:Q8VIK5 PaxDb:Q8VIK5
PRIDE:Q8VIK5 Ensembl:ENSMUST00000029714 Ensembl:ENSMUST00000079083
Ensembl:ENSMUST00000090981 Ensembl:ENSMUST00000172621
Ensembl:ENSMUST00000174759 GeneID:73182 KEGG:mmu:73182
UCSC:uc008psq.1 UCSC:uc008psu.1 InParanoid:Q8VIK5 ChiTaRS:PEAR1
NextBio:337625 Bgee:Q8VIK5 CleanEx:MM_PEAR1 Genevestigator:Q8VIK5
Uniprot:Q8VIK5
Length = 1034
Score = 169 (64.5 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 49/153 (32%), Positives = 66/153 (43%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
C G+ +G + S C LG G +C+ +C C + C G C W G HCQ C
Sbjct: 466 CKEGWQRG--NCSVPCPLGTWGFNCNASCQCAHDGVCSPQTGACTCTPGWH-GAHCQLPC 522
Query: 97 RAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG- 153
G +G EGC CDC+ H + CD + G+C CQ G C C G++G
Sbjct: 523 PKGQFG-----EGCASVCDCD-HSDG----CDPVHGQCRCQAGWMGTRCHLPCPEGFWGA 572
Query: 154 --DPT----DGGTCYYQ---CMARGMLTGPGPQ 177
T +GGTC + C+ GP Q
Sbjct: 573 NCSNTCTCKNGGTCVSENGNCVCAPGFRGPSCQ 605
Score = 167 (63.8 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 53/157 (33%), Positives = 64/157 (40%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------------CNNHSTCVHGIG 79
LC +C++G C P CQC GW G DCS C C N+S+C G
Sbjct: 102 LCAQECVHGRCVAPNQ--CQCAPGWRGGDCSSECAPGMWGPQCDKFCHCGNNSSCDPKSG 159
Query: 80 ICDECHDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
C C +C Q C AG YG A C+ DC +G S CD G C C
Sbjct: 160 TCF-CPSGLQPPNCLQPCPAGHYGPA-----CQ-FDCQCYGAS----CDPQDGACFCPPG 208
Query: 139 TQGKNCERCLPGYYGDPTDGGTC--YYQCMARGMLTG 173
G +C +P G TDG C Y C G+ G
Sbjct: 209 RAGPSCN--VPCSQG--TDGFFCPRTYPCQNGGVPQG 241
Score = 164 (62.8 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 50/153 (32%), Positives = 64/153 (41%)
Query: 39 IYGYCK---GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
++G C+ G C C G+ G +CS C C N TCV G C C G C
Sbjct: 546 VHGQCRCQAGWMGTRCHLPCPEGFWGANCSNTCTCKNGGTCVSENGNC-VCAPGFRGPSC 604
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLPGY 151
Q C G YG C +C CN++ +S C G C C G +C E C PG+
Sbjct: 605 QRPCPPGRYGKR-----CVQCKCNNNHSS----CHPSDGTCSCLAGWTGPDCSEACPPGH 655
Query: 152 YGDPTD-------GGTCYYQ---CMARGMLTGP 174
+G GGTC+ Q C+ TGP
Sbjct: 656 WGLKCSQLCQCHHGGTCHPQDGSCICTPGWTGP 688
Score = 152 (58.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 48/144 (33%), Positives = 56/144 (38%)
Query: 30 NASLCYNKCIYGYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N LC G C P Y CQ C +G G DC+ C C + C G C C
Sbjct: 278 NGGLCDR--FTGQCHCAPGYIGDRCQEECPVGRFGQDCAETCDCAPGARCFPANGAC-LC 334
Query: 85 HDWTTGDHC--QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
TGD C + C G YG + QE C CD H S C + GEC CQ G
Sbjct: 335 EHGFTGDRCTERLCPDGRYG-LSCQEPCT-CD-PEHSLS----CHPMHGECSCQPGWAGL 387
Query: 143 NCERCLPGYYGDPTDGGTCYYQCM 166
+C P T G C C+
Sbjct: 388 HCNESCP----QDTHGPGCQEHCL 407
Score = 148 (57.2 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 44/141 (31%), Positives = 62/141 (43%)
Query: 46 PPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGIC--DE----CHDWTTGDH 92
P C C+ GW G+ C+ +C C H C+HG G+C D C TG H
Sbjct: 373 PMHGECSCQPGWAGLHCNESCPQDTHGPGCQEHCLCLHG-GLCLADSGLCRCAPGYTGPH 431
Query: 93 C-QYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLP 149
C C +YG N ++ +C C N++ C I G CIC++ Q NC C
Sbjct: 432 CANLCPPDTYGINCSS-----RCSCE---NAI--ACSPIDGTCICKEGWQRGNCSVPCPL 481
Query: 150 GYYGDPTDGGTCYYQCMARGM 170
G +G + +C QC G+
Sbjct: 482 GTWGFNCNA-SC--QCAHDGV 499
Score = 140 (54.3 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 41/120 (34%), Positives = 49/120 (40%)
Query: 50 SCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICD----ECH--DWTTGDHCQY- 95
SC C GW GV CS+ C C C +G G+CD +CH GD CQ
Sbjct: 245 SCSCPPGWMGVICSLPCPEGFHGPNCTQECRCHNG-GLCDRFTGQCHCAPGYIGDRCQEE 303
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLP-GYYG 153
C G +G Q+ CDC C G C+C+ G C ER P G YG
Sbjct: 304 CPVGRFG----QDCAETCDCAPGAR-----CFPANGACLCEHGFTGDRCTERLCPDGRYG 354
Score = 134 (52.2 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 41/133 (30%), Positives = 57/133 (42%)
Query: 26 LYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC--VHGIGICDE 83
L + ++ LC +C GY GP + C G++CS C C N C + G IC E
Sbjct: 413 LCLADSGLC--RCAPGYT-GPHCANL-CPPDTYGINCSSRCSCENAIACSPIDGTCICKE 468
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
W G+ C G++G C C C +H GVC TG C C G
Sbjct: 469 --GWQRGNCSVPCPLGTWGF-----NCNASCQC-AHD----GVCSPQTGACTCTPGWHGA 516
Query: 143 NCER-CLPGYYGD 154
+C+ C G +G+
Sbjct: 517 HCQLPCPKGQFGE 529
Score = 74 (31.1 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 18/46 (39%), Positives = 20/46 (43%)
Query: 290 EGFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
EGF +C C TC+ N CVC P GP CQ CP
Sbjct: 567 EGFWGANCSNTCT--CKNGGTCVSENGNCVCAPGFRGPSCQRP-CP 609
Score = 65 (27.9 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 304 KCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
+C TC + C+C P TGP+C E CP
Sbjct: 665 QCHHGGTCHPQDGSCICTPGWTGPNCLEG-CP 695
Score = 65 (27.9 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 17/46 (36%), Positives = 19/46 (41%)
Query: 290 EGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
EGF+ C +C C QC C P G CQEE CP
Sbjct: 263 EGFHGPNCTQEC--RCHNGGLCDRFTGQCHCAPGYIGDRCQEE-CP 305
Score = 64 (27.6 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 300 SCPDKC---PENR-TC--INNQCVCPPRRTGPDCQEEICPNECH 337
SC + C PE+ +C ++ +C C P G C E CP + H
Sbjct: 356 SCQEPCTCDPEHSLSCHPMHGECSCQPGWAGLHCNES-CPQDTH 398
Score = 63 (27.2 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 26/70 (37%), Positives = 28/70 (40%)
Query: 304 KCPENRT-C--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTL 360
KC N + C + C C TGPDC E CP H L C L H HG T
Sbjct: 621 KCNNNHSSCHPSDGTCSCLAGWTGPDCSEA-CPPG-HWGLK---CSQLCQ-CH--HGGTC 672
Query: 361 HYQVDLIRCT 370
H Q CT
Sbjct: 673 HPQDGSCICT 682
Score = 61 (26.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 19/58 (32%), Positives = 22/58 (37%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHG 357
SC CP + CP GP+C +E C CH N G CD H G
Sbjct: 245 SC--SCPPGWMGVICSLPCPEGFHGPNCTQE-C--RCH---NGGLCDRFTGQCHCAPG 294
Score = 59 (25.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 305 CPENRTCI--NNQCVCPPRRTGPDCQEEICPN 334
C C N C+C TG C E +CP+
Sbjct: 319 CAPGARCFPANGACLCEHGFTGDRCTERLCPD 350
Score = 56 (24.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 316 CVCPPRRTGPDCQ 328
CVCPP +G DC+
Sbjct: 722 CVCPPGHSGADCK 734
Score = 54 (24.1 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 305 CPENRTCINNQ--CVCPPRRTGPDCQEEICPNECH 337
C C+ + C C P TGP C +CP + +
Sbjct: 408 CLHGGLCLADSGLCRCAPGYTGPHCAN-LCPPDTY 441
Score = 53 (23.7 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 19/57 (33%), Positives = 24/57 (42%)
Query: 304 KC-PENRTCI------NNQC---VCPPRRTGPDCQEEI-CPNE----CHEFLNHGTC 345
+C P N C+ ++C +CP R G CQE C E CH HG C
Sbjct: 324 RCFPANGACLCEHGFTGDRCTERLCPDGRYGLSCQEPCTCDPEHSLSCHPM--HGEC 378
Score = 46 (21.3 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 15/45 (33%), Positives = 17/45 (37%)
Query: 291 GFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
GFN SC +C + C C C P G CQ CP
Sbjct: 485 GFNCNA---SC--QCAHDGVCSPQTGACTCTPGWHGAHCQLP-CP 523
Score = 45 (20.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNH--GTC 345
CPPR G +C + +C + E + G C
Sbjct: 694 CPPRMFGVNCSQ-LCQCDLGEMCHPETGAC 722
Score = 43 (20.2 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 318 CPPRRTGPDCQEE-IC 332
CP GP CQE +C
Sbjct: 393 CPQDTHGPGCQEHCLC 408
>UNIPROTKB|E1BSB8 [details] [associations]
symbol:E1BSB8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0050793 "regulation of
developmental process" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0016021 GO:GO:0007275
GO:GO:0030154 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.10.100.10
InterPro:IPR016186 GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
Pfam:PF12661 GeneTree:ENSGT00700000104305 SUPFAM:SSF90193
InterPro:IPR024600 Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985
EMBL:AADN02033880 EMBL:AADN02033881 EMBL:AADN02033882
IPI:IPI00818583 ProteinModelPortal:E1BSB8
Ensembl:ENSGALT00000039986 ArrayExpress:E1BSB8 Uniprot:E1BSB8
Length = 2434
Score = 152 (58.6 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 54/153 (35%), Positives = 61/153 (39%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KCI P Y CQC G+TGV C N + C HG EC D
Sbjct: 514 CLNGAKCI----DHPNGYECQCATGFTGVLCEENINNCDPDPCHHG-----ECQDGIDSY 564
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVL--GVC-DSITG-ECICQDNTQGKNCER- 146
C C G Y A E +C H N L G C D + G +C C T G NCE
Sbjct: 565 TC-ICNPG-YMGAICSEQINEC----HSNPCLHQGRCIDLVNGYQCNCLPGTSGVNCENN 618
Query: 147 ---CL--PGYYGDPTDGGTCYYQCMARGMLTGP 174
C P +GD DG Y C + TGP
Sbjct: 619 FDDCASNPCVHGDCIDGIN-RYNCACKPGFTGP 650
Score = 142 (55.0 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 44/150 (29%), Positives = 64/150 (42%)
Query: 41 GYCKGPPD---YSCQCELGWTGVDCSVN---CL---CNNHSTC--VHGIGICDECHDWTT 89
G C+ PD Y+CQC GW G C+V+ CL C NH+ C + G +C EC T
Sbjct: 818 GICQESPDSEGYTCQCAPGWEGERCTVDIDECLSKPCKNHALCHNIQGSYLC-ECRPGFT 876
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
G C + + C C + + V G+ +S + CIC G C+
Sbjct: 877 GGDCD----------SNIDDCLSNPCQNGASCVDGI-NSFS--CICLPGFHGDKCQTDTN 923
Query: 150 GYYGDPT-DGGTCYYQCMARGMLTGPGPQG 178
+P +GGTC + + PG +G
Sbjct: 924 ECLSEPCRNGGTCTHYVNSYTCKCQPGFEG 953
Score = 133 (51.9 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 39/130 (30%), Positives = 53/130 (40%)
Query: 36 NKCIYGYC-KGPPDYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGI-GICDECHDW 87
N C++G C G Y+C C+ G+TG C+V+ C CNN TC++ + G C +
Sbjct: 625 NPCVHGDCIDGINRYNCACKPGFTGPRCNVDIDECASSPCNNGGTCINEVNGFRCVCPEG 684
Query: 88 TTGDHCQYCRAGSYGNATTQEGCR------KCDCNSHGNSVLGVCDSITGECICQDNTQG 141
HCQ G N C KC C+ + C + EC G
Sbjct: 685 YHHPHCQSQADGCLSNPCVHGNCTHIVSGYKCVCDP--GWIGDYCSTEGNECKSNPCQNG 742
Query: 142 KNCERCLPGY 151
CE L GY
Sbjct: 743 GTCEDLLNGY 752
Score = 131 (51.2 bits), Expect = 0.00013, P = 0.00013
Identities = 89/358 (24%), Positives = 128/358 (35%)
Query: 49 YSCQCELGWTGVDCSVN---C----LCNNHSTCVH--GIGICDECHDWTTGDHCQ--Y-- 95
+SC C+ G+TG C ++ C LC++ TC++ G C +C TG C+ Y
Sbjct: 138 FSCICQSGYTGQKCEIDVNECATSGLCHHGGTCINLPGSFRC-QCKPGYTGHRCESNYVP 196
Query: 96 CRAGSYGNATT--QEGCRKCDCNSHGNSVLGVCDSITGEC---------ICQDNTQGKNC 144
C N T Q +CN +C+ +C IC D NC
Sbjct: 197 CSPSPCMNGGTCHQTSDFTFECNCLPGFKGSICEKNVDDCPNHNCQNGGICVDGVNTYNC 256
Query: 145 ERCLPGYYGD--PTDGGTCYYQCMA-RGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLW 201
RC P + G D C Q A + T G G N W G D C
Sbjct: 257 -RCPPQWTGQFCTEDVDECQLQPNACQNGGTCTNHNG-GYACVCVNGWSGDD-----CSK 309
Query: 202 IIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFC 261
I + S A + R+ + C E + L D V Q G C
Sbjct: 310 NIDDCFTA-SCANGSTCIDRVA-SFSCICPEGKAGLLCHLDD--ACVSNPCQK---GALC 362
Query: 262 TEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQ----CV 317
+ G+ + G +K +E + S P C C+N + C
Sbjct: 363 DTNPVNGHYICTCPQG-----HKGADCTEDVDECAMANSNP--CEHAGKCVNTEGSFHCE 415
Query: 318 CPPRRTGPDCQEEICPNECHE--FLNHGTC-DLL--LTGVHITHG-RTLHYQVDLIRC 369
C TGP C+ +I NECH N TC D + T + + G + +H + D+ C
Sbjct: 416 CLKGYTGPRCEMDI--NECHSNPCQNDATCLDKIGGFTCLCMPVGFKGVHCEEDIDEC 471
Score = 126 (49.4 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 43/150 (28%), Positives = 65/150 (43%)
Query: 20 RCTVLLLYIFNASLCYNKCIYGYCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGI 78
+C + + + LC++ G C P + CQC+ G+TG C N + + S C++G
Sbjct: 150 KCEIDVNECATSGLCHHG---GTCINLPGSFRCQCKPGYTGHRCESNYVPCSPSPCMNG- 205
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC--DCNSHGNSVLGVC-DSI-TGECI 134
G C + D+T C C G G+ C K DC +H G+C D + T C
Sbjct: 206 GTCHQTSDFTF--ECN-CLPGFKGSI-----CEKNVDDCPNHNCQNGGICVDGVNTYNCR 257
Query: 135 CQDNTQGKNCERCLPGYYGDPT---DGGTC 161
C G+ C + P +GGTC
Sbjct: 258 CPPQWTGQFCTEDVDECQLQPNACQNGGTC 287
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 47/141 (33%), Positives = 60/141 (42%)
Query: 32 SLCYNKCIYGYC-KGPPDYSCQCELGWTGVDCSV-NCLCNNHSTCVHGIGICDEC----H 85
S C NK G C + C C GWTG C V N C ++ GI + C H
Sbjct: 1042 SPCKNK---GTCFQSGAQTRCDCPSGWTGAYCDVPNVSCQVAAS-QRGITVDQLCQHSGH 1097
Query: 86 DWTTGD-H-CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQG 141
G+ H CQ CR G Y + +E +CD + N C D + G +C C QG
Sbjct: 1098 CLNVGNTHRCQ-CRVG-YTGSYCEEQLDECDSSPCQNGA--TCRDHLGGYQCECVPGYQG 1153
Query: 142 KNCERCLPGYYGDPT-DGGTC 161
NCE + P +GGTC
Sbjct: 1154 VNCEYEVDECQFQPCQNGGTC 1174
Score = 120 (47.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 41/152 (26%), Positives = 61/152 (40%)
Query: 34 CY-NKCIY-GYCKGPPD-YSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDW 87
C+ N C++ G C + Y C C G +GV+C N C N CVHG +C D
Sbjct: 584 CHSNPCLHQGRCIDLVNGYQCNCLPGTSGVNCENNFDDCASN---PCVHG-----DCIDG 635
Query: 88 TTGDHCQYCRAGSYG---NATTQEGCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKN 143
+C C+ G G N E C CN+ G + + + G C+C + +
Sbjct: 636 INRYNCA-CKPGFTGPRCNVDIDE-CASSPCNNGGTCI----NEVNGFRCVCPEGYHHPH 689
Query: 144 CERCLPGYYGDPTDGGTCYYQCMARGMLTGPG 175
C+ G +P G C + + PG
Sbjct: 690 CQSQADGCLSNPCVHGNCTHIVSGYKCVCDPG 721
Score = 116 (45.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 45/161 (27%), Positives = 67/161 (41%)
Query: 16 DALSRCTVLLLYIFNASLCY---NKCIYGYCKGPP-------DYSCQCELGWTGVDCSVN 65
D ++ + + L F+ C N+C+ C+ Y+C+C+ G+ G +C N
Sbjct: 900 DGINSFSCICLPGFHGDKCQTDTNECLSEPCRNGGTCTHYVNSYTCKCQPGFEGTNCENN 959
Query: 66 CLCNNHSTCVHGIGIC-DECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG 124
S+C +G G C D + +T CQ C G G E +CD SH G
Sbjct: 960 IDECTESSCFNG-GTCVDGINSFT----CQ-CPVGFTGPFCLME-INECD--SHPCLNKG 1010
Query: 125 VCDSITGE--CICQDNTQGKNCERCLPGYYGDPTDG-GTCY 162
C G+ CIC GKNC+ + P GTC+
Sbjct: 1011 SCVDSLGKYRCICPLGYTGKNCQTPMDLCSKSPCKNKGTCF 1051
Score = 104 (41.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 50/181 (27%), Positives = 65/181 (35%)
Query: 33 LCY--NKCIYGYCKGPPD---YSCQCELGWTGVDCS-VN-CL---CNNHSTC-VHGIGIC 81
+CY C+ G P Y C C G+TG DC ++ C C N STC V G
Sbjct: 80 ICYVSQPCLNGGTCHPHSQETYECVCPPGYTGKDCQWIDACTSQPCANGSTCTVSGHKFS 139
Query: 82 DECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNT 139
C TG C+ T C HG G C ++ G C C+
Sbjct: 140 CICQSGYTGQKCEI----DVNECATSGLCH------HG----GTCINLPGSFRCQCKPGY 185
Query: 140 QGKNCE-RCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE 198
G CE +P +GGTC+ Q P G + E+N D P+
Sbjct: 186 TGHRCESNYVPCSPSPCMNGGTCH-QTSDFTFECNCLP-GFKGSICEKNV---DDCPNHN 240
Query: 199 C 199
C
Sbjct: 241 C 241
Score = 101 (40.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/139 (30%), Positives = 60/139 (43%)
Query: 50 SCQCELGWTGVDC--SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+C+C G+TG DC S + +C C++G G C H T + C C G Y T
Sbjct: 61 TCKCAPGFTGEDCQYSESHICYVSQPCLNG-GTCHP-HSQETYE-C-VCPPG-Y----TG 111
Query: 108 EGCRKCD-CNSHGNSVLGVCDSITGE---CICQDNTQGKNCE----RCLPGYYGDPTDGG 159
+ C+ D C S + C +++G CICQ G+ CE C G GG
Sbjct: 112 KDCQWIDACTSQPCANGSTC-TVSGHKFSCICQSGYTGQKCEIDVNECATS--GLCHHGG 168
Query: 160 TCY-----YQCMARGMLTG 173
TC ++C + TG
Sbjct: 169 TCINLPGSFRCQCKPGYTG 187
Score = 98 (39.6 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 41/131 (31%), Positives = 50/131 (38%)
Query: 229 PCNENAVYIYDGLPDF-VTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQG- 286
PC +N DG+ F + G H G C D + G T HY
Sbjct: 891 PC-QNGASCVDGINSFSCICLPGFH-----GDKCQTDTNECLSEPCRNGGTCT-HYVNSY 943
Query: 287 ----KPS-EGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNEC 336
+P EG N I C + C TC++ C CP TGP C EI NEC
Sbjct: 944 TCKCQPGFEGTNCENNIDECTESSCFNGGTCVDGINSFTCQCPVGFTGPFCLMEI--NEC 1001
Query: 337 --HEFLNHGTC 345
H LN G+C
Sbjct: 1002 DSHPCLNKGSC 1012
Score = 97 (39.2 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 44/157 (28%), Positives = 60/157 (38%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVN--C---LCNNHSTC----VHGIGICD 82
C N KCI Y G Y C+C G+ G C C C N TC + G C
Sbjct: 7 CVNEGKCI-PYQNGT-GY-CKCREGYLGDYCQYRNPCESNTCKNGGTCETTSLIGKATC- 62
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
+C TG+ CQY S+ +Q C+ H T EC+C GK
Sbjct: 63 KCAPGFTGEDCQYSE--SHICYVSQPCLNGGTCHPHSQE--------TYECVCPPGYTGK 112
Query: 143 NCERCLPGYYGDP-TDGGTCY-----YQCMARGMLTG 173
+C+ + P +G TC + C+ + TG
Sbjct: 113 DCQ-WIDACTSQPCANGSTCTVSGHKFSCICQSGYTG 148
Score = 93 (37.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 33/105 (31%), Positives = 43/105 (40%)
Query: 49 YSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT 105
+ C C G+ C CL N CVHG C +G C C G G+
Sbjct: 677 FRCVCPEGYHHPHCQSQADGCLSN---PCVHG-----NCTHIVSGYKC-VCDPGWIGDYC 727
Query: 106 TQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCL 148
+ EG +C N N G C D + G C C+ +G+N ER L
Sbjct: 728 STEG-NECKSNPCQNG--GTCEDLLNGYRCTCRKGFKGENSERQL 769
Score = 75 (31.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 298 IFSC-PDKCP--ENRTCINNQ-CVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
I +C PD C E + I++ C+C P G C E+I NECH L+ G C L+ G
Sbjct: 544 INNCDPDPCHHGECQDGIDSYTCICNPGYMGAICSEQI--NECHSNPCLHQGRCIDLVNG 601
Score = 74 (31.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 26/78 (33%), Positives = 31/78 (39%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQEEI-------CPN--E 335
EG T I C K C + C N Q C C P TG DC I C N
Sbjct: 838 EGERCTVDIDECLSKPCKNHALCHNIQGSYLCECRPGFTGGDCDSNIDDCLSNPCQNGAS 897
Query: 336 CHEFLNHGTCDLLLTGVH 353
C + +N +C + L G H
Sbjct: 898 CVDGINSFSC-ICLPGFH 914
Score = 72 (30.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 24/74 (32%), Positives = 29/74 (39%)
Query: 287 KPS-EGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNECH 337
KP G I C C TCIN +CVCP P CQ + C N C
Sbjct: 644 KPGFTGPRCNVDIDECASSPCNNGGTCINEVNGFRCVCPEGYHHPHCQSQADGCLSNPCV 703
Query: 338 EFLNHGTCDLLLTG 351
HG C +++G
Sbjct: 704 ----HGNCTHIVSG 713
Score = 70 (29.7 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 30/120 (25%), Positives = 48/120 (40%)
Query: 238 YDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATY- 296
Y +P+ V + + T+ C H G+ + V H Q + G+ +Y
Sbjct: 1069 YCDVPNVSCQVAASQRGITVDQLC---QHSGHCL-----NVGNTHRCQCRV--GYTGSYC 1118
Query: 297 --QIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTC-DLL 348
Q+ C C TC ++ QC C P G +C+ E+ + N GTC DL+
Sbjct: 1119 EEQLDECDSSPCQNGATCRDHLGGYQCECVPGYQGVNCEYEVDECQFQPCQNGGTCIDLV 1178
Score = 69 (29.3 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTGVHIT 355
+CVC P G C E NEC + N GTC+ LL G T
Sbjct: 715 KCVCDPGWIGDYCSTE--GNECKSNPCQNGGTCEDLLNGYRCT 755
Score = 65 (27.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 290 EGFNATYQIFSC-PDKCPENRTCIN--NQ--CVCPPRRTGPDCQEEICPNECHEFLNHGT 344
+G + I C + C N C++ N+ CVCPP +G CQ +I LN
Sbjct: 460 KGVHCEEDIDECLSNPCVNNGECLDKVNRFLCVCPPGFSGAVCQIDIDDCSSTPCLNGAK 519
Query: 345 C 345
C
Sbjct: 520 C 520
Score = 64 (27.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 291 GFNATY---QIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQE--EICPNE-CHEF 339
GF + +I C C +C+++ +C+CP TG +CQ ++C C
Sbjct: 988 GFTGPFCLMEINECDSHPCLNKGSCVDSLGKYRCICPLGYTGKNCQTPMDLCSKSPCK-- 1045
Query: 340 LNHGTC 345
N GTC
Sbjct: 1046 -NKGTC 1050
Score = 60 (26.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 305 CPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNECHEFLNHGTC 345
C CI++ +C C TG C+E I C P+ CH HG C
Sbjct: 514 CLNGAKCIDHPNGYECQCATGFTGVLCEENINNCDPDPCH----HGEC 557
Score = 52 (23.4 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 18/64 (28%), Positives = 23/64 (35%)
Query: 291 GFNATYQIFSC-PDKCPENRTCINNQ------CVCPPRRTGPDCQEEICPNEC--HEFLN 341
G N + C PD C + C + C C P G C +I +EC N
Sbjct: 799 GVNCQVVVAPCSPDPCENSGICQESPDSEGYTCQCAPGWEGERCTVDI--DECLSKPCKN 856
Query: 342 HGTC 345
H C
Sbjct: 857 HALC 860
Score = 51 (23.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 297 QIFSC-PDKCPENRTCIN--N--QCVCPPRRTGPDCQ---EEICPNECHEFLNHGTC 345
QI C + C CI+ N QC C P +G +C+ ++ N C HG C
Sbjct: 580 QINECHSNPCLHQGRCIDLVNGYQCNCLPGTSGVNCENNFDDCASNPCV----HGDC 632
Score = 42 (19.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 25/80 (31%), Positives = 30/80 (37%)
Query: 305 CPENRTCINN----QCVCPPRRTGPDCQEEICPN-ECHEFLNH-G-TCDLLL--TGVHIT 355
C TC + +C CP TG C PN C + G T D L +G +
Sbjct: 1044 CKNKGTCFQSGAQTRCDCPSGWTGAYCD---VPNVSCQVAASQRGITVDQLCQHSGHCLN 1100
Query: 356 HGRTLHYQVDLIRCTCRQVY 375
G T H RC CR Y
Sbjct: 1101 VGNT-H------RCQCRVGY 1113
>UNIPROTKB|F1P236 [details] [associations]
symbol:F1P236 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0050793 "regulation of
developmental process" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0002437 "inflammatory
response to antigenic stimulus" evidence=IEA] [GO:0003184
"pulmonary valve morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0016049 "cell growth"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] [GO:0046849 "bone
remodeling" evidence=IEA] [GO:0060413 "atrial septum morphogenesis"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0072602 "interleukin-4 secretion" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0007275
GO:GO:0005634 GO:GO:0008285 GO:GO:0009986 GO:GO:0030154
GO:GO:0005887 GO:GO:0002437 GO:GO:0016049 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0007050 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0043065 PROSITE:PS01186 PROSITE:PS00010
GO:GO:0006959 GO:GO:0050793 GO:GO:0046579 Pfam:PF12661
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985 EMBL:AADN02033880
EMBL:AADN02033881 EMBL:AADN02033882 IPI:IPI00822103
Ensembl:ENSGALT00000039988 ArrayExpress:F1P236 Uniprot:F1P236
Length = 2442
Score = 172 (65.6 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 91/343 (26%), Positives = 132/343 (38%)
Query: 36 NKCIYGYC-KGPPDYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGI-GICDECHDW 87
N C++G C G Y+C C+ G+TG C+V+ C CNN TC++ + G C +
Sbjct: 628 NPCVHGDCIDGINRYNCACKPGFTGPRCNVDIDECASSPCNNGGTCINEVNGFRCVCPEG 687
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCE 145
HCQ + +GC C HGN C I +C+C G C
Sbjct: 688 YHHPHCQ----------SQADGCLSNPC-VHGN-----CTHIVSGYKCVCDPGWIGDYCS 731
Query: 146 RCLPGYYGDPT-DGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSREC 199
+P +GGTC Y+C R G + + +G +A E + S
Sbjct: 732 TEGNECKSNPCQNGGTCEDLLNGYRCTCRKGFKGENSERIATG---ESAEEDQSNGSCIS 788
Query: 200 LWIIG-QSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTT-- 256
L++ L N +++ PD PC EN+ + PD S G T Q
Sbjct: 789 LYLSHLPCLLCNPGVNCQVVVAPCSPD---PC-ENSGICQES-PD---SEGYTCQCAPGW 840
Query: 257 LGVFCTEDMHRGYEVLEAKSGVMTIHYKQG------KPS-EGFNATYQIFSC-PDKCPEN 308
G CT D+ K+ + H QG +P G + I C + C
Sbjct: 841 EGERCTVDIDECLSK-PCKNHALC-HNIQGSYLCECRPGFTGGDCDSNIDDCLSNPCQNG 898
Query: 309 RTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
+C++ C+C P G CQ + NEC N GTC
Sbjct: 899 ASCVDGINSFSCICLPGFHGDKCQTDT--NECLSEPCRNGGTC 939
Score = 152 (58.6 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 54/153 (35%), Positives = 61/153 (39%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KCI P Y CQC G+TGV C N + C HG EC D
Sbjct: 517 CLNGAKCI----DHPNGYECQCATGFTGVLCEENINNCDPDPCHHG-----ECQDGIDSY 567
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVL--GVC-DSITG-ECICQDNTQGKNCER- 146
C C G Y A E +C H N L G C D + G +C C T G NCE
Sbjct: 568 TC-ICNPG-YMGAICSEQINEC----HSNPCLHQGRCIDLVNGYQCNCLPGTSGVNCENN 621
Query: 147 ---CL--PGYYGDPTDGGTCYYQCMARGMLTGP 174
C P +GD DG Y C + TGP
Sbjct: 622 FDDCASNPCVHGDCIDGIN-RYNCACKPGFTGP 653
Score = 142 (55.0 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 44/150 (29%), Positives = 64/150 (42%)
Query: 41 GYCKGPPD---YSCQCELGWTGVDCSVN---CL---CNNHSTC--VHGIGICDECHDWTT 89
G C+ PD Y+CQC GW G C+V+ CL C NH+ C + G +C EC T
Sbjct: 821 GICQESPDSEGYTCQCAPGWEGERCTVDIDECLSKPCKNHALCHNIQGSYLC-ECRPGFT 879
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
G C + + C C + + V G+ +S + CIC G C+
Sbjct: 880 GGDCD----------SNIDDCLSNPCQNGASCVDGI-NSFS--CICLPGFHGDKCQTDTN 926
Query: 150 GYYGDPT-DGGTCYYQCMARGMLTGPGPQG 178
+P +GGTC + + PG +G
Sbjct: 927 ECLSEPCRNGGTCTHYVNSYTCKCQPGFEG 956
Score = 131 (51.2 bits), Expect = 0.00013, P = 0.00013
Identities = 89/358 (24%), Positives = 128/358 (35%)
Query: 49 YSCQCELGWTGVDCSVN---C----LCNNHSTCVH--GIGICDECHDWTTGDHCQ--Y-- 95
+SC C+ G+TG C ++ C LC++ TC++ G C +C TG C+ Y
Sbjct: 141 FSCICQSGYTGQKCEIDVNECATSGLCHHGGTCINLPGSFRC-QCKPGYTGHRCESNYVP 199
Query: 96 CRAGSYGNATT--QEGCRKCDCNSHGNSVLGVCDSITGEC---------ICQDNTQGKNC 144
C N T Q +CN +C+ +C IC D NC
Sbjct: 200 CSPSPCMNGGTCHQTSDFTFECNCLPGFKGSICEKNVDDCPNHNCQNGGICVDGVNTYNC 259
Query: 145 ERCLPGYYGD--PTDGGTCYYQCMA-RGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLW 201
RC P + G D C Q A + T G G N W G D C
Sbjct: 260 -RCPPQWTGQFCTEDVDECQLQPNACQNGGTCTNHNG-GYACVCVNGWSGDD-----CSK 312
Query: 202 IIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFC 261
I + S A + R+ + C E + L D V Q G C
Sbjct: 313 NIDDCFTA-SCANGSTCIDRVA-SFSCICPEGKAGLLCHLDD--ACVSNPCQK---GALC 365
Query: 262 TEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQ----CV 317
+ G+ + G +K +E + S P C C+N + C
Sbjct: 366 DTNPVNGHYICTCPQG-----HKGADCTEDVDECAMANSNP--CEHAGKCVNTEGSFHCE 418
Query: 318 CPPRRTGPDCQEEICPNECHE--FLNHGTC-DLL--LTGVHITHG-RTLHYQVDLIRC 369
C TGP C+ +I NECH N TC D + T + + G + +H + D+ C
Sbjct: 419 CLKGYTGPRCEMDI--NECHSNPCQNDATCLDKIGGFTCLCMPVGFKGVHCEEDIDEC 474
Score = 126 (49.4 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 43/150 (28%), Positives = 65/150 (43%)
Query: 20 RCTVLLLYIFNASLCYNKCIYGYCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGI 78
+C + + + LC++ G C P + CQC+ G+TG C N + + S C++G
Sbjct: 153 KCEIDVNECATSGLCHHG---GTCINLPGSFRCQCKPGYTGHRCESNYVPCSPSPCMNG- 208
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC--DCNSHGNSVLGVC-DSI-TGECI 134
G C + D+T C C G G+ C K DC +H G+C D + T C
Sbjct: 209 GTCHQTSDFTF--ECN-CLPGFKGSI-----CEKNVDDCPNHNCQNGGICVDGVNTYNCR 260
Query: 135 CQDNTQGKNCERCLPGYYGDPT---DGGTC 161
C G+ C + P +GGTC
Sbjct: 261 CPPQWTGQFCTEDVDECQLQPNACQNGGTC 290
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 47/141 (33%), Positives = 60/141 (42%)
Query: 32 SLCYNKCIYGYC-KGPPDYSCQCELGWTGVDCSV-NCLCNNHSTCVHGIGICDEC----H 85
S C NK G C + C C GWTG C V N C ++ GI + C H
Sbjct: 1045 SPCKNK---GTCFQSGAQTRCDCPSGWTGAYCDVPNVSCQVAAS-QRGITVDQLCQHSGH 1100
Query: 86 DWTTGD-H-CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQG 141
G+ H CQ CR G Y + +E +CD + N C D + G +C C QG
Sbjct: 1101 CLNVGNTHRCQ-CRVG-YTGSYCEEQLDECDSSPCQNGA--TCRDHLGGYQCECVPGYQG 1156
Query: 142 KNCERCLPGYYGDPT-DGGTC 161
NCE + P +GGTC
Sbjct: 1157 VNCEYEVDECQFQPCQNGGTC 1177
Score = 116 (45.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 45/161 (27%), Positives = 67/161 (41%)
Query: 16 DALSRCTVLLLYIFNASLCY---NKCIYGYCKGPP-------DYSCQCELGWTGVDCSVN 65
D ++ + + L F+ C N+C+ C+ Y+C+C+ G+ G +C N
Sbjct: 903 DGINSFSCICLPGFHGDKCQTDTNECLSEPCRNGGTCTHYVNSYTCKCQPGFEGTNCENN 962
Query: 66 CLCNNHSTCVHGIGIC-DECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG 124
S+C +G G C D + +T CQ C G G E +CD SH G
Sbjct: 963 IDECTESSCFNG-GTCVDGINSFT----CQ-CPVGFTGPFCLME-INECD--SHPCLNKG 1013
Query: 125 VCDSITGE--CICQDNTQGKNCERCLPGYYGDPTDG-GTCY 162
C G+ CIC GKNC+ + P GTC+
Sbjct: 1014 SCVDSLGKYRCICPLGYTGKNCQTPMDLCSKSPCKNKGTCF 1054
Score = 104 (41.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 50/181 (27%), Positives = 65/181 (35%)
Query: 33 LCY--NKCIYGYCKGPPD---YSCQCELGWTGVDCS-VN-CL---CNNHSTC-VHGIGIC 81
+CY C+ G P Y C C G+TG DC ++ C C N STC V G
Sbjct: 83 ICYVSQPCLNGGTCHPHSQETYECVCPPGYTGKDCQWIDACTSQPCANGSTCTVSGHKFS 142
Query: 82 DECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNT 139
C TG C+ T C HG G C ++ G C C+
Sbjct: 143 CICQSGYTGQKCEI----DVNECATSGLCH------HG----GTCINLPGSFRCQCKPGY 188
Query: 140 QGKNCE-RCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE 198
G CE +P +GGTC+ Q P G + E+N D P+
Sbjct: 189 TGHRCESNYVPCSPSPCMNGGTCH-QTSDFTFECNCLP-GFKGSICEKNV---DDCPNHN 243
Query: 199 C 199
C
Sbjct: 244 C 244
Score = 101 (40.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/139 (30%), Positives = 60/139 (43%)
Query: 50 SCQCELGWTGVDC--SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+C+C G+TG DC S + +C C++G G C H T + C C G Y T
Sbjct: 64 TCKCAPGFTGEDCQYSESHICYVSQPCLNG-GTCHP-HSQETYE-C-VCPPG-Y----TG 114
Query: 108 EGCRKCD-CNSHGNSVLGVCDSITGE---CICQDNTQGKNCE----RCLPGYYGDPTDGG 159
+ C+ D C S + C +++G CICQ G+ CE C G GG
Sbjct: 115 KDCQWIDACTSQPCANGSTC-TVSGHKFSCICQSGYTGQKCEIDVNECATS--GLCHHGG 171
Query: 160 TCY-----YQCMARGMLTG 173
TC ++C + TG
Sbjct: 172 TCINLPGSFRCQCKPGYTG 190
Score = 98 (39.6 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 41/131 (31%), Positives = 50/131 (38%)
Query: 229 PCNENAVYIYDGLPDF-VTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQG- 286
PC +N DG+ F + G H G C D + G T HY
Sbjct: 894 PC-QNGASCVDGINSFSCICLPGFH-----GDKCQTDTNECLSEPCRNGGTCT-HYVNSY 946
Query: 287 ----KPS-EGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNEC 336
+P EG N I C + C TC++ C CP TGP C EI NEC
Sbjct: 947 TCKCQPGFEGTNCENNIDECTESSCFNGGTCVDGINSFTCQCPVGFTGPFCLMEI--NEC 1004
Query: 337 --HEFLNHGTC 345
H LN G+C
Sbjct: 1005 DSHPCLNKGSC 1015
Score = 97 (39.2 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 44/157 (28%), Positives = 60/157 (38%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVN--C---LCNNHSTC----VHGIGICD 82
C N KCI Y G Y C+C G+ G C C C N TC + G C
Sbjct: 10 CVNEGKCI-PYQNGT-GY-CKCREGYLGDYCQYRNPCESNTCKNGGTCETTSLIGKATC- 65
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
+C TG+ CQY S+ +Q C+ H T EC+C GK
Sbjct: 66 KCAPGFTGEDCQYSE--SHICYVSQPCLNGGTCHPHSQE--------TYECVCPPGYTGK 115
Query: 143 NCERCLPGYYGDP-TDGGTCY-----YQCMARGMLTG 173
+C+ + P +G TC + C+ + TG
Sbjct: 116 DCQ-WIDACTSQPCANGSTCTVSGHKFSCICQSGYTG 151
Score = 75 (31.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 298 IFSC-PDKCP--ENRTCINNQ-CVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
I +C PD C E + I++ C+C P G C E+I NECH L+ G C L+ G
Sbjct: 547 INNCDPDPCHHGECQDGIDSYTCICNPGYMGAICSEQI--NECHSNPCLHQGRCIDLVNG 604
Score = 70 (29.7 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 30/120 (25%), Positives = 48/120 (40%)
Query: 238 YDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATY- 296
Y +P+ V + + T+ C H G+ + V H Q + G+ +Y
Sbjct: 1072 YCDVPNVSCQVAASQRGITVDQLC---QHSGHCL-----NVGNTHRCQCRV--GYTGSYC 1121
Query: 297 --QIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTC-DLL 348
Q+ C C TC ++ QC C P G +C+ E+ + N GTC DL+
Sbjct: 1122 EEQLDECDSSPCQNGATCRDHLGGYQCECVPGYQGVNCEYEVDECQFQPCQNGGTCIDLV 1181
Score = 69 (29.3 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTGVHIT 355
+CVC P G C E NEC + N GTC+ LL G T
Sbjct: 718 KCVCDPGWIGDYCSTE--GNECKSNPCQNGGTCEDLLNGYRCT 758
Score = 65 (27.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 290 EGFNATYQIFSC-PDKCPENRTCIN--NQ--CVCPPRRTGPDCQEEICPNECHEFLNHGT 344
+G + I C + C N C++ N+ CVCPP +G CQ +I LN
Sbjct: 463 KGVHCEEDIDECLSNPCVNNGECLDKVNRFLCVCPPGFSGAVCQIDIDDCSSTPCLNGAK 522
Query: 345 C 345
C
Sbjct: 523 C 523
Score = 64 (27.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 291 GFNATY---QIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQE--EICPNE-CHEF 339
GF + +I C C +C+++ +C+CP TG +CQ ++C C
Sbjct: 991 GFTGPFCLMEINECDSHPCLNKGSCVDSLGKYRCICPLGYTGKNCQTPMDLCSKSPCK-- 1048
Query: 340 LNHGTC 345
N GTC
Sbjct: 1049 -NKGTC 1053
Score = 60 (26.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 305 CPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNECHEFLNHGTC 345
C CI++ +C C TG C+E I C P+ CH HG C
Sbjct: 517 CLNGAKCIDHPNGYECQCATGFTGVLCEENINNCDPDPCH----HGEC 560
Score = 51 (23.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 297 QIFSC-PDKCPENRTCIN--N--QCVCPPRRTGPDCQ---EEICPNECHEFLNHGTC 345
QI C + C CI+ N QC C P +G +C+ ++ N C HG C
Sbjct: 583 QINECHSNPCLHQGRCIDLVNGYQCNCLPGTSGVNCENNFDDCASNPCV----HGDC 635
Score = 42 (19.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 25/80 (31%), Positives = 30/80 (37%)
Query: 305 CPENRTCINN----QCVCPPRRTGPDCQEEICPN-ECHEFLNH-G-TCDLLL--TGVHIT 355
C TC + +C CP TG C PN C + G T D L +G +
Sbjct: 1047 CKNKGTCFQSGAQTRCDCPSGWTGAYCD---VPNVSCQVAASQRGITVDQLCQHSGHCLN 1103
Query: 356 HGRTLHYQVDLIRCTCRQVY 375
G T H RC CR Y
Sbjct: 1104 VGNT-H------RCQCRVGY 1116
>UNIPROTKB|F1P4C0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 OMA:RSQDFGK GO:GO:0060668
EMBL:AADN02005946 EMBL:AADN02005947 EMBL:AADN02005948
EMBL:AADN02005949 EMBL:AADN02005950 IPI:IPI00573187
Ensembl:ENSGALT00000018613 ArrayExpress:F1P4C0 Uniprot:F1P4C0
Length = 603
Score = 190 (71.9 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNA----TTQEGCRKCDCNSHGNSVLGV-----CDSI 129
G+CD C T G HCQ C+ G Y + + + C+ C C+ G++ L + CD
Sbjct: 331 GVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDACKPCSCHPLGSAALPLGPRTFCDPS 390
Query: 130 TGECICQDNTQGKNCERCLPGYYGDPTDG 158
TG+C C+ G C+RCLPGY+G T G
Sbjct: 391 TGDCPCKPGVAGPRCDRCLPGYWGFGTSG 419
Score = 130 (50.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 35/97 (36%), Positives = 49/97 (50%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ--EG-------CRKCDCNSHGNSV--- 122
VHG +C H+ T G HCQ+C A Y + Q +G C+ C CN H ++
Sbjct: 263 VHGKCMCK--HN-TAGPHCQHC-APLYNDRPWQAADGKTGAPRECQSCKCNGHADTCHFD 318
Query: 123 ----LGVCDSITGECI-CQDNTQGKNCERCLPGYYGD 154
L + G C CQ NT+G++C+RC PG+Y D
Sbjct: 319 MDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRD 355
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 38/128 (29%), Positives = 54/128 (42%)
Query: 48 DYSCQCELGWTGV--DCSVNCLCNNHS-TCVHGI-----------GICDECHDWTTGDHC 93
D Q G TG +C +C CN H+ TC + G+CD C T G HC
Sbjct: 287 DRPWQAADGKTGAPRECQ-SCKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHC 345
Query: 94 QYCRAGSYGNA----TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
Q C+ G Y + + + C+ C C+ G++ L + C +T G +C C P
Sbjct: 346 QRCKPGFYRDLRKPFSAPDACKPCSCHPLGSAAL----PLGPRTFCDPST-G-DCP-CKP 398
Query: 150 GYYGDPTD 157
G G D
Sbjct: 399 GVAGPRCD 406
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 6/12 (50%), Positives = 6/12 (50%)
Query: 316 CVCPPRRTGPDC 327
C C P GP C
Sbjct: 394 CPCKPGVAGPRC 405
>UNIPROTKB|F1N9V3 [details] [associations]
symbol:F1N9V3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0050793 "regulation of
developmental process" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0002437 "inflammatory
response to antigenic stimulus" evidence=IEA] [GO:0003184
"pulmonary valve morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0016049 "cell growth"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] [GO:0046849 "bone
remodeling" evidence=IEA] [GO:0060413 "atrial septum morphogenesis"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0072602 "interleukin-4 secretion" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0007275
GO:GO:0005634 GO:GO:0008285 GO:GO:0009986 GO:GO:0030154
GO:GO:0005887 GO:GO:0002437 GO:GO:0016049 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0007050 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0043065 PROSITE:PS01186 PROSITE:PS00010
GO:GO:0006959 GO:GO:0050793 GO:GO:0046579 Pfam:PF12661
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985 OMA:VCMPGFT
EMBL:AADN02033880 EMBL:AADN02033881 EMBL:AADN02033882
IPI:IPI00812690 Ensembl:ENSGALT00000004611 ArrayExpress:F1N9V3
Uniprot:F1N9V3
Length = 2467
Score = 172 (65.6 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 91/343 (26%), Positives = 132/343 (38%)
Query: 36 NKCIYGYC-KGPPDYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGI-GICDECHDW 87
N C++G C G Y+C C+ G+TG C+V+ C CNN TC++ + G C +
Sbjct: 653 NPCVHGDCIDGINRYNCACKPGFTGPRCNVDIDECASSPCNNGGTCINEVNGFRCVCPEG 712
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCE 145
HCQ + +GC C HGN C I +C+C G C
Sbjct: 713 YHHPHCQ----------SQADGCLSNPC-VHGN-----CTHIVSGYKCVCDPGWIGDYCS 756
Query: 146 RCLPGYYGDPT-DGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSREC 199
+P +GGTC Y+C R G + + +G +A E + S
Sbjct: 757 TEGNECKSNPCQNGGTCEDLLNGYRCTCRKGFKGENSERIATG---ESAEEDQSNGSCIS 813
Query: 200 LWIIG-QSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTT-- 256
L++ L N +++ PD PC EN+ + PD S G T Q
Sbjct: 814 LYLSHLPCLLCNPGVNCQVVVAPCSPD---PC-ENSGICQES-PD---SEGYTCQCAPGW 865
Query: 257 LGVFCTEDMHRGYEVLEAKSGVMTIHYKQG------KPS-EGFNATYQIFSC-PDKCPEN 308
G CT D+ K+ + H QG +P G + I C + C
Sbjct: 866 EGERCTVDIDECLSK-PCKNHALC-HNIQGSYLCECRPGFTGGDCDSNIDDCLSNPCQNG 923
Query: 309 RTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
+C++ C+C P G CQ + NEC N GTC
Sbjct: 924 ASCVDGINSFSCICLPGFHGDKCQTDT--NECLSEPCRNGGTC 964
Score = 152 (58.6 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 54/153 (35%), Positives = 61/153 (39%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KCI P Y CQC G+TGV C N + C HG EC D
Sbjct: 542 CLNGAKCI----DHPNGYECQCATGFTGVLCEENINNCDPDPCHHG-----ECQDGIDSY 592
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVL--GVC-DSITG-ECICQDNTQGKNCER- 146
C C G Y A E +C H N L G C D + G +C C T G NCE
Sbjct: 593 TC-ICNPG-YMGAICSEQINEC----HSNPCLHQGRCIDLVNGYQCNCLPGTSGVNCENN 646
Query: 147 ---CL--PGYYGDPTDGGTCYYQCMARGMLTGP 174
C P +GD DG Y C + TGP
Sbjct: 647 FDDCASNPCVHGDCIDGIN-RYNCACKPGFTGP 678
Score = 142 (55.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 44/150 (29%), Positives = 64/150 (42%)
Query: 41 GYCKGPPD---YSCQCELGWTGVDCSVN---CL---CNNHSTC--VHGIGICDECHDWTT 89
G C+ PD Y+CQC GW G C+V+ CL C NH+ C + G +C EC T
Sbjct: 846 GICQESPDSEGYTCQCAPGWEGERCTVDIDECLSKPCKNHALCHNIQGSYLC-ECRPGFT 904
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
G C + + C C + + V G+ +S + CIC G C+
Sbjct: 905 GGDCD----------SNIDDCLSNPCQNGASCVDGI-NSFS--CICLPGFHGDKCQTDTN 951
Query: 150 GYYGDPT-DGGTCYYQCMARGMLTGPGPQG 178
+P +GGTC + + PG +G
Sbjct: 952 ECLSEPCRNGGTCTHYVNSYTCKCQPGFEG 981
Score = 131 (51.2 bits), Expect = 0.00013, P = 0.00013
Identities = 89/358 (24%), Positives = 128/358 (35%)
Query: 49 YSCQCELGWTGVDCSVN---C----LCNNHSTCVH--GIGICDECHDWTTGDHCQ--Y-- 95
+SC C+ G+TG C ++ C LC++ TC++ G C +C TG C+ Y
Sbjct: 166 FSCICQSGYTGQKCEIDVNECATSGLCHHGGTCINLPGSFRC-QCKPGYTGHRCESNYVP 224
Query: 96 CRAGSYGNATT--QEGCRKCDCNSHGNSVLGVCDSITGEC---------ICQDNTQGKNC 144
C N T Q +CN +C+ +C IC D NC
Sbjct: 225 CSPSPCMNGGTCHQTSDFTFECNCLPGFKGSICEKNVDDCPNHNCQNGGICVDGVNTYNC 284
Query: 145 ERCLPGYYGD--PTDGGTCYYQCMA-RGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLW 201
RC P + G D C Q A + T G G N W G D C
Sbjct: 285 -RCPPQWTGQFCTEDVDECQLQPNACQNGGTCTNHNG-GYACVCVNGWSGDD-----CSK 337
Query: 202 IIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFC 261
I + S A + R+ + C E + L D V Q G C
Sbjct: 338 NIDDCFTA-SCANGSTCIDRVA-SFSCICPEGKAGLLCHLDD--ACVSNPCQK---GALC 390
Query: 262 TEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQ----CV 317
+ G+ + G +K +E + S P C C+N + C
Sbjct: 391 DTNPVNGHYICTCPQG-----HKGADCTEDVDECAMANSNP--CEHAGKCVNTEGSFHCE 443
Query: 318 CPPRRTGPDCQEEICPNECHE--FLNHGTC-DLL--LTGVHITHG-RTLHYQVDLIRC 369
C TGP C+ +I NECH N TC D + T + + G + +H + D+ C
Sbjct: 444 CLKGYTGPRCEMDI--NECHSNPCQNDATCLDKIGGFTCLCMPVGFKGVHCEEDIDEC 499
Score = 126 (49.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 43/150 (28%), Positives = 65/150 (43%)
Query: 20 RCTVLLLYIFNASLCYNKCIYGYCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGI 78
+C + + + LC++ G C P + CQC+ G+TG C N + + S C++G
Sbjct: 178 KCEIDVNECATSGLCHHG---GTCINLPGSFRCQCKPGYTGHRCESNYVPCSPSPCMNG- 233
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC--DCNSHGNSVLGVC-DSI-TGECI 134
G C + D+T C C G G+ C K DC +H G+C D + T C
Sbjct: 234 GTCHQTSDFTF--ECN-CLPGFKGSI-----CEKNVDDCPNHNCQNGGICVDGVNTYNCR 285
Query: 135 CQDNTQGKNCERCLPGYYGDPT---DGGTC 161
C G+ C + P +GGTC
Sbjct: 286 CPPQWTGQFCTEDVDECQLQPNACQNGGTC 315
Score = 125 (49.1 bits), Expect = 0.00060, P = 0.00060
Identities = 47/141 (33%), Positives = 60/141 (42%)
Query: 32 SLCYNKCIYGYC-KGPPDYSCQCELGWTGVDCSV-NCLCNNHSTCVHGIGICDEC----H 85
S C NK G C + C C GWTG C V N C ++ GI + C H
Sbjct: 1070 SPCKNK---GTCFQSGAQTRCDCPSGWTGAYCDVPNVSCQVAAS-QRGITVDQLCQHSGH 1125
Query: 86 DWTTGD-H-CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQG 141
G+ H CQ CR G Y + +E +CD + N C D + G +C C QG
Sbjct: 1126 CLNVGNTHRCQ-CRVG-YTGSYCEEQLDECDSSPCQNGA--TCRDHLGGYQCECVPGYQG 1181
Query: 142 KNCERCLPGYYGDPT-DGGTC 161
NCE + P +GGTC
Sbjct: 1182 VNCEYEVDECQFQPCQNGGTC 1202
Score = 116 (45.9 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 45/161 (27%), Positives = 67/161 (41%)
Query: 16 DALSRCTVLLLYIFNASLCY---NKCIYGYCKGPP-------DYSCQCELGWTGVDCSVN 65
D ++ + + L F+ C N+C+ C+ Y+C+C+ G+ G +C N
Sbjct: 928 DGINSFSCICLPGFHGDKCQTDTNECLSEPCRNGGTCTHYVNSYTCKCQPGFEGTNCENN 987
Query: 66 CLCNNHSTCVHGIGIC-DECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG 124
S+C +G G C D + +T CQ C G G E +CD SH G
Sbjct: 988 IDECTESSCFNG-GTCVDGINSFT----CQ-CPVGFTGPFCLME-INECD--SHPCLNKG 1038
Query: 125 VCDSITGE--CICQDNTQGKNCERCLPGYYGDPTDG-GTCY 162
C G+ CIC GKNC+ + P GTC+
Sbjct: 1039 SCVDSLGKYRCICPLGYTGKNCQTPMDLCSKSPCKNKGTCF 1079
Score = 104 (41.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 50/181 (27%), Positives = 65/181 (35%)
Query: 33 LCY--NKCIYGYCKGPPD---YSCQCELGWTGVDCS-VN-CL---CNNHSTC-VHGIGIC 81
+CY C+ G P Y C C G+TG DC ++ C C N STC V G
Sbjct: 108 ICYVSQPCLNGGTCHPHSQETYECVCPPGYTGKDCQWIDACTSQPCANGSTCTVSGHKFS 167
Query: 82 DECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNT 139
C TG C+ T C HG G C ++ G C C+
Sbjct: 168 CICQSGYTGQKCEI----DVNECATSGLCH------HG----GTCINLPGSFRCQCKPGY 213
Query: 140 QGKNCE-RCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE 198
G CE +P +GGTC+ Q P G + E+N D P+
Sbjct: 214 TGHRCESNYVPCSPSPCMNGGTCH-QTSDFTFECNCLP-GFKGSICEKNV---DDCPNHN 268
Query: 199 C 199
C
Sbjct: 269 C 269
Score = 101 (40.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/139 (30%), Positives = 60/139 (43%)
Query: 50 SCQCELGWTGVDC--SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+C+C G+TG DC S + +C C++G G C H T + C C G Y T
Sbjct: 89 TCKCAPGFTGEDCQYSESHICYVSQPCLNG-GTCHP-HSQETYE-C-VCPPG-Y----TG 139
Query: 108 EGCRKCD-CNSHGNSVLGVCDSITGE---CICQDNTQGKNCE----RCLPGYYGDPTDGG 159
+ C+ D C S + C +++G CICQ G+ CE C G GG
Sbjct: 140 KDCQWIDACTSQPCANGSTC-TVSGHKFSCICQSGYTGQKCEIDVNECATS--GLCHHGG 196
Query: 160 TCY-----YQCMARGMLTG 173
TC ++C + TG
Sbjct: 197 TCINLPGSFRCQCKPGYTG 215
Score = 98 (39.6 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 41/131 (31%), Positives = 50/131 (38%)
Query: 229 PCNENAVYIYDGLPDF-VTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQG- 286
PC +N DG+ F + G H G C D + G T HY
Sbjct: 919 PC-QNGASCVDGINSFSCICLPGFH-----GDKCQTDTNECLSEPCRNGGTCT-HYVNSY 971
Query: 287 ----KPS-EGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNEC 336
+P EG N I C + C TC++ C CP TGP C EI NEC
Sbjct: 972 TCKCQPGFEGTNCENNIDECTESSCFNGGTCVDGINSFTCQCPVGFTGPFCLMEI--NEC 1029
Query: 337 --HEFLNHGTC 345
H LN G+C
Sbjct: 1030 DSHPCLNKGSC 1040
Score = 91 (37.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 43/152 (28%), Positives = 61/152 (40%)
Query: 34 CYNKCIYGYCKGPPDYSC-QCELGWTGVDCSVNCLCNNHSTCV---HGIGICDECHDWTT 89
C C++ C P +S QC +D S C+ N C+ +G G C +C +
Sbjct: 9 CMVVCLW-VCSSPIKFSALQC------MDDSKPCV--NEGKCIPYQNGTGYC-KCREGYL 58
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSH-GNSVLGVCDSITGECICQDNTQGKNCERCL 148
GD+CQY R N G C+ S G + TGE CQ ++ C
Sbjct: 59 GDYCQY-RNPCESNTCKNGGT--CETTSLIGKATCKCAPGFTGED-CQ-YSESHIC---- 109
Query: 149 PGYYGDPT-DGGTCY------YQCMARGMLTG 173
Y P +GGTC+ Y+C+ TG
Sbjct: 110 --YVSQPCLNGGTCHPHSQETYECVCPPGYTG 139
Score = 75 (31.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 298 IFSC-PDKCP--ENRTCINNQ-CVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
I +C PD C E + I++ C+C P G C E+I NECH L+ G C L+ G
Sbjct: 572 INNCDPDPCHHGECQDGIDSYTCICNPGYMGAICSEQI--NECHSNPCLHQGRCIDLVNG 629
Score = 70 (29.7 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 30/120 (25%), Positives = 48/120 (40%)
Query: 238 YDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATY- 296
Y +P+ V + + T+ C H G+ + V H Q + G+ +Y
Sbjct: 1097 YCDVPNVSCQVAASQRGITVDQLC---QHSGHCL-----NVGNTHRCQCRV--GYTGSYC 1146
Query: 297 --QIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTC-DLL 348
Q+ C C TC ++ QC C P G +C+ E+ + N GTC DL+
Sbjct: 1147 EEQLDECDSSPCQNGATCRDHLGGYQCECVPGYQGVNCEYEVDECQFQPCQNGGTCIDLV 1206
Score = 69 (29.3 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTGVHIT 355
+CVC P G C E NEC + N GTC+ LL G T
Sbjct: 743 KCVCDPGWIGDYCSTE--GNECKSNPCQNGGTCEDLLNGYRCT 783
Score = 65 (27.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 290 EGFNATYQIFSC-PDKCPENRTCIN--NQ--CVCPPRRTGPDCQEEICPNECHEFLNHGT 344
+G + I C + C N C++ N+ CVCPP +G CQ +I LN
Sbjct: 488 KGVHCEEDIDECLSNPCVNNGECLDKVNRFLCVCPPGFSGAVCQIDIDDCSSTPCLNGAK 547
Query: 345 C 345
C
Sbjct: 548 C 548
Score = 64 (27.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 291 GFNATY---QIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQE--EICPNE-CHEF 339
GF + +I C C +C+++ +C+CP TG +CQ ++C C
Sbjct: 1016 GFTGPFCLMEINECDSHPCLNKGSCVDSLGKYRCICPLGYTGKNCQTPMDLCSKSPCK-- 1073
Query: 340 LNHGTC 345
N GTC
Sbjct: 1074 -NKGTC 1078
Score = 60 (26.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 305 CPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNECHEFLNHGTC 345
C CI++ +C C TG C+E I C P+ CH HG C
Sbjct: 542 CLNGAKCIDHPNGYECQCATGFTGVLCEENINNCDPDPCH----HGEC 585
Score = 51 (23.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 297 QIFSC-PDKCPENRTCIN--N--QCVCPPRRTGPDCQ---EEICPNECHEFLNHGTC 345
QI C + C CI+ N QC C P +G +C+ ++ N C HG C
Sbjct: 608 QINECHSNPCLHQGRCIDLVNGYQCNCLPGTSGVNCENNFDDCASNPCV----HGDC 660
Score = 42 (19.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 25/80 (31%), Positives = 30/80 (37%)
Query: 305 CPENRTCINN----QCVCPPRRTGPDCQEEICPN-ECHEFLNH-G-TCDLLL--TGVHIT 355
C TC + +C CP TG C PN C + G T D L +G +
Sbjct: 1072 CKNKGTCFQSGAQTRCDCPSGWTGAYCD---VPNVSCQVAASQRGITVDQLCQHSGHCLN 1128
Query: 356 HGRTLHYQVDLIRCTCRQVY 375
G T H RC CR Y
Sbjct: 1129 VGNT-H------RCQCRVGY 1141
>RGD|1307089 [details] [associations]
symbol:Ntng2 "netrin G2" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0046658 "anchored to plasma
membrane" evidence=IEA;ISO] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 RGD:1307089 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 EMBL:CH474001
GeneTree:ENSGT00700000104042 CTD:84628 KO:K16359 IPI:IPI00561682
RefSeq:NP_001101295.1 UniGene:Rn.218540 Ensembl:ENSRNOT00000045919
GeneID:311836 KEGG:rno:311836 UCSC:RGD:1307089 NextBio:664255
Uniprot:D4A9F4
Length = 564
Score = 160 (61.4 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 36/97 (37%), Positives = 49/97 (50%)
Query: 65 NCLCNNHST-CVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EG-CRKCDC 115
+C C HS C + + C C T G HCQ+CR G Y N + + E C +C+C
Sbjct: 387 DCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNC 446
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
N G SV C+ TG C C++ G C+ CLP +Y
Sbjct: 447 NQIG-SVHDRCNE-TGFCECREGAVGPKCDDCLPTHY 481
Score = 66 (28.3 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 305 CPENRTCINNQ-CVCPPRRTGPDCQEEIC 332
C TC NQ C CPP G C++ C
Sbjct: 498 CQNGGTCQQNQRCACPPGYAGIRCEQPRC 526
Score = 45 (20.9 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 51 CQCELGWTGVDCSVNCLCN 69
C+CE TG DC C N
Sbjct: 305 CECEHNTTGPDCG-KCKKN 322
>MGI|MGI:99912 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007411 "axon guidance" evidence=IGI]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0032224 "positive
regulation of synaptic transmission, cholinergic" evidence=IMP]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99912 GO:GO:0007411 GO:GO:0030155
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 HOGENOM:HOG000293201
HOVERGEN:HBG052298 GO:GO:0005606 eggNOG:COG0419 EMBL:U12147
EMBL:X69869 EMBL:S75315 IPI:IPI00309999 PIR:I49077
UniGene:Mm.256087 PDB:1DYK PDB:1OKQ PDB:1QU0 PDB:2WJS PDBsum:1DYK
PDBsum:1OKQ PDBsum:1QU0 PDBsum:2WJS ProteinModelPortal:Q60675
SMR:Q60675 STRING:Q60675 PhosphoSite:Q60675 PaxDb:Q60675
PRIDE:Q60675 UCSC:uc007esf.1 ChiTaRS:LAMA2 EvolutionaryTrace:Q60675
CleanEx:MM_LAMA2 Genevestigator:Q60675
GermOnline:ENSMUSG00000019899 Uniprot:Q60675
Length = 3106
Score = 185 (70.2 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 44/136 (32%), Positives = 66/136 (48%)
Query: 37 KCIYGYCKGP--PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+C GY P P SCQ C+ +D S+ C++ S G C C TTG +C
Sbjct: 842 RCAEGYFGQPSVPGGSCQPCQCN-DNLDYSIPGSCDSLS------GSCLICKPGTTGRYC 894
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+ C G +G+A + C+ C C+ +G S C + TG+C C+ N QG++C+ C P +G
Sbjct: 895 ELCADGYFGDAVNTKNCQPCRCDING-SFSEDCHTRTGQCECRPNVQGRHCDECKPETFG 953
Query: 154 DPTDGGTCYYQCMARG 169
G C + G
Sbjct: 954 LQLGRGCLPCNCNSFG 969
Score = 172 (65.6 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 42/121 (34%), Positives = 54/121 (44%)
Query: 64 VNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDCN--SHG 119
V C CN HS+ C +C C T GD C+ C G YG C+ C C S
Sbjct: 1414 VPCQCNGHSSQCDPETSVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCACPLISPS 1473
Query: 120 NSVLGVC--DSITG-ECI-CQDNTQGKNCERCLPGYYGDPTD-GGTCYY-QCMARGMLTG 173
N+ C + + C C +G+ CERC PGY G P+ GG+C +C G L
Sbjct: 1474 NNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPV 1533
Query: 174 P 174
P
Sbjct: 1534 P 1534
Score = 165 (63.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 34/84 (40%), Positives = 45/84 (53%)
Query: 78 IGICDECHDWTTGDHCQYCRAGSYG-NATTQEG-CRKCDCNSHGNSVLGVCDSITGECI- 134
+ +C +C +G C+ C N T G C C C +H + CD ITGEC+
Sbjct: 717 VEVC-QCPPGYSGSSCETCWPRHRRVNGTIFGGICEPCQCFAHAEA----CDDITGECLN 771
Query: 135 CQDNTQGKNCERCLPGYYGDPTDG 158
C+D+T G C CLPG+YGDPT G
Sbjct: 772 CKDHTGGPYCNECLPGFYGDPTRG 795
Score = 163 (62.4 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 44/129 (34%), Positives = 54/129 (41%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG 102
CK P + Q LG + C+ N + C G C C G C C G Y
Sbjct: 947 CK-PETFGLQ--LGRGCLPCNCNSFGSKSFDC-EASGQC-WCQPGVAGKKCDRCAHG-YF 1000
Query: 103 NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY 162
N + GC CDC+ GN+ CD TG+CIC NT G+ C CLP +G G
Sbjct: 1001 NFQ-EGGCIACDCSHLGNN----CDPKTGQCICPPNTTGEKCSECLPNTWGHSIVTGCKV 1055
Query: 163 YQCMARGML 171
C G L
Sbjct: 1056 CNCSTVGSL 1064
Score = 157 (60.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 41/112 (36%), Positives = 51/112 (45%)
Query: 66 CLCNNHSTCVHGI-GICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGN 120
C C H+ I G C C D T G +C C G YG+ T + E C+ C C N N
Sbjct: 753 CQCFAHAEACDDITGECLNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPCACPLNIPSN 812
Query: 121 SVLGVC--DSITGECICQD---NTQGKNCERCLPGYYGDPT-DGGTCY-YQC 165
+ C D G IC + G CERC GY+G P+ GG+C QC
Sbjct: 813 NFSPTCHLDRSLG-LICDECPIGYTGPRCERCAEGYFGQPSVPGGSCQPCQC 863
Score = 155 (59.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGV------DCSVNCLC------NNHS-TCV-HG 77
S+C N C + + G D+ +C LG+ G+ DC C C NN S +CV G
Sbjct: 1430 SVCQN-CQH-HTAG--DFCERCALGYYGIVRGLPNDCQP-CACPLISPSNNFSPSCVLEG 1484
Query: 78 IGI--CDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECI 134
+ C C G +C+ C G G+ ++ G C++C+C+ +G S+ CD +TG C
Sbjct: 1485 LEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYG-SLPVPCDRVTGLCT 1543
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
C+ G+ C+ C + + + C +C G+L G
Sbjct: 1544 CRPGATGRKCDGCEHWHAREGAECVFCGDECT--GLLLG 1580
Score = 127 (49.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 39/141 (27%), Positives = 61/141 (43%)
Query: 38 CIYGYC--KG-PPDYS--CQ-CELGWTGVDCSVNCLCNNHSTCVHGI--GICDECHDWTT 89
C+ G+ KG P+Y CQ C TG S C+ + G+ G C C
Sbjct: 389 CVDGFFRPKGVSPNYPRPCQPCHCDPTG-SLSEVCV-KDEKYAQRGLKPGSC-HCKTGFG 445
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
G +C C G +G C+ C+C+ G++ C G C C++N +G++C RC
Sbjct: 446 GVNCDRCVRGYHG----YPDCQPCNCSGLGSTNEDPC---VGPCSCKENVEGEDCSRCKS 498
Query: 150 GYYGDPTDGGTCYYQCMARGM 170
G++ D +C G+
Sbjct: 499 GFFNLQEDNQKGCEECFCSGV 519
Score = 64 (27.6 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 315 QCVCPPRRTGPDCQEEICPN 334
QC+CPP TG C E + PN
Sbjct: 1025 QCICPPNTTGEKCSECL-PN 1043
Score = 50 (22.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHIT 355
QC C P+ +G C E C + CD L G T
Sbjct: 1074 QCSCHPKFSGMKCSE--CSRGHWNYPLCTLCDCFLPGTDAT 1112
Score = 50 (22.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 286 GKPSEGFNATYQIFSCPDKCPENR---TCINNQCV------CPPRRTGPDCQ 328
G P+ G Q +CP P N TC ++ + CP TGP C+
Sbjct: 790 GDPTRGSPEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDECPIGYTGPRCE 841
Score = 41 (19.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 315 QCVCPPRRTGPDCQ 328
+C CPP +G C+
Sbjct: 1375 RCDCPPGYSGLSCE 1388
Score = 39 (18.8 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 51 CQCELGWTGVDC 62
C C G++G+ C
Sbjct: 1376 CDCPPGYSGLSC 1387
Score = 39 (18.8 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 315 QCVCPPRRTGPDCQE 329
QC C P G C E
Sbjct: 932 QCECRPNVQGRHCDE 946
Score = 38 (18.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 6/16 (37%), Positives = 7/16 (43%)
Query: 312 INNQCVCPPRRTGPDC 327
+ C C P TG C
Sbjct: 1538 VTGLCTCRPGATGRKC 1553
Score = 37 (18.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 12/51 (23%), Positives = 18/51 (35%)
Query: 316 CVC-PPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVD 365
C C P C E C + +C + + GVH R + +D
Sbjct: 1102 CDCFLPGTDATTCDLETRKCSCSDQTGQCSCKVNVEGVHCDRCRPGKFGLD 1152
>RGD|3187 [details] [associations]
symbol:Notch1 "notch 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO;ISS] [GO:0001047 "core promoter binding"
evidence=IEA;ISO;ISS] [GO:0001190 "RNA polymerase II transcription
factor binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA;ISO] [GO:0001669 "acrosomal
vesicle" evidence=IDA] [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0001708 "cell fate specification"
evidence=IEA;ISO] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISO] [GO:0001889 "liver development" evidence=IEA;ISO]
[GO:0001947 "heart looping" evidence=IEA;ISO] [GO:0002040 "sprouting
angiogenesis" evidence=IEA;ISO] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IMP] [GO:0002193
"MAML1-RBP-Jkappa- ICN1 complex" evidence=IEA;ISO] [GO:0002437
"inflammatory response to antigenic stimulus" evidence=IEA;ISO]
[GO:0003157 "endocardium development" evidence=ISO] [GO:0003160
"endocardium morphogenesis" evidence=IEA;ISO] [GO:0003162
"atrioventricular node development" evidence=IEA;ISO] [GO:0003169
"coronary vein morphogenesis" evidence=IEA;ISO] [GO:0003180 "aortic
valve morphogenesis" evidence=IEA;ISO] [GO:0003181 "atrioventricular
valve morphogenesis" evidence=IEA;ISO] [GO:0003184 "pulmonary valve
morphogenesis" evidence=IEA;ISO] [GO:0003192 "mitral valve formation"
evidence=IEA;ISO] [GO:0003198 "epithelial to mesenchymal transition
involved in endocardial cushion formation" evidence=IEA;ISO]
[GO:0003203 "endocardial cushion morphogenesis" evidence=ISO]
[GO:0003207 "cardiac chamber formation" evidence=ISO] [GO:0003208
"cardiac ventricle morphogenesis" evidence=ISO] [GO:0003209 "cardiac
atrium morphogenesis" evidence=ISO] [GO:0003213 "cardiac right atrium
morphogenesis" evidence=IEA;ISO] [GO:0003214 "cardiac left ventricle
morphogenesis" evidence=IEA;ISO] [GO:0003219 "cardiac right ventricle
formation" evidence=IEA;ISO] [GO:0003222 "ventricular trabecula
myocardium morphogenesis" evidence=IEA;ISO] [GO:0003241 "growth
involved in heart morphogenesis" evidence=IEA;ISO] [GO:0003256
"regulation of transcription from RNA polymerase II promoter involved
in myocardial precursor cell differentiation" evidence=IEA;ISO]
[GO:0003264 "regulation of cardioblast proliferation" evidence=IMP]
[GO:0003270 "Notch signaling pathway involved in regulation of
secondary heart field cardioblast proliferation" evidence=IEA;ISO]
[GO:0003273 "cell migration involved in endocardial cushion
formation" evidence=IEA;ISO] [GO:0003344 "pericardium morphogenesis"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0004857 "enzyme inhibitor activity"
evidence=IEA;ISO;ISS] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO;IDA;TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IEA;ISO] [GO:0007219 "Notch signaling
pathway" evidence=ISO;IMP] [GO:0007221 "positive regulation of
transcription of Notch receptor target" evidence=IEA;ISO;IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=ISO] [GO:0007386
"compartment pattern specification" evidence=IEA;ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0007440 "foregut morphogenesis"
evidence=IEA;ISO] [GO:0007492 "endoderm development"
evidence=IEA;ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation" evidence=ISO]
[GO:0008544 "epidermis development" evidence=ISO] [GO:0009790 "embryo
development" evidence=IDA] [GO:0009912 "auditory receptor cell fate
commitment" evidence=IEA;ISO] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0010001 "glial cell differentiation"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010718 "positive regulation of epithelial to
mesenchymal transition" evidence=IEA;ISO] [GO:0010812 "negative
regulation of cell-substrate adhesion" evidence=IEA;ISO] [GO:0010832
"negative regulation of myotube differentiation"
evidence=IEA;ISO;ISS] [GO:0014031 "mesenchymal cell development"
evidence=ISO] [GO:0014807 "regulation of somitogenesis"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA;ISO;ISS] [GO:0021515 "cell
differentiation in spinal cord" evidence=IEP] [GO:0021915 "neural
tube development" evidence=IEA;ISO] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0030216 "keratinocyte differentiation"
evidence=IEA;ISO] [GO:0030279 "negative regulation of ossification"
evidence=IEA;ISO] [GO:0030324 "lung development" evidence=IEA;ISO]
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO] [GO:0030334
"regulation of cell migration" evidence=ISO] [GO:0030335 "positive
regulation of cell migration" evidence=IEA;ISO] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA;ISO;ISS]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=IEA;ISO] [GO:0031069 "hair follicle morphogenesis"
evidence=IEA;ISO] [GO:0031100 "organ regeneration" evidence=IEP]
[GO:0031490 "chromatin DNA binding" evidence=IEA;ISO] [GO:0031960
"response to corticosteroid stimulus" evidence=IEP] [GO:0032495
"response to muramyl dipeptide" evidence=IEA;ISO] [GO:0032496
"response to lipopolysaccharide" evidence=IEP] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA;ISO] [GO:0035914 "skeletal
muscle cell differentiation" evidence=ISO] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:0042246 "tissue regeneration"
evidence=IEP] [GO:0042640 "anagen" evidence=IEA;ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process" evidence=ISO]
[GO:0043086 "negative regulation of catalytic activity"
evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045165 "cell fate commitment" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=ISO] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0045618 "positive regulation of
keratinocyte differentiation" evidence=IEA;ISO] [GO:0045662 "negative
regulation of myoblast differentiation" evidence=IEA;ISO] [GO:0045665
"negative regulation of neuron differentiation" evidence=ISO;IMP]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA;ISO] [GO:0045687 "positive regulation of glial cell
differentiation" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=ISO;IMP] [GO:0045955 "negative regulation of
calcium ion-dependent exocytosis" evidence=IEA;ISO] [GO:0046427
"positive regulation of JAK-STAT cascade" evidence=IEA;ISO;ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=IEA;ISO] [GO:0048103 "somatic stem cell
division" evidence=IEA;ISO] [GO:0048663 "neuron fate commitment"
evidence=ISO] [GO:0048708 "astrocyte differentiation" evidence=IDA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEP]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA;ISO;ISS] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA;ISO;ISS] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IEA;ISO]
[GO:0050678 "regulation of epithelial cell proliferation"
evidence=ISO] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA;ISO] [GO:0050767 "regulation of
neurogenesis" evidence=ISO] [GO:0050768 "negative regulation of
neurogenesis" evidence=ISO;ISS] [GO:0055008 "cardiac muscle tissue
morphogenesis" evidence=ISO] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA;ISO] [GO:0060045 "positive regulation of
cardiac muscle cell proliferation" evidence=IEA;ISO] [GO:0060253
"negative regulation of glial cell proliferation"
evidence=IEA;ISO;ISS] [GO:0060317 "cardiac epithelial to mesenchymal
transition" evidence=ISO] [GO:0060411 "cardiac septum morphogenesis"
evidence=ISO] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA;ISO] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IEA;ISO] [GO:0060548 "negative regulation of
cell death" evidence=ISO] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IEA;ISO] [GO:0060768 "regulation of
epithelial cell proliferation involved in prostate gland development"
evidence=IEA;ISO] [GO:0060842 "arterial endothelial cell
differentiation" evidence=IEA;ISO] [GO:0060843 "venous endothelial
cell differentiation" evidence=IEA;ISO] [GO:0060948 "cardiac vascular
smooth muscle cell development" evidence=IEA;ISO] [GO:0060956
"endocardial cell differentiation" evidence=IEA;ISO] [GO:0060979
"vasculogenesis involved in coronary vascular morphogenesis"
evidence=IEA;ISO] [GO:0060982 "coronary artery morphogenesis"
evidence=IEA;ISO] [GO:0061314 "Notch signaling involved in heart
development" evidence=ISO] [GO:0061384 "heart trabecula
morphogenesis" evidence=ISO] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to hypoxia"
evidence=IEA;ISO;ISS] [GO:0070986 "left/right axis specification"
evidence=IEA;ISO] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEA;ISO] [GO:0072017
"distal tubule development" evidence=IEA] [GO:0072044 "collecting
duct development" evidence=IEA] [GO:0072144 "glomerular mesangial
cell development" evidence=IEA] [GO:0072602 "interleukin-4 secretion"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:0097150 "neuronal
stem cell maintenance" evidence=IEA;ISO] [GO:1901201 "regulation of
extracellular matrix assembly" evidence=IEA;ISO] [GO:2000737
"negative regulation of stem cell differentiation" evidence=IEA;ISO]
[GO:2000811 "negative regulation of anoikis" evidence=IEA;ISO]
[GO:2000974 "negative regulation of pro-B cell differentiation"
evidence=ISO;ISS] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 RGD:3187 GO:GO:0016021
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 Reactome:REACT_111984
eggNOG:COG0666 GO:GO:0031100 GO:GO:0004857 GO:GO:0001669
GO:GO:0032496 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045665 GO:GO:0005509
GO:GO:0004872 GO:GO:0007283 GO:GO:0006351 GO:GO:0019899
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122 GO:GO:0009790
GO:GO:0072144 GO:GO:0030513 GO:GO:0045603 GO:GO:0010718
PROSITE:PS01186 GO:GO:0042246 GO:GO:0001047 GO:GO:0046427
PROSITE:PS00010 GO:GO:0003160 GO:GO:0010812 GO:GO:0072044
GO:GO:0072017 GO:GO:0048709 GO:GO:0045668 GO:GO:0002052 GO:GO:2000811
GO:GO:0010832 GO:GO:0048711 GO:GO:0045662 GO:GO:0048715 GO:GO:0030514
GO:GO:0032495 GO:GO:0031960 GO:GO:0021515 GO:GO:0097150 GO:GO:0003180
GO:GO:0060253 SUPFAM:SSF90193 GO:GO:0048708 GO:GO:2000974
GO:GO:2000737 GO:GO:0061419 GO:GO:0002193 HOGENOM:HOG000234369
HOVERGEN:HBG052650 InterPro:IPR024600 Pfam:PF11936 OrthoDB:EOG4HX504
GO:GO:0007221 GO:GO:0003264 EMBL:X57405 IPI:IPI00766721 PIR:S18188
UniGene:Rn.25046 ProteinModelPortal:Q07008 SMR:Q07008 STRING:Q07008
PRIDE:Q07008 UCSC:RGD:3187 InParanoid:Q07008 ArrayExpress:Q07008
Genevestigator:Q07008 GermOnline:ENSRNOG00000019322 Uniprot:Q07008
Length = 2531
Score = 195 (73.7 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 87/328 (26%), Positives = 122/328 (37%)
Query: 36 NKCIYGYCK-GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
N CI+G C+ G Y C C GW+G +C +N + CV+G G C D T+G C
Sbjct: 723 NPCIHGACRDGLNGYKCDCAPGWSGTNCDINNNECESNPCVNG-GTCK---DMTSGYVCT 778
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYY 152
CR G + Q +C N N G C D + G +C C G CE L
Sbjct: 779 -CREG-FSGPNCQTNINECASNPCLNQ--GTCIDDVAGYKCNCPLPYTGATCEVVLAPCA 834
Query: 153 GDPT-DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNS 211
P + G C + + P G E + E +P R +
Sbjct: 835 TSPCKNSGVCK-ESEDYESFSCVCPTGWQGQTCEIDINECVKSPCRHGASCQNTNGSYRC 893
Query: 212 TAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEV 271
A + DI+ C N + D V + G FC ED++
Sbjct: 894 LCQAGYTGRNCESDID-DCRPNPCHNGGSCTDGVNAAFCDCLPGFQGAFCEEDINE-CAT 951
Query: 272 LEAKSGVMTIH----YKQGKPSEGFNATYQIFSCPD----KCPENRTCINN----QCVCP 319
++G Y P+ GFN + + PD C TC++ C+CP
Sbjct: 952 NPCQNGANCTDCVDSYTCTCPT-GFNGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCP 1010
Query: 320 PRRTGPDCQEEICPNECHE--FLNHGTC 345
P TG CQ ++ NEC L+ GTC
Sbjct: 1011 PGFTGSYCQYDV--NECDSRPCLHGGTC 1036
Score = 144 (55.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 50/152 (32%), Positives = 65/152 (42%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC 93
N C G C D Y C CE G+TG C+VN C S C +G G C+ D G C
Sbjct: 648 NPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAG-SPCHNG-GTCE---DGIAGFTC 702
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGY 151
+ C G Y + T +C+ N + G C D + G +C C G NC+
Sbjct: 703 R-CPEG-YHDPTCLSEVNECNSNP---CIHGACRDGLNGYKCDCAPGWSGTNCDINNNEC 757
Query: 152 YGDP-TDGGTCY-----YQCMARGMLTGPGPQ 177
+P +GGTC Y C R +GP Q
Sbjct: 758 ESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQ 789
Score = 140 (54.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 93/365 (25%), Positives = 131/365 (35%)
Query: 21 CTVLLLYIFNASLCYNKCIYGYCKGPPDY---SCQCELGWTGVDCSVNCLCNNHSTCVHG 77
C V+L S C N G CK DY SC C GW G C ++ S C HG
Sbjct: 826 CEVVLAPCAT-SPCKNS---GVCKESEDYESFSCVCPTGWQGQTCEIDINECVKSPCRHG 881
Query: 78 IGICDECHDWTTGDHCQYCRAGSYG-NATTQ-EGCRKCDCNSHGNSVLGVCDSITGECIC 135
C + T G + C+AG G N + + CR C++ G+ GV + C C
Sbjct: 882 AS----CQN-TNGSYRCLCQAGYTGRNCESDIDDCRPNPCHNGGSCTDGVNAAF---CDC 933
Query: 136 QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTP 195
QG CE + +P G C+ T P G E N D
Sbjct: 934 LPGFQGAFCEEDINECATNPCQNGANCTDCV--DSYTCTCPTGFNGIHCENNT---PDCT 988
Query: 196 SRECLWIIGQSLDS-NS---TAPADIILLRLQPDINVPCNENAVYIYDGL-PDFVTSVGG 250
C + G +D NS P Q D+N C+ ++ G D +
Sbjct: 989 ESSC-FNGGTCVDGINSFTCLCPPGFTGSYCQYDVN-ECDSRPC-LHGGTCQDSYGTYKC 1045
Query: 251 THQSTTLGVFCTEDMHRGYEVLEAKSG-----VMTIHYKQGKPS-EGFNATYQIFSCP-- 302
T G+ C +++ R + K+G T ++ + + GFN SC
Sbjct: 1046 TCPQGYTGLNC-QNLVRWCDSAPCKNGGKCWQTNTQYHCECRSGWTGFNCDVLSVSCEVA 1104
Query: 303 -DK--------CPENRTCINNQ----CVCPPRRTGPDCQEEI--C-PNECHEFLNHGTCD 346
K C C++ + C C TG C++E+ C PN C N TC
Sbjct: 1105 AQKRGIDVTLLCQHGGLCVDEEDKHYCHCQAGYTGSYCEDEVDECSPNPCQ---NGATCT 1161
Query: 347 LLLTG 351
L G
Sbjct: 1162 DYLGG 1166
Score = 135 (52.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 48/151 (31%), Positives = 59/151 (39%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KC+ GP Y+C C G+TG C V+ + C H IG+C D
Sbjct: 537 CKNGAKCL----DGPNTYTCVCTEGYTGTHCEVDIDECDPDPC-H-IGLCK---DGVATF 587
Query: 92 HCQYCRAGSYGN--ATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERC 147
C C+ G G+ T C C HG G C C+C T G NCE
Sbjct: 588 TC-LCQPGYTGHHCETNINECHSQPCR-HG----GTCQDRDNYYLCLCLKGTTGPNCEIN 641
Query: 148 LPGYYGDPTDGGTCY-----YQCMARGMLTG 173
L +P D GTC Y+C TG
Sbjct: 642 LDDCASNPCDSGTCLDKIDGYECACEPGYTG 672
Score = 129 (50.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 82/321 (25%), Positives = 118/321 (36%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+ C+C G TG+ C +N C ++ C G CD + G C G G A +Q+
Sbjct: 357 FYCECPHGRTGLLCHLNDACISNP-CNEGSN-CDT--NPVNGKAICTCPRGYTGPACSQD 412
Query: 109 GCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQC 165
+C ++ G C + G EC C G CE + +P TC Q
Sbjct: 413 -VDECALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQI 471
Query: 166 MARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDS-NS---TAPADIILLR 221
+ PG +G+ E N E +P CL G+ +D N P
Sbjct: 472 GEFQCICMPGYEGV---YCEINTDECASSP---CLHN-GRCVDKINEFLCQCPKGFSGHL 524
Query: 222 LQPDIN----VPCNENAVYIYDGLPDFVTSV---G--GTHQSTTLGVFCTEDMHRGYEVL 272
Q D++ PC +N DG P+ T V G GTH + + H G
Sbjct: 525 CQYDVDECASTPC-KNGAKCLDG-PNTYTCVCTEGYTGTHCEVDIDECDPDPCHIGL--- 579
Query: 273 EAKSGVMTIHYKQGKPSEGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDC 327
K GV T G + I C + C TC + C+C TGP+C
Sbjct: 580 -CKDGVATFTCLCQPGYTGHHCETNINECHSQPCRHGGTCQDRDNYYLCLCLKGTTGPNC 638
Query: 328 Q---EEICPNECHEFLNHGTC 345
+ ++ N C + GTC
Sbjct: 639 EINLDDCASNPC----DSGTC 655
Score = 124 (48.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 87/340 (25%), Positives = 128/340 (37%)
Query: 36 NKCIYG-YC-KGPPDYSCQCELGWTGVDCSVN---C-----LCNNHSTC--VHGIGICDE 83
N C G C G Y+C+C WTG C+ + C C N TC HG C
Sbjct: 264 NNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNAGTCHNSHGGYNCVC 323
Query: 84 CHDWTTGDHCQY----CR-AGSYGNATTQEGCRK--CDCNSHGNSVLGVCDSITGECICQ 136
+ WT G+ C C A + AT + C+C HG + L +C + CI
Sbjct: 324 VNGWT-GEDCSDNIDDCASAACFQGATCHDRVASFYCEC-PHGRTGL-LCH-LNDACISN 379
Query: 137 DNTQGKNCERCLPGYYGDPTDG-GTCYYQCMARGMLTGPG-PQGLGSGLAERNAWEGKDT 194
+G NC+ +P +G C C RG TGP Q + N E
Sbjct: 380 PCNEGSNCDT-------NPVNGKAIC--TC-PRGY-TGPACSQDVDECALGANPCEH--- 425
Query: 195 PSRECLWIIG----QSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGG 250
+ +CL +G Q L + +I + I+ PC +A + D + +F
Sbjct: 426 -AGKCLNTLGSFECQCLQGYTGPRCEI---DVNECISNPCQNDATCL-DQIGEFQCICMP 480
Query: 251 THQSTTLGVFC--TEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNA---TYQIFSCPDK- 304
++ GV+C D L V I+ + +GF+ Y + C
Sbjct: 481 GYE----GVYCEINTDECASSPCLHNGRCVDKINEFLCQCPKGFSGHLCQYDVDECASTP 536
Query: 305 CPENRTCINNQ----CVCPPRRTGPDCQEEI--C-PNECH 337
C C++ CVC TG C+ +I C P+ CH
Sbjct: 537 CKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCH 576
Score = 122 (48.0 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 74/302 (24%), Positives = 102/302 (33%)
Query: 49 YSCQCELGWTGVDC---SVNCLCNNHST-------CVHGIGICDECHDWTTGDHCQYCRA 98
Y C+C GWTG +C SV+C C HG G+C + D H +C+A
Sbjct: 1081 YHCECRSGWTGFNCDVLSVSCEVAAQKRGIDVTLLCQHG-GLCVDEED----KHYCHCQA 1135
Query: 99 GSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT 156
G Y + ++ +C N N C G C C G NC + P
Sbjct: 1136 G-YTGSYCEDEVDECSPNPCQNGA--TCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPC 1192
Query: 157 -DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSR--ECL---WIIGQSLDSN 210
+GGTC G QG+ + + D SR +C + Q
Sbjct: 1193 QNGGTCIDLTNTYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGGYT 1252
Query: 211 STAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYE 270
T P + R + D+N C N G + V V H G H G
Sbjct: 1253 CTCPPGFVGERCEGDVN-ECLSNPCDPR-GTQNCVQRVNDFHCECRAG-------HTGRR 1303
Query: 271 VLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCP---ENRTCINNQCVCPPRR--TGP 325
+G + G + T + F C +CP E TC N+ C R G
Sbjct: 1304 CESVINGCRGKPCRNGGVCAVASNTARGFIC--RCPARFEGATCENDARTCGSLRCLNGG 1361
Query: 326 DC 327
C
Sbjct: 1362 TC 1363
Score = 110 (43.8 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 49/158 (31%), Positives = 64/158 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSV---N-CLCNNHSTCVHGIGICDECH 85
NA CY +G G DY+C C LG++G C N CL N C +G G CD
Sbjct: 70 NAGTCY-VVDHG---GIVDYACSCPLGFSGPLCLTPLANACLAN---PCRNG-GTCDLLT 121
Query: 86 DWTTGDHCQYCRAGSYGNATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
T C+ C G G + Q + C C ++G L S C C G C
Sbjct: 122 --LTEYKCR-CPPGWSGKSCQQADPCASNPC-ANGGQCLPFESSYI--CGCPPGFHGPTC 175
Query: 145 ERCLPGYYGDP---TDGGTCY-----YQCMARGMLTGP 174
+ + +P GGTC+ Y+C R TGP
Sbjct: 176 RQDVNECSQNPGLCRHGGTCHNEIGSYRCACRATHTGP 213
Score = 86 (35.3 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 22/65 (33%), Positives = 28/65 (43%)
Query: 291 GFNATYQIFSCP-DKCPENRTCINN----QCVCPPRRTGPDCQEEI--C---PNECHEFL 340
G N + CP + C C++ C CPP TG C E++ C PN C
Sbjct: 251 GQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQ--- 307
Query: 341 NHGTC 345
N GTC
Sbjct: 308 NAGTC 312
Score = 82 (33.9 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 36/130 (27%), Positives = 50/130 (38%)
Query: 258 GVFCTEDMHRGYEVLEAKSGVMTIH----YKQGKPSEGFNATYQIFSCPD----KCPENR 309
G FC ED++ ++G Y P+ GFN + + PD C
Sbjct: 939 GAFCEEDINE-CATNPCQNGANCTDCVDSYTCTCPT-GFNGIHCENNTPDCTESSCFNGG 996
Query: 310 TCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVD 365
TC++ C+CPP TG CQ ++ NEC + C HG T
Sbjct: 997 TCVDGINSFTCLCPPGFTGSYCQYDV--NEC----DSRPC---------LHGGTCQDSYG 1041
Query: 366 LIRCTCRQVY 375
+CTC Q Y
Sbjct: 1042 TYKCTCPQGY 1051
Score = 72 (30.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 24/71 (33%), Positives = 31/71 (43%)
Query: 291 GFNATY---QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFL 340
G+ +Y ++ C P+ C TC + C C G +C EEI NEC
Sbjct: 1136 GYTGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEI--NECLSQPCQ 1193
Query: 341 NHGTC-DLLLT 350
N GTC DL T
Sbjct: 1194 NGGTCIDLTNT 1204
Score = 69 (29.3 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 304 KCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC 336
KC N TC++ C CPP G C+ ++ NEC
Sbjct: 1237 KCFNNGTCVDQVGGYTCTCPPGFVGERCEGDV--NEC 1271
Score = 69 (29.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 302 PDKCPENRTC-----INNQCVCPPRRTGPDCQEEI--CP-NECHEFLNHGTC 345
P C TC ++C C P G +C+E + CP N C N G C
Sbjct: 224 PSPCQNGGTCRPTGDTTHECACLPGFAGQNCEENVDDCPGNNCK---NGGAC 272
Score = 66 (28.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 21/67 (31%), Positives = 28/67 (41%)
Query: 290 EGFNATYQIFSCPD-KCPENRTCINNQ----CVCPPRRTGPDCQ---EEIC--PNECHEF 339
EG +C +C TCI+ C+C TGP+CQ C N C+
Sbjct: 1341 EGATCENDARTCGSLRCLNGGTCISGPRSPTCLCLGSFTGPECQFPASSPCVGSNPCY-- 1398
Query: 340 LNHGTCD 346
N GTC+
Sbjct: 1399 -NQGTCE 1404
Score = 58 (25.5 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
+C C P +G +C +I NEC +N GTC + +G
Sbjct: 738 KCDCAPGWSGTNC--DINNNECESNPCVNGGTCKDMTSG 774
Score = 53 (23.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 15/46 (32%), Positives = 18/46 (39%)
Query: 305 CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEF-LNHGTC 345
C TC + C CP P C E+ NEC+ HG C
Sbjct: 687 CHNGGTCEDGIAGFTCRCPEGYHDPTCLSEV--NECNSNPCIHGAC 730
Score = 51 (23.0 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C CP R G C+ + LN GTC
Sbjct: 1334 CRCPARFEGATCENDARTCGSLRCLNGGTC 1363
Score = 39 (18.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 325 PDCQEEICPNECHEFLNHGTC 345
P+CQE+ C+ N+ C
Sbjct: 1452 PECQEDAGNKVCNLQCNNHAC 1472
>UNIPROTKB|Q07008 [details] [associations]
symbol:Notch1 "Neurogenic locus notch homolog protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:2000974 "negative regulation of
pro-B cell differentiation" evidence=ISS] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
RGD:3187 GO:GO:0016021 GO:GO:0005886 GO:GO:0005634 GO:GO:0005794
Reactome:REACT_111984 eggNOG:COG0666 GO:GO:0031100 GO:GO:0004857
GO:GO:0001669 GO:GO:0032496 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045665
GO:GO:0005509 GO:GO:0004872 GO:GO:0007283 GO:GO:0006351
GO:GO:0019899 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122
GO:GO:0009790 GO:GO:0072144 GO:GO:0030513 GO:GO:0045603
GO:GO:0010718 PROSITE:PS01186 GO:GO:0042246 GO:GO:0001047
GO:GO:0046427 PROSITE:PS00010 GO:GO:0003160 GO:GO:0010812
GO:GO:0072044 GO:GO:0072017 GO:GO:0048709 GO:GO:0045668
GO:GO:0002052 GO:GO:2000811 GO:GO:0010832 GO:GO:0048711
GO:GO:0045662 GO:GO:0048715 GO:GO:0030514 GO:GO:0032495
GO:GO:0031960 GO:GO:0021515 GO:GO:0097150 GO:GO:0003180
GO:GO:0060253 SUPFAM:SSF90193 GO:GO:0048708 GO:GO:2000974
GO:GO:2000737 GO:GO:0061419 GO:GO:0002193 HOGENOM:HOG000234369
HOVERGEN:HBG052650 InterPro:IPR024600 Pfam:PF11936
OrthoDB:EOG4HX504 GO:GO:0007221 GO:GO:0003264 EMBL:X57405
IPI:IPI00766721 PIR:S18188 UniGene:Rn.25046
ProteinModelPortal:Q07008 SMR:Q07008 STRING:Q07008 PRIDE:Q07008
UCSC:RGD:3187 InParanoid:Q07008 ArrayExpress:Q07008
Genevestigator:Q07008 GermOnline:ENSRNOG00000019322 Uniprot:Q07008
Length = 2531
Score = 195 (73.7 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 87/328 (26%), Positives = 122/328 (37%)
Query: 36 NKCIYGYCK-GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
N CI+G C+ G Y C C GW+G +C +N + CV+G G C D T+G C
Sbjct: 723 NPCIHGACRDGLNGYKCDCAPGWSGTNCDINNNECESNPCVNG-GTCK---DMTSGYVCT 778
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYY 152
CR G + Q +C N N G C D + G +C C G CE L
Sbjct: 779 -CREG-FSGPNCQTNINECASNPCLNQ--GTCIDDVAGYKCNCPLPYTGATCEVVLAPCA 834
Query: 153 GDPT-DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNS 211
P + G C + + P G E + E +P R +
Sbjct: 835 TSPCKNSGVCK-ESEDYESFSCVCPTGWQGQTCEIDINECVKSPCRHGASCQNTNGSYRC 893
Query: 212 TAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEV 271
A + DI+ C N + D V + G FC ED++
Sbjct: 894 LCQAGYTGRNCESDID-DCRPNPCHNGGSCTDGVNAAFCDCLPGFQGAFCEEDINE-CAT 951
Query: 272 LEAKSGVMTIH----YKQGKPSEGFNATYQIFSCPD----KCPENRTCINN----QCVCP 319
++G Y P+ GFN + + PD C TC++ C+CP
Sbjct: 952 NPCQNGANCTDCVDSYTCTCPT-GFNGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCP 1010
Query: 320 PRRTGPDCQEEICPNECHE--FLNHGTC 345
P TG CQ ++ NEC L+ GTC
Sbjct: 1011 PGFTGSYCQYDV--NECDSRPCLHGGTC 1036
Score = 144 (55.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 50/152 (32%), Positives = 65/152 (42%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC 93
N C G C D Y C CE G+TG C+VN C S C +G G C+ D G C
Sbjct: 648 NPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAG-SPCHNG-GTCE---DGIAGFTC 702
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGY 151
+ C G Y + T +C+ N + G C D + G +C C G NC+
Sbjct: 703 R-CPEG-YHDPTCLSEVNECNSNP---CIHGACRDGLNGYKCDCAPGWSGTNCDINNNEC 757
Query: 152 YGDP-TDGGTCY-----YQCMARGMLTGPGPQ 177
+P +GGTC Y C R +GP Q
Sbjct: 758 ESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQ 789
Score = 140 (54.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 93/365 (25%), Positives = 131/365 (35%)
Query: 21 CTVLLLYIFNASLCYNKCIYGYCKGPPDY---SCQCELGWTGVDCSVNCLCNNHSTCVHG 77
C V+L S C N G CK DY SC C GW G C ++ S C HG
Sbjct: 826 CEVVLAPCAT-SPCKNS---GVCKESEDYESFSCVCPTGWQGQTCEIDINECVKSPCRHG 881
Query: 78 IGICDECHDWTTGDHCQYCRAGSYG-NATTQ-EGCRKCDCNSHGNSVLGVCDSITGECIC 135
C + T G + C+AG G N + + CR C++ G+ GV + C C
Sbjct: 882 AS----CQN-TNGSYRCLCQAGYTGRNCESDIDDCRPNPCHNGGSCTDGVNAAF---CDC 933
Query: 136 QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTP 195
QG CE + +P G C+ T P G E N D
Sbjct: 934 LPGFQGAFCEEDINECATNPCQNGANCTDCV--DSYTCTCPTGFNGIHCENNT---PDCT 988
Query: 196 SRECLWIIGQSLDS-NS---TAPADIILLRLQPDINVPCNENAVYIYDGL-PDFVTSVGG 250
C + G +D NS P Q D+N C+ ++ G D +
Sbjct: 989 ESSC-FNGGTCVDGINSFTCLCPPGFTGSYCQYDVN-ECDSRPC-LHGGTCQDSYGTYKC 1045
Query: 251 THQSTTLGVFCTEDMHRGYEVLEAKSG-----VMTIHYKQGKPS-EGFNATYQIFSCP-- 302
T G+ C +++ R + K+G T ++ + + GFN SC
Sbjct: 1046 TCPQGYTGLNC-QNLVRWCDSAPCKNGGKCWQTNTQYHCECRSGWTGFNCDVLSVSCEVA 1104
Query: 303 -DK--------CPENRTCINNQ----CVCPPRRTGPDCQEEI--C-PNECHEFLNHGTCD 346
K C C++ + C C TG C++E+ C PN C N TC
Sbjct: 1105 AQKRGIDVTLLCQHGGLCVDEEDKHYCHCQAGYTGSYCEDEVDECSPNPCQ---NGATCT 1161
Query: 347 LLLTG 351
L G
Sbjct: 1162 DYLGG 1166
Score = 135 (52.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 48/151 (31%), Positives = 59/151 (39%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KC+ GP Y+C C G+TG C V+ + C H IG+C D
Sbjct: 537 CKNGAKCL----DGPNTYTCVCTEGYTGTHCEVDIDECDPDPC-H-IGLCK---DGVATF 587
Query: 92 HCQYCRAGSYGN--ATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERC 147
C C+ G G+ T C C HG G C C+C T G NCE
Sbjct: 588 TC-LCQPGYTGHHCETNINECHSQPCR-HG----GTCQDRDNYYLCLCLKGTTGPNCEIN 641
Query: 148 LPGYYGDPTDGGTCY-----YQCMARGMLTG 173
L +P D GTC Y+C TG
Sbjct: 642 LDDCASNPCDSGTCLDKIDGYECACEPGYTG 672
Score = 129 (50.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 82/321 (25%), Positives = 118/321 (36%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+ C+C G TG+ C +N C ++ C G CD + G C G G A +Q+
Sbjct: 357 FYCECPHGRTGLLCHLNDACISNP-CNEGSN-CDT--NPVNGKAICTCPRGYTGPACSQD 412
Query: 109 GCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQC 165
+C ++ G C + G EC C G CE + +P TC Q
Sbjct: 413 -VDECALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQI 471
Query: 166 MARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDS-NS---TAPADIILLR 221
+ PG +G+ E N E +P CL G+ +D N P
Sbjct: 472 GEFQCICMPGYEGV---YCEINTDECASSP---CLHN-GRCVDKINEFLCQCPKGFSGHL 524
Query: 222 LQPDIN----VPCNENAVYIYDGLPDFVTSV---G--GTHQSTTLGVFCTEDMHRGYEVL 272
Q D++ PC +N DG P+ T V G GTH + + H G
Sbjct: 525 CQYDVDECASTPC-KNGAKCLDG-PNTYTCVCTEGYTGTHCEVDIDECDPDPCHIGL--- 579
Query: 273 EAKSGVMTIHYKQGKPSEGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDC 327
K GV T G + I C + C TC + C+C TGP+C
Sbjct: 580 -CKDGVATFTCLCQPGYTGHHCETNINECHSQPCRHGGTCQDRDNYYLCLCLKGTTGPNC 638
Query: 328 Q---EEICPNECHEFLNHGTC 345
+ ++ N C + GTC
Sbjct: 639 EINLDDCASNPC----DSGTC 655
Score = 124 (48.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 87/340 (25%), Positives = 128/340 (37%)
Query: 36 NKCIYG-YC-KGPPDYSCQCELGWTGVDCSVN---C-----LCNNHSTC--VHGIGICDE 83
N C G C G Y+C+C WTG C+ + C C N TC HG C
Sbjct: 264 NNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNAGTCHNSHGGYNCVC 323
Query: 84 CHDWTTGDHCQY----CR-AGSYGNATTQEGCRK--CDCNSHGNSVLGVCDSITGECICQ 136
+ WT G+ C C A + AT + C+C HG + L +C + CI
Sbjct: 324 VNGWT-GEDCSDNIDDCASAACFQGATCHDRVASFYCEC-PHGRTGL-LCH-LNDACISN 379
Query: 137 DNTQGKNCERCLPGYYGDPTDG-GTCYYQCMARGMLTGPG-PQGLGSGLAERNAWEGKDT 194
+G NC+ +P +G C C RG TGP Q + N E
Sbjct: 380 PCNEGSNCDT-------NPVNGKAIC--TC-PRGY-TGPACSQDVDECALGANPCEH--- 425
Query: 195 PSRECLWIIG----QSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGG 250
+ +CL +G Q L + +I + I+ PC +A + D + +F
Sbjct: 426 -AGKCLNTLGSFECQCLQGYTGPRCEI---DVNECISNPCQNDATCL-DQIGEFQCICMP 480
Query: 251 THQSTTLGVFC--TEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNA---TYQIFSCPDK- 304
++ GV+C D L V I+ + +GF+ Y + C
Sbjct: 481 GYE----GVYCEINTDECASSPCLHNGRCVDKINEFLCQCPKGFSGHLCQYDVDECASTP 536
Query: 305 CPENRTCINNQ----CVCPPRRTGPDCQEEI--C-PNECH 337
C C++ CVC TG C+ +I C P+ CH
Sbjct: 537 CKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCH 576
Score = 122 (48.0 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 74/302 (24%), Positives = 102/302 (33%)
Query: 49 YSCQCELGWTGVDC---SVNCLCNNHST-------CVHGIGICDECHDWTTGDHCQYCRA 98
Y C+C GWTG +C SV+C C HG G+C + D H +C+A
Sbjct: 1081 YHCECRSGWTGFNCDVLSVSCEVAAQKRGIDVTLLCQHG-GLCVDEED----KHYCHCQA 1135
Query: 99 GSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT 156
G Y + ++ +C N N C G C C G NC + P
Sbjct: 1136 G-YTGSYCEDEVDECSPNPCQNGA--TCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPC 1192
Query: 157 -DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSR--ECL---WIIGQSLDSN 210
+GGTC G QG+ + + D SR +C + Q
Sbjct: 1193 QNGGTCIDLTNTYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGGYT 1252
Query: 211 STAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYE 270
T P + R + D+N C N G + V V H G H G
Sbjct: 1253 CTCPPGFVGERCEGDVN-ECLSNPCDPR-GTQNCVQRVNDFHCECRAG-------HTGRR 1303
Query: 271 VLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCP---ENRTCINNQCVCPPRR--TGP 325
+G + G + T + F C +CP E TC N+ C R G
Sbjct: 1304 CESVINGCRGKPCRNGGVCAVASNTARGFIC--RCPARFEGATCENDARTCGSLRCLNGG 1361
Query: 326 DC 327
C
Sbjct: 1362 TC 1363
Score = 110 (43.8 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 49/158 (31%), Positives = 64/158 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSV---N-CLCNNHSTCVHGIGICDECH 85
NA CY +G G DY+C C LG++G C N CL N C +G G CD
Sbjct: 70 NAGTCY-VVDHG---GIVDYACSCPLGFSGPLCLTPLANACLAN---PCRNG-GTCDLLT 121
Query: 86 DWTTGDHCQYCRAGSYGNATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
T C+ C G G + Q + C C ++G L S C C G C
Sbjct: 122 --LTEYKCR-CPPGWSGKSCQQADPCASNPC-ANGGQCLPFESSYI--CGCPPGFHGPTC 175
Query: 145 ERCLPGYYGDP---TDGGTCY-----YQCMARGMLTGP 174
+ + +P GGTC+ Y+C R TGP
Sbjct: 176 RQDVNECSQNPGLCRHGGTCHNEIGSYRCACRATHTGP 213
Score = 86 (35.3 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 22/65 (33%), Positives = 28/65 (43%)
Query: 291 GFNATYQIFSCP-DKCPENRTCINN----QCVCPPRRTGPDCQEEI--C---PNECHEFL 340
G N + CP + C C++ C CPP TG C E++ C PN C
Sbjct: 251 GQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQ--- 307
Query: 341 NHGTC 345
N GTC
Sbjct: 308 NAGTC 312
Score = 82 (33.9 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 36/130 (27%), Positives = 50/130 (38%)
Query: 258 GVFCTEDMHRGYEVLEAKSGVMTIH----YKQGKPSEGFNATYQIFSCPD----KCPENR 309
G FC ED++ ++G Y P+ GFN + + PD C
Sbjct: 939 GAFCEEDINE-CATNPCQNGANCTDCVDSYTCTCPT-GFNGIHCENNTPDCTESSCFNGG 996
Query: 310 TCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVD 365
TC++ C+CPP TG CQ ++ NEC + C HG T
Sbjct: 997 TCVDGINSFTCLCPPGFTGSYCQYDV--NEC----DSRPC---------LHGGTCQDSYG 1041
Query: 366 LIRCTCRQVY 375
+CTC Q Y
Sbjct: 1042 TYKCTCPQGY 1051
Score = 72 (30.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 24/71 (33%), Positives = 31/71 (43%)
Query: 291 GFNATY---QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFL 340
G+ +Y ++ C P+ C TC + C C G +C EEI NEC
Sbjct: 1136 GYTGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEI--NECLSQPCQ 1193
Query: 341 NHGTC-DLLLT 350
N GTC DL T
Sbjct: 1194 NGGTCIDLTNT 1204
Score = 69 (29.3 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 304 KCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC 336
KC N TC++ C CPP G C+ ++ NEC
Sbjct: 1237 KCFNNGTCVDQVGGYTCTCPPGFVGERCEGDV--NEC 1271
Score = 69 (29.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 302 PDKCPENRTC-----INNQCVCPPRRTGPDCQEEI--CP-NECHEFLNHGTC 345
P C TC ++C C P G +C+E + CP N C N G C
Sbjct: 224 PSPCQNGGTCRPTGDTTHECACLPGFAGQNCEENVDDCPGNNCK---NGGAC 272
Score = 66 (28.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 21/67 (31%), Positives = 28/67 (41%)
Query: 290 EGFNATYQIFSCPD-KCPENRTCINNQ----CVCPPRRTGPDCQ---EEIC--PNECHEF 339
EG +C +C TCI+ C+C TGP+CQ C N C+
Sbjct: 1341 EGATCENDARTCGSLRCLNGGTCISGPRSPTCLCLGSFTGPECQFPASSPCVGSNPCY-- 1398
Query: 340 LNHGTCD 346
N GTC+
Sbjct: 1399 -NQGTCE 1404
Score = 58 (25.5 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
+C C P +G +C +I NEC +N GTC + +G
Sbjct: 738 KCDCAPGWSGTNC--DINNNECESNPCVNGGTCKDMTSG 774
Score = 53 (23.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 15/46 (32%), Positives = 18/46 (39%)
Query: 305 CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEF-LNHGTC 345
C TC + C CP P C E+ NEC+ HG C
Sbjct: 687 CHNGGTCEDGIAGFTCRCPEGYHDPTCLSEV--NECNSNPCIHGAC 730
Score = 51 (23.0 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C CP R G C+ + LN GTC
Sbjct: 1334 CRCPARFEGATCENDARTCGSLRCLNGGTC 1363
Score = 39 (18.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 325 PDCQEEICPNECHEFLNHGTC 345
P+CQE+ C+ N+ C
Sbjct: 1452 PECQEDAGNKVCNLQCNNHAC 1472
>UNIPROTKB|P11047 [details] [associations]
symbol:LAMC1 "Laminin subunit gamma-1" species:9606 "Homo
sapiens" [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=NAS;TAS] [GO:0005615
"extracellular space" evidence=NAS] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0007492 "endoderm development" evidence=TAS]
[GO:0016477 "cell migration" evidence=IMP] [GO:0022617
"extracellular matrix disassembly" evidence=IMP] [GO:0006461
"protein complex assembly" evidence=IDA] [GO:0031581 "hemidesmosome
assembly" evidence=IMP] [GO:0005201 "extracellular matrix
structural constituent" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IDA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11
complex" evidence=TAS] [GO:0043259 "laminin-10 complex"
evidence=TAS] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0005615 GO:GO:0016477
GO:GO:0006461 GO:GO:0070062 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0007492
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0050679
GO:GO:0031581 DrugBank:DB00015 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0005606 GO:GO:0043259 GO:GO:0043260
CleanEx:HS_LAMB2 CTD:3915 HOVERGEN:HBG100808 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS EMBL:J03202 EMBL:M55210 EMBL:M55217 EMBL:M55201
EMBL:M55211 EMBL:M55212 EMBL:M55213 EMBL:M55214 EMBL:M55215
EMBL:M55216 EMBL:M55192 EMBL:M55193 EMBL:M55194 EMBL:M55195
EMBL:M55196 EMBL:M55197 EMBL:M55198 EMBL:M55199 EMBL:M55200
EMBL:M55202 EMBL:M55203 EMBL:M55204 EMBL:M55205 EMBL:M55206
EMBL:M55207 EMBL:M55208 EMBL:M55209 EMBL:AL354953 EMBL:AL450304
EMBL:X13939 EMBL:M27654 IPI:IPI00298281 PIR:S13548
RefSeq:NP_002284.3 UniGene:Hs.609663 ProteinModelPortal:P11047
SMR:P11047 IntAct:P11047 MINT:MINT-1184520 STRING:P11047
PhosphoSite:P11047 DMDM:224471885 PaxDb:P11047 PRIDE:P11047
Ensembl:ENST00000258341 GeneID:3915 KEGG:hsa:3915 UCSC:uc001gpy.4
GeneCards:GC01P182992 H-InvDB:HIX0001405 HGNC:HGNC:6492
HPA:CAB004486 HPA:HPA001908 HPA:HPA001909 MIM:150290
neXtProt:NX_P11047 PharmGKB:PA30280 InParanoid:P11047
PhylomeDB:P11047 ChiTaRS:LAMC1 GenomeRNAi:3915 NextBio:15381
Bgee:P11047 CleanEx:HS_LAMC1 Genevestigator:P11047
GermOnline:ENSG00000135862 Uniprot:P11047
Length = 1609
Score = 192 (72.6 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 49/131 (37%), Positives = 62/131 (47%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDW 87
+ C C+ GY + P+ LG C V C CN HS TC G+C+ C D
Sbjct: 696 YGGQFC-EMCLSGYRRETPN------LGPYS-PC-VLCACNGHSETCDPETGVCN-CRDN 745
Query: 88 TTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNC 144
T G HC+ C G YG++T T C+ C C G+S V + C C T GK C
Sbjct: 746 TAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPG-GSSCAVVPKTKEVVCTNCPTGTTGKRC 804
Query: 145 ERCLPGYYGDP 155
E C GY+GDP
Sbjct: 805 ELCDDGYFGDP 815
Score = 189 (71.6 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 52/165 (31%), Positives = 79/165 (47%)
Query: 16 DALSRCTVL----LLYIFNASLCY-NKCIYGYCKGP--PDYSCQCELGWTGVDCSVNCLC 68
+A+ C L L I+N + Y ++C G+ P P+ + +C+ +C++
Sbjct: 837 NAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCK----ACNCNLYGTM 892
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
S+C G C EC TG C C G Y N + +GC +CDC++ G S G CD
Sbjct: 893 KQQSSCNPVTGQC-ECLPHVTGQDCGACDPGFY-NLQSGQGCERCDCHALG-STNGQCDI 949
Query: 129 ITGECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCMARGMLT 172
TG+C CQ G++CERC ++G +G C C G L+
Sbjct: 950 RTGQCECQPGITGQHCERCEVNHFGFGPEGCKPC--DCHPEGSLS 992
Score = 181 (68.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 36/94 (38%), Positives = 52/94 (55%)
Query: 62 CSVNCLCN---NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
CS +C C+ + ST G C C GD C C+ G + + T+ GCR C C+
Sbjct: 395 CS-SCHCSPVGSLSTQCDSYGRCS-CKPGVMGDKCDRCQPGFH--SLTEAGCRPCSCDPS 450
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
G+ + C+ TG C+C+DN +G NCERC PG++
Sbjct: 451 GS--IDECNIETGRCVCKDNVEGFNCERCKPGFF 482
Score = 170 (64.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 37/108 (34%), Positives = 55/108 (50%)
Query: 58 TGVDCSVNCLCNNHSTCV----HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG---- 109
T DC C C S+C +C C TTG C+ C G +G+ + G
Sbjct: 766 TSSDCQP-CPCPGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRL 824
Query: 110 CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
CR C C+ + + + +G C+ +TGEC+ C NT G C+RC G++G+P
Sbjct: 825 CRLCQCSDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNP 872
Score = 161 (61.7 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 36/116 (31%), Positives = 52/116 (44%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNSH 118
CS N N C G C +C T G +C C+ G +GN + C+ C+CN +
Sbjct: 830 CSDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLY 889
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
G C+ +TG+C C + G++C C PG+Y + G C A G G
Sbjct: 890 GTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNG 945
Score = 156 (60.0 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 32/73 (43%), Positives = 38/73 (52%)
Query: 90 GDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C+ C +G Y T G C C CN H + CD TG C C+DNT G +CE
Sbjct: 698 GQFCEMCLSG-YRRETPNLGPYSPCVLCACNGHSET----CDPETGVCNCRDNTAGPHCE 752
Query: 146 RCLPGYYGDPTDG 158
+C GYYGD T G
Sbjct: 753 KCSDGYYGDSTAG 765
Score = 156 (60.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 36/112 (32%), Positives = 50/112 (44%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
G C P Y+ Q G DC + L + + C G C EC TG HC+ C
Sbjct: 917 GACD-PGFYNLQSGQGCERCDC--HALGSTNGQCDIRTGQC-ECQPGITGQHCERCEVNH 972
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G EGC+ CDC+ G+ L D G C C++ G C++C Y+
Sbjct: 973 FGFGP--EGCKPCDCHPEGSLSLQCKDD--GRCECREGFVGNRCDQCEENYF 1020
Score = 50 (22.7 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 312 INNQCVCPPRRTGPDC 327
+ QC C P TG DC
Sbjct: 901 VTGQCECLPHVTGQDC 916
Score = 45 (20.9 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 19/64 (29%), Positives = 25/64 (39%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTGVHITHGRTLHYQVDLIRCTCR 372
QC C P TG C+ C F G CD H +L + D RC CR
Sbjct: 953 QCECQPGITGQHCER--CEVNHFGFGPEGCKPCDC-----HPEGSLSLQCKDDG-RCECR 1004
Query: 373 QVYL 376
+ ++
Sbjct: 1005 EGFV 1008
>ZFIN|ZDB-GENE-070112-1202 [details] [associations]
symbol:zgc:158328 "zgc:158328" species:7955 "Danio
rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-070112-1202 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS00010 Pfam:PF12661
HOGENOM:HOG000097840 HOVERGEN:HBG079790 EMBL:BC129204
IPI:IPI00829071 RefSeq:NP_001073658.1 UniGene:Dr.95104
ProteinModelPortal:A1L1T4 STRING:A1L1T4 GeneID:567225
KEGG:dre:567225 InParanoid:A1L1T4 NextBio:20888577 Uniprot:A1L1T4
Length = 1339
Score = 171 (65.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 48/145 (33%), Positives = 60/145 (41%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVHGI 78
S C C G P + +C+C LGWTG V+C C+C N+ TC
Sbjct: 1117 SFC--TCANGGVCDPVNGTCRCGLGWTGQHCEKVCVSGHYGVNCEQKCVCQNNGTCDRFT 1174
Query: 79 GICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C C G CQ+ C AG +G Q C C G+ CD +TG+C C
Sbjct: 1175 GCCS-CPSGYYGPACQHRCPAGFFGELCAQP----CVCKQ-GHQ----CDHVTGKCECPP 1224
Query: 138 NTQGKNCE-RCLPGYYGDPTDGGTC 161
G CE RC G +G G C
Sbjct: 1225 GYHGNQCEKRCESGRFGRDC-AGVC 1248
Score = 167 (63.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 45/132 (34%), Positives = 61/132 (46%)
Query: 41 GYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
G C P Y +CQ C G+ G C+ C+C C H G C EC G+ C+
Sbjct: 1175 GCCSCPSGYYGPACQHRCPAGFFGELCAQPCVCKQGHQCDHVTGKC-ECPPGYHGNQCEK 1233
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
C +G +G ++ CDC+ G S CD TG+C+C G+ CE+ C YYG
Sbjct: 1234 RCESGRFG----RDCAGVCDCD--GAS----CDPTTGQCLCPPGKTGERCEKVCDSRYYG 1283
Query: 154 DPTDGGTCYYQC 165
P C +QC
Sbjct: 1284 -PD----CSFQC 1290
Score = 165 (63.1 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 34/104 (32%), Positives = 52/104 (50%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGC 110
+C +G+ G DC+ C C N + C H G C W HC C AG++G +Q
Sbjct: 846 RCPVGFYGQDCAQMCQCRNEAQCHHITGACRCTPGWAP-PHCILACPAGTFGLNCSQS-- 902
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
CDC++ G+ CD ++G+C C G C++ C G++G
Sbjct: 903 --CDCHNGGS-----CDPVSGQCSCAPGWTGDRCQQTCASGWFG 939
Score = 165 (63.1 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 46/119 (38%), Positives = 57/119 (47%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYC 96
C GY GP + S C G G DC+ C C C G C+ C TTG C Q C
Sbjct: 1050 CQPGYF-GP-NCSISCPSGHYGRDCAQVCSCGEKGQCHPETGRCN-CAPGTTGLSCEQMC 1106
Query: 97 RAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
G YG Q CR C C ++G GVCD + G C C G++CE+ C+ G+YG
Sbjct: 1107 PRGRYG---VQ--CRSFCTC-ANG----GVCDPVNGTCRCGLGWTGQHCEKVCVSGHYG 1155
Score = 164 (62.8 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 45/132 (34%), Positives = 61/132 (46%)
Query: 30 NASLCYNKCIYGYCK-----GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N + C++ I G C+ PP C G G++CS +C C+N +C G C
Sbjct: 864 NEAQCHH--ITGACRCTPGWAPPHCILACPAGTFGLNCSQSCDCHNGGSCDPVSGQCSCA 921
Query: 85 HDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGK 142
WT GD CQ C +G +G Q KC C +GV CD +TG C C G
Sbjct: 922 PGWT-GDRCQQTCASGWFGKNCEQ----KCICP------VGVACDHVTGRCGCPAGYTGN 970
Query: 143 NCERCLP-GYYG 153
+CE+ P G +G
Sbjct: 971 SCEKMCPQGRFG 982
Score = 163 (62.4 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 46/141 (32%), Positives = 59/141 (41%)
Query: 34 CYNKCIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLC-NNHSTCVHGIGICDECHDWTTG 90
C C GY G CQ CE G+ G C+ C C +N +C G C C TG
Sbjct: 743 CQRMCPAGY-HGE---KCQMVCEAGFWGAGCANVCQCASNAVSCESSSGRC-VCESGYTG 797
Query: 91 DHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RC 147
HC + C G YG C++ C+C + CD ++G C C G +CE RC
Sbjct: 798 QHCDKKCSEGLYG-----ADCKQVCECENGAE-----CDHVSGACTCAAGWVGSHCEKRC 847
Query: 148 LPGYYGDPTDGGTCYYQCMAR 168
G+YG C C R
Sbjct: 848 PVGFYGQD-----CAQMCQCR 863
Score = 158 (60.7 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 41/122 (33%), Positives = 57/122 (46%)
Query: 41 GYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDE-CHDWTTGDHCQ 94
G C P Y CQ C+ G+ GV C C C++ +C G C C G+ CQ
Sbjct: 698 GTCLCKPGYHGDRCQTDCDDGYFGVGCHGLCNCSDGKSCDPKTGECQRMCPAGYHGEKCQ 757
Query: 95 Y-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGY 151
C AG +G GC C C S+ S C+S +G C+C+ G++C++ C G
Sbjct: 758 MVCEAGFWG-----AGCANVCQCASNAVS----CESSSGRCVCESGYTGQHCDKKCSEGL 808
Query: 152 YG 153
YG
Sbjct: 809 YG 810
Score = 157 (60.3 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 45/124 (36%), Positives = 56/124 (45%)
Query: 39 IYGYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDWTTGDH 92
+ G C P Y SC+ C G G++CS C C+ C H G C C G+
Sbjct: 957 VTGRCGCPAGYTGNSCEKMCPQGRFGLNCSRVCSCSGDQYRCHHITGRCS-CQPGYNGNR 1015
Query: 93 CQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLP 149
C CR G+YG C+K C C ++G G CD G CICQ G NC C
Sbjct: 1016 CLLRCREGTYGPY-----CKKRCSC-ANG----GRCDFRNGSCICQPGYFGPNCSISCPS 1065
Query: 150 GYYG 153
G+YG
Sbjct: 1066 GHYG 1069
Score = 142 (55.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 41/108 (37%), Positives = 50/108 (46%)
Query: 53 CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG---NATTQEG 109
CE G G DCSV+C CV+G G+C D C C G G N T EG
Sbjct: 540 CETGVFGDDCSVSC-----EDCVNG-GVCA-----AEKDRC-VCPPGWTGLICNDTCPEG 587
Query: 110 CRKCDCNSH---GNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+CNS N G CD +TG+C+C G +CE C G+YG
Sbjct: 588 TYGAECNSLCVCKNG--GRCDPVTGKCLCPPGVHGLHCENGCPQGFYG 633
Score = 138 (53.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 43/151 (28%), Positives = 61/151 (40%)
Query: 30 NASLCYNKCIYG-YCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGIC 81
+ S+ C+ G C D C C GWTG+ C+ C CN+ C +G G C
Sbjct: 548 DCSVSCEDCVNGGVCAAEKD-RCVCPPGWTGLICNDTCPEGTYGAECNSLCVCKNG-GRC 605
Query: 82 DE------CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
D C G HC+ C G YG R+C+C ++G+ C + G C+
Sbjct: 606 DPVTGKCLCPPGVHGLHCENGCPQGFYGRLCR----RRCNCPNNGH-----CHRLYGGCL 656
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
C GK C P + + G C +C
Sbjct: 657 CTPGLYGKFCHLPCPKW----SHGAGCSEEC 683
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 40/114 (35%), Positives = 50/114 (43%)
Query: 39 IYGYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C+ PP Y C+ CE G G DC+ C C+ S C G C C TG+ C
Sbjct: 1216 VTGKCECPPGYHGNQCEKRCESGRFGRDCAGVCDCDGAS-CDPTTGQC-LCPPGKTGERC 1273
Query: 94 Q-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ C + YG C +C+C HG G CD TG C C G CE
Sbjct: 1274 EKVCDSRYYG-----PDCSFQCEC-VHG----GQCDPQTGHCSCPQTWLGPTCE 1317
Score = 124 (48.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 40/132 (30%), Positives = 55/132 (41%)
Query: 33 LCYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDE 83
+C N +C + G C PP C+ C G+ G C C C N+ C G C
Sbjct: 598 VCKNGGRCDPVTGKCLCPPGVHGLHCENGCPQGFYGRLCRRRCNCPNNGHCHRLYGGC-L 656
Query: 84 CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
C G C C S+G ++E C+C NS+ CD G C+C+ G
Sbjct: 657 CTPGLYGKFCHLPCPKWSHGAGCSEE----CECVQE-NSLS--CDPQMGTCLCKPGYHGD 709
Query: 143 NCER-CLPGYYG 153
C+ C GY+G
Sbjct: 710 RCQTDCDDGYFG 721
Score = 70 (29.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 301 CPDKCP-ENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECH---EFLNHGTCD 346
C C + +C QC+CPP +TG C E++C + +C E ++ G CD
Sbjct: 1244 CAGVCDCDGASCDPTTGQCLCPPGKTGERC-EKVCDSRYYGPDCSFQCECVHGGQCD 1299
Score = 70 (29.7 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 22/61 (36%), Positives = 28/61 (45%)
Query: 297 QIFSCPDK--C-PENRTCINNQCVCPPRRTGPDCQEEICPN-----ECHEFL---NHGTC 345
Q+ SC +K C PE +C C P TG C E++CP +C F N G C
Sbjct: 1074 QVCSCGEKGQCHPET-----GRCNCAPGTTGLSC-EQMCPRGRYGVQCRSFCTCANGGVC 1127
Query: 346 D 346
D
Sbjct: 1128 D 1128
Score = 65 (27.9 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 300 SCPDKC--PENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C KC P C + +C CP TG C E++CP
Sbjct: 941 NCEQKCICPVGVACDHVTGRCGCPAGYTGNSC-EKMCP 977
Score = 63 (27.2 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 15/38 (39%), Positives = 16/38 (42%)
Query: 300 SCPDKC--PENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C KC N TC C CP GP CQ CP
Sbjct: 1157 NCEQKCVCQNNGTCDRFTGCCSCPSGYYGPACQHR-CP 1193
Score = 56 (24.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 15/47 (31%), Positives = 18/47 (38%)
Query: 290 EGFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPN 334
EG Y C C C N C+C P GP+C CP+
Sbjct: 1022 EGTYGPYCKKRC--SCANGGRCDFRNGSCICQPGYFGPNCSIS-CPS 1065
Score = 55 (24.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 15/49 (30%), Positives = 20/49 (40%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNH--GTCD 346
P C + C + +C CPP G C++ C E F G CD
Sbjct: 1204 PCVCKQGHQCDHVTGKCECPPGYHGNQCEKR-C--ESGRFGRDCAGVCD 1249
Score = 55 (24.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 300 SCPDKCPENRTC--INNQCVCPPRRTGPDCQE 329
SC C +C ++ QC C P TG CQ+
Sbjct: 902 SCD--CHNGGSCDPVSGQCSCAPGWTGDRCQQ 931
Score = 53 (23.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPN-----ECHEFL---NHGTCD 346
C C +N C C TG C E++C + C + N+GTCD
Sbjct: 1121 CANGGVCDPVNGTCRCGLGWTGQHC-EKVCVSGHYGVNCEQKCVCQNNGTCD 1171
Score = 49 (22.3 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 305 CPENRTCINNQC--VCPPRRTGPDCQEEI-CPNE---CHEFLNHGTC 345
CP T N C +CP R G +C C + CH +C
Sbjct: 963 CPAGYT--GNSCEKMCPQGRFGLNCSRVCSCSGDQYRCHHITGRCSC 1007
Score = 49 (22.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 301 CPDKCP---ENRTCINNQ---CVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
C ++C EN + Q C+C P G CQ + C + HG C+
Sbjct: 679 CSEECECVQENSLSCDPQMGTCLCKPGYHGDRCQTD-CDDGYFGVGCHGLCN 729
Score = 46 (21.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQCVC 318
G A Y SC CP+ R +N VC
Sbjct: 962 GCPAGYTGNSCEKMCPQGRFGLNCSRVC 989
Score = 44 (20.5 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 299 FSCPDKCPENRTCI--NNQCVCPPRRTGPDCQ 328
F C +C C C CP GP C+
Sbjct: 1288 FQC--ECVHGGQCDPQTGHCSCPQTWLGPTCE 1317
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 304 KCPENR-TCINN--QCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+C N +C ++ +CVC TG C ++ C E L C
Sbjct: 774 QCASNAVSCESSSGRCVCESGYTGQHCDKK-----CSEGLYGADC 813
Score = 38 (18.4 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 18/66 (27%), Positives = 24/66 (36%)
Query: 291 GFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDC----QE----EICPNECHEFL 340
G N + ++ SC + C I +C C P G C +E C C
Sbjct: 982 GLNCS-RVCSCSG---DQYRCHHITGRCSCQPGYNGNRCLLRCREGTYGPYCKKRC-SCA 1036
Query: 341 NHGTCD 346
N G CD
Sbjct: 1037 NGGRCD 1042
>UNIPROTKB|F1RHK7 [details] [associations]
symbol:PEAR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043654 "recognition of apoptotic cell" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 CTD:375033 OMA:PPGTWGF
EMBL:CU151867 RefSeq:XP_001929552.1 UniGene:Ssc.28869
Ensembl:ENSSSCT00000007080 GeneID:100156908 KEGG:ssc:100156908
Uniprot:F1RHK7
Length = 1038
Score = 161 (61.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 46/145 (31%), Positives = 62/145 (42%)
Query: 46 PPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICD------ECHDWTTGDH 92
P C C GW G+ C+ +C C H C+HG G+C C TG H
Sbjct: 375 PMSGECSCLPGWAGLHCNESCPQDTHGPGCQEHCLCLHG-GVCQPDSGLCRCAPGYTGPH 433
Query: 93 C-QYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLP 149
C C SYG N ++ +C C N++ C + G CIC++ Q NC C P
Sbjct: 434 CASLCPPDSYGVNCSS-----RCSCE---NAI--ACSPVDGACICKEGWQRGNCSIPCPP 483
Query: 150 GYYGDPTDGGTCYYQCMARGMLTGP 174
G +G + +C QC A G P
Sbjct: 484 GTWGFNCNA-SC--QC-AHGAACSP 504
Score = 157 (60.3 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 57/174 (32%), Positives = 70/174 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICD 82
NAS C +C +G P +C C GW G C + C C +H C H G CD
Sbjct: 491 NAS-C--QCAHGAACSPQTGACTCTPGWHGAHCQLPCPKGQFGEGCASHCDCDHSDG-CD 546
Query: 83 ----ECH---DWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
CH WT G C C G +G + C C + G G C G C+
Sbjct: 547 PVHGRCHCQAGWT-GTRCHLPCPEGFWGTNCSNT----CTCKN-G----GTCIPENGNCV 596
Query: 135 CQDNTQGKNCER-CLPGYYGD---PT----------DGGTCYYQCMARGMLTGP 174
C +G +C+R C PG YG P GTCY C+A G TGP
Sbjct: 597 CAPGFRGPSCQRPCQPGRYGKRCVPCKCANHSSCHPSNGTCY--CLA-GW-TGP 646
Score = 152 (58.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 44/137 (32%), Positives = 53/137 (38%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------------CNNHSTCVHGIG 79
LC +C++G C P CQC W G DCS C C N S+C G
Sbjct: 104 LCSQECVHGRCVAPNQ--CQCVQDWRGDDCSSACAPGVWGPQCDKPCNCGNSSSCDPKSG 161
Query: 80 ICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQD 137
C C HC Q C G YG A C+ C C+ CD TG C+C
Sbjct: 162 ACS-CPPGLQPPHCLQPCSPGRYGPA-----CQYSCQCHR------APCDPQTGACLCPP 209
Query: 138 NTQGKNCER-CLPGYYG 153
G +CE C +G
Sbjct: 210 ERTGPSCEESCSLSTFG 226
Score = 149 (57.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 42/132 (31%), Positives = 54/132 (40%)
Query: 34 CYNKCIY----GYCKGPPDY-----SCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
C+N ++ G C PP + S C G+ G +CS C C+N C G C C
Sbjct: 235 CHNGGVFQASQGSCSCPPGWMGTICSLPCPEGFHGPNCSQECRCHNGGLCDRFTGQC-RC 293
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TGD C + C G +G Q+ CDC C G C+C+ G
Sbjct: 294 APGYTGDRCREECPVGYFG----QDCAEMCDCAPGAR-----CFPANGACLCEHGFTGDR 344
Query: 144 C-ERCLP-GYYG 153
C ER P G YG
Sbjct: 345 CAERLCPDGLYG 356
Score = 149 (57.5 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 48/134 (35%), Positives = 53/134 (39%)
Query: 30 NASLCYN--KCI--YGYCKGPPDY---SCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGI 80
N C N CI G C P + SCQ C+ G G C V C C NHS+C G
Sbjct: 578 NTCTCKNGGTCIPENGNCVCAPGFRGPSCQRPCQPGRYGKRC-VPCKCANHSSCHPSNGT 636
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C WT D Q C G +G Q C C HG G C G C C
Sbjct: 637 CYCLAGWTGPDCSQPCPLGHWGANCAQ----LCQCR-HG----GTCHPQDGSCFCPPGWI 687
Query: 141 GKNC-ERCLPGYYG 153
G C E C PG +G
Sbjct: 688 GHLCLEGCPPGMFG 701
Score = 145 (56.1 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 45/144 (31%), Positives = 58/144 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N LC G C+ P Y+ C +C +G+ G DC+ C C + C G C C
Sbjct: 280 NGGLCDR--FTGQCRCAPGYTGDRCREECPVGYFGQDCAEMCDCAPGARCFPANGAC-LC 336
Query: 85 HDWTTGDHC--QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
TGD C + C G YG + Q C CD H S C ++GEC C G
Sbjct: 337 EHGFTGDRCAERLCPDGLYG-LSCQVPCT-CD-PEHSFS----CHPMSGECSCLPGWAGL 389
Query: 143 NCERCLPGYYGDPTDGGTCYYQCM 166
+C P T G C C+
Sbjct: 390 HCNESCP----QDTHGPGCQEHCL 409
Score = 142 (55.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 45/155 (29%), Positives = 58/155 (37%)
Query: 34 CYNKCIYGYCKG--PPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVHGI 78
C + C + G P C C+ GWTG +CS C C N TC+
Sbjct: 533 CASHCDCDHSDGCDPVHGRCHCQAGWTGTRCHLPCPEGFWGTNCSNTCTCKNGGTCIPEN 592
Query: 79 GICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C C G CQ C+ G YG C C C +H + C G C C
Sbjct: 593 GNC-VCAPGFRGPSCQRPCQPGRYGKR-----CVPCKCANHSS-----CHPSNGTCYCLA 641
Query: 138 NTQGKNCERCLP-GYYG-------DPTDGGTCYYQ 164
G +C + P G++G GGTC+ Q
Sbjct: 642 GWTGPDCSQPCPLGHWGANCAQLCQCRHGGTCHPQ 676
Score = 132 (51.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 42/129 (32%), Positives = 54/129 (41%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC--VHGIGICDECHDW 87
++ LC +C GY GP S C GV+CS C C N C V G IC E W
Sbjct: 419 DSGLC--RCAPGYT-GPHCASL-CPPDSYGVNCSSRCSCENAIACSPVDGACICKE--GW 472
Query: 88 TTGDHCQYCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
G+ C G++G C C C +HG C TG C C G +C+
Sbjct: 473 QRGNCSIPCPPGTWGF-----NCNASCQC-AHG----AACSPQTGACTCTPGWHGAHCQL 522
Query: 147 -CLPGYYGD 154
C G +G+
Sbjct: 523 PCPKGQFGE 531
Score = 125 (49.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 45/136 (33%), Positives = 59/136 (43%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC--QYCRAGSYGNATTQEG 109
+C +G+ G DC+ C C + C G C C TGD C + C G YG + Q
Sbjct: 305 ECPVGYFGQDCAEMCDCAPGARCFPANGAC-LCEHGFTGDRCAERLCPDGLYG-LSCQVP 362
Query: 110 CRKCDC-NSHG-NSVLGVCDSITG----EC--ICQDNTQGKNCER---CLPGYYGDPTDG 158
C CD +S + + G C + G C C +T G C+ CL G P D
Sbjct: 363 CT-CDPEHSFSCHPMSGECSCLPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVCQP-DS 420
Query: 159 GTCYYQCMARGMLTGP 174
G C +C A G TGP
Sbjct: 421 GLC--RC-APGY-TGP 432
Score = 78 (32.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 23/64 (35%), Positives = 26/64 (40%)
Query: 290 EGFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPNE----CH--EFLN 341
EGF T +C C TCI N CVC P GP CQ P C + N
Sbjct: 569 EGFWGTNCSNTCT--CKNGGTCIPENGNCVCAPGFRGPSCQRPCQPGRYGKRCVPCKCAN 626
Query: 342 HGTC 345
H +C
Sbjct: 627 HSSC 630
Score = 69 (29.3 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 23/66 (34%), Positives = 26/66 (39%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNH--GTCDLLLTGVHITHG 357
P KC + +C N C C TGPDC + CP L H C L HG
Sbjct: 621 PCKCANHSSCHPSNGTCYCLAGWTGPDCSQP-CP------LGHWGANCAQLC---QCRHG 670
Query: 358 RTLHYQ 363
T H Q
Sbjct: 671 GTCHPQ 676
Score = 66 (28.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 17/46 (36%), Positives = 20/46 (43%)
Query: 290 EGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
EGF+ C +C C QC C P TG C+EE CP
Sbjct: 265 EGFHGPNCSQEC--RCHNGGLCDRFTGQCRCAPGYTGDRCREE-CP 307
Score = 59 (25.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 305 CPENRTCI--NNQCVCPPRRTGPDCQEEICPN 334
C C N C+C TG C E +CP+
Sbjct: 321 CAPGARCFPANGACLCEHGFTGDRCAERLCPD 352
Score = 58 (25.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 300 SC--PDKC-PENR-TC--INNQCVCPPRRTGPDCQEEICPNECH 337
SC P C PE+ +C ++ +C C P G C E CP + H
Sbjct: 358 SCQVPCTCDPEHSFSCHPMSGECSCLPGWAGLHCNES-CPQDTH 400
Score = 56 (24.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 285 QGKPSEGFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQ 328
+G P F A S P +C C CVCPP +G C+
Sbjct: 693 EGCPPGMFGANC---SQPCQCGSGERCHPETGACVCPPGHSGAPCR 735
Score = 55 (24.4 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 26/85 (30%), Positives = 29/85 (34%)
Query: 291 GFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPN-ECHE-FLNHGTCD 346
GFN SC +C C C C P G CQ CP + E +H CD
Sbjct: 487 GFNCNA---SC--QCAHGAACSPQTGACTCTPGWHGAHCQLP-CPKGQFGEGCASHCDCD 540
Query: 347 LLLTGVHITHGRTLHYQVDLIRCTC 371
G HGR H Q C
Sbjct: 541 HS-DGCDPVHGRC-HCQAGWTGTRC 563
Score = 55 (24.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP GP+C +E C CH N G CD
Sbjct: 263 CPEGFHGPNCSQE-C--RCH---NGGLCD 285
Score = 52 (23.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 316 CVCPPRRTGPDCQEEICPNECH 337
C C P TGP C +CP + +
Sbjct: 423 CRCAPGYTGPHCAS-LCPPDSY 443
Score = 49 (22.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 304 KCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
+C TC + C CPP G C E CP
Sbjct: 666 QCRHGGTCHPQDGSCFCPPGWIGHLCLEG-CP 696
Score = 49 (22.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 299 FSCPDKCPENRTCI----NNQCVCPPRRTGPDCQEEICPNECH 337
FSCP P + + C CPP G C CP H
Sbjct: 227 FSCPSIPPCHNGGVFQASQGSCSCPPGWMGTICSLP-CPEGFH 268
Score = 43 (20.2 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 305 CPENRTCINNQCV--CPPRRTGPDCQEEI-CPN--ECHEFLNHGTC 345
CP I + C+ CPP G +C + C + CH G C
Sbjct: 682 CPPG--WIGHLCLEGCPPGMFGANCSQPCQCGSGERCHP--ETGAC 723
Score = 43 (20.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 318 CPPRRTGPDCQEE-IC 332
CP GP CQE +C
Sbjct: 395 CPQDTHGPGCQEHCLC 410
>UNIPROTKB|F1MSM3 [details] [associations]
symbol:NOTCH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000974 "negative regulation of pro-B cell
differentiation" evidence=IEA] [GO:2000811 "negative regulation of
anoikis" evidence=IEA] [GO:2000737 "negative regulation of stem
cell differentiation" evidence=IEA] [GO:1901201 "regulation of
extracellular matrix assembly" evidence=IEA] [GO:0097150 "neuronal
stem cell maintenance" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0072602 "interleukin-4 secretion" evidence=IEA]
[GO:0072144 "glomerular mesangial cell development" evidence=IEA]
[GO:0072044 "collecting duct development" evidence=IEA] [GO:0072017
"distal tubule development" evidence=IEA] [GO:0071372 "cellular
response to follicle-stimulating hormone stimulus" evidence=IEA]
[GO:0070986 "left/right axis specification" evidence=IEA]
[GO:0061419 "positive regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IEA]
[GO:0060982 "coronary artery morphogenesis" evidence=IEA]
[GO:0060979 "vasculogenesis involved in coronary vascular
morphogenesis" evidence=IEA] [GO:0060956 "endocardial cell
differentiation" evidence=IEA] [GO:0060948 "cardiac vascular smooth
muscle cell development" evidence=IEA] [GO:0060843 "venous
endothelial cell differentiation" evidence=IEA] [GO:0060842
"arterial endothelial cell differentiation" evidence=IEA]
[GO:0060768 "regulation of epithelial cell proliferation involved
in prostate gland development" evidence=IEA] [GO:0060740 "prostate
gland epithelium morphogenesis" evidence=IEA] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IEA]
[GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IEA] [GO:0060045 "positive regulation of cardiac muscle
cell proliferation" evidence=IEA] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048715
"negative regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0046427
"positive regulation of JAK-STAT cascade" evidence=IEA] [GO:0045955
"negative regulation of calcium ion-dependent exocytosis"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=IEA] [GO:0045618 "positive
regulation of keratinocyte differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0042640 "anagen" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0032495
"response to muramyl dipeptide" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0031069 "hair follicle
morphogenesis" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0030513 "positive regulation of BMP
signaling pathway" evidence=IEA] [GO:0030335 "positive regulation
of cell migration" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0030279 "negative regulation of ossification"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0014807 "regulation
of somitogenesis" evidence=IEA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=IEA] [GO:0010812 "negative
regulation of cell-substrate adhesion" evidence=IEA] [GO:0010718
"positive regulation of epithelial to mesenchymal transition"
evidence=IEA] [GO:0010001 "glial cell differentiation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0009912
"auditory receptor cell fate commitment" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007440 "foregut
morphogenesis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007386 "compartment pattern specification"
evidence=IEA] [GO:0007221 "positive regulation of transcription of
Notch receptor target" evidence=IEA] [GO:0006959 "humoral immune
response" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004857 "enzyme inhibitor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003344 "pericardium morphogenesis"
evidence=IEA] [GO:0003273 "cell migration involved in endocardial
cushion formation" evidence=IEA] [GO:0003270 "Notch signaling
pathway involved in regulation of secondary heart field cardioblast
proliferation" evidence=IEA] [GO:0003256 "regulation of
transcription from RNA polymerase II promoter involved in
myocardial precursor cell differentiation" evidence=IEA]
[GO:0003241 "growth involved in heart morphogenesis" evidence=IEA]
[GO:0003222 "ventricular trabecula myocardium morphogenesis"
evidence=IEA] [GO:0003219 "cardiac right ventricle formation"
evidence=IEA] [GO:0003214 "cardiac left ventricle morphogenesis"
evidence=IEA] [GO:0003213 "cardiac right atrium morphogenesis"
evidence=IEA] [GO:0003198 "epithelial to mesenchymal transition
involved in endocardial cushion formation" evidence=IEA]
[GO:0003192 "mitral valve formation" evidence=IEA] [GO:0003184
"pulmonary valve morphogenesis" evidence=IEA] [GO:0003181
"atrioventricular valve morphogenesis" evidence=IEA] [GO:0003180
"aortic valve morphogenesis" evidence=IEA] [GO:0003169 "coronary
vein morphogenesis" evidence=IEA] [GO:0003162 "atrioventricular
node development" evidence=IEA] [GO:0003160 "endocardium
morphogenesis" evidence=IEA] [GO:0002437 "inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0002193 "MAML1-RBP-Jkappa-
ICN1 complex" evidence=IEA] [GO:0002040 "sprouting angiogenesis"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0001889
"liver development" evidence=IEA] [GO:0001708 "cell fate
specification" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IEA] [GO:0001047
"core promoter binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005634 GO:GO:0008284 GO:GO:0004857 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0000122 GO:GO:0072144 GO:GO:0030513
GO:GO:0010718 PROSITE:PS01186 GO:GO:0001047 GO:GO:0046427
PROSITE:PS00010 GO:GO:0003160 GO:GO:0010812 GO:GO:0072044
GO:GO:0072017 GO:GO:0045668 GO:GO:2000811 GO:GO:0010832
GO:GO:0048711 GO:GO:0045662 GO:GO:0048715 GO:GO:0030514
GO:GO:0032495 Pfam:PF12661 GeneTree:ENSGT00700000104305
GO:GO:0097150 GO:GO:0003180 GO:GO:0060253 SUPFAM:SSF90193
GO:GO:2000974 GO:GO:2000737 GO:GO:0061419 GO:GO:0002193
InterPro:IPR024600 Pfam:PF11936 OMA:HGGYNCV EMBL:DAAA02032322
EMBL:DAAA02032323 EMBL:DAAA02032324 EMBL:DAAA02032325
IPI:IPI00703165 Ensembl:ENSBTAT00000017746 Uniprot:F1MSM3
Length = 2534
Score = 174 (66.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 87/320 (27%), Positives = 121/320 (37%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC 93
N C G C D Y C CE G+TG C++N C + S C +G G C+ D G C
Sbjct: 649 NPCDSGTCLDKIDGYECACEPGYTGSMCNINIDECAD-SPCHNG-GTCE---DGINGFTC 703
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGY 151
+ C G Y + T +C N + G C DS+ G +C C G NC+
Sbjct: 704 R-CPEG-YHDPTCLSEVNECSSNP---CIHGACRDSLNGYKCDCDPGWSGANCDVNNDEC 758
Query: 152 YGDPT-DGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQ 205
+P +GGTC Y C R +GP Q + A N + T +
Sbjct: 759 ESNPCINGGTCKDMTSGYVCACREGFSGPNCQTNINECAS-NPCLNQGTCIDDVAGYKCN 817
Query: 206 SLDSNSTAPADIILLRLQPDINVPC-NENAVYIYDGLPDFVTSVGGTHQSTTLGVF---C 261
L + A +++L P PC N + F + Q T + C
Sbjct: 818 CLLPYTGATCEVVLAPCAPG---PCRNGGECRESEDYESFSCACPAGWQGQTCEIDINEC 874
Query: 262 TEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSC-PDKCPENRTC---INNQ-C 316
+ R + +G H + G G N I C P+ C +C IN C
Sbjct: 875 VKSPCRAGASCQNTNGSYRCHCQAGYT--GRNCETDIDDCRPNPCHNGGSCTDGINTAFC 932
Query: 317 VCPPRRTGPDCQEEICPNEC 336
C P G C+E+I NEC
Sbjct: 933 DCLPGFQGAFCEEDI--NEC 950
Score = 135 (52.6 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 78/317 (24%), Positives = 115/317 (36%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+ C+C G TG+ C +N C ++ C G CD + G C +G G A +Q+
Sbjct: 358 FYCECPHGRTGLLCHLNDACISNP-CNEGSN-CDT--NPVNGKAICTCPSGYTGPACSQD 413
Query: 109 GCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQC 165
+C ++ G C + G EC C G CE + +P TC Q
Sbjct: 414 -VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQI 472
Query: 166 MARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE---CLWIIGQSLDSNSTA-PADIILLR 221
+ PG +GL E N E +P + CL I + + T +
Sbjct: 473 GEFQCICMPGYEGLH---CEVNTDECASSPCLQNGRCLDKINEFVCECPTGFTGHLCQYD 529
Query: 222 LQPDINVPCNENAVYIYDGLPDFVTSV---G--GTHQSTTLGVFCTEDMHRGYEVLEAKS 276
+ + PC +N DG P+ T V G G H + + H G K
Sbjct: 530 VDECASTPC-KNGAKCLDG-PNTYTCVCTEGYTGPHCEVDIDECDPDPCHYG----SCKD 583
Query: 277 GVMTIHYKQGKPSEGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQ--- 328
GV T G + I C + C TC + C C TGP+C+
Sbjct: 584 GVATFTCLCQPGYTGHHCESNINECHSQPCRHGGTCQDRDNAYLCFCLKGTTGPNCEINL 643
Query: 329 EEICPNECHEFLNHGTC 345
++ N C + GTC
Sbjct: 644 DDCASNPC----DSGTC 656
Score = 134 (52.2 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 88/348 (25%), Positives = 123/348 (35%)
Query: 30 NASLCYNK-CIY-GYCKGP-PDYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGI 80
N C + C+ G C ++ C+C G+TG C + C C N + C+ G
Sbjct: 491 NTDECASSPCLQNGRCLDKINEFVCECPTGFTGHLCQYDVDECASTPCKNGAKCLDGPNT 550
Query: 81 --CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
C C + TG HC+ + C C+ +G+ GV T C+CQ
Sbjct: 551 YTC-VCTEGYTGPHCE----------VDIDECDPDPCH-YGSCKDGVA---TFTCLCQPG 595
Query: 139 TQGKNCERCLPGYYGDPT-DGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGK 192
G +CE + + P GGTC Y C TGP E N +
Sbjct: 596 YTGHHCESNINECHSQPCRHGGTCQDRDNAYLCFCLKGTTGPN--------CEINLDDCA 647
Query: 193 DTP--SRECL-WIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVG 249
P S CL I G + + + + PC+ N DG+ F
Sbjct: 648 SNPCDSGTCLDKIDGYECACEPGYTGSMCNINIDECADSPCH-NGGTCEDGINGFTCRCP 706
Query: 250 -GTHQSTTLGVF--CTEDMHRGYEVLEAKSGVMTIHYK-QGKPS-EGFNATYQIFSCPDK 304
G H T L C+ + ++ +G YK P G N C
Sbjct: 707 EGYHDPTCLSEVNECSSNPCIHGACRDSLNG-----YKCDCDPGWSGANCDVNNDECESN 761
Query: 305 -CPENRTCINNQ----CVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
C TC + C C +GP+CQ I NEC + LN GTC
Sbjct: 762 PCINGGTCKDMTSGYVCACREGFSGPNCQTNI--NECASNPCLNQGTC 807
Score = 121 (47.7 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 42/145 (28%), Positives = 57/145 (39%)
Query: 41 GYCKGPPDY---SCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
G C+ DY SC C GW G C ++ S C G C + T G + +C+
Sbjct: 843 GECRESEDYESFSCACPAGWQGQTCEIDINECVKSPCRAGAS----CQN-TNGSYRCHCQ 897
Query: 98 AGSYG-NATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
AG G N T + CR C++ G+ G+ T C C QG CE + P
Sbjct: 898 AGYTGRNCETDIDDCRPNPCHNGGSCTDGIN---TAFCDCLPGFQGAFCEEDINECASSP 954
Query: 156 TDGGTCYYQCMARGMLTGP-GPQGL 179
G C+ T P G G+
Sbjct: 955 CRNGANCTDCVDSYTCTCPTGFSGI 979
Score = 114 (45.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 40/141 (28%), Positives = 54/141 (38%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQ 107
Y+C C GWTG DCS N ++C G CHD +C+ C G G
Sbjct: 320 YNCVCVNGWTGEDCSENIDDCASASCFQGA----TCHDRVASFYCE-CPHGRTGLLCHLN 374
Query: 108 EGCRKCDCNSHGNSVLGVCDS--ITGE--CICQDNTQGKNC----ERCLPGYYGDPTD-G 158
+ C CN N CD+ + G+ C C G C + C G +P +
Sbjct: 375 DACISNPCNEGSN-----CDTNPVNGKAICTCPSGYTGPACSQDVDECSLG--ANPCEHA 427
Query: 159 GTCY-----YQCMARGMLTGP 174
G C ++C TGP
Sbjct: 428 GKCINTLGSFECQCLQGYTGP 448
Score = 107 (42.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 40/136 (29%), Positives = 55/136 (40%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGIC-DECHDWTTGDHCQYCRAGSYGNATTQ 107
Y+C C G++G+ C N S+C +G G C D + +T C C G G+ Q
Sbjct: 968 YTCTCPTGFSGIHCENNTPDCTESSCFNG-GTCVDGINSFT----C-LCPPGFTGSYC-Q 1020
Query: 108 EGCRKCDCNS--HGNSVLGVC-DSI-TGECICQDNTQGKNCERCLPGYYGDPT-DGGTCY 162
+CD HG G C DS T C C G NC+ + P + G C+
Sbjct: 1021 HDVNECDSRPCLHG----GTCHDSYGTYTCTCPQGYTGLNCQTLVRWCDSSPCKNDGRCW 1076
Query: 163 -----YQCMARGMLTG 173
Y+C TG
Sbjct: 1077 QTNALYRCECHSGWTG 1092
Score = 107 (42.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 39/129 (30%), Positives = 54/129 (41%)
Query: 36 NKCIYG-YC-KGPPDYSCQCELGWTGVDCSVN---C-----LCNNHSTC--VHGIGICDE 83
N C G C G Y+C+C WTG C+ + C C N TC HG C
Sbjct: 265 NSCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNTHGGYNCVC 324
Query: 84 CHDWTTGDHCQY----CRAGS-YGNATTQEGCRK--CDCNSHGNSVLGVCDSITGECICQ 136
+ WT G+ C C + S + AT + C+C HG + L +C + CI
Sbjct: 325 VNGWT-GEDCSENIDDCASASCFQGATCHDRVASFYCEC-PHGRTGL-LCH-LNDACISN 380
Query: 137 DNTQGKNCE 145
+G NC+
Sbjct: 381 PCNEGSNCD 389
Score = 97 (39.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 41/144 (28%), Positives = 55/144 (38%)
Query: 44 KGPPDYSCQCELGWTGVDCSVN----CLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAG 99
+G DY C C LG++G C CL S C++G G CD T ++ C G
Sbjct: 81 EGLVDYVCGCRLGFSGPLCLTPRDHACLA---SPCLNG-GTCDLL---TLTEYKCLCTPG 133
Query: 100 SYGNATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT-- 156
G Q + C C + G + I C C G C + + P
Sbjct: 134 WSGKTCQQADPCASNPCANGGQCLPFEASYI---CHCPPGFHGPTCRQDVNECSQSPGLC 190
Query: 157 -DGGTCY-----YQCMARGMLTGP 174
GGTC Y+C+ R TGP
Sbjct: 191 HHGGTCLNEVGSYRCVCRPTHTGP 214
Score = 90 (36.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 27/77 (35%), Positives = 32/77 (41%)
Query: 291 GFNATYQIFSCP-DKCPENRTCINN----QCVCPPRRTGPDCQEEI--C---PNECHEFL 340
G N I CP + C C++ C CPP TG C E++ C PN C
Sbjct: 252 GQNCEENIDDCPGNSCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQ--- 308
Query: 341 NHGTCDLLLTGVHITHG 357
N GTC H THG
Sbjct: 309 NGGTC-------HNTHG 318
Score = 84 (34.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 36/130 (27%), Positives = 50/130 (38%)
Query: 258 GVFCTEDMHRGYEVLEAKSGVMTIH----YKQGKPSEGFNATYQIFSCPD----KCPENR 309
G FC ED++ ++G Y P+ GF+ + + PD C
Sbjct: 940 GAFCEEDINECASS-PCRNGANCTDCVDSYTCTCPT-GFSGIHCENNTPDCTESSCFNGG 997
Query: 310 TCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVD 365
TC++ C+CPP TG CQ ++ NEC + C HG T H
Sbjct: 998 TCVDGINSFTCLCPPGFTGSYCQHDV--NEC----DSRPC---------LHGGTCHDSYG 1042
Query: 366 LIRCTCRQVY 375
CTC Q Y
Sbjct: 1043 TYTCTCPQGY 1052
Score = 73 (30.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 296 YQIFSCPDKCP---ENRTC-IN-NQCVCPPRRTGPDCQEEICPNECH 337
Y+ FSC CP + +TC I+ N+CV P R G CQ CH
Sbjct: 851 YESFSCA--CPAGWQGQTCEIDINECVKSPCRAGASCQNTNGSYRCH 895
Score = 72 (30.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 23/73 (31%), Positives = 31/73 (42%)
Query: 304 KCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRT 359
KC N TC++ C CPP G C+ ++ NEC L++ CD T + H
Sbjct: 1238 KCFNNGTCVDQVGGYSCSCPPGFVGERCEGDV--NEC---LSN-PCDARGTQNCVQHVNA 1291
Query: 360 LHYQVDLIRCTCR 372
H C CR
Sbjct: 1292 FH-------CECR 1297
Score = 72 (30.4 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 24/71 (33%), Positives = 30/71 (42%)
Query: 291 GFNATY---QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFL 340
G+ +Y Q+ C P C TC + C C G +C EE+ NEC
Sbjct: 1137 GYTGSYCEEQVDECSPSPCQNGATCTDYPGGYSCECVAGYHGVNCSEEV--NECLSQPCR 1194
Query: 341 NHGTC-DLLLT 350
N GTC DL T
Sbjct: 1195 NGGTCIDLTNT 1205
Score = 66 (28.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 20/64 (31%), Positives = 27/64 (42%)
Query: 290 EGFNATYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNECHEFLN 341
+G I C C +C N +C C TG +C+ +I C PN CH N
Sbjct: 863 QGQTCEIDINECVKSPCRAGASCQNTNGSYRCHCQAGYTGRNCETDIDDCRPNPCH---N 919
Query: 342 HGTC 345
G+C
Sbjct: 920 GGSC 923
Score = 60 (26.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/67 (31%), Positives = 27/67 (40%)
Query: 290 EGFNATYQIFSCPD-KCPENRTCI----NNQCVCPPRRTGPDCQ---EEICP--NECHEF 339
EG SC +C TCI + C+C TGP+CQ C N C+
Sbjct: 1342 EGATCENDARSCGSLRCLNGGTCIAGPRSPTCLCLGPFTGPECQFPASSPCVGGNPCY-- 1399
Query: 340 LNHGTCD 346
N G C+
Sbjct: 1400 -NQGVCE 1405
Score = 55 (24.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 17/63 (26%), Positives = 25/63 (39%)
Query: 291 GFNATY---QIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQEEICPNECHEFLNH 342
GF +Y + C + C TC ++ C CP TG +CQ + + N
Sbjct: 1013 GFTGSYCQHDVNECDSRPCLHGGTCHDSYGTYTCTCPQGYTGLNCQTLVRWCDSSPCKND 1072
Query: 343 GTC 345
G C
Sbjct: 1073 GRC 1075
Score = 54 (24.1 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 305 CPENRTCIN----NQCVCPPRRTGPDCQEEI--C-PNECHEFLNHGTC 345
C C+N ++C C TG C+E++ C P+ C N TC
Sbjct: 1117 CRNGGLCMNAGNTHRCHCQAGYTGSYCEEQVDECSPSPCQ---NGATC 1161
Score = 39 (18.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 316 CVCPPRRTGPDCQEEICPNECHE--FLNHGTC 345
C C TG C+ I N C + N G+C
Sbjct: 1294 CECRAGHTGRRCESVI--NGCKDRPCKNGGSC 1323
>UNIPROTKB|F1NCH8 [details] [associations]
symbol:F1NCH8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA]
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:AADN02026542 EMBL:AADN02026543 IPI:IPI00589777
Ensembl:ENSGALT00000006123 Uniprot:F1NCH8
Length = 1444
Score = 197 (74.4 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 42/114 (36%), Positives = 56/114 (49%)
Query: 61 DCSVNCLCNNHSTCVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKC-D 114
DC C C S C G +C C G C+ C G +G+ Q G R C
Sbjct: 755 DCKP-CPCPGRSPCTQLPSSGEVVCTHCPPGQRGKRCELCDDGFFGDPLGQRGPVRPCVP 813
Query: 115 CNSHGN---SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGD---PTDGGTC 161
C HGN + +G CDS++G C+ C NT G+ C++C PG+YGD P+ G C
Sbjct: 814 CQCHGNVDLNAVGNCDSVSGRCLRCLHNTTGEQCQQCRPGFYGDALAPSPAGKC 867
Score = 184 (69.8 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 48/117 (41%), Positives = 59/117 (50%)
Query: 44 KGP--PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSY 101
+GP P CQC G VD +N + N C G C C TTG+ CQ CR G Y
Sbjct: 805 RGPVRPCVPCQCH-G--NVD--LNAVGN----CDSVSGRCLRCLHNTTGEQCQQCRPGFY 855
Query: 102 GNATTQE--G-CRKCDCNSHGNSVLGV--CDSITGECICQDNTQGKNCERCLPGYYG 153
G+A G C C+CN G S LG+ CD TG+C+C + G+ C C GYYG
Sbjct: 856 GDALAPSPAGKCASCNCNPDG-SALGLEGCDPGTGQCLCLPHVLGRTCGLCQHGYYG 911
Score = 160 (61.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 41/120 (34%), Positives = 53/120 (44%)
Query: 42 YCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
+C+ P + G V C V C CN H C G C H+ T G C+ C G
Sbjct: 687 FCESCAPGFKRDIPFGGPFVTC-VPCTCNQHGDCEPLSGHCRCLHN-TEGPSCERCSPGF 744
Query: 101 YGNATT--QEGCRKCDCNSHGNSVLGVCDSITGECICQD---NTQGKNCERCLPGYYGDP 155
YGN T + C+ C C G S S +GE +C +GK CE C G++GDP
Sbjct: 745 YGNPFTGHPDDCKPCPCP--GRSPCTQLPS-SGEVVCTHCPPGQRGKRCELCDDGFFGDP 801
Score = 155 (59.6 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 46/154 (29%), Positives = 63/154 (40%)
Query: 62 CSVNCLCNNHST------CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDC 115
C+ +C CN + C G G C C G C C+ G YG GC+ C+C
Sbjct: 867 CA-SCNCNPDGSALGLEGCDPGTGQC-LCLPHVLGRTCGLCQHGYYG-LQAAVGCKSCEC 923
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDG---------GTCYYQCM 166
+ G+ G C ++TG+C CQ G C+RC G++G G G+ QC
Sbjct: 924 HPVGSQDSG-CHAVTGQCSCQPGVTGLRCDRCEHGFFGFSARGCRACNCSPLGSASAQCH 982
Query: 167 ARGM-LTGPGPQGLGSGLAERNAWEGKDTPSREC 199
L PG G + N + D PS C
Sbjct: 983 ENSTCLCRPGFVGYKCDRCQANFFP--DPPSSSC 1014
Score = 151 (58.2 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 30/80 (37%), Positives = 40/80 (50%)
Query: 84 CHDWTTGDHCQYCRAG-----SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
C TG C+ C G +G C C CN HG+ C+ ++G C C N
Sbjct: 679 CPPSYTGSFCESCAPGFKRDIPFGGPFVT--CVPCTCNQHGD-----CEPLSGHCRCLHN 731
Query: 139 TQGKNCERCLPGYYGDPTDG 158
T+G +CERC PG+YG+P G
Sbjct: 732 TEGPSCERCSPGFYGNPFTG 751
Score = 150 (57.9 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 35/117 (29%), Positives = 55/117 (47%)
Query: 37 KCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
+C + + +CQ C GV C ++ TC C TG C+
Sbjct: 366 QCRQNHYRWEQQAACQPCHCHPAGVPLRPQC--DSSGTCT--------CKANVTGWKCER 415
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C+ G Y ++ ++ GCR C C+ G+ +G CD TG C C++ +G C RC PG++
Sbjct: 416 CKDG-Y-HSLSEGGCRPCTCDPAGS--VGTCDPNTGHCTCKERVEGHLCNRCQPGWF 468
Score = 147 (56.8 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 43/145 (29%), Positives = 59/145 (40%)
Query: 53 CELGWTGVDCSVNCL-CNNH------STCVHGI-GICDECHDWTTGDHCQYCRAGSYGNA 104
C+ G+ G+ +V C C H S C H + G C C TG C C G +G +
Sbjct: 905 CQHGYYGLQAAVGCKSCECHPVGSQDSGC-HAVTGQCS-CQPGVTGLRCDRCEHGFFGFS 962
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQ 164
GCR C+C+ G S C C+C+ G C+RC ++ DP +C
Sbjct: 963 A--RGCRACNCSPLG-SASAQCHE-NSTCLCRPGFVGYKCDRCQANFFPDPPSS-SCQ-P 1016
Query: 165 CMARGMLTGPGPQGLGSGLAERNAW 189
C L G + L L E W
Sbjct: 1017 CPTCYGLVKDGVERLRVKLQEVEEW 1041
Score = 49 (22.3 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 315 QCVCPPRRTGPDCQ 328
+C CPP TG C+
Sbjct: 676 ECTCPPSYTGSFCE 689
Score = 48 (22.0 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 286 GKPSEGFNATYQIFSCPDKCPENRTCINNQCVC---PPRRTGPDCQEEIC 332
G P G + CP + P + + + VC PP + G C E+C
Sbjct: 746 GNPFTGHPDDCKPCPCPGRSPCTQLPSSGEVVCTHCPPGQRGKRC--ELC 793
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 300 SC-PDKCPENRTC--INNQCVCPPRRTGPDCQ 328
+C P C ++ C ++ C C GP C+
Sbjct: 707 TCVPCTCNQHGDCEPLSGHCRCLHNTEGPSCE 738
Score = 42 (19.8 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 21/75 (28%), Positives = 30/75 (40%)
Query: 3 IIFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCK--G-----PPDYS----C 51
++ ++ L T DD VL Y + S + + G CK G PD + C
Sbjct: 234 LLISLNRLNTFGDDIFKDPKVLQSYYYAIS---DFSVGGRCKCNGHASECAPDEAGRLVC 290
Query: 52 QCELGWTGVDCSVNC 66
CE G DC +C
Sbjct: 291 VCEHNTAGTDCQ-HC 304
Score = 40 (19.1 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 312 INNQCVCPPRRTGPDC 327
+ QC C P TG C
Sbjct: 936 VTGQCSCQPGVTGLRC 951
Score = 38 (18.4 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDC 327
S +C EN TC+ C P G C
Sbjct: 976 SASAQCHENSTCL-----CRPGFVGYKC 998
>UNIPROTKB|F1S663 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:CU914232 Ensembl:ENSSSCT00000016945
Uniprot:F1S663
Length = 1606
Score = 191 (72.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 49/131 (37%), Positives = 61/131 (46%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDW 87
+ C C+ GY + P LG C V C CN HS TC G+C+ C D
Sbjct: 695 YGGQFC-EMCLSGYRRETPS------LGPYS-PC-VLCTCNGHSETCDPETGVCN-CRDN 744
Query: 88 TTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNC 144
T G HC+ C G YG++T T C+ C C G+S V + C C T GK C
Sbjct: 745 TAGPHCEKCSDGYYGDSTVGTSSDCQPCPCPG-GSSCAVVPKTQEVVCTNCPTGTTGKRC 803
Query: 145 ERCLPGYYGDP 155
E C GY+GDP
Sbjct: 804 ELCDDGYFGDP 814
Score = 187 (70.9 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 52/165 (31%), Positives = 79/165 (47%)
Query: 16 DALSRCTVL----LLYIFNASLCY-NKCIYGYCKGP--PDYSCQCELGWTGVDCSVNCLC 68
+A+ C L L I+N + Y ++C G+ P P+ + +C+ DC+
Sbjct: 836 NAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCK----ACDCNPYGTV 891
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
S+C G C EC TG C C G Y N + +GC++C+C++ G S G CD
Sbjct: 892 KQQSSCNPVTGQC-ECLPHVTGRDCGACDPGFY-NLQSGQGCKRCECHALG-STNGQCDV 948
Query: 129 ITGECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCMARGMLT 172
TG+C CQ G++CERC ++G +G C C G L+
Sbjct: 949 HTGQCECQPGITGQHCERCEVNHFGFGPEGCKPC--DCHPEGALS 991
Score = 183 (69.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 38/94 (40%), Positives = 52/94 (55%)
Query: 62 CSVNCLCN---NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
CS C C+ + ST G C C GD C C+ G Y ++ T+ GCR C CN
Sbjct: 394 CSP-CHCSPVGSLSTQCDSYGRCS-CKPGVMGDKCDRCQPG-Y-HSLTEAGCRPCSCNPS 449
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
G++ C+ TG C+C+DN +G NCERC PG++
Sbjct: 450 GST--DECNVETGRCVCKDNVEGFNCERCKPGFF 481
Score = 177 (67.4 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 34 CYNKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCV-----HGIGICDECHDW 87
C + +C+ D Y +G T DC C C S+C + +C C
Sbjct: 741 CRDNTAGPHCEKCSDGYYGDSTVG-TSSDCQP-CPCPGGSSCAVVPKTQEV-VCTNCPTG 797
Query: 88 TTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQG 141
TTG C+ C G +G+ + G CR C CN + + + +G C+ +TGEC+ C NT G
Sbjct: 798 TTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLKCIYNTAG 857
Query: 142 KNCERCLPGYYGDP 155
C+RC G++G+P
Sbjct: 858 FYCDRCKDGFFGNP 871
Score = 168 (64.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 36/116 (31%), Positives = 53/116 (45%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNSH 118
C+ N N C G C +C T G +C C+ G +GN + C+ CDCN +
Sbjct: 829 CNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPY 888
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
G C+ +TG+C C + G++C C PG+Y + G +C A G G
Sbjct: 889 GTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCKRCECHALGSTNG 944
Score = 156 (60.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 32/73 (43%), Positives = 38/73 (52%)
Query: 90 GDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C+ C +G Y T G C C CN H + CD TG C C+DNT G +CE
Sbjct: 697 GQFCEMCLSG-YRRETPSLGPYSPCVLCTCNGHSET----CDPETGVCNCRDNTAGPHCE 751
Query: 146 RCLPGYYGDPTDG 158
+C GYYGD T G
Sbjct: 752 KCSDGYYGDSTVG 764
Score = 151 (58.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 37/113 (32%), Positives = 51/113 (45%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC-VHGIGICDECHDWTTGDHCQYCRAG 99
G C P Y+ Q G +C + L + + C VH G C EC TG HC+ C
Sbjct: 916 GACD-PGFYNLQSGQGCKRCEC--HALGSTNGQCDVH-TGQC-ECQPGITGQHCERCEVN 970
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G EGC+ CDC+ G L D G C C++ G C++C Y+
Sbjct: 971 HFGFGP--EGCKPCDCHPEGALSLQCKDD--GRCECREGFVGNRCDQCEENYF 1019
Score = 120 (47.3 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 40/125 (32%), Positives = 48/125 (38%)
Query: 66 CLCNNH-STCVHGIG---ICDECHDWTTGDHCQYC------RAGSYGNATTQEGCRKCDC 115
C CN H S CV +C+ C T G C+ C R A + C CDC
Sbjct: 285 CKCNGHASECVKNEFDKLVCN-CKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDC 343
Query: 116 NSHGNSV-----LGVCDSITGECI-CQDNTQGKNCERCLPGYY--GDPTDGGTCYYQCMA 167
N L G C CQDNT G NCERC Y+ G+ C+ C
Sbjct: 344 NGRSQECYFDPELYRSTGHGGHCTNCQDNTDGPNCERCRENYFRLGNREACSPCH--CSP 401
Query: 168 RGMLT 172
G L+
Sbjct: 402 VGSLS 406
Score = 49 (22.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 312 INNQCVCPPRRTGPDC 327
+ QC C P TG DC
Sbjct: 900 VTGQCECLPHVTGRDC 915
Score = 45 (20.9 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 19/64 (29%), Positives = 25/64 (39%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTGVHITHGRTLHYQVDLIRCTCR 372
QC C P TG C+ C F G CD H +L + D RC CR
Sbjct: 952 QCECQPGITGQHCER--CEVNHFGFGPEGCKPCDC-----HPEGALSLQCKDDG-RCECR 1003
Query: 373 QVYL 376
+ ++
Sbjct: 1004 EGFV 1007
Score = 39 (18.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 12/49 (24%), Positives = 20/49 (40%)
Query: 283 YKQGKPSEGFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQE 329
Y++ PS G + + +C + TC C C GP C++
Sbjct: 707 YRRETPSLGPYSPCVLCTCNG---HSETCDPETGVCNCRDNTAGPHCEK 752
>UNIPROTKB|F1LWK9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
IPI:IPI00948119 Ensembl:ENSRNOT00000066218 ArrayExpress:F1LWK9
Uniprot:F1LWK9
Length = 457
Score = 163 (62.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 40/101 (39%), Positives = 50/101 (49%)
Query: 65 NCLCNNHST-CVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EG-CRKCDC 115
NC C HS C + IC C T G HC+ CR G + NA+ Q E C +C C
Sbjct: 281 NCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIECYC 340
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG---YYG 153
N G S+ C+ +G C C+ T G C+ CLPG YYG
Sbjct: 341 NPLG-SIHDRCNG-SGFCECKTGTTGPKCDECLPGNSWYYG 379
Score = 97 (39.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 29/118 (24%), Positives = 49/118 (41%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
C+Y K +C+CE TG DC C N W+ G + +
Sbjct: 224 CVYDNSK----LTCECEHNTTGPDCG-KCKKNYQG------------RPWSPGSYLPIPK 266
Query: 98 AGSYGNATTQEGCRKCDCNSHGN--SVLGVCDSITGECI-CQDNTQGKNCERCLPGYY 152
+ + C+C H N S + + +++ C+ C+ NT+G++CE C GY+
Sbjct: 267 GTANTCIPSISSIGNCECFGHSNRCSYIDLLNTVI--CVSCKHNTRGQHCELCRLGYF 322
Score = 76 (31.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 20/60 (33%), Positives = 24/60 (40%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVY 375
C C TGP C E + N + CD L +H +G T H V RC C Y
Sbjct: 356 CECKTGTTGPKCDECLPGNSWYYGCQPNVCDNEL--LHCQNGGTCHNNV---RCVCPDAY 410
Score = 65 (27.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 305 CPENRTCINN-QCVCPPRRTGPDCQEEIC 332
C TC NN +CVCP TG C++ C
Sbjct: 392 CQNGGTCHNNVRCVCPDAYTGILCEKLRC 420
>UNIPROTKB|F1NI05 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00822825
Ensembl:ENSGALT00000039414 ArrayExpress:F1NI05 Uniprot:F1NI05
Length = 1007
Score = 192 (72.6 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 43/96 (44%), Positives = 50/96 (52%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGN 120
V C CN HS TC G+CD C D T G HC+ C G YG+AT T C+ C C G+
Sbjct: 477 VPCTCNGHSETCDPETGMCD-CRDNTAGSHCEKCSDGYYGDATAGTALDCQPCPCPG-GS 534
Query: 121 SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
S V + C CQ T GK CE C Y+GDP
Sbjct: 535 SCAVVPRTKEVVCTSCQTGTTGKRCELCDDAYFGDP 570
Score = 184 (69.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 44/133 (33%), Positives = 66/133 (49%)
Query: 41 GYCKGPPDYS----CQ-CELGWTGVDCSVNCL---CN---NHSTCVHGIGICDECHDWTT 89
G+C G D + C+ C + + CL CN + ST G C C
Sbjct: 120 GHCMGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCS-CKPGVM 178
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
G+ C C+ G + + ++ GCR C CN G++ G C+ TG C C+DN +G +CERC P
Sbjct: 179 GEKCDRCQPGFH--SLSEAGCRPCSCNPAGST--GECNMETGRCTCKDNVEGFHCERCKP 234
Query: 150 GYYG-DPTDGGTC 161
G++ DP++ C
Sbjct: 235 GFFHLDPSNPRGC 247
Score = 173 (66.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 42/133 (31%), Positives = 62/133 (46%)
Query: 34 CYNKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCV----HGIGICDECHDWT 88
C + +C+ D Y G T +DC C C S+C +C C T
Sbjct: 497 CRDNTAGSHCEKCSDGYYGDATAG-TALDCQP-CPCPGGSSCAVVPRTKEVVCTSCQTGT 554
Query: 89 TGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGK 142
TG C+ C +G+ + G CR C CN + + + +G C+ TGEC+ C NT G
Sbjct: 555 TGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQTGECLKCIYNTAGF 614
Query: 143 NCERCLPGYYGDP 155
C+RC G++G+P
Sbjct: 615 YCDRCKDGFFGNP 627
Score = 170 (64.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 44/132 (33%), Positives = 56/132 (42%)
Query: 37 KCIYG----YCKGPPDYSCQCELGWTGVDCSVNCLCNNHST------CVHGIGICDECHD 86
KCIY YC D L D C CN + T C G C EC
Sbjct: 606 KCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQC-ECLS 664
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
T C C G + N + GC +CDC++ G S G CD TG+C CQ G+ C+R
Sbjct: 665 HVTERDCSACEPGFF-NLQSGRGCERCDCHALG-STNGQCDIWTGQCECQPGVTGQRCDR 722
Query: 147 CLPGYYGDPTDG 158
C ++G +G
Sbjct: 723 CEANHFGFGPEG 734
Score = 159 (61.0 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 36/116 (31%), Positives = 53/116 (45%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGN--ATTQ-EGCRKCDCNSH 118
C+ N N C G C +C T G +C C+ G +GN AT + CR C CN +
Sbjct: 585 CNDNIDPNAVGNCNRQTGECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPY 644
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
G + C+ +TG+C C + ++C C PG++ + G C A G G
Sbjct: 645 GTVNQQTSCNQVTGQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNG 700
Score = 155 (59.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 32/73 (43%), Positives = 37/73 (50%)
Query: 90 GDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C+ C G Y T G C C CN H + CD TG C C+DNT G +CE
Sbjct: 453 GQFCERCSPG-YRRETPGLGPYSPCVPCTCNGHSET----CDPETGMCDCRDNTAGSHCE 507
Query: 146 RCLPGYYGDPTDG 158
+C GYYGD T G
Sbjct: 508 KCSDGYYGDATAG 520
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/110 (30%), Positives = 49/110 (44%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG 102
C+ P ++ Q G DC + L + + C G C EC TG C C A +G
Sbjct: 674 CE-PGFFNLQSGRGCERCDC--HALGSTNGQCDIWTGQC-ECQPGVTGQRCDRCEANHFG 729
Query: 103 NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
EGC+ CDC+ G+ L C G C C++ G C++C Y+
Sbjct: 730 FGP--EGCKPCDCDPEGSRALQ-CRE-DGRCECKEGFVGSRCDQCEENYF 775
Score = 133 (51.9 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 38/123 (30%), Positives = 51/123 (41%)
Query: 66 CLCNNH-STCVHG-IG--ICDECHDWTTGDHCQYC------RAGSYGNATTQEGCRKCDC 115
C CN H S C+ +G +C+ C T GD C+ C R A + C CDC
Sbjct: 41 CKCNGHASECIRNELGKLVCN-CKHNTFGDDCEKCLPFFNDRPWRRATAESANECLPCDC 99
Query: 116 NSHGNSV-----LGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
N L G C+ C+DNT G +CERC +Y ++ G C G
Sbjct: 100 NGRSQECYFDPELYRSTGHGGHCMGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVG 159
Query: 170 MLT 172
L+
Sbjct: 160 SLS 162
Score = 43 (20.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 19/64 (29%), Positives = 24/64 (37%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTGVHITHGRTLHYQVDLIRCTCR 372
QC C P TG C C F G CD G R L + D RC C+
Sbjct: 708 QCECQPGVTGQRCDR--CEANHFGFGPEGCKPCDCDPEG-----SRALQCREDG-RCECK 759
Query: 373 QVYL 376
+ ++
Sbjct: 760 EGFV 763
Score = 43 (20.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 16/58 (27%), Positives = 20/58 (34%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCR 372
QC C P G C C H L+ C G T ++ RCTC+
Sbjct: 170 QCSCKPGVMGEKCDR--CQPGFHS-LSEAGCRPCSCN---PAGSTGECNMETGRCTCK 221
Score = 40 (19.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 310 TCINNQCVCPPRRTGPDCQEEICPNECHE 338
TC + C P DC++ + C +
Sbjct: 480 TCNGHSETCDPETGMCDCRDNTAGSHCEK 508
>UNIPROTKB|F1SB08 [details] [associations]
symbol:F1SB08 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
GO:GO:0016021 GO:GO:0007275 GO:GO:0030154 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985 OMA:VCMPGFT
EMBL:CU467688 Ensembl:ENSSSCT00000007349 Uniprot:F1SB08
Length = 2175
Score = 194 (73.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 94/340 (27%), Positives = 133/340 (39%)
Query: 36 NKCIYGYCKGP-PDYSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGD 91
N CI+G C G Y C C+ GW G++C V+ CL + C +G G CD G
Sbjct: 431 NPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSD---PCQNG-GTCDNL---VNGY 483
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLP 149
C C+ G G+ Q +C N N G C D I+G C C GKNC+ L
Sbjct: 484 RCT-CKKGFKGH-NCQVNIDECASNPCLNQ--GTCFDDISGYTCHCVLPYTGKNCQTVLA 539
Query: 150 GYYGDPTDGGTCYYQCM---ARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECL--WIIG 204
+P + + + L PG QG +R + + + S+ C+ +
Sbjct: 540 PCSPNPCENAAVCKEAPNFESYTCLCAPGWQG------QRCSVDIDECISKPCMNHGLCH 593
Query: 205 QSLDSNST-APADIILLRLQPDINV----PCNENAVYIYDGLPDF-VTSVGGTHQSTTLG 258
+ S P + + DI+ PC +N DG+ F + G +G
Sbjct: 594 NTQGSYMCECPPGFSGMDCEEDIDDCLANPC-QNGGSCIDGVNTFSCLCLPGF-----IG 647
Query: 259 VFCTEDMHRGYEVLEAKSGVMTIHYKQG---KPSEGFNATY---QIFSCPDK-CPENRTC 311
C DM+ K+G Y K GF+ + I C + C TC
Sbjct: 648 DKCQTDMNECLSE-PCKNGGTCSDYVNSYTCKCQAGFDGVHCENNIDECTESSCFNGGTC 706
Query: 312 INN----QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
++ C+CP TGP C EI NEC H LN G C
Sbjct: 707 VDGLNSFSCLCPVGFTGPFCLHEI--NECNSHPCLNEGIC 744
Score = 150 (57.9 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 94/371 (25%), Positives = 140/371 (37%)
Query: 34 CYNKCIYGYCKGPPD---YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTT 89
C N + CK P+ Y+C C GW G CSV+ C + HG+ CH+ T
Sbjct: 546 CENAAV---CKEAPNFESYTCLCAPGWQGQRCSVDIDECISKPCMNHGL-----CHN-TQ 596
Query: 90 GDHCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERC 147
G + C G G ++ C C + G+ + GV T C+C G C+
Sbjct: 597 GSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCIDGVN---TFSCLCLPGFIGDKCQTD 653
Query: 148 LPGYYGDPT-DGGTC--Y---YQCMARGMLTGPGPQGLGSGLAERNAWEG----KDTPSR 197
+ +P +GGTC Y Y C + G + E + + G S
Sbjct: 654 MNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNIDECTESSCFNGGTCVDGLNSF 713
Query: 198 ECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDF--VTSVGGTHQST 255
CL +G T P L + + PC + + DGL + + +G T ++
Sbjct: 714 SCLCPVG------FTGP--FCLHEINECNSHPCLNEGICV-DGLGTYRCICPLGYTGKNC 764
Query: 256 -TLGVFCTED--MHRGYEVLE-AKSGVMTIHYKQGK----PSEGFNATYQIFSCP-DK-C 305
TL C+ ++G V E A+S + G PS P D+ C
Sbjct: 765 QTLVNLCSRSPCKNKGTCVQEKAESRCLCPSGWAGAYCDVPSVSCEVAASHRGVPVDRLC 824
Query: 306 PENRTCIN----NQCVCPPRRTGPDCQEEICPNECHEF-LNHG-TCDLLLTGVHIT---- 355
+ CIN + C CP TG C+E++ +EC HG TC + G
Sbjct: 825 QHSGVCINAGNSHHCQCPLGYTGSYCEEQL--DECSSNPCQHGATCRDFIGGYRCECVPG 882
Query: 356 -HGRTLHYQVD 365
G Y+VD
Sbjct: 883 YQGVNCEYEVD 893
Score = 136 (52.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 86/351 (24%), Positives = 128/351 (36%)
Query: 34 CYNK-CI-YGYCKGPP-DYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGICD-E 83
C +K C+ +G C Y C+C G++G+DC + CL C N +C+ G+
Sbjct: 581 CISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCIDGVNTFSCL 640
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCD-CNSHGNSVLGVCDSITGECICQDNTQGK 142
C GD CQ + N E C+ C+ + NS C + C++N
Sbjct: 641 CLPGFIGDKCQ-----TDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNIDEC 695
Query: 143 NCERCLPGYYGDPTDGGTCYYQCMARGMLTGP------GPQGLGSGLAERNAWEGKDTPS 196
C G G DG + C+ TGP L E +G T
Sbjct: 696 TESSCFNG--GTCVDGLNSF-SCLCPVGFTGPFCLHEINECNSHPCLNEGICVDGLGTYR 752
Query: 197 REC-LWIIGQS------LDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVG 249
C L G++ L S S ++ + + C Y +P V
Sbjct: 753 CICPLGYTGKNCQTLVNLCSRSPCKNKGTCVQEKAESRCLCPSGWAGAYCDVPSVSCEVA 812
Query: 250 GTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATY---QIFSCPDK-C 305
+H+ + C H G + S H+ Q P G+ +Y Q+ C C
Sbjct: 813 ASHRGVPVDRLC---QHSGVCINAGNS-----HHCQC-PL-GYTGSYCEEQLDECSSNPC 862
Query: 306 PENRTC---INN-QCVCPPRRTGPDCQEEI--CPNE-CHEFLNHGTC-DLL 348
TC I +C C P G +C+ E+ C N+ C N GTC DL+
Sbjct: 863 QHGATCRDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQ---NGGTCIDLV 910
Score = 119 (46.9 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 44/166 (26%), Positives = 66/166 (39%)
Query: 24 LLLYIFNASLCYNKCIYG-YCKGPP---DYSCQCELGWTGVDCSVN---CLCNNHSTCVH 76
LL ++ +A + N C G C P Y C C G+ G DC+ + C N + C H
Sbjct: 83 LLCHLDDACIS-NPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEH 141
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECI 134
+C + HC+ C G Y + +C + N C D I G C+
Sbjct: 142 A----GKCVNTDGAFHCE-CLKG-YAGPRCEMDINECHSDPCQNDA--TCLDKIGGFTCL 193
Query: 135 CQDNTQGKNCERCLPGYYGDP-TDGGTCY-----YQCMARGMLTGP 174
C +G +CE + +P + G C +QC+ TGP
Sbjct: 194 CMPGFKGVHCELEINECQSNPCVNSGQCVDKVNRFQCLCPPGFTGP 239
Score = 109 (43.4 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 39/137 (28%), Positives = 56/137 (40%)
Query: 41 GYCKG-PPDYSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
G+ K PDY+C C + GV+C +N C N CVHG+ C D C C
Sbjct: 324 GFLKDFKPDYACDCFPHFAGVNCEINFDDCASN---PCVHGV-----CVDGVNRYSC-VC 374
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNC----ERCL--P 149
G G + +C N + D + G C+C + +C CL P
Sbjct: 375 SPGFTGQRCNID-IDECASNPCRKGATCIND-VNGFRCMCPEGPHHPSCYSQVNECLSNP 432
Query: 150 GYYGDPTDGGTCYYQCM 166
+G+ T GG Y+C+
Sbjct: 433 CIHGNCT-GGLSGYKCL 448
Score = 73 (30.8 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 21/67 (31%), Positives = 28/67 (41%)
Query: 291 GFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNEC-HEFLNHGT 344
G I C C + TCIN+ +C+CP P C ++ NEC HG
Sbjct: 380 GQRCNIDIDECASNPCRKGATCINDVNGFRCMCPEGPHHPSCYSQV--NECLSNPCIHGN 437
Query: 345 CDLLLTG 351
C L+G
Sbjct: 438 CTGGLSG 444
Score = 64 (27.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 21/60 (35%), Positives = 28/60 (46%)
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTGVHIT--HGRTLHY-QVDLIRC 369
+C+C G +C E+ NEC N GTCD L+ G T G H QV++ C
Sbjct: 446 KCLCDAGWVGINC--EVDKNECLSDPCQNGGTCDNLVNGYRCTCKKGFKGHNCQVNIDEC 503
>UNIPROTKB|E1C700 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005608
"laminin-3 complex" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA]
GO:GO:0050808 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005608 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:QPYCIVS EMBL:AADN02014165 EMBL:AADN02014166
EMBL:AADN02014167 EMBL:AADN02014168 EMBL:AADN02014169
EMBL:AADN02014170 IPI:IPI00820014 ProteinModelPortal:E1C700
Ensembl:ENSGALT00000036239 ArrayExpress:E1C700 Uniprot:E1C700
Length = 1773
Score = 194 (73.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 51/143 (35%), Positives = 61/143 (42%)
Query: 39 IYGYC---KGPPDYSC-QCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHC 93
I G C +G C +C+ G G C CN H+ C G C C D T G+ C
Sbjct: 823 ITGQCPCRQGAHGSRCDRCQPGHWGFPTCRPCQCNGHAEECDPQTGSCLRCRDHTDGERC 882
Query: 94 QYCRAGSYGNATTQEG--CRKCDC-NSHGNS--VLGVC--DSITGE--CICQDNTQGKNC 144
Q C AG +GN G CR C C + G C D + + C C G C
Sbjct: 883 QRCAAGHFGNPALGSGQHCRPCPCPDGPGGPRHFAASCYQDGRSRQVVCHCSPGYTGPRC 942
Query: 145 ERCLPGYYGDPTD-GGTCY-YQC 165
+ C PGYYGDP GG C QC
Sbjct: 943 DECAPGYYGDPLQPGGHCRPCQC 965
Score = 186 (70.5 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 46/131 (35%), Positives = 61/131 (46%)
Query: 66 CLCNNH----STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
CLC+ + C G C C G C C G++G GCR C C+ G S
Sbjct: 760 CLCDPQGLLSAECQPQGGQC-RCKPNVVGRRCHRCSPGTFGFGPG--GCRPCQCSGEG-S 815
Query: 122 VLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS 181
+ VCD+ITG+C C+ G C+RC PG++G PT C C G PQ GS
Sbjct: 816 LSAVCDTITGQCPCRQGAHGSRCDRCQPGHWGFPT----CR-PCQCNGHAEECDPQ-TGS 869
Query: 182 GLAERNAWEGK 192
L R+ +G+
Sbjct: 870 CLRCRDHTDGE 880
Score = 165 (63.1 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 37/123 (30%), Positives = 55/123 (44%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
++C GY P C C N + C G C C T G HC
Sbjct: 943 DECAPGYYGDPLQPGGHCR----PCQCHNNIDTTDPEACDRRTGQCLRCLYNTAGPHCAE 998
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGN--SVLGV----CDSITGECICQDNTQGKNCERCLP 149
C+ G YG+A + CR+C CN+ G + G CD +G+C C + +G++C+RC P
Sbjct: 999 CQPGYYGDAM-RHSCRRCSCNTLGTDPNTCGPQQCQCDQRSGQCHCLPHVEGQSCDRCSP 1057
Query: 150 GYY 152
++
Sbjct: 1058 NFW 1060
Score = 158 (60.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 29/89 (32%), Positives = 50/89 (56%)
Query: 68 CNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLG 124
C+ H+ G+ G C C + G C C+ G+YG + +GC++C C+ G G
Sbjct: 405 CDAHTDVALGMIAGQC-RCKENVAGPRCDRCQHGAYGLSQGDPQGCQRCLCDPRGTVADG 463
Query: 125 V-CDSITGECICQDNTQGKNCERCLPGYY 152
CD I+G+C+C+ G++C++CLP ++
Sbjct: 464 SQCDPISGDCLCKRLVTGRSCDQCLPEHW 492
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/158 (27%), Positives = 68/158 (43%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVD-------CSVNCLCNNHSTCVHGIGICDE----CH 85
+C+Y GP + +C+ G+ G CS N L + +TC CD+ CH
Sbjct: 986 RCLYNTA-GP--HCAECQPGYYGDAMRHSCRRCSCNTLGTDPNTCGPQQCQCDQRSGQCH 1042
Query: 86 --DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
G C C + ++ N + +GC C C+ +S+ C+ TG+C C+ G+
Sbjct: 1043 CLPHVEGQSCDRC-SPNFWNLGSGQGCEPCACHPQ-HSLSPACNQFTGQCSCRPGFGGRT 1100
Query: 144 CERCLPGYYGDPT-DGGTCYYQCMARGMLTGPGPQGLG 180
C C ++GDP C C RG+ + G G
Sbjct: 1101 CANCQEQHWGDPRLQCRAC--DCDPRGIASTQCHHGSG 1136
Score = 135 (52.6 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 34/106 (32%), Positives = 45/106 (42%)
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQ----EGCRKCDCNSHGNSVLGVCDS------- 128
+CD C T G C C+ Y + + C CDC+ G+ G CD+
Sbjct: 355 VCDGCQHNTMGRRCHLCKPFYYRHPRSDIRAPTACVPCDCDPAGSLDGGACDAHTDVALG 414
Query: 129 -ITGECICQDNTQGKNCERCLPGYYG----DPTDGGTCYYQCMARG 169
I G+C C++N G C+RC G YG DP C C RG
Sbjct: 415 MIAGQCRCKENVAGPRCDRCQHGAYGLSQGDPQGCQRCL--CDPRG 458
Score = 125 (49.1 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 28/93 (30%), Positives = 41/93 (44%)
Query: 66 CLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHG 119
CLC+ T G CD C TG C C + + GC+ C+C+ G
Sbjct: 452 CLCDPRGTVADG-SQCDPISGDCLCKRLVTGRSCDQCLPEHWALSHDLPGCQPCECDV-G 509
Query: 120 NSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+ C TG+C C+ + G+ CE+ PG+Y
Sbjct: 510 GAHDNQCAMETGQCRCRSHIVGRQCEQVEPGFY 542
Score = 47 (21.6 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 316 CVCPPRRTGPDCQE 329
C C P TGP C E
Sbjct: 931 CHCSPGYTGPRCDE 944
Score = 46 (21.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 302 PDKC-PENRTCI--NNQCVCPPRRTGPDCQEEICPN 334
P+ C P+ C + QC C P G C + PN
Sbjct: 1024 PNTCGPQQCQCDQRSGQCHCLPHVEGQSC-DRCSPN 1058
Score = 42 (19.8 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 16/49 (32%), Positives = 19/49 (38%)
Query: 309 RTCIN--NQCVCPPRRT--GPDCQEE-ICPNECHEFLNHGTCDLLLTGV 352
RTC N Q PR DC I +CH H C ++GV
Sbjct: 1099 RTCANCQEQHWGDPRLQCRACDCDPRGIASTQCHHGSGHCDCRPGISGV 1147
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 312 INNQCVCPPRRTGPDCQEEICPNECHEFLNH 342
I+ C+C TG C + C E H L+H
Sbjct: 469 ISGDCLCKRLVTGRSCDQ--CLPE-HWALSH 496
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 315 QCVCPPRRT---GPDCQEEICPNECHEFLNHGTCDLLL 349
+C+C PR T G C C + +CD L
Sbjct: 451 RCLCDPRGTVADGSQCDPISGDCLCKRLVTGRSCDQCL 488
>UNIPROTKB|Q5VY43 [details] [associations]
symbol:PEAR1 "Platelet endothelial aggregation receptor 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0043654 "recognition of apoptotic cell" evidence=IEA]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 EMBL:AL356104 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 EMBL:AL158169 HOVERGEN:HBG108333
EMBL:AK074121 IPI:IPI00154858 RefSeq:NP_001073940.1
UniGene:Hs.142003 HSSP:P01133 ProteinModelPortal:Q5VY43 SMR:Q5VY43
IntAct:Q5VY43 STRING:Q5VY43 PhosphoSite:Q5VY43 DMDM:74757035
PRIDE:Q5VY43 DNASU:375033 Ensembl:ENST00000292357
Ensembl:ENST00000338302 GeneID:375033 KEGG:hsa:375033
UCSC:uc001fqj.1 CTD:375033 GeneCards:GC01P156865 H-InvDB:HIX0001178
HGNC:HGNC:33631 HPA:HPA035217 MIM:610278 neXtProt:NX_Q5VY43
PharmGKB:PA162399233 eggNOG:NOG320509 InParanoid:Q5VY43 OMA:PPGTWGF
OrthoDB:EOG451DPW GenomeRNAi:375033 NextBio:100378
ArrayExpress:Q5VY43 Bgee:Q5VY43 CleanEx:HS_PEAR1
Genevestigator:Q5VY43 Uniprot:Q5VY43
Length = 1037
Score = 168 (64.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 61/196 (31%), Positives = 76/196 (38%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------------CNNHSTCV 75
F LC +C++G C P CQC GW G DCS C C N+S+C
Sbjct: 100 FCVPLCAQECVHGRCVAPNQ--CQCVPGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCD 157
Query: 76 HGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGEC 133
G+C C +C Q C G YG A C+ +C C HG CD TG C
Sbjct: 158 PKSGVCS-CPSGLQPPNCLQPCTPGYYGPA-----CQFRCQC--HG----APCDPQTGAC 205
Query: 134 ICQDNTQGKNCE-RCLPGYYGDPTDGGTC--YYQCMARGMLTGP-G----PQGLGSGLAE 185
C G +C+ C G T G C + C G+ P G P G +
Sbjct: 206 FCPAERTGPSCDVSCSQG-----TSGFFCPSTHSCQNGGVFQTPQGSCSCPPGWMGTICS 260
Query: 186 RNAWEGKDTP--SREC 199
EG P S+EC
Sbjct: 261 LPCPEGFHGPNCSQEC 276
Score = 162 (62.1 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 40/124 (32%), Positives = 56/124 (45%)
Query: 46 PPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICD------ECHDWTTGDH 92
P + C C GW G+ C+ +C C H C+HG G+C +C TG H
Sbjct: 375 PMNGECSCLPGWAGLHCNESCPQDTHGPGCQEHCLCLHG-GVCQATSGLCQCAPGYTGPH 433
Query: 93 C-QYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLP 149
C C +YG N + +C C N++ C I GEC+C++ Q NC C P
Sbjct: 434 CASLCPPDTYGVNCSA-----RCSCE---NAI--ACSPIDGECVCKEGWQRGNCSVPCPP 483
Query: 150 GYYG 153
G +G
Sbjct: 484 GTWG 487
Score = 157 (60.3 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 47/155 (30%), Positives = 61/155 (39%)
Query: 34 CYNKCIYGYCKG--PPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVHGI 78
C ++C + G P CQC+ GW G V+CS C C N TC+
Sbjct: 533 CASRCDCDHSDGCDPVHGRCQCQAGWMGARCHLSCPEGLWGVNCSNTCTCKNGGTCLPEN 592
Query: 79 GICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C C G CQ C+ G YG C C C +H C G C C
Sbjct: 593 GNC-VCAPGFRGPSCQRSCQPGRYGKR-----CVPCKCANHS-----FCHPSNGTCYCLA 641
Query: 138 NTQGKNCER-CLPGYYGDPT-------DGGTCYYQ 164
G +C + C PG++G+ GGTC+ Q
Sbjct: 642 GWTGPDCSQPCPPGHWGENCAQTCQCHHGGTCHPQ 676
Score = 149 (57.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 39/121 (32%), Positives = 50/121 (41%)
Query: 41 GYCKGPPDY-----SCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-Q 94
G C PP + S C G+ G +CS C C+N C G C C TGD C +
Sbjct: 246 GSCSCPPGWMGTICSLPCPEGFHGPNCSQECRCHNGGLCDRFTGQC-RCAPGYTGDRCRE 304
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLP-GYY 152
C G +G Q+ CDC C G C+C+ G C +R P G+Y
Sbjct: 305 ECPVGRFG----QDCAETCDCAPDAR-----CFPANGACLCEHGFTGDRCTDRLCPDGFY 355
Query: 153 G 153
G
Sbjct: 356 G 356
Score = 145 (56.1 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 45/144 (31%), Positives = 56/144 (38%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N LC G C+ P Y+ C +C +G G DC+ C C + C G C C
Sbjct: 280 NGGLCDR--FTGQCRCAPGYTGDRCREECPVGRFGQDCAETCDCAPDARCFPANGAC-LC 336
Query: 85 HDWTTGDHC--QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
TGD C + C G YG + Q C CD H S C + GEC C G
Sbjct: 337 EHGFTGDRCTDRLCPDGFYG-LSCQAPCT-CD-REHSLS----CHPMNGECSCLPGWAGL 389
Query: 143 NCERCLPGYYGDPTDGGTCYYQCM 166
+C P T G C C+
Sbjct: 390 HCNESCP----QDTHGPGCQEHCL 409
Score = 138 (53.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 54/170 (31%), Positives = 69/170 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICD 82
NAS C +C + P +C C GW G C + C C + C H G CD
Sbjct: 491 NAS-C--QCAHEAVCSPQTGACTCTPGWHGAHCQLPCPKGQFGEGCASRCDCDHSDG-CD 546
Query: 83 ECHDWTTGDHCQYCRAGSYG---NATTQEGCRKCDC-NSHGNSVLGVCDSITGECICQDN 138
H CQ C+AG G + + EG +C N+ G C G C+C
Sbjct: 547 PVHG-----RCQ-CQAGWMGARCHLSCPEGLWGVNCSNTCTCKNGGTCLPENGNCVCAPG 600
Query: 139 TQGKNCER-CLPGYYGD---PT----------DGGTCYYQCMARGMLTGP 174
+G +C+R C PG YG P GTCY C+A G TGP
Sbjct: 601 FRGPSCQRSCQPGRYGKRCVPCKCANHSFCHPSNGTCY--CLA-GW-TGP 646
Score = 127 (49.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 39/127 (30%), Positives = 53/127 (41%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC--VHGIGICDECHDWT 88
+ LC +C GY GP S C GV+CS C C N C + G +C E W
Sbjct: 420 SGLC--QCAPGYT-GPHCASL-CPPDTYGVNCSARCSCENAIACSPIDGECVCKE--GWQ 473
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-C 147
G+ C G++G + C C +H VC TG C C G +C+ C
Sbjct: 474 RGNCSVPCPPGTWGFSCNAS----CQC-AHE----AVCSPQTGACTCTPGWHGAHCQLPC 524
Query: 148 LPGYYGD 154
G +G+
Sbjct: 525 PKGQFGE 531
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 37/112 (33%), Positives = 48/112 (42%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
CY C+ G+ GP D S C G G +C+ C C++ TC G C WT G HC
Sbjct: 637 CY--CLAGWT-GP-DCSQPCPPGHWGENCAQTCQCHHGGTCHPQDGSCICPLGWT-GHHC 691
Query: 94 -QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
+ C G++G +Q C C G C TG C+C G C
Sbjct: 692 LEGCPLGTFGANCSQP----CQCGP-GEK----CHPETGACVCPPGHSGAPC 734
Score = 69 (29.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 305 CPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
C TC+ N CVC P GP CQ P
Sbjct: 582 CKNGGTCLPENGNCVCAPGFRGPSCQRSCQP 612
Score = 67 (28.6 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 24/72 (33%), Positives = 26/72 (36%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRT 359
P KC + C N C C TGPDC + P E TC H HG T
Sbjct: 621 PCKCANHSFCHPSNGTCYCLAGWTGPDCSQPCPPGHWGENCAQ-TCQC-----H--HGGT 672
Query: 360 LHYQVDLIRCTC 371
H Q C C
Sbjct: 673 CHPQDG--SCIC 682
Score = 66 (28.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 17/46 (36%), Positives = 20/46 (43%)
Query: 290 EGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
EGF+ C +C C QC C P TG C+EE CP
Sbjct: 265 EGFHGPNCSQEC--RCHNGGLCDRFTGQCRCAPGYTGDRCREE-CP 307
Score = 59 (25.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 301 CPDKC---PENRTCI--NNQCVCPPRRTGPDCQEEICPN 334
C + C P+ R C N C+C TG C + +CP+
Sbjct: 315 CAETCDCAPDAR-CFPANGACLCEHGFTGDRCTDRLCPD 352
Score = 59 (25.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 300 SCPDKCPENR----TC--INNQCVCPPRRTGPDCQEEICPNECH 337
SC C +R +C +N +C C P G C E CP + H
Sbjct: 358 SCQAPCTCDREHSLSCHPMNGECSCLPGWAGLHCNES-CPQDTH 400
Score = 59 (25.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 16/49 (32%), Positives = 20/49 (40%)
Query: 282 HYKQGKPSEGFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQ 328
H +G P F A S P +C C CVCPP +G C+
Sbjct: 690 HCLEGCPLGTFGANC---SQPCQCGPGEKCHPETGACVCPPGHSGAPCR 735
Score = 55 (24.4 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP GP+C +E C CH N G CD
Sbjct: 263 CPEGFHGPNCSQE-C--RCH---NGGLCD 285
Score = 53 (23.7 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 316 CVCPPRRTGPDCQEEICPNECH 337
C C P TGP C +CP + +
Sbjct: 423 CQCAPGYTGPHCAS-LCPPDTY 443
Score = 52 (23.4 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 304 KCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
+C TC + C+CP TG C E CP
Sbjct: 666 QCHHGGTCHPQDGSCICPLGWTGHHCLEG-CP 696
Score = 45 (20.9 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 13/39 (33%), Positives = 14/39 (35%)
Query: 299 FSCPD--KCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
FSC +C C C C P G CQ CP
Sbjct: 488 FSCNASCQCAHEAVCSPQTGACTCTPGWHGAHCQLP-CP 525
Score = 43 (20.2 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 318 CPPRRTGPDCQEE-IC 332
CP GP CQE +C
Sbjct: 395 CPQDTHGPGCQEHCLC 410
Score = 37 (18.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPN 334
+C T + +CPP G +C C N
Sbjct: 424 QCAPGYTGPHCASLCPPDTYGVNCSARCSCEN 455
>ZFIN|ZDB-GENE-000329-5 [details] [associations]
symbol:notch3 "notch homolog 3" species:7955 "Danio
rerio" [GO:0030154 "cell differentiation" evidence=IEA] [GO:0050793
"regulation of developmental process" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA;IGI] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0050768
"negative regulation of neurogenesis" evidence=IEP] [GO:0035019
"somatic stem cell maintenance" evidence=IEP] [GO:0048259
"regulation of receptor-mediated endocytosis" evidence=IGI]
[GO:0048793 "pronephros development" evidence=IMP] [GO:0001889
"liver development" evidence=IGI;IMP] [GO:0001840 "neural plate
development" evidence=IGI] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=IGI] [GO:0021654 "rhombomere boundary
formation" evidence=IGI] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022331 Pfam:PF00008 Pfam:PF00066 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01986 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 ZFIN:ZDB-GENE-000329-5
GO:GO:0016021 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0001889 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0035019 PROSITE:PS00010 HSSP:P07207 GO:GO:0048259
GO:GO:0050768 GO:GO:0048793 Pfam:PF12661 GO:GO:0001840
SUPFAM:SSF90193 GO:GO:0048936 HOGENOM:HOG000234369
HOVERGEN:HBG052650 KO:K02599 InterPro:IPR024600 Pfam:PF11936
CTD:4854 GO:GO:0021654 EMBL:AF152001 IPI:IPI00498136
RefSeq:NP_571624.2 UniGene:Dr.75827 ProteinModelPortal:Q800E4
SMR:Q800E4 STRING:Q800E4 PRIDE:Q800E4 GeneID:58066 KEGG:dre:58066
InParanoid:Q800E4 NextBio:20892327 ArrayExpress:Q800E4 Bgee:Q800E4
Uniprot:Q800E4
Length = 2468
Score = 178 (67.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 95/346 (27%), Positives = 128/346 (36%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGICDECHDWT 88
N C++G C+ P+ Y C CE GW G +C ++ CL C N TC D+ + +T
Sbjct: 678 NPCLHGTCRDDPNGYRCDCEPGWVGKNCDLDRNDCLPSPCQNAGTCF------DQLNGFT 731
Query: 89 TGDHCQYCRAGSYGNA--TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
C+ CR G GN C C + G V GV S T C+C+ G C
Sbjct: 732 ----CK-CRQGFRGNLCQVNINECASSPCLNQGTCVDGVA-SFT--CLCEPPYSGPTCAE 783
Query: 147 CLPGYYGDP-TDGGTC-----Y--YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE 198
L +P + +C Y YQC + PG QG L + E P +
Sbjct: 784 LLTPCSPNPCANHASCVHTPDYLGYQCNCQ-----PGWQG---HLCNNDINECTSNPCKN 835
Query: 199 ---CLWIIGQ---SLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTH 252
C +G S + T P + DIN C+ N D V S +
Sbjct: 836 RGTCTNTLGGYVCSCRAGYTGP------NCETDIN-DCSPNPCLNGGSCTDGVNSFRCSC 888
Query: 253 QSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQG-----KPS-EGFNATYQIFSCPDK-C 305
G C +++ V K+G Y KP G + C + C
Sbjct: 889 LPGFTGARCATELNECQSV-PCKNGGTCTDYVNSYTCTCKPGFTGLLCETNVPDCTESSC 947
Query: 306 PENRTC---INN-QCVCPPRRTGPDCQEEICPNECHE--FLNHGTC 345
TC IN +C C TG CQ E+ NEC LN G C
Sbjct: 948 FNGGTCTDGINGFKCTCRTGFTGDYCQYEV--NECDSQPCLNGGIC 991
Score = 143 (55.4 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 87/330 (26%), Positives = 123/330 (37%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQ 107
++C C GWTG DCS N + C +G CHD C+ C G G
Sbjct: 274 HTCVCVNGWTGDDCSENIDDCATAVCFNGA----TCHDRVASFFCE-CPVGKTGLLCHLD 328
Query: 108 EGCRKCDCNSHGNSVLGVCDS--ITGE--CICQDNTQGKNC----ERCLPGYYGDPTDG- 158
+ C CN G VCD+ + G C C G C + C G +P +
Sbjct: 329 DACVSNPCNE-G----AVCDTNPLNGRAICTCPAGFVGGACNQDMDECSIG--ANPCEHF 381
Query: 159 GTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTA 213
G C +QC TGP + + E + ++ + CL IG+
Sbjct: 382 GKCVNTEGSFQCQCGRGYTGPRCE---IDINECLSMPCQNDAT--CLDRIGEF---TCIC 433
Query: 214 PADIILLRLQPDINVPCNENAVYIYDGL-PDFVTSVGGTHQSTTLGVFCTEDMHRGYEVL 272
+ DI+ C N + DG+ D V T Q G C D+
Sbjct: 434 MPGYQGKYCEVDID-ECESNPC-VNDGICRDMVNGFTCTCQPGFTGTMCQIDIDECAST- 490
Query: 273 EAKSGVMTIHYKQG---KPSEGFNATY---QIFSC-PDKCPENRTCINN----QCVCPPR 321
++G I G + +EGF I +C PD C + TC++ C C P
Sbjct: 491 PCQNGAKCIDRPNGYECRCAEGFEGRLCESNIDNCKPDPC-HHGTCVDGIASYTCNCEPG 549
Query: 322 RTGPDCQEEICPNECHE--FLNHGTC-DLL 348
TG C+ ++ NECH N G C DL+
Sbjct: 550 YTGYRCENQL--NECHSNPCQNGGKCVDLV 577
Score = 128 (50.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 53/168 (31%), Positives = 68/168 (40%)
Query: 36 NKCIYGYCK-GPPDYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC 93
N C YG CK G Y C C+ G+TG C C ++ C +G G C D G HC
Sbjct: 603 NPCDYGICKDGINRYECVCKPGFTGPQCKDEIDECQSNP-CRNG-GTCV---DDENGFHC 657
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCER----C 147
Q C G + + +C N + G C D G C C+ GKNC+ C
Sbjct: 658 Q-CPEG-FHDPYCYSQVDECASNP---CLHGTCRDDPNGYRCDCEPGWVGKNCDLDRNDC 712
Query: 148 LPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTP 195
LP + GTC+ Q G T QG L + N E +P
Sbjct: 713 LPS---PCQNAGTCFDQL--NGF-TCKCRQGFRGNLCQVNINECASSP 754
Score = 127 (49.8 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 49/155 (31%), Positives = 60/155 (38%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNC-LCN----NHSTCVHGIG--ICDEC 84
C N KCI P Y C+C G+ G C N C +H TCV GI C+ C
Sbjct: 492 CQNGAKCI----DRPNGYECRCAEGFEGRLCESNIDNCKPDPCHHGTCVDGIASYTCN-C 546
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
TG C+ N + C C + G V V I C CQ T G NC
Sbjct: 547 EPGYTGYRCE--------NQLNE--CHSNPCQNGGKCVDLVNKYI---CQCQHGTSGTNC 593
Query: 145 ERCLPGYYGDPTDGGTCY-----YQCMARGMLTGP 174
E +P D G C Y+C+ + TGP
Sbjct: 594 EINFDDCASNPCDYGICKDGINRYECVCKPGFTGP 628
Score = 123 (48.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 41/141 (29%), Positives = 58/141 (41%)
Query: 32 SLCYNK--CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTT 89
S C N C P Y+C C+ G+ G DCS+ C S C +G C +W
Sbjct: 62 SPCLNAAACKSQVANSIPQYTCVCQRGFRGQDCSLVDACAT-SPCANGA----RCTNWNN 116
Query: 90 GDHCQYCRAGSYGNATTQEGCRKC--DCNSHGNSVLG-VCDSITGE--CICQDNTQGKNC 144
+C C G G + CR +C G + G +C + G C C G+ C
Sbjct: 117 HYNCS-CPPGYQG-----KNCRNDIDECRKPGKCLNGGICMNTHGSFRCECLTGYSGRTC 170
Query: 145 ERCLPGYYGDPT---DGGTCY 162
E +P P+ +GGTC+
Sbjct: 171 E--VPTQPCAPSQCLNGGTCH 189
Score = 121 (47.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 36 NKCIY-GYCKGPPD-YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDH 92
N C+ G C+ + ++C C+ G+TG C ++ C + + C +G +C D G
Sbjct: 452 NPCVNDGICRDMVNGFTCTCQPGFTGTMCQIDIDECAS-TPCQNGA----KCIDRPNGYE 506
Query: 93 CQYCRAGSYGNATTQ--EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
C+ C G G + C+ C+ HG V G+ S T C C+ G CE L
Sbjct: 507 CR-CAEGFEGRLCESNIDNCKPDPCH-HGTCVDGIA-SYT--CNCEPGYTGYRCENQLNE 561
Query: 151 YYGDPT-DGGTC 161
+ +P +GG C
Sbjct: 562 CHSNPCQNGGKC 573
Score = 110 (43.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 37/120 (30%), Positives = 51/120 (42%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
Y+C C+ G+TG+ C N S+C +G G C D G C CR G G+ E
Sbjct: 922 YTCTCKPGFTGLLCETNVPDCTESSCFNG-GTCT---DGINGFKCT-CRTGFTGDYCQYE 976
Query: 109 GCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCER----CLPGYYGDPT-DGGTC 161
+CD N G+C D++ C C G C+ C P +P +GG C
Sbjct: 977 -VNECDSQPCLNG--GICQDAMESYRCSCPKGYTGPRCQYPVDWCRPS---NPCKNGGRC 1030
Score = 108 (43.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 48/166 (28%), Positives = 65/166 (39%)
Query: 34 CYNK-CIYGY-CKG-PPDYSCQCELGWTGVDCS--VN-CL---CNNHSTCVHGIG--ICD 82
C K C+ G C+ ++C C G+ G +C VN C C N TC+ +G IC
Sbjct: 1105 CEEKPCLNGATCRSYMGGFTCDCMPGYEGNNCEREVNECQSHPCQNGGTCIDLVGHYICS 1164
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQ 140
C T G C+ + G KC N G C D + G C C
Sbjct: 1165 -CPPGTLGVLCEI-NEDDCATPSWPRGMPKCQNN-------GTCVDRVGGYRCNCPPGFT 1215
Query: 141 GKNCE----RCLPGYYGDPTDGGTCY-----YQCMARGMLTGPGPQ 177
G+ CE CL +P++ C YQC+ + TG G Q
Sbjct: 1216 GERCEGDINECLSNPC-NPSNSLDCIQLPNDYQCVCKPGFTGRGCQ 1260
Score = 103 (41.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 25/65 (38%), Positives = 30/65 (46%)
Query: 291 GFNATYQIFSCPD-KCPENRTCINN----QCVCPPRRTGPDCQEEI--C---PNECHEFL 340
G N + CP KC N C++ C CPP TG C E++ C PN CH
Sbjct: 206 GHNCEDNVDDCPGHKCMNNGICVDGVNTYNCQCPPEWTGQYCAEDVNECLMQPNACH--- 262
Query: 341 NHGTC 345
N GTC
Sbjct: 263 NGGTC 267
Score = 80 (33.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 289 SEGFNATYQIFSCPDKCPENRTC---INN-QCVCPPRRTGPDCQEEICPNECHEFLNHGT 344
+ G N C + C IN +CVC P TGP C++EI + + N GT
Sbjct: 588 TSGTNCEINFDDCASNPCDYGICKDGINRYECVCKPGFTGPQCKDEIDECQSNPCRNGGT 647
Query: 345 C 345
C
Sbjct: 648 C 648
Score = 77 (32.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 304 KCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC 336
KC N TC++ +C CPP TG C+ +I NEC
Sbjct: 1192 KCQNNGTCVDRVGGYRCNCPPGFTGERCEGDI--NEC 1226
Score = 73 (30.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 297 QIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQEEICPNEC--HEFLNHGTC-DLL 348
Q C +K C TC + C C P G +C+ E+ NEC H N GTC DL+
Sbjct: 1101 QFDHCEEKPCLNGATCRSYMGGFTCDCMPGYEGNNCEREV--NECQSHPCQNGGTCIDLV 1158
Score = 70 (29.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 22/73 (30%), Positives = 30/73 (41%)
Query: 288 PSEGFNATYQIFSC-PDKCPENRTCINN------QCVCPPRRTGPDCQEEICPNEC--HE 338
P G + C P+ C + +C++ QC C P G C +I NEC +
Sbjct: 775 PYSGPTCAELLTPCSPNPCANHASCVHTPDYLGYQCNCQPGWQGHLCNNDI--NECTSNP 832
Query: 339 FLNHGTCDLLLTG 351
N GTC L G
Sbjct: 833 CKNRGTCTNTLGG 845
Score = 70 (29.7 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 39/159 (24%), Positives = 62/159 (38%)
Query: 226 INVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHR---GYEVLEAKSGVM--- 279
++ PCNE AV D P ++ T + +G C +DM G E +
Sbjct: 332 VSNPCNEGAVC--DTNPLNGRAIC-TCPAGFVGGACNQDMDECSIGANPCEHFGKCVNTE 388
Query: 280 -TIHYKQGKPSEGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICP 333
+ + G+ G I C C + TC++ C+C P G C+ +I
Sbjct: 389 GSFQCQCGRGYTGPRCEIDINECLSMPCQNDATCLDRIGEFTCICMPGYQGKYCEVDIDE 448
Query: 334 NECHEFLNHGTCDLLLTGVHIT--HGRT-LHYQVDLIRC 369
E + +N G C ++ G T G T Q+D+ C
Sbjct: 449 CESNPCVNDGICRDMVNGFTCTCQPGFTGTMCQIDIDEC 487
Score = 69 (29.3 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 302 PDKCPENRTCINN-----QCVCPPRRTGPDCQEEI--CPNECHEFLNHGTC 345
P +C TC +C C P G +C++ + CP H+ +N+G C
Sbjct: 179 PSQCLNGGTCHQTGDHTYECACLPGFRGHNCEDNVDDCPG--HKCMNNGIC 227
Score = 68 (29.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 302 PDKCPENRTCIN----NQCVCPPRRTGPDCQEEICPNECHEFL--NHGTC 345
P+ C TC N + CVC TG DC E I ++C + N TC
Sbjct: 258 PNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENI--DDCATAVCFNGATC 305
Score = 66 (28.3 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 14/33 (42%), Positives = 14/33 (42%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDL 347
QCVC P TG CQ E N G C L
Sbjct: 1247 QCVCKPGFTGRGCQSRFSVCESQPCKNGGVCSL 1279
Score = 64 (27.6 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 21/68 (30%), Positives = 28/68 (41%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQ--EEIC-----PNECH 337
EG N ++ C C TCI+ C CPP G C+ E+ C P
Sbjct: 1132 EGNNCEREVNECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCATPSWPRGMP 1191
Query: 338 EFLNHGTC 345
+ N+GTC
Sbjct: 1192 KCQNNGTC 1199
Score = 60 (26.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/89 (29%), Positives = 36/89 (40%)
Query: 291 GFNATYQIFSCPD-KCPENRTC---INNQ-CVCPPRRTGPDCQEEICPNECHEF--LNHG 343
G ++ C C TC +N+ C C P TG C+ + P +C E N G
Sbjct: 894 GARCATELNECQSVPCKNGGTCTDYVNSYTCTCKPGFTGLLCETNV-P-DCTESSCFNGG 951
Query: 344 TCDLLLTGVHIT--HGRTLHY-QVDLIRC 369
TC + G T G T Y Q ++ C
Sbjct: 952 TCTDGINGFKCTCRTGFTGDYCQYEVNEC 980
Score = 57 (25.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 305 CPENRTCIN----NQCVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
C C+N + C CP TG C+ + + C E LN TC + G
Sbjct: 1072 CLHGGHCVNTGNTHYCKCPADYTGSYCESQF--DHCEEKPCLNGATCRSYMGG 1122
Score = 41 (19.5 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 321 RRTGPDCQEEICPNECHEFLNHGTC 345
R P C ++C EF N+ C
Sbjct: 1431 RCADPRCWRLFNNSQCDEFCNNAEC 1455
>ZFIN|ZDB-GENE-060119-1 [details] [associations]
symbol:lama2 "laminin, alpha 2" species:7955 "Danio
rerio" [GO:0030155 "regulation of cell adhesion" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0060538 "skeletal muscle organ
development" evidence=IMP] [GO:0016203 "muscle attachment"
evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-060119-1 GO:GO:0030155
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:JN786913 Uniprot:G8IHT9
Length = 3124
Score = 185 (70.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 51/146 (34%), Positives = 65/146 (44%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSVNCLC------NNHS-TC-VHGIG--ICDECHDWTTG 90
G C P Y G T DC C C NN S TC V G G ICD C TG
Sbjct: 771 GQCA--PGYYGDATRG-TADDCQP-CACPLLSPANNFSPTCRVDGRGEVICDRCPPGYTG 826
Query: 91 DHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGV-CDSITGECI-CQDNTQGKNCERC 147
C C G +G G C+ C C+ + + + CD +TG C+ C+ G +CERC
Sbjct: 827 SRCDRCSNGYFGRPNIPGGSCQPCVCSGNLDQTAPLSCDPLTGACLRCRKGYGGADCERC 886
Query: 148 LPGYYGDPTDGGTCYY-QCMARGMLT 172
GY+GD C QC + G ++
Sbjct: 887 ADGYFGDALIAKNCQACQCHSNGSVS 912
Score = 185 (70.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 66/212 (31%), Positives = 92/212 (43%)
Query: 4 IFRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQ-CELGWTGVDC 62
I+R+ + T+ D SR + + +C +C GY G SC+ C LG+ V+
Sbjct: 682 IYRLGSVRTSVADEDSRSGIQAGAV---EVC--QCPPGY-DGT---SCEMCALGYRRVNG 732
Query: 63 SVN------CLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKC 113
++ C C+ H+ C G C C D T G +C C G YG+AT T + C+ C
Sbjct: 733 TIYQGVCELCQCHGHTERCDDLTGHCLGCRDHTVGPNCGQCAPGYYGDATRGTADDCQPC 792
Query: 114 DCN--SHGNSVLGVC--DSITGECICQ---DNTQGKNCERCLPGYYGDPT-DGGTCYYQC 165
C S N+ C D GE IC G C+RC GY+G P GG+C C
Sbjct: 793 ACPLLSPANNFSPTCRVDG-RGEVICDRCPPGYTGSRCDRCSNGYFGRPNIPGGSCQ-PC 850
Query: 166 MARGMLTGPGPQGL----GSGLAERNAWEGKD 193
+ G L P G+ L R + G D
Sbjct: 851 VCSGNLDQTAPLSCDPLTGACLRCRKGYGGAD 882
Score = 184 (69.8 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 42/113 (37%), Positives = 54/113 (47%)
Query: 59 GVDCSVNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT-QEGCRKCDCN 116
G V C CN HS +C IC C T GD C+ C AG YG + C+ C C
Sbjct: 1390 GFGSCVRCQCNGHSDSCDPETSICQNCQHNTVGDKCERCAAGFYGVVRGFTDDCKPCACP 1449
Query: 117 --SHGNSVLGVCDSITG----ECI-CQDNTQGKNCERCLPGYYGDP-TDGGTC 161
+ N+ C + G C C + +GK+CERC PG++GDP GG C
Sbjct: 1450 LLNPENNFSPTCQT-EGFNEYRCTACPEGYEGKHCERCAPGFHGDPGVLGGRC 1501
Score = 170 (64.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 46/137 (33%), Positives = 59/137 (43%)
Query: 51 CQCELGWTGVDCSVNCLCNNHST----CV----HGIGI----CDE-----CHDWTTGDHC 93
CQC G C C+ +H CV + G CDE C TG C
Sbjct: 922 CQCRQHVIGRQCD-ECMAGSHLQGALGCVPCHCNSFGSKSFDCDESGQCRCQPGVTGQKC 980
Query: 94 QYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C AG + + QEG C C C GN+ CD+ TG+CIC NT G+ C++C P ++
Sbjct: 981 DRCAAGHF---SFQEGGCTPCQCAHVGNN----CDASTGQCICPPNTVGERCDKCAPNHW 1033
Query: 153 GDPTDGGTCYYQCMARG 169
G G C A G
Sbjct: 1034 GHDISTGCKPCGCNALG 1050
Score = 164 (62.8 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 40/125 (32%), Positives = 58/125 (46%)
Query: 29 FNASLCYNKCIYGYCKGP--PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECH 85
+ S C ++C GY P P SCQ C CS N +C G C C
Sbjct: 824 YTGSRC-DRCSNGYFGRPNIPGGSCQPCV-------CSGNLDQTAPLSCDPLTGACLRCR 875
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C+ C G +G+A + C+ C C+S+G SV +C TG+C C+ + G+ C+
Sbjct: 876 KGYGGADCERCADGYFGDALIAKNCQACQCHSNG-SVSELCHQETGQCQCRQHVIGRQCD 934
Query: 146 RCLPG 150
C+ G
Sbjct: 935 ECMAG 939
Score = 148 (57.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 40/133 (30%), Positives = 58/133 (43%)
Query: 51 CQ-CELGWTGV------DCSVNCLC------NNHS-TC-VHGIGI--CDECHDWTTGDHC 93
C+ C G+ GV DC C C NN S TC G C C + G HC
Sbjct: 1425 CERCAAGFYGVVRGFTDDCKP-CACPLLNPENNFSPTCQTEGFNEYRCTACPEGYEGKHC 1483
Query: 94 QYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+ C G +G+ G C +C C+ +G + CDS +G+C C+ G C++C+ +
Sbjct: 1484 ERCAPGFHGDPGVLGGRCEECKCDPYG-AFPSACDSHSGQCQCRPGASGLKCDQCMERHV 1542
Query: 153 GDPTDGGTCYYQC 165
P +C C
Sbjct: 1543 CGPEGIVSCDDDC 1555
Score = 138 (53.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 35/92 (38%), Positives = 42/92 (45%)
Query: 72 STCVHGIGICDECHDWTTGDHCQYCRAGSY------GNATTQEG---CRKCDCNSHGNSV 122
S H I C C G C+ C AG Y G + ++ G C +C CN H +S
Sbjct: 1348 SEIAHQIEKC-VCPQGYAGLSCEECAAGFYRLSVLAGGSASRAGFGSCVRCQCNGHSDS- 1405
Query: 123 LGVCDSITGECI-CQDNTQGKNCERCLPGYYG 153
CD T C CQ NT G CERC G+YG
Sbjct: 1406 ---CDPETSICQNCQHNTVGDKCERCAAGFYG 1434
Score = 134 (52.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 45/146 (30%), Positives = 60/146 (41%)
Query: 41 GYCKGPPDY---SC-QCELGWTGVDCSVNCL---CNNHST----CVHGIGICDECHDWTT 89
G C PP+ C +C G D S C CN + C G C C +
Sbjct: 1012 GQCICPPNTVGERCDKCAPNHWGHDISTGCKPCGCNALGSVAQQCNLNTGCC-MCREQFR 1070
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD---------NTQ 140
G+ C C+ G Y + C C C++ G+S L CDS +G C C D N +
Sbjct: 1071 GEKCDECKLG-YRDFPQ---CISCQCSAAGSS-LDTCDSESGLCACADRSGQCSCKANVE 1125
Query: 141 GKNCERCLPGYYG----DPTDGGTCY 162
G+ CERC G +G +P CY
Sbjct: 1126 GQKCERCKSGSFGLSHRNPLGCSRCY 1151
Score = 122 (48.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 44/151 (29%), Positives = 60/151 (39%)
Query: 38 CI-YGYCKGPP------DYSCQCELGWTGVDCSVNCLCNNHSTCVHGI----GICDECHD 86
CI YG+ K P +SC+CE G C C N + G +C++C+
Sbjct: 272 CICYGHAKACPLNTHTKKFSCECEHNTCGESCDRCCPAYNQKPWMAGTFLTRHVCEKCNC 331
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCE 145
+ C Y N T + K N HG G G C+ C +NT G NC+
Sbjct: 332 HNKSEECYY-------NQTVADA--KLSLNIHGEYEGG------GVCLGCSENTGGINCQ 376
Query: 146 RCLPGYY---G-DPTDGGTCY-YQCMARGML 171
C+ G+Y G P + C C RG L
Sbjct: 377 SCIDGFYRPSGVSPLEPWPCTPCTCDLRGAL 407
Score = 119 (46.9 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 34/124 (27%), Positives = 54/124 (43%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHG---------IGICDECHDWT 88
CI G+ + P E W C+ + HSTCV +G C C
Sbjct: 378 CIDGFYR--PSGVSPLE-PWPCTPCTCDLRGALHSTCVPDESQATTDLPVGSCI-CKPGY 433
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL 148
G+ C C +G A + C +C C+S G+ C C+C+++ +G++C+RC
Sbjct: 434 AGERCDRC---VFGYAGFPQ-CERCRCSSDGSVNQDPCQP---PCVCKEHVEGRDCDRCK 486
Query: 149 PGYY 152
G+Y
Sbjct: 487 QGFY 490
Score = 116 (45.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 35/117 (29%), Positives = 49/117 (41%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSY--GNATTQEG 109
+C T D ++ N H G G+C C + T G +CQ C G Y + E
Sbjct: 337 ECYYNQTVADAKLSL--NIHGE-YEGGGVCLGCSENTGGINCQSCIDGFYRPSGVSPLEP 393
Query: 110 --CRKCDCNSHGNSVLGVC---------DSITGECICQDNTQGKNCERCLPGYYGDP 155
C C C+ G ++ C D G CIC+ G+ C+RC+ GY G P
Sbjct: 394 WPCTPCTCDLRG-ALHSTCVPDESQATTDLPVGSCICKPGYAGERCDRCVFGYAGFP 449
Score = 60 (26.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 295 TYQIFSC-PDKCPE-NRTC--INNQCVCPPRRTGPDCQEEICPN 334
++Q C P +C C QC+CPP G C ++ PN
Sbjct: 989 SFQEGGCTPCQCAHVGNNCDASTGQCICPPNTVGERC-DKCAPN 1031
Score = 44 (20.5 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 315 QCVCPPRRTGPDCQE 329
+CVCP G C+E
Sbjct: 1356 KCVCPQGYAGLSCEE 1370
Score = 41 (19.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 316 CVCPPRRTGPD-CQEEICPNECHEFLNHGTCDLLLTGVHI 354
C C + + C +E +C + + CD + G H+
Sbjct: 903 CQCHSNGSVSELCHQETGQCQCRQHVIGRQCDECMAGSHL 942
Score = 40 (19.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 313 NNQCVCPPRRTGPDC 327
+ QC C P TG C
Sbjct: 966 SGQCRCQPGVTGQKC 980
Score = 38 (18.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 313 NNQCVCPPRRTGPDCQE 329
+ QC C P +G C +
Sbjct: 1520 SGQCQCRPGASGLKCDQ 1536
>ZFIN|ZDB-GENE-990415-183 [details] [associations]
symbol:notch1b "notch homolog 1b" species:7955
"Danio rerio" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050793 "regulation of developmental process" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0001946
"lymphangiogenesis" evidence=IMP] [GO:0048936 "peripheral nervous
system neuron axonogenesis" evidence=IGI] [GO:0021654 "rhombomere
boundary formation" evidence=IGI] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152
ZFIN:ZDB-GENE-990415-183 GO:GO:0016021 GO:GO:0006355
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001946 PROSITE:PS01186
PROSITE:PS00010 GO:GO:0001568 GO:GO:0050793 Pfam:PF12661
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 GO:GO:0048936
InterPro:IPR024600 Pfam:PF11936 GO:GO:0021654 EMBL:BX119981
EMBL:CR396583 IPI:IPI00615364 Ensembl:ENSDART00000050855
ArrayExpress:F1QCA7 Bgee:F1QCA7 Uniprot:F1QCA7
Length = 2465
Score = 157 (60.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 39/113 (34%), Positives = 57/113 (50%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
N CI+G+C+ + Y+C C+ GW+GV+C +N + C++G G C D T+G C
Sbjct: 743 NPCIHGHCEDKVNGYNCICDSGWSGVNCDINNNECESNPCMNG-GTCK---DMTSGYVCT 798
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCE 145
CRAG + Q +C N N G C D + G +C C G+ CE
Sbjct: 799 -CRAG-FSGPNCQTNINECASNPCLNQ--GTCIDDVAGYKCNCLLPYTGQTCE 847
Score = 152 (58.6 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 98/401 (24%), Positives = 144/401 (35%)
Query: 12 TAKDDALS-RCTVLLLYIFNA-SLCYNKCIYGYCKGPP-------DYSCQCELGWTGVDC 62
T DD +C LL Y + N+C+ C+ Y C C+ G+TG +C
Sbjct: 825 TCIDDVAGYKCNCLLPYTGQTCEVDINECVKNPCRNDAICQNSIGSYKCSCKAGYTGRNC 884
Query: 63 SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN--SHGN 120
+ + C +G G C D C C G G +E +C+ N +G
Sbjct: 885 ETDIDDCKPNPCSNG-GFCK---DAVNAFACT-CLPGFRGGRC-EEDINECESNPCKNGA 938
Query: 121 SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT-DGGTCYYQCMARGMLTGPGPQGL 179
+ +S T C C G +CE P +GGTC + L P+G
Sbjct: 939 NCTDCVNSYT--CTCPPGFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLC---PKGF 993
Query: 180 GSGLAERNAWEGKDTPSRECLWIIGQSLDS----NSTAPADIILLRLQPDIN----VPCN 231
+ + + SR C+ G DS T P L Q +N PC
Sbjct: 994 TGNYCQHDI---NECDSRPCM-NGGTCQDSYGTYKCTCPQGYHGLNCQELVNWCKPSPCK 1049
Query: 232 ENAVYIYDGLP-DFVTSVGGTHQSTTL-GVFC-TEDMHRGYEVLEA--KSGVM----TIH 282
+ G G T + V C +G +V+ SG H
Sbjct: 1050 NGGICRQSGTRYSCQCQTGWTGLYCDVPSVSCEVAAKQQGVDVVRLCRNSGQCLDAGNTH 1109
Query: 283 YKQGKPSEGFNATY---QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPN 334
Y + G+ +Y Q+ C P+ C TC + C C P G +C +EI N
Sbjct: 1110 YCHCQA--GYTGSYCEEQVDECIPNPCQNGATCTDYLGGYSCECVPGYHGVNCSDEI--N 1165
Query: 335 EC--HEFLNHGTC-DLLLT-GVHITHG-RTLHYQVDLIRCT 370
EC N GTC DL+ T G + +H ++++ CT
Sbjct: 1166 ECLSQPCQNGGTCIDLINTYKCSCPRGTQGVHCEINIDDCT 1206
Score = 136 (52.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 79/322 (24%), Positives = 118/322 (36%)
Query: 48 DYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGI--CDECHDWTTGDHCQYCRAG 99
+Y C+C G++G C + C C N + C+ G + C +C + TG HC+
Sbjct: 531 NYQCECPTGFSGSQCQFDIDECASTPCKNGAKCMDGPNMYTC-QCTEGYTGQHCE----- 584
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT-DG 158
T + C C+ +G G+ S T C+C+ G+ CE + P +G
Sbjct: 585 -----TDVDECLSNPCH-YGTCKDGLA-SFT--CVCRAGFMGRLCEININECLSQPCQNG 635
Query: 159 GTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSR--ECL-WIIGQSLDSNSTAPA 215
GTC Q L P+G E N + + P C+ I G
Sbjct: 636 GTC--QDRENAYLC-VCPKGTAGANCEINLDDCQSNPCDFGRCIDKINGYECACEPGYTG 692
Query: 216 DIILLRLQPDINVPCNENAVYIYDGLPDFVTSVG-GTHQSTTLGVF--CTED--MHRGYE 270
+ + + PC+ + DG+ F G H +T C + +H E
Sbjct: 693 KMCNINIDECAINPCHNGGTCV-DGVNGFTCLCREGYHDTTCQSQLNECLSNPCIHGHCE 751
Query: 271 VLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGP 325
+ +G I G G N C C TC + C C +GP
Sbjct: 752 --DKVNGYNCI-CDSGW--SGVNCDINNNECESNPCMNGGTCKDMTSGYVCTCRAGFSGP 806
Query: 326 DCQEEICPNEC--HEFLNHGTC 345
+CQ I NEC + LN GTC
Sbjct: 807 NCQTNI--NECASNPCLNQGTC 826
Score = 130 (50.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 47/152 (30%), Positives = 57/152 (37%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWT 88
C N KC+ GP Y+CQC G+TG C + CL N C +G C D
Sbjct: 557 CKNGAKCM----DGPNMYTCQCTEGYTGQHCETDVDECLSN---PCHYGT-----CKDGL 604
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCER 146
C CRAG G + +C N G C C+C T G NCE
Sbjct: 605 ASFTC-VCRAGFMGRLC-EININECLSQPCQNG--GTCQDRENAYLCVCPKGTAGANCEI 660
Query: 147 CLPGYYGDPTDGGTCY-----YQCMARGMLTG 173
L +P D G C Y+C TG
Sbjct: 661 NLDDCQSNPCDFGRCIDKINGYECACEPGYTG 692
Score = 112 (44.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 41/129 (31%), Positives = 58/129 (44%)
Query: 36 NKCIYG-YC-KGPPDYSCQCELGWTGVDCS--VN-C-----LCNNHSTCVHGIG--ICDE 83
++C+ G C G Y+CQC+ WTG C+ VN C C N TC++ G C
Sbjct: 284 HRCLNGGTCVDGVNTYNCQCKPEWTGQFCTEDVNECDLMPNSCQNGGTCLNTQGGYNCVC 343
Query: 84 CHDWTTGDHCQY----CR-AGSYGNATTQEGCRK--CDCNSHGNSVLGVCDSITGECICQ 136
+ WT GD C C A + AT + C+C HG + L +C + CI
Sbjct: 344 VNGWT-GDDCSENIDDCADAACHTGATCHDRVASFLCEC-PHGRTGL-LCH-LDDACISN 399
Query: 137 DNTQGKNCE 145
+G NC+
Sbjct: 400 PCQKGSNCD 408
Score = 106 (42.4 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 37/135 (27%), Positives = 54/135 (40%)
Query: 34 CYNKCIYGYC-KGPPDYSCQCELGWTGVDCS--VN-CLCNNHSTCVHGIGICDECHDWTT 89
C+N G C G ++C C G+ C +N CL N C+HG C D
Sbjct: 707 CHNG---GTCVDGVNGFTCLCREGYHDTTCQSQLNECLSN---PCIHG-----HCEDKVN 755
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERC 147
G +C C +G + +C+ N N G C +T C C+ G NC+
Sbjct: 756 GYNC-ICDSG-WSGVNCDINNNECESNPCMNG--GTCKDMTSGYVCTCRAGFSGPNCQTN 811
Query: 148 LPGYYGDPT-DGGTC 161
+ +P + GTC
Sbjct: 812 INECASNPCLNQGTC 826
Score = 95 (38.5 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 31/117 (26%), Positives = 48/117 (41%)
Query: 48 DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+Y C+C GW+G C C ++ C +G G +C + + C +C + T +
Sbjct: 121 NYRCKCPPGWSGKTCQQADPCASNP-CANG-G---QCSPFDSDFLC-HCTP-YFSGQTCK 173
Query: 108 EGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT-DGGTC 161
+ +C GVC++ G C C GK+CE P GGTC
Sbjct: 174 QDVNECAQIPSPCKNGGVCENGVGTYHCNCPAEYTGKHCESLYQPCNPSPCLHGGTC 230
Score = 95 (38.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/149 (28%), Positives = 57/149 (38%)
Query: 32 SLCYNKCIY-GYC---KGPPDYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGIC 81
SL N C + G C KG + C+C G+ G C ++ CL C N +TC+ IG
Sbjct: 437 SLGANPCEHAGKCINTKG--SFQCKCLQGYVGARCELDINECLSTPCQNDATCLDQIG-- 492
Query: 82 DECHDWTTGDHCQYCRAGSYG---NATTQEGCRKCDCNSHGNSVLGVCDSITG-ECICQD 137
G HC C G G T E C C ++G + D I +C C
Sbjct: 493 --------GFHC-ICMPGYEGVFCQINTDE-CASMPCLNNGKCI----DKINNYQCECPT 538
Query: 138 NTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
G C+ + P G +CM
Sbjct: 539 GFSGSQCQFDIDECASTPCKNGA---KCM 564
Score = 93 (37.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 33/101 (32%), Positives = 40/101 (39%)
Query: 49 YSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIG--ICDECHDWTTG------DHC- 93
Y+C C GWTG DCS N C C+ +TC + +C EC TG D C
Sbjct: 339 YNCVCVNGWTGDDCSENIDDCADAACHTGATCHDRVASFLC-ECPHGRTGLLCHLDDACI 397
Query: 94 -QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGEC 133
C+ GS + G C C V CD EC
Sbjct: 398 SNPCQKGSNCDTNPVNGKAICTCPL--GYVGPACDQDVDEC 436
Score = 92 (37.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 44/175 (25%), Positives = 65/175 (37%)
Query: 20 RCTVLLLYI-FNASLCYNKCIYGYCKGPPD-------YSCQCELGWTGVDCSVN---CL- 67
+C L Y+ L N+C+ C+ + C C G+ GV C +N C
Sbjct: 457 QCKCLQGYVGARCELDINECLSTPCQNDATCLDQIGGFHCICMPGYEGVFCQINTDECAS 516
Query: 68 --CNNHSTCVHGIGICD-ECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG 124
C N+ C+ I EC +G CQ+ E C C + + G
Sbjct: 517 MPCLNNGKCIDKINNYQCECPTGFSGSQCQF---------DIDE-CASTPCKNGAKCMDG 566
Query: 125 VCDSITGECICQDNTQGKNCE----RCL--PGYYGDPTDGGTCYYQCMARGMLTG 173
+ T C C + G++CE CL P +YG DG + C+ R G
Sbjct: 567 P-NMYT--CQCTEGYTGQHCETDVDECLSNPCHYGTCKDG-LASFTCVCRAGFMG 617
Score = 91 (37.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 24/65 (36%), Positives = 29/65 (44%)
Query: 291 GFNATYQIFSCPD-KCPENRTCINN----QCVCPPRRTGPDCQEEI--C---PNECHEFL 340
G N I CPD +C TC++ C C P TG C E++ C PN C
Sbjct: 271 GQNCEENIDDCPDHRCLNGGTCVDGVNTYNCQCKPEWTGQFCTEDVNECDLMPNSCQ--- 327
Query: 341 NHGTC 345
N GTC
Sbjct: 328 NGGTC 332
Score = 91 (37.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 33/95 (34%), Positives = 43/95 (45%)
Query: 277 GVMTIHYKQGKPS-EGFNATYQIFSC---PDKCPENRTCINNQ----CVCPPRRTGPDCQ 328
GV T + Q KP G T + C P+ C TC+N Q CVC TG DC
Sbjct: 295 GVNTYNC-QCKPEWTGQFCTEDVNECDLMPNSCQNGGTCLNTQGGYNCVCVNGWTGDDCS 353
Query: 329 EEICPNECHEFLNH--GTC-DLLLTGV-HITHGRT 359
E I ++C + H TC D + + + HGRT
Sbjct: 354 ENI--DDCADAACHTGATCHDRVASFLCECPHGRT 386
Score = 90 (36.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 41/135 (30%), Positives = 55/135 (40%)
Query: 41 GYCK-GPPDYSCQCELGWTGVDC-SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRA 98
G C+ G Y C C +TG C S+ CN S C+HG G C + + T C C
Sbjct: 190 GVCENGVGTYHCNCPAEYTGKHCESLYQPCNP-SPCLHG-GTCVQKGE--TSYECS-CLP 244
Query: 99 GSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDG 158
G RKC N + ++ V +G+ C++N RCL G G DG
Sbjct: 245 GRQEFVLIM---RKC-LNDY--FLMLVFIGFSGQN-CEENIDDCPDHRCLNG--GTCVDG 295
Query: 159 GTCYYQCMARGMLTG 173
Y C + TG
Sbjct: 296 VNTY-NCQCKPEWTG 309
Score = 88 (36.0 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 291 GFNATYQIFSCPD-KCPENRTCINN----QCVCPPRRTGPDCQEEI---CP-NECHEFLN 341
G Y +C +C TC++ +C+C P TGP+CQ+ C N C+ N
Sbjct: 1319 GSTCEYDAHACGSLQCKNGGTCVSGHKSPKCLCTPAFTGPECQDPSGGHCTTNPCY---N 1375
Query: 342 HGTCDLL 348
GTC+ +
Sbjct: 1376 GGTCEYI 1382
Score = 68 (29.0 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 29/95 (30%), Positives = 40/95 (42%)
Query: 291 GFNATYQIFSCPD----KCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHE--FL 340
GF+ + + PD C TC++ C+CP TG CQ +I NEC +
Sbjct: 954 GFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPKGFTGNYCQHDI--NECDSRPCM 1011
Query: 341 NHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVY 375
N GTC ++G Y +CTC Q Y
Sbjct: 1012 NGGTCQ-------DSYGT---Y-----KCTCPQGY 1031
Score = 62 (26.9 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 305 CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEF--LNHGTC 345
C + TC++ C+C P G CQ I +EC LN+G C
Sbjct: 481 CQNDATCLDQIGGFHCICMPGYEGVFCQ--INTDECASMPCLNNGKC 525
Score = 55 (24.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 316 CVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
C+C +G +C +I NEC +N GTC + +G
Sbjct: 759 CICDSGWSGVNC--DINNNECESNPCMNGGTCKDMTSG 794
>UNIPROTKB|E2R4J1 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072274 "metanephric glomerular basement
membrane development" evidence=IEA] [GO:0072249 "metanephric
glomerular visceral epithelial cell development" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
[GO:0048677 "axon extension involved in regeneration" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0014044 "Schwann cell
development" evidence=IEA] [GO:0014002 "astrocyte development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005608 "laminin-3
complex" evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:AAEX03012231 ProteinModelPortal:E2R4J1
Ensembl:ENSCAFT00000018765 Uniprot:E2R4J1
Length = 1803
Score = 179 (68.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 44/136 (32%), Positives = 59/136 (43%)
Query: 52 QCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG- 109
+C+ G G C+CN H+ C G C C D T G+HC+ C AG +G+ G
Sbjct: 866 RCQRGQWGFPSCQPCVCNGHADECDTHTGACVGCRDHTGGEHCERCIAGFHGDPRLPYGG 925
Query: 110 -CRKCDCNSHGNS---VLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGDPT-DGGT 160
CR C C S C D + + C C+ G CE C PG++GDP+ G
Sbjct: 926 QCRPCPCPEGPGSQRHFATSCHRDGYSQQIMCHCRAGYTGLRCEACAPGHFGDPSRPDGQ 985
Query: 161 CYYQCMARGMLTGPGP 176
C C G + P
Sbjct: 986 CQ-PCECNGNIDPMDP 1000
Score = 174 (66.3 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 68 CNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLG 124
C+ H G+ G C C + G CQ CR G +G +A+ GCR+C C++ G +V G
Sbjct: 426 CDPHDDPALGLVSGQC-RCKEHVVGSRCQQCRDGFFGLSASDPAGCRRCQCDARG-TVPG 483
Query: 125 V--CDSITGECICQDNTQGKNCERCLPGYYG 153
CD +G C C+ G+ C CLPG++G
Sbjct: 484 TTSCDPNSGTCFCKRLVTGRGCNHCLPGHWG 514
Score = 174 (66.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 45/134 (33%), Positives = 57/134 (42%)
Query: 38 CIYGYCKGP--PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
C G+ P PD CQ CE C+ N + C G C C T G HC
Sbjct: 971 CAPGHFGDPSRPDGQCQPCE-------CNGNIDPMDPDACDPRTGQCLRCLYHTEGPHCA 1023
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGV-------CDSITGECICQDNTQGKNCERC 147
+C+ G YG A Q C +C CN G CD +G+C C N QG C+RC
Sbjct: 1024 HCKPGFYGQAARQS-CHRCTCNLLGTDPQQCPSIDRCNCDPSSGQCPCLPNVQGPTCDRC 1082
Query: 148 LPGYYGDPTDGGTC 161
P ++ + T G C
Sbjct: 1083 APNFW-NLTSGHGC 1095
Score = 173 (66.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 43/140 (30%), Positives = 65/140 (46%)
Query: 49 YSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
++C+ CE C + S V G G+CD C T G HC+ CR Y + +
Sbjct: 345 HACRKCECHGHAHSCHFDMAIYLASGNVSG-GVCDGCQHNTAGRHCELCRPFFYRDPSKD 403
Query: 108 ----EGCRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYYG-D 154
CR CDC+ G+ G CD ++G+C C+++ G C++C G++G
Sbjct: 404 LRDPAMCRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLS 463
Query: 155 PTDGGTCYY-QCMARGMLTG 173
+D C QC ARG + G
Sbjct: 464 ASDPAGCRRCQCDARGTVPG 483
Score = 169 (64.5 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 45/129 (34%), Positives = 60/129 (46%)
Query: 56 GWTGVDCSVNCLCNNHST----CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCR 111
G TG C C C+ C G C C G C C+ G +G + C+
Sbjct: 827 GPTG--CQA-CQCSPEGALSGLCEETSGQCP-CRTGAFGLRCDRCQRGQWGFPS----CQ 878
Query: 112 KCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPT--DGGTCYYQCMAR 168
C CN H + CD+ TG C+ C+D+T G++CERC+ G++GDP GG C C
Sbjct: 879 PCVCNGHADE----CDTHTGACVGCRDHTGGEHCERCIAGFHGDPRLPYGGQCR-PCPCP 933
Query: 169 GMLTGPGPQ 177
GPG Q
Sbjct: 934 ---EGPGSQ 939
Score = 157 (60.3 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 37/112 (33%), Positives = 52/112 (46%)
Query: 52 QCELGWTGVDCSV-----NCLCNNHSTCVHGIGICDE------CHDWTTGDHCQYCRAGS 100
QC G+ G+ S C C+ T V G CD C TG C +C G
Sbjct: 454 QCRDGFFGLSASDPAGCRRCQCDARGT-VPGTTSCDPNSGTCFCKRLVTGRGCNHCLPGH 512
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G + GCR CDC+ G ++ C TG+C C+ + G+ CE+ PGY+
Sbjct: 513 WGLSHDLLGCRPCDCDV-GGALDPQCSEATGQCRCRQHMVGRRCEQVQPGYF 563
Score = 140 (54.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 35/117 (29%), Positives = 48/117 (41%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAG 99
YG + C C L G D C + C G C C G C C A
Sbjct: 1030 YGQAARQSCHRCTCNL--LGTDPQ-QCPSIDRCNCDPSSGQCP-CLPNVQGPTCDRC-AP 1084
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGYYGDP 155
++ N T+ GC+ C C H + G C+ TG+C C+ G+ C C ++GDP
Sbjct: 1085 NFWNLTSGHGCQPCTC--HPSRARGPTCNEFTGQCHCRAGFGGRTCSECQELHWGDP 1139
Score = 126 (49.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGTCYYQCMA 167
G C C+ G S+ C+ G+C+C+ G+ C+ C PG+YG PT C QC
Sbjct: 782 GALPCQCDPQG-SLSSECNPHGGQCVCKPAVVGRRCDHCAPGFYGFGPTGCQAC--QCSP 838
Query: 168 RGMLTG 173
G L+G
Sbjct: 839 EGALSG 844
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 31/100 (31%), Positives = 41/100 (41%)
Query: 58 TGVDCSVNCLCN----NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC 113
+G C C C+ TC G C C G C C+ +G+ Q CR C
Sbjct: 1091 SGHGCQP-CTCHPSRARGPTCNEFTGQC-HCRAGFGGRTCSECQELHWGDPGLQ--CRAC 1146
Query: 114 DCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
DC+ HG C TG C C+ G C++C G+ G
Sbjct: 1147 DCDPHGIDT-PQCHRSTGHCSCRPGVSGVRCDQCARGFSG 1185
Score = 124 (48.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 32/99 (32%), Positives = 51/99 (51%)
Query: 66 CLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS---- 121
C+C H+T G+ C++C D+ H R G++ CRKC+C+ H +S
Sbjct: 313 CVCK-HNT--RGLN-CEQCQDFY---HDLPWRPAEDGHS---HACRKCECHGHAHSCHFD 362
Query: 122 --VLGVCDSITGE-CI-CQDNTQGKNCERCLPGYYGDPT 156
+ +++G C CQ NT G++CE C P +Y DP+
Sbjct: 363 MAIYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPS 401
Score = 61 (26.5 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 302 PDKCPENRTC----INNQCVCPPRRTGPDCQEEICPNECHEFLNHG 343
P +CP C + QC C P GP C + PN + HG
Sbjct: 1050 PQQCPSIDRCNCDPSSGQCPCLPNVQGPTC-DRCAPNFWNLTSGHG 1094
Score = 49 (22.3 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 316 CVCPPRRT-GPDCQEEICPNECH 337
C C P R GP C E +CH
Sbjct: 1098 CTCHPSRARGPTCNE--FTGQCH 1118
Score = 40 (19.1 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 315 QCVCPPRRTGPDC 327
QCVC P G C
Sbjct: 804 QCVCKPAVVGRRC 816
Score = 37 (18.1 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 326 DCQEE-ICPNECHEFLNHGTCDLLLTGV 352
DC I +CH H +C ++GV
Sbjct: 1147 DCDPHGIDTPQCHRSTGHCSCRPGVSGV 1174
>UNIPROTKB|H0YAQ5 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 Pfam:PF06008 GO:GO:0030155
GO:GO:0030334 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0045995 GO:GO:0005606
EMBL:Z99289 EMBL:AL590106 HGNC:HGNC:6484 ChiTaRS:LAMA4
Ensembl:ENST00000521732 Uniprot:H0YAQ5
Length = 187
Score = 162 (62.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 40/101 (39%), Positives = 49/101 (48%)
Query: 110 CRKCDC--NSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
C+KCDC NS N + CD +TG+C C NT G CERC PGYYGD C C
Sbjct: 4 CKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARIAKNCAV-CN 62
Query: 167 ARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSL 207
G GP G L E +E T +C+W + +L
Sbjct: 63 CGG---GPCDSVTGECLEE--GFE-PPTGCDKCVWDLTDAL 97
Score = 137 (53.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 31/89 (34%), Positives = 41/89 (46%)
Query: 61 DCSVNCLCNN-HSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHG 119
DCS N N C G C C TTG C+ C G YG+A + C C+C
Sbjct: 8 DCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARIAKNCAVCNCGG-- 65
Query: 120 NSVLGVCDSITGECICQDNTQGKNCERCL 148
G CDS+TGEC+ + C++C+
Sbjct: 66 ----GPCDSVTGECLEEGFEPPTGCDKCV 90
>RGD|1308889 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005605 "basal lamina"
evidence=ISO;IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0022011 "myelination in peripheral
nervous system" evidence=IEP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEP] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=ISO] [GO:0042383
"sarcolemma" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:1308889 GO:GO:0007411 GO:GO:0030155 GO:GO:0043197
GO:GO:0030198 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 GO:GO:0022011 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 IPI:IPI00361301
PRIDE:F1M614 Ensembl:ENSRNOT00000014917 ArrayExpress:F1M614
Uniprot:F1M614
Length = 3085
Score = 186 (70.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 45/135 (33%), Positives = 63/135 (46%)
Query: 37 KCIYGYCKGP--PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
+C GY P P SCQ L +D S+ C++ S G C C TTG C+
Sbjct: 809 RCAEGYFGQPSIPGGSCQPCLCNDNLDFSIPGSCDSLS------GSCLICKPGTTGRFCE 862
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
C G +G+A + C+ C CN +G S +C TG+C C+ N QG+ C+ C P +G
Sbjct: 863 LCADGYFGDAVDAKNCQPCRCNVNG-SFSEICHRKTGQCECRPNVQGQRCDECKPETFGL 921
Query: 155 PTDGGTCYYQCMARG 169
G C + G
Sbjct: 922 QLGRGCIPCNCNSFG 936
Score = 167 (63.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 41/121 (33%), Positives = 54/121 (44%)
Query: 64 VNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDCN--SHG 119
V C C+ HS+ C +C C T GD C+ C G YG C+ C C S
Sbjct: 1381 VPCQCHGHSSQCDPETSVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCACPLISPS 1440
Query: 120 NSVLGVC--DSITG-ECI-CQDNTQGKNCERCLPGYYGDPTD-GGTCYY-QCMARGMLTG 173
N+ C + + C C +G+ CERC PGY G P+ GG+C +C G L
Sbjct: 1441 NNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYAGSPSSPGGSCQECECDPYGSLPV 1500
Query: 174 P 174
P
Sbjct: 1501 P 1501
Score = 164 (62.8 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 41/117 (35%), Positives = 53/117 (45%)
Query: 66 CLCNNHSTCVHGI-GICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGN 120
C C H+ + + G C C D T G +C C G YG+ T T E C+ C C N N
Sbjct: 720 CQCFGHAEACNDVTGECLSCKDHTGGPYCNECLPGFYGDPTRGTSEDCQPCACPLNIPSN 779
Query: 121 SVLGVC--DSITGECICQD---NTQGKNCERCLPGYYGDPT-DGGTCYYQCMARGML 171
+ C D G IC + G CERC GY+G P+ GG+C C+ L
Sbjct: 780 NFSPTCHLDRSLG-LICDECPVGYTGPRCERCAEGYFGQPSIPGGSCQ-PCLCNDNL 834
Score = 163 (62.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 48/159 (30%), Positives = 77/159 (48%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGV------DCSVNCLC------NNHS-TCV-HG 77
S+C N C + + G D+ +C LG+ G+ DC C C NN S +CV G
Sbjct: 1397 SVCQN-CQH-HTAG--DFCERCALGYYGIVRGLPNDCQP-CACPLISPSNNFSPSCVLEG 1451
Query: 78 IGI--CDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECI 134
+ C C G +C+ C G G+ ++ G C++C+C+ +G S+ CD +TG C
Sbjct: 1452 LEDYRCTACPRGYEGQYCERCAPGYAGSPSSPGGSCQECECDPYG-SLPVPCDPVTGLCT 1510
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
C+ G+ C+ C G+ + + C +C G+L G
Sbjct: 1511 CRPGATGRKCDGCEHGHAREGAECVFCGDECT--GLLLG 1547
Score = 161 (61.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 43/130 (33%), Positives = 55/130 (42%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG 102
CK P + Q LG + C+ N + C G C C G C C G Y
Sbjct: 914 CK-PETFGLQ--LGRGCIPCNCNSFGSKSFDC-EASGQC-WCQPGVAGKKCDRCAHG-YF 967
Query: 103 NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY 162
N + GC CDC+ GN+ C+ TG+CIC NT G+ C CLP +G G
Sbjct: 968 NFQ-EGGCTACDCSHLGNN----CNPKTGQCICPPNTIGEKCSECLPNTWGHSIVTGCKV 1022
Query: 163 YQCMARGMLT 172
C G L+
Sbjct: 1023 CNCSTVGSLS 1032
Score = 158 (60.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 78 IGICDECHDWTTGDHCQYCRAGSYG-NATTQEG-CRKCDCNSHGNSVLGVCDSITGECI- 134
+ +C +C +G C+ C N T G C C C H + C+ +TGEC+
Sbjct: 684 VEVC-QCPPGYSGSSCEACWPRHRRVNGTIFGGLCEPCQCFGHAEA----CNDVTGECLS 738
Query: 135 CQDNTQGKNCERCLPGYYGDPTDG 158
C+D+T G C CLPG+YGDPT G
Sbjct: 739 CKDHTGGPYCNECLPGFYGDPTRG 762
Score = 124 (48.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 45/144 (31%), Positives = 62/144 (43%)
Query: 63 SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSY---G-NATTQEGCRKCDCNSH 118
S N N H + G G+C C T G +C+ C G + G + + C+ C C+
Sbjct: 324 SRNLSLNIHGKYIGG-GVCINCTHNTAGINCETCIDGFFRPKGVSPSYPRPCQPCHCDPA 382
Query: 119 GNSVLGVC---DSIT------GECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
G S+ VC + T G C C+ G NC+RC+ GY G P D C C G
Sbjct: 383 G-SLSEVCIKDEKHTRRGLKPGSCYCKPGFGGMNCDRCVRGYRGYP-DCQPC--NCSGLG 438
Query: 170 MLTGPGPQGLGSGLAERNAWEGKD 193
T P +G + N EG+D
Sbjct: 439 S-TNQDPC-IGPCSCKENV-EGED 459
Score = 58 (25.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 315 QCVCPPRRTGPDCQEEICPN 334
QC+CPP G C E + PN
Sbjct: 992 QCICPPNTIGEKCSECL-PN 1010
Score = 55 (24.4 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 21/67 (31%), Positives = 26/67 (38%)
Query: 312 INN-QCVCPPRRTGPDCQEEICPNECH-EFLNHGTCDLLLTGVHIT----HGRTLHYQVD 365
IN QC C P+ +G C E C N H + CD L G T R
Sbjct: 1037 INTGQCSCHPKFSGMKCSE--C-NRGHWNYPLCSLCDCFLPGTDATTCDSETRKCSCSDQ 1093
Query: 366 LIRCTCR 372
+CTC+
Sbjct: 1094 TGQCTCK 1100
Score = 54 (24.1 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 286 GKPSEGFNATYQIFSCPDKCPENR---TCINNQCV------CPPRRTGPDCQ 328
G P+ G + Q +CP P N TC ++ + CP TGP C+
Sbjct: 757 GDPTRGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDECPVGYTGPRCE 808
Score = 51 (23.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 293 NATYQIFSCPDKC--PENRTCINNQCVCPPRRTGPDCQEEICP 333
+ T + SC D P C+ P R T DCQ CP
Sbjct: 731 DVTGECLSCKDHTGGPYCNECLPGFYGDPTRGTSEDCQPCACP 773
Score = 44 (20.5 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 17/56 (30%), Positives = 21/56 (37%)
Query: 304 KCPE-NRTCIN----NQCVC-PPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVH 353
KC E NR N + C C P C E C + TC + + GVH
Sbjct: 1052 KCSECNRGHWNYPLCSLCDCFLPGTDATTCDSETRKCSCSDQTGQCTCKVNVEGVH 1107
Score = 41 (19.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 315 QCVCPPRRTGPDCQ 328
+C CPP +G C+
Sbjct: 1342 RCDCPPGYSGLSCE 1355
Score = 39 (18.8 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 315 QCVCPPRRTGPDCQE 329
QC C P G C E
Sbjct: 899 QCECRPNVQGQRCDE 913
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 51 CQCELGWTGVDC 62
C C G++G+ C
Sbjct: 1343 CDCPPGYSGLSC 1354
Score = 38 (18.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 6/16 (37%), Positives = 7/16 (43%)
Query: 312 INNQCVCPPRRTGPDC 327
+ C C P TG C
Sbjct: 1505 VTGLCTCRPGATGRKC 1520
>ZFIN|ZDB-GENE-040724-213 [details] [associations]
symbol:lama4 "laminin, alpha 4" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IGI] [GO:0030903
"notochord development" evidence=IGI] [GO:0016203 "muscle
attachment" evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-040724-213 GO:GO:0030155
GO:GO:0048514 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0030903 GO:GO:0005606 CTD:3910
HOVERGEN:HBG052299 KO:K06241 EMBL:AY862414 IPI:IPI00862172
RefSeq:NP_001034154.1 UniGene:Dr.87613 ProteinModelPortal:Q2TJF5
STRING:Q2TJF5 GeneID:566796 KEGG:dre:566796 NextBio:20888381
Uniprot:Q2TJF5
Length = 1871
Score = 191 (72.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 42/113 (37%), Positives = 54/113 (47%)
Query: 66 CLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG---CRKCDC--NSHG 119
C C H+ +C GIC +C D T GD C+ C + +G CR C C +
Sbjct: 49 CNCKGHADSCEDITGICIDCRDHTLGDFCELCE-DRFLPVFLPDGTFMCRPCACPLSLES 107
Query: 120 NSVLGVCDSITGE---CICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
N+ CD GE C+CQD G CERC PGYYG+P + G +C G
Sbjct: 108 NNFAAHCDR-RGEFLRCVCQDGYAGHYCERCAPGYYGNPMELGNSCKKCDCNG 159
Score = 185 (70.2 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 63/198 (31%), Positives = 84/198 (42%)
Query: 28 IFNASLCYN---KCIYGYCKGPPDYSCQCELGWTG-----VDCSVNCLCNNHST--CVHG 77
IFN C+N KC+ + D +C G+ G DC C CN T C
Sbjct: 166 IFNE--CHNVTGKCLNCWGDTAGDNCERCAPGFYGDAISAKDCQ-ECQCNKCGTASCDDR 222
Query: 78 IGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G+C C TG C C G G T GCR+C+C S ++ C +T C C+
Sbjct: 223 SGVC-HCKPGVTGQLCDRCEDGHSGFCTCM-GCRRCECASA--ALRATCHPLTHSCQCRP 278
Query: 138 NTQGKNCERCLPGYYGDPTDGGTCYYQCMARG--MLTGPGPQGLGSGLAERNAWEGKDTP 195
G+ CERCLPG++ D + G C + TG L S ++E N D
Sbjct: 279 GAGGRYCERCLPGFW-DYSPSGCRKCDCPEENCDLHTGECLPEL-SQISECNI--SCDA- 333
Query: 196 SRECLW-IIGQSLDSNST 212
C+W +IG SN T
Sbjct: 334 ---CIWNLIGDIRQSNKT 348
Score = 178 (67.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 41/135 (30%), Positives = 63/135 (46%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNN-HSTCVHGIGICDECHDWTTGDHCQY 95
+C GY P + C+ DC+ N N + C + G C C T GD+C+
Sbjct: 136 RCAPGYYGNPMELGNSCKK----CDCNGNSDPNLIFNECHNVTGKCLNCWGDTAGDNCER 191
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C G YG+A + + C++C CN G + CD +G C C+ G+ C+RC G+ G
Sbjct: 192 CAPGFYGDAISAKDCQECQCNKCGTAS---CDDRSGVCHCKPGVTGQLCDRCEDGHSGFC 248
Query: 156 TDGGTCYYQCMARGM 170
T G +C + +
Sbjct: 249 TCMGCRRCECASAAL 263
>UNIPROTKB|O15230 [details] [associations]
symbol:LAMA5 "Laminin subunit alpha-5" species:9606 "Homo
sapiens" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0090002 "establishment of protein
localization to plasma membrane" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IC] [GO:0016477 "cell
migration" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=NAS] [GO:0008283 "cell proliferation" evidence=NAS]
[GO:0005605 "basal lamina" evidence=NAS] [GO:0048041 "focal
adhesion assembly" evidence=NAS] [GO:0009790 "embryo development"
evidence=NAS] [GO:0045446 "endothelial cell differentiation"
evidence=NAS] [GO:0008037 "cell recognition" evidence=NAS]
[GO:0001525 "angiogenesis" evidence=NAS] [GO:0005178 "integrin
binding" evidence=IDA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=NAS] [GO:0043259 "laminin-10 complex" evidence=IDA;TAS]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0043260 "laminin-11 complex" evidence=TAS]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IDA] InterPro:IPR001368 InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0007010
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0005198
GO:GO:0030324 GO:GO:0008283 GO:GO:0001755 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009790 GO:GO:0030334 GO:GO:0001942
GO:GO:0007517 GO:GO:0048041 GO:GO:0005178 PROSITE:PS01186
GO:GO:0007229 GO:GO:0042475 EMBL:AL354836 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384
GO:GO:0001738 GO:GO:0034446 GO:GO:0090002
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0016331
GO:GO:0001658 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
Pathway_Interaction_DB:syndecan_1_pathway GO:GO:0060445
Pfam:PF02210 GO:GO:0008037 DrugBank:DB00015 GO:GO:0045995
GO:GO:0045446 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
EMBL:AF443072 EMBL:AB067494 EMBL:AB011105 EMBL:Z95636
IPI:IPI00783665 RefSeq:NP_005551.3 UniGene:Hs.473256
ProteinModelPortal:O15230 SMR:O15230 IntAct:O15230
MINT:MINT-1183475 STRING:O15230 PhosphoSite:O15230 PaxDb:O15230
PRIDE:O15230 DNASU:3911 Ensembl:ENST00000252999 GeneID:3911
KEGG:hsa:3911 UCSC:uc002ycq.3 CTD:3911 GeneCards:GC20M060883
H-InvDB:HIX0015978 HGNC:HGNC:6485 MIM:601033 neXtProt:NX_O15230
PharmGKB:PA30274 InParanoid:O15230 OMA:LRHTTGP OrthoDB:EOG4VHK5G
ChiTaRS:LAMA5 GenomeRNAi:3911 NextBio:15363 ArrayExpress:O15230
Bgee:O15230 CleanEx:HS_LAMA5 Genevestigator:O15230
GermOnline:ENSG00000130702 GO:GO:0043259 GO:GO:0043260
Uniprot:O15230
Length = 3695
Score = 187 (70.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 47/143 (32%), Positives = 60/143 (41%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNN-HSTCVHGIGICDECHDWTTGDHCQY 95
+C G+ P C+ DCS N N S C G C C TTG C+
Sbjct: 1950 RCAPGFFGNPLVLGSSCQ----PCDCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPRCEI 2005
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
C G YGNA C +CDC G CD +G C+C+ G+ C+RC G++G
Sbjct: 2006 CAPGFYGNALLPGNCTRCDCTPCGTEA---CDPHSGHCLCKAGVTGRRCDRCQEGHFGFD 2062
Query: 156 TDGGTCYYQCMARGMLTGPGPQG 178
GG C R GP +G
Sbjct: 2063 GCGG-----C--RPCACGPAAEG 2078
Score = 178 (67.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 46/143 (32%), Positives = 65/143 (45%)
Query: 43 CKGPPDY---SCQ-CELGW----TGVDCS--VNCLCNNHST-CVHGIGICDECHDWTTGD 91
C P Y SCQ C G+ G+ V C C+ HS C+ G G+C +C T G
Sbjct: 1831 CLCPASYRGDSCQECAPGFYRDVKGLFLGRCVPCQCHGHSDRCLPGSGVCVDCQHNTEGA 1890
Query: 92 HCQYCRAGSYGNATTQEG-CRKCDC--NSHGNSVLGVCDSITG--ECICQDNTQGKNCER 146
HC+ C+AG + C C C + N+ C G +C+C+ G +CER
Sbjct: 1891 HCERCQAGFVSSRDDPSAPCVSCPCPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCER 1950
Query: 147 CLPGYYGDPTDGGTCYYQCMARG 169
C PG++G+P G+ C G
Sbjct: 1951 CAPGFFGNPLVLGSSCQPCDCSG 1973
Score = 169 (64.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 41/129 (31%), Positives = 59/129 (45%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHCQYCRAGSY 101
C+ P + C +G +CS + TC G C +C TG C C G +
Sbjct: 1512 CQ-PQTFGCHPLVGCEECNCSGPGIQELTDPTCDTDSGQC-KCRPNVTGRRCDTCSPGFH 1569
Query: 102 GNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGT 160
G CR CDC+ G + GVCD +TG+C C++N QG C++C G + D +
Sbjct: 1570 GYPR----CRPCDCHEAGTAP-GVCDPLTGQCYCKENVQGPKCDQCSLGTFSLDAANPKG 1624
Query: 161 CYYQCMARG 169
C +C G
Sbjct: 1625 CT-RCFCFG 1632
Score = 166 (63.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 41/132 (31%), Positives = 62/132 (46%)
Query: 41 GYCKGPPDYS---C-QCELGWTGV-DCSVNCLCNNHST----CVHGIGICDECHDWTTGD 91
G C P+++ C +C G+ G +C C C+ C G G+C C TG
Sbjct: 603 GRCLCQPEFAGPHCDRCRPGYHGFPNCQA-CTCDPRGALDQLCGAG-GLC-RCRPGYTGT 659
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
CQ C G +G + C C C++ G S+ CD +G+C C+ G C+ C+PG
Sbjct: 660 ACQECSPGFHGFPS----CVPCHCSAEG-SLHAACDPRSGQCSCRPRVTGLRCDTCVPGA 714
Query: 152 YGDP-TDGGTCY 162
Y P + G+C+
Sbjct: 715 YNFPYCEAGSCH 726
Score = 161 (61.7 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYGNAT----TQEGCRKCDCNSHGNSVLGVCDSITGE 132
G G+C +C TTG +C+ C G Y + + CR+C+C S G C+ +TG
Sbjct: 389 GGGVCIDCQHHTTGVNCERCLPGFYRSPNHPLDSPHVCRRCNCESDFTD--GTCEDLTGR 446
Query: 133 CICQDNTQGKNCERCLPGYYGDPTDGGTCY 162
C C+ N G+ C+ C G+ G P+ CY
Sbjct: 447 CYCRPNFSGERCDVCAEGFTGFPS----CY 472
Score = 151 (58.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 36/98 (36%), Positives = 47/98 (47%)
Query: 64 VNCLCNNHST----CVHG--IGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNS 117
VNC C+ T C +G C C G HC+ C G YG GC+ C C+S
Sbjct: 492 VNCDCSAAGTQGNACRKDPRVGRC-LCKPNFQGTHCELCAPGFYG-----PGCQPCQCSS 545
Query: 118 HGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
G + CD TG+C C+ +G C+RC PGY+ P
Sbjct: 546 PGVAD-DRCDPDTGQCRCRVGFEGATCDRCAPGYFHFP 582
Score = 147 (56.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 44/153 (28%), Positives = 65/153 (42%)
Query: 41 GYCKGPPDYS---CQ-CELGWTGVDCSVNCLCNN----HSTCVHGIGICDECHDWTTGDH 92
G C+ P Y+ CQ C G+ G V C C+ H+ C G C C TG
Sbjct: 648 GLCRCRPGYTGTACQECSPGFHGFPSCVPCHCSAEGSLHAACDPRSGQCS-CRPRVTGLR 706
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKNCERCLPGY 151
C C G+Y + G C+ G + + C+C+ + +G +C+RC PG+
Sbjct: 707 CDTCVPGAYNFPYCEAG----SCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDRCKPGF 762
Query: 152 YG-DPTDGGTCYY-QCMARGMLTGPGPQGLGSG 182
+G P++ C C RG L G G+G
Sbjct: 763 WGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTG 795
Score = 144 (55.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 45/152 (29%), Positives = 64/152 (42%)
Query: 32 SLCYNKC--IYGYCKGPPDYSC--QCEL---GWTGV-----DCSVNCLCNNHST--CVHG 77
+L ++ C + G C+G ++ +CE+ G+ G +C+ C C T C
Sbjct: 1978 NLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCT-RCDCTPCGTEACDPH 2036
Query: 78 IGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C C TG C C+ G +G GCR C C C +G+C C+
Sbjct: 2037 SGHC-LCKAGVTGRRCDRCQEGHFGFDGCG-GCRPCACGPAAEG--SECHPQSGQCHCRP 2092
Query: 138 NTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
T G C C PGY+G P G C +C G
Sbjct: 2093 GTMGPQCRECAPGYWGLPEQG--CR-RCQCPG 2121
Score = 143 (55.4 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 44/139 (31%), Positives = 57/139 (41%)
Query: 41 GYCKGPPDYS-CQCEL---GWTGVDCSVNCLCNNHST----CVHGIGICDECHDWTTGDH 92
G C P++ CEL G+ G C C C++ C G C C G
Sbjct: 513 GRCLCKPNFQGTHCELCAPGFYGPGCQP-CQCSSPGVADDRCDPDTGQC-RCRVGFEGAT 570
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C C G + C+ C C+ G G CD G C+CQ G +C+RC PGY+
Sbjct: 571 CDRCAPGYFHFPL----CQLCGCSPAGTLPEG-CDE-AGRCLCQPEFAGPHCDRCRPGYH 624
Query: 153 GDPTDGGTCYYQCMARGML 171
G P + C C RG L
Sbjct: 625 GFP-NCQAC--TCDPRGAL 640
Score = 135 (52.6 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 40/125 (32%), Positives = 50/125 (40%)
Query: 43 CK-GPPDYSC-QCELGWTGVD-CSV--NCLCN---NHSTCVHGIGICDECHDWTTGDHCQ 94
CK G C +C+ G G D C C C S C G C C T G C+
Sbjct: 2042 CKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSECHPQSGQC-HCRPGTMGPQCR 2100
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
C G +G ++GCR+C C G CD TG C C G+ C+ C +
Sbjct: 2101 ECAPGYWG--LPEQGCRRCQCPG------GRCDPHTGRCNCPPGLSGERCDTCSQQHQV- 2151
Query: 155 PTDGG 159
P GG
Sbjct: 2152 PVPGG 2156
Score = 133 (51.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 84 CHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGV--CDSITGECICQDNTQ 140
C G C C+ G +G + + EGC +C C+ G ++ GV C TG+C C+ +
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRG-TLGGVAECQPGTGQCFCKPHVC 804
Query: 141 GKNCERCLPGYYG-DPTDGGTCYYQC 165
G+ C C G++G D D Y+ C
Sbjct: 805 GQACASCKDGFFGLDQAD----YFGC 826
Score = 132 (51.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 40/125 (32%), Positives = 54/125 (43%)
Query: 42 YCKGPPDYSC-QCELGWTGVDCS-----VNCLCNNHST------CVHGIGICDECHDWTT 89
+ +GP SC +C+ G+ G+ S C C+ T C G G C C
Sbjct: 749 HVEGP---SCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCF-CKPHVC 804
Query: 90 GDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERC 147
G C C+ G +G + GCR C C+ G LG C+ TG C C+ NTQG C
Sbjct: 805 GQACASCKDGFFGLDQADYFGCRSCRCDIGG--ALGQSCEPRTGVCRCRPNTQGPTCSEP 862
Query: 148 LPGYY 152
+Y
Sbjct: 863 ARDHY 867
Score = 130 (50.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 37/102 (36%), Positives = 47/102 (46%)
Query: 64 VNCLCNNHSTCVHGIGICDEC------HDW--TTGDHCQYCRA-GSYGNATTQEGCRKCD 114
+ C C H+TC G G CD C W T + C++ YG+AT + D
Sbjct: 320 LQCTCQ-HNTC--G-GTCDRCCPGFNQQPWKPATANSANECQSCNCYGHATDCYYDPEVD 375
Query: 115 CNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
S+ G G CI CQ +T G NCERCLPG+Y P
Sbjct: 376 RRRASQSLDGTYQG-GGVCIDCQHHTTGVNCERCLPGFYRSP 416
Score = 130 (50.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 41/131 (31%), Positives = 55/131 (41%)
Query: 73 TCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
TC G C CH G C C G +G CR CDC + +CD +TG+
Sbjct: 1449 TCEPFGGQCP-CHAHVIGRDCSRCATGYWGFPN----CRPCDCGAR------LCDELTGQ 1497
Query: 133 CICQDNTQGKNCERCLPGYYG-DPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEG 191
CIC T +C C P +G P G C +C +GPG Q L + ++ +
Sbjct: 1498 CICPPRTIPPDCLLCQPQTFGCHPLVG--CE-ECNC----SGPGIQELTDPTCDTDSGQC 1550
Query: 192 KDTPS---REC 199
K P+ R C
Sbjct: 1551 KCRPNVTGRRC 1561
Score = 126 (49.4 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 39/129 (30%), Positives = 53/129 (41%)
Query: 51 CQCELGWTGVDC---SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
C CE +T C + C C + + CD C + TG Y S + Q
Sbjct: 429 CNCESDFTDGTCEDLTGRCYCRPNFSGER----CDVCAEGFTGFPSCYPTPSSSNDTREQ 484
Query: 108 ---EG-CRKCDCNSHGNSVLGVC--DSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G CDC++ G C D G C+C+ N QG +CE C PG+YG C
Sbjct: 485 VLPAGQIVNCDCSAAGTQG-NACRKDPRVGRCLCKPNFQGTHCELCAPGFYGPGCQ--PC 541
Query: 162 YYQCMARGM 170
QC + G+
Sbjct: 542 --QCSSPGV 548
Score = 102 (41.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 95 YCR-AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+CR A + + G R C C+ G + C+ G+C C + G++C RC GY+G
Sbjct: 1419 FCRNAAASLSLFYNNGARPCGCHEVG-ATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWG 1477
Query: 154 DP 155
P
Sbjct: 1478 FP 1479
Score = 81 (33.6 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 24/79 (30%), Positives = 33/79 (41%)
Query: 300 SC-PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNE---CHEFLNHGTCDLLLTGVH 353
+C P C R C + QC+CPPR PDC +C + CH + C+ G+
Sbjct: 1480 NCRPCDCGA-RLCDELTGQCICPPRTIPPDCL--LCQPQTFGCHPLVGCEECNCSGPGIQ 1536
Query: 354 ITHGRTLHYQVDLIRCTCR 372
T D +C CR
Sbjct: 1537 ELTDPTC--DTDSGQCKCR 1553
Score = 56 (24.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 26/95 (27%), Positives = 37/95 (38%)
Query: 282 HYKQGKPS-EGFNATYQIFSCPDKCPENRTC-INNQCVCPPRRTGPDCQEEICPNECHEF 339
H + +P GF Q +C + ++ C C C P TG CQE C H F
Sbjct: 615 HCDRCRPGYHGF-PNCQACTCDPRGALDQLCGAGGLCRCRPGYTGTACQE--CSPGFHGF 671
Query: 340 LNHGTCDLLLTGVHITHGRTLHYQVDLI--RCTCR 372
+ C H + +LH D +C+CR
Sbjct: 672 PSCVPC-------HCSAEGSLHAACDPRSGQCSCR 699
Score = 54 (24.1 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 302 PDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
P+ C E +C+C P GP C C H F N C
Sbjct: 596 PEGCDEA-----GRCLCQPEFAGPHCDR--CRPGYHGFPNCQAC 632
Score = 50 (22.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 313 NNQCVCPPRRTGPDCQE 329
+ QC C P GP C+E
Sbjct: 2085 SGQCHCRPGTMGPQCRE 2101
Score = 50 (22.7 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 20/51 (39%), Positives = 23/51 (45%)
Query: 304 KCPENRTCINNQC-VCPPRRTG-PDCQEEICPNECHEF-LNHGTCDLLLTG 351
KC N T +C C P G P C+ P +CHE G CD L TG
Sbjct: 1551 KCRPNVT--GRRCDTCSPGFHGYPRCR----PCDCHEAGTAPGVCDPL-TG 1594
Score = 48 (22.0 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 301 CPDKCPENRT---CI----NNQCVCPPRRTGPDCQ 328
CP P N C+ QC+C P G C+
Sbjct: 1915 CPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCE 1949
Score = 47 (21.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEF--LNHGTC 345
+ QC C PR TG C + C + F G+C
Sbjct: 693 SGQCSCRPRVTGLRC--DTCVPGAYNFPYCEAGSC 725
Score = 46 (21.3 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 304 KCPENRTCI--NNQCVCPPRRTGPDCQEEICPNECHE 338
+CP R C +C CPP +G C + C + H+
Sbjct: 2118 QCPGGR-CDPHTGRCNCPPGLSGERC--DTCSQQ-HQ 2150
Score = 45 (20.9 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 316 CVCPPRRTGPDCQE 329
C+CP G CQE
Sbjct: 1831 CLCPASYRGDSCQE 1844
Score = 44 (20.5 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 316 CVCPPRRTGPDCQEEICPNECH 337
C C P G +C + +CH
Sbjct: 2070 CACGPAAEGSECHPQ--SGQCH 2089
Score = 44 (20.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 7/14 (50%), Positives = 7/14 (50%)
Query: 316 CVCPPRRTGPDCQE 329
C C P GP C E
Sbjct: 848 CRCRPNTQGPTCSE 861
Score = 41 (19.5 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 6/18 (33%), Positives = 8/18 (44%)
Query: 312 INNQCVCPPRRTGPDCQE 329
+ QC C GP C +
Sbjct: 1592 LTGQCYCKENVQGPKCDQ 1609
Score = 40 (19.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 323 TGPDCQE--EICPNECHEFLNHGTCDLLLTG 351
TGP C+ CP CH + C TG
Sbjct: 1446 TGPTCEPFGGQCP--CHAHVIGRDCSRCATG 1474
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 315 QCVCPPRRTGPDCQEEIC 332
+C+C P G C E+C
Sbjct: 514 RCLCKPNFQGTHC--ELC 529
Score = 37 (18.1 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 193 DTPSRECLWIIGQSLDSNSTAPADIILLRLQ 223
D +R C + GQ + T P D +L + Q
Sbjct: 1485 DCGARLCDELTGQCICPPRTIPPDCLLCQPQ 1515
Score = 37 (18.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 316 CVCPPRRTGPDCQEEICPNECH-EFLN-HGTCDLLLTGVH 353
C C P T P+ +E C EF H CD G H
Sbjct: 587 CGCSPAGTLPEGCDEAGRCLCQPEFAGPH--CDRCRPGYH 624
>MGI|MGI:1344394 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
MGI:MGI:1344394 GO:GO:0007601 GO:GO:0007155 PROSITE:PS00022
GO:GO:0060041 PROSITE:PS01186 EMBL:CH466542 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
HOVERGEN:HBG100808 CTD:10319 KO:K06247 OrthoDB:EOG498TZW
EMBL:AF083372 EMBL:AL928893 EMBL:BX511243 EMBL:BC096366
EMBL:AF079520 IPI:IPI00756854 RefSeq:NP_035966.2 UniGene:Mm.302362
ProteinModelPortal:Q9R0B6 SMR:Q9R0B6 STRING:Q9R0B6 PaxDb:Q9R0B6
PRIDE:Q9R0B6 Ensembl:ENSMUST00000028187 GeneID:23928 KEGG:mmu:23928
OMA:QRGRRCE NextBio:303725 Bgee:Q9R0B6 CleanEx:MM_LAMC3
Genevestigator:Q9R0B6 GermOnline:ENSMUSG00000026840 Uniprot:Q9R0B6
Length = 1581
Score = 197 (74.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 46/129 (35%), Positives = 62/129 (48%)
Query: 47 PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT 106
P CQC G VD + C+ HS G C C TTG HC++CR G YG+A
Sbjct: 818 PCRRCQCS-G--NVDLNAVGNCDPHS------GHCLRCLYNTTGAHCEHCREGFYGSAVA 868
Query: 107 Q---EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYY 163
+ C C C+ G+ C+ +TG+C+C G++C RC PG+Y D G C
Sbjct: 869 TRPVDKCAPCSCDLRGSVSEKTCNPVTGQCVCLPYVSGRDCSRCSPGFY-DLQSGRGCQS 927
Query: 164 -QCMARGML 171
+C G L
Sbjct: 928 CKCHPLGSL 936
Score = 174 (66.3 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 47/142 (33%), Positives = 67/142 (47%)
Query: 61 DCSVNCLCNNHST-CV----------HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG 109
+C + C C+ HS C HG G C C D TTG HC+ C Y + +
Sbjct: 332 EC-LPCNCSGHSEECTFDRELYRSTGHG-GHCQRCRDHTTGPHCERCEKNYY-RWSPKTP 388
Query: 110 CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
C+ CDC+ G+ L CD+ +G C C+ G C+RCLPG++ ++GG C G
Sbjct: 389 CQPCDCHPAGSLSLQ-CDN-SGVCPCKPTVTGWKCDRCLPGFHS-LSEGGCRPCACNVAG 445
Query: 170 MLTGPGPQGLGSGLAERNAWEG 191
L P+ G+ + N EG
Sbjct: 446 SLGTCDPRS-GNCPCKENV-EG 465
Score = 172 (65.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 43/143 (30%), Positives = 65/143 (45%)
Query: 37 KCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
+C Y + P CQ C+ G S++ C+N G+C C TG C
Sbjct: 375 RCEKNYYRWSPKTPCQPCDCHPAG---SLSLQCDNS-------GVCP-CKPTVTGWKCDR 423
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-- 153
C G + + ++ GCR C CN G+ LG CD +G C C++N +G C+RC PG +
Sbjct: 424 CLPGFH--SLSEGGCRPCACNVAGS--LGTCDPRSGNCPCKENVEGSLCDRCRPGTFNLQ 479
Query: 154 --DPTDGGTCYYQCMARGMLTGP 174
+P +C+ C + P
Sbjct: 480 PHNPVGCSSCF--CYGHSKVCSP 500
Score = 165 (63.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 37/112 (33%), Positives = 51/112 (45%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT-- 106
Y + G +C + C CN H TC GIC C T G C+ C G YGNA +
Sbjct: 703 YKREIPHGGPYANC-IPCTCNQHGTCDPNTGIC-LCGHHTEGPSCERCMPGFYGNAFSGR 760
Query: 107 QEGCRKCDCNSHGNSVLGVCDSITGECICQD---NTQGKNCERCLPGYYGDP 155
+ C+ C C G S +G+ +C +G+ CE C G++GDP
Sbjct: 761 ADDCQPCPCP--GQSACATIPE-SGDVVCTHCPPGQRGRRCESCEDGFFGDP 809
Score = 163 (62.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 43/135 (31%), Positives = 62/135 (45%)
Query: 38 CIYGY-CKGPPDYSCQ-CELGWTGV-------DCSVNCLCNNHSTCV----HGIGICDEC 84
C+ G+ +GP SC+ C G+ G DC C C S C G +C C
Sbjct: 734 CLCGHHTEGP---SCERCMPGFYGNAFSGRADDCQP-CPCPGQSACATIPESGDVVCTHC 789
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI-CQDN 138
G C+ C G +G+ G CR+C C+ + + + +G CD +G C+ C N
Sbjct: 790 PPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPHSGHCLRCLYN 849
Query: 139 TQGKNCERCLPGYYG 153
T G +CE C G+YG
Sbjct: 850 TTGAHCEHCREGFYG 864
Score = 160 (61.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 31/79 (39%), Positives = 40/79 (50%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C TG C++C G Y G C C CN HG CD TG C+C +T
Sbjct: 687 CPQGYTGQFCEFCALG-YKREIPHGGPYANCIPCTCNQHGT-----CDPNTGICLCGHHT 740
Query: 140 QGKNCERCLPGYYGDPTDG 158
+G +CERC+PG+YG+ G
Sbjct: 741 EGPSCERCMPGFYGNAFSG 759
Score = 137 (53.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 31/99 (31%), Positives = 46/99 (46%)
Query: 60 VDCSVNCLCN-----NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCD 114
VD C C+ + TC G C C + +G C C G Y + + GC+ C
Sbjct: 872 VDKCAPCSCDLRGSVSEKTCNPVTGQC-VCLPYVSGRDCSRCSPGFY-DLQSGRGCQSCK 929
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C+ G S+ C TG+C C+ G+ C+RC G++G
Sbjct: 930 CHPLG-SLENKCHPKTGQCPCRPGVTGQACDRCQLGFFG 967
Score = 62 (26.9 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 22/74 (29%), Positives = 30/74 (40%)
Query: 264 DMHRGY--EVLEAKSGVMTIHYKQGKPSEGFNATYQIFSC-PDKCP-----ENRTC--IN 313
D H G+ L +G H ++G AT + C P C +TC +
Sbjct: 837 DPHSGHCLRCLYNTTGAHCEHCREGFYGSAV-ATRPVDKCAPCSCDLRGSVSEKTCNPVT 895
Query: 314 NQCVCPPRRTGPDC 327
QCVC P +G DC
Sbjct: 896 GQCVCLPYVSGRDC 909
Score = 52 (23.4 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 300 SC-PDKCPENRTCINNQ--CVCPPRRTGPDCQ 328
+C P C ++ TC N C+C GP C+
Sbjct: 715 NCIPCTCNQHGTCDPNTGICLCGHHTEGPSCE 746
Score = 42 (19.8 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHG 343
C+CP TG C E C + HG
Sbjct: 685 CLCPQGYTGQFC--EFCALGYKREIPHG 710
Score = 39 (18.8 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 313 NNQCVCPPRRTGPDC 327
N+ CVC P G C
Sbjct: 991 NSTCVCRPGFVGYKC 1005
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 23/84 (27%), Positives = 33/84 (39%)
Query: 261 CTEDMHRGYEVLEAKSGVMTI-HYKQGKPSE----GF--NA-TYQIFSC-PDKCPENRTC 311
CT + H G + +G+ H+ +G E GF NA + + C P CP C
Sbjct: 719 CTCNQH-G--TCDPNTGICLCGHHTEGPSCERCMPGFYGNAFSGRADDCQPCPCPGQSAC 775
Query: 312 INNQ------CV-CPPRRTGPDCQ 328
C CPP + G C+
Sbjct: 776 ATIPESGDVVCTHCPPGQRGRRCE 799
Score = 38 (18.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 315 QCVCPPRRTGPDC 327
QC C P TG C
Sbjct: 946 QCPCRPGVTGQAC 958
>WB|WBGene00002247 [details] [associations]
symbol:lam-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0060465 "pharynx development" evidence=IMP]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] GO:GO:0009792 GO:GO:0002119
InterPro:IPR016140 SMART:SM00499 GO:GO:0010171 GO:GO:0040011
GO:GO:0040017 GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 GO:GO:0060465
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 EMBL:FO080652 RefSeq:NP_500734.3
PaxDb:O44565 EnsemblMetazoa:W03F8.5 GeneID:177292
KEGG:cel:CELE_W03F8.5 UCSC:W03F8.5 CTD:177292 WormBase:W03F8.5
NextBio:896146 Uniprot:O44565
Length = 1790
Score = 190 (71.9 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 41/144 (28%), Positives = 65/144 (45%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWT 88
+ C +C + P + CE DC+ N +C G C +C T
Sbjct: 960 YQGERC-GECAQNHWGSPREVGGTCER----CDCNGNIDMAMEGSCDAATGECLKCLHHT 1014
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHG-NSVLGVCDSITGECICQDNTQGKNCERC 147
G C++C G YG+A + C++C CN G NS G CD ++G+C C DN G C++C
Sbjct: 1015 EGAQCEHCVDGYYGDAKLKT-CQRCVCNELGTNSTKGACDRVSGQCPCHDNIIGMQCDQC 1073
Query: 148 LPGYYGDPTDGGTCYYQCMARGML 171
++ + G C + G++
Sbjct: 1074 AENHFNLASGAGCEACGCDSNGVV 1097
Score = 186 (70.5 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 50/153 (32%), Positives = 68/153 (44%)
Query: 33 LCYNKCIYG-YCKGPPDYSCQCELGWTGV-DCSVNCLCNNHST-CVHGIGICDECHDWTT 89
+C K IYG C QC+ G+ G +C C CN+H+ C G C EC D TT
Sbjct: 847 VCREKGIYGRQCN-------QCQPGFWGFPECRT-CQCNDHANICDQSSGACIECRDLTT 898
Query: 90 GDHCQYCRAGSYGNATTQEG--CRKCDCNSHGNSVLGVCDSI----TGE------CICQD 137
G +C C+ G YG+ G C+ C C S D+ +G C C+
Sbjct: 899 GHYCDRCQDGYYGDPRLGVGIPCKPCPCPGGPTSGYQHADTCYLRNSGNNTQDIVCNCKS 958
Query: 138 NTQGKNCERCLPGYYGDPTD-GGTCYYQCMARG 169
QG+ C C ++G P + GGTC +C G
Sbjct: 959 GYQGERCGECAQNHWGSPREVGGTCE-RCDCNG 990
Score = 181 (68.8 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 44/116 (37%), Positives = 63/116 (54%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGC 110
C C+ TG SV+ +CN V G G C EC G C C G+YG + GC
Sbjct: 779 CNCDA--TG---SVSGICN-----VQG-GQC-ECKPNVVGRRCDQCAIGTYGFGPS--GC 824
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDN-TQGKNCERCLPGYYGDPTDGGTCYYQC 165
+KCDC++ G S+ CD +G+C+C++ G+ C +C PG++G P + TC QC
Sbjct: 825 KKCDCDAVG-SLGNDCDKQSGQCVCREKGIYGRQCNQCQPGFWGFP-ECRTC--QC 876
Score = 179 (68.1 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 45/132 (34%), Positives = 62/132 (46%)
Query: 33 LCYNKCIYGYCKGPPDYS-C-QCELG-W----TGVDCSVNCLCN-----NHSTCVHGIGI 80
L KC YCK D + C +C+ G W T VD V C CN N+ C G+
Sbjct: 430 LVAGKC---YCKTNVDGNRCDRCKNGYWNLTETNVDGCVACTCNLLGTYNNEGCDKYTGM 486
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C C TG++C C YG + +GC+ CDC+ G S C+ TG+C C++
Sbjct: 487 CT-CKRLVTGENCDQCLPEHYGLSEHVDGCKACDCDI-GGSYDNTCEITTGQCKCREGFS 544
Query: 141 GKNCERCLPGYY 152
G+ CE +Y
Sbjct: 545 GRRCETADSSFY 556
Score = 158 (60.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 49/152 (32%), Positives = 72/152 (47%)
Query: 37 KCIYGYCKGPPDYSCQ-CELGWTGVDCSVN----CLCNN---HST---CVHGIGICDECH 85
KC++ + +G C+ C G+ G D + C+CN +ST C G C CH
Sbjct: 1009 KCLH-HTEGA---QCEHCVDGYYG-DAKLKTCQRCVCNELGTNSTKGACDRVSGQCP-CH 1062
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVL---GV----CDSITGECICQDN 138
D G C C A ++ N + GC C C+S+G VL GV C+ G+C C+
Sbjct: 1063 DNIIGMQCDQC-AENHFNLASGAGCEACGCDSNG-VVLNHEGVPHLQCNIFDGQCQCKPG 1120
Query: 139 TQGKNCERCLPGYYGDPTDGGTCYY-QCMARG 169
G+ C++C Y+GDPT C+ +C G
Sbjct: 1121 RGGRKCDQCEDLYWGDPTTPDGCHRCECNPTG 1152
Score = 149 (57.5 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 67 LCNNHSTCVHGIGICDECHDWTT--GDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVL 123
+C G+ + +C+ T G+ C C+ G + T +GC C CN G
Sbjct: 419 ICEGEEDAERGL-VAGKCYCKTNVDGNRCDRCKNGYWNLTETNVDGCVACTCNLLGTYNN 477
Query: 124 GVCDSITGECICQDNTQGKNCERCLPGYYG--DPTDG 158
CD TG C C+ G+NC++CLP +YG + DG
Sbjct: 478 EGCDKYTGMCTCKRLVTGENCDQCLPEHYGLSEHVDG 514
Score = 149 (57.5 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 36/131 (27%), Positives = 56/131 (42%)
Query: 35 YNKCIYGYCKGPPDYSC-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
YN + G C QC + C + S V G G+CD+C T G +C
Sbjct: 325 YNDLPWRPAIGDEKNECRQCNCNRHALRCHFDRAVYESSGFVSG-GVCDDCMHNTQGKNC 383
Query: 94 QYCRAGSYGNA--TTQEG--CRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQG 141
+ C+ Y + T + C C+C+ G+ G+C+ + G+C C+ N G
Sbjct: 384 EQCKPFFYRDPRRTIDDPHVCLPCECDKAGSQNKGICEGEEDAERGLVAGKCYCKTNVDG 443
Query: 142 KNCERCLPGYY 152
C+RC GY+
Sbjct: 444 NRCDRCKNGYW 454
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 37/116 (31%), Positives = 48/116 (41%)
Query: 56 GWTGVDCSVNCLCNNHSTCVH-GIGICD---ECHDWTTGDHCQYCRAGSYGNATTQEGCR 111
G C N + NH H I D +C G C C +G+ TT +GC
Sbjct: 1085 GCEACGCDSNGVVLNHEGVPHLQCNIFDGQCQCKPGRGGRKCDQCEDLYWGDPTTPDGCH 1144
Query: 112 KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD-P--TDGGTCYYQ 164
+C+CN G+ L C G C CQ + G C C GY G P G C++Q
Sbjct: 1145 RCECNPTGSKSLQ-CHRNNGTCECQAGSGGALCNECARGYTGQWPYCNPCGECFHQ 1199
Score = 39 (18.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 17/61 (27%), Positives = 22/61 (36%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTGVHITHGRTLHYQVDLIRCTCR 372
QC C P G C + C + F G CD G + G Q +C CR
Sbjct: 797 QCECKPNVVGRRCDQ--CAIGTYGFGPSGCKKCDCDAVG---SLGNDCDKQSG--QCVCR 849
Query: 373 Q 373
+
Sbjct: 850 E 850
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 334 NE-CHEFLNHGTCDLLLTGVHITHGRTLHY 362
NE C ++ TC L+TG + HY
Sbjct: 477 NEGCDKYTGMCTCKRLVTGENCDQCLPEHY 506
>MGI|MGI:1918264 [details] [associations]
symbol:Megf9 "multiple EGF-like-domains 9" species:10090
"Mus musculus" [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001368
SMART:SM00208 MGI:MGI:1918264 GO:GO:0016021 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 CTD:1955 eggNOG:NOG302694
HOVERGEN:HBG080442 EMBL:AK035987 EMBL:AK039319 EMBL:AK052434
EMBL:AK122378 IPI:IPI00221701 RefSeq:NP_766282.1 UniGene:Mm.251188
ProteinModelPortal:Q8BH27 SMR:Q8BH27 STRING:Q8BH27
PhosphoSite:Q8BH27 PaxDb:Q8BH27 PRIDE:Q8BH27
Ensembl:ENSMUST00000107359 GeneID:230316 KEGG:mmu:230316
GeneTree:ENSGT00680000100051 HOGENOM:HOG000203602 InParanoid:Q8BH27
OMA:NGCLPCQ NextBio:379877 Bgee:Q8BH27 CleanEx:MM_MEGF9
Genevestigator:Q8BH27 GermOnline:ENSMUSG00000039270 Uniprot:Q8BH27
Length = 600
Score = 184 (69.8 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 45/132 (34%), Positives = 63/132 (47%)
Query: 66 CLCNNH---STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV 122
C C+ H S + G C +C TG C C+ G YG T GC C CN+ +S
Sbjct: 252 CHCSPHGAVSILCNSSGNC-QCKVGVTGSMCDKCQDGHYGFGKT--GCLPCQCNNRSDS- 307
Query: 123 LGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGS 181
CD TG C+ CQ+N++G++CE C G+Y P C+ +C + T G + S
Sbjct: 308 ---CDVHTGACLNCQENSKGEHCEECKEGFYPSPDAAKQCH-RCPCSAV-TSTGNCTIES 362
Query: 182 GLAERNAWEGKD 193
G E + KD
Sbjct: 363 GELEPTCDQCKD 374
Score = 171 (65.3 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 46/141 (32%), Positives = 67/141 (47%)
Query: 50 SCQCELGWTGVDCS-----------VNCL---CNNHS-TC-VHGIGICDECHDWTTGDHC 93
+CQC++G TG C CL CNN S +C VH G C C + + G+HC
Sbjct: 269 NCQCKVGVTGSMCDKCQDGHYGFGKTGCLPCQCNNRSDSCDVH-TGACLNCQENSKGEHC 327
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE----CI-CQDNTQGKNCERCL 148
+ C+ G Y + + C +C C++ ++ G C +GE C C+D G+NC +C
Sbjct: 328 EECKEGFYPSPDAAKQCHRCPCSAVTST--GNCTIESGELEPTCDQCKDGYTGQNCNKCE 385
Query: 149 PGYYGDPTDGGTCYYQCMARG 169
GYY + C QC G
Sbjct: 386 NGYYNSDS---ICT-QCECHG 402
Score = 158 (60.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 40/109 (36%), Positives = 55/109 (50%)
Query: 46 PPDYSCQC-ELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNA 104
PP++ C C E+G +D C N +T G CD CH G HC C+ G Y N
Sbjct: 197 PPEHMCNCSEVG--SLDVK-RC---NQTT-----GQCD-CHVGYQGLHCDTCKEGFYLNH 244
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
T C C C+ HG +V +C+S +G C C+ G C++C G+YG
Sbjct: 245 TVGL-CLPCHCSPHG-AVSILCNS-SGNCQCKVGVTGSMCDKCQDGHYG 290
Score = 157 (60.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 37 KCIYGYCKGPPDYSCQCE-LGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
+C G+ P D + QC + V + NC + CD+C D TG +C
Sbjct: 329 ECKEGFYPSP-DAAKQCHRCPCSAVTSTGNCTIESGEL----EPTCDQCKDGYTGQNCNK 383
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLG--VCDSITGECI-CQDNTQGKNCERCLPGYY 152
C G Y + + C +C+C+ H + + +C +GECI C NT G CE+CL GY
Sbjct: 384 CENGYYNSDSI---CTQCECHGHVDPIKTPKICKPESGECINCLHNTTGFWCEKCLEGYV 440
Query: 153 GD 154
D
Sbjct: 441 RD 442
>UNIPROTKB|F1NK49 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00596936
Ensembl:ENSGALT00000007355 ArrayExpress:F1NK49 Uniprot:F1NK49
Length = 1608
Score = 192 (72.6 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 43/96 (44%), Positives = 50/96 (52%)
Query: 64 VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGN 120
V C CN HS TC G+CD C D T G HC+ C G YG+AT T C+ C C G+
Sbjct: 721 VPCTCNGHSETCDPETGMCD-CRDNTAGSHCEKCSDGYYGDATAGTALDCQPCPCPG-GS 778
Query: 121 SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
S V + C CQ T GK CE C Y+GDP
Sbjct: 779 SCAVVPRTKEVVCTSCQTGTTGKRCELCDDAYFGDP 814
Score = 184 (69.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 44/133 (33%), Positives = 66/133 (49%)
Query: 41 GYCKGPPDYS----CQ-CELGWTGVDCSVNCL---CN---NHSTCVHGIGICDECHDWTT 89
G+C G D + C+ C + + CL CN + ST G C C
Sbjct: 364 GHCMGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCS-CKPGVM 422
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
G+ C C+ G + + ++ GCR C CN G++ G C+ TG C C+DN +G +CERC P
Sbjct: 423 GEKCDRCQPGFH--SLSEAGCRPCSCNPAGST--GECNMETGRCTCKDNVEGFHCERCKP 478
Query: 150 GYYG-DPTDGGTC 161
G++ DP++ C
Sbjct: 479 GFFHLDPSNPRGC 491
Score = 173 (66.0 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 42/133 (31%), Positives = 62/133 (46%)
Query: 34 CYNKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCV----HGIGICDECHDWT 88
C + +C+ D Y G T +DC C C S+C +C C T
Sbjct: 741 CRDNTAGSHCEKCSDGYYGDATAG-TALDCQP-CPCPGGSSCAVVPRTKEVVCTSCQTGT 798
Query: 89 TGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGK 142
TG C+ C +G+ + G CR C CN + + + +G C+ TGEC+ C NT G
Sbjct: 799 TGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQTGECLKCIYNTAGF 858
Query: 143 NCERCLPGYYGDP 155
C+RC G++G+P
Sbjct: 859 YCDRCKDGFFGNP 871
Score = 170 (64.9 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 44/132 (33%), Positives = 56/132 (42%)
Query: 37 KCIYG----YCKGPPDYSCQCELGWTGVDCSVNCLCNNHST------CVHGIGICDECHD 86
KCIY YC D L D C CN + T C G C EC
Sbjct: 850 KCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQC-ECLS 908
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
T C C G + N + GC +CDC++ G S G CD TG+C CQ G+ C+R
Sbjct: 909 HVTERDCSACEPGFF-NLQSGRGCERCDCHALG-STNGQCDIWTGQCECQPGVTGQRCDR 966
Query: 147 CLPGYYGDPTDG 158
C ++G +G
Sbjct: 967 CEANHFGFGPEG 978
Score = 159 (61.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 36/116 (31%), Positives = 53/116 (45%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGN--ATTQ-EGCRKCDCNSH 118
C+ N N C G C +C T G +C C+ G +GN AT + CR C CN +
Sbjct: 829 CNDNIDPNAVGNCNRQTGECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPY 888
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
G + C+ +TG+C C + ++C C PG++ + G C A G G
Sbjct: 889 GTVNQQTSCNQVTGQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNG 944
Score = 155 (59.6 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 32/73 (43%), Positives = 37/73 (50%)
Query: 90 GDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C+ C G Y T G C C CN H + CD TG C C+DNT G +CE
Sbjct: 697 GQFCERCSPG-YRRETPGLGPYSPCVPCTCNGHSET----CDPETGMCDCRDNTAGSHCE 751
Query: 146 RCLPGYYGDPTDG 158
+C GYYGD T G
Sbjct: 752 KCSDGYYGDATAG 764
Score = 145 (56.1 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 34/110 (30%), Positives = 49/110 (44%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG 102
C+ P ++ Q G DC + L + + C G C EC TG C C A +G
Sbjct: 918 CE-PGFFNLQSGRGCERCDC--HALGSTNGQCDIWTGQC-ECQPGVTGQRCDRCEANHFG 973
Query: 103 NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
EGC+ CDC+ G+ L C G C C++ G C++C Y+
Sbjct: 974 FGP--EGCKPCDCDPEGSRALQ-CRE-DGRCECKEGFVGSRCDQCEENYF 1019
Score = 133 (51.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 38/123 (30%), Positives = 51/123 (41%)
Query: 66 CLCNNH-STCVHG-IG--ICDECHDWTTGDHCQYC------RAGSYGNATTQEGCRKCDC 115
C CN H S C+ +G +C+ C T GD C+ C R A + C CDC
Sbjct: 285 CKCNGHASECIRNELGKLVCN-CKHNTFGDDCEKCLPFFNDRPWRRATAESANECLPCDC 343
Query: 116 NSHGNSV-----LGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
N L G C+ C+DNT G +CERC +Y ++ G C G
Sbjct: 344 NGRSQECYFDPELYRSTGHGGHCMGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVG 403
Query: 170 MLT 172
L+
Sbjct: 404 SLS 406
Score = 43 (20.2 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 19/64 (29%), Positives = 24/64 (37%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTGVHITHGRTLHYQVDLIRCTCR 372
QC C P TG C C F G CD G R L + D RC C+
Sbjct: 952 QCECQPGVTGQRCDR--CEANHFGFGPEGCKPCDCDPEG-----SRALQCREDG-RCECK 1003
Query: 373 QVYL 376
+ ++
Sbjct: 1004 EGFV 1007
Score = 43 (20.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/58 (27%), Positives = 20/58 (34%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCR 372
QC C P G C C H L+ C G T ++ RCTC+
Sbjct: 414 QCSCKPGVMGEKCDR--CQPGFHS-LSEAGCRPCSCN---PAGSTGECNMETGRCTCK 465
Score = 40 (19.1 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 310 TCINNQCVCPPRRTGPDCQEEICPNECHE 338
TC + C P DC++ + C +
Sbjct: 724 TCNGHSETCDPETGMCDCRDNTAGSHCEK 752
>UNIPROTKB|F1NSZ5 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0050873 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 OMA:QLDDYNA
EMBL:AADN02002050 EMBL:AADN02002048 EMBL:AADN02002049
IPI:IPI00578400 Ensembl:ENSGALT00000024193 Uniprot:F1NSZ5
Length = 1766
Score = 188 (71.2 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 45/118 (38%), Positives = 58/118 (49%)
Query: 62 CSVNCLCN-NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSH 118
CS C CN N + C+ G GIC +C TTG+HC+ C G G+ C+ C C
Sbjct: 13 CSP-CNCNGNANRCLDGSGICVDCQRNTTGEHCEQCPDGFVGDVVGGAPTFCQPCPCPLP 71
Query: 119 GNSVLGV-CDSITGE--CICQDNTQGKNCERCL---PGYYGDPT-DGGTCYYQCMARG 169
+ V C G C+C++N G NCE C PGYYG+P G TC +C G
Sbjct: 72 EAANFAVSCYRKNGNVRCVCKENYAGPNCESCAGVPPGYYGNPLLIGSTCK-KCDCSG 128
Score = 177 (67.4 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 55/171 (32%), Positives = 74/171 (43%)
Query: 45 GPPDYS--CQCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRA--- 98
G P + C C L + +V+C N + CV C E + G +C+ C
Sbjct: 58 GAPTFCQPCPCPLP-EAANFAVSCYRKNGNVRCV-----CKENY---AGPNCESCAGVPP 108
Query: 99 GSYGNATT-QEGCRKCDC--NSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGD 154
G YGN C+KCDC NS N + CD +TG+C C +T G CE+C PGYYGD
Sbjct: 109 GYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLHHTTGFKCEQCAPGYYGD 168
Query: 155 PTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWE-GKDTPS---RECLW 201
C C G + G LA+ G D P+ +C+W
Sbjct: 169 AIFAKNCT-ACNCGGRMCD---SRTGECLADSPLVSTGTDCPTISCDKCIW 215
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 37/109 (33%), Positives = 46/109 (42%)
Query: 43 CKG-PPDY-SCQCELGWT--GVDCSVNCLCNN-HSTCVHGIGICDECHDWTTGDHCQYCR 97
C G PP Y +G T DCS N N C G C C TTG C+ C
Sbjct: 103 CAGVPPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLHHTTGFKCEQCA 162
Query: 98 AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN--TQGKNC 144
G YG+A + C C+C +CDS TGEC+ + G +C
Sbjct: 163 PGYYGDAIFAKNCTACNCGGR------MCDSRTGECLADSPLVSTGTDC 205
>UNIPROTKB|F1S0X0 [details] [associations]
symbol:LAMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:FP236754 EMBL:CU407178 Ensembl:ENSSSCT00000006279
Uniprot:F1S0X0
Length = 1583
Score = 183 (69.5 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 47/136 (34%), Positives = 65/136 (47%)
Query: 38 CIYGY-CKGPPDYSCQ-CELGW-----TGV--DCSVNCLCNNHSTCV----HGIGICDEC 84
C+ G+ +GP SC+ C G+ TG DC C C S C G +C C
Sbjct: 729 CLCGHHTEGP---SCERCLPGFYGNPFTGQADDCQP-CPCPGQSACTTMPESGEVVCTHC 784
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI-CQDN 138
G C+ C G +G+ G CR C C+ + + + +G CD +TG C+ C N
Sbjct: 785 PPGQRGQRCEICDDGFFGDPLGLSGAPQPCRPCQCSGNVDPNAVGNCDPLTGHCLRCLHN 844
Query: 139 TQGKNCERCLPGYYGD 154
T G +CERC G+YGD
Sbjct: 845 TTGAHCERCQEGFYGD 860
Score = 179 (68.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 42/120 (35%), Positives = 55/120 (45%)
Query: 42 YCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
+C+ P Y + LG C V C+CN H TC GIC C T G C+ C G
Sbjct: 690 FCESCAPGYKRETPLGGPYASC-VPCICNQHGTCDPNTGIC-LCGHHTEGPSCERCLPGF 747
Query: 101 YGNATTQEG--CRKCDCNSHGNSVLGVCDSITGECICQD---NTQGKNCERCLPGYYGDP 155
YGN T + C+ C C G S +GE +C +G+ CE C G++GDP
Sbjct: 748 YGNPFTGQADDCQPCPCP--GQSACTTMPE-SGEVVCTHCPPGQRGQRCEICDDGFFGDP 804
Score = 178 (67.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 37 KCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
+C + + P CQ C+ G S++ C++ TC +C TG C
Sbjct: 372 RCQENFYRWNPQMPCQPCDCHPAG---SLHLQCDDSGTC--------KCKPTVTGWKCDR 420
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-D 154
C+ G + + ++ GCR C CNS G+ LG CD +G C C++N +G C+RC PG +
Sbjct: 421 CQPGFH--SLSEGGCRPCTCNSAGS--LGTCDPRSGRCPCKENVEGNLCDRCRPGTFNLQ 476
Query: 155 PTDGGTCYYQCMARG 169
P + C C G
Sbjct: 477 PHNPAGCS-SCFCYG 490
Score = 174 (66.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 38/104 (36%), Positives = 50/104 (48%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT---QEGCRKCDCNSH 118
CS N N C G C C TTG HC+ C+ G YG+A ++ C C CN
Sbjct: 819 CSGNVDPNAVGNCDPLTGHCLRCLHNTTGAHCERCQEGFYGDALASLPEDKCVPCSCNPG 878
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G+ CD +TG+C C + G++C C PG+Y D G C
Sbjct: 879 GSVGEQQPCDLVTGQCSCLPHVTGRDCGHCSPGFY-DLQPGRGC 921
Score = 162 (62.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 33/79 (41%), Positives = 41/79 (51%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C +G C+ C G Y T G C C CN HG CD TG C+C +T
Sbjct: 682 CPSGYSGQFCESCAPG-YKRETPLGGPYASCVPCICNQHGT-----CDPNTGICLCGHHT 735
Query: 140 QGKNCERCLPGYYGDPTDG 158
+G +CERCLPG+YG+P G
Sbjct: 736 EGPSCERCLPGFYGNPFTG 754
Score = 143 (55.4 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 43/154 (27%), Positives = 59/154 (38%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
G+C P Y Q G C + L + C G C C G C C+ G
Sbjct: 906 GHCS-PGFYDLQPGRGCRS--CKCHPLGSQEDQCHPKTGQCP-CRPGVEGQSCDRCQLGF 961
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGT 160
+G + GCR C C+ G + C C+C+ G C+RC ++ PT GGT
Sbjct: 962 FGFSI--RGCRACRCSPLG-AASAQCHE-NSTCVCRPGFVGYKCDRCQDNFF--PTAGGT 1015
Query: 161 CYYQCMARGMLTGPGPQGLGSGLAERNAW-EGKD 193
QC + L L + L W +G D
Sbjct: 1016 YCQQCPSCYTLVKEEAAKLKARLTLMEGWLQGSD 1049
Score = 140 (54.3 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 32/99 (32%), Positives = 44/99 (44%)
Query: 61 DCSVNCLCN------NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCD 114
D V C CN C G C C TG C +C G Y + GCR C
Sbjct: 868 DKCVPCSCNPGGSVGEQQPCDLVTGQCS-CLPHVTGRDCGHCSPGFY-DLQPGRGCRSCK 925
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C+ G+ C TG+C C+ +G++C+RC G++G
Sbjct: 926 CHPLGSQE-DQCHPKTGQCPCRPGVEGQSCDRCQLGFFG 963
Score = 118 (46.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 32/103 (31%), Positives = 43/103 (41%)
Query: 66 CLCNNH-STC---VHGIGICDECHDWTTGDHCQYC------RAGSYGNATTQEGCRKCDC 115
C CN H S C G C C TTG C+ C R + G A C C+C
Sbjct: 277 CKCNGHASECGPDEEGQLAC-RCQHNTTGPDCERCLPFFQDRPWARGTAEAANECLPCNC 335
Query: 116 NSHGNSVLGVCDSIT-----GECI-CQDNTQGKNCERCLPGYY 152
+ H + + G C+ C+D+T G +CERC +Y
Sbjct: 336 SGHSEECIFDRELFRTSGHGGRCLHCRDHTAGPHCERCQENFY 378
Score = 53 (23.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 300 SC-PDKCPENRTCINNQ--CVCPPRRTGPDCQ 328
SC P C ++ TC N C+C GP C+
Sbjct: 710 SCVPCICNQHGTCDPNTGICLCGHHTEGPSCE 741
Score = 52 (23.4 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 307 ENRTC--INNQCVCPPRRTGPDC 327
E + C + QC C P TG DC
Sbjct: 883 EQQPCDLVTGQCSCLPHVTGRDC 905
Score = 39 (18.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 313 NNQCVCPPRRTGPDC 327
N+ CVC P G C
Sbjct: 987 NSTCVCRPGFVGYKC 1001
>UNIPROTKB|F1PEZ5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AAEX03000448
EMBL:AAEX03000449 EMBL:AAEX03000450 EMBL:AAEX03000451
EMBL:AAEX03000452 EMBL:AAEX03000453 Ensembl:ENSCAFT00000036090
Uniprot:F1PEZ5
Length = 3085
Score = 185 (70.2 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 45/138 (32%), Positives = 66/138 (47%)
Query: 36 NKCIYGYCKGP--PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDH 92
++C GY P P SCQ C+ +D S+ C++ S G C C T G
Sbjct: 808 DRCAEGYFGQPSVPGGSCQPCQCN-DNLDFSIPGSCDSLS------GSCRICKPGTAGRR 860
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCLPGY 151
C+ C G +G+A + C+ C C H NS L C + TG+C C+ N QG+ C+ C P
Sbjct: 861 CELCADGYFGDAVEAKNCQPCGC--HVNSSLSESCHARTGQCECKPNVQGRRCDECKPET 918
Query: 152 YGDPTDGGTCYYQCMARG 169
+G + G +C + G
Sbjct: 919 FGLQSGRGCVPCKCNSFG 936
Score = 168 (64.2 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 49/144 (34%), Positives = 62/144 (43%)
Query: 43 CKGPPDYS-CQCELGWTG---VDCSV------NCLCNNHS-TCVHGIGICDECHDWTTGD 91
C+ PP YS CE W V+ +V C C H+ +C G C C D T G
Sbjct: 687 CQCPPGYSGSSCESCWPRHRRVNGTVFGGICEPCQCFGHAESCDDLTGECLNCKDHTGGP 746
Query: 92 HCQYCRAGSYGNAT--TQEGCRKCDC--NSHGNSVLGVCDSITG---EC-ICQDNTQGKN 143
HC C G YG+ + T E C C C + N+ C G C C G
Sbjct: 747 HCNQCLPGFYGDPSKGTSEDCLPCACPLSIPSNNFSPTCHLERGLGLMCDACPAGYTGPR 806
Query: 144 CERCLPGYYGDPT-DGGTCY-YQC 165
C+RC GY+G P+ GG+C QC
Sbjct: 807 CDRCAEGYFGQPSVPGGSCQPCQC 830
Score = 167 (63.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 33/84 (39%), Positives = 46/84 (54%)
Query: 78 IGICDECHDWTTGDHCQYCRAGSYG-NATTQEG-CRKCDCNSHGNSVLGVCDSITGECI- 134
+ +C +C +G C+ C N T G C C C H S CD +TGEC+
Sbjct: 684 VEVC-QCPPGYSGSSCESCWPRHRRVNGTVFGGICEPCQCFGHAES----CDDLTGECLN 738
Query: 135 CQDNTQGKNCERCLPGYYGDPTDG 158
C+D+T G +C +CLPG+YGDP+ G
Sbjct: 739 CKDHTGGPHCNQCLPGFYGDPSKG 762
Score = 163 (62.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 47/151 (31%), Positives = 70/151 (46%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGV------DCSVNCLC------NNHS-TCV-HG 77
S C N C + + G D+ +C LG+ G+ DC C C NN S +CV G
Sbjct: 1397 SKCQN-CQH-HTAG--DFCERCALGYYGIVRGLPNDCQ-QCACPLISSSNNFSPSCVLEG 1451
Query: 78 IGI--CDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECI 134
+ C C G +C+ C AG G+ + G C++C+C+ G+ L CD TG C
Sbjct: 1452 LDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGGTCQECECDPQGSLPLP-CDPATGLCT 1510
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
C+ G C+ C PG+ ++ C +C
Sbjct: 1511 CRPGATGPKCDGCQPGHARQGSECVFCGDEC 1541
Score = 163 (62.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 44/129 (34%), Positives = 53/129 (41%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG 102
CK P + Q G V C N + C G C C TG C C G Y
Sbjct: 914 CK-PETFGLQSGRGC--VPCKCNSFGSKSFDCEES-GQC-WCQPGVTGKKCDRCAHG-YF 967
Query: 103 NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY 162
N + GC CDC+ GN+ CD TG+CIC NT G+ C +C P +G G
Sbjct: 968 NFQ-EGGCTACDCSHLGNN----CDPKTGQCICPPNTVGEKCSKCSPNTWGHSIITGCKA 1022
Query: 163 YQCMARGML 171
C G L
Sbjct: 1023 CNCSTVGSL 1031
Score = 161 (61.7 bits), Expect = 9.7e-07, Sum P(3) = 9.7e-07
Identities = 44/130 (33%), Positives = 58/130 (44%)
Query: 64 VNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDCN--SHG 119
V C C+ HS+ C C C T GD C+ C G YG C++C C S
Sbjct: 1381 VPCQCHGHSSLCDPETSKCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQQCACPLISSS 1440
Query: 120 NSVLGVC--DSITG-ECI-CQDNTQGKNCERCLPGYYGDP-TDGGTCYY-QCMARGMLTG 173
N+ C + + C C +G+ CERC GY G P + GGTC +C +G L
Sbjct: 1441 NNFSPSCVLEGLDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGGTCQECECDPQGSL-- 1498
Query: 174 PGPQGLGSGL 183
P P +GL
Sbjct: 1499 PLPCDPATGL 1508
Score = 56 (24.8 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHG--TCDLLLTG-----VHITHGR-TLHYQVDL 366
QC+CPP G C + PN + G C+ G +I G+ + H +
Sbjct: 992 QCICPPNTVGEKCSK-CSPNTWGHSIITGCKACNCSTVGSLDFQCNINTGQCSCHPKFSG 1050
Query: 367 IRCT-CRQ 373
+CT C Q
Sbjct: 1051 AKCTECNQ 1058
Score = 46 (21.3 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 316 CVCPPRRTGPDC 327
C C P TGP C
Sbjct: 1509 CTCRPGATGPKC 1520
Score = 45 (20.9 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 16/62 (25%), Positives = 22/62 (35%)
Query: 316 CVC-PPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIR-CTCRQ 373
C C P C E C + TC + + GVH R ++ +D C Q
Sbjct: 1069 CECFLPGTDDRTCDPETKKCSCVDQTGQCTCKVNVEGVHCDRCRPGNFGLDAKNPLGCSQ 1128
Query: 374 VY 375
Y
Sbjct: 1129 CY 1130
Score = 39 (18.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 290 EGFNATYQIFSCPDKCPENRTCINNQCVC----PPRRTGPDCQEEIC 332
EG + Y+ +CP + E + C +C PR G CQE C
Sbjct: 1450 EGLD-DYRCTACP-RGYEGQYC--ERCSAGYTGSPRSPGGTCQECEC 1492
Score = 39 (18.8 bits), Expect = 9.7e-07, Sum P(3) = 9.7e-07
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 51 CQCELGWTGVDC 62
C+C G +G+ C
Sbjct: 1343 CECPAGHSGLSC 1354
>UNIPROTKB|F1PVY5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:AAEX03000448 EMBL:AAEX03000449 EMBL:AAEX03000450
EMBL:AAEX03000451 EMBL:AAEX03000452 EMBL:AAEX03000453
Ensembl:ENSCAFT00000001697 Uniprot:F1PVY5
Length = 3109
Score = 185 (70.2 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 45/138 (32%), Positives = 66/138 (47%)
Query: 36 NKCIYGYCKGP--PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDH 92
++C GY P P SCQ C+ +D S+ C++ S G C C T G
Sbjct: 831 DRCAEGYFGQPSVPGGSCQPCQCN-DNLDFSIPGSCDSLS------GSCRICKPGTAGRR 883
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCLPGY 151
C+ C G +G+A + C+ C C H NS L C + TG+C C+ N QG+ C+ C P
Sbjct: 884 CELCADGYFGDAVEAKNCQPCGC--HVNSSLSESCHARTGQCECKPNVQGRRCDECKPET 941
Query: 152 YGDPTDGGTCYYQCMARG 169
+G + G +C + G
Sbjct: 942 FGLQSGRGCVPCKCNSFG 959
Score = 164 (62.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/110 (35%), Positives = 52/110 (47%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG- 109
CQC G++G C N S + C W ++ R N T G
Sbjct: 692 CQCPPGYSGSSCEKRQQANASSNLIPASNT-KSC--WP-----RHRRV----NGTVFGGI 739
Query: 110 CRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDG 158
C C C H S CD +TGEC+ C+D+T G +C +CLPG+YGDP+ G
Sbjct: 740 CEPCQCFGHAES----CDDLTGECLNCKDHTGGPHCNQCLPGFYGDPSKG 785
Score = 163 (62.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 47/151 (31%), Positives = 70/151 (46%)
Query: 32 SLCYNKCIYGYCKGPPDYSCQCELGWTGV------DCSVNCLC------NNHS-TCV-HG 77
S C N C + + G D+ +C LG+ G+ DC C C NN S +CV G
Sbjct: 1420 SKCQN-CQH-HTAG--DFCERCALGYYGIVRGLPNDCQ-QCACPLISSSNNFSPSCVLEG 1474
Query: 78 IGI--CDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGECI 134
+ C C G +C+ C AG G+ + G C++C+C+ G+ L CD TG C
Sbjct: 1475 LDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGGTCQECECDPQGSLPLP-CDPATGLCT 1533
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
C+ G C+ C PG+ ++ C +C
Sbjct: 1534 CRPGATGPKCDGCQPGHARQGSECVFCGDEC 1564
Score = 163 (62.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 44/129 (34%), Positives = 53/129 (41%)
Query: 43 CKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG 102
CK P + Q G V C N + C G C C TG C C G Y
Sbjct: 937 CK-PETFGLQSGRGC--VPCKCNSFGSKSFDCEES-GQC-WCQPGVTGKKCDRCAHG-YF 990
Query: 103 NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY 162
N + GC CDC+ GN+ CD TG+CIC NT G+ C +C P +G G
Sbjct: 991 NFQ-EGGCTACDCSHLGNN----CDPKTGQCICPPNTVGEKCSKCSPNTWGHSIITGCKA 1045
Query: 163 YQCMARGML 171
C G L
Sbjct: 1046 CNCSTVGSL 1054
Score = 161 (61.7 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 44/130 (33%), Positives = 58/130 (44%)
Query: 64 VNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQEGCRKCDCN--SHG 119
V C C+ HS+ C C C T GD C+ C G YG C++C C S
Sbjct: 1404 VPCQCHGHSSLCDPETSKCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQQCACPLISSS 1463
Query: 120 NSVLGVC--DSITG-ECI-CQDNTQGKNCERCLPGYYGDP-TDGGTCYY-QCMARGMLTG 173
N+ C + + C C +G+ CERC GY G P + GGTC +C +G L
Sbjct: 1464 NNFSPSCVLEGLDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGGTCQECECDPQGSL-- 1521
Query: 174 PGPQGLGSGL 183
P P +GL
Sbjct: 1522 PLPCDPATGL 1531
Score = 157 (60.3 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 39/111 (35%), Positives = 49/111 (44%)
Query: 66 CLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDC--NSHGN 120
C C H+ +C G C C D T G HC C G YG+ + T E C C C + N
Sbjct: 743 CQCFGHAESCDDLTGECLNCKDHTGGPHCNQCLPGFYGDPSKGTSEDCLPCACPLSIPSN 802
Query: 121 SVLGVCDSITG---EC-ICQDNTQGKNCERCLPGYYGDPT-DGGTCY-YQC 165
+ C G C C G C+RC GY+G P+ GG+C QC
Sbjct: 803 NFSPTCHLERGLGLMCDACPAGYTGPRCDRCAEGYFGQPSVPGGSCQPCQC 853
Score = 56 (24.8 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHG--TCDLLLTG-----VHITHGR-TLHYQVDL 366
QC+CPP G C + PN + G C+ G +I G+ + H +
Sbjct: 1015 QCICPPNTVGEKCSK-CSPNTWGHSIITGCKACNCSTVGSLDFQCNINTGQCSCHPKFSG 1073
Query: 367 IRCT-CRQ 373
+CT C Q
Sbjct: 1074 AKCTECNQ 1081
Score = 55 (24.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 17/51 (33%), Positives = 21/51 (41%)
Query: 286 GKPSEGFNATYQIFSCPDKCPENR---TC-----INNQC-VCPPRRTGPDC 327
G PS+G + +CP P N TC + C CP TGP C
Sbjct: 780 GDPSKGTSEDCLPCACPLSIPSNNFSPTCHLERGLGLMCDACPAGYTGPRC 830
Score = 46 (21.3 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 316 CVCPPRRTGPDC 327
C C P TGP C
Sbjct: 1532 CTCRPGATGPKC 1543
Score = 45 (20.9 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 16/62 (25%), Positives = 22/62 (35%)
Query: 316 CVC-PPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIR-CTCRQ 373
C C P C E C + TC + + GVH R ++ +D C Q
Sbjct: 1092 CECFLPGTDDRTCDPETKKCSCVDQTGQCTCKVNVEGVHCDRCRPGNFGLDAKNPLGCSQ 1151
Query: 374 VY 375
Y
Sbjct: 1152 CY 1153
Score = 39 (18.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 290 EGFNATYQIFSCPDKCPENRTCINNQCVC----PPRRTGPDCQEEIC 332
EG + Y+ +CP + E + C +C PR G CQE C
Sbjct: 1473 EGLD-DYRCTACP-RGYEGQYC--ERCSAGYTGSPRSPGGTCQECEC 1515
Score = 39 (18.8 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 315 QCVCPPRRTGPDCQE 329
QC C P G C E
Sbjct: 922 QCECKPNVQGRRCDE 936
Score = 39 (18.8 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 51 CQCELGWTGVDC 62
C+C G +G+ C
Sbjct: 1366 CECPAGHSGLSC 1377
>UNIPROTKB|H7C557 [details] [associations]
symbol:MEGF6 "Multiple epidermal growth factor-like domains
protein 6" species:9606 "Homo sapiens" [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
EMBL:AL512413 Pfam:PF12661 EMBL:AL513320 HGNC:HGNC:3232
ProteinModelPortal:H7C557 Ensembl:ENST00000485002 Uniprot:H7C557
Length = 1156
Score = 163 (62.4 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 42/122 (34%), Positives = 56/122 (45%)
Query: 41 GYCKGPPD---YSCQ--CELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHC- 93
G+C P +SCQ C+ G G DCS C C+ H +C G+C C G C
Sbjct: 683 GHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDAISGLC-LCEAGYVGPRCE 741
Query: 94 QYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GY 151
Q C G +G GC ++C C HG CD ++G C C +G CE P G+
Sbjct: 742 QQCPQGHFG-----PGCEQRCQCQ-HG----AACDHVSGACTCPAGWRGTFCEHACPAGF 791
Query: 152 YG 153
+G
Sbjct: 792 FG 793
Score = 159 (61.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 37/107 (34%), Positives = 50/107 (46%)
Query: 51 CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQ 107
CQ C GW G C C C N C G C WT G CQ C G +G
Sbjct: 653 CQDVCPAGWYGPSCQTRCSCANDGHCHPATGHCSCAPGWT-GFSCQRACDTGHWG----P 707
Query: 108 EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ C+C++ G+ G CD+I+G C+C+ G CE+ C G++G
Sbjct: 708 DCSHPCNCSA-GH---GSCDAISGLCLCEAGYVGPRCEQQCPQGHFG 750
Score = 157 (60.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 39/99 (39%), Positives = 49/99 (49%)
Query: 59 GVDCSVNCL-CNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDC 115
G DCS+ C C N TC+ G+ CD C + TG C + C ++G + C C C
Sbjct: 357 GHDCSLTCDDCRNGGTCLLGLDGCD-CPEGWTGLICNETCPPDTFG-----KNCSFSCSC 410
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ G G CDS+TG C C G NCE C GYYG
Sbjct: 411 QN-G----GTCDSVTGACRCPPGVSGTNCEDGCPKGYYG 444
Score = 149 (57.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 42/123 (34%), Positives = 57/123 (46%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDH 92
C +C G+ +G D +C +G GV+CS +C C + C HG+ G C C TG+
Sbjct: 554 CGKRCPAGF-QGE-DCGQECPVGTFGVNCSSSCSCGG-APC-HGVTGQC-RCPPGRTGED 608
Query: 93 CQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-G 150
C+ C G +G QE C C H CD TG C+C G C+ P G
Sbjct: 609 CEADCPEGRWGLGC-QEICPACQ---HAAR----CDPETGACLCLPGFVGSRCQDVCPAG 660
Query: 151 YYG 153
+YG
Sbjct: 661 WYG 663
Score = 147 (56.8 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 63/222 (28%), Positives = 90/222 (40%)
Query: 31 ASLCYN--KC--IYGYCKGPPDY---SC--QCELGWTGVDCSVNCLCNNHSTCVHGIGIC 81
A C+N C ++G C P + SC C G G +C +CLC N TC G C
Sbjct: 842 ACACFNGASCDPVHGQCHCAPGWMGPSCLQACPAGLYGDNCRHSCLCQNGGTCDPVSGHC 901
Query: 82 DECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C + G C+ C + GCR +S G G+CD TG C+C
Sbjct: 902 -ACPEGWAGLACEKECLPRD-----VRAGCR----HSGGCLNGGLCDPHTGRCLCPAGWT 951
Query: 141 GKNCER-CLPGYYGDPTDGG-TCYY--QC-MARGM-LTGPGPQGL-GSGLAERNAWEGKD 193
G C+ C G +G +G C + C +A G L PG +G G + A +
Sbjct: 952 GDKCQSPCAKGTFGPHCEGRCACRWGGPCHLATGACLCPPGWRGAPGVRMPACGAGLERP 1011
Query: 194 TPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAV 235
PS + + + S PA + L L P + P + A+
Sbjct: 1012 VPSAAAARLALPA--TTSLGPAAVPLASLAPAASRPAHPAAL 1051
Score = 144 (55.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 42/137 (30%), Positives = 53/137 (38%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTG 90
+ LC C GY GP QC G G C C C + + C H G C W G
Sbjct: 726 SGLCL--CEAGYV-GPRCEQ-QCPQGHFGPGCEQRCQCQHGAACDHVSGACTCPAGWR-G 780
Query: 91 DHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCL 148
C++ C AG +G DC S N G CD++ G C+C +G C
Sbjct: 781 TFCEHACPAGFFG----------LDCRSACNCTAGAACDAVNGSCLCPAGRRGPRCAETC 830
Query: 149 PGYYGDPTDGGTCYYQC 165
P + T G C C
Sbjct: 831 PAH----TYGHNCSQAC 843
Score = 141 (54.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 41/132 (31%), Positives = 55/132 (41%)
Query: 51 CQCELGWTGV-------------DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
C C GWTG+ +CS +C C N TC G C C +G +C+ C
Sbjct: 380 CDCPEGWTGLICNETCPPDTFGKNCSFSCSCQNGGTCDSVTGAC-RCPPGVSGTNCEDGC 438
Query: 97 RAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYGD 154
G YG + CRK C+C + G C + G C+C G+ C C P +G
Sbjct: 439 PKGYYG-----KHCRKKCNCANRGR-----CHRLYGACLCDPGLYGRFCHLTCPPWAFG- 487
Query: 155 PTDGGTCYYQCM 166
P C QC+
Sbjct: 488 PGCSEEC--QCV 497
Score = 136 (52.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 29 FNASLCYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIG 79
F+ S C N C + G C+ PP S C+ C G+ G C C C N C G
Sbjct: 406 FSCS-CQNGGTCDSVTGACRCPPGVSGTNCEDGCPKGYYGKHCRKKCNCANRGRCHRLYG 464
Query: 80 ICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDC-NSHGNSVLGVCDSITGECICQD 137
C C G C C ++G ++E C C H S CD G C C+
Sbjct: 465 AC-LCDPGLYGRFCHLTCPPWAFGPGCSEE----CQCVQPHTQS----CDKRDGSCSCKA 515
Query: 138 NTQGKNCE-RCLPGYYG 153
+G+ C+ C GY+G
Sbjct: 516 GFRGERCQAECELGYFG 532
Score = 135 (52.6 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 39/105 (37%), Positives = 49/105 (46%)
Query: 53 CELGWTGVDCSVNCLCNNHSTC--VHGIGICDECH---DWTTGDHC-QYCRAGSYGNATT 106
C G +CS C C N ++C VHG +CH W G C Q C AG YG
Sbjct: 830 CPAHTYGHNCSQACACFNGASCDPVHG-----QCHCAPGWM-GPSCLQACPAGLYG---- 879
Query: 107 QEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLP 149
+ CR C C + G G CD ++G C C + G CE+ CLP
Sbjct: 880 -DNCRHSCLCQN-G----GTCDPVSGHCACPEGWAGLACEKECLP 918
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 42/138 (30%), Positives = 56/138 (40%)
Query: 39 IYGYCKGPP-----DYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDH 92
+ G C+ PP D C G G+ C C C + + C G C C G
Sbjct: 594 VTGQCRCPPGRTGEDCEADCPEGRWGLGCQEICPACQHAARCDPETGAC-LCLPGFVGSR 652
Query: 93 CQ-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLP 149
CQ C AG YG + C+ +C C + G+ C TG C C G +C+R C
Sbjct: 653 CQDVCPAGWYGPS-----CQTRCSCANDGH-----CHPATGHCSCAPGWTGFSCQRACDT 702
Query: 150 GYYGDPTDGGTCYYQCMA 167
G++G P C C A
Sbjct: 703 GHWG-PDCSHPC--NCSA 717
Score = 120 (47.3 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 37/118 (31%), Positives = 49/118 (41%)
Query: 43 CK-GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDE-CHDWTTGDHC-QYCR 97
CK G CQ CELG+ G C C C C G C + C G+ C Q C
Sbjct: 513 CKAGFRGERCQAECELGYFGPGCWQACTCPVGVACDSVSGECGKRCPAGFQGEDCGQECP 572
Query: 98 AGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
G++G N ++ C C C +TG+C C G++CE C G +G
Sbjct: 573 VGTFGVNCSSS-----CSCGG------APCHGVTGQCRCPPGRTGEDCEADCPEGRWG 619
Score = 103 (41.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 34/107 (31%), Positives = 44/107 (41%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDE-CHDWTTGDHC-QYCRAGSYG-NATTQE 108
+CELG+ G C C C C G C + C G+ C Q C G++G N ++
Sbjct: 525 ECELGYFGPGCWQACTCPVGVACDSVSGECGKRCPAGFQGEDCGQECPVGTFGVNCSSSC 584
Query: 109 GCRKCDCNSHGNSVLGVC---DSITGE-CI--CQDNTQGKNCERCLP 149
C C HG V G C TGE C C + G C+ P
Sbjct: 585 SCGGAPC--HG--VTGQCRCPPGRTGEDCEADCPEGRWGLGCQEICP 627
Score = 100 (40.3 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 35/120 (29%), Positives = 47/120 (39%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDE-CHDWTTGDH 92
C ++C+ P Y C+C+ G+ S CL N +C G G C C T H
Sbjct: 12 CQHRCV----NTPGSYLCECKPGFRLHTDSRTCLAIN--SCALGNGGCQHHCVQLTITRH 65
Query: 93 -CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQ----GKNCE 145
CQ CR G + R+ C + S + C + G C C Q GK CE
Sbjct: 66 RCQ-CRPGFQLQEDGRHCVRRSPCANRNGSCMHRCQVVRGLARCECHVGYQLAADGKACE 124
Score = 100 (40.3 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 37/128 (28%), Positives = 48/128 (37%)
Query: 53 CELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGC 110
C+ G G DCS C C+ H +C G+C C G C Q C G +G Q C
Sbjct: 700 CDTGHWGPDCSHPCNCSAGHGSCDAISGLC-LCEAGYVGPRCEQQCPQGHFGPGCEQR-C 757
Query: 111 RKCDCNSHGNSVLGVCDSITG------ECICQDNTQGKNCE---RCLPGYYGDPTDGGTC 161
+ C + + V G C G E C G +C C G D +G +C
Sbjct: 758 Q-CQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSACNCTAGAACDAVNG-SC 815
Query: 162 YYQCMARG 169
RG
Sbjct: 816 LCPAGRRG 823
Score = 77 (32.2 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 300 SCPDKCP-ENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C C C + QC CPP RTG DC+ + CP
Sbjct: 579 NCSSSCSCGGAPCHGVTGQCRCPPGRTGEDCEAD-CP 614
Score = 70 (29.7 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C C +N C+CP R GP C E CP
Sbjct: 802 CTAGAACDAVNGSCLCPAGRRGPRCAET-CP 831
Score = 70 (29.7 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 25/82 (30%), Positives = 32/82 (39%)
Query: 304 KC-PENRTC------INNQC--VCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTG 351
+C PE C + ++C VCP GP CQ C N+ CH H +C TG
Sbjct: 634 RCDPETGACLCLPGFVGSRCQDVCPAGWYGPSCQTRCSCANDGHCHPATGHCSCAPGWTG 693
Query: 352 VHITHG-RTLHYQVDLIR-CTC 371
T H+ D C C
Sbjct: 694 FSCQRACDTGHWGPDCSHPCNC 715
Score = 69 (29.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 299 FSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
FSC C TC + C CPP +G +C E+ CP
Sbjct: 406 FSC--SCQNGGTCDSVTGACRCPPGVSGTNC-EDGCP 439
Score = 68 (29.0 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 19/52 (36%), Positives = 24/52 (46%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP-----NEC-HEFL--NHGTCD 346
C +C ++ QC C P GP C + CP + C H L N GTCD
Sbjct: 845 CFNGASCDPVHGQCHCAPGWMGPSCLQA-CPAGLYGDNCRHSCLCQNGGTCD 895
Score = 66 (28.3 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEICP 333
+CP RT + + CP R G CQE ICP
Sbjct: 599 RCPPGRTGEDCEADCPEGRWGLGCQE-ICP 627
Score = 65 (27.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE----C-HE--FLNHGTCD 346
C TC ++ C CP G C++E P + C H LN G CD
Sbjct: 888 CQNGGTCDPVSGHCACPEGWAGLACEKECLPRDVRAGCRHSGGCLNGGLCD 938
Score = 59 (25.8 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 17/61 (27%), Positives = 23/61 (37%)
Query: 300 SCPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHGTCDL 347
SC +C + C C C P TG CQ C + C+ HG+CD
Sbjct: 665 SCQTRCSCANDGHCHPATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDA 724
Query: 348 L 348
+
Sbjct: 725 I 725
Score = 51 (23.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 305 CPENRTC--INNQCV--CPPRRTGPDCQEEICP 333
CP C ++ +C CP G DC +E CP
Sbjct: 541 CPVGVACDSVSGECGKRCPAGFQGEDCGQE-CP 572
Score = 51 (23.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 300 SCPDKCPENR-TC--INNQCVCPPRRTGPDCQEEICP 333
S P C +C I+ C+C GP C+++ CP
Sbjct: 710 SHPCNCSAGHGSCDAISGLCLCEAGYVGPRCEQQ-CP 745
Score = 50 (22.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEE 330
C CPE R + Q +CP + C E
Sbjct: 609 CEADCPEGRWGLGCQEICPACQHAARCDPE 638
Score = 49 (22.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C C ++ C CP G C E CP
Sbjct: 758 QCQHGAACDHVSGACTCPAGWRGTFC-EHACP 788
Score = 48 (22.0 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 318 CPPRRTGPDCQEE 330
CPP GP C EE
Sbjct: 481 CPPWAFGPGCSEE 493
Score = 44 (20.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 315 QCVCPPRRTGPDCQ 328
+C+CP TG CQ
Sbjct: 943 RCLCPAGWTGDKCQ 956
Score = 39 (18.8 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 14/44 (31%), Positives = 15/44 (34%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEI-CP--NECHEFLNHGTC 345
CP T Q C GP C+ C CH L G C
Sbjct: 946 CPAGWTGDKCQSPCAKGTFGPHCEGRCACRWGGPCH--LATGAC 987
>MGI|MGI:1934028 [details] [associations]
symbol:Ntng1 "netrin G1" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:1934028 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:22854 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 EMBL:AB038662 EMBL:AB038663
EMBL:AB038664 EMBL:AB038665 EMBL:AB038666 EMBL:AB038667
EMBL:AF475069 EMBL:AF475070 EMBL:AF475071 EMBL:AF475072
EMBL:AF475073 EMBL:AF475074 EMBL:AF475075 EMBL:AF475076
EMBL:AF475077 EMBL:AF475078 EMBL:AK034465 EMBL:AK173075
EMBL:BC079881 IPI:IPI00323012 IPI:IPI00323015 IPI:IPI00323016
IPI:IPI00323017 IPI:IPI00354768 IPI:IPI00354771 IPI:IPI00354773
IPI:IPI00465860 IPI:IPI00469999 IPI:IPI00742371
RefSeq:NP_001156820.1 RefSeq:NP_001156821.1 RefSeq:NP_001156822.1
RefSeq:NP_001156823.1 RefSeq:NP_109624.1 RefSeq:NP_597995.1
UniGene:Mm.39262 ProteinModelPortal:Q8R4G0 SMR:Q8R4G0 STRING:Q8R4G0
PRIDE:Q8R4G0 Ensembl:ENSMUST00000072596 GeneID:80883 KEGG:mmu:80883
UCSC:uc008rai.2 UCSC:uc008raj.2 UCSC:uc008rak.2 UCSC:uc008ral.2
UCSC:uc008ram.2 UCSC:uc008rao.2 UCSC:uc008rap.1 UCSC:uc008raq.1
UCSC:uc008rar.2 InParanoid:Q8R4G0 NextBio:350195 Bgee:Q8R4G0
CleanEx:MM_NTNG1 Genevestigator:Q8R4G0
GermOnline:ENSMUSG00000059857 Uniprot:Q8R4G0
Length = 539
Score = 163 (62.4 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 40/101 (39%), Positives = 50/101 (49%)
Query: 65 NCLCNNHST-CVH----GIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EG-CRKCDC 115
NC C HS C + IC C T G HC+ CR G + NA+ Q E C +C C
Sbjct: 363 NCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIECYC 422
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG---YYG 153
N G S+ C+ +G C C+ T G C+ CLPG YYG
Sbjct: 423 NPLG-SIHDRCNG-SGFCECKTGTTGPKCDECLPGNSWYYG 461
Score = 96 (38.9 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 29/118 (24%), Positives = 49/118 (41%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
C+Y K +C+CE TG DC C N W+ G + +
Sbjct: 306 CLYDNSK----LTCECEHNTTGPDCG-KCKKNYQG------------RPWSPGSYLPIPK 348
Query: 98 AGSYGNATTQEGCRKCDCNSHGN--SVLGVCDSITGECI-CQDNTQGKNCERCLPGYY 152
+ + C+C H N S + + +++ C+ C+ NT+G++CE C GY+
Sbjct: 349 GTANTCIPSISSIGNCECFGHSNRCSYIDLLNTVI--CVSCKHNTRGQHCELCRLGYF 404
Score = 68 (29.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 19/60 (31%), Positives = 23/60 (38%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVY 375
C C TGP C E + N + CD L +H +G T V RC C Y
Sbjct: 438 CECKTGTTGPKCDECLPGNSWYYGCQPNVCDNEL--LHCQNGGTCQNNV---RCACPDAY 492
Score = 61 (26.5 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 305 CPENRTCINN-QCVCPPRRTGPDCQEEIC 332
C TC NN +C CP TG C++ C
Sbjct: 474 CQNGGTCQNNVRCACPDAYTGILCEKLRC 502
>UNIPROTKB|F1MPE9 [details] [associations]
symbol:NOTCH2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072602 "interleukin-4 secretion" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060413 "atrial septum morphogenesis" evidence=IEA] [GO:0046849
"bone remodeling" evidence=IEA] [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0016049 "cell growth" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003184 "pulmonary valve morphogenesis"
evidence=IEA] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0002011 "morphogenesis of an epithelial
sheet" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0005634 GO:GO:0008285
GO:GO:0009986 GO:GO:0030154 GO:GO:0005887 GO:GO:0002437
GO:GO:0016049 GO:GO:0046849 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219
GO:GO:0005509 GO:GO:0007050 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0043065 GO:GO:0009887 GO:GO:0030326 GO:GO:0007368
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0006959 GO:GO:0050793
GO:GO:0046579 GeneTree:ENSGT00700000104305 GO:GO:0002011
GO:GO:0072602 SUPFAM:SSF90193 KO:K02599 InterPro:IPR024600
Pfam:PF11936 CTD:4853 InterPro:IPR022336 PRINTS:PR01985 OMA:VCMPGFT
EMBL:DAAA02007351 EMBL:DAAA02007352 EMBL:DAAA02007353
IPI:IPI01002388 RefSeq:XP_002686160.2 Ensembl:ENSBTAT00000010400
GeneID:513730 KEGG:bta:513730 Uniprot:F1MPE9
Length = 2471
Score = 153 (58.9 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 49/152 (32%), Positives = 64/152 (42%)
Query: 36 NKCIYGYCKGP-PDYSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGD 91
N C++G C G Y C C+ GW G++C V+ CL N C +G G CD G
Sbjct: 727 NPCVHGNCTGGLTGYKCLCDAGWVGINCEVDKNECLSN---PCQNG-GTCDNL---VNGY 779
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLP 149
C C+ G G Q +C N N G C D ++G C C GKNC+ L
Sbjct: 780 RCT-CKKGFKGY-NCQVNIDECASNPCLNQ--GTCLDDVSGYTCHCVLPYTGKNCQTVLA 835
Query: 150 GYYGDPTDG-GTCYY--QCMARGMLTGPGPQG 178
+P + G C + L PG QG
Sbjct: 836 PCSPNPCENAGVCKEAPNFESYSCLCAPGWQG 867
Score = 151 (58.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 84/327 (25%), Positives = 120/327 (36%)
Query: 41 GYCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAG 99
G C P Y CQC G+TG C + S CV+G G C + D+T C C G
Sbjct: 196 GTCLNLPGSYQCQCPQGFTGQHCDSPYVPCAPSPCVNG-GTCRQTGDFTF--ECS-CLPG 251
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCERCLPGYYGDPT- 156
G T + DC +H GVC D + T C C G+ C + P
Sbjct: 252 FEG-VTCERNID--DCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNA 308
Query: 157 --DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAP 214
+GGTC + G + G G + TP C+ +
Sbjct: 309 CQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGK 368
Query: 215 ADIILLRLQPDINVPCNENAVYIYDGLP-DFVTSVGGTHQSTTLGVFCTED-----MHRG 268
A ++ I+ PC++ A+ + L ++ + ++ G CTED M
Sbjct: 369 AGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYK----GSDCTEDVDECAMANS 424
Query: 269 YEVLEAKSGVMT---IHYKQGKPSEGFNATYQIFSC-PDKCPENRTCINN----QCVCPP 320
A V T H + K G I C D C + TC++ C+C P
Sbjct: 425 NPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCKNDATCLDKIGGFTCLCMP 484
Query: 321 RRTGPDCQEEICPNECHE--FLNHGTC 345
G C+ EI NEC +N+G C
Sbjct: 485 GFKGVHCELEI--NECQSNPCVNNGQC 509
Score = 135 (52.6 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 88/355 (24%), Positives = 135/355 (38%)
Query: 34 CYNK-CI-YGYCKGPP-DYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGICD-E 83
C +K C+ +G C Y C+C G++G+DC + CL C N +CV G+
Sbjct: 877 CVSKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCVDGVNTFSCL 936
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCD-CNSHGNSVLGVCDSITGECICQDN---- 138
C TGD CQ + N E C+ C+ + NS C + C++N
Sbjct: 937 CLPGFTGDKCQ-----TDMNECLSEPCKNGGTCSDYVNSYTCKCPAGFDGVHCENNIDEC 991
Query: 139 TQGK--NCERCLPGYYGD----PTD--GGTCYYQ---CMARGMLT-GPGPQGLGSGLAER 186
T+ N C+ G P G C ++ C + L G GLG+
Sbjct: 992 TESSCFNGGTCIDGINSFSCLCPVGFTGSFCLHEINECNSHPCLNEGVCVDGLGTYRCIC 1051
Query: 187 N-AWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFV 245
+ GK+ C ++ +L S S ++ + + C Y +P
Sbjct: 1052 PLGYTGKN-----CQTLV--NLCSRSPCKNKGTCIQDKAESRCLCPSGWAGAYCDVPSVS 1104
Query: 246 TSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATY---QIFSCP 302
V +H+ + C H G + S H+ Q P G+ +Y Q+ C
Sbjct: 1105 CEVAASHRGVPVDRLC---QHSGVCISAGNS-----HHCQC-PL-GYTGSYCEDQLDECS 1154
Query: 303 DK-CPENRTC---INN-QCVCPPRRTGPDCQEEI--CPNE-CHEFLNHGTC-DLL 348
C TC I +C C P G +C+ E+ C N+ C N GTC DL+
Sbjct: 1155 SNPCQHGATCRDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQ---NGGTCIDLV 1206
Score = 134 (52.2 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 45/150 (30%), Positives = 56/150 (37%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KCI P Y CQC G+TGV C N + C HG +C D
Sbjct: 541 CLNGAKCI----DHPNGYECQCATGFTGVLCEENIDNCDPDPCHHG-----QCQDGIDSY 591
Query: 92 HCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCL 148
C C G G + + C C + G + D + G +C CQ T G NCE
Sbjct: 592 TC-ICNPGYMGAICSDQIDECYSSPCLNEGRCI----DLVNGYQCNCQPGTSGVNCEINF 646
Query: 149 PGYYGDPTDGGTCY-----YQCMARGMLTG 173
+P G C Y C+ TG
Sbjct: 647 DDCASNPCVHGVCMDGVNRYSCVCSPGFTG 676
Score = 126 (49.4 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 41 GYCKGPPD---YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
G CK P+ YSC C GW G C+++ C + HG+ CH+ T G + C
Sbjct: 846 GVCKEAPNFESYSCLCAPGWQGQRCTIDIDECVSKPCMNHGL-----CHN-TQGSYMCEC 899
Query: 97 RAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
G G ++ C C + G+ V GV T C+C G C+ + +
Sbjct: 900 PPGFSGMDCEEDIDDCLANPCQNGGSCVDGVN---TFSCLCLPGFTGDKCQTDMNECLSE 956
Query: 155 PT-DGGTC 161
P +GGTC
Sbjct: 957 PCKNGGTC 964
Score = 121 (47.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 48/159 (30%), Positives = 63/159 (39%)
Query: 16 DALSRCTVLLLYIFNASLCY---NKCIYGYCKGPP-------DYSCQCELGWTGVDCSVN 65
D ++ + L L F C N+C+ CK Y+C+C G+ GV C N
Sbjct: 928 DGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCPAGFDGVHCENN 987
Query: 66 CLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGV 125
S+C +G G C D C C G G+ E +CNSH GV
Sbjct: 988 IDECTESSCFNG-GTCI---DGINSFSC-LCPVGFTGSFCLHE---INECNSHPCLNEGV 1039
Query: 126 C-DSI-TGECICQDNTQGKNCERCLPGYYGDPTDG-GTC 161
C D + T CIC GKNC+ + P GTC
Sbjct: 1040 CVDGLGTYRCICPLGYTGKNCQTLVNLCSRSPCKNKGTC 1078
Score = 112 (44.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 42/146 (28%), Positives = 60/146 (41%)
Query: 34 CYNK-CIY-GYCKGPPD-YSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDW 87
CY+ C+ G C + Y C C+ G +GV+C +N C N CVHG+ C D
Sbjct: 611 CYSSPCLNEGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASN---PCVHGV-----CMDG 662
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNC-- 144
C C G G + +C N + D + G CIC + +C
Sbjct: 663 VNRYSC-VCSPGFTGQRCNID-IDECASNPCRKGATCIND-VNGFRCICPEGPHHPSCYS 719
Query: 145 --ERCL--PGYYGDPTDGGTCYYQCM 166
CL P +G+ T GG Y+C+
Sbjct: 720 QVNECLSNPCVHGNCT-GGLTGYKCL 744
Score = 103 (41.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 43/162 (26%), Positives = 64/162 (39%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
Y C C++G+TG C C +H C +G C C C AG G +
Sbjct: 129 YECTCQVGFTGKLCQWTDACLSHP-CANG----STCTTMANQFSCT-CLAGFTGQKCETD 182
Query: 109 GCRKCD----CNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYGDPTDGGTCY- 162
+CD C HG + L + S +C C G++C+ +P +GGTC
Sbjct: 183 -VNECDIPGQCQ-HGGTCLNLPGSY--QCQCPQGFTGQHCDSPYVPCAPSPCVNGGTCRQ 238
Query: 163 -----YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSREC 199
++C PG +G+ ERN D P+ +C
Sbjct: 239 TGDFTFECSCL-----PGFEGV---TCERNI---DDCPNHKC 269
Score = 94 (38.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 39/139 (28%), Positives = 54/139 (38%)
Query: 50 SCQCELGWTGVDC--SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+C+C G+TG DC S C C++G CH + + C+ G G
Sbjct: 89 TCRCAPGFTGEDCQHSTTHPCFVSHPCLNG----GTCHVLSRDTYECTCQVGFTGKL--- 141
Query: 108 EGCRKCD-CNSHGNSVLGVCDSITGE--CICQDNTQGKNCE----RC-LPGYYGDPTDGG 159
C+ D C SH + C ++ + C C G+ CE C +PG GG
Sbjct: 142 --CQWTDACLSHPCANGSTCTTMANQFSCTCLAGFTGQKCETDVNECDIPGQC---QHGG 196
Query: 160 TCY-----YQCMARGMLTG 173
TC YQC TG
Sbjct: 197 TCLNLPGSYQCQCPQGFTG 215
Score = 87 (35.7 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 24/64 (37%), Positives = 30/64 (46%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQEEI--C-PNECHEFLN 341
+G T I C K C + C N Q C CPP +G DC+E+I C N C N
Sbjct: 866 QGQRCTIDIDECVSKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQ---N 922
Query: 342 HGTC 345
G+C
Sbjct: 923 GGSC 926
Score = 67 (28.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 21/67 (31%), Positives = 28/67 (41%)
Query: 287 KPSEGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNECHE 338
K +G+N I C C TC+++ C C TG +CQ + C PN C
Sbjct: 785 KGFKGYNCQVNIDECASNPCLNQGTCLDDVSGYTCHCVLPYTGKNCQTVLAPCSPNPCE- 843
Query: 339 FLNHGTC 345
N G C
Sbjct: 844 --NAGVC 848
Score = 62 (26.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 21/62 (33%), Positives = 26/62 (41%)
Query: 291 GFNATYQIFSC-PDKCPENRTCIN--N--QCVCPPRRTGPDCQEEICPNEC--HEFLNHG 343
G N C + C TC N N +C C G +CQ I +EC + LN G
Sbjct: 751 GINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNI--DECASNPCLNQG 808
Query: 344 TC 345
TC
Sbjct: 809 TC 810
Score = 57 (25.1 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 316 CVCPPRRTGPDCQE--EICPN-ECHEFLNHGTC 345
CVC TG C+ ++CP C LN GTC
Sbjct: 1290 CVCRSTFTGRHCETFVDVCPQMPC---LNGGTC 1319
Score = 56 (24.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCR 372
+C+C G +C E+ NEC + N GTCD L+ G Y RCTC+
Sbjct: 742 KCLCDAGWVGINC--EVDKNECLSNPCQNGGTCDNLVNG----------Y-----RCTCK 784
Query: 373 Q 373
+
Sbjct: 785 K 785
Score = 56 (24.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/67 (29%), Positives = 26/67 (38%)
Query: 288 PSEGFNATYQIFSC-PDKCPENRTCIN--N----QCVCPPRRTGPDCQEEICPNEC--HE 338
P G N + C P+ C C N C+C P G C +I +EC
Sbjct: 824 PYTGKNCQTVLAPCSPNPCENAGVCKEAPNFESYSCLCAPGWQGQRCTIDI--DECVSKP 881
Query: 339 FLNHGTC 345
+NHG C
Sbjct: 882 CMNHGLC 888
Score = 46 (21.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 301 CPDK-CPENRTCI--NNQ-----CVCPPRRTGPDCQEEICPNEC 336
CP C TC +N C CPP +G CQ +C
Sbjct: 1308 CPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQSSCGQVKC 1351
>UNIPROTKB|F1NZ70 [details] [associations]
symbol:Gga.54229 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001047 "core promoter binding" evidence=IEA]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0002040 "sprouting
angiogenesis" evidence=IEA] [GO:0002193 "MAML1-RBP-Jkappa- ICN1
complex" evidence=IEA] [GO:0002437 "inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0003160 "endocardium
morphogenesis" evidence=IEA] [GO:0003162 "atrioventricular node
development" evidence=IEA] [GO:0003169 "coronary vein
morphogenesis" evidence=IEA] [GO:0003180 "aortic valve
morphogenesis" evidence=IEA] [GO:0003181 "atrioventricular valve
morphogenesis" evidence=IEA] [GO:0003184 "pulmonary valve
morphogenesis" evidence=IEA] [GO:0003192 "mitral valve formation"
evidence=IEA] [GO:0003198 "epithelial to mesenchymal transition
involved in endocardial cushion formation" evidence=IEA]
[GO:0003213 "cardiac right atrium morphogenesis" evidence=IEA]
[GO:0003214 "cardiac left ventricle morphogenesis" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0003222 "ventricular trabecula myocardium morphogenesis"
evidence=IEA] [GO:0003241 "growth involved in heart morphogenesis"
evidence=IEA] [GO:0003256 "regulation of transcription from RNA
polymerase II promoter involved in myocardial precursor cell
differentiation" evidence=IEA] [GO:0003270 "Notch signaling pathway
involved in regulation of secondary heart field cardioblast
proliferation" evidence=IEA] [GO:0003273 "cell migration involved
in endocardial cushion formation" evidence=IEA] [GO:0003344
"pericardium morphogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004857 "enzyme inhibitor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007221
"positive regulation of transcription of Notch receptor target"
evidence=IEA] [GO:0007386 "compartment pattern specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007440
"foregut morphogenesis" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IEA] [GO:0009912 "auditory receptor cell fate
commitment" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0010001 "glial cell differentiation" evidence=IEA] [GO:0010718
"positive regulation of epithelial to mesenchymal transition"
evidence=IEA] [GO:0010812 "negative regulation of cell-substrate
adhesion" evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IEA] [GO:0014807 "regulation of
somitogenesis" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030279 "negative regulation of ossification" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0031069 "hair
follicle morphogenesis" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032495 "response to muramyl dipeptide"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0042640 "anagen" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045618 "positive regulation of keratinocyte differentiation"
evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045955 "negative
regulation of calcium ion-dependent exocytosis" evidence=IEA]
[GO:0046427 "positive regulation of JAK-STAT cascade" evidence=IEA]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0048711 "positive regulation of
astrocyte differentiation" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA] [GO:0060045 "positive regulation of
cardiac muscle cell proliferation" evidence=IEA] [GO:0060253
"negative regulation of glial cell proliferation" evidence=IEA]
[GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
[GO:0060528 "secretory columnal luminar epithelial cell
differentiation involved in prostate glandular acinus development"
evidence=IEA] [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060768 "regulation of epithelial cell
proliferation involved in prostate gland development" evidence=IEA]
[GO:0060842 "arterial endothelial cell differentiation"
evidence=IEA] [GO:0060843 "venous endothelial cell differentiation"
evidence=IEA] [GO:0060948 "cardiac vascular smooth muscle cell
development" evidence=IEA] [GO:0060956 "endocardial cell
differentiation" evidence=IEA] [GO:0060979 "vasculogenesis involved
in coronary vascular morphogenesis" evidence=IEA] [GO:0060982
"coronary artery morphogenesis" evidence=IEA] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0070986 "left/right axis
specification" evidence=IEA] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEA] [GO:0072017
"distal tubule development" evidence=IEA] [GO:0072044 "collecting
duct development" evidence=IEA] [GO:0072144 "glomerular mesangial
cell development" evidence=IEA] [GO:0072602 "interleukin-4
secretion" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0097150
"neuronal stem cell maintenance" evidence=IEA] [GO:1901201
"regulation of extracellular matrix assembly" evidence=IEA]
[GO:2000737 "negative regulation of stem cell differentiation"
evidence=IEA] [GO:2000811 "negative regulation of anoikis"
evidence=IEA] [GO:2000974 "negative regulation of pro-B cell
differentiation" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0005634 GO:GO:0030154 GO:GO:0008284
GO:GO:0004857 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122
GO:GO:0030513 GO:GO:0010718 PROSITE:PS01186 GO:GO:0001047
GO:GO:0046427 PROSITE:PS00010 GO:GO:0010812 GO:GO:0045668
GO:GO:2000811 GO:GO:0010832 GO:GO:0045662 GO:GO:0030514
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 GO:GO:2000974
GO:GO:2000737 GO:GO:0061419 GO:GO:0002193 InterPro:IPR024600
Pfam:PF11936 EMBL:AADN02026409 EMBL:AADN02026410 EMBL:AADN02026411
EMBL:AADN02026412 EMBL:AADN02026413 EMBL:AADN02026414
IPI:IPI00584675 Ensembl:ENSGALT00000003754 Uniprot:F1NZ70
Length = 2548
Score = 188 (71.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 96/341 (28%), Positives = 132/341 (38%)
Query: 36 NKCIYGYCK-GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
N CI+G C G Y C C+ GW+G +C +N + C++G C D T+G C
Sbjct: 719 NPCIHGRCHDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNG----GTCKDMTSGYICT 774
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYY 152
CR G + Q +C N N G C D + G C C G CE L
Sbjct: 775 -CREG-FSGPNCQTNINECASNPCLNQ--GTCIDDVAGYTCNCLLPYTGATCEDVLAPCA 830
Query: 153 GDPT-DGGTC-----Y--YQCMAR-GMLTGPGPQ-GLGSGLAE--RNAWEGKDTP-SREC 199
G P +GG C Y + C G G + + + RN ++T S C
Sbjct: 831 GGPCKNGGECRESEDYKRFSCSCPPGWQAGQTCEIDINECVKSPCRNGATCQNTNGSYRC 890
Query: 200 LWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTS-VGGTHQSTTLG 258
L +G + N D QP+ PC+ N DG+ F + G G
Sbjct: 891 LCRVGFA-GRNCDTDID----DCQPN---PCH-NGGSCSDGIGTFFCECLAGFR-----G 936
Query: 259 VFCTEDMHRGYEVLEAKSGVMTIH----YKQGKPSEGFNATYQIFSCPD----KCPENRT 310
+ C ED++ K+G Y PS GF+ + + PD C T
Sbjct: 937 LKCEEDINECASN-PCKNGANCTDCVNSYTCTCPS-GFSGIHCENNTPDCTESSCFNGGT 994
Query: 311 CINN----QCVCPPRRTGPDCQEEICPNECHE--FLNHGTC 345
C++ C+CP TG C+ I NEC LN GTC
Sbjct: 995 CVDGINTFTCLCPSGFTGSYCEHNI--NECDSKPCLNGGTC 1033
Score = 128 (50.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 48/152 (31%), Positives = 64/152 (42%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC 93
N C YG C + Y C CE G+TG C++N C ++ C +G G C D G C
Sbjct: 644 NPCDYGKCIDKINGYECTCEPGYTGRMCNINIDECASNP-CHNG-GTCK---DGINGFTC 698
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGY 151
C G + E +CNS+ + G C D + G C C G NC+
Sbjct: 699 -LCPEGFHDPKCLSE---VNECNSNP-CIHGRCHDGLNGYRCDCDPGWSGTNCDINNNEC 753
Query: 152 YGDPT-DGGTCY-----YQCMARGMLTGPGPQ 177
+P +GGTC Y C R +GP Q
Sbjct: 754 ESNPCMNGGTCKDMTSGYICTCREGFSGPNCQ 785
Score = 126 (49.4 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 41/144 (28%), Positives = 54/144 (37%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
KC+ GP YSC+C G++GV C ++ N C +G C D C C
Sbjct: 538 KCV----DGPNTYSCECTEGFSGVHCEIDIDECNPDPCHYGT-----CKDSIAAFTC-LC 587
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGD 154
+ G G+ +C N G C C+C T G NCE L +
Sbjct: 588 QPGYTGHRC-DININECQSQPCRNG--GTCQDRDNAYNCLCLKGTTGPNCEINLDDCASN 644
Query: 155 PTDGGTCY-----YQCMARGMLTG 173
P D G C Y+C TG
Sbjct: 645 PCDYGKCIDKINGYECTCEPGYTG 668
Score = 117 (46.2 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 45/140 (32%), Positives = 63/140 (45%)
Query: 31 ASLCYNKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTT 89
A LC N G C + + C+C+ G+TG C + + C +G C D+
Sbjct: 1110 AHLCRNS---GLCVDSGNTHFCRCQAGYTGSYCEEQVDECSPNPCQNGA----TCTDYLG 1162
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCE-- 145
G C+ C AG +G ++E +C SH G C D I T +C C TQG +CE
Sbjct: 1163 GYSCE-CVAGYHGVNCSEE---INECLSHPCQNGGTCIDLINTYKCSCPRGTQGVHCEIN 1218
Query: 146 --RCLPGYYGDP-TDGGTCY 162
C P + DP T G C+
Sbjct: 1219 VDDCSPFF--DPVTLGPKCF 1236
Score = 116 (45.9 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 43/154 (27%), Positives = 63/154 (40%)
Query: 36 NKCIYGYCKGPPD-------YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGIC-DECHDW 87
N+C CK + Y+C C G++G+ C N S+C +G G C D + +
Sbjct: 944 NECASNPCKNGANCTDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNG-GTCVDGINTF 1002
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCE 145
T C C +G G+ + +CD N G C DS T +C C G NC+
Sbjct: 1003 T----C-LCPSGFTGSYC-EHNINECDSKPCLNG--GTCQDSYGTYKCTCPQGYTGLNCQ 1054
Query: 146 RCLPGYYGDPT-DGGTCY-----YQCMARGMLTG 173
+ P +GG C+ Y+C TG
Sbjct: 1055 NLVRWCDSSPCKNGGKCWQTNNLYRCECNSGWTG 1088
Score = 114 (45.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 33/117 (28%), Positives = 53/117 (45%)
Query: 48 DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+Y C+C GW+G C C ++ C +G G +C + C+ C AG +G A +
Sbjct: 120 EYKCRCPPGWSGKTCQQADPCASNP-CANG-G---QCVPFEAHYICR-CTAGFHG-ANCK 172
Query: 108 EGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT-DGGTC 161
+ +C+ + G C + G +C C+ G+NCE P +GGTC
Sbjct: 173 QDVNECNISPPVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTC 229
Score = 112 (44.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 40/141 (28%), Positives = 53/141 (37%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQ 107
Y+C C GWTG DCS N + C G CHD +C+ C G G
Sbjct: 315 YNCVCVNGWTGEDCSENIDDCAMAACFQGA----TCHDRVASFYCE-CPHGRTGLLCHLD 369
Query: 108 EGCRKCDCNSHGNSVLGVCDS--ITGE--CICQDNTQGKNC----ERCLPGYYGDPTD-G 158
+ C CN N CD+ + G+ C C G C + C G +P +
Sbjct: 370 DACISNPCNEGSN-----CDTNPVNGKAICTCPSGYMGPACNQDVDECSLG--ANPCEHA 422
Query: 159 GTCY-----YQCMARGMLTGP 174
G C +QC +GP
Sbjct: 423 GKCINTQGSFQCQCLQGYSGP 443
Score = 112 (44.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 36/132 (27%), Positives = 52/132 (39%)
Query: 48 DYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT 106
++ C C G+ GV C +N C + S C+H D+ +++ HC+ C G +
Sbjct: 469 EFQCICMPGYEGVYCEINTDECAS-SPCLHNGNCLDKINEF----HCE-CPTG-FNGLLC 521
Query: 107 QEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
Q +C N V T C C + G +CE + DP GTC
Sbjct: 522 QFDIDECASTPFKNGAKCVDGPNTYSCECTEGFSGVHCEIDIDECNPDPCHYGTCKDSIA 581
Query: 167 ARGMLTGPGPQG 178
A L PG G
Sbjct: 582 AFTCLCQPGYTG 593
Score = 110 (43.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 34/121 (28%), Positives = 48/121 (39%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDW----TTGD-HCQYCRAGSYGN 103
Y C+C GWTG+ C V + + GI + C + +G+ H C+AG Y
Sbjct: 1078 YRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDSGNTHFCRCQAG-YTG 1136
Query: 104 ATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT-DGGT 160
+ +E +C N N C G C C G NC + P +GGT
Sbjct: 1137 SYCEEQVDECSPNPCQNGA--TCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGT 1194
Query: 161 C 161
C
Sbjct: 1195 C 1195
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 43/138 (31%), Positives = 55/138 (39%)
Query: 26 LYI-FNASLCYNKCIYGYCK--GPPDYSCQCELGWTGVDCSVN---CL---CNNHSTCVH 76
LY+ N S C N G C+ G Y C C G+TG +C N C C N TCV
Sbjct: 214 LYVPCNPSPCQNG---GTCRQTGDTTYDCTCLPGFTGQNCEENIDDCPGNNCRNGGTCVD 270
Query: 77 GIGICD-ECH-DWTTGDHC--QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
G+ + +C +WT G +C NA G C N+HG + TGE
Sbjct: 271 GVNTYNCQCPPEWT-GQYCTEDVDECQLMPNACQNGGT--CH-NNHGGYNCVCVNGWTGE 326
Query: 133 CICQDNTQGKNCERCLPG 150
C +N C G
Sbjct: 327 D-CSENIDDCAMAACFQG 343
Score = 105 (42.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 40/129 (31%), Positives = 53/129 (41%)
Query: 36 NKCIYG-YC-KGPPDYSCQCELGWTGVDCSVN---C-----LCNNHSTCV--HGIGICDE 83
N C G C G Y+CQC WTG C+ + C C N TC HG C
Sbjct: 260 NNCRNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNNHGGYNCVC 319
Query: 84 CHDWTTGDHCQY----CR-AGSYGNATTQEGCRK--CDCNSHGNSVLGVCDSITGECICQ 136
+ WT G+ C C A + AT + C+C HG + L +C + CI
Sbjct: 320 VNGWT-GEDCSENIDDCAMAACFQGATCHDRVASFYCEC-PHGRTGL-LCH-LDDACISN 375
Query: 137 DNTQGKNCE 145
+G NC+
Sbjct: 376 PCNEGSNCD 384
Score = 96 (38.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 41/146 (28%), Positives = 60/146 (41%)
Query: 32 SLCYNKCIY-GYCKGPP-DYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIG---- 79
SL N C + G C + CQC G++G C ++ CL C N +TC+ IG
Sbjct: 413 SLGANPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQC 472
Query: 80 ICDECHDWT----TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECIC 135
IC ++ D C GN + C+C + N +L C EC
Sbjct: 473 ICMPGYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGLL--CQFDIDECA- 529
Query: 136 QDNTQGKNCERCLPG---YYGDPTDG 158
+T KN +C+ G Y + T+G
Sbjct: 530 --STPFKNGAKCVDGPNTYSCECTEG 553
Score = 95 (38.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 45/157 (28%), Positives = 59/157 (37%)
Query: 31 ASLCYNK--CIYGYCKGPPDYSCQCELGWTGVDCSV---NCLCNNHSTCVHGIGICDECH 85
+S C N CI DY+C C LG+T C N NN C +G G CD
Sbjct: 61 SSPCKNAGTCIPLLRGSTADYTCVCRLGFTDELCLTPLDNACLNN--PCRNG-GTCDLV- 116
Query: 86 DWTTGDHCQYCRAGSYGNATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
T ++ C G G Q + C C + G V I C C G NC
Sbjct: 117 --TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYI---CRCTAGFHGANC 171
Query: 145 ERCLPGYYGDPT---DGGTCY-----YQCMARGMLTG 173
++ + P +GG+C YQC + TG
Sbjct: 172 KQDVNECNISPPVCKNGGSCTNEVGTYQCSCKPAYTG 208
Score = 92 (37.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 24/65 (36%), Positives = 29/65 (44%)
Query: 291 GFNATYQIFSCP-DKCPENRTCINN----QCVCPPRRTGPDCQEEI--C---PNECHEFL 340
G N I CP + C TC++ C CPP TG C E++ C PN C
Sbjct: 247 GQNCEENIDDCPGNNCRNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQLMPNACQ--- 303
Query: 341 NHGTC 345
N GTC
Sbjct: 304 NGGTC 308
Score = 87 (35.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 38/132 (28%), Positives = 51/132 (38%)
Query: 230 CNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPS 289
CN +Y +P V Q + C G L SG H+ + +
Sbjct: 1082 CNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNS---G---LCVDSG--NTHFCRCQA- 1132
Query: 290 EGFNATY---QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEF 339
G+ +Y Q+ C P+ C TC + C C G +C EEI NEC H
Sbjct: 1133 -GYTGSYCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEI--NECLSHPC 1189
Query: 340 LNHGTC-DLLLT 350
N GTC DL+ T
Sbjct: 1190 QNGGTCIDLINT 1201
Score = 84 (34.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/69 (36%), Positives = 29/69 (42%)
Query: 287 KPS-EGFNATYQIFSC-PDKCPENRTCINN-----QCVCPPRRTGPDCQEEI--CP-NEC 336
KP+ G N + C P C TC C C P TG +C+E I CP N C
Sbjct: 203 KPAYTGQNCEHLYVPCNPSPCQNGGTCRQTGDTTYDCTCLPGFTGQNCEENIDDCPGNNC 262
Query: 337 HEFLNHGTC 345
N GTC
Sbjct: 263 R---NGGTC 268
Score = 76 (31.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 305 CPENRTCIN----NQCVCPPRRTGPDCQ---EEIC-PNECHEFLNHGTCDLL 348
C TCI+ ++CVC TGP+CQ C N C+ N GTC+ L
Sbjct: 1354 CLNGGTCISMHKSSKCVCAAAFTGPECQYPASSPCISNPCY---NGGTCEFL 1402
Score = 73 (30.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 27/92 (29%), Positives = 33/92 (35%)
Query: 277 GVMTIHYKQGKPSEGFNATYQIFSC---PDKCPENRTCINNQ----CVCPPRRTGPDCQE 329
GV T + + G T + C P+ C TC NN CVC TG DC E
Sbjct: 271 GVNTYNCQCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSE 330
Query: 330 EICPNECHEFLNHGTCDLLLTGVHIT--HGRT 359
I TC + + HGRT
Sbjct: 331 NIDDCAMAACFQGATCHDRVASFYCECPHGRT 362
Score = 68 (29.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 31/98 (31%), Positives = 41/98 (41%)
Query: 288 PSEGFNATYQIFSCPD----KCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHE- 338
PS GF+ + + PD C TC++ C+CP TG C+ I NEC
Sbjct: 969 PS-GFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPSGFTGSYCEHNI--NECDSK 1025
Query: 339 -FLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVY 375
LN GTC ++G Y +CTC Q Y
Sbjct: 1026 PCLNGGTCQ-------DSYGT---Y-----KCTCPQGY 1048
Score = 68 (29.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/66 (30%), Positives = 26/66 (39%)
Query: 287 KPSEGFNATYQIFSCPDKCPENRTCINN----QCVCPPRRTGPDCQ---EEICPNECHEF 339
K + G N + C + CI+ +C C P TG C +E N CH
Sbjct: 627 KGTTGPNCEINLDDCASNPCDYGKCIDKINGYECTCEPGYTGRMCNINIDECASNPCH-- 684
Query: 340 LNHGTC 345
N GTC
Sbjct: 685 -NGGTC 689
Score = 63 (27.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 29/103 (28%), Positives = 40/103 (38%)
Query: 258 GVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPS-------EGFNATYQIFSCP-DKCPENR 309
G +CTED+ + A T H G + G + + I C C +
Sbjct: 285 GQYCTEDVDECQLMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFQGA 344
Query: 310 TCINN----QCVCPPRRTGPDCQ-EEIC-PNECHEFLNHGTCD 346
TC + C CP RTG C ++ C N C+E N CD
Sbjct: 345 TCHDRVASFYCECPHGRTGLLCHLDDACISNPCNEGSN---CD 384
Score = 61 (26.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 19/52 (36%), Positives = 22/52 (42%)
Query: 305 CPENRTC---INN-QCVCPPRRTGPDCQEEICPNECHEF-LNHGTCDLLLTG 351
C TC IN C+CP P C E+ NEC+ HG C L G
Sbjct: 683 CHNGGTCKDGINGFTCLCPEGFHDPKCLSEV--NECNSNPCIHGRCHDGLNG 732
Score = 59 (25.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
+C C P +G +C +I NEC +N GTC + +G
Sbjct: 734 RCDCDPGWSGTNC--DINNNECESNPCMNGGTCKDMTSG 770
Score = 56 (24.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 305 CPENRTCINNQ----CVCPPRRTGPDCQEEI--C-PNECHEFLNHGTCDLLLTG 351
C + C+++ C C TG C+E++ C PN C N TC L G
Sbjct: 1113 CRNSGLCVDSGNTHFCRCQAGYTGSYCEEQVDECSPNPCQ---NGATCTDYLGG 1163
>UNIPROTKB|F1MD77 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:DAAA02043571 EMBL:DAAA02043567
EMBL:DAAA02043568 EMBL:DAAA02043569 EMBL:DAAA02043570
IPI:IPI01018593 UniGene:Bt.19081 Ensembl:ENSBTAT00000015881
Uniprot:F1MD77
Length = 1608
Score = 184 (69.8 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 38/94 (40%), Positives = 52/94 (55%)
Query: 62 CSVNCLCN---NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
CS C C+ + ST G C C GD C C+ G Y ++ T+ GCR C CN
Sbjct: 394 CSP-CHCSPVGSLSTQCDSYGRCS-CKPGVMGDKCDRCQPG-Y-HSLTEAGCRPCSCNPS 449
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
G+ + C+ TG C+C+DN +G NCERC PG++
Sbjct: 450 GS--IDECNIETGRCVCKDNVEGFNCERCKPGFF 481
Score = 179 (68.1 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 51/165 (30%), Positives = 76/165 (46%)
Query: 16 DALSRCTVL----LLYIFNASLCY-NKCIYGYCKGP--PDYSCQCELGWTGVDCSVNCLC 68
+A+ C L L I+N + Y ++C G+ P P+ + +C DC+
Sbjct: 836 NAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCR----ACDCNPYGTV 891
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
S+C G C EC TG C C G Y N + +GC +CDC++ G S G CD
Sbjct: 892 KQQSSCNPVTGQC-ECLPHVTGRDCGACDPGFY-NLQSGQGCERCDCHALG-STNGQCDV 948
Query: 129 ITGECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCMARGMLT 172
+G+C CQ G++CE C ++G +G C C G L+
Sbjct: 949 HSGQCECQPGITGQHCEHCEVNHFGFGPEGCKPC--DCHPEGSLS 991
Score = 177 (67.4 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 38/109 (34%), Positives = 56/109 (51%)
Query: 58 TGVDCSVNCLCNNHSTCV-----HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG--- 109
T +DC C C S+C + +C C TTG C+ C G +G+ G
Sbjct: 765 TSLDCQP-CPCPGGSSCAVVPKTQEV-VCTNCPTGTTGRRCELCDDGHFGDPLGSNGPVR 822
Query: 110 -CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
CR C CN + + + +G C+ +TGEC+ C NT G C+RC G++G+P
Sbjct: 823 LCRLCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNP 871
Score = 171 (65.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 46/131 (35%), Positives = 61/131 (46%)
Query: 29 FNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHS-TCVHGIGICDECHDW 87
+ C C+ GY + P LG C V C CN HS TC G+C+ C D
Sbjct: 695 YGGQFC-EVCLSGYRRETPS------LGPYS-PC-VLCTCNGHSETCDPESGVCN-CRDN 744
Query: 88 TTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNC 144
T G +C+ C G YG++T T C+ C C G+S V + C C T G+ C
Sbjct: 745 TAGPNCEKCSDGYYGDSTAGTSLDCQPCPCPG-GSSCAVVPKTQEVVCTNCPTGTTGRRC 803
Query: 145 ERCLPGYYGDP 155
E C G++GDP
Sbjct: 804 ELCDDGHFGDP 814
Score = 168 (64.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 37/116 (31%), Positives = 52/116 (44%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNSH 118
C+ N N C G C +C T G +C C+ G +GN + CR CDCN +
Sbjct: 829 CNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACDCNPY 888
Query: 119 GN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
G C+ +TG+C C + G++C C PG+Y + G C A G G
Sbjct: 889 GTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG 944
Score = 163 (62.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 38/113 (33%), Positives = 53/113 (46%)
Query: 41 GYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC-VHGIGICDECHDWTTGDHCQYCRAG 99
G C P Y+ Q G DC + L + + C VH G C EC TG HC++C
Sbjct: 916 GACD-PGFYNLQSGQGCERCDC--HALGSTNGQCDVHS-GQC-ECQPGITGQHCEHCEVN 970
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G EGC+ CDC+ G+ L D G C C++ G C++C Y+
Sbjct: 971 HFGFGP--EGCKPCDCHPEGSLSLQCKDD--GRCECREGFVGNRCDQCEENYF 1019
Score = 158 (60.7 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 32/73 (43%), Positives = 38/73 (52%)
Query: 90 GDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C+ C +G Y T G C C CN H + CD +G C C+DNT G NCE
Sbjct: 697 GQFCEVCLSG-YRRETPSLGPYSPCVLCTCNGHSET----CDPESGVCNCRDNTAGPNCE 751
Query: 146 RCLPGYYGDPTDG 158
+C GYYGD T G
Sbjct: 752 KCSDGYYGDSTAG 764
Score = 49 (22.3 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 312 INNQCVCPPRRTGPDC 327
+ QC C P TG DC
Sbjct: 900 VTGQCECLPHVTGRDC 915
Score = 46 (21.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 19/66 (28%), Positives = 26/66 (39%)
Query: 313 NNQCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTGVHITHGRTLHYQVDLIRCT 370
+ QC C P TG C+ C F G CD H +L + D RC
Sbjct: 950 SGQCECQPGITGQHCEH--CEVNHFGFGPEGCKPCDC-----HPEGSLSLQCKDDG-RCE 1001
Query: 371 CRQVYL 376
CR+ ++
Sbjct: 1002 CREGFV 1007
Score = 42 (19.8 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 283 YKQGKPSEGFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQE 329
Y++ PS G + + +C + TC + C C GP+C++
Sbjct: 707 YRRETPSLGPYSPCVLCTCNG---HSETCDPESGVCNCRDNTAGPNCEK 752
>UNIPROTKB|F1NB08 [details] [associations]
symbol:SCARF1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005044 "scavenger receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0030169 "low-density lipoprotein
particle binding" evidence=IEA] [GO:0048680 "positive regulation of
axon regeneration" evidence=IEA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 GO:GO:0016021 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0030169
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
GeneTree:ENSGT00690000101691 OMA:GWWGPEC EMBL:AADN02025906
IPI:IPI00811359 Ensembl:ENSGALT00000004467 Uniprot:F1NB08
Length = 766
Score = 171 (65.3 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 47/145 (32%), Positives = 61/145 (42%)
Query: 33 LCYNKCI---YGYCKGPPDYSCQCELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWT 88
LC +C +G C P +C+CE GW G DC C CN S C G C C
Sbjct: 129 LCQFRCPCGPHGRCD-PTTGACRCEPGWWGPDCKRQCQCNLATSRCDTLTGHC-HCRPGW 186
Query: 89 TGDHCQY---CR----AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQG 141
G C++ C A GN + G C H N V G C+ + G C C+ QG
Sbjct: 187 WGRKCRFKCSCNLSPCAQETGNCKCKAGFWGSACQWHCNCVHGSCNPLNGYCSCEPGFQG 246
Query: 142 KNCER-CLPGYYGDPTDGGTCYYQC 165
++C+ C G YG C + C
Sbjct: 247 RSCQDPCPAGTYGSQ-----CVHSC 266
Score = 146 (56.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 53/180 (29%), Positives = 69/180 (38%)
Query: 32 SLCYNKCIYGYCK-----GPPDYSC-QCELGWTGVDCSVNCL--------------CNNH 71
S C + C G CK P D C C+ GW G C C C
Sbjct: 260 SQCVHSC--GNCKHSQPCSPVDGFCLACQPGWNGTLCKERCTPGFHGQGCLQPCPQCRQG 317
Query: 72 STCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSIT 130
C G C C TG C C AG++G+ Q C +C V G CD ++
Sbjct: 318 DICDAETGSCPRCEPGWTGPSCNSSCPAGTFGDGC-QLLCPEC--------VWGSCDPVS 368
Query: 131 GECICQDNTQGKNCERCLP-GYYGDPTDGGTCYYQCMARGML-TGPGPQGLGSGLAERNA 188
G+C+CQ G +C P G++G C QC +RG G L +GL + A
Sbjct: 369 GDCLCQAGYWGASCNNTCPEGFFG-VNCSSPC--QC-SRGTCHPAQGDCILNTGLTDHAA 424
Score = 135 (52.6 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 41/147 (27%), Positives = 57/147 (38%)
Query: 38 CIY-GYCKGPP-----DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C+ G C+ P D S C + G DC C C+ TC G C C+ G+
Sbjct: 70 CVRPGLCRCKPGFFGADCSSPCPAQYWGHDCKRRCPCHPGGTCEAESGRCT-CNPERWGE 128
Query: 92 HCQY-CRAGSYGNATTQEGCRKC-------DCNSHGNSVLGV--CDSITGECICQDNTQG 141
CQ+ C G +G G +C DC L CD++TG C C+ G
Sbjct: 129 LCQFRCPCGPHGRCDPTTGACRCEPGWWGPDCKRQCQCNLATSRCDTLTGHCHCRPGWWG 188
Query: 142 KNCE-RCLPGYYGDPTDGGTCYYQCMA 167
+ C +C + G C +C A
Sbjct: 189 RKCRFKCSCNLSPCAQETGNC--KCKA 213
Score = 55 (24.4 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQCVCP---PRRTGPDCQEEICP 333
GF+ + CP +C + C CP P TGP C CP
Sbjct: 301 GFHGQGCLQPCP-QCRQGDICDAETGSCPRCEPGWTGPSCNSS-CP 344
Score = 49 (22.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 312 INNQCVCPPRRTGPDCQEEICP 333
+N C C P G CQ+ CP
Sbjct: 234 LNGYCSCEPGFQGRSCQDP-CP 254
Score = 41 (19.5 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 16/53 (30%), Positives = 21/53 (39%)
Query: 294 ATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
A Y SC + CPE +N C P + + C +C LN G D
Sbjct: 375 AGYWGASCNNTCPEGFFGVN--CSSPCQCSRGTCHP--AQGDC--ILNTGLTD 421
Score = 39 (18.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 296 YQIFSCPDKCPENRTCINNQCV 317
+Q SC D CP +QCV
Sbjct: 244 FQGRSCQDPCPAGT--YGSQCV 263
>UNIPROTKB|F1SPT5 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 EMBL:CU856115
Ensembl:ENSSSCT00000012455 ArrayExpress:F1SPT5 Uniprot:F1SPT5
Length = 1642
Score = 181 (68.8 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 42/121 (34%), Positives = 56/121 (46%)
Query: 52 QCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG- 109
+C+ G G C+CN H+ C G C C D T G+HC+ C AG +G+ G
Sbjct: 865 RCQRGQWGFPSCRPCVCNGHADECDTHTGTCLGCRDHTGGEHCERCIAGFHGDPRLPYGG 924
Query: 110 -CRKCDCNSHGNS---VLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGDPT-DGGT 160
CR C C S C D + + C C+ G CE C PG++GDP+ GG
Sbjct: 925 QCRPCPCPEGPGSQRHFATSCHRDGYSQQIVCHCRAGYTGLRCEACAPGHFGDPSRPGGR 984
Query: 161 C 161
C
Sbjct: 985 C 985
Score = 181 (68.8 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 47/149 (31%), Positives = 68/149 (45%)
Query: 49 YSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
++C+ CE C + S V G G+CD C T G HC+ CR Y + T
Sbjct: 344 HACKKCECHGHAHSCHFDMAIYLASGNVSG-GVCDGCQHNTAGRHCELCRPFFYRDPTKD 402
Query: 108 ---EG-CRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYYG-D 154
G CR CDC+ G+ G CD ++G+C C+++ G C++C G++G
Sbjct: 403 LRDPGVCRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLS 462
Query: 155 PTDGGTCYY-QCMARGMLTGPGPQGLGSG 182
+D C QC RG + G P SG
Sbjct: 463 ASDALGCQRCQCDTRGTVPGGTPCDRNSG 491
Score = 174 (66.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 33/90 (36%), Positives = 48/90 (53%)
Query: 68 CNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLG 124
C+ H G+ G C C + G CQ CR G +G +A+ GC++C C++ G G
Sbjct: 425 CDPHDDPALGLVSGQC-RCKEHVVGSRCQQCRDGFFGLSASDALGCQRCQCDTRGTVPGG 483
Query: 125 V-CDSITGECICQDNTQGKNCERCLPGYYG 153
CD +G C C+ G+ C RCLPG++G
Sbjct: 484 TPCDRNSGACFCKRLVTGRGCNRCLPGHWG 513
Score = 171 (65.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 46/135 (34%), Positives = 61/135 (45%)
Query: 53 CELGWTG---VDCSVNCLCNNHST----CVHGIGICDECHDWTTGDHCQYCRAGSYGNAT 105
C G+ G C C C+ C G C C G C C+ G +G +
Sbjct: 818 CAPGYYGFGPTGCQA-CQCSPEGALSGLCEATSGQCP-CRTGAFGLRCDRCQRGQWGFPS 875
Query: 106 TQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPT--DGGTCY 162
CR C CN H + CD+ TG C+ C+D+T G++CERC+ G++GDP GG C
Sbjct: 876 ----CRPCVCNGHADE----CDTHTGTCLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCR 927
Query: 163 YQCMARGMLTGPGPQ 177
C GPG Q
Sbjct: 928 -PCPCP---EGPGSQ 938
Score = 152 (58.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 36/112 (32%), Positives = 51/112 (45%)
Query: 52 QCELGWTGVDCS-----VNCLCNNHST------CVHGIGICDECHDWTTGDHCQYCRAGS 100
QC G+ G+ S C C+ T C G C C TG C C G
Sbjct: 453 QCRDGFFGLSASDALGCQRCQCDTRGTVPGGTPCDRNSGACF-CKRLVTGRGCNRCLPGH 511
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G + GCR CDC+ G ++ C+ TG+C C+ + G+ CE+ PGY+
Sbjct: 512 WGLSHDLLGCRPCDCDI-GGALDPQCNEATGQCRCRQHMVGRCCEQVQPGYF 562
Score = 147 (56.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 42/134 (31%), Positives = 58/134 (43%)
Query: 38 CIYGYCKGP--PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
C G+ P P CQ CE G +D + C+ HS G C C T G HC
Sbjct: 970 CAPGHFGDPSRPGGRCQPCECG--NIDPTDPDACDPHS------GQCLRCLHHTEGPHCA 1021
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGV-------CDSITGECICQDNTQGKNCERC 147
+C+ G +G A Q C +C+CN G CD +G+C C + +C+RC
Sbjct: 1022 HCKPGFHGQAARQS-CHRCNCNLLGTDPQQCPSPDRCNCDQSSGQCPCLSQ-RDLSCDRC 1079
Query: 148 LPGYYGDPTDGGTC 161
P + + T G C
Sbjct: 1080 APSW--NLTSGRGC 1091
Score = 137 (53.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/119 (31%), Positives = 49/119 (41%)
Query: 43 CKGPPDYSC-QCELGW---TGVDCSVNCLCN-NHS---TCVHGIGICDECHDWTTGDHCQ 94
C D SC +C W +G C C C+ + S TC G C C G C
Sbjct: 1068 CLSQRDLSCDRCAPSWNLTSGRGCQP-CACHPSRSRGPTCNEFTGQC-HCRTGFGGRTCS 1125
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
C+ +G+ Q CR CDC+ G C TG C C+ G C++C G+ G
Sbjct: 1126 ECQELHWGDPGLQ--CRACDCDPRGIDT-PQCHRSTGHCSCRPGVSGVRCDQCARGFSG 1181
Score = 125 (49.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 36/106 (33%), Positives = 54/106 (50%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRAGSYGNAT---TQEG----CRKCDCNSHGNS------ 121
VHG IC H+ T G +C+ C+ Y + ++G C+KC+C+ H +S
Sbjct: 308 VHGACICK--HN-TRGLNCEQCQ-DFYHDLPWHPAEDGHSHACKKCECHGHAHSCHFDMA 363
Query: 122 VLGVCDSITGE-CI-CQDNTQGKNCERCLPGYYGDPT----DGGTC 161
+ +++G C CQ NT G++CE C P +Y DPT D G C
Sbjct: 364 IYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPGVC 409
Score = 124 (48.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/66 (37%), Positives = 33/66 (50%)
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGTCYYQCMA 167
G C C+ G S+ C+ G+C+C+ G+ C C PGYYG PT C QC
Sbjct: 781 GALPCQCDPQG-SLSSECNPHGGQCLCKPAVVGRRCNICAPGYYGFGPTGCQAC--QCSP 837
Query: 168 RGMLTG 173
G L+G
Sbjct: 838 EGALSG 843
Score = 52 (23.4 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 300 SCPDKCPENRTCINNQ----CVCPPRRT-GPDCQEEICPNECH 337
SC D+C + + + C C P R+ GP C E +CH
Sbjct: 1075 SC-DRCAPSWNLTSGRGCQPCACHPSRSRGPTCNE--FTGQCH 1114
Score = 46 (21.3 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT 344
QC C G C E++ P FL+H T
Sbjct: 542 QCRCRQHMVGRCC-EQVQPGYFRPFLDHLT 570
Score = 39 (18.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 315 QCVCPPRRTGPDCQEEIC 332
QC+C P G C IC
Sbjct: 803 QCLCKPAVVGRRCN--IC 818
Score = 38 (18.4 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGV 352
C C PR G D P +CH H +C ++GV
Sbjct: 1142 CDCDPR--GIDT-----P-QCHRSTGHCSCRPGVSGV 1170
>FB|FBgn0004647 [details] [associations]
symbol:N "Notch" species:7227 "Drosophila melanogaster"
[GO:0007498 "mesoderm development" evidence=IMP] [GO:0007398
"ectoderm development" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005622 "intracellular" evidence=NAS;IDA]
[GO:0016360 "sensory organ precursor cell fate determination"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP;TAS] [GO:0030707 "ovarian follicle cell development"
evidence=IMP;TAS] [GO:0001708 "cell fate specification"
evidence=NAS;TAS] [GO:0007219 "Notch signaling pathway"
evidence=NAS] [GO:0009952 "anterior/posterior pattern
specification" evidence=TAS] [GO:0036011 "imaginal disc-derived leg
segmentation" evidence=IMP] [GO:0007478 "leg disc morphogenesis"
evidence=TAS] [GO:0061382 "Malpighian tubule tip cell
differentiation" evidence=IMP] [GO:0005887 "integral to plasma
membrane" evidence=NAS] [GO:0004872 "receptor activity"
evidence=NAS;TAS] [GO:0045165 "cell fate commitment" evidence=NAS]
[GO:0007424 "open tracheal system development" evidence=TAS]
[GO:0035155 "negative regulation of terminal cell fate
specification, open tracheal system" evidence=TAS] [GO:0035157
"negative regulation of fusion cell fate specification"
evidence=TAS] [GO:0007446 "imaginal disc growth" evidence=TAS]
[GO:0007447 "imaginal disc pattern formation" evidence=TAS]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=NAS;TAS] [GO:0007155 "cell adhesion" evidence=TAS]
[GO:0016021 "integral to membrane" evidence=IEA;TAS] [GO:0045463
"R8 cell development" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007460 "R8 cell fate commitment" evidence=TAS]
[GO:0007422 "peripheral nervous system development"
evidence=IMP;TAS] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP;TAS] [GO:0016333 "morphogenesis of follicular
epithelium" evidence=NAS] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=TAS] [GO:0007314 "oocyte
anterior/posterior axis specification" evidence=TAS] [GO:0007451
"dorsal/ventral lineage restriction, imaginal disc" evidence=TAS]
[GO:0042067 "establishment of ommatidial planar polarity"
evidence=NAS;TAS] [GO:0048749 "compound eye development"
evidence=NAS;TAS] [GO:0007423 "sensory organ development"
evidence=IMP] [GO:0016330 "second mitotic wave involved in compound
eye morphogenesis" evidence=NAS] [GO:0046667 "compound eye retinal
cell programmed cell death" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045465 "R8 cell differentiation"
evidence=NAS] [GO:0045468 "regulation of R8 cell spacing in
compound eye" evidence=NAS] [GO:0061331 "epithelial cell
proliferation involved in Malpighian tubule morphogenesis"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP;NAS] [GO:0007450 "dorsal/ventral
pattern formation, imaginal disc" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA;NAS;TAS] [GO:0046331 "lateral inhibition"
evidence=IMP;NAS;TAS] [GO:0046329 "negative regulation of JNK
cascade" evidence=NAS] [GO:0007391 "dorsal closure" evidence=TAS]
[GO:0001737 "establishment of imaginal disc-derived wing hair
orientation" evidence=NAS] [GO:0009608 "response to symbiont"
evidence=IMP] [GO:0035171 "lamellocyte differentiation"
evidence=IMP] [GO:0042688 "crystal cell differentiation"
evidence=IMP] [GO:0042676 "compound eye cone cell fate commitment"
evidence=TAS] [GO:0035162 "embryonic hemopoiesis" evidence=IMP]
[GO:0035172 "hemocyte proliferation" evidence=IMP] [GO:0035167
"larval lymph gland hemopoiesis" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007464 "R3/R4 cell fate commitment"
evidence=NAS] [GO:0046666 "retinal cell programmed cell death"
evidence=TAS] [GO:0007473 "wing disc proximal/distal pattern
formation" evidence=TAS] [GO:0042689 "regulation of crystal cell
differentiation" evidence=TAS] [GO:0008356 "asymmetric cell
division" evidence=TAS] [GO:0007419 "ventral cord development"
evidence=NAS] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007521
"muscle cell fate determination" evidence=IMP] [GO:0042686
"regulation of cardioblast cell fate specification" evidence=IMP]
[GO:0045466 "R7 cell differentiation" evidence=IMP;TAS] [GO:0008587
"imaginal disc-derived wing margin morphogenesis" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=TAS]
[GO:0035170 "lymph gland crystal cell differentiation"
evidence=TAS] [GO:0048477 "oogenesis" evidence=IMP] [GO:0030720
"oocyte localization involved in germarium-derived egg chamber
formation" evidence=IMP] [GO:0035165 "embryonic crystal cell
differentiation" evidence=TAS] [GO:0040008 "regulation of growth"
evidence=IGI;IMP] [GO:0001745 "compound eye morphogenesis"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007440 "foregut morphogenesis" evidence=IMP] [GO:0007616
"long-term memory" evidence=IGI;IMP;TAS] [GO:0007615
"anesthesia-resistant memory" evidence=IMP] [GO:0048542 "lymph
gland development" evidence=IMP] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=IDA;IMP] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IMP] [GO:0045316
"negative regulation of compound eye photoreceptor development"
evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045750 "positive regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0007015 "actin
filament organization" evidence=IMP] [GO:0048190 "wing disc
dorsal/ventral pattern formation" evidence=IMP] [GO:0007298 "border
follicle cell migration" evidence=IMP] [GO:0007297 "ovarian
follicle cell migration" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] [GO:0031410 "cytoplasmic vesicle"
evidence=IDA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0010001 "glial cell differentiation" evidence=IMP] [GO:0008347
"glial cell migration" evidence=IMP] [GO:0035003 "subapical
complex" evidence=IDA] [GO:0005912 "adherens junction"
evidence=IDA] [GO:0035153 "epithelial cell type specification, open
tracheal system" evidence=IMP] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0050767 "regulation of neurogenesis"
evidence=IMP] [GO:0048863 "stem cell differentiation" evidence=IMP]
[GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0010629 "negative regulation of gene expression"
evidence=IMP] [GO:0043234 "protein complex" evidence=IPI]
[GO:0030718 "germ-line stem cell maintenance" evidence=IMP]
[GO:0048052 "R1/R6 cell differentiation" evidence=IMP] [GO:0035214
"eye-antennal disc development" evidence=IMP] [GO:0007400
"neuroblast fate determination" evidence=IDA] [GO:0045595
"regulation of cell differentiation" evidence=IMP] [GO:0008045
"motor neuron axon guidance" evidence=IMP] [GO:0051489 "regulation
of filopodium assembly" evidence=IMP] [GO:0016348 "imaginal
disc-derived leg joint morphogenesis" evidence=IMP] [GO:0048803
"imaginal disc-derived male genitalia morphogenesis" evidence=IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0060288 "formation of
a compartment boundary" evidence=IMP] Reactome:REACT_84305
Reactome:REACT_97910 InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005829 GO:GO:0048190 GO:GO:0043234
GO:GO:0005654 GO:GO:0009986 GO:GO:0007015 GO:GO:0007498
GO:GO:0007391 eggNOG:COG0666 GO:GO:0008284 GO:GO:0005768
GO:GO:0007474 EMBL:AE014298 GO:GO:0061331 GO:GO:0007464
GO:GO:0007419 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0045944 GO:GO:0007219 GO:GO:0007616
GO:GO:0007422 GO:GO:0005509 GO:GO:0045747 GO:GO:0006351
GO:GO:0003682 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007400
GO:GO:0000122 GO:GO:0008045 GO:GO:0005788 GO:GO:0007298
GO:GO:0005912 GO:GO:0040008 PROSITE:PS01186 GO:GO:0046331
GO:GO:0007157 PROSITE:PS00010 GO:GO:0005796 GO:GO:0046329
GO:GO:0007398 GO:GO:0004888 GO:GO:0008356 GO:GO:0030718
GO:GO:0045750 GO:GO:0007451 GO:GO:0051489 GO:GO:0050768
GO:GO:0046843 GO:GO:0046667 GO:GO:0035153 GO:GO:0030720
GO:GO:0008347 GO:GO:0030713 GO:GO:0061382 GO:GO:0008407
GO:GO:0016330 GO:GO:0008587 GO:GO:0007314 GO:GO:0016348
GO:GO:0009608 GO:GO:0035172 GO:GO:0035214 GO:GO:0035003
GO:GO:0030708 GO:GO:0045463 GO:GO:0007519
GeneTree:ENSGT00700000104305 GO:GO:0007403 GO:GO:0060288
GO:GO:0007446 GO:GO:0007440 GO:GO:0007473 GO:GO:0035171
GO:GO:0042676 GO:GO:0035157 GO:GO:0035155 GO:GO:0007460
GO:GO:0045468 GO:GO:0045466 GO:GO:0048052 GO:GO:0048803
EMBL:AL035395 GO:GO:0035165 SUPFAM:SSF90193 GO:GO:0007521
GO:GO:0045316 GO:GO:0035170 KO:K02599 InterPro:IPR024600
Pfam:PF11936 EMBL:M16152 EMBL:M16153 EMBL:M16149 EMBL:M16150
EMBL:M16151 EMBL:K03508 EMBL:M13689 EMBL:K03507 EMBL:AL035436
EMBL:M16025 EMBL:M12175 PIR:A24420 RefSeq:NP_001245510.1
RefSeq:NP_476859.2 UniGene:Dm.4702 PDB:1OT8 PDB:2JMF PDBsum:1OT8
PDBsum:2JMF ProteinModelPortal:P07207 SMR:P07207 DIP:DIP-5N
IntAct:P07207 MINT:MINT-133064 STRING:P07207 PaxDb:P07207
EnsemblMetazoa:FBtr0070507 EnsemblMetazoa:FBtr0304659 GeneID:31293
KEGG:dme:Dmel_CG3936 CTD:109544 FlyBase:FBgn0004647
InParanoid:P07207 OMA:VCMPGFT OrthoDB:EOG43N5TG
Reactome:REACT_118588 EvolutionaryTrace:P07207 GenomeRNAi:31293
NextBio:772898 Bgee:P07207 GermOnline:CG3936 GO:GO:0042686
GO:GO:0042689 Uniprot:P07207
Length = 2703
Score = 162 (62.1 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 41/138 (29%), Positives = 61/138 (44%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD----HCQYCRAGSYGNA 104
+SC+C GWTG C V + + G+ + C++ T D H YC G Y +
Sbjct: 1120 FSCKCSAGWTGKLCDVQTISCQDAADRKGLSLRQLCNNGTCKDYGNSHVCYCSQG-YAGS 1178
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT-DGGTC 161
Q+ +C N G C + G EC C+ QG+NCE + +P +GGTC
Sbjct: 1179 YCQKEIDECQSQPCQNG--GTCRDLIGAYECQCRQGFQGQNCELNIDDCAPNPCQNGGTC 1236
Query: 162 YYQCMARGMLTGPGPQGL 179
+ + M PG G+
Sbjct: 1237 HDRVMNFSCSCPPGTMGI 1254
Score = 160 (61.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 87/333 (26%), Positives = 122/333 (36%)
Query: 34 CYNKCIYGYCKGP-PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDH 92
C N+ G C YSC+C G+TG C +N + + C G +C D
Sbjct: 573 CRNR---GICHDSIAGYSCECPPGYTGTSCEININDCDSNPCHRG-----KCIDDVNSFK 624
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERCLPG 150
C C G Y Q+ +C+ N G C G C CQ T GKNCE +
Sbjct: 625 C-LCDPG-YTGYICQKQINECESNPCQFD--GHCQDRVGSYYCQCQAGTSGKNCEVNVNE 680
Query: 151 YYGDP-TDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDS 209
+ +P +G TC + PG G E+N E +P I Q
Sbjct: 681 CHSNPCNNGATCIDGINSYKCQCVPGFTGQH---CEKNVDECISSPCANNGVCIDQVNGY 737
Query: 210 NSTAPADIILLRLQPDINV----PC-NENAVYIYDGLPDFVTSV--GGTHQSTTLGVF-C 261
P D++ PC NE DG+ +F+ G T + L + C
Sbjct: 738 KCECPRGFYDAHCLSDVDECASNPCVNEGRCE--DGINEFICHCPPGYTGKRCELDIDEC 795
Query: 262 TED--MHRG--YEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSC-PDKCPENRTCINN-- 314
+ + H G Y+ L A S Y G+ E I C + C TCI+
Sbjct: 796 SSNPCQHGGTCYDKLNAFSCQCMPGYT-GQKCET-----NIDDCVTNPCGNGGTCIDKVN 849
Query: 315 --QCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+CVC TG DC+ ++ P + N C
Sbjct: 850 GYKCVCKVPFTGRDCESKMDPCASNRCKNEAKC 882
Score = 145 (56.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 89/357 (24%), Positives = 131/357 (36%)
Query: 41 GYCKGPPD-YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHCQYCRA 98
G C P + C C G+TG C ++ C ++ C++ CHD G C C
Sbjct: 501 GSCLDDPGTFRCVCMPGFTGTQCEIDIDECQSNP-CLND----GTCHDKINGFKCS-CAL 554
Query: 99 GSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYYGDPT 156
G G A Q DC S G+C DSI G C C G +CE + +P
Sbjct: 555 GFTG-ARCQINID--DCQSQPCRNRGICHDSIAGYSCECPPGYTGTSCEININDCDSNPC 611
Query: 157 DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSR---ECLWIIGQSL-DSNST 212
G C + L PG G + ++ E + P + C +G +
Sbjct: 612 HRGKCIDDVNSFKCLCDPGYTGY---ICQKQINECESNPCQFDGHCQDRVGSYYCQCQAG 668
Query: 213 APADIILLRLQPDINVPCNENAVYIYDGLPDFVTS-VGGTHQSTTLGVFCTEDMHRGYEV 271
+ + + PCN A I DG+ + V G G C +++
Sbjct: 669 TSGKNCEVNVNECHSNPCNNGATCI-DGINSYKCQCVPGF-----TGQHCEKNVDECISS 722
Query: 272 LEAKSGVMTIH---YKQGKPSEGFNATYQIFSCPDKCPENRTCIN--------NQ--CVC 318
A +GV YK P GF + + S D+C N C+N N+ C C
Sbjct: 723 PCANNGVCIDQVNGYKCECP-RGFYDAHCL-SDVDECASN-PCVNEGRCEDGINEFICHC 779
Query: 319 PPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRCTCRQVY 375
PP TG C+ +I +EC + C HG T + +++ C C Y
Sbjct: 780 PPGYTGKRCELDI--DEC----SSNPCQ---------HGGTCYDKLNAFSCQCMPGY 821
Score = 141 (54.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 82/336 (24%), Positives = 123/336 (36%)
Query: 36 NKCIYG-YCKGPP-DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
N C YG C Y C C G+TG DC + S C +G GIC C
Sbjct: 224 NPCKYGGTCVNTHGSYQCMCPTGYTGKDCDTKYKPCSPSPCQNG-GIC---RSNGLSYEC 279
Query: 94 QYCRAGSYGNATTQ--EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE----RC 147
+ C G G Q + C C + G + G+ D C C N G+ C+ C
Sbjct: 280 K-CPKGFEGKNCEQNYDDCLGHLCQNGGTCIDGISDYT---CRCPPNFTGRFCQDDVDEC 335
Query: 148 LPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSL 207
+ +G TC + + G GL + + C+ +G S
Sbjct: 336 AQRDHPVCQNGATCTNTHGSYSCICVNGWAGLDCSNNTDDCKQAACFYGATCIDGVG-SF 394
Query: 208 DSNSTAPADIILLRLQPDINV-PCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMH 266
T +L L PC+ +A I D P S + + GV C+ED+
Sbjct: 395 YCQCTKGKTGLLCHLDDACTSNPCHADA--ICDTSP-INGSYACSCATGYKGVDCSEDID 451
Query: 267 RGYEVLEAK-SGVM--TIHYKQGKPSEGFNATY---QIFSCPDK-CPENRTCINN----Q 315
+ + +G+ T + S+GF I C C +C+++ +
Sbjct: 452 ECDQGSPCEHNGICVNTPGSYRCNCSQGFTGPRCETNINECESHPCQNEGSCLDDPGTFR 511
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTG 351
CVC P TG C+ +I + + LN GTC + G
Sbjct: 512 CVCMPGFTGTQCEIDIDECQSNPCLNDGTCHDKING 547
Score = 136 (52.9 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 38/116 (32%), Positives = 49/116 (42%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
Y+C C LG++G++C N S+C++G G C D G +C C AG Y A Q
Sbjct: 1006 YTCTCPLGFSGINCQTNDEDCTESSCLNG-G---SCIDGINGYNCS-CLAG-YSGANCQY 1059
Query: 109 GCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERCLPGYYGDPTDGG-TC 161
KCD N N C E C C GK C + P + G TC
Sbjct: 1060 KLNKCDSNPCLNGA--TCHEQNNEYTCHCPSGFTGKQCSEYVDWCGQSPCENGATC 1113
Score = 123 (48.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 35/118 (29%), Positives = 51/118 (43%)
Query: 48 DYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGN--A 104
D+SC C+LG+TG C + C+ S C +G C + G + C G G A
Sbjct: 890 DFSCTCKLGYTGRYCDEDIDECSLSSPCRNGAS----CLN-VPGSYRCLCTKGYEGRDCA 944
Query: 105 TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT-DGGTC 161
+ C C + G + G+ D C+C D GK+CE + P +G TC
Sbjct: 945 INTDDCASFPCQNGGTCLDGIGDY---SCLCVDGFDGKHCETDINECLSQPCQNGATC 999
Score = 122 (48.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 41/132 (31%), Positives = 53/132 (40%)
Query: 46 PPDYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIG--ICDECHDWTTGDHCQYCR 97
P Y C C G+ G DC++N C C N TC+ GIG C C D G HC+
Sbjct: 927 PGSYRCLCTKGYEGRDCAINTDDCASFPCQNGGTCLDGIGDYSC-LCVDGFDGKHCE--- 982
Query: 98 AGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
+ N + C+ C+ + NS C CQ N + CL G G
Sbjct: 983 --TDINECLSQPCQNGATCSQYVNSYTCTCPLGFSGINCQTNDEDCTESSCLNG--GSCI 1038
Query: 157 DGGTCYY-QCMA 167
DG Y C+A
Sbjct: 1039 DGINGYNCSCLA 1050
Score = 122 (48.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 44/153 (28%), Positives = 60/153 (39%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTG 90
+S C N G ++C C G+TG CS + + C +G G C H G
Sbjct: 183 SSPCRNGATCTALAGSSSFTCSCPPGFTGDTCSYDIEECQSNPCKYG-GTCVNTH----G 237
Query: 91 DHCQYCRAGSYGNA--TTQEGCRKCDCNSHGNSVLGVCDS--ITGECICQDNTQGKNCER 146
+ C G G T + C C + G G+C S ++ EC C +GKNCE+
Sbjct: 238 SYQCMCPTGYTGKDCDTKYKPCSPSPCQN-G----GICRSNGLSYECKCPKGFEGKNCEQ 292
Query: 147 CLPGYYGDPT-DGGTCY-----YQCMARGMLTG 173
G +GGTC Y C TG
Sbjct: 293 NYDDCLGHLCQNGGTCIDGISDYTCRCPPNFTG 325
Score = 119 (46.9 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 43/155 (27%), Positives = 60/155 (38%)
Query: 30 NASLCYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNC--LCNNHSTCVHGIGICDECH 85
N+ C N C + G P SC+C LG+ C + C+ H TC++G G C
Sbjct: 101 NSMRCQNGGTCQVTFRNGRPGISCKCPLGFDESLCEIAVPNACD-HVTCLNG-GTCQLK- 157
Query: 86 DWTTGDHCQYCRAGSYGN-ATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
T ++ C G G T+ C C + G + + S + C C G C
Sbjct: 158 --TLEEYTCACANGYTGERCETKNLCASSPCRN-GATCTALAGSSSFTCSCPPGFTGDTC 214
Query: 145 ERCLPGYYGDPTD-GGTCY-----YQCMARGMLTG 173
+ +P GGTC YQCM TG
Sbjct: 215 SYDIEECQSNPCKYGGTCVNTHGSYQCMCPTGYTG 249
Score = 116 (45.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 40/143 (27%), Positives = 57/143 (39%)
Query: 36 NKCIY-GYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
N C+ G C + + C C LG+TG C +N C GIC HD G C
Sbjct: 533 NPCLNDGTCHDKINGFKCSCALGFTGARCQINIDDCQSQPC-RNRGIC---HDSIAGYSC 588
Query: 94 QYCRAGSYGNATTQEGCRKCDCNS-HGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+ C G Y + + CD N H + +S +C+C G C++ +
Sbjct: 589 E-CPPG-YTGTSCEININDCDSNPCHRGKCIDDVNSF--KCLCDPGYTGYICQKQINECE 644
Query: 153 GDPT--DG------GTCYYQCMA 167
+P DG G+ Y QC A
Sbjct: 645 SNPCQFDGHCQDRVGSYYCQCQA 667
Score = 112 (44.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 49/164 (29%), Positives = 65/164 (39%)
Query: 41 GYC-KGPPDYSCQCELGWTGVDCS--VN-CL---CNNHSTCVHGIG--ICDECHDWTTGD 91
G C G DYSC C G+ G C +N CL C N +TC + C C +G
Sbjct: 959 GTCLDGIGDYSCLCVDGFDGKHCETDINECLSQPCQNGATCSQYVNSYTCT-CPLGFSGI 1017
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCLPG 150
+CQ T E C + C + G+ + D I G C C G NC+ L
Sbjct: 1018 NCQ----------TNDEDCTESSCLNGGSCI----DGINGYNCSCLAGYSGANCQYKLNK 1063
Query: 151 YYGDPT-DGGTCYYQCMARGMLTGPGPQGL-GSGLAERNAWEGK 192
+P +G TC+ Q T P G G +E W G+
Sbjct: 1064 CDSNPCLNGATCHEQ---NNEYTCHCPSGFTGKQCSEYVDWCGQ 1104
Score = 104 (41.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 43/155 (27%), Positives = 62/155 (40%)
Query: 36 NKCIYGY-C-KGPPDYSCQCELGWTGVDCS--VN-C---LCNNHSTCV---HGIGICDEC 84
N C+ G C + +Y+C C G+TG CS V+ C C N +TC H C +C
Sbjct: 1067 NPCLNGATCHEQNNEYTCHCPSGFTGKQCSEYVDWCGQSPCENGATCSQMKHQFS-C-KC 1124
Query: 85 HDWTTGDHCQY----CR-AGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
TG C C+ A + ++ C C +GNS + C C
Sbjct: 1125 SAGWTGKLCDVQTISCQDAADRKGLSLRQLCNNGTCKDYGNSHV---------CYCSQGY 1175
Query: 140 QGKNCERCLPGYYGDPT-DGGTCY-----YQCMAR 168
G C++ + P +GGTC Y+C R
Sbjct: 1176 AGSYCQKEIDECQSQPCQNGGTCRDLIGAYECQCR 1210
Score = 98 (39.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 36/128 (28%), Positives = 53/128 (41%)
Query: 41 GYC--KGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRA 98
G C K +Y+C C G+TG C LC + S C +G C ++ C C
Sbjct: 152 GTCQLKTLEEYTCACANGYTGERCETKNLCAS-SPCRNG-ATCTALAG-SSSFTCS-CPP 207
Query: 99 GSYGNATTQ--EGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGD 154
G G+ + E C+ C +G G C + G +C+C GK+C+
Sbjct: 208 GFTGDTCSYDIEECQSNPCK-YG----GTCVNTHGSYQCMCPTGYTGKDCDTKYKPCSPS 262
Query: 155 PT-DGGTC 161
P +GG C
Sbjct: 263 PCQNGGIC 270
Score = 86 (35.3 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 25/77 (32%), Positives = 34/77 (44%)
Query: 277 GVMTIHYKQGKPSEGFNATYQIFSC-PDKCPENRTC----INNQCVCPPRRTGPDCQ--E 329
G +QG +G N I C P+ C TC +N C CPP G C+ +
Sbjct: 1203 GAYECQCRQG--FQGQNCELNIDDCAPNPCQNGGTCHDRVMNFSCSCPPGTMGIICEINK 1260
Query: 330 EIC-PNECHEFLNHGTC 345
+ C P CH N+G+C
Sbjct: 1261 DDCKPGACH---NNGSC 1274
Score = 77 (32.2 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 26/77 (33%), Positives = 35/77 (45%)
Query: 302 PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDL--LLTGVH 353
P C N +CI+ +CVC P G C+ +I NEC + N GT D L+ H
Sbjct: 1265 PGACHNNGSCIDRVGGFECVCQPGFVGARCEGDI--NECLSNPCSNAGTLDCVQLVNNYH 1322
Query: 354 IT----H-GRTLHYQVD 365
H GR ++VD
Sbjct: 1323 CNCRPGHMGRHCEHKVD 1339
Score = 66 (28.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/62 (33%), Positives = 25/62 (40%)
Query: 291 GFNATYQIFSCPDK-CPENRTCI--NNQ--CVCPPRRTGPDCQEEI--CPNECHEFLNHG 343
G N Y++ C C TC NN+ C CP TG C E + C E N
Sbjct: 1054 GANCQYKLNKCDSNPCLNGATCHEQNNEYTCHCPSGFTGKQCSEYVDWCGQSPCE--NGA 1111
Query: 344 TC 345
TC
Sbjct: 1112 TC 1113
Score = 58 (25.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 28/126 (22%), Positives = 45/126 (35%)
Query: 229 PCNENAVYIYDGLPDF----VTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYK 284
PC +N DG+ D+ V G H T + ++ G + + T
Sbjct: 954 PC-QNGGTCLDGIGDYSCLCVDGFDGKHCETDINECLSQPCQNGATCSQYVNSY-TCTCP 1011
Query: 285 QGKPSEGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEF 339
G G N C + C +CI+ C C +G +CQ ++ + +
Sbjct: 1012 LG--FSGINCQTNDEDCTESSCLNGGSCIDGINGYNCSCLAGYSGANCQYKLNKCDSNPC 1069
Query: 340 LNHGTC 345
LN TC
Sbjct: 1070 LNGATC 1075
Score = 55 (24.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 312 INN-QCVCPPRRTGPDCQEEI--CPNE-CHEFLNHGTCDLLLTGVH 353
+NN C C P G C+ ++ C C N G C++ +G H
Sbjct: 1318 VNNYHCNCRPGHMGRHCEHKVDFCAQSPCQ---NGGNCNIRQSGHH 1360
Score = 55 (24.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 300 SCPDKCPENRTCIN----NQCVCPPRRTGPDCQEEICPNECHEF--LNHGTC 345
S C +C+N +C+C G DC I ++C F N GTC
Sbjct: 912 SLSSPCRNGASCLNVPGSYRCLCTKGYEGRDCA--INTDDCASFPCQNGGTC 961
Score = 54 (24.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/46 (36%), Positives = 20/46 (43%)
Query: 308 NRTC--INNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTC-DLL 348
N TC N C C G CQ+EI + N GTC DL+
Sbjct: 1157 NGTCKDYGNSHVCYCSQGYAGSYCQKEIDECQSQPCQNGGTCRDLI 1202
Score = 46 (21.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 314 NQCVCPPRRTGPDCQEEICPNECH--EFLNHGTCDLLLTGVH---ITHGRTLHYQVDLIR 368
++C P + G C++ I EC + C+L + +G T H +V
Sbjct: 1185 DECQSQPCQNGGTCRDLIGAYECQCRQGFQGQNCELNIDDCAPNPCQNGGTCHDRVMNFS 1244
Query: 369 CTC 371
C+C
Sbjct: 1245 CSC 1247
Score = 43 (20.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 302 PDKCPENRTCIN----NQCVCPPRRTGPDC 327
P+ C + C + +C+CP + G C
Sbjct: 1421 PNPCAQGAACEDLLGDYECLCPSKWKGKRC 1450
>UNIPROTKB|F1MEX4 [details] [associations]
symbol:ODZ2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
Gene3D:2.120.10.30 InterPro:IPR011042 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR008969 SUPFAM:SSF49464
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR006530
TIGRFAMs:TIGR01643 GeneTree:ENSGT00660000095277 InterPro:IPR022385
TIGRFAMs:TIGR03696 OMA:GHLFQKS EMBL:DAAA02021010 IPI:IPI00700439
Ensembl:ENSBTAT00000035030 Uniprot:F1MEX4
Length = 2278
Score = 154 (59.3 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 44/142 (30%), Positives = 59/142 (41%)
Query: 30 NASLCYNKC-IYGYCKGPPDYSCQCELGWTGVDCSVN-C--LCNNHSTCVHGIGICDECH 85
+ +C C +G C G +C+CE GWTG C C C H TC G C EC
Sbjct: 232 SVEVCSVDCGTHGVCIGG---ACRCEEGWTGAACDQRVCHPRCIEHGTCKDGK--C-ECR 285
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ G+HC G + T Q GC CN +G LG + +C+CQ +G C
Sbjct: 286 EGWNGEHCTI---GHF-LCTVQNGCPDL-CNGNGRCTLG---QNSWQCVCQTGWRGPGCN 337
Query: 146 RCLPGYYGDPTDG-GTCYYQCM 166
+ D D G C+
Sbjct: 338 VAMETSCADNKDNEGDGLVDCL 359
Score = 138 (53.6 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIGICDECHDWTTGDHC 93
C G YS CQC GW G +C V C+ C H +C+ G +C + G+HC
Sbjct: 108 CSGNGQYSKGTCQCYSGWKGAECDVPLNQCIDPSCGGHGSCIDGNCVCSAGYK---GEHC 164
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ + C C+SHG VC + GEC+C G NCE
Sbjct: 165 E------------EVDCLDPTCSSHG-----VC--VNGECLCSPGWGGLNCE 197
Score = 126 (49.4 bits), Expect = 0.00043, P = 0.00043
Identities = 40/131 (30%), Positives = 59/131 (45%)
Query: 34 CYNKCIYGYCKGPPDYS-CQCELGWTGVDCSVN-CL--CNNHSTCVHGIGICDECHDWTT 89
C ++C G+ PD C C+ W G DCSV C C H C+ G C+E WT
Sbjct: 203 CPDQCS-GHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCGTHGVCIGGACRCEE--GWT- 258
Query: 90 GDHC--QYCRAGSYGNATTQEGCRKCDCNSHGNS---VLG--VCDSITGEC--ICQDN-- 138
G C + C + T ++G KC+C N +G +C ++ C +C N
Sbjct: 259 GAACDQRVCHPRCIEHGTCKDG--KCECREGWNGEHCTIGHFLC-TVQNGCPDLCNGNGR 315
Query: 139 -TQGKNCERCL 148
T G+N +C+
Sbjct: 316 CTLGQNSWQCV 326
Score = 101 (40.6 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G N CPD+C + T + + C C P GPDC E+C +C HG C
Sbjct: 193 GLNCELARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCG---THGVC 246
Score = 82 (33.9 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C + CI C C TG C + +C C E HGTC
Sbjct: 236 CSVDCGTHGVCIGGACRCEEGWTGAACDQRVCHPRCIE---HGTC 277
Score = 63 (27.2 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQ--EEICP--NECHEFLN-HGTCDL 347
C +C E+ TC + +C C G C +C N C + N +G C L
Sbjct: 267 CHPRCIEHGTCKDGKCECREGWNGEHCTIGHFLCTVQNGCPDLCNGNGRCTL 318
Score = 61 (26.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 301 CPDKCPENRTCI---NN-QCVCPPRRTGPDC 327
CPD C N C N+ QCVC GP C
Sbjct: 306 CPDLCNGNGRCTLGQNSWQCVCQTGWRGPGC 336
>UNIPROTKB|O75095 [details] [associations]
symbol:MEGF6 "Multiple epidermal growth factor-like domains
protein 6" species:9606 "Homo sapiens" [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS00010 EMBL:AL512413
EMBL:AB011539 EMBL:AB231860 EMBL:AL513320 IPI:IPI00306850
IPI:IPI00788209 RefSeq:NP_001400.3 UniGene:Hs.593645
ProteinModelPortal:O75095 SMR:O75095 IntAct:O75095
MINT:MINT-2797336 STRING:O75095 PhosphoSite:O75095 PaxDb:O75095
PRIDE:O75095 DNASU:1953 Ensembl:ENST00000294599
Ensembl:ENST00000356575 GeneID:1953 KEGG:hsa:1953 UCSC:uc001akk.3
UCSC:uc001akl.3 CTD:1953 GeneCards:GC01M003396 H-InvDB:HIX0000066
HGNC:HGNC:3232 HPA:HPA052129 MIM:604266 neXtProt:NX_O75095
PharmGKB:PA27665 HOGENOM:HOG000097840 HOVERGEN:HBG079790
OMA:QGAACDP GenomeRNAi:1953 NextBio:7915 Bgee:O75095
CleanEx:HS_MEGF6 Genevestigator:O75095 GermOnline:ENSG00000162591
Uniprot:O75095
Length = 1541
Score = 167 (63.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 49/145 (33%), Positives = 63/145 (43%)
Query: 41 GYCKGPPDYSCQCELGWTG-------------VDCSVNCLCNNHSTCVHGIGICDECHDW 87
G C + SC C LGWTG C + C C+N+STC G C C
Sbjct: 1311 GLCHAS-NGSCSCGLGWTGRHCELACPPGRYGAACHLECSCHNNSTCEPATGTC-RCGPG 1368
Query: 88 TTGDHCQY-CRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G C++ C G +G GC+ C C HG CD I+G C+C G CE
Sbjct: 1369 FYGQACEHPCPPGFHG-----AGCQGLCWCQ-HG----APCDPISGRCLCPAGFHGHFCE 1418
Query: 146 R-CLPGYYGDPTDGGTCYYQCMARG 169
R C PG +G+ G C+ +C G
Sbjct: 1419 RGCEPGSFGE----G-CHQRCDCDG 1438
Score = 166 (63.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 46/133 (34%), Positives = 57/133 (42%)
Query: 39 IYGYCKGPPDYS-CQCELGWT----GVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
+ G C PP + +CE G GV C C C N C G C WT G HC
Sbjct: 1273 VTGTCLCPPGRAGVRCERGCPQNRFGVGCEHTCSCRNGGLCHASNGSCSCGLGWT-GRHC 1331
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGY 151
+ C G YG A C +C+ H NS C+ TG C C G+ CE C PG+
Sbjct: 1332 ELACPPGRYGAA-----CH-LECSCHNNST---CEPATGTCRCGPGFYGQACEHPCPPGF 1382
Query: 152 YGDPTDGGTCYYQ 164
+G G C+ Q
Sbjct: 1383 HGAGCQG-LCWCQ 1394
Score = 163 (62.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 42/122 (34%), Positives = 56/122 (45%)
Query: 41 GYCKGPPD---YSCQ--CELGWTGVDCSVNCLCN-NHSTCVHGIGICDECHDWTTGDHC- 93
G+C P +SCQ C+ G G DCS C C+ H +C G+C C G C
Sbjct: 843 GHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDAISGLC-LCEAGYVGPRCE 901
Query: 94 QYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-GY 151
Q C G +G GC ++C C HG CD ++G C C +G CE P G+
Sbjct: 902 QQCPQGHFG-----PGCEQRCQCQ-HG----AACDHVSGACTCPAGWRGTFCEHACPAGF 951
Query: 152 YG 153
+G
Sbjct: 952 FG 953
Score = 161 (61.7 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 48/154 (31%), Positives = 61/154 (39%)
Query: 34 CYNKCIY---GYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICDE 83
C + C+ G C P C C GW G+ C CL C + C++G G+CD
Sbjct: 1042 CRHSCLCQNGGTCD-PVSGHCACPEGWAGLACEKECLPRDVRAGCRHSGGCLNG-GLCDP 1099
Query: 84 ------CHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQ 136
C TGD CQ C G +G A Q +C C G C +TG C C
Sbjct: 1100 HTGRCLCPAGWTGDKCQSPCLRGWFGEACAQ----RCSCPP-G----AACHHVTGACRCP 1150
Query: 137 DNTQGKNCER-CLPGYYGDPTDGGTCYYQCMARG 169
G CE+ C PG +G+ C C G
Sbjct: 1151 PGFTGSGCEQACPPGSFGED-----CAQMCQCPG 1179
Score = 159 (61.0 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 37/107 (34%), Positives = 50/107 (46%)
Query: 51 CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQ 107
CQ C GW G C C C N C G C WT G CQ C G +G
Sbjct: 813 CQDVCPAGWYGPSCQTRCSCANDGHCHPATGHCSCAPGWT-GFSCQRACDTGHWG----P 867
Query: 108 EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ C+C++ G+ G CD+I+G C+C+ G CE+ C G++G
Sbjct: 868 DCSHPCNCSA-GH---GSCDAISGLCLCEAGYVGPRCEQQCPQGHFG 910
Score = 158 (60.7 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 45/132 (34%), Positives = 54/132 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N LC G C P ++ CQ C GW G C+ C C + C H G C C
Sbjct: 1093 NGGLCDPHT--GRCLCPAGWTGDKCQSPCLRGWFGEACAQRCSCPPGAACHHVTGAC-RC 1149
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGK 142
TG C Q C GS+G E C + C C + C TG C C G
Sbjct: 1150 PPGFTGSGCEQACPPGSFG-----EDCAQMCQCPGENPA----CHPATGTCSCAAGYHGP 1200
Query: 143 NCE-RCLPGYYG 153
+C+ RC PG YG
Sbjct: 1201 SCQQRCPPGRYG 1212
Score = 157 (60.3 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 39/99 (39%), Positives = 49/99 (49%)
Query: 59 GVDCSVNCL-CNNHSTCVHGIGICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDC 115
G DCS+ C C N TC+ G+ CD C + TG C + C ++G + C C C
Sbjct: 517 GHDCSLTCDDCRNGGTCLLGLDGCD-CPEGWTGLICNETCPPDTFG-----KNCSFSCSC 570
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
+ G G CDS+TG C C G NCE C GYYG
Sbjct: 571 QN-G----GTCDSVTGACRCPPGVSGTNCEDGCPKGYYG 604
Score = 149 (57.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 42/123 (34%), Positives = 57/123 (46%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGI-GICDECHDWTTGDH 92
C +C G+ +G D +C +G GV+CS +C C + C HG+ G C C TG+
Sbjct: 714 CGKRCPAGF-QGE-DCGQECPVGTFGVNCSSSCSCGG-APC-HGVTGQC-RCPPGRTGED 768
Query: 93 CQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP-G 150
C+ C G +G QE C C H CD TG C+C G C+ P G
Sbjct: 769 CEADCPEGRWGLGC-QEICPACQ---HAAR----CDPETGACLCLPGFVGSRCQDVCPAG 820
Query: 151 YYG 153
+YG
Sbjct: 821 WYG 823
Score = 144 (55.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 42/137 (30%), Positives = 53/137 (38%)
Query: 31 ASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTG 90
+ LC C GY GP QC G G C C C + + C H G C W G
Sbjct: 886 SGLCL--CEAGYV-GPRCEQ-QCPQGHFGPGCEQRCQCQHGAACDHVSGACTCPAGWR-G 940
Query: 91 DHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCL 148
C++ C AG +G DC S N G CD++ G C+C +G C
Sbjct: 941 TFCEHACPAGFFG----------LDCRSACNCTAGAACDAVNGSCLCPAGRRGPRCAETC 990
Query: 149 PGYYGDPTDGGTCYYQC 165
P + T G C C
Sbjct: 991 PAH----TYGHNCSQAC 1003
Score = 141 (54.7 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 41/132 (31%), Positives = 55/132 (41%)
Query: 51 CQCELGWTGV-------------DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY-C 96
C C GWTG+ +CS +C C N TC G C C +G +C+ C
Sbjct: 540 CDCPEGWTGLICNETCPPDTFGKNCSFSCSCQNGGTCDSVTGAC-RCPPGVSGTNCEDGC 598
Query: 97 RAGSYGNATTQEGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYGD 154
G YG + CRK C+C + G C + G C+C G+ C C P +G
Sbjct: 599 PKGYYG-----KHCRKKCNCANRGR-----CHRLYGACLCDPGLYGRFCHLTCPPWAFG- 647
Query: 155 PTDGGTCYYQCM 166
P C QC+
Sbjct: 648 PGCSEEC--QCV 657
Score = 141 (54.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 43/135 (31%), Positives = 59/135 (43%)
Query: 31 ASLCYN--KC--IYGYCKGPPDY---SC--QCELGWTGVDCSVNCLCNNHSTCVHGIGIC 81
A C+N C ++G C P + SC C G G +C +CLC N TC G C
Sbjct: 1002 ACACFNGASCDPVHGQCHCAPGWMGPSCLQACPAGLYGDNCRHSCLCQNGGTCDPVSGHC 1061
Query: 82 DECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C + G C+ C + GCR +S G G+CD TG C+C
Sbjct: 1062 -ACPEGWAGLACEKECLPRD-----VRAGCR----HSGGCLNGGLCDPHTGRCLCPAGWT 1111
Query: 141 GKNCER-CLPGYYGD 154
G C+ CL G++G+
Sbjct: 1112 GDKCQSPCLRGWFGE 1126
Score = 136 (52.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 29 FNASLCYN--KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIG 79
F+ S C N C + G C+ PP S C+ C G+ G C C C N C G
Sbjct: 566 FSCS-CQNGGTCDSVTGACRCPPGVSGTNCEDGCPKGYYGKHCRKKCNCANRGRCHRLYG 624
Query: 80 ICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDC-NSHGNSVLGVCDSITGECICQD 137
C C G C C ++G ++E C C H S CD G C C+
Sbjct: 625 AC-LCDPGLYGRFCHLTCPPWAFGPGCSEE----CQCVQPHTQS----CDKRDGSCSCKA 675
Query: 138 NTQGKNCE-RCLPGYYG 153
+G+ C+ C GY+G
Sbjct: 676 GFRGERCQAECELGYFG 692
Score = 135 (52.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 39/105 (37%), Positives = 49/105 (46%)
Query: 53 CELGWTGVDCSVNCLCNNHSTC--VHGIGICDECH---DWTTGDHC-QYCRAGSYGNATT 106
C G +CS C C N ++C VHG +CH W G C Q C AG YG
Sbjct: 990 CPAHTYGHNCSQACACFNGASCDPVHG-----QCHCAPGWM-GPSCLQACPAGLYG---- 1039
Query: 107 QEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLP 149
+ CR C C + G G CD ++G C C + G CE+ CLP
Sbjct: 1040 -DNCRHSCLCQN-G----GTCDPVSGHCACPEGWAGLACEKECLP 1078
Score = 130 (50.8 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 42/138 (30%), Positives = 56/138 (40%)
Query: 39 IYGYCKGPP-----DYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDH 92
+ G C+ PP D C G G+ C C C + + C G C C G
Sbjct: 754 VTGQCRCPPGRTGEDCEADCPEGRWGLGCQEICPACQHAARCDPETGAC-LCLPGFVGSR 812
Query: 93 CQ-YCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLP 149
CQ C AG YG + C+ +C C + G+ C TG C C G +C+R C
Sbjct: 813 CQDVCPAGWYGPS-----CQTRCSCANDGH-----CHPATGHCSCAPGWTGFSCQRACDT 862
Query: 150 GYYGDPTDGGTCYYQCMA 167
G++G P C C A
Sbjct: 863 GHWG-PDCSHPC--NCSA 877
Score = 130 (50.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 49/159 (30%), Positives = 55/159 (34%)
Query: 38 CIYGYCKGPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
C GY GP SCQ C G G C C C N +C G C C G C
Sbjct: 1193 CAAGY-HGP---SCQQRCPPGRYGPGCEQLCGCLNGGSCDAATGAC-RCPTGFLGTDCNL 1247
Query: 96 -CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
C G +G T C C G CD +TG C+C G CER P
Sbjct: 1248 TCPQGRFGPNCTHV----CGCGQ-G----AACDPVTGTCLCPPGRAGVRCERGCP----Q 1294
Query: 155 PTDGGTCYYQCMAR-GMLTGPGPQGLGSGLAERNAWEGK 192
G C + C R G L GL W G+
Sbjct: 1295 NRFGVGCEHTCSCRNGGLCHASNGSCSCGLG----WTGR 1329
Score = 125 (49.1 bits), Expect = 0.00036, P = 0.00036
Identities = 34/112 (30%), Positives = 46/112 (41%)
Query: 39 IYGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
I G C P + C+ CE G G C C C+ + C G+C C +G C
Sbjct: 1402 ISGRCLCPAGFHGHFCERGCEPGSFGEGCHQRCDCDGGAPCDPVTGLC-LCPPGRSGATC 1460
Query: 94 QY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
CR G +G + T CDC + CD ++G+C C D G C
Sbjct: 1461 NLDCRRGQFGPSCTLH----CDCGGGAD-----CDPVSGQCHCVDGYMGPTC 1503
Score = 120 (47.3 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 37/118 (31%), Positives = 49/118 (41%)
Query: 43 CK-GPPDYSCQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDE-CHDWTTGDHC-QYCR 97
CK G CQ CELG+ G C C C C G C + C G+ C Q C
Sbjct: 673 CKAGFRGERCQAECELGYFGPGCWQACTCPVGVACDSVSGECGKRCPAGFQGEDCGQECP 732
Query: 98 AGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYG 153
G++G N ++ C C C +TG+C C G++CE C G +G
Sbjct: 733 VGTFGVNCSSS-----CSCGG------APCHGVTGQCRCPPGRTGEDCEADCPEGRWG 779
Score = 103 (41.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 34/107 (31%), Positives = 44/107 (41%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDE-CHDWTTGDHC-QYCRAGSYG-NATTQE 108
+CELG+ G C C C C G C + C G+ C Q C G++G N ++
Sbjct: 685 ECELGYFGPGCWQACTCPVGVACDSVSGECGKRCPAGFQGEDCGQECPVGTFGVNCSSSC 744
Query: 109 GCRKCDCNSHGNSVLGVC---DSITGE-CI--CQDNTQGKNCERCLP 149
C C HG V G C TGE C C + G C+ P
Sbjct: 745 SCGGAPC--HG--VTGQCRCPPGRTGEDCEADCPEGRWGLGCQEICP 787
Score = 100 (40.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 35/120 (29%), Positives = 47/120 (39%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDE-CHDWTTGDH 92
C ++C+ P Y C+C+ G+ S CL N +C G G C C T H
Sbjct: 172 CQHRCV----NTPGSYLCECKPGFRLHTDSRTCLAIN--SCALGNGGCQHHCVQLTITRH 225
Query: 93 -CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQ----GKNCE 145
CQ CR G + R+ C + S + C + G C C Q GK CE
Sbjct: 226 RCQ-CRPGFQLQEDGRHCVRRSPCANRNGSCMHRCQVVRGLARCECHVGYQLAADGKACE 284
Score = 77 (32.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 300 SCPDKCP-ENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C C C + QC CPP RTG DC+ + CP
Sbjct: 739 NCSSSCSCGGAPCHGVTGQCRCPPGRTGEDCEAD-CP 774
Score = 70 (29.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C C +N C+CP R GP C E CP
Sbjct: 962 CTAGAACDAVNGSCLCPAGRRGPRCAET-CP 991
Score = 70 (29.7 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 25/82 (30%), Positives = 32/82 (39%)
Query: 304 KC-PENRTC------INNQC--VCPPRRTGPDCQEEI-CPNE--CHEFLNHGTCDLLLTG 351
+C PE C + ++C VCP GP CQ C N+ CH H +C TG
Sbjct: 794 RCDPETGACLCLPGFVGSRCQDVCPAGWYGPSCQTRCSCANDGHCHPATGHCSCAPGWTG 853
Query: 352 VHITHG-RTLHYQVDLIR-CTC 371
T H+ D C C
Sbjct: 854 FSCQRACDTGHWGPDCSHPCNC 875
Score = 69 (29.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
CP C + C CPP TG C E+ CP
Sbjct: 1134 CPPGAACHHVTGACRCPPGFTGSGC-EQACP 1163
Score = 69 (29.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 19/54 (35%), Positives = 22/54 (40%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNE---CHEFLNHGTCDLLLTGVH 353
+CP T + CPP G DC + CP E CH GTC G H
Sbjct: 1148 RCPPGFTGSGCEQACPPGSFGEDCAQMCQCPGENPACHPAT--GTCSCA-AGYH 1198
Score = 68 (29.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 19/52 (36%), Positives = 24/52 (46%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP-----NEC-HEFL--NHGTCD 346
C +C ++ QC C P GP C + CP + C H L N GTCD
Sbjct: 1005 CFNGASCDPVHGQCHCAPGWMGPSCLQA-CPAGLYGDNCRHSCLCQNGGTCD 1055
Score = 68 (29.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP-NECHEFLNHGTCDLLLTGV-HITHG 357
C + C + C+CPP R G C E CP N H TC G+ H ++G
Sbjct: 1264 CGQGAACDPVTGTCLCPPGRAGVRC-ERGCPQNRFGVGCEH-TCSCRNGGLCHASNG 1318
Score = 67 (28.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CPP R GP C E++C C LN G+CD
Sbjct: 1206 CPPGRYGPGC-EQLCG--C---LNGGSCD 1228
Score = 66 (28.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEICP 333
+CP RT + + CP R G CQE ICP
Sbjct: 759 RCPPGRTGEDCEADCPEGRWGLGCQE-ICP 787
Score = 65 (27.9 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNE----C-HE--FLNHGTCD 346
C TC ++ C CP G C++E P + C H LN G CD
Sbjct: 1048 CQNGGTCDPVSGHCACPEGWAGLACEKECLPRDVRAGCRHSGGCLNGGLCD 1098
Score = 59 (25.8 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 17/61 (27%), Positives = 23/61 (37%)
Query: 300 SCPDKCP--ENRTC--INNQCVCPPRRTGPDCQEEI--------CPNECHEFLNHGTCDL 347
SC +C + C C C P TG CQ C + C+ HG+CD
Sbjct: 825 SCQTRCSCANDGHCHPATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDA 884
Query: 348 L 348
+
Sbjct: 885 I 885
Score = 55 (24.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+ CPP R G C E C CH N+ TC+
Sbjct: 1332 ELACPPGRYGAACHLE-C--SCH---NNSTCE 1357
Score = 53 (23.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDC 327
C C + C+CPP R+G C
Sbjct: 1436 CDGGAPCDPVTGLCLCPPGRSGATC 1460
Score = 51 (23.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 305 CPENRTC--INNQCV--CPPRRTGPDCQEEICP 333
CP C ++ +C CP G DC +E CP
Sbjct: 701 CPVGVACDSVSGECGKRCPAGFQGEDCGQE-CP 732
Score = 51 (23.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 300 SCPDKCPENR-TC--INNQCVCPPRRTGPDCQEEICP 333
S P C +C I+ C+C GP C+++ CP
Sbjct: 870 SHPCNCSAGHGSCDAISGLCLCEAGYVGPRCEQQ-CP 905
Score = 50 (22.7 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEE 330
C CPE R + Q +CP + C E
Sbjct: 769 CEADCPEGRWGLGCQEICPACQHAARCDPE 798
Score = 49 (22.3 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 304 KCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
+C C ++ C CP G C E CP
Sbjct: 918 QCQHGAACDHVSGACTCPAGWRGTFC-EHACP 948
Score = 48 (22.0 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
C C I+ +C+CP G C+ P E H CD
Sbjct: 1393 CQHGAPCDPISGRCLCPAGFHGHFCERGCEPGSFGEGC-HQRCD 1435
Score = 48 (22.0 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 318 CPPRRTGPDCQEE 330
CPP GP C EE
Sbjct: 641 CPPWAFGPGCSEE 653
Score = 47 (21.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEIC 332
+CP + CP R GP+C +C
Sbjct: 1235 RCPTGFLGTDCNLTCPQGRFGPNCTH-VC 1262
Score = 46 (21.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 17/52 (32%), Positives = 18/52 (34%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICPNECHE-------FLNHGT-CD 346
C N TC C C P G C E CP H + HG CD
Sbjct: 1350 CHNNSTCEPATGTCRCGPGFYGQAC-EHPCPPGFHGAGCQGLCWCQHGAPCD 1400
Score = 44 (20.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQE 329
C C ++ QC C GP C+E
Sbjct: 1479 CGGGADCDPVSGQCHCVDGYMGPTCRE 1505
Score = 44 (20.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 315 QCVCPPRRTGPDCQ 328
+C+CP TG CQ
Sbjct: 1103 RCLCPAGWTGDKCQ 1116
Score = 41 (19.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTG 324
C CP+NR + + C R G
Sbjct: 1288 CERGCPQNRFGVGCEHTCSCRNGG 1311
Score = 39 (18.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 10/31 (32%), Positives = 11/31 (35%)
Query: 305 CPENRTC--INNQCVCPPRRTGPDCQEEICP 333
C +C C CP G DC CP
Sbjct: 1221 CLNGGSCDAATGACRCPTGFLGTDCNLT-CP 1250
>UNIPROTKB|F1PQB7 [details] [associations]
symbol:ODZ2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 GO:GO:0016021 GO:GO:0007165 Gene3D:2.120.10.30
InterPro:IPR011042 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR008969 SUPFAM:SSF49464
InterPro:IPR006530 TIGRFAMs:TIGR01643 GeneTree:ENSGT00660000095277
InterPro:IPR022385 TIGRFAMs:TIGR03696 OMA:GHLFQKS EMBL:AAEX03003032
EMBL:AAEX03003033 Ensembl:ENSCAFT00000027184 Uniprot:F1PQB7
Length = 2603
Score = 138 (53.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIGICDECHDWTTGDHC 93
C G YS CQC GW G +C V C+ C H +C+ G +C + G+HC
Sbjct: 449 CSGNGQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYK---GEHC 505
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ + C C+SHG VC + GEC+C G NCE
Sbjct: 506 E------------EVDCLDPTCSSHG-----VC--VNGECLCSPGWGGLNCE 538
Score = 138 (53.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 46/155 (29%), Positives = 61/155 (39%)
Query: 34 CYNKCIYGYCKGPPDYS-CQCELGWTGVDCSVN-CL--CNNHSTCVHGIGICDE------ 83
C ++C G+ PD C C+ W G DCSV C C H C+ G C+E
Sbjct: 544 CPDQCS-GHGTYVPDTGLCSCDPNWMGPDCSVEVCSVDCGTHGVCIGGACRCEEGWTGAA 602
Query: 84 -----CHD-----WTTGD-HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
CH T D C+ CR G G T +GC CN +G LG + +
Sbjct: 603 CDQRVCHPRCIEHGTCKDGKCE-CREGWNGEHCTIDGCPDL-CNGNGRCTLG---QNSWQ 657
Query: 133 CICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCM 166
C+CQ +G C + D D G C+
Sbjct: 658 CVCQTGWRGPGCNVAMETSCADNKDNEGDGLVDCL 692
Score = 102 (41.0 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G N CPD+C + T + + C C P GPDC E+C +C HG C
Sbjct: 534 GLNCELARVQCPDQCSGHGTYVPDTGLCSCDPNWMGPDCSVEVCSVDCG---THGVC 587
Score = 100 (40.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 33/106 (31%), Positives = 43/106 (40%)
Query: 51 CQCELGWTGVDCS---VNC--LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT 105
C C GW G++C V C C+ H T V G+C +W G C
Sbjct: 526 CLCSPGWGGLNCELARVQCPDQCSGHGTYVPDTGLCSCDPNWM-GPDCSV---------- 574
Query: 106 TQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER--CLP 149
E C DC +HG VC I G C C++ G C++ C P
Sbjct: 575 --EVC-SVDCGTHG-----VC--IGGACRCEEGWTGAACDQRVCHP 610
Score = 82 (33.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C + CI C C TG C + +C C E HGTC
Sbjct: 577 CSVDCGTHGVCIGGACRCEEGWTGAACDQRVCHPRCIE---HGTC 618
Score = 75 (31.5 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDL 347
C +C E+ TC + +C C G C + CP+ C+ +G C L
Sbjct: 608 CHPRCIEHGTCKDGKCECREGWNGEHCTIDGCPDLCN---GNGRCTL 651
Score = 73 (30.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 284 KQGKPS--EGFNATY-QIFSCPDKCPENRTCI---NN-QCVCPPRRTGPDC 327
K GK EG+N + I CPD C N C N+ QCVC GP C
Sbjct: 619 KDGKCECREGWNGEHCTIDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGC 669
>RGD|1309399 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0007601 "visual perception" evidence=ISO] [GO:0014002
"astrocyte development" evidence=ISO] [GO:0060041 "retina
development in camera-type eye" evidence=ISO] RGD:1309399
GO:GO:0007601 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 OrthoDB:EOG498TZW EMBL:AC105586 IPI:IPI00950417
Ensembl:ENSRNOT00000066978 UCSC:RGD:1309399 ArrayExpress:D3ZYW4
Uniprot:D3ZYW4
Length = 1580
Score = 192 (72.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 46/129 (35%), Positives = 62/129 (48%)
Query: 47 PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNA-T 105
P CQC VD + C+ HS G C C TTG HC++C+ G YG+A
Sbjct: 818 PCRRCQCS---RNVDLNAVGNCDPHS------GRCLRCLHNTTGAHCEHCQEGFYGSALA 868
Query: 106 TQ--EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYY 163
T+ + C C C+ G+S C+ TG+C C G++C RC PG+Y D G C
Sbjct: 869 TRPADKCAPCSCDPRGSSSQKTCNPATGQCACLPYVTGRDCSRCSPGFY-DLQPGRGCQS 927
Query: 164 -QCMARGML 171
+C G L
Sbjct: 928 CKCHPVGSL 936
Score = 169 (64.5 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 43/142 (30%), Positives = 63/142 (44%)
Query: 38 CIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
C Y + P CQ C+ G S++ C+N TC C TG C C
Sbjct: 376 CEKNYYRWDPKTPCQPCDCHPAG---SLSLQCDNSGTC--------PCKLTVTGWKCDRC 424
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG--- 153
G + + ++ GCR C CN G+ LG CD +G C C++N +G C+RC PG +
Sbjct: 425 LPGFH--SLSEGGCRPCTCNVAGS--LGTCDPRSGNCPCKENVEGGLCDRCRPGTFNLQP 480
Query: 154 -DPTDGGTCYYQCMARGMLTGP 174
+P +C+ C + P
Sbjct: 481 HNPAGCSSCF--CYGHSKVCAP 500
Score = 169 (64.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 46/142 (32%), Positives = 66/142 (46%)
Query: 61 DCSVNCLCNNHST-CV----------HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG 109
+C + C C+ HS C HG G C C D T G HC++C Y +
Sbjct: 332 EC-LPCNCSGHSEECTFDRELYRSTGHG-GHCQRCRDHTAGPHCEHCEKNYY-RWDPKTP 388
Query: 110 CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARG 169
C+ CDC+ G+ L CD+ +G C C+ G C+RCLPG++ ++GG C G
Sbjct: 389 CQPCDCHPAGSLSLQ-CDN-SGTCPCKLTVTGWKCDRCLPGFHS-LSEGGCRPCTCNVAG 445
Query: 170 MLTGPGPQGLGSGLAERNAWEG 191
L P+ G+ + N EG
Sbjct: 446 SLGTCDPRS-GNCPCKENV-EG 465
Score = 165 (63.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 36/110 (32%), Positives = 51/110 (46%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT-- 106
Y + G +C + C CN H TC GIC C T G C+ C G YGNA +
Sbjct: 703 YKREIPHGGPYTNC-IPCTCNQHGTCDPNTGIC-LCGHHTEGPSCERCMPGFYGNAFSGH 760
Query: 107 QEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDP 155
+ C+ C C ++ + +S C C +G+ CE C G++GDP
Sbjct: 761 ADDCQPCPCPGQ-SACTTIPESRDVVCTHCPPGQRGRRCESCEDGFFGDP 809
Score = 160 (61.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 31/79 (39%), Positives = 40/79 (50%)
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C TG C++C G Y G C C CN HG CD TG C+C +T
Sbjct: 687 CPQGYTGQFCEFCALG-YKREIPHGGPYTNCIPCTCNQHGT-----CDPNTGICLCGHHT 740
Query: 140 QGKNCERCLPGYYGDPTDG 158
+G +CERC+PG+YG+ G
Sbjct: 741 EGPSCERCMPGFYGNAFSG 759
Score = 156 (60.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 42/135 (31%), Positives = 61/135 (45%)
Query: 38 CIYGY-CKGPPDYSCQ-CELGWTGV-------DCSVNCLCNNHSTCV----HGIGICDEC 84
C+ G+ +GP SC+ C G+ G DC C C S C +C C
Sbjct: 734 CLCGHHTEGP---SCERCMPGFYGNAFSGHADDCQP-CPCPGQSACTTIPESRDVVCTHC 789
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI-CQDN 138
G C+ C G +G+ G CR+C C+ + + + +G CD +G C+ C N
Sbjct: 790 PPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSRNVDLNAVGNCDPHSGRCLRCLHN 849
Query: 139 TQGKNCERCLPGYYG 153
T G +CE C G+YG
Sbjct: 850 TTGAHCEHCQEGFYG 864
Score = 140 (54.3 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS 128
++ TC G C C + TG C C G Y + GC+ C C+ G S+ C
Sbjct: 886 SSQKTCNPATGQC-ACLPYVTGRDCSRCSPGFY-DLQPGRGCQSCKCHPVG-SLENKCHP 942
Query: 129 ITGECICQDNTQGKNCERCLPGYYG 153
TG+C C+ G+ C+RC G++G
Sbjct: 943 KTGQCPCRPGVTGQACDRCQLGFFG 967
Score = 55 (24.4 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 300 SC-PDKCPENRTC--INNQCVCPPRRTGPDC 327
SC P +TC QC C P TG DC
Sbjct: 879 SCDPRGSSSQKTCNPATGQCACLPYVTGRDC 909
Score = 52 (23.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 300 SC-PDKCPENRTCINNQ--CVCPPRRTGPDCQ 328
+C P C ++ TC N C+C GP C+
Sbjct: 715 NCIPCTCNQHGTCDPNTGICLCGHHTEGPSCE 746
Score = 42 (19.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHG 343
C+CP TG C E C + HG
Sbjct: 685 CLCPQGYTGQFC--EFCALGYKREIPHG 710
Score = 41 (19.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 301 CPDK--C---PENRTCINNQCV-CPPRRTGPDCQ 328
CP + C PE+R + C CPP + G C+
Sbjct: 769 CPGQSACTTIPESRDVV---CTHCPPGQRGRRCE 799
Score = 40 (19.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 287 KPSEGFNAT--YQIFSCPDKCPENRTCINNQCVCPPRRTGPDC 327
+P G + + + S +KC +T QC C P TG C
Sbjct: 920 QPGRGCQSCKCHPVGSLENKC-HPKT---GQCPCRPGVTGQAC 958
Score = 39 (18.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 313 NNQCVCPPRRTGPDC 327
N+ CVC P G C
Sbjct: 991 NSTCVCRPGFVGYKC 1005
>UNIPROTKB|E1BDK6 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:DAAA02054428 IPI:IPI00904771 UniGene:Bt.7183
Ensembl:ENSBTAT00000057452 NextBio:20873039 ArrayExpress:E1BDK6
Uniprot:E1BDK6
Length = 1802
Score = 180 (68.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 44/136 (32%), Positives = 60/136 (44%)
Query: 52 QCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG- 109
+C+ G G C+C+ H+ C G C C D T G+HC+ C AG +G+ G
Sbjct: 867 RCQRGQWGFPSCRPCVCHGHADECDPNTGTCLGCRDHTGGEHCERCIAGFHGDPRLPYGG 926
Query: 110 -CRKCDCNSHGNS---VLGVC--DSITGE--CICQDNTQGKNCERCLPGYYGDPT-DGGT 160
CR C C S C D + + C C+ G CE C PG++GDP+ GG
Sbjct: 927 QCRPCPCPEGPGSRRHFATSCHRDGYSQQVVCHCRAGYTGLRCEACAPGHFGDPSRPGGG 986
Query: 161 CYYQCMARGMLTGPGP 176
C C G + P
Sbjct: 987 CQ-PCECSGNIDPTDP 1001
Score = 171 (65.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 33/90 (36%), Positives = 46/90 (51%)
Query: 68 CNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVLG 124
C+ H G+ G C C + G CQ CR G +G +A GC++C C+ G G
Sbjct: 427 CDPHDDPALGLVSGQC-RCKEHVVGSRCQQCRDGFFGLSANNPLGCQRCQCDPRGTVPGG 485
Query: 125 V-CDSITGECICQDNTQGKNCERCLPGYYG 153
CD +G C C+ G+ C RCLPG++G
Sbjct: 486 TPCDRNSGACFCKRLVTGQGCNRCLPGHWG 515
Score = 165 (63.1 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 44/149 (29%), Positives = 65/149 (43%)
Query: 49 YSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
++C+ CE C + S V G G+CD C T G C+ CR Y + T
Sbjct: 346 HACKKCECHGHAHSCHFDMAIYLASGNVSG-GVCDGCQHNTAGRQCELCRPFFYRDPTKD 404
Query: 108 ----EGCRKCDCNSHGNSVLGVCDS--------ITGECICQDNTQGKNCERCLPGYYGDP 155
CR CDC+ G+ G CD ++G+C C+++ G C++C G++G
Sbjct: 405 LRDPAVCRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLS 464
Query: 156 TDG--GTCYYQCMARGMLTGPGPQGLGSG 182
+ G QC RG + G P SG
Sbjct: 465 ANNPLGCQRCQCDPRGTVPGGTPCDRNSG 493
Score = 162 (62.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 44/134 (32%), Positives = 62/134 (46%)
Query: 43 CKGPPDYSCQCEL---GWTG---VDCSVNCLCNNHSTCVHGIGICDE------CHDWTTG 90
CK P +C+L G+ G C C C+ G+CD C G
Sbjct: 808 CK-PAVVGRRCDLCAPGYYGFGPTGCQA-CQCSPEGALS---GLCDATSGQCPCRAGAFG 862
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLP 149
C C+ G +G + CR C C+ H + CD TG C+ C+D+T G++CERC+
Sbjct: 863 LRCDRCQRGQWGFPS----CRPCVCHGHADE----CDPNTGTCLGCRDHTGGEHCERCIA 914
Query: 150 GYYGDPT--DGGTC 161
G++GDP GG C
Sbjct: 915 GFHGDPRLPYGGQC 928
Score = 161 (61.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 43/134 (32%), Positives = 58/134 (43%)
Query: 38 CIYGYCKGP--PDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
C G+ P P CQ CE +D + C+ HS G C C T G C
Sbjct: 972 CAPGHFGDPSRPGGGCQPCECSGN-IDPTDPDACDPHS------GQCLHCLYHTEGPRCA 1024
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGV-------CDSITGECICQDNTQGKNCERC 147
+C+ G +G A Q C +C CN G CD +G+C C N QG +C+RC
Sbjct: 1025 HCKPGFHGQAARQS-CHRCTCNLLGTDARQCPSTDHCNCDPSSGQCPCLPNVQGLSCDRC 1083
Query: 148 LPGYYGDPTDGGTC 161
P ++ + T G C
Sbjct: 1084 APNFW-NLTSGRGC 1096
Score = 152 (58.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 35/112 (31%), Positives = 51/112 (45%)
Query: 52 QCELGWTGVDCS-----VNCLCNNHST------CVHGIGICDECHDWTTGDHCQYCRAGS 100
QC G+ G+ + C C+ T C G C C TG C C G
Sbjct: 455 QCRDGFFGLSANNPLGCQRCQCDPRGTVPGGTPCDRNSGACF-CKRLVTGQGCNRCLPGH 513
Query: 101 YGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
+G + GCR CDC+ G ++ C+ TG+C C+ + G+ CE+ PGY+
Sbjct: 514 WGLSHDLLGCRPCDCDI-GGALDPQCNEATGQCRCRQHMVGRRCEQVQPGYF 564
Score = 151 (58.2 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 45/150 (30%), Positives = 61/150 (40%)
Query: 26 LYIFNASLCYNKCIYGYCKGPPDYSC-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
LY C + C G+ SC +C G D C +H C G C C
Sbjct: 1015 LYHTEGPRCAH-CKPGFHGQAARQSCHRCTCNLLGTDAR-QCPSTDHCNCDPSSGQCP-C 1071
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG-VCDSITGECICQDNTQGKN 143
G C C A ++ N T+ GC+ C C H + G C+ TG+C C+ G+
Sbjct: 1072 LPNVQGLSCDRC-APNFWNLTSGRGCQPCAC--HPSRARGPACNEFTGQCHCRAGFGGRT 1128
Query: 144 CERCLPGYYGDPTDGGTCYY-QCMARGMLT 172
C C ++GDP G C C RG+ T
Sbjct: 1129 CSECQELHWGDP--GLQCRACDCDPRGIDT 1156
Score = 122 (48.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 25/66 (37%), Positives = 33/66 (50%)
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGTCYYQCMA 167
G C C+ G S+ C+ G+C C+ G+ C+ C PGYYG PT C QC
Sbjct: 783 GALPCQCDPQG-SLSSECNPHGGQCRCKPAVVGRRCDLCAPGYYGFGPTGCQAC--QCSP 839
Query: 168 RGMLTG 173
G L+G
Sbjct: 840 EGALSG 845
Score = 53 (23.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 18/49 (36%), Positives = 20/49 (40%)
Query: 297 QIFSCPDKCPEN-------RTCINNQCVCPPRRT-GPDCQEEICPNECH 337
Q SC D+C N R C C C P R GP C E +CH
Sbjct: 1076 QGLSC-DRCAPNFWNLTSGRGC--QPCACHPSRARGPACNE--FTGQCH 1119
Score = 44 (20.5 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 304 KCPENRTC----INNQCVCPPRRTGPDCQEEICPN 334
+CP C + QC C P G C + PN
Sbjct: 1053 QCPSTDHCNCDPSSGQCPCLPNVQGLSC-DRCAPN 1086
Score = 38 (18.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGV 352
C C PR G D P +CH H +C ++GV
Sbjct: 1147 CDCDPR--GIDT-----P-QCHRSTGHCSCRPGVSGV 1175
>UNIPROTKB|F1RR76 [details] [associations]
symbol:ODZ2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 GO:GO:0016021 GO:GO:0007165 Gene3D:2.120.10.30
InterPro:IPR011042 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR008969 SUPFAM:SSF49464
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR006530
TIGRFAMs:TIGR01643 GeneTree:ENSGT00660000095277 InterPro:IPR022385
TIGRFAMs:TIGR03696 OMA:GHLFQKS EMBL:AEMK01193993 EMBL:CU928729
EMBL:CU929911 EMBL:FP102321 Ensembl:ENSSSCT00000018530
Uniprot:F1RR76
Length = 2534
Score = 138 (53.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIGICDECHDWTTGDHC 93
C G YS CQC GW G +C V C+ C H +C+ G +C + G+HC
Sbjct: 375 CSGNGQYSKGTCQCYSGWKGAECDVPLNQCIDPSCGGHGSCIDGNCVCSAGYK---GEHC 431
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ + C C+SHG VC + GEC+C G NCE
Sbjct: 432 E------------EVDCLDPTCSSHG-----VC--VNGECLCSPGWGGLNCE 464
Score = 137 (53.3 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 46/155 (29%), Positives = 61/155 (39%)
Query: 34 CYNKCIYGYCKGPPDYS-CQCELGWTGVDCSVN-CL--CNNHSTCVHGIGICDE------ 83
C ++C G+ PD C C+ W G DCSV C C H C+ G C+E
Sbjct: 470 CPDQCS-GHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCGTHGVCIGGACRCEEGWTGAA 528
Query: 84 -----CHD-----WTTGD-HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
CH T D C+ CR G G T +GC CN +G LG + +
Sbjct: 529 CDQRVCHPRCIEHGTCKDGKCE-CREGWNGEHCTIDGCPDL-CNGNGRCTLG---QNSWQ 583
Query: 133 CICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCM 166
C+CQ +G C + D D G C+
Sbjct: 584 CVCQTGWRGPGCNVAMETSCADNKDNEGDGLVDCL 618
Score = 101 (40.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G N CPD+C + T + + C C P GPDC E+C +C HG C
Sbjct: 460 GLNCELARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCG---THGVC 513
Score = 82 (33.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C + CI C C TG C + +C C E HGTC
Sbjct: 503 CSVDCGTHGVCIGGACRCEEGWTGAACDQRVCHPRCIE---HGTC 544
Score = 75 (31.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDL 347
C +C E+ TC + +C C G C + CP+ C+ +G C L
Sbjct: 534 CHPRCIEHGTCKDGKCECREGWNGEHCTIDGCPDLCN---GNGRCTL 577
Score = 73 (30.8 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 284 KQGKPS--EGFNATY-QIFSCPDKCPENRTCI---NN-QCVCPPRRTGPDC 327
K GK EG+N + I CPD C N C N+ QCVC GP C
Sbjct: 545 KDGKCECREGWNGEHCTIDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGC 595
>UNIPROTKB|F8VNQ3 [details] [associations]
symbol:TENM2 "Teneurin-2" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 GO:GO:0016021 GO:GO:0007165 Gene3D:2.120.10.30
InterPro:IPR011042 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR008969 SUPFAM:SSF49464 EMBL:AC026689
InterPro:IPR006530 TIGRFAMs:TIGR01643 InterPro:IPR022385
TIGRFAMs:TIGR03696 EMBL:AC008464 EMBL:AC008601 EMBL:AC008634
EMBL:AC008637 EMBL:AC008642 EMBL:AC008705 EMBL:AC008708
EMBL:AC011369 EMBL:AC011384 EMBL:AC091820 EMBL:AC093304
EMBL:AC113372 HGNC:HGNC:29943 ChiTaRS:ODZ2 IPI:IPI00984227
ProteinModelPortal:F8VNQ3 Ensembl:ENST00000520394 UCSC:uc003lzr.4
ArrayExpress:F8VNQ3 Bgee:F8VNQ3 Uniprot:F8VNQ3
Length = 2535
Score = 153 (58.9 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 44/142 (30%), Positives = 60/142 (42%)
Query: 30 NASLCYNKC-IYGYCKGPPDYSCQCELGWTGVDCSVN-C--LCNNHSTCVHGIGICDECH 85
+ +C C +G C G +C+CE GWTG C C C H TC G C EC
Sbjct: 503 SVEVCSVDCGTHGVCIGG---ACRCEEGWTGAACDQRVCHPRCIEHGTCKDGK--C-ECR 556
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ G+HC R + G T +GC CN +G LG + +C+CQ +G C
Sbjct: 557 EGWNGEHCTIGRQTA-GTET--DGCPDL-CNGNGRCTLG---QNSWQCVCQTGWRGPGCN 609
Query: 146 RCLPGYYGDPTDG-GTCYYQCM 166
+ D D G C+
Sbjct: 610 VAMETSCADNKDNEGDGLVDCL 631
Score = 138 (53.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIGICDECHDWTTGDHC 93
C G YS CQC GW G +C V C+ C H +C+ G +C + G+HC
Sbjct: 379 CSGNGQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYK---GEHC 435
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ + C C+SHG VC + GEC+C G NCE
Sbjct: 436 E------------EVDCLDPTCSSHG-----VC--VNGECLCSPGWGGLNCE 468
Score = 101 (40.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G N CPD+C + T + + C C P GPDC E+C +C HG C
Sbjct: 464 GLNCELARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCG---THGVC 517
Score = 90 (36.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 40/140 (28%), Positives = 53/140 (37%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ------YCRA-GSYGNATTQ--EGCR 111
DC NC + + CV G+ C C G C C G Y T Q G +
Sbjct: 343 DCPRNC--HGNGECVSGV--C-HCFPGFLGADCAKAACPVLCSGNGQYSKGTCQCYSGWK 397
Query: 112 KCDCNSHGNSVL-----GVCDSITGECICQDNTQGKNCER--CLPGYYGDPTDGGTCYYQ 164
+C+ N + G I G C+C +G++CE CL DPT +
Sbjct: 398 GAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYKGEHCEEVDCL-----DPTCSS--HGV 450
Query: 165 CMARGMLTGPGPQGLGSGLA 184
C+ L PG GL LA
Sbjct: 451 CVNGECLCSPGWGGLNCELA 470
Score = 82 (33.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C + CI C C TG C + +C C E HGTC
Sbjct: 507 CSVDCGTHGVCIGGACRCEEGWTGAACDQRVCHPRCIE---HGTC 548
Score = 61 (26.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 301 CPDKCPENRTCI---NN-QCVCPPRRTGPDC 327
CPD C N C N+ QCVC GP C
Sbjct: 578 CPDLCNGNGRCTLGQNSWQCVCQTGWRGPGC 608
Score = 55 (24.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDC---------QEEICPNECHEFLNHGTCDL 347
C +C E+ TC + +C C G C + + CP+ C+ +G C L
Sbjct: 538 CHPRCIEHGTCKDGKCECREGWNGEHCTIGRQTAGTETDGCPDLCN---GNGRCTL 590
>UNIPROTKB|A6QP76 [details] [associations]
symbol:PEAR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043654 "recognition of apoptotic cell" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
HOGENOM:HOG000294130 Pfam:PF12661 GeneTree:ENSGT00690000101691
GO:GO:0043654 HOVERGEN:HBG108333 CTD:375033 eggNOG:NOG320509
OMA:PPGTWGF OrthoDB:EOG451DPW EMBL:DAAA02007120 EMBL:BC149186
IPI:IPI00712923 RefSeq:NP_001094770.1 UniGene:Bt.27046
Ensembl:ENSBTAT00000033952 GeneID:787112 KEGG:bta:787112
InParanoid:A6QP76 NextBio:20928268 Uniprot:A6QP76
Length = 1040
Score = 158 (60.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 46/137 (33%), Positives = 53/137 (38%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------------CNNHSTCVHGIG 79
LC +C++G C P CQC W G DCS C C N S+C G
Sbjct: 104 LCAQECVHGRCVAPNQ--CQCVQDWRGDDCSSACAPGVWGPKCDKPCNCGNSSSCDPKSG 161
Query: 80 ICDECHDWTTGDHC-QYCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQD 137
C C HC Q C G YG A C+ C C HG C+ TG C+C
Sbjct: 162 ACS-CPSGLQPPHCLQPCSPGLYGPA-----CQFSCQC--HG----APCNPQTGACLCPP 209
Query: 138 NTQGKNCE-RCLPGYYG 153
G CE C P G
Sbjct: 210 ERTGPTCEVSCSPSSVG 226
Score = 157 (60.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 39/123 (31%), Positives = 53/123 (43%)
Query: 46 PPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICD------ECHDWTTGDH 92
P C C GW G+ C+ +C C H C+HG G+C C TG H
Sbjct: 375 PMSGECSCLPGWAGLHCNESCPQDTHGPGCQEHCLCLHG-GVCQPDSGLCRCAPGYTGPH 433
Query: 93 C-QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPG 150
C C +YG +Q +C C N++ C I G C+C++ Q NC C PG
Sbjct: 434 CASLCPPDTYGVNCSQ----RCSCE---NAI--ACSPIDGTCVCKEGWQRGNCSVPCPPG 484
Query: 151 YYG 153
+G
Sbjct: 485 TWG 487
Score = 151 (58.2 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 48/134 (35%), Positives = 53/134 (39%)
Query: 30 NASLCYN--KCI--YGYCKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGI 80
NA C N CI G C P + CQ C+ G G C V C C NHS+C G
Sbjct: 578 NACACRNGGTCIPKNGNCVCAPGFRGPFCQKSCQPGRYGKRC-VPCKCANHSSCHPSNGT 636
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C WT D Q C G +G Q C C HG G C G C C
Sbjct: 637 CYCLAGWTGPDCSQPCPLGHWGANCAQ----LCQCR-HG----GTCHPQDGSCFCPPGWT 687
Query: 141 GKNC-ERCLPGYYG 153
G C E C PG +G
Sbjct: 688 GHLCLEGCSPGMFG 701
Score = 149 (57.5 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 46/155 (29%), Positives = 60/155 (38%)
Query: 34 CYNKCIYGYCKG--PPDYSCQCELGWTGV-------------DCSVNCLCNNHSTCVHGI 78
C ++C + G P CQC+ GWTG +CS C C N TC+
Sbjct: 533 CASRCDCDHADGCDPVHGHCQCQAGWTGTRCHQPCPEGFWGANCSNACACRNGGTCIPKN 592
Query: 79 GICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C C G CQ C+ G YG C C C +H + C G C C
Sbjct: 593 GNC-VCAPGFRGPFCQKSCQPGRYGKR-----CVPCKCANHSS-----CHPSNGTCYCLA 641
Query: 138 NTQGKNCERCLP-GYYG-------DPTDGGTCYYQ 164
G +C + P G++G GGTC+ Q
Sbjct: 642 GWTGPDCSQPCPLGHWGANCAQLCQCRHGGTCHPQ 676
Score = 145 (56.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 55/170 (32%), Positives = 69/170 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCL-------CNNHSTCVHGIGICD 82
NAS C +C + P +C C GW G +C + C C + C H G CD
Sbjct: 491 NAS-C--QCAHEAACSPQTGACTCTPGWHGTNCQLPCPKGQFGEGCASRCDCDHADG-CD 546
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDC-NSHGNSVLGVCDSITGECICQDN 138
H HCQ C+AG G Q EG +C N+ G C G C+C
Sbjct: 547 PVHG-----HCQ-CQAGWTGTRCHQPCPEGFWGANCSNACACRNGGTCIPKNGNCVCAPG 600
Query: 139 TQGKNCER-CLPGYYGD---PT----------DGGTCYYQCMARGMLTGP 174
+G C++ C PG YG P GTCY C+A G TGP
Sbjct: 601 FRGPFCQKSCQPGRYGKRCVPCKCANHSSCHPSNGTCY--CLA-GW-TGP 646
Score = 144 (55.7 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 39/119 (32%), Positives = 49/119 (41%)
Query: 43 CKGPPDYS---CQ--CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC-QYC 96
C PP ++ C C G+ G +CS C C+N C G C C TGD C + C
Sbjct: 248 CSCPPGWTGTICSLPCPEGFHGPNCSQECRCHNGGLCDRFTGQC-RCAPGYTGDRCREEC 306
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERCLP-GYYG 153
G +G Q+ CDC C G C+C+ G C ER P G YG
Sbjct: 307 PVGRFG----QDCAETCDCAPGAR-----CFPANGACLCEHGFTGDRCAERLCPDGLYG 356
Score = 142 (55.0 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 45/144 (31%), Positives = 57/144 (39%)
Query: 30 NASLCYNKCIYGYCKGPPDYS---C--QCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC 84
N LC G C+ P Y+ C +C +G G DC+ C C + C G C C
Sbjct: 280 NGGLCDR--FTGQCRCAPGYTGDRCREECPVGRFGQDCAETCDCAPGARCFPANGAC-LC 336
Query: 85 HDWTTGDHC--QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGK 142
TGD C + C G YG + Q C CD H S C ++GEC C G
Sbjct: 337 EHGFTGDRCAERLCPDGLYG-LSCQVPCT-CD-PEHSLS----CHPMSGECSCLPGWAGL 389
Query: 143 NCERCLPGYYGDPTDGGTCYYQCM 166
+C P T G C C+
Sbjct: 390 HCNESCP----QDTHGPGCQEHCL 409
Score = 135 (52.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 41/129 (31%), Positives = 54/129 (41%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTC--VHGIGICDECHDW 87
++ LC +C GY GP S C GV+CS C C N C + G +C E W
Sbjct: 419 DSGLC--RCAPGYT-GPHCASL-CPPDTYGVNCSQRCSCENAIACSPIDGTCVCKE--GW 472
Query: 88 TTGDHCQYCRAGSYGNATTQEGCR-KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCER 146
G+ C G++G GC C C +H C TG C C G NC+
Sbjct: 473 QRGNCSVPCPPGTWGF-----GCNASCQC-AHE----AACSPQTGACTCTPGWHGTNCQL 522
Query: 147 -CLPGYYGD 154
C G +G+
Sbjct: 523 PCPKGQFGE 531
Score = 121 (47.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 46/138 (33%), Positives = 57/138 (41%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC--QYCRAGSYGNATTQEG 109
+C +G G DC+ C C + C G C C TGD C + C G YG + Q
Sbjct: 305 ECPVGRFGQDCAETCDCAPGARCFPANGAC-LCEHGFTGDRCAERLCPDGLYG-LSCQVP 362
Query: 110 CRKCD----CNSHGNSVLGVCDSITG----EC--ICQDNTQGKNCER---CLPGYYGDPT 156
C CD + H S G C + G C C +T G C+ CL G P
Sbjct: 363 CT-CDPEHSLSCHPMS--GECSCLPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVCQP- 418
Query: 157 DGGTCYYQCMARGMLTGP 174
D G C +C A G TGP
Sbjct: 419 DSGLC--RC-APGY-TGP 432
Score = 121 (47.7 bits), Expect = 0.00062, P = 0.00062
Identities = 37/112 (33%), Positives = 46/112 (41%)
Query: 34 CYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
CY C+ G+ GP D S C LG G +C+ C C + TC G C C TG C
Sbjct: 637 CY--CLAGWT-GP-DCSQPCPLGHWGANCAQLCQCRHGGTCHPQDGSCF-CPPGWTGHLC 691
Query: 94 -QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
+ C G +G +Q C C G C TG C+C G C
Sbjct: 692 LEGCSPGMFGANCSQP----CQCGP-GER----CHPETGACVCPPGHSGAPC 734
Score = 71 (30.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 22/64 (34%), Positives = 26/64 (40%)
Query: 290 EGFNATYQIFSCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPNE----CH--EFLN 341
EGF +C C TCI N CVC P GP CQ+ P C + N
Sbjct: 569 EGFWGANCSNACA--CRNGGTCIPKNGNCVCAPGFRGPFCQKSCQPGRYGKRCVPCKCAN 626
Query: 342 HGTC 345
H +C
Sbjct: 627 HSSC 630
Score = 69 (29.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 23/66 (34%), Positives = 26/66 (39%)
Query: 302 PDKCPENRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNH--GTCDLLLTGVHITHG 357
P KC + +C N C C TGPDC + CP L H C L HG
Sbjct: 621 PCKCANHSSCHPSNGTCYCLAGWTGPDCSQP-CP------LGHWGANCAQLC---QCRHG 670
Query: 358 RTLHYQ 363
T H Q
Sbjct: 671 GTCHPQ 676
Score = 66 (28.3 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 17/46 (36%), Positives = 20/46 (43%)
Query: 290 EGFNATYQIFSCPDKCPENRTC--INNQCVCPPRRTGPDCQEEICP 333
EGF+ C +C C QC C P TG C+EE CP
Sbjct: 265 EGFHGPNCSQEC--RCHNGGLCDRFTGQCRCAPGYTGDRCREE-CP 307
Score = 61 (26.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 18/47 (38%), Positives = 20/47 (42%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
SC CP T CP GP+C +E C CH N G CD
Sbjct: 247 SC--SCPPGWTGTICSLPCPEGFHGPNCSQE-C--RCH---NGGLCD 285
Score = 59 (25.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 305 CPENRTCI--NNQCVCPPRRTGPDCQEEICPN 334
C C N C+C TG C E +CP+
Sbjct: 321 CAPGARCFPANGACLCEHGFTGDRCAERLCPD 352
Score = 59 (25.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 299 FSCPDKCP-ENRTCIN---NQCVCPPRRTGPDCQEEICPNECH 337
FSCP P +N + C CPP TG C CP H
Sbjct: 227 FSCPSTPPCQNGGVFQASQDSCSCPPGWTGTICSLP-CPEGFH 268
Score = 58 (25.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 300 SC--PDKC-PENR-TC--INNQCVCPPRRTGPDCQEEICPNECH 337
SC P C PE+ +C ++ +C C P G C E CP + H
Sbjct: 358 SCQVPCTCDPEHSLSCHPMSGECSCLPGWAGLHCNES-CPQDTH 400
Score = 54 (24.1 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 300 SCPDKCPENRTCI--NNQCVCPPRRTGPDCQ 328
S P +C C CVCPP +G C+
Sbjct: 705 SQPCQCGPGERCHPETGACVCPPGHSGAPCR 735
Score = 53 (23.7 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 304 KCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
+C TC + C CPP TG C E P
Sbjct: 666 QCRHGGTCHPQDGSCFCPPGWTGHLCLEGCSP 697
Score = 52 (23.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 316 CVCPPRRTGPDCQEEICPNECH 337
C C P TGP C +CP + +
Sbjct: 423 CRCAPGYTGPHCAS-LCPPDTY 443
Score = 45 (20.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 300 SCPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICP 333
SC +C C C C P G +CQ CP
Sbjct: 493 SC--QCAHEAACSPQTGACTCTPGWHGTNCQLP-CP 525
Score = 44 (20.5 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEI-CPNECHEFLNHGTC 345
+C T + +CPP G +C + C N GTC
Sbjct: 424 RCAPGYTGPHCASLCPPDTYGVNCSQRCSCENAIACSPIDGTC 466
Score = 43 (20.2 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 318 CPPRRTGPDCQEE-IC 332
CP GP CQE +C
Sbjct: 395 CPQDTHGPGCQEHCLC 410
>UNIPROTKB|H7BYZ1 [details] [associations]
symbol:TENM2 "Teneurin-2" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 GO:GO:0016021 GO:GO:0007165 Gene3D:2.120.10.30
InterPro:IPR011042 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR008969 SUPFAM:SSF49464 EMBL:AC026689
InterPro:IPR006530 TIGRFAMs:TIGR01643 InterPro:IPR022385
TIGRFAMs:TIGR03696 EMBL:AC008464 EMBL:AC008601 EMBL:AC008634
EMBL:AC008637 EMBL:AC008642 EMBL:AC008705 EMBL:AC008708
EMBL:AC011369 EMBL:AC011384 EMBL:AC091820 EMBL:AC093304
EMBL:AC113372 HGNC:HGNC:29943 ChiTaRS:ODZ2
ProteinModelPortal:H7BYZ1 Ensembl:ENST00000403607 Bgee:H7BYZ1
Uniprot:H7BYZ1
Length = 2598
Score = 138 (53.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIGICDECHDWTTGDHC 93
C G YS CQC GW G +C V C+ C H +C+ G +C + G+HC
Sbjct: 444 CSGNGQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYK---GEHC 500
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ + C C+SHG VC + GEC+C G NCE
Sbjct: 501 E------------EVDCLDPTCSSHG-----VC--VNGECLCSPGWGGLNCE 533
Score = 137 (53.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 46/155 (29%), Positives = 61/155 (39%)
Query: 34 CYNKCIYGYCKGPPDYS-CQCELGWTGVDCSVN-CL--CNNHSTCVHGIGICDE------ 83
C ++C G+ PD C C+ W G DCSV C C H C+ G C+E
Sbjct: 539 CPDQCS-GHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCGTHGVCIGGACRCEEGWTGAA 597
Query: 84 -----CHD-----WTTGD-HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
CH T D C+ CR G G T +GC CN +G LG + +
Sbjct: 598 CDQRVCHPRCIEHGTCKDGKCE-CREGWNGEHCTIDGCPDL-CNGNGRCTLG---QNSWQ 652
Query: 133 CICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCM 166
C+CQ +G C + D D G C+
Sbjct: 653 CVCQTGWRGPGCNVAMETSCADNKDNEGDGLVDCL 687
Score = 101 (40.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G N CPD+C + T + + C C P GPDC E+C +C HG C
Sbjct: 529 GLNCELARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCG---THGVC 582
Score = 90 (36.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 40/140 (28%), Positives = 53/140 (37%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ------YCRA-GSYGNATTQ--EGCR 111
DC NC + + CV G+ C C G C C G Y T Q G +
Sbjct: 408 DCPRNC--HGNGECVSGV--C-HCFPGFLGADCAKAACPVLCSGNGQYSKGTCQCYSGWK 462
Query: 112 KCDCNSHGNSVL-----GVCDSITGECICQDNTQGKNCER--CLPGYYGDPTDGGTCYYQ 164
+C+ N + G I G C+C +G++CE CL DPT +
Sbjct: 463 GAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYKGEHCEEVDCL-----DPTCSS--HGV 515
Query: 165 CMARGMLTGPGPQGLGSGLA 184
C+ L PG GL LA
Sbjct: 516 CVNGECLCSPGWGGLNCELA 535
Score = 82 (33.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C + CI C C TG C + +C C E HGTC
Sbjct: 572 CSVDCGTHGVCIGGACRCEEGWTGAACDQRVCHPRCIE---HGTC 613
Score = 75 (31.5 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDL 347
C +C E+ TC + +C C G C + CP+ C+ +G C L
Sbjct: 603 CHPRCIEHGTCKDGKCECREGWNGEHCTIDGCPDLCN---GNGRCTL 646
Score = 73 (30.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 284 KQGKPS--EGFNATY-QIFSCPDKCPENRTCI---NN-QCVCPPRRTGPDC 327
K GK EG+N + I CPD C N C N+ QCVC GP C
Sbjct: 614 KDGKCECREGWNGEHCTIDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGC 664
>UNIPROTKB|G3V106 [details] [associations]
symbol:TENM2 "Teneurin-2" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 GO:GO:0016021 GO:GO:0007165 EMBL:CH471062
Gene3D:2.120.10.30 InterPro:IPR011042 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR008969 SUPFAM:SSF49464
EMBL:AC026689 InterPro:IPR006530 TIGRFAMs:TIGR01643
InterPro:IPR022385 TIGRFAMs:TIGR03696 EMBL:AC008464 EMBL:AC008601
EMBL:AC008634 EMBL:AC008637 EMBL:AC008642 EMBL:AC008705
EMBL:AC008708 EMBL:AC011369 EMBL:AC011384 EMBL:AC091820
EMBL:AC093304 EMBL:AC113372 HGNC:HGNC:29943 ChiTaRS:ODZ2
Ensembl:ENST00000519204 ArrayExpress:G3V106 Bgee:G3V106
Uniprot:G3V106
Length = 2653
Score = 153 (58.9 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 44/142 (30%), Positives = 60/142 (42%)
Query: 30 NASLCYNKC-IYGYCKGPPDYSCQCELGWTGVDCSVN-C--LCNNHSTCVHGIGICDECH 85
+ +C C +G C G +C+CE GWTG C C C H TC G C EC
Sbjct: 614 SVEVCSVDCGTHGVCIGG---ACRCEEGWTGAACDQRVCHPRCIEHGTCKDGK--C-ECR 667
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ G+HC R + G T +GC CN +G LG + +C+CQ +G C
Sbjct: 668 EGWNGEHCTIGRQTA-GTET--DGCPDL-CNGNGRCTLG---QNSWQCVCQTGWRGPGCN 720
Query: 146 RCLPGYYGDPTDG-GTCYYQCM 166
+ D D G C+
Sbjct: 721 VAMETSCADNKDNEGDGLVDCL 742
Score = 138 (53.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIGICDECHDWTTGDHC 93
C G YS CQC GW G +C V C+ C H +C+ G +C + G+HC
Sbjct: 490 CSGNGQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYK---GEHC 546
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ + C C+SHG VC + GEC+C G NCE
Sbjct: 547 E------------EVDCLDPTCSSHG-----VC--VNGECLCSPGWGGLNCE 579
Score = 101 (40.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G N CPD+C + T + + C C P GPDC E+C +C HG C
Sbjct: 575 GLNCELARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCG---THGVC 628
Score = 90 (36.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 40/140 (28%), Positives = 53/140 (37%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ------YCRA-GSYGNATTQ--EGCR 111
DC NC + + CV G+ C C G C C G Y T Q G +
Sbjct: 454 DCPRNC--HGNGECVSGV--C-HCFPGFLGADCAKAACPVLCSGNGQYSKGTCQCYSGWK 508
Query: 112 KCDCNSHGNSVL-----GVCDSITGECICQDNTQGKNCER--CLPGYYGDPTDGGTCYYQ 164
+C+ N + G I G C+C +G++CE CL DPT +
Sbjct: 509 GAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYKGEHCEEVDCL-----DPTCSS--HGV 561
Query: 165 CMARGMLTGPGPQGLGSGLA 184
C+ L PG GL LA
Sbjct: 562 CVNGECLCSPGWGGLNCELA 581
Score = 82 (33.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C + CI C C TG C + +C C E HGTC
Sbjct: 618 CSVDCGTHGVCIGGACRCEEGWTGAACDQRVCHPRCIE---HGTC 659
Score = 61 (26.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 301 CPDKCPENRTCI---NN-QCVCPPRRTGPDC 327
CPD C N C N+ QCVC GP C
Sbjct: 689 CPDLCNGNGRCTLGQNSWQCVCQTGWRGPGC 719
Score = 55 (24.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDC---------QEEICPNECHEFLNHGTCDL 347
C +C E+ TC + +C C G C + + CP+ C+ +G C L
Sbjct: 649 CHPRCIEHGTCKDGKCECREGWNGEHCTIGRQTAGTETDGCPDLCN---GNGRCTL 701
>FB|FBgn0015774 [details] [associations]
symbol:NetB "Netrin-B" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007411 "axon
guidance" evidence=IGI;ISS;NAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISS] [GO:0070983 "dendrite guidance"
evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0008039 "synaptic target recognition"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 GO:GO:0007432 SMART:SM00643
GO:GO:0016200 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG244580 GeneTree:ENSGT00700000104042
GO:GO:2000289 EMBL:U60317 EMBL:U63737 RefSeq:NP_001162753.1
RefSeq:NP_001162754.1 RefSeq:NP_001162755.1 RefSeq:NP_001245668.1
RefSeq:NP_001245669.1 RefSeq:NP_511155.1 UniGene:Dm.3913
ProteinModelPortal:Q24568 SMR:Q24568 MINT:MINT-1334555
STRING:Q24568 PRIDE:Q24568 EnsemblMetazoa:FBtr0073940
EnsemblMetazoa:FBtr0302016 EnsemblMetazoa:FBtr0302017
EnsemblMetazoa:FBtr0302018 EnsemblMetazoa:FBtr0304874
EnsemblMetazoa:FBtr0304875 GeneID:32400 KEGG:dme:Dmel_CG10521
CTD:32400 FlyBase:FBgn0015774 InParanoid:Q24568 OMA:NECKMCQ
OrthoDB:EOG43R22P PhylomeDB:Q24568 GenomeRNAi:32400 NextBio:778273
Bgee:Q24568 GermOnline:CG10521 Uniprot:Q24568
Length = 793
Score = 180 (68.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 46/137 (33%), Positives = 62/137 (45%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDEC-HDWTTGDHCQYCRAGSYGNATT--- 106
CQC G C N S V G G+C C HD TTG +C YCR G Y +AT
Sbjct: 498 CQCN-GHAR-RCRFNLELYKLSGRVSG-GVCYNCQHD-TTGRYCHYCREGYYRDATKPPN 553
Query: 107 -QEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
++ C++CDC+ G S C+ ++G+C C++ G C RC GY + C
Sbjct: 554 HRKVCKRCDCHPVG-STGKTCNHLSGQCPCKEGVTGLTCNRCARGYQQTRSHVAPCIKVP 612
Query: 166 MARGMLTGPGPQGLGSG 182
M+ G G G
Sbjct: 613 TNANMIQAESAGGGGGG 629
>UNIPROTKB|F1MPK6 [details] [associations]
symbol:TNXB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048251 "elastic fiber assembly" evidence=IEA]
[GO:0043506 "regulation of JUN kinase activity" evidence=IEA]
[GO:0043206 "extracellular fibril organization" evidence=IEA]
[GO:0032963 "collagen metabolic process" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0016337 "cell-cell
adhesion" evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0006641
"triglyceride metabolic process" evidence=IEA] [GO:0006631 "fatty
acid metabolic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005583 "fibrillar collagen" evidence=IEA] [GO:0005518
"collagen binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181 INTERPRO:IPR020837
GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0030199 GO:GO:0008201 GO:GO:0006631
GO:GO:0005622 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0006641
GO:GO:0016337 PROSITE:PS01186 GO:GO:0007160 Gene3D:3.90.215.10
Gene3D:4.10.530.10 InterPro:IPR014716 InterPro:IPR014715
Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS00514
PROSITE:PS51406 GO:GO:0048251 InterPro:IPR013111 Pfam:PF07974
GO:GO:0043206 GO:GO:0043506 Pfam:PF12661 GO:GO:0005583
GeneTree:ENSGT00700000104247 GO:GO:0032963 EMBL:DAAA02055361
EMBL:DAAA02055362 EMBL:DAAA02055363 EMBL:DAAA02055364
EMBL:DAAA02055365 EMBL:DAAA02055366 EMBL:DAAA02055367
IPI:IPI00713324 Ensembl:ENSBTAT00000001893 OMA:PEGHFDH
Uniprot:F1MPK6
Length = 4059
Score = 130 (50.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 44/161 (27%), Positives = 63/161 (39%)
Query: 51 CQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTTGDHCQY--CRAGSYGNAT 105
C C G+TG CS +C C+ CV G+ +C +GD C C G
Sbjct: 124 CVCFPGYTGPSCSWPSCPGDCHGRGRCVQGVCVC---RSGFSGDDCSVRSCPRGCSQRGR 180
Query: 106 TQEGCRKCDCN-SHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQ 164
++G +C CN + GV S +C + + C C PGY GD +C
Sbjct: 181 CEDG--RCVCNPGYSGEDCGV-RSCPRDCSQRGRCENGRCV-CNPGYTGDDCGVRSCPRG 236
Query: 165 CMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQ 205
C +G G + + + G D SR C W G+
Sbjct: 237 CSQKGRCED------GRCVCDPG-YTGDDCGSRTCPWDCGE 270
Score = 126 (49.4 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 46/156 (29%), Positives = 64/156 (41%)
Query: 34 CYNKCIYGYCKGP---PDYSCQCELGWTGVDCSV-NCL--CNNHSTCVHGIGICDECHDW 87
C ++ G C+G D C C++G+ G DC +C C C+ G +CD+ ++
Sbjct: 445 CGSRRCPGDCRGRGRCEDGVCSCDVGYEGEDCGKRSCPRGCQGRGQCLEGRCVCDDGYE- 503
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKC--DCNSHGNSVLGVC---DSITGE-C---ICQDN 138
G+ C G R+C DCN G GVC + GE C +C N
Sbjct: 504 --GEDC---------------GVRRCPRDCNQRGVCQDGVCTCWEGFAGEDCGLRVCPSN 546
Query: 139 TQGKN-CE--RCL--PGYYGDPTDGGTCYYQCMARG 169
+ CE RC+ GY G TC C RG
Sbjct: 547 CHRRGRCENGRCVCDSGYTGPSCATRTCPADCRGRG 582
Score = 124 (48.7 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 43/145 (29%), Positives = 59/145 (40%)
Query: 34 CYNKCIY-GYCKGPPDYSCQCELGWTGVDCSV-NCL--CNNHSTCVHGIGICDECHDWTT 89
C C G C+ D C C G++G DC V +C C+ C +G +C+ + T
Sbjct: 171 CPRGCSQRGRCE---DGRCVCNPGYSGEDCGVRSCPRDCSQRGRCENGRCVCNPGY---T 224
Query: 90 GDHC--QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN---TQGKNC 144
GD C + C G ++G CD G+ C S T C + G+ C
Sbjct: 225 GDDCGVRSCPRGCSQKGRCEDGRCVCDPGYTGDD----CGSRTCPWDCGEGGRCVDGR-C 279
Query: 145 ERCLPGYYGDPTDGGTCYYQCMARG 169
C PGY G+ TC C RG
Sbjct: 280 V-CWPGYAGEDCSTRTCPRDCRGRG 303
Score = 115 (45.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 42/144 (29%), Positives = 54/144 (37%)
Query: 34 CYNKCIY-GYCKGPPDYSCQCELGWTGVDC-SVNCL--CNNHSTCVHGIGICDECHDWT- 88
C C G C+ D C C+ G+TG DC S C C CV G +C W
Sbjct: 233 CPRGCSQKGRCE---DGRCVCDPGYTGDDCGSRTCPWDCGEGGRCVDGRCVC-----WPG 284
Query: 89 -TGDHC--QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G+ C + C G ++G CD G+ GV S +C + + C
Sbjct: 285 YAGEDCSTRTCPRDCRGRGRCEDGECICDPGYSGDDC-GV-RSCPSDCNQRGRCEDGRCV 342
Query: 146 RCLPGYYGDPTDGGTCYYQCMARG 169
C PGY G C C RG
Sbjct: 343 -CWPGYSGPDCGARACPRDCRGRG 365
Score = 113 (44.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITH 356
SCP C + C + +CVC P +GPDC CP +C G C+ GV + H
Sbjct: 325 SCPSDCNQRGRCEDGRCVCWPGYSGPDCGARACPRDCR---GRGRCE---NGVCVCH 375
Score = 112 (44.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 44/136 (32%), Positives = 54/136 (39%)
Query: 51 CQCELGWTGVDCSV-NCL--CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
C C G+TG DC V +C C+ C G +CD + TGD C
Sbjct: 217 CVCNPGYTGDDCGVRSCPRGCSQKGRCEDGRCVCDPGY---TGDDC-------------- 259
Query: 108 EGCRKC--DCNSHGNSVLGVC---DSITGE-C---ICQDNTQGKN-CE--RCL--PGYYG 153
G R C DC G V G C GE C C + +G+ CE C+ PGY G
Sbjct: 260 -GSRTCPWDCGEGGRCVDGRCVCWPGYAGEDCSTRTCPRDCRGRGRCEDGECICDPGYSG 318
Query: 154 DPTDGGTCYYQCMARG 169
D +C C RG
Sbjct: 319 DDCGVRSCPSDCNQRG 334
Score = 110 (43.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 41/136 (30%), Positives = 56/136 (41%)
Query: 50 SCQCELGWTGVDCS-VNCLCNNHSTCVHGIGIC-DECHDW--TTGDHCQYCRAGSYGNAT 105
+C CE GW G CS S+ G C D+C+D C C G G +
Sbjct: 77 ACSCEPGWGGPTCSDPEGAEGPPSSPPSAPGSCPDDCNDQGRCVRGRC-VCFPGYTGPSC 135
Query: 106 TQEGCRKCDCNSHGNSVLGVCDSITG----ECICQDNTQGKN----CE--RCL--PGYYG 153
+ C DC+ G V GVC +G +C + +G + CE RC+ PGY G
Sbjct: 136 SWPSCPG-DCHGRGRCVQGVCVCRSGFSGDDCSVRSCPRGCSQRGRCEDGRCVCNPGYSG 194
Query: 154 DPTDGGTCYYQCMARG 169
+ +C C RG
Sbjct: 195 EDCGVRSCPRDCSQRG 210
Score = 105 (42.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
SCP C + C N +CVC P TG DC CP C + G C+
Sbjct: 201 SCPRDCSQRGRCENGRCVCNPGYTGDDCGVRSCPRGCSQ---KGRCE 244
Score = 105 (42.0 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 42/173 (24%), Positives = 62/173 (35%)
Query: 34 CYNKCIY-GYCKGPPDYSCQCELGWTGVDCSVNCL---CNNHSTCVHGIGICDECHDWTT 89
C + C G C+ D C C G++G DC C C +G+ +C H +
Sbjct: 326 CPSDCNQRGRCE---DGRCVCWPGYSGPDCGARACPRDCRGRGRCENGVCVC---HAGYS 379
Query: 90 GDHC--QYCRAGSYGNATTQEGCRKCDC-NSHGNSVLGVCDSITGECICQDNTQGKNCER 146
G+ C + C G + G +C C + G + G+C + C
Sbjct: 380 GEDCGVRSCPGDCRGRGRCESG--RCVCWPGYTGRDCGT-RACPGDCRGRGRCVDGRCV- 435
Query: 147 CLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSREC 199
C PG+ G+ C C RG G G +EG+D R C
Sbjct: 436 CNPGFAGEDCGSRRCPGDCRGRGRCED-GVCSCDVG------YEGEDCGKRSC 481
Score = 104 (41.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+CP C E C++ +CVC P G DC CP +C G C+
Sbjct: 263 TCPWDCGEGGRCVDGRCVCWPGYAGEDCSTRTCPRDCR---GRGRCE 306
Score = 103 (41.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 20/56 (35%), Positives = 24/56 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITH 356
CP C C N +CVC TGP C CP +C G C + GV + H
Sbjct: 543 CPSNCHRRGRCENGRCVCDSGYTGPSCATRTCPADCR---GRGRC---VQGVCVCH 592
Score = 103 (41.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHE 338
SCP C + C + +CVC P TG DC CP +C E
Sbjct: 232 SCPRGCSQKGRCEDGRCVCDPGYTGDDCGSRTCPWDCGE 270
Score = 103 (41.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/113 (26%), Positives = 42/113 (37%)
Query: 51 CQCELGWTGVDCSVNCL---CNNHSTCVHGIGICDECHDWTTGDHC--QYCRAGSYGNAT 105
C C G+TG DC C CV G +C+ G+ C + C G
Sbjct: 403 CVCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCNPGF---AGEDCGSRRCPGDCRGRGR 459
Query: 106 TQEGCRKCDCNSHGN-----SVLGVCDS----ITGECICQDNTQGKNC--ERC 147
++G CD G S C + G C+C D +G++C RC
Sbjct: 460 CEDGVCSCDVGYEGEDCGKRSCPRGCQGRGQCLEGRCVCDDGYEGEDCGVRRC 512
Score = 98 (39.6 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+CP C C++ +CVC P G DC CP +C G C+
Sbjct: 418 ACPGDCRGRGRCVDGRCVCNPGFAGEDCGSRRCPGDCR---GRGRCE 461
Score = 97 (39.2 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 18/46 (39%), Positives = 21/46 (45%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SCP C C + +CVC P TG DC CP +C G C
Sbjct: 387 SCPGDCRGRGRCESGRCVCWPGYTGRDCGTRACPGDCR---GRGRC 429
Score = 97 (39.2 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+CP C C + +C+C P +G DC CP++C++ G C+
Sbjct: 294 TCPRDCRGRGRCEDGECICDPGYSGDDCGVRSCPSDCNQ---RGRCE 337
Score = 95 (38.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 17/46 (36%), Positives = 20/46 (43%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+CP C C QCVC GPDC + CP +C G C
Sbjct: 609 ACPGGCGPRELCSAGQCVCVEGFRGPDCAIQTCPGDCR---GRGEC 651
Score = 91 (37.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SCP C C+ +CVC G DC CP +C++ G C
Sbjct: 480 SCPRGCQGRGQCLEGRCVCDDGYEGEDCGVRRCPRDCNQ---RGVC 522
Score = 88 (36.0 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP C + C + C C G DC +CP+ CH G C+
Sbjct: 512 CPRDCNQRGVCQDGVCTCWEGFAGEDCGLRVCPSNCHR---RGRCE 554
Score = 86 (35.3 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+CP C C N CVC +G DC CP +C G C+
Sbjct: 356 ACPRDCRGRGRCENGVCVCHAGYSGEDCGVRSCPGDCR---GRGRCE 399
Score = 80 (33.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 19/53 (35%), Positives = 23/53 (43%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDC-QEE----ICPNEC--HEFLNHGTC 345
+CP C C+ CVC +G DC QEE CP C E + G C
Sbjct: 573 TCPADCRGRGRCVQGVCVCHVGYSGEDCGQEEPPASACPGGCGPRELCSAGQC 625
Score = 75 (31.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 290 EGFNAT-YQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEI 331
EGF I +CP C C CVC G DC EE+
Sbjct: 629 EGFRGPDCAIQTCPGDCRGRGECREGSCVCQDGYAGEDCGEEV 671
Score = 70 (29.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 14/45 (31%), Positives = 16/45 (35%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C C + C C G DC + CP C G C
Sbjct: 450 CPGDCRGRGRCEDGVCSCDVGYEGEDCGKRSCPRGCQ---GRGQC 491
>UNIPROTKB|O75445 [details] [associations]
symbol:USH2A "Usherin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0050953 "sensory perception of light stimulus"
evidence=IMP] [GO:0005518 "collagen binding" evidence=IDA]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0048496
"maintenance of organ identity" evidence=IMP] [GO:0045494
"photoreceptor cell maintenance" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=ISS]
[GO:0060113 "inner ear receptor cell differentiation" evidence=ISS]
[GO:0017022 "myosin binding" evidence=ISS] [GO:0002142 "stereocilia
ankle link complex" evidence=ISS] [GO:0016324 "apical plasma
membrane" evidence=ISS] [GO:0032421 "stereocilium bundle"
evidence=ISS] [GO:0060171 "stereocilium membrane" evidence=ISS]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 Orphanet:791 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 GO:GO:0017022 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113
Pfam:PF02210 GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 EMBL:AL445650 Orphanet:231178
GO:GO:0002142 GO:GO:0048496 EMBL:AC092799 GO:GO:0060171
InterPro:IPR006558 SMART:SM00560 EMBL:AF055580 EMBL:AF091889
EMBL:AF091873 EMBL:AF091875 EMBL:AF091876 EMBL:AF091874
EMBL:AF091877 EMBL:AF091879 EMBL:AF091881 EMBL:AF091883
EMBL:AF091888 EMBL:AF091887 EMBL:AF091886 EMBL:AF091885
EMBL:AF091884 EMBL:AF091882 EMBL:AF091880 EMBL:AF091878
EMBL:AY481573 EMBL:AC138024 EMBL:AL358858 EMBL:AC093581
EMBL:AC119429 EMBL:AL139259 EMBL:AL358452 EMBL:AL513305
IPI:IPI00289540 IPI:IPI00410150 IPI:IPI00741527 RefSeq:NP_009054.5
RefSeq:NP_996816.2 UniGene:Hs.655974 ProteinModelPortal:O75445
STRING:O75445 PhosphoSite:O75445 PaxDb:O75445 PRIDE:O75445
Ensembl:ENST00000307340 Ensembl:ENST00000366942
Ensembl:ENST00000366943 GeneID:7399 KEGG:hsa:7399 UCSC:uc001hku.1
UCSC:uc001hkv.3 CTD:7399 GeneCards:GC01M215796 H-InvDB:HIX0028527
HGNC:HGNC:12601 MIM:276901 MIM:608400 MIM:613809 neXtProt:NX_O75445
PharmGKB:PA37228 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 GenomeRNAi:7399
NextBio:28962 Bgee:O75445 CleanEx:HS_USH2A Genevestigator:O75445
GermOnline:ENSG00000042781 InterPro:IPR026915
PANTHER:PTHR10574:SF53 Uniprot:O75445
Length = 5202
Score = 186 (70.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 47/141 (33%), Positives = 66/141 (46%)
Query: 38 CIYGY--CKGPPDYSCQ-CELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
C +G+ + D C+ C+ G SVN CN HS G C EC G C
Sbjct: 729 CNFGFKFLRSFNDVGCEPCQCNLHG---SVNKFCNPHS------GQC-ECKKEAKGLQCD 778
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG-YYG 153
CR YG T C+ CDC++ G+ VC++ TG+CIC+ N +G+ C +CL G +Y
Sbjct: 779 TCRENFYGLDVTN--CKACDCDTAGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGNFYL 836
Query: 154 DPTDGGTCY-YQCMARGMLTG 173
+ C C G + G
Sbjct: 837 RQNNSFLCLPCNCDKTGTING 857
Score = 181 (68.8 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 45/131 (34%), Positives = 62/131 (47%)
Query: 36 NKCIYG--YCKGPPDYSC-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDH 92
NKC+ G Y + + C C TG + + LCN ST G C C TG
Sbjct: 827 NKCLEGNFYLRQNNSFLCLPCNCDKTGT-INGSLLCNK-ST-----GQCP-CKLGVTGLR 878
Query: 93 CQYCRAGSYGNATTQ--EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
C C Y N T + C+ C+C+S G +CD I+G+C+C N QG+ C +C PG
Sbjct: 879 CNQCEPHRY-NLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGRRCNQCQPG 937
Query: 151 YYGDPTDGGTC 161
+Y P + C
Sbjct: 938 FYISPGNATGC 948
Score = 166 (63.5 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 57/164 (34%), Positives = 76/164 (46%)
Query: 30 NASLCYNKCIYGYCK---GPPDYSC-QCE---LGWTGVD----CSVNCLCNNHSTCVHGI 78
N SL NK G C G C QCE T +D C + C C++ T + G
Sbjct: 856 NGSLLCNKST-GQCPCKLGVTGLRCNQCEPHRYNLT-IDNFQHCQM-CECDSLGT-LPGT 911
Query: 79 GICDE------CHDWTTGDHCQYCRAGSY---GNATTQEGCRKCDCNSHGNSVLGVCDSI 129
ICD C G C C+ G Y GNAT GC C C++ G +V +C+S+
Sbjct: 912 -ICDPISGQCLCVPNRQGRRCNQCQPGFYISPGNAT---GCLPCSCHTTG-AVNHICNSL 966
Query: 130 TGECICQD-NTQGKNCERCLPGYYG-DPTDGGTCYYQCMARGML 171
TG+C+CQD + G+ C++C Y+G DP G C G L
Sbjct: 967 TGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGAL 1010
Score = 158 (60.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 77 GIGICDECHDWTTGDHCQYCRAGSY----GNATTQEGCRKCDCNSHGN---SVLGVCDSI 129
G G+CD+C TTG +C+ C+ + + + + C+ CDC++ G S+L CD I
Sbjct: 601 GGGVCDDCEHNTTGRNCELCKDYFFRQVGADPSAIDVCKPCDCDTVGTRNGSIL--CDQI 658
Query: 130 TGECICQDNTQGKNCERCLPGYYG----DPTDGGTCYYQCMARGMLTG 173
G+C C+ + G+ C +C G+Y DP C C G + G
Sbjct: 659 GGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPC--NCNTSGTVDG 704
Score = 55 (24.4 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 31/111 (27%), Positives = 43/111 (38%)
Query: 275 KSGVMTIHYKQGKPSEGFNATYQIFS-CPD-KCPENRT-----C--INNQCVCPPRRTGP 325
K GV + Q +P +N T F C +C T C I+ QC+C P R G
Sbjct: 871 KLGVTGLRCNQCEPHR-YNLTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGR 929
Query: 326 DCQEEICPNECHE--FLNHGTCD-LLLTGVHITHGRTLHYQVDLI-RCTCR 372
C N+C +++ G L H T G H L +C C+
Sbjct: 930 RC------NQCQPGFYISPGNATGCLPCSCHTT-GAVNHICNSLTGQCVCQ 973
Score = 50 (22.7 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 308 NRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNH 342
N TC + QC C TG C + P+ H +N+
Sbjct: 1011 NETCHLVTGQCFCKQFVTGSKC-DACVPSASHLDVNN 1046
Score = 42 (19.8 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 157 DGGTCYYQCMARGMLTGPGPQGL 179
+GG+ Y +RG TG PQ +
Sbjct: 1936 EGGSVYSD-WSRGRTTGAAPQSV 1957
Score = 42 (19.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 315 QCVCPPRRTGPDCQE 329
QC+C P G C +
Sbjct: 814 QCICKPNVEGRQCNK 828
Score = 40 (19.1 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 18/88 (20%), Positives = 33/88 (37%)
Query: 277 GVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNEC 336
G+ + Q KP + Q + + T I + P + P + ++ P
Sbjct: 4590 GMQSYIVNQLKPFHRYEIRIQACTTLGCASSDWTFIQTPEIAPLMQPPPHLEVQMAPGGF 4649
Query: 337 HEFLNHGTCDLLLTGVHITHGRTLHYQV 364
T LL TG +G+ L+Y++
Sbjct: 4650 QP-----TVSLLWTGPLQPNGKVLYYEL 4672
Score = 39 (18.8 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 319 PPRRTGPDCQEEICPNECH 337
PP+R P ++I E H
Sbjct: 1242 PPQRLSPPKMQKISSTELH 1260
>UNIPROTKB|Q13753 [details] [associations]
symbol:LAMC2 "Laminin subunit gamma-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779 GO:GO:0005938
GO:GO:0048471 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 GO:GO:0005615 GO:GO:0008201
GO:GO:0007155 EMBL:CH471067 PROSITE:PS00022 Reactome:REACT_111155
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0031581 Orphanet:79402
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 MIM:226700 Orphanet:79404 GO:GO:0005610
GO:GO:0005607 EMBL:AL354953 EMBL:Z15008 EMBL:Z15009 EMBL:X73902
EMBL:U31201 EMBL:U31178 EMBL:U31179 EMBL:U31180 EMBL:U31181
EMBL:U31182 EMBL:U31183 EMBL:U31184 EMBL:U31186 EMBL:U31187
EMBL:U31188 EMBL:U31189 EMBL:U31190 EMBL:U31191 EMBL:U31192
EMBL:U31193 EMBL:U31194 EMBL:U31195 EMBL:U31196 EMBL:U31197
EMBL:U31198 EMBL:U31199 EMBL:U31200 EMBL:BC113378 IPI:IPI00015117
IPI:IPI00220572 PIR:A44018 RefSeq:NP_005553.2 RefSeq:NP_061486.2
UniGene:Hs.591484 ProteinModelPortal:Q13753 SMR:Q13753 DIP:DIP-190N
MINT:MINT-4053464 STRING:Q13753 Allergome:8331 PhosphoSite:Q13753
DMDM:90185107 PaxDb:Q13753 PeptideAtlas:Q13753 PRIDE:Q13753
Ensembl:ENST00000264144 Ensembl:ENST00000493293 GeneID:3918
KEGG:hsa:3918 UCSC:uc001gpz.4 UCSC:uc001gqa.2 CTD:3918
GeneCards:GC01P183155 HGNC:HGNC:6493 HPA:CAB004257 HPA:HPA024638
MIM:150292 neXtProt:NX_Q13753 PharmGKB:PA30281 eggNOG:NOG285700
HOVERGEN:HBG062127 InParanoid:Q13753 KO:K06246 OMA:DRCLPCN
OrthoDB:EOG4ZCT3N PhylomeDB:Q13753 ChiTaRS:LAMC2 GenomeRNAi:3918
NextBio:15391 PMAP-CutDB:Q13753 ArrayExpress:Q13753 Bgee:Q13753
CleanEx:HS_LAMC2 Genevestigator:Q13753 GermOnline:ENSG00000058085
Uniprot:Q13753
Length = 1193
Score = 179 (68.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 41/126 (32%), Positives = 61/126 (48%)
Query: 47 PDYSC-QCELGWTGV-----DCSVNCLCNNHSTC-----VHGIGICDECHDWTTGDHCQY 95
PD C C +G+ C C C+N +C + +C+ C TG C+
Sbjct: 438 PDIECADCPIGFYNDPHDPRSCKP-CPCHNGFSCSVMPETEEV-VCNNCPPGVTGARCEL 495
Query: 96 CRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGKNCERCLP 149
C G +G+ + G C+ C CN++ + S G CD +TG C+ C NT G C++C
Sbjct: 496 CADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIHNTAGIYCDQCKA 555
Query: 150 GYYGDP 155
GY+GDP
Sbjct: 556 GYFGDP 561
Score = 167 (63.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 40/104 (38%), Positives = 55/104 (52%)
Query: 66 CLCNNHST-CV-----H---GIGI-CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDC 115
C CN S C+ H G G C C+D T G HC+ C+ G Y + ++ C C+C
Sbjct: 28 CDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRE-RDRCLPCNC 86
Query: 116 NSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
NS G S+ CD+ +G C C+ G C+RCLPG++ TD G
Sbjct: 87 NSKG-SLSARCDN-SGRCSCKPGVTGARCDRCLPGFHM-LTDAG 127
Score = 140 (54.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 36/108 (33%), Positives = 49/108 (45%)
Query: 66 CLCNNH------STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCN 116
C CNN+ C G C +C T G +C C+AG +G+ + CR C+CN
Sbjct: 517 CQCNNNVDPSASGNCDRLTGRCLKCIHNTAGIYCDQCKAGYFGDPLAPNPADKCRACNCN 576
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQ 164
G+ +G C S G C+C+ G NCE G + P CY Q
Sbjct: 577 PMGSEPVG-CRS-DGTCVCKPGFGGPNCEH---GAFSCPA----CYNQ 615
Score = 139 (54.0 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 41/124 (33%), Positives = 53/124 (42%)
Query: 61 DCSVNCLCNNHST----CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCR----- 111
D + C CN+ + C + G C C TG C C G + T GC
Sbjct: 79 DRCLPCNCNSKGSLSARCDNS-GRCS-CKPGVTGARCDRCLPGFH--MLTDAGCTQDQRL 134
Query: 112 ---KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGT---CYYQC 165
KCDC+ G + G CD+ G C+C+ G+ C+RC GYY DGG C QC
Sbjct: 135 LDSKCDCDPAG--IAGPCDA--GRCVCKPAVTGERCDRCRSGYYN--LDGGNPEGCT-QC 187
Query: 166 MARG 169
G
Sbjct: 188 FCYG 191
Score = 52 (23.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 299 FSCPDKCPENRTCINNQCVCPPRRTGPDCQEEIC 332
FSC PE + N C PP TG C E+C
Sbjct: 468 FSC-SVMPETEEVVCNNC--PPGVTGARC--ELC 496
Score = 49 (22.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 316 CVCPPRRTGPDCQEEI--CPNECH 337
CVC P GP+C+ CP C+
Sbjct: 591 CVCKPGFGGPNCEHGAFSCP-ACY 613
Score = 48 (22.0 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 11/53 (20%), Positives = 21/53 (39%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHG 357
C +++ ++++C C P C C C + CD +G + G
Sbjct: 128 CTQDQRLLDSKCDCDPAGIAGPCDAGRCV--CKPAVTGERCDRCRSGYYNLDG 178
Score = 44 (20.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 315 QCVCPPRRTGPDCQE 329
QC+CP G CQ+
Sbjct: 381 QCICPVGYKGQFCQD 395
Score = 41 (19.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 325 PDCQEEICPNECHEFLNHGTCDLLLTG 351
P+ +E +C N C + C+L G
Sbjct: 474 PETEEVVC-NNCPPGVTGARCELCADG 499
>UNIPROTKB|F5H2D1 [details] [associations]
symbol:TENM2 "Teneurin-2" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 GO:GO:0016021 GO:GO:0007165 Gene3D:2.120.10.30
InterPro:IPR011042 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR008969 SUPFAM:SSF49464 EMBL:AC026689
InterPro:IPR006530 TIGRFAMs:TIGR01643 InterPro:IPR022385
TIGRFAMs:TIGR03696 EMBL:AC008464 EMBL:AC008601 EMBL:AC008634
EMBL:AC008637 EMBL:AC008642 EMBL:AC008705 EMBL:AC008708
EMBL:AC011369 EMBL:AC011384 EMBL:AC091820 EMBL:AC093304
EMBL:AC113372 IPI:IPI00182194 HGNC:HGNC:29943 ChiTaRS:ODZ2
Ensembl:ENST00000545108 ArrayExpress:F5H2D1 Bgee:F5H2D1
Uniprot:F5H2D1
Length = 2773
Score = 148 (57.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 43/142 (30%), Positives = 57/142 (40%)
Query: 30 NASLCYNKC-IYGYCKGPPDYSCQCELGWTGVDCSVN-C--LCNNHSTCVHGIGICDECH 85
+ +C C +G C G +C+CE GWTG C C C H TC G C EC
Sbjct: 735 SVEVCSVDCGTHGVCIGG---ACRCEEGWTGAACDQRVCHPRCIEHGTCKDGK--C-ECR 788
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ G+HC R G GC CN +G LG + +C+CQ +G C
Sbjct: 789 EGWNGEHCTIVRETIGGECY---GCPDL-CNGNGRCTLG---QNSWQCVCQTGWRGPGCN 841
Query: 146 RCLPGYYGDPTDG-GTCYYQCM 166
+ D D G C+
Sbjct: 842 VAMETSCADNKDNEGDGLVDCL 863
Score = 141 (54.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/151 (31%), Positives = 64/151 (42%)
Query: 34 CYNKCIYGYCKGPPDYS-CQCELGWTGVDCSVN-CL--CNNHSTCVHGIGICDECHDWTT 89
C ++C G+ PD C C+ W G DCSV C C H C+ G C+E WT
Sbjct: 706 CPDQCS-GHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCGTHGVCIGGACRCEE--GWT- 761
Query: 90 GDHC--QYCRAGSYGNATTQEGCRKCDCNS--HGNSVLGVCDSITGECI-CQDNTQGKNC 144
G C + C + T ++G KC+C +G V ++I GEC C D G
Sbjct: 762 GAACDQRVCHPRCIEHGTCKDG--KCECREGWNGEHCTIVRETIGGECYGCPDLCNGNG- 818
Query: 145 ERCLPGYYGDPTDGGTCYYQCMARGMLTGPG 175
RC G +QC+ + GPG
Sbjct: 819 -RCTLGQNS---------WQCVCQTGWRGPG 839
Score = 138 (53.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIGICDECHDWTTGDHC 93
C G YS CQC GW G +C V C+ C H +C+ G +C + G+HC
Sbjct: 611 CSGNGQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYK---GEHC 667
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ + C C+SHG VC + GEC+C G NCE
Sbjct: 668 E------------EVDCLDPTCSSHG-----VC--VNGECLCSPGWGGLNCE 700
Score = 101 (40.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G N CPD+C + T + + C C P GPDC E+C +C HG C
Sbjct: 696 GLNCELARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCG---THGVC 749
Score = 90 (36.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 40/140 (28%), Positives = 53/140 (37%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ------YCRA-GSYGNATTQ--EGCR 111
DC NC + + CV G+ C C G C C G Y T Q G +
Sbjct: 575 DCPRNC--HGNGECVSGV--C-HCFPGFLGADCAKAACPVLCSGNGQYSKGTCQCYSGWK 629
Query: 112 KCDCNSHGNSVL-----GVCDSITGECICQDNTQGKNCER--CLPGYYGDPTDGGTCYYQ 164
+C+ N + G I G C+C +G++CE CL DPT +
Sbjct: 630 GAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYKGEHCEEVDCL-----DPTCSS--HGV 682
Query: 165 CMARGMLTGPGPQGLGSGLA 184
C+ L PG GL LA
Sbjct: 683 CVNGECLCSPGWGGLNCELA 702
Score = 82 (33.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C + CI C C TG C + +C C E HGTC
Sbjct: 739 CSVDCGTHGVCIGGACRCEEGWTGAACDQRVCHPRCIE---HGTC 780
Score = 65 (27.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 297 QIFSCPDKCPENRTCI---NN-QCVCPPRRTGPDC 327
+ + CPD C N C N+ QCVC GP C
Sbjct: 806 ECYGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGC 840
Score = 60 (26.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQ--EEICPNECH---EFLN-HGTCDL 347
C +C E+ TC + +C C G C E EC+ + N +G C L
Sbjct: 770 CHPRCIEHGTCKDGKCECREGWNGEHCTIVRETIGGECYGCPDLCNGNGRCTL 822
>UNIPROTKB|Q9NT68 [details] [associations]
symbol:TENM2 "Teneurin-2" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS;IDA] [GO:0016605 "PML body" evidence=ISS] [GO:0005102
"receptor binding" evidence=IDA] [GO:0050839 "cell adhesion
molecule binding" evidence=IDA] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=IDA] [GO:0007411 "axon guidance" evidence=IDA]
[GO:0035584 "calcium-mediated signaling using intracellular calcium
source" evidence=IDA] [GO:0005911 "cell-cell junction"
evidence=IDA] [GO:0043005 "neuron projection" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0045202 "synapse"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0016337 "cell-cell adhesion" evidence=ISS] [GO:0030054 "cell
junction" evidence=ISS] [GO:0030175 "filopodium" evidence=ISS]
[GO:0030425 "dendrite" evidence=ISS] [GO:0030426 "growth cone"
evidence=ISS] [GO:0051491 "positive regulation of filopodium
assembly" evidence=ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
InterPro:IPR000742 InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026
PROSITE:PS51361 SMART:SM00181 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 GO:GO:0005794 GO:GO:0007411 GO:GO:0007165
GO:GO:0042803 GO:GO:0016605 GO:GO:0030054 GO:GO:0045211
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0005102 GO:GO:0043197
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122
GO:GO:0030175 GO:GO:0030426 GO:GO:0016337 PROSITE:PS01186
GO:GO:0046982 InterPro:IPR008969 SUPFAM:SSF49464 GO:GO:0050839
GO:GO:0007157 GO:GO:0051491 PROSITE:PS51125 GO:GO:0035584
EMBL:AC026689 eggNOG:NOG323120 HOGENOM:HOG000231701
HOVERGEN:HBG080306 InterPro:IPR006530 TIGRFAMs:TIGR01643
OrthoDB:EOG4QC14D InterPro:IPR022385 TIGRFAMs:TIGR03696
EMBL:AC008464 EMBL:AC008601 EMBL:AC008634 EMBL:AC008637
EMBL:AC008642 EMBL:AC008705 EMBL:AC008708 EMBL:AC011369
EMBL:AC011384 EMBL:AC091820 EMBL:AC093304 EMBL:AC113372
EMBL:AB032953 EMBL:AL137500 IPI:IPI00182194 PIR:T46253
UniGene:Hs.631957 ProteinModelPortal:Q9NT68 SMR:Q9NT68
IntAct:Q9NT68 STRING:Q9NT68 PhosphoSite:Q9NT68 DMDM:290457667
PaxDb:Q9NT68 PRIDE:Q9NT68 Ensembl:ENST00000518659 UCSC:uc003lzt.4
GeneCards:GC05P166646 HGNC:HGNC:29943 HPA:HPA038420 MIM:610119
neXtProt:NX_Q9NT68 InParanoid:Q9NT68 OMA:GHLFQKS ChiTaRS:ODZ2
ArrayExpress:Q9NT68 Bgee:Q9NT68 CleanEx:HS_ODZ2
Genevestigator:Q9NT68 GermOnline:ENSG00000145934 Uniprot:Q9NT68
Length = 2774
Score = 153 (58.9 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 44/142 (30%), Positives = 60/142 (42%)
Query: 30 NASLCYNKC-IYGYCKGPPDYSCQCELGWTGVDCSVN-C--LCNNHSTCVHGIGICDECH 85
+ +C C +G C G +C+CE GWTG C C C H TC G C EC
Sbjct: 735 SVEVCSVDCGTHGVCIGG---ACRCEEGWTGAACDQRVCHPRCIEHGTCKDGK--C-ECR 788
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ G+HC R + G T +GC CN +G LG + +C+CQ +G C
Sbjct: 789 EGWNGEHCTIGRQTA-GTET--DGCPDL-CNGNGRCTLG---QNSWQCVCQTGWRGPGCN 841
Query: 146 RCLPGYYGDPTDG-GTCYYQCM 166
+ D D G C+
Sbjct: 842 VAMETSCADNKDNEGDGLVDCL 863
Score = 138 (53.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIGICDECHDWTTGDHC 93
C G YS CQC GW G +C V C+ C H +C+ G +C + G+HC
Sbjct: 611 CSGNGQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYK---GEHC 667
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ + C C+SHG VC + GEC+C G NCE
Sbjct: 668 E------------EVDCLDPTCSSHG-----VC--VNGECLCSPGWGGLNCE 700
Score = 101 (40.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G N CPD+C + T + + C C P GPDC E+C +C HG C
Sbjct: 696 GLNCELARVQCPDQCSGHGTYLPDTGLCSCDPNWMGPDCSVEVCSVDCG---THGVC 749
Score = 90 (36.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 40/140 (28%), Positives = 53/140 (37%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ------YCRA-GSYGNATTQ--EGCR 111
DC NC + + CV G+ C C G C C G Y T Q G +
Sbjct: 575 DCPRNC--HGNGECVSGV--C-HCFPGFLGADCAKAACPVLCSGNGQYSKGTCQCYSGWK 629
Query: 112 KCDCNSHGNSVL-----GVCDSITGECICQDNTQGKNCER--CLPGYYGDPTDGGTCYYQ 164
+C+ N + G I G C+C +G++CE CL DPT +
Sbjct: 630 GAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYKGEHCEEVDCL-----DPTCSS--HGV 682
Query: 165 CMARGMLTGPGPQGLGSGLA 184
C+ L PG GL LA
Sbjct: 683 CVNGECLCSPGWGGLNCELA 702
Score = 82 (33.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C + CI C C TG C + +C C E HGTC
Sbjct: 739 CSVDCGTHGVCIGGACRCEEGWTGAACDQRVCHPRCIE---HGTC 780
Score = 61 (26.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 301 CPDKCPENRTCI---NN-QCVCPPRRTGPDC 327
CPD C N C N+ QCVC GP C
Sbjct: 810 CPDLCNGNGRCTLGQNSWQCVCQTGWRGPGC 840
Score = 55 (24.4 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDC---------QEEICPNECHEFLNHGTCDL 347
C +C E+ TC + +C C G C + + CP+ C+ +G C L
Sbjct: 770 CHPRCIEHGTCKDGKCECREGWNGEHCTIGRQTAGTETDGCPDLCN---GNGRCTL 822
>UNIPROTKB|F1RK83 [details] [associations]
symbol:SCARF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007157 "heterophilic cell-cell adhesion" evidence=IEA]
[GO:0005044 "scavenger receptor activity" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007157 InterPro:IPR009030 SUPFAM:SSF57184
GO:GO:0005044 GeneTree:ENSGT00690000101691 OMA:NVCRAPG
EMBL:CU468322 Ensembl:ENSSSCT00000011070 Uniprot:F1RK83
Length = 870
Score = 173 (66.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 53/158 (33%), Positives = 66/158 (41%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ-Y 95
+C +G C P +C+CE GW G C+ C C+ S C G C CH G C
Sbjct: 157 QCQHGACH-PRSGACRCEPGWWGAQCASACYCSATSRCDPQTGAC-LCHSGWWGRSCNNQ 214
Query: 96 CRAGSYGNATTQEG---CRK----CDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERC 147
C S Q G CR+ C + G C + G C C+ +GK C E C
Sbjct: 215 CACNS-SPCEQQSGRCQCRERTFGARCERYCQCFRGRCHPVDGTCSCEPGYRGKYCREPC 273
Query: 148 LPGYYGD--PTDGGTCYYQ--C-MARGM-LT-GPGPQG 178
G+YG P G C Q C +A G LT PG G
Sbjct: 274 PAGFYGPGLPPPCGQCKGQQPCTVAEGRCLTCEPGWNG 311
Score = 146 (56.5 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 38/116 (32%), Positives = 50/116 (43%)
Query: 53 CELGWTGVDCSVNCL-CNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGC 110
C G+ G C C C + +C H G C C+ GD C+ C G+YG E C
Sbjct: 318 CSTGFYGEGCGHRCPPCRDGHSCNHVTGKCTRCNAGWIGDRCETKCSNGTYG-----EDC 372
Query: 111 R-KC-DCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG-DPTDGGTCY 162
C DC S G CD +G C+C G +C C PG +G D +C+
Sbjct: 373 AFVCADCGS------GHCDFQSGRCLCSPGVHGPHCNLTCPPGLHGVDCAQACSCH 422
Score = 137 (53.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 49/167 (29%), Positives = 62/167 (37%)
Query: 35 YNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC--------------LCNNHSTCVHGIGI 80
Y +C G C P D +C CE G+ G C C C C G
Sbjct: 243 YCQCFRGRCH-PVDGTCSCEPGYRGKYCREPCPAGFYGPGLPPPCGQCKGQQPCTVAEGR 301
Query: 81 CDECHDWTTGDHC-QYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECI-CQD 137
C C G C Q C G YG EGC +C G+S C+ +TG+C C
Sbjct: 302 CLTCEPGWNGTKCDQPCSTGFYG-----EGCGHRCPPCRDGHS----CNHVTGKCTRCNA 352
Query: 138 NTQGKNCE-RCLPGYYGDP-----TDGGTCYYQCMARGMLTGPGPQG 178
G CE +C G YG+ D G+ + + L PG G
Sbjct: 353 GWIGDRCETKCSNGTYGEDCAFVCADCGSGHCDFQSGRCLCSPGVHG 399
Score = 135 (52.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 39/141 (27%), Positives = 54/141 (38%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
+C +GY D C + W G DC C+C+ H C G C CH G C++
Sbjct: 99 RCRHGYFGANCDTKCPRQF-W-GPDCKELCVCHPHGQCEDVTGQCT-CHARRWGARCEHA 155
Query: 97 RAGSYGNATTQEGCRKCD-------CNSHGN-SVLGVCDSITGECICQDNTQGKNCE-RC 147
+G + G +C+ C S S CD TG C+C G++C +C
Sbjct: 156 CQCQHGACHPRSGACRCEPGWWGAQCASACYCSATSRCDPQTGACLCHSGWWGRSCNNQC 215
Query: 148 LPGYYGDPTDGGTCYYQCMAR 168
G C QC R
Sbjct: 216 ACNSSPCEQQSGRC--QCRER 234
Score = 119 (46.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 34/122 (27%), Positives = 52/122 (42%)
Query: 43 CKGPPDYSCQCELGWT--GVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
C+ P C +GW G +C + +C +STC +C G+ C+ CR G
Sbjct: 54 CRAPGSQELTCCIGWRQQGDECGI-AVCEGNSTCSEN-EVCVR-----PGE-CR-CRHGY 104
Query: 101 YG-NATTQ-------EGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
+G N T+ C++ C C+ HG C+ +TG+C C G CE
Sbjct: 105 FGANCDTKCPRQFWGPDCKELCVCHPHGQ-----CEDVTGQCTCHARRWGARCEHACQCQ 159
Query: 152 YG 153
+G
Sbjct: 160 HG 161
Score = 52 (23.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 16/49 (32%), Positives = 19/49 (38%)
Query: 293 NATYQ---IFSCPDKCPENRTCINN-QCVCPPRRTGPDCQEEICPNECH 337
N TY F C D C + +C+C P GP C CP H
Sbjct: 365 NGTYGEDCAFVCAD-CGSGHCDFQSGRCLCSPGVHGPHCNLT-CPPGLH 411
Score = 49 (22.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 309 RTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
R+C NNQC C + P C+++ +C E C+
Sbjct: 209 RSC-NNQCAC---NSSP-CEQQSGRCQCRERTFGARCE 241
Score = 47 (21.6 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 318 CPPRRTGPDCQEEICPNECHE 338
CPP G DC + C CHE
Sbjct: 406 CPPGLHGVDCAQA-C--SCHE 423
Score = 43 (20.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 312 INNQCVCPPRRTGPDCQEEICP 333
++ C C P G C+E CP
Sbjct: 254 VDGTCSCEPGYRGKYCREP-CP 274
Score = 37 (18.1 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 6/10 (60%), Positives = 6/10 (60%)
Query: 318 CPPRRTGPDC 327
CPP R G C
Sbjct: 331 CPPCRDGHSC 340
>DICTYBASE|DDB_G0274177 [details] [associations]
symbol:DDB_G0274177 "EGF-like domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030587
"sorocarp development" evidence=IMP] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 dictyBase:DDB_G0274177
EMBL:AAFI02000012 GO:GO:0030587 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR013111 Pfam:PF07974
RefSeq:XP_644286.1 ProteinModelPortal:Q86AS3
EnsemblProtists:DDB0232015 GeneID:8619714 KEGG:ddi:DDB_G0274177
InParanoid:Q86AS3 OMA:GFGSCNN Uniprot:Q86AS3
Length = 1918
Score = 150 (57.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 40/123 (32%), Positives = 54/123 (43%)
Query: 29 FNASLCYNKC---IYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECH 85
++ S C N C YG C + +C C G+ GVDCS C N+ C G G+C
Sbjct: 669 YSTSACPNNCGGSAYGTCNA--NKTCTCNAGFAGVDCSKPTQCVNN--C-SGNGVC---- 719
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHG---NSVLGVCDSITGECICQDNTQGK 142
CQ C G YG+++ C + G N G C+ TG C C+D QG
Sbjct: 720 ---VNGFCQ-CFDG-YGDSSCSAKILNCPVGAGGAPCNGFYGACNPATGVCTCRDGYQGS 774
Query: 143 NCE 145
C+
Sbjct: 775 ACD 777
Score = 144 (55.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 102/381 (26%), Positives = 139/381 (36%)
Query: 12 TAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCS---VNCLC 68
+A DD L +C V + N+ +C N+ +C CQC+ + GVDCS V C
Sbjct: 774 SACDDRLIQCPVAM----NSIVC-NRLDINWCDTTTG-KCQCDPNFQGVDCSLPLVQCPL 827
Query: 69 NNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSV---LGV 125
C G G C+ TG C C GS+ A +C N G V G
Sbjct: 828 YGGKVC-GGFGTCNN----QTGV-CS-CD-GSHQGADCSLPFIQCPLN--GGKVCGGFGT 877
Query: 126 CDSITGECICQDNTQGKNCE----RCLPGYYGDPTDG---GTCYYQCMARGMLTGPGPQG 178
C++ TG C C + QG +C +C P + +P G G C Q L G QG
Sbjct: 878 CNNQTGVCTCDGSHQGTSCSLPFVQC-PISFLNPCGGSKRGNCNNQIGVCNCLAGY--QG 934
Query: 179 LGSGLA--ERNAWEGKDTPS-RECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNENAV 235
L L + D C G +S D L P I P N V
Sbjct: 935 LDCSLPFIKCPTINSNDCSGFGSCNNQTGICACDSSHQSTDCSL----PFIQCPLNGGKV 990
Query: 236 YIYDGLPDF---VTSVGGTHQSTTLGVFCTEDMHRGYEV-LEAKSGVMTIHYKQGKPS-- 289
G D + + G+HQ G C++ + V + SG + + + G S
Sbjct: 991 CSSFGTCDNQIGICTCDGSHQ----GNDCSKTFVQCPSVNSNSCSGFGSCNNETGACSCN 1046
Query: 290 EG-FNATYQIFSCP-DKCPENRTCINN--QCVCPPRRTGPDCQEEI--CP----NECHEF 339
G N C C + TC N +C C G DC CP N+C F
Sbjct: 1047 SGRLNNDCSGIQCDVPNCNSHGTCNNTIGKCQCDSSHQGSDCSTPFIDCPSINLNDCSGF 1106
Query: 340 LNHGTCDLLLTGVHITHGRTL 360
G+C+ G+TL
Sbjct: 1107 ---GSCNNQTGTCTCNSGKTL 1124
Score = 137 (53.3 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 59/187 (31%), Positives = 78/187 (41%)
Query: 28 IFNASLCYNKCI--YGYCKGPPDYSCQCELGWTGVDCSV-NCL-----CNNHSTCVHGIG 79
+ N C N C G C +C CE G++G DCS NC CN TC G
Sbjct: 596 VSNDHRCPNDCSGNQGICDLSTG-TCYCESGYSGSDCSFKNCGSSVPDCNGAGTCNGATG 654
Query: 80 ICDECHDWTTGDHCQY----CRAGSYGNAT-TQEGCRKCDCNSHGNSVLGV-CDSITGEC 133
+C C GD+CQY C G+A T + C CN+ GV C T +C
Sbjct: 655 LCT-CDSTHVGDYCQYSTSACPNNCGGSAYGTCNANKTCTCNA---GFAGVDCSKPT-QC 709
Query: 134 I--CQDNTQGKN--CERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAW 189
+ C N N C+ C GY GD + C A+ +L P +G+G A N +
Sbjct: 710 VNNCSGNGVCVNGFCQ-CFDGY-GDSS--------CSAK-ILNCP----VGAGGAPCNGF 754
Query: 190 EGKDTPS 196
G P+
Sbjct: 755 YGACNPA 761
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 43/145 (29%), Positives = 57/145 (39%)
Query: 28 IFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCS---VNCLCNNHSTCVHGIGICDEC 84
I++ SLC +G C C C+ G DCS + C N C G G C+
Sbjct: 1248 IYSNSLCGGSS-FGSCNNQTGV-CTCDGSQQGADCSLPLIQCPSINSKDC-SGFGSCNN- 1303
Query: 85 HDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
TG C C G N + C +CN HG CD+ G C C + QG +C
Sbjct: 1304 ---ETGI-CS-CNLGRLNNDCSGIQCGSPNCNGHGT-----CDTTLGVCKCDSSHQGNDC 1353
Query: 145 E----RCLPGYYGDPTDG-GTCYYQ 164
+C P + G G+C Q
Sbjct: 1354 SLPFIKC-PSINSNDCSGFGSCNNQ 1377
Score = 130 (50.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 43/132 (32%), Positives = 55/132 (41%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCS---VNCLCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
+G C CQC+ G DCS ++C N + C G G C+ TG C C
Sbjct: 1067 HGTCNNTIG-KCQCDSSHQGSDCSTPFIDCPSINLNDC-SGFGSCNN----QTGT-CT-C 1118
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG--YYGD 154
+G + T C DCN HG CD+ G+C C + QG +C L YG
Sbjct: 1119 NSGKTLSDCTGIQCSVPDCNGHGT-----CDTNIGKCQCDSSHQGADCSLPLVQCPLYGG 1173
Query: 155 PTDG--GTCYYQ 164
G GTC Q
Sbjct: 1174 KVCGNFGTCNNQ 1185
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 85/348 (24%), Positives = 129/348 (37%)
Query: 51 CQCELGWTGVDCS---VNC------LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSY 101
CQC+ G DCS V C +C N TC + G+C C G C + +
Sbjct: 1150 CQCDSSHQGADCSLPLVQCPLYGGKVCGNFGTCNNQTGVCS-CDSSHQGSDC----SSPF 1204
Query: 102 GNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE----RCLPGYYGDPTD 157
T NS+ S G C++ TG C C + QG +C +C P Y +
Sbjct: 1205 VKCPT--------VNSNDCSDFGSCNNQTGSCSCDSSHQGADCSLPFIQC-P-IYSNSLC 1254
Query: 158 GGTCYYQCMAR-GMLTGPGPQ-GLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPA 215
GG+ + C + G+ T G Q G L + S++C G +N T
Sbjct: 1255 GGSSFGSCNNQTGVCTCDGSQQGADCSLP---LIQCPSINSKDCS---GFGSCNNETGIC 1308
Query: 216 DIILLRLQPDIN-VPCNENAVYIYDGLPDFVTSV---GGTHQSTTLGV-F--C---TEDM 265
L RL D + + C + G D V +HQ + F C +
Sbjct: 1309 SCNLGRLNNDCSGIQCGSPNCNGH-GTCDTTLGVCKCDSSHQGNDCSLPFIKCPSINSND 1367
Query: 266 HRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINN--QCVCPPRRT 323
G+ ++GV + + G+ + S P+ C C + +C C
Sbjct: 1368 CSGFGSCNNQTGVCSCN--SGRALSDCSGIE--CSVPN-CNNGGVCDTSIGKCQCDSSHQ 1422
Query: 324 GPDCQEEI--CPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVDLIRC 369
G DC + CPN C F G+C+ TG+ + L+ I+C
Sbjct: 1423 GNDCNIPLIQCPNLCSGF---GSCNNQ-TGICSCNSGRLNNDCSGIQC 1466
Score = 111 (44.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 42/138 (30%), Positives = 55/138 (39%)
Query: 38 CIYGYCK---GPPDYSCQCELGWTGVDCSVNC---LCNN-HSTCVHGIGICDECHDWTTG 90
C+ G+C+ G D SC ++ ++C V CN + C G+C C D G
Sbjct: 719 CVNGFCQCFDGYGDSSCSAKI----LNCPVGAGGAPCNGFYGACNPATGVCT-CRDGYQG 773
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL-- 148
C R A C + D N CD+ TG+C C N QG +C L
Sbjct: 774 SACDD-RLIQCPVAMNSIVCNRLDINW--------CDTTTGKCQCDPNFQGVDCSLPLVQ 824
Query: 149 -PGYYGDPTDG-GTCYYQ 164
P Y G G GTC Q
Sbjct: 825 CPLYGGKVCGGFGTCNNQ 842
Score = 92 (37.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 38/133 (28%), Positives = 52/133 (39%)
Query: 36 NKCI-YGYCKGPPDYSCQCELGWTGVDCSVNCL-CNNHSTCVHGIGICDECHDWTTGDHC 93
N C +G C SC C+ G DCS+ + C +S + G C++ T C
Sbjct: 1213 NDCSDFGSCNNQTG-SCSCDSSHQGADCSLPFIQCPIYSNSLCGGSSFGSCNNQTGVCTC 1271
Query: 94 QYCRAGSYGNATTQEGCRKC-DCNSHGNSVLGVCDSITGECICQDNTQGKNCE--RCLPG 150
GS A +C NS S G C++ TG C C +C +C
Sbjct: 1272 D----GSQQGADCSLPLIQCPSINSKDCSGFGSCNNETGICSCNLGRLNNDCSGIQC--- 1324
Query: 151 YYGDPT-DG-GTC 161
G P +G GTC
Sbjct: 1325 --GSPNCNGHGTC 1335
Score = 84 (34.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 22/65 (33%), Positives = 31/65 (47%)
Query: 290 EGFNATYQIFSCPDKCPENRTCINNQ---CVCPPRRTGPDCQEEIC--PNECHEFLNHGT 344
+G + + CP+ C +C NNQ C C R DC C PN C+ +HGT
Sbjct: 1422 QGNDCNIPLIQCPNLCSGFGSC-NNQTGICSCNSGRLNNDCSGIQCDVPN-CN---SHGT 1476
Query: 345 CDLLL 349
CD+ +
Sbjct: 1477 CDITI 1481
Score = 44 (20.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 300 SCPDKCPENRTCINN--QCVCPPRRTGPDC 327
SCP C N C + +C C DC
Sbjct: 1583 SCPSNCLGNGICNTSTGECKCNSGYGSYDC 1612
>ZFIN|ZDB-GENE-081030-4 [details] [associations]
symbol:lamb2 "laminin, beta 2 (laminin S)"
species:7955 "Danio rerio" [GO:0016203 "muscle attachment"
evidence=IMP] [GO:0070831 "basement membrane assembly"
evidence=IMP] [GO:0061053 "somite development" evidence=IMP]
ZFIN:ZDB-GENE-081030-4 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 HOGENOM:HOG000007552
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:3913 KO:K06243 OrthoDB:EOG4KSPHW
EMBL:AL953864 IPI:IPI00499348 RefSeq:NP_001229974.1
UniGene:Dr.158661 UniGene:Dr.78258 Ensembl:ENSDART00000012166
Ensembl:ENSDART00000147326 GeneID:337767 KEGG:dre:337767
NextBio:20812405 Uniprot:B7ZDA6
Length = 1782
Score = 189 (71.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 48/134 (35%), Positives = 60/134 (44%)
Query: 43 CKGPPDYS--CQ-CELG-WTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCR 97
C+ P Y C C+ G W +C C CN H+ C G C C T GD C+ C
Sbjct: 836 CR-PGAYGQRCDGCQAGHWGFPNCRP-CQCNGHADECHQRTGACLNCRSNTAGDKCERCA 893
Query: 98 AGSYGNATTQEG--CRKCDCNSHGNS---VLGVC--DSITGECICQDNT--QGKNCERCL 148
G YGN G CR C C NS C D+ + + +C N G C+ C
Sbjct: 894 NGYYGNPVLGLGSQCRPCPCPEGPNSGRHFAASCYQDNRSQQVVCNCNQGYTGPRCDECA 953
Query: 149 PGYYGDPTD-GGTC 161
PGY+GDP+ GG C
Sbjct: 954 PGYFGDPSKPGGQC 967
Score = 179 (68.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 51/158 (32%), Positives = 73/158 (46%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTT 89
N + C KC C G +S QC D +V N + G G+CD C T
Sbjct: 324 NTNAC-KKC---NCNG---HSNQCHF-----DMAVYLATGN----ISG-GVCDNCLHNTM 366
Query: 90 GDHCQYCRAGSYGNATTQ---EG-CRKCDCNSHGNSVLGVCDS--------ITGECICQD 137
G +C+ C+ Y + T G C CDC+ G+ GVCD I G+C C+D
Sbjct: 367 GSNCESCKPFYYQDPTRDIRDPGVCVACDCDPDGSKNGGVCDGHDDPSLGMIAGQCRCKD 426
Query: 138 NTQGKNCERCLPGYYG-DPTDGGTCY-YQCMARGMLTG 173
N +G C++C PG++G +D C +C RG ++G
Sbjct: 427 NVEGSRCDKCKPGFFGLSASDPRGCQPCKCDPRGTVSG 464
Score = 169 (64.5 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 40/142 (28%), Positives = 61/142 (42%)
Query: 15 DDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQ-CELGWTGVDCSVNCLCNNHST 73
D +C + LY C + C GY +C+ C + G + S CL +
Sbjct: 985 DKRTGQC-LKCLYNTEGPDC-SVCRSGYYGDASRRNCRKCTCNFLGTERS-QCLSRDDCV 1041
Query: 74 CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGEC 133
C G C +C G C +C S+ N + +GC C C+ + N+ C+ TG+C
Sbjct: 1042 CQRATGQC-QCLPNVIGQTCDHCAPNSW-NLASGQGCEPCACDPN-NAYTSACNEFTGQC 1098
Query: 134 ICQDNTQGKNCERCLPGYYGDP 155
C+ GK C C ++GDP
Sbjct: 1099 QCRVGFGGKTCTDCQENHWGDP 1120
Score = 169 (64.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 53/155 (34%), Positives = 67/155 (43%)
Query: 41 GYCKGPPDYS---CQ-CELGWTGVD---CSVNCLCNNHST----CVHGIGICDECHDWTT 89
G C+ P+ S C+ C G G C + C C+ + C G C C
Sbjct: 784 GQCRCRPNISGRRCEKCAPGAYGFGPSGCKL-CECSLEGSQSRFCDLYSGQCP-CRPGAY 841
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCL 148
G C C+AG +G CR C CN H + C TG C+ C+ NT G CERC
Sbjct: 842 GQRCDGCQAGHWGFPN----CRPCQCNGHADE----CHQRTGACLNCRSNTAGDKCERCA 893
Query: 149 PGYYGDPTDG-GTCYYQCMARGMLTGPGPQGLGSG 182
GYYG+P G G+ QC P P+G SG
Sbjct: 894 NGYYGNPVLGLGS---QCRPC-----PCPEGPNSG 920
Score = 168 (64.2 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 41/121 (33%), Positives = 56/121 (46%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
++C GY P QC+ CS N ++ +C G C +C T G C
Sbjct: 950 DECAPGYFGDPSKPGGQCQ----PCRCSNNIDLSDPESCDKRTGQCLKCLYNTEGPDCSV 1005
Query: 96 CRAGSYGNATTQEGCRKCDCNSHG---NSVLG----VCDSITGECICQDNTQGKNCERCL 148
CR+G YG+A+ + CRKC CN G + L VC TG+C C N G+ C+ C
Sbjct: 1006 CRSGYYGDAS-RRNCRKCTCNFLGTERSQCLSRDDCVCQRATGQCQCLPNVIGQTCDHCA 1064
Query: 149 P 149
P
Sbjct: 1065 P 1065
Score = 157 (60.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 36/117 (30%), Positives = 55/117 (47%)
Query: 50 SCQCELGWTGVDCSVNC-LCNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NAT 105
+C C+ D S N +C+ H G+ G C C D G C C+ G +G +A+
Sbjct: 393 ACDCD-----PDGSKNGGVCDGHDDPSLGMIAGQC-RCKDNVEGSRCDKCKPGFFGLSAS 446
Query: 106 TQEGCRKCDCNSHGN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
GC+ C C+ G S CD ++G+C C+ G +C +CLP ++ D C
Sbjct: 447 DPRGCQPCKCDPRGTVSGSSQCDPVSGDCFCKRLVTGHSCNQCLPEHWALSHDTSGC 503
Score = 155 (59.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 37/108 (34%), Positives = 56/108 (51%)
Query: 51 CQCELGW-TGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEG 109
C C G +G + +C +N S V +C+ C+ TG C C G +G+ + G
Sbjct: 911 CPCPEGPNSGRHFAASCYQDNRSQQV----VCN-CNQGYTGPRCDECAPGYFGDPSKPGG 965
Query: 110 -CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGD 154
C+ C C+++ + S CD TG+C+ C NT+G +C C GYYGD
Sbjct: 966 QCQPCRCSNNIDLSDPESCDKRTGQCLKCLYNTEGPDCSVCRSGYYGD 1013
Score = 147 (56.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/112 (32%), Positives = 49/112 (43%)
Query: 58 TGVDCSVNCLC--NNH--STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKC 113
+G C C C NN S C G C +C G C C+ +G+ CR C
Sbjct: 1072 SGQGCEP-CACDPNNAYTSACNEFTGQC-QCRVGFGGKTCTDCQENHWGDPRVL--CRAC 1127
Query: 114 DCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
DC+ G C+ +TG C+CQ G C++C G+ G D C+ QC
Sbjct: 1128 DCDPRGIES-SQCNRMTGHCVCQQGVSGVRCDQCARGFSGTFPDCKPCH-QC 1177
Score = 130 (50.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 36/123 (29%), Positives = 52/123 (42%)
Query: 43 CKGPPDYS-C-QCELGWTGVDCS-----VNCLCNNHSTCVHGIGICDE------CHDWTT 89
CK + S C +C+ G+ G+ S C C+ T V G CD C T
Sbjct: 424 CKDNVEGSRCDKCKPGFFGLSASDPRGCQPCKCDPRGT-VSGSSQCDPVSGDCFCKRLVT 482
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
G C C + + GCR CDC+ G + C TG+C C+ + G+ C +
Sbjct: 483 GHSCNQCLPEHWALSHDTSGCRGCDCDV-GGATENQCSMETGQCQCRSHMIGRQCNQVES 541
Query: 150 GYY 152
GY+
Sbjct: 542 GYF 544
Score = 41 (19.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 303 DKCPENRTCINNQCVCPPRRTGPDCQEEICPN 334
D C R QC C P G C + PN
Sbjct: 1038 DDCVCQRA--TGQCQCLPNVIGQTC-DHCAPN 1066
Score = 40 (19.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTG 351
QC C P +G C++ C + F G C+ L G
Sbjct: 785 QCRCRPNISGRRCEK--CAPGAYGFGPSGCKLCECSLEG 821
Score = 40 (19.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 291 GFNAT-YQIFSCPDKCPENRTC--INNQCVCPPRRTGPDC 327
GF + ++ C + ++R C + QC C P G C
Sbjct: 806 GFGPSGCKLCECSLEGSQSRFCDLYSGQCPCRPGAYGQRC 845
Score = 38 (18.4 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 7/14 (50%), Positives = 7/14 (50%)
Query: 316 CVCPPRRTGPDCQE 329
C C TGP C E
Sbjct: 938 CNCNQGYTGPRCDE 951
>UNIPROTKB|I3LVI7 [details] [associations]
symbol:NOTCH2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005634
GO:GO:0008285 GO:GO:0009986 GO:GO:0005887 GO:GO:0016049
GO:GO:0046849 GO:GO:0005509 GO:GO:0007050 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0009887 PROSITE:PS01186 PROSITE:PS00010
GO:GO:0046579 GeneTree:ENSGT00700000104305
Ensembl:ENSSSCT00000031447 OMA:FRPCEAS Uniprot:I3LVI7
Length = 504
Score = 146 (56.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 48/152 (31%), Positives = 64/152 (42%)
Query: 36 NKCIYGYCKGP-PDYSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGD 91
N CI+G C G Y C C+ GW G++C V+ CL + C +G G CD G
Sbjct: 307 NPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSD---PCQNG-GTCDNL---VNGY 359
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLP 149
C C+ G G+ Q +C N N G C D I+G C C GKNC+ L
Sbjct: 360 RCT-CKKGFKGH-NCQVNIDECASNPCLNQ--GTCFDDISGYTCHCVLPYTGKNCQTVLA 415
Query: 150 GYYGDPTDGGTCYYQCM---ARGMLTGPGPQG 178
+P + + + L PG QG
Sbjct: 416 PCSPNPCENAAVCKEAPNFESYTCLCAPGWQG 447
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 90/335 (26%), Positives = 123/335 (36%)
Query: 36 NKCIY-GYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
N C+ G C + + C C G+TG C ++ + + C++G +C D G C
Sbjct: 81 NPCVNSGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGA----KCIDHPNGYEC 136
Query: 94 QYCRAGSYGNATTQEGCRKCD---CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
Q C G G +E CD C+ HG G+ DS T CIC G C +
Sbjct: 137 Q-CATGFTG-VLCEENIDNCDPDPCH-HGQCQDGI-DSYT--CICNPGYMGAICSDQIDE 190
Query: 151 YYGDPT-DGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIG 204
Y P + G C YQC + PG G+ E N + P + + G
Sbjct: 191 CYSSPCLNEGRCIDLVNGYQCNCQ-----PGTSGVN---CEINFDDCASNPCVHGVCVDG 242
Query: 205 QSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDF--VTSVGGTHQSTTLG 258
+ S +P R DI+ PC + A I D + F + G H S
Sbjct: 243 VNRYSCVCSPG-FTGQRCNIDIDECASNPCRKGATCIND-VNGFRCMCPEGPHHPSCYSQ 300
Query: 259 VF-CTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSC-PDKCPENRTCIN--N 314
V C + SG + G G N C D C TC N N
Sbjct: 301 VNECLSNPCIHGNCTGGLSGYKCL-CDAGWV--GINCEVDKNECLSDPCQNGGTCDNLVN 357
Query: 315 --QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
+C C G +CQ I +EC + LN GTC
Sbjct: 358 GYRCTCKKGFKGHNCQVNI--DECASNPCLNQGTC 390
Score = 134 (52.2 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 45/150 (30%), Positives = 56/150 (37%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KCI P Y CQC G+TGV C N + C HG +C D
Sbjct: 121 CLNGAKCI----DHPNGYECQCATGFTGVLCEENIDNCDPDPCHHG-----QCQDGIDSY 171
Query: 92 HCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCL 148
C C G G + + C C + G + D + G +C CQ T G NCE
Sbjct: 172 TC-ICNPGYMGAICSDQIDECYSSPCLNEGRCI----DLVNGYQCNCQPGTSGVNCEINF 226
Query: 149 PGYYGDPTDGGTCY-----YQCMARGMLTG 173
+P G C Y C+ TG
Sbjct: 227 DDCASNPCVHGVCVDGVNRYSCVCSPGFTG 256
Score = 108 (43.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 41/146 (28%), Positives = 60/146 (41%)
Query: 34 CYNK-CIY-GYCKGPPD-YSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDW 87
CY+ C+ G C + Y C C+ G +GV+C +N C N CVHG+ C D
Sbjct: 191 CYSSPCLNEGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASN---PCVHGV-----CVDG 242
Query: 88 TTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNC-- 144
C C G G + +C N + D + G C+C + +C
Sbjct: 243 VNRYSC-VCSPGFTGQRCNID-IDECASNPCRKGATCIND-VNGFRCMCPEGPHHPSCYS 299
Query: 145 --ERCL--PGYYGDPTDGGTCYYQCM 166
CL P +G+ T GG Y+C+
Sbjct: 300 QVNECLSNPCIHGNCT-GGLSGYKCL 324
Score = 74 (31.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQEEICPNEC 336
+G + I C K C + C N Q C CPP +G DC+E+I ++C
Sbjct: 446 QGQRCSVDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDI--DDC 495
Score = 64 (27.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 21/60 (35%), Positives = 28/60 (46%)
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTGVHIT--HGRTLHY-QVDLIRC 369
+C+C G +C E+ NEC N GTCD L+ G T G H QV++ C
Sbjct: 322 KCLCDAGWVGINC--EVDKNECLSDPCQNGGTCDNLVNGYRCTCKKGFKGHNCQVNIDEC 379
Score = 58 (25.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 20/67 (29%), Positives = 26/67 (38%)
Query: 288 PSEGFNATYQIFSC-PDKCPENRTCIN--N----QCVCPPRRTGPDCQEEICPNEC--HE 338
P G N + C P+ C C N C+C P G C +I +EC
Sbjct: 404 PYTGKNCQTVLAPCSPNPCENAAVCKEAPNFESYTCLCAPGWQGQRCSVDI--DECISKP 461
Query: 339 FLNHGTC 345
+NHG C
Sbjct: 462 CMNHGLC 468
Score = 55 (24.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 18/58 (31%), Positives = 23/58 (39%)
Query: 287 KPSEGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNEC 336
K +G N I C C TC ++ C C TG +CQ + C PN C
Sbjct: 365 KGFKGHNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPC 422
>UNIPROTKB|Q9H1U4 [details] [associations]
symbol:MEGF9 "Multiple epidermal growth factor-like domains
protein 9" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001368
SMART:SM00208 GO:GO:0016021 EMBL:CH471090 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 EMBL:AL138836 EMBL:AK295380 EMBL:AY358370
EMBL:AB011542 IPI:IPI00401283 RefSeq:NP_001073966.2
UniGene:Hs.741238 ProteinModelPortal:Q9H1U4 SMR:Q9H1U4
STRING:Q9H1U4 PhosphoSite:Q9H1U4 DMDM:116242627 PaxDb:Q9H1U4
PRIDE:Q9H1U4 DNASU:1955 Ensembl:ENST00000373930 GeneID:1955
KEGG:hsa:1955 UCSC:uc022bms.1 CTD:1955 GeneCards:GC09M123363
HGNC:HGNC:3234 HPA:HPA014319 MIM:604268 neXtProt:NX_Q9H1U4
eggNOG:NOG302694 HOGENOM:HOG000234343 HOVERGEN:HBG080442
InParanoid:Q9H1U4 OrthoDB:EOG43R3MN PhylomeDB:Q9H1U4
GenomeRNAi:1955 NextBio:7923 ArrayExpress:Q9H1U4 Bgee:Q9H1U4
CleanEx:HS_MEGF9 Genevestigator:Q9H1U4 GermOnline:ENSG00000106780
Uniprot:Q9H1U4
Length = 602
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 70/217 (32%), Positives = 95/217 (43%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT 105
PP+Y C C + G +VN CN + G C EC G HC+ C+ G Y N T
Sbjct: 199 PPEYVCNCSV--VG-SLNVN-RCNQTT------GQC-ECRPGYQGLHCETCKEGFYLNYT 247
Query: 106 TQEGCRKCDCNSHGNSVLGV-CDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCY-Y 163
+ C+ CDC+ HG L + C+S +G+C C+ G C+RC GYYG +G C
Sbjct: 248 SGL-CQPCDCSPHG--ALSIPCNS-SGKCQCKVGVIGSICDRCQDGYYGFSKNG--CLPC 301
Query: 164 QCMARGM----LTGP--GPQGLGSGLAERNAWEG-KDTP--SRECLWIIGQSLDSNSTAP 214
QC R LTG Q G EG +P ++ECL ++ ST
Sbjct: 302 QCNNRSASCDALTGACLNCQENSKGNHCEECKEGFYQSPDATKECLRCPCSAV--TSTGS 359
Query: 215 ADIILLRLQPD--------INVPCN--ENAVYIYDGL 241
I L+P+ I CN EN Y +D +
Sbjct: 360 CSIKSSELEPECDQCKDGYIGPNCNKCENGYYNFDSI 396
Score = 156 (60.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 38/120 (31%), Positives = 59/120 (49%)
Query: 43 CK-GPPDYSC-QCELGWTGVDCS--VNCLCNNHS-TCVHGIGICDECHDWTTGDHCQYCR 97
CK G C +C+ G+ G + + C CNN S +C G C C + + G+HC+ C+
Sbjct: 274 CKVGVIGSICDRCQDGYYGFSKNGCLPCQCNNRSASCDALTGACLNCQENSKGNHCEECK 333
Query: 98 AGSYGNATTQEGCRKCDCNSHGNSVLGVCD----SITGECI-CQDNTQGKNCERCLPGYY 152
G Y + + C +C C++ ++ G C + EC C+D G NC +C GYY
Sbjct: 334 EGFYQSPDATKECLRCPCSAVTST--GSCSIKSSELEPECDQCKDGYIGPNCNKCENGYY 391
Score = 154 (59.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 37/101 (36%), Positives = 50/101 (49%)
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLG--VCDSITGECI-CQD 137
CD+C D G +C C G Y + CRKC C+ H + V +C +GECI C
Sbjct: 371 CDQCKDGYIGPNCNKCENGYYNFDSI---CRKCQCHGHVDPVKTPKICKPESGECINCLH 427
Query: 138 NTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQG 178
NT G CE CL GY D +G C+ + ++ P P+G
Sbjct: 428 NTTGFWCENCLEGYVHD-LEGN-----CIKKEVIL-PTPEG 461
>UNIPROTKB|J9NS51 [details] [associations]
symbol:NOTCH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0030154 GO:GO:0006355 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
Pfam:PF12661 GeneTree:ENSGT00700000104305 SUPFAM:SSF90193
InterPro:IPR024600 Pfam:PF11936 EMBL:AAEX03006755 EMBL:AAEX03006746
EMBL:AAEX03006747 EMBL:AAEX03006748 EMBL:AAEX03006749
EMBL:AAEX03006750 EMBL:AAEX03006751 EMBL:AAEX03006752
EMBL:AAEX03006753 EMBL:AAEX03006754 Ensembl:ENSCAFT00000049964
Uniprot:J9NS51
Length = 2272
Score = 169 (64.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 85/322 (26%), Positives = 122/322 (37%)
Query: 38 CIYGYCKGPPD-YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHCQY 95
C G C D Y C CE G+TG C+VN C + C HG G C+ D C+
Sbjct: 349 CESGTCLDRIDGYECACEPGYTGSMCNVNIDECAGNP-CHHG-GTCE---DGINSFMCR- 402
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYYG 153
C G +G E +C N + G C DS+ G +C C G NC+
Sbjct: 403 CPEGYHGPTCLSE-VNECSSNP---CIHGACRDSLNGYKCDCDPGWSGANCDVNNNECES 458
Query: 154 DP-TDGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAW-EGK---DTPSRECLWII 203
+P +GG C Y C R +GP Q + A +G D +C +
Sbjct: 459 NPCANGGACRDMTSGYVCTCREGFSGPNCQTNINECASNPCLNQGSCIDDVAGYKCNCPL 518
Query: 204 GQSLDSNSTAPADIILLRLQPDINVPC-NENAVYIYDGLPDF--VTSVGGTHQSTTLGVF 260
+ A +++L P PC N A + F + G Q+ + +
Sbjct: 519 PYT-----GATCEVVLAPCAPS---PCRNGGACKESEDYESFSCICPTGWQGQTCEVDIN 570
Query: 261 -CTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSC-PDKCPENRTC---INNQ 315
C + R + +G H + G G N + C P+ C +C +N
Sbjct: 571 ECVKTPCRNGASCQNTNGGYRCHCRAGYT--GRNCETDVDDCRPNPCHNGGSCTDGVNTA 628
Query: 316 -CVCPPRRTGPDCQEEICPNEC 336
C C P GP C+E+I NEC
Sbjct: 629 FCDCLPGFQGPFCEEDI--NEC 648
Score = 153 (58.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 43/130 (33%), Positives = 57/130 (43%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
N CI+G C+ + Y C C+ GW+G +C VN + C +G G C D T+G C
Sbjct: 422 NPCIHGACRDSLNGYKCDCDPGWSGANCDVNNNECESNPCANG-GAC---RDMTSGYVCT 477
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYY 152
CR G + Q +C N N G C D + G +C C G CE L
Sbjct: 478 -CREG-FSGPNCQTNINECASNPCLNQ--GSCIDDVAGYKCNCPLPYTGATCEVVLAPCA 533
Query: 153 GDPT-DGGTC 161
P +GG C
Sbjct: 534 PSPCRNGGAC 543
Score = 133 (51.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 45/151 (29%), Positives = 57/151 (37%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KC+ GP YSC C G+TG+ C V+ + C +G+ C D
Sbjct: 236 CKNGAKCL----DGPNTYSCMCTEGYTGLHCEVDIDECDPDPCHYGV-----CKDGVATF 286
Query: 92 HCQYCRAGSYGN--ATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERC 147
C C+ G G+ + C C HG G C C C T G NCE
Sbjct: 287 TC-LCQPGYTGHHCESNINECHSQPCR-HG----GTCQDRDNAYLCSCLKGTTGPNCETN 340
Query: 148 LPGYYGDPTDGGTCY-----YQCMARGMLTG 173
L P + GTC Y+C TG
Sbjct: 341 LDDCASSPCESGTCLDRIDGYECACEPGYTG 371
Score = 128 (50.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 45/145 (31%), Positives = 58/145 (40%)
Query: 41 GYCKGPPDY---SCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
G CK DY SC C GW G C V+ + C +G C + G C +CR
Sbjct: 541 GACKESEDYESFSCICPTGWQGQTCEVDINECVKTPCRNGAS----CQNTNGGYRC-HCR 595
Query: 98 AGSYG-NATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
AG G N T + CR C++ G+ GV T C C QG CE + +P
Sbjct: 596 AGYTGRNCETDVDDCRPNPCHNGGSCTDGVN---TAFCDCLPGFQGPFCEEDINECASNP 652
Query: 156 TDGGTCYYQCMARGMLTGP-GPQGL 179
G C+ T P G G+
Sbjct: 653 CRHGANCTDCVDSYTCTCPTGFSGI 677
Score = 127 (49.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 77/327 (23%), Positives = 117/327 (35%)
Query: 38 CIYGY-CKGP-PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
C +G C + C+C G TG+ C +N C ++ C G CD + G
Sbjct: 43 CFHGATCHDRVASFYCECPHGRTGLLCHLNDACISNP-CNEGSN-CDT--NPVNGKAICT 98
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYG 153
C +G G A +Q+ +C ++ G C + G EC C G CE +
Sbjct: 99 CPSGYTGPACSQD-VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECIS 157
Query: 154 DPTDG-GTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE---CLWIIGQSLDS 209
+P TC Q + PG +G+ E N E +P + CL I + L
Sbjct: 158 NPCQNDATCLDQIGEFQCICMPGYEGVH---CEVNTDECASSPCLQNGRCLDKINEFLCE 214
Query: 210 NSTA-PADIILLRLQPDINVPCNENAVYIYDGLPDF--VTSVG--GTHQSTTLGVFCTED 264
T + + + PC +N DG + + + G G H + +
Sbjct: 215 CPTGFTGHLCQYDVDECASTPC-KNGAKCLDGPNTYSCMCTEGYTGLHCEVDIDECDPDP 273
Query: 265 MHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDK-CPENRTCINNQ----CVCP 319
H G K GV T G + I C + C TC + C C
Sbjct: 274 CHYGV----CKDGVATFTCLCQPGYTGHHCESNINECHSQPCRHGGTCQDRDNAYLCSCL 329
Query: 320 PRRTGPDCQEEICPNECHEF-LNHGTC 345
TGP+C+ + ++C GTC
Sbjct: 330 KGTTGPNCETNL--DDCASSPCESGTC 354
Score = 123 (48.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 46/151 (30%), Positives = 62/151 (41%)
Query: 36 NKCIYGY-CKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGIC-DECHDWTTGDH 92
N C +G C D Y+C C G++G+ C N S+C +G G C D + +T
Sbjct: 651 NPCRHGANCTDCVDSYTCTCPTGFSGIHCENNTPDCTESSCFNG-GTCVDGINSFT---- 705
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNS--HGNSVLGVC-DSI-TGECICQDNTQGKNCERCL 148
C C G G+ Q +CD HG G C DS T C C G NC+ +
Sbjct: 706 C-LCPPGFTGSYC-QHDINECDSRPCLHG----GTCQDSYGTYRCTCPQGYTGLNCQNLV 759
Query: 149 PGYYGDPT-DGGTCY-----YQCMARGMLTG 173
P +GG C+ Y+C TG
Sbjct: 760 RWCDSSPCKNGGKCWQSNTLYRCECHSGWTG 790
Score = 121 (47.7 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 41/141 (29%), Positives = 54/141 (38%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQ 107
Y+C C GWTG DCS N + C HG CHD +C+ C G G
Sbjct: 18 YNCVCVNGWTGEDCSENIDDCASAACFHGA----TCHDRVASFYCE-CPHGRTGLLCHLN 72
Query: 108 EGCRKCDCNSHGNSVLGVCDS--ITGE--CICQDNTQGKNC----ERCLPGYYGDPTD-G 158
+ C CN N CD+ + G+ C C G C + C G +P +
Sbjct: 73 DACISNPCNEGSN-----CDTNPVNGKAICTCPSGYTGPACSQDVDECSLG--ANPCEHA 125
Query: 159 GTCY-----YQCMARGMLTGP 174
G C ++C TGP
Sbjct: 126 GKCINTLGSFECQCLQGYTGP 146
Score = 97 (39.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 43/159 (27%), Positives = 60/159 (37%)
Query: 36 NKCIYGYCKGPP-------DYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIG--I 80
N+CI C+ ++ C C G+ GV C VN C C + C+ I +
Sbjct: 153 NECISNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLQNGRCLDKINEFL 212
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C EC TG CQY E C C + + G T C+C +
Sbjct: 213 C-ECPTGFTGHLCQY---------DVDE-CASTPCKNGAKCLDG---PNTYSCMCTEGYT 258
Query: 141 GKNCE----RCLPG--YYGDPTDGGTCYYQCMARGMLTG 173
G +CE C P +YG DG + C+ + TG
Sbjct: 259 GLHCEVDIDECDPDPCHYGVCKDG-VATFTCLCQPGYTG 296
Score = 94 (38.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 42/135 (31%), Positives = 56/135 (41%)
Query: 32 SLCYNKCIY-GYCKGP-PDYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGICD- 82
SL N C + G C + CQC G+TG C ++ C+ C N +TC+ IG
Sbjct: 116 SLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQC 175
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS-ITGECICQ---D- 137
C G HC+ + Q G R C N L C + TG +CQ D
Sbjct: 176 ICMPGYEGVHCEVNTDECASSPCLQNG-R---CLDKINEFLCECPTGFTGH-LCQYDVDE 230
Query: 138 --NTQGKNCERCLPG 150
+T KN +CL G
Sbjct: 231 CASTPCKNGAKCLDG 245
Score = 82 (33.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 29/93 (31%), Positives = 42/93 (45%)
Query: 291 GFNATY---QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFL 340
G+ +Y Q+ C P C TC + C C G +C EE+ NEC H
Sbjct: 835 GYTGSYCEDQVDECSPSPCQNGATCTDYPGGYSCECVAGYHGVNCSEEM--NECLSHPCQ 892
Query: 341 NHGTC-DLLLT-GVHITHG-RTLHYQVDLIRCT 370
N GTC DL+ T G + +H +V++ C+
Sbjct: 893 NGGTCIDLINTYKCSCPRGTQGVHCEVNVDDCS 925
Score = 81 (33.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 291 GFNATYQIFSCPD----KCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHE--FL 340
GF+ + + PD C TC++ C+CPP TG CQ +I NEC L
Sbjct: 673 GFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQHDI--NECDSRPCL 730
Query: 341 NHGTC 345
+ GTC
Sbjct: 731 HGGTC 735
Score = 74 (31.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 287 KPSEGFNATYQIFSCPDKCPENRTCINN----QCVCPPRRTGPDCQ---EEICPNECHEF 339
K + G N + C E+ TC++ +C C P TG C +E N CH
Sbjct: 330 KGTTGPNCETNLDDCASSPCESGTCLDRIDGYECACEPGYTGSMCNVNIDECAGNPCH-- 387
Query: 340 LNHGTCD 346
+ GTC+
Sbjct: 388 -HGGTCE 393
Score = 70 (29.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 304 KCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC 336
KC N TC++ C CPP G C+ ++ NEC
Sbjct: 936 KCFNNGTCVDQVGGYSCTCPPGFVGERCEGDV--NEC 970
Score = 69 (29.3 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 296 YQIFSCPDKCP---ENRTC-IN-NQCVCPPRRTGPDCQEEICPNECH 337
Y+ FSC CP + +TC ++ N+CV P R G CQ CH
Sbjct: 549 YESFSCI--CPTGWQGQTCEVDINECVKTPCRNGASCQNTNGGYRCH 593
Score = 64 (27.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 290 EGFNATYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNECHEFLN 341
+G I C C +C N +C C TG +C+ ++ C PN CH N
Sbjct: 561 QGQTCEVDINECVKTPCRNGASCQNTNGGYRCHCRAGYTGRNCETDVDDCRPNPCH---N 617
Query: 342 HGTC 345
G+C
Sbjct: 618 GGSC 621
Score = 59 (25.8 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 19/64 (29%), Positives = 25/64 (39%)
Query: 290 EGF---NATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLN 341
EGF N I C C +CI++ +C CP TG C+ + P N
Sbjct: 480 EGFSGPNCQTNINECASNPCLNQGSCIDDVAGYKCNCPLPYTGATCEVVLAPCAPSPCRN 539
Query: 342 HGTC 345
G C
Sbjct: 540 GGAC 543
Score = 58 (25.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQEEI---CP--NECHEF 339
EG +C + C TCI+ C+C TGP+CQ C N C+
Sbjct: 1040 EGATCENDARACGSRRCLNGGTCISGPRSPTCLCLGPFTGPECQFPAGSPCVGGNPCY-- 1097
Query: 340 LNHGTCD 346
N G+C+
Sbjct: 1098 -NQGSCE 1103
Score = 55 (24.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 311 CINNQ-CVCPPRRTG-------PDCQEEICPN--ECHEFLNHGTC 345
C+++ C CP +G PDC E C N C + +N TC
Sbjct: 662 CVDSYTCTCPTGFSGIHCENNTPDCTESSCFNGGTCVDGINSFTC 706
Score = 51 (23.0 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 309 RTCINN-QCVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
R +N +C C P +G +C ++ NEC N G C + +G
Sbjct: 430 RDSLNGYKCDCDPGWSGANC--DVNNNECESNPCANGGACRDMTSG 473
Score = 48 (22.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C CP G C+ + LN GTC
Sbjct: 1033 CKCPAGFEGATCENDARACGSRRCLNGGTC 1062
Score = 45 (20.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 314 NQCVCPPRRTGPDCQEEI--C-PNECHEFLNHGTC 345
+ C C TG C++++ C P+ C N TC
Sbjct: 828 HHCRCQAGYTGSYCEDQVDECSPSPCQ---NGATC 859
Score = 43 (20.2 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 314 NQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVH 353
N+C P R G +C + + C TC +G+H
Sbjct: 646 NECASNPCRHGANCTDCVDSYTC-------TCPTGFSGIH 678
Score = 41 (19.5 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 329 EEICP-NECHEFLNHGTCDL 347
EE C ECHE + C L
Sbjct: 1145 EEACELPECHEEAGNKVCSL 1164
Score = 40 (19.1 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 316 CVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
C C TG C+ I N C N GTC
Sbjct: 992 CECRAGHTGRRCESII--NGCKGRPCQNGGTC 1021
>UNIPROTKB|F1M0Y7 [details] [associations]
symbol:Odz2 "Protein Odz2" species:10116 "Rattus
norvegicus" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 GO:GO:0016021 GO:GO:0007165 Gene3D:2.120.10.30
InterPro:IPR011042 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR008969 SUPFAM:SSF49464
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR006530
TIGRFAMs:TIGR01643 GeneTree:ENSGT00660000095277 InterPro:IPR022385
TIGRFAMs:TIGR03696 IPI:IPI00207350 Ensembl:ENSRNOT00000011922
ArrayExpress:F1M0Y7 Uniprot:F1M0Y7
Length = 2598
Score = 137 (53.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 46/155 (29%), Positives = 61/155 (39%)
Query: 34 CYNKCIYGYCKGPPDYS-CQCELGWTGVDCSVN-CL--CNNHSTCVHGIGICDE------ 83
C ++C G+ PD C C+ W G DCSV C C H C+ G C+E
Sbjct: 539 CPDQCS-GHGTYLPDSGLCNCDPNWMGPDCSVEVCSVDCGTHGVCIGGACRCEEGWTGAA 597
Query: 84 -----CHD-----WTTGD-HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
CH T D C+ CR G G T +GC CN +G LG + +
Sbjct: 598 CDQRVCHPRCIEHGTCKDGKCE-CREGWNGEHCTIDGCPDL-CNGNGRCTLG---QNSWQ 652
Query: 133 CICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQCM 166
C+CQ +G C + D D G C+
Sbjct: 653 CVCQTGWRGPGCNVAMETSCADNKDNEGDGLVDCL 687
Score = 136 (52.9 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIGICDECHDWTTGDHC 93
C G YS CQC GW G +C V C+ C H +C+ G +C + G+HC
Sbjct: 444 CSGNGQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCAAGYK---GEHC 500
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ + C C+SHG VC + GEC+C G NCE
Sbjct: 501 E------------EVDCLDPTCSSHG-----VC--VNGECLCSPGWGGLNCE 533
Score = 101 (40.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G N CPD+C + T + + C C P GPDC E+C +C HG C
Sbjct: 529 GLNCELARVQCPDQCSGHGTYLPDSGLCNCDPNWMGPDCSVEVCSVDCG---THGVC 582
Score = 82 (33.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C + CI C C TG C + +C C E HGTC
Sbjct: 572 CSVDCGTHGVCIGGACRCEEGWTGAACDQRVCHPRCIE---HGTC 613
Score = 75 (31.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDL 347
C +C E+ TC + +C C G C + CP+ C+ +G C L
Sbjct: 603 CHPRCIEHGTCKDGKCECREGWNGEHCTIDGCPDLCN---GNGRCTL 646
Score = 73 (30.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 284 KQGKPS--EGFNATY-QIFSCPDKCPENRTCI---NN-QCVCPPRRTGPDC 327
K GK EG+N + I CPD C N C N+ QCVC GP C
Sbjct: 614 KDGKCECREGWNGEHCTIDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGC 664
>UNIPROTKB|F1NMD6 [details] [associations]
symbol:JAG2 "Delta-like protein" species:9031 "Gallus
gallus" [GO:0005112 "Notch binding" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001007
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
InterPro:IPR018097 InterPro:IPR026219 Pfam:PF00008 Pfam:PF01414
Pfam:PF07645 Pfam:PF07657 PRINTS:PR02059 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051 SMART:SM00179
SMART:SM00181 SMART:SM00214 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
GeneTree:ENSGT00700000104308 EMBL:AADN02003825 EMBL:AADN02003826
EMBL:AADN02003827 EMBL:AADN02003828 IPI:IPI00601560
Ensembl:ENSGALT00000021553 Uniprot:F1NMD6
Length = 1149
Score = 151 (58.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 47/140 (33%), Positives = 62/140 (44%)
Query: 30 NASLCYNK-CIYGY-CKGP-PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGIC-DECH 85
+A+ C K C+ Y CK Y C C GW GV+C +N + + H C HG G C DE +
Sbjct: 423 DANECEGKPCVNAYSCKNLIGGYYCDCIPGWKGVNCHIN-INDCHGQCQHG-GTCKDEVN 480
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKN 143
D+ HC C G G E +C+ N N G C D + G C+C G
Sbjct: 481 DY----HC-ICPRGFTGKNCEIE-TNECESNPCQNG--GRCKDLVNGFTCLCAQGFSGVF 532
Query: 144 CERCLPGYYGDPTDGGT-CY 162
CE + +P G CY
Sbjct: 533 CEMDIDFCEPNPCQNGAKCY 552
Score = 128 (50.1 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 36/131 (27%), Positives = 49/131 (37%)
Query: 35 YNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC 93
Y C +G C P + C CE W G+ C+ + C NH C++G G C T D
Sbjct: 279 YPGCAHGSCNEP--WQCNCETNWGGLLCNKDLNYCGNHHPCLNG-GTCMN----TEPDEY 331
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGY 151
+ Y + C N N G C I+ +C C G C +
Sbjct: 332 RCACPDGYSGKNCEIAEHACVSNPCANG--GTCHEISSSFKCHCPSGWSGPTCAIDIDEC 389
Query: 152 YGDP-TDGGTC 161
+P GGTC
Sbjct: 390 ASNPCAQGGTC 400
Score = 125 (49.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 42/154 (27%), Positives = 61/154 (39%)
Query: 32 SLCYNKC--IYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTT 89
++C C ++G C P + C+C GW G C C + C HG C+E W
Sbjct: 243 AVCKQGCNLLHGGCSVPGE--CKCHYGWQGQYCDE---CVRYPGCAHGS--CNE--PW-- 291
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE---CICQDNTQGKNCER 146
C C ++G + C N H G C + + C C D GKNCE
Sbjct: 292 --QCN-CET-NWGGLLCNKDLNYCG-NHHPCLNGGTCMNTEPDEYRCACPDGYSGKNCEI 346
Query: 147 CLPGYYGDP-TDGGTCY-----YQCMARGMLTGP 174
+P +GGTC+ ++C +GP
Sbjct: 347 AEHACVSNPCANGGTCHEISSSFKCHCPSGWSGP 380
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 30 NASLCYNKCIYG-YCKGPPD-YSCQCELGWTGVDCSVNCL-CNNHSTCVHGIGICDECHD 86
N+S N C+ G C G D +SC C+ GW G C+ N CN H C +G GIC + +
Sbjct: 756 NSSCIPNPCMNGGTCVGSGDSFSCICKEGWEGRTCTQNTNDCNPHP-CYNG-GICVDGVN 813
Query: 87 WTTGDHCQYCRAGSYGN--ATTQEGCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKN 143
W C+ C G G + C+ C +G + + D I G C C G
Sbjct: 814 WF---RCE-CAPGFAGPDCRINIDECQSSPCG-YGATCI---DEINGYRCTCPPGRVGPR 865
Query: 144 CERCL 148
C+ +
Sbjct: 866 CQEVI 870
Score = 114 (45.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 42/141 (29%), Positives = 62/141 (43%)
Query: 36 NKC-IYGYCKGPP--DYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGICDECHD 86
N C +G C P +++C C+ G+TG+ C N CL C N TC+ DE
Sbjct: 608 NVCGPHGRCISQPGGNFTCACDRGFTGIYCHENINDCLGKPCKNGGTCI------DEVDS 661
Query: 87 WTTGDHCQYCRAGSYGNA--TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
+ C +C +G G T C C++ G + V D C C+++ +GK C
Sbjct: 662 FK----C-FCSSGWEGELCDTNFNDCSPNPCHNGGRCIDLVNDFY---CECKNDWKGKTC 713
Query: 145 ERCLPGYYGDP---TDGGTCY 162
Y D ++GGTCY
Sbjct: 714 HS--REYQCDANTCSNGGTCY 732
Score = 103 (41.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 38/132 (28%), Positives = 53/132 (40%)
Query: 21 CTVLLLYIFNASLCYNKCIYGYCKG--PPDYSCQCELGWTGVDCSVN---CLCNNHSTCV 75
C L Y N C N G C P +Y C C G++G +C + C+ N C
Sbjct: 304 CNKDLNYCGNHHPCLNG---GTCMNTEPDEYRCACPDGYSGKNCEIAEHACVSN---PCA 357
Query: 76 HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-EC 133
+G G C H+ ++ C +C +G + T +C N G C D I EC
Sbjct: 358 NG-GTC---HEISSSFKC-HCPSG-WSGPTCAIDIDECASNPCAQG--GTCIDHINSFEC 409
Query: 134 ICQDNTQGKNCE 145
IC G C+
Sbjct: 410 ICPQQWIGATCQ 421
Score = 101 (40.6 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 40/143 (27%), Positives = 54/143 (37%)
Query: 30 NASLCYNK-CIYG-YCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHD 86
N + C K C G C D + C C GW G C N + + C +G C D
Sbjct: 640 NINDCLGKPCKNGGTCIDEVDSFKCFCSSGWEGELCDTNFNDCSPNPCHNG----GRCID 695
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC--DSITGECICQDNTQGKNC 144
+C+ C+ + T +CD N+ N G C D T C C G C
Sbjct: 696 LVNDFYCE-CK-NDWKGKTCHSREYQCDANTCSNG--GTCYDDGDTFRCSCPPEWIGSTC 751
Query: 145 E-----RCLPGYYGDPT-DGGTC 161
C+P +P +GGTC
Sbjct: 752 NIAKNSSCIP----NPCMNGGTC 770
Score = 88 (36.0 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 24/68 (35%), Positives = 31/68 (45%)
Query: 290 EGFNATYQIFSCPDKCPENRTC---INN-QCVCPPRRTGPDCQEEICPNECHE--FLNHG 343
+G N I C +C TC +N+ C+CP TG +C EI NEC N G
Sbjct: 454 KGVNCHININDCHGQCQHGGTCKDEVNDYHCICPRGFTGKNC--EIETNECESNPCQNGG 511
Query: 344 TCDLLLTG 351
C L+ G
Sbjct: 512 RCKDLVNG 519
Score = 77 (32.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 18/46 (39%), Positives = 21/46 (45%)
Query: 291 GFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEI 331
G + I C C TCI+ +C CPP R GP CQE I
Sbjct: 825 GPDCRINIDECQSSPCGYGATCIDEINGYRCTCPPGRVGPRCQEVI 870
Score = 70 (29.7 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 291 GFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECH--EFLNHG 343
G I C C + TCI++ +C+CP + G CQ + NEC +N
Sbjct: 379 GPTCAIDIDECASNPCAQGGTCIDHINSFECICPQQWIGATCQLDA--NECEGKPCVNAY 436
Query: 344 TCDLLLTGVH 353
+C L+ G +
Sbjct: 437 SCKNLIGGYY 446
Score = 68 (29.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 299 FSCP-DKCPENRTCINN----QCVCPPRRTGPDC---QEEIC-PNECHEFLNHGTC 345
+ C + C TC ++ +C CPP G C + C PN C +N GTC
Sbjct: 718 YQCDANTCSNGGTCYDDGDTFRCSCPPEWIGSTCNIAKNSSCIPNPC---MNGGTC 770
Score = 68 (29.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 22/73 (30%), Positives = 29/73 (39%)
Query: 290 EGFNATYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEF-LNHG 343
EG T C P C C++ +C C P GPDC+ I +EC +G
Sbjct: 786 EGRTCTQNTNDCNPHPCYNGGICVDGVNWFRCECAPGFAGPDCRINI--DECQSSPCGYG 843
Query: 344 -TCDLLLTGVHIT 355
TC + G T
Sbjct: 844 ATCIDEINGYRCT 856
Score = 63 (27.2 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 20/68 (29%), Positives = 27/68 (39%)
Query: 288 PSEGFNATYQIF---SC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--H 337
P E +T I SC P+ C TC+ + C+C G C + N+C H
Sbjct: 743 PPEWIGSTCNIAKNSSCIPNPCMNGGTCVGSGDSFSCICKEGWEGRTCTQNT--NDCNPH 800
Query: 338 EFLNHGTC 345
N G C
Sbjct: 801 PCYNGGIC 808
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNEC 336
C EN IN+ C+ P + G C +E+ +C
Sbjct: 637 CHEN---IND-CLGKPCKNGGTCIDEVDSFKC 664
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/72 (23%), Positives = 26/72 (36%)
Query: 302 PDKCPENRTCIN--NQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRT 359
P+ C CI+ N C +C+ + CH CD ++G T
Sbjct: 684 PNPCHNGGRCIDLVNDFYC-------ECKNDWKGKTCHS--REYQCDANTC----SNGGT 730
Query: 360 LHYQVDLIRCTC 371
+ D RC+C
Sbjct: 731 CYDDGDTFRCSC 742
>RGD|727907 [details] [associations]
symbol:Tenm2 "teneurin transmembrane protein 2" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005102 "receptor binding" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISO;ISS;IDA] [GO:0005911 "cell-cell junction"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007157 "heterophilic cell-cell adhesion"
evidence=ISO;IDA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007411 "axon guidance" evidence=ISO;ISS] [GO:0007417 "central
nervous system development" evidence=TAS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016337 "cell-cell adhesion"
evidence=ISS] [GO:0016605 "PML body" evidence=ISS] [GO:0030054
"cell junction" evidence=ISS] [GO:0030175 "filopodium"
evidence=ISS] [GO:0030425 "dendrite" evidence=ISS] [GO:0030426
"growth cone" evidence=ISS] [GO:0035584 "calcium-mediated signaling
using intracellular calcium source" evidence=ISO;ISS] [GO:0042803
"protein homodimerization activity" evidence=ISO;ISS] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0045202 "synapse" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO;ISS] [GO:0050839 "cell
adhesion molecule binding" evidence=ISO;IDA] [GO:0051491 "positive
regulation of filopodium assembly" evidence=ISS] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 RGD:727907 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0005794 GO:GO:0007411 GO:GO:0042803 GO:GO:0016605
GO:GO:0045211 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0005102
GO:GO:0043197 GO:GO:0007417 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0000122 GO:GO:0030175 GO:GO:0030426
PROSITE:PS01186 GO:GO:0046982 InterPro:IPR008969 SUPFAM:SSF49464
GO:GO:0050839 GO:GO:0007157 GO:GO:0051491 PROSITE:PS51125
GO:GO:0035584 InterPro:IPR011044 SUPFAM:SSF50969 HSSP:P35555
eggNOG:NOG323120 HOGENOM:HOG000231701 HOVERGEN:HBG080306
InterPro:IPR006530 TIGRFAMs:TIGR01643 OrthoDB:EOG4QC14D
InterPro:IPR022385 TIGRFAMs:TIGR03696 CTD:57451 EMBL:AF086607
EMBL:AF086608 EMBL:AF086609 EMBL:AF086610 IPI:IPI00196927
IPI:IPI00207346 IPI:IPI00207350 IPI:IPI00798626 RefSeq:NP_064473.1
UniGene:Rn.229571 ProteinModelPortal:Q9R1K2 PhosphoSite:Q9R1K2
GeneID:117242 KEGG:rno:117242 UCSC:RGD:727907 InParanoid:Q9R1K2
NextBio:620072 ArrayExpress:Q9R1K2 Genevestigator:Q9R1K2
GermOnline:ENSRNOG00000027341 Uniprot:Q9R1K2
Length = 2774
Score = 153 (58.9 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 44/142 (30%), Positives = 60/142 (42%)
Query: 30 NASLCYNKC-IYGYCKGPPDYSCQCELGWTGVDCSVN-C--LCNNHSTCVHGIGICDECH 85
+ +C C +G C G +C+CE GWTG C C C H TC G C EC
Sbjct: 735 SVEVCSVDCGTHGVCIGG---ACRCEEGWTGAACDQRVCHPRCIEHGTCKDGK--C-ECR 788
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ G+HC R + G T +GC CN +G LG + +C+CQ +G C
Sbjct: 789 EGWNGEHCTIGRQTA-GTET--DGCPDL-CNGNGRCTLG---QNSWQCVCQTGWRGPGCN 841
Query: 146 RCLPGYYGDPTDG-GTCYYQCM 166
+ D D G C+
Sbjct: 842 VAMETSCADNKDNEGDGLVDCL 863
Score = 136 (52.9 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIGICDECHDWTTGDHC 93
C G YS CQC GW G +C V C+ C H +C+ G +C + G+HC
Sbjct: 611 CSGNGQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCAAGYK---GEHC 667
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ + C C+SHG VC + GEC+C G NCE
Sbjct: 668 E------------EVDCLDPTCSSHG-----VC--VNGECLCSPGWGGLNCE 700
Score = 101 (40.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 20/57 (35%), Positives = 26/57 (45%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G N CPD+C + T + + C C P GPDC E+C +C HG C
Sbjct: 696 GLNCELARVQCPDQCSGHGTYLPDSGLCNCDPNWMGPDCSVEVCSVDCG---THGVC 749
Score = 82 (33.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C + CI C C TG C + +C C E HGTC
Sbjct: 739 CSVDCGTHGVCIGGACRCEEGWTGAACDQRVCHPRCIE---HGTC 780
Score = 61 (26.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 301 CPDKCPENRTCI---NN-QCVCPPRRTGPDC 327
CPD C N C N+ QCVC GP C
Sbjct: 810 CPDLCNGNGRCTLGQNSWQCVCQTGWRGPGC 840
Score = 55 (24.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDC---------QEEICPNECHEFLNHGTCDL 347
C +C E+ TC + +C C G C + + CP+ C+ +G C L
Sbjct: 770 CHPRCIEHGTCKDGKCECREGWNGEHCTIGRQTAGTETDGCPDLCN---GNGRCTL 822
>UNIPROTKB|P46531 [details] [associations]
symbol:NOTCH1 "Neurogenic locus notch homolog protein 1"
species:9606 "Homo sapiens" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0009912 "auditory receptor cell fate commitment" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0010001 "glial cell
differentiation" evidence=IEA] [GO:0014807 "regulation of
somitogenesis" evidence=IEA] [GO:0021915 "neural tube development"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0031069 "hair
follicle morphogenesis" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032495 "response to muramyl dipeptide"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0042640 "anagen" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045618 "positive regulation of keratinocyte differentiation"
evidence=IEA] [GO:0045955 "negative regulation of calcium
ion-dependent exocytosis" evidence=IEA] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IEA]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IEA] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IEA] [GO:0060768 "regulation of epithelial
cell proliferation involved in prostate gland development"
evidence=IEA] [GO:0070986 "left/right axis specification"
evidence=IEA] [GO:0072017 "distal tubule development" evidence=IEA]
[GO:0072044 "collecting duct development" evidence=IEA] [GO:0072144
"glomerular mesangial cell development" evidence=IEA] [GO:0072602
"interleukin-4 secretion" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001889 "liver development" evidence=IEA] [GO:0002040
"sprouting angiogenesis" evidence=IEA] [GO:0002437 "inflammatory
response to antigenic stimulus" evidence=IEA] [GO:0003162
"atrioventricular node development" evidence=IEA] [GO:0003219
"cardiac right ventricle formation" evidence=IEA] [GO:0003270
"Notch signaling pathway involved in regulation of secondary heart
field cardioblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0007386 "compartment pattern specification" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0007440 "foregut
morphogenesis" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007507 "heart development" evidence=IMP]
[GO:0006955 "immune response" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;TAS] [GO:0007219
"Notch signaling pathway" evidence=IMP;TAS] [GO:0045662 "negative
regulation of myoblast differentiation" evidence=IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=ISS] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=ISS] [GO:0060253
"negative regulation of glial cell proliferation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:2000974 "negative
regulation of pro-B cell differentiation" evidence=ISS] [GO:0030513
"positive regulation of BMP signaling pathway" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP;IDA] [GO:0046427 "positive regulation of JAK-STAT
cascade" evidence=ISS] [GO:2000737 "negative regulation of stem
cell differentiation" evidence=IMP] [GO:0002193 "MAML1-RBP-Jkappa-
ICN1 complex" evidence=IDA] [GO:0097150 "neuronal stem cell
maintenance" evidence=IEP] [GO:0019899 "enzyme binding"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0001047 "core
promoter binding" evidence=ISS] [GO:0043086 "negative regulation of
catalytic activity" evidence=ISS] [GO:0004857 "enzyme inhibitor
activity" evidence=ISS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISS] [GO:0050768 "negative regulation of
neurogenesis" evidence=ISS] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=ISS] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007220 "Notch receptor processing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0003184 "pulmonary valve morphogenesis" evidence=IMP]
[GO:0003192 "mitral valve formation" evidence=IMP] [GO:0060412
"ventricular septum morphogenesis" evidence=IMP] [GO:0061314 "Notch
signaling involved in heart development" evidence=IMP] [GO:0003180
"aortic valve morphogenesis" evidence=IMP] [GO:0003169 "coronary
vein morphogenesis" evidence=ISS] [GO:0003208 "cardiac ventricle
morphogenesis" evidence=ISS] [GO:0060948 "cardiac vascular smooth
muscle cell development" evidence=ISS] [GO:0060982 "coronary artery
morphogenesis" evidence=ISS] [GO:0001837 "epithelial to mesenchymal
transition" evidence=ISS] [GO:0003222 "ventricular trabecula
myocardium morphogenesis" evidence=ISS] [GO:0001190 "RNA polymerase
II transcription factor binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0003273 "cell migration involved in endocardial cushion
formation" evidence=ISS] [GO:0007368 "determination of left/right
symmetry" evidence=ISS] [GO:1901201 "regulation of extracellular
matrix assembly" evidence=ISS] [GO:0030279 "negative regulation of
ossification" evidence=ISS] [GO:0060842 "arterial endothelial cell
differentiation" evidence=ISS] [GO:0003160 "endocardium
morphogenesis" evidence=ISS] [GO:0003209 "cardiac atrium
morphogenesis" evidence=ISS] [GO:0003214 "cardiac left ventricle
morphogenesis" evidence=ISS] [GO:0003344 "pericardium
morphogenesis" evidence=ISS] [GO:0060843 "venous endothelial cell
differentiation" evidence=ISS] [GO:0061384 "heart trabecula
morphogenesis" evidence=ISS] [GO:0003207 "cardiac chamber
formation" evidence=ISS] [GO:0030335 "positive regulation of cell
migration" evidence=ISS] [GO:0060956 "endocardial cell
differentiation" evidence=ISS] [GO:0003157 "endocardium
development" evidence=ISS] [GO:0003181 "atrioventricular valve
morphogenesis" evidence=ISS] [GO:0003198 "epithelial to mesenchymal
transition involved in endocardial cushion formation" evidence=ISS]
[GO:0003203 "endocardial cushion morphogenesis" evidence=ISS]
[GO:0060979 "vasculogenesis involved in coronary vascular
morphogenesis" evidence=ISS] [GO:0010718 "positive regulation of
epithelial to mesenchymal transition" evidence=IMP] [GO:0010812
"negative regulation of cell-substrate adhesion" evidence=IDA]
[GO:0001947 "heart looping" evidence=ISS] [GO:0003213 "cardiac
right atrium morphogenesis" evidence=ISS] [GO:0003241 "growth
involved in heart morphogenesis" evidence=ISS] [GO:0003256
"regulation of transcription from RNA polymerase II promoter
involved in myocardial precursor cell differentiation"
evidence=ISS] [GO:0055008 "cardiac muscle tissue morphogenesis"
evidence=ISS] [GO:0060045 "positive regulation of cardiac muscle
cell proliferation" evidence=ISS] [GO:0060411 "cardiac septum
morphogenesis" evidence=ISS] [GO:0007221 "positive regulation of
transcription of Notch receptor target" evidence=ISS] [GO:0014031
"mesenchymal cell development" evidence=ISS] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=ISS] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=ISS] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IDA] [GO:2000811
"negative regulation of anoikis" evidence=IMP] Reactome:REACT_2001
Reactome:REACT_691 Reactome:REACT_71 InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 Reactome:REACT_111102 GO:GO:0005576
GO:GO:0005654 GO:GO:0000139 GO:GO:0006955
Pathway_Interaction_DB:ps1pathway GO:GO:0005789 GO:GO:0071372
eggNOG:COG0666 GO:GO:0031100 GO:GO:0004857 GO:GO:0001669
GO:GO:0032496 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045665 GO:GO:0005509
GO:GO:0004872 GO:GO:0003700 GO:GO:0007283 GO:GO:0019899
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122 GO:GO:0072144
GO:GO:0030513 GO:GO:0045603 GO:GO:0010718 PROSITE:PS01186
GO:GO:0007220 GO:GO:0042246 GO:GO:0030335 GO:GO:0001047
GO:GO:0001190 GO:GO:0030279 GO:GO:0046427 PROSITE:PS00010
GO:GO:0001947 GO:GO:0006367 GO:GO:0003160 GO:GO:0060979
GO:GO:0010812 GO:GO:0072044 GO:GO:0072017 GO:GO:0048709
GO:GO:0045668 GO:GO:0002052 GO:GO:2000811 GO:GO:0010832
GO:GO:0060045 GO:GO:0003181 GO:GO:0048711 GO:GO:0045662
GO:GO:0048715 GO:GO:0030514 EMBL:AL592301 GO:GO:0032495
GO:GO:0003214 Reactome:REACT_2155 Pfam:PF12661 GO:GO:0060412
GO:GO:0031960 GO:GO:0060982 GO:GO:0021515 GO:GO:0097150
GO:GO:0061314 GO:GO:0003344 GO:GO:0003222 GO:GO:0003180
GO:GO:0003273 GO:GO:0060253 GO:GO:0003198 GO:GO:0003192
SUPFAM:SSF90193 GO:GO:0048708 GO:GO:2000974 GO:GO:2000737
GO:GO:0060842 GO:GO:0003184 GO:GO:0060948 GO:GO:0061419 PDB:2F8X
PDB:3NBN PDB:3V79 PDBsum:2F8X PDBsum:3NBN PDBsum:3V79 GO:GO:0002193
GO:GO:0003241 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 EMBL:AF308602 EMBL:AL354671
EMBL:M73980 EMBL:AB209873 IPI:IPI00412982 PIR:A40043
RefSeq:NP_060087.3 UniGene:Hs.495473 PDB:1PB5 PDB:1TOZ PDB:1YYH
PDB:2F8Y PDB:2HE0 PDB:2VJ3 PDB:3ETO PDB:3I08 PDB:3L95 PDBsum:1PB5
PDBsum:1TOZ PDBsum:1YYH PDBsum:2F8Y PDBsum:2HE0 PDBsum:2VJ3
PDBsum:3ETO PDBsum:3I08 PDBsum:3L95 ProteinModelPortal:P46531
SMR:P46531 DIP:DIP-29919N IntAct:P46531 MINT:MINT-1417018
STRING:P46531 PhosphoSite:P46531 DMDM:206729936 PaxDb:P46531
PRIDE:P46531 Ensembl:ENST00000277541 GeneID:4851 KEGG:hsa:4851
UCSC:uc004chz.3 CTD:4851 GeneCards:GC09M139388 H-InvDB:HIX0008549
HGNC:HGNC:7881 HPA:CAB008112 HPA:CAB022466 MIM:109730 MIM:190198
neXtProt:NX_P46531 Orphanet:1244 PharmGKB:PA31683 OMA:HGGYNCV
OrthoDB:EOG4HX504 EvolutionaryTrace:P46531 GenomeRNAi:4851
NextBio:18684 Bgee:P46531 CleanEx:HS_NOTCH1 Genevestigator:P46531
GermOnline:ENSG00000148400 GO:GO:0003207 GO:GO:0003213
GO:GO:0003169 GO:GO:0060956 GO:GO:0007221 GO:GO:0003264
GO:GO:1901201 GO:GO:0003256 GO:GO:0060843 Uniprot:P46531
Length = 2555
Score = 154 (59.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 42/130 (32%), Positives = 58/130 (44%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
N C++G C+ + Y C C+ GW+G +C +N + CV+G G C D T+G C
Sbjct: 723 NPCVHGACRDSLNGYKCDCDPGWSGTNCDINNNECESNPCVNG-GTCK---DMTSGYVCT 778
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYY 152
CR G + Q +C N N G C D + G +C C G CE L
Sbjct: 779 -CREG-FSGPNCQTNINECASNPCLNQ--GTCIDDVAGYKCNCLLPYTGATCEVVLAPCA 834
Query: 153 GDPT-DGGTC 161
P +GG C
Sbjct: 835 PSPCRNGGEC 844
Score = 141 (54.7 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 49/150 (32%), Positives = 65/150 (43%)
Query: 38 CIYGYCKGPPD-YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHCQY 95
C G C D Y C CE G+TG C++N C + C +G G C+ D G C+
Sbjct: 650 CDSGTCLDKIDGYECACEPGYTGSMCNINIDECAGNP-CHNG-GTCE---DGINGFTCR- 703
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYYG 153
C G Y + T +C+ N V G C DS+ G +C C G NC+
Sbjct: 704 CPEG-YHDPTCLSEVNECNSNP---CVHGACRDSLNGYKCDCDPGWSGTNCDINNNECES 759
Query: 154 DP-TDGGTCY-----YQCMARGMLTGPGPQ 177
+P +GGTC Y C R +GP Q
Sbjct: 760 NPCVNGGTCKDMTSGYVCTCREGFSGPNCQ 789
Score = 140 (54.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 87/332 (26%), Positives = 122/332 (36%)
Query: 38 CIYGY-CKGP-PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
C +G C + C+C G TG+ C +N C ++ C G CD + G
Sbjct: 344 CFHGATCHDRVASFYCECPHGRTGLLCHLNDACISNP-CNEGSN-CDT--NPVNGKAICT 399
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYG 153
C +G G A +Q+ +C ++ G C + G EC C G CE +
Sbjct: 400 CPSGYTGPACSQD-VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVS 458
Query: 154 DPTDG-GTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDS-NS 211
+P TC Q + PG +G+ E N E +P CL G+ LD N
Sbjct: 459 NPCQNDATCLDQIGEFQCICMPGYEGVH---CEVNTDECASSP---CLHN-GRCLDKINE 511
Query: 212 ---TAPADIILLRLQPDIN----VPCNENAVYIYDGLPDFVTSV---G--GTHQSTTLGV 259
P Q D++ PC +N DG P+ T V G GTH +
Sbjct: 512 FQCECPTGFTGHLCQYDVDECASTPC-KNGAKCLDG-PNTYTCVCTEGYTGTHCEVDIDE 569
Query: 260 FCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDK-CPENRTCINNQ--- 315
+ H G K GV T G + I C + C TC +
Sbjct: 570 CDPDPCHYG----SCKDGVATFTCLCRPGYTGHHCETNINECSSQPCRHGGTCQDRDNAY 625
Query: 316 -CVCPPRRTGPDCQEEICPNECHEF-LNHGTC 345
C C TGP+C EI ++C + GTC
Sbjct: 626 LCFCLKGTTGPNC--EINLDDCASSPCDSGTC 655
Score = 135 (52.6 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 47/151 (31%), Positives = 55/151 (36%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KC+ GP Y+C C G+TG C V+ + C +G C D
Sbjct: 537 CKNGAKCL----DGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYG-----SCKDGVATF 587
Query: 92 HCQYCRAGSYGN--ATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERC 147
C CR G G+ T C C HG G C C C T G NCE
Sbjct: 588 TC-LCRPGYTGHHCETNINECSSQPCR-HG----GTCQDRDNAYLCFCLKGTTGPNCEIN 641
Query: 148 LPGYYGDPTDGGTCY-----YQCMARGMLTG 173
L P D GTC Y+C TG
Sbjct: 642 LDDCASSPCDSGTCLDKIDGYECACEPGYTG 672
Score = 134 (52.2 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 45/145 (31%), Positives = 58/145 (40%)
Query: 41 GYCKGPPDY---SCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
G C+ DY SC C GW G C V+ S C HG C H G C +C+
Sbjct: 842 GECRQSEDYESFSCVCPTGWQGQTCEVDINECVLSPCRHGAS-CQNTHG---GYRC-HCQ 896
Query: 98 AGSYG-NATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
AG G N T + CR C++ G+ G+ T C C +G CE + DP
Sbjct: 897 AGYSGRNCETDIDDCRPNPCHNGGSCTDGIN---TAFCDCLPGFRGTFCEEDINECASDP 953
Query: 156 TDGGTCYYQCMARGMLTGP-GPQGL 179
G C+ T P G G+
Sbjct: 954 CRNGANCTDCVDSYTCTCPAGFSGI 978
Score = 121 (47.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 41/141 (29%), Positives = 54/141 (38%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQ 107
Y+C C GWTG DCS N + C HG CHD +C+ C G G
Sbjct: 319 YNCVCVNGWTGEDCSENIDDCASAACFHGA----TCHDRVASFYCE-CPHGRTGLLCHLN 373
Query: 108 EGCRKCDCNSHGNSVLGVCDS--ITGE--CICQDNTQGKNC----ERCLPGYYGDPTD-G 158
+ C CN N CD+ + G+ C C G C + C G +P +
Sbjct: 374 DACISNPCNEGSN-----CDTNPVNGKAICTCPSGYTGPACSQDVDECSLG--ANPCEHA 426
Query: 159 GTCY-----YQCMARGMLTGP 174
G C ++C TGP
Sbjct: 427 GKCINTLGSFECQCLQGYTGP 447
Score = 111 (44.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 42/155 (27%), Positives = 66/155 (42%)
Query: 36 NKCIYGYCKGPP-------DYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGIC-DECHD 86
N+C+ C+ ++ C C G+ GV C VN C + S C+H G C D+ ++
Sbjct: 454 NECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECAS-SPCLHN-GRCLDKINE 511
Query: 87 WTTGDHCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
+ C+ C G G+ + C C + G L ++ T C+C + G +C
Sbjct: 512 F----QCE-CPTGFTGHLCQYDVDECASTPCKN-GAKCLDGPNTYT--CVCTEGYTGTHC 563
Query: 145 E----RCLPG--YYGDPTDGGTCYYQCMARGMLTG 173
E C P +YG DG + C+ R TG
Sbjct: 564 EVDIDECDPDPCHYGSCKDG-VATFTCLCRPGYTG 597
Score = 107 (42.7 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 43/144 (29%), Positives = 59/144 (40%)
Query: 44 KGPPDYSCQCELGWTGVDCSV---N-CLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAG 99
+G DY+C C LG++G C N CL N C +G G CD T C+ C G
Sbjct: 80 RGVADYACSCALGFSGPLCLTPLDNACLTN---PCRNG-GTCDLLT--LTEYKCR-CPPG 132
Query: 100 SYGNATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP--- 155
G + Q + C C + G + I C C + G C + + P
Sbjct: 133 WSGKSCQQADPCASNPCANGGQCLPFEASYI---CHCPPSFHGPTCRQDVNECGQKPGLC 189
Query: 156 TDGGTCY-----YQCMARGMLTGP 174
GGTC+ Y+C+ R TGP
Sbjct: 190 RHGGTCHNEVGSYRCVCRATHTGP 213
Score = 105 (42.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 39/129 (30%), Positives = 53/129 (41%)
Query: 36 NKCIYG-YC-KGPPDYSCQCELGWTGVDCSVN---C-----LCNNHSTC--VHGIGICDE 83
N C G C G Y+C+C WTG C+ + C C N TC HG C
Sbjct: 264 NNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNTHGGYNCVC 323
Query: 84 CHDWTTGDHCQY----CR-AGSYGNATTQEGCRK--CDCNSHGNSVLGVCDSITGECICQ 136
+ WT G+ C C A + AT + C+C HG + L +C + CI
Sbjct: 324 VNGWT-GEDCSENIDDCASAACFHGATCHDRVASFYCEC-PHGRTGL-LCH-LNDACISN 379
Query: 137 DNTQGKNCE 145
+G NC+
Sbjct: 380 PCNEGSNCD 388
Score = 90 (36.7 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 27/77 (35%), Positives = 32/77 (41%)
Query: 291 GFNATYQIFSCP-DKCPENRTCINN----QCVCPPRRTGPDCQEEI--C---PNECHEFL 340
G N I CP + C C++ C CPP TG C E++ C PN C
Sbjct: 251 GQNCEENIDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQ--- 307
Query: 341 NHGTCDLLLTGVHITHG 357
N GTC H THG
Sbjct: 308 NGGTC-------HNTHG 317
Score = 81 (33.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 30/102 (29%), Positives = 44/102 (43%)
Query: 258 GVFCTEDMHRGYEVLEAKSGVMTIH----YKQGKPSEGFNATYQIFSCPD----KCPENR 309
G FC ED++ ++G Y P+ GF+ + + PD C
Sbjct: 939 GTFCEEDINECASD-PCRNGANCTDCVDSYTCTCPA-GFSGIHCENNTPDCTESSCFNGG 996
Query: 310 TCINN----QCVCPPRRTGPDCQEEICPNECHE--FLNHGTC 345
TC++ C+CPP TG CQ ++ NEC L+ GTC
Sbjct: 997 TCVDGINSFTCLCPPGFTGSYCQHDV--NECDSQPCLHGGTC 1036
Score = 80 (33.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 22/64 (34%), Positives = 27/64 (42%)
Query: 291 GFNATYQIFSC-PDKCPENRTC-----INNQCVCPPRRTGPDCQEEI--CP-NECHEFLN 341
G N C P C TC + ++C C P TG +C+E I CP N C N
Sbjct: 212 GPNCERPYVPCSPSPCQNGGTCRPTGDVTHECACLPGFTGQNCEENIDDCPGNNCK---N 268
Query: 342 HGTC 345
G C
Sbjct: 269 GGAC 272
Score = 73 (30.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 29/94 (30%), Positives = 37/94 (39%)
Query: 277 GVMTIHYKQGKPSEGFNATYQIFSC---PDKCPENRTCINNQ----CVCPPRRTGPDCQE 329
GV T + + G T + C P+ C TC N CVC TG DC E
Sbjct: 275 GVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSE 334
Query: 330 EICPNECHEFLN-HG-TCDLLLTGVHIT--HGRT 359
I ++C HG TC + + HGRT
Sbjct: 335 NI--DDCASAACFHGATCHDRVASFYCECPHGRT 366
Score = 70 (29.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 304 KCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC 336
KC N TC++ C CPP G C+ ++ NEC
Sbjct: 1237 KCFNNGTCVDQVGGYSCTCPPGFVGERCEGDV--NEC 1271
Score = 70 (29.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 296 YQIFSCPDKCP---ENRTC-IN-NQCVCPPRRTGPDCQEEICPNECH 337
Y+ FSC CP + +TC ++ N+CV P R G CQ CH
Sbjct: 850 YESFSCV--CPTGWQGQTCEVDINECVLSPCRHGASCQNTHGGYRCH 894
Score = 65 (27.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 291 GFNATY---QIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNH 342
GF +Y + C + C TC + +C CP TGP+CQ + + N
Sbjct: 1012 GFTGSYCQHDVNECDSQPCLHGGTCQDGCGSYRCTCPQGYTGPNCQNLVHWCDSSPCKNG 1071
Query: 343 GTC 345
G C
Sbjct: 1072 GKC 1074
Score = 64 (27.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 21/67 (31%), Positives = 28/67 (41%)
Query: 290 EGFNATYQIFSCPD-KCPENRTCINNQ----CVCPPRRTGPDCQ---EEIC--PNECHEF 339
EG +C +C TCI+ C+C TGP+CQ C N C+
Sbjct: 1341 EGATCENDARTCGSLRCLNGGTCISGPRSPTCLCLGPFTGPECQFPASSPCLGGNPCY-- 1398
Query: 340 LNHGTCD 346
N GTC+
Sbjct: 1399 -NQGTCE 1404
Score = 63 (27.2 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 27/90 (30%), Positives = 36/90 (40%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEF--LNH 342
EG + C C N C++ QC CP TG CQ ++ +EC N
Sbjct: 483 EGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQYDV--DECASTPCKNG 540
Query: 343 GTC-DLLLTGVHI-THGRT-LHYQVDLIRC 369
C D T + T G T H +VD+ C
Sbjct: 541 AKCLDGPNTYTCVCTEGYTGTHCEVDIDEC 570
Score = 62 (26.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 290 EGFNATYQIFSCP-DKCPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNECHEFLN 341
+G I C C +C N +C C +G +C+ +I C PN CH N
Sbjct: 862 QGQTCEVDINECVLSPCRHGASCQNTHGGYRCHCQAGYSGRNCETDIDDCRPNPCH---N 918
Query: 342 HGTC 345
G+C
Sbjct: 919 GGSC 922
Score = 61 (26.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 22/67 (32%), Positives = 25/67 (37%)
Query: 291 GFNATYQIFSCP-DKCPENRTC---INN-QCVCPPRRTGPDCQEEICPNECHEF-LNHGT 344
G I C + C TC IN C CP P C E+ NEC+ HG
Sbjct: 672 GSMCNINIDECAGNPCHNGGTCEDGINGFTCRCPEGYHDPTCLSEV--NECNSNPCVHGA 729
Query: 345 CDLLLTG 351
C L G
Sbjct: 730 CRDSLNG 736
Score = 60 (26.2 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 309 RTCINN-QCVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
R +N +C C P +G +C +I NEC +N GTC + +G
Sbjct: 731 RDSLNGYKCDCDPGWSGTNC--DINNNECESNPCVNGGTCKDMTSG 774
Score = 53 (23.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQEEICPNEC 336
+C ++ + CVCP G C+ +I NEC
Sbjct: 843 ECRQSEDYESFSCVCPTGWQGQTCEVDI--NEC 873
Score = 52 (23.4 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 19/64 (29%), Positives = 24/64 (37%)
Query: 290 EGF---NATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLN 341
EGF N I C C TCI++ +C C TG C+ + P N
Sbjct: 781 EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEVVLAPCAPSPCRN 840
Query: 342 HGTC 345
G C
Sbjct: 841 GGEC 844
Score = 46 (21.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 15/54 (27%), Positives = 21/54 (38%)
Query: 305 CPENRTCIN----NQCVCPPRRTGPDCQE---EICPNECHEFLNHGTCDLLLTG 351
C C++ + C C TG C++ E P+ C N TC L G
Sbjct: 1116 CQHGGLCVDAGNTHHCRCQAGYTGSYCEDLVDECSPSPCQ---NGATCTDYLGG 1166
Score = 46 (21.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 17/56 (30%), Positives = 20/56 (35%)
Query: 298 IFSCPDK-CPENRTCI--NNQ-----CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
I C K C TC +N C CP G C+ + LN GTC
Sbjct: 1308 INGCKGKPCKNGGTCAVASNTARGFICKCPAGFEGATCENDARTCGSLRCLNGGTC 1363
Score = 41 (19.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 312 INN-QCVCPPRRTGPDCQEEICPNECH--EFLNHGTC 345
+N+ C C TG C+ I N C N GTC
Sbjct: 1288 VNDFHCECRAGHTGRRCESVI--NGCKGKPCKNGGTC 1322
Score = 37 (18.1 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 325 PDCQEEICPNECHEFLNHGTC 345
P+CQE+ C N+ C
Sbjct: 1452 PECQEDAGNKVCSLQCNNHAC 1472
>MGI|MGI:97363 [details] [associations]
symbol:Notch1 "notch 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0001047 "core
promoter binding" evidence=IDA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IDA] [GO:0001669
"acrosomal vesicle" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0001947 "heart looping" evidence=IGI] [GO:0002040 "sprouting
angiogenesis" evidence=IMP] [GO:0002051 "osteoblast fate
commitment" evidence=NAS] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=ISO] [GO:0002193
"MAML1-RBP-Jkappa- ICN1 complex" evidence=ISO] [GO:0002437
"inflammatory response to antigenic stimulus" evidence=IGI]
[GO:0003157 "endocardium development" evidence=IMP] [GO:0003160
"endocardium morphogenesis" evidence=IMP] [GO:0003162
"atrioventricular node development" evidence=IMP] [GO:0003169
"coronary vein morphogenesis" evidence=IMP] [GO:0003180 "aortic
valve morphogenesis" evidence=ISO] [GO:0003181 "atrioventricular
valve morphogenesis" evidence=IMP] [GO:0003184 "pulmonary valve
morphogenesis" evidence=ISO] [GO:0003192 "mitral valve formation"
evidence=ISO] [GO:0003198 "epithelial to mesenchymal transition
involved in endocardial cushion formation" evidence=IMP]
[GO:0003203 "endocardial cushion morphogenesis" evidence=IMP]
[GO:0003207 "cardiac chamber formation" evidence=IMP] [GO:0003208
"cardiac ventricle morphogenesis" evidence=IMP] [GO:0003209
"cardiac atrium morphogenesis" evidence=IMP] [GO:0003213 "cardiac
right atrium morphogenesis" evidence=IMP] [GO:0003214 "cardiac left
ventricle morphogenesis" evidence=IMP] [GO:0003219 "cardiac right
ventricle formation" evidence=IMP] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IMP] [GO:0003241
"growth involved in heart morphogenesis" evidence=IMP] [GO:0003256
"regulation of transcription from RNA polymerase II promoter
involved in myocardial precursor cell differentiation"
evidence=IMP] [GO:0003264 "regulation of cardioblast proliferation"
evidence=ISO] [GO:0003270 "Notch signaling pathway involved in
regulation of secondary heart field cardioblast proliferation"
evidence=IMP] [GO:0003273 "cell migration involved in endocardial
cushion formation" evidence=IMP] [GO:0003344 "pericardium
morphogenesis" evidence=IMP] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0004857 "enzyme
inhibitor activity" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IMP;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO;IDA] [GO:0005887 "integral to plasma
membrane" evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006959 "humoral immune response" evidence=IGI] [GO:0007219
"Notch signaling pathway" evidence=ISO;IC;IDA;IMP] [GO:0007221
"positive regulation of transcription of Notch receptor target"
evidence=ISO;IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0007386 "compartment pattern specification"
evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007440 "foregut morphogenesis" evidence=IMP] [GO:0007492
"endoderm development" evidence=IMP] [GO:0007507 "heart
development" evidence=ISO;IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISO;IGI] [GO:0008544 "epidermis
development" evidence=IGI] [GO:0009790 "embryo development"
evidence=ISO] [GO:0009912 "auditory receptor cell fate commitment"
evidence=IMP] [GO:0009986 "cell surface" evidence=IDA] [GO:0010001
"glial cell differentiation" evidence=IMP] [GO:0010468 "regulation
of gene expression" evidence=IMP] [GO:0010718 "positive regulation
of epithelial to mesenchymal transition" evidence=ISO;IMP]
[GO:0010812 "negative regulation of cell-substrate adhesion"
evidence=ISO] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IDA] [GO:0014031 "mesenchymal cell
development" evidence=IMP] [GO:0014807 "regulation of
somitogenesis" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0021915 "neural tube
development" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0030216 "keratinocyte differentiation" evidence=IMP]
[GO:0030279 "negative regulation of ossification" evidence=IMP]
[GO:0030324 "lung development" evidence=IMP] [GO:0030326 "embryonic
limb morphogenesis" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP] [GO:0030335 "positive regulation of cell
migration" evidence=IMP] [GO:0030513 "positive regulation of BMP
signaling pathway" evidence=IDA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IGI;IMP] [GO:0031069 "hair follicle
morphogenesis" evidence=IMP] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0032495 "response to muramyl dipeptide"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=ISO] [GO:0042640 "anagen" evidence=IMP] [GO:0043065
"positive regulation of apoptotic process" evidence=IGI;IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0043086 "negative regulation of catalytic
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IMP]
[GO:0045596 "negative regulation of cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=ISO] [GO:0045618 "positive regulation of
keratinocyte differentiation" evidence=IGI;IDA] [GO:0045662
"negative regulation of myoblast differentiation" evidence=ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=ISO;IGI;IMP] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0045687 "positive
regulation of glial cell differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0045955 "negative regulation of
calcium ion-dependent exocytosis" evidence=IMP] [GO:0046427
"positive regulation of JAK-STAT cascade" evidence=IDA] [GO:0046533
"negative regulation of photoreceptor cell differentiation"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IGI;IDA]
[GO:0048663 "neuron fate commitment" evidence=IGI] [GO:0048708
"astrocyte differentiation" evidence=ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IDA] [GO:0048715
"negative regulation of oligodendrocyte differentiation"
evidence=IDA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0050678 "regulation of epithelial cell
proliferation" evidence=IMP] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IGI] [GO:0050767
"regulation of neurogenesis" evidence=IMP] [GO:0050768 "negative
regulation of neurogenesis" evidence=IDA] [GO:0050793 "regulation
of developmental process" evidence=IEA] [GO:0055008 "cardiac muscle
tissue morphogenesis" evidence=IMP] [GO:0060038 "cardiac muscle
cell proliferation" evidence=IMP] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IMP] [GO:0060253
"negative regulation of glial cell proliferation" evidence=IDA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IMP] [GO:0060411 "cardiac septum morphogenesis"
evidence=IMP] [GO:0060412 "ventricular septum morphogenesis"
evidence=ISO] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IMP] [GO:0060548 "negative regulation of cell
death" evidence=IMP] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IMP] [GO:0060768 "regulation of epithelial
cell proliferation involved in prostate gland development"
evidence=IMP] [GO:0060842 "arterial endothelial cell
differentiation" evidence=IMP] [GO:0060843 "venous endothelial cell
differentiation" evidence=IMP] [GO:0060948 "cardiac vascular smooth
muscle cell development" evidence=IMP] [GO:0060956 "endocardial
cell differentiation" evidence=IMP] [GO:0060979 "vasculogenesis
involved in coronary vascular morphogenesis" evidence=IMP]
[GO:0060982 "coronary artery morphogenesis" evidence=IMP]
[GO:0061314 "Notch signaling involved in heart development"
evidence=IGI;ISO;IMP] [GO:0061344 "regulation of cell adhesion
involved in heart morphogenesis" evidence=IC] [GO:0061384 "heart
trabecula morphogenesis" evidence=IMP] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IDA] [GO:0070986 "left/right axis
specification" evidence=IGI] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=ISO] [GO:0072602
"interleukin-4 secretion" evidence=IGI] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IMP] [GO:1901189 "positive regulation of ephrin receptor
signaling pathway" evidence=IC] [GO:1901201 "regulation of
extracellular matrix assembly" evidence=IMP] [GO:2000737 "negative
regulation of stem cell differentiation" evidence=ISO] [GO:2000811
"negative regulation of anoikis" evidence=ISO] [GO:2000974
"negative regulation of pro-B cell differentiation" evidence=IMP]
Reactome:REACT_99130 Reactome:REACT_81380 InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
MGI:MGI:97363 GO:GO:0005829 GO:GO:0001708 GO:GO:0043066
GO:GO:0005576 GO:GO:0030216 GO:GO:0005654 GO:GO:0009986
GO:GO:0000139 GO:GO:0005887 GO:GO:0002437 GO:GO:0005789
GO:GO:0030324 eggNOG:COG0666 GO:GO:0031100 GO:GO:0004857
GO:GO:0043565 GO:GO:0001669 GO:GO:0032496 GO:GO:0001701
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0030900 GO:GO:0005509 GO:GO:0004872
GO:GO:0001889 GO:GO:0003700 GO:GO:0007283 Reactome:REACT_115202
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122 GO:GO:0043065
GO:GO:0072144 GO:GO:0007409 GO:GO:0030513 GO:GO:0045603
GO:GO:0010718 PROSITE:PS01186 GO:GO:0042246 GO:GO:0045955
GO:GO:0030335 GO:GO:0001047 GO:GO:0001190 GO:GO:0030279
GO:GO:0090090 EMBL:CH466542 GO:GO:0035116 GO:GO:0046427
PROSITE:PS00010 GO:GO:0001947 GO:GO:0070986 GO:GO:0006959
GO:GO:0042640 GO:GO:0021915 GO:GO:0060740 GO:GO:0002040
GO:GO:0003160 GO:GO:0007492 GO:GO:0060979 GO:GO:0010812
GO:GO:0035914 GO:GO:0072044 GO:GO:0072017 GO:GO:0031490
GO:GO:0048709 GO:GO:0045668 GO:GO:0002052 GO:GO:0031069
GO:GO:2000811 GO:GO:0048754 GO:GO:0050679 GO:GO:0010001
GO:GO:0010832 GO:GO:0048103 GO:GO:0060038 GO:GO:0060045
GO:GO:0003181 GO:GO:0048711 GO:GO:0045662 GO:GO:0048715
GO:GO:0030514 GO:GO:0032495 GO:GO:0003214 Pfam:PF12661
MEROPS:I63.002 GO:GO:0060411 GO:GO:0046533 GO:GO:0031960
GO:GO:0045618 GeneTree:ENSGT00700000104305 GO:GO:0060982
GO:GO:0021515 GO:GO:0007440 GO:GO:0007386 GO:GO:0097150
GO:GO:0009912 GO:GO:0003344 GO:GO:0003222 EMBL:AL732541
GO:GO:0003180 GO:GO:0003273 GO:GO:0060253 GO:GO:0003198
GO:GO:0060528 GO:GO:0072602 SUPFAM:SSF90193 GO:GO:0003219
GO:GO:0048708 GO:GO:2000974 GO:GO:2000737 GO:GO:0060842
GO:GO:0060948 GO:GO:0061419 PDB:3P3N PDB:3P3P PDBsum:3P3N
PDBsum:3P3P GO:GO:0002193 GO:GO:0002051 GO:GO:0003241
HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4851 OMA:HGGYNCV
OrthoDB:EOG4HX504 GO:GO:0003213 GO:GO:0003169 GO:GO:0060956
GO:GO:0007221 GO:GO:1901201 GO:GO:0003256 GO:GO:0060843 EMBL:Z11886
EMBL:AF508809 EMBL:AB100603 EMBL:BC138441 EMBL:BC138442 EMBL:L02613
EMBL:X68278 EMBL:AK154528 EMBL:AK157475 EMBL:AJ238029 EMBL:X82562
IPI:IPI00127186 IPI:IPI00322561 IPI:IPI00974755 IPI:IPI00986769
PIR:A46438 PIR:B49175 RefSeq:NP_032740.3 UniGene:Mm.290610 PDB:1YMP
PDB:2QC9 PDB:2RQZ PDB:2RR0 PDB:2RR2 PDBsum:1YMP PDBsum:2QC9
PDBsum:2RQZ PDBsum:2RR0 PDBsum:2RR2 ProteinModelPortal:Q01705
SMR:Q01705 DIP:DIP-214N IntAct:Q01705 MINT:MINT-142586
STRING:Q01705 PhosphoSite:Q01705 PaxDb:Q01705 PRIDE:Q01705
Ensembl:ENSMUST00000028288 GeneID:18128 KEGG:mmu:18128
InParanoid:Q01705 EvolutionaryTrace:Q01705 NextBio:293356
Bgee:Q01705 CleanEx:MM_NOTCH1 Genevestigator:Q01705
GermOnline:ENSMUSG00000026923 GO:GO:0003162 GO:GO:0003270
GO:GO:1901189 GO:GO:0061344 GO:GO:0060768 GO:GO:0014807
Uniprot:Q01705
Length = 2531
Score = 152 (58.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 43/130 (33%), Positives = 56/130 (43%)
Query: 36 NKCIYGYCK-GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
N CI+G C+ G Y C C GW+G +C +N + CV+G G C D T+G C
Sbjct: 723 NPCIHGACRDGLNGYKCDCAPGWSGTNCDINNNECESNPCVNG-GTCK---DMTSGYVCT 778
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYY 152
CR G + Q +C N N G C D + G +C C G CE L
Sbjct: 779 -CREG-FSGPNCQTNINECASNPCLNQ--GTCIDDVAGYKCNCPLPYTGATCEVVLAPCA 834
Query: 153 GDPT-DGGTC 161
P + G C
Sbjct: 835 TSPCKNSGVC 844
Score = 141 (54.7 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 50/164 (30%), Positives = 62/164 (37%)
Query: 29 FNASLC-YN--KCIYGYCK-------GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGI 78
FN LC Y+ +C CK GP Y+C C G+TG C V+ + C +G
Sbjct: 520 FNGHLCQYDVDECASTPCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYG- 578
Query: 79 GICDECHDWTTGDHCQYCRAGSYGN--ATTQEGCRKCDCNSHGNSVLGVCDSITGE--CI 134
C D C C+ G G+ T C C HG G C C+
Sbjct: 579 ----SCKDGVATFTC-LCQPGYTGHHCETNINECHSQPCR-HG----GTCQDRDNSYLCL 628
Query: 135 CQDNTQGKNCERCLPGYYGDPTDGGTCY-----YQCMARGMLTG 173
C T G NCE L +P D GTC Y+C TG
Sbjct: 629 CLKGTTGPNCEINLDDCASNPCDSGTCLDKIDGYECACEPGYTG 672
Score = 141 (54.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 88/348 (25%), Positives = 122/348 (35%)
Query: 30 NASLCYNK-CIY-GYCKGP-PDYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGI 80
N C + C++ G+C ++ CQC G+ G C + C C N + C+ G
Sbjct: 490 NTDECASSPCLHNGHCMDKINEFQCQCPKGFNGHLCQYDVDECASTPCKNGAKCLDGPNT 549
Query: 81 --CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDN 138
C C + TG HC+ + C C+ +G+ GV T C+CQ
Sbjct: 550 YTC-VCTEGYTGTHCE----------VDIDECDPDPCH-YGSCKDGVA---TFTCLCQPG 594
Query: 139 TQGKNCERCLPGYYGDPT-DGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGK 192
G +CE + + P GGTC Y C+ TGP E N +
Sbjct: 595 YTGHHCETNINECHSQPCRHGGTCQDRDNSYLCLCLKGTTGPN--------CEINLDDCA 646
Query: 193 DTP--SRECL-WIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVG 249
P S CL I G + + + PC+ N DG+ F
Sbjct: 647 SNPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAGSPCH-NGGTCEDGIAGFTCRCP 705
Query: 250 -GTHQSTTLGVF--CTEDMHRGYEVLEAKSGVMTIHYK-QGKPS-EGFNATYQIFSCPDK 304
G H T L C + + +G YK P G N C
Sbjct: 706 EGYHDPTCLSEVNECNSNPCIHGACRDGLNG-----YKCDCAPGWSGTNCDINNNECESN 760
Query: 305 -CPENRTCINNQ----CVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
C TC + C C +GP+CQ I NEC + LN GTC
Sbjct: 761 PCVNGGTCKDMTSGYVCTCREGFSGPNCQTNI--NECASNPCLNQGTC 806
Score = 139 (54.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 93/374 (24%), Positives = 142/374 (37%)
Query: 36 NKCIYG-YC-KGPPDYSCQCELGWTGVDCSVN---C-----LCNNHSTC--VHGIGICDE 83
N C G C G Y+C+C WTG C+ + C C N TC HG C
Sbjct: 264 NNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNTHGGYNCVC 323
Query: 84 CHDWTTGDHCQY----CR-AGSYGNATTQEGCRK--CDCNSHGNSVLGVCDSITGECICQ 136
+ WT G+ C C A + AT + C+C HG + L +C + CI
Sbjct: 324 VNGWT-GEDCSENIDDCASAACFQGATCHDRVASFYCEC-PHGRTGL-LCH-LNDACISN 379
Query: 137 DNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPG-PQGLGSGLAERNAWEGKDTP 195
+G NC+ +P +G C TGP Q + N E
Sbjct: 380 PCNEGSNCDT-------NPVNGKAI---CTCPSGYTGPACSQDVDECALGANPCEH---- 425
Query: 196 SRECLWIIG----QSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
+ +CL +G Q L + +I + I+ PC +A + D + +F
Sbjct: 426 AGKCLNTLGSFECQCLQGYTGPRCEI---DVNECISNPCQNDATCL-DQIGEFQCICMPG 481
Query: 252 HQSTTLGVFC--TEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNA---TYQIFSCPDK-C 305
++ GV+C D L + I+ Q + +GFN Y + C C
Sbjct: 482 YE----GVYCEINTDECASSPCLHNGHCMDKINEFQCQCPKGFNGHLCQYDVDECASTPC 537
Query: 306 PENRTCINNQ----CVCPPRRTGPDCQEEI--C-PNECHEFLNHGTC-DLLLTGVHITH- 356
C++ CVC TG C+ +I C P+ CH +G+C D + T +
Sbjct: 538 KNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCH----YGSCKDGVATFTCLCQP 593
Query: 357 GRTLHY-QVDLIRC 369
G T H+ + ++ C
Sbjct: 594 GYTGHHCETNINEC 607
Score = 133 (51.9 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 50/165 (30%), Positives = 65/165 (39%)
Query: 21 CTVLLLYIFNASLCYNKCIYGYCKGPPDY---SCQCELGWTGVDCSVNCLCNNHSTCVHG 77
C V+L S C N G CK DY SC C GW G C V+ S C HG
Sbjct: 826 CEVVLAPCAT-SPCKNS---GVCKESEDYESFSCVCPTGWQGQTCEVDINECVKSPCRHG 881
Query: 78 IGICDECHDWTTGDHCQYCRAGSYG-NATTQ-EGCRKCDCNSHGNSVLGVCDSITGECIC 135
C + T G + C+AG G N + + CR C++ G+ G+ T C C
Sbjct: 882 AS----CQN-TNGSYRCLCQAGYTGRNCESDIDDCRPNPCHNGGSCTDGIN---TAFCDC 933
Query: 136 QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGP-GPQGL 179
QG CE + +P G C+ T P G G+
Sbjct: 934 LPGFQGAFCEEDINECASNPCQNGANCTDCVDSYTCTCPVGFNGI 978
Score = 132 (51.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 79/304 (25%), Positives = 106/304 (34%)
Query: 49 YSCQCELGWTGVDC---SVNCLCNNHST-------CVHGIGIC-DECHDWTTGD-HCQYC 96
Y C+C GWTGV+C SV+C C HG G+C DE GD H +C
Sbjct: 1081 YHCECRSGWTGVNCDVLSVSCEVAAQKRGIDVTLLCQHG-GLCVDE------GDKHYCHC 1133
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGD 154
+AG Y + ++ +C N N C G C C G NC +
Sbjct: 1134 QAG-YTGSYCEDEVDECSPNPCQNGA--TCTDYLGGFSCKCVAGYHGSNCSEEINECLSQ 1190
Query: 155 PT-DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSR--ECL---WIIGQSLD 208
P +GGTC + G QG+ + + D SR +C + Q
Sbjct: 1191 PCQNGGTCIDLTNSYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGG 1250
Query: 209 SNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRG 268
T P + R + D+N C N G + V V H G H G
Sbjct: 1251 YTCTCPPGFVGERCEGDVN-ECLSNPCDPR-GTQNCVQRVNDFHCECRAG-------HTG 1301
Query: 269 YEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCP---ENRTCINNQCVCPPRR--T 323
+G K G + T + F C +CP E TC N+ C R
Sbjct: 1302 RRCESVINGCRGKPCKNGGVCAVASNTARGFIC--RCPAGFEGATCENDARTCGSLRCLN 1359
Query: 324 GPDC 327
G C
Sbjct: 1360 GGTC 1363
Score = 131 (51.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 77/317 (24%), Positives = 115/317 (36%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+ C+C G TG+ C +N C ++ C G CD + G C +G G A +Q+
Sbjct: 357 FYCECPHGRTGLLCHLNDACISNP-CNEGSN-CDT--NPVNGKAICTCPSGYTGPACSQD 412
Query: 109 GCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQC 165
+C ++ G C + G EC C G CE + +P TC Q
Sbjct: 413 -VDECALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQI 471
Query: 166 MARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPD 225
+ PG +G+ E N E +P + + + P Q D
Sbjct: 472 GEFQCICMPGYEGV---YCEINTDECASSPCLHNGHCMDKINEFQCQCPKGFNGHLCQYD 528
Query: 226 IN----VPCNENAVYIYDGLPDFVTSV---G--GTHQSTTLGVFCTEDMHRGYEVLEAKS 276
++ PC +N DG P+ T V G GTH + + H G K
Sbjct: 529 VDECASTPC-KNGAKCLDG-PNTYTCVCTEGYTGTHCEVDIDECDPDPCHYG----SCKD 582
Query: 277 GVMTIHYKQGKPSEGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQ--- 328
GV T G + I C + C TC + C+C TGP+C+
Sbjct: 583 GVATFTCLCQPGYTGHHCETNINECHSQPCRHGGTCQDRDNSYLCLCLKGTTGPNCEINL 642
Query: 329 EEICPNECHEFLNHGTC 345
++ N C + GTC
Sbjct: 643 DDCASNPC----DSGTC 655
Score = 125 (49.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 51/156 (32%), Positives = 61/156 (39%)
Query: 36 NKCIYGY-CKGPPD-YSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIG--ICDECH 85
N C G C D Y+C C +G+ G+ C N C C N TCV GI C C
Sbjct: 952 NPCQNGANCTDCVDSYTCTCPVGFNGIHCENNTPDCTESSCFNGGTCVDGINSFTC-LCP 1010
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKN 143
TG +CQY E C C HG G C DS T +C C G N
Sbjct: 1011 PGFTGSYCQY---------DVNE-CDSRPC-LHG----GTCQDSYGTYKCTCPQGYTGLN 1055
Query: 144 CERCLPGYYGDPT-DGGTCY-----YQCMARGMLTG 173
C+ + P +GG C+ Y C R TG
Sbjct: 1056 CQNLVRWCDSAPCKNGGRCWQTNTQYHCECRSGWTG 1091
Score = 108 (43.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 44/143 (30%), Positives = 58/143 (40%)
Query: 45 GPPDYSCQCELGWTGVDCSV---N-CLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
G DY+C C LG++G C N CL N C +G G CD T C+ C G
Sbjct: 81 GTVDYACSCPLGFSGPLCLTPLDNACLAN---PCRNG-GTCDLLT--LTEYKCR-CPPGW 133
Query: 101 YGNATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP---T 156
G + Q + C C ++G L S C C G C + + +P
Sbjct: 134 SGKSCQQADPCASNPC-ANGGQCLPFESSYI--CRCPPGFHGPTCRQDVNECSQNPGLCR 190
Query: 157 DGGTCY-----YQCMARGMLTGP 174
GGTC+ Y+C R TGP
Sbjct: 191 HGGTCHNEIGSYRCACRATHTGP 213
Score = 108 (43.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 44/154 (28%), Positives = 65/154 (42%)
Query: 29 FNASLCY----NKCIYGYCK--GPPD------YSCQCELGWTGVDCSVNCLCNNHSTCVH 76
F+ LC N C+ C+ G D Y C+C GW+G C C ++ C +
Sbjct: 93 FSGPLCLTPLDNACLANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADPCASNP-CAN 151
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNS----HGNSVLGVCDSITGE 132
G G +C + + C+ C G +G T ++ +C N HG G C + G
Sbjct: 152 G-G---QCLPFESSYICR-CPPGFHG-PTCRQDVNECSQNPGLCRHG----GTCHNEIGS 201
Query: 133 --CICQDNTQGKNCERCLPGYYGDPT---DGGTC 161
C C+ G +CE LP P+ +GGTC
Sbjct: 202 YRCACRATHTGPHCE--LPYVPCSPSPCQNGGTC 233
Score = 100 (40.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 39/133 (29%), Positives = 49/133 (36%)
Query: 36 NKCIYG-YCKG-PPDYSCQCELGWTGVDC--SVNCLCNNHSTCVHGIGICDECHDWTTGD 91
N C G C Y C+C G+ G C VN N C HG CH+
Sbjct: 147 NPCANGGQCLPFESSYICRCPPGFHGPTCRQDVNECSQNPGLCRHG----GTCHNEIGSY 202
Query: 92 HCQYCRAGSYGN--ATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
C CRA G C C + G + D+ T EC C G+NCE +
Sbjct: 203 RCA-CRATHTGPHCELPYVPCSPSPCQN-GGTCRPTGDT-THECACLPGFAGQNCEENVD 259
Query: 150 GYYGDPT-DGGTC 161
G+ +GG C
Sbjct: 260 DCPGNNCKNGGAC 272
Score = 89 (36.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 26/77 (33%), Positives = 32/77 (41%)
Query: 291 GFNATYQIFSCP-DKCPENRTCINN----QCVCPPRRTGPDCQEEI--C---PNECHEFL 340
G N + CP + C C++ C CPP TG C E++ C PN C
Sbjct: 251 GQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQ--- 307
Query: 341 NHGTCDLLLTGVHITHG 357
N GTC H THG
Sbjct: 308 NGGTC-------HNTHG 317
Score = 83 (34.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 291 GFNATYQIFSCPD----KCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHE--FL 340
GFN + + PD C TC++ C+CPP TG CQ ++ NEC L
Sbjct: 974 GFNGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQYDV--NECDSRPCL 1031
Query: 341 NHGTC 345
+ GTC
Sbjct: 1032 HGGTC 1036
Score = 72 (30.4 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 20/64 (31%), Positives = 28/64 (43%)
Query: 290 EGFNATYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNECHEFLN 341
+G I C C +C N +C+C TG +C+ +I C PN CH N
Sbjct: 862 QGQTCEVDINECVKSPCRHGASCQNTNGSYRCLCQAGYTGRNCESDIDDCRPNPCH---N 918
Query: 342 HGTC 345
G+C
Sbjct: 919 GGSC 922
Score = 71 (30.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 23/68 (33%), Positives = 30/68 (44%)
Query: 291 GFNATY---QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFL 340
G+ +Y ++ C P+ C TC + C C G +C EEI NEC
Sbjct: 1136 GYTGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEI--NECLSQPCQ 1193
Query: 341 NHGTC-DL 347
N GTC DL
Sbjct: 1194 NGGTCIDL 1201
Score = 69 (29.3 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 304 KCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC 336
KC N TC++ C CPP G C+ ++ NEC
Sbjct: 1237 KCFNNGTCVDQVGGYTCTCPPGFVGERCEGDV--NEC 1271
Score = 69 (29.3 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 302 PDKCPENRTC-----INNQCVCPPRRTGPDCQEEI--CP-NECHEFLNHGTC 345
P C TC ++C C P G +C+E + CP N C N G C
Sbjct: 224 PSPCQNGGTCRPTGDTTHECACLPGFAGQNCEENVDDCPGNNCK---NGGAC 272
Score = 66 (28.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 21/67 (31%), Positives = 28/67 (41%)
Query: 290 EGFNATYQIFSCPD-KCPENRTCINNQ----CVCPPRRTGPDCQ---EEIC--PNECHEF 339
EG +C +C TCI+ C+C TGP+CQ C N C+
Sbjct: 1341 EGATCENDARTCGSLRCLNGGTCISGPRSPTCLCLGSFTGPECQFPASSPCVGSNPCY-- 1398
Query: 340 LNHGTCD 346
N GTC+
Sbjct: 1399 -NQGTCE 1404
Score = 66 (28.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 20/64 (31%), Positives = 25/64 (39%)
Query: 290 EGF---NATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLN 341
EGF N I C C TCI++ +C CP TG C+ + P N
Sbjct: 781 EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCATSPCKN 840
Query: 342 HGTC 345
G C
Sbjct: 841 SGVC 844
Score = 62 (26.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 19/51 (37%), Positives = 23/51 (45%)
Query: 291 GFNATYQIFSC-PDKCPENRTC---INNQ-CVCPPRRTGPDCQEEICPNEC 336
G N I C P+ C +C IN C C P G C+E+I NEC
Sbjct: 901 GRNCESDIDDCRPNPCHNGGSCTDGINTAFCDCLPGFQGAFCEEDI--NEC 949
Score = 58 (25.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
+C C P +G +C +I NEC +N GTC + +G
Sbjct: 738 KCDCAPGWSGTNC--DINNNECESNPCVNGGTCKDMTSG 774
Score = 57 (25.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNECHEF-LNHG-TC 345
C E+ + CVCP G C+ +I NEC + HG +C
Sbjct: 844 CKESEDYESFSCVCPTGWQGQTCEVDI--NECVKSPCRHGASC 884
Score = 57 (25.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 17/54 (31%), Positives = 23/54 (42%)
Query: 305 CPENRTCIN----NQCVCPPRRTGPDCQEEI--C-PNECHEFLNHGTCDLLLTG 351
C C++ + C C TG C++E+ C PN C N TC L G
Sbjct: 1116 CQHGGLCVDEGDKHYCHCQAGYTGSYCEDEVDECSPNPCQ---NGATCTDYLGG 1166
Score = 57 (25.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 291 GFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
G Y + C + C TC ++ +C CP TG +CQ + + N G C
Sbjct: 1015 GSYCQYDVNECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSAPCKNGGRC 1074
Score = 44 (20.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C CP G C+ + LN GTC
Sbjct: 1334 CRCPAGFEGATCENDARTCGSLRCLNGGTC 1363
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 314 NQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVH 353
N+C P + G +C + + C TC + G+H
Sbjct: 947 NECASNPCQNGANCTDCVDSYTC-------TCPVGFNGIH 979
>RGD|3188 [details] [associations]
symbol:Notch2 "notch 2" species:10116 "Rattus norvegicus"
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0001709 "cell fate determination" evidence=IDA] [GO:0001890
"placenta development" evidence=ISO] [GO:0001947 "heart looping"
evidence=ISO] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA;ISO] [GO:0003184 "pulmonary valve
morphogenesis" evidence=IEA;ISO] [GO:0004872 "receptor activity"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005887 "integral to
plasma membrane" evidence=IEA;ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA;ISO] [GO:0007050 "cell cycle arrest"
evidence=IEA;ISO;ISS] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO;ISS] [GO:0009887 "organ
morphogenesis" evidence=ISO;ISS] [GO:0009986 "cell surface"
evidence=IEA;ISO;ISS;TAS] [GO:0016049 "cell growth"
evidence=IEA;ISO;ISS] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA;ISO] [GO:0042060 "wound
healing" evidence=ISO] [GO:0042246 "tissue regeneration"
evidence=IEP] [GO:0043065 "positive regulation of apoptotic process"
evidence=IEA;ISO] [GO:0045672 "positive regulation of osteoclast
differentiation" evidence=ISO] [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=IEA;ISO;ISS] [GO:0046849
"bone remodeling" evidence=IEA;ISO] [GO:0050793 "regulation of
developmental process" evidence=IEA] [GO:0051059 "NF-kappaB binding"
evidence=ISO] [GO:0060413 "atrial septum morphogenesis"
evidence=IEA;ISO] [GO:0060674 "placenta blood vessel development"
evidence=IEA;ISO] [GO:0070986 "left/right axis specification"
evidence=ISO] [GO:0072602 "interleukin-4 secretion" evidence=IEA;ISO]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 RGD:3188 GO:GO:0005634 GO:GO:0008285
GO:GO:0009986 GO:GO:0005887 GO:GO:0006355 GO:GO:0002437
eggNOG:COG0666 GO:GO:0016049 GO:GO:0046849 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0004872 GO:GO:0007050 GO:GO:0006351
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0043065 GO:GO:0009887
GO:GO:0030326 GO:GO:0007368 PROSITE:PS01186 GO:GO:0042246
PROSITE:PS00010 GO:GO:0006959 GO:GO:0050793 GO:GO:0001709
GO:GO:0046579 Pfam:PF12661 GO:GO:0002011 GO:GO:0072602
SUPFAM:SSF90193 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4853 OrthoDB:EOG4Q58NH
InterPro:IPR022336 PRINTS:PR01985 EMBL:M93661 IPI:IPI00211689
PIR:A49128 RefSeq:NP_077334.1 UniGene:Rn.65930
ProteinModelPortal:Q9QW30 SMR:Q9QW30 STRING:Q9QW30 PhosphoSite:Q9QW30
PRIDE:Q9QW30 GeneID:29492 KEGG:rno:29492 UCSC:RGD:3188
InParanoid:Q9QW30 NextBio:609375 ArrayExpress:Q9QW30
Genevestigator:Q9QW30 GermOnline:ENSRNOG00000018835 Uniprot:Q9QW30
Length = 2471
Score = 183 (69.5 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 89/333 (26%), Positives = 127/333 (38%)
Query: 38 CIYGYCKGP-PDYSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGDHC 93
CI+G C G Y C C+ GW G++C V+ CL N C +G G C+ G C
Sbjct: 729 CIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSN---PCQNG-GTCNNL---VNGYRC 781
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGY 151
C+ G G Q +C N N G C D ++G C C GKNC+ L
Sbjct: 782 T-CKKGFKGY-NCQVNIDECASNPCLNQ--GTCLDDVSGYTCHCMLPYTGKNCQTVLAPC 837
Query: 152 YGDPTDGGTCYYQCM---ARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECL--WIIGQS 206
+P + + + L PG QG +R + + S+ C+ I +
Sbjct: 838 SPNPCENAAVCKEAPNFESFTCLCAPGWQG------QRCTVDVDECVSKPCMNNGICHNT 891
Query: 207 LDSNST-APADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
S P + + DIN C N D V + +G C DM
Sbjct: 892 QGSYMCECPPGFSGMDCEEDIN-DCLANPCQNGGSCVDKVNTFSCLCLPGFVGDKCQTDM 950
Query: 266 HRGYEVLEAKSGVMTIH---YKQGKPSEGFNATY---QIFSCPDK-CPENRTCINN---- 314
+ G + + Y P+ GF+ + I C + C TC++
Sbjct: 951 NECLSEPCKNGGTCSDYVNSYTCTCPA-GFHGVHCENNIDECTESSCFNGGTCVDGINSF 1009
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
C+CP TGP C +I NEC + LN GTC
Sbjct: 1010 SCLCPVGFTGPFCLHDI--NECSSNPCLNSGTC 1040
Score = 148 (57.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 83/334 (24%), Positives = 125/334 (37%)
Query: 37 KCIYG-YCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
+C +G C P Y CQC +TG C + S CV+G G C + D+T+ C
Sbjct: 191 RCQHGGTCLNLPGSYRCQCPQRFTGQHCDSPYVPCAPSPCVNG-GTCRQTGDFTS--EC- 246
Query: 95 YCRAGSYGNATTQEGCRKC--DCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCERCLPG 150
+C G G+ C + DC +H GVC D + T C C G+ C +
Sbjct: 247 HCLPGFEGS-----NCERNIDDCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDE 301
Query: 151 YYGDPT---DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSL 207
P +GGTC + G + G G + TP C+ +
Sbjct: 302 CLLQPNACQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFS 361
Query: 208 DSNSTAPADIILLRLQPDINVPCNENAVYIYDGLP-DFVTSVGGTHQSTTLGVFCTED-- 264
A ++ I+ PC++ A+ + L ++ + ++ G CTED
Sbjct: 362 CLCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQAYK----GADCTEDVD 417
Query: 265 ---MHRGYEVLEAKSGVMT---IHYKQGKPSEGFNATYQIFSC-PDKCPENRTCINN--- 314
M A V T H + K G I C D C + TC++
Sbjct: 418 ECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGG 477
Query: 315 -QCVCPPRRTGPDCQEEICPNECHE--FLNHGTC 345
C+C P G C+ E+ NEC +N+G C
Sbjct: 478 FTCLCMPGFKGVHCELEV--NECQSNPCVNNGQC 509
Score = 138 (53.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 93/343 (27%), Positives = 129/343 (37%)
Query: 36 NKCIY-GYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
N C+ G C + + C C G+TG C ++ + + C++G +C D G C
Sbjct: 501 NPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGA----KCIDHPNGYEC 556
Query: 94 QYCRAGSYGNATTQEGCRKCD---CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
Q C G G E CD C+ HG G+ DS T CIC G C +
Sbjct: 557 Q-CATGFTGTLC-DENIDNCDPDPCH-HGQCQDGI-DSYT--CICNPGYMGAICSDQIDE 610
Query: 151 YYGDPT-DGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIG 204
Y P + G C YQC + PG GL E N + P + G
Sbjct: 611 CYSSPCLNDGRCIDLVNGYQCNCQ-----PGTSGLN---CEINFDDCASNPCLHGACVDG 662
Query: 205 QSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYD--GL----------PDFVTSV 248
+ S +P R DI+ PC ++A I D G P + V
Sbjct: 663 INRYSCVCSPG-FTGQRCNIDIDECASNPCRKDATCINDVNGFRCMCPEGPHHPSCYSQV 721
Query: 249 GGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPEN 308
S + CT + GY+ L +G + I+ + K N + S P C
Sbjct: 722 NECLSSPCIHGNCTGGLS-GYKCL-CDAGWVGINCEVDK-----N---ECLSNP--CQNG 769
Query: 309 RTCIN--N--QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
TC N N +C C G +CQ I +EC + LN GTC
Sbjct: 770 GTCNNLVNGYRCTCKKGFKGYNCQVNI--DECASNPCLNQGTC 810
Score = 128 (50.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 44/150 (29%), Positives = 55/150 (36%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KCI P Y CQC G+TG C N + C HG +C D
Sbjct: 541 CLNGAKCI----DHPNGYECQCATGFTGTLCDENIDNCDPDPCHHG-----QCQDGIDSY 591
Query: 92 HCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCL 148
C C G G + + C C + G + D + G +C CQ T G NCE
Sbjct: 592 TC-ICNPGYMGAICSDQIDECYSSPCLNDGRCI----DLVNGYQCNCQPGTSGLNCEINF 646
Query: 149 PGYYGDPTDGGTCY-----YQCMARGMLTG 173
+P G C Y C+ TG
Sbjct: 647 DDCASNPCLHGACVDGINRYSCVCSPGFTG 676
Score = 114 (45.2 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 39/135 (28%), Positives = 58/135 (42%)
Query: 34 CYNKCIYGYCKGPPDY---SCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTT 89
C N + CK P++ +C C GW G C+V+ C + C++ GIC H+ T
Sbjct: 842 CENAAV---CKEAPNFESFTCLCAPGWQGQRCTVDVDECVS-KPCMNN-GIC---HN-TQ 892
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCERC 147
G + C G + +E C N N G C D + T C+C G C+
Sbjct: 893 GSYMCECPPG-FSGMDCEEDINDCLANPCQNG--GSCVDKVNTFSCLCLPGFVGDKCQTD 949
Query: 148 LPGYYGDPT-DGGTC 161
+ +P +GGTC
Sbjct: 950 MNECLSEPCKNGGTC 964
Score = 111 (44.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 46/166 (27%), Positives = 65/166 (39%)
Query: 20 RCTVLLLYIFNASLCYNK-CIY-GYCKGPP-DYSCQCELGWTGVDCS--VN-CL---CNN 70
RCTV + C +K C+ G C Y C+C G++G+DC +N CL C N
Sbjct: 869 RCTV------DVDECVSKPCMNNGICHNTQGSYMCECPPGFSGMDCEEDINDCLANPCQN 922
Query: 71 HSTCVHGIGICD-ECHDWTTGDHCQYCRAGSYGNATTQEGCRKCD-CNSHGNSVLGVCDS 128
+CV + C GD CQ + N E C+ C+ + NS C +
Sbjct: 923 GGSCVDKVNTFSCLCLPGFVGDKCQ-----TDMNECLSEPCKNGGTCSDYVNSYTCTCPA 977
Query: 129 ITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGP 174
C++N C G G DG + C+ TGP
Sbjct: 978 GFHGVHCENNIDECTESSCFNG--GTCVDGINSF-SCLCPVGFTGP 1020
Score = 108 (43.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 35/119 (29%), Positives = 51/119 (42%)
Query: 49 YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NATT 106
+ CQC LG+TG C C ++ C HG C D+ G C+ C G G N
Sbjct: 1133 HHCQCPLGYTGSYCEEQLDECASNP-CQHGA----TCSDFIGGYRCE-CVPGYQGVNCEY 1186
Query: 107 Q-EGCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCLPGYYGDP--TDGGTC 161
+ + C+ C + G + D + +C C T+G CE + G P +GG C
Sbjct: 1187 EVDECQNQPCQNGGTCI----DLVNHFKCSCPPGTRGLLCEENIDDCAGAPHCLNGGQC 1241
Score = 106 (42.4 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 33/118 (27%), Positives = 49/118 (41%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
Y C C++G+TG C +C +H C +G C C+ C AG G +
Sbjct: 129 YECTCQVGFTGKQCQWTDVCLSHP-CENG----STCSSVANQFSCR-CPAGITGQKCDAD 182
Query: 109 GCRKCD----CNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYGDPTDGGTC 161
+CD C HG + L + S C C G++C+ +P +GGTC
Sbjct: 183 -INECDIPGRCQ-HGGTCLNLPGSY--RCQCPQRFTGQHCDSPYVPCAPSPCVNGGTC 236
Score = 101 (40.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 41/139 (29%), Positives = 55/139 (39%)
Query: 50 SCQCELGWTGVDC--SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+C+C G+TG DC S + C C +G G C W T + C C+ G G
Sbjct: 89 TCRCAPGFTGEDCQYSTSHPCFVSRPCQNG-GTCHML-SWDTYE-CT-CQVGFTGKQ--- 141
Query: 108 EGCRKCD-CNSHGNSVLGVCDSITGE--CICQDNTQGKNCE----RC-LPGYYGDPTDGG 159
C+ D C SH C S+ + C C G+ C+ C +PG GG
Sbjct: 142 --CQWTDVCLSHPCENGSTCSSVANQFSCRCPAGITGQKCDADINECDIPGRC---QHGG 196
Query: 160 TCY-----YQCMARGMLTG 173
TC Y+C TG
Sbjct: 197 TCLNLPGSYRCQCPQRFTG 215
Score = 92 (37.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 42/139 (30%), Positives = 50/139 (35%)
Query: 36 NKCIY-GYC-KGPPDYSCQCELGWTGVDCS--VN-CL---CNNHSTCVHGIGI--CDECH 85
N C+ G C G Y C C LG+TG +C VN C C N TC C C
Sbjct: 1032 NPCLNSGTCVDGLGTYRCTCPLGYTGKNCQTLVNLCSPSPCKNKGTCAQEKARPRC-LCP 1090
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSI--TGECICQDNTQGKN 143
G +C S A Q+G H G+C + T C C G
Sbjct: 1091 PGWDGAYCDVLNV-SCKAAALQKGVPVEHLCQHS----GICINAGNTHHCQCPLGYTGSY 1145
Query: 144 CERCLPGYYGDPTD-GGTC 161
CE L +P G TC
Sbjct: 1146 CEEQLDECASNPCQHGATC 1164
Score = 89 (36.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCIN--N--QCVCPPRRTGPDCQEEI--CPNECHEFLNH 342
+G N Y++ C ++ C TCI+ N +C CPP G C+E I C H LN
Sbjct: 1180 QGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCAGAPH-CLNG 1238
Query: 343 GTC 345
G C
Sbjct: 1239 GQC 1241
Score = 82 (33.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGT 344
+G + ++ C C N C++ QC+CPP TGP CQ +I LN
Sbjct: 487 KGVHCELEVNECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAK 546
Query: 345 C 345
C
Sbjct: 547 C 547
Score = 68 (29.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 313 NNQCVCPPRRTGPDCQE--EICPNE-CHEFLNHGTC 345
N QCVC TG C+ ++CP + C LN GTC
Sbjct: 1287 NYQCVCRSAFTGRHCETFLDVCPQKPC---LNGGTC 1319
Score = 68 (29.0 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 24/71 (33%), Positives = 34/71 (47%)
Query: 291 GFNATY---QIFSC-PDKCPENRTC---INNQ-CVCPPRRTGPDCQEEICPNECHEF--L 340
GF T I +C PD C + C I++ C+C P G C ++I +EC+ L
Sbjct: 561 GFTGTLCDENIDNCDPDPCHHGQ-CQDGIDSYTCICNPGYMGAICSDQI--DECYSSPCL 617
Query: 341 NHGTCDLLLTG 351
N G C L+ G
Sbjct: 618 NDGRCIDLVNG 628
Score = 67 (28.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 291 GFNATY---QIFSCPDK-CPENRTCIN----NQCVCPPRRTGPDCQEEI--CPNE-CHEF 339
G+ +Y Q+ C C TC + +C C P G +C+ E+ C N+ C
Sbjct: 1140 GYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQ-- 1197
Query: 340 LNHGTC-DLL 348
N GTC DL+
Sbjct: 1198 -NGGTCIDLV 1206
Score = 65 (27.9 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 22/72 (30%), Positives = 30/72 (41%)
Query: 305 CPENRTCIN----NQCVCPPRRTGPDCQEEICPNECHEF-LNHG-TCDLLLTGVHIT--- 355
C + CIN + C CP TG C+E++ +EC HG TC + G
Sbjct: 1120 CQHSGICINAGNTHHCQCPLGYTGSYCEEQL--DECASNPCQHGATCSDFIGGYRCECVP 1177
Query: 356 --HGRTLHYQVD 365
G Y+VD
Sbjct: 1178 GYQGVNCEYEVD 1189
Score = 61 (26.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTGVHIT--HG-RTLHYQVDLIRC 369
+C+C G +C E+ NEC + N GTC+ L+ G T G + + QV++ C
Sbjct: 742 KCLCDAGWVGINC--EVDKNECLSNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDEC 799
Score = 50 (22.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 15/44 (34%), Positives = 18/44 (40%)
Query: 301 CPDK-CPENRTCI--NNQ-----CVCPPRRTGPDCQEEICPNEC 336
CP K C TC +N C CPP +G CQ +C
Sbjct: 1308 CPQKPCLNGGTCAVASNVPDGFICRCPPGFSGARCQSSCGQVKC 1351
>UNIPROTKB|Q9QW30 [details] [associations]
symbol:Notch2 "Neurogenic locus notch homolog protein 2"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0050793 "regulation of developmental process"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
RGD:3188 GO:GO:0005634 GO:GO:0008285 GO:GO:0009986 GO:GO:0005887
GO:GO:0006355 GO:GO:0002437 eggNOG:COG0666 GO:GO:0016049
GO:GO:0046849 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0004872 GO:GO:0007050 GO:GO:0006351 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0043065 GO:GO:0009887 GO:GO:0030326
GO:GO:0007368 PROSITE:PS01186 GO:GO:0042246 PROSITE:PS00010
GO:GO:0006959 GO:GO:0050793 GO:GO:0001709 GO:GO:0046579
Pfam:PF12661 GO:GO:0002011 GO:GO:0072602 SUPFAM:SSF90193
HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4853 OrthoDB:EOG4Q58NH
InterPro:IPR022336 PRINTS:PR01985 EMBL:M93661 IPI:IPI00211689
PIR:A49128 RefSeq:NP_077334.1 UniGene:Rn.65930
ProteinModelPortal:Q9QW30 SMR:Q9QW30 STRING:Q9QW30
PhosphoSite:Q9QW30 PRIDE:Q9QW30 GeneID:29492 KEGG:rno:29492
UCSC:RGD:3188 InParanoid:Q9QW30 NextBio:609375 ArrayExpress:Q9QW30
Genevestigator:Q9QW30 GermOnline:ENSRNOG00000018835 Uniprot:Q9QW30
Length = 2471
Score = 183 (69.5 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 89/333 (26%), Positives = 127/333 (38%)
Query: 38 CIYGYCKGP-PDYSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGDHC 93
CI+G C G Y C C+ GW G++C V+ CL N C +G G C+ G C
Sbjct: 729 CIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSN---PCQNG-GTCNNL---VNGYRC 781
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGY 151
C+ G G Q +C N N G C D ++G C C GKNC+ L
Sbjct: 782 T-CKKGFKGY-NCQVNIDECASNPCLNQ--GTCLDDVSGYTCHCMLPYTGKNCQTVLAPC 837
Query: 152 YGDPTDGGTCYYQCM---ARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECL--WIIGQS 206
+P + + + L PG QG +R + + S+ C+ I +
Sbjct: 838 SPNPCENAAVCKEAPNFESFTCLCAPGWQG------QRCTVDVDECVSKPCMNNGICHNT 891
Query: 207 LDSNST-APADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDM 265
S P + + DIN C N D V + +G C DM
Sbjct: 892 QGSYMCECPPGFSGMDCEEDIN-DCLANPCQNGGSCVDKVNTFSCLCLPGFVGDKCQTDM 950
Query: 266 HRGYEVLEAKSGVMTIH---YKQGKPSEGFNATY---QIFSCPDK-CPENRTCINN---- 314
+ G + + Y P+ GF+ + I C + C TC++
Sbjct: 951 NECLSEPCKNGGTCSDYVNSYTCTCPA-GFHGVHCENNIDECTESSCFNGGTCVDGINSF 1009
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
C+CP TGP C +I NEC + LN GTC
Sbjct: 1010 SCLCPVGFTGPFCLHDI--NECSSNPCLNSGTC 1040
Score = 148 (57.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 83/334 (24%), Positives = 125/334 (37%)
Query: 37 KCIYG-YCKG-PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
+C +G C P Y CQC +TG C + S CV+G G C + D+T+ C
Sbjct: 191 RCQHGGTCLNLPGSYRCQCPQRFTGQHCDSPYVPCAPSPCVNG-GTCRQTGDFTS--EC- 246
Query: 95 YCRAGSYGNATTQEGCRKC--DCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCERCLPG 150
+C G G+ C + DC +H GVC D + T C C G+ C +
Sbjct: 247 HCLPGFEGS-----NCERNIDDCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDE 301
Query: 151 YYGDPT---DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSL 207
P +GGTC + G + G G + TP C+ +
Sbjct: 302 CLLQPNACQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFS 361
Query: 208 DSNSTAPADIILLRLQPDINVPCNENAVYIYDGLP-DFVTSVGGTHQSTTLGVFCTED-- 264
A ++ I+ PC++ A+ + L ++ + ++ G CTED
Sbjct: 362 CLCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQAYK----GADCTEDVD 417
Query: 265 ---MHRGYEVLEAKSGVMT---IHYKQGKPSEGFNATYQIFSC-PDKCPENRTCINN--- 314
M A V T H + K G I C D C + TC++
Sbjct: 418 ECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGG 477
Query: 315 -QCVCPPRRTGPDCQEEICPNECHE--FLNHGTC 345
C+C P G C+ E+ NEC +N+G C
Sbjct: 478 FTCLCMPGFKGVHCELEV--NECQSNPCVNNGQC 509
Score = 138 (53.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 93/343 (27%), Positives = 129/343 (37%)
Query: 36 NKCIY-GYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
N C+ G C + + C C G+TG C ++ + + C++G +C D G C
Sbjct: 501 NPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGA----KCIDHPNGYEC 556
Query: 94 QYCRAGSYGNATTQEGCRKCD---CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
Q C G G E CD C+ HG G+ DS T CIC G C +
Sbjct: 557 Q-CATGFTGTLC-DENIDNCDPDPCH-HGQCQDGI-DSYT--CICNPGYMGAICSDQIDE 610
Query: 151 YYGDPT-DGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIG 204
Y P + G C YQC + PG GL E N + P + G
Sbjct: 611 CYSSPCLNDGRCIDLVNGYQCNCQ-----PGTSGLN---CEINFDDCASNPCLHGACVDG 662
Query: 205 QSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYD--GL----------PDFVTSV 248
+ S +P R DI+ PC ++A I D G P + V
Sbjct: 663 INRYSCVCSPG-FTGQRCNIDIDECASNPCRKDATCINDVNGFRCMCPEGPHHPSCYSQV 721
Query: 249 GGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCPEN 308
S + CT + GY+ L +G + I+ + K N + S P C
Sbjct: 722 NECLSSPCIHGNCTGGLS-GYKCL-CDAGWVGINCEVDK-----N---ECLSNP--CQNG 769
Query: 309 RTCIN--N--QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
TC N N +C C G +CQ I +EC + LN GTC
Sbjct: 770 GTCNNLVNGYRCTCKKGFKGYNCQVNI--DECASNPCLNQGTC 810
Score = 128 (50.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 44/150 (29%), Positives = 55/150 (36%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KCI P Y CQC G+TG C N + C HG +C D
Sbjct: 541 CLNGAKCI----DHPNGYECQCATGFTGTLCDENIDNCDPDPCHHG-----QCQDGIDSY 591
Query: 92 HCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCL 148
C C G G + + C C + G + D + G +C CQ T G NCE
Sbjct: 592 TC-ICNPGYMGAICSDQIDECYSSPCLNDGRCI----DLVNGYQCNCQPGTSGLNCEINF 646
Query: 149 PGYYGDPTDGGTCY-----YQCMARGMLTG 173
+P G C Y C+ TG
Sbjct: 647 DDCASNPCLHGACVDGINRYSCVCSPGFTG 676
Score = 114 (45.2 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 39/135 (28%), Positives = 58/135 (42%)
Query: 34 CYNKCIYGYCKGPPDY---SCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTT 89
C N + CK P++ +C C GW G C+V+ C + C++ GIC H+ T
Sbjct: 842 CENAAV---CKEAPNFESFTCLCAPGWQGQRCTVDVDECVS-KPCMNN-GIC---HN-TQ 892
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCERC 147
G + C G + +E C N N G C D + T C+C G C+
Sbjct: 893 GSYMCECPPG-FSGMDCEEDINDCLANPCQNG--GSCVDKVNTFSCLCLPGFVGDKCQTD 949
Query: 148 LPGYYGDPT-DGGTC 161
+ +P +GGTC
Sbjct: 950 MNECLSEPCKNGGTC 964
Score = 111 (44.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 46/166 (27%), Positives = 65/166 (39%)
Query: 20 RCTVLLLYIFNASLCYNK-CIY-GYCKGPP-DYSCQCELGWTGVDCS--VN-CL---CNN 70
RCTV + C +K C+ G C Y C+C G++G+DC +N CL C N
Sbjct: 869 RCTV------DVDECVSKPCMNNGICHNTQGSYMCECPPGFSGMDCEEDINDCLANPCQN 922
Query: 71 HSTCVHGIGICD-ECHDWTTGDHCQYCRAGSYGNATTQEGCRKCD-CNSHGNSVLGVCDS 128
+CV + C GD CQ + N E C+ C+ + NS C +
Sbjct: 923 GGSCVDKVNTFSCLCLPGFVGDKCQ-----TDMNECLSEPCKNGGTCSDYVNSYTCTCPA 977
Query: 129 ITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGP 174
C++N C G G DG + C+ TGP
Sbjct: 978 GFHGVHCENNIDECTESSCFNG--GTCVDGINSF-SCLCPVGFTGP 1020
Score = 108 (43.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 35/119 (29%), Positives = 51/119 (42%)
Query: 49 YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NATT 106
+ CQC LG+TG C C ++ C HG C D+ G C+ C G G N
Sbjct: 1133 HHCQCPLGYTGSYCEEQLDECASNP-CQHGA----TCSDFIGGYRCE-CVPGYQGVNCEY 1186
Query: 107 Q-EGCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCLPGYYGDP--TDGGTC 161
+ + C+ C + G + D + +C C T+G CE + G P +GG C
Sbjct: 1187 EVDECQNQPCQNGGTCI----DLVNHFKCSCPPGTRGLLCEENIDDCAGAPHCLNGGQC 1241
Score = 106 (42.4 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 33/118 (27%), Positives = 49/118 (41%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
Y C C++G+TG C +C +H C +G C C+ C AG G +
Sbjct: 129 YECTCQVGFTGKQCQWTDVCLSHP-CENG----STCSSVANQFSCR-CPAGITGQKCDAD 182
Query: 109 GCRKCD----CNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLPGYYGDPTDGGTC 161
+CD C HG + L + S C C G++C+ +P +GGTC
Sbjct: 183 -INECDIPGRCQ-HGGTCLNLPGSY--RCQCPQRFTGQHCDSPYVPCAPSPCVNGGTC 236
Score = 101 (40.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 41/139 (29%), Positives = 55/139 (39%)
Query: 50 SCQCELGWTGVDC--SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+C+C G+TG DC S + C C +G G C W T + C C+ G G
Sbjct: 89 TCRCAPGFTGEDCQYSTSHPCFVSRPCQNG-GTCHML-SWDTYE-CT-CQVGFTGKQ--- 141
Query: 108 EGCRKCD-CNSHGNSVLGVCDSITGE--CICQDNTQGKNCE----RC-LPGYYGDPTDGG 159
C+ D C SH C S+ + C C G+ C+ C +PG GG
Sbjct: 142 --CQWTDVCLSHPCENGSTCSSVANQFSCRCPAGITGQKCDADINECDIPGRC---QHGG 196
Query: 160 TCY-----YQCMARGMLTG 173
TC Y+C TG
Sbjct: 197 TCLNLPGSYRCQCPQRFTG 215
Score = 92 (37.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 42/139 (30%), Positives = 50/139 (35%)
Query: 36 NKCIY-GYC-KGPPDYSCQCELGWTGVDCS--VN-CL---CNNHSTCVHGIGI--CDECH 85
N C+ G C G Y C C LG+TG +C VN C C N TC C C
Sbjct: 1032 NPCLNSGTCVDGLGTYRCTCPLGYTGKNCQTLVNLCSPSPCKNKGTCAQEKARPRC-LCP 1090
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSI--TGECICQDNTQGKN 143
G +C S A Q+G H G+C + T C C G
Sbjct: 1091 PGWDGAYCDVLNV-SCKAAALQKGVPVEHLCQHS----GICINAGNTHHCQCPLGYTGSY 1145
Query: 144 CERCLPGYYGDPTD-GGTC 161
CE L +P G TC
Sbjct: 1146 CEEQLDECASNPCQHGATC 1164
Score = 89 (36.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCIN--N--QCVCPPRRTGPDCQEEI--CPNECHEFLNH 342
+G N Y++ C ++ C TCI+ N +C CPP G C+E I C H LN
Sbjct: 1180 QGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCAGAPH-CLNG 1238
Query: 343 GTC 345
G C
Sbjct: 1239 GQC 1241
Score = 82 (33.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGT 344
+G + ++ C C N C++ QC+CPP TGP CQ +I LN
Sbjct: 487 KGVHCELEVNECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAK 546
Query: 345 C 345
C
Sbjct: 547 C 547
Score = 68 (29.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 313 NNQCVCPPRRTGPDCQE--EICPNE-CHEFLNHGTC 345
N QCVC TG C+ ++CP + C LN GTC
Sbjct: 1287 NYQCVCRSAFTGRHCETFLDVCPQKPC---LNGGTC 1319
Score = 68 (29.0 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 24/71 (33%), Positives = 34/71 (47%)
Query: 291 GFNATY---QIFSC-PDKCPENRTC---INNQ-CVCPPRRTGPDCQEEICPNECHEF--L 340
GF T I +C PD C + C I++ C+C P G C ++I +EC+ L
Sbjct: 561 GFTGTLCDENIDNCDPDPCHHGQ-CQDGIDSYTCICNPGYMGAICSDQI--DECYSSPCL 617
Query: 341 NHGTCDLLLTG 351
N G C L+ G
Sbjct: 618 NDGRCIDLVNG 628
Score = 67 (28.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 291 GFNATY---QIFSCPDK-CPENRTCIN----NQCVCPPRRTGPDCQEEI--CPNE-CHEF 339
G+ +Y Q+ C C TC + +C C P G +C+ E+ C N+ C
Sbjct: 1140 GYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQ-- 1197
Query: 340 LNHGTC-DLL 348
N GTC DL+
Sbjct: 1198 -NGGTCIDLV 1206
Score = 65 (27.9 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 22/72 (30%), Positives = 30/72 (41%)
Query: 305 CPENRTCIN----NQCVCPPRRTGPDCQEEICPNECHEF-LNHG-TCDLLLTGVHIT--- 355
C + CIN + C CP TG C+E++ +EC HG TC + G
Sbjct: 1120 CQHSGICINAGNTHHCQCPLGYTGSYCEEQL--DECASNPCQHGATCSDFIGGYRCECVP 1177
Query: 356 --HGRTLHYQVD 365
G Y+VD
Sbjct: 1178 GYQGVNCEYEVD 1189
Score = 61 (26.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTGVHIT--HG-RTLHYQVDLIRC 369
+C+C G +C E+ NEC + N GTC+ L+ G T G + + QV++ C
Sbjct: 742 KCLCDAGWVGINC--EVDKNECLSNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDEC 799
Score = 50 (22.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 15/44 (34%), Positives = 18/44 (40%)
Query: 301 CPDK-CPENRTCI--NNQ-----CVCPPRRTGPDCQEEICPNEC 336
CP K C TC +N C CPP +G CQ +C
Sbjct: 1308 CPQKPCLNGGTCAVASNVPDGFICRCPPGFSGARCQSSCGQVKC 1351
>UNIPROTKB|F1PDC7 [details] [associations]
symbol:NOTCH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00066 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0016021 GO:GO:0007275
GO:GO:0030154 GO:GO:0006355 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219
GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793 Pfam:PF12661
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 OMA:HGGYNCV EMBL:AAEX03006755 EMBL:AAEX03006746
EMBL:AAEX03006747 EMBL:AAEX03006748 EMBL:AAEX03006749
EMBL:AAEX03006750 EMBL:AAEX03006751 EMBL:AAEX03006752
EMBL:AAEX03006753 EMBL:AAEX03006754 Ensembl:ENSCAFT00000031242
Uniprot:F1PDC7
Length = 2555
Score = 169 (64.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 85/322 (26%), Positives = 122/322 (37%)
Query: 38 CIYGYCKGPPD-YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHCQY 95
C G C D Y C CE G+TG C+VN C + C HG G C+ D C+
Sbjct: 645 CESGTCLDRIDGYECACEPGYTGSMCNVNIDECAGNP-CHHG-GTCE---DGINSFMCR- 698
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYYG 153
C G +G E +C N + G C DS+ G +C C G NC+
Sbjct: 699 CPEGYHGPTCLSE-VNECSSNP---CIHGACRDSLNGYKCDCDPGWSGANCDVNNNECES 754
Query: 154 DP-TDGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAW-EGK---DTPSRECLWII 203
+P +GG C Y C R +GP Q + A +G D +C +
Sbjct: 755 NPCANGGACRDMTSGYVCTCREGFSGPNCQTNINECASNPCLNQGSCIDDVAGYKCNCPL 814
Query: 204 GQSLDSNSTAPADIILLRLQPDINVPC-NENAVYIYDGLPDF--VTSVGGTHQSTTLGVF 260
+ A +++L P PC N A + F + G Q+ + +
Sbjct: 815 PYT-----GATCEVVLAPCAPS---PCRNGGACKESEDYESFSCICPTGWQGQTCEVDIN 866
Query: 261 -CTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSC-PDKCPENRTC---INNQ 315
C + R + +G H + G G N + C P+ C +C +N
Sbjct: 867 ECVKTPCRNGASCQNTNGGYRCHCRAGYT--GRNCETDVDDCRPNPCHNGGSCTDGVNTA 924
Query: 316 -CVCPPRRTGPDCQEEICPNEC 336
C C P GP C+E+I NEC
Sbjct: 925 FCDCLPGFQGPFCEEDI--NEC 944
Score = 153 (58.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 43/130 (33%), Positives = 57/130 (43%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
N CI+G C+ + Y C C+ GW+G +C VN + C +G G C D T+G C
Sbjct: 718 NPCIHGACRDSLNGYKCDCDPGWSGANCDVNNNECESNPCANG-GAC---RDMTSGYVCT 773
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYY 152
CR G + Q +C N N G C D + G +C C G CE L
Sbjct: 774 -CREG-FSGPNCQTNINECASNPCLNQ--GSCIDDVAGYKCNCPLPYTGATCEVVLAPCA 829
Query: 153 GDPT-DGGTC 161
P +GG C
Sbjct: 830 PSPCRNGGAC 839
Score = 133 (51.9 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 45/151 (29%), Positives = 57/151 (37%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KC+ GP YSC C G+TG+ C V+ + C +G+ C D
Sbjct: 532 CKNGAKCL----DGPNTYSCMCTEGYTGLHCEVDIDECDPDPCHYGV-----CKDGVATF 582
Query: 92 HCQYCRAGSYGN--ATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERC 147
C C+ G G+ + C C HG G C C C T G NCE
Sbjct: 583 TC-LCQPGYTGHHCESNINECHSQPCR-HG----GTCQDRDNAYLCSCLKGTTGPNCETN 636
Query: 148 LPGYYGDPTDGGTCY-----YQCMARGMLTG 173
L P + GTC Y+C TG
Sbjct: 637 LDDCASSPCESGTCLDRIDGYECACEPGYTG 667
Score = 128 (50.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 45/145 (31%), Positives = 58/145 (40%)
Query: 41 GYCKGPPDY---SCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCR 97
G CK DY SC C GW G C V+ + C +G C + G C +CR
Sbjct: 837 GACKESEDYESFSCICPTGWQGQTCEVDINECVKTPCRNGAS----CQNTNGGYRC-HCR 891
Query: 98 AGSYG-NATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
AG G N T + CR C++ G+ GV T C C QG CE + +P
Sbjct: 892 AGYTGRNCETDVDDCRPNPCHNGGSCTDGVN---TAFCDCLPGFQGPFCEEDINECASNP 948
Query: 156 TDGGTCYYQCMARGMLTGP-GPQGL 179
G C+ T P G G+
Sbjct: 949 CRHGANCTDCVDSYTCTCPTGFSGI 973
Score = 127 (49.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 77/327 (23%), Positives = 117/327 (35%)
Query: 38 CIYGY-CKGP-PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
C +G C + C+C G TG+ C +N C ++ C G CD + G
Sbjct: 339 CFHGATCHDRVASFYCECPHGRTGLLCHLNDACISNP-CNEGSN-CDT--NPVNGKAICT 394
Query: 96 CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYG 153
C +G G A +Q+ +C ++ G C + G EC C G CE +
Sbjct: 395 CPSGYTGPACSQD-VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECIS 453
Query: 154 DPTDG-GTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRE---CLWIIGQSLDS 209
+P TC Q + PG +G+ E N E +P + CL I + L
Sbjct: 454 NPCQNDATCLDQIGEFQCICMPGYEGVH---CEVNTDECASSPCLQNGRCLDKINEFLCE 510
Query: 210 NSTA-PADIILLRLQPDINVPCNENAVYIYDGLPDF--VTSVG--GTHQSTTLGVFCTED 264
T + + + PC +N DG + + + G G H + +
Sbjct: 511 CPTGFTGHLCQYDVDECASTPC-KNGAKCLDGPNTYSCMCTEGYTGLHCEVDIDECDPDP 569
Query: 265 MHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDK-CPENRTCINNQ----CVCP 319
H G K GV T G + I C + C TC + C C
Sbjct: 570 CHYGV----CKDGVATFTCLCQPGYTGHHCESNINECHSQPCRHGGTCQDRDNAYLCSCL 625
Query: 320 PRRTGPDCQEEICPNECHEF-LNHGTC 345
TGP+C+ + ++C GTC
Sbjct: 626 KGTTGPNCETNL--DDCASSPCESGTC 650
Score = 123 (48.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 46/151 (30%), Positives = 62/151 (41%)
Query: 36 NKCIYGY-CKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGIC-DECHDWTTGDH 92
N C +G C D Y+C C G++G+ C N S+C +G G C D + +T
Sbjct: 947 NPCRHGANCTDCVDSYTCTCPTGFSGIHCENNTPDCTESSCFNG-GTCVDGINSFT---- 1001
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNS--HGNSVLGVC-DSI-TGECICQDNTQGKNCERCL 148
C C G G+ Q +CD HG G C DS T C C G NC+ +
Sbjct: 1002 C-LCPPGFTGSYC-QHDINECDSRPCLHG----GTCQDSYGTYRCTCPQGYTGLNCQNLV 1055
Query: 149 PGYYGDPT-DGGTCY-----YQCMARGMLTG 173
P +GG C+ Y+C TG
Sbjct: 1056 RWCDSSPCKNGGKCWQSNTLYRCECHSGWTG 1086
Score = 121 (47.7 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 41/141 (29%), Positives = 54/141 (38%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT-TQ 107
Y+C C GWTG DCS N + C HG CHD +C+ C G G
Sbjct: 314 YNCVCVNGWTGEDCSENIDDCASAACFHGA----TCHDRVASFYCE-CPHGRTGLLCHLN 368
Query: 108 EGCRKCDCNSHGNSVLGVCDS--ITGE--CICQDNTQGKNC----ERCLPGYYGDPTD-G 158
+ C CN N CD+ + G+ C C G C + C G +P +
Sbjct: 369 DACISNPCNEGSN-----CDTNPVNGKAICTCPSGYTGPACSQDVDECSLG--ANPCEHA 421
Query: 159 GTCY-----YQCMARGMLTGP 174
G C ++C TGP
Sbjct: 422 GKCINTLGSFECQCLQGYTGP 442
Score = 105 (42.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 39/129 (30%), Positives = 53/129 (41%)
Query: 36 NKCIYG-YC-KGPPDYSCQCELGWTGVDCSVN---C-----LCNNHSTC--VHGIGICDE 83
N C G C G Y+C+C WTG C+ + C C N TC HG C
Sbjct: 259 NNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNTHGGYNCVC 318
Query: 84 CHDWTTGDHCQY----CR-AGSYGNATTQEGCRK--CDCNSHGNSVLGVCDSITGECICQ 136
+ WT G+ C C A + AT + C+C HG + L +C + CI
Sbjct: 319 VNGWT-GEDCSENIDDCASAACFHGATCHDRVASFYCEC-PHGRTGL-LCH-LNDACISN 374
Query: 137 DNTQGKNCE 145
+G NC+
Sbjct: 375 PCNEGSNCD 383
Score = 98 (39.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 33/119 (27%), Positives = 51/119 (42%)
Query: 48 DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+Y C+C GW+G C C ++ C +G G +C + C C G +G T +
Sbjct: 119 EYKCRCPPGWSGKTCQQADPCASNP-CANG-G---QCLPFEASYICG-CPPGFHG-PTCR 171
Query: 108 EGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERCLPGYYGDPT---DGGTC 161
+ +C + G C + G C C+ G +CE LP P+ +GGTC
Sbjct: 172 QDVNECSQSPGLCQNGGTCHNEVGSYRCTCRATHTGPHCE--LPYVPCSPSPCQNGGTC 228
Score = 98 (39.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 40/141 (28%), Positives = 56/141 (39%)
Query: 45 GPPDYSCQCELGWTGVDCSV--NCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG 102
G DY+C C LG++G C + C + + C +G G CD T C+ C G G
Sbjct: 76 GLVDYACTCRLGFSGPLCLTPRDNACLS-TPCRNG-GTCDLLT--LTEYKCR-CPPGWSG 130
Query: 103 NATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP---TDG 158
Q + C C + G + I G C G C + + P +G
Sbjct: 131 KTCQQADPCASNPCANGGQCLPFEASYICG---CPPGFHGPTCRQDVNECSQSPGLCQNG 187
Query: 159 GTCY-----YQCMARGMLTGP 174
GTC+ Y+C R TGP
Sbjct: 188 GTCHNEVGSYRCTCRATHTGP 208
Score = 97 (39.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 43/159 (27%), Positives = 60/159 (37%)
Query: 36 NKCIYGYCKGPP-------DYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIG--I 80
N+CI C+ ++ C C G+ GV C VN C C + C+ I +
Sbjct: 449 NECISNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLQNGRCLDKINEFL 508
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C EC TG CQY E C C + + G T C+C +
Sbjct: 509 C-ECPTGFTGHLCQY---------DVDE-CASTPCKNGAKCLDG---PNTYSCMCTEGYT 554
Query: 141 GKNCE----RCLPG--YYGDPTDGGTCYYQCMARGMLTG 173
G +CE C P +YG DG + C+ + TG
Sbjct: 555 GLHCEVDIDECDPDPCHYGVCKDG-VATFTCLCQPGYTG 592
Score = 96 (38.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 42/139 (30%), Positives = 53/139 (38%)
Query: 36 NKCIYG-YCKG-PPDYSCQCELGWTGVDC--SVN-C-----LCNNHSTCVHGIGI--CDE 83
N C G C Y C C G+ G C VN C LC N TC + +G C
Sbjct: 142 NPCANGGQCLPFEASYICGCPPGFHGPTCRQDVNECSQSPGLCQNGGTCHNEVGSYRCT- 200
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C TG HC+ Y C C + G + D+ T EC C G+N
Sbjct: 201 CRATHTGPHCEL----PY------VPCSPSPCQN-GGTCRPTGDT-THECACLPGFTGQN 248
Query: 144 CERCLPGYYGDPT-DGGTC 161
CE + G+ +GG C
Sbjct: 249 CEENIDDCPGNNCKNGGAC 267
Score = 94 (38.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 42/135 (31%), Positives = 56/135 (41%)
Query: 32 SLCYNKCIY-GYCKGP-PDYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGICD- 82
SL N C + G C + CQC G+TG C ++ C+ C N +TC+ IG
Sbjct: 412 SLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQC 471
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDS-ITGECICQ---D- 137
C G HC+ + Q G R C N L C + TG +CQ D
Sbjct: 472 ICMPGYEGVHCEVNTDECASSPCLQNG-R---CLDKINEFLCECPTGFTGH-LCQYDVDE 526
Query: 138 --NTQGKNCERCLPG 150
+T KN +CL G
Sbjct: 527 CASTPCKNGAKCLDG 541
Score = 90 (36.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 27/77 (35%), Positives = 32/77 (41%)
Query: 291 GFNATYQIFSCP-DKCPENRTCINN----QCVCPPRRTGPDCQEEI--C---PNECHEFL 340
G N I CP + C C++ C CPP TG C E++ C PN C
Sbjct: 246 GQNCEENIDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQ--- 302
Query: 341 NHGTCDLLLTGVHITHG 357
N GTC H THG
Sbjct: 303 NGGTC-------HNTHG 312
Score = 82 (33.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 29/93 (31%), Positives = 42/93 (45%)
Query: 291 GFNATY---QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFL 340
G+ +Y Q+ C P C TC + C C G +C EE+ NEC H
Sbjct: 1131 GYTGSYCEDQVDECSPSPCQNGATCTDYPGGYSCECVAGYHGVNCSEEM--NECLSHPCQ 1188
Query: 341 NHGTC-DLLLT-GVHITHG-RTLHYQVDLIRCT 370
N GTC DL+ T G + +H +V++ C+
Sbjct: 1189 NGGTCIDLINTYKCSCPRGTQGVHCEVNVDDCS 1221
Score = 81 (33.6 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 291 GFNATYQIFSCPD----KCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHE--FL 340
GF+ + + PD C TC++ C+CPP TG CQ +I NEC L
Sbjct: 969 GFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQHDI--NECDSRPCL 1026
Query: 341 NHGTC 345
+ GTC
Sbjct: 1027 HGGTC 1031
Score = 74 (31.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 287 KPSEGFNATYQIFSCPDKCPENRTCINN----QCVCPPRRTGPDCQ---EEICPNECHEF 339
K + G N + C E+ TC++ +C C P TG C +E N CH
Sbjct: 626 KGTTGPNCETNLDDCASSPCESGTCLDRIDGYECACEPGYTGSMCNVNIDECAGNPCH-- 683
Query: 340 LNHGTCD 346
+ GTC+
Sbjct: 684 -HGGTCE 689
Score = 70 (29.7 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 304 KCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC 336
KC N TC++ C CPP G C+ ++ NEC
Sbjct: 1232 KCFNNGTCVDQVGGYSCTCPPGFVGERCEGDV--NEC 1266
Score = 69 (29.3 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 296 YQIFSCPDKCP---ENRTC-IN-NQCVCPPRRTGPDCQEEICPNECH 337
Y+ FSC CP + +TC ++ N+CV P R G CQ CH
Sbjct: 845 YESFSCI--CPTGWQGQTCEVDINECVKTPCRNGASCQNTNGGYRCH 889
Score = 64 (27.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 290 EGFNATYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNECHEFLN 341
+G I C C +C N +C C TG +C+ ++ C PN CH N
Sbjct: 857 QGQTCEVDINECVKTPCRNGASCQNTNGGYRCHCRAGYTGRNCETDVDDCRPNPCH---N 913
Query: 342 HGTC 345
G+C
Sbjct: 914 GGSC 917
Score = 59 (25.8 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 19/64 (29%), Positives = 25/64 (39%)
Query: 290 EGF---NATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLN 341
EGF N I C C +CI++ +C CP TG C+ + P N
Sbjct: 776 EGFSGPNCQTNINECASNPCLNQGSCIDDVAGYKCNCPLPYTGATCEVVLAPCAPSPCRN 835
Query: 342 HGTC 345
G C
Sbjct: 836 GGAC 839
Score = 58 (25.5 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQEEI---CP--NECHEF 339
EG +C + C TCI+ C+C TGP+CQ C N C+
Sbjct: 1336 EGATCENDARACGSRRCLNGGTCISGPRSPTCLCLGPFTGPECQFPAGSPCVGGNPCY-- 1393
Query: 340 LNHGTCD 346
N G+C+
Sbjct: 1394 -NQGSCE 1399
Score = 55 (24.4 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 311 CINNQ-CVCPPRRTG-------PDCQEEICPN--ECHEFLNHGTC 345
C+++ C CP +G PDC E C N C + +N TC
Sbjct: 958 CVDSYTCTCPTGFSGIHCENNTPDCTESSCFNGGTCVDGINSFTC 1002
Score = 51 (23.0 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 309 RTCINN-QCVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
R +N +C C P +G +C ++ NEC N G C + +G
Sbjct: 726 RDSLNGYKCDCDPGWSGANC--DVNNNECESNPCANGGACRDMTSG 769
Score = 48 (22.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C CP G C+ + LN GTC
Sbjct: 1329 CKCPAGFEGATCENDARACGSRRCLNGGTC 1358
Score = 45 (20.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 314 NQCVCPPRRTGPDCQEEI--C-PNECHEFLNHGTC 345
+ C C TG C++++ C P+ C N TC
Sbjct: 1124 HHCRCQAGYTGSYCEDQVDECSPSPCQ---NGATC 1155
Score = 43 (20.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 314 NQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVH 353
N+C P R G +C + + C TC +G+H
Sbjct: 942 NECASNPCRHGANCTDCVDSYTC-------TCPTGFSGIH 974
Score = 41 (19.5 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 329 EEICP-NECHEFLNHGTCDL 347
EE C ECHE + C L
Sbjct: 1441 EEACELPECHEEAGNKVCSL 1460
Score = 40 (19.1 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 316 CVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
C C TG C+ I N C N GTC
Sbjct: 1288 CECRAGHTGRRCESII--NGCKGRPCQNGGTC 1317
>UNIPROTKB|F1NSD2 [details] [associations]
symbol:JAG2 "Delta-like protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0005112 "Notch binding" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008083 "growth factor
activity" evidence=IEA] [GO:0009912 "auditory receptor cell fate
commitment" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0042492 "gamma-delta T cell
differentiation" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0045061 "thymic T cell selection"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001007
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
InterPro:IPR018097 InterPro:IPR026219 Pfam:PF00008 Pfam:PF01414
Pfam:PF07645 Pfam:PF07657 PRINTS:PR02059 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051 SMART:SM00179
SMART:SM00181 SMART:SM00214 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0030154 GO:GO:0030155 GO:GO:0042981
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042127 PROSITE:PS01186 PROSITE:PS00010
GeneTree:ENSGT00700000104308 OMA:HHPCTNG EMBL:AADN02003825
EMBL:AADN02003826 EMBL:AADN02003827 EMBL:AADN02003828
IPI:IPI00813003 Ensembl:ENSGALT00000019118 Uniprot:F1NSD2
Length = 1211
Score = 151 (58.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 47/140 (33%), Positives = 62/140 (44%)
Query: 30 NASLCYNK-CIYGY-CKGP-PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGIC-DECH 85
+A+ C K C+ Y CK Y C C GW GV+C +N + + H C HG G C DE +
Sbjct: 392 DANECEGKPCVNAYSCKNLIGGYYCDCIPGWKGVNCHIN-INDCHGQCQHG-GTCKDEVN 449
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKN 143
D+ HC C G G E +C+ N N G C D + G C+C G
Sbjct: 450 DY----HC-ICPRGFTGKNCEIE-TNECESNPCQNG--GRCKDLVNGFTCLCAQGFSGVF 501
Query: 144 CERCLPGYYGDPTDGGT-CY 162
CE + +P G CY
Sbjct: 502 CEMDIDFCEPNPCQNGAKCY 521
Score = 128 (50.1 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 36/131 (27%), Positives = 49/131 (37%)
Query: 35 YNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC 93
Y C +G C P + C CE W G+ C+ + C NH C++G G C T D
Sbjct: 248 YPGCAHGSCNEP--WQCNCETNWGGLLCNKDLNYCGNHHPCLNG-GTCMN----TEPDEY 300
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGY 151
+ Y + C N N G C I+ +C C G C +
Sbjct: 301 RCACPDGYSGKNCEIAEHACVSNPCANG--GTCHEISSSFKCHCPSGWSGPTCAIDIDEC 358
Query: 152 YGDP-TDGGTC 161
+P GGTC
Sbjct: 359 ASNPCAQGGTC 369
Score = 125 (49.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 42/154 (27%), Positives = 61/154 (39%)
Query: 32 SLCYNKC--IYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTT 89
++C C ++G C P + C+C GW G C C + C HG C+E W
Sbjct: 212 AVCKQGCNLLHGGCSVPGE--CKCHYGWQGQYCDE---CVRYPGCAHGS--CNE--PW-- 260
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE---CICQDNTQGKNCER 146
C C ++G + C N H G C + + C C D GKNCE
Sbjct: 261 --QCN-CET-NWGGLLCNKDLNYCG-NHHPCLNGGTCMNTEPDEYRCACPDGYSGKNCEI 315
Query: 147 CLPGYYGDP-TDGGTCY-----YQCMARGMLTGP 174
+P +GGTC+ ++C +GP
Sbjct: 316 AEHACVSNPCANGGTCHEISSSFKCHCPSGWSGP 349
Score = 124 (48.7 bits), Expect = 0.00035, P = 0.00035
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 30 NASLCYNKCIYG-YCKGPPD-YSCQCELGWTGVDCSVNCL-CNNHSTCVHGIGICDECHD 86
N+S N C+ G C G D +SC C+ GW G C+ N CN H C +G GIC + +
Sbjct: 725 NSSCIPNPCMNGGTCVGSGDSFSCICKEGWEGRTCTQNTNDCNPHP-CYNG-GICVDGVN 782
Query: 87 WTTGDHCQYCRAGSYGN--ATTQEGCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKN 143
W C+ C G G + C+ C +G + + D I G C C G
Sbjct: 783 WF---RCE-CAPGFAGPDCRINIDECQSSPCG-YGATCI---DEINGYRCTCPPGRVGPR 834
Query: 144 CERCL 148
C+ +
Sbjct: 835 CQEVI 839
Score = 114 (45.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 42/141 (29%), Positives = 62/141 (43%)
Query: 36 NKC-IYGYCKGPP--DYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGICDECHD 86
N C +G C P +++C C+ G+TG+ C N CL C N TC+ DE
Sbjct: 577 NVCGPHGRCISQPGGNFTCACDRGFTGIYCHENINDCLGKPCKNGGTCI------DEVDS 630
Query: 87 WTTGDHCQYCRAGSYGNA--TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
+ C +C +G G T C C++ G + V D C C+++ +GK C
Sbjct: 631 FK----C-FCSSGWEGELCDTNFNDCSPNPCHNGGRCIDLVNDFY---CECKNDWKGKTC 682
Query: 145 ERCLPGYYGDP---TDGGTCY 162
Y D ++GGTCY
Sbjct: 683 HS--REYQCDANTCSNGGTCY 701
Score = 103 (41.3 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 38/132 (28%), Positives = 53/132 (40%)
Query: 21 CTVLLLYIFNASLCYNKCIYGYCKG--PPDYSCQCELGWTGVDCSVN---CLCNNHSTCV 75
C L Y N C N G C P +Y C C G++G +C + C+ N C
Sbjct: 273 CNKDLNYCGNHHPCLNG---GTCMNTEPDEYRCACPDGYSGKNCEIAEHACVSN---PCA 326
Query: 76 HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-EC 133
+G G C H+ ++ C +C +G + T +C N G C D I EC
Sbjct: 327 NG-GTC---HEISSSFKC-HCPSG-WSGPTCAIDIDECASNPCAQG--GTCIDHINSFEC 378
Query: 134 ICQDNTQGKNCE 145
IC G C+
Sbjct: 379 ICPQQWIGATCQ 390
Score = 101 (40.6 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 40/143 (27%), Positives = 54/143 (37%)
Query: 30 NASLCYNK-CIYG-YCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHD 86
N + C K C G C D + C C GW G C N + + C +G C D
Sbjct: 609 NINDCLGKPCKNGGTCIDEVDSFKCFCSSGWEGELCDTNFNDCSPNPCHNG----GRCID 664
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC--DSITGECICQDNTQGKNC 144
+C+ C+ + T +CD N+ N G C D T C C G C
Sbjct: 665 LVNDFYCE-CK-NDWKGKTCHSREYQCDANTCSNG--GTCYDDGDTFRCSCPPEWIGSTC 720
Query: 145 E-----RCLPGYYGDPT-DGGTC 161
C+P +P +GGTC
Sbjct: 721 NIAKNSSCIP----NPCMNGGTC 739
Score = 88 (36.0 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 24/68 (35%), Positives = 31/68 (45%)
Query: 290 EGFNATYQIFSCPDKCPENRTC---INN-QCVCPPRRTGPDCQEEICPNECHE--FLNHG 343
+G N I C +C TC +N+ C+CP TG +C EI NEC N G
Sbjct: 423 KGVNCHININDCHGQCQHGGTCKDEVNDYHCICPRGFTGKNC--EIETNECESNPCQNGG 480
Query: 344 TCDLLLTG 351
C L+ G
Sbjct: 481 RCKDLVNG 488
Score = 77 (32.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 18/46 (39%), Positives = 21/46 (45%)
Query: 291 GFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEI 331
G + I C C TCI+ +C CPP R GP CQE I
Sbjct: 794 GPDCRINIDECQSSPCGYGATCIDEINGYRCTCPPGRVGPRCQEVI 839
Score = 70 (29.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 291 GFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECH--EFLNHG 343
G I C C + TCI++ +C+CP + G CQ + NEC +N
Sbjct: 348 GPTCAIDIDECASNPCAQGGTCIDHINSFECICPQQWIGATCQLDA--NECEGKPCVNAY 405
Query: 344 TCDLLLTGVH 353
+C L+ G +
Sbjct: 406 SCKNLIGGYY 415
Score = 68 (29.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 299 FSCP-DKCPENRTCINN----QCVCPPRRTGPDC---QEEIC-PNECHEFLNHGTC 345
+ C + C TC ++ +C CPP G C + C PN C +N GTC
Sbjct: 687 YQCDANTCSNGGTCYDDGDTFRCSCPPEWIGSTCNIAKNSSCIPNPC---MNGGTC 739
Score = 68 (29.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 22/73 (30%), Positives = 29/73 (39%)
Query: 290 EGFNATYQIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEF-LNHG 343
EG T C P C C++ +C C P GPDC+ I +EC +G
Sbjct: 755 EGRTCTQNTNDCNPHPCYNGGICVDGVNWFRCECAPGFAGPDCRINI--DECQSSPCGYG 812
Query: 344 -TCDLLLTGVHIT 355
TC + G T
Sbjct: 813 ATCIDEINGYRCT 825
Score = 63 (27.2 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 20/68 (29%), Positives = 27/68 (39%)
Query: 288 PSEGFNATYQIF---SC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--H 337
P E +T I SC P+ C TC+ + C+C G C + N+C H
Sbjct: 712 PPEWIGSTCNIAKNSSCIPNPCMNGGTCVGSGDSFSCICKEGWEGRTCTQNT--NDCNPH 769
Query: 338 EFLNHGTC 345
N G C
Sbjct: 770 PCYNGGIC 777
Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 305 CPENRTCINNQCVCPPRRTGPDCQEEICPNEC 336
C EN IN+ C+ P + G C +E+ +C
Sbjct: 606 CHEN---IND-CLGKPCKNGGTCIDEVDSFKC 633
Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 17/72 (23%), Positives = 26/72 (36%)
Query: 302 PDKCPENRTCIN--NQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRT 359
P+ C CI+ N C +C+ + CH CD ++G T
Sbjct: 653 PNPCHNGGRCIDLVNDFYC-------ECKNDWKGKTCHS--REYQCDANTC----SNGGT 699
Query: 360 LHYQVDLIRCTC 371
+ D RC+C
Sbjct: 700 CYDDGDTFRCSC 711
>UNIPROTKB|E2R3Q6 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005794 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
CTD:4917 KO:K06844 OMA:TASPLCW GeneTree:ENSGT00700000104042
EMBL:AAEX03004613 RefSeq:XP_537003.3 Ensembl:ENSCAFT00000030773
GeneID:479878 KEGG:cfa:479878 NextBio:20854992 Uniprot:E2R3Q6
Length = 577
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 79 GICDECHDWTTGDHCQYCRAGSY---GNATT-QEGCRKCDCNSHGNSVLGVCDSITGECI 134
G+C C T G HC YCR G Y G A + + CR CDC+ G + C+ TG+C
Sbjct: 336 GVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVG-AAGKTCNQTTGQCP 394
Query: 135 CQDNTQGKNCERCLPGY 151
C+D G C RC PG+
Sbjct: 395 CKDGVTGLTCNRCAPGF 411
>UNIPROTKB|G3N0E7 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 CTD:4917 KO:K06844 OMA:TASPLCW
GeneTree:ENSGT00700000104042 EMBL:DAAA02057314
RefSeq:NP_001193834.1 UniGene:Bt.111865 Ensembl:ENSBTAT00000063051
GeneID:787961 KEGG:bta:787961 NextBio:20928798 Uniprot:G3N0E7
Length = 580
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 79 GICDECHDWTTGDHCQYCRAGSY---GNATT-QEGCRKCDCNSHGNSVLGVCDSITGECI 134
G+C C T G HC YCR G Y G A + + CR CDC+ G + C+ TG+C
Sbjct: 336 GVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVG-AAGKTCNQTTGQCP 394
Query: 135 CQDNTQGKNCERCLPGY 151
C+D G C RC PG+
Sbjct: 395 CKDGVTGLTCNRCAPGF 411
>UNIPROTKB|F1SUI0 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
GeneTree:ENSGT00700000104042 OMA:RAHPASY EMBL:FP102361
RefSeq:XP_003354720.1 Ensembl:ENSSSCT00000008826 GeneID:100622906
KEGG:ssc:100622906 Uniprot:F1SUI0
Length = 580
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 79 GICDECHDWTTGDHCQYCRAGSY---GNATT-QEGCRKCDCNSHGNSVLGVCDSITGECI 134
G+C C T G HC YCR G Y G A + + CR CDC+ G + C+ TG+C
Sbjct: 336 GVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVG-AAGKTCNQTTGQCP 394
Query: 135 CQDNTQGKNCERCLPGY 151
C+D G C RC PG+
Sbjct: 395 CKDGVTGLTCNRCAPGF 411
>UNIPROTKB|A5A8X3 [details] [associations]
symbol:NOTCH4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0050793 "regulation of
developmental process" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0016021 GO:GO:0009986
GO:GO:0030154 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 GO:GO:0050793 GO:GO:0030879 Pfam:PF12661
GeneTree:ENSGT00690000101660 EMBL:AL773562 SUPFAM:SSF90193
HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599 CTD:4855
OMA:ACPQAHT OrthoDB:EOG437RD0 InterPro:IPR022355 PRINTS:PR01987
EMBL:CT954269 RefSeq:NP_001116619.1 UniGene:Ssc.19157
ProteinModelPortal:A5A8X3 SMR:A5A8X3 STRING:A5A8X3
Ensembl:ENSSSCT00000001593 GeneID:100144522 KEGG:ssc:100144522
ArrayExpress:A5A8X3 Uniprot:A5A8X3
Length = 1994
Score = 146 (56.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 46/147 (31%), Positives = 62/147 (42%)
Query: 38 CIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYC 96
C +G+C+ SC C++GWTG +C L ST C HG G C H G +C C
Sbjct: 665 CHHGHCQRS---SCVCDVGWTGPECDAE-LGGCISTPCAHG-GTC---HPQPFGYNCT-C 715
Query: 97 RAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYY 152
G G +E C C + G+ C G C C + G +C+ +
Sbjct: 716 PTGYTGPTCREEVTACHSAPCLNGGS-----CSPSPGGYSCTCPPSHTGLHCQTSIDHCA 770
Query: 153 GDPT-DGGTCYYQCMARGMLTGPGPQG 178
P +GGTC + A L PG QG
Sbjct: 771 SAPCLNGGTCVNRPGAPSCLCAPGFQG 797
Score = 134 (52.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 78/321 (24%), Positives = 110/321 (34%)
Query: 41 GYCKGPP-DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAG 99
G C+ + C C GW G DC N +TC G C D C C G
Sbjct: 328 GTCQNSAGSFHCVCVSGWGGTDCEENLDDCAAATCAPG----STCIDRVGSFSC-LCPPG 382
Query: 100 SYGNATTQEG-CRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNC----ERCLPGYY 152
G E C C HG + + +TG C+CQ G C + C
Sbjct: 383 RTGLLCHMEDMCLSQPC--HGEAQCST-NPLTGSTLCLCQPGYTGPTCHQDLDECQMAQQ 439
Query: 153 G-DPTD-GGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQSLDSN 210
G P + GG+C + L PG G P CL ++ +
Sbjct: 440 GPSPCEHGGSCLNTPGSFECLCPPGYTGSRCEADHNECLSQPCHPGSTCLDLLATF---H 496
Query: 211 STAPADII--LLRLQPD--INVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMH 266
P + L ++ D + PC N +D LP+ V Q G C ED++
Sbjct: 497 CLCPPGLEGRLCEVETDECASAPCL-NQADCHD-LPNGFRCVC---QPGFTGPRCEEDIN 551
Query: 267 RGYEVLEAKSGVM-----TIHYKQGKPSEGFNATYQIFSC-PDKCPENRTCINNQ----C 316
A G + H + EG ++ C CP +C++ C
Sbjct: 552 ECRSSPCANGGQCQDQPGSFHCECLPGFEGPRCQTEVDECLSSPCPSGASCLDLPGAFLC 611
Query: 317 VCPPRRTGPDCQEEIC-PNEC 336
+CP TG C+ +C PN C
Sbjct: 612 LCPSGFTGHLCESPLCAPNLC 632
Score = 134 (52.2 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 83/345 (24%), Positives = 124/345 (35%)
Query: 38 CIYG-YCKGPP-DYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDE--------CHDW 87
C +G C P Y+C C G+TG C + + C++G G C C
Sbjct: 698 CAHGGTCHPQPFGYNCTCPTGYTGPTCREEVTACHSAPCLNG-GSCSPSPGGYSCTCPPS 756
Query: 88 TTGDHCQ----YCRAG---SYGNATTQEGCRKCDC--NSHGNSVLG----VC-DS-ITGE 132
TG HCQ +C + + G + G C C G G C DS
Sbjct: 757 HTGLHCQTSIDHCASAPCLNGGTCVNRPGAPSCLCAPGFQGPRCEGRVRPSCADSPCRNR 816
Query: 133 CICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGK 192
CQD QG C C PGY GG+C Q + P P RN+ +
Sbjct: 817 ATCQDGPQGPRC-LCPPGY-----TGGSC--QTLMDFCAQKPCP---------RNSRCLQ 859
Query: 193 DTPSRECLWIIGQS--LDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGG 250
PS +CL + G + L + + L +++ C + + +G P +
Sbjct: 860 TGPSYQCLCLQGWTGPLCNLPLSSCQKAALSQGAEVSSLCQNGGICVDNG-PSYFCHCSP 918
Query: 251 THQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQG-----KPS-EGFNATYQIFSCPDK 304
Q G C + +H E + G + G P G N + + +C +
Sbjct: 919 GFQ----GSMCQDRVHP-CESRPCQHGATCVAQPNGYLCQCAPGYSGQNCSEEPDACQSQ 973
Query: 305 -CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGT 344
C + TC C CPP G C+ ++ +EC + H T
Sbjct: 974 PCHNHGTCTPKPGGFHCACPPGFVGLRCEGDV--DECLDRPCHPT 1016
Score = 124 (48.7 bits), Expect = 0.00061, P = 0.00061
Identities = 65/245 (26%), Positives = 86/245 (35%)
Query: 126 CDSITGECI----CQDNTQGKNCERCLPGYYGDPTDGGTCYYQ--CM-ARGMLTGPGPQG 178
C S G C C QG+ +C PG+ G+ TC + C A+ G Q
Sbjct: 27 CGSFPGPCANGGTCLSPPQGQGTCQCAPGFLGE-----TCQFPDPCQDAQLCQNGGSCQA 81
Query: 179 LGSGLAERNAWEGKDTPSRECLWIIGQSLDSNSTAPADIILLRLQPDINVPCNE-----N 233
L L + TPS C T P R Q + PC+
Sbjct: 82 LLPTLPGSTSPPSPLTPSFFC------------TCPFGFTGERCQAQVKDPCSSFCSKMG 129
Query: 234 AVYIY-DGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGF 292
+I G P G T + FC+ + V A + H G EG
Sbjct: 130 RCHIEASGRPRCTCMPGWTGEQCQHRDFCSANPCVNGGVCLATYPQIQCHCPPG--FEGH 187
Query: 293 NATYQIFSC---PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFLNHG 343
+ + C P CP+ +C N QC+CP R GP C E+ P C LN G
Sbjct: 188 TCEHDVNECFLNPGPCPKGTSCYNTLGSFQCLCPVGRDGPRC--ELQPGPCPPRGCLNGG 245
Query: 344 TCDLL 348
TC L+
Sbjct: 246 TCQLV 250
Score = 100 (40.3 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 35/116 (30%), Positives = 48/116 (41%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGC 110
C C GWTG C C+ + CV+G G+C + C +C G G+ T +
Sbjct: 141 CTCMPGWTGEQCQHRDFCSANP-CVNG-GVCLATYPQI---QC-HCPPGFEGH-TCEHDV 193
Query: 111 RKCDCNSHGNSVLGV-CDSITG--ECICQDNTQGKNCERCLPGYYGDP--TDGGTC 161
+C N G G C + G +C+C G CE PG +GGTC
Sbjct: 194 NECFLNP-GPCPKGTSCYNTLGSFQCLCPVGRDGPRCE-LQPGPCPPRGCLNGGTC 247
Score = 99 (39.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 40/140 (28%), Positives = 50/140 (35%)
Query: 51 CQCELGWTGVDCSVN---CL---CNNHSTCVHGIG----ICDECHD-WTTGDHCQYCRAG 99
C C G+TG C VN C+ C N C G+G +C E W + C A
Sbjct: 260 CLCPPGFTGASCEVNPDDCVGHQCQNGGICQDGLGTHTCLCPEAWTGWDCSEDVDECEAQ 319
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
C+ NS G S VC S G C++N C PG
Sbjct: 320 GVPRCRNGGTCQ----NSAG-SFHCVCVSGWGGTDCEENLDDCAAATCAPG--------S 366
Query: 160 TCYYQCMARGMLTGPGPQGL 179
TC + + L PG GL
Sbjct: 367 TCIDRVGSFSCLCPPGRTGL 386
Score = 90 (36.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 41/152 (26%), Positives = 61/152 (40%)
Query: 41 GYCK-GPPDYSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGD-HCQY 95
G C+ G ++C C WTG DCS + C C +G G C + G HC
Sbjct: 287 GICQDGLGTHTCLCPEAWTGWDCSEDVDECEAQGVPRCRNG-GTCQN----SAGSFHC-V 340
Query: 96 CRAGSYGNATTQEG---CRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC---ERCLP 149
C +G +G +E C C + G++ + S + C+C G C + CL
Sbjct: 341 CVSG-WGGTDCEENLDDCAAATC-APGSTCIDRVGSFS--CLCPPGRTGLLCHMEDMCLS 396
Query: 150 G-YYGD------PTDGGTCYYQCMARGMLTGP 174
+G+ P G T C+ + TGP
Sbjct: 397 QPCHGEAQCSTNPLTGSTL---CLCQPGYTGP 425
Score = 86 (35.3 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 25/76 (32%), Positives = 34/76 (44%)
Query: 289 SEGFNATY---QIFSCPDK-CPENRTCI---NNQ-CVCPPRRTGPDCQEE--ICPNE-CH 337
S GF + ++ C + C TC+ N C C P +G +C EE C ++ CH
Sbjct: 917 SPGFQGSMCQDRVHPCESRPCQHGATCVAQPNGYLCQCAPGYSGQNCSEEPDACQSQPCH 976
Query: 338 EFLNHGTCDLLLTGVH 353
NHGTC G H
Sbjct: 977 ---NHGTCTPKPGGFH 989
Score = 83 (34.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 25/74 (33%), Positives = 29/74 (39%)
Query: 305 CPENRTC----INNQCVCPPRRTGPDCQEEICPNECHEF--LNHGTCDLLLTGVHIT--H 356
C TC C CP TGP C+EE+ CH LN G+C G T
Sbjct: 698 CAHGGTCHPQPFGYNCTCPTGYTGPTCREEV--TACHSAPCLNGGSCSPSPGGYSCTCPP 755
Query: 357 GRT-LHYQVDLIRC 369
T LH Q + C
Sbjct: 756 SHTGLHCQTSIDHC 769
Score = 75 (31.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHEF--LNHGTC 345
+CVC P TGP C+E+I NEC N G C
Sbjct: 534 RCVCQPGFTGPRCEEDI--NECRSSPCANGGQC 564
Score = 74 (31.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 316 CVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTGVH 353
C+CPP TG C E+ P++C H+ N G C L G H
Sbjct: 260 CLCPPGFTGASC--EVNPDDCVGHQCQNGGICQDGL-GTH 296
Score = 68 (29.0 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 14/30 (46%), Positives = 14/30 (46%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C CPP TG CQ I LN GTC
Sbjct: 751 CTCPPSHTGLHCQTSIDHCASAPCLNGGTC 780
Score = 63 (27.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 22/74 (29%), Positives = 26/74 (35%)
Query: 303 DKCP-ENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLH 361
D C + C + CVC TGP+C E+ G C HG T H
Sbjct: 661 DNCTCHHGHCQRSSCVCDVGWTGPECDAEL-----------GGC----ISTPCAHGGTCH 705
Query: 362 YQVDLIRCTCRQVY 375
Q CTC Y
Sbjct: 706 PQPFGYNCTCPTGY 719
Score = 60 (26.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 17/58 (29%), Positives = 20/58 (34%)
Query: 302 PDKCPENRTCINN--------QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTG 351
P C N +C +C CPP GP CQ C G CD +G
Sbjct: 1135 PSPCLHNGSCSETPGLGGPGFRCSCPPSSPGPRCQRPGAKG-CEGRGGDGACDAGCSG 1191
Score = 56 (24.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
C C P TG C+ EI P + + G+C+
Sbjct: 1030 CQCLPGHTGQWCEVEIDPCQSQPCSHGGSCE 1060
Score = 56 (24.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 305 CPENRTCINNQ----CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C C++N C C P G CQ+ + P E + TC
Sbjct: 899 CQNGGICVDNGPSYFCHCSPGFQGSMCQDRVHPCESRPCQHGATC 943
Score = 51 (23.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 280 TIHYKQGKPSEGFNATYQIFSCP-DKCPENRTCINN-------QCVCPPRRTGPDCQEEI 331
T H QG EG +++ SC C C+ + +C C GPDC
Sbjct: 1070 TCHCPQG--FEGPTCSHRAPSCGLHHCHHGGLCLPSPKPGFPPRCACLNGYGGPDCLTPP 1127
Query: 332 CPNEC---HEFLNHGTC 345
P C L++G+C
Sbjct: 1128 TPPGCGPPSPCLHNGSC 1144
>UNIPROTKB|E1B7Q3 [details] [associations]
symbol:LAMC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008201 "heparin binding" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] GO:GO:0008201 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610
OMA:DRCLPCN EMBL:DAAA02043571 IPI:IPI00715486
Ensembl:ENSBTAT00000061289 ArrayExpress:E1B7Q3 Uniprot:E1B7Q3
Length = 1193
Score = 182 (69.1 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 41/126 (32%), Positives = 61/126 (48%)
Query: 47 PDYSCQ-CELGWTGV-----DCSVNCLCNNHSTC-----VHGIGICDECHDWTTGDHCQY 95
PD C+ C +G+ C C C N +C + +C+ C TG C+
Sbjct: 438 PDIECEDCPIGFYNDPHDPGSCKP-CPCRNGFSCSVMPETEEV-VCNNCPHGITGARCEL 495
Query: 96 CRAGSYGNATTQEG----CRKCDCNSHGN-SVLGVCDSITGECI-CQDNTQGKNCERCLP 149
C G +G+ + G C+ C C+ + + S G CD +TG C+ C NT G +C++C
Sbjct: 496 CADGYFGDPFGEHGPVRPCQPCQCSDNVDPSAPGNCDRLTGRCLKCLHNTTGAHCDQCKA 555
Query: 150 GYYGDP 155
GYYGDP
Sbjct: 556 GYYGDP 561
Score = 171 (65.3 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 39/103 (37%), Positives = 54/103 (52%)
Query: 61 DC---SVNCLCNNHSTCVHGIGI-CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
DC S C+ + + G G C C D T G HC+ C+ G Y + ++ C C+CN
Sbjct: 29 DCNGKSRQCIFDQELHRLTGNGFRCLHCSDNTGGIHCERCKEGFYRHRE-RDRCLPCNCN 87
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG 159
S G S+ CD+ TG C C+ G C+RCLPG++ TD G
Sbjct: 88 SKG-SLSPRCDN-TGRCSCKPGVTGDRCDRCLPGFH-TLTDAG 127
Score = 156 (60.0 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 41/121 (33%), Positives = 53/121 (43%)
Query: 61 DCSVNCLCNNHSTC---VHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCR------ 111
D + C CN+ + G C C TGD C C G + T GC
Sbjct: 79 DRCLPCNCNSKGSLSPRCDNTGRCS-CKPGVTGDRCDRCLPGFH--TLTDAGCTQDRKLL 135
Query: 112 --KCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGTCYYQCMAR 168
KCDC+ G ++G CD TG C+C+ G+ C+RC PGYY D + C QC
Sbjct: 136 DSKCDCDPAG--IVGPCD--TGRCVCKPAVTGERCDRCRPGYYHLDGRNPEGCT-QCFCY 190
Query: 169 G 169
G
Sbjct: 191 G 191
Score = 140 (54.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 31/87 (35%), Positives = 42/87 (48%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ---EGCRKCDCNSH 118
CS N + C G C +C TTG HC C+AG YG+ + CR C+CN
Sbjct: 519 CSDNVDPSAPGNCDRLTGRCLKCLHNTTGAHCDQCKAGYYGDPLAPNPADKCRACNCNPM 578
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCE 145
G+ + C S G C+C+ G NC+
Sbjct: 579 GSEPVE-CRS-DGSCVCKPGFDGLNCD 603
Score = 54 (24.1 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 305 CPENRTCINNQCVCPPRR-TGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGR 358
C ++R ++++C C P GP C C C + CD G + GR
Sbjct: 128 CTQDRKLLDSKCDCDPAGIVGP-CDTGRCV--CKPAVTGERCDRCRPGYYHLDGR 179
Score = 43 (20.2 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 315 QCVCPPRRTGPDCQE 329
QCVCP G C E
Sbjct: 381 QCVCPVGYKGQFCHE 395
Score = 43 (20.2 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 325 PDCQEEICPNECHEFLNHGTCDLLLTG 351
P+ +E +C N C + C+L G
Sbjct: 474 PETEEVVC-NNCPHGITGARCELCADG 499
Score = 38 (18.4 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 313 NNQCVCPPRRTGPDCQEEICPN 334
+ CVC P G +C N
Sbjct: 588 DGSCVCKPGFDGLNCDHAALTN 609
>UNIPROTKB|Q96GP6 [details] [associations]
symbol:SCARF2 "Scavenger receptor class F member 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005044 "scavenger receptor activity"
evidence=IEA] [GO:0007157 "heterophilic cell-cell adhesion"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 GO:GO:0016021
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 GO:GO:0007157
InterPro:IPR002049 Pfam:PF00053 EMBL:CH471176 InterPro:IPR009030
SUPFAM:SSF57184 GO:GO:0005044 EMBL:AC007731 EMBL:AB052951
EMBL:AF522196 EMBL:AB024433 EMBL:BC000584 EMBL:BC009326
IPI:IPI00305610 RefSeq:NP_699165.2 RefSeq:NP_878315.1
UniGene:Hs.474251 ProteinModelPortal:Q96GP6 SMR:Q96GP6
IntAct:Q96GP6 MINT:MINT-7240909 STRING:Q96GP6 PhosphoSite:Q96GP6
DMDM:47606791 PaxDb:Q96GP6 PRIDE:Q96GP6 DNASU:91179
Ensembl:ENST00000266214 Ensembl:ENST00000405555 GeneID:91179
KEGG:hsa:91179 CTD:91179 GeneCards:GC22M020778 H-InvDB:HIX0213276
HGNC:HGNC:19869 HPA:HPA035079 MIM:600920 MIM:613619
neXtProt:NX_Q96GP6 Orphanet:2460 PharmGKB:PA134908523
eggNOG:NOG284054 HOGENOM:HOG000015093 HOVERGEN:HBG023166
OMA:NVCRAPG PhylomeDB:Q96GP6 GenomeRNAi:91179 NextBio:77132
ArrayExpress:Q96GP6 Bgee:Q96GP6 CleanEx:HS_SCARF2
Genevestigator:Q96GP6 GermOnline:ENSG00000099910 Uniprot:Q96GP6
Length = 870
Score = 166 (63.5 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 41/126 (32%), Positives = 54/126 (42%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ-Y 95
+C +G C P +C+CE GW G C+ C C+ S C G C CH G C
Sbjct: 157 QCQHGTCH-PRSGACRCEPGWWGAQCASACYCSATSRCDPQTGAC-LCHAGWWGRSCNNQ 214
Query: 96 CRAGSYGNATTQEG---CRK----CDCNSHGNSVLGVCDSITGECICQDNTQGKNC-ERC 147
C S Q G CR+ C+ + G C + G C C+ +GK C E C
Sbjct: 215 CACNS-SPCEQQSGRCQCRERTFGARCDRYCQCFRGRCHPVDGTCACEPGYRGKYCREPC 273
Query: 148 LPGYYG 153
G+YG
Sbjct: 274 PAGFYG 279
Score = 148 (57.2 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 39/116 (33%), Positives = 50/116 (43%)
Query: 53 CELGWTGVDCSVNCL-CNNHSTCVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGC 110
C G+ G CS C C + C H G C C+ GD C+ C G+YG E C
Sbjct: 318 CATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIGDRCETKCSNGTYG-----EDC 372
Query: 111 R-KC-DCNSHGNSVLGVCDSITGECICQDNTQGKNCE-RCLPGYYG-DPTDGGTCY 162
C DC S G CD +G C+C G +C C PG +G D +C+
Sbjct: 373 AFVCADCGS------GHCDFQSGRCLCSPGVHGPHCNVTCPPGLHGADCAQACSCH 422
Score = 136 (52.9 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 47/163 (28%), Positives = 64/163 (39%)
Query: 34 CYN-KC--IYGYCKGPPDYS---CQ--CELGWTGVDCSVNC-LCNNHSTCVHGIGICDEC 84
C+ +C + G C P Y C+ C G+ G+ C C C C G C C
Sbjct: 246 CFRGRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTC 305
Query: 85 HDWTTGDHC-QYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCDSITGECI-CQDNTQG 141
G C Q C G YG EGC +C G++ C+ +TG+C C G
Sbjct: 306 EPGWNGTKCDQPCATGFYG-----EGCSHRCPPCRDGHA----CNHVTGKCTRCNAGWIG 356
Query: 142 KNCE-RCLPGYYGDP-----TDGGTCYYQCMARGMLTGPGPQG 178
CE +C G YG+ D G+ + + L PG G
Sbjct: 357 DRCETKCSNGTYGEDCAFVCADCGSGHCDFQSGRCLCSPGVHG 399
Score = 132 (51.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 39/141 (27%), Positives = 53/141 (37%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYC 96
+C +GY D C + W G DC C C+ H C G C CH G C++
Sbjct: 99 RCRHGYFGANCDTKCPRQF-W-GPDCKELCSCHPHGQCEDVTGQCT-CHARRWGARCEHA 155
Query: 97 RAGSYGNATTQEGCRKCD-------CNSHGN-SVLGVCDSITGECICQDNTQGKNCE-RC 147
+G + G +C+ C S S CD TG C+C G++C +C
Sbjct: 156 CQCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSRCDPQTGACLCHAGWWGRSCNNQC 215
Query: 148 LPGYYGDPTDGGTCYYQCMAR 168
G C QC R
Sbjct: 216 ACNSSPCEQQSGRC--QCRER 234
Score = 115 (45.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 34/122 (27%), Positives = 51/122 (41%)
Query: 43 CKGPPDYSCQCELGWT--GVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
C+ P C GW G +C + +C +STC +C G+ C+ CR G
Sbjct: 54 CRAPGSQVPTCCAGWRQQGDECGI-AVCEGNSTCSEN-EVCVR-----PGE-CR-CRHGY 104
Query: 101 YG-NATTQ-------EGCRK-CDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
+G N T+ C++ C C+ HG C+ +TG+C C G CE
Sbjct: 105 FGANCDTKCPRQFWGPDCKELCSCHPHGQ-----CEDVTGQCTCHARRWGARCEHACQCQ 159
Query: 152 YG 153
+G
Sbjct: 160 HG 161
Score = 56 (24.8 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 318 CPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHI 354
CPP G DC + C CHE TCD + H+
Sbjct: 406 CPPGLHGADCAQA-C--SCHE----DTCDPVTGACHL 435
Score = 53 (23.7 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 16/49 (32%), Positives = 19/49 (38%)
Query: 293 NATYQ---IFSCPDKCPENRTCINN-QCVCPPRRTGPDCQEEICPNECH 337
N TY F C D C + +C+C P GP C CP H
Sbjct: 365 NGTYGEDCAFVCAD-CGSGHCDFQSGRCLCSPGVHGPHCNVT-CPPGLH 411
Score = 53 (23.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 309 RTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
R+C NNQC C + P C+++ +C E CD
Sbjct: 209 RSC-NNQCAC---NSSP-CEQQSGRCQCRERTFGARCD 241
Score = 45 (20.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 312 INNQCVCPPRRTGPDCQEEICP 333
++ C C P G C+E CP
Sbjct: 254 VDGTCACEPGYRGKYCREP-CP 274
>UNIPROTKB|G3I6Z6 [details] [associations]
symbol:I79_019276 "Neurogenic locus notch-like protein 1"
species:10029 "Cricetulus griseus" [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 InterPro:IPR022362
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 GO:GO:0016021 GO:GO:0007275 GO:GO:0030154
GO:GO:0000139 GO:GO:0006355 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219
GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0005796 GO:GO:0050793
Pfam:PF12661 SUPFAM:SSF90193 InterPro:IPR024600 Pfam:PF11936
EMBL:JH001398 Uniprot:G3I6Z6
Length = 2412
Score = 152 (58.6 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 43/130 (33%), Positives = 56/130 (43%)
Query: 36 NKCIYGYCK-GPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ 94
N CI+G C+ G Y C C GW+G +C +N + CV+G G C D T+G C
Sbjct: 681 NPCIHGACRDGLNGYKCDCAPGWSGTNCDINNNECESNPCVNG-GTCK---DMTSGYVCT 736
Query: 95 YCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGYY 152
CR G + Q +C N N G C D + G +C C G CE L
Sbjct: 737 -CREG-FSGPNCQTNINECASNPCLNQ--GTCIDDVAGYKCNCPLPYTGATCEVVLAPCA 792
Query: 153 GDPT-DGGTC 161
P + G C
Sbjct: 793 TSPCKNSGVC 802
Score = 144 (55.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 50/152 (32%), Positives = 65/152 (42%)
Query: 36 NKCIYGYCKGPPD-YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC 93
N C G C D Y C CE G+TG C+VN C S C +G G C+ D G C
Sbjct: 606 NPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAG-SPCHNG-GTCE---DGIAGFTC 660
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCLPGY 151
+ C G Y + T +C+ N + G C D + G +C C G NC+
Sbjct: 661 R-CPEG-YHDPTCLSEVNECNSNP---CIHGACRDGLNGYKCDCAPGWSGTNCDINNNEC 715
Query: 152 YGDP-TDGGTCY-----YQCMARGMLTGPGPQ 177
+P +GGTC Y C R +GP Q
Sbjct: 716 ESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQ 747
Score = 137 (53.3 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 80/320 (25%), Positives = 119/320 (37%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+ C+C G TG+ C +N C ++ C G CD + G C +G G A +Q+
Sbjct: 315 FYCECPHGRTGLLCHLNDACISNP-CNEGSN-CDT--NPVNGKAICTCPSGYTGPACSQD 370
Query: 109 GCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPTDG-GTCYYQC 165
+C ++ G C + G EC C G CE + +P TC Q
Sbjct: 371 -VDECALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQI 429
Query: 166 MARGMLTGPGPQGLGSGLAERNAWEGKDTP---SRECLWIIGQSLDSNSTAPADIILLRL 222
+ PG +G+ E N E +P + C+ I + L P
Sbjct: 430 GEFQCICMPGYEGV---YCEINTDECASSPCLHNGHCMDKINEFL---CQCPKGFSGHLC 483
Query: 223 QPDIN----VPCNENAVYIYDGLPDFVTSV---G--GTHQSTTLGVFCTEDMHRGYEVLE 273
Q D++ PC +N DG P+ T V G GTH + + H G+
Sbjct: 484 QYDVDECASTPC-KNGAKCLDG-PNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGF---- 537
Query: 274 AKSGVMTIHYKQGKPSEGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQ 328
K GV T G + I C + C TC + C+C TGP+C+
Sbjct: 538 CKDGVATFTCLCQPGYTGHHCETNINECHSQPCRHGGTCQDRDNSYLCLCLKGTTGPNCE 597
Query: 329 ---EEICPNECHEFLNHGTC 345
++ N C + GTC
Sbjct: 598 INLDDCASNPC----DSGTC 613
Score = 136 (52.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 46/151 (30%), Positives = 57/151 (37%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KC+ GP Y+C C G+TG C V+ + C +G C D
Sbjct: 495 CKNGAKCL----DGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGF-----CKDGVATF 545
Query: 92 HCQYCRAGSYGN--ATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERC 147
C C+ G G+ T C C HG G C C+C T G NCE
Sbjct: 546 TC-LCQPGYTGHHCETNINECHSQPCR-HG----GTCQDRDNSYLCLCLKGTTGPNCEIN 599
Query: 148 LPGYYGDPTDGGTCY-----YQCMARGMLTG 173
L +P D GTC Y+C TG
Sbjct: 600 LDDCASNPCDSGTCLDKIDGYECACEPGYTG 630
Score = 135 (52.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 92/365 (25%), Positives = 129/365 (35%)
Query: 21 CTVLLLYIFNASLCYNKCIYGYCKGPPDY---SCQCELGWTGVDCSVNCLCNNHSTCVHG 77
C V+L S C N G CK DY SC C GW G C ++ S C HG
Sbjct: 784 CEVVLAPCAT-SPCKNS---GVCKESEDYESFSCVCPTGWQGQTCEIDINECVKSPCRHG 839
Query: 78 IGICDECHDWTTGDHCQYCRAGSYG-NATTQ-EGCRKCDCNSHGNSVLGVCDSITGECIC 135
C + T G + C+AG G N + + CR C++ G+ G+ + C C
Sbjct: 840 AS----CQN-TNGSYRCLCQAGYTGRNCESDIDDCRPNPCHNGGSCTDGINMAF---CDC 891
Query: 136 QDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTP 195
QG CE + +P G C+ T P G E N D
Sbjct: 892 LPGFQGAFCEEDINECASNPCRNGANCTDCVDSYTCTCPA--GFNGIHCENNT---PDCT 946
Query: 196 SRECLWIIGQSLDS-NS---TAPADIILLRLQPDINVPCNENAVYIYDGL-PDFVTSVGG 250
C + G +D NS P Q D+N C+ ++ G D +
Sbjct: 947 ESSC-FNGGTCVDGINSFTCLCPPGFTGSYCQYDVN-ECDSRPC-LHGGTCQDSYGTYKC 1003
Query: 251 THQSTTLGVFCTEDMHRGYEVLEAKSG-----VMTIHYKQGKPS-EGFNATYQIFSCP-- 302
T G+ C +H + K+G T ++ + + GFN SC
Sbjct: 1004 TCPQGYTGLNCQNLVH-WCDSAPCKNGGKCWQTNTQYHCECRSGWTGFNCDVLSVSCEVA 1062
Query: 303 -DK--------CPENRTCINNQ----CVCPPRRTGPDCQEEI--C-PNECHEFLNHGTCD 346
K C C++ + C C TG C++E+ C PN C N TC
Sbjct: 1063 AQKRGIDVTLLCQHGGLCVDEEDKHYCHCQAGYTGSYCEDEVDECSPNPCQ---NGATCT 1119
Query: 347 LLLTG 351
L G
Sbjct: 1120 DYLGG 1124
Score = 132 (51.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 77/302 (25%), Positives = 103/302 (34%)
Query: 49 YSCQCELGWTGVDC---SVNCLCNNHST-------CVHGIGICDECHDWTTGDHCQYCRA 98
Y C+C GWTG +C SV+C C HG G+C + D H +C+A
Sbjct: 1039 YHCECRSGWTGFNCDVLSVSCEVAAQKRGIDVTLLCQHG-GLCVDEED----KHYCHCQA 1093
Query: 99 GSYGNATTQEGCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDPT 156
G Y + ++ +C N N C G C C G NC + P
Sbjct: 1094 G-YTGSYCEDEVDECSPNPCQNGA--TCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPC 1150
Query: 157 -DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSR--ECL---WIIGQSLDSN 210
+GGTC G QG+ + + D SR +C + Q +
Sbjct: 1151 QNGGTCIDLTNTYKCSCPRGTQGVHCEINVDDCHPHLDPASRSPKCFNNGTCVDQVGGYS 1210
Query: 211 STAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGTHQSTTLGVFCTEDMHRGYE 270
T P + R + DIN C N G D V V H G H G
Sbjct: 1211 CTCPPGFVGERCEGDIN-ECLSNPCDPR-GTQDCVQRVNDFHCECRAG-------HTGRR 1261
Query: 271 VLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKCP---ENRTCINNQCVCPPRR--TGP 325
+G K G + T + F C +CP E TC N+ C R G
Sbjct: 1262 CESVINGCRGKPCKNGGVCAVASNTARGFIC--RCPAGFEGATCENDARTCGSLRCLNGG 1319
Query: 326 DC 327
C
Sbjct: 1320 TC 1321
Score = 126 (49.4 bits), Expect = 0.00045, P = 0.00045
Identities = 92/378 (24%), Positives = 143/378 (37%)
Query: 36 NKCIYG-YC-KGPPDYSCQCELGWTGVDCSVN---C-----LCNNHSTC--VHGIGICDE 83
N C G C G Y+C+C WTG C+ + C C N TC HG C
Sbjct: 222 NNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNTHGGYNCVC 281
Query: 84 CHDWTTGDHCQY----CR-AGSYGNATTQEGCRK--CDCNSHGNSVLGVCDSITGECICQ 136
+ WT G+ C C A + AT + C+C HG + L +C + CI
Sbjct: 282 VNGWT-GEDCSENIDDCASAACFQGATCHDRVASFYCEC-PHGRTGL-LCH-LNDACISN 337
Query: 137 DNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPG-PQGLGSGLAERNAWEGKDTP 195
+G NC+ +P +G C TGP Q + N E
Sbjct: 338 PCNEGSNCDT-------NPVNGKAI---CTCPSGYTGPACSQDVDECALGANPCEH---- 383
Query: 196 SRECLWIIG----QSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVGGT 251
+ +CL +G Q L + +I + I+ PC +A + D + +F
Sbjct: 384 AGKCLNTLGSFECQCLQGYTGPRCEI---DVNECISNPCQNDATCL-DQIGEFQCICMPG 439
Query: 252 HQSTTLGVFC---TED------MHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCP 302
++ GV+C T++ +H G+ ++ K +G G Y + C
Sbjct: 440 YE----GVYCEINTDECASSPCLHNGH-CMD-KINEFLCQCPKG--FSGHLCQYDVDECA 491
Query: 303 DK-CPENRTCINNQ----CVCPPRRTGPDCQEEI--C-PNECHEFLNHGTC-DLLLTGVH 353
C C++ CVC TG C+ +I C P+ CH +G C D + T
Sbjct: 492 STPCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCH----YGFCKDGVATFTC 547
Query: 354 ITH-GRTLHY-QVDLIRC 369
+ G T H+ + ++ C
Sbjct: 548 LCQPGYTGHHCETNINEC 565
Score = 109 (43.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 44/154 (28%), Positives = 65/154 (42%)
Query: 29 FNASLCY----NKCIYGYCK--GPPD------YSCQCELGWTGVDCSVNCLCNNHSTCVH 76
F+ LC N C+ C+ G D Y C+C GW+G C C ++ C +
Sbjct: 51 FSGPLCLTPLDNACLANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADPCASNP-CAN 109
Query: 77 GIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNS----HGNSVLGVCDSITGE 132
G G +C + + C C G +G T ++ +C N HG G C + G
Sbjct: 110 G-G---QCLPFESSYICG-CPPGFHG-PTCRQDVNECSQNPGLCRHG----GTCHNEIGS 159
Query: 133 --CICQDNTQGKNCERCLPGYYGDPT---DGGTC 161
C+C+ G +CE LP P+ +GGTC
Sbjct: 160 YRCVCRATHTGPHCE--LPYVPCSPSPCQNGGTC 191
Score = 104 (41.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 43/143 (30%), Positives = 59/143 (41%)
Query: 45 GPPDYSCQCELGWTGVDCSV---N-CLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGS 100
G +Y+C C LG++G C N CL N C +G G CD T C+ C G
Sbjct: 39 GTVNYACSCPLGFSGPLCLTPLDNACLAN---PCRNG-GTCDLLT--LTEYKCR-CPPGW 91
Query: 101 YGNATTQ-EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP---T 156
G + Q + C C ++G L S C C G C + + +P
Sbjct: 92 SGKSCQQADPCASNPC-ANGGQCLPFESSYI--CGCPPGFHGPTCRQDVNECSQNPGLCR 148
Query: 157 DGGTCY-----YQCMARGMLTGP 174
GGTC+ Y+C+ R TGP
Sbjct: 149 HGGTCHNEIGSYRCVCRATHTGP 171
Score = 97 (39.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 39/133 (29%), Positives = 48/133 (36%)
Query: 36 NKCIYG-YCKG-PPDYSCQCELGWTGVDC--SVNCLCNNHSTCVHGIGICDECHDWTTGD 91
N C G C Y C C G+ G C VN N C HG CH+
Sbjct: 105 NPCANGGQCLPFESSYICGCPPGFHGPTCRQDVNECSQNPGLCRHG----GTCHNEIGSY 160
Query: 92 HCQYCRAGSYGN--ATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLP 149
C CRA G C C + G + D+ T EC C G+NCE +
Sbjct: 161 RC-VCRATHTGPHCELPYVPCSPSPCQN-GGTCRPTGDT-THECACLPGFAGQNCEENVD 217
Query: 150 GYYGDPT-DGGTC 161
G+ +GG C
Sbjct: 218 DCPGNNCKNGGAC 230
Score = 89 (36.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 26/77 (33%), Positives = 32/77 (41%)
Query: 291 GFNATYQIFSCP-DKCPENRTCINN----QCVCPPRRTGPDCQEEI--C---PNECHEFL 340
G N + CP + C C++ C CPP TG C E++ C PN C
Sbjct: 209 GQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQ--- 265
Query: 341 NHGTCDLLLTGVHITHG 357
N GTC H THG
Sbjct: 266 NGGTC-------HNTHG 275
Score = 81 (33.6 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 36/130 (27%), Positives = 50/130 (38%)
Query: 258 GVFCTEDMHRGYEVLEAKSGVMTIH----YKQGKPSEGFNATYQIFSCPD----KCPENR 309
G FC ED++ ++G Y P+ GFN + + PD C
Sbjct: 897 GAFCEEDINECASN-PCRNGANCTDCVDSYTCTCPA-GFNGIHCENNTPDCTESSCFNGG 954
Query: 310 TCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLLLTGVHITHGRTLHYQVD 365
TC++ C+CPP TG CQ ++ NEC + C HG T
Sbjct: 955 TCVDGINSFTCLCPPGFTGSYCQYDV--NEC----DSRPC---------LHGGTCQDSYG 999
Query: 366 LIRCTCRQVY 375
+CTC Q Y
Sbjct: 1000 TYKCTCPQGY 1009
Score = 72 (30.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 24/71 (33%), Positives = 31/71 (43%)
Query: 291 GFNATY---QIFSC-PDKCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC--HEFL 340
G+ +Y ++ C P+ C TC + C C G +C EEI NEC
Sbjct: 1094 GYTGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEI--NECLSQPCQ 1151
Query: 341 NHGTC-DLLLT 350
N GTC DL T
Sbjct: 1152 NGGTCIDLTNT 1162
Score = 71 (30.1 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 304 KCPENRTCINN----QCVCPPRRTGPDCQEEICPNEC 336
KC N TC++ C CPP G C+ +I NEC
Sbjct: 1195 KCFNNGTCVDQVGGYSCTCPPGFVGERCEGDI--NEC 1229
Score = 69 (29.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 302 PDKCPENRTC-----INNQCVCPPRRTGPDCQEEI--CP-NECHEFLNHGTC 345
P C TC ++C C P G +C+E + CP N C N G C
Sbjct: 182 PSPCQNGGTCRPTGDTTHECACLPGFAGQNCEENVDDCPGNNCK---NGGAC 230
Score = 66 (28.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 21/67 (31%), Positives = 28/67 (41%)
Query: 290 EGFNATYQIFSCPD-KCPENRTCINNQ----CVCPPRRTGPDCQ---EEIC--PNECHEF 339
EG +C +C TCI+ C+C TGP+CQ C N C+
Sbjct: 1299 EGATCENDARTCGSLRCLNGGTCISGPRSPTCLCLGSFTGPECQFPASSPCVGSNPCY-- 1356
Query: 340 LNHGTCD 346
N GTC+
Sbjct: 1357 -NQGTCE 1362
Score = 66 (28.3 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 20/64 (31%), Positives = 25/64 (39%)
Query: 290 EGF---NATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLN 341
EGF N I C C TCI++ +C CP TG C+ + P N
Sbjct: 739 EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCATSPCKN 798
Query: 342 HGTC 345
G C
Sbjct: 799 SGVC 802
Score = 58 (25.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 315 QCVCPPRRTGPDCQEEICPNECHE--FLNHGTCDLLLTG 351
+C C P +G +C +I NEC +N GTC + +G
Sbjct: 696 KCDCAPGWSGTNC--DINNNECESNPCVNGGTCKDMTSG 732
Score = 53 (23.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/46 (32%), Positives = 18/46 (39%)
Query: 305 CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEF-LNHGTC 345
C TC + C CP P C E+ NEC+ HG C
Sbjct: 645 CHNGGTCEDGIAGFTCRCPEGYHDPTCLSEV--NECNSNPCIHGAC 688
Score = 46 (21.3 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 25/86 (29%), Positives = 31/86 (36%)
Query: 249 GGTHQSTTLGVFCT--EDMHRGY---EVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPD 303
GGT + G C E H EV E S IH G +G N Y+ P
Sbjct: 648 GGTCEDGIAGFTCRCPEGYHDPTCLSEVNECNSNPC-IH---GACRDGLNG-YKCDCAPG 702
Query: 304 KCPENRTCINNQCVCPPRRTGPDCQE 329
N NN+C P G C++
Sbjct: 703 WSGTNCDINNNECESNPCVNGGTCKD 728
Score = 44 (20.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
C CP G C+ + LN GTC
Sbjct: 1292 CRCPAGFEGATCENDARTCGSLRCLNGGTC 1321
Score = 39 (18.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 325 PDCQEEICPNECHEFLNHGTC 345
P+CQE+ C+ N+ C
Sbjct: 1410 PECQEDAGNKVCNLQCNNHAC 1430
>UNIPROTKB|E1C414 [details] [associations]
symbol:ODZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007165 "signal transduction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 GO:GO:0016021 GO:GO:0007165 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 Pfam:PF12661
GeneTree:ENSGT00660000095277 EMBL:AADN02035907 EMBL:AADN02035908
EMBL:AADN02035909 EMBL:AADN02035910 EMBL:AADN02035911
EMBL:AADN02035912 EMBL:AADN02035913 EMBL:AADN02035914
EMBL:AADN02035915 EMBL:AADN02035916 IPI:IPI00971442
Ensembl:ENSGALT00000029075 ArrayExpress:E1C414 Uniprot:E1C414
Length = 831
Score = 119 (46.9 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 35/126 (27%), Positives = 51/126 (40%)
Query: 29 FNASLCYNKCIYGYCKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIG 79
F+ + C C G YS C C GW G +C V C+ C H +C+ G
Sbjct: 597 FHGADCAKAACPVLCSGNGQYSKGTCLCYSGWKGPECDVPISQCIDPSCGGHGSCIEGNC 656
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
+C + G++C+ + C C++HG VC + GEC+C
Sbjct: 657 VCSIGYK---GENCE------------EVDCLDPTCSNHG-----VC--VNGECLCSPGW 694
Query: 140 QGKNCE 145
G NCE
Sbjct: 695 GGINCE 700
Score = 106 (42.4 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 30/94 (31%), Positives = 41/94 (43%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNEC--HEFLNHGTC- 345
G N CPD+C + T +++ C C P GPDC E+C +C H G C
Sbjct: 696 GINCELPRAQCPDQCSGHGTYLSDTGLCSCDPNWMGPDCSVEVCSVDCGTHGVCIGGACR 755
Query: 346 -DLLLTGV----HITHGR-TLHYQVDLIRCTCRQ 373
+ TGV + H R T H +C CR+
Sbjct: 756 CEEGWTGVACDQRVCHPRCTEHGTCKDGKCECRE 789
Score = 74 (31.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 40/141 (28%), Positives = 51/141 (36%)
Query: 61 DCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQ------YCRA-GSYGNATT--QEGCR 111
DC NC + + CV G+ C C G C C G Y T G +
Sbjct: 575 DCPRNC--HGNGECVSGV--C-HCFPGFHGADCAKAACPVLCSGNGQYSKGTCLCYSGWK 629
Query: 112 --KCD-----CNSHGNSVLGVCDSITGECICQDNTQGKNCER--CLPGYYGDPTDGGTCY 162
+CD C G C I G C+C +G+NCE CL DPT +
Sbjct: 630 GPECDVPISQCIDPSCGGHGSC--IEGNCVCSIGYKGENCEEVDCL-----DPTCSN--H 680
Query: 163 YQCMARGMLTGPGPQGLGSGL 183
C+ L PG G+ L
Sbjct: 681 GVCVNGECLCSPGWGGINCEL 701
>UNIPROTKB|E1BP05 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060171 "stereocilium membrane" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0035315 "hair cell differentiation" evidence=IEA] [GO:0017022
"myosin binding" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0002142 "stereocilia ankle link complex"
evidence=IEA] InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0005604 GO:GO:0060113 Pfam:PF02210 GO:GO:0032421
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0002142 GO:GO:0048496 GeneTree:ENSGT00700000104042
InterPro:IPR006558 SMART:SM00560 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:DAAA02042466 EMBL:DAAA02042467
EMBL:DAAA02042468 EMBL:DAAA02042469 EMBL:DAAA02042470
EMBL:DAAA02042471 EMBL:DAAA02042472 EMBL:DAAA02042473
EMBL:DAAA02042474 EMBL:DAAA02042475 EMBL:DAAA02042476
EMBL:DAAA02042477 EMBL:DAAA02042478 EMBL:DAAA02042479
EMBL:DAAA02042480 EMBL:DAAA02042481 EMBL:DAAA02042482
EMBL:DAAA02042483 IPI:IPI00924139 Ensembl:ENSBTAT00000061112
Uniprot:E1BP05
Length = 5204
Score = 185 (70.2 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 47/125 (37%), Positives = 59/125 (47%)
Query: 51 CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGC 110
CQC L G SVN LCN S G C EC G C CR YG T GC
Sbjct: 747 CQCNLH--G---SVNRLCNPLS------GQC-ECKKEAKGLQCDTCREHFYGLDAT--GC 792
Query: 111 RKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGG-TCY-YQCMAR 168
+ CDC+ G+ VCD+ TG+C+C+ N G+ C C+ GY+ P + C C
Sbjct: 793 KACDCDVAGSRPGTVCDAWTGQCVCKPNVGGRRCSECVEGYFYQPQNRSFLCLPCNCDRT 852
Query: 169 GMLTG 173
G + G
Sbjct: 853 GTVNG 857
Score = 183 (69.5 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY 95
++C+ GY P + S C +C N C G C C TG HC
Sbjct: 827 SECVEGYFYQPQNRSFLC----LPCNCDRTGTVNGSLLCDKSTGQCP-CKLGVTGLHCNQ 881
Query: 96 CRAGSYG-NATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGD 154
C + Y + +GC+ C+C+ G +CD ++G+C C N QG+ C +C PG+Y
Sbjct: 882 CESHRYHLTVGSFQGCQMCECDPLGTLPGTICDPLSGQCPCLPNRQGRRCNQCQPGFYIS 941
Query: 155 PTDGGTC 161
P + C
Sbjct: 942 PGNATGC 948
Score = 159 (61.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 54/187 (28%), Positives = 74/187 (39%)
Query: 5 FRISGLTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYS---C-QCELG---- 56
FR G + D C + N+S ++ I G C S C QC+ G
Sbjct: 625 FRQVGADPSAIDVCRPCDCDKVGTRNSSFLCDQ-IGGQCNCKRHVSGRQCNQCQNGFYNL 683
Query: 57 --WTGVDCSVNCLCNNHST------CVHGIGICDECHDWTTGDHCQYCRAG-SYGNATTQ 107
W CS C CN T C G C +C G C +C G + +
Sbjct: 684 QEWDPDGCSP-CNCNTSGTVDGDITCHPNSGQC-KCKANVIGLRCDHCNFGFKFLQSFND 741
Query: 108 EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGTCYYQCM 166
+GC C CN HG SV +C+ ++G+C C+ +G C+ C +YG D T C C
Sbjct: 742 DGCEPCQCNLHG-SVNRLCNPLSGQCECKKEAKGLQCDTCREHFYGLDATGCKAC--DCD 798
Query: 167 ARGMLTG 173
G G
Sbjct: 799 VAGSRPG 805
Score = 158 (60.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 34/107 (31%), Positives = 52/107 (48%)
Query: 77 GIGICDECHDWTTGDHCQYCRAGSY----GNATTQEGCRKCDCNSHG--NSVLGVCDSIT 130
G G+CD+C T G +C+ C+ + + + + CR CDC+ G NS +CD I
Sbjct: 601 GGGVCDDCEHNTAGKNCELCKDYFFRQVGADPSAIDVCRPCDCDKVGTRNSSF-LCDQIG 659
Query: 131 GECICQDNTQGKNCERCLPGYYG----DPTDGGTCYYQCMARGMLTG 173
G+C C+ + G+ C +C G+Y DP C C G + G
Sbjct: 660 GQCNCKRHVSGRQCNQCQNGFYNLQEWDPDGCSPC--NCNTSGTVDG 704
Score = 151 (58.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 36/98 (36%), Positives = 51/98 (52%)
Query: 79 GICDECHDWTTGDHCQYCRAGSY---GNATTQEGCRKCDCNSHGNSVLGVCDSITGECIC 135
G C C G C C+ G Y GNAT GC C C++ G +V +C+S+TG+C+C
Sbjct: 918 GQCP-CLPNRQGRRCNQCQPGFYISPGNAT---GCLPCSCHTTG-AVNHICNSLTGQCVC 972
Query: 136 QD-NTQGKNCERCLPGYYGDPTDGGTCY-YQCMARGML 171
QD + G++C+ C Y+G + G C C G L
Sbjct: 973 QDASIAGQSCDYCKDLYFGFDSLTGRCQPCNCHLSGAL 1010
Score = 136 (52.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 42/165 (25%), Positives = 75/165 (45%)
Query: 36 NKCIYGYCKGPPDYS-C-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
N+C G+ P + + C C TG +VN +CN+ + G +C + G C
Sbjct: 932 NQCQPGFYISPGNATGCLPCSCHTTG---AVNHICNS----LTGQCVCQDAS--IAGQSC 982
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGY-Y 152
YC+ +G + C+ C+C+ G ++ C +TG+C C+ G C+ C+P +
Sbjct: 983 DYCKDLYFGFDSLTGRCQPCNCHLSG-ALNETCHLVTGQCFCKRFVTGSKCDTCVPNASH 1041
Query: 153 GDPTDGGTCYYQCMARGMLTGPGPQG-LGSGLAERNAWEGKDTPS 196
D ++ C ++ P P+G + S A +W D+P+
Sbjct: 1042 LDISNPLGC-----SKTPSQQPPPRGQVQSSSAINLSWSPPDSPN 1081
Score = 52 (23.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 308 NRTC--INNQCVCPPRRTGPDCQEEICPNECH 337
N TC + QC C TG C + PN H
Sbjct: 1011 NETCHLVTGQCFCKRFVTGSKC-DTCVPNASH 1041
Score = 47 (21.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 312 INNQCVCPPRRTGPDCQEEICPNECHE--FLNHGTCD-LLLTGVHITHGRTLHYQVDLI- 367
++ QC C P R G C N+C +++ G L H T G H L
Sbjct: 916 LSGQCPCLPNRQGRRC------NQCQPGFYISPGNATGCLPCSCHTT-GAVNHICNSLTG 968
Query: 368 RCTCR 372
+C C+
Sbjct: 969 QCVCQ 973
Score = 44 (20.5 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 20/88 (22%), Positives = 33/88 (37%)
Query: 277 GVMTIHYKQGKPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNEC 336
G + Q KP + Q + + T I V P ++ P + ++ P
Sbjct: 4592 GPQSFMVNQLKPFHRYEVRIQACTRLGCVSSDWTFIETLEVAPQQQPPPHLEVQMAPGGF 4651
Query: 337 HEFLNHGTCDLLLTGVHITHGRTLHYQV 364
T LL TG +GR L+Y++
Sbjct: 4652 QP-----TVSLLWTGPLQPNGRVLYYEL 4674
Score = 44 (20.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 315 QCVCPPRRTGPDCQE 329
QCVC P G C E
Sbjct: 814 QCVCKPNVGGRRCSE 828
Score = 39 (18.8 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 157 DGGTCYYQCMARGMLTGPGPQGLGS 181
+GG+ + +RG TG PQ + S
Sbjct: 1936 EGGSVHSD-WSRGRTTGAAPQSVPS 1959
Score = 38 (18.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 320 PRRTGPDCQEEICPNECH 337
PRR GP +I E H
Sbjct: 1243 PRRLGPPKVRKISSTELH 1260
>UNIPROTKB|F1NK85 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI00819575 Ensembl:ENSGALT00000039263 Uniprot:F1NK85
Length = 330
Score = 169 (64.5 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 39/127 (30%), Positives = 54/127 (42%)
Query: 50 SCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNA----T 105
+C C L C N S G G+C C T G HC YC+ G Y + T
Sbjct: 69 ACNCNLH--ARRCRFNMELYKLSGRKSG-GVCLNCRHNTAGRHCHYCKEGFYRDLSKSIT 125
Query: 106 TQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQC 165
++ C+ CDC+ G + C+ TG+C C+D G C RC G+ + C +
Sbjct: 126 DRKACKACDCHPVG-AAGKTCNQTTGQCPCKDGVTGLTCNRCAKGFQQSRSPVAPCISES 184
Query: 166 MARGMLT 172
AR T
Sbjct: 185 CARTTCT 191
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 38/120 (31%), Positives = 49/120 (40%)
Query: 66 CLCNNH-STCVHGIG---ICDECHDWTTGDHCQYCRAGSYGN----ATTQEG--CRKCDC 115
C CN H S CV +CD C T G C C+ Y A+ +E C C+C
Sbjct: 14 CKCNGHASRCVKDKEQKLVCD-CKHNTEGPECDRCKPFHYDRPWQRASAREANECLACNC 72
Query: 116 NSHG-----NSVLGVCDSIT--GECI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMA 167
N H N L G C+ C+ NT G++C C G+Y D + T C A
Sbjct: 73 NLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKA 132
>UNIPROTKB|E1BYW1 [details] [associations]
symbol:Gga.53999 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 Pfam:PF12661 GeneTree:ENSGT00700000104308
EMBL:AADN02026348 IPI:IPI00819589 ProteinModelPortal:E1BYW1
Ensembl:ENSGALT00000038754 OMA:ENIDECQ Uniprot:E1BYW1
Length = 1384
Score = 145 (56.1 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 49/161 (30%), Positives = 66/161 (40%)
Query: 30 NASLCYNKCIYGYC-------KGP--PDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGI 80
N L Y+ C C K P P+Y C C G+TG+DCS+N + C
Sbjct: 55 NCELLYDACTKHDCPAHMICNKTPGLPEYECICMPGFTGIDCSININECESNPCKDPRF- 113
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDN 138
EC D +G C+ C+ G G EGC+ C+SH G C G+ CICQ
Sbjct: 114 --ECVDSVSGYACK-CQTGLNG-----EGCQNSVCSSHLCLNNGTCVEGPGDYACICQPG 165
Query: 139 TQGKNCERCLPGYYGDPTDGGT-CYYQCMARGMLTGPGPQG 178
G +C+ + +P G C + PG QG
Sbjct: 166 FTGAHCKDNIDECASNPCQNGAICRDRVNEYSCFCVPGFQG 206
Score = 83 (34.3 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 24/68 (35%), Positives = 32/68 (47%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTG-PDCQEEICPNEC--HEFLN 341
+G+N I C + C N TC+N C C P TG Q E+ NEC +
Sbjct: 205 QGYNCEIDINECASRPCKNNGTCLNEMDHYLCKCIPGYTGYQGIQCEVDINECISQPCQH 264
Query: 342 HGTC-DLL 348
+GTC DL+
Sbjct: 265 NGTCHDLI 272
Score = 80 (33.2 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCI----NNQCVCPPRRTGPDCQEEI--CPNE-CHEFLN 341
EG + I C + C N TC+ N C C TG C+E++ C + CH N
Sbjct: 289 EGDHCELDILECASEPCLNNATCVEGIKNYSCACWTGYTGQHCEEDVNECATDPCH---N 345
Query: 342 HGTC 345
G C
Sbjct: 346 GGVC 349
Score = 56 (24.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 304 KCPENRTCINN----QCVCPPRRTGPDCQEEICPNECHE 338
+C TCI+ C CP + +GP C + C +
Sbjct: 1283 QCQNGATCIDGVYGYSCKCPAQYSGPRCDYRARISNCEK 1321
Score = 54 (24.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 303 DKCPENRTCI---NN-QCVCPPRRTGPDCQEEI-CPNE-CHE 338
+ C CI N+ C CP TG C+E + C ++ C E
Sbjct: 968 EPCQNGGRCIVTWNDFHCSCPANFTGKFCEERVWCESDPCPE 1009
Score = 45 (20.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 309 RTCINN-QCVCPPRRTGPDCQEEICPNECH 337
RT I+ QC P + G C++ I CH
Sbjct: 468 RTAISLVQCEEGPCKNGAVCEDGIADYTCH 497
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 303 DKCPENRTCIN 313
D CPE TCI+
Sbjct: 1005 DPCPEATTCID 1015
Score = 41 (19.5 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 9/29 (31%), Positives = 10/29 (34%)
Query: 303 DKCPENRTCINN----QCVCPPRRTGPDC 327
D C C C C P TG +C
Sbjct: 1356 DPCQNGGKCTTETWGANCTCKPGFTGRNC 1384
Score = 41 (19.5 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 13/54 (24%), Positives = 20/54 (37%)
Query: 307 ENRTCINN--QCVCPPRRTGPDCQEEICPNECHEFLNHGT--CDLLLTGVHITH 356
+ TC N +C P + G C + + CH + C+ L TH
Sbjct: 400 KGETCFTNINECESQPCQNGGHCVDLVDGFLCHCLPGYSGYYCNALRESTASTH 453
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
QC C G C +I ++C H+ N TC
Sbjct: 1260 QCECFRGYIGKKC--DINVDDCVRHQCQNGATC 1290
>UNIPROTKB|Q04721 [details] [associations]
symbol:NOTCH2 "Neurogenic locus notch homolog protein 2"
species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0006959 "humoral immune response"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0072602 "interleukin-4 secretion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=NAS] [GO:0001709 "cell fate determination" evidence=TAS]
[GO:0009986 "cell surface" evidence=IDA] [GO:0004872 "receptor
activity" evidence=NAS] [GO:0009887 "organ morphogenesis"
evidence=IEP] [GO:0043066 "negative regulation of apoptotic
process" evidence=TAS] [GO:0006917 "induction of apoptosis"
evidence=TAS] [GO:0019827 "stem cell maintenance" evidence=TAS]
[GO:0007050 "cell cycle arrest" evidence=IDA] [GO:0016049 "cell
growth" evidence=IDA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IDA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IDA] [GO:0007399
"nervous system development" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0046849 "bone remodeling"
evidence=IMP] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0007220 "Notch receptor processing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0003184 "pulmonary
valve morphogenesis" evidence=IMP] [GO:0060413 "atrial septum
morphogenesis" evidence=IMP] [GO:0061314 "Notch signaling involved
in heart development" evidence=IC] Reactome:REACT_2001
Reactome:REACT_691 Reactome:REACT_71 InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 Reactome:REACT_111102
GO:GO:0043066 GO:GO:0005576 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0009986 GO:GO:0000139 GO:GO:0005887
GO:GO:0006917 GO:GO:0006355 GO:GO:0002437 GO:GO:0005789
eggNOG:COG0666 GO:GO:0016049 GO:GO:0046849 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0005509 GO:GO:0004872 GO:GO:0007050 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030326 GO:GO:0007368 PROSITE:PS01186
GO:GO:0007220 GO:GO:0042246 EMBL:AL359752 GO:GO:0030097
PROSITE:PS00010 GO:GO:0006959 GO:GO:0006367 GO:GO:0001709
GO:GO:0046579 GO:GO:0019827 Reactome:REACT_2155 GO:GO:0060413
GO:GO:0002011 GO:GO:0061314 GO:GO:0072602 SUPFAM:SSF90193
GO:GO:0003184 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 EMBL:AF308601 EMBL:AF315356
EMBL:AL512503 EMBL:AL596222 EMBL:U77493 IPI:IPI00297655
RefSeq:NP_001186930.1 RefSeq:NP_077719.2 UniGene:Hs.487360 PDB:2OO4
PDBsum:2OO4 ProteinModelPortal:Q04721 SMR:Q04721 IntAct:Q04721
MINT:MINT-1187009 STRING:Q04721 PhosphoSite:Q04721 DMDM:143811429
PaxDb:Q04721 PRIDE:Q04721 Ensembl:ENST00000256646
Ensembl:ENST00000581899 GeneID:4853 KEGG:hsa:4853 UCSC:uc001eik.3
CTD:4853 GeneCards:GC01M120454 HGNC:HGNC:7882 MIM:102500 MIM:600275
MIM:610205 neXtProt:NX_Q04721 Orphanet:955 Orphanet:261629
PharmGKB:PA31684 InParanoid:Q04721 OrthoDB:EOG4Q58NH
PhylomeDB:Q04721 ChiTaRS:NOTCH2 EvolutionaryTrace:Q04721
GenomeRNAi:4853 NextBio:18692 ArrayExpress:Q04721 Bgee:Q04721
CleanEx:HS_NOTCH2 Genevestigator:Q04721 GermOnline:ENSG00000134250
InterPro:IPR022336 PRINTS:PR01985 Uniprot:Q04721
Length = 2471
Score = 155 (59.6 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 90/340 (26%), Positives = 130/340 (38%)
Query: 36 NKC-IYGYCK-G------PPDYSCQCELGWTGVDC-SVNCLCNNHSTCVHGIGICDECHD 86
N+C I G+C+ G P Y CQC G+TG C S+ C S CV+G G C + D
Sbjct: 184 NECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAP-SPCVNG-GTCRQTGD 241
Query: 87 WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNC 144
+T C C G G+ T + DC +H GVC D + T C C G+ C
Sbjct: 242 FTF--ECN-CLPGFEGS-TCERNID--DCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFC 295
Query: 145 ERCLPGYYGDPT---DGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLW 201
+ P +GGTC + G + G G + TP C+
Sbjct: 296 TEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCID 355
Query: 202 IIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLP-DFVTSVGGTHQSTTLGVF 260
+ A ++ I+ PC++ A+ + L ++ + ++ G
Sbjct: 356 RVASFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYK----GAD 411
Query: 261 CTED-----MHRGYEVLEAKSGVMT---IHYKQGKPSEGFNATYQIFSC-PDKCPENRTC 311
CTED M A V T H + K G I C D C + TC
Sbjct: 412 CTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATC 471
Query: 312 INN----QCVCPPRRTGPDCQEEICPNECHE--FLNHGTC 345
++ C+C P G C+ EI NEC +N+G C
Sbjct: 472 LDKIGGFTCLCMPGFKGVHCELEI--NECQSNPCVNNGQC 509
Score = 147 (56.8 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 43/119 (36%), Positives = 53/119 (44%)
Query: 36 NKCIYGYCKGP-PDYSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDWTTGD 91
N CI+G C G Y C C+ GW G++C V+ CL N C +G G CD G
Sbjct: 727 NPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSN---PCQNG-GTCDNL---VNGY 779
Query: 92 HCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSITG-ECICQDNTQGKNCERCL 148
C C+ G G Q +C N N G C D I+G C C GKNC+ L
Sbjct: 780 RCT-CKKGFKGY-NCQVNIDECASNPCLNQ--GTCFDDISGYTCHCVLPYTGKNCQTVL 834
Score = 139 (54.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 89/335 (26%), Positives = 124/335 (37%)
Query: 36 NKCIY-GYCKGPPD-YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
N C+ G C + + C C G+TG C ++ + + C++G +C D G C
Sbjct: 501 NPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGA----KCIDHPNGYEC 556
Query: 94 QYCRAGSYGNATTQEGCRKCD---CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
Q C G G +E CD C+ HG G+ DS T CIC G C +
Sbjct: 557 Q-CATGFTG-VLCEENIDNCDPDPCH-HGQCQDGI-DSYT--CICNPGYMGAICSDQIDE 610
Query: 151 YYGDPT-DGGTCY-----YQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIG 204
Y P + G C YQC + PG G+ E N + P + + G
Sbjct: 611 CYSSPCLNDGRCIDLVNGYQCNCQ-----PGTSGVN---CEINFDDCASNPCIHGICMDG 662
Query: 205 QSLDSNSTAPADIILLRLQPDINV----PCNENAVYIYDGLPDF--VTSVGGTHQSTTLG 258
+ S +P R DI+ PC + A I +G+ F + G H S
Sbjct: 663 INRYSCVCSPG-FTGQRCNIDIDECASNPCRKGATCI-NGVNGFRCICPEGPHHPSCYSQ 720
Query: 259 VF-CTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSC-PDKCPENRTCIN--N 314
V C + SG + G G N C + C TC N N
Sbjct: 721 VNECLSNPCIHGNCTGGLSGYKCL-CDAGWV--GINCEVDKNECLSNPCQNGGTCDNLVN 777
Query: 315 --QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTC 345
+C C G +CQ I +EC + LN GTC
Sbjct: 778 GYRCTCKKGFKGYNCQVNI--DECASNPCLNQGTC 810
Score = 134 (52.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 93/348 (26%), Positives = 129/348 (37%)
Query: 31 ASLCYNKCIYGYCK-GPPDYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIG--IC 81
A+ C N G C G +SC C G+TG C + CL C N TC + C
Sbjct: 917 ANPCQNG---GSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTC 973
Query: 82 DECHDWTTGDHCQYCRAGSYGNATTQEGC-RKCDCNSHGNSVLGVCD-SITGECICQDNT 139
+C G HC+ + N T+ C C NS +C TG C
Sbjct: 974 -KCQAGFDGVHCE-----NNINECTESSCFNGGTCVDGINSFSCLCPVGFTGS-FCLHEI 1026
Query: 140 QGKNCERCLPGYYGDPTDG-GTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDT---- 194
+ CL G DG GT Y+C TG Q L + L R+ + K T
Sbjct: 1027 NECSSHPCLNE--GTCVDGLGT--YRCSCPLGYTGKNCQTLVN-LCSRSPCKNKGTCVQK 1081
Query: 195 -PSRECL----WIIGQSLDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTS-V 248
+CL W G D + + DI R + C + V I G + +
Sbjct: 1082 KAESQCLCPSGWA-GAYCDVPNVS-CDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPL 1139
Query: 249 G--GTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYK-QGKPS-EGFNATYQIFSCPDK 304
G G++ L + G + G Y+ + P +G N Y++ C ++
Sbjct: 1140 GYTGSYCEEQLDECASNPCQHGATCSDFIGG-----YRCECVPGYQGVNCEYEVDECQNQ 1194
Query: 305 -CPENRTCIN--N--QCVCPPRRTGPDCQEEI--CPNECHEFLNHGTC 345
C TCI+ N +C CPP G C+E I C H LN G C
Sbjct: 1195 PCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPH-CLNGGQC 1241
Score = 134 (52.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 84/351 (23%), Positives = 129/351 (36%)
Query: 34 CYNK-CI-YGYCKGPP-DYSCQCELGWTGVDCSVN---CL---CNNHSTCVHGIGICD-E 83
C +K C+ +G C Y C+C G++G+DC + CL C N +C+ G+
Sbjct: 877 CISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCL 936
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCD-CNSHGNSVLGVCDSITGECICQDNTQGK 142
C TGD CQ + N E C+ C+ + NS C + C++N
Sbjct: 937 CLPGFTGDKCQ-----TDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINEC 991
Query: 143 NCERCLPGYYGDPTDGGTCYYQCMARGMLTGP------GPQGLGSGLAERNAWEGKDTPS 196
C G G DG + C+ TG L E +G T
Sbjct: 992 TESSCFNG--GTCVDGINSF-SCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYR 1048
Query: 197 REC-LWIIGQS------LDSNSTAPADIILLRLQPDINVPCNENAVYIYDGLPDFVTSVG 249
C L G++ L S S ++ + + C Y +P+ +
Sbjct: 1049 CSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIA 1108
Query: 250 GTHQSTTLGVFCTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATY---QIFSCPDK-C 305
+ + + C H G + +G HY Q P G+ +Y Q+ C C
Sbjct: 1109 ASRRGVLVEHLC---QHSGVCI---NAG--NTHYCQC-PL-GYTGSYCEEQLDECASNPC 1158
Query: 306 PENRTCIN----NQCVCPPRRTGPDCQEEI--CPNE-CHEFLNHGTC-DLL 348
TC + +C C P G +C+ E+ C N+ C N GTC DL+
Sbjct: 1159 QHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQ---NGGTCIDLV 1206
Score = 132 (51.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 45/150 (30%), Positives = 56/150 (37%)
Query: 34 CYN--KCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
C N KCI P Y CQC G+TGV C N + C HG +C D
Sbjct: 541 CLNGAKCI----DHPNGYECQCATGFTGVLCEENIDNCDPDPCHHG-----QCQDGIDSY 591
Query: 92 HCQYCRAGSYGNATTQE--GCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKNCERCL 148
C C G G + + C C + G + D + G +C CQ T G NCE
Sbjct: 592 TC-ICNPGYMGAICSDQIDECYSSPCLNDGRCI----DLVNGYQCNCQPGTSGVNCEINF 646
Query: 149 PGYYGDPTDGGTCY-----YQCMARGMLTG 173
+P G C Y C+ TG
Sbjct: 647 DDCASNPCIHGICMDGINRYSCVCSPGFTG 676
Score = 119 (46.9 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 38/135 (28%), Positives = 56/135 (41%)
Query: 34 CYNKCIYGYCKGPPD---YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTT 89
C N + CK P+ Y+C C GW G C+++ C + HG+ CH+ T
Sbjct: 842 CENAAV---CKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGL-----CHN-TQ 892
Query: 90 GDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVC-DSI-TGECICQDNTQGKNCERC 147
G + C G + +E C N N G C D + T C+C G C+
Sbjct: 893 GSYMCECPPG-FSGMDCEEDIDDCLANPCQNG--GSCMDGVNTFSCLCLPGFTGDKCQTD 949
Query: 148 LPGYYGDPT-DGGTC 161
+ +P +GGTC
Sbjct: 950 MNECLSEPCKNGGTC 964
Score = 114 (45.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 45/149 (30%), Positives = 60/149 (40%)
Query: 34 CYNK-CIY-GYCKGPPD-YSCQCELGWTGVDCSVN---CLCNNHSTCVHGIGICDECHDW 87
CY+ C+ G C + Y C C+ G +GV+C +N C N C+HGI C D
Sbjct: 611 CYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASN---PCIHGI-----CMDG 662
Query: 88 TTGDHCQYCRAGSYG---NATTQEGCRKCDCNSHGNSVLGVCDSITG-ECICQDNTQGKN 143
C C G G N E C C + GV G CIC + +
Sbjct: 663 INRYSC-VCSPGFTGQRCNIDIDE-CASNPCRKGATCINGV----NGFRCICPEGPHHPS 716
Query: 144 C----ERCL--PGYYGDPTDGGTCYYQCM 166
C CL P +G+ T GG Y+C+
Sbjct: 717 CYSQVNECLSNPCIHGNCT-GGLSGYKCL 744
Score = 107 (42.7 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 31/116 (26%), Positives = 46/116 (39%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
Y C C++G+TG +C C +H C +G C C+ C G G +
Sbjct: 129 YECTCQVGFTGKECQWTDACLSHP-CANG----STCTTVANQFSCK-CLTGFTGQKCETD 182
Query: 109 GCRKCDCNSHGNSVLGVCDSITG--ECICQDNTQGKNCERCLPGYYGDP-TDGGTC 161
+CD H G C ++ G +C C G+ C+ P +GGTC
Sbjct: 183 -VNECDIPGHCQHG-GTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTC 236
Score = 100 (40.3 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 39/139 (28%), Positives = 56/139 (40%)
Query: 50 SCQCELGWTGVDC--SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
+C+C G+TG DC S + C C++G CH + + C+ G G
Sbjct: 89 TCRCASGFTGEDCQYSTSHPCFVSRPCLNG----GTCHMLSRDTYECTCQVGFTGKE--- 141
Query: 108 EGCRKCD-CNSHGNSVLGVCDSITGE--CICQDNTQGKNCE----RC-LPGYYGDPTDGG 159
C+ D C SH + C ++ + C C G+ CE C +PG+ GG
Sbjct: 142 --CQWTDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHC---QHGG 196
Query: 160 TCY-----YQCMARGMLTG 173
TC YQC TG
Sbjct: 197 TCLNLPGSYQCQCPQGFTG 215
Score = 86 (35.3 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 24/64 (37%), Positives = 30/64 (46%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINNQ----CVCPPRRTGPDCQEEI--C-PNECHEFLN 341
+G T I C K C + C N Q C CPP +G DC+E+I C N C N
Sbjct: 866 QGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQ---N 922
Query: 342 HGTC 345
G+C
Sbjct: 923 GGSC 926
Score = 83 (34.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 290 EGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEICPNECHEFLNHGT 344
+G + +I C C N C++ QC+CPP TGP CQ +I LN
Sbjct: 487 KGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAK 546
Query: 345 C 345
C
Sbjct: 547 C 547
Score = 66 (28.3 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 315 QCVCPPRRTGPDCQEEICPNEC--HEFLNHGTCDLLLTGVHIT--HG-RTLHYQVDLIRC 369
+C+C G +C E+ NEC + N GTCD L+ G T G + + QV++ C
Sbjct: 742 KCLCDAGWVGINC--EVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDEC 799
Score = 65 (27.9 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 22/72 (30%), Positives = 30/72 (41%)
Query: 305 CPENRTCIN----NQCVCPPRRTGPDCQEEICPNECHEF-LNHG-TCDLLLTGVHIT--- 355
C + CIN + C CP TG C+E++ +EC HG TC + G
Sbjct: 1120 CQHSGVCINAGNTHYCQCPLGYTGSYCEEQL--DECASNPCQHGATCSDFIGGYRCECVP 1177
Query: 356 --HGRTLHYQVD 365
G Y+VD
Sbjct: 1178 GYQGVNCEYEVD 1189
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 287 KPSEGFNATYQIFSCPDK-CPENRTCINN----QCVCPPRRTGPDCQEEI--C-PNEC 336
K +G+N I C C TC ++ C C TG +CQ + C PN C
Sbjct: 785 KGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPC 842
Score = 58 (25.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 288 PSEGFNATYQIFSC-PDKCPENRTCINNQ------CVCPPRRTGPDCQEEICPNEC--HE 338
P G N + C P+ C C + C+C P G C +I +EC
Sbjct: 824 PYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDI--DECISKP 881
Query: 339 FLNHGTC 345
+NHG C
Sbjct: 882 CMNHGLC 888
Score = 57 (25.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 316 CVCPPRRTGPDCQE--EICPN-ECHEFLNHGTC 345
CVC TG C+ ++CP C LN GTC
Sbjct: 1290 CVCRSAFTGRHCETFVDVCPQMPC---LNGGTC 1319
Score = 47 (21.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 14/46 (30%), Positives = 18/46 (39%)
Query: 301 CPDK-CPENRTCI--NNQ-----CVCPPRRTGPDCQEEICPNECHE 338
CP C TC +N C CPP +G CQ +C +
Sbjct: 1308 CPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQSSCGQVKCRK 1353
>UNIPROTKB|F1NJ23 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:NTWQLAS EMBL:AADN02036854 EMBL:AADN02036852 EMBL:AADN02036853
IPI:IPI00586930 Ensembl:ENSGALT00000012832 ArrayExpress:F1NJ23
Uniprot:F1NJ23
Length = 1782
Score = 188 (71.2 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 47/152 (30%), Positives = 62/152 (40%)
Query: 41 GYCKGPPD-YSCQCEL---GWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQY 95
G C P Y QC+ G+ G C CN H+ C G C C D T G +C+
Sbjct: 830 GQCHCFPGVYGRQCDRCLPGFWGFPSCQPCHCNGHADDCSPYTGECLHCRDHTAGPNCER 889
Query: 96 CRAGSYGNATTQEG--CRKCDCNS---HGNSVLGVC--DSITGE--CICQDNTQGKNCER 146
C AG YG+ G CR C C G C D +T + C+C G C+
Sbjct: 890 CEAGYYGDPILGSGDHCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCSTGYIGSRCDE 949
Query: 147 CLPGYYGDPTD-GGTCYYQCMARGMLTGPGPQ 177
C G++G P + GG C C + P+
Sbjct: 950 CASGFFGSPDEVGGACQ-PCQCNNNIDSTDPE 980
Score = 175 (66.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 36/108 (33%), Positives = 53/108 (49%)
Query: 49 YSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQE 108
+S L T + C + + S C G C +C G C C G++G +
Sbjct: 752 FSISALLHETALSCQCDPQGSLSSVCDPSGGQC-QCRPNVVGRQCNRCAPGTFGFGPS-- 808
Query: 109 GCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
GCR C+C+ G S CD+ TG+C C G+ C+RCLPG++G P+
Sbjct: 809 GCRPCECHLRG-SYNSFCDAETGQCHCFPGVYGRQCDRCLPGFWGFPS 855
Score = 170 (64.9 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 37/98 (37%), Positives = 47/98 (47%)
Query: 62 CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
C + + +S C G C C G C C G +G + C+ C CN H +
Sbjct: 813 CECHLRGSYNSFCDAETGQC-HCFPGVYGRQCDRCLPGFWGFPS----CQPCHCNGHADD 867
Query: 122 VLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDG 158
C TGEC+ C+D+T G NCERC GYYGDP G
Sbjct: 868 ----CSPYTGECLHCRDHTAGPNCERCEAGYYGDPILG 901
Score = 168 (64.2 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 44/137 (32%), Positives = 61/137 (44%)
Query: 21 CTVLLLYIFNASLCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGI 80
C YI S C ++C G+ P + C+ C+ N + C G
Sbjct: 936 CVCSTGYI--GSRC-DECASGFFGSPDEVGGACQ----PCQCNNNIDSTDPEACDKRTGT 988
Query: 81 CDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCD--------SITGE 132
C +C T G++C CR G YG+A Q+ CRKC CN G +V CD + TG+
Sbjct: 989 CVKCLYHTEGENCHLCRQGYYGSALQQD-CRKCVCNYLG-TVREDCDDAENCRCEAATGQ 1046
Query: 133 CICQDNTQGKNCERCLP 149
C C G+ C+RC P
Sbjct: 1047 CRCLPGVVGQTCDRCAP 1063
Score = 167 (63.8 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 35/99 (35%), Positives = 49/99 (49%)
Query: 67 LCNNHSTCVHGI--GICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCDCNSHGNSVL 123
+C+ ++ G+ G C C + G+ C C+ G YG +A GC+ C CN G
Sbjct: 401 VCDRYTDFSTGLIAGQC-RCKLFVEGERCDLCKEGFYGLSADDPSGCQSCACNPLGTHPG 459
Query: 124 G-VCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTC 161
G CDS TG C C+ GK C +CLP ++G D C
Sbjct: 460 GNPCDSETGNCYCKRLVTGKQCNQCLPEHWGLSNDMDGC 498
Score = 158 (60.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 45/150 (30%), Positives = 65/150 (43%)
Query: 30 NASLCYNKCIYGYCK---GPPDYSC-QCELG-W---TGVDCSVNCLCNNHST----CVHG 77
+A C + G C+ G +C +C W +G C C C+ + C
Sbjct: 1034 DAENCRCEAATGQCRCLPGVVGQTCDRCAPNTWRLASGTGCEP-CDCDTARSIGLACNEF 1092
Query: 78 IGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQD 137
G C C G C+ C+ +G+ + + CR CDCN G CD TG+CIC +
Sbjct: 1093 TGQC-HCMPGFGGRTCRECQELFWGDPSVE--CRACDCNPRGIQT-PQCDRATGQCICNE 1148
Query: 138 NTQGKNCERCLPGYYGDPTDGGTCYYQCMA 167
+G C++C GY G D C+ QC A
Sbjct: 1149 GVEGPRCDKCSRGYSGFFPDCVPCH-QCFA 1177
Score = 152 (58.6 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 65 NCLCN---NH---STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSH 118
+C CN H + C G C C TG C C +G + +GCR CDC+
Sbjct: 448 SCACNPLGTHPGGNPCDSETGNC-YCKRLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDQ- 505
Query: 119 GNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQG 178
G ++ C S +G+C C+ + G+ C + PGYY D +Y A GPG
Sbjct: 506 GGALHNNCSSESGQCECRPHMFGRQCNQVEPGYYFISLD----HYIYEAEEANLGPGVN- 560
Query: 179 LGSGLAERNAWEGKDTPS 196
+ ER + + + TPS
Sbjct: 561 ----IIERQSTQDR-TPS 573
Score = 140 (54.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 80 ICDECHDWTTGDHCQYCRAGSYGNATTQEG-CRKCDCNSHGNSV-LGVCDSITGECI-CQ 136
+C C G C C +G +G+ G C+ C CN++ +S CD TG C+ C
Sbjct: 935 VC-VCSTGYIGSRCDECASGFFGSPDEVGGACQPCQCNNNIDSTDPEACDKRTGTCVKCL 993
Query: 137 DNTQGKNCERCLPGYYG 153
+T+G+NC C GYYG
Sbjct: 994 YHTEGENCHLCRQGYYG 1010
Score = 39 (18.8 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 313 NNQCVCPPRRTGPDCQE 329
+ QC C P G C +
Sbjct: 517 SGQCECRPHMFGRQCNQ 533
Score = 38 (18.4 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 315 QCVCPPRRTGPDCQE 329
QC+C GP C +
Sbjct: 1143 QCICNEGVEGPRCDK 1157
>FB|FBgn0015773 [details] [associations]
symbol:NetA "Netrin-A" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0007411
"axon guidance" evidence=IGI;ISS;NAS] [GO:0070983 "dendrite
guidance" evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 eggNOG:NOG244580
GeneTree:ENSGT00700000104042 EMBL:U60316 EMBL:U63736 EMBL:AY089580
RefSeq:NP_001245667.1 RefSeq:NP_511154.3 UniGene:Dm.2915
ProteinModelPortal:Q24567 SMR:Q24567 IntAct:Q24567 MINT:MINT-285237
STRING:Q24567 EnsemblMetazoa:FBtr0073942 GeneID:32398
KEGG:dme:Dmel_CG18657 CTD:32398 FlyBase:FBgn0015773
InParanoid:Q24567 OMA:AIMAKVI OrthoDB:EOG470RZN PhylomeDB:Q24567
GenomeRNAi:32398 NextBio:778263 Bgee:Q24567 GermOnline:CG18657
GO:GO:2000289 Uniprot:Q24567
Length = 726
Score = 174 (66.3 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 38/117 (32%), Positives = 54/117 (46%)
Query: 52 QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATT----Q 107
+C C N S V G G+C C TTG +C C+ G Y +AT +
Sbjct: 368 ECNCNKHARQCRFNMEIFRLSQGVSG-GVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHR 426
Query: 108 EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQ 164
+ C+ CDC+ G+S +C+S +G+C C+D G C RC GY + C Q
Sbjct: 427 KVCKACDCHPIGSSGK-ICNSTSGQCPCKDGVTGLTCNRCARGYQQSRSHIAPCIKQ 482
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 36/123 (29%), Positives = 53/123 (43%)
Query: 59 GVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSY----GNATTQEG--CRK 112
G C N + ST G C EC T G C+ C+ + AT +E C++
Sbjct: 310 GGRCKCNGHASKCSTDASGQLNC-ECSHNTAGRDCERCKPFHFDRPWARATAKEANECKE 368
Query: 113 CDCNSHGNS------VLGVCDSITGE-CI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQ 164
C+CN H + + ++G C C+ +T G+NC +C G+Y D T T
Sbjct: 369 CNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKV 428
Query: 165 CMA 167
C A
Sbjct: 429 CKA 431
>UNIPROTKB|F1NRS3 [details] [associations]
symbol:DLL1 "Delta-like protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0005112
"Notch binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA]
[GO:0007386 "compartment pattern specification" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0045608
"negative regulation of auditory receptor cell differentiation"
evidence=IEA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IEA] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
[GO:0070986 "left/right axis specification" evidence=IEA]
[GO:0072014 "proximal tubule development" evidence=IEA] [GO:0072070
"loop of Henle development" evidence=IEA] [GO:0097150 "neuronal
stem cell maintenance" evidence=IEA] InterPro:IPR000742
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414 Pfam:PF07657
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0005886 GO:GO:0031410 GO:GO:0007219
GO:GO:0005509 GO:GO:0007267 GO:GO:0045747 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0045638
GeneTree:ENSGT00690000101660 OMA:YCDQCIR EMBL:AADN02035624
EMBL:AADN02035625 IPI:IPI00592713 Ensembl:ENSGALT00000018232
Ensembl:ENSGALT00000037704 Uniprot:F1NRS3
Length = 728
Score = 152 (58.6 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 39/131 (29%), Positives = 56/131 (42%)
Query: 35 YNKCIYGYCKGPPDYSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTGDHC 93
Y C++G C+ P + C C+ GW G+ C+ + C +H C +G C + G +
Sbjct: 267 YPGCLHGTCQQP--WQCNCQEGWGGLFCNQDLNYCTHHKPCKNGA----TCTNTGQGSYT 320
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE--CICQDNTQGKNCERCLPGY 151
CR G G++ E +CD N N G C + C C GKNCE
Sbjct: 321 CSCRPGYTGSSCEIE-INECDANPCKNG--GSCTDLENSYSCTCPPGFYGKNCELSAMTC 377
Query: 152 YGDPT-DGGTC 161
P +GG C
Sbjct: 378 ADGPCFNGGRC 388
Score = 137 (53.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 47/148 (31%), Positives = 63/148 (42%)
Query: 34 CYNKCIYGYCKGPPD--YSCQCELGWTGVDCSVNC-LCNNHSTCVHGIGICDECHDWTTG 90
C+N G C PD YSC+C LG++G +C C++ S C +G +C D
Sbjct: 382 CFNG---GRCTDNPDGGYSCRCPLGYSGFNCEKKIDYCSS-SPCANGA----QCVDLGNS 433
Query: 91 DHCQYCRAGSYGNATTQ--EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL 148
CQ C+AG G + C C + G GV D C C GKNC +
Sbjct: 434 YICQ-CQAGFTGRHCDDNVDDCASFPCVNGGTCQDGVNDY---SCTCPPGYNGKNCSTPV 489
Query: 149 PGYYGDPT-DGGTCY-----YQC-MARG 169
+P +G TC+ Y C ARG
Sbjct: 490 SRCEHNPCHNGATCHERSNRYVCECARG 517
Score = 67 (28.6 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 291 GFNATYQIFSCPDK-CPENRTCIN--NQ--CVCPPRRTGPDCQEEICPNECHEF--LNHG 343
GFN +I C C C++ N C C TG C + + ++C F +N G
Sbjct: 406 GFNCEKKIDYCSSSPCANGAQCVDLGNSYICQCQAGFTGRHCDDNV--DDCASFPCVNGG 463
Query: 344 TC 345
TC
Sbjct: 464 TC 465
Score = 66 (28.3 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 17/48 (35%), Positives = 21/48 (43%)
Query: 305 CPENRTC---INN-QCVCPPRRTGPDCQEEI--CP-NECHEFLNHGTC 345
C TC +N+ C CPP G +C + C N CH N TC
Sbjct: 459 CVNGGTCQDGVNDYSCTCPPGYNGKNCSTPVSRCEHNPCH---NGATC 503
>UNIPROTKB|G3V6X3 [details] [associations]
symbol:Ntn3 "Netrin 2-like (Chicken)" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
RGD:619811 GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 EMBL:CH473948
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
OMA:TASPLCW GeneTree:ENSGT00700000104042 RefSeq:NP_446184.1
UniGene:Rn.95949 Ensembl:ENSRNOT00000009735 GeneID:114524
KEGG:rno:114524 NextBio:618679 Uniprot:G3V6X3
Length = 580
Score = 172 (65.6 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 43/132 (32%), Positives = 57/132 (43%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHST-CVHGI-----------GICDE 83
++C YC P Q G C + C CN H+ C + G+C
Sbjct: 286 SRCKPFYCDRP----WQRATGQEAHAC-LACSCNGHARRCRFNMELYRLSGRRSGGVCLN 340
Query: 84 CHDWTTGDHCQYCRAGSY---GNATT-QEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C T G HC YCR G Y G + + CR CDC+ G + C+ TG+C C+D
Sbjct: 341 CRHNTAGRHCHYCREGFYRDPGRVLSDRRACRACDCHPVG-AAGKTCNQTTGQCPCKDGV 399
Query: 140 QGKNCERCLPGY 151
G C RC PG+
Sbjct: 400 TGLTCNRCAPGF 411
Score = 120 (47.3 bits), Expect = 0.00038, P = 0.00038
Identities = 42/127 (33%), Positives = 52/127 (40%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCV---HGIGICDECHDWTTGDHCQYCRA---- 98
P YS EL G C N + S C+ HG +CD C T G C C+
Sbjct: 241 PYSYSAT-ELQ-VGGRCKCN---GHSSRCLMDTHGHLVCD-CQHGTEGPDCSRCKPFYCD 294
Query: 99 GSYGNATTQEG--CRKCDCNSHG-----NSVLGVCDSIT--GECI-CQDNTQGKNCERCL 148
+ AT QE C C CN H N L G C+ C+ NT G++C C
Sbjct: 295 RPWQRATGQEAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCR 354
Query: 149 PGYYGDP 155
G+Y DP
Sbjct: 355 EGFYRDP 361
>MGI|MGI:1341188 [details] [associations]
symbol:Ntn3 "netrin 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IDA;IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA] [GO:0007409 "axonogenesis"
evidence=TAS] [GO:0007520 "myoblast fusion" evidence=ISA]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:1341188 GO:GO:0005794
GO:GO:0005576 GO:GO:0006355 GO:GO:0005578 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 Reactome:REACT_127416
GO:GO:0007409 PROSITE:PS01186 GO:GO:0007520 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 CTD:4917 KO:K06844
OMA:TASPLCW EMBL:AF152418 EMBL:AK031199 EMBL:AF149094 EMBL:AF128866
IPI:IPI00471207 RefSeq:NP_035077.1 UniGene:Mm.259542
ProteinModelPortal:Q9R1A3 SMR:Q9R1A3 STRING:Q9R1A3
PhosphoSite:Q9R1A3 PRIDE:Q9R1A3 Ensembl:ENSMUST00000024931
GeneID:18209 KEGG:mmu:18209 GeneTree:ENSGT00700000104042
InParanoid:Q9R1A3 NextBio:293594 Bgee:Q9R1A3 Genevestigator:Q9R1A3
GermOnline:ENSMUSG00000036473 Uniprot:Q9R1A3
Length = 580
Score = 172 (65.6 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 43/132 (32%), Positives = 57/132 (43%)
Query: 36 NKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHST-CVHGI-----------GICDE 83
++C YC P Q G C + C CN H+ C + G+C
Sbjct: 286 SRCKPFYCDRP----WQRATGQEAHAC-LACSCNGHARRCRFNMELYRLSGRRSGGVCLN 340
Query: 84 CHDWTTGDHCQYCRAGSY---GNATT-QEGCRKCDCNSHGNSVLGVCDSITGECICQDNT 139
C T G HC YCR G Y G + + CR CDC+ G + C+ TG+C C+D
Sbjct: 341 CRHNTAGRHCHYCREGFYRDPGRVLSDRRACRACDCHPVG-AAGKTCNQTTGQCPCKDGV 399
Query: 140 QGKNCERCLPGY 151
G C RC PG+
Sbjct: 400 TGLTCNRCAPGF 411
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 40/124 (32%), Positives = 49/124 (39%)
Query: 46 PPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRA----GSY 101
P YS EL G C N + HG +CD C T G C C+ +
Sbjct: 241 PYSYSAT-ELQ-VGGRCKCNGHASRCLLDTHGHLVCD-CQHGTEGPDCSRCKPFYCDRPW 297
Query: 102 GNATTQEG--CRKCDCNSHG-----NSVLGVCDSIT--GECI-CQDNTQGKNCERCLPGY 151
AT QE C C CN H N L G C+ C+ NT G++C C G+
Sbjct: 298 QRATGQEAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGF 357
Query: 152 YGDP 155
Y DP
Sbjct: 358 YRDP 361
>UNIPROTKB|F1LZR3 [details] [associations]
symbol:Odz2 "Protein Odz2" species:10116 "Rattus
norvegicus" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 GO:GO:0016021 GO:GO:0007165 Gene3D:2.120.10.30
InterPro:IPR011042 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR008969 SUPFAM:SSF49464
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR006530
TIGRFAMs:TIGR01643 InterPro:IPR022385 TIGRFAMs:TIGR03696
IPI:IPI01016383 Ensembl:ENSRNOT00000037859 ArrayExpress:F1LZR3
Uniprot:F1LZR3
Length = 2536
Score = 136 (52.9 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 36/112 (32%), Positives = 48/112 (42%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSV---NCL---CNNHSTCVHGIGICDECHDWTTGDHC 93
C G YS CQC GW G +C V C+ C H +C+ G +C + G+HC
Sbjct: 444 CSGNGQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCAAGYK---GEHC 500
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
+ + C C+SHG VC + GEC+C G NCE
Sbjct: 501 E------------EVDCLDPTCSSHG-----VC--VNGECLCSPGWGGLNCE 533
Score = 96 (38.9 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 291 GFNATYQIFSCPDKCPENRTCINNQ--CVCPPRRTGPDCQEEICPNECHEFLNHGTCDL 347
G N CPD+C + T + + C C P GPDC + CP+ C+ +G C L
Sbjct: 529 GLNCELARVQCPDQCSGHGTYLPDSGLCNCDPNWMGPDCSVDGCPDLCN---GNGRCTL 584
>UNIPROTKB|A7MB18 [details] [associations]
symbol:NTN4 "NTN4 protein" species:9913 "Bos taurus"
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=IEA] [GO:0043237 "laminin-1 binding" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277
eggNOG:NOG329215 HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 HOGENOM:HOG000060085 OrthoDB:EOG4M0F17
EMBL:DAAA02013606 EMBL:DAAA02013607 EMBL:BC151286 IPI:IPI00697984
RefSeq:NP_001095673.1 UniGene:Bt.26919 Ensembl:ENSBTAT00000004136
GeneID:537455 KEGG:bta:537455 InParanoid:A7MB18 NextBio:20877139
Uniprot:A7MB18
Length = 627
Score = 172 (65.6 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNA----TTQEGCRKCDCNSHGNSVLGV-----CDSI 129
G+C++C T G HCQ C+ G Y + + + C+ C C+ G++VL CD
Sbjct: 357 GVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAPDACKSCSCHPVGSAVLPFSSVTFCDPS 416
Query: 130 TGECICQDNTQGKNCERCLPGYYG 153
G+C C+ G +CERC+ GY+G
Sbjct: 417 NGDCPCKPGVAGPHCERCMVGYWG 440
Score = 136 (52.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 34/96 (35%), Positives = 48/96 (50%)
Query: 75 VHGIGICDECHDWTTGDHCQYCRA--------GSYGNATTQEGCRKCDCNSHGNSV---L 123
VHG IC H+ T G HCQ+C + G + CR C CN H ++ +
Sbjct: 289 VHGKCICK--HN-TAGTHCQHCAPLYNDRPWEAADGKTGSPNECRTCKCNGHADACHFDI 345
Query: 124 GVCDSIT----GECI-CQDNTQGKNCERCLPGYYGD 154
V ++ G C CQ NT+G++C+RC PG+Y D
Sbjct: 346 NVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWD 381
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 56 GWTGV--DCSVNCLCNNHSTCVH-GI-----------GICDECHDWTTGDHCQYCRAGSY 101
G TG +C C CN H+ H I G+C++C T G HCQ C+ G Y
Sbjct: 321 GKTGSPNECRT-CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFY 379
Query: 102 GNA----TTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+ + + C+ C C+ G++VL S+T C D + G +C C PG G
Sbjct: 380 WDLRRPFSAPDACKSCSCHPVGSAVLPF-SSVT---FC-DPSNG-DCP-CKPGVAG 428
Score = 46 (21.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 313 NNQCVCPPRRTGPDCQ 328
N C C P GP C+
Sbjct: 417 NGDCPCKPGVAGPHCE 432
>UNIPROTKB|F1ML32 [details] [associations]
symbol:SCARF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048680 "positive regulation of axon regeneration"
evidence=IEA] [GO:0030169 "low-density lipoprotein particle
binding" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005044
"scavenger receptor activity" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 GO:GO:0016358
GO:GO:0016322 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 GO:GO:0048680 GO:GO:0030169 InterPro:IPR009030
SUPFAM:SSF57184 GO:GO:0005044 GeneTree:ENSGT00690000101691
OMA:GWWGPEC EMBL:DAAA02048662 IPI:IPI00711101
Ensembl:ENSBTAT00000015261 Uniprot:F1ML32
Length = 841
Score = 160 (61.4 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 43/160 (26%), Positives = 64/160 (40%)
Query: 21 CTVLLLYIFNASLCYNKCIY-GYCKGPPDY---SC--QCELGWTGVDCSVNCLCNNHSTC 74
CT+ + +A C+ G C+ P + C +C + G DC C C+ H C
Sbjct: 63 CTIPICEGLDACREDEVCVKPGLCRCKPGFFGAQCNSRCPGQYWGPDCREVCACHPHGQC 122
Query: 75 VHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCD-------CNS--HGNSVLG 124
G+C C GD C++ C G +G + G +C+ C N
Sbjct: 123 EPATGVC-HCQPDRWGDRCEFPCACGPHGRCNPETGACRCEPGWWSPTCRRPCQCNPAAA 181
Query: 125 VCDSITGECICQDNTQGKNCE-RCLPGYYGDPT--DGGTC 161
CD TG C+C+ G+ C RC +G P + G C
Sbjct: 182 RCDQATGSCLCEPGWWGRRCSFRC--ACHGSPCAQESGRC 219
Score = 150 (57.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 39/124 (31%), Positives = 51/124 (41%)
Query: 40 YGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRA 98
+G C P +C+CE GW C C CN + C G C C G C + R
Sbjct: 149 HGRCN-PETGACRCEPGWWSPTCRRPCQCNPAAARCDQATGSC-LCEPGWWGRRCSF-RC 205
Query: 99 GSYGNATTQEGCR-KC-------DCNSHGNSVLGVCDSITGECICQDNTQGKNCER-CLP 149
+G+ QE R C +C V G C +++G+C C QG CE C
Sbjct: 206 ACHGSPCAQESGRCACRPGWWGPECRQPCECVRGRCSAVSGQCSCPPGFQGVRCELPCPA 265
Query: 150 GYYG 153
G YG
Sbjct: 266 GQYG 269
Score = 140 (54.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 44/143 (30%), Positives = 59/143 (41%)
Query: 34 CYNKCIYGYCK-GPP---DY-SCQ-CELGWTGVDC---------SVNCL-----CNNHST 73
C + C G+CK P D SC+ C+ GW G C NC C
Sbjct: 272 CRDSC--GHCKQNKPCSADTGSCEACKPGWNGTQCHQPCPPGTFGENCSQQCPHCRLGEA 329
Query: 74 CVHGIGICDECHDWTTGDHCQY-CRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGE 132
C G C C G C+ C G++G EGC C + V G CD++TGE
Sbjct: 330 CQPDTGHCQRCEPGWRGPRCEDPCLIGTFG-----EGCGST-CPT---CVQGACDAVTGE 380
Query: 133 CICQDNTQGKNCERCLP-GYYGD 154
C+C G +C P G++G+
Sbjct: 381 CVCNAGYWGPSCNTSCPSGFHGN 403
Score = 59 (25.8 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 302 PDKCPENR-TCINNQCVCPPRRTGPDCQEEICP 333
P +C R + ++ QC CPP G C E CP
Sbjct: 233 PCECVRGRCSAVSGQCSCPPGFQGVRC-ELPCP 264
Score = 57 (25.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 301 CPDKCPE--NRTC--INNQCVCPPRRTGPDCQEEICPNECH 337
C CP C + +CVC GP C CP+ H
Sbjct: 362 CGSTCPTCVQGACDAVTGECVCNAGYWGPSCNTS-CPSGFH 401
Score = 47 (21.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 15/44 (34%), Positives = 17/44 (38%)
Query: 287 KPSEGFNATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEE 330
KP G+N T C CP N CP R G CQ +
Sbjct: 296 KP--GWNGT----QCHQPCPPGTFGENCSQQCPHCRLGEACQPD 333
>ZFIN|ZDB-GENE-021226-3 [details] [associations]
symbol:lamc1 "laminin, gamma 1" species:7955 "Danio
rerio" [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007634 "optokinetic behavior" evidence=IMP]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IMP] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] ZFIN:ZDB-GENE-021226-3 GO:GO:0007155
PROSITE:PS00022 GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0050908 GO:GO:0031290 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0007634 eggNOG:NOG235720 GeneTree:ENSGT00690000102103
HOGENOM:HOG000019301 EMBL:AF468048 EMBL:BX681417 EMBL:BX571812
IPI:IPI00496826 RefSeq:NP_775384.1 UniGene:Dr.132970
ProteinModelPortal:Q1LVF0 SMR:Q1LVF0 STRING:Q1LVF0
Ensembl:ENSDART00000004277 GeneID:286832 KEGG:dre:286832 CTD:3915
HOVERGEN:HBG100808 InParanoid:Q8JHV8 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS NextBio:20806483 ArrayExpress:Q1LVF0 Bgee:Q1LVF0
Uniprot:Q1LVF0
Length = 1593
Score = 175 (66.7 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 40/108 (37%), Positives = 56/108 (51%)
Query: 58 TGVDCSVNCLCN---NHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCD 114
+G C ++C CN + ST G C C GD C C+ G Y ++ ++ GCR C
Sbjct: 375 SGQRC-LSCGCNPVGSLSTQCDNTGRCS-CKPGVMGDKCDRCQPG-Y-HSLSEAGCRPCS 430
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGTC 161
CN G++ CD TG C C++N G NC+RC GY+ DP + C
Sbjct: 431 CNPAGSTQ--ECDVQTGRCQCKENVDGFNCDRCKLGYFNLDPQNPQGC 476
Score = 169 (64.5 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 54/187 (28%), Positives = 79/187 (42%)
Query: 37 KCIYGYCKGPPDYSCQCELGWTGVDCSVN-------CLCNNHST------CVHGIGICDE 83
KCIY G + +C+ G+ G + N C C+ + T C G C
Sbjct: 835 KCIYNTA-GV--FCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCP- 890
Query: 84 CHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
C C C G Y N + +GC +C+CN G S G CD ++G+C CQ G++
Sbjct: 891 CLPHVINRDCGACELGFY-NLQSGKGCERCNCNPIG-STNGQCDIVSGQCECQPGVTGQH 948
Query: 144 CERCLPGYYGDPTDG---------GTCYYQCMARGML-TGPGPQGLGSGLAERNAWEGKD 193
CERC ++G + G G+ QC G PG G + E N + +
Sbjct: 949 CERCEVNFFGFSSSGCKPCDCDPEGSESAQCKEDGRCHCRPGFVGSRCDMCEENYFYNRS 1008
Query: 194 TPS-REC 199
TP ++C
Sbjct: 1009 TPGCQQC 1015
Score = 163 (62.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 32/80 (40%), Positives = 40/80 (50%)
Query: 84 CHDWTTGDHCQYCRAG---SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQ 140
C G HC+ C G S C +C+CN H ++ CD TG C CQ NT
Sbjct: 676 CPQGYLGQHCEQCDQGFRRSRPELRRFSTCERCNCNGHSDT----CDPETGMCNCQHNTA 731
Query: 141 GKNCERCLPGYYGDPTDGGT 160
G +CERC G+YGD T G +
Sbjct: 732 GLSCERCKDGFYGDSTVGSS 751
Score = 160 (61.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 33/77 (42%), Positives = 40/77 (51%)
Query: 76 HGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECIC 135
HG G C C D T G C+ C A Y A+ Q C C CN G S+ CD+ TG C C
Sbjct: 347 HG-GHCRNCADNTDGPKCERCLANYYREASGQR-CLSCGCNPVG-SLSTQCDN-TGRCSC 402
Query: 136 QDNTQGKNCERCLPGYY 152
+ G C+RC PGY+
Sbjct: 403 KPGVMGDKCDRCQPGYH 419
Score = 158 (60.7 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 39/122 (31%), Positives = 55/122 (45%)
Query: 66 CLCNNHS-TCVHGIGICDECHDWTTGDHCQYCRAGSYGNAT--TQEGCRKCDCNSHGNSV 122
C CN HS TC G+C+ C T G C+ C+ G YG++T + C+ C C + +
Sbjct: 708 CNCNGHSDTCDPETGMCN-CQHNTAGLSCERCKDGFYGDSTVGSSSDCKACPCPA--GAT 764
Query: 123 LGVCDSITGECICQD---NTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGL 179
V T E +C + T GK CE C G++GDP C A P +
Sbjct: 765 CAVVPK-TNEVVCTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNNNIDPNAV 823
Query: 180 GS 181
G+
Sbjct: 824 GN 825
Score = 137 (53.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 66 CLCNNH------STCVHGIGICDECHDWTTGDHCQYCRAGSYGNA---TTQEGCRKCDCN 116
C CNN+ C G C +C T G C C+ G YG+A + C+ C C+
Sbjct: 812 CSCNNNIDPNAVGNCNRESGECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCS 871
Query: 117 SHGN-SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTG 173
+G C +TG+C C + ++C C G+Y + G C G G
Sbjct: 872 PYGTVDRQTACSQVTGQCPCLPHVINRDCGACELGFYNLQSGKGCERCNCNPIGSTNG 929
Score = 49 (22.3 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 308 NRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNHGT--CD 346
N C ++ QC C P TG C+ C F + G CD
Sbjct: 928 NGQCDIVSGQCECQPGVTGQHCER--CEVNFFGFSSSGCKPCD 968
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 316 CVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
C C P + +C + +C E ++ CD
Sbjct: 429 CSCNPAGSTQECDVQTGRCQCKENVDGFNCD 459
Score = 40 (19.1 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 19/75 (25%), Positives = 27/75 (36%)
Query: 261 CTEDMHRGYEVLEAKSGVMTIHYKQGKPSEGFNATYQIFSCPDKC-P----ENRT-C--I 312
C + + + +GV KQG + A P KC P + +T C +
Sbjct: 826 CNRESGECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQV 885
Query: 313 NNQCVCPPRRTGPDC 327
QC C P DC
Sbjct: 886 TGQCPCLPHVINRDC 900
Score = 37 (18.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 5/15 (33%), Positives = 8/15 (53%)
Query: 315 QCVCPPRRTGPDCQE 329
+C CP G C++
Sbjct: 673 KCTCPQGYLGQHCEQ 687
>UNIPROTKB|P22105 [details] [associations]
symbol:TNXB "Tenascin-X" species:9606 "Homo sapiens"
[GO:0005518 "collagen binding" evidence=IEA] [GO:0006631 "fatty
acid metabolic process" evidence=IEA] [GO:0006641 "triglyceride
metabolic process" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=IEA]
[GO:0043206 "extracellular fibril organization" evidence=IEA]
[GO:0043506 "regulation of JUN kinase activity" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=NAS]
[GO:0048251 "elastic fiber assembly" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0005583 "fibrillar collagen"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=ISS] [GO:0008201
"heparin binding" evidence=ISS] [GO:0032963 "collagen metabolic
process" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=ISS] [GO:0005178 "integrin binding"
evidence=ISS] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS;IDA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
INTERPRO:IPR020837 GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CH471081 GO:GO:0030036 SUPFAM:SSF49265
GO:GO:0005578 GO:GO:0030199 GO:GO:0008201 GO:GO:0007155
GO:GO:0006631 GO:GO:0005622 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0006641 GO:GO:0005178 GO:GO:0016337 PROSITE:PS01186
GO:GO:0007160 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 EMBL:U89337
EMBL:AL049547 EMBL:AL662828 EMBL:AL662884 EMBL:U52696
GermOnline:ENSG00000168477 GO:GO:0048251 GO:GO:0043206
GO:GO:0043506 Pfam:PF12661 EMBL:AF019413 EMBL:AL662849
EMBL:AL645922 MIM:130020 Orphanet:285 GO:GO:0032963 KO:K06252
MIM:600985 EMBL:U24488 EMBL:AL772248 EMBL:BC033740 EMBL:BC125114
EMBL:BC125115 EMBL:BC130037 EMBL:X71923 EMBL:Y13782 EMBL:Y13783
EMBL:AB209012 EMBL:M25813 IPI:IPI00025276 IPI:IPI00218639
IPI:IPI00895929 PIR:A40701 PIR:A42175 PIR:B42175 PIR:D42175
RefSeq:NP_061978.6 RefSeq:NP_115859.2 UniGene:Hs.485104 PDB:2CUH
PDB:2CUI PDB:2CUM PDBsum:2CUH PDBsum:2CUI PDBsum:2CUM
ProteinModelPortal:P22105 SMR:P22105 IntAct:P22105
PhosphoSite:P22105 DMDM:290457668 PRIDE:P22105 DNASU:7148
Ensembl:ENST00000375247 Ensembl:ENST00000451343
Ensembl:ENST00000546684 Ensembl:ENST00000550539 GeneID:7148
KEGG:hsa:7148 UCSC:uc003nzg.1 UCSC:uc003nzl.2 CTD:7148
GeneCards:GC06M032008 H-InvDB:HIX0165968 H-InvDB:HIX0207682
HGNC:HGNC:11976 HPA:CAB005373 MIM:606408 neXtProt:NX_P22105
Orphanet:230839 PharmGKB:PA36662 HOVERGEN:HBG006855
InParanoid:P22105 ChiTaRS:TNXB EvolutionaryTrace:P22105
GenomeRNAi:7148 NextBio:27974 Bgee:P22105 Genevestigator:P22105
Uniprot:P22105
Length = 4289
Score = 133 (51.9 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 48/161 (29%), Positives = 66/161 (40%)
Query: 29 FNASLCYNKCIYGYCKGP---PDYSCQCELGWTGVDCSV-NCL--CNNHSTCVHGIGICD 82
F C ++ G C+G D C C+ G++G DCS +C C C+ G +C+
Sbjct: 518 FTGEDCGSRRCPGDCRGHGLCEDGVCVCDAGYSGEDCSTRSCPGGCRGRGQCLDGRCVCE 577
Query: 83 ECHDWTTGDHCQYCRAGSYGNATTQEGCRKC--DCNSHGNSVLGVC----DSITGEC--- 133
D +G+ C G R+C DC+ HG GVC ++ +C
Sbjct: 578 ---DGYSGEDC---------------GVRQCPNDCSQHGVCQDGVCICWEGYVSEDCSIR 619
Query: 134 ICQDNTQGKN-CE--RCL--PGYYGDPTDGGTCYYQCMARG 169
C N G+ CE RCL PGY G C C RG
Sbjct: 620 TCPSNCHGRGRCEEGRCLCDPGYTGPTCATRMCPADCRGRG 660
Score = 131 (51.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 43/148 (29%), Positives = 60/148 (40%)
Query: 34 CYNKCIYGYCKGPP---DYSCQCELGWTGVDC-SVNCL--CNNHSTCVHGIGICDECHDW 87
C + G C+G D C C G+TG DC S C C H C G+ +CD +
Sbjct: 492 CGTRACPGDCRGRGRCVDGRCVCNPGFTGEDCGSRRCPGDCRGHGLCEDGVCVCDAGY-- 549
Query: 88 TTGDHC--QYCRAGSYGNATTQEGCRKCDC-NSHGNSVLGV--C-DSITGECICQDNTQG 141
+G+ C + C G G +G +C C + + GV C + + +CQD
Sbjct: 550 -SGEDCSTRSCPGGCRGRGQCLDG--RCVCEDGYSGEDCGVRQCPNDCSQHGVCQDGV-- 604
Query: 142 KNCERCLPGYYGDPTDGGTCYYQCMARG 169
C C GY + TC C RG
Sbjct: 605 --CI-CWEGYVSEDCSIRTCPSNCHGRG 629
Score = 125 (49.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 41/138 (29%), Positives = 54/138 (39%)
Query: 43 CKGP---PDYSCQCELGWTGVDCSV-NCL--CNNHSTCVHGIGICDECHDWT--TGDHC- 93
C+G D C C+ G++G DC V +C CN C G +C W TG C
Sbjct: 377 CRGRGRCEDGECICDTGYSGDDCGVRSCPGDCNQRGRCEDGRCVC-----WPGYTGTDCG 431
Query: 94 -QYCRAGSYGNATTQEGCRKCDCNS-HGNSVLGVCDSITGECICQDNTQGKNCERCLPGY 151
+ C G + G C CN+ + GV S G+C + + C C PGY
Sbjct: 432 SRACPRDCRGRGRCENGV--CVCNAGYSGEDCGV-RSCPGDCRGRGRCESGRC-MCWPGY 487
Query: 152 YGDPTDGGTCYYQCMARG 169
G C C RG
Sbjct: 488 TGRDCGTRACPGDCRGRG 505
Score = 118 (46.6 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 43/146 (29%), Positives = 60/146 (41%)
Query: 34 CYNKCIY-GYCKGPPDYSCQCELGWTGVDCSV-NCL--CNNHSTCVHGIGICDECHDWTT 89
C C G C+G C C+ G+TG DC + +C C+ C +G +C+ + T
Sbjct: 249 CPRGCSQRGRCEGG---RCVCDPGYTGDDCGMRSCPRGCSQRGRCENGRCVCNPGY---T 302
Query: 90 GDHC--QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE-- 145
G+ C + C G ++G CD G C T C D +G C
Sbjct: 303 GEDCGVRSCPRGCSQRGRCKDGRCVCDPGYTGED----CG--TRSCPW-DCGEGGRCVDG 355
Query: 146 RCL--PGYYGDPTDGGTCYYQCMARG 169
RC+ PGY G+ TC C RG
Sbjct: 356 RCVCWPGYTGEDCSTRTCPRDCRGRG 381
Score = 114 (45.2 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 35/126 (27%), Positives = 49/126 (38%)
Query: 51 CQCELGWTGVDCSVNCL---CNNHSTCVHGIGICDECHDWTTGDHC--QYCRAGSYGNAT 105
C C G+TG DC C CV G +C+ TG+ C + C G+
Sbjct: 481 CMCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCNPGF---TGEDCGSRRCPGDCRGHGL 537
Query: 106 TQEGCRKCDCNSHGN-----SVLGVC----DSITGECICQDNTQGKNCE-RCLPGYYGDP 155
++G CD G S G C + G C+C+D G++C R P D
Sbjct: 538 CEDGVCVCDAGYSGEDCSTRSCPGGCRGRGQCLDGRCVCEDGYSGEDCGVRQCPN---DC 594
Query: 156 TDGGTC 161
+ G C
Sbjct: 595 SQHGVC 600
Score = 114 (45.2 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 35/128 (27%), Positives = 53/128 (41%)
Query: 34 CYNKCIYGYCKGPP---DYSCQCELGWTGVDCSVN-CL--CNNHSTCVHGIGICDECHDW 87
C + G C+G D C CE G++G DC V C C+ H C G+ IC E +
Sbjct: 554 CSTRSCPGGCRGRGQCLDGRCVCEDGYSGEDCGVRQCPNDCSQHGVCQDGVCICWEGY-- 611
Query: 88 TTGDHCQY--CRAGSYGNATTQEGCRKCDCNSHGNS-VLGVCDS--------ITGECICQ 136
+ C C + +G +EG CD G + +C + + G C+C
Sbjct: 612 -VSEDCSIRTCPSNCHGRGRCEEGRCLCDPGYTGPTCATRMCPADCRGRGRCVQGVCLCH 670
Query: 137 DNTQGKNC 144
G++C
Sbjct: 671 VGYGGEDC 678
Score = 112 (44.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
SCP C E C++ +CVC P TG DC CP +C G C+
Sbjct: 341 SCPWDCGEGGRCVDGRCVCWPGYTGEDCSTRTCPRDCR---GRGRCE 384
Score = 111 (44.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+CP C C++ +CVC P TG DC CP +C HG C+
Sbjct: 496 ACPGDCRGRGRCVDGRCVCNPGFTGEDCGSRRCPGDCR---GHGLCE 539
Score = 108 (43.1 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 43/136 (31%), Positives = 52/136 (38%)
Query: 50 SCQCELGWTGVDCSVNCLCN-NHSTCVHGIGIC-DECHDW--TTGDHCQYCRAGSYGNAT 105
+C CE GW G CS S+ G C D+C+D C C G G +
Sbjct: 155 TCSCEPGWGGPTCSDPTDAEIPPSSPPSASGSCPDDCNDQGRCVRGRC-VCFPGYTGPSC 213
Query: 106 TQEGCRKCDCNSHGNSVLGVCDSITG----ECI---CQDN-TQGKNCE--RCL--PGYYG 153
C DC G V GVC G +C C +Q CE RC+ PGY G
Sbjct: 214 GWPSCPG-DCQGRGRCVQGVCVCRAGFSGPDCSQRSCPRGCSQRGRCEGGRCVCDPGYTG 272
Query: 154 DPTDGGTCYYQCMARG 169
D +C C RG
Sbjct: 273 DDCGMRSCPRGCSQRG 288
Score = 106 (42.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SCP C C++ +CVC +G DC CPN+C + HG C
Sbjct: 558 SCPGGCRGRGQCLDGRCVCEDGYSGEDCGVRQCPNDCSQ---HGVC 600
Score = 106 (42.4 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 49/170 (28%), Positives = 66/170 (38%)
Query: 51 CQCELGWTGVDCS-VNCL--CNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQ 107
C C G+TG C +C C CV G+ C CRAG G +Q
Sbjct: 202 CVCFPGYTGPSCGWPSCPGDCQGRGRCVQGV--------------C-VCRAGFSGPDCSQ 246
Query: 108 EGCRKCDCNSHGNSVLG--VCD-SITGE-C---ICQDN-TQGKNCE--RCL--PGYYGDP 155
C + C+ G G VCD TG+ C C +Q CE RC+ PGY G+
Sbjct: 247 RSCPR-GCSQRGRCEGGRCVCDPGYTGDDCGMRSCPRGCSQRGRCENGRCVCNPGYTGED 305
Query: 156 TDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKDTPSRECLWIIGQ 205
+C C RG G + + + G+D +R C W G+
Sbjct: 306 CGVRSCPRGCSQRGRCKD------GRCVCDPG-YTGEDCGTRSCPWDCGE 348
Score = 105 (42.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
SCP C + C + +CVC P TG DC CP +C G C+
Sbjct: 403 SCPGDCNQRGRCEDGRCVCWPGYTGTDCGSRACPRDCR---GRGRCE 446
Score = 104 (41.7 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 290 EGF-NATYQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCDLL 348
EG+ + I +CP C C +C+C P TGP C +CP +C G C
Sbjct: 609 EGYVSEDCSIRTCPSNCHGRGRCEEGRCLCDPGYTGPTCATRMCPADCR---GRGRC--- 662
Query: 349 LTGVHITH 356
+ GV + H
Sbjct: 663 VQGVCLCH 670
Score = 103 (41.3 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 19/46 (41%), Positives = 22/46 (47%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SCP C + C N +CVC P TG DC CP C + G C
Sbjct: 279 SCPRGCSQRGRCENGRCVCNPGYTGEDCGVRSCPRGCSQ---RGRC 321
Score = 102 (41.0 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 42/174 (24%), Positives = 66/174 (37%)
Query: 34 CYNKCIY-GYCKGPPDYSCQCELGWTGVDC-SVNCL--CNNHSTCVHGIGICDECHDWTT 89
C C G C+ D C C G+TG DC S C C C +G+ +C+ + +
Sbjct: 404 CPGDCNQRGRCE---DGRCVCWPGYTGTDCGSRACPRDCRGRGRCENGVCVCNAGY---S 457
Query: 90 GDHC--QYCRAGSYGNATTQEGCRKCDC-NSHGNSVLGVCDSITGECICQDNTQGKNCER 146
G+ C + C G + G +C C + G + G+C + C
Sbjct: 458 GEDCGVRSCPGDCRGRGRCESG--RCMCWPGYTGRDCGT-RACPGDCRGRGRCVDGRCV- 513
Query: 147 CLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNA-WEGKDTPSREC 199
C PG+ G+ C C G+ G+ +A + G+D +R C
Sbjct: 514 CNPGFTGEDCGSRRCPGDCRGHGLCE--------DGVCVCDAGYSGEDCSTRSC 559
Score = 101 (40.6 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHE 338
SCP C + C + +CVC P TG DC CP +C E
Sbjct: 310 SCPRGCSQRGRCKDGRCVCDPGYTGEDCGTRSCPWDCGE 348
Score = 94 (38.1 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 17/46 (36%), Positives = 20/46 (43%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
+CP C C QCVC GPDC + CP +C G C
Sbjct: 687 ACPGGCGPRELCRAGQCVCVEGFRGPDCAIQTCPGDCR---GRGEC 729
Score = 94 (38.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
SCP C C + +C+C P TG DC CP +C G C
Sbjct: 465 SCPGDCRGRGRCESGRCMCWPGYTGRDCGTRACPGDCR---GRGRC 507
Score = 89 (36.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
CP+ C ++ C + C+C DC CP+ CH G C+
Sbjct: 590 CPNDCSQHGVCQDGVCICWEGYVSEDCSIRTCPSNCH---GRGRCE 632
Score = 88 (36.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+CP C C + +C+C +G DC CP +C++ G C+
Sbjct: 372 TCPRDCRGRGRCEDGECICDTGYSGDDCGVRSCPGDCNQ---RGRCE 415
Score = 86 (35.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTCD 346
+CP C C N CVC +G DC CP +C G C+
Sbjct: 434 ACPRDCRGRGRCENGVCVCNAGYSGEDCGVRSCPGDCR---GRGRCE 477
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CP C + C + CVC +G DC CP C G C
Sbjct: 528 CPGDCRGHGLCEDGVCVCDAGYSGEDCSTRSCPGGCR---GRGQC 569
Score = 74 (31.1 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 17/55 (30%), Positives = 21/55 (38%)
Query: 290 EGFNAT-YQIFSCPDKCPENRTCINNQCVCPPRRTGPDCQEEICPNECHEFLNHG 343
EGF I +CP C C + CVC G DC E P+ + G
Sbjct: 707 EGFRGPDCAIQTCPGDCRGRGECHDGSCVCKDGYAGEDCGEARVPSSASAYDQRG 761
Score = 72 (30.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 18/52 (34%), Positives = 20/52 (38%)
Query: 301 CPDKCPENRTCINNQCVCPPRRTGPDC-QEE----ICPNEC--HEFLNHGTC 345
CP C C+ C+C G DC QEE CP C E G C
Sbjct: 652 CPADCRGRGRCVQGVCLCHVGYGGEDCGQEEPPASACPGGCGPRELCRAGQC 703
>RGD|628777 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10116 "Rattus norvegicus" [GO:0002142 "stereocilia ankle
link complex" evidence=ISO] [GO:0005518 "collagen binding"
evidence=ISO] [GO:0005578 "proteinaceous extracellular matrix"
evidence=NAS] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO] [GO:0017022 "myosin binding" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=ISO] [GO:0045494
"photoreceptor cell maintenance" evidence=ISO] [GO:0048496
"maintenance of organ identity" evidence=ISO] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0050953 "sensory perception of light
stimulus" evidence=ISO] [GO:0060113 "inner ear receptor cell
differentiation" evidence=ISO] [GO:0060171 "stereocilium membrane"
evidence=ISO] [GO:0001917 "photoreceptor inner segment"
evidence=IDA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
RGD:628777 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007601
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0050896 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007605 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:7399
eggNOG:NOG245744 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AY077844 IPI:IPI00202312 RefSeq:NP_001231686.1
RefSeq:NP_742045.2 UniGene:Rn.200477 ProteinModelPortal:Q8K3K1
STRING:Q8K3K1 PhosphoSite:Q8K3K1 PRIDE:Q8K3K1 GeneID:289369
KEGG:rno:289369 UCSC:RGD:628777 NextBio:629723
Genevestigator:Q8K3K1 Uniprot:Q8K3K1
Length = 1512
Score = 176 (67.0 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 45/148 (30%), Positives = 71/148 (47%)
Query: 41 GYCKGPPDYS---C-QCELGWTGV--DCSVNCL-CNNHST-CVHGIGICDE------CHD 86
G C P C +C+ G+ + + S CL CN T V+G +CD+ C
Sbjct: 809 GQCVCKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKL 868
Query: 87 WTTGDHCQYCRAGSYGNATTQ--EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNC 144
TG C C+ + N T +GC+ CDC+S G + +CD ++G+C+C + Q + C
Sbjct: 869 GVTGLRCHQCKPHRF-NLTMDNPQGCQACDCDSLGTLLGSMCDPVSGQCLCLPHRQERRC 927
Query: 145 ERCLPGYYGDPTDGGTCYYQCMARGMLT 172
+C PG Y P++ C C+ + T
Sbjct: 928 VQCQPGCYSSPSNATGCL-PCLCHTVAT 954
Score = 175 (66.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 38/116 (32%), Positives = 54/116 (46%)
Query: 52 QCELGWTGV-----DCSVNCLCNNHST------CVHGIGICDECHDWTTGDHCQYCRAG- 99
+C +G+ G+ DC C CN T C H G C C G C C G
Sbjct: 671 RCHIGFYGLQALDPDCCRPCDCNPSGTVDGDITCHHNSGQCS-CKANVIGLRCDRCSFGF 729
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDP 155
+ + +GC C CN HG SV +CD ++G+C+C+ +G C+ C +YG P
Sbjct: 730 KFLRSLNADGCEPCHCNLHG-SVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLP 784
Score = 162 (62.1 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 36/105 (34%), Positives = 50/105 (47%)
Query: 77 GIGICDECHDWTTGDHCQYCRAGSY----GNATTQEGCRKCDCNSHG--NSVLGVCDSIT 130
G G+CD+C TTG +C+ C+ Y + E C+ CDCN G N L +CD +
Sbjct: 597 GGGVCDDCQHHTTGRNCESCQDYFYRPIGADPADPEVCKHCDCNRDGTRNGSL-LCDLVG 655
Query: 131 GECICQDNTQGKNCERCLPGYYG-DPTDGGTCY-YQCMARGMLTG 173
+C C+ G+ C RC G+YG D C C G + G
Sbjct: 656 DQCDCKRRVSGRRCFRCHIGFYGLQALDPDCCRPCDCNPSGTVDG 700
Score = 161 (61.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 37/114 (32%), Positives = 46/114 (40%)
Query: 66 CLCNNHST----CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNS 121
C CN H + C G C C G C CR YG C CDCN G
Sbjct: 743 CHCNLHGSVNQLCDPLSGQC-VCKKEAKGLRCDVCRENFYG--LPWSACEVCDCNRAGTQ 799
Query: 122 VLGVCDSITGECICQDNTQGKNCERCLPGYYG-DPTDGGTCY-YQCMARGMLTG 173
VCD+ TG+C+C+ + G+ C C GY+ D C C G + G
Sbjct: 800 AGTVCDAETGQCVCKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNG 853
Score = 143 (55.4 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 40/120 (33%), Positives = 55/120 (45%)
Query: 43 CKGPPDYSCQCELGWTGVDCSV--NCLCNNHSTCVHGIGICD------ECHDWTTGDHCQ 94
C+ DY + +G D V +C CN T +G +CD +C +G C
Sbjct: 613 CESCQDYFYR-PIGADPADPEVCKHCDCNRDGTR-NGSLLCDLVGDQCDCKRRVSGRRCF 670
Query: 95 YCRAGSYG-NATTQEGCRKCDCNSHGNSVLG--VCDSITGECICQDNTQGKNCERCLPGY 151
C G YG A + CR CDCN G +V G C +G+C C+ N G C+RC G+
Sbjct: 671 RCHIGFYGLQALDPDCCRPCDCNPSG-TVDGDITCHHNSGQCSCKANVIGLRCDRCSFGF 729
Score = 135 (52.6 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 42/141 (29%), Positives = 63/141 (44%)
Query: 66 CLCNNHST--CV-HGI-GICDECHD-WTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGN 120
CLC+ +T C+ + + G C C D TTG C+ + CR C C+ G
Sbjct: 947 CLCHTVATKNCICNSVTGHC-YCPDPSTTGLSWHQCQDRYFRFDPLTGRCRPCHCHVAGA 1005
Query: 121 SVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQG-L 179
S G CD++TG+C C++ G C+ C+PG D C ++ P P+G +
Sbjct: 1006 SN-GTCDAVTGQCFCKEFVTGSKCDTCVPG--ASHLDVNNLL-AC-SKTPSQQPPPRGRV 1060
Query: 180 GSGLAERNAWEGKDTPSRECL 200
S A +W D P+ L
Sbjct: 1061 QSSSAINLSWSPPDFPNAHWL 1081
Score = 47 (21.6 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 308 NRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNH 342
N TC + QC C TG C + P H +N+
Sbjct: 1007 NGTCDAVTGQCFCKEFVTGSKC-DTCVPGASHLDVNN 1042
Score = 45 (20.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 312 INNQCVCPPRRTGPDCQEEICPNECHEFLNHGT 344
++ QC+C P R C + C C+ ++ T
Sbjct: 912 VSGQCLCLPHRQERRCVQ--CQPGCYSSPSNAT 942
Score = 43 (20.2 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 315 QCVCPPRRTGPDCQE 329
QCVC P G C E
Sbjct: 810 QCVCKPSVGGRRCSE 824
Score = 43 (20.2 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 308 NRTC--INNQCVCPPRRTGPDCQEEIC 332
N+ C ++ QCVC G C ++C
Sbjct: 752 NQLCDPLSGQCVCKKEAKGLRC--DVC 776
Score = 37 (18.1 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 336 CHEFLNHGTCDLLLTGV-HI 354
C EF+ CD + G H+
Sbjct: 1019 CKEFVTGSKCDTCVPGASHL 1038
>MGI|MGI:1341292 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10090 "Mus musculus" [GO:0001917 "photoreceptor inner
segment" evidence=ISO] [GO:0002141 "stereocilia ankle link"
evidence=NAS] [GO:0002142 "stereocilia ankle link complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005518 "collagen binding" evidence=ISO;IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0017022 "myosin binding" evidence=IPI]
[GO:0032391 "photoreceptor connecting cilium" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=IDA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045494 "photoreceptor cell maintenance"
evidence=ISO;IMP] [GO:0048496 "maintenance of organ identity"
evidence=ISO] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050953 "sensory perception of light stimulus" evidence=ISO]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IMP]
[GO:0060171 "stereocilium membrane" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1341292 GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113 Pfam:PF02210
GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0002142 GO:GO:0048496 GO:GO:0060171
GeneTree:ENSGT00700000104042 CTD:7399 eggNOG:NOG245744
HOGENOM:HOG000124780 HOVERGEN:HBG094138 OMA:EIRIQAC
OrthoDB:EOG4B5P57 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AF151717 EMBL:DQ073638 EMBL:AC121799 EMBL:AC121892
EMBL:AC122122 EMBL:AC129312 EMBL:AC135863 EMBL:AC165230
IPI:IPI00720231 IPI:IPI00742431 IPI:IPI01007786 RefSeq:NP_067383.3
UniGene:Mm.331238 ProteinModelPortal:Q2QI47 STRING:Q2QI47
PhosphoSite:Q2QI47 PRIDE:Q2QI47 Ensembl:ENSMUST00000060479
GeneID:22283 KEGG:mmu:22283 UCSC:uc007eae.1 UCSC:uc007eaf.1
ChiTaRS:USH2A NextBio:302411 Bgee:Q2QI47 Genevestigator:Q2QI47
GermOnline:ENSMUSG00000026609 Uniprot:Q2QI47
Length = 5193
Score = 186 (70.5 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 45/138 (32%), Positives = 67/138 (48%)
Query: 41 GYCKGPPDYS---C-QCELGWTGV---DCSV--NCLCNNHSTCVHGIGICDE------CH 85
G C P+ C QC+ G+ + D + C C T V+G CD+ C
Sbjct: 810 GQCVCKPNVGGRQCSQCKAGYFNLYQNDSHLCLTCNCEKMGT-VNGSLRCDKSTGQCPCK 868
Query: 86 DWTTGDHCQYCRAGSYGNATTQ--EGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKN 143
TG C C+ + N T +GC+ CDC+S G +CD I+G+C+C + QG+
Sbjct: 869 LGVTGLRCHQCKPHRF-NLTMDNPQGCQACDCDSLGTLPGSMCDPISGQCLCLPHRQGRR 927
Query: 144 CERCLPGYYGDPTDGGTC 161
CE+C PG+Y P++ C
Sbjct: 928 CEQCQPGFYSSPSNATGC 945
Score = 172 (65.6 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 45/136 (33%), Positives = 60/136 (44%)
Query: 51 CQCELGWTG---VDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSY----GN 103
CQC G D SV+ H+ G G+CD+C TTG HC+ C+ Y +
Sbjct: 572 CQCH-GHASSCHYDASVDPFPLEHNR--GGGGVCDDCQHHTTGRHCESCQDYFYRPVGAD 628
Query: 104 ATTQEGCRKCDCNSHG--NSVLGVCDSITGECICQDNTQGKNCERCLPGYYG----DPTD 157
+ C+ CDCN G N L CD I G+C C+ G+ C +C G+Y DP
Sbjct: 629 PAAPDACKLCDCNRAGTRNGSLH-CDPIGGQCDCKRRVSGRQCLQCQDGFYDLQALDPDG 687
Query: 158 GGTCYYQCMARGMLTG 173
C C G + G
Sbjct: 688 CRPC--NCNPSGTVDG 701
Score = 166 (63.5 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 47/145 (32%), Positives = 61/145 (42%)
Query: 36 NKCIYGY-----CKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTG 90
N+C +G+ G CQC L G SVN LC+ S G C C G
Sbjct: 724 NRCNFGFKFLQSFNGDGCEPCQCNLH--G---SVNQLCDPLS------GQC-ACKKEAKG 771
Query: 91 DHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
C CR YG C CDC+ G+ VCD+ TG+C+C+ N G+ C +C G
Sbjct: 772 LKCDSCRENFYG--LPWSACEVCDCSKAGSQPGTVCDTETGQCVCKPNVGGRQCSQCKAG 829
Query: 151 YYG-DPTDGGTCYY-QCMARGMLTG 173
Y+ D C C G + G
Sbjct: 830 YFNLYQNDSHLCLTCNCEKMGTVNG 854
Score = 159 (61.0 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 50/156 (32%), Positives = 64/156 (41%)
Query: 10 LTTAKDDALSRCTVLLLYIFNASLCYNKCIYGYCKGPPDYS---C-QCELGW-----TGV 60
LT C L S+C I G C P C QC+ G+
Sbjct: 886 LTMDNPQGCQACDCDSLGTLPGSMC--DPISGQCLCLPHRQGRRCEQCQPGFYSSPSNAT 943
Query: 61 DCSVNCLCNNHSTCVH----GIGICDECHD-WTTGDHCQYCRAGSYGNATTQEG-CRKCD 114
C + CLC+ H G C CHD TTG C C+ SY G CR C
Sbjct: 944 GC-LPCLCHTAGAVSHICNSVTGQCS-CHDPSTTGRSCHQCQE-SYFRFDPLTGRCRPCH 1000
Query: 115 CNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPG 150
C+ G S G CD++TG+C C++ G C+ C+PG
Sbjct: 1001 CHVAGASN-GTCDAVTGQCFCKEFVTGSKCDTCVPG 1035
Score = 157 (60.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 39/121 (32%), Positives = 56/121 (46%)
Query: 56 GWTGVDC-SVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCD 114
G DC S+ L S C G C C G C+ C+ G Y + + GC C
Sbjct: 893 GCQACDCDSLGTLPG--SMCDPISGQC-LCLPHRQGRRCEQCQPGFYSSPSNATGCLPCL 949
Query: 115 CNSHGNSVLGVCDSITGECICQD-NTQGKNCERCLPGYYG-DPTDGGTCYYQCMARGMLT 172
C++ G +V +C+S+TG+C C D +T G++C +C Y+ DP G C G
Sbjct: 950 CHTAG-AVSHICNSVTGQCSCHDPSTTGRSCHQCQESYFRFDPLTGRCRPCHCHVAGASN 1008
Query: 173 G 173
G
Sbjct: 1009 G 1009
Score = 136 (52.9 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 41/119 (34%), Positives = 54/119 (45%)
Query: 62 CSVNCLCNNHST---CVH--GIG-ICDECHDWTTGDHCQYCRAGSYG-NATTQEGCRKCD 114
C + C CN T +H IG CD C +G C C+ G Y A +GCR C+
Sbjct: 635 CKL-CDCNRAGTRNGSLHCDPIGGQCD-CKRRVSGRQCLQCQDGFYDLQALDPDGCRPCN 692
Query: 115 CNSHGNSVLG--VCDSITGECICQDNTQGKNCERCLPGY-YGDPTDGGTCY-YQCMARG 169
CN G +V G C +G+C C+ N G C RC G+ + +G C QC G
Sbjct: 693 CNPSG-TVDGDITCHQNSGQCSCKANVIGLRCNRCNFGFKFLQSFNGDGCEPCQCNLHG 750
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 312 INNQCVCPPRRTGPDCQE 329
I+ QC+C P R G C++
Sbjct: 913 ISGQCLCLPHRQGRRCEQ 930
Score = 47 (21.6 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 308 NRTC--INNQCVCPPRRTGPDCQEEICPNECHEFLNH 342
N TC + QC C TG C + P H +N+
Sbjct: 1008 NGTCDAVTGQCFCKEFVTGSKC-DTCVPGASHLDVNN 1043
Score = 47 (21.6 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 15/66 (22%), Positives = 23/66 (34%)
Query: 134 ICQDNTQGKNCERCLPGYYGDPTDGGTCYYQCMARGMLTGPGPQGLGSGLAERNAWEGKD 193
+C + C G DP G +C C + + P G+ G WE +
Sbjct: 3170 VCGHTCYSPGTKVCCDGLLYDPQPGYSC---CEDKYIALSPNATGVCCG---GRMWEAQ- 3222
Query: 194 TPSREC 199
P +C
Sbjct: 3223 -PDHQC 3227
Score = 43 (20.2 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 315 QCVCPPRRTGPDCQE 329
QCVC P G C +
Sbjct: 811 QCVCKPNVGGRQCSQ 825
Score = 37 (18.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 296 YQIFSCPDK-CPENRTCINNQCVCPPRRTGPDCQEEICPNE 335
+ + C ++ C + I PP+ GP +I P E
Sbjct: 1215 FSVQGCTNESCFYSLPIIVTTAQAPPQTQGPPTVWKISPTE 1255
Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 336 CHEFLNHGTCDLLLTGV-HI 354
C EF+ CD + G H+
Sbjct: 1020 CKEFVTGSKCDTCVPGASHL 1039
>UNIPROTKB|O00634 [details] [associations]
symbol:NTN3 "Netrin-3" species:9606 "Homo sapiens"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0042692 "muscle cell
differentiation" evidence=TAS] [GO:0051149 "positive regulation of
muscle cell differentiation" evidence=TAS] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005794 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0005578 PROSITE:PS00022 GO:GO:0042692 GO:GO:0051149
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
eggNOG:NOG244580 HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 EMBL:U86759
EMBL:U86758 IPI:IPI00006193 RefSeq:NP_006172.1 UniGene:Hs.158336
ProteinModelPortal:O00634 SMR:O00634 STRING:O00634 PaxDb:O00634
PRIDE:O00634 Ensembl:ENST00000293973 GeneID:4917 KEGG:hsa:4917
UCSC:uc002cqj.3 CTD:4917 GeneCards:GC16P002521 HGNC:HGNC:8030
MIM:602349 neXtProt:NX_O00634 PharmGKB:PA164724231
InParanoid:O00634 KO:K06844 OMA:TASPLCW PhylomeDB:O00634
GenomeRNAi:4917 NextBio:18935 Bgee:O00634 CleanEx:HS_NTN3
Genevestigator:O00634 GermOnline:ENSG00000162068 Uniprot:O00634
Length = 580
Score = 175 (66.7 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 79 GICDECHDWTTGDHCQYCRAGSY---GNATT-QEGCRKCDCNSHGNSVLGVCDSITGECI 134
G+C C T G HC YCR G Y G A + + CR CDC+ G + C+ TG+C
Sbjct: 336 GVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVG-AAGKTCNQTTGQCP 394
Query: 135 CQDNTQGKNCERCLPGY 151
C+D G C RC PG+
Sbjct: 395 CKDGVTGLTCNRCAPGF 411
Score = 37 (18.1 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 6/12 (50%), Positives = 6/12 (50%)
Query: 51 CQCELGWTGVDC 62
C C G G DC
Sbjct: 274 CDCRHGTEGPDC 285
>UNIPROTKB|A4D0S4 [details] [associations]
symbol:LAMB4 "Laminin subunit beta-4" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
EMBL:CH236947 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:22798 eggNOG:NOG303831 KO:K06245
EMBL:AF028816 EMBL:AC005048 EMBL:BC045172 EMBL:BC140804
EMBL:BC142619 EMBL:AK075165 IPI:IPI00295437 IPI:IPI00852842
IPI:IPI00927194 RefSeq:NP_031382.2 UniGene:Hs.62022
ProteinModelPortal:A4D0S4 SMR:A4D0S4 IntAct:A4D0S4 STRING:A4D0S4
PhosphoSite:A4D0S4 PaxDb:A4D0S4 PRIDE:A4D0S4
Ensembl:ENST00000205386 Ensembl:ENST00000388780
Ensembl:ENST00000388781 Ensembl:ENST00000422975 GeneID:22798
KEGG:hsa:22798 UCSC:uc003vey.2 GeneCards:GC07M107663 HGNC:HGNC:6491
HPA:HPA020242 HPA:HPA024247 neXtProt:NX_A4D0S4 PharmGKB:PA30279
OMA:CHPQGSK OrthoDB:EOG46DM1W ChiTaRS:LAMB4 GenomeRNAi:22798
NextBio:43142 ArrayExpress:A4D0S4 Bgee:A4D0S4 CleanEx:HS_LAMB4
Genevestigator:A4D0S4 Uniprot:A4D0S4
Length = 1761
Score = 176 (67.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 53/158 (33%), Positives = 72/158 (45%)
Query: 37 KCIYGY----CKGPPDYSCQC-ELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGD 91
+CI GY G P C C + + + +C N S+ V IC+ C TG
Sbjct: 893 RCIDGYYGNPSSGQPCRPCLCPDDPSSNQYFAHSCYQNLWSSDV----ICN-CLQGYTGT 947
Query: 92 HCQYCRAGSYGNATTQEG-CRKCDCNSHGNSV-LGVCDSITGECI-CQDNTQGKNCERCL 148
C C G YGN C+ C CN++ + C +TGEC+ C NTQG NC+ C
Sbjct: 948 QCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLRCLHNTQGANCQLCK 1007
Query: 149 PGYYGDPTDGGTCYY-QCMARGMLTGPGPQGLGSGLAE 185
PG+YG + TC C A G+ P G G+ L +
Sbjct: 1008 PGHYGSALNQ-TCRRCSCHASGVSPMECPPGGGACLCD 1044
Score = 175 (66.7 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 36/100 (36%), Positives = 48/100 (48%)
Query: 61 DCSVNCLCNNH----STCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRKCDCN 116
D +V C C+ S+C G C +C G C C GSY GC C C+
Sbjct: 764 DGAVACKCHPQGSVGSSCSRLGGQC-QCKPLVVGRCCDRCSTGSYDLG--HHGCHPCHCH 820
Query: 117 SHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
G+ VCD +TG+C C G+ C+RCL GY+G P+
Sbjct: 821 PQGSKDT-VCDQVTGQCPCHGEVSGRRCDRCLAGYFGFPS 859
Score = 173 (66.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 39/110 (35%), Positives = 51/110 (46%)
Query: 54 ELGWTGVD-CSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGCRK 112
+LG G C + + + C G C CH +G C C AG +G + C
Sbjct: 808 DLGHHGCHPCHCHPQGSKDTVCDQVTGQCP-CHGEVSGRRCDRCLAGYFGFPS----CHP 862
Query: 113 CDCNSHGNSVLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTC 161
C CN +CD TG C C T G+NCERC+ GYYG+P+ G C
Sbjct: 863 CPCNRFAE----LCDPETGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPC 908
Score = 169 (64.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 36/107 (33%), Positives = 49/107 (45%)
Query: 49 YSC-QCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAGSYG-NATT 106
Y+C CE G C+ ++ G C C + G C C+ YG +AT
Sbjct: 390 YACIPCECDPDGTISGGICVSHSDPALGSVAGQC-LCKENVEGAKCDQCKPNHYGLSATD 448
Query: 107 QEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
GC+ CDCN G+ CD TG+C+C G +CE C GY+G
Sbjct: 449 PLGCQPCDCNPLGSLPFLTCDVDTGQCLCLSYVTGAHCEECTVGYWG 495
Score = 164 (62.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 45/136 (33%), Positives = 55/136 (40%)
Query: 30 NASLCYNKCIYGYCKGPPDYSCQCEL-GWTGVDCSVN---CLCNNHSTCVHGIGICDECH 85
N LC YG C C G + ++C CLC+ + G C C
Sbjct: 1002 NCQLC-KPGHYGSALNQTCRRCSCHASGVSPMECPPGGGACLCDPVT------GACP-CL 1053
Query: 86 DWTTGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
TG C C G Y N GC+ CDC+ S CD +TG+C C+ GK C
Sbjct: 1054 PNVTGLACDRCADG-YWNLVPGRGCQSCDCDPR-TSQSSHCDQLTGQCPCKLGYGGKRCS 1111
Query: 146 RCLPGYYGDPTDGGTC 161
C YYGDP G C
Sbjct: 1112 ECQENYYGDPP--GRC 1125
Score = 162 (62.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 46/145 (31%), Positives = 61/145 (42%)
Query: 37 KCIYGYCKGPPDY--SCQCELGWTGVDCS-VNCLCNNHSTCVHGIGICDECHDWTTGDHC 93
KC CK P Y S LG DC+ + L TC G C C + TG HC
Sbjct: 433 KC--DQCK-PNHYGLSATDPLGCQPCDCNPLGSL--PFLTCDVDTGQC-LCLSYVTGAHC 486
Query: 94 QYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYG 153
+ C G +G GC CDC+ G + VC G+C C+ + G++C PGY+
Sbjct: 487 EECTVGYWGLGNHLHGCSPCDCDI-GGAYSNVCSPKNGQCECRPHVTGRSCSEPAPGYFF 545
Query: 154 DPTDGGTCYYQCMARGMLTGPGPQG 178
P + Y+ L G P G
Sbjct: 546 APLN--FYLYEAEEATTLQGLAPLG 568
Score = 149 (57.5 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 37/134 (27%), Positives = 53/134 (39%)
Query: 52 QCELGWTGVDCSVNCLCNNHST-CVHGIGICDECHDWTTGDHCQYCRAGSYGNATTQEGC 110
+C G+ G C CN + C G C C +TTG +C+ C G YGN ++ + C
Sbjct: 849 RCLAGYFGFPSCHPCPCNRFAELCDPETGSCFNCGGFTTGRNCERCIDGYYGNPSSGQPC 908
Query: 111 RKCDC--NSHGNSVLG-VC-DSITGE---CICQDNTQGKNCERCLPGYYGDPTDGGTCYY 163
R C C + N C ++ C C G C C G+YG+P G
Sbjct: 909 RPCLCPDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQ 968
Query: 164 QCMARGMLTGPGPQ 177
C + P+
Sbjct: 969 PCACNNNIDVTDPE 982
Score = 143 (55.4 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 38/125 (30%), Positives = 52/125 (41%)
Query: 33 LCYNKCIYGYCKGPPDYSCQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDH 92
L ++C GY P CQ DC ++H C G C C G
Sbjct: 1059 LACDRCADGYWNLVPGRGCQ------SCDCDPRTSQSSH--CDQLTGQCP-CKLGYGGKR 1109
Query: 93 CQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYY 152
C C+ YG+ + C CDCN G +CD TG C C++ G+ C+RC G+
Sbjct: 1110 CSECQENYYGDPPGR--CIPCDCNRAGTQK-PICDPDTGMCRCREGVSGQRCDRCARGHS 1166
Query: 153 GD-PT 156
+ PT
Sbjct: 1167 QEFPT 1171
Score = 126 (49.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 36/106 (33%), Positives = 51/106 (48%)
Query: 75 VHGIGICDECHDWTTGDHCQYCR-----AGSYGNATTQEG-CRKCDCNSHGN-------S 121
VHG +C H+ T G +C+ C+ A A Q+ CR C CNSH + +
Sbjct: 291 VHGQCVCQ--HN-TDGPNCERCKDFFQDAPWRPAADLQDNACRSCSCNSHSSRCHFDMTT 347
Query: 122 VLGVCDSITGECI-CQDNTQGKNCERCLPGYYGDPTDGGTCYYQCM 166
L G C CQ NT+G++C+RC P +Y DP + Y C+
Sbjct: 348 YLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYACI 393
Score = 52 (23.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 313 NNQCVCPPRRTGPDCQE 329
N QC C P TG C E
Sbjct: 522 NGQCECRPHVTGRSCSE 538
Score = 44 (20.5 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 285 QGKPSE-GFNATYQIFSCPDKC-PENR----TCI--NNQCVCPPRRTGPDCQE 329
Q KP+ G +AT + P C P TC QC+C TG C+E
Sbjct: 436 QCKPNHYGLSATDPLGCQPCDCNPLGSLPFLTCDVDTGQCLCLSYVTGAHCEE 488
Score = 43 (20.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 312 INNQCVCPPRRTGPDCQEEICPNECHEFLNHG 343
+ QC C P G C C ++ +HG
Sbjct: 784 LGGQCQCKPLVVGRCCDR--CSTGSYDLGHHG 813
Score = 41 (19.5 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 16/55 (29%), Positives = 19/55 (34%)
Query: 284 KQGKPSEGFNATYQIFSC------PDKCPENR-TC----INNQCVCPPRRTGPDC 327
K G N T + SC P +CP C + C C P TG C
Sbjct: 1007 KPGHYGSALNQTCRRCSCHASGVSPMECPPGGGACLCDPVTGACPCLPNVTGLAC 1061
Score = 38 (18.4 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 317 VCPPRRTGPDCQEEICPNECHE 338
VC P+ +C+ + C E
Sbjct: 517 VCSPKNGQCECRPHVTGRSCSE 538
>UNIPROTKB|E2RRE4 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:AAEX03000816 Ensembl:ENSCAFT00000006331 Uniprot:E2RRE4
Length = 489
Score = 169 (64.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 79 GICDECHDWTTGDHCQYCRAGSYGNA----TTQEGCRKCDCNSHGNSVLGVCDSITGECI 134
G+C+ C T G HC YC+ G + + T+++ CR C C+ G + G+C+ +G+C
Sbjct: 237 GVCERCRHHTAGRHCHYCQPGFWRDPGQPITSRKACRACQCHPIG-ATGGICNQTSGQCS 295
Query: 135 CQDNTQGKNCERCLPGY 151
C+ G C RC PGY
Sbjct: 296 CKLGVTGLTCNRCGPGY 312
>UNIPROTKB|E1BMG7 [details] [associations]
symbol:ODZ3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] InterPro:IPR000742
InterPro:IPR009471 Pfam:PF06484 PROSITE:PS50026 PROSITE:PS51361
SMART:SM00181 GO:GO:0016021 GO:GO:0007165 Gene3D:2.120.10.30
InterPro:IPR011042 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR008969 SUPFAM:SSF49464
InterPro:IPR006530 TIGRFAMs:TIGR01643 GeneTree:ENSGT00660000095277
InterPro:IPR022385 TIGRFAMs:TIGR03696 OMA:SPKGMAV EMBL:DAAA02060140
EMBL:DAAA02060138 EMBL:DAAA02060139 IPI:IPI00923853
Ensembl:ENSBTAT00000061514 ArrayExpress:E1BMG7 Uniprot:E1BMG7
Length = 2546
Score = 160 (61.4 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 46/139 (33%), Positives = 58/139 (41%)
Query: 33 LCYNKC-IYGYCKGPPDYSCQCELGWTGVDCSVN-C--LCNNHSTCVHGIGICDECHDWT 88
+C C +G C G SC+CE GWTG C+ C C H TC G C EC
Sbjct: 511 ICSVDCGSHGVCMGG---SCRCEEGWTGPACNQRACHPRCAEHGTCKDGK--C-ECSQGW 564
Query: 89 TGDHCQYCRAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCL 148
G+HC Y + +EGC CNS+G L D C+CQ +G C+ +
Sbjct: 565 NGEHCTIAH---YLDKIVKEGCPGL-CNSNGRCTL---DQNGWHCVCQPGWRGAGCDVAM 617
Query: 149 PGYYGDPTDG-GTCYYQCM 166
D D G CM
Sbjct: 618 ETLCTDSKDNEGDGLIDCM 636
Score = 130 (50.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 50 SCQCELGWTGVDCS-VNCL---CNNHSTCVHGIGICDECH---DWTTGDHCQY----C-- 96
SC C G+ G +C +CL C+NH C+HG ECH W G++C+ C
Sbjct: 428 SCACNSGYKGENCEEADCLDPGCSNHGVCIHG-----ECHCNPGWG-GNNCEILKTMCPD 481
Query: 97 RAGSYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCERCLPGYYGDPT 156
+ +G + G CD N G S+ +C G +C RC G+ G
Sbjct: 482 QCSGHGTYLQESGSCTCDPNWTGPDCSNEICSV--DCGSHGVCMGGSC-RCEEGWTGPAC 538
Query: 157 DGGTCYYQCMARG 169
+ C+ +C G
Sbjct: 539 NQRACHPRCAEHG 551
Score = 120 (47.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 39/106 (36%), Positives = 42/106 (39%)
Query: 43 CKGPPDYS---CQCELGWTGVDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQYCRAG 99
C G YS C C GW G +C V C G GIC G C C +G
Sbjct: 384 CSGNGQYSKGRCLCFSGWKGTECDVPTTQCIDPQC-GGRGIC------IMGS-CA-CNSG 434
Query: 100 SYGNATTQEGCRKCDCNSHGNSVLGVCDSITGECICQDNTQGKNCE 145
G E C + DC G S GVC I GEC C G NCE
Sbjct: 435 YKG-----ENCEEADCLDPGCSNHGVC--IHGECHCNPGWGGNNCE 473
Score = 111 (44.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 301 CPDKCPENRTCI--NNQCVCPPRRTGPDCQEEICPNECHEFLNHGTC 345
CPD+C + T + + C C P TGPDC EIC +C +HG C
Sbjct: 479 CPDQCSGHGTYLQESGSCTCDPNWTGPDCSNEICSVDCG---SHGVC 522
Score = 75 (31.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 36/126 (28%), Positives = 48/126 (38%)
Query: 60 VDCSVNCLCNNHSTCVHGIGICDECHDWTTGDHCQY--CRAGSYGNATTQEG-C------ 110
V+C NC + + CV G C C G C C GN +G C
Sbjct: 347 VECPRNC--HGNGECVSGT--C-HCFPGFLGPDCSRAACPVLCSGNGQYSKGRCLCFSGW 401
Query: 111 --RKCD-----CNSHGNSVLGVCDSITGECICQDNTQGKNCER--CL-PGYYGDPTDGGT 160
+CD C G+C I G C C +G+NCE CL PG ++ G
Sbjct: 402 KGTECDVPTTQCIDPQCGGRGIC--IMGSCACNSGYKGENCEEADCLDPGC----SNHGV 455
Query: 161 CYY-QC 165
C + +C
Sbjct: 456 CIHGEC 461
Score = 66 (28.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 300 SCPDKCPENRTCINNQCVCPPRRTGPDCQ---------EEICPNECHEFLNHGTCDLLLT 350
+C +C E+ TC + +C C G C +E CP C+ ++G C L
Sbjct: 542 ACHPRCAEHGTCKDGKCECSQGWNGEHCTIAHYLDKIVKEGCPGLCN---SNGRCTLDQN 598
Query: 351 GVH 353
G H
Sbjct: 599 GWH 601
Score = 56 (24.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 14/39 (35%), Positives = 16/39 (41%)
Query: 301 CPDKCPENRTCINNQ----CVCPPRRTGPDCQ---EEIC 332
CP C N C +Q CVC P G C E +C
Sbjct: 583 CPGLCNSNGRCTLDQNGWHCVCQPGWRGAGCDVAMETLC 621
WARNING: HSPs involving 367 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.481 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 377 377 0.00089 117 3 12 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 617
No. of states in DFA: 609 (65 KB)
Total size of DFA: 234 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.74u 0.13s 25.87t Elapsed: 00:00:02
Total cpu time: 26.03u 0.14s 26.17t Elapsed: 00:00:02
Start: Thu Aug 15 16:34:46 2013 End: Thu Aug 15 16:34:48 2013
WARNINGS ISSUED: 2