BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9822
(380 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9QYP0|MEGF8_RAT Multiple epidermal growth factor-like domains protein 8 OS=Rattus
norvegicus GN=Megf8 PE=2 SV=2
Length = 2788
Score = 242 bits (618), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 185/338 (54%), Gaps = 30/338 (8%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVL-GPHQ 98
CP C +C CL S G +GGW C WSS L +C+SPSY L C G CG +L GP
Sbjct: 2000 CPTPCHLLPNCTSCLASKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGCGRLLRGPES 2059
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTEGSLNSPSSGPESSTCDILF 158
C C+ TQC+ CLR HCGWCA GG C EG L+ P G TC
Sbjct: 2060 ---CSLGCAQATQCALCLRRPHCGWCAWGGQDGGGH--CMEGGLSGPRDG---LTC---- 2107
Query: 159 YQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYN 218
SW ++ CPPE+EC N HH C+ +++ C D G+EC C GY
Sbjct: 2108 ------------GRPGASWAFLSCPPEDECANGHHDCN-ETQNCHDQPHGYECSCKTGYT 2154
Query: 219 KSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL 278
G C PVC+QGCV G C EPD C+C FG+VG NCS +C+CN H++CAG D CL
Sbjct: 2155 MDNVTGVCRPVCAQGCVNGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDHCL 2214
Query: 279 RCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCIN-ASLASLPFSPE--SG 335
C NHTKG C++C PL+VG G C PC +C G++ +C++ L PE S
Sbjct: 2215 LCRNHTKGSHCEQCLPLFVGSALGGGTCRPCHAFCRGNSHVCVSRKELEMARREPEKYSL 2274
Query: 336 GTSELAAFLDEGPTT-RARCMHCGNHTTGPKCEDCVEG 372
E+ A++ EGP+ A C++C N++ G +CE C+ G
Sbjct: 2275 DPEEIEAWVAEGPSEDEAVCVNCQNNSYGDRCESCLHG 2312
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 260 CQCNGHADCAGP--DKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
CQCNGH D D L C +HT+G C C P Y GDPR G C C G
Sbjct: 1211 CQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQICSPGYYGDPRAGGSCF---RECGGRA 1267
Query: 318 GLCINASLA 326
L +S+A
Sbjct: 1268 LLTNVSSVA 1276
>sp|Q7Z7M0|MEGF8_HUMAN Multiple epidermal growth factor-like domains protein 8 OS=Homo
sapiens GN=MEGF8 PE=1 SV=2
Length = 2845
Score = 241 bits (615), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 185/338 (54%), Gaps = 30/338 (8%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVL-GPHQ 98
CP C +C CL S G +GGW C WSS L +C+SPSY L C G CG +L GP
Sbjct: 2057 CPTPCHLLPNCTSCLDSKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGCGRLLRGPES 2116
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTEGSLNSPSSGPESSTCDILF 158
C C+ TQC+ CLR HCGWCA GG C EG L+ P G TC
Sbjct: 2117 ---CSLGCAQATQCALCLRRPHCGWCAWGGQDGGGR--CMEGGLSGPRDG---LTC---- 2164
Query: 159 YQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYN 218
SW ++ CPPE+EC N HH C+ +++ C D G+EC C GY
Sbjct: 2165 ------------GRPGASWAFLSCPPEDECANGHHDCN-ETQNCHDQPHGYECSCKTGYT 2211
Query: 219 KSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL 278
G C PVC+QGCV G C EPD C+C FG+VG NCS +C+CN H++CAG D CL
Sbjct: 2212 MDNMTGLCRPVCAQGCVNGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDHCL 2271
Query: 279 RCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCIN-ASLASLPFSPE--SG 335
C NHTKG C++C PL+VG G C PC +C G++ +CI+ L P+ S
Sbjct: 2272 LCRNHTKGSHCEQCLPLFVGSAVGGGTCRPCHAFCRGNSHICISRKELQMSKGEPKKYSL 2331
Query: 336 GTSELAAFLDEGPTT-RARCMHCGNHTTGPKCEDCVEG 372
E+ ++ EGP+ A C++C N++ G KCE C++G
Sbjct: 2332 DPEEIENWVTEGPSEDEAVCVNCQNNSYGEKCESCLQG 2369
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 260 CQCNGHADCAGP--DKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
CQCNGH D D L C +HT+G C C P Y GDPR G C C G
Sbjct: 1211 CQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGGSCF---RECGGRA 1267
Query: 318 GLCINASLA 326
L +S+A
Sbjct: 1268 LLTNVSSVA 1276
>sp|P60882|MEGF8_MOUSE Multiple epidermal growth factor-like domains protein 8 OS=Mus
musculus GN=Megf8 PE=2 SV=2
Length = 2789
Score = 240 bits (613), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 184/338 (54%), Gaps = 30/338 (8%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVL-GPHQ 98
CP C +C CL S G +GGW C WSS L +C+SPSY L C G CG +L GP
Sbjct: 2001 CPTPCHLLPNCTSCLASKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGCGRLLRGPES 2060
Query: 99 APQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTEGSLNSPSSGPESSTCDILF 158
C C+ TQC+ CLR HCGWCA GG C EG L+ P G TC
Sbjct: 2061 ---CSLGCAQATQCALCLRRPHCGWCAWGGQDGGGH--CMEGGLSGPRDG---LTC---- 2108
Query: 159 YQTYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYN 218
SW ++ CPPE+EC N HH C+ +++ C D G+EC C GY
Sbjct: 2109 ------------GRPGASWAFLSCPPEDECANGHHDCN-ETQNCHDQPHGYECSCKTGYT 2155
Query: 219 KSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCL 278
G C PVC+QGCV G C EPD C+C FG+VG NCS +C+CN H++CAG D CL
Sbjct: 2156 MDNVTGVCRPVCAQGCVNGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGAQDHCL 2215
Query: 279 RCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCIN-ASLASLPFSPE--SG 335
C NHTKG C++C PL+VG G C PC +C G++ +C++ L PE S
Sbjct: 2216 LCRNHTKGSHCEQCLPLFVGSALGGGTCRPCHAFCRGNSHVCVSRKELEMARKEPEKYSL 2275
Query: 336 GTSELAAFLDEGPTT-RARCMHCGNHTTGPKCEDCVEG 372
E+ ++ EGP+ A C++C N++ G +CE C+ G
Sbjct: 2276 DPEEIETWVAEGPSEDEAVCVNCQNNSYGDRCESCLHG 2313
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 260 CQCNGHADCAGP--DKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHT 317
CQCNGH D D L C +HT+G C C P Y GDPR G C C G
Sbjct: 1211 CQCNGHGDPRRGHCDNLTGLCFCQDHTEGAHCQICSPGYYGDPRAGGSCF---RECGGRA 1267
Query: 318 GLCINASLA 326
L +S+A
Sbjct: 1268 LLTNVSSVA 1276
>sp|Q9WU60|ATRN_MOUSE Attractin OS=Mus musculus GN=Atrn PE=2 SV=3
Length = 1428
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 87/201 (43%), Gaps = 25/201 (12%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
+ C C RT C +C +SS EC W S + +C+ + Y A G +
Sbjct: 924 SAKQCRTPCALRTACGECTSSSS------ECMWCSNMKQCVDSN---AYVASFPFGQCME 974
Query: 96 PHQAPQCP-RSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTEGSLNSPSSGPESSTC 154
+ CP +CS Y CS CL CGWC +T G G C EGS P P ++
Sbjct: 975 WYTMSSCPPENCSGYCTCSHCLEQPGCGWCTDPSNT--GKGKCIEGSYKGPVKMPSQASA 1032
Query: 155 DILFYQTYPDQVIEVN---NNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGF 209
YP ++ + + ++W+++ C P +C N H C QS E+C DL G
Sbjct: 1033 G----NVYPQPLLNSSMCLEDSRYNWSFIHC-PACQC-NGHSKCINQSICEKCEDLTTGK 1086
Query: 210 EC-VCGRG-YNKSEEGGECVP 228
C C G Y GG+C P
Sbjct: 1087 HCETCISGFYGDPTNGGKCQP 1107
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 260 CQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGL 319
CQCNGH+ C +C +C + T G C+ C + GDP + G+C PC CNGH L
Sbjct: 1062 CQCNGHSKCINQS---ICEKCEDLTTGKHCETCISGFYGDPTNGGKCQPCK--CNGHASL 1116
Query: 320 C 320
C
Sbjct: 1117 C 1117
>sp|Q99J86|ATRN_RAT Attractin OS=Rattus norvegicus GN=Atrn PE=2 SV=1
Length = 1432
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 87/201 (43%), Gaps = 25/201 (12%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
+ C C RT C +C +SS EC W S + +C+ + Y A G +
Sbjct: 928 SAKQCRTPCALRTACGECTSSSS------ECMWCSNMKQCVDSN---AYVASFPFGQCME 978
Query: 96 PHQAPQCP-RSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTEGSLNSPSSGPESSTC 154
+ CP +CS Y CS CL CGWC +T G G C EGS P P ++
Sbjct: 979 WYTMSSCPPENCSGYCTCSHCLEQPGCGWCTDPSNT--GKGKCIEGSYKGPVKMPSHAST 1036
Query: 155 DILFYQTYPDQVIEVN---NNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGF 209
YP ++ + + ++W+++ C P +C N H C QS E+C DL G
Sbjct: 1037 G----NVYPQPLLNSSMCLEDSRYNWSFIHC-PACQC-NGHSKCINQSICEKCEDLTTGK 1090
Query: 210 EC-VCGRG-YNKSEEGGECVP 228
C C G Y GG+C P
Sbjct: 1091 HCETCISGFYGDPTNGGKCQP 1111
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 260 CQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGL 319
CQCNGH+ C +C +C + T G C+ C + GDP + G+C PC CNGH L
Sbjct: 1066 CQCNGHSKCINQS---ICEKCEDLTTGKHCETCISGFYGDPTNGGKCQPCK--CNGHASL 1120
Query: 320 C 320
C
Sbjct: 1121 C 1121
>sp|O75882|ATRN_HUMAN Attractin OS=Homo sapiens GN=ATRN PE=1 SV=2
Length = 1429
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 36 TGSSCPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLG 95
+ C C RT C DC + S EC W S + +C+ + Y A G +
Sbjct: 925 SAKQCRTPCALRTACGDCTSGSS------ECMWCSNMKQCVDSN---AYVASFPFGQCME 975
Query: 96 PHQAPQC-PRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTEGSLNSPSSGPESSTC 154
+ C P +CS Y CS CL CGWC +T G G C EGS P P +
Sbjct: 976 WYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNT--GKGKCIEGSYKGPVKMPSQAPT 1033
Query: 155 DILFYQTYPDQVIEVN---NNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGF 209
YP ++ + + ++W+++ C P +C N H C QS E+C +L G
Sbjct: 1034 G----NFYPQPLLNSSMCLEDSRYNWSFIHC-PACQC-NGHSKCINQSICEKCENLTTGK 1087
Query: 210 EC-VCGRG-YNKSEEGGECVP 228
C C G Y GG+C P
Sbjct: 1088 HCETCISGFYGDPTNGGKCQP 1108
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 260 CQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGL 319
CQCNGH+ C +C +C N T G C+ C + GDP + G+C PC CNGH L
Sbjct: 1063 CQCNGHSKCINQS---ICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCK--CNGHASL 1117
Query: 320 C 320
C
Sbjct: 1118 C 1118
>sp|Q19981|TAG53_CAEEL Putative protein tag-53 OS=Caenorhabditis elegans GN=tag-53 PE=1 SV=3
Length = 1329
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 109/325 (33%), Gaps = 95/325 (29%)
Query: 11 SGQVAYTLEPRTVKTDANRTNIK------LKTGSSCPLRCDQRTDCQDCLTSSGGEGGWH 64
S V Y E ++V D N+ + + CP+ C QR +C DC
Sbjct: 789 SLAVVYEYETKSVLADRNKFLSPSHFPSFFRNATECPMPCAQRNNCSDCT-------DLE 841
Query: 65 ECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQAPQCPRSCSA-------YTQCSTCLR 117
+C W N CI+ L A G C + R C A + C C R
Sbjct: 842 QCMWCPSTNRCINLEAYTLSFAYGQCHSWVTSGSGSVINRVCQAESVVCEEHKTCGECQR 901
Query: 118 HAHCGWCALQRDTTGGMGVCTEGSLNSP-SSGPESSTCDILFYQTYPDQVIEVNNNDSFS 176
CGW L D+ G+G+C G+ P PE+ST
Sbjct: 902 DPGCGW--LADDSKTGLGLCIRGTSTGPLEPKPENST----------------------- 936
Query: 177 WNYVKCPP-----ENECLNDHHTCDPQS----EQCVDLADGFEC-VCGRG-YNKSEEGGE 225
W ++ CP + C + P + + C + G C C G Y + GG
Sbjct: 937 WYFIDCPACQCNGHSTCFTSVGSFPPVTIEKCQSCQNHTTGAHCERCAPGFYGDARNGGV 996
Query: 226 CVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTK 285
C P C C+ AD P V +C TK
Sbjct: 997 CSP-------------------------------CDCHHQADMCDP----VSGQCFCKTK 1021
Query: 286 ---GPQCDKCEPLYVGDPRDNGECV 307
G +CDKCE YVG+PR+ C
Sbjct: 1022 GVTGDRCDKCEAKYVGNPRNGTPCF 1046
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 234 CVRGVCSEPDKCQCDFG-YVGVNCSIQCQCNGHADCAG------PDKLDVCLRCHNHTKG 286
C+RG + P + + + + ++C CQCNGH+ C P ++ C C NHT G
Sbjct: 919 CIRGTSTGPLEPKPENSTWYFIDCP-ACQCNGHSTCFTSVGSFPPVTIEKCQSCQNHTTG 977
Query: 287 PQCDKCEPLYVGDPRDNGECVPC 309
C++C P + GD R+ G C PC
Sbjct: 978 AHCERCAPGFYGDARNGGVCSPC 1000
>sp|Q5VV63|ATRN1_HUMAN Attractin-like protein 1 OS=Homo sapiens GN=ATRNL1 PE=2 SV=2
Length = 1379
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 108/278 (38%), Gaps = 79/278 (28%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TS+G EC W S C+ + + G C L A
Sbjct: 886 CKKPCSLRTSCSNC-TSNG-----MECMWCSSTKRCVDSNAYIISFPYGQC---LEWQTA 936
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTEGSLNSPSSGPESSTCDILFY 159
P++CS C CL CGWC +T G G C EGS S GP L
Sbjct: 937 TCSPQNCSGLRTCGQCLEQPGCGWCNDPSNT--GRGHCIEGS----SRGPMK-----LIG 985
Query: 160 QTYPDQVIEVN---NNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFECVCG 214
+ + V++ N ++ W++++C P +C N H TC + EQC +L G +C
Sbjct: 986 MHHSEMVLDTNLCPKEKNYEWSFIQC-PACQC-NGHSTCINNNVCEQCKNLTTGKQC--- 1040
Query: 215 RGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKL 274
Q C+ G +P G C+ C C+GHA+
Sbjct: 1041 -----------------QDCMPGYYGDPTN--------GGQCT-ACTCSGHANI------ 1068
Query: 275 DVCLRCHNHT----------KGPQCDKC--EPLYVGDP 300
CH HT KG QC C E YVG+P
Sbjct: 1069 -----CHLHTGKCFCTTKGIKGDQCQLCDSENRYVGNP 1101
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 179 YVKCPPENECLN-DHHTCDPQSEQCVDLADGFECV----CGRGYNKSEEG-GECVPVCSQ 232
Y+ P +CL TC PQ+ C L +C+ CG + S G G C+ S+
Sbjct: 921 YIISFPYGQCLEWQTATCSPQN--CSGLRTCGQCLEQPGCGWCNDPSNTGRGHCIEGSSR 978
Query: 233 GCVRGVCSEPDKCQCD---------FGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNH 283
G ++ + + D + + + C CQCNGH+ C + VC +C N
Sbjct: 979 GPMKLIGMHHSEMVLDTNLCPKEKNYEWSFIQCP-ACQCNGHSTCINNN---VCEQCKNL 1034
Query: 284 TKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLC 320
T G QC C P Y GDP + G+C C+ C+GH +C
Sbjct: 1035 TTGKQCQDCMPGYYGDPTNGGQCTACT--CSGHANIC 1069
>sp|Q6A051|ATRN1_MOUSE Attractin-like protein 1 OS=Mus musculus GN=Atrnl1 PE=1 SV=2
Length = 1378
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 104/276 (37%), Gaps = 75/276 (27%)
Query: 40 CPLRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPSYEALYCAGGVCGLVLGPHQA 99
C C RT C +C TSSG EC W S C+ + + G C L A
Sbjct: 885 CKKPCSLRTSCANC-TSSG-----MECMWCSSTKRCVDSNAYIISFPYGQC---LEWQTA 935
Query: 100 PQCPRSCSAYTQCSTCLRHAHCGWCALQRDTTGGMGVCTEGSLNSPSSGPESSTCDILFY 159
P++CS C CL CGWC +T G G C EGS P D++
Sbjct: 936 TCSPQNCSGLRTCGQCLEQPGCGWCNDPSNT--GRGYCIEGSSRGPMKLAGVHNSDVVLD 993
Query: 160 QTY-PDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQS--EQCVDLADGFECVCGRG 216
+ P + ++ W++++C P +C N H TC + EQC +L G +C
Sbjct: 994 TSLCPKE-------KNYEWSFIQC-PACQC-NGHSTCINNNVCEQCKNLTTGRQC----- 1039
Query: 217 YNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDV 276
Q C+ G +P G C+ C C GHA+
Sbjct: 1040 ---------------QECMPGYYGDPTN--------GGQCT-ACTCGGHANV-------- 1067
Query: 277 CLRCHNHT----------KGPQCDKC--EPLYVGDP 300
CH HT KG QC C E YVG+P
Sbjct: 1068 ---CHLHTGKCFCTTKGIKGDQCQLCDSENRYVGNP 1100
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 260 CQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGL 319
CQCNGH+ C + VC +C N T G QC +C P Y GDP + G+C C+ C GH +
Sbjct: 1013 CQCNGHSTCINNN---VCEQCKNLTTGRQCQECMPGYYGDPTNGGQCTACT--CGGHANV 1067
Query: 320 C 320
C
Sbjct: 1068 C 1068
>sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=2
Length = 5193
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 58/127 (45%), Gaps = 29/127 (22%)
Query: 254 VNCSIQCQCNGHADCAGPDKLDVCLRC----HNHTKGPQCDKCEPLYVGDPRDNGE---- 305
+ S +CQC+GHA+ D+ RC H+ T+GPQCD+C PLY P +G+
Sbjct: 509 IIVSGRCQCHGHAETC--DRTRRPYRCLCSPHSFTEGPQCDRCSPLYNDKPFRSGDNVNA 566
Query: 306 --CVPCSEYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTT 362
C PC C+GH C +AS+ P GG C C +HTT
Sbjct: 567 FNCKPCQ--CHGHASSCHYDASVDPFPLEHNRGGG--------------GVCDDCQHHTT 610
Query: 363 GPKCEDC 369
G CE C
Sbjct: 611 GRHCESC 617
>sp|Q9Y6N6|LAMC3_HUMAN Laminin subunit gamma-3 OS=Homo sapiens GN=LAMC3 PE=1 SV=3
Length = 1575
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 238 VCSEPDKCQCDFGYVGVNCSI--QCQCNGHADCAGPDKL-DVCLRCHNHTKGPQCDKCEP 294
+ +P Q + Y + S+ +C+CNGHA GPD + RC ++T G C++C P
Sbjct: 248 IFKDPKVLQ-SYYYAVSDFSVGGRCKCNGHASECGPDVAGQLACRCQHNTTGTDCERCLP 306
Query: 295 LYVGDPRDNG------ECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGP 348
+ P G EC+PC+ C+G + C T + F G
Sbjct: 307 FFQDRPWARGTAEAAHECLPCN--CSGRSEEC----------------TFDRELFRSTG- 347
Query: 349 TTRARCMHCGNHTTGPKCEDCVE 371
RC HC +HT GP CE C E
Sbjct: 348 -HGGRCHHCRDHTAGPHCERCQE 369
Score = 35.0 bits (79), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 247 CDFGYVGVNCSI--------QCQCNGHADCAGPDKLDV----CLRCHNHTKGPQCDKCEP 294
CD G+ G + QCQC+G+ D D CLRC ++T G C+ C+
Sbjct: 789 CDDGFFGDPLGLFGHPQPCHQCQCSGNVDPNAVGNCDPLSGHCLRCLHNTTGDHCEHCQE 848
Query: 295 LYVGD---PRDNGECVPCS 310
+ G PR +C+PCS
Sbjct: 849 GFYGSALAPRPADKCMPCS 867
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 258 IQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPR--DNGECVPC 309
+ C CN H C +C+ C +HT+GP C++C P + G+P +C PC
Sbjct: 705 VPCTCNQHGTCD--PNTGICV-CSHHTEGPSCERCLPGFYGNPFAGQADDCQPC 755
>sp|Q8K3K1|USH2A_RAT Usherin OS=Rattus norvegicus GN=Ush2a PE=1 SV=1
Length = 1512
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 54/122 (44%), Gaps = 29/122 (23%)
Query: 259 QCQCNGHADCAGPDKLDVCLRC----HNHTKGPQCDKCEPLYVGDPRDNG------ECVP 308
+CQC+GHA+ D+ RC H+ T+GPQC +C PLY P +G C P
Sbjct: 513 RCQCHGHAETC--DRTRRPYRCLCSPHSFTEGPQCGRCSPLYNDKPFRSGNKVHAFNCKP 570
Query: 309 CSEYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCE 367
C C+GH C +AS+ P GG C C +HTTG CE
Sbjct: 571 CQ--CHGHASSCHYDASMDPFPLEYNRGGG--------------GVCDDCQHHTTGRNCE 614
Query: 368 DC 369
C
Sbjct: 615 SC 616
>sp|Q8JHV6|LAMB4_DANRE Laminin subunit beta-4 OS=Danio rerio GN=lamb4 PE=2 SV=1
Length = 1827
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 55/128 (42%), Gaps = 22/128 (17%)
Query: 246 QCDFGYVGVNCSIQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGE 305
+C GY G +CQCN AD P D CL C H+ G C++CE YVGDP
Sbjct: 933 RCYPGYYGFPLCRRCQCNRLADICDPITGD-CLDCREHSAGRNCERCEEGYVGDPVSGQP 991
Query: 306 CVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFL-DEGPTTRARCMHCGNHTTGP 364
C PC LC P+ G+ AF ++ P + A C TGP
Sbjct: 992 CEPC---------LC-----------PDLNGSGRFFAFSCNKDPRSGAPYCECLPGHTGP 1031
Query: 365 KCEDCVEG 372
+C+ C G
Sbjct: 1032 QCDSCSPG 1039
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 276 VCLRCHNHTKGPQCDKCEPLYVGDPR----DNGECVPC 309
VC C N+ GPQC+ C P Y DP+ D C+PC
Sbjct: 360 VCDDCRNNRIGPQCELCGPFYYQDPQRSVDDPYACIPC 397
>sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus GN=Lamb3 PE=2 SV=2
Length = 1168
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 85/228 (37%), Gaps = 47/228 (20%)
Query: 161 TYPDQVIEVNNNDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKS 220
T+P +V+ +W V+C P ++ N H T +DLA + K
Sbjct: 156 TFP----QVHQGQPKNWQDVRCRPLSQRPNGHLTGGKVQLNLMDLASA---IPASQSKKI 208
Query: 221 EEGGEC----VPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDK--- 273
+E G+ V V S P F + C C+GHAD P+
Sbjct: 209 QELGDITNLRVNFTKLAPVPQRGSYPPSAY--FAVSQLRLQGSCFCHGHADRCAPNPGGS 266
Query: 274 ------LDVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSEYCNGHTGLCI 321
+VC+ C ++T GP CD+C P Y P +D EC C CNGH+ C
Sbjct: 267 TTAVQVNNVCV-CQHNTAGPNCDRCAPFYNNRPWRPAEGQDTHECQRCD--CNGHSETC- 322
Query: 322 NASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
F P A F T C +C +HT G CE C
Sbjct: 323 -------HFDP--------AVFAASQGTNGGVCDNCRDHTEGKNCERC 355
>sp|Q2HXW4|NET1_PIG Netrin-1 OS=Sus scrofa GN=NTN1 PE=2 SV=1
Length = 600
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 259 QCQCNGHADCAGPDKLDVCL-RCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA D+ D + C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 284 RCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN- 342
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N L L +SGG C++C ++T G C C
Sbjct: 343 -CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYCK 384
Query: 371 EG 372
EG
Sbjct: 385 EG 386
>sp|Q924Z9|NET1_RAT Netrin-1 OS=Rattus norvegicus GN=Ntn1 PE=1 SV=1
Length = 604
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 259 QCQCNGHADCAGPDKLDVCL-RCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA D+ D + C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 284 RCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN- 342
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N L L +SGG C++C ++T G C C
Sbjct: 343 -CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYCK 384
Query: 371 EG 372
EG
Sbjct: 385 EG 386
>sp|O09118|NET1_MOUSE Netrin-1 OS=Mus musculus GN=Ntn1 PE=1 SV=3
Length = 604
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 259 QCQCNGHADCAGPDKLDVCL-RCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA D+ D + C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 284 RCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN- 342
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N L L +SGG C++C ++T G C C
Sbjct: 343 -CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYCK 384
Query: 371 EG 372
EG
Sbjct: 385 EG 386
>sp|O95631|NET1_HUMAN Netrin-1 OS=Homo sapiens GN=NTN1 PE=1 SV=2
Length = 604
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 259 QCQCNGHADCAGPDKLDVCL-RCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA D+ D + C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 284 RCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN- 342
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N L L +SGG C++C ++T G C C
Sbjct: 343 -CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYCK 384
Query: 371 EG 372
EG
Sbjct: 385 EG 386
>sp|Q90923|NET3_CHICK Netrin-3 (Fragment) OS=Gallus gallus GN=NTN3 PE=2 SV=1
Length = 581
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA C + + C ++T+GP+CD+C+P + P R+ EC+ C+
Sbjct: 261 RCKCNGHASRCVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLACN- 319
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N L L +SGG C++C ++T G C C
Sbjct: 320 -CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYCK 361
Query: 371 EG 372
EG
Sbjct: 362 EG 363
>sp|Q90922|NET1_CHICK Netrin-1 OS=Gallus gallus GN=NTN1 PE=1 SV=1
Length = 606
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 259 QCQCNGHADCAGPDKLDVCL-RCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA D+ D + C ++T GP+CD+C+P + P R+ ECV C+
Sbjct: 286 RCKCNGHASRCVRDRDDNLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACN- 344
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CN H C N L L +SGG C++C ++T G C C
Sbjct: 345 -CNLHARRCRFNMELYKLS-GRKSGGV----------------CLNCRHNTAGRHCHYCK 386
Query: 371 EG 372
EG
Sbjct: 387 EG 388
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus GN=Lama2 PE=1 SV=1
Length = 3106
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 62/157 (39%), Gaps = 41/157 (26%)
Query: 236 RGVCSEPDKCQCDFGYVGVNCSI------------------QCQCNGHADCAGPDKLDVC 277
R + ++ + CQC GY G +C CQC HA+ A D C
Sbjct: 711 RRIATDVEVCQCPPGYSGSSCETCWPRHRRVNGTIFGGICEPCQCFAHAE-ACDDITGEC 769
Query: 278 LRCHNHTKGPQCDKCEPLYVGDPRDNG--ECVPCSEYCNGHTGLCINASLASLPFSPESG 335
L C +HT GP C++C P + GDP +C PC+ N + S FSP
Sbjct: 770 LNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPCACPLN----------IPSNNFSPTCH 819
Query: 336 GTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
L DE P TGP+CE C EG
Sbjct: 820 LDRSLGLICDECPIG----------YTGPRCERCAEG 846
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 258 IQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRD-NGECVPCS 310
+ CQCNGH+ P+ VC C +HT G C++C Y G R +C PC+
Sbjct: 1414 VPCQCNGHSSQCDPET-SVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCA 1466
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 260 CQCNGHADCAGPDKLDV----CLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC------ 309
CQCN + D + P D CL C T G C+ C Y GD + C PC
Sbjct: 861 CQCNDNLDYSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFGDAVNTKNCQPCRCDING 920
Query: 310 --SEYCNGHTGLC 320
SE C+ TG C
Sbjct: 921 SFSEDCHTRTGQC 933
>sp|Q1LVF0|LAMC1_DANRE Laminin subunit gamma-1 OS=Danio rerio GN=lamc1 PE=2 SV=2
Length = 1593
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 259 QCQCNGHA-DCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA +C + + C ++T+G C+ C+P Y P + EC+PC+
Sbjct: 269 RCKCNGHASECVKNEYSKLVCNCKHNTEGADCNVCKPFYNDRPWRRATAENPNECLPCN- 327
Query: 312 YCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CNG + C F PE L C +C ++T GPKCE C+
Sbjct: 328 -CNGKSAECY--------FDPE----------LYRATGHGGHCRNCADNTDGPKCERCL 367
>sp|Q9R0B6|LAMC3_MOUSE Laminin subunit gamma-3 OS=Mus musculus GN=Lamc3 PE=2 SV=2
Length = 1581
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 259 QCQCNGHADCAGPDKL-DVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA P+ + RC ++T G C++C P + P D EC+PC+
Sbjct: 279 RCKCNGHASECEPNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCN- 337
Query: 312 YCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
C+GH+ C L S GG C C +HTTGP CE C
Sbjct: 338 -CSGHSEECTFDR--ELYRSTGHGG----------------HCQRCRDHTTGPHCERC 376
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 63/164 (38%), Gaps = 46/164 (28%)
Query: 211 CVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCAG 270
C+C +GY G+ C+ G R + G NC I C CN H C
Sbjct: 685 CLCPQGYT-----GQFCEFCALGYKREI---------PHGGPYANC-IPCTCNQHGTC-D 728
Query: 271 PDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDN--GECVPCSEYCNGHTGLCINASLASL 328
P+ +CL C +HT+GP C++C P + G+ +C PC C G +
Sbjct: 729 PNT-GICL-CGHHTEGPSCERCMPGFYGNAFSGRADDCQPCP--CPGQSACAT------- 777
Query: 329 PFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
PESG C HC G +CE C +G
Sbjct: 778 --IPESGDVV---------------CTHCPPGQRGRRCESCEDG 804
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core
protein OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 19/83 (22%)
Query: 235 VRGVCSEPDKCQCDFGYVGVNCSI------------------QCQCNGHADCAGPDKLDV 276
+ G ++C+C GY G++C C CNGHA P
Sbjct: 721 IHGRAHSVEECRCPIGYSGLSCESCDAHFTRVPGGPYLGTCSGCNCNGHASSCDP-VYGH 779
Query: 277 CLRCHNHTKGPQCDKCEPLYVGD 299
CL C ++T+GPQCDKC+P + GD
Sbjct: 780 CLNCQHNTEGPQCDKCKPGFFGD 802
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 247 CDFGYVGVNCSI------QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP 300
CD GY V + +C C+GH++ P+ C C +HT+G C++C+P Y GD
Sbjct: 1140 CDTGYTRVPSGLYLGTCERCNCHGHSETCEPET-GACQSCQHHTEGASCEQCQPGYYGDA 1198
Query: 301 RDNG--ECVPC 309
+ +C PC
Sbjct: 1199 QRGTPQDCQPC 1209
Score = 35.8 bits (81), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 70/200 (35%), Gaps = 52/200 (26%)
Query: 203 VDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEP-----DKCQCDFGYVGVNCS 257
+ LAD E + ++ V +G G S P ++C+C GYVG++C
Sbjct: 1483 MALADLDELLVRATFSSVPRAASISAVSLEGAQPGPSSGPRALEVEECRCPPGYVGLSCQ 1542
Query: 258 ------------------IQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD 299
C+CNGH+D P+ C RC ++T G C+ C Y GD
Sbjct: 1543 DCAPGYTRTGSGLYLGQCELCECNGHSDLCHPET-GACSRCQHNTAGEFCELCATGYYGD 1601
Query: 300 -----PRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARC 354
P D C PC+ P + S L G RC
Sbjct: 1602 ATAGTPED---CQPCA-----------------CPLTNPENMFSRTCESLGAG---GYRC 1638
Query: 355 MHCGNHTTGPKCEDCVEGKE 374
C TG CE C G E
Sbjct: 1639 TACEPGYTGQYCEQCAPGYE 1658
>sp|Q8VIK5|PEAR1_MOUSE Platelet endothelial aggregation receptor 1 OS=Mus musculus
GN=Pear1 PE=1 SV=1
Length = 1034
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 200 EQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQ 259
Q V + C RGY +S G CVP+C+Q CV G C P++CQC G+ G +CS +
Sbjct: 75 RQVVKMDSRPRLQCCRGYYESR--GACVPLCAQECVHGRCVAPNQCQCAPGWRGGDCSSE 132
Query: 260 C 260
C
Sbjct: 133 C 133
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 62/155 (40%), Gaps = 41/155 (26%)
Query: 238 VCSEPDKCQCDFGYVG------------VNCSI------QCQCNGHADCAGPDKLDVCLR 279
+ + + CQC GY G VN +I CQC GHA+ D CL
Sbjct: 717 IAAAVEVCQCPPGYTGSSCESCWPRHRRVNGTIFGGICEPCQCFGHAESCD-DVTGECLN 775
Query: 280 CHNHTKGPQCDKCEPLYVGDPRD--NGECVPCSEYCNGHTGLCINASLASLPFSPESGGT 337
C +HT GP CDKC P + G+P + +C PC+ N + S FSP
Sbjct: 776 CKDHTGGPYCDKCLPGFYGEPTKGTSEDCQPCACPLN----------IPSNNFSPTCHLD 825
Query: 338 SELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
L C C TGP+CE C EG
Sbjct: 826 RSLGLI----------CDGCPVGYTGPRCERCAEG 850
Score = 36.2 bits (82), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 33/102 (32%)
Query: 227 VPVCSQGCVRGVCSEP-----DKCQCDFGYVGVNCS------------------------ 257
+ V QG RG P +KC C GY G++C
Sbjct: 1359 MEVAEQG--RGTTMTPPADLIEKCDCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGT 1416
Query: 258 -IQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVG 298
+ CQCNGH+ P+ +C C +HT G C++C Y G
Sbjct: 1417 CVPCQCNGHSSLCDPET-SICQNCQHHTAGDFCERCALGYYG 1457
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 260 CQCNGHADCAGPDKLDV----CLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC------ 309
CQCN + D + P D CL C T G C+ C Y GD D C PC
Sbjct: 865 CQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFGDAVDAKNCQPCRCNAGG 924
Query: 310 --SEYCNGHTGLC 320
SE C+ TG C
Sbjct: 925 SFSEVCHSQTGQC 937
>sp|O75445|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3
Length = 5202
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 254 VNCSIQCQCNGHAD-CAGPDKLDVCL-RCHNHTKGPQCDKCEPLYVGDPRDNGE------ 305
+ S +CQC+GHAD C + CL + T+G CD+C PLY P G+
Sbjct: 512 ITISGRCQCHGHADNCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNDKPFRQGDQVYAFN 571
Query: 306 CVPCSEYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGP 364
C PC CN H+ C N S+ PF GG C C ++TTG
Sbjct: 572 CKPCQ--CNSHSKSCHYNISVDPFPFEHFRGGG--------------GVCDDCEHNTTGR 615
Query: 365 KCEDC 369
CE C
Sbjct: 616 NCELC 620
>sp|Q13751|LAMB3_HUMAN Laminin subunit beta-3 OS=Homo sapiens GN=LAMB3 PE=1 SV=1
Length = 1172
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 52/128 (40%), Gaps = 37/128 (28%)
Query: 260 CQCNGHAD--------CAGPDKL----DVCLRCHNHTKGPQCDKCEPLYVGDP------R 301
C C+GHAD AGP DVC+ C ++T GP C++C P Y P +
Sbjct: 250 CFCHGHADRCAPKPGASAGPSTAVQVHDVCV-CQHNTAGPNCERCAPFYNNRPWRPAEGQ 308
Query: 302 DNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHT 361
D EC C CNGH+ C F P A F C +C +HT
Sbjct: 309 DAHECQRCD--CNGHSETC--------HFDP--------AVFAASQGAYGGVCDNCRDHT 350
Query: 362 TGPKCEDC 369
G CE C
Sbjct: 351 EGKNCERC 358
>sp|A0JP86|LAMC1_XENTR Laminin subunit gamma-1 OS=Xenopus tropicalis GN=lamc1 PE=2 SV=1
Length = 1592
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 27/120 (22%)
Query: 259 QCQCNGHA-DCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDN------GECVPCSE 311
+C+CNGHA +C + + C ++T G C+KC P Y P EC+PC+
Sbjct: 268 RCKCNGHASECVRNEFEKIVCNCKHNTFGSDCEKCLPFYNDRPWRRSTADSPNECLPCN- 326
Query: 312 YCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVE 371
CNG + C F PE L C C ++T GP CE C E
Sbjct: 327 -CNGRSQECY--------FDPE----------LYRSTGHGGHCTGCADNTDGPNCERCRE 367
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 23/86 (26%)
Query: 245 CQCDFGYVGVNCS-------------------IQCQCNGHADCAGPDKLDVCLRCHNHTK 285
C C GY+G C + C CNGH+D P+ VC C ++T
Sbjct: 673 CSCPTGYIGQFCERCAPGYRRENPSQGPYSPCVLCTCNGHSDTCDPES-GVC-DCQHNTA 730
Query: 286 GPQCDKCEPLYVGDPR--DNGECVPC 309
GP C++C Y GD +C PC
Sbjct: 731 GPHCERCSEGYYGDSTTGSASDCQPC 756
>sp|Q7ZXL5|NELL2_XENLA Protein kinase C-binding protein NELL2 OS=Xenopus laevis GN=nell2
PE=2 SV=1
Length = 814
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG-VCS 240
C NEC + H+CD ++ C + G CVC GY + G +C C GC G C
Sbjct: 478 CTEHNECATNQHSCD-ENAMCFNTVGGHNCVCQPGYTGN--GTDCRAFCKDGCRNGGTCI 534
Query: 241 EPDKCQCDFGYVGVNC 256
P+ C C G+ G +C
Sbjct: 535 APNICACPQGFTGPSC 550
>sp|O00634|NET3_HUMAN Netrin-3 OS=Homo sapiens GN=NTN3 PE=2 SV=1
Length = 580
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 29/134 (21%)
Query: 249 FGYVGVNCSI--QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP----- 300
+ Y + + +C+CNGHA C + + C + T+GP C +C+P Y P
Sbjct: 242 YSYAATDLQVGGRCKCNGHASRCLLDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRAT 301
Query: 301 -RDNGECVPCSEYCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCG 358
R++ C+ CS CNGH C N L L SGG C++C
Sbjct: 302 ARESHACLACS--CNGHARRCRFNMELYRLSGR-RSGGV----------------CLNCR 342
Query: 359 NHTTGPKCEDCVEG 372
++T G C C EG
Sbjct: 343 HNTAGRHCHYCREG 356
>sp|Q06561|UNC52_CAEEL Basement membrane proteoglycan OS=Caenorhabditis elegans GN=unc-52
PE=1 SV=2
Length = 3375
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 52/158 (32%)
Query: 239 CSEPDKCQCDFGYVGVNCSI------------------QCQCNGHADCAGPDKLDVCLRC 280
+E ++C C GYVG +C +C+CNGHA + CL C
Sbjct: 916 AAEVEQCICPPGYVGTSCEDCAPGYSRTGGGLYLGLCEKCECNGHASQCD-KEYGYCLDC 974
Query: 281 HNHTKGPQCDKCEPLYVGDPRDN--GECVPCSE----YCNGHTGLCINASLASLPFSPES 334
++T+G QC++C+P +VGD R +C P + +CN H SP
Sbjct: 975 QHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNH--------------SPR- 1019
Query: 335 GGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
G + RC+ C ++T G CE C +G
Sbjct: 1020 ------------GCDSFGRCLLCEHNTEGTHCERCKKG 1045
Score = 31.6 bits (70), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 44/116 (37%), Gaps = 33/116 (28%)
Query: 213 CGRGYNKSEEG---GECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHADCA 269
C GY +S G G CVP+ +P QC G V Q QC
Sbjct: 648 CAPGYERSGYGPYLGTCVPI-----------QPRHQQCGPGAVAPTAPAQGQC------- 689
Query: 270 GPDKLDVCLRCHNHTKGPQCDKCEPLYVG-DPRDNGECVPCSEYCNGHTGLCINAS 324
+C GP CD+C P G P + C+PC +C+G T C +S
Sbjct: 690 ---------QCKASVIGPNCDRCAPNSFGLAPTNPQGCIPC--FCSGVTQQCSASS 734
>sp|Q5VY43|PEAR1_HUMAN Platelet endothelial aggregation receptor 1 OS=Homo sapiens
GN=PEAR1 PE=1 SV=1
Length = 1037
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 221 EEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQC 260
E G CVP+C+Q CV G C P++CQC G+ G +CS +C
Sbjct: 96 ESRGFCVPLCAQECVHGRCVAPNQCQCVPGWRGDDCSSEC 135
>sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2
Length = 1786
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 61/153 (39%), Gaps = 30/153 (19%)
Query: 226 CVPVCSQ-GCVRGVCSEPDKCQCDF---GYVGVNCSIQCQCNGHADCAGPDKLDVCLRCH 281
C PV Q C +GV + QCD G+ G CQCNGHAD P + CL C
Sbjct: 833 CNPVTGQCHCFQGVYAR----QCDRCLPGHWGFPSCQPCQCNGHADDCDPVTGE-CLNCQ 887
Query: 282 NHTKGPQCDKCEPLYVGDPR--DNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSE 339
++T G C++C Y GDP C PC P P+SG
Sbjct: 888 DYTMGHNCERCLAGYYGDPIIGSGDHCRPC-----------------PCPDGPDSGRQFA 930
Query: 340 LAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
+ + D P T C G +C+DC G
Sbjct: 931 RSCYQD--PVTLQLACVCDPGYIGSRCDDCASG 961
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 28/108 (25%)
Query: 245 CQCDFGYVGVNCS-----------------IQCQCNGHADCAGPDKLDV----CLRCHNH 283
C CD GY+G C CQC+ + D P+ D CL+C H
Sbjct: 944 CVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYH 1003
Query: 284 TKGPQCDKCEPLYVGDP--RDNGECV-----PCSEYCNGHTGLCINAS 324
T+G C C Y GD +D +CV E+CNG C A+
Sbjct: 1004 TEGEHCQFCRFGYYGDALQQDCRKCVCNYLGTVQEHCNGSDCQCDKAT 1051
>sp|A2VCU8|NELL2_XENTR Protein kinase C-binding protein NELL2 OS=Xenopus tropicalis
GN=nell2 PE=2 SV=1
Length = 814
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG-VCS 240
C NEC + H+CD ++ C + G CVC GY + G C C+ GC G C
Sbjct: 478 CTEHNECATNQHSCD-ENAVCYNTVGGHNCVCQPGYTGN--GTVCKAFCTDGCRNGGTCI 534
Query: 241 EPDKCQCDFGYVGVNCSIQ--------CQCNGHADC 268
P+ C C G+ G +C QC+ A+C
Sbjct: 535 APNICACPQGFTGPSCEADIDECTEGFVQCDSRANC 570
>sp|Q8WTR8|NET5_HUMAN Netrin-5 OS=Homo sapiens GN=NTN5 PE=2 SV=2
Length = 489
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 47/121 (38%), Gaps = 26/121 (21%)
Query: 259 QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYV------GDPRDNGECVPCSEY 312
+CQC+GHA C +HT GP C+ C P + PR C+PCS
Sbjct: 156 RCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCS-- 213
Query: 313 CNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVE 371
CN H C N+ L L SGG S C C +HT G C C
Sbjct: 214 CNQHARRCRFNSELFRL-----SGGRSG------------GVCERCRHHTAGRHCHYCQP 256
Query: 372 G 372
G
Sbjct: 257 G 257
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 247 CDFGYVGVNCSI------QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGD 299
CD GY + +C C+GH++ P+ C C +HT+GP+C++C+P Y GD
Sbjct: 1140 CDTGYTRTPSGLYLGTCERCSCHGHSEACEPET-GACQGCQHHTEGPRCEQCQPGYYGD 1197
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 19/75 (25%)
Query: 243 DKCQCDFGYVGVNCSI------------------QCQCNGHADCAGPDKLDVCLRCHNHT 284
++C+C GY G++C C CNGHA P CL C ++T
Sbjct: 729 EECRCPIGYSGLSCESCDAHFTRVPGGPYLGTCSGCNCNGHASSCDP-VYGHCLNCQHNT 787
Query: 285 KGPQCDKCEPLYVGD 299
+GPQC+KC+ + GD
Sbjct: 788 EGPQCNKCKAGFFGD 802
>sp|Q96KG7|MEG10_HUMAN Multiple epidermal growth factor-like domains protein 10 OS=Homo
sapiens GN=MEGF10 PE=1 SV=1
Length = 1140
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 221 EEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQC 260
E G CVP C+ CV G C P+ CQC+ G+ G NCS C
Sbjct: 100 ESGEMCVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSAC 139
>sp|Q9R1A3|NET3_MOUSE Netrin-3 OS=Mus musculus GN=Ntn3 PE=2 SV=1
Length = 580
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 53/122 (43%), Gaps = 27/122 (22%)
Query: 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDP--RDNGE----CVPCSE 311
+C+CNGHA C + C + T+GP C +C+P Y P R G+ C+ CS
Sbjct: 254 RCKCNGHASRCLLDTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLACS- 312
Query: 312 YCNGHTGLC-INASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370
CNGH C N L L SGG C++C ++T G C C
Sbjct: 313 -CNGHARRCRFNMELYRLS-GRRSGGV----------------CLNCRHNTAGRHCHYCR 354
Query: 371 EG 372
EG
Sbjct: 355 EG 356
>sp|Q24568|NETB_DROME Netrin-B OS=Drosophila melanogaster GN=NetB PE=1 SV=1
Length = 793
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 43/107 (40%), Gaps = 26/107 (24%)
Query: 273 KLDVCLRCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSEYCNGHTGLC-INASL 325
KL + C ++T GP+C++C+P Y P D EC C CNGH C N L
Sbjct: 456 KLTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQ--CNGHARRCRFNLEL 513
Query: 326 ASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
L G + C +C + TTG C C EG
Sbjct: 514 YKL-----------------SGRVSGGVCYNCQHDTTGRYCHYCREG 543
>sp|Q9H1U4|MEGF9_HUMAN Multiple epidermal growth factor-like domains protein 9 OS=Homo
sapiens GN=MEGF9 PE=2 SV=3
Length = 602
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 68/189 (35%), Gaps = 43/189 (22%)
Query: 208 GFEC-VCGRGYNKSEEGGECVPV-CS-QGCVRGVCSEPDKCQCDFGYVGVNCS------- 257
G C C G+ + G C P CS G + C+ KCQC G +G C
Sbjct: 232 GLHCETCKEGFYLNYTSGLCQPCDCSPHGALSIPCNSSGKCQCKVGVIGSICDRCQDGYY 291
Query: 258 -------IQCQCNGHADCAGPDKLD-VCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPC 309
+ CQCN + A D L CL C ++KG C++C+ + P EC+ C
Sbjct: 292 GFSKNGCLPCQCNNRS--ASCDALTGACLNCQENSKGNHCEECKEGFYQSPDATKECLRC 349
Query: 310 SEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369
TG C S+ S PE C C + GP C C
Sbjct: 350 PCSAVTSTGSC---SIKSSELEPE--------------------CDQCKDGYIGPNCNKC 386
Query: 370 VEGKENRQS 378
G N S
Sbjct: 387 ENGYYNFDS 395
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 74/175 (42%), Gaps = 37/175 (21%)
Query: 187 ECLNDHHTCDPQSEQCV---DLADGFECV-CGRGYNKSEEG-GECVP-VCSQGCVRGVCS 240
+C N +CD + C+ + + G C C G+ +S + EC+ CS G CS
Sbjct: 302 QCNNRSASCDALTGACLNCQENSKGNHCEECKEGFYQSPDATKECLRCPCSAVTSTGSCS 361
Query: 241 ------EPDKCQCDFGYVGVNCSI-------------QCQCNGHADCAGPDKL-----DV 276
EP+ QC GY+G NC+ +CQC+GH D K+
Sbjct: 362 IKSSELEPECDQCKDGYIGPNCNKCENGYYNFDSICRKCQCHGHVDPVKTPKICKPESGE 421
Query: 277 CLRCHNHTKGPQCDKCEPLYVGDPRDN----GECVPCSEYCNGHTGLCINASLAS 327
C+ C ++T G C+ C YV D N +P E G T L NASL +
Sbjct: 422 CINCLHNTTGFWCENCLEGYVHDLEGNCIKKEVILPTPE---GSTILVSNASLTT 473
>sp|Q62918|NELL2_RAT Protein kinase C-binding protein NELL2 OS=Rattus norvegicus
GN=Nell2 PE=2 SV=1
Length = 816
Score = 39.3 bits (90), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 182 CPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVR-GVCS 240
C +ECL + H CD ++ C + G CVC GY + G C C GC G C
Sbjct: 480 CTEHDECLTNQHNCD-ENALCFNTVGGHNCVCKPGYTGN--GTTCKAFCKDGCKNGGACI 536
Query: 241 EPDKCQCDFGYVGVNCSIQ--------CQCNGHADC 268
+ C C G+ G +C QC+ A+C
Sbjct: 537 AANVCACPQGFTGPSCETDIDECSEGFVQCDSRANC 572
>sp|A6BM72|MEG11_HUMAN Multiple epidermal growth factor-like domains protein 11 OS=Homo
sapiens GN=MEGF11 PE=2 SV=3
Length = 1044
Score = 39.3 bits (90), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 221 EEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQC 260
E G C+P+C++ CV G C PD C C+ G+ G +CS C
Sbjct: 94 ESGDFCIPLCTEECVHGRCVSPDTCHCEPGWGGPDCSSGC 133
>sp|Q9Y2I2|NTNG1_HUMAN Netrin-G1 OS=Homo sapiens GN=NTNG1 PE=1 SV=3
Length = 539
Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 259 QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTG 318
+C+CN HA D + C ++T GP C KC+ Y G P G +P + G
Sbjct: 296 RCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPK---GTAN 352
Query: 319 LCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
CI S++S+ + E G S +++D T C+ C ++T G CE C G
Sbjct: 353 TCI-PSISSIG-NCECFGHSNRCSYIDLLNT--VICVSCKHNTRGQHCELCRLG 402
>sp|P55268|LAMB2_HUMAN Laminin subunit beta-2 OS=Homo sapiens GN=LAMB2 PE=1 SV=2
Length = 1798
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 21/75 (28%)
Query: 245 CQCDFGYVGVNCSI-----------------QCQCNGHADCAGPDKLD----VCLRCHNH 283
C C GY G+ C C+C+G+ D PD D CLRC +H
Sbjct: 954 CHCRAGYTGLRCEACAPGHFGDPSRPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHH 1013
Query: 284 TKGPQCDKCEPLYVG 298
T+GP C C+P + G
Sbjct: 1014 TEGPHCAHCKPGFHG 1028
>sp|Q92832|NELL1_HUMAN Protein kinase C-binding protein NELL1 OS=Homo sapiens GN=NELL1
PE=1 SV=4
Length = 810
Score = 38.5 bits (88), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPVCSQGCVRG-V 238
C +EC + H CD ++ C + G C C GY + G C C +GC G
Sbjct: 472 FSCTEHDECGSGQHNCD-ENAICTNTVQGHSCTCKPGYVGN--GTICRAFCEEGCRYGGT 528
Query: 239 CSEPDKCQCDFGYVGVNCSIQCQCNGHADCAGPDKLDVC----LRCHNHTK 285
C P+KC C G+ G +C +D C + CHNH++
Sbjct: 529 CVAPNKCVCPSGFTGSHCE--------------KDIDECSEGIIECHNHSR 565
>sp|Q8AVH7|EGFL6_XENLA Epidermal growth factor-like protein 6 OS=Xenopus laevis GN=egfl6
PE=2 SV=1
Length = 544
Score = 38.5 bits (88), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 208 GFECVCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCS 257
G + C G+ ++ +G +C VC QGC G C P+KC+C G+ G NC+
Sbjct: 50 GIKAECCYGWKRNRKG-QCEAVCEQGCKHGECVGPNKCKCFPGFTGKNCN 98
>sp|Q8R4G0|NTNG1_MOUSE Netrin-G1 OS=Mus musculus GN=Ntng1 PE=1 SV=2
Length = 539
Score = 38.5 bits (88), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 259 QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEYCNGHTG 318
+C+CN HA D + C ++T GP C KC+ Y G P G +P + G
Sbjct: 296 RCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPK---GTAN 352
Query: 319 LCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
CI S++S+ + E G S +++D T C+ C ++T G CE C G
Sbjct: 353 TCI-PSISSIG-NCECFGHSNRCSYIDLLNT--VICVSCKHNTRGQHCELCRLG 402
>sp|P11047|LAMC1_HUMAN Laminin subunit gamma-1 OS=Homo sapiens GN=LAMC1 PE=1 SV=3
Length = 1609
Score = 38.5 bits (88), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 27/120 (22%)
Query: 259 QCQCNGHADCAGPDKLDVCL-RCHNHTKGPQCDKCEPLYVGDP------RDNGECVPCSE 311
+C+CNGHA ++ D + C ++T G C+KC P + P EC+PC
Sbjct: 285 RCKCNGHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCD- 343
Query: 312 YCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVE 371
CNG + C F PE L C +C ++T G CE C E
Sbjct: 344 -CNGRSQECY--------FDPE----------LYRSTGHGGHCTNCQDNTDGAHCERCRE 384
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 30/117 (25%)
Query: 258 IQCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPR--DNGECVPCSEYCNG 315
+ C CNGH++ P+ VC C ++T GP C+KC Y GD + +C PC C G
Sbjct: 722 VLCACNGHSETCDPET-GVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCP--CPG 777
Query: 316 HTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEG 372
+S A +P T C +C TTG +CE C +G
Sbjct: 778 ------GSSCAVVP------------------KTKEVVCTNCPTGTTGKRCELCDDG 810
>sp|A8XMW6|CED1_CAEBR Cell death abnormality protein 1 OS=Caenorhabditis briggsae
GN=ced-1 PE=3 SV=2
Length = 1134
Score = 38.5 bits (88), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 24/92 (26%)
Query: 192 HHTCDPQSEQCVDLADGFECV-----------------------CGRGYNKSEEGGECVP 228
H +EQC++ GF+CV C GY ++++ +C P
Sbjct: 61 HQVVYNDTEQCLNPLTGFQCVVEKRGQKASYQRQLVQKEKYIKQCCEGYYQTKDN-QCQP 119
Query: 229 VCSQGCVRGVCSEPDKCQCDFGYVGVNCSIQC 260
C+ C +G C EP KC+CD G+ G CS C
Sbjct: 120 DCNPPCKKGKCVEPGKCECDPGFGGKICSSSC 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.471
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,878,769
Number of Sequences: 539616
Number of extensions: 7452813
Number of successful extensions: 18223
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 526
Number of HSP's that attempted gapping in prelim test: 13912
Number of HSP's gapped (non-prelim): 2999
length of query: 380
length of database: 191,569,459
effective HSP length: 119
effective length of query: 261
effective length of database: 127,355,155
effective search space: 33239695455
effective search space used: 33239695455
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)