Query psy9822
Match_columns 380
No_of_seqs 312 out of 1858
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 20:35:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9822.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9822hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1klo_A Laminin; glycoprotein; 99.7 8.8E-17 3E-21 142.0 6.4 128 198-379 5-157 (162)
2 2y38_A Laminin subunit alpha-5 99.4 1.8E-13 6E-18 136.5 5.4 109 259-379 265-384 (403)
3 1klo_A Laminin; glycoprotein; 99.3 3.4E-13 1.2E-17 118.9 2.9 90 260-378 1-101 (162)
4 2vj3_A Neurogenic locus notch 99.3 1.3E-12 4.4E-17 111.4 6.3 105 181-291 1-119 (135)
5 2ygq_A WIF-1, WNT inhibitory f 99.3 2.1E-12 7.1E-17 126.0 7.8 86 193-290 153-243 (324)
6 2gy5_A Angiopoietin-1 receptor 99.3 3.2E-12 1.1E-16 128.9 6.2 120 208-369 184-321 (423)
7 4aqt_A Laminin subunit gamma-1 99.2 6.9E-12 2.4E-16 124.3 3.0 99 259-378 254-360 (375)
8 2vj2_A Jagged-1; signalling, p 99.1 5.8E-11 2E-15 105.0 3.7 142 173-368 21-169 (169)
9 2ygq_A WIF-1, WNT inhibitory f 99.0 4.4E-10 1.5E-14 109.5 6.6 104 174-293 202-310 (324)
10 4aqs_A Laminin subunit beta-1; 98.9 2.8E-09 9.5E-14 110.1 10.5 79 274-378 406-485 (525)
11 3fcs_B Integrin beta-3; beta p 98.9 1.7E-09 5.9E-14 114.9 9.1 103 175-292 464-601 (690)
12 1z1y_A Ookinete surface protei 98.9 1.4E-10 4.8E-15 103.8 -0.7 136 193-370 11-177 (186)
13 2vj2_A Jagged-1; signalling, p 98.9 1.9E-09 6.4E-14 95.3 5.9 105 174-290 55-168 (169)
14 1z1y_A Ookinete surface protei 98.8 1.6E-10 5.5E-15 103.4 -2.7 113 175-291 31-175 (186)
15 4d90_A EGF-like repeat and dis 98.8 2.8E-09 9.6E-14 90.9 4.8 97 193-291 6-133 (143)
16 2gy5_A Angiopoietin-1 receptor 98.7 5.9E-09 2E-13 105.1 5.1 98 244-377 186-288 (423)
17 3fcs_B Integrin beta-3; beta p 98.7 6.4E-09 2.2E-13 110.5 5.0 91 193-290 440-559 (690)
18 4aqs_A Laminin subunit beta-1; 98.7 1.3E-08 4.4E-13 105.1 5.8 98 243-368 418-525 (525)
19 3k6s_B Integrin beta-2; cell r 98.7 3.4E-08 1.2E-12 104.7 8.7 104 175-293 452-594 (687)
20 1emn_A Fibrillin; extracellula 98.6 2.2E-08 7.7E-13 77.8 4.6 68 181-253 1-75 (82)
21 3k6s_B Integrin beta-2; cell r 98.6 4.1E-08 1.4E-12 104.1 7.7 87 193-290 435-552 (687)
22 1dx5_I Thrombomodulin; serine 98.6 1E-08 3.5E-13 85.2 1.3 96 183-287 2-111 (118)
23 2vj3_A Neurogenic locus notch 98.5 4.6E-08 1.6E-12 83.0 4.5 95 233-367 14-118 (135)
24 3zyj_B Netrin-G1; cell adhesio 98.5 2.3E-08 8E-13 100.1 2.3 92 259-369 296-399 (426)
25 1yo8_A Thrombospondin-2; EGF, 98.4 1.2E-07 4.2E-12 99.6 3.8 101 184-290 2-145 (634)
26 4d90_A EGF-like repeat and dis 98.4 2.9E-07 1E-11 78.2 5.1 70 182-258 49-133 (143)
27 2bou_A EGF-like module contain 98.3 1.9E-07 6.5E-12 79.7 3.1 42 179-221 38-80 (143)
28 2w86_A Fibrillin-1, fibrillin1 98.3 1.3E-07 4.4E-12 81.2 1.6 99 183-287 2-140 (147)
29 2bou_A EGF-like module contain 98.3 3.3E-07 1.1E-11 78.2 3.7 91 194-289 8-132 (143)
30 1uzk_A Fibrillin-1; glycoprote 98.3 1.2E-07 4.2E-12 82.7 0.8 72 183-257 1-90 (162)
31 1lmj_A Fibrillin 1; EGF, calci 98.2 5.2E-07 1.8E-11 70.5 2.5 68 184-253 2-78 (86)
32 4fbr_A Lectin, myxobacterial h 98.2 4.3E-09 1.5E-13 99.3 -11.3 104 178-290 23-134 (267)
33 1x7a_L Coagulation factor IX, 98.2 1.2E-06 4.1E-11 75.4 4.7 39 180-221 43-81 (146)
34 1z6c_A Vitamin K-dependent pro 98.2 1.4E-06 4.6E-11 68.3 4.6 44 184-229 2-45 (87)
35 1aut_L Activated protein C; se 98.1 2E-06 6.9E-11 70.7 3.7 67 182-254 3-86 (114)
36 2w2n_E LDL receptor, low-densi 98.0 2.3E-06 7.7E-11 69.9 2.6 74 174-253 19-99 (107)
37 1tpg_A T-plasminogen activator 98.0 2.7E-06 9.1E-11 67.3 2.6 75 208-291 1-86 (91)
38 4fbr_A Lectin, myxobacterial h 97.9 2.2E-07 7.6E-12 87.6 -6.2 79 177-258 91-202 (267)
39 1yo8_A Thrombospondin-2; EGF, 97.9 1.8E-05 6.2E-10 83.1 7.5 82 175-257 32-145 (634)
40 2y38_A Laminin subunit alpha-5 97.9 1.3E-05 4.5E-10 79.8 6.1 44 259-302 324-384 (403)
41 4aqt_A Laminin subunit gamma-1 97.8 1.4E-05 4.9E-10 79.0 5.4 92 205-310 268-368 (375)
42 1tpg_A T-plasminogen activator 97.7 1.3E-05 4.5E-10 63.3 2.8 69 174-258 7-86 (91)
43 2wg3_C Hedgehog-interacting pr 97.7 5.5E-06 1.9E-10 84.3 0.6 75 209-291 377-455 (463)
44 1nfu_B Coagulation factor XA, 97.7 4.3E-06 1.5E-10 75.5 -0.5 70 180-257 37-120 (195)
45 2c4f_L Coagulation factor VII 97.7 1.2E-05 4.2E-10 68.6 2.0 38 181-221 43-80 (142)
46 2vh0_B Activated factor XA lig 97.7 5.3E-06 1.8E-10 70.2 -0.6 39 180-221 37-75 (134)
47 2p28_B Integrin beta-2; hybrid 97.6 3.4E-05 1.2E-09 70.8 4.3 86 194-290 97-213 (217)
48 2p28_B Integrin beta-2; hybrid 97.5 1.8E-05 6.3E-10 72.5 1.2 51 234-290 98-174 (217)
49 1emn_A Fibrillin; extracellula 97.4 0.00011 3.8E-09 56.6 3.8 44 175-221 32-77 (82)
50 3h5c_B Vitamin K-dependent pro 97.2 0.00019 6.4E-09 68.7 4.5 63 184-254 4-76 (317)
51 2wg3_C Hedgehog-interacting pr 97.2 8.6E-05 2.9E-09 75.4 1.1 74 172-258 380-455 (463)
52 1lmj_A Fibrillin 1; EGF, calci 97.1 0.00011 3.7E-09 57.1 1.1 41 179-221 40-80 (86)
53 1edm_B Factor IX; epidermal gr 97.1 0.00029 9.9E-09 46.3 2.6 35 184-221 2-36 (39)
54 2kl7_A Fibulin-4; secreted, ca 96.9 0.00066 2.3E-08 51.1 3.5 63 183-254 1-64 (71)
55 2w86_A Fibrillin-1, fibrillin1 96.8 0.00024 8.1E-09 60.6 0.7 47 174-222 93-142 (147)
56 3u7u_G Neuregulin 1; signaling 96.8 0.00052 1.8E-08 49.1 2.4 38 181-221 3-46 (55)
57 3v65_B Low-density lipoprotein 96.8 0.00028 9.4E-09 69.4 0.9 70 184-257 2-82 (386)
58 1apq_A Complement protease C1R 96.8 0.00087 3E-08 46.8 3.2 37 183-222 2-46 (53)
59 1aut_L Activated protein C; se 96.7 0.0017 5.7E-08 53.0 5.1 53 174-229 40-95 (114)
60 1gl4_A Nidogen-1, entactin; im 96.7 0.00029 9.8E-09 66.9 -0.1 44 183-229 3-46 (285)
61 3p5b_L Low density lipoprotein 96.6 0.0014 4.7E-08 64.8 4.4 64 186-254 1-71 (400)
62 2k2s_B Micronemal protein 6; m 96.5 0.00079 2.7E-08 49.2 1.5 37 182-221 8-47 (61)
63 1z6c_A Vitamin K-dependent pro 96.5 0.0014 4.8E-08 50.8 2.9 36 179-219 39-76 (87)
64 1uzk_A Fibrillin-1; glycoprote 96.4 0.00067 2.3E-08 58.7 0.5 40 181-222 118-157 (162)
65 1egf_A Epidermal growth factor 96.4 0.0018 6E-08 45.7 2.7 37 184-221 2-41 (53)
66 1x7a_L Coagulation factor IX, 96.3 0.002 6.9E-08 55.0 3.1 53 174-229 74-127 (146)
67 3zyj_B Netrin-G1; cell adhesio 96.3 0.0012 4.1E-08 66.1 1.8 46 305-378 293-338 (426)
68 3h5c_B Vitamin K-dependent pro 96.1 0.0078 2.7E-07 57.3 6.7 53 174-229 31-85 (317)
69 2w2n_E LDL receptor, low-densi 96.1 0.00078 2.7E-08 54.6 -0.6 38 180-221 64-101 (107)
70 3tbd_A Netrin-G2, laminet-2; l 96.0 0.0017 5.9E-08 63.0 1.4 43 308-378 269-311 (338)
71 1dx5_I Thrombomodulin; serine 95.8 0.0014 4.7E-08 53.9 -0.2 39 179-221 74-112 (118)
72 2jkh_L Factor X light chain; p 95.6 0.0042 1.4E-07 44.0 1.7 40 186-228 2-41 (55)
73 1a3p_A Epidermal growth factor 95.6 0.009 3.1E-07 40.4 3.2 27 194-221 10-38 (45)
74 3p5b_L Low density lipoprotein 95.4 0.0066 2.3E-07 59.8 3.1 45 179-227 34-78 (400)
75 1k36_A Epiregulin; EGF-like fo 95.4 0.0056 1.9E-07 41.9 1.6 36 184-221 2-40 (46)
76 2vh0_B Activated factor XA lig 95.2 0.008 2.7E-07 50.4 2.3 53 174-229 68-122 (134)
77 1n7d_A LDL receptor, low-densi 95.1 0.018 6.2E-07 61.0 5.5 65 184-253 293-364 (699)
78 1nfu_B Coagulation factor XA, 95.0 0.0095 3.2E-07 53.5 2.4 53 174-229 68-122 (195)
79 2ygo_A WIF-1, WNT inhibitory f 95.0 0.011 3.9E-07 52.5 2.7 33 226-258 146-180 (188)
80 3tbd_A Netrin-G2, laminet-2; l 94.9 0.0087 3E-07 58.1 1.9 47 259-306 269-316 (338)
81 1nql_B Epidermal growth factor 94.1 0.016 5.3E-07 40.9 1.3 28 193-221 12-41 (53)
82 1kli_L Factor VIIA; extrinsic 94.1 0.022 7.5E-07 42.4 2.2 43 183-228 3-46 (69)
83 3m0c_C LDL receptor, low-densi 93.9 0.029 9.9E-07 60.5 3.4 64 185-253 312-382 (791)
84 3u7u_G Neuregulin 1; signaling 93.5 0.026 9E-07 40.1 1.6 31 260-291 14-49 (55)
85 3ca7_A Protein spitz; argos, E 93.5 0.006 2.1E-07 42.7 -1.8 29 261-290 15-47 (52)
86 1hae_A Heregulin-alpha; growth 93.0 0.054 1.8E-06 39.2 2.6 28 193-221 12-44 (63)
87 1k36_A Epiregulin; EGF-like fo 93.0 0.024 8.2E-07 38.7 0.6 27 232-258 12-43 (46)
88 1n7d_A LDL receptor, low-densi 92.3 0.71 2.4E-05 48.7 11.3 100 181-286 248-364 (699)
89 3v65_B Low-density lipoprotein 92.3 0.044 1.5E-06 53.5 1.8 45 179-227 38-82 (386)
90 2c4f_L Coagulation factor VII 92.3 0.079 2.7E-06 44.6 3.1 52 174-228 73-129 (142)
91 1kig_L Factor XA; glycoprotein 91.7 0.084 2.9E-06 36.6 2.2 28 201-228 11-38 (51)
92 1edm_B Factor IX; epidermal gr 91.5 0.062 2.1E-06 34.8 1.3 29 261-290 10-38 (39)
93 3m0c_C LDL receptor, low-densi 90.8 0.32 1.1E-05 52.3 6.7 100 180-285 265-381 (791)
94 2fd6_A Urokinase-type plasmino 90.4 0.29 1E-05 40.2 4.7 24 198-221 5-31 (122)
95 3ca7_A Protein spitz; argos, E 90.3 0.081 2.8E-06 36.8 1.0 24 198-221 18-45 (52)
96 1egf_A Epidermal growth factor 90.2 0.24 8.3E-06 34.4 3.4 30 261-291 13-44 (53)
97 1a3p_A Epidermal growth factor 89.3 0.17 5.7E-06 33.9 2.0 29 261-290 10-40 (45)
98 2wph_E Coagulation factor IXA 88.7 0.32 1.1E-05 34.7 3.2 28 201-228 12-40 (59)
99 1szb_A Mannose binding lectin- 88.1 0.22 7.6E-06 42.8 2.4 51 175-228 113-167 (170)
100 2e26_A Reelin, reeler protein; 87.9 0.12 4.3E-06 54.6 0.7 42 212-258 521-565 (725)
101 3e50_C Protransforming growth 87.1 0.2 6.8E-06 34.8 1.2 24 234-257 16-44 (50)
102 1g1s_A P-selectin; selectin, l 86.9 0.16 5.6E-06 43.0 0.8 28 193-221 125-152 (162)
103 3ltf_D Protein spitz; receptor 85.4 0.22 7.6E-06 35.5 0.8 27 194-221 15-45 (58)
104 2rnl_A Amphiregulin; AR, color 85.2 0.26 9E-06 34.2 1.0 26 232-257 18-48 (50)
105 2bz6_L Blood coagulation facto 85.1 0.37 1.3E-05 33.6 1.8 28 201-228 12-40 (53)
106 1ob1_C Major merozoite surface 82.7 0.79 2.7E-05 36.4 2.9 29 198-228 14-43 (99)
107 1xdt_R Hbegf, heparin-binding 82.5 0.53 1.8E-05 35.9 1.7 25 233-257 47-76 (79)
108 1hae_A Heregulin-alpha; growth 82.4 0.47 1.6E-05 34.0 1.4 31 260-291 12-47 (63)
109 1iox_A Betacellulin; EGF-like 82.0 0.27 9.4E-06 34.0 -0.0 25 234-258 16-45 (50)
110 1nql_B Epidermal growth factor 81.3 0.36 1.2E-05 33.7 0.4 14 244-257 30-43 (53)
111 1n1i_A Merozoite surface prote 81.3 0.97 3.3E-05 36.2 3.0 30 198-229 20-50 (105)
112 2e26_A Reelin, reeler protein; 81.1 0.27 9.4E-06 52.0 -0.4 41 245-290 520-564 (725)
113 2k2s_B Micronemal protein 6; m 78.2 0.47 1.6E-05 34.3 0.2 23 266-289 25-48 (61)
114 3e50_C Protransforming growth 78.0 1.1 3.8E-05 31.0 2.0 18 350-368 28-45 (50)
115 1q4g_A Prostaglandin G/H synth 78.0 0.83 2.8E-05 47.1 2.1 34 185-221 2-37 (553)
116 3v64_C Agrin; beta propeller, 77.1 1.1 3.7E-05 42.8 2.5 39 185-227 1-39 (349)
117 2rnl_A Amphiregulin; AR, color 76.5 2 6.8E-05 29.7 3.0 23 199-221 22-46 (50)
118 3cfw_A L-selectin; EGF, cell a 73.9 1 3.6E-05 37.9 1.3 27 194-221 126-152 (164)
119 3f1s_B Vitamin K-dependent pro 73.3 2.1 7.2E-05 39.6 3.4 42 184-228 1-43 (283)
120 1nzi_A Complement C1S componen 72.9 1.9 6.4E-05 36.2 2.6 37 182-221 114-151 (159)
121 3nt1_A Prostaglandin-endoperox 71.1 1.4 4.8E-05 45.7 1.7 34 185-221 1-36 (587)
122 2fd6_A Urokinase-type plasmino 70.9 2.8 9.7E-05 34.2 3.2 14 244-257 20-33 (122)
123 3al9_A Plexin-A2; beta-propell 69.5 1.2 4.1E-05 45.7 0.8 22 104-125 479-502 (539)
124 2ygo_A WIF-1, WNT inhibitory f 68.1 2.4 8.2E-05 37.5 2.3 28 260-291 153-180 (188)
125 1g1s_A P-selectin; selectin, l 66.9 1.1 3.8E-05 37.7 -0.1 26 237-262 131-159 (162)
126 3fl7_A Ephrin receptor; ATP-bi 66.2 2 6.8E-05 44.1 1.6 47 261-310 251-299 (536)
127 3ltf_D Protein spitz; receptor 65.6 1 3.5E-05 32.0 -0.5 29 261-290 15-47 (58)
128 2hey_R Tumor necrosis factor r 62.4 2.5 8.5E-05 35.5 1.2 27 350-377 79-112 (146)
129 2p26_A Integrin beta-2; hybrid 61.8 2.1 7.3E-05 40.2 0.8 21 236-257 201-221 (280)
130 4fww_A Macrophage-stimulating 60.9 2 6.8E-05 43.8 0.4 21 105-125 485-508 (527)
131 2p26_A Integrin beta-2; hybrid 59.8 3.8 0.00013 38.4 2.1 25 105-131 2-29 (280)
132 4fww_A Macrophage-stimulating 59.5 3.9 0.00013 41.6 2.3 31 43-79 485-515 (527)
133 1olz_A Semaphorin 4D; developm 58.5 2.3 7.7E-05 44.8 0.3 22 104-125 480-503 (663)
134 1iox_A Betacellulin; EGF-like 57.6 3.3 0.00011 28.4 0.9 18 350-368 28-45 (50)
135 3ol2_B Plexin-B1; beta-propell 57.3 2.7 9.2E-05 43.1 0.6 22 104-125 464-487 (528)
136 1g1t_A E-selectin; EGF, adhesi 53.7 3 0.0001 34.6 0.2 28 193-221 125-152 (157)
137 1xdt_R Hbegf, heparin-binding 53.0 4.9 0.00017 30.5 1.3 26 194-221 47-74 (79)
138 2i9a_A Urokinase-type plasmino 51.2 14 0.00048 30.9 4.1 27 194-221 14-43 (145)
139 3cfw_A L-selectin; EGF, cell a 51.0 3.6 0.00012 34.5 0.3 26 234-259 127-156 (164)
140 3al9_A Plexin-A2; beta-propell 50.5 4.5 0.00015 41.5 1.0 32 43-79 480-511 (539)
141 2ddu_A Reelin; beta-jelly-roll 48.6 3.5 0.00012 40.5 -0.2 28 230-258 194-224 (387)
142 3v4v_B Integrin beta-7; cell a 43.9 4.8 0.00016 40.8 0.0 27 104-132 24-51 (503)
143 1olz_A Semaphorin 4D; developm 42.4 7.7 0.00026 40.8 1.3 32 43-79 481-512 (663)
144 3ol2_B Plexin-B1; beta-propell 41.1 8.9 0.00031 39.2 1.5 32 43-79 465-496 (528)
145 4gz8_A Semaphorin-3A; multi-do 39.9 7.8 0.00027 40.8 0.9 22 104-125 498-522 (667)
146 3nvq_A Semaphorin-7A; beta-pro 39.0 7.9 0.00027 40.1 0.7 22 104-125 447-471 (590)
147 3vi3_B Integrin beta-1; beta p 39.0 12 0.00039 37.6 1.8 24 107-132 10-34 (454)
148 3nvn_B Plexin-C1; beta-propell 38.1 15 0.00053 36.9 2.6 32 43-79 420-451 (476)
149 3nvn_B Plexin-C1; beta-propell 36.1 10 0.00035 38.1 1.0 22 104-125 419-442 (476)
150 3oky_A Plexin-A2; transmembran 35.6 13 0.00046 39.1 1.8 33 42-79 478-510 (681)
151 3nt1_A Prostaglandin-endoperox 35.1 11 0.00037 39.1 1.0 27 232-258 7-39 (587)
152 3asi_A Neurexin-1-alpha; beta- 34.5 22 0.00077 34.3 3.1 38 181-221 180-219 (410)
153 3fl7_A Ephrin receptor; ATP-bi 32.4 8.5 0.00029 39.4 -0.4 29 350-379 261-291 (536)
154 4a0p_A LRP6, LRP-6, low-densit 32.3 20 0.00068 37.1 2.4 42 183-227 263-305 (628)
155 1ijq_A LDL receptor, low-densi 32.0 29 0.00099 32.0 3.3 35 184-221 266-309 (316)
156 3fby_A COMP, cartilage oligome 31.6 24 0.00082 36.1 2.8 35 186-221 19-55 (551)
157 1g1t_A E-selectin; EGF, adhesi 31.4 7.9 0.00027 31.9 -0.7 22 237-258 131-155 (157)
158 1q4g_A Prostaglandin G/H synth 31.3 15 0.00053 37.6 1.4 31 260-291 8-40 (553)
159 3oky_B Putative uncharacterize 29.9 14 0.00049 38.0 0.9 22 104-125 498-522 (565)
160 3oky_B Putative uncharacterize 29.7 19 0.00066 37.0 1.8 34 42-80 498-532 (565)
161 3qd6_R CD40L receptor, tumor n 29.5 45 0.0016 28.6 3.9 15 362-376 119-133 (177)
162 2uwi_A CRME protein; receptor, 26.8 13 0.00046 30.9 -0.0 23 288-310 37-60 (142)
163 1jma_B Herpesvirus entry media 26.4 31 0.001 29.3 2.2 14 364-377 122-135 (167)
164 3v4v_B Integrin beta-7; cell a 26.0 14 0.00049 37.4 0.0 26 41-72 23-48 (503)
165 2i9a_A Urokinase-type plasmino 25.3 29 0.00099 29.0 1.8 14 244-257 32-45 (145)
166 1n8y_C Protooncoprotein; tyros 21.0 25 0.00086 36.4 0.7 26 351-376 560-586 (608)
167 1gl4_A Nidogen-1, entactin; im 20.8 21 0.00071 33.5 -0.0 24 261-285 14-37 (285)
168 3vi3_B Integrin beta-1; beta p 20.8 36 0.0012 34.0 1.7 22 45-72 10-31 (454)
169 3nvq_A Semaphorin-7A; beta-pro 20.4 33 0.0011 35.5 1.4 31 42-79 447-478 (590)
170 3s94_A LRP-6, low-density lipo 20.3 39 0.0013 34.8 1.9 35 184-221 577-611 (619)
No 1
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.65 E-value=8.8e-17 Score=141.98 Aligned_cols=128 Identities=31% Similarity=0.721 Sum_probs=100.2
Q ss_pred CCCeeecCC--CCccc-ccCCCceecCCCCCccccCCCCCcCCcccCCCccccCCCccccccc--------ccCCCCCC-
Q psy9822 198 QSEQCVDLA--DGFEC-VCGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGVNCS--------IQCQCNGH- 265 (380)
Q Consensus 198 ~~g~C~n~~--~g~~C-~C~~Gy~G~~~~~~C~~~C~~~C~~G~C~~~~~C~C~~G~~G~~C~--------~~c~C~~~- 265 (380)
+.++|+..+ +.++| .|++||+|.. |+ .|.+||+|..+. ++|+|+++
T Consensus 5 ~~g~C~~~~~~g~~~C~~C~~g~~G~~----Ce------------------~C~~g~~g~~~~~~~~~~~C~~C~C~~~~ 62 (162)
T 1klo_A 5 GGSSCAIVPKTKEVVCTHCPTGTAGKR----CE------------------LCDDGYFGDPLGSNGPVRLCRPCQCNDNI 62 (162)
T ss_dssp TTCCEEECSSSCCEEECSCCTTEESTT----SC------------------EECTTEEEETTCTTSSCEEEEECCSTTCB
T ss_pred CcCcccccCCCCCEEeCCCCCCCcCCC----Cc------------------CCCCCCcCCcccccCCCCCCeeCcCCCCC
Confidence 567787655 57899 7999999976 33 367778775443 25788877
Q ss_pred -----CcccCCCCCcccccCCCCCCCCCCCCCCCCccCCCCC---CCCCcCCCCccCCCCC-----cccccccCCCCCCC
Q psy9822 266 -----ADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRD---NGECVPCSEYCNGHTG-----LCINASLASLPFSP 332 (380)
Q Consensus 266 -----~~C~~~~~~g~C~~C~~~~~G~~C~~C~~g~~G~~~~---~~~C~~C~~~Cng~~~-----~C~~~~~~~~p~~~ 332 (380)
+.|.. .+++|++|+++|+|.+|++|++||||++.. ...|++|. |+.++. .|+
T Consensus 63 ~~~~~~~C~~--~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~--C~~~Gs~~~~~~Cd----------- 127 (162)
T 1klo_A 63 DPNAVGNCNR--LTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACA--CNPYGTVQQQSSCN----------- 127 (162)
T ss_dssp CTTCSCCBCT--TTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECC--CCTTTBGGGCCCCC-----------
T ss_pred CcccCCcccC--CCCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeecc--CCCCCccCCCCCCC-----------
Confidence 35753 578996699999999999999999999865 35699999 987652 232
Q ss_pred CCCCcccccccccCCCCCCcccccCCCCCCCCCCCcCCCCCCCCCCC
Q psy9822 333 ESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEGKENRQSR 379 (380)
Q Consensus 333 ~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce~C~~Gy~g~~~~ 379 (380)
..+++|+ |+++|+|++|++|++|||++.+.
T Consensus 128 ----------------~~tG~C~-C~~g~~G~~Cd~C~~g~~g~~~~ 157 (162)
T 1klo_A 128 ----------------PVTGQCQ-CLPHVSGRDCGTCDPGYYNLQSG 157 (162)
T ss_dssp ----------------TTTCCCC-BCTTEESTTCCEECTTCBCGGGS
T ss_pred ----------------CCCCEeE-CCCCCcCCCCCCCCCCcccCCCC
Confidence 1568999 99999999999999999998764
No 2
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=99.39 E-value=1.8e-13 Score=136.51 Aligned_cols=109 Identities=31% Similarity=0.700 Sum_probs=79.3
Q ss_pred cCCCCCCCc-ccCCC----CCcccccCCCCCCCCCCCCCCCCccCCCC------CCCCCcCCCCccCCCCCcccccccCC
Q psy9822 259 QCQCNGHAD-CAGPD----KLDVCLRCHNHTKGPQCDKCEPLYVGDPR------DNGECVPCSEYCNGHTGLCINASLAS 327 (380)
Q Consensus 259 ~c~C~~~~~-C~~~~----~~g~C~~C~~~~~G~~C~~C~~g~~G~~~------~~~~C~~C~~~Cng~~~~C~~~~~~~ 327 (380)
+|.|++|+. |.... ..++| .|+++|+|.+|++|++||+|+|. ....|++|. |++|+..|+.+...-
T Consensus 265 ~C~CnGHA~~C~~~~~~~~~~g~C-~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~--Cnghs~~C~~d~~~~ 341 (403)
T 2y38_A 265 RCVCHGHADVCDAKDPLDPFRLQC-ACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCN--CHGHAYDCYYDPEVD 341 (403)
T ss_dssp ECCCTTBCSCEEESCTTSTTCEEE-CCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCC--CTTSCSCEEECHHHH
T ss_pred ccccCCCccccCCCCCCCccceEe-ECcCcCcCCCCCCCCccccCCcccccccCCCccccccc--cCCCCcccccCcccc
Confidence 588999987 96321 24679 59999999999999999999974 235799999 999999896422100
Q ss_pred CCCCCCCCCcccccccccCCCCCCcccccCCCCCCCCCCCcCCCCCCCCCCC
Q psy9822 328 LPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEGKENRQSR 379 (380)
Q Consensus 328 ~p~~~~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce~C~~Gy~g~~~~ 379 (380)
......+.. .....+++|++|+++++|.+||+|++||||++..
T Consensus 342 ~~~~s~~~~---------~~~~~~G~C~~C~~nt~G~~CErC~~GYyg~p~~ 384 (403)
T 2y38_A 342 RREASQNQD---------NVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ 384 (403)
T ss_dssp HTTCCCCTT---------SCSCCCEEESSCCSSEESTTSCEECTTCEECTTS
T ss_pred ccccccccc---------ccCCCCCCCCCCcCcCcCCCCCcCCCCccCCCCC
Confidence 000000000 0012579998899999999999999999998764
No 3
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.33 E-value=3.4e-13 Score=118.89 Aligned_cols=90 Identities=34% Similarity=0.777 Sum_probs=73.9
Q ss_pred CCCCCCCcccCCC--CCcccccCCCCCCCCCCCCCCCCccCCCCCC----CCCcCCCCccCCCCC-----cccccccCCC
Q psy9822 260 CQCNGHADCAGPD--KLDVCLRCHNHTKGPQCDKCEPLYVGDPRDN----GECVPCSEYCNGHTG-----LCINASLASL 328 (380)
Q Consensus 260 c~C~~~~~C~~~~--~~g~C~~C~~~~~G~~C~~C~~g~~G~~~~~----~~C~~C~~~Cng~~~-----~C~~~~~~~~ 328 (380)
|+|.++++|+... +.++|+.|+++|+|.+|++|+++|||++... ..|++|. |+++++ .|+
T Consensus 1 C~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~--C~~~~~~~~~~~C~------- 71 (162)
T 1klo_A 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQ--CNDNIDPNAVGNCN------- 71 (162)
T ss_dssp CCSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECC--STTCBCTTCSCCBC-------
T ss_pred CcCcCcCcccccCCCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCc--CCCCCCcccCCccc-------
Confidence 5788899997543 4689966999999999999999999988642 4799999 998753 221
Q ss_pred CCCCCCCCcccccccccCCCCCCcccccCCCCCCCCCCCcCCCCCCCCCC
Q psy9822 329 PFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEGKENRQS 378 (380)
Q Consensus 329 p~~~~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce~C~~Gy~g~~~ 378 (380)
..+++|++|+++|+|++||+|++||||++.
T Consensus 72 --------------------~~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~ 101 (162)
T 1klo_A 72 --------------------RLTGECLKCIYNTAGFYCDRCKEGFFGNPL 101 (162)
T ss_dssp --------------------TTTCCBCCBCTTEETTTTCEECTTEEECTT
T ss_pred --------------------CCCCcccCCCCCCcCCCcCcCchhhcCCcc
Confidence 156899669999999999999999999864
No 4
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.32 E-value=1.3e-12 Score=111.40 Aligned_cols=105 Identities=27% Similarity=0.690 Sum_probs=84.0
Q ss_pred CCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcc-cc--CC-CCCc-CCcccC---CCccccCCCcc
Q psy9822 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV-PV--CS-QGCV-RGVCSE---PDKCQCDFGYV 252 (380)
Q Consensus 181 ~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~-~~--C~-~~C~-~G~C~~---~~~C~C~~G~~ 252 (380)
+|.|+|||..+.++|. ++++|+++.++|+|.|++||+|.. |+ .+ |. ..|. +++|+. .++|.|++||+
T Consensus 1 Sc~dideC~~~~~~C~-~~g~C~~~~g~~~C~C~~Gy~G~~----C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~ 75 (135)
T 2vj3_A 1 SAQDVDECSLGANPCE-HAGKCINTLGSFECQCLQGYTGPR----CEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYE 75 (135)
T ss_dssp --CCCCTTTSSSCSSS-TTCEEEECSSSEEEECCTTEESTT----SCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEE
T ss_pred CCcccccccCCCCCCC-CCCEeECCCCCEEEECCCCCcCCc----ccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCc
Confidence 4789999987778998 789999999999999999999986 53 22 53 4576 478986 35999999999
Q ss_pred cccccc------cCCCCCCCcccCCCCCcccccCCCCCCCCCCCC
Q psy9822 253 GVNCSI------QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291 (380)
Q Consensus 253 G~~C~~------~c~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~~ 291 (380)
|..|++ ..+|..+++|++..+.+.|. |+++|+|.+|+.
T Consensus 76 G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~-C~~G~~G~~C~~ 119 (135)
T 2vj3_A 76 GVHCEVNTDECASSPCLHNGRCLDKINEFQCE-CPTGFTGHLCQV 119 (135)
T ss_dssp SSSSCEECCTTTTCCSTTTCEEEECSSCEEEE-CCTTEESSSSCE
T ss_pred CCcceecCCcccCCCcCCCCEeECCCCCeEEE-CCCCCcCCccCc
Confidence 999973 23577778898777889994 999999988863
No 5
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.31 E-value=2.1e-12 Score=125.98 Aligned_cols=86 Identities=29% Similarity=0.791 Sum_probs=71.2
Q ss_pred CCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc-CCCCCc-CCcccCCCccccCCCccccccccc---CCCCCCCc
Q psy9822 193 HTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-CSQGCV-RGVCSEPDKCQCDFGYVGVNCSIQ---CQCNGHAD 267 (380)
Q Consensus 193 ~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~-C~~~C~-~G~C~~~~~C~C~~G~~G~~C~~~---c~C~~~~~ 267 (380)
..|. ++|+|++ .++|.|++||+|+. |+.. |...|. +|+|+.+++|.|++||+|..|+.. ..|.++++
T Consensus 153 ~~C~-~~G~C~~---~~~C~C~~G~~G~~----C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~ 224 (324)
T 2ygq_A 153 GGCR-NGGFCNE---RRICECPDGFHGPH----CEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGT 224 (324)
T ss_dssp SCCC-SSCEECT---TSCEECCTTEESSS----SCEESSSSCCCTTCEECSSCCEECCTTCBTTTTCBCCCSSCCCSSCC
T ss_pred CCCC-CCCEECC---CCeEECCCCCcCCC----CCCCCCCCCCCCCCEEcCCCEEeCCCCccCCCcccCcCCCCCCCCCe
Confidence 3576 7788975 58999999999987 6654 777787 689998899999999999999852 36778888
Q ss_pred ccCCCCCcccccCCCCCCCCCCC
Q psy9822 268 CAGPDKLDVCLRCHNHTKGPQCD 290 (380)
Q Consensus 268 C~~~~~~g~C~~C~~~~~G~~C~ 290 (380)
|.. .+.|. |.++|+|..|+
T Consensus 225 C~~---~~~C~-C~~G~~G~~C~ 243 (324)
T 2ygq_A 225 CFY---PGKCI-CPPGLEGEQCE 243 (324)
T ss_dssp BSC---SSCBC-CCTTCCTTTTC
T ss_pred eCC---CCeee-CCCCccCCCCC
Confidence 975 68895 99999999887
No 6
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.26 E-value=3.2e-12 Score=128.94 Aligned_cols=120 Identities=31% Similarity=0.762 Sum_probs=88.6
Q ss_pred CcccccCCCceecCCCCCccccCCCCCc-CCcccC-CCccccCCCcccccccccC-----------CCCCCCcccC----
Q psy9822 208 GFECVCGRGYNKSEEGGECVPVCSQGCV-RGVCSE-PDKCQCDFGYVGVNCSIQC-----------QCNGHADCAG---- 270 (380)
Q Consensus 208 g~~C~C~~Gy~G~~~~~~C~~~C~~~C~-~G~C~~-~~~C~C~~G~~G~~C~~~c-----------~C~~~~~C~~---- 270 (380)
.+.|.|++||+|+. |+..|. .|. +|+|.. .++|+|++||+|.+|+..| .|..+..|.+
T Consensus 184 ~~~c~C~~g~~G~~----C~~~C~-~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C 258 (423)
T 2gy5_A 184 LIVRRCEAQKWGPE----CNHLCT-ACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFC 258 (423)
T ss_dssp EEECSSCTTEESTT----SCEECC-CCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEE
T ss_pred ccCCcCCCCCCCCC----CCCCCC-CCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEE
Confidence 45689999999987 665553 566 589987 7899999999999998531 2333333432
Q ss_pred CCCCcccccCCCCCCCCCCCC-CCCCccCCCCCCCCCcCCCCccCCCCCcccccccCCCCCCCCCCCcccccccccCCCC
Q psy9822 271 PDKLDVCLRCHNHTKGPQCDK-CEPLYVGDPRDNGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPT 349 (380)
Q Consensus 271 ~~~~g~C~~C~~~~~G~~C~~-C~~g~~G~~~~~~~C~~C~~~Cng~~~~C~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 349 (380)
..+.+.|. |.++|+|.+|+. |.+||+|+... .+|. |++ ++.|+.
T Consensus 259 ~~~~~~C~-C~~G~~G~~C~~~C~~G~~G~~C~----~~C~--C~n-gg~C~~--------------------------- 303 (423)
T 2gy5_A 259 LPDPYGCS-CATGWKGLQCNEACHPGFYGPDCK----LRCS--CNN-GEMCDR--------------------------- 303 (423)
T ss_dssp ETTTTEEE-CCBTCBSGGGCBCCCTTBCSBTTC----CBCC--CTT-CCEEET---------------------------
T ss_pred CCCCCeEE-eCCCcccccccCccCCCCcCCccc----cccc--CCC-CCEecC---------------------------
Confidence 13578995 999999999996 99999996543 1455 763 456752
Q ss_pred CCcccccCCCCCCCCCCCcC
Q psy9822 350 TRARCMHCGNHTTGPKCEDC 369 (380)
Q Consensus 350 ~~g~C~~C~~g~~G~~Ce~C 369 (380)
...|. |+++|+|.+||++
T Consensus 304 -~~~C~-C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 304 -FQGCL-CSPGWQGLQCERE 321 (423)
T ss_dssp -TTEEE-CCTTCBSTTSCBC
T ss_pred -CCceE-CCCCCcCCCCccC
Confidence 12399 9999999999987
No 7
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=99.17 E-value=6.9e-12 Score=124.33 Aligned_cols=99 Identities=34% Similarity=0.827 Sum_probs=77.3
Q ss_pred cCCCCCCCc-cc-CCCCCcccccCCCCCCCCCCCCCCCCccCCCCC------CCCCcCCCCccCCCCCcccccccCCCCC
Q psy9822 259 QCQCNGHAD-CA-GPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRD------NGECVPCSEYCNGHTGLCINASLASLPF 330 (380)
Q Consensus 259 ~c~C~~~~~-C~-~~~~~g~C~~C~~~~~G~~C~~C~~g~~G~~~~------~~~C~~C~~~Cng~~~~C~~~~~~~~p~ 330 (380)
.|.|++|+. |. .....+.| .|+++|+|.+|++|++||++++.. ...|.+|. |++++..|+....
T Consensus 254 ~C~Cngh~s~c~~~~~~~~~C-~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~--Cn~~g~~C~~d~~----- 325 (375)
T 4aqt_A 254 RCKCNGHASECVKNEFDKLMC-NCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCD--CNGRSQECYFDPE----- 325 (375)
T ss_dssp EECCTTSCSCEEECTTSCEEE-CCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCC--GGGSCSCEEECHH-----
T ss_pred eecCCCCCcccCCCCCCCeee-eCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCc--CcCCCCCcccccc-----
Confidence 488999986 43 22345678 599999999999999999999743 45799999 9999988864221
Q ss_pred CCCCCCcccccccccCCCCCCcccccCCCCCCCCCCCcCCCCCCCCCC
Q psy9822 331 SPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEGKENRQS 378 (380)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce~C~~Gy~g~~~ 378 (380)
+. .....+|+|.+|++||+|.+||+|++||||++.
T Consensus 326 ---------~~----~c~~~~G~C~~C~~n~~G~~Ce~C~~Gyyg~~~ 360 (375)
T 4aqt_A 326 ---------LY----RSTGHGGHCTNCRDNTDGAKCERCRENFFRLGN 360 (375)
T ss_dssp ---------HH----HHSSCCEEECSCTTTEESTTSCEECSSEECCTT
T ss_pred ---------cC----ccCCCCCCCCCCCCCCcCCCCCCCCcCcccCcC
Confidence 00 011257999779999999999999999999875
No 8
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.06 E-value=5.8e-11 Score=105.04 Aligned_cols=142 Identities=28% Similarity=0.637 Sum_probs=97.0
Q ss_pred CCCCccCCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc-CCCCC--cCCcccCCCccccCC
Q psy9822 173 DSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-CSQGC--VRGVCSEPDKCQCDF 249 (380)
Q Consensus 173 ~~~~w~~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~-C~~~C--~~G~C~~~~~C~C~~ 249 (380)
..++|.|..|.. +|.. ...|. .+++|.. ..+|.|++||+|+. |+.. |...| .+|.|+.+++|+|++
T Consensus 21 C~~g~~G~~C~~--~C~~-~~~c~-~~g~C~~---~g~C~C~~G~~G~~----C~~~~C~~~C~~~~g~C~~~~~C~C~~ 89 (169)
T 2vj2_A 21 CDDYYYGFGCNK--FCRP-RDDFF-GHYACDQ---NGNKTCMEGWMGPE----CNRAICRQGCSPKHGSCKLPGDCRCQY 89 (169)
T ss_dssp CCTTEETTTTCE--ECCC-EEETT-EEEEECS---SCCEEECTTEESTT----SCEECCCTTCCTTTEECSSTTCCEECT
T ss_pred CCCcCcCCCccc--ccCC-CCCcC-CCCEeCC---CCeeECCCCCcCCC----CCCCCCCCCCCCCCcccCCCCeeECCC
Confidence 467899988864 4521 12333 4567753 56899999999987 6644 87777 589999889999999
Q ss_pred Ccccccccc---cCCCCCCCcccCCCCCcccccCCCCCCCCCCCCCCCCccCCCCCCCCCcC-CCCccCCCCCccccccc
Q psy9822 250 GYVGVNCSI---QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVP-CSEYCNGHTGLCINASL 325 (380)
Q Consensus 250 G~~G~~C~~---~c~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~~C~~g~~G~~~~~~~C~~-C~~~Cng~~~~C~~~~~ 325 (380)
||+|..|+. ...|. +++|+ +.++|. |.++|+|..|+.-. ..|.. .. |. ++++|+...
T Consensus 90 G~~G~~C~~C~~~~~C~-~g~C~---~~~~C~-C~~G~~G~~C~~~~----------~~C~~~~~--C~-~~g~C~~~~- 150 (169)
T 2vj2_A 90 GWQGLYCDKCIPHPGCV-HGICN---EPWQCL-CETNWGGQLCDKDL----------NYCGTHQP--CL-NGGTCSNTG- 150 (169)
T ss_dssp TEESSSSCEECCCTTCS-SEECS---STTCCE-ECTTEETTTTCEES----------CHHHHTCC--CC-TTCEEEECS-
T ss_pred CCCCCCcccCCCCCCCC-CCCcC---CCCEEe-CCCCCCCCcccCCC----------CCCCCCCC--CC-CCCEEcCCC-
Confidence 999999974 11143 34776 368884 88888888886321 12321 22 54 345675310
Q ss_pred CCCCCCCCCCCcccccccccCCCCCCcccccCCCCCCCCCCCc
Q psy9822 326 ASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCED 368 (380)
Q Consensus 326 ~~~p~~~~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce~ 368 (380)
...++|+ |+++|+|.+||.
T Consensus 151 -----------------------~~~~~C~-C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 151 -----------------------PDKYQCS-CPEGYSGPNCEI 169 (169)
T ss_dssp -----------------------TTCEEEE-CCTTCCSTTSCC
T ss_pred -----------------------CCCcEeE-CCCCCcCcCcCC
Confidence 1568999 999999999974
No 9
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.98 E-value=4.4e-10 Score=109.48 Aligned_cols=104 Identities=30% Similarity=0.693 Sum_probs=23.5
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc-CCCCCc-CCcccCCCccccCCCc
Q psy9822 174 SFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-CSQGCV-RGVCSEPDKCQCDFGY 251 (380)
Q Consensus 174 ~~~w~~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~-C~~~C~-~G~C~~~~~C~C~~G~ 251 (380)
.++|.|..|.. ++|. ..|. ++|+|++ .++|.|++||+|+. |+.. |...|. +|+|+..++|.|++||
T Consensus 202 ~~G~~G~~C~~-~~C~---~~C~-~~G~C~~---~~~C~C~~G~~G~~----C~~~~C~~~C~~~g~C~~~~~C~C~~G~ 269 (324)
T 2ygq_A 202 PPGFYGVNCDK-ANCS---TTCF-NGGTCFY---PGKCICPPGLEGEQ----CEISKCPQPCRNGGKCIGKSKCKCSKGY 269 (324)
T ss_dssp CTTCBTTTTCB-CCCS---SCCC-SSCCBSC---SSCBCCCTTCCTTT----TC--------------------------
T ss_pred CCCccCCCccc-CcCC---CCCC-CCCeeCC---CCeeeCCCCccCCC----CCcCcCCCcCCCCCEECCCCEEECCCCC
Confidence 45566666643 2342 3455 5566654 25677777777655 4432 555555 4666666667777777
Q ss_pred cccccccc---CCCCCCCcccCCCCCcccccCCCCCCCCCCCCCC
Q psy9822 252 VGVNCSIQ---CQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293 (380)
Q Consensus 252 ~G~~C~~~---c~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~~C~ 293 (380)
+|..|+++ ..|.++++|.+ .+.|. |.++|+|.+|++..
T Consensus 270 ~G~~C~~~~C~~~C~~~g~C~~---~~~C~-C~~G~~G~~C~~~~ 310 (324)
T 2ygq_A 270 QGDLCSKPVCEPGCGAHGTCHE---PNKCQ-CQEGWHGRHCNKRY 310 (324)
T ss_dssp ---------------------------------------------
T ss_pred cCCCCcCCCCCCCCCCCCEECC---CCEeE-CCCCCcCCCCCCCC
Confidence 77666541 23555666654 46663 66677766665443
No 10
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.92 E-value=2.8e-09 Score=110.13 Aligned_cols=79 Identities=23% Similarity=0.575 Sum_probs=51.8
Q ss_pred CcccccCCCCCCCCCCCCCCCCccCCCCC-CCCCcCCCCccCCCCCcccccccCCCCCCCCCCCcccccccccCCCCCCc
Q psy9822 274 LDVCLRCHNHTKGPQCDKCEPLYVGDPRD-NGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRA 352 (380)
Q Consensus 274 ~g~C~~C~~~~~G~~C~~C~~g~~G~~~~-~~~C~~C~~~Cng~~~~C~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~g 352 (380)
.+.| .|.+++.|.+|++|++||+|.... ...|.+|. |+.++ .|..... -...++
T Consensus 406 ~~~C-~C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~~C~--C~~~g-tc~~~~~---------------------Cd~~tg 460 (525)
T 4aqs_A 406 AGQC-RCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCA--CNPLG-TIPGGNP---------------------CDSETG 460 (525)
T ss_dssp SSCC-CBCTTEETTTTCEECTTEECCCTTSTTSSEECC--CCTTT-BCCSSCC---------------------BCTTTC
T ss_pred CCcc-CCCCCCCCCcccCCCCCCcCCCCCCCCCCccCC--CCCCc-eecCCCc---------------------ccCCCC
Confidence 4667 499999999999999999998754 35688888 88553 3321100 012468
Q ss_pred ccccCCCCCCCCCCCcCCCCCCCCCC
Q psy9822 353 RCMHCGNHTTGPKCEDCVEGKENRQS 378 (380)
Q Consensus 353 ~C~~C~~g~~G~~Ce~C~~Gy~g~~~ 378 (380)
+|+ |+++|+|.+|++|++|||++..
T Consensus 461 ~C~-C~~g~~G~~Ce~C~~G~~g~~~ 485 (525)
T 4aqs_A 461 YCY-CKRLVTGQRCDQCLPQHWGLSN 485 (525)
T ss_dssp CBC-BCTTCCSTTTCC----------
T ss_pred EEE-CCCCCcCCCcccCCCCccCCCC
Confidence 899 9999999999999999999754
No 11
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.92 E-value=1.7e-09 Score=114.85 Aligned_cols=103 Identities=30% Similarity=0.784 Sum_probs=75.5
Q ss_pred CCccCCCCC-CC--------ccccCCC--CCCCCCCCeeecCCCCcccccC----CCceecCCCCCcc---ccCCC----
Q psy9822 175 FSWNYVKCP-PE--------NECLNDH--HTCDPQSEQCVDLADGFECVCG----RGYNKSEEGGECV---PVCSQ---- 232 (380)
Q Consensus 175 ~~w~~~~C~-d~--------deC~~g~--~~C~~~~g~C~n~~~g~~C~C~----~Gy~G~~~~~~C~---~~C~~---- 232 (380)
++|.|..|. ++ ++|.... ..|. .+|+|++ ++|.|. +||+|.. |+ ..|..
T Consensus 464 ~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs-~~G~C~~----g~C~C~~~~~~Gy~G~~----Ce~~~~~C~~~~~~ 534 (690)
T 3fcs_B 464 PGWLGSQCECSEEDYRPSQQDECSPREGQPVCS-QRGECLC----GQCVCHSSDFGKITGKY----CECDDFSCVRYKGE 534 (690)
T ss_dssp TTCCSSSSCCSCC------CCCCSSSSSSCGGG-GSEEECS----SSEEECCCSSCCCBSTT----SCBCSSCCCBSSSS
T ss_pred CCccCCceeeccCccCCccCCcCCCCCCCCCCC-CCCEEEC----CeeEeecCCCCCeeCCC----cCcccCcCcCCCCC
Confidence 456666663 12 5675322 3577 7889984 699999 9999987 54 12652
Q ss_pred CCc-CCcccCCCccccCCCccccccc----c-c------CCCCCCCcccCCCCCcccccC-CCCCCCCCCCCC
Q psy9822 233 GCV-RGVCSEPDKCQCDFGYVGVNCS----I-Q------CQCNGHADCAGPDKLDVCLRC-HNHTKGPQCDKC 292 (380)
Q Consensus 233 ~C~-~G~C~~~~~C~C~~G~~G~~C~----~-~------c~C~~~~~C~~~~~~g~C~~C-~~~~~G~~C~~C 292 (380)
.|. +|+|+. ++|.|++||+|..|+ + . ..|.++++|. .+.|. | .++|+|.+|+.|
T Consensus 535 ~C~~~G~C~~-g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~----~g~C~-C~~~Gy~G~~Ce~C 601 (690)
T 3fcs_B 535 MCSGHGQCSC-GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCE----CGSCV-CIQPGSYGDTCEKC 601 (690)
T ss_dssp BGGGSEEEET-TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEE----TTEEE-CCSTTCBSTTSCBC
T ss_pred CCCCCCEecC-CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEe----CCEEE-CCCCCccCCCcCcC
Confidence 476 789987 899999999999998 1 2 3477788886 36894 9 899999999765
No 12
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.89 E-value=1.4e-10 Score=103.79 Aligned_cols=136 Identities=23% Similarity=0.514 Sum_probs=89.3
Q ss_pred CCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc--CC-----CCCc-CCcccC-C-------CccccCCCcccccc
Q psy9822 193 HTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS-----QGCV-RGVCSE-P-------DKCQCDFGYVGVNC 256 (380)
Q Consensus 193 ~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~--C~-----~~C~-~G~C~~-~-------~~C~C~~G~~G~~C 256 (380)
++|. +++|+++.++|+|.|++||+|.. ...|+++ |. ..|. +++|++ + ++|.|++||+|..+
T Consensus 11 ~pC~--ng~C~~~~g~~~C~C~~G~~g~~-~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~ 87 (186)
T 1z1y_A 11 TICX--NGQLVQMSNHFXCMCNEGLVHLS-ENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED 87 (186)
T ss_dssp CCCB--TEEEEECSSCEEEEECTTEEEEE-TTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT
T ss_pred CCCC--CCEeECCCCCeEeECCCCCccCC-CCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC
Confidence 4565 46999999999999999999972 1347654 64 3477 478975 3 38999999999744
Q ss_pred --cc----cCCCCCCCccc----CCCCCcccccCCCCCCC-----CCCCCCCCCccCCCCCCCCCcCCCCccCCCCCccc
Q psy9822 257 --SI----QCQCNGHADCA----GPDKLDVCLRCHNHTKG-----PQCDKCEPLYVGDPRDNGECVPCSEYCNGHTGLCI 321 (380)
Q Consensus 257 --~~----~c~C~~~~~C~----~~~~~g~C~~C~~~~~G-----~~C~~C~~g~~G~~~~~~~C~~C~~~Cng~~~~C~ 321 (380)
.+ ..+|..+++|+ +..+.+.|. |.++|+| ..|+.- ....|. ..|..+.+.|+
T Consensus 88 ~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~-C~~Gy~g~~~~~~~C~~~---------~~~~C~---~~C~~~~~~C~ 154 (186)
T 1z1y_A 88 TCVLDVCQYXNCGESGECIVEYLSEIQSAGCS-CAIGXVPNPEDEXXCTXT---------GETACQ---LXCNTDNEVCX 154 (186)
T ss_dssp EEEEGGGTTCCCCTTEEEEEEEETTEEEEEEE-ECTEEEEETTTTTEEEEE---------ECCCCC---CCCCTTTEEEE
T ss_pred CCCCCcCcCCCCCCCCEEeeCCcCCCCCceEE-CCCCCcccCCCCCcceEc---------CCCccc---ccccccCccee
Confidence 32 23466677787 555567884 7777766 334210 001222 12522445675
Q ss_pred ccccCCCCCCCCCCCcccccccccCCCCCCcccccCCCCCCCCCCCcCC
Q psy9822 322 NASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCV 370 (380)
Q Consensus 322 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce~C~ 370 (380)
.. ...++|+ |+++|+|..+++=+
T Consensus 155 n~-------------------------~g~y~C~-C~~G~~g~~~~~~~ 177 (186)
T 1z1y_A 155 NV-------------------------EGVYXCQ-CMEGFTFDXEXNVC 177 (186)
T ss_dssp EE-------------------------TTEEEEE-ECTTCEEETTTTEE
T ss_pred cC-------------------------CCCeeeE-CCCCCccCcccccC
Confidence 31 1568999 99999999987643
No 13
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.87 E-value=1.9e-09 Score=95.29 Aligned_cols=105 Identities=27% Similarity=0.682 Sum_probs=80.1
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc-CCCCCcCCcccCCCccccCCCcc
Q psy9822 174 SFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-CSQGCVRGVCSEPDKCQCDFGYV 252 (380)
Q Consensus 174 ~~~w~~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~-C~~~C~~G~C~~~~~C~C~~G~~ 252 (380)
.++|.+..|.. ++|.. .|...++.|++ .++|.|++||+|.. |+.. ....|.+|+|+..++|+|++||+
T Consensus 55 ~~G~~G~~C~~-~~C~~---~C~~~~g~C~~---~~~C~C~~G~~G~~----C~~C~~~~~C~~g~C~~~~~C~C~~G~~ 123 (169)
T 2vj2_A 55 MEGWMGPECNR-AICRQ---GCSPKHGSCKL---PGDCRCQYGWQGLY----CDKCIPHPGCVHGICNEPWQCLCETNWG 123 (169)
T ss_dssp CTTEESTTSCE-ECCCT---TCCTTTEECSS---TTCCEECTTEESSS----SCEECCCTTCSSEECSSTTCCEECTTEE
T ss_pred CCCCcCCCCCC-CCCCC---CCCCCCcccCC---CCeeECCCCCCCCC----cccCCCCCCCCCCCcCCCCEEeCCCCCC
Confidence 35688888853 35632 35424567765 68999999999987 5432 23348888999889999999999
Q ss_pred cccccc-------cCCCCCCCcccCC-CCCcccccCCCCCCCCCCC
Q psy9822 253 GVNCSI-------QCQCNGHADCAGP-DKLDVCLRCHNHTKGPQCD 290 (380)
Q Consensus 253 G~~C~~-------~c~C~~~~~C~~~-~~~g~C~~C~~~~~G~~C~ 290 (380)
|..|++ ..+|.++++|++. .+.++|. |+++|+|.+|+
T Consensus 124 G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~-C~~G~~G~~Ce 168 (169)
T 2vj2_A 124 GQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCS-CPEGYSGPNCE 168 (169)
T ss_dssp TTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEE-CCTTCCSTTSC
T ss_pred CCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeE-CCCCCcCcCcC
Confidence 999983 2578888999874 6789995 99999999886
No 14
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.82 E-value=1.6e-10 Score=103.35 Aligned_cols=113 Identities=24% Similarity=0.613 Sum_probs=84.8
Q ss_pred CCccCC---CCCCCccccCC--CCCCCCCCCeeecCC-----CCcccccCCCceecCCCCCcccc-CC-CCCc-CCccc-
Q psy9822 175 FSWNYV---KCPPENECLND--HHTCDPQSEQCVDLA-----DGFECVCGRGYNKSEEGGECVPV-CS-QGCV-RGVCS- 240 (380)
Q Consensus 175 ~~w~~~---~C~d~deC~~g--~~~C~~~~g~C~n~~-----~g~~C~C~~Gy~G~~~~~~C~~~-C~-~~C~-~G~C~- 240 (380)
.+|.+. .|.++|||... .++|. ++++|+++. ++|+|.|++||+|... .|+.. |. ..|. +++|+
T Consensus 31 ~G~~g~~~~~C~~id~C~~~~~~~~C~-~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~--~C~~d~C~~~~C~~~g~C~~ 107 (186)
T 1z1y_A 31 EGLVHLSENTCEEXNECXXETLGXACG-EFGQCIENPDPAQVNMYXCGCIEGYTLXED--TCVLDVCQYXNCGESGECIV 107 (186)
T ss_dssp TTEEEEETTEEEECCCCSGGGTTSEEE-TTEEEEECSSTTSSCSEEEEECTTEEEETT--EEEEGGGTTCCCCTTEEEEE
T ss_pred CCCccCCCCccCCCCcccCCCCCCCCC-CCCEeecCCCCcCCCCEECCCCCCCccCCC--CCCCCcCcCCCCCCCCEEee
Confidence 456554 79999999744 56798 779999999 8999999999999862 45422 64 3477 68898
Q ss_pred ---C---CCccccCCCccc-----cccccc--C----CC-CCCCcccCCCCCcccccCCCCCCCCCCCC
Q psy9822 241 ---E---PDKCQCDFGYVG-----VNCSIQ--C----QC-NGHADCAGPDKLDVCLRCHNHTKGPQCDK 291 (380)
Q Consensus 241 ---~---~~~C~C~~G~~G-----~~C~~~--c----~C-~~~~~C~~~~~~g~C~~C~~~~~G~~C~~ 291 (380)
+ .++|.|++||+| ..|+.. . +| ..+++|++..+.+.|. |.++|+|..+++
T Consensus 108 ~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~C~-C~~G~~g~~~~~ 175 (186)
T 1z1y_A 108 EYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQ-CMEGFTFDXEXN 175 (186)
T ss_dssp EEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEETTEEEEE-ECTTCEEETTTT
T ss_pred CCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccccccccCcceecCCCCeeeE-CCCCCccCcccc
Confidence 5 359999999999 777642 2 45 5567787767788884 888888877754
No 15
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.81 E-value=2.8e-09 Score=90.88 Aligned_cols=97 Identities=23% Similarity=0.628 Sum_probs=69.9
Q ss_pred CCCCCCCCeeecCC--CCcccccCCCceecCCCC---------Ccccc--CC-CCCc-CCccc-------C---CCcccc
Q psy9822 193 HTCDPQSEQCVDLA--DGFECVCGRGYNKSEEGG---------ECVPV--CS-QGCV-RGVCS-------E---PDKCQC 247 (380)
Q Consensus 193 ~~C~~~~g~C~n~~--~g~~C~C~~Gy~G~~~~~---------~C~~~--C~-~~C~-~G~C~-------~---~~~C~C 247 (380)
++|. ++++|++.. ++|+|.|++||+|..+.. .|..+ |. ..|. +++|+ + .++|.|
T Consensus 6 ~pC~-~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C 84 (143)
T 4d90_A 6 NPCE-NGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKC 84 (143)
T ss_dssp CCCG-GGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEEC
T ss_pred CcCC-CCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeEC
Confidence 4576 788999876 689999999999987411 11111 43 3476 47887 3 459999
Q ss_pred CCCcccccccc------cCCCCCCCcccCCCCCcccccCCCCCCCCCCCC
Q psy9822 248 DFGYVGVNCSI------QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291 (380)
Q Consensus 248 ~~G~~G~~C~~------~c~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~~ 291 (380)
++||+|..|++ ..+|..+++|++..+.+.|. |.++|+|..|+.
T Consensus 85 ~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~-C~~G~~G~~c~~ 133 (143)
T 4d90_A 85 PRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCE-CPGEFMGRNCQY 133 (143)
T ss_dssp CTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEE-CCTTCBSTTSCB
T ss_pred cCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeE-CCCCCccCCcee
Confidence 99999999972 23577778898777788994 999999998864
No 16
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.73 E-value=5.9e-09 Score=105.05 Aligned_cols=98 Identities=26% Similarity=0.610 Sum_probs=75.9
Q ss_pred ccccCCCcccccccccC-CCCCCCcccCCCCCcccccCCCCCCCCCCCC-CCCCccCCCCCCCCCcCCC--CccCCCCCc
Q psy9822 244 KCQCDFGYVGVNCSIQC-QCNGHADCAGPDKLDVCLRCHNHTKGPQCDK-CEPLYVGDPRDNGECVPCS--EYCNGHTGL 319 (380)
Q Consensus 244 ~C~C~~G~~G~~C~~~c-~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~~-C~~g~~G~~~~~~~C~~C~--~~Cng~~~~ 319 (380)
.|.|+.||+|..|+..| +|.++++|.+ ..+.|. |.++|+|.+|+. |.++|+|.... .+|. ..|. +.+.
T Consensus 186 ~c~C~~g~~G~~C~~~C~~C~~~G~C~~--~~g~C~-C~~G~~G~~Ce~~C~~g~~g~~C~----~~C~~~~~C~-~~g~ 257 (423)
T 2gy5_A 186 VRRCEAQKWGPECNHLCTACMNNGVCHE--DTGECI-CPPGFMGRTCEKACELHTFGRTCK----ERCSGQEGCK-SYVF 257 (423)
T ss_dssp ECSSCTTEESTTSCEECCCCCTTCEECT--TTCCEE-CCTTEESTTSCEECCTTEESTTSC----EECCSTTTTT-TCCE
T ss_pred CCcCCCCCCCCCCCCCCCCCCCCCEEEC--CCCcEe-CCCCccCCCcccccCCCCCCCCcC----ccCCCCCCCC-CCCE
Confidence 68999999999999766 5999999985 578995 999999999996 99999986532 1333 1121 1122
Q ss_pred ccccccCCCCCCCCCCCcccccccccCCCCCCcccccCCCCCCCCCCCc-CCCCCCCCC
Q psy9822 320 CINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCED-CVEGKENRQ 377 (380)
Q Consensus 320 C~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce~-C~~Gy~g~~ 377 (380)
|. ...++|. |+++|+|.+|+. |.+||+|..
T Consensus 258 C~---------------------------~~~~~C~-C~~G~~G~~C~~~C~~G~~G~~ 288 (423)
T 2gy5_A 258 CL---------------------------PDPYGCS-CATGWKGLQCNEACHPGFYGPD 288 (423)
T ss_dssp EE---------------------------TTTTEEE-CCBTCBSGGGCBCCCTTBCSBT
T ss_pred EC---------------------------CCCCeEE-eCCCcccccccCccCCCCcCCc
Confidence 32 1468999 999999999996 999999863
No 17
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.72 E-value=6.4e-09 Score=110.47 Aligned_cols=91 Identities=32% Similarity=0.724 Sum_probs=66.6
Q ss_pred CCCCCCCCeeecCCCCcc---cccCCCceecCCCCC-------ccccCCC-----CCc-CCcccCCCccccC----CCcc
Q psy9822 193 HTCDPQSEQCVDLADGFE---CVCGRGYNKSEEGGE-------CVPVCSQ-----GCV-RGVCSEPDKCQCD----FGYV 252 (380)
Q Consensus 193 ~~C~~~~g~C~n~~~g~~---C~C~~Gy~G~~~~~~-------C~~~C~~-----~C~-~G~C~~~~~C~C~----~G~~ 252 (380)
.+|. +.++|.+..+.+. |.|++||+|..+... ....|.. .|. +|+|+ .++|.|+ +||+
T Consensus 440 ~pc~-n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~g~C~C~~~~~~Gy~ 517 (690)
T 3fcs_B 440 QAEP-NSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL-CGQCVCHSSDFGKIT 517 (690)
T ss_dssp TCCT-TCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC-SSSEEECCCSSCCCB
T ss_pred CCCC-CCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE-CCeeEeecCCCCCee
Confidence 3555 6778887777777 999999999985100 0012542 376 68888 5899999 9999
Q ss_pred cccccc---cC------CCCCCCcccCCCCCcccccCCCCCCCCCCC
Q psy9822 253 GVNCSI---QC------QCNGHADCAGPDKLDVCLRCHNHTKGPQCD 290 (380)
Q Consensus 253 G~~C~~---~c------~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~ 290 (380)
|..|+. .| .|.++++|. .+.|. |.++|+|..|+
T Consensus 518 G~~Ce~~~~~C~~~~~~~C~~~G~C~----~g~C~-C~~Gy~G~~Ce 559 (690)
T 3fcs_B 518 GKYCECDDFSCVRYKGEMCSGHGQCS----CGDCL-CDSDWTGYYCN 559 (690)
T ss_dssp STTSCBCSSCCCBSSSSBGGGSEEEE----TTEEE-ECTTEESSSSC
T ss_pred CCCcCcccCcCcCCCCCCCCCCCEec----CCeeE-CcCCCcCCCCc
Confidence 999973 23 366677886 38895 99999999997
No 18
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.68 E-value=1.3e-08 Score=105.14 Aligned_cols=98 Identities=27% Similarity=0.687 Sum_probs=35.1
Q ss_pred Ccc-ccCCCcccccccc-----cCCCCCCCcccCC----CCCcccccCCCCCCCCCCCCCCCCccCCCCCCCCCcCCCCc
Q psy9822 243 DKC-QCDFGYVGVNCSI-----QCQCNGHADCAGP----DKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCSEY 312 (380)
Q Consensus 243 ~~C-~C~~G~~G~~C~~-----~c~C~~~~~C~~~----~~~g~C~~C~~~~~G~~C~~C~~g~~G~~~~~~~C~~C~~~ 312 (380)
..| +|..||+|..|.. .++|+.+++|.+. ..++.|. |+++|+|.+|++|++||++...+...|.+|.
T Consensus 418 ~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~-C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~-- 494 (525)
T 4aqs_A 418 ERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCY-CKRLVTGQRCDQCLPQHWGLSNDLDGCRPCD-- 494 (525)
T ss_dssp TTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBC-BCTTCCSTTTCC---------------------
T ss_pred CcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEE-CCCCCcCCCcccCCCCccCCCCCCCCCcCCC--
Confidence 356 6888988877653 4567766665431 2467895 9999999999999999999877667799998
Q ss_pred cCCCCCcccccccCCCCCCCCCCCcccccccccCCCCCCcccccCCCCCCCCCCCc
Q psy9822 313 CNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCED 368 (380)
Q Consensus 313 Cng~~~~C~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce~ 368 (380)
|+..+ .+... -...+++|. |++||+|++||+
T Consensus 495 C~~~g-s~~~~-----------------------C~~~tG~C~-C~~G~~G~~Ceq 525 (525)
T 4aqs_A 495 CDLGG-ALNNS-----------------------CSEDSGQCS-CLPHMIGRQCNE 525 (525)
T ss_dssp --------------------------------------------------------
T ss_pred CCCCC-ccCCc-----------------------cCCCCCeeE-CCCCCcCCCCCC
Confidence 88542 22210 001457899 999999999985
No 19
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.66 E-value=3.4e-08 Score=104.73 Aligned_cols=104 Identities=30% Similarity=0.799 Sum_probs=74.3
Q ss_pred CCccCCCCC-CCc---------cccCC--CCCCCCCCCeeecCCCCcccccC------CCceecCCCCCcc--cc-CCC-
Q psy9822 175 FSWNYVKCP-PEN---------ECLND--HHTCDPQSEQCVDLADGFECVCG------RGYNKSEEGGECV--PV-CSQ- 232 (380)
Q Consensus 175 ~~w~~~~C~-d~d---------eC~~g--~~~C~~~~g~C~n~~~g~~C~C~------~Gy~G~~~~~~C~--~~-C~~- 232 (380)
++|.|..|. +++ +|... ...|. .+|+|++ .+|.|. +||+|.. |+ .. |..
T Consensus 452 ~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs-~~G~C~~----G~C~C~~~~~~~~G~~G~~----Ce~~~~~C~~~ 522 (687)
T 3k6s_B 452 TGYIGKNCECQTQGRSSQELEGSCRKDNNSIICS-GLGDCVC----GQCLCHTSDVPGKLIYGQY----CECDTINCERY 522 (687)
T ss_dssp SSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGG-SSEEEET----TEEEECCCCSTTCCEESTT----SCEESSCSCEE
T ss_pred CCCcCCcccccCCcCCccccCCCCCCCCCCCcCC-CCCEEeC----CEEEcCCCCCCCCCccccc----cccccccccCC
Confidence 467777775 111 35322 12476 6889984 399999 9999988 54 22 652
Q ss_pred ---CCc---CCcccCCCccccCCCcccccccc-----cC------CCCCCCcccCCCCCcccccCCCCCCCCCCCCCC
Q psy9822 233 ---GCV---RGVCSEPDKCQCDFGYVGVNCSI-----QC------QCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCE 293 (380)
Q Consensus 233 ---~C~---~G~C~~~~~C~C~~G~~G~~C~~-----~c------~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~~C~ 293 (380)
.|. +|+|+. ++|.|.+||+|..|+. .| .|.++++|. .+.|. |.++|+|..|+.|.
T Consensus 523 ~~~~C~~~~~G~C~~-g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~----~g~C~-C~~Gy~G~~Ce~c~ 594 (687)
T 3k6s_B 523 NGQVCGGPGRGLCFC-GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCR----CNVCE-CHSGYQLPLCQECP 594 (687)
T ss_dssp TTEETSHHHHEEEET-TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBC----SSCBC-CSTTCCTTTTCCCT
T ss_pred CCcCcCCCCCCeEEC-CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCC----CCEEE-CCCCCcCCCCCCCC
Confidence 375 588875 6899999999999982 22 477788887 37894 99999999998763
No 20
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.63 E-value=2.2e-08 Score=77.79 Aligned_cols=68 Identities=29% Similarity=0.772 Sum_probs=46.5
Q ss_pred CCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc--CC--CCCcCCcccC---CCccccCCCccc
Q psy9822 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS--QGCVRGVCSE---PDKCQCDFGYVG 253 (380)
Q Consensus 181 ~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~--C~--~~C~~G~C~~---~~~C~C~~G~~G 253 (380)
+|.|+|||.. .+.|. + ++|++++++|+|.|++||++++ ..|+.+ |. +.|.+++|++ .++|.|+.||+|
T Consensus 1 sC~dideC~~-~~~C~-~-g~C~n~~g~y~C~C~~Gy~~~g--~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g 75 (82)
T 1emn_A 1 SAVDMDECKE-PDVCK-H-GQCINTDGSYRCECPFGYILAG--NECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEP 75 (82)
T ss_dssp CCCCCCSSSS-TTSCS-S-SEECCCSSCCCEECCTTEEEET--TEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCC
T ss_pred CCCccccCCC-CCCcC-C-CEEEecCCCEEEECCCCeECCC--CccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEe
Confidence 4789999975 56786 3 8999999999999999998644 346544 42 3344455544 235555555554
No 21
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.62 E-value=4.1e-08 Score=104.11 Aligned_cols=87 Identities=25% Similarity=0.571 Sum_probs=63.4
Q ss_pred CCCCCCCCeeecCCCCcccccCCCceecCCC---C----Cc-cccCCC-----CCc-CCcccCCCccccC------CCcc
Q psy9822 193 HTCDPQSEQCVDLADGFECVCGRGYNKSEEG---G----EC-VPVCSQ-----GCV-RGVCSEPDKCQCD------FGYV 252 (380)
Q Consensus 193 ~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~---~----~C-~~~C~~-----~C~-~G~C~~~~~C~C~------~G~~ 252 (380)
..|. .+|+|. ...|.|.+||+|..+. . .. ...|.. .|. +|+|+ .++|.|+ .||+
T Consensus 435 ~~Cs-~~G~C~----~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~G~C~C~~~~~~~~G~~ 508 (687)
T 3k6s_B 435 SLCH-GKGFLE----CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV-CGQCLCHTSDVPGKLIY 508 (687)
T ss_dssp STGG-GSEEES----SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE-TTEEEECCCCSTTCCEE
T ss_pred CCCC-CCCEEe----CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe-CCEEEcCCCCCCCCCcc
Confidence 4676 677777 3589999999998851 0 00 012432 376 68888 4699999 9999
Q ss_pred cccccc---cCC------CCC--CCcccCCCCCcccccCCCCCCCCCCC
Q psy9822 253 GVNCSI---QCQ------CNG--HADCAGPDKLDVCLRCHNHTKGPQCD 290 (380)
Q Consensus 253 G~~C~~---~c~------C~~--~~~C~~~~~~g~C~~C~~~~~G~~C~ 290 (380)
|..|+. .|. |.+ |++|. .++|. |.++|+|..|+
T Consensus 509 G~~Ce~~~~~C~~~~~~~C~~~~~G~C~----~g~C~-C~~G~~G~~Ce 552 (687)
T 3k6s_B 509 GQYCECDTINCERYNGQVCGGPGRGLCF----CGKCR-CHPGFEGSACQ 552 (687)
T ss_dssp STTSCEESSCSCEETTEETSHHHHEEEE----TTEEE-ECTTCCSTTSC
T ss_pred ccccccccccccCCCCcCcCCCCCCeEE----CCEEE-cCCCCcCCCCc
Confidence 999972 344 777 78887 46895 99999999996
No 22
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.58 E-value=1e-08 Score=85.20 Aligned_cols=96 Identities=26% Similarity=0.692 Sum_probs=67.3
Q ss_pred CCCccccCCCCCCCCCCCeeecC-CCCcccccCCCceecCC-CCCccccCCC-CCcCCcccC--CCccccCCCcc---cc
Q psy9822 183 PPENECLNDHHTCDPQSEQCVDL-ADGFECVCGRGYNKSEE-GGECVPVCSQ-GCVRGVCSE--PDKCQCDFGYV---GV 254 (380)
Q Consensus 183 ~d~deC~~g~~~C~~~~g~C~n~-~~g~~C~C~~Gy~G~~~-~~~C~~~C~~-~C~~G~C~~--~~~C~C~~G~~---G~ 254 (380)
.|+|||. .++|. .+|+++ .++|+|.|++||+|... .+.|+..|.. .|. ++|+. .++|.|+.||+ |.
T Consensus 2 ~dideC~--~~pC~---~~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~-~~C~~~~~y~C~C~~Gy~~~~g~ 75 (118)
T 1dx5_I 2 EPVDPCF--RANCE---YQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACP-ADCDPNTQASCECPEGYILDDGF 75 (118)
T ss_dssp CCCCGGG--GCCCS---SEEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEE-CEECTTSTTCEECCTTEEEETTT
T ss_pred CccccCC--CCCCC---CCCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCC-CcccCCCCeEeECCCCccCCCCC
Confidence 3688994 45786 289999 89999999999999852 2245443422 243 55665 57999999999 77
Q ss_pred ccccc------CCCCCCCcccCCCCCcccccCCCCCCCC
Q psy9822 255 NCSIQ------CQCNGHADCAGPDKLDVCLRCHNHTKGP 287 (380)
Q Consensus 255 ~C~~~------c~C~~~~~C~~~~~~g~C~~C~~~~~G~ 287 (380)
.|... .+| +++|++..+.+.|. |.++|+|.
T Consensus 76 ~C~dideC~~~~~C--~~~C~n~~g~y~C~-C~~G~~g~ 111 (118)
T 1dx5_I 76 ICTDIDECENGGFC--SGVCHNLPGTFECI-CGPDSALA 111 (118)
T ss_dssp EEEECCHHHHCSSC--SSEEEECSSSEEEE-ECSSSSCE
T ss_pred ccccccccCCCCCC--cCeEEeCCCCEEEE-CCCCCccC
Confidence 78532 345 56787777788884 77666543
No 23
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.55 E-value=4.6e-08 Score=82.97 Aligned_cols=95 Identities=31% Similarity=0.734 Sum_probs=68.6
Q ss_pred CCc-CCcccC---CCccccCCCcccccccc------cCCCCCCCcccCCCCCcccccCCCCCCCCCCCCCCCCccCCCCC
Q psy9822 233 GCV-RGVCSE---PDKCQCDFGYVGVNCSI------QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRD 302 (380)
Q Consensus 233 ~C~-~G~C~~---~~~C~C~~G~~G~~C~~------~c~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~~C~~g~~G~~~~ 302 (380)
+|. +|+|++ .++|+|++||+|..|++ ..+|..+++|++..+.+.|. |.++|+|..|+.-.
T Consensus 14 ~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~-C~~G~~G~~C~~~~--------- 83 (135)
T 2vj3_A 14 PCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCI-CMPGYEGVHCEVNT--------- 83 (135)
T ss_dssp SSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEE-CCTTEESSSSCEEC---------
T ss_pred CCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceee-CCCCCcCCcceecC---------
Confidence 465 478876 35999999999999963 23577778898777889995 99999999886321
Q ss_pred CCCCcCCCCccCCCCCcccccccCCCCCCCCCCCcccccccccCCCCCCcccccCCCCCCCCCCC
Q psy9822 303 NGECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCE 367 (380)
Q Consensus 303 ~~~C~~C~~~Cng~~~~C~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce 367 (380)
..|..-. |. ++++|+.. ...++|. |+++|+|.+|+
T Consensus 84 -~~C~~~~--C~-~~g~C~~~-------------------------~g~~~C~-C~~G~~G~~C~ 118 (135)
T 2vj3_A 84 -DECASSP--CL-HNGRCLDK-------------------------INEFQCE-CPTGFTGHLCQ 118 (135)
T ss_dssp -CTTTTCC--ST-TTCEEEEC-------------------------SSCEEEE-CCTTEESSSSC
T ss_pred -CcccCCC--cC-CCCEeECC-------------------------CCCeEEE-CCCCCcCCccC
Confidence 1232222 44 34567531 1468999 99999999997
No 24
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.52 E-value=2.3e-08 Score=100.07 Aligned_cols=92 Identities=33% Similarity=0.692 Sum_probs=43.6
Q ss_pred cCCCCCCC-cccCCCCCcccccCCCCCCCCCCCCCCCCccCCCCCC-----------CCCcCCCCccCCCCCcccccccC
Q psy9822 259 QCQCNGHA-DCAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDN-----------GECVPCSEYCNGHTGLCINASLA 326 (380)
Q Consensus 259 ~c~C~~~~-~C~~~~~~g~C~~C~~~~~G~~C~~C~~g~~G~~~~~-----------~~C~~C~~~Cng~~~~C~~~~~~ 326 (380)
+|.|++|+ .|....+.++|+ |+++|+|.+|++|+++|+++|... ..|++|+ |++++..|+...
T Consensus 296 ~C~CnGHas~C~~~~g~~~C~-C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~--Cn~~g~~CD~~t-- 370 (426)
T 3zyj_B 296 RCKCNLHATVCVYDNSKLTCE-CEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSI--SSIGTNVCDNEL-- 370 (426)
T ss_dssp EECCSSSCSCEEEETTEEEEC-CCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCC--C-------------
T ss_pred cCcCCCchhhcCCCCCCceee-CCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCC--CCCCcCccccCc--
Confidence 58999996 597655668996 999999999999999999887542 3599999 999888886432
Q ss_pred CCCCCCCCCCcccccccccCCCCCCcccccCCCCCCCCCCCcC
Q psy9822 327 SLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDC 369 (380)
Q Consensus 327 ~~p~~~~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce~C 369 (380)
.| ..-+..+ .....|+ |++||+|..|++|
T Consensus 371 -~~--------C~ngg~C----~~~~~C~-C~~G~~G~~Ce~c 399 (426)
T 3zyj_B 371 -LH--------CQNGGTC----HNNVRCL-CPAAYTGILCEKL 399 (426)
T ss_dssp -------------------------------------------
T ss_pred -cc--------CCCCCCc----CCCCCCc-CCCCCcCCCCcCC
Confidence 11 0000001 1123786 8888888888864
No 25
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.39 E-value=1.2e-07 Score=99.56 Aligned_cols=101 Identities=26% Similarity=0.651 Sum_probs=76.3
Q ss_pred CCccccCCCCCCCCCCCeeecCCCC-ccc-ccCCCceecCCCCCcccc--CC-CC--CcC-C---cccC---CCccc-cC
Q psy9822 184 PENECLNDHHTCDPQSEQCVDLADG-FEC-VCGRGYNKSEEGGECVPV--CS-QG--CVR-G---VCSE---PDKCQ-CD 248 (380)
Q Consensus 184 d~deC~~g~~~C~~~~g~C~n~~~g-~~C-~C~~Gy~G~~~~~~C~~~--C~-~~--C~~-G---~C~~---~~~C~-C~ 248 (380)
+++||. .++|. ++++|+++.++ |+| .|++||+|+. ..|+.+ |. .. |.+ + +|++ .++|. |+
T Consensus 2 DIDeC~--~nPC~-~gg~C~n~~~Gsy~C~~C~~GytGdg--~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~ 76 (634)
T 1yo8_A 2 DPDGCL--SNPCF-PGAQCSSFPDGSWSCGFCPVGFLGNG--THCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCP 76 (634)
T ss_dssp --CGGG--GCCSC-TTCCEEECTTSCEEECCCCTTBCSCS--SSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCC
T ss_pred cccccC--CCCCC-CCCEEecCCCCCeECCcCCCccCCCC--CCccccccccCCCCcccCCccccceeeccCceecccCC
Confidence 678994 45898 78899999865 999 9999999865 458766 74 33 874 5 7986 46998 99
Q ss_pred CCccccccc---------------c--c-----CCCCCCCcccCCC----CCcccccCCCCCCC--CCCC
Q psy9822 249 FGYVGVNCS---------------I--Q-----CQCNGHADCAGPD----KLDVCLRCHNHTKG--PQCD 290 (380)
Q Consensus 249 ~G~~G~~C~---------------~--~-----c~C~~~~~C~~~~----~~g~C~~C~~~~~G--~~C~ 290 (380)
+||+|..|+ . . .+|..+++|++.. +.+.| .|+.+|+| ..|+
T Consensus 77 ~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C-~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 77 PRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKC-ECQTGYAGDGLICG 145 (634)
T ss_dssp TTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEE-EECTTEEESSSSEE
T ss_pred CCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceee-eccCCccccCcccc
Confidence 999998754 1 1 2566677888766 78999 59999987 6775
No 26
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.37 E-value=2.9e-07 Score=78.22 Aligned_cols=70 Identities=29% Similarity=0.822 Sum_probs=54.1
Q ss_pred CCCCccccCCCCCCCCCCCeee-------cCCCCcccccCCCceecCCCCCcc-cc--CC-CCCc-CCcccC---CCccc
Q psy9822 182 CPPENECLNDHHTCDPQSEQCV-------DLADGFECVCGRGYNKSEEGGECV-PV--CS-QGCV-RGVCSE---PDKCQ 246 (380)
Q Consensus 182 C~d~deC~~g~~~C~~~~g~C~-------n~~~g~~C~C~~Gy~G~~~~~~C~-~~--C~-~~C~-~G~C~~---~~~C~ 246 (380)
|.++++|. ..+|. ++++|+ ++.++|+|.|++||.|.. |+ .+ |. ..|. +++|++ .++|.
T Consensus 49 c~~~~~C~--~~~C~-~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~----C~~~i~~C~~~~C~~~~~C~~~~g~~~C~ 121 (143)
T 4d90_A 49 PTSAGPCT--PNPCH-NGGTCEISEAYRGDTFIGYVCKCPRGFNGIH----CQHNINECEVEPCKNGGICTDLVANYSCE 121 (143)
T ss_dssp CCCCCTTS--SCCCC-TTCEEEECCCEETTEECCEEEECCTTEESTT----SCEECCTTTTCCSCTTCEEEEETTEEEEE
T ss_pred cccCCcCC--CCCCC-CCCEecCCCccccCCCCCeEeECcCCCcCCC----cccCCCcCCCCCCCCCCEeECCCCCeEeE
Confidence 44566773 34687 789999 777899999999999877 65 33 63 4576 588986 35899
Q ss_pred cCCCcccccccc
Q psy9822 247 CDFGYVGVNCSI 258 (380)
Q Consensus 247 C~~G~~G~~C~~ 258 (380)
|++||+|.+|+.
T Consensus 122 C~~G~~G~~c~~ 133 (143)
T 4d90_A 122 CPGEFMGRNCQY 133 (143)
T ss_dssp CCTTCBSTTSCB
T ss_pred CCCCCccCCcee
Confidence 999999999874
No 27
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.33 E-value=1.9e-07 Score=79.70 Aligned_cols=42 Identities=26% Similarity=0.700 Sum_probs=34.8
Q ss_pred CCCCCCCccccCCC-CCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 179 YVKCPPENECLNDH-HTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 179 ~~~C~d~deC~~g~-~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
+..|.++|||.... +.|. ++++|++++++|+|.|++||+|..
T Consensus 38 ~~~C~dideC~~~~~~~C~-~~~~C~n~~g~y~C~C~~Gy~g~~ 80 (143)
T 2bou_A 38 METCDDINECATLSKVSCG-KFSDCWNTEGSYDCVCSPGYEPVS 80 (143)
T ss_dssp TCCCEECCGGGC----CCC-TTEEEEECSSCEEEEECTTEEETT
T ss_pred CCcCCccccccCCCCCCCC-CCCEEEcCCCCeEeECCCCcccCc
Confidence 36799999997643 3797 789999999999999999999975
No 28
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.32 E-value=1.3e-07 Score=81.22 Aligned_cols=99 Identities=21% Similarity=0.469 Sum_probs=64.9
Q ss_pred CCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc----CCC-----CCc------------------
Q psy9822 183 PPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV----CSQ-----GCV------------------ 235 (380)
Q Consensus 183 ~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~----C~~-----~C~------------------ 235 (380)
.|+|||.. ++|. +++|++++++|+|.|++||+|+.....|+.. |.. .|.
T Consensus 2 ~dideC~~--~pC~--ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~ 77 (147)
T 2w86_A 2 ADIDECES--SPCI--NGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGA 77 (147)
T ss_dssp CCCCGGGG--CCSB--TSEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCS
T ss_pred CcCccCcC--CCCC--CCEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCc
Confidence 37889963 5796 3799999999999999999997643334321 100 011
Q ss_pred --CCcccC-CCccccCCCcc---cccccc-------cCCCCCCCcccCCCCCcccccCCCCCCCC
Q psy9822 236 --RGVCSE-PDKCQCDFGYV---GVNCSI-------QCQCNGHADCAGPDKLDVCLRCHNHTKGP 287 (380)
Q Consensus 236 --~G~C~~-~~~C~C~~G~~---G~~C~~-------~c~C~~~~~C~~~~~~g~C~~C~~~~~G~ 287 (380)
.+.|.. .+.|.|++||+ |..|+. +..|. +++|++..+.+.|. |+++|+|.
T Consensus 78 ~~g~~C~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~-~g~C~n~~g~y~C~-C~~Gy~g~ 140 (147)
T 2w86_A 78 AWGSPCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCK-NGLCVNTRGSFKCQ-CPSGMTLD 140 (147)
T ss_dssp EETTTTEECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSS-SSEEEEETTEEEEE-CCTTCCBC
T ss_pred ccCCCcccCCCcccCCCccccCCCCccCccccccCCCCCCC-CCEEECCCCCEEee-CCCCCccC
Confidence 011211 26789999995 888863 22365 34788777788884 77666654
No 29
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.29 E-value=3.3e-07 Score=78.15 Aligned_cols=91 Identities=26% Similarity=0.572 Sum_probs=65.2
Q ss_pred CCCCCCCeeecCCCCcccccCCCceecC-----CCCCcccc--CCC----CCc-CCcccC---CCccccCCCcccc----
Q psy9822 194 TCDPQSEQCVDLADGFECVCGRGYNKSE-----EGGECVPV--CSQ----GCV-RGVCSE---PDKCQCDFGYVGV---- 254 (380)
Q Consensus 194 ~C~~~~g~C~n~~~g~~C~C~~Gy~G~~-----~~~~C~~~--C~~----~C~-~G~C~~---~~~C~C~~G~~G~---- 254 (380)
.|. ++++|++. |+|.|++||+|.. ....|+.+ |.. .|. +++|++ .++|.|++||+|.
T Consensus 8 ~C~-~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~ 83 (143)
T 2bou_A 8 WCP-QDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAK 83 (143)
T ss_dssp TCC-TTEEESSS---SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCS
T ss_pred cCC-CCCEEcCC---CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCcc
Confidence 465 67889875 8999999999852 12357655 643 587 588986 4599999999987
Q ss_pred --------cccc-------cCCCCCCCcccCCCCCcccccCCCCCCCCCC
Q psy9822 255 --------NCSI-------QCQCNGHADCAGPDKLDVCLRCHNHTKGPQC 289 (380)
Q Consensus 255 --------~C~~-------~c~C~~~~~C~~~~~~g~C~~C~~~~~G~~C 289 (380)
.|.. ..+|..+++|++..+.+.|. |.++|+|...
T Consensus 84 ~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~-C~~Gy~g~~~ 132 (143)
T 2bou_A 84 TFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCR-CRPGWKPRHG 132 (143)
T ss_dssp CBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEE-CCSSSCBCTT
T ss_pred ccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEee-CCCCcccCCC
Confidence 4442 13566667888777888884 7777777654
No 30
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.29 E-value=1.2e-07 Score=82.69 Aligned_cols=72 Identities=29% Similarity=0.658 Sum_probs=47.4
Q ss_pred CCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc----CCC---CCc---CCcccC-------CCcc
Q psy9822 183 PPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV----CSQ---GCV---RGVCSE-------PDKC 245 (380)
Q Consensus 183 ~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~----C~~---~C~---~G~C~~-------~~~C 245 (380)
.|+|||.. .++|. +++|+|++++|+|.|++||++......|+.+ |.. .|. +++|++ .++|
T Consensus 1 ~dideC~~-~~~C~--~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C 77 (162)
T 1uzk_A 1 TDVNECLD-PTTCI--SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASC 77 (162)
T ss_dssp CCCCGGGS-TTSSB--TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHH
T ss_pred CccccCCC-CCCCC--CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCcee
Confidence 37899964 35785 5899999999999999999965332446543 421 121 456665 2578
Q ss_pred ccCCCcc-ccccc
Q psy9822 246 QCDFGYV-GVNCS 257 (380)
Q Consensus 246 ~C~~G~~-G~~C~ 257 (380)
.|+.||. |..|+
T Consensus 78 ~C~~G~~~~~~C~ 90 (162)
T 1uzk_A 78 CCSLGKAWGTPCE 90 (162)
T ss_dssp HTTTCCEETTTTE
T ss_pred eCCCCCCcCCCcc
Confidence 8999987 55554
No 31
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.20 E-value=5.2e-07 Score=70.53 Aligned_cols=68 Identities=31% Similarity=0.744 Sum_probs=43.8
Q ss_pred CCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCC-CCCcccc--CC-CC--CcCCcccC---CCccccCCCccc
Q psy9822 184 PENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEE-GGECVPV--CS-QG--CVRGVCSE---PDKCQCDFGYVG 253 (380)
Q Consensus 184 d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~-~~~C~~~--C~-~~--C~~G~C~~---~~~C~C~~G~~G 253 (380)
|+|||....+.|. +++|++++++|+|.|++||++... ...|+++ |. .. |.+++|++ .++|.|++||++
T Consensus 2 dideC~~~~~~C~--~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~ 78 (86)
T 1lmj_A 2 DIDECRISPDLCG--RGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQL 78 (86)
T ss_dssp CCCTTTTCSSTTT--TSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCC
T ss_pred ccccccCCCCCCC--CCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCccc
Confidence 7899987767785 459999999999999999996421 1345544 42 11 33445544 235555555544
No 32
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.19 E-value=4.3e-09 Score=99.34 Aligned_cols=104 Identities=7% Similarity=-0.060 Sum_probs=58.9
Q ss_pred cCCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCC---CCCccccCCCCCcCCcccCCCccccCCCcccc
Q psy9822 178 NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEE---GGECVPVCSQGCVRGVCSEPDKCQCDFGYVGV 254 (380)
Q Consensus 178 ~~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~---~~~C~~~C~~~C~~G~C~~~~~C~C~~G~~G~ 254 (380)
++..+.+..++......|. +.|+|++...+|+|.|++||+|..+ .+.|+.. ..|....|.+.++| |.|.
T Consensus 23 ~~~g~~~~~n~~~~~~~c~-ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~--~~c~s~pC~nggtc-----~~G~ 94 (267)
T 4fbr_A 23 WLIGARDKQNVVALDIKSD-DGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQ--WGGTSAPWQPGGVW-----VLGA 94 (267)
T ss_dssp EECCCCSSCCEEEEEEECS-STTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEE--SSSTTSCEEEEEEE-----ECCC
T ss_pred eeeccccccccccCCCCcC-CCCeecCCCCCeEEeCCCCcccccccccccccccc--cCcCCCcccCCCee-----eccC
Confidence 3555655444433233566 8999999999999999999999874 1111111 01111222211111 2344
Q ss_pred cccc-----cCCCCCCCcccCCCCCcccccCCCCCCCCCCC
Q psy9822 255 NCSI-----QCQCNGHADCAGPDKLDVCLRCHNHTKGPQCD 290 (380)
Q Consensus 255 ~C~~-----~c~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~ 290 (380)
+|++ ..+|.+.++|++...++.| +|+.+|+|.+|+
T Consensus 95 ~c~~~~eC~s~pC~ngG~C~~~~~sy~C-~C~~Gf~G~~Ce 134 (267)
T 4fbr_A 95 RDKQNIVAVSIKSNDGGKTLTGTTTYNG-EGPIGFKSEVTD 134 (267)
T ss_dssp CSSCCEEEEEEECSSTTSEEEEEEEETT-SCCEEEEEEECC
T ss_pred ccccccccCCCCCCCCCEEecCCccEEe-eCCCCccccCCC
Confidence 4443 2346666666655556777 377777777665
No 33
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.18 E-value=1.2e-06 Score=75.45 Aligned_cols=39 Identities=21% Similarity=0.564 Sum_probs=28.8
Q ss_pred CCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 180 ~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
..|.|+|+|. .++|. ++++|++.+++|+|.|++||+|..
T Consensus 43 ~~c~dideC~--~~pC~-n~g~C~~~~~~y~C~C~~G~~G~~ 81 (146)
T 1x7a_L 43 KQYVDGDQCE--PNPCL-NGGLCKDDINSYECWCQVGFEGKN 81 (146)
T ss_dssp -------CCS--SCSSC-TTCEEEECSSCEEEECCSSEESTT
T ss_pred ccCCCcCcCC--CCCCC-CCCEeECCCCCEEEecCCCCcCCc
Confidence 4799999995 46898 789999999999999999999876
No 34
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.18 E-value=1.4e-06 Score=68.30 Aligned_cols=44 Identities=25% Similarity=0.666 Sum_probs=33.3
Q ss_pred CCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc
Q psy9822 184 PENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV 229 (380)
Q Consensus 184 d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~ 229 (380)
|+|||......| .+++|++++++|+|.|++||++......|+.+
T Consensus 2 dideC~~~~~~C--~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~di 45 (87)
T 1z6c_A 2 DVDECSLKPSIC--GTAVCKNIPGDFECECPEGYRYNLKSKSCEDI 45 (87)
T ss_dssp CSCSSSSSSSSB--TTSSCCCBTTBCCCSSSTTCEEETTTTEEECC
T ss_pred ccccccCCCCCC--CCCEeECCCCCEEEECCCCceECCCCCcCCCc
Confidence 688997665568 46899999999999999999965422345443
No 35
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.07 E-value=2e-06 Score=70.73 Aligned_cols=67 Identities=30% Similarity=0.651 Sum_probs=43.5
Q ss_pred CCCCccccCCC------CCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc-----CCC---CCcCCcccC---CCc
Q psy9822 182 CPPENECLNDH------HTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV-----CSQ---GCVRGVCSE---PDK 244 (380)
Q Consensus 182 C~d~deC~~g~------~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~-----C~~---~C~~G~C~~---~~~ 244 (380)
+.|+|||.... +.|. ++++|+++.++|+|.|++||+|.. |+.. |.. +|.+ +|++ .++
T Consensus 3 ~~d~d~C~~~p~~~~C~~~C~-~~g~C~~~~~~y~C~C~~G~~G~~----C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~ 76 (114)
T 1aut_L 3 HVDGDQCLVLPLEHPCASLCC-GHGTCIDGIGSFSCDCRSGWEGRF----CQREVSFLNCSLDNGGCTH-YCLEEVGWRR 76 (114)
T ss_dssp -----CCCCCSSCCSSSSTTT-TSEEECCCSSCCCEEECTTEESTT----SCEECCSSSSSSGGGGCSS-EEEECSSSEE
T ss_pred ceecccccCCCccccccccCC-CcCCCCCCCCCcEeeCCCCCcCCC----cCcCCcCCcCcCCCCCCCC-EeECCCCCEE
Confidence 45677776543 3476 789999999999999999999987 5432 321 1332 6665 357
Q ss_pred cccCCCcccc
Q psy9822 245 CQCDFGYVGV 254 (380)
Q Consensus 245 C~C~~G~~G~ 254 (380)
|.|+.||+|.
T Consensus 77 C~C~~G~~~~ 86 (114)
T 1aut_L 77 CSCAPGYKLG 86 (114)
T ss_dssp EECCTTEEEC
T ss_pred eECCCCeeEC
Confidence 8888888853
No 36
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.99 E-value=2.3e-06 Score=69.90 Aligned_cols=74 Identities=30% Similarity=0.706 Sum_probs=38.3
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc--CC--CCCcCCcccC---CCccc
Q psy9822 174 SFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS--QGCVRGVCSE---PDKCQ 246 (380)
Q Consensus 174 ~~~w~~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~--C~--~~C~~G~C~~---~~~C~ 246 (380)
..+|.+..| ++|||......|. .+|++++++|+|.|++||+|.. ...|+++ |. ..|. ++|++ .++|.
T Consensus 19 ~~~~~~~~C-d~neC~~~~~~C~---~~C~n~~g~y~C~C~~Gy~g~~-g~~C~dideC~~~~~C~-~~C~n~~gsy~C~ 92 (107)
T 2w2n_E 19 ENLYFQGAM-GTNECLDNNGGCS---YVCNDLKIGYECLCPDGFQLVA-QRRCEDIDECQDPDTCS-QLCVNLEGGYKCQ 92 (107)
T ss_dssp -CCCCSCCB-SCCGGGTGGGGCS---SEEECCSBSCEEECCTTCEEET-TTEEEC-------------------------
T ss_pred CCCcCCCCC-cCccCcCCCCCCC---CEeEeCCCCeEEECCCCccccC-CCccccccccCCCCCcC-CeeecCCCCEEEE
Confidence 456788889 8899976656675 4899999999999999999842 1346544 43 2233 34443 23555
Q ss_pred cCCCccc
Q psy9822 247 CDFGYVG 253 (380)
Q Consensus 247 C~~G~~G 253 (380)
|+.||++
T Consensus 93 C~~Gy~~ 99 (107)
T 2w2n_E 93 CEEGFQL 99 (107)
T ss_dssp -------
T ss_pred CCCCceE
Confidence 5555554
No 37
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.97 E-value=2.7e-06 Score=67.35 Aligned_cols=75 Identities=17% Similarity=0.450 Sum_probs=53.0
Q ss_pred CcccccCCCceecCCCCCcccc-C-CCCCcCCcccCCCccccCCCccccccc-c------cCCCCCCCcccCCC--CCcc
Q psy9822 208 GFECVCGRGYNKSEEGGECVPV-C-SQGCVRGVCSEPDKCQCDFGYVGVNCS-I------QCQCNGHADCAGPD--KLDV 276 (380)
Q Consensus 208 g~~C~C~~Gy~G~~~~~~C~~~-C-~~~C~~G~C~~~~~C~C~~G~~G~~C~-~------~c~C~~~~~C~~~~--~~g~ 276 (380)
+|+|.|.+||+|.. |+.. | ..+|.++ ...++|+|++||+ .|+ + ..+|.++++|++.. +.+.
T Consensus 1 sy~C~C~~g~~g~~----c~~~~c~~~pC~n~--~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~ 72 (91)
T 1tpg_A 1 SYQVICRDEKTQMI----YQQHQSWLRPVLRS--NRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFV 72 (91)
T ss_dssp CCCCCCBCSSSCCB----CCSSCEEEEECSSS--SCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEE
T ss_pred CeeeECCCCCcCCe----ECCCcccCCccccC--CCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeE
Confidence 58999999999875 4321 3 2223332 1245899999998 775 1 24687888898655 7889
Q ss_pred cccCCCCCCCCCCCC
Q psy9822 277 CLRCHNHTKGPQCDK 291 (380)
Q Consensus 277 C~~C~~~~~G~~C~~ 291 (380)
|. |+++|+|.+|+.
T Consensus 73 C~-C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 73 CQ-CPEGFAGKSCEI 86 (91)
T ss_dssp EE-CCTTCBSSSCCB
T ss_pred eE-CCCCCcCCcCCc
Confidence 95 999999998864
No 38
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=97.88 E-value=2.2e-07 Score=87.63 Aligned_cols=79 Identities=6% Similarity=-0.035 Sum_probs=57.3
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCC---CCCcccc-------C----------------
Q psy9822 177 WNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEE---GGECVPV-------C---------------- 230 (380)
Q Consensus 177 w~~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~---~~~C~~~-------C---------------- 230 (380)
+.+..|.+.+||.. .+|. +.++|++...+|+|.|++||+|..+ .+.|+.. |
T Consensus 91 ~~G~~c~~~~eC~s--~pC~-ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i 167 (267)
T 4fbr_A 91 VLGARDKQNIVAVS--IKSN-DGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNV 167 (267)
T ss_dssp ECCCCSSCCEEEEE--EECS-STTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCE
T ss_pred eccCccccccccCC--CCCC-CCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceeccccccccc
Confidence 35678888889953 4787 8999999999999999999999876 1111110 1
Q ss_pred ---CCCCc-CCcccC---CCccccCCCcccccccc
Q psy9822 231 ---SQGCV-RGVCSE---PDKCQCDFGYVGVNCSI 258 (380)
Q Consensus 231 ---~~~C~-~G~C~~---~~~C~C~~G~~G~~C~~ 258 (380)
...|. .|+|++ .++|+|++||+|..|+.
T Consensus 168 ~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~ 202 (267)
T 4fbr_A 168 INVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSP 202 (267)
T ss_dssp EEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEET
T ss_pred ccCCCCCCCCCEeeCCCCCeEEeCCCCcccccccc
Confidence 12243 467765 46899999999988864
No 39
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.87 E-value=1.8e-05 Score=83.11 Aligned_cols=82 Identities=28% Similarity=0.724 Sum_probs=64.1
Q ss_pred CCccC--CCCCCCccccCCCCCCCCCCC---eeecCCCCcccc-cCCCceecCC-----------CCCcccc--CC---C
Q psy9822 175 FSWNY--VKCPPENECLNDHHTCDPQSE---QCVDLADGFECV-CGRGYNKSEE-----------GGECVPV--CS---Q 232 (380)
Q Consensus 175 ~~w~~--~~C~d~deC~~g~~~C~~~~g---~C~n~~~g~~C~-C~~Gy~G~~~-----------~~~C~~~--C~---~ 232 (380)
.+|.+ ..|.+++||....+.|. +++ +|+++.++|+|. |++||+|..+ ...|+.+ |. .
T Consensus 32 ~GytGdg~~CeDiDEC~~~p~~C~-~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~ 110 (634)
T 1yo8_A 32 VGFLGNGTHCEDLDECALVPDICF-STSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTH 110 (634)
T ss_dssp TTBCSCSSSCCBCCTTTTSCCCSC-CCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCC
T ss_pred CccCCCCCCccccccccCCCCccc-CCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCc
Confidence 45655 78999999977666798 666 899999999998 9999999863 1236655 74 3
Q ss_pred CCc-CCcccC-C------CccccCCCccc--cccc
Q psy9822 233 GCV-RGVCSE-P------DKCQCDFGYVG--VNCS 257 (380)
Q Consensus 233 ~C~-~G~C~~-~------~~C~C~~G~~G--~~C~ 257 (380)
.|. +++|+. + ++|.|+.||+| ..|+
T Consensus 111 pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 111 NCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG 145 (634)
T ss_dssp CCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred ccccCccccccccccccceeeeccCCccccCcccc
Confidence 587 578875 3 48999999998 7786
No 40
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=97.87 E-value=1.3e-05 Score=79.80 Aligned_cols=44 Identities=39% Similarity=0.921 Sum_probs=36.1
Q ss_pred cCCCCCCCc-ccC----------------CCCCcccccCCCCCCCCCCCCCCCCccCCCCC
Q psy9822 259 QCQCNGHAD-CAG----------------PDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRD 302 (380)
Q Consensus 259 ~c~C~~~~~-C~~----------------~~~~g~C~~C~~~~~G~~C~~C~~g~~G~~~~ 302 (380)
+|+|++|+. |.. ..+.++|+.|+++++|.+|++|++||||++..
T Consensus 324 pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~~GYyg~p~~ 384 (403)
T 2y38_A 324 SCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQ 384 (403)
T ss_dssp CCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSCEECTTCEECTTS
T ss_pred ccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCcCcCCCCCcCCCCccCCCCC
Confidence 478888875 731 13579997799999999999999999999865
No 41
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=97.82 E-value=1.4e-05 Score=78.99 Aligned_cols=92 Identities=22% Similarity=0.598 Sum_probs=55.9
Q ss_pred CCCCcccccCCCceecCCCCCccccCC-CCCcCCcccCCCccccCCCcccccccccCCCCCCCc-ccC-------CCCCc
Q psy9822 205 LADGFECVCGRGYNKSEEGGECVPVCS-QGCVRGVCSEPDKCQCDFGYVGVNCSIQCQCNGHAD-CAG-------PDKLD 275 (380)
Q Consensus 205 ~~~g~~C~C~~Gy~G~~~~~~C~~~C~-~~C~~G~C~~~~~C~C~~G~~G~~C~~~c~C~~~~~-C~~-------~~~~g 275 (380)
...++.|.|+.||.|..+ ..|.+-.. ..+..+.+..+. .|. +|.|+++++ |.. ....|
T Consensus 268 ~~~~~~C~C~~nt~G~~C-e~C~~gy~~~p~~~g~~~~~~-----------~C~-~C~Cn~~g~~C~~d~~~~~c~~~~G 334 (375)
T 4aqt_A 268 EFDKLMCNCKHNTYGVDC-EKCLPFFNDRPWRRATAESAS-----------ECL-PCDCNGRSQECYFDPELYRSTGHGG 334 (375)
T ss_dssp TTSCEEECCCTTEESTTS-CEECTTCCSSCCCCCCSSCCC-----------CCC-CCCGGGSCSCEEECHHHHHHSSCCE
T ss_pred CCCCeeeeCcCCCcCCCc-ccCCCCCcCCCCCCCccCCCC-----------CCC-CCcCcCCCCCcccccccCccCCCCC
Confidence 445677889999988773 22222111 112223332221 222 355665553 310 23578
Q ss_pred ccccCCCCCCCCCCCCCCCCccCCCCCCCCCcCCC
Q psy9822 276 VCLRCHNHTKGPQCDKCEPLYVGDPRDNGECVPCS 310 (380)
Q Consensus 276 ~C~~C~~~~~G~~C~~C~~g~~G~~~~~~~C~~C~ 310 (380)
+|..|++||+|.+|++|++||||++.. ..|++|.
T Consensus 335 ~C~~C~~n~~G~~Ce~C~~Gyyg~~~~-~~C~pCa 368 (375)
T 4aqt_A 335 HCTNCRDNTDGAKCERCRENFFRLGNT-EACSPAA 368 (375)
T ss_dssp EECSCTTTEESTTSCEECSSEECCTTC-SSCEEC-
T ss_pred CCCCCCCCCcCCCCCCCCcCcccCcCC-CCCcCCc
Confidence 997799999999999999999998743 4688876
No 42
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.73 E-value=1.3e-05 Score=63.32 Aligned_cols=69 Identities=26% Similarity=0.579 Sum_probs=51.5
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcc--cc--CC-CCCcC-CcccC-----C
Q psy9822 174 SFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV--PV--CS-QGCVR-GVCSE-----P 242 (380)
Q Consensus 174 ~~~w~~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~--~~--C~-~~C~~-G~C~~-----~ 242 (380)
..+|.+..| ++++|. ...|++..++|+|.|++||. . |+ .+ |. ++|.+ |+|+. .
T Consensus 7 ~~g~~g~~c-~~~~c~---------~~pC~n~~~~y~C~C~~G~~--~----C~~~~~~~C~~~pC~ngg~C~~~~~~~~ 70 (91)
T 1tpg_A 7 RDEKTQMIY-QQHQSW---------LRPVLRSNRVEYCWCNSGRA--Q----CHSVPVKSCSEPRCFNGGTCQQALYFSD 70 (91)
T ss_dssp BCSSSCCBC-CSSCEE---------EEECSSSSCEEEEECSSSCC--B----CCEECEEECSSCCSCTTCEEEEESSSSC
T ss_pred CCCCcCCeE-CCCccc---------CCccccCCCCcEeECCCCCc--c----cccCcCCcccCCCCCCCCEeecCCCCCC
Confidence 345777777 577883 23477888999999999996 2 65 23 64 45874 78984 3
Q ss_pred CccccCCCcccccccc
Q psy9822 243 DKCQCDFGYVGVNCSI 258 (380)
Q Consensus 243 ~~C~C~~G~~G~~C~~ 258 (380)
++|.|++||+|..|++
T Consensus 71 ~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 71 FVCQCPEGFAGKSCEI 86 (91)
T ss_dssp EEEECCTTCBSSSCCB
T ss_pred eEeECCCCCcCCcCCc
Confidence 5899999999999874
No 43
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.72 E-value=5.5e-06 Score=84.28 Aligned_cols=75 Identities=29% Similarity=0.757 Sum_probs=38.2
Q ss_pred cccccCCCceecCCCCCcccc-CCCCCcCCcccCCCccccCCCcccccccc-cC--CCCCCCcccCCCCCcccccCCCCC
Q psy9822 209 FECVCGRGYNKSEEGGECVPV-CSQGCVRGVCSEPDKCQCDFGYVGVNCSI-QC--QCNGHADCAGPDKLDVCLRCHNHT 284 (380)
Q Consensus 209 ~~C~C~~Gy~G~~~~~~C~~~-C~~~C~~G~C~~~~~C~C~~G~~G~~C~~-~c--~C~~~~~C~~~~~~g~C~~C~~~~ 284 (380)
....|..+|.|.. |+.. |...|.||+|+.+++|.|.+||+|..|++ .| +|.++++|.. .+.|. |.++|
T Consensus 377 ~p~~C~~~~~g~~----c~~~~C~~~C~nG~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~---~~~C~-C~~G~ 448 (463)
T 2wg3_C 377 MPEECRATVQPAQ----TLTSECSRLCRNGYCTPTGKCCCSPGWEGDFCRTAKCEPACRHGGVCVR---PNKCL-CKKGY 448 (463)
T ss_dssp SCGGGCCCCCCCC----CCCCHHHHHCCSEEECTTSCEEECTTEESTTSCEECC--------------------------
T ss_pred ccccCCCCCcCCC----CccccccCCCCCCccCCCCeECCCCCcCCCcCCcCcCCCCCCCCCEECC---CCEEE-CCCCc
Confidence 3468888998876 5444 76668889999888999999999999975 23 5778888875 47894 99999
Q ss_pred CCCCCCC
Q psy9822 285 KGPQCDK 291 (380)
Q Consensus 285 ~G~~C~~ 291 (380)
+|..|+.
T Consensus 449 ~G~~C~~ 455 (463)
T 2wg3_C 449 LGPQCEQ 455 (463)
T ss_dssp -------
T ss_pred ccCCCCC
Confidence 9998863
No 44
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.70 E-value=4.3e-06 Score=75.51 Aligned_cols=70 Identities=29% Similarity=0.745 Sum_probs=16.0
Q ss_pred CCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCccc---c-CCC---CCcCCcccC---CCccccCC
Q psy9822 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVP---V-CSQ---GCVRGVCSE---PDKCQCDF 249 (380)
Q Consensus 180 ~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~---~-C~~---~C~~G~C~~---~~~C~C~~ 249 (380)
..|.++|+|. .++|. ++|+|++..++|+|.|++||+|.. |+. . |.. .|.+ +|++ .++|.|+.
T Consensus 37 ~~c~dideC~--~~pC~-ngg~C~n~~g~y~C~C~~Gf~G~~----Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~ 108 (195)
T 1nfu_B 37 NKYKDGDQCE--TSPCQ-NQGKCKDGLGEYTCTCLEGFEGKN----CELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCAR 108 (195)
T ss_dssp ---------------------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCT
T ss_pred ccCCCCcccC--CCCCC-CCCEeECCCCCeeEeCCCCceecc----ccccccccccCCCCCCCC-EeECCCCCeEEECCC
Confidence 4699999996 46898 789999999999999999999877 543 1 432 2444 6655 34778888
Q ss_pred Ccc----ccccc
Q psy9822 250 GYV----GVNCS 257 (380)
Q Consensus 250 G~~----G~~C~ 257 (380)
||+ |..|.
T Consensus 109 Gy~l~~dG~~C~ 120 (195)
T 1nfu_B 109 GYTLADNGKACI 120 (195)
T ss_dssp TEEECTTSSCEE
T ss_pred CceeCCCCCccc
Confidence 887 66655
No 45
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.67 E-value=1.2e-05 Score=68.60 Aligned_cols=38 Identities=16% Similarity=0.567 Sum_probs=33.6
Q ss_pred CCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 181 ~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
.|.++|+|. .++|. ++++|+++.++|+|.|++||+|..
T Consensus 43 ~c~did~C~--~~pC~-n~g~C~~~~g~y~C~C~~G~~G~~ 80 (142)
T 2c4f_L 43 SYSDGDQCA--SSPCQ-NGGSCKDQLQSYICFCLPAFEGRN 80 (142)
T ss_dssp HHTTCCGGG--GCCCC-TTCEEEEETTEEEEECCTTEESTT
T ss_pred cCCccCcCc--CCCcC-CCCEEeCCCCCEEeeCCCCccCCc
Confidence 578999996 46898 789999999999999999999876
No 46
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.65 E-value=5.3e-06 Score=70.23 Aligned_cols=39 Identities=21% Similarity=0.593 Sum_probs=0.0
Q ss_pred CCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 180 ~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
..|.++|+|. .++|. ++++|++..++|+|.|++||+|..
T Consensus 37 ~~c~d~d~C~--~~pC~-n~g~C~~~~~~y~C~C~~G~~G~~ 75 (134)
T 2vh0_B 37 NKYKDGDQCE--TSPCQ-NQGKCKDGLGEYTCTCLEGFEGKN 75 (134)
T ss_dssp ------------------------------------------
T ss_pred ccCCCcCcCC--CCCCC-CcCCcccCCCCEEeeCCCCccCCc
Confidence 4699999995 35797 789999999999999999999876
No 47
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.63 E-value=3.4e-05 Score=70.78 Aligned_cols=86 Identities=27% Similarity=0.569 Sum_probs=61.5
Q ss_pred CCCCCCCeeecCCCCcccccCCCceecCCC---C---------Ccccc-CCCCCc-CCcccCCCccccCCC------ccc
Q psy9822 194 TCDPQSEQCVDLADGFECVCGRGYNKSEEG---G---------ECVPV-CSQGCV-RGVCSEPDKCQCDFG------YVG 253 (380)
Q Consensus 194 ~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~---~---------~C~~~-C~~~C~-~G~C~~~~~C~C~~G------~~G 253 (380)
.|. .+|+|++ ..|.|.+||+|..+. . .|... ....|. +|+|+. ++|.|+.| |+|
T Consensus 97 ~Cs-g~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-g~C~C~~gw~~~~~~~G 170 (217)
T 2p28_B 97 LCH-GKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYG 170 (217)
T ss_dssp TTT-TSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-TEEEECCCCSTTCCEES
T ss_pred ccC-CCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-CceECCCCCCCcccEEC
Confidence 566 6788885 589999999999851 0 12211 123476 688884 68999999 699
Q ss_pred ccccc---cC------CCCCC--CcccCCCCCcccccCCCCCCCCCCC
Q psy9822 254 VNCSI---QC------QCNGH--ADCAGPDKLDVCLRCHNHTKGPQCD 290 (380)
Q Consensus 254 ~~C~~---~c------~C~~~--~~C~~~~~~g~C~~C~~~~~G~~C~ 290 (380)
..|+. .| .|.+| ++|. .+.|. |.++|+|..|+
T Consensus 171 ~~Ce~~~~~C~~~~g~~C~~~~~G~C~----~g~C~-C~~G~~G~~C~ 213 (217)
T 2p28_B 171 QYCECDTINCERYNGQVCGGPGRGLCF----CGKCR-CHPGFEGSACQ 213 (217)
T ss_dssp TTSCEESSCSCEETTEETTCTTTEEEE----TTEEE-ECTTEESTTSC
T ss_pred CCcccCCccCCCCCCCCCCCCCCcEEe----CCeeE-CCCCCccCCcC
Confidence 99973 23 37777 7887 36884 99999998885
No 48
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.53 E-value=1.8e-05 Score=72.53 Aligned_cols=51 Identities=41% Similarity=1.023 Sum_probs=35.9
Q ss_pred Cc-CCcccCCCccccCCCccccccccc-------------------CCCCCCCcccCCCCCcccccCCCC------CCCC
Q psy9822 234 CV-RGVCSEPDKCQCDFGYVGVNCSIQ-------------------CQCNGHADCAGPDKLDVCLRCHNH------TKGP 287 (380)
Q Consensus 234 C~-~G~C~~~~~C~C~~G~~G~~C~~~-------------------c~C~~~~~C~~~~~~g~C~~C~~~------~~G~ 287 (380)
|. +|+|+. ++|+|++||+|..|+.+ ..|.++++|. .+.|. |.++ |+|.
T Consensus 98 Csg~G~C~~-g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~----~g~C~-C~~gw~~~~~~~G~ 171 (217)
T 2p28_B 98 CHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV----CGQCL-CHTSDVPGKLIYGQ 171 (217)
T ss_dssp TTTSEEEET-TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEE----TTEEE-ECCCCSTTCCEEST
T ss_pred cCCCceEEC-CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEe----CCceE-CCCCCCCcccEECC
Confidence 54 688875 79999999999998732 1255556665 35774 8888 4777
Q ss_pred CCC
Q psy9822 288 QCD 290 (380)
Q Consensus 288 ~C~ 290 (380)
.|+
T Consensus 172 ~Ce 174 (217)
T 2p28_B 172 YCE 174 (217)
T ss_dssp TSC
T ss_pred Ccc
Confidence 775
No 49
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.39 E-value=0.00011 Score=56.62 Aligned_cols=44 Identities=27% Similarity=0.773 Sum_probs=36.5
Q ss_pred CCcc--CCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 175 FSWN--YVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 175 ~~w~--~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
.+|. +..|.++|||.. .++|. +++|+|++++|+|.|++||+|+.
T Consensus 32 ~Gy~~~g~~C~dideC~~-~~~C~--~~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 32 FGYILAGNECVDTDECSV-GNPCG--NGTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp TTEEEETTEEEECCGGGT-CCTTS--SSCEEECSSSEEECCSSSSCCCS
T ss_pred CCeECCCCccCCcccccC-CCCCC--CCEeECCCCCEEeECCCCeEeCC
Confidence 4564 778999999964 45786 36999999999999999999876
No 50
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.24 E-value=0.00019 Score=68.67 Aligned_cols=63 Identities=30% Similarity=0.792 Sum_probs=48.7
Q ss_pred CCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcc-cc--CC----CCCcCCcccC---CCccccCCCccc
Q psy9822 184 PENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV-PV--CS----QGCVRGVCSE---PDKCQCDFGYVG 253 (380)
Q Consensus 184 d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~-~~--C~----~~C~~G~C~~---~~~C~C~~G~~G 253 (380)
|+|+|. ..+|. ++++|++..++|+|.|++||.|.. |+ .+ |. ..|.+ .|++ .++|.|+.||+|
T Consensus 4 d~~~C~--~~pC~-~~g~C~~~~~~~~C~C~~g~~g~~----C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~ 75 (317)
T 3h5c_B 4 GGSPCI--SQPCL-HNGSCQDSIWGYTCTCSPGYEGSN----CELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRL 75 (317)
T ss_dssp --CCTT--SCCCT-TTCCCCCCSSSCCCCCSSSCCSSS----SCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEEC
T ss_pred cCCcCC--CCCCC-CCCEeECCCCCeEEECCCCCcCCc----cccCcccCCCCCCCCCcC-ccccCCCeeEEeccccccc
Confidence 567784 35687 789999999999999999999976 65 33 64 35777 8876 469999999997
Q ss_pred c
Q psy9822 254 V 254 (380)
Q Consensus 254 ~ 254 (380)
.
T Consensus 76 ~ 76 (317)
T 3h5c_B 76 G 76 (317)
T ss_dssp C
T ss_pred c
Confidence 4
No 51
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.16 E-value=8.6e-05 Score=75.43 Aligned_cols=74 Identities=28% Similarity=0.722 Sum_probs=32.8
Q ss_pred CCCCCccCCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCccc-cCCCCCc-CCcccCCCccccCC
Q psy9822 172 NDSFSWNYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVP-VCSQGCV-RGVCSEPDKCQCDF 249 (380)
Q Consensus 172 ~~~~~w~~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~-~C~~~C~-~G~C~~~~~C~C~~ 249 (380)
.+...|.+..|. +++|.. .|. + |+|++. ++|.|.+||+|.. |+. .|...|. +|+|+.+++|.|+.
T Consensus 380 ~C~~~~~g~~c~-~~~C~~---~C~-n-G~C~~~---~~C~C~~G~~G~~----C~~~~C~~~C~~~g~C~~~~~C~C~~ 446 (463)
T 2wg3_C 380 ECRATVQPAQTL-TSECSR---LCR-N-GYCTPT---GKCCCSPGWEGDF----CRTAKCEPACRHGGVCVRPNKCLCKK 446 (463)
T ss_dssp GGCCCCCCCCCC-CCHHHH---HCC-S-EEECTT---SCEEECTTEESTT----SCEECC--------------------
T ss_pred cCCCCCcCCCCc-cccccC---CCC-C-CccCCC---CeECCCCCcCCCc----CCcCcCCCCCCCCCEECCCCEEECCC
Confidence 345678888885 457743 476 3 889863 4899999999987 653 3877888 48999989999999
Q ss_pred Ccccccccc
Q psy9822 250 GYVGVNCSI 258 (380)
Q Consensus 250 G~~G~~C~~ 258 (380)
||+|..|++
T Consensus 447 G~~G~~C~~ 455 (463)
T 2wg3_C 447 GYLGPQCEQ 455 (463)
T ss_dssp ---------
T ss_pred CcccCCCCC
Confidence 999999986
No 52
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.12 E-value=0.00011 Score=57.10 Aligned_cols=41 Identities=24% Similarity=0.570 Sum_probs=35.3
Q ss_pred CCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 179 YVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 179 ~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
+..|.|+|||......|. +++|+|++++|+|.|++||++..
T Consensus 40 g~~C~dideC~~~~~~C~--~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 40 MKNCMDIDECQRDPLLCR--GGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp SSSEEECCHHHHCSSTTT--TSEEEEETTEEEEESCTTSCCCS
T ss_pred CCccCCcccccCCCCcCC--CCEeEcCCCCEEEECcCCcccCC
Confidence 577999999976655675 57999999999999999999875
No 53
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.07 E-value=0.00029 Score=46.32 Aligned_cols=35 Identities=23% Similarity=0.660 Sum_probs=29.5
Q ss_pred CCccccCCCCCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 184 PENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 184 d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
|+|+|. ..+|. ++++|++..++|+|.|++||+|..
T Consensus 2 d~d~C~--~~pC~-ngg~C~~~~~~~~C~C~~G~~G~~ 36 (39)
T 1edm_B 2 DGDQCE--SNPCL-NGGSCKDDINSYECWCPFGFEGKN 36 (39)
T ss_dssp CCCTTT--TCCCC-TTCEEEEETTEEEEECCTTCCSTT
T ss_pred ccccCC--CCCCC-CCCEeEcCCCceEeECCCCCcCCc
Confidence 567884 35787 789999999999999999999875
No 54
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.87 E-value=0.00066 Score=51.05 Aligned_cols=63 Identities=21% Similarity=0.377 Sum_probs=42.5
Q ss_pred CCCccccCCCCCCCCCCCeeecCCCCcccc-cCCCceecCCCCCccccCCCCCcCCcccCCCccccCCCcccc
Q psy9822 183 PPENECLNDHHTCDPQSEQCVDLADGFECV-CGRGYNKSEEGGECVPVCSQGCVRGVCSEPDKCQCDFGYVGV 254 (380)
Q Consensus 183 ~d~deC~~g~~~C~~~~g~C~n~~~g~~C~-C~~Gy~G~~~~~~C~~~C~~~C~~G~C~~~~~C~C~~G~~G~ 254 (380)
.|+|||....+.|. ..++|+|++++|+|. +..||.++.....+.+. +.++. ..+.|++||.+.
T Consensus 1 ~DidEC~~~~~~C~-~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~~~~----~~~~~----~~~~C~~Gy~~~ 64 (71)
T 2kl7_A 1 SDVNECLTIPEACK-GEMKCINHYGGYLCLPRSAAVINDLHGEGPPPP----VPPAQ----HPNPCPPGYEPD 64 (71)
T ss_dssp CCSCCTTCCCCSCT-TEEEEEETTCCEEEEETTSCCCSCCSCSSCCCS----SCSCS----SCCCSCTTEEEE
T ss_pred CccccccCCCCCCC-CCCEeECCCCCeEecccCCcccccccCCccccc----cccCc----cccCCCCCeeeC
Confidence 37899987778897 678999999999994 67789876532222111 11111 145799999753
No 55
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.83 E-value=0.00024 Score=60.56 Aligned_cols=47 Identities=21% Similarity=0.511 Sum_probs=39.4
Q ss_pred CCCc---cCCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCC
Q psy9822 174 SFSW---NYVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEE 222 (380)
Q Consensus 174 ~~~w---~~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~ 222 (380)
..+| .+..|.|+|||....+.|. + ++|+|++++|+|.|++||+++..
T Consensus 93 ~~Gy~~~~g~~C~dideC~~~~~~C~-~-g~C~n~~g~y~C~C~~Gy~g~~~ 142 (147)
T 2w86_A 93 GKGYSRIKGTQCEDIDECEVFPGVCK-N-GLCVNTRGSFKCQCPSGMTLDAT 142 (147)
T ss_dssp CTTEEEEETTEEEECCHHHHSTTCSS-S-SEEEEETTEEEEECCTTCCBCTT
T ss_pred CCccccCCCCccCccccccCCCCCCC-C-CEEECCCCCEEeeCCCCCccCCC
Confidence 4566 4788999999976667797 3 69999999999999999998863
No 56
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=96.82 E-value=0.00052 Score=49.10 Aligned_cols=38 Identities=13% Similarity=0.329 Sum_probs=28.8
Q ss_pred CC-CCCccccCCCCCCCCCCCee-----ecCCCCcccccCCCceecC
Q psy9822 181 KC-PPENECLNDHHTCDPQSEQC-----VDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 181 ~C-~d~deC~~g~~~C~~~~g~C-----~n~~~g~~C~C~~Gy~G~~ 221 (380)
.| .++|||. ..+|. ++|+| ++..++|+|.|++||+|..
T Consensus 3 ~c~~~~~eC~--s~pC~-NgGtC~~~~~~d~~~~y~C~C~~g~~G~~ 46 (55)
T 3u7u_G 3 SHLVKCAEKE--KTFCV-NGGECFMVKDLSNPSRYLCKCPNEFTGDR 46 (55)
T ss_dssp CCEEECCSTT--TTTSC-TTCEEEEECCC--CCCEEEEECTTEESTT
T ss_pred CCcccCCCCc--CCCCC-CCCCcCCCCccCCCCCEeEeCCCCCcCCC
Confidence 44 3678884 45898 89999 4667899999999999976
No 57
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.78 E-value=0.00028 Score=69.39 Aligned_cols=70 Identities=30% Similarity=0.843 Sum_probs=16.4
Q ss_pred CCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc--CC--CCCcCCcccC---CCccccCCCcc----
Q psy9822 184 PENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS--QGCVRGVCSE---PDKCQCDFGYV---- 252 (380)
Q Consensus 184 d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~--C~--~~C~~G~C~~---~~~C~C~~G~~---- 252 (380)
|+|||......|. .+|.+..++|+|.|++||+.......|+++ |. ..|.++ |++ .++|.|++||+
T Consensus 2 ~~~~C~~~~~~c~---~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~-C~~~~g~~~C~C~~g~~l~~d 77 (386)
T 3v65_B 2 GEENCNVNNGGCA---QKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG-CTNSEGAFQCWCEAGYELRPD 77 (386)
T ss_dssp -----------------------------------------------------CCTTE-EC-----CCEECCTTEEECTT
T ss_pred CcCcccCCCCCCC---CCCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccCc-CCCCCCCCeEEECCCceEcCC
Confidence 5788976555676 379999999999999999833222347665 63 346654 776 46999999998
Q ss_pred ccccc
Q psy9822 253 GVNCS 257 (380)
Q Consensus 253 G~~C~ 257 (380)
|..|.
T Consensus 78 ~~~C~ 82 (386)
T 3v65_B 78 RRSCK 82 (386)
T ss_dssp SSCEE
T ss_pred CCeEC
Confidence 56665
No 58
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.76 E-value=0.00087 Score=46.83 Aligned_cols=37 Identities=27% Similarity=0.741 Sum_probs=29.4
Q ss_pred CCCccccCC--------CCCCCCCCCeeecCCCCcccccCCCceecCC
Q psy9822 183 PPENECLND--------HHTCDPQSEQCVDLADGFECVCGRGYNKSEE 222 (380)
Q Consensus 183 ~d~deC~~g--------~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~ 222 (380)
.|+|||... ...|. ++|+|++++|+|.|++||.+...
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~---~~C~n~~Gsy~C~C~~Gy~~~~d 46 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ---HLCHNYVGGYFCSCRPGYELQED 46 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS---SEEEEETTEEEEECSTTCEECTT
T ss_pred CccccccCcccccccccCCCCC---CEeECCCCCeEEECCCCCeECCC
Confidence 367888653 35675 48999999999999999998653
No 59
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.73 E-value=0.0017 Score=52.99 Aligned_cols=53 Identities=25% Similarity=0.581 Sum_probs=38.4
Q ss_pred CCCccCCCCCCC---ccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc
Q psy9822 174 SFSWNYVKCPPE---NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV 229 (380)
Q Consensus 174 ~~~w~~~~C~d~---deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~ 229 (380)
..+|.+..|.++ +||......|. .+|+++.++|+|.|++||++......|++.
T Consensus 40 ~~G~~G~~C~~~~~~~~C~~~~~~C~---~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~ 95 (114)
T 1aut_L 40 RSGWEGRFCQREVSFLNCSLDNGGCT---HYCLEEVGWRRCSCAPGYKLGDDLLQCHPA 95 (114)
T ss_dssp CTTEESTTSCEECCSSSSSSGGGGCS---SEEEECSSSEEEECCTTEEECTTSSCEEEC
T ss_pred CCCCcCCCcCcCCcCCcCcCCCCCCC---CEeECCCCCEEeECCCCeeECCCCCccCcC
Confidence 356888889764 46865444565 289999999999999999987643445543
No 60
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.65 E-value=0.00029 Score=66.90 Aligned_cols=44 Identities=32% Similarity=0.767 Sum_probs=35.1
Q ss_pred CCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc
Q psy9822 183 PPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV 229 (380)
Q Consensus 183 ~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~ 229 (380)
.|+|||..+.+.|+ .++.|+|++++|+|.|++||+|++ ..|.++
T Consensus 3 ~DiDEC~~~~~~C~-~~a~C~Nt~Gsy~C~C~~Gy~GnG--~~C~d~ 46 (285)
T 1gl4_A 3 LAQQTCANNRHQCS-VHAECRDYATGFCCRCVANYTGNG--RQCVAE 46 (285)
T ss_dssp ----CHHHHGGGSC-TTEEEEECSSCEEEEECTTEEECS--SSEEET
T ss_pred ccchhccCCCCCCC-CCCEeEcCCCCeEEEcCCCCCCCC--CcCCCC
Confidence 37899987788999 678999999999999999999987 456654
No 61
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.59 E-value=0.0014 Score=64.78 Aligned_cols=64 Identities=34% Similarity=0.893 Sum_probs=43.4
Q ss_pred ccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc--CC--CCCcCCcccC---CCccccCCCcccc
Q psy9822 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS--QGCVRGVCSE---PDKCQCDFGYVGV 254 (380)
Q Consensus 186 deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~--C~--~~C~~G~C~~---~~~C~C~~G~~G~ 254 (380)
|||......|. +.|+|++++|+|.|++||.+.. ...|+.+ |. ..|.+ .|++ .+.|.|..||++.
T Consensus 1 ~eC~~~~~~c~---~~C~~~~~~y~C~C~~G~~~~~-~~~C~dideC~~~~~C~~-~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 1 NECLDNNGGCS---HVCNDLKIGYECLCPDGFQLVA-QRRCEDIDECQDPDTCSQ-LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp CCTTTTGGGCS---SEEEECSSSEEEECCTTEEECS-SSCEEECCCCSTTSSCSS-CCBCCSSSCBCCCCTTCCCC
T ss_pred CcccCCCCCCC---CEeECCCCCeEEECCCCCCcCC-CCcccCchhhhccCCCCC-ccCCCccceeeecccccccc
Confidence 46754433443 5899999999999999999521 2346655 64 33544 6665 4588888888764
No 62
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.50 E-value=0.00079 Score=49.21 Aligned_cols=37 Identities=22% Similarity=0.711 Sum_probs=31.8
Q ss_pred CCCCccccCCCCCCCCCC--CeeecCCCCcccccCCCce-ecC
Q psy9822 182 CPPENECLNDHHTCDPQS--EQCVDLADGFECVCGRGYN-KSE 221 (380)
Q Consensus 182 C~d~deC~~g~~~C~~~~--g~C~n~~~g~~C~C~~Gy~-G~~ 221 (380)
+.++|+|. .++|. ++ |+|+++.++|+|.|++||+ |..
T Consensus 8 ~~~~d~C~--snPC~-nga~gtC~~~~g~y~C~C~~Gy~~G~~ 47 (61)
T 2k2s_B 8 SETPAACS--SNPCG-PEAAGTCKETNSGYICRCNQGYRISLD 47 (61)
T ss_dssp TTSCCHHH--HCSSC-SSSCCEEEECSSEEEEECCTTEEEEEC
T ss_pred cCCCCcCc--CCCCc-CCCccccccCCCceEeECCCCCccCCC
Confidence 67888995 35787 66 7999999999999999999 876
No 63
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.47 E-value=0.0014 Score=50.83 Aligned_cols=36 Identities=28% Similarity=0.891 Sum_probs=28.6
Q ss_pred CCCCCCCccccCCCCCCCCCCCeeecCCCCcccccC--CCcee
Q psy9822 179 YVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCG--RGYNK 219 (380)
Q Consensus 179 ~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~--~Gy~G 219 (380)
+..|.++|||.. ++|. ++|+|++++|+|.|+ +||..
T Consensus 39 g~~C~dideC~~--~~C~---~~C~n~~g~y~C~C~g~~G~~~ 76 (87)
T 1z6c_A 39 SKSCEDIDECSE--NMCA---QLCVNYPGGYTCYCDGKKGFKL 76 (87)
T ss_dssp TTEEECCCHHHH--SCCS---SEECCCSSSCCEECCSSSCCBC
T ss_pred CCcCCCcCeeCC--CCCC---CEEEccCCCEEEECCCCcCCcc
Confidence 567999999953 5675 689999999999995 55543
No 64
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.38 E-value=0.00067 Score=58.66 Aligned_cols=40 Identities=25% Similarity=0.610 Sum_probs=34.5
Q ss_pred CCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCC
Q psy9822 181 KCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEE 222 (380)
Q Consensus 181 ~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~ 222 (380)
.|.|+|||....+.|. + ++|+|++++|+|.|++||+|+..
T Consensus 118 ~c~dideC~~~~~~C~-~-g~C~n~~gsy~C~C~~Gy~g~~d 157 (162)
T 1uzk_A 118 ILEDIDECQELPGLCQ-G-GKCINTFGSFQCRCPTGYYLNED 157 (162)
T ss_dssp CEEECCHHHHCGGGGB-T-SEEEECSSCEEEECCTTCCBCTT
T ss_pred ccCccccccCCCCCcC-C-CEeEcCCCCEEeeCCCCccCCCC
Confidence 5789999976666797 3 79999999999999999999763
No 65
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=96.37 E-value=0.0018 Score=45.68 Aligned_cols=37 Identities=22% Similarity=0.566 Sum_probs=28.6
Q ss_pred CCccccCC-CCCCCCCCCeee--cCCCCcccccCCCceecC
Q psy9822 184 PENECLND-HHTCDPQSEQCV--DLADGFECVCGRGYNKSE 221 (380)
Q Consensus 184 d~deC~~g-~~~C~~~~g~C~--n~~~g~~C~C~~Gy~G~~ 221 (380)
++++|... ..+|. ++|+|+ +..++|+|.|++||+|..
T Consensus 2 ~i~~C~~~~~~pC~-ngg~C~~~~~~~~~~C~C~~G~~G~~ 41 (53)
T 1egf_A 2 SYPGCPSSYDGYCL-NGGVCMHIESLDSYTCNCVIGYSGDR 41 (53)
T ss_dssp EECCCCTTSSCSSC-SSCEEEEESSSSCEEEECCTTCCSSS
T ss_pred CcccCCCCCCCcCC-CCcEEEeeCCCCCEEEECCCCCcCCc
Confidence 45677532 23787 789999 888999999999999876
No 66
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=96.29 E-value=0.002 Score=55.04 Aligned_cols=53 Identities=19% Similarity=0.537 Sum_probs=40.7
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCCCee-ecCCCCcccccCCCceecCCCCCcccc
Q psy9822 174 SFSWNYVKCPPENECLNDHHTCDPQSEQC-VDLADGFECVCGRGYNKSEEGGECVPV 229 (380)
Q Consensus 174 ~~~w~~~~C~d~deC~~g~~~C~~~~g~C-~n~~~g~~C~C~~Gy~G~~~~~~C~~~ 229 (380)
..+|.|..|.++|+|......|.. +| +++.++|+|.|++||++......|+.+
T Consensus 74 ~~G~~G~~C~~~deC~~~~~~C~~---~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~ 127 (146)
T 1x7a_L 74 QVGFEGKNCELDATCNIKNGRCKQ---FCKTGADSKVLCSCTTGYRLAPDQKSCKPA 127 (146)
T ss_dssp CSSEESTTTCEECCTTSGGGSCSS---BCCCCSSSCCCCBCCTTEEECTTSSSEEEC
T ss_pred CCCCcCCcCCCCccccCCCCCCcC---CCCCCCCCCEEeEcCCCcEeCCCCCcCCCC
Confidence 457889999999999765557762 89 999999999999999955432345543
No 67
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.29 E-value=0.0012 Score=66.09 Aligned_cols=46 Identities=30% Similarity=0.755 Sum_probs=38.0
Q ss_pred CCcCCCCccCCCCCcccccccCCCCCCCCCCCcccccccccCCCCCCcccccCCCCCCCCCCCcCCCCCCCCCC
Q psy9822 305 ECVPCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEGKENRQS 378 (380)
Q Consensus 305 ~C~~C~~~Cng~~~~C~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce~C~~Gy~g~~~ 378 (380)
.+-+|. ||+|+..|.... +.++|+ |+++|+|++||+|++|||+++-
T Consensus 293 v~g~C~--CnGHas~C~~~~-------------------------g~~~C~-C~~~ttG~~CE~C~pgy~~~P~ 338 (426)
T 3zyj_B 293 VRGRCK--CNLHATVCVYDN-------------------------SKLTCE-CEHNTTGPDCGKCKKNYQGRPW 338 (426)
T ss_dssp CEEEEC--CSSSCSCEEEET-------------------------TEEEEC-CCTTEESSSSCEECTTCCSSCC
T ss_pred ccccCc--CCCchhhcCCCC-------------------------CCceee-CCCCCcCCCccccccccccCcc
Confidence 345788 999999887421 357999 9999999999999999998753
No 68
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=96.14 E-value=0.0078 Score=57.29 Aligned_cols=53 Identities=28% Similarity=0.755 Sum_probs=41.9
Q ss_pred CCCccCCCCC-CCccccCC-CCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc
Q psy9822 174 SFSWNYVKCP-PENECLND-HHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV 229 (380)
Q Consensus 174 ~~~w~~~~C~-d~deC~~g-~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~ 229 (380)
..+|.|..|. ++|||... ...|. + .|+|+.++|+|.|++||.+......|.+.
T Consensus 31 ~~g~~g~~C~~~~~eC~~~~~~~C~-~--~C~~~~g~~~C~C~~g~~~~~~~~~C~~~ 85 (317)
T 3h5c_B 31 SPGYEGSNCELAKNECHPERTDGCQ-H--FCLPGQESYTCSCAQGYRLGEDHKQCVPH 85 (317)
T ss_dssp SSSCCSSSSCCCSSSCCTTCTTSCS-S--EEECCSSSCEEECCTTEECCTTSSCCEEC
T ss_pred CCCCcCCccccCcccCCCCCCCCCc-C--ccccCCCeeEEeccccccccccccccccc
Confidence 4578889998 99999753 36887 3 89999999999999999987643455553
No 69
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.08 E-value=0.00078 Score=54.62 Aligned_cols=38 Identities=32% Similarity=0.926 Sum_probs=4.3
Q ss_pred CCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 180 VKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 180 ~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
..|.|+|||.. .+.|. ++|+|++++|+|.|++||.++.
T Consensus 64 ~~C~dideC~~-~~~C~---~~C~n~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 64 RRCEDIDECQD-PDTCS---QLCVNLEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp TEEEC-------------------------------------
T ss_pred CccccccccCC-CCCcC---CeeecCCCCEEEECCCCceECC
Confidence 67999999963 35675 6899999999999999999875
No 70
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=96.01 E-value=0.0017 Score=62.99 Aligned_cols=43 Identities=35% Similarity=0.797 Sum_probs=35.8
Q ss_pred CCCCccCCCCCcccccccCCCCCCCCCCCcccccccccCCCCCCcccccCCCCCCCCCCCcCCCCCCCCCC
Q psy9822 308 PCSEYCNGHTGLCINASLASLPFSPESGGTSELAAFLDEGPTTRARCMHCGNHTTGPKCEDCVEGKENRQS 378 (380)
Q Consensus 308 ~C~~~Cng~~~~C~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~g~C~~C~~g~~G~~Ce~C~~Gy~g~~~ 378 (380)
.|. ||||+..|.... +.++|. |+.+++|++||+|++||++.+-
T Consensus 269 ~C~--CnGHA~~C~~~~-------------------------g~~~C~-C~HnT~G~~Ce~C~p~y~~~pw 311 (338)
T 3tbd_A 269 RCK--CNLHANLCSMRE-------------------------GSLQCE-CEHNTTGPDCGKCKKNFRTRSW 311 (338)
T ss_dssp EEC--CTTBCSCEEEET-------------------------TEEEEC-CCTTEESTTSCEECTTCBSSCC
T ss_pred ccc--ccCCcCccCCCC-------------------------CCceec-CCCCCCCCCCcccCccccCCCC
Confidence 477 999999997421 346898 9999999999999999998763
No 71
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=95.82 E-value=0.0014 Score=53.86 Aligned_cols=39 Identities=33% Similarity=0.687 Sum_probs=32.4
Q ss_pred CCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 179 YVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 179 ~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
+..|.++|||.. .++| .++|+|++++|+|.|++||++..
T Consensus 74 g~~C~dideC~~-~~~C---~~~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 74 GFICTDIDECEN-GGFC---SGVCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp TTEEEECCHHHH-CSSC---SSEEEECSSSEEEEECSSSSCEE
T ss_pred CCccccccccCC-CCCC---cCeEEeCCCCEEEECCCCCccCC
Confidence 678889999965 3567 57899999999999999998764
No 72
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=95.62 E-value=0.0042 Score=44.05 Aligned_cols=40 Identities=33% Similarity=0.888 Sum_probs=28.9
Q ss_pred ccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCccc
Q psy9822 186 NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVP 228 (380)
Q Consensus 186 deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~ 228 (380)
|||....+.|. ..|+|++++|+|.|++||........|++
T Consensus 2 dEC~~~~~~C~---~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d 41 (55)
T 2jkh_L 2 KLCSLDNGDCD---QFCHEEQNSVVCSCARGYTLADNGKACIP 41 (55)
T ss_dssp CCTTTGGGGCS---SEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred ccccCCCCCcC---cEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence 57755445675 37999999999999999986543334544
No 73
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=95.58 E-value=0.009 Score=40.42 Aligned_cols=27 Identities=22% Similarity=0.562 Sum_probs=22.5
Q ss_pred CCCCCCCeee--cCCCCcccccCCCceecC
Q psy9822 194 TCDPQSEQCV--DLADGFECVCGRGYNKSE 221 (380)
Q Consensus 194 ~C~~~~g~C~--n~~~g~~C~C~~Gy~G~~ 221 (380)
+|. ++|+|+ +..++|+|.|++||+|..
T Consensus 10 pC~-ngg~C~~~~~~~~~~C~C~~G~~G~~ 38 (45)
T 1a3p_A 10 YCL-NGGVXMHIESLDSYTCNCVIGYSGDR 38 (45)
T ss_dssp CCS-SSCEEEECTTTSSEEEECCTTEETTT
T ss_pred CCC-CCCEEEeecCCCCEEEEcCCCCcCCc
Confidence 676 778997 677899999999998876
No 74
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.45 E-value=0.0066 Score=59.83 Aligned_cols=45 Identities=31% Similarity=0.833 Sum_probs=35.7
Q ss_pred CCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcc
Q psy9822 179 YVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV 227 (380)
Q Consensus 179 ~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~ 227 (380)
+..|.|+|||. ....|.. .|+|++++|+|.|.+||.+......|.
T Consensus 34 ~~~C~dideC~-~~~~C~~---~C~n~~g~~~C~C~~g~~~~~~~~~C~ 78 (400)
T 3p5b_L 34 QRRCEDIDECQ-DPDTCSQ---LCVNLEGGYKCQCEEGFQLDPHTKACK 78 (400)
T ss_dssp SSCEEECCCCS-TTSSCSS---CCBCCSSSCBCCCCTTCCCCTTTSSCC
T ss_pred CCcccCchhhh-ccCCCCC---ccCCCccceeeecccccccccccccee
Confidence 57799999996 4467862 899999999999999999876433443
No 75
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=95.36 E-value=0.0056 Score=41.91 Aligned_cols=36 Identities=28% Similarity=0.592 Sum_probs=24.3
Q ss_pred CCccccCC-CCCCCCCCCeeecCC--CCcccccCCCceecC
Q psy9822 184 PENECLND-HHTCDPQSEQCVDLA--DGFECVCGRGYNKSE 221 (380)
Q Consensus 184 d~deC~~g-~~~C~~~~g~C~n~~--~g~~C~C~~Gy~G~~ 221 (380)
++++|... .++|. + |+|++.. ++|.|.|++||+|..
T Consensus 2 ~i~~C~~~~~~pC~-n-G~C~~~~~~~~~~C~C~~GytG~~ 40 (46)
T 1k36_A 2 SITKCSSDMNGYCL-H-GQCIYLVDMSQNYCRCEVGYTGVR 40 (46)
T ss_dssp CEECCCTTCCSSCS-S-EEEEEETTTTEEEEEECTTCSSTT
T ss_pred ccccCCCCCCCCCC-C-CEeeccCCCCCEEEECCCCCccCC
Confidence 34566432 24776 5 7898744 678888888888865
No 76
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=95.17 E-value=0.008 Score=50.40 Aligned_cols=53 Identities=28% Similarity=0.693 Sum_probs=30.2
Q ss_pred CCCccCCCCCC-C-ccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc
Q psy9822 174 SFSWNYVKCPP-E-NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV 229 (380)
Q Consensus 174 ~~~w~~~~C~d-~-deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~ 229 (380)
..+|.|..|.+ + |+|......|. . +|+++.++|+|.|++||++......|+.+
T Consensus 68 ~~G~~G~~C~~~i~d~C~~~~~~C~-~--~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~ 122 (134)
T 2vh0_B 68 LEGFEGKNCELFTRKLCSLDNGDCD-Q--FCHEEQNSVVCSCARGYTLADNGKACIPT 122 (134)
T ss_dssp -------------CCGGGTGGGGCS-S--EEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred CCCccCCccccCCCCccccCCCCCC-C--EeECCCCCEEEECCCCcEECCCCCccCcC
Confidence 35688889987 6 88976555676 2 89999999999999999954322345543
No 77
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.13 E-value=0.018 Score=61.04 Aligned_cols=65 Identities=34% Similarity=0.872 Sum_probs=46.0
Q ss_pred CCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc--CC--CCCcCCcccC---CCccccCCCccc
Q psy9822 184 PENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CS--QGCVRGVCSE---PDKCQCDFGYVG 253 (380)
Q Consensus 184 d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~--C~--~~C~~G~C~~---~~~C~C~~G~~G 253 (380)
+++||....+.|. .+|++++++|+|.|++||.+.. ...|+.+ |. ..|. ..|++ .++|.|++||++
T Consensus 293 ~~~eC~~~~~~C~---~~C~~~~~~~~C~C~~G~~~~~-~~~C~dideC~~~~~C~-~~C~n~~g~y~C~C~~G~~~ 364 (699)
T 1n7d_A 293 GTNECLDNNGGCS---HVCNDLKIGYECLCPDGFQLVA-QRRCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQL 364 (699)
T ss_dssp CCCCTTSSTTTSC---TTCCCCTTCCCCCCCSSSCCCS-SSCCCCCCCCSSSSSCT-TTCCBCSSCBCCCCCSSCBC
T ss_pred ccccccccccCcC---CCcccCCCCcEEeCCCCeEcCC-CCcccCccccCCCCccc-cccccCCCCeeeeeeccccc
Confidence 4677866555664 4799999999999999999521 2346655 54 2354 36765 469999999986
No 78
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=95.00 E-value=0.0095 Score=53.50 Aligned_cols=53 Identities=28% Similarity=0.693 Sum_probs=31.0
Q ss_pred CCCccCCCCCC-C-ccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc
Q psy9822 174 SFSWNYVKCPP-E-NECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV 229 (380)
Q Consensus 174 ~~~w~~~~C~d-~-deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~ 229 (380)
..+|.|..|.+ + ++|......|. . +|+++.++|+|.|++||++......|+.+
T Consensus 68 ~~Gf~G~~Ce~~i~deC~~~~~~C~-~--~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~ 122 (195)
T 1nfu_B 68 LEGFEGKNCELFTRKLCSLDNGDCD-Q--FCHEEQNSVVCSCARGYTLADNGKACIPT 122 (195)
T ss_dssp -------------CCGGGTGGGGCS-S--EEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred CCCceeccccccccccccCCCCCCC-C--EeECCCCCeEEECCCCceeCCCCCccccC
Confidence 35688899986 5 89976556787 2 89999999999999999944322346654
No 79
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=94.96 E-value=0.011 Score=52.46 Aligned_cols=33 Identities=36% Similarity=0.986 Sum_probs=27.8
Q ss_pred cccc-CCCCCc-CCcccCCCccccCCCcccccccc
Q psy9822 226 CVPV-CSQGCV-RGVCSEPDKCQCDFGYVGVNCSI 258 (380)
Q Consensus 226 C~~~-C~~~C~-~G~C~~~~~C~C~~G~~G~~C~~ 258 (380)
|... |...|. .|.|+.|++|.|+.||+|..|+.
T Consensus 146 C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 146 CQQAECPGGCRNGGFCNERRICECPDGFHGPHCEG 180 (188)
T ss_dssp ECCCCCTTCCCTTCEECTTSCEECCTTCBTTTTCB
T ss_pred ccCCccCCCCCCCCEeCCCCcccCcCCCCCCCCcC
Confidence 5544 777887 48999999999999999999885
No 80
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=94.86 E-value=0.0087 Score=58.05 Aligned_cols=47 Identities=32% Similarity=0.796 Sum_probs=38.7
Q ss_pred cCCCCCCCc-ccCCCCCcccccCCCCCCCCCCCCCCCCccCCCCCCCCC
Q psy9822 259 QCQCNGHAD-CAGPDKLDVCLRCHNHTKGPQCDKCEPLYVGDPRDNGEC 306 (380)
Q Consensus 259 ~c~C~~~~~-C~~~~~~g~C~~C~~~~~G~~C~~C~~g~~G~~~~~~~C 306 (380)
.|.|++|+. |....+.+.| .|+++++|.+|++|+++|++.|...+.-
T Consensus 269 ~C~CnGHA~~C~~~~g~~~C-~C~HnT~G~~Ce~C~p~y~~~pw~pg~~ 316 (338)
T 3tbd_A 269 RCKCNLHANLCSMREGSLQC-ECEHNTTGPDCGKCKKNFRTRSWRAGSY 316 (338)
T ss_dssp EECCTTBCSCEEEETTEEEE-CCCTTEESTTSCEECTTCBSSCCCCCBC
T ss_pred cccccCCcCccCCCCCCcee-cCCCCCCCCCCcccCccccCCCCCCCCc
Confidence 478999975 8765556789 5999999999999999999999765443
No 81
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=94.14 E-value=0.016 Score=40.89 Aligned_cols=28 Identities=25% Similarity=0.623 Sum_probs=21.8
Q ss_pred CCCCCCCCeee--cCCCCcccccCCCceecC
Q psy9822 193 HTCDPQSEQCV--DLADGFECVCGRGYNKSE 221 (380)
Q Consensus 193 ~~C~~~~g~C~--n~~~g~~C~C~~Gy~G~~ 221 (380)
++|. ++|+|+ +..++|.|.|++||+|..
T Consensus 12 ~pC~-nGG~C~~~~~~~~~~C~C~~GytG~~ 41 (53)
T 1nql_B 12 GYCL-HDGVCMYIEALDKYACNCVVGYIGER 41 (53)
T ss_dssp CEEC-TTCEEEEETTTTEEEEEECTTEESTT
T ss_pred CCCC-CCeEEeeecCCCCEEEecCCCCcCCC
Confidence 3565 678897 677788899888888876
No 82
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=94.10 E-value=0.022 Score=42.40 Aligned_cols=43 Identities=28% Similarity=0.726 Sum_probs=31.6
Q ss_pred CCCccccCCCCCCCCCCCeeecCCC-CcccccCCCceecCCCCCccc
Q psy9822 183 PPENECLNDHHTCDPQSEQCVDLAD-GFECVCGRGYNKSEEGGECVP 228 (380)
Q Consensus 183 ~d~deC~~g~~~C~~~~g~C~n~~~-g~~C~C~~Gy~G~~~~~~C~~ 228 (380)
.|+|||......|. ..|+++++ +|.|.|++||........|.+
T Consensus 3 ~d~~eC~~~nggC~---h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d 46 (69)
T 1kli_L 3 DDQLICVNENGGCE---QYCSDHTGTKRSCRCHEGYSLLADGVSCTP 46 (69)
T ss_dssp SCCCCTTSGGGGCS---SEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred cccccccCCCCCcC---CEeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence 57888865555675 37999998 799999999986543344544
No 83
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.87 E-value=0.029 Score=60.51 Aligned_cols=64 Identities=34% Similarity=0.894 Sum_probs=41.3
Q ss_pred CccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcccc--CCC--CCcCCcccC---CCccccCCCccc
Q psy9822 185 ENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVPV--CSQ--GCVRGVCSE---PDKCQCDFGYVG 253 (380)
Q Consensus 185 ~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~~--C~~--~C~~G~C~~---~~~C~C~~G~~G 253 (380)
++||..+...|. ..|++++++|+|.|++||.+.. ...|+.+ |.. .|. ..|++ .++|.|.+||.+
T Consensus 312 ~~~C~~~~~~C~---~~C~~~~~~y~C~C~~Gy~l~~-g~~C~dideC~~~~~C~-~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 312 TNECLDNNGGCS---HVCNDLKIGYECLCPDGFQLVA-QRRCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp CCSTTTGGGGCS---SEEEECSBSEEEECCTTCEEET-TTEEECCCCCSSSSSCT-TTCCBCSSCBCCCCCSSEEC
T ss_pred cccccccccCcc---ccccCCCCCcccCCCCCCccCC-CCccccCcccCCCCCCC-CeeecCCCCceeecCCCCEe
Confidence 455644434443 3799999999999999998621 2446654 542 243 35665 458888888864
No 84
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=93.54 E-value=0.026 Score=40.11 Aligned_cols=31 Identities=23% Similarity=0.601 Sum_probs=17.6
Q ss_pred CCCCCCCccc-----CCCCCcccccCCCCCCCCCCCC
Q psy9822 260 CQCNGHADCA-----GPDKLDVCLRCHNHTKGPQCDK 291 (380)
Q Consensus 260 c~C~~~~~C~-----~~~~~g~C~~C~~~~~G~~C~~ 291 (380)
.+|.+.++|. +..+.+.|. |.++|+|.+||.
T Consensus 14 ~pC~NgGtC~~~~~~d~~~~y~C~-C~~g~~G~~CE~ 49 (55)
T 3u7u_G 14 TFCVNGGECFMVKDLSNPSRYLCK-CPNEFTGDRCQN 49 (55)
T ss_dssp TTSCTTCEEEEECCC--CCCEEEE-ECTTEESTTSCE
T ss_pred CCCCCCCCcCCCCccCCCCCEeEe-CCCCCcCCCcCc
Confidence 3566666662 233456673 777777776653
No 85
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=93.50 E-value=0.006 Score=42.72 Aligned_cols=29 Identities=24% Similarity=0.535 Sum_probs=14.2
Q ss_pred CCCCCCcccC----CCCCcccccCCCCCCCCCCC
Q psy9822 261 QCNGHADCAG----PDKLDVCLRCHNHTKGPQCD 290 (380)
Q Consensus 261 ~C~~~~~C~~----~~~~g~C~~C~~~~~G~~C~ 290 (380)
+|.+.++|.. ..+.+.|. |..+|+|.+|+
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~-C~~Gf~G~~Ce 47 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCE-CAIGFMGQRCE 47 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEE-CCTTEESTTSC
T ss_pred cCCCCCEEecCccCCCCCEEEE-CCCCCcCCCCc
Confidence 4445555542 12234563 66666665554
No 86
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=93.00 E-value=0.054 Score=39.18 Aligned_cols=28 Identities=18% Similarity=0.570 Sum_probs=22.7
Q ss_pred CCCCCCCCeeec-----CCCCcccccCCCceecC
Q psy9822 193 HTCDPQSEQCVD-----LADGFECVCGRGYNKSE 221 (380)
Q Consensus 193 ~~C~~~~g~C~n-----~~~g~~C~C~~Gy~G~~ 221 (380)
.+|. ++|+|++ ..++|+|.|++||+|..
T Consensus 12 ~pC~-ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~ 44 (63)
T 1hae_A 12 TFCV-NGGECFMVKDLSNPSRYLCKCQPGFTGAR 44 (63)
T ss_dssp TTSC-TTCEEEEEESSSSSCCEEEECCTTEESTT
T ss_pred CcCC-CCcEEecCCccCCCCCEEEECCCCCcCCc
Confidence 4676 7889986 56789999999998876
No 87
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=92.96 E-value=0.024 Score=38.69 Aligned_cols=27 Identities=37% Similarity=1.016 Sum_probs=17.6
Q ss_pred CCCcCCcccC-----CCccccCCCcccccccc
Q psy9822 232 QGCVRGVCSE-----PDKCQCDFGYVGVNCSI 258 (380)
Q Consensus 232 ~~C~~G~C~~-----~~~C~C~~G~~G~~C~~ 258 (380)
++|.||+|+. .+.|.|++||+|.+|++
T Consensus 12 ~pC~nG~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 12 GYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp SSCSSEEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred CCCCCCEeeccCCCCCEEEECCCCCccCCCCc
Confidence 3566677763 24677777777777764
No 88
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.34 E-value=0.71 Score=48.74 Aligned_cols=100 Identities=22% Similarity=0.514 Sum_probs=56.5
Q ss_pred CCCCCcccc-CCCCCCCCCCCeeecCCC--CcccccCCCceecCCCCCcccc-CCC---CCcCCcccC---CCccccCCC
Q psy9822 181 KCPPENECL-NDHHTCDPQSEQCVDLAD--GFECVCGRGYNKSEEGGECVPV-CSQ---GCVRGVCSE---PDKCQCDFG 250 (380)
Q Consensus 181 ~C~d~deC~-~g~~~C~~~~g~C~n~~~--g~~C~C~~Gy~G~~~~~~C~~~-C~~---~C~~G~C~~---~~~C~C~~G 250 (380)
.|..+++|. .....|. ++.|++... .+.+.|..|+.... ..|... |.. .|. ..|++ .++|.|++|
T Consensus 248 ~C~~~~~C~~~~~~~C~--~g~Ci~~~~~Cd~~~dC~dgsDe~~--~~C~~~eC~~~~~~C~-~~C~~~~~~~~C~C~~G 322 (699)
T 1n7d_A 248 GCVNVTLCEGPNKFKCH--SGECITLDKVCNMARDCRDWSDEPI--KECGTNECLDNNGGCS-HVCNDLKIGYECLCPDG 322 (699)
T ss_dssp STTCCCCCCSTTCCCCT--TSCCCCSSCCSCSSCCSSSSCSCCC--SSCCCCCTTSSTTTSC-TTCCCCTTCCCCCCCSS
T ss_pred CCCCCCcccCCCceecC--CCcEeCCcccccccceecCcccccc--cccccccccccccCcC-CCcccCCCCcEEeCCCC
Confidence 344444452 2223554 466765432 34567777765432 234322 421 132 35665 469999999
Q ss_pred cc---cccccccCCCCCC----CcccCCCCCcccccCCCCCCC
Q psy9822 251 YV---GVNCSIQCQCNGH----ADCAGPDKLDVCLRCHNHTKG 286 (380)
Q Consensus 251 ~~---G~~C~~~c~C~~~----~~C~~~~~~g~C~~C~~~~~G 286 (380)
|. |..|+...+|... ..|.+..+.+.|. |.++|.+
T Consensus 323 ~~~~~~~~C~dideC~~~~~C~~~C~n~~g~y~C~-C~~G~~~ 364 (699)
T 1n7d_A 323 FQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQ-CEEGFQL 364 (699)
T ss_dssp SCCCSSSCCCCCCCCSSSSSCTTTCCBCSSCBCCC-CCSSCBC
T ss_pred eEcCCCCcccCccccCCCCccccccccCCCCeeee-eeccccc
Confidence 99 6778654445322 3577777778884 8777764
No 89
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.30 E-value=0.044 Score=53.49 Aligned_cols=45 Identities=27% Similarity=0.698 Sum_probs=18.9
Q ss_pred CCCCCCCccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcc
Q psy9822 179 YVKCPPENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV 227 (380)
Q Consensus 179 ~~~C~d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~ 227 (380)
+..|.|+|||. ....|.. .|+|++++|+|.|++||........|+
T Consensus 38 ~~~C~d~~eC~-~~~~C~~---~C~~~~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 38 GRTCQDVNECA-EEGYCSQ---GCTNSEGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp ---------------CCTT---EEC-----CCEECCTTEEECTTSSCEE
T ss_pred CCccCccceeC-CcCcccC---cCCCCCCCCeEEECCCceEcCCCCeEC
Confidence 57899999995 4457872 499999999999999998554323454
No 90
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=92.28 E-value=0.079 Score=44.59 Aligned_cols=52 Identities=23% Similarity=0.621 Sum_probs=34.7
Q ss_pred CCCccCCCCCC-Cccc---cCCCCCCCCCCCeeecCCC-CcccccCCCceecCCCCCccc
Q psy9822 174 SFSWNYVKCPP-ENEC---LNDHHTCDPQSEQCVDLAD-GFECVCGRGYNKSEEGGECVP 228 (380)
Q Consensus 174 ~~~w~~~~C~d-~deC---~~g~~~C~~~~g~C~n~~~-g~~C~C~~Gy~G~~~~~~C~~ 228 (380)
..+|.|..|.+ +++| ......|. .+|+++.+ +|+|.|++||++......|+.
T Consensus 73 ~~G~~G~~C~~~~~~c~~c~~~~~~C~---~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 73 LPAFEGRNCETHKDDQLICVNENGGCE---QYCSDHTGTKRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp CTTEESTTSCEEGGGCCSTTTGGGGCS---SEEECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred CCCccCCccccCccccccccCCCCCcc---CEeECCCCCCEEEECCCCceECCCCCCCCC
Confidence 45688888976 5664 22222343 18999999 999999999995432233543
No 91
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=91.68 E-value=0.084 Score=36.62 Aligned_cols=28 Identities=25% Similarity=0.717 Sum_probs=21.6
Q ss_pred eeecCCCCcccccCCCceecCCCCCccc
Q psy9822 201 QCVDLADGFECVCGRGYNKSEEGGECVP 228 (380)
Q Consensus 201 ~C~n~~~g~~C~C~~Gy~G~~~~~~C~~ 228 (380)
.|+|++++|+|.|++||........|++
T Consensus 11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~d 38 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYVLGDDSKSCVS 38 (51)
T ss_dssp CCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred EeEcCCCCeEEeCCCCcEECCCCCcccc
Confidence 6999999999999999986543234443
No 92
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=91.55 E-value=0.062 Score=34.76 Aligned_cols=29 Identities=21% Similarity=0.525 Sum_probs=14.7
Q ss_pred CCCCCCcccCCCCCcccccCCCCCCCCCCC
Q psy9822 261 QCNGHADCAGPDKLDVCLRCHNHTKGPQCD 290 (380)
Q Consensus 261 ~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~ 290 (380)
+|.++++|++..+.+.|. |+.+|+|.+|+
T Consensus 10 pC~ngg~C~~~~~~~~C~-C~~G~~G~~Ce 38 (39)
T 1edm_B 10 PCLNGGSCKDDINSYECW-CPFGFEGKNCE 38 (39)
T ss_dssp CCCTTCEEEEETTEEEEE-CCTTCCSTTSC
T ss_pred CCCCCCEeEcCCCceEeE-CCCCCcCCccC
Confidence 344445554444455553 55555555553
No 93
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=90.77 E-value=0.32 Score=52.32 Aligned_cols=100 Identities=23% Similarity=0.539 Sum_probs=50.2
Q ss_pred CCCCCCcccc-CCCCCCCCCCCeeecCCC--CcccccCCCceecCCCCCcccc-CCC---CCcCCcccC---CCccccCC
Q psy9822 180 VKCPPENECL-NDHHTCDPQSEQCVDLAD--GFECVCGRGYNKSEEGGECVPV-CSQ---GCVRGVCSE---PDKCQCDF 249 (380)
Q Consensus 180 ~~C~d~deC~-~g~~~C~~~~g~C~n~~~--g~~C~C~~Gy~G~~~~~~C~~~-C~~---~C~~G~C~~---~~~C~C~~ 249 (380)
..|..+++|. .....|. +|.|++... ...+.|..|+-... ..|... |.. .|. ..|++ .++|.|+.
T Consensus 265 ~~C~~~~~C~~~~~~~C~--~G~Ci~~~~~Cd~~~dC~dgsDe~~--~~C~~~~C~~~~~~C~-~~C~~~~~~y~C~C~~ 339 (791)
T 3m0c_C 265 VGCVNVTLCEGPNKFKCH--SGECITLDKVCNMARDCRDWSDEPI--KECGTNECLDNNGGCS-HVCNDLKIGYECLCPD 339 (791)
T ss_dssp --------CCSTTCCCCT--TSCCCCSSCCSCSSCCSSSSCSCCC--TTBSCCSTTTGGGGCS-SEEEECSBSEEEECCT
T ss_pred CcccccccccCCCccccC--CCcccccccccCCccccccccCccc--cccccccccccccCcc-ccccCCCCCcccCCCC
Confidence 3444444452 1223564 466766443 34557777765433 234332 432 132 25665 46999999
Q ss_pred Ccc---cccccccCCCCCCC----cccCCCCCcccccCCCCCC
Q psy9822 250 GYV---GVNCSIQCQCNGHA----DCAGPDKLDVCLRCHNHTK 285 (380)
Q Consensus 250 G~~---G~~C~~~c~C~~~~----~C~~~~~~g~C~~C~~~~~ 285 (380)
||. |..|....+|.... .|.+..+.+.|. |.++|.
T Consensus 340 Gy~l~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~-C~~Gy~ 381 (791)
T 3m0c_C 340 GFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQ-CEEGFQ 381 (791)
T ss_dssp TCEEETTTEEECCCCCSSSSSCTTTCCBCSSCBCCC-CCSSEE
T ss_pred CCccCCCCccccCcccCCCCCCCCeeecCCCCceee-cCCCCE
Confidence 995 77787544454222 455555666663 655554
No 94
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=90.43 E-value=0.29 Score=40.20 Aligned_cols=24 Identities=17% Similarity=0.497 Sum_probs=17.6
Q ss_pred CCCeeecCC--CCc-ccccCCCceecC
Q psy9822 198 QSEQCVDLA--DGF-ECVCGRGYNKSE 221 (380)
Q Consensus 198 ~~g~C~n~~--~g~-~C~C~~Gy~G~~ 221 (380)
++|+|++.. .++ +|.|++||+|..
T Consensus 5 nggtC~~~~~~~~~~~C~Cp~g~~G~~ 31 (122)
T 2fd6_A 5 NGGTCVSNKYFSNIHWCNCPKKFGGQH 31 (122)
T ss_dssp SSCEEEECTTTTTCEEEECCTTEESTT
T ss_pred CcCCcCCCcccCCCCCccCCCCCCCcc
Confidence 677888764 555 788888888765
No 95
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=90.34 E-value=0.081 Score=36.81 Aligned_cols=24 Identities=17% Similarity=0.529 Sum_probs=14.5
Q ss_pred CCCeeec----CCCCcccccCCCceecC
Q psy9822 198 QSEQCVD----LADGFECVCGRGYNKSE 221 (380)
Q Consensus 198 ~~g~C~n----~~~g~~C~C~~Gy~G~~ 221 (380)
++|+|++ ..++|+|.|++||+|..
T Consensus 18 NGGtC~~~~~~~~~~y~C~C~~Gf~G~~ 45 (52)
T 3ca7_A 18 NDAHCFAVKIADLPVYSCECAIGFMGQR 45 (52)
T ss_dssp TTCEEEEEEETTEEEEEEECCTTEESTT
T ss_pred CCCEEecCccCCCCCEEEECCCCCcCCC
Confidence 5666765 23456666666666654
No 96
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=90.17 E-value=0.24 Score=34.41 Aligned_cols=30 Identities=20% Similarity=0.416 Sum_probs=17.0
Q ss_pred CCCCCCccc--CCCCCcccccCCCCCCCCCCCC
Q psy9822 261 QCNGHADCA--GPDKLDVCLRCHNHTKGPQCDK 291 (380)
Q Consensus 261 ~C~~~~~C~--~~~~~g~C~~C~~~~~G~~C~~ 291 (380)
+|.++++|. +..+.+.|. |..+|+|.+|+.
T Consensus 13 pC~ngg~C~~~~~~~~~~C~-C~~G~~G~~Ce~ 44 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCN-CVIGYSGDRCQT 44 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEE-CCTTCCSSSSCC
T ss_pred cCCCCcEEEeeCCCCCEEEE-CCCCCcCCcCCc
Confidence 455555565 444556663 666666666653
No 97
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=89.34 E-value=0.17 Score=33.94 Aligned_cols=29 Identities=17% Similarity=0.295 Sum_probs=18.5
Q ss_pred CCCCCCccc--CCCCCcccccCCCCCCCCCCC
Q psy9822 261 QCNGHADCA--GPDKLDVCLRCHNHTKGPQCD 290 (380)
Q Consensus 261 ~C~~~~~C~--~~~~~g~C~~C~~~~~G~~C~ 290 (380)
+|.++++|. +..+.+.|. |.++|+|.+|+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~-C~~G~~G~~Ce 40 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCN-CVIGYSGDRCQ 40 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEE-CCTTEETTTTC
T ss_pred CCCCCCEEEeecCCCCEEEE-cCCCCcCCcCC
Confidence 566666665 344566774 77777777665
No 98
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=88.65 E-value=0.32 Score=34.72 Aligned_cols=28 Identities=32% Similarity=0.760 Sum_probs=21.8
Q ss_pred eeecCC-CCcccccCCCceecCCCCCccc
Q psy9822 201 QCVDLA-DGFECVCGRGYNKSEEGGECVP 228 (380)
Q Consensus 201 ~C~n~~-~g~~C~C~~Gy~G~~~~~~C~~ 228 (380)
.|++++ ++|.|.|++||........|.+
T Consensus 12 ~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 12 FCKNSADNKVVCSCTEGYRLAENQKSCEP 40 (59)
T ss_dssp EEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred EeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence 699999 5999999999986654344554
No 99
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=88.10 E-value=0.22 Score=42.78 Aligned_cols=51 Identities=25% Similarity=0.547 Sum_probs=34.7
Q ss_pred CCccCCC-CCCCccccCCCC---CCCCCCCeeecCCCCcccccCCCceecCCCCCccc
Q psy9822 175 FSWNYVK-CPPENECLNDHH---TCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVP 228 (380)
Q Consensus 175 ~~w~~~~-C~d~deC~~g~~---~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~ 228 (380)
.+|.... +.+++||..... .|.. .|+|++++|+|.|++||........|++
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~---~C~n~~g~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH---HCHNHLGGFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS---EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred cCceeeeeccccCcccCCCCCCCccCC---ccccCCCCEEEeCCCCcEECCCCCcccc
Confidence 4554333 568889965432 3762 7999999999999999986543334443
No 100
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=87.90 E-value=0.12 Score=54.58 Aligned_cols=42 Identities=21% Similarity=0.517 Sum_probs=35.2
Q ss_pred ccCCCceecCCCCCcc--ccCCCCCc-CCcccCCCccccCCCcccccccc
Q psy9822 212 VCGRGYNKSEEGGECV--PVCSQGCV-RGVCSEPDKCQCDFGYVGVNCSI 258 (380)
Q Consensus 212 ~C~~Gy~G~~~~~~C~--~~C~~~C~-~G~C~~~~~C~C~~G~~G~~C~~ 258 (380)
.|.+||.|+. |. +.|+..|. ||+|+. ++|+|++||+|..|..
T Consensus 521 ~C~~gw~g~d----c~i~~~Cp~~C~ghG~C~~-G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 521 DKQQTWAIDN----VYIGDGCLDMCSGHGRCVQ-GSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CTTCCEEEEE----EEEESCSSGGGGGSEEEET-TEEEECTTEESTTSCE
T ss_pred ccCCCccccc----ccccCCCCcccCCCcEECC-CCEeeCCCccCCCcCc
Confidence 6799999987 66 34888887 899987 6899999999999885
No 101
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=87.07 E-value=0.2 Score=34.82 Aligned_cols=24 Identities=42% Similarity=1.111 Sum_probs=14.1
Q ss_pred CcCCcccC-----CCccccCCCccccccc
Q psy9822 234 CVRGVCSE-----PDKCQCDFGYVGVNCS 257 (380)
Q Consensus 234 C~~G~C~~-----~~~C~C~~G~~G~~C~ 257 (380)
|.||+|.. ...|.|+.||+|.+|+
T Consensus 16 C~nG~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 16 CFHGTCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred ccCCEEeeccCCCCeEEECCCCCcccCCC
Confidence 44555542 2366677777776665
No 102
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=86.87 E-value=0.16 Score=43.02 Aligned_cols=28 Identities=21% Similarity=0.768 Sum_probs=22.7
Q ss_pred CCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 193 HTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 193 ~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
.+|. +.++|++..++|+|+|++||.|..
T Consensus 125 ~~C~-~~g~C~~~~~~~~c~C~~g~~G~~ 152 (162)
T 1g1s_A 125 MSCS-KQGECLETIGNYTCSCYPGFYGPE 152 (162)
T ss_dssp TGGG-GSEEEEECSSSEEEEECTTEESTT
T ss_pred CCCC-CCCEEecCCCCceEeCCCCCcCcc
Confidence 3565 678899988899999999998876
No 103
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=85.45 E-value=0.22 Score=35.51 Aligned_cols=27 Identities=19% Similarity=0.549 Sum_probs=19.5
Q ss_pred CCCCCCCeee--c--CCCCcccccCCCceecC
Q psy9822 194 TCDPQSEQCV--D--LADGFECVCGRGYNKSE 221 (380)
Q Consensus 194 ~C~~~~g~C~--n--~~~g~~C~C~~Gy~G~~ 221 (380)
.|. ++|+|+ + ...+|.|.|++||+|..
T Consensus 15 pC~-NGGtC~~~~~~~~~~~~C~C~~Gf~G~~ 45 (58)
T 3ltf_D 15 YCL-NDAHCFAVKIADLPVYSCECAIGFMGQR 45 (58)
T ss_dssp TSC-SSCEEEEEEETTEEEEEEEECTTEESSS
T ss_pred cCC-CCCEEeCCccCCCCCEEeECCCCCccCC
Confidence 354 678897 3 34578888888888876
No 104
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=85.23 E-value=0.26 Score=34.19 Aligned_cols=26 Identities=31% Similarity=0.879 Sum_probs=15.5
Q ss_pred CCCcCCcccC-----CCccccCCCccccccc
Q psy9822 232 QGCVRGVCSE-----PDKCQCDFGYVGVNCS 257 (380)
Q Consensus 232 ~~C~~G~C~~-----~~~C~C~~G~~G~~C~ 257 (380)
.-|+||+|.. ...|.|+.||+|.+|+
T Consensus 18 ~yC~nG~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 18 NFCIHGECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp GTCSSSEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CcCCCCEEEEecCCCCeeEECCCCccccccc
Confidence 3456666652 1257777777777665
No 105
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=85.07 E-value=0.37 Score=33.55 Aligned_cols=28 Identities=32% Similarity=0.769 Sum_probs=21.4
Q ss_pred eeecCCC-CcccccCCCceecCCCCCccc
Q psy9822 201 QCVDLAD-GFECVCGRGYNKSEEGGECVP 228 (380)
Q Consensus 201 ~C~n~~~-g~~C~C~~Gy~G~~~~~~C~~ 228 (380)
.|+|+++ +|+|.|++||........|++
T Consensus 12 ~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d 40 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGYSLLADGVSCTP 40 (53)
T ss_dssp EEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred EeEcCCCCCEEeeCCCCCEECCCCCcccC
Confidence 6999998 699999999986543344544
No 106
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=82.65 E-value=0.79 Score=36.37 Aligned_cols=29 Identities=31% Similarity=0.684 Sum_probs=23.6
Q ss_pred CCCeeec-CCCCcccccCCCceecCCCCCccc
Q psy9822 198 QSEQCVD-LADGFECVCGRGYNKSEEGGECVP 228 (380)
Q Consensus 198 ~~g~C~n-~~~g~~C~C~~Gy~G~~~~~~C~~ 228 (380)
.++.|.+ .++..+|+|.+||.+++ ..|.+
T Consensus 14 ~NA~C~r~~~g~e~C~C~~gy~gdg--~~Cv~ 43 (99)
T 1ob1_C 14 QNSGCFRHLDEREECKCLLNYKQEG--DKCVE 43 (99)
T ss_dssp TTEEEECCTTSCCEEEECTTEEEET--TEEEE
T ss_pred CCCCeEEcCCCCEEEEecCCeecCC--CeEee
Confidence 6788987 56888999999999987 55654
No 107
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=82.48 E-value=0.53 Score=35.88 Aligned_cols=25 Identities=36% Similarity=0.929 Sum_probs=14.7
Q ss_pred CCcCCcccC-----CCccccCCCccccccc
Q psy9822 233 GCVRGVCSE-----PDKCQCDFGYVGVNCS 257 (380)
Q Consensus 233 ~C~~G~C~~-----~~~C~C~~G~~G~~C~ 257 (380)
.|.||+|+. ...|.|+.||+|.+|+
T Consensus 47 yClnG~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 47 FCIHGECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp CCSSEEECCBGGGTBCCEEECTTEESTTCC
T ss_pred cCCCCEeeeecCCCCeEEEcCCCccccccc
Confidence 355566632 2356677777776665
No 108
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=82.43 E-value=0.47 Score=34.03 Aligned_cols=31 Identities=19% Similarity=0.519 Sum_probs=21.9
Q ss_pred CCCCCCCcccC-----CCCCcccccCCCCCCCCCCCC
Q psy9822 260 CQCNGHADCAG-----PDKLDVCLRCHNHTKGPQCDK 291 (380)
Q Consensus 260 c~C~~~~~C~~-----~~~~g~C~~C~~~~~G~~C~~ 291 (380)
.+|.++++|.+ ..+.+.|. |+++|+|.+|+.
T Consensus 12 ~pC~ngG~C~~~~~~~~~~~y~C~-C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 12 TFCVNGGECFMVKDLSNPSRYLCK-CQPGFTGARCTE 47 (63)
T ss_dssp TTSCTTCEEEEEESSSSSCCEEEE-CCTTEESTTSCE
T ss_pred CcCCCCcEEecCCccCCCCCEEEE-CCCCCcCCccCc
Confidence 45666777763 34577884 888888888863
No 109
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=81.97 E-value=0.27 Score=34.03 Aligned_cols=25 Identities=40% Similarity=1.131 Sum_probs=14.2
Q ss_pred CcCCcccC-----CCccccCCCcccccccc
Q psy9822 234 CVRGVCSE-----PDKCQCDFGYVGVNCSI 258 (380)
Q Consensus 234 C~~G~C~~-----~~~C~C~~G~~G~~C~~ 258 (380)
|.||+|.. ...|.|+.||+|.+|+.
T Consensus 16 C~nG~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 16 CIKGRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp CTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred ccCCEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 55556631 12566666666666653
No 110
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=81.32 E-value=0.36 Score=33.69 Aligned_cols=14 Identities=43% Similarity=1.300 Sum_probs=7.6
Q ss_pred ccccCCCccccccc
Q psy9822 244 KCQCDFGYVGVNCS 257 (380)
Q Consensus 244 ~C~C~~G~~G~~C~ 257 (380)
.|.|+.||+|.+|+
T Consensus 30 ~C~C~~GytG~~Ce 43 (53)
T 1nql_B 30 ACNCVVGYIGERCQ 43 (53)
T ss_dssp EEEECTTEESTTSC
T ss_pred EEecCCCCcCCCCC
Confidence 55555555555554
No 111
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=81.31 E-value=0.97 Score=36.18 Aligned_cols=30 Identities=30% Similarity=0.657 Sum_probs=24.8
Q ss_pred CCCeeec-CCCCcccccCCCceecCCCCCcccc
Q psy9822 198 QSEQCVD-LADGFECVCGRGYNKSEEGGECVPV 229 (380)
Q Consensus 198 ~~g~C~n-~~~g~~C~C~~Gy~G~~~~~~C~~~ 229 (380)
.++.|.. .++..+|+|..||.+++ ..|.+.
T Consensus 20 ~NA~C~r~~~G~e~CrCl~gY~~dg--~~Cv~~ 50 (105)
T 1n1i_A 20 ENAACYRYLDGTEEWRCLLGFKEVG--GKCVPA 50 (105)
T ss_dssp TTEEEEECTTSCEEEEECTTEEECS--SSEEEC
T ss_pred CCCCeEECCCCCEeEEEECCeeccC--CEEEEC
Confidence 6788988 77888999999999987 556654
No 112
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=81.15 E-value=0.27 Score=52.00 Aligned_cols=41 Identities=27% Similarity=0.552 Sum_probs=35.4
Q ss_pred cccCCCcccccccc--c--CCCCCCCcccCCCCCcccccCCCCCCCCCCC
Q psy9822 245 CQCDFGYVGVNCSI--Q--CQCNGHADCAGPDKLDVCLRCHNHTKGPQCD 290 (380)
Q Consensus 245 C~C~~G~~G~~C~~--~--c~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~ 290 (380)
-.|.+||.|.+|.+ . ..|.+|+.|. .++|+ |.++|+|..|.
T Consensus 520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~----~G~C~-Cd~G~~G~~C~ 564 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCV----QGSCV-CDEQWGGLYCD 564 (725)
T ss_dssp CCTTCCEEEEEEEEESCSSGGGGGSEEEE----TTEEE-ECTTEESTTSC
T ss_pred CccCCCcccccccccCCCCcccCCCcEEC----CCCEe-eCCCccCCCcC
Confidence 47899999999985 3 4689999998 58995 99999999997
No 113
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=78.24 E-value=0.47 Score=34.26 Aligned_cols=23 Identities=13% Similarity=0.410 Sum_probs=10.4
Q ss_pred CcccCCCCCcccccCCCCCC-CCCC
Q psy9822 266 ADCAGPDKLDVCLRCHNHTK-GPQC 289 (380)
Q Consensus 266 ~~C~~~~~~g~C~~C~~~~~-G~~C 289 (380)
++|.+..+.+.|. |+++|+ |..|
T Consensus 25 gtC~~~~g~y~C~-C~~Gy~~G~~C 48 (61)
T 2k2s_B 25 GTCKETNSGYICR-CNQGYRISLDG 48 (61)
T ss_dssp CEEEECSSEEEEE-CCTTEEEEECS
T ss_pred cccccCCCceEeE-CCCCCccCCCC
Confidence 3444444444452 444444 4444
No 114
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=78.02 E-value=1.1 Score=31.00 Aligned_cols=18 Identities=28% Similarity=0.894 Sum_probs=15.8
Q ss_pred CCcccccCCCCCCCCCCCc
Q psy9822 350 TRARCMHCGNHTTGPKCED 368 (380)
Q Consensus 350 ~~g~C~~C~~g~~G~~Ce~ 368 (380)
....|. |.++|+|.+||.
T Consensus 28 ~~~~C~-C~~gy~G~RCe~ 45 (50)
T 3e50_C 28 DKPACV-CHSGYVGARCEH 45 (50)
T ss_pred CCeEEE-CCCCCcccCCCc
Confidence 457999 999999999984
No 115
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=78.02 E-value=0.83 Score=47.13 Aligned_cols=34 Identities=29% Similarity=0.706 Sum_probs=29.1
Q ss_pred CccccCCCCCCCCCCCeeec-CCCCcccccC-CCceecC
Q psy9822 185 ENECLNDHHTCDPQSEQCVD-LADGFECVCG-RGYNKSE 221 (380)
Q Consensus 185 ~deC~~g~~~C~~~~g~C~n-~~~g~~C~C~-~Gy~G~~ 221 (380)
+|+|. .++|. ++|+|++ ..++|+|.|. +||+|..
T Consensus 2 ~d~C~--~~PC~-ngG~C~~~~~~~y~C~C~~~G~~G~~ 37 (553)
T 1q4g_A 2 VNPCC--YYPCQ-HQGICVRFGLDRYQCDCTRTGYSGPN 37 (553)
T ss_dssp CCGGG--GCCCC-TTCEEEEETTTEEEEECTTSSEETTT
T ss_pred CCcCC--CCCCC-CCCCcCCCCCCceEeeCCCCCcCCCC
Confidence 46774 35787 8999999 8999999999 9999987
No 116
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=77.06 E-value=1.1 Score=42.81 Aligned_cols=39 Identities=28% Similarity=0.781 Sum_probs=21.1
Q ss_pred CccccCCCCCCCCCCCeeecCCCCcccccCCCceecCCCCCcc
Q psy9822 185 ENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECV 227 (380)
Q Consensus 185 ~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~ 227 (380)
+|||. ....|. ..|+|++++|+|.|.+||........|.
T Consensus 1 i~ec~-~~~~C~---~~C~n~~g~~~C~C~~g~~l~~d~~~C~ 39 (349)
T 3v64_C 1 VNECA-EEGYCS---QGCTNSEGAFQCWCEAGYELRPDRRSCK 39 (349)
T ss_dssp ---------CCS---SEECCC---CCEECCTTEEECTTSSCEE
T ss_pred CcccC-CCCCCc---CeeecCCCCeEEECCCCccCCCCCCccc
Confidence 46785 445676 3799999999999999998654334454
No 117
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=76.55 E-value=2 Score=29.66 Aligned_cols=23 Identities=17% Similarity=0.559 Sum_probs=18.9
Q ss_pred CCeee--cCCCCcccccCCCceecC
Q psy9822 199 SEQCV--DLADGFECVCGRGYNKSE 221 (380)
Q Consensus 199 ~g~C~--n~~~g~~C~C~~Gy~G~~ 221 (380)
+|+|. ...+.+.|+|++||+|+.
T Consensus 22 nG~C~~i~~~~~~~C~C~~gy~G~R 46 (50)
T 2rnl_A 22 HGECKYIEHLEAVTCKCQQEYFGER 46 (50)
T ss_dssp SSEEEEETTTTEEEEECCSSCCSSS
T ss_pred CCEEEEecCCCCeeEECCCCccccc
Confidence 57896 455678999999999986
No 118
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=73.94 E-value=1 Score=37.93 Aligned_cols=27 Identities=26% Similarity=0.904 Sum_probs=19.8
Q ss_pred CCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 194 TCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 194 ~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
.|. ..++|++...+|.|.|.+||.|..
T Consensus 126 ~C~-~~g~C~~~~~~~~c~C~~g~~g~~ 152 (164)
T 3cfw_A 126 SCS-GHGECVEIINNYTCNCDVGYYGPQ 152 (164)
T ss_dssp SSC-SSEEEEEETTEEEEEECTTCBSSS
T ss_pred cCC-CCCeecccCCCceeeeCCCccccc
Confidence 454 567788777788888888887765
No 119
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=73.33 E-value=2.1 Score=39.57 Aligned_cols=42 Identities=31% Similarity=0.877 Sum_probs=30.4
Q ss_pred CCccccCC-CCCCCCCCCeeecCCCCcccccCCCceecCCCCCccc
Q psy9822 184 PENECLND-HHTCDPQSEQCVDLADGFECVCGRGYNKSEEGGECVP 228 (380)
Q Consensus 184 d~deC~~g-~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~~~~~C~~ 228 (380)
+.|||... ...|. ..|.++.++|+|.|.+||........|.+
T Consensus 1 ~~~eC~~~~~~~C~---~~C~~~~~~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 1 AKNECHPERTDGCQ---HFCLPGQESYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp --CCCCSSCSSSCS---SBCCCCTTSCCCBCCTTEEECTTSSCEEE
T ss_pred CCCccCCCCCCCCC---CEeeCCCCCeEecCCCCcccCCCCCcccc
Confidence 35788655 45776 36999999999999999987654445665
No 120
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=72.86 E-value=1.9 Score=36.17 Aligned_cols=37 Identities=24% Similarity=0.588 Sum_probs=28.5
Q ss_pred CCCCccccCC-CCCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 182 CPPENECLND-HHTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 182 C~d~deC~~g-~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
+.++|||... ...|. ..|+|.+++++|.|.+||....
T Consensus 114 ~~d~~eC~~~~~~~C~---~~C~n~~g~~~C~C~~Gy~l~~ 151 (159)
T 1nzi_A 114 ATDINECTDFVDVPCS---HFCNNFIGGYFCSCPPEYFLHD 151 (159)
T ss_dssp EEECCTTTC-CCCCSS---SEEEEETTEEEEECCTTCEECT
T ss_pred cccCcccCCCCCCCCC---CcccCcCCCEEEecCCCcEECC
Confidence 5678899643 24665 4799999999999999999654
No 121
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=71.07 E-value=1.4 Score=45.75 Aligned_cols=34 Identities=24% Similarity=0.727 Sum_probs=27.6
Q ss_pred CccccCCCCCCCCCCCeeec-CCCCcccccC-CCceecC
Q psy9822 185 ENECLNDHHTCDPQSEQCVD-LADGFECVCG-RGYNKSE 221 (380)
Q Consensus 185 ~deC~~g~~~C~~~~g~C~n-~~~g~~C~C~-~Gy~G~~ 221 (380)
+|+|. .++|. ++|+|++ ..++|+|.|+ +||+|..
T Consensus 1 vd~C~--s~PC~-ngG~C~~~~~~~y~C~C~~~G~~G~~ 36 (587)
T 3nt1_A 1 ANPCC--SNPCQ-NRGECMSTGFDQYKCDCTRTGFYGEN 36 (587)
T ss_dssp CCTTT--TCCCC-TTCEEEEEETTEEEEECTTSSEETTT
T ss_pred CCCCC--CCCCC-CCCEeeCCCCCCeEEecCCCCccCCC
Confidence 35674 35787 8899996 5589999999 9999987
No 122
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=70.94 E-value=2.8 Score=34.16 Aligned_cols=14 Identities=29% Similarity=0.831 Sum_probs=7.4
Q ss_pred ccccCCCccccccc
Q psy9822 244 KCQCDFGYVGVNCS 257 (380)
Q Consensus 244 ~C~C~~G~~G~~C~ 257 (380)
+|.|+.||+|..|+
T Consensus 20 ~C~Cp~g~~G~~Ce 33 (122)
T 2fd6_A 20 WCNCPKKFGGQHCE 33 (122)
T ss_dssp EEECCTTEESTTSC
T ss_pred CccCCCCCCCcccc
Confidence 45555555555544
No 123
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=69.53 E-value=1.2 Score=45.73 Aligned_cols=22 Identities=59% Similarity=1.567 Sum_probs=20.4
Q ss_pred CCCCCcccchhhc--CCCCCccCc
Q psy9822 104 RSCSAYTQCSTCL--RHAHCGWCA 125 (380)
Q Consensus 104 ~~Cs~~~~C~~Cl--~~~~CGwC~ 125 (380)
..|+.|.+|.+|| ++|.||||.
T Consensus 479 ~~C~~y~sC~~Cl~arDPyCgWc~ 502 (539)
T 3al9_A 479 ESCEQYTTCGECLSSGDPHCGWCA 502 (539)
T ss_dssp CCGGGCCSHHHHTTSCCTTCEEEG
T ss_pred hhCcCcCCHHHHhcCCCCCCceec
Confidence 4799999999999 789999998
No 124
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=68.08 E-value=2.4 Score=37.48 Aligned_cols=28 Identities=25% Similarity=0.771 Sum_probs=24.0
Q ss_pred CCCCCCCcccCCCCCcccccCCCCCCCCCCCC
Q psy9822 260 CQCNGHADCAGPDKLDVCLRCHNHTKGPQCDK 291 (380)
Q Consensus 260 c~C~~~~~C~~~~~~g~C~~C~~~~~G~~C~~ 291 (380)
..|.+++.|.. ..+| +|.++|+|.+|+.
T Consensus 153 ~~C~ngG~Cv~---P~~C-~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 153 GGCRNGGFCNE---RRIC-ECPDGFHGPHCEG 180 (188)
T ss_dssp TCCCTTCEECT---TSCE-ECCTTCBTTTTCB
T ss_pred CCCCCCCEeCC---CCcc-cCcCCCCCCCCcC
Confidence 46888999985 8899 5999999999975
No 125
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=66.95 E-value=1.1 Score=37.65 Aligned_cols=26 Identities=31% Similarity=0.667 Sum_probs=16.5
Q ss_pred CcccC---CCccccCCCcccccccccCCC
Q psy9822 237 GVCSE---PDKCQCDFGYVGVNCSIQCQC 262 (380)
Q Consensus 237 G~C~~---~~~C~C~~G~~G~~C~~~c~C 262 (380)
|+|++ .+.|+|++||+|..|++.-+|
T Consensus 131 g~C~~~~~~~~c~C~~g~~G~~Ce~~~~c 159 (162)
T 1g1s_A 131 GECLETIGNYTCSCYPGFYGPECEYVRDD 159 (162)
T ss_dssp EEEEECSSSEEEEECTTEESTTSCEECC-
T ss_pred CEEecCCCCceEeCCCCCcCcccccCccc
Confidence 56665 347778888887777754333
No 126
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=66.21 E-value=2 Score=44.09 Aligned_cols=47 Identities=19% Similarity=0.593 Sum_probs=32.2
Q ss_pred CCCCCCcccCCCCCcccccCCCCCC--CCCCCCCCCCccCCCCCCCCCcCCC
Q psy9822 261 QCNGHADCAGPDKLDVCLRCHNHTK--GPQCDKCEPLYVGDPRDNGECVPCS 310 (380)
Q Consensus 261 ~C~~~~~C~~~~~~g~C~~C~~~~~--G~~C~~C~~g~~G~~~~~~~C~~C~ 310 (380)
.|+..+.+.. -.+.|. |..||. +..|+.|.+|||......+.|.+|+
T Consensus 251 ~C~~dG~w~~--p~G~C~-C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP 299 (536)
T 3fl7_A 251 HCAVDGEWLV--PIGQCL-CQAGYEKVEDACQACSPGFFKFEASESPCLECP 299 (536)
T ss_dssp EECTTSCBCC--CBCCCE-ECTTEEEETTEEEECCTTEECCSCCSSCCEECC
T ss_pred EEcCCCCEec--ccCcEe-ccCccccCCceeeecCCCCCcccCCCCccccCC
Confidence 3555555532 257884 888885 6678888898887655556788877
No 127
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=65.55 E-value=1 Score=31.96 Aligned_cols=29 Identities=24% Similarity=0.535 Sum_probs=17.1
Q ss_pred CCCCCCcccC----CCCCcccccCCCCCCCCCCC
Q psy9822 261 QCNGHADCAG----PDKLDVCLRCHNHTKGPQCD 290 (380)
Q Consensus 261 ~C~~~~~C~~----~~~~g~C~~C~~~~~G~~C~ 290 (380)
+|.+.++|.. ....+.|. |.++|+|.+|+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~-C~~Gf~G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCE-CAIGFMGQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEE-ECTTEESSSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeE-CCCCCccCCCc
Confidence 4555666652 12345673 77777777775
No 128
>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R
Probab=62.36 E-value=2.5 Score=35.48 Aligned_cols=27 Identities=26% Similarity=0.581 Sum_probs=19.7
Q ss_pred CCcccccCCCCCC-------CCCCCcCCCCCCCCC
Q psy9822 350 TRARCMHCGNHTT-------GPKCEDCVEGKENRQ 377 (380)
Q Consensus 350 ~~g~C~~C~~g~~-------G~~Ce~C~~Gy~g~~ 377 (380)
.+.+|. |++||. +..|..|++|+|-+.
T Consensus 79 ~dt~C~-C~~G~y~~~g~~~~~~C~~C~~Gtfs~~ 112 (146)
T 2hey_R 79 QDTVCR-CRAGTQPLDSYKPGVDCAPCPPGHFSPG 112 (146)
T ss_dssp BCCEEE-ECTTEEESCSSSTTSSEEECCTTEECCS
T ss_pred CCcccc-CCCCeeeCCCcccCcccccCCCCcccCC
Confidence 456787 887753 446889999998764
No 129
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=61.76 E-value=2.1 Score=40.19 Aligned_cols=21 Identities=43% Similarity=1.077 Sum_probs=15.5
Q ss_pred CCcccCCCccccCCCccccccc
Q psy9822 236 RGVCSEPDKCQCDFGYVGVNCS 257 (380)
Q Consensus 236 ~G~C~~~~~C~C~~G~~G~~C~ 257 (380)
+|+|. -++|+|.+||+|..|+
T Consensus 201 ~G~~~-CG~C~C~~g~~G~~Ce 221 (280)
T 2p26_A 201 KGFLE-CGICRCDTGYIGKNCE 221 (280)
T ss_dssp SEEEE-TTEEEECTTEESTTSC
T ss_pred CCeEC-CCceeCCCCCcCCcce
Confidence 44443 2578999999998886
No 130
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=60.85 E-value=2 Score=43.76 Aligned_cols=21 Identities=43% Similarity=1.377 Sum_probs=18.1
Q ss_pred CCCCcccchhhc--CCC-CCccCc
Q psy9822 105 SCSAYTQCSTCL--RHA-HCGWCA 125 (380)
Q Consensus 105 ~Cs~~~~C~~Cl--~~~-~CGwC~ 125 (380)
.|+.|++|.+|| +++ +||||.
T Consensus 485 ~C~~y~sC~~Cl~a~DPy~CgWc~ 508 (527)
T 4fww_A 485 GCRHFLTCGRCLRAWHFMGCGWCG 508 (527)
T ss_dssp CGGGCCSHHHHHHSCGGGCCEECS
T ss_pred CCCCCCCHHHHhcCCCCCcCcCCC
Confidence 599999999998 456 699986
No 131
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=59.85 E-value=3.8 Score=38.45 Aligned_cols=25 Identities=24% Similarity=0.992 Sum_probs=19.7
Q ss_pred CCCCcc--cchhhcC-CCCCccCcCCCCCC
Q psy9822 105 SCSAYT--QCSTCLR-HAHCGWCALQRDTT 131 (380)
Q Consensus 105 ~Cs~~~--~C~~Cl~-~~~CGwC~~~~~~~ 131 (380)
.|.... +|.+||+ ++.|+||. ++.+
T Consensus 2 ~C~~~~~~sC~eCI~~~p~CaWC~--~~~f 29 (280)
T 2p26_A 2 ECTKFKVSSCRECIESGPGCTWCQ--KLNF 29 (280)
T ss_dssp CCCCSSCCSHHHHHTTCTTCEEEC--CTTC
T ss_pred cccccCCCCHHHHhcCCCCceeec--CcCc
Confidence 355444 9999999 69999999 6655
No 132
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=59.50 E-value=3.9 Score=41.55 Aligned_cols=31 Identities=26% Similarity=0.693 Sum_probs=23.8
Q ss_pred CCCCCCCchhhhcCCCCCCCccceeecCCCCcccCcc
Q psy9822 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPS 79 (380)
Q Consensus 43 ~C~~~~~C~~Cl~~~~~~~~~~~C~Wc~~~~~C~~~~ 79 (380)
.|+.+++|.+||.++. ...|.||+ ++|...+
T Consensus 485 ~C~~y~sC~~Cl~a~D----Py~CgWc~--~~Ct~~~ 515 (527)
T 4fww_A 485 GCRHFLTCGRCLRAWH----FMGCGWCG--NMCGQQK 515 (527)
T ss_dssp CGGGCCSHHHHHHSCG----GGCCEECS--SSEECGG
T ss_pred CCCCCCCHHHHhcCCC----CCcCcCCC--CEeeChh
Confidence 5899999999997752 12499994 7897654
No 133
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=58.50 E-value=2.3 Score=44.85 Aligned_cols=22 Identities=27% Similarity=0.902 Sum_probs=20.4
Q ss_pred CCCCCcccchhhc--CCCCCccCc
Q psy9822 104 RSCSAYTQCSTCL--RHAHCGWCA 125 (380)
Q Consensus 104 ~~Cs~~~~C~~Cl--~~~~CGwC~ 125 (380)
..|+.|.+|.+|| ++|.||||.
T Consensus 480 ~~C~~y~sC~~Cl~arDPyCgW~~ 503 (663)
T 1olz_A 480 AFCGKHGTCEDCVLARDPYCAWSP 503 (663)
T ss_dssp CCGGGCCSHHHHHHTTCTTEEEET
T ss_pred hhCCCCCCHHHHhcCCCCCccccC
Confidence 4799999999999 889999998
No 134
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=57.58 E-value=3.3 Score=28.45 Aligned_cols=18 Identities=28% Similarity=0.851 Sum_probs=15.8
Q ss_pred CCcccccCCCCCCCCCCCc
Q psy9822 350 TRARCMHCGNHTTGPKCED 368 (380)
Q Consensus 350 ~~g~C~~C~~g~~G~~Ce~ 368 (380)
....|. |+++|+|.+||.
T Consensus 28 ~~~~C~-C~~gy~G~RCe~ 45 (50)
T 1iox_A 28 QTPSCV-CDEGYIGARCER 45 (50)
T ss_dssp TEEEEC-CCTTEETTTTCE
T ss_pred CCeEEE-CCCCcccCCCCe
Confidence 457899 999999999985
No 135
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=57.35 E-value=2.7 Score=43.08 Aligned_cols=22 Identities=45% Similarity=1.333 Sum_probs=20.3
Q ss_pred CCCCCcccchhhc--CCCCCccCc
Q psy9822 104 RSCSAYTQCSTCL--RHAHCGWCA 125 (380)
Q Consensus 104 ~~Cs~~~~C~~Cl--~~~~CGwC~ 125 (380)
..|+.|.+|.+|| +++.||||.
T Consensus 464 ~~C~~y~sC~~Cl~ArDPyCgW~~ 487 (528)
T 3ol2_B 464 ASCAQHLDCASCLAHRDPYCGWCV 487 (528)
T ss_dssp CCGGGCCSHHHHHHSCCTTCEEET
T ss_pred hhCcCcCcHhHHhhCCCCCCcccC
Confidence 4799999999999 789999998
No 136
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=53.66 E-value=3 Score=34.65 Aligned_cols=28 Identities=21% Similarity=0.799 Sum_probs=22.6
Q ss_pred CCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 193 HTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 193 ~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
.+|. ..+.|.+....|.|.|.+||.|+.
T Consensus 125 ~pc~-~~g~C~~~~~~~~c~C~~g~~g~~ 152 (157)
T 1g1t_A 125 TSCS-GHGECVETINNYTCKCDPGFSGLK 152 (157)
T ss_dssp TGGG-GSEEEEEETTEEEEEECTTEESTT
T ss_pred CCCC-CCCEeecCCCCeeEECCCCccCcc
Confidence 3565 568898888899999999998876
No 137
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=52.99 E-value=4.9 Score=30.46 Aligned_cols=26 Identities=23% Similarity=0.616 Sum_probs=19.5
Q ss_pred CCCCCCCeee--cCCCCcccccCCCceecC
Q psy9822 194 TCDPQSEQCV--DLADGFECVCGRGYNKSE 221 (380)
Q Consensus 194 ~C~~~~g~C~--n~~~g~~C~C~~Gy~G~~ 221 (380)
.|. +|+|+ ...+.+.|.|.+||+|..
T Consensus 47 yCl--nG~C~~i~~~~~~~C~C~~GYtG~R 74 (79)
T 1xdt_R 47 FCI--HGECKYVKELRAPSCICHPGYHGER 74 (79)
T ss_dssp CCS--SEEECCBGGGTBCCEEECTTEESTT
T ss_pred cCC--CCEeeeecCCCCeEEEcCCCccccc
Confidence 454 45884 344678999999999987
No 138
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=51.23 E-value=14 Score=30.95 Aligned_cols=27 Identities=19% Similarity=0.511 Sum_probs=16.7
Q ss_pred CCCCCCCeeecC--CCCc-ccccCCCceecC
Q psy9822 194 TCDPQSEQCVDL--ADGF-ECVCGRGYNKSE 221 (380)
Q Consensus 194 ~C~~~~g~C~n~--~~g~-~C~C~~Gy~G~~ 221 (380)
+|. ++|+|+.. ...+ .|.|++||.|..
T Consensus 14 pC~-NGGtC~~~~~~s~~~~C~Cp~g~~G~~ 43 (145)
T 2i9a_A 14 DCL-NGGTCVSNKYFSNIHWCNCPKKFGGQH 43 (145)
T ss_dssp CCC-TTCEEEECSSSTTCEEEECCTTEESTT
T ss_pred CCC-CCCCcCCCccccCCccccCCCCCCCCc
Confidence 344 66777664 2444 677777777665
No 139
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=50.98 E-value=3.6 Score=34.49 Aligned_cols=26 Identities=42% Similarity=1.086 Sum_probs=16.8
Q ss_pred Cc-CCcccC---CCccccCCCccccccccc
Q psy9822 234 CV-RGVCSE---PDKCQCDFGYVGVNCSIQ 259 (380)
Q Consensus 234 C~-~G~C~~---~~~C~C~~G~~G~~C~~~ 259 (380)
|. +|+|+. .+.|.|+.||+|..|++.
T Consensus 127 C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 127 CSGHGECVEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp SCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred CCCCCeecccCCCceeeeCCCccccccccc
Confidence 44 466664 347777777777777653
No 140
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=50.50 E-value=4.5 Score=41.48 Aligned_cols=32 Identities=34% Similarity=0.909 Sum_probs=27.8
Q ss_pred CCCCCCCchhhhcCCCCCCCccceeecCCCCcccCcc
Q psy9822 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPS 79 (380)
Q Consensus 43 ~C~~~~~C~~Cl~~~~~~~~~~~C~Wc~~~~~C~~~~ 79 (380)
.|+.+.+|.+||.++. -.|.||...++|...+
T Consensus 480 ~C~~y~sC~~Cl~arD-----PyCgWc~~~~~C~~~~ 511 (539)
T 3al9_A 480 SCEQYTTCGECLSSGD-----PHCGWCALHNMCSRRD 511 (539)
T ss_dssp CGGGCCSHHHHTTSCC-----TTCEEEGGGTEEECGG
T ss_pred hCcCcCCHHHHhcCCC-----CCCceecCCCceechh
Confidence 7889999999998873 5899999999999754
No 141
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=48.57 E-value=3.5 Score=40.46 Aligned_cols=28 Identities=36% Similarity=0.984 Sum_probs=23.4
Q ss_pred CCCCCc-CCcccCCCccccCCCccccc--ccc
Q psy9822 230 CSQGCV-RGVCSEPDKCQCDFGYVGVN--CSI 258 (380)
Q Consensus 230 C~~~C~-~G~C~~~~~C~C~~G~~G~~--C~~ 258 (380)
|++.|. ||.|+. ++|+|+.||+|.. |..
T Consensus 194 Cp~~CsGhG~C~~-g~C~Cd~G~~g~d~~C~~ 224 (387)
T 2ddu_A 194 CPSYCSGHGDCIS-GVCFCDLGYTAAQGTCVS 224 (387)
T ss_dssp CGGGGGGSEEEET-TEEEECTTEEEETTEEEE
T ss_pred CccccCCCceecC-CeEEecCCcccCCCcccc
Confidence 777887 899977 7999999999974 653
No 142
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=43.92 E-value=4.8 Score=40.83 Aligned_cols=27 Identities=30% Similarity=0.904 Sum_probs=0.0
Q ss_pred CCCCCcccchhhcC-CCCCccCcCCCCCCC
Q psy9822 104 RSCSAYTQCSTCLR-HAHCGWCALQRDTTG 132 (380)
Q Consensus 104 ~~Cs~~~~C~~Cl~-~~~CGwC~~~~~~~~ 132 (380)
..|..-.+|.+|++ ++.|+||. +..++
T Consensus 24 ~~C~~~~sC~eCi~~~p~CaWC~--~~~f~ 51 (503)
T 3v4v_B 24 GSCQPAPSCQKCILSHPSCAWCK--QLNFT 51 (503)
T ss_dssp ------------------------------
T ss_pred CcCCCCCCHHHHhCCCCCccccc--CcccC
Confidence 35788899999998 59999999 66664
No 143
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=42.44 E-value=7.7 Score=40.76 Aligned_cols=32 Identities=25% Similarity=0.763 Sum_probs=27.8
Q ss_pred CCCCCCCchhhhcCCCCCCCccceeecCCCCcccCcc
Q psy9822 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPS 79 (380)
Q Consensus 43 ~C~~~~~C~~Cl~~~~~~~~~~~C~Wc~~~~~C~~~~ 79 (380)
.|+.+.+|.+||.++. -.|.||...++|....
T Consensus 481 ~C~~y~sC~~Cl~arD-----PyCgW~~~~~~C~~~~ 512 (663)
T 1olz_A 481 FCGKHGTCEDCVLARD-----PYCAWSPPTATCVALH 512 (663)
T ss_dssp CGGGCCSHHHHHHTTC-----TTEEEETTTTEEEETT
T ss_pred hCCCCCCHHHHhcCCC-----CCccccCCCCceeCcc
Confidence 6889999999998763 5899999999999764
No 144
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=41.11 E-value=8.9 Score=39.18 Aligned_cols=32 Identities=34% Similarity=0.871 Sum_probs=27.9
Q ss_pred CCCCCCCchhhhcCCCCCCCccceeecCCCCcccCcc
Q psy9822 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPS 79 (380)
Q Consensus 43 ~C~~~~~C~~Cl~~~~~~~~~~~C~Wc~~~~~C~~~~ 79 (380)
.|+.+.+|.+||.++. -.|.||...++|...+
T Consensus 465 ~C~~y~sC~~Cl~ArD-----PyCgW~~~~~~Cs~~~ 496 (528)
T 3ol2_B 465 SCAQHLDCASCLAHRD-----PYCGWCVLLGRCSRRS 496 (528)
T ss_dssp CGGGCCSHHHHHHSCC-----TTCEEETTTTEEECGG
T ss_pred hCcCcCcHhHHhhCCC-----CCCcccCCCCeecCHh
Confidence 7889999999998863 5899999999998864
No 145
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=39.93 E-value=7.8 Score=40.77 Aligned_cols=22 Identities=32% Similarity=1.037 Sum_probs=18.9
Q ss_pred CCCCCc-ccchhhc--CCCCCccCc
Q psy9822 104 RSCSAY-TQCSTCL--RHAHCGWCA 125 (380)
Q Consensus 104 ~~Cs~~-~~C~~Cl--~~~~CGwC~ 125 (380)
..|+.| ++|.+|+ ++|.||||.
T Consensus 498 ~~C~~y~~sC~~Cl~ArDPYCGW~~ 522 (667)
T 4gz8_A 498 HRCDIYGKACAECCLARDPYCAWDG 522 (667)
T ss_dssp CCGGGSCSSHHHHHHTCCTTEECCS
T ss_pred hhccCccccHHHHhcCCCCCCCCcc
Confidence 479999 6899997 579999986
No 146
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=39.02 E-value=7.9 Score=40.13 Aligned_cols=22 Identities=41% Similarity=1.103 Sum_probs=19.2
Q ss_pred CCCCCcc-cchhhc--CCCCCccCc
Q psy9822 104 RSCSAYT-QCSTCL--RHAHCGWCA 125 (380)
Q Consensus 104 ~~Cs~~~-~C~~Cl--~~~~CGwC~ 125 (380)
..|+.|. +|.+|| ++|.||||.
T Consensus 447 ~~C~~y~~sC~~Cl~ArDPYCGWc~ 471 (590)
T 3nvq_A 447 DLCEVYGGGCHGCLMSRDPYCGWDQ 471 (590)
T ss_dssp TCCTTCCSHHHHHHHTCCTTEEEET
T ss_pred hhccccccchhHHhcCCCCCCCCcc
Confidence 4799997 899998 679999985
No 147
>3vi3_B Integrin beta-1; beta propeller fold, rossman fold, beta sandwich, fibronecti receptor, cell adhesion-immune system complex; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 3vi4_B*
Probab=38.95 E-value=12 Score=37.59 Aligned_cols=24 Identities=29% Similarity=0.940 Sum_probs=16.8
Q ss_pred CCcccchhhcC-CCCCccCcCCCCCCC
Q psy9822 107 SAYTQCSTCLR-HAHCGWCALQRDTTG 132 (380)
Q Consensus 107 s~~~~C~~Cl~-~~~CGwC~~~~~~~~ 132 (380)
..-.+|.+|++ ++.|+||. +..+.
T Consensus 10 ~~~~sC~eCi~~~p~CaWC~--~~~f~ 34 (454)
T 3vi3_B 10 ANAKSCGECIQAGPNCGWCT--NSTFL 34 (454)
T ss_dssp SCCCSSTTTSTTCSSCCCBC-------
T ss_pred CCCCCHHHHhCCCCCccccC--CcccC
Confidence 55689999998 59999999 66553
No 148
>3nvn_B Plexin-C1; beta-propeller, signaling, viral protein-signaling protein C; HET: NDG NAG; 2.26A {Homo sapiens} PDB: 3nvq_B*
Probab=38.08 E-value=15 Score=36.85 Aligned_cols=32 Identities=28% Similarity=0.913 Sum_probs=27.8
Q ss_pred CCCCCCCchhhhcCCCCCCCccceeecCCCCcccCcc
Q psy9822 43 RCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPS 79 (380)
Q Consensus 43 ~C~~~~~C~~Cl~~~~~~~~~~~C~Wc~~~~~C~~~~ 79 (380)
.|..+++|.+|+.++. -.|.||...++|...+
T Consensus 420 ~C~~y~sC~~Cl~ArD-----PYCGW~~~~~~Csr~~ 451 (476)
T 3nvn_B 420 NCNKHKSCSECLTATD-----PHCGWCHSLQRCTFQG 451 (476)
T ss_dssp CCTTCCSHHHHHTTCC-----TTEEEETTTTEEEEGG
T ss_pred hCcCCCchhHHhhCCC-----CCCcccCCCCccCCHh
Confidence 7888999999998873 5899999999999754
No 149
>3nvn_B Plexin-C1; beta-propeller, signaling, viral protein-signaling protein C; HET: NDG NAG; 2.26A {Homo sapiens} PDB: 3nvq_B*
Probab=36.11 E-value=10 Score=38.12 Aligned_cols=22 Identities=45% Similarity=1.346 Sum_probs=19.5
Q ss_pred CCCCCcccchhhc--CCCCCccCc
Q psy9822 104 RSCSAYTQCSTCL--RHAHCGWCA 125 (380)
Q Consensus 104 ~~Cs~~~~C~~Cl--~~~~CGwC~ 125 (380)
..|+.|.+|.+|| +++.||||.
T Consensus 419 ~~C~~y~sC~~Cl~ArDPYCGW~~ 442 (476)
T 3nvn_B 419 ANCNKHKSCSECLTATDPHCGWCH 442 (476)
T ss_dssp CCCTTCCSHHHHHTTCCTTEEEET
T ss_pred hhCcCCCchhHHhhCCCCCCcccC
Confidence 4788999999998 579999997
No 150
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=35.63 E-value=13 Score=39.08 Aligned_cols=33 Identities=33% Similarity=0.853 Sum_probs=28.5
Q ss_pred CCCCCCCCchhhhcCCCCCCCccceeecCCCCcccCcc
Q psy9822 42 LRCDQRTDCQDCLTSSGGEGGWHECRWSSMLNECISPS 79 (380)
Q Consensus 42 ~~C~~~~~C~~Cl~~~~~~~~~~~C~Wc~~~~~C~~~~ 79 (380)
..|+.+.+|.+||.++. -.|.||...++|....
T Consensus 478 ~~C~~y~sC~~Cl~ArD-----PyCGWc~~~~~Cs~~~ 510 (681)
T 3oky_A 478 ESCEQYTTCGECLSSGD-----PHCGWCALHNMCSRRD 510 (681)
T ss_dssp CCGGGCCSHHHHTTSCC-----TTCEEETTTTEEECGG
T ss_pred hhCcCCCChhHHhcCCC-----CCCceeCCCCeEcChh
Confidence 48899999999999874 5899999889998754
No 151
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=35.07 E-value=11 Score=39.05 Aligned_cols=27 Identities=37% Similarity=0.960 Sum_probs=21.0
Q ss_pred CCCcC-CcccC----CCccccC-CCcccccccc
Q psy9822 232 QGCVR-GVCSE----PDKCQCD-FGYVGVNCSI 258 (380)
Q Consensus 232 ~~C~~-G~C~~----~~~C~C~-~G~~G~~C~~ 258 (380)
++|.| |+|+. .+.|.|+ .||+|.+|+.
T Consensus 7 ~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 7 NPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 45654 78984 3689999 9999999985
No 152
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=34.46 E-value=22 Score=34.31 Aligned_cols=38 Identities=26% Similarity=0.790 Sum_probs=29.3
Q ss_pred CCC-CCccccCCCCCCCCCCCeeecCCCCcccccCC-CceecC
Q psy9822 181 KCP-PENECLNDHHTCDPQSEQCVDLADGFECVCGR-GYNKSE 221 (380)
Q Consensus 181 ~C~-d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~-Gy~G~~ 221 (380)
.|+ ..+.|. ..+|. +.|+|+...++|.|.|+. ||.|..
T Consensus 180 gC~~~~~~C~--~~pC~-n~g~C~~~~~~~~C~C~~~~~~G~~ 219 (410)
T 3asi_A 180 GCEGPSTTCQ--EDSCS-NQGVCLQQWDGFSCDCSMTSFSGPL 219 (410)
T ss_dssp SCCCCSSCCC--TTSSS-TTCEEEECSSSEEEECTTTSEESTT
T ss_pred CCCCCCCCcc--cccCC-CCCEecCCCCCceEeccCCcccCCC
Confidence 453 345663 35787 789999999999999996 999876
No 153
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=32.35 E-value=8.5 Score=39.35 Aligned_cols=29 Identities=17% Similarity=0.477 Sum_probs=23.6
Q ss_pred CCcccccCCCCCC--CCCCCcCCCCCCCCCCC
Q psy9822 350 TRARCMHCGNHTT--GPKCEDCVEGKENRQSR 379 (380)
Q Consensus 350 ~~g~C~~C~~g~~--G~~Ce~C~~Gy~g~~~~ 379 (380)
-.|+|+ |++||+ |..|+.|++|||....+
T Consensus 261 p~G~C~-C~~G~e~~~~~C~aC~~g~~k~~~~ 291 (536)
T 3fl7_A 261 PIGQCL-CQAGYEKVEDACQACSPGFFKFEAS 291 (536)
T ss_dssp CBCCCE-ECTTEEEETTEEEECCTTEECCSCC
T ss_pred ccCcEe-ccCccccCCceeeecCCCCCcccCC
Confidence 358999 999998 66799999999976543
No 154
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=32.28 E-value=20 Score=37.12 Aligned_cols=42 Identities=26% Similarity=0.690 Sum_probs=30.4
Q ss_pred CCCccccCCCCCCCCCCCeeecCC-CCcccccCCCceecCCCCCcc
Q psy9822 183 PPENECLNDHHTCDPQSEQCVDLA-DGFECVCGRGYNKSEEGGECV 227 (380)
Q Consensus 183 ~d~deC~~g~~~C~~~~g~C~n~~-~g~~C~C~~Gy~G~~~~~~C~ 227 (380)
+.+|+|......|. ..|++.+ ++|+|.|++||........|.
T Consensus 263 ~~~n~C~~~ng~C~---~~C~~~~~~~~~C~C~~g~~l~~d~~~C~ 305 (628)
T 4a0p_A 263 SGWNECASSNGHCS---HLCLAVPVGGFVCGCPAHYSLNADNRTCS 305 (628)
T ss_dssp CCCCTTTTTGGGCS---SEEEEETTTEEEEECSTTCEECTTSSCEE
T ss_pred ccceEeccCCCCcc---hhhhcCCCCCeeEEcCCCcEecccCCcCc
Confidence 46788865444665 3799988 899999999998754333454
No 155
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=32.03 E-value=29 Score=31.96 Aligned_cols=35 Identities=23% Similarity=0.502 Sum_probs=24.4
Q ss_pred CCccccCC---CCCCCCCCCeeecCC------CCcccccCCCceecC
Q psy9822 184 PENECLND---HHTCDPQSEQCVDLA------DGFECVCGRGYNKSE 221 (380)
Q Consensus 184 d~deC~~g---~~~C~~~~g~C~n~~------~g~~C~C~~Gy~G~~ 221 (380)
..++|... ...|. ..|++.+ ++|+|.|+.||....
T Consensus 266 ~~n~C~~~~~~ng~Cs---~~C~~~p~~~~~~~~~~C~C~~g~~l~~ 309 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQ---YLCLPAPQINPHSPKFTCACPDGMLLAR 309 (316)
T ss_dssp CCCTTSSSSSGGGGCS---SEEEECCCCSTTCCSEEEECCTTCEECT
T ss_pred ccccccccccCCCCcC---cccCCCccccCCCCCeEeeCCCCCEECC
Confidence 56677543 33564 3788775 589999999998654
No 156
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=31.59 E-value=24 Score=36.09 Aligned_cols=35 Identities=23% Similarity=0.582 Sum_probs=27.1
Q ss_pred ccccCCC-CCCCCCCCeeecCC-CCcccccCCCceecC
Q psy9822 186 NECLNDH-HTCDPQSEQCVDLA-DGFECVCGRGYNKSE 221 (380)
Q Consensus 186 deC~~g~-~~C~~~~g~C~n~~-~g~~C~C~~Gy~G~~ 221 (380)
+.|.++. ++|+ .++.|+.+. +.|.|+|+.||.|.+
T Consensus 19 ~~c~~~~~~~c~-~~a~C~~~~~~~~~c~C~~G~ag~G 55 (551)
T 3fby_A 19 RFCPDGSPSECH-EHADCVLERDGSRSCVCAVGWAGNG 55 (551)
T ss_dssp CBCTTSSBCCCC-TTEEEEECTTSCEEEEECTTEESSS
T ss_pred ccCCCCCCCCCC-CCCeeEeCCCCCEecCCCCCCCCCC
Confidence 3454544 6898 889999865 467999999999987
No 157
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=31.45 E-value=7.9 Score=31.93 Aligned_cols=22 Identities=41% Similarity=1.064 Sum_probs=13.1
Q ss_pred CcccC---CCccccCCCcccccccc
Q psy9822 237 GVCSE---PDKCQCDFGYVGVNCSI 258 (380)
Q Consensus 237 G~C~~---~~~C~C~~G~~G~~C~~ 258 (380)
|.|.. .+.|.|..||+|..|++
T Consensus 131 g~C~~~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 131 GECVETINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp EEEEEETTEEEEEECTTEESTTSCE
T ss_pred CEeecCCCCeeEECCCCccCccccc
Confidence 55544 34666666666666653
No 158
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=31.26 E-value=15 Score=37.59 Aligned_cols=31 Identities=23% Similarity=0.509 Sum_probs=20.2
Q ss_pred CCCCCCCcccC-CCCCcccccCC-CCCCCCCCCC
Q psy9822 260 CQCNGHADCAG-PDKLDVCLRCH-NHTKGPQCDK 291 (380)
Q Consensus 260 c~C~~~~~C~~-~~~~g~C~~C~-~~~~G~~C~~ 291 (380)
.+|.++++|.+ ..+.+.|. |. .+|+|..|+.
T Consensus 8 ~PC~ngG~C~~~~~~~y~C~-C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 8 YPCQHQGICVRFGLDRYQCD-CTRTGYSGPNCTI 40 (553)
T ss_dssp CCCCTTCEEEEETTTEEEEE-CTTSSEETTTTCE
T ss_pred CCCCCCCCcCCCCCCceEee-CCCCCcCCCCCCC
Confidence 45666666765 55567774 77 7777777763
No 159
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=29.91 E-value=14 Score=37.97 Aligned_cols=22 Identities=36% Similarity=1.081 Sum_probs=19.4
Q ss_pred CCCCCcccch-hhc--CCCCCccCc
Q psy9822 104 RSCSAYTQCS-TCL--RHAHCGWCA 125 (380)
Q Consensus 104 ~~Cs~~~~C~-~Cl--~~~~CGwC~ 125 (380)
..|+.|.+|. +|| ++|.||||.
T Consensus 498 ~~C~~y~sC~~~Cl~ArDPYCGW~~ 522 (565)
T 3oky_B 498 GRCERHGKCKKTCIASRDPYCGWVR 522 (565)
T ss_dssp CCCGGGTTCHHHHHHTCCTTEEEET
T ss_pred hhCcCcccchhhhhhcCCCCCcccC
Confidence 4799999999 895 679999997
No 160
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=29.65 E-value=19 Score=37.02 Aligned_cols=34 Identities=26% Similarity=0.682 Sum_probs=28.5
Q ss_pred CCCCCCCCch-hhhcCCCCCCCccceeecCCCCcccCccc
Q psy9822 42 LRCDQRTDCQ-DCLTSSGGEGGWHECRWSSMLNECISPSY 80 (380)
Q Consensus 42 ~~C~~~~~C~-~Cl~~~~~~~~~~~C~Wc~~~~~C~~~~~ 80 (380)
..|+.+.+|. +||.++. -.|.||....+|+....
T Consensus 498 ~~C~~y~sC~~~Cl~ArD-----PYCGW~~~~~~C~~~~~ 532 (565)
T 3oky_B 498 GRCERHGKCKKTCIASRD-----PYCGWVRESGSCAHLSP 532 (565)
T ss_dssp CCCGGGTTCHHHHHHTCC-----TTEEEETTTTEEEECCT
T ss_pred hhCcCcccchhhhhhcCC-----CCCcccCCCCceeeccC
Confidence 6788999999 8987763 58999999999998653
No 161
>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}
Probab=29.50 E-value=45 Score=28.56 Aligned_cols=15 Identities=27% Similarity=0.499 Sum_probs=3.5
Q ss_pred CCCCCCcCCCCCCCC
Q psy9822 362 TGPKCEDCVEGKENR 376 (380)
Q Consensus 362 ~G~~Ce~C~~Gy~g~ 376 (380)
....|+.|.+|||-+
T Consensus 119 ~dt~C~~C~~Gtfs~ 133 (177)
T 3qd6_R 119 SDTICEPCPVGFFSN 133 (177)
T ss_dssp CCCCCCC--------
T ss_pred CCCccccCCCCcccC
Confidence 344555666666654
No 162
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=26.83 E-value=13 Score=30.89 Aligned_cols=23 Identities=17% Similarity=0.417 Sum_probs=10.9
Q ss_pred CCCCCCCCccCCCCCC-CCCcCCC
Q psy9822 288 QCDKCEPLYVGDPRDN-GECVPCS 310 (380)
Q Consensus 288 ~C~~C~~g~~G~~~~~-~~C~~C~ 310 (380)
.|..|.+|+|-+..+. ..|.+|.
T Consensus 37 ~C~pC~~gty~~~~n~~~~C~~C~ 60 (142)
T 2uwi_A 37 ICGHCPSDTFTSIYNRSPWCHSCR 60 (142)
T ss_dssp EEEECCTTEECCSSBCCSSCEECC
T ss_pred ccCcCCCCCCcccCCCCCccCCCc
Confidence 3445555555444332 2455554
No 163
>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*
Probab=26.37 E-value=31 Score=29.34 Aligned_cols=14 Identities=21% Similarity=0.622 Sum_probs=0.0
Q ss_pred CCCCcCCCCCCCCC
Q psy9822 364 PKCEDCVEGKENRQ 377 (380)
Q Consensus 364 ~~Ce~C~~Gy~g~~ 377 (380)
..|..|++|+|-+.
T Consensus 122 t~C~~C~~Gtfs~~ 135 (167)
T 1jma_B 122 TLCQNCPPGTFSPN 135 (167)
T ss_dssp --------------
T ss_pred CccccCCCCceeCC
Confidence 44778888888654
No 164
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=26.04 E-value=14 Score=37.41 Aligned_cols=26 Identities=31% Similarity=0.800 Sum_probs=0.0
Q ss_pred CCCCCCCCCchhhhcCCCCCCCccceeecCCC
Q psy9822 41 PLRCDQRTDCQDCLTSSGGEGGWHECRWSSML 72 (380)
Q Consensus 41 p~~C~~~~~C~~Cl~~~~~~~~~~~C~Wc~~~ 72 (380)
+.+|...++|.+|+... ..|+||...
T Consensus 23 ~~~C~~~~sC~eCi~~~------p~CaWC~~~ 48 (503)
T 3v4v_B 23 LGSCQPAPSCQKCILSH------PSCAWCKQL 48 (503)
T ss_dssp --------------------------------
T ss_pred cCcCCCCCCHHHHhCCC------CCcccccCc
Confidence 44568889999999974 379999864
No 165
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=25.28 E-value=29 Score=29.00 Aligned_cols=14 Identities=29% Similarity=0.831 Sum_probs=8.5
Q ss_pred ccccCCCccccccc
Q psy9822 244 KCQCDFGYVGVNCS 257 (380)
Q Consensus 244 ~C~C~~G~~G~~C~ 257 (380)
+|.|+.||.|..|+
T Consensus 32 ~C~Cp~g~~G~~Ce 45 (145)
T 2i9a_A 32 WCNCPKKFGGQHCE 45 (145)
T ss_dssp EEECCTTEESTTSC
T ss_pred cccCCCCCCCCcee
Confidence 56666666666544
No 166
>1n8y_C Protooncoprotein; tyrosin kinase receptor, cell surface receptor, transferase; HET: NAG; 2.40A {Rattus norvegicus} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 1n8z_C* 3be1_A* 1s78_A* 3mzw_A* 3n85_A* 2a91_A* 3h3b_A
Probab=21.03 E-value=25 Score=36.44 Aligned_cols=26 Identities=19% Similarity=0.599 Sum_probs=19.1
Q ss_pred CcccccCCCCCCCCCCC-cCCCCCCCC
Q psy9822 351 RARCMHCGNHTTGPKCE-DCVEGKENR 376 (380)
Q Consensus 351 ~g~C~~C~~g~~G~~Ce-~C~~Gy~g~ 376 (380)
...|+.|++...+..|- +|++|||++
T Consensus 560 ~~~C~~C~~~~~~g~Cv~~CP~g~~~~ 586 (608)
T 1n8y_C 560 ADQCAACAHYKDSSSCVARCPSGVKPD 586 (608)
T ss_dssp GGGBSSBSSEEETTEEESSCCEEECCT
T ss_pred CCCCccccccCcCCeEcccCCCCcccc
Confidence 35677787766677774 699999876
No 167
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=20.85 E-value=21 Score=33.54 Aligned_cols=24 Identities=29% Similarity=0.551 Sum_probs=15.3
Q ss_pred CCCCCCcccCCCCCcccccCCCCCC
Q psy9822 261 QCNGHADCAGPDKLDVCLRCHNHTK 285 (380)
Q Consensus 261 ~C~~~~~C~~~~~~g~C~~C~~~~~ 285 (380)
.|..++.|.+..+++.|. |+++|.
T Consensus 14 ~C~~~a~C~Nt~Gsy~C~-C~~Gy~ 37 (285)
T 1gl4_A 14 QCSVHAECRDYATGFCCR-CVANYT 37 (285)
T ss_dssp GSCTTEEEEECSSCEEEE-ECTTEE
T ss_pred CCCCCCEeEcCCCCeEEE-cCCCCC
Confidence 455666777777777773 555554
No 168
>3vi3_B Integrin beta-1; beta propeller fold, rossman fold, beta sandwich, fibronecti receptor, cell adhesion-immune system complex; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 3vi4_B*
Probab=20.83 E-value=36 Score=34.04 Aligned_cols=22 Identities=18% Similarity=0.776 Sum_probs=16.5
Q ss_pred CCCCCchhhhcCCCCCCCccceeecCCC
Q psy9822 45 DQRTDCQDCLTSSGGEGGWHECRWSSML 72 (380)
Q Consensus 45 ~~~~~C~~Cl~~~~~~~~~~~C~Wc~~~ 72 (380)
...++|.+|+... ..|+||...
T Consensus 10 ~~~~sC~eCi~~~------p~CaWC~~~ 31 (454)
T 3vi3_B 10 ANAKSCGECIQAG------PNCGWCTNS 31 (454)
T ss_dssp SCCCSSTTTSTTC------SSCCCBC--
T ss_pred CCCCCHHHHhCCC------CCccccCCc
Confidence 4568999999974 379999865
No 169
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=20.36 E-value=33 Score=35.48 Aligned_cols=31 Identities=32% Similarity=0.743 Sum_probs=25.5
Q ss_pred CCCCCCC-CchhhhcCCCCCCCccceeecCCCCcccCcc
Q psy9822 42 LRCDQRT-DCQDCLTSSGGEGGWHECRWSSMLNECISPS 79 (380)
Q Consensus 42 ~~C~~~~-~C~~Cl~~~~~~~~~~~C~Wc~~~~~C~~~~ 79 (380)
..|+.+. +|.+||.++. -.|.||. ++|....
T Consensus 447 ~~C~~y~~sC~~Cl~ArD-----PYCGWc~--~~C~~~~ 478 (590)
T 3nvq_A 447 DLCEVYGGGCHGCLMSRD-----PYCGWDQ--GRCISIY 478 (590)
T ss_dssp TCCTTCCSHHHHHHHTCC-----TTEEEET--TEEEETT
T ss_pred hhccccccchhHHhcCCC-----CCCCCcc--ccceecC
Confidence 6788997 8999998863 5899995 8998764
No 170
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=20.26 E-value=39 Score=34.82 Aligned_cols=35 Identities=23% Similarity=0.684 Sum_probs=25.7
Q ss_pred CCccccCCCCCCCCCCCeeecCCCCcccccCCCceecC
Q psy9822 184 PENECLNDHHTCDPQSEQCVDLADGFECVCGRGYNKSE 221 (380)
Q Consensus 184 d~deC~~g~~~C~~~~g~C~n~~~g~~C~C~~Gy~G~~ 221 (380)
..++|......|. ..|++.+++++|.|+.||....
T Consensus 577 ~~~~C~~~ng~C~---~~C~~~~~~~~C~C~~g~~l~~ 611 (619)
T 3s94_A 577 GSNPCAEENGGCS---HLCLYRPQGLRCACPIGFELIS 611 (619)
T ss_dssp CCCGGGSGGGGCS---SEEEEETTEEEEECCTTCEECS
T ss_pred ccccCCCCCCChh---HhhccCCCCeEEECCCCCEECC
Confidence 4566754444564 3789999999999999998654
Done!